BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006641
(637 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356576101|ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
max]
Length = 652
Score = 958 bits (2476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/645 (73%), Positives = 546/645 (84%), Gaps = 12/645 (1%)
Query: 3 ATGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRD 62
A AAA V + A + N SLYVGDLE NVNE QLYDLFSQVAQ+ S+RVCRD
Sbjct: 10 AQSVAAAATPVIAPGVALGGGPFANASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRD 69
Query: 63 QSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKN 122
Q+KRSSLGYAYVN++N QDA+NA E LNF P+NGKPIRIM+S RDPSIRKSG+GNVFIKN
Sbjct: 70 QTKRSSLGYAYVNFANAQDASNAMELLNFTPLNGKPIRIMFSQRDPSIRKSGHGNVFIKN 129
Query: 123 LDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIN 182
LDTSIDNKAL DTFAAFGTVLSCKVA+DS+GQSKGYGFVQF+NEEAAQNAIK LNGMLIN
Sbjct: 130 LDTSIDNKALHDTFAAFGTVLSCKVALDSSGQSKGYGFVQFDNEEAAQNAIKRLNGMLIN 189
Query: 183 DKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
DKQVYVGLF+RRQER Q N SPKFTNVYV NL+ET TDEDLKK+FG +GTITSA VMKD
Sbjct: 190 DKQVYVGLFIRRQEREQTNGSPKFTNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDV 249
Query: 243 DGKSRCFGFVNFQSPDAAAAAVEKLNGTT-NNDKVWYVGRAQKRAEREADLRAKFEQERI 301
+GKSRCFGFVNFQ+PD+AAAAVE+LNGTT NND+V YVGRAQ++AEREA+L+AK EQERI
Sbjct: 250 NGKSRCFGFVNFQNPDSAAAAVERLNGTTINNDRVLYVGRAQRKAEREAELKAKIEQERI 309
Query: 302 SRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPE 361
SRYEKL+GANLYLKNLDDS +DEKLK+LFSEFGTITSCKVM+D +G SKGSGF +FS PE
Sbjct: 310 SRYEKLQGANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTPE 369
Query: 362 EATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHG 421
EA++ALNEMNGK+IGRKPLYVAVAQRKEERKA LQAQFAQIRAPGGM+PL +GIP YH G
Sbjct: 370 EASKALNEMNGKLIGRKPLYVAVAQRKEERKAHLQAQFAQIRAPGGMAPLPAGIPLYHPG 429
Query: 422 APRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPG-GPNYIMPYHLQRQVHPGQRT 480
APRL PQQLYYGQGTPG MPPQ AG+ FQQQ+ PG+RPG PN+IMPYHLQRQ GQRT
Sbjct: 430 APRLAPQQLYYGQGTPGFMPPQPAGFSFQQQILPGMRPGVAPNFIMPYHLQRQGQLGQRT 489
Query: 481 GVRRSGNTHQMQQPQFM-RNSNQGIRYLDNARNGTDQSVV------SMVPVPFEVSGMPA 533
GVRR+GN Q+QQ Q + RNSNQG RY+ N RNG D S+V M+P+PF+ SG+ A
Sbjct: 490 GVRRNGNFQQVQQNQMLHRNSNQGFRYMPNGRNGMDPSLVPHGLMGPMMPMPFDGSGVTA 549
Query: 534 TPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEP-VHASKVTGMLLEMD 592
P + RP + +TL SALASA+P+++ MLGE LYPLVE + P + +KVTGMLLEMD
Sbjct: 550 APNDNQRPGALS-TTLASALASATPENQRMMLGEHLYPLVERLAPNQYTAKVTGMLLEMD 608
Query: 593 QTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLAVNE 637
Q+EV++LIESPE LKTKV+EAM VL E A+ S+V ++LGS+++NE
Sbjct: 609 QSEVINLIESPEDLKTKVSEAMQVLHEVASGSEV-DQLGSMSLNE 652
>gi|297739370|emb|CBI29360.3| unnamed protein product [Vitis vinifera]
Length = 633
Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/636 (72%), Positives = 533/636 (83%), Gaps = 14/636 (2%)
Query: 13 VTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYA 72
+T T AA G+ N SLYVGDL+ + E QLYDLF QVA V+S+RVCRDQ++R+SLGYA
Sbjct: 1 MTGHTAAA---GFANASLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYA 57
Query: 73 YVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKAL 132
YVN+++PQDA NA E LNF P+NGKPIRIM+SHRDPSIRKSG+ NVFIKNLD SIDNKAL
Sbjct: 58 YVNFASPQDATNALEHLNFTPLNGKPIRIMFSHRDPSIRKSGFANVFIKNLDPSIDNKAL 117
Query: 133 CDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFV 192
DTFAAFGTVLSCK+A+D+NGQSKGYGFVQFE EEAAQNAIK LNGMLINDKQVYVGLFV
Sbjct: 118 LDTFAAFGTVLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFV 177
Query: 193 RRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFV 252
R QER + N SPKFTNVYV NL+ET TD+DLK IFG +G+ITSA+VM+D+ G S+CFGFV
Sbjct: 178 RHQERNRGNGSPKFTNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFV 237
Query: 253 NFQSPDAAAAAVEKLNGTT-NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGAN 311
NFQS D+AAAAVE LNG T N+DKVWYVG+AQ+++EREA+LRAKFEQER +++EK KG N
Sbjct: 238 NFQSSDSAAAAVEHLNGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGTN 297
Query: 312 LYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMN 371
LYLKNLDDS+NDEKLKELFSEFGTITSCKVM+D G SKGSGF AF PEEATRALN MN
Sbjct: 298 LYLKNLDDSVNDEKLKELFSEFGTITSCKVMLDPQGLSKGSGFVAFLTPEEATRALNVMN 357
Query: 372 GKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLY 431
GKMIGRKPLYVAVAQRKEERKARLQAQFAQIR+PG M+PL SG+PG+H GAPRL PQQLY
Sbjct: 358 GKMIGRKPLYVAVAQRKEERKARLQAQFAQIRSPGAMTPLQSGVPGFHSGAPRLAPQQLY 417
Query: 432 YGQGTPGLMPPQAAGYGFQQQVFPGLRPG-GPNYIMPYHLQRQVHPGQRTGVRRSGNT-- 488
+GQGTPGL+P Q AGYGFQQQ+ PG+RPG PN+IMPY LQRQ PGQR GVRR GN+
Sbjct: 418 FGQGTPGLIPTQPAGYGFQQQLMPGMRPGVAPNFIMPYQLQRQGQPGQRMGVRRGGNSQQ 477
Query: 489 -HQMQQPQFMRNSNQGIRYLDNARNGTDQSVV------SMVPVPFEVSGMPATPVETPRP 541
QQP RNSNQ RY+ N RNG D S+V ++P+PF+VSGMP +P++ R
Sbjct: 478 MQHQQQPLLHRNSNQSYRYMANGRNGVDPSMVPQGLMGPVMPLPFDVSGMPVSPMDIQRT 537
Query: 542 VPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIE 601
PVP+STL SALAS +PD++ MLGEQL+PLVE IE A KVTGMLLEMDQTEVLHLIE
Sbjct: 538 GPVPMSTLASALASTTPDNQRLMLGEQLFPLVERIERETAGKVTGMLLEMDQTEVLHLIE 597
Query: 602 SPEALKTKVAEAMAVLQEAAARSDVNEKLGSLAVNE 637
SP+ALK KVAEAM VL+ +++ +DV ++LGSL +NE
Sbjct: 598 SPDALKNKVAEAMDVLRASSSGNDVGDQLGSLMLNE 633
>gi|359495203|ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
[Vitis vinifera]
Length = 1093
Score = 944 bits (2441), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/624 (73%), Positives = 527/624 (84%), Gaps = 11/624 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ N SLYVGDL+ + E QLYDLF QVA V+S+RVCRDQ++R+SLGYAYVN+++PQDA N
Sbjct: 470 FANASLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYAYVNFASPQDATN 529
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A E LNF P+NGKPIRIM+SHRDPSIRKSG+ NVFIKNLD SIDNKAL DTFAAFGTVLS
Sbjct: 530 ALEHLNFTPLNGKPIRIMFSHRDPSIRKSGFANVFIKNLDPSIDNKALLDTFAAFGTVLS 589
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CK+A+D+NGQSKGYGFVQFE EEAAQNAIK LNGMLINDKQVYVGLFVR QER + N SP
Sbjct: 590 CKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFVRHQERNRGNGSP 649
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
KFTNVYV NL+ET TD+DLK IFG +G+ITSA+VM+D+ G S+CFGFVNFQS D+AAAAV
Sbjct: 650 KFTNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFVNFQSSDSAAAAV 709
Query: 265 EKLNGTT-NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIND 323
E LNG T N+DKVWYVG+AQ+++EREA+LRAKFEQER +++EK KG NLYLKNLDDS+ND
Sbjct: 710 EHLNGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGTNLYLKNLDDSVND 769
Query: 324 EKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVA 383
EKLKELFSEFGTITSCKVM+D G SKGSGF AF PEEATRALN MNGKMIGRKPLYVA
Sbjct: 770 EKLKELFSEFGTITSCKVMLDPQGLSKGSGFVAFLTPEEATRALNVMNGKMIGRKPLYVA 829
Query: 384 VAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQ 443
VAQRKEERKARLQAQFAQIR+PG M+PL SG+PG+H GAPRL PQQLY+GQGTPGL+P Q
Sbjct: 830 VAQRKEERKARLQAQFAQIRSPGAMTPLQSGVPGFHSGAPRLAPQQLYFGQGTPGLIPTQ 889
Query: 444 AAGYGFQQQVFPGLRPG-GPNYIMPYHLQRQVHPGQRTGVRRSGNT---HQMQQPQFMRN 499
AGYGFQQQ+ PG+RPG PN+IMPY LQRQ PGQR GVRR GN+ QQP RN
Sbjct: 890 PAGYGFQQQLMPGMRPGVAPNFIMPYQLQRQGQPGQRMGVRRGGNSQQMQHQQQPLLHRN 949
Query: 500 SNQGIRYLDNARNGTDQSVV------SMVPVPFEVSGMPATPVETPRPVPVPISTLTSAL 553
SNQ RY+ N RNG D S+V ++P+PF+VSGMP +P++ R PVP+STL SAL
Sbjct: 950 SNQSYRYMANGRNGVDPSMVPQGLMGPVMPLPFDVSGMPVSPMDIQRTGPVPMSTLASAL 1009
Query: 554 ASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEA 613
AS +PD++ MLGEQL+PLVE IE A KVTGMLLEMDQTEVLHLIESP+ALK KVAEA
Sbjct: 1010 ASTTPDNQRLMLGEQLFPLVERIERETAGKVTGMLLEMDQTEVLHLIESPDALKNKVAEA 1069
Query: 614 MAVLQEAAARSDVNEKLGSLAVNE 637
M VL+ +++ +DV ++LGSL +NE
Sbjct: 1070 MDVLRASSSGNDVGDQLGSLMLNE 1093
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 306 KLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEEAT 364
+ A+LY+ +LD +I + +L +LF + + S +V DQ S G + F+ P++AT
Sbjct: 469 RFANASLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYAYVNFASPQDAT 528
Query: 365 RALNEMNGKMIGRKPLYVAVAQR 387
AL +N + KP+ + + R
Sbjct: 529 NALEHLNFTPLNGKPIRIMFSHR 551
>gi|255572313|ref|XP_002527095.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223533518|gb|EEF35258.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 657
Score = 942 bits (2434), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/623 (74%), Positives = 534/623 (85%), Gaps = 17/623 (2%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ N+SLYVGDLEQNVNE QLYDLFSQ+AQVVSVRVCRDQ+KRSSLGY YVN+SNPQDAAN
Sbjct: 42 FANLSLYVGDLEQNVNEEQLYDLFSQIAQVVSVRVCRDQTKRSSLGYGYVNFSNPQDAAN 101
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A +ALNF P+NGKPIRIM+SHRDPSIRKSGYGNVFIKNLD+++DNK L +TFAAFGTVLS
Sbjct: 102 AMKALNFTPLNGKPIRIMFSHRDPSIRKSGYGNVFIKNLDSTLDNKLLHETFAAFGTVLS 161
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA+DSNGQSKGYGFVQFENEE+A+ AI L+GM +NDKQVYVG FVR+QER + N SP
Sbjct: 162 CKVAVDSNGQSKGYGFVQFENEESAERAISFLDGMCLNDKQVYVGFFVRQQERTRTNGSP 221
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
KFTNVYV NL+ET+T+EDL+K+FG +GTITSA+VMKD GKSR FGFVNFQ PD+AAAAV
Sbjct: 222 KFTNVYVKNLSETITNEDLEKVFGVYGTITSALVMKDQTGKSRGFGFVNFQDPDSAAAAV 281
Query: 265 EKLNGTT-NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIND 323
EKLNGTT ++DK WYVGRAQ+++EREA+L+AKFEQER SRYE+LK ANLYLKNLDD+IND
Sbjct: 282 EKLNGTTAHDDKAWYVGRAQRKSEREAELKAKFEQERNSRYERLKAANLYLKNLDDNIND 341
Query: 324 EKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVA 383
KLKELFSEFG+ITSCKVM+D G SKGSGF AFS PEEA+RAL EMNGKMIGRKPLYVA
Sbjct: 342 VKLKELFSEFGSITSCKVMLDHQGVSKGSGFVAFSTPEEASRALKEMNGKMIGRKPLYVA 401
Query: 384 VAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQ 443
+AQRKEERKARLQA FA +RAPG ++PL SGIPGY+ GAPRL PQQLY+GQGTPG+MPPQ
Sbjct: 402 IAQRKEERKARLQAHFALVRAPGALAPLPSGIPGYNAGAPRLAPQQLYFGQGTPGMMPPQ 461
Query: 444 AAGYGFQQQVFPGLRPG-GPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFM--RNS 500
AGYGFQQQ+ +RP GPN+I+PYHLQRQ PGQR G+RR GN QMQQ Q + RN+
Sbjct: 462 HAGYGFQQQILTSMRPAVGPNFIIPYHLQRQGQPGQRMGMRRGGNPQQMQQQQQLLHRNN 521
Query: 501 NQGIRYLDNARNGTDQSVV------SMVPVPFEVSGMPATPVETPRPVPVPISTLTSALA 554
NQG+RY+ NARN + SVV MVP+PFEVSG A+ P PV ISTL SALA
Sbjct: 522 NQGLRYVGNARNSGNSSVVPQGLAGPMVPLPFEVSG--ASVDVQP---PVTISTLASALA 576
Query: 555 SASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAM 614
SA+P+ RT MLG+ LYPLVE ++P H +KVTGMLLEMDQTEVLHLIESP++LK KVAEAM
Sbjct: 577 SATPEKRTEMLGDHLYPLVERLQPDHVAKVTGMLLEMDQTEVLHLIESPDSLKKKVAEAM 636
Query: 615 AVLQEAAARSDVNEKLGSLAVNE 637
VL+EA A +V ++LGSL +NE
Sbjct: 637 QVLREATA--NVGDQLGSLVLNE 657
>gi|356576103|ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
max]
Length = 642
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/627 (74%), Positives = 531/627 (84%), Gaps = 12/627 (1%)
Query: 3 ATGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRD 62
A AAA V + A + N SLYVGDLE NVNE QLYDLFSQVAQ+ S+RVCRD
Sbjct: 10 AQSVAAAATPVIAPGVALGGGPFANASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRD 69
Query: 63 QSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKN 122
Q+KRSSLGYAYVN++N QDA+NA E LNF P+NGKPIRIM+S RDPSIRKSG+GNVFIKN
Sbjct: 70 QTKRSSLGYAYVNFANAQDASNAMELLNFTPLNGKPIRIMFSQRDPSIRKSGHGNVFIKN 129
Query: 123 LDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIN 182
LDTSIDNKAL DTFAAFGTVLSCKVA+DS+GQSKGYGFVQF+NEEAAQNAIK LNGMLIN
Sbjct: 130 LDTSIDNKALHDTFAAFGTVLSCKVALDSSGQSKGYGFVQFDNEEAAQNAIKRLNGMLIN 189
Query: 183 DKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
DKQVYVGLF+RRQER Q N SPKFTNVYV NL+ET TDEDLKK+FG +GTITSA VMKD
Sbjct: 190 DKQVYVGLFIRRQEREQTNGSPKFTNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDV 249
Query: 243 DGKSRCFGFVNFQSPDAAAAAVEKLNGTT-NNDKVWYVGRAQKRAEREADLRAKFEQERI 301
+GKSRCFGFVNFQ+PD+AAAAVE+LNGTT NND+V YVGRAQ++AEREA+L+AK EQERI
Sbjct: 250 NGKSRCFGFVNFQNPDSAAAAVERLNGTTINNDRVLYVGRAQRKAEREAELKAKIEQERI 309
Query: 302 SRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPE 361
SRYEKL+GANLYLKNLDDS +DEKLK+LFSEFGTITSCKVM+D +G SKGSGF +FS PE
Sbjct: 310 SRYEKLQGANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTPE 369
Query: 362 EATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHG 421
EA++ALNEMNGK+IGRKPLYVAVAQRKEERKA LQAQFAQIRAPGGM+PL +GIP YH G
Sbjct: 370 EASKALNEMNGKLIGRKPLYVAVAQRKEERKAHLQAQFAQIRAPGGMAPLPAGIPLYHPG 429
Query: 422 APRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPG-GPNYIMPYHLQRQVHPGQRT 480
APRL PQQLYYGQGTPG MPPQ AG+ FQQQ+ PG+RPG PN+IMPYHLQRQ GQRT
Sbjct: 430 APRLAPQQLYYGQGTPGFMPPQPAGFSFQQQILPGMRPGVAPNFIMPYHLQRQGQLGQRT 489
Query: 481 GVRRSGNTHQMQQPQFM--RNSNQGIRYLDNARNGTDQSVV------SMVPVPFEVSGMP 532
GVRR+GN Q+QQ Q M RNSNQG RY+ N RNG D S+V M+P+PF+ SG+
Sbjct: 490 GVRRNGNFQQVQQNQQMLHRNSNQGFRYMPNGRNGMDPSLVPHGLMGPMMPMPFDGSGVT 549
Query: 533 ATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEP-VHASKVTGMLLEM 591
A P + RP + +TL SALASA+P+++ MLGE LYPLVE + P + +KVTGMLLEM
Sbjct: 550 AAPNDNQRPGALS-TTLASALASATPENQRMMLGEHLYPLVERLAPNQYTAKVTGMLLEM 608
Query: 592 DQTEVLHLIESPEALKTKVAEAMAVLQ 618
DQ+EV++LIESPE LKTKV+EAM VLQ
Sbjct: 609 DQSEVINLIESPEDLKTKVSEAMQVLQ 635
>gi|224085260|ref|XP_002307526.1| predicted protein [Populus trichocarpa]
gi|222856975|gb|EEE94522.1| predicted protein [Populus trichocarpa]
Length = 649
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/622 (74%), Positives = 528/622 (84%), Gaps = 11/622 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ N SLYVGDLE NVNE QL+DLFSQVAQVVS+RVCRDQ++R+SLGYAYVN+SNPQDA+N
Sbjct: 30 FPNSSLYVGDLEHNVNEGQLFDLFSQVAQVVSIRVCRDQARRASLGYAYVNFSNPQDASN 89
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A E LNF P+NGK IRIM SHRDPS+RKSG+ NVFIKNLDTSIDNKAL +TFA+FG+VLS
Sbjct: 90 AMELLNFTPLNGKAIRIMVSHRDPSMRKSGHANVFIKNLDTSIDNKALQETFASFGSVLS 149
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA+D+NGQSKGYGFVQFENEEAAQ+AI LNGMLINDK+V+VG FVR QER + SP
Sbjct: 150 CKVAVDNNGQSKGYGFVQFENEEAAQSAINRLNGMLINDKEVFVGRFVRHQERIEATGSP 209
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
KFTNVYV NL+ET +DEDLKK F ++G ITSAIVMKD GKS+ FGFVNFQSPD+AAAAV
Sbjct: 210 KFTNVYVKNLSETTSDEDLKKFFSNYGAITSAIVMKDQSGKSKGFGFVNFQSPDSAAAAV 269
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
EKLNGTT NDKVWYVGRAQ++ EREA+L+A+FEQER SRYEKLK ANLYLKNLDD I+DE
Sbjct: 270 EKLNGTTFNDKVWYVGRAQRKGEREAELKARFEQERNSRYEKLKAANLYLKNLDDKIDDE 329
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KLKELFSEFG+ITSCKVM+DQ G SKGSGF AFS PEEA+RALN MNGKMIG+KPLYVAV
Sbjct: 330 KLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALNGMNGKMIGKKPLYVAV 389
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQA 444
AQR+EERKARLQA F QI+AP G+SP+ SG+PGYH GAPRL PQQL++GQGT G+MPPQ
Sbjct: 390 AQRREERKARLQAHFTQIQAP-GLSPMPSGLPGYHPGAPRLAPQQLFFGQGTAGMMPPQP 448
Query: 445 AGYGFQQQVFPGLRPG-GPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFM--RNSN 501
AGYGFQQQ+ PG+R G GPN++MPY +QRQ GQR G+RR GN Q+QQ Q + RN+N
Sbjct: 449 AGYGFQQQLLPGMRAGVGPNFVMPYQMQRQGQQGQRMGIRRGGNHQQIQQQQQLLHRNTN 508
Query: 502 QGIRYLDNARNGTDQS------VVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALAS 555
QG+RY+ NARNG D S V +VP PFE SGMP TP + R PVPIS LT+ALAS
Sbjct: 509 QGLRYMGNARNGIDSSAAPQGFVGPVVPFPFEASGMPVTPSDAQRTAPVPISALTTALAS 568
Query: 556 ASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMA 615
A+P+ R MLGEQLYPLVE +EP +KVTGMLLEMDQTEVLHLIESP+ALK KVAEAM
Sbjct: 569 ATPEKRMVMLGEQLYPLVERLEPDQVAKVTGMLLEMDQTEVLHLIESPDALKKKVAEAMQ 628
Query: 616 VLQEAAARSDVNEKLGSLAVNE 637
VLQE A S V ++LGSLA+NE
Sbjct: 629 VLQEVGA-SSVGDQLGSLALNE 649
>gi|147785105|emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera]
Length = 632
Score = 919 bits (2374), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/634 (70%), Positives = 518/634 (81%), Gaps = 23/634 (3%)
Query: 6 AAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSK 65
A + A+T T AA G+ N SLYVGDL+ + E QLYDLF QVA V+S+RVCRDQ++
Sbjct: 20 AVQQSTAMTGHTAAA---GFANASLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQAR 76
Query: 66 RSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDT 125
R+SLGYAYVN+++PQDA NA E LNF P+NGKPIRIM+SHRDPSIRKSG+ NVFIKNLD
Sbjct: 77 RASLGYAYVNFASPQDATNALEHLNFTPLNGKPIRIMFSHRDPSIRKSGFANVFIKNLDP 136
Query: 126 SIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQ 185
SIDNKAL DTFAAFGTVLSCK+A+D+NGQSKGYGFVQFE EEAAQNAIK LNGMLINDKQ
Sbjct: 137 SIDNKALLDTFAAFGTVLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQ 196
Query: 186 VYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK 245
VYVGLFVR QER N SPKFTNVYV NL+ET TD+DLK IFG +G+ITSA+VM+D+ G
Sbjct: 197 VYVGLFVRHQERNXGNGSPKFTNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGM 256
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTT-NNDKVWYVGRAQKRAEREADLRAKFEQERISRY 304
S+CFGFVNFQS D+AAAAVE LNG T N+DKVWYVG+AQ+++EREA+LRAKFEQER +++
Sbjct: 257 SKCFGFVNFQSSDSAAAAVEHLNGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKF 316
Query: 305 EKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEAT 364
EK KG NLYLKNLDDS+NDEKL ELFSEFGTITSCKVM+D G SKGSGF AF PEEAT
Sbjct: 317 EKFKGXNLYLKNLDDSVNDEKLXELFSEFGTITSCKVMLDPQGLSKGSGFVAFLTPEEAT 376
Query: 365 RALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPR 424
RALN MNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR+PG M+PL SG+PG+H GAPR
Sbjct: 377 RALNVMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRSPGAMTPLQSGVPGFHSGAPR 436
Query: 425 LGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPG-GPNYIMPYHLQRQVHPGQRTGVR 483
L PQQLY+GQGTPGL+P Q AGYGFQQQ+ PG+RPG PN+IMPY LQRQ PGQR GVR
Sbjct: 437 LAPQQLYFGQGTPGLIPTQPAGYGFQQQLMPGMRPGVAPNFIMPYQLQRQGQPGQRMGVR 496
Query: 484 RSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVP 543
R GN+ QM S ++P+PF+VSGMP +P++ R P
Sbjct: 497 RGGNSQQM------------------QHQQQPASWGPVMPLPFDVSGMPVSPMDIQRTGP 538
Query: 544 VPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESP 603
VP+STL SALAS +PD++ MLGEQL+PLVE IE A KVTGMLLEMDQTEVLHLIESP
Sbjct: 539 VPMSTLASALASTTPDNQRLMLGEQLFPLVERIERETAGKVTGMLLEMDQTEVLHLIESP 598
Query: 604 EALKTKVAEAMAVLQEAAARSDVNEKLGSLAVNE 637
+ALK KVAEAM VL+ +++ +DV ++LGSL +NE
Sbjct: 599 DALKNKVAEAMDVLRASSSGNDVGDQLGSLXLNE 632
>gi|224062834|ref|XP_002300896.1| predicted protein [Populus trichocarpa]
gi|222842622|gb|EEE80169.1| predicted protein [Populus trichocarpa]
Length = 648
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/621 (72%), Positives = 518/621 (83%), Gaps = 10/621 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ N SLYVGDLE NV E QL+DLFSQVA VVS RVCRDQ+ +SLGYAYVN+SNPQDAA
Sbjct: 30 FPNRSLYVGDLEHNVKEGQLFDLFSQVAPVVSTRVCRDQAGLTSLGYAYVNFSNPQDAAK 89
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A E LNF P+NGKPIRIM+SHRDP+ R+SG+ NVFIKNLDT IDNKAL +TFA+FG VLS
Sbjct: 90 AMEVLNFTPLNGKPIRIMFSHRDPTTRRSGHANVFIKNLDTKIDNKALYETFASFGPVLS 149
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA+D+NGQSKGYGF+QFENEE AQ+AI LNGML+ND++VYVG FVRR ER + N SP
Sbjct: 150 CKVAVDNNGQSKGYGFIQFENEEDAQSAINRLNGMLVNDREVYVGPFVRRLERIEANGSP 209
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
KFTNVYV NL+ET +DEDLKKIF +G ITSAIVMKD +GKSR FGFVNFQSPD+AAAAV
Sbjct: 210 KFTNVYVKNLSETTSDEDLKKIFSSYGAITSAIVMKDQNGKSRGFGFVNFQSPDSAAAAV 269
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
EKLNG T +DKVWYVGRAQ++ EREA+L+AKFEQER SRYEK+K ANLYLKNL D+I++E
Sbjct: 270 EKLNGMTFSDKVWYVGRAQRKGEREAELKAKFEQERNSRYEKMKAANLYLKNLGDTIDEE 329
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
+LKELFSEFG+ITSCKVM+DQ G SKGSGF AFS PEEA+RAL+EMNGKMIG+KPLYVA+
Sbjct: 330 RLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALSEMNGKMIGKKPLYVAI 389
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQA 444
AQR+EER ARLQA F+QI+AP G+ L SG+PGYH G PRL P QLY+GQGTPG+MPPQ
Sbjct: 390 AQRREERMARLQAHFSQIQAP-GLPTLPSGLPGYHPGTPRLAPHQLYFGQGTPGMMPPQP 448
Query: 445 AGYGFQQQVFPGLRPG-GPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFM-RNSNQ 502
AGY FQ Q+ PG+R GPN++MPY LQRQ GQR G+R GN QMQQ Q + RN+NQ
Sbjct: 449 AGYSFQPQLLPGMRAAVGPNFVMPYQLQRQGQQGQRMGMRPGGNHQQMQQQQLLHRNTNQ 508
Query: 503 GIRYLDNARNGTDQSVV------SMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASA 556
G+RY+ NARNG D SVV ++P+PFE SGMP TP PVPISTLT+ALASA
Sbjct: 509 GVRYVGNARNGIDSSVVPQGFVGPVMPLPFEASGMPITPSHAQPTTPVPISTLTTALASA 568
Query: 557 SPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAV 616
+P++R MLGEQLYPLVE +EP H +KVTGMLLEMDQTEVLHLIESP+ALK KVAEAM V
Sbjct: 569 TPENRMMMLGEQLYPLVECLEPDHVAKVTGMLLEMDQTEVLHLIESPDALKKKVAEAMQV 628
Query: 617 LQEAAARSDVNEKLGSLAVNE 637
LQEA A S V ++ GSLA+NE
Sbjct: 629 LQEAGA-SSVGDQPGSLALNE 648
>gi|224085256|ref|XP_002307525.1| predicted protein [Populus trichocarpa]
gi|222856974|gb|EEE94521.1| predicted protein [Populus trichocarpa]
Length = 614
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/613 (72%), Positives = 505/613 (82%), Gaps = 19/613 (3%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ N SLYVGDLE NVNE QL+DLFSQVAQVVS+RVCRDQ++R+SLGYAYVN+SNPQDAAN
Sbjct: 20 FPNSSLYVGDLEHNVNEGQLFDLFSQVAQVVSIRVCRDQARRASLGYAYVNFSNPQDAAN 79
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A E LNF P+NGK IRIM SHRDPS+RKSG+ NVFIKNLDTSIDNKAL +TFA+FG VLS
Sbjct: 80 AMELLNFTPLNGKAIRIMVSHRDPSMRKSGHANVFIKNLDTSIDNKALQETFASFGPVLS 139
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA+D+NGQSKGYGFVQFENEEAAQ+AI LNGMLINDK+V+VG FVR QER + SP
Sbjct: 140 CKVAVDNNGQSKGYGFVQFENEEAAQSAINRLNGMLINDKEVFVGRFVRHQERIEATGSP 199
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
KFTNVYV NL+ET +DEDLKK F ++G+ITSAIVMKD GKS+ FGFVNFQSPD+AAAAV
Sbjct: 200 KFTNVYVKNLSETTSDEDLKKFFSNYGSITSAIVMKDQSGKSKGFGFVNFQSPDSAAAAV 259
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
EKLNGTT NDKVWYVGRAQ++ EREA+L+A+FEQER SRYEKLK ANLYLKNLDD I+DE
Sbjct: 260 EKLNGTTFNDKVWYVGRAQRKGEREAELKARFEQERNSRYEKLKAANLYLKNLDDKIDDE 319
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KLKELFSEFG+ITSCKVM+DQ G SKGSGF AFS PEEA+RALN MNGKMIG+KPLYVAV
Sbjct: 320 KLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALNGMNGKMIGKKPLYVAV 379
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQA 444
AQR+EERKARLQA F QI+AP G+SP+ SG+PGYH GAPRL PQQL++GQGT G+MPPQ
Sbjct: 380 AQRREERKARLQAHFTQIQAP-GLSPMPSGLPGYHPGAPRLAPQQLFFGQGTAGMMPPQP 438
Query: 445 AGYGFQQQVFPGLRPG-GPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQG 503
AGYGFQQQ+ PG+R G GPN++MPY +QRQ GQR G+RR GN Q
Sbjct: 439 AGYGFQQQLLPGMRAGVGPNFVMPYQMQRQGQQGQRMGIRRGGN-------HQQIQQQQQ 491
Query: 504 IRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTR 563
+ Y N V P P SGMP TP + R PVPIS LT+ALASA+P+ R
Sbjct: 492 VHYRLN--------VFQRFP-PLTASGMPVTPSDAQRTAPVPISALTTALASATPEKRMV 542
Query: 564 MLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAAR 623
MLGEQLYPLVE +EP H +KVTGMLLEMDQTEVLHLIESP+ALK KVAEAM VLQE A
Sbjct: 543 MLGEQLYPLVERLEPDHVAKVTGMLLEMDQTEVLHLIESPDALKKKVAEAMQVLQEVGA- 601
Query: 624 SDVNEKLGSLAVN 636
S V ++LGSLA+N
Sbjct: 602 SSVGDQLGSLALN 614
>gi|449494063|ref|XP_004159436.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/637 (69%), Positives = 523/637 (82%), Gaps = 12/637 (1%)
Query: 12 AVTSATTAAVPSGYG--NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSL 69
AV T AV +G G + SLYVGDL+Q+VNE QL +LF QVAQVVS+RVCRDQ++R SL
Sbjct: 17 AVIPPPTVAVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQVVSIRVCRDQTRRQSL 76
Query: 70 GYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDN 129
GYAYVN+S+ QDA NA E LNF P+NGKPIRIM S+RDPSIRKSGY NVFIKNLD SIDN
Sbjct: 77 GYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKSGYANVFIKNLDLSIDN 136
Query: 130 KALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVG 189
KAL DTFAAFGTVLSCKVA+DSNGQSKGYGFVQFE+EE+A+ +I+ LNGML+NDKQVYVG
Sbjct: 137 KALRDTFAAFGTVLSCKVAVDSNGQSKGYGFVQFESEESAEISIEKLNGMLLNDKQVYVG 196
Query: 190 LFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCF 249
F+R QER + N S +FTNVYV NL ET TD+DLK +F GTITSAIVM DS+GKS+CF
Sbjct: 197 HFIRHQERIRANGS-QFTNVYVKNLPETTTDDDLKNLFAPHGTITSAIVMTDSNGKSKCF 255
Query: 250 GFVNFQSPDAAAAAVEKLNGTT-NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLK 308
GFVNFQ+ D+AAAAVEKL+GT +DK YVGRAQ++AEREA+LRAKFEQER SR+EKL+
Sbjct: 256 GFVNFQNTDSAAAAVEKLDGTVLGDDKTLYVGRAQRKAEREAELRAKFEQERKSRFEKLQ 315
Query: 309 GANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALN 368
GANLY+KNLDD I+DEKLKELFSE+GTITSCKVM+DQHG SKGSGF AFS P+EAT+ALN
Sbjct: 316 GANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSGFVAFSSPDEATKALN 375
Query: 369 EMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQ 428
EMNGKM GRKPLYVAVAQRKEERKARLQAQFAQIRA GG+S L SGIPG+H GA R+ PQ
Sbjct: 376 EMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRAAGGISSLPSGIPGFHPGAARVSPQ 435
Query: 429 QLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPG-GPNYIMPYHLQRQVHPGQRTGVRRSGN 487
Q+YYGQG PGL PPQ AGYGFQ Q+ G+RPG GPN++MPY QRQ PG R+GVRR GN
Sbjct: 436 QMYYGQGNPGLAPPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQRQGQPGPRSGVRRGGN 495
Query: 488 T-HQMQQPQFMRNSNQGIRYLDNARNGTD-----QSVVS-MVPVPFEVSGMPATPVETPR 540
+ QQ +R Q RY++NARNG + Q +VS M+P+ F+ SG+ + P + R
Sbjct: 496 SQPLPQQQLPLRGYGQSFRYMNNARNGLESPVLPQGLVSPMMPLAFDGSGVSSPPNDIQR 555
Query: 541 PVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLI 600
VP STL SALASAS +++ MLGEQLYPLVE +EP HA+KVTGMLLEMDQ EVLHLI
Sbjct: 556 SRAVPTSTLASALASASLENQRVMLGEQLYPLVERLEPSHAAKVTGMLLEMDQPEVLHLI 615
Query: 601 ESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLAVNE 637
ESP+ LK+KVAEAM VL++A++ +++++LG+L + +
Sbjct: 616 ESPDDLKSKVAEAMEVLRKASSEPELSDQLGALTLTK 652
>gi|449446375|ref|XP_004140947.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/637 (69%), Positives = 522/637 (81%), Gaps = 12/637 (1%)
Query: 12 AVTSATTAAVPSGYG--NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSL 69
AV T AV +G G + SLYVGDL+Q+VNE QL +LF QVAQVVS+RVCRDQ++R SL
Sbjct: 17 AVIPPPTVAVATGGGFLSSSLYVGDLDQSVNEGQLLELFGQVAQVVSIRVCRDQTRRQSL 76
Query: 70 GYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDN 129
GYAYVN+S+ QDA NA E LNF P+NGKPIRIM S+RDPSIRKSGY NVFIKNLD SIDN
Sbjct: 77 GYAYVNFSSHQDAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKSGYANVFIKNLDLSIDN 136
Query: 130 KALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVG 189
KAL DTFAAFGTVLSCKVA+DSNGQSKGYGFVQFE+EE+A+ +I+ LNGML+NDKQVYVG
Sbjct: 137 KALRDTFAAFGTVLSCKVAVDSNGQSKGYGFVQFESEESAEISIEKLNGMLLNDKQVYVG 196
Query: 190 LFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCF 249
F+R QER + N S +FTNVYV NL ET TD+DLK +F GTITSAIVM DS+GKS+CF
Sbjct: 197 HFIRHQERIRANGS-QFTNVYVKNLPETTTDDDLKNLFAPHGTITSAIVMTDSNGKSKCF 255
Query: 250 GFVNFQSPDAAAAAVEKLNGTT-NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLK 308
GFVNFQ+ D+AAAAVEKL+GT +DK YVGRAQ++AEREA+L+AKFEQER SR+EKL+
Sbjct: 256 GFVNFQNTDSAAAAVEKLDGTVLGDDKTLYVGRAQRKAEREAELKAKFEQERKSRFEKLQ 315
Query: 309 GANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALN 368
GANLY+KNLDD I+DEKLKELFSE+GTITSCKVM+DQHG SKGSGF AFS P+EAT+ALN
Sbjct: 316 GANLYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSGFVAFSSPDEATKALN 375
Query: 369 EMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQ 428
EMNGKM GRKPLYVAVAQRKEERKARLQAQFAQIRA GG+S L SGIPG+H GA R+ PQ
Sbjct: 376 EMNGKMKGRKPLYVAVAQRKEERKARLQAQFAQIRAAGGISSLPSGIPGFHPGAARVSPQ 435
Query: 429 QLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPG-GPNYIMPYHLQRQVHPGQRTGVRRSGN 487
Q+YYGQG PGL PPQ AGYGFQ Q+ G+RPG GPN++MPY QRQ PG R GVRR GN
Sbjct: 436 QMYYGQGNPGLAPPQPAGYGFQPQLMSGMRPGMGPNFLMPYQFQRQGQPGPRLGVRRGGN 495
Query: 488 T-HQMQQPQFMRNSNQGIRYLDNARNGTD-----QSVVS-MVPVPFEVSGMPATPVETPR 540
+ QQ +R Q RY++NARNG + Q +VS M+P+ F+ SG+ + P + R
Sbjct: 496 SQPLPQQQLPLRGYGQSFRYMNNARNGLETPVLPQGLVSPMMPLAFDGSGVSSPPNDIQR 555
Query: 541 PVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLI 600
VP STL SALASAS +++ MLGEQLYPLVE +EP HA+KVTGMLLEMDQ EVLHLI
Sbjct: 556 SRAVPTSTLASALASASLENQRVMLGEQLYPLVERLEPSHAAKVTGMLLEMDQPEVLHLI 615
Query: 601 ESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLAVNE 637
ESP+ LK+KVAEAM VL++A++ +++++LG+L + +
Sbjct: 616 ESPDDLKSKVAEAMEVLRKASSEPELSDQLGALTLTK 652
>gi|356502327|ref|XP_003519971.1| PREDICTED: polyadenylate-binding protein 5-like [Glycine max]
Length = 616
Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/623 (65%), Positives = 487/623 (78%), Gaps = 21/623 (3%)
Query: 26 GNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANA 85
GN SLYVGDLE+NV+E+QL+ LF++V + S+RVCRD++ RS LGYAYVN+ NPQDAANA
Sbjct: 4 GNASLYVGDLERNVDEAQLFQLFARVGPIFSIRVCRDETNRS-LGYAYVNFVNPQDAANA 62
Query: 86 KEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSC 145
E LNF P+NGK IR+M+S+RDPSIRKSGY NVFIKNLD SIDNK L DTFAAFG VLS
Sbjct: 63 MEHLNFTPLNGKSIRVMFSNRDPSIRKSGYANVFIKNLDISIDNKTLHDTFAAFGFVLSS 122
Query: 146 KVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK 205
KVA+DS GQSKGYGFVQF+NEE+AQNAIK LNGMLINDK+VYVGLFV RQERAQ + SPK
Sbjct: 123 KVAVDSIGQSKGYGFVQFDNEESAQNAIKELNGMLINDKKVYVGLFVNRQERAQVDGSPK 182
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
FTNVYV N +ET TDEDL+++F +GTITSA+VMKD+DGKSRCFGFVNF+SPD+A AAVE
Sbjct: 183 FTNVYVKNFSETYTDEDLEQLFSTYGTITSAVVMKDTDGKSRCFGFVNFESPDSAVAAVE 242
Query: 266 KLNGTT-NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
+LNGTT N+DKV YVGRAQ++AEREA+L+A+FE ERI +YEK G NLY+KNLD +IND+
Sbjct: 243 RLNGTTVNDDKVLYVGRAQRKAEREAELKARFELERIRKYEKYHGTNLYVKNLDYNINDD 302
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KLKELFSEFGTITSCKVM++ +G SKG GF AFS P A RAL+EMNGKMIGR+PLYVAV
Sbjct: 303 KLKELFSEFGTITSCKVMLEPNGRSKGYGFVAFSAPRNANRALHEMNGKMIGRRPLYVAV 362
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQA 444
AQRKEERKA L+AQF+Q+ A ++ L +GIP YH GAPR GPQ L+YGQG P L+ PQ
Sbjct: 363 AQRKEERKALLEAQFSQMHALYAITHLPTGIPVYHPGAPRHGPQALHYGQGAPSLVAPQP 422
Query: 445 AGYGFQQQVFPGLRPG-GPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQG 503
GYGFQQQ+ PG+ PG PN+IMPYH QRQV P R N H+ Q NS+QG
Sbjct: 423 TGYGFQQQLLPGMHPGVAPNFIMPYHRQRQVPPRLR-------NLHRNQMLHL--NSSQG 473
Query: 504 IRYLDNARNGTDQSVV------SMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASAS 557
Y+ N +NG D SVV M+P+PF+ SG+ A P P +T SALASA+
Sbjct: 474 FGYMGNGQNGMDPSVVPHGIVAPMMPLPFDGSGISAAPTYNQHPGGSLSNTFASALASAT 533
Query: 558 PDDRTRMLGEQLYPLVENIEPVH--ASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMA 615
P+++ ML E LYPLV+ I H KVTGMLLEMDQ+EV+HL ESPE LK KV EAM
Sbjct: 534 PENQHLMLAEHLYPLVDEITKNHHQTEKVTGMLLEMDQSEVIHLTESPEDLKIKVFEAMQ 593
Query: 616 VLQEAAARS-DVNEKLGSLAVNE 637
L EAA S +V ++LGS+++ E
Sbjct: 594 ALGEAAPDSEEVGDQLGSVSLKE 616
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/290 (35%), Positives = 160/290 (55%), Gaps = 19/290 (6%)
Query: 112 KSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQN 171
+SG ++++ +L+ ++D L FA G + S +V D +S GY +V F N + A N
Sbjct: 2 QSGNASLYVGDLERNVDEAQLFQLFARVGPIFSIRVCRDETNRSLGYAYVNFVNPQDAAN 61
Query: 172 AIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFG 231
A++ LN +N K + V +F R +++ + NV++ NL ++ ++ L F FG
Sbjct: 62 AMEHLNFTPLNGKSIRV-MFSNRDPSIRKS---GYANVFIKNLDISIDNKTLHDTFAAFG 117
Query: 232 TITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAER-EA 290
+ S+ V DS G+S+ +GFV F + ++A A+++LNG NDK YVG R ER +
Sbjct: 118 FVLSSKVAVDSIGQSKGYGFVQFDNEESAQNAIKELNGMLINDKKVYVGLFVNRQERAQV 177
Query: 291 DLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSK 350
D KF N+Y+KN ++ DE L++LFS +GTITS VM D G S+
Sbjct: 178 DGSPKF-------------TNVYVKNFSETYTDEDLEQLFSTYGTITSAVVMKDTDGKSR 224
Query: 351 GSGFAAFSMPEEATRALNEMNGKMIG-RKPLYVAVAQRKEERKARLQAQF 399
GF F P+ A A+ +NG + K LYV AQRK ER+A L+A+F
Sbjct: 225 CFGFVNFESPDSAVAAVERLNGTTVNDDKVLYVGRAQRKAEREAELKARF 274
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y +LYV +L+ N+N+ +L +LFS+ + S +V + + RS GY +V +S P++A
Sbjct: 285 YHGTNLYVKNLDYNINDDKLKELFSEFGTITSCKVMLEPNGRSK-GYGFVAFSAPRNANR 343
Query: 85 AKEALNFMPINGKPIRIMYSHR 106
A +N I +P+ + + R
Sbjct: 344 ALHEMNGKMIGRRPLYVAVAQR 365
>gi|297845300|ref|XP_002890531.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
gi|297336373|gb|EFH66790.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/647 (59%), Positives = 472/647 (72%), Gaps = 39/647 (6%)
Query: 3 ATGAAAATA-----AVTSATTAAVPSG-------------YGNVSLYVGDLEQNVNESQL 44
ATG A AT + T+ T+ VP + N SLY GDL+ V E+ L
Sbjct: 6 ATGVAPATMVDQIPSPTAQTSVQVPVSIPAPSPAAVADQTHPNSSLYAGDLDPKVTEAHL 65
Query: 45 YDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYS 104
+DLF VA VVSVRVCRDQ++RS LGYAY+N+SNP DA A EALN+ P+ +PIRIM S
Sbjct: 66 FDLFKHVANVVSVRVCRDQNRRS-LGYAYINFSNPNDAYRAMEALNYTPLFERPIRIMLS 124
Query: 105 HRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFE 164
+RDPS R SG GN+FIKNLD SIDNKAL +TF++FGT+LSCKVA+D G+SKGYGFVQFE
Sbjct: 125 NRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFE 184
Query: 165 NEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA--QQNVSPKFTNVYVNNLAETVTDED 222
EE+AQ AI LNGML+NDKQV+VG F+RRQERA + +P+FTNVYV NL + + +++
Sbjct: 185 KEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDE 244
Query: 223 LKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRA 282
L+K FG FG I+SA+VM+D G SRCFGFVNF+ +AAA+AVEK+NG + D V YVGRA
Sbjct: 245 LRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRA 304
Query: 283 QKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVM 342
QK++ERE +LR KFEQERI+R+EK +GANLYLKNLDDS++DEKLKE+FSE+G +TS KVM
Sbjct: 305 QKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVM 364
Query: 343 VDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQI 402
++ G S+G GF A+S PEEA RAL+EMNGKMIG+KPLY+A+AQRKE+R+A LQA F+QI
Sbjct: 365 LNPQGLSRGFGFVAYSNPEEALRALSEMNGKMIGKKPLYIALAQRKEDRRAHLQALFSQI 424
Query: 403 RAPGGMSPLASGIPGYHH---GAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRP 459
RAPG MS G+HH G PQ +Y GQ L+P Q GYGFQ Q PG+RP
Sbjct: 425 RAPGPMS-------GFHHPPGGPMSGPPQHMYVGQNGASLVPSQPIGYGFQPQFMPGMRP 477
Query: 460 G-GP-NYIMPYHLQRQVHPGQRTGVRRSGNT--HQMQQPQFM-RNSNQGIRYLD---NAR 511
G GP N++MPY LQRQ G R G RR H +QQ Q M RN G+RY++ N R
Sbjct: 478 GSGPGNFVMPYPLQRQPQTGPRMGFRRGATNMQHHIQQQQLMNRNPTPGMRYMNGAGNGR 537
Query: 512 NGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYP 571
NG D SV + P + A+ + + +PIS LTS+LASASP DRTRMLGEQLYP
Sbjct: 538 NGMDSSVPQGILPPIMPLPIDASSISHQKAPLLPISKLTSSLASASPADRTRMLGEQLYP 597
Query: 572 LVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
LVE EP+H +KVTGMLLEMDQ E+LHL+ESPEALK+KV+EA+ VL+
Sbjct: 598 LVERHEPLHVAKVTGMLLEMDQAEILHLMESPEALKSKVSEALDVLR 644
>gi|386780450|dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 657
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/629 (60%), Positives = 472/629 (75%), Gaps = 18/629 (2%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
P G + SLYVGDLE NV +SQLYDLF+QV QVVSVRVCRD S R SLGY YVNYSNP
Sbjct: 31 TPGGLTSTSLYVGDLEFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPN 90
Query: 81 DAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
DA+ A E LNF P+NGK IR+MYSHRDP++RKSG N+FIKNLD SIDNKAL DTF++FG
Sbjct: 91 DASRAMEMLNFTPVNGKSIRVMYSHRDPTLRKSGSANIFIKNLDKSIDNKALHDTFSSFG 150
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
+LSCK+A DSNGQSKGYGFVQ++NEE+AQ AI LNGML+NDKQVYVG F+R+QER
Sbjct: 151 NILSCKIATDSNGQSKGYGFVQYDNEESAQGAIDKLNGMLMNDKQVYVGHFLRKQEREST 210
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
KF NVYV NL+E+ TD++LKK+FG FG ITSA+VM+D+DGKS+CFGF+NF++ + A
Sbjct: 211 TGMTKFQNVYVKNLSESTTDDELKKVFGEFGNITSAVVMRDADGKSKCFGFINFETAEDA 270
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
A AVE LNG +DK WYVG+AQK++ERE +L++KFEQ +K +G NLY+KNLDD+
Sbjct: 271 AKAVESLNGKKFDDKEWYVGKAQKKSEREQELKSKFEQTAKEAVDKYQGLNLYVKNLDDT 330
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
I+DEKLKELFSEFGTITSCKVM D G S+GSGF AFS EEA+RAL+EMNGKMI KPL
Sbjct: 331 IDDEKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALSEMNGKMIVSKPL 390
Query: 381 YVAVAQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGL 439
YVA+AQRKEER+A+LQAQF+Q+R P M P LA +P Y GAP +G QQL+YGQG P +
Sbjct: 391 YVALAQRKEERRAKLQAQFSQLR-PVAMPPSLAPRMPIYPPGAPGIG-QQLFYGQGPPAM 448
Query: 440 MPPQAAGYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQF 496
+PPQ AG+G+QQQ+ PG+RPGG PN+ MP +Q+ + G R +G Q QQP
Sbjct: 449 IPPQ-AGFGYQQQLVPGMRPGGAPMPNFFMPL-VQQGQQGQRPGGRRGAGPVQQTQQPMP 506
Query: 497 MRNSNQGIR----YLDNARNGTDQSVV----SMVPVPFEVSGMPATPVETPRPVPVPIST 548
+ R RNG + + M+ VP+++ GM P ++ P+PIST
Sbjct: 507 LMQQQMLPRGRMYRYPPGRNGPEGPMPGVPGGMLSVPYDMGGM--LPRDSAMGQPMPIST 564
Query: 549 LTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
L SALA+A P+ + MLGE LYPLV+ +E HA+KVTGMLLEMDQTEVLHL+ESPEALK
Sbjct: 565 LASALANAPPEQQRTMLGESLYPLVDQLEHEHAAKVTGMLLEMDQTEVLHLLESPEALKA 624
Query: 609 KVAEAMAVLQEAAARSDVNEKLGSLAVNE 637
KVAEAM VL+ ++ ++L SL++N+
Sbjct: 625 KVAEAMEVLRNVQQTTNPADQLASLSLND 653
>gi|297841929|ref|XP_002888846.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
gi|297334687|gb|EFH65105.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
Length = 685
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/626 (60%), Positives = 470/626 (75%), Gaps = 21/626 (3%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ N SLYVGDL+ +V+E QL DLF+QVA V +VRVCRD ++RS LGYAYVN++NP+DA+
Sbjct: 55 HPNSSLYVGDLDPSVDEPQLLDLFNQVAPVQTVRVCRDLTRRS-LGYAYVNFANPEDASR 113
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A ++LN+ PI +PIRIM S+RDPS R SG GNVFIKNLD SIDNKAL +TF+AFGT+LS
Sbjct: 114 AMDSLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDPSIDNKALYETFSAFGTILS 173
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA--QQNV 202
CKVA+D+ G+SKGYGFVQFE EE AQ AI LNGML+NDKQV+VG FVRRQ+R+ +
Sbjct: 174 CKVAMDAVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRSRSESGA 233
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
P+FTNVYV NL + +TD++LKK FG +G I+SA+VMKD G SR FGFVNF+SP+AAA
Sbjct: 234 VPRFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFESPEAAAV 293
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AVEK+NG + + V YVGRAQK++ERE +LR KFEQERISR+EKL+G+NLYLKNLDDS+N
Sbjct: 294 AVEKMNGISLGEDVLYVGRAQKKSEREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVN 353
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DEKLKE+FSE+G +TSCKVM++ G S+G GF A+S PEEA+RAL+EMNGKMIGRKPLYV
Sbjct: 354 DEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSSPEEASRALSEMNGKMIGRKPLYV 413
Query: 383 AVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHH---GAPRLGPQQ--LYYGQGTP 437
A AQRKEER+A LQ F IR+PG MSP+ S +PG+HH G P GP +Y GQ
Sbjct: 414 AFAQRKEERRAHLQTLFTHIRSPGTMSPIPSPMPGFHHHPPGGPMSGPHHPTMYIGQNGQ 473
Query: 438 GLMPPQAAGYGFQQQVFPGLRPG-GP-NYIMPYHLQRQVHPGQRTGVRRSGNT---HQMQ 492
GL+PPQ GYG+Q Q PG+RPG GP NY+MP+ LQRQ PG R G RR N H Q
Sbjct: 474 GLVPPQPMGYGYQVQFMPGVRPGAGPANYMMPFPLQRQTQPGPRVGFRRGANNMQQHFQQ 533
Query: 493 QPQFMRNSNQGIRYL---DNARNGTDQSVV-SMVPVPFEVSGMPATPVETP-RPVPVPIS 547
Q +N++ G+RY+ N RNG + S ++P+P S + + P +P + IS
Sbjct: 534 QQILQQNASPGMRYMGGAGNRRNGMEASAPQGIIPLPLNASAISHNAPQHPHKPPLLTIS 593
Query: 548 TLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALK 607
L S LA A P+ +MLGE LYPLV EP +A+KVTGMLLEMDQ E+LHL+ESPEALK
Sbjct: 594 KLASDLALAPPEKHPQMLGENLYPLVAQQEPEYAAKVTGMLLEMDQAEILHLLESPEALK 653
Query: 608 TKVAEAMAVLQ---EAAARSDVNEKL 630
KV+EA+ VL+ A A S V+++
Sbjct: 654 AKVSEALDVLRLSANAPAVSSVDDQF 679
>gi|7239504|gb|AAF43230.1|AC012654_14 Identical to the polyadenylate-binding protein 5 (PAB5) from
Arabidopsis thaliana gb|M97657 [Arabidopsis thaliana]
Length = 668
Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/610 (60%), Positives = 453/610 (74%), Gaps = 14/610 (2%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ N SLYVGDL+ +VNES L DLF+QVA V ++RVCRD + RS LGYAYVN++NP+DA+
Sbjct: 42 HPNSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDLTHRS-LGYAYVNFANPEDASR 100
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A E+LN+ PI +PIRIM S+RDPS R SG GNVFIKNLD SIDNKAL +TF++FGT+LS
Sbjct: 101 AMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILS 160
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA--QQNV 202
CKVA+D G+SKGYGFVQFE EE AQ AI LNGML+NDKQV+VG FVRRQ+RA +
Sbjct: 161 CKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGA 220
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
P FTNVYV NL + +TD++LKK FG +G I+SA+VMKD G SR FGFVNF SP+AAA
Sbjct: 221 VPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAV 280
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AVEK+NG + + V YVGRAQK+++RE +LR KFEQERISR+EKL+G+NLYLKNLDDS+N
Sbjct: 281 AVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVN 340
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DEKLKE+FSE+G +TSCKVM++ G S+G GF A+S PEEA A+ EMNGKMIGRKPLYV
Sbjct: 341 DEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYV 400
Query: 383 AVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHH---GAPRLGPQQ-LYYGQGTPG 438
A+AQRKEER+A LQ+ F QIR+PG MSP+ S + G+HH G P GP ++ G G
Sbjct: 401 ALAQRKEERQAHLQSLFTQIRSPGTMSPVPSPMSGFHHHPPGGPMSGPHHPMFIGHNGQG 460
Query: 439 LMPPQAAGYGFQQQVFPGLRPGG--PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQF 496
L+P Q GYG+Q Q PG+RPG PN++MP+ LQRQ PG R G RR N Q Q Q
Sbjct: 461 LVPSQPMGYGYQVQFMPGMRPGAGPPNFMMPFPLQRQTQPGPRVGFRRGANNMQQQFQQQ 520
Query: 497 MRNSNQGIRYL---DNARNGTDQSVV-SMVPVPFEVSGMPAT-PVETPRPVPVPISTLTS 551
R++ N RNG + S ++P+P S P + +P P+ IS L S
Sbjct: 521 QMLQQNASRFMGGAGNRRNGMEASAPQGIIPLPLNASANSHNAPQRSHKPTPLTISKLAS 580
Query: 552 ALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVA 611
LA ASPD RMLG+ LYPLVE EP +A+KVTGMLLEMDQ E+LHL+ESPEALK KV+
Sbjct: 581 DLALASPDKHPRMLGDHLYPLVEQQEPANAAKVTGMLLEMDQAEILHLLESPEALKAKVS 640
Query: 612 EAMAVLQEAA 621
EA+ VL+ +A
Sbjct: 641 EALDVLRRSA 650
>gi|334183839|ref|NP_177322.2| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|334183841|ref|NP_001185373.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|322510110|sp|Q05196.3|PABP5_ARATH RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|332197109|gb|AEE35230.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|332197110|gb|AEE35231.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
Length = 682
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/610 (60%), Positives = 453/610 (74%), Gaps = 14/610 (2%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ N SLYVGDL+ +VNES L DLF+QVA V ++RVCRD + RS LGYAYVN++NP+DA+
Sbjct: 56 HPNSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDLTHRS-LGYAYVNFANPEDASR 114
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A E+LN+ PI +PIRIM S+RDPS R SG GNVFIKNLD SIDNKAL +TF++FGT+LS
Sbjct: 115 AMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILS 174
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA--QQNV 202
CKVA+D G+SKGYGFVQFE EE AQ AI LNGML+NDKQV+VG FVRRQ+RA +
Sbjct: 175 CKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGA 234
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
P FTNVYV NL + +TD++LKK FG +G I+SA+VMKD G SR FGFVNF SP+AAA
Sbjct: 235 VPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAV 294
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AVEK+NG + + V YVGRAQK+++RE +LR KFEQERISR+EKL+G+NLYLKNLDDS+N
Sbjct: 295 AVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVN 354
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DEKLKE+FSE+G +TSCKVM++ G S+G GF A+S PEEA A+ EMNGKMIGRKPLYV
Sbjct: 355 DEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYV 414
Query: 383 AVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHH---GAPRLGPQQ-LYYGQGTPG 438
A+AQRKEER+A LQ+ F QIR+PG MSP+ S + G+HH G P GP ++ G G
Sbjct: 415 ALAQRKEERQAHLQSLFTQIRSPGTMSPVPSPMSGFHHHPPGGPMSGPHHPMFIGHNGQG 474
Query: 439 LMPPQAAGYGFQQQVFPGLRPGG--PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQF 496
L+P Q GYG+Q Q PG+RPG PN++MP+ LQRQ PG R G RR N Q Q Q
Sbjct: 475 LVPSQPMGYGYQVQFMPGMRPGAGPPNFMMPFPLQRQTQPGPRVGFRRGANNMQQQFQQQ 534
Query: 497 MRNSNQGIRYL---DNARNGTDQSVV-SMVPVPFEVSGMPAT-PVETPRPVPVPISTLTS 551
R++ N RNG + S ++P+P S P + +P P+ IS L S
Sbjct: 535 QMLQQNASRFMGGAGNRRNGMEASAPQGIIPLPLNASANSHNAPQRSHKPTPLTISKLAS 594
Query: 552 ALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVA 611
LA ASPD RMLG+ LYPLVE EP +A+KVTGMLLEMDQ E+LHL+ESPEALK KV+
Sbjct: 595 DLALASPDKHPRMLGDHLYPLVEQQEPANAAKVTGMLLEMDQAEILHLLESPEALKAKVS 654
Query: 612 EAMAVLQEAA 621
EA+ VL+ +A
Sbjct: 655 EALDVLRRSA 664
>gi|166786|gb|AAA32832.1| poly(A)-binding protein [Arabidopsis thaliana]
Length = 668
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/610 (60%), Positives = 452/610 (74%), Gaps = 14/610 (2%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ N SLYVGDL+ +VNES L DLF+QVA V ++RVCRD + RS LGYAYVN++NP+DA+
Sbjct: 42 HPNSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDLTHRS-LGYAYVNFANPEDASR 100
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A E+LN+ PI +PIRIM S+RDPS R SG GNVFIKNLD SIDNKAL +TF++FGT+LS
Sbjct: 101 AMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILS 160
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA--QQNV 202
CKVA+D G+SKGYGFVQFE EE AQ AI LNGML+NDKQV+VG FVRRQ+RA +
Sbjct: 161 CKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGA 220
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
P FTNVYV NL + +TD++LKK FG +G I+SA+VMKD G SR FGFVNF SP+AAA
Sbjct: 221 VPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAV 280
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AVEK+NG + + V YVGRAQK+++RE +LR KFEQERISR+EKL+G+NLYLKNLDDS+N
Sbjct: 281 AVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVN 340
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DEKLKE+FSE+G +TSCKVM++ G S+G GF A+S PEEA A+ EMNGKMIGRKPLYV
Sbjct: 341 DEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYV 400
Query: 383 AVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHH---GAPRLGPQQ-LYYGQGTPG 438
A+AQRKEER+A LQ+ F QIR+PG MSP+ S + G+HH G P GP ++ G G
Sbjct: 401 ALAQRKEERQAHLQSLFTQIRSPGTMSPVPSPMSGFHHHPPGGPMSGPHHPMFIGHNGQG 460
Query: 439 LMPPQAAGYGFQQQVFPGLRPGG--PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQF 496
L+P Q GYG+Q Q PG+RPG PN++MP+ LQRQ PG R G RR N Q Q Q
Sbjct: 461 LVPSQPMGYGYQVQFMPGMRPGAGPPNFMMPFPLQRQTQPGPRVGFRRGANNMQQQFQQQ 520
Query: 497 MRNSNQGIRYL---DNARNGTDQSVV-SMVPVPFEVSGMPAT-PVETPRPVPVPISTLTS 551
R++ N RNG + S ++P+P S P + +P P+ IS L S
Sbjct: 521 QMLQQNASRFMGGAGNRRNGMEASAPQGIIPLPLNASANSHNAPQRSHKPTPLTISKLAS 580
Query: 552 ALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVA 611
LA ASPD RMLG+ LYPLVE EP + +KVTGMLLEMDQ E+LHL+ESPEALK KV+
Sbjct: 581 DLALASPDKHPRMLGDHLYPLVEQQEPANPAKVTGMLLEMDQAEILHLLESPEALKAKVS 640
Query: 612 EAMAVLQEAA 621
EA+ VL+ +A
Sbjct: 641 EALDVLRRSA 650
>gi|358346231|ref|XP_003637173.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355503108|gb|AES84311.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 622
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/635 (59%), Positives = 477/635 (75%), Gaps = 27/635 (4%)
Query: 11 AAVTSATTAAVPSG------YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQS 64
AA+ S+ VP+ + N SLYVGDL+ NVN++QLYDLFSQ+A V+SVRVCRDQ
Sbjct: 2 AAIVSSPKIVVPAALTSAGRFENSSLYVGDLQGNVNDAQLYDLFSQIAPVISVRVCRDQM 61
Query: 65 KRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLD 124
+SSLGY YVNYSN +DAANA E LN++P+NGKPIRIM+SHRDP IRK+G+ N+FIKNL+
Sbjct: 62 TQSSLGYGYVNYSNARDAANAMENLNYVPLNGKPIRIMFSHRDPLIRKTGFANLFIKNLE 121
Query: 125 TSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDK 184
TSIDNKAL +TF+ FG VLSCKVA+DSNG SKG+GFVQF+N+++A+NAI+ L+G L+NDK
Sbjct: 122 TSIDNKALHETFSVFGNVLSCKVAMDSNGHSKGHGFVQFDNDQSAKNAIEKLDGRLMNDK 181
Query: 185 QVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG 244
+VYVG FVR QER+ SPKFTNVYV NL+E+ T+EDLK++F FG ITS +MKD +G
Sbjct: 182 KVYVGYFVRCQERS----SPKFTNVYVKNLSESYTNEDLKQLFNTFGVITSVKIMKDENG 237
Query: 245 KSRCFGFVNFQSPDAAAAAVEKLNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISR 303
S+ FGFVNFQS D+AA AVEKLNG+T ND KV +VGRAQK++EREA+L+A FEQE++ R
Sbjct: 238 NSKRFGFVNFQSSDSAATAVEKLNGSTTNDGKVLFVGRAQKKSEREAELKAFFEQEKLKR 297
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEA 363
YEK +GANLYLKN+D S+N+EKLKELFSEFGTITSCKVM D G SKG GF AF+ PEEA
Sbjct: 298 YEKFQGANLYLKNIDKSLNEEKLKELFSEFGTITSCKVMSDARGRSKGVGFVAFTTPEEA 357
Query: 364 TRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAP 423
++A++EMNGK+IG+KP+YV+VAQRKEERKA+LQA F I+ GG + GYH
Sbjct: 358 SKAIDEMNGKIIGQKPVYVSVAQRKEERKAQLQAHFPAIQVSGGNA-------GYHSSVQ 410
Query: 424 RLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPG--GPNYIMPYHLQRQVHPGQRTG 481
RL PQQ YY QGT LM PQ GYGF+ + + PG PNY++PYHLQRQ HPG R G
Sbjct: 411 RLAPQQFYYEQGTFDLMAPQPNGYGFRPKFMSDVGPGFVTPNYLLPYHLQRQGHPGNRMG 470
Query: 482 VRRSGNTHQMQQPQ---FMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVET 538
R +GN Q++Q + RN NQG++Y N +NG SV + + S AT
Sbjct: 471 GRPAGNFQQVRQKKNQMLPRNPNQGLKY--NGQNGVGMSVDPGSQL-MDPSASAATSTGN 527
Query: 539 PRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEP-VHASKVTGMLLEMDQTEVL 597
P+ ++L SALASAS +++ RML E L+PLV + P + +KVT MLLEMDQ+EV+
Sbjct: 528 HHHGPLSNNSLASALASASQENQHRMLEEHLHPLVGRLAPTIQTAKVTRMLLEMDQSEVI 587
Query: 598 HLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGS 632
HLIESPE LK KVAEAM L++A+ V +K+GS
Sbjct: 588 HLIESPEELKMKVAEAMRFLRDASQGPAVGDKIGS 622
>gi|9930616|gb|AAG02117.1|AF293840_1 poly(A) binding protein [Arabidopsis thaliana]
Length = 660
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/654 (58%), Positives = 473/654 (72%), Gaps = 39/654 (5%)
Query: 3 ATGAAAATA-----AVTSATTAAVPSG-------------YGNVSLYVGDLEQNVNESQL 44
ATG A AT + T+ T+ VP + N SLY GDL+ V E+ L
Sbjct: 6 ATGVAPATMVDQVPSPTAQTSVQVPVSIPLPSPVVVADQTHPNSSLYAGDLDPKVTEAHL 65
Query: 45 YDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYS 104
+DLF VA VVSVRVCRDQ++RS LGYAY+N+SNP DA A EALN+ P+ +PIRIM S
Sbjct: 66 FDLFKHVANVVSVRVCRDQNRRS-LGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLS 124
Query: 105 HRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFE 164
+RDPS R SG GN+FIKNLD SIDNKAL +TF++FGT+LSCKVA+D G+SKGYGFVQFE
Sbjct: 125 NRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFE 184
Query: 165 NEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA--QQNVSPKFTNVYVNNLAETVTDED 222
EE+AQ AI LNGML+NDKQV+VG F+RRQERA + +P+FTNVYV NL + + +++
Sbjct: 185 KEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDE 244
Query: 223 LKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRA 282
L+K FG FG I+SA+VM+D G SRCFGFVNF+ +AAA+AVEK+NG + D V YVGRA
Sbjct: 245 LRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRA 304
Query: 283 QKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVM 342
QK++ERE +LR KFEQERI+R+EK +GANLYLKNLDDS++DEKLKE+FSE+G +TS KVM
Sbjct: 305 QKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVM 364
Query: 343 VDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQI 402
++ G S+G GF A+S PEEA RAL+EMNGKMIGRKPLY+A+AQRKE+R+A LQA F+QI
Sbjct: 365 LNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKEDRRAHLQALFSQI 424
Query: 403 RAPGGMSPLASGIPGYHH---GAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRP 459
RAPG MS G+HH G PQ +Y GQ ++P Q GYGFQ Q PG+RP
Sbjct: 425 RAPGPMS-------GFHHPPGGPMPGPPQHMYVGQNGASMVPSQPIGYGFQPQFMPGMRP 477
Query: 460 G-GP-NYIMPYHLQRQVHPGQRTGVRRSGNT---HQMQQPQFMRNSNQGIRYLD---NAR 511
G GP N+I+PY LQRQ G R G RR H QQ RN + G+RY++ N R
Sbjct: 478 GSGPGNFIVPYSLQRQPQTGPRMGFRRGATNVQQHIQQQQLMHRNPSPGMRYMNGASNGR 537
Query: 512 NGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYP 571
NG D SV + P + A+ + + +PIS LTS+LASASP DRTRMLGEQLYP
Sbjct: 538 NGMDSSVPQGILPPIIPLPIDASSISHQKAPLLPISKLTSSLASASPADRTRMLGEQLYP 597
Query: 572 LVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSD 625
LVE EP+H +KVTGMLLEMDQ E+LHL+ESPEALK+KV+EA+ VL+ + +D
Sbjct: 598 LVERHEPLHVAKVTGMLLEMDQAEILHLMESPEALKSKVSEALDVLRLSVDPTD 651
>gi|15219945|ref|NP_173690.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
gi|12643628|sp|O64380.1|PABP3_ARATH RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3
gi|2505869|emb|CAA72907.1| polyA binding protein PAB3 [Arabidopsis thaliana]
gi|15450820|gb|AAK96681.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis
thaliana]
gi|332192163|gb|AEE30284.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
Length = 660
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/654 (58%), Positives = 473/654 (72%), Gaps = 39/654 (5%)
Query: 3 ATGAAAATA-----AVTSATTAAVPSG-------------YGNVSLYVGDLEQNVNESQL 44
ATG A AT + T+ T+ VP + N SLY GDL+ V E+ L
Sbjct: 6 ATGVAPATMVDQVPSPTAQTSVQVPVSIPLPSPVVVADQTHPNSSLYAGDLDPKVTEAHL 65
Query: 45 YDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYS 104
+DLF VA VVSVRVCRDQ++RS LGYAY+N+SNP DA A EALN+ P+ +PIRIM S
Sbjct: 66 FDLFKHVANVVSVRVCRDQNRRS-LGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLS 124
Query: 105 HRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFE 164
+RDPS R SG GN+FIKNLD SIDNKAL +TF++FGT+LSCKVA+D G+SKGYGFVQFE
Sbjct: 125 NRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFE 184
Query: 165 NEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA--QQNVSPKFTNVYVNNLAETVTDED 222
EE+AQ AI LNGML+NDKQV+VG F+RRQERA + +P+FTNVYV NL + + +++
Sbjct: 185 KEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDE 244
Query: 223 LKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRA 282
L+K FG FG I+SA+VM+D G SRCFGFVNF+ +AAA+AVEK+NG + D V YVGRA
Sbjct: 245 LRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRA 304
Query: 283 QKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVM 342
QK++ERE +LR KFEQERI+R+EK +GANLYLKNLDDS++DEKLKE+FSE+G +TS KVM
Sbjct: 305 QKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVM 364
Query: 343 VDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQI 402
++ G S+G GF A+S PEEA RAL+EMNGKMIGRKPLY+A+AQRKE+R+A LQA F+QI
Sbjct: 365 LNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKEDRRAHLQALFSQI 424
Query: 403 RAPGGMSPLASGIPGYHH---GAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRP 459
RAPG MS G+HH G PQ +Y GQ ++P Q GYGFQ Q PG+RP
Sbjct: 425 RAPGPMS-------GFHHPPGGPMPGPPQHMYVGQNGASMVPSQPIGYGFQPQFMPGMRP 477
Query: 460 G-GP-NYIMPYHLQRQVHPGQRTGVRRSGNT---HQMQQPQFMRNSNQGIRYLD---NAR 511
G GP N+I+PY LQRQ G R G RR H QQ RN + G+RY++ N R
Sbjct: 478 GSGPGNFIVPYPLQRQPQTGPRMGFRRGATNVQQHIQQQQLMHRNPSPGMRYMNGASNGR 537
Query: 512 NGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYP 571
NG D SV + P + A+ + + +PIS LTS+LASASP DRTRMLGEQLYP
Sbjct: 538 NGMDSSVPQGILPPIIPLPIDASSISHQKAPLLPISKLTSSLASASPADRTRMLGEQLYP 597
Query: 572 LVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSD 625
LVE EP+H +KVTGMLLEMDQ E+LHL+ESPEALK+KV+EA+ VL+ + +D
Sbjct: 598 LVERHEPLHVAKVTGMLLEMDQAEILHLMESPEALKSKVSEALDVLRLSVDPTD 651
>gi|168053933|ref|XP_001779388.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669186|gb|EDQ55778.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 650
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/629 (60%), Positives = 467/629 (74%), Gaps = 23/629 (3%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ + SLYVGDLE NV+E+QLY+LF+QV QVVS+RVCRD R SLGYAYVNY++ QDA
Sbjct: 25 FVSTSLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRSLGYAYVNYNSAQDATR 84
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A E LNF +NG PIRIM+SHRDPSIRKSG N+FIKNLD +IDNKAL DTF+AFG +LS
Sbjct: 85 ALELLNFSVLNGNPIRIMFSHRDPSIRKSGTANIFIKNLDKTIDNKALHDTFSAFGGILS 144
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA+D +GQSKGYGFVQFE EE+A AI+ +NGML+NDKQV+VG FVRRQER Q
Sbjct: 145 CKVAVDGSGQSKGYGFVQFEQEESALTAIEKVNGMLLNDKQVFVGPFVRRQERDQSGGVS 204
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
KF NVYV NL E T++DLK +FG +GTI+SA+VM+DSDGKS+CFGFVNF+ PD AA AV
Sbjct: 205 KFNNVYVKNLGENTTEDDLKNVFGAYGTISSAVVMRDSDGKSKCFGFVNFEHPDNAAKAV 264
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
E LNG ++K WYVGRAQK++EREA+LRAKFEQER R EK +G NLYLKNLDD+++DE
Sbjct: 265 EALNGKKRDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYLKNLDDTVDDE 324
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KL+ELF+++GTITSCKVM D G S+GSGF AFS PEEATRA+ EMNGKM+G KPLYVA+
Sbjct: 325 KLRELFADYGTITSCKVMRDPQGQSRGSGFVAFSSPEEATRAVTEMNGKMVGSKPLYVAL 384
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQ 443
AQRKEER+ARLQA FAQ+R +SP + + +P YH G P + PQ YYGQ G +P Q
Sbjct: 385 AQRKEERRARLQAAFAQMRT--SVSPAVPTSLPMYHPG-PGMSPQMPYYGQHPSGPIPLQ 441
Query: 444 AAGYGFQQQVFPGLRPGG---PNYI----MPYHLQRQVHPGQRTGVRRSGNTHQMQQPQF 496
A +G+Q Q+ +RPGG PNYI +P +Q Q Q Q
Sbjct: 442 PAAFGYQPQI---IRPGGAQFPNYIGYANVPLRQGQQGQRAGGRRGGAPQQQQQQLQQQM 498
Query: 497 M-RNSNQGIRYLDNARNGTDQSVV------SMVPVPFEVSGMPATPVETPRP-VPVPIST 548
+ R N+ +RY NARN D +V +MVPVP E+ G+P V++ P P+PIS
Sbjct: 499 IQRGGNRNLRYTPNARNMPDTAVPPQGIMGAMVPVPLEIGGLPVANVDSGVPQQPLPISA 558
Query: 549 LTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
L SALASA P+ + MLGEQLYPLV+ +E +A KVTGMLLEMDQTEVLHLIESPEAL+
Sbjct: 559 LASALASAPPEQQRAMLGEQLYPLVDQLEHDYAGKVTGMLLEMDQTEVLHLIESPEALRA 618
Query: 609 KVAEAMAVLQEA-AARSDVNEKLGSLAVN 636
KVAEAM VL+ A AA ++LG+L+++
Sbjct: 619 KVAEAMDVLRMAQAAPVAPTDELGNLSIS 647
>gi|168036104|ref|XP_001770548.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678256|gb|EDQ64717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 645
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/628 (60%), Positives = 462/628 (73%), Gaps = 20/628 (3%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ + SLYVGDLE V+E+QLY++FSQV QVVS+RVCRD R SLGYAYVNY+N QDA
Sbjct: 21 FVSTSLYVGDLESTVSEAQLYEIFSQVGQVVSIRVCRDLITRRSLGYAYVNYNNAQDATR 80
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A E LNF +NGKPIRIM+SHRDPSIRKSG N+FIKNLD SIDNKAL DTFAAFGT+LS
Sbjct: 81 ALELLNFNAVNGKPIRIMFSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFAAFGTILS 140
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA D +GQSKGYGFVQFE EE+AQ AI+ +NGML+NDKQV+VG FVRRQER Q V
Sbjct: 141 CKVATDPSGQSKGYGFVQFEQEESAQTAIEKVNGMLLNDKQVFVGPFVRRQERDQSGVVS 200
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
KF NVYV NLA++ TD++LKK+F +G I+SA+VM+D++GKS+CFGFVNF+ D AA AV
Sbjct: 201 KFNNVYVKNLADSTTDDELKKVFEAYGPISSAVVMRDNEGKSKCFGFVNFEHADDAAKAV 260
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
E LNG ++K WYVGRAQK++EREA+LRAKFEQER R EK +G NLYLKNLDD+I+DE
Sbjct: 261 EALNGKKFDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYLKNLDDTIDDE 320
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KL+E+FSE+GTI SCKVM D G S+GSGF AFS P+EATRA+ EMNGKM+G KPLYVA+
Sbjct: 321 KLREIFSEYGTIVSCKVMRDPQGQSRGSGFVAFSSPDEATRAVTEMNGKMVGSKPLYVAL 380
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQA 444
AQRKEER+ RLQA FAQ R P G + + + +P YH P +GP YYGQ PG +P Q
Sbjct: 381 AQRKEERRNRLQAAFAQ-RTPVGPA-VPTSLPMYHPAGPGMGPGMSYYGQHPPGPIPLQP 438
Query: 445 AGYGFQQQVFPGLRPGG---PNYI----MPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFM 497
A +G+Q Q+ +RPGG PNY+ +P Q Q + Q QQ
Sbjct: 439 AAFGYQPQL---IRPGGAQFPNYMGFPNVPPLRQGQQGQRAGGRRGGAPQQQQPQQQMIQ 495
Query: 498 RNSNQGIRYLDNARNGTDQSVV------SMVPVPFEVSGMPATPVETPRP-VPVPISTLT 550
R N+ RY NARN D +V +M+PVP E+ G+P + P P+PIS L
Sbjct: 496 RGGNRNFRYTTNARNTPDVAVPPQGIMGAMLPVPIEIGGVPVANADAGVPQQPLPISALA 555
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
SALASA P+ + MLGEQLYPLV+ +E A KVTGMLLEMDQTEVLHLIESPEALK KV
Sbjct: 556 SALASAPPEQQRAMLGEQLYPLVDQLEHDFAGKVTGMLLEMDQTEVLHLIESPEALKAKV 615
Query: 611 AEAMAVLQEA-AARSDVNEKLGSLAVNE 637
AEAM VL+ A A S ++LG+LA+ +
Sbjct: 616 AEAMDVLRMAQAVPSPPTDQLGNLAIGD 643
>gi|224137600|ref|XP_002327166.1| predicted protein [Populus trichocarpa]
gi|222835481|gb|EEE73916.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/626 (61%), Positives = 466/626 (74%), Gaps = 25/626 (3%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL+ NV +SQLYD+F+QV QVVSVRVCRD S R SLGY YVNYSNPQDAA A +
Sbjct: 12 TSLYVGDLDFNVTDSQLYDVFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALD 71
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LNF P+N KPIRIMYSHRDPSIRKSG N+FIKNLD ID+KAL DTF++FG +LSCKV
Sbjct: 72 VLNFTPLNNKPIRIMYSHRDPSIRKSGMANIFIKNLDKGIDHKALHDTFSSFGNILSCKV 131
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A D++GQSKGYGFVQF++EEAAQNAI LNGML+NDKQVYVG F+R+Q+R S KF
Sbjct: 132 ATDASGQSKGYGFVQFDSEEAAQNAIDKLNGMLVNDKQVYVGHFLRKQDRDGALYSIKFN 191
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NV+V NLAE+ TDE+LK IF G ITSA+VM+D+DGKS+CFGFVNF+S D AA AVE L
Sbjct: 192 NVFVKNLAESTTDEELKNIFAEHGAITSAVVMRDADGKSKCFGFVNFESADDAAKAVEAL 251
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG + + WYVG+AQK++ERE +L+ +FEQ +K +G NLY+KNLDDSINDEKLK
Sbjct: 252 NGKKIDGEEWYVGKAQKKSERELELKGRFEQSMKETVDKFQGLNLYIKNLDDSINDEKLK 311
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
ELFS+FG ITSCKVM D G S+GSGF AFS PEEA+RAL EMNGKM+ KPLYVA+AQR
Sbjct: 312 ELFSDFGAITSCKVMRDPSGISRGSGFVAFSTPEEASRALAEMNGKMLISKPLYVALAQR 371
Query: 388 KEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAG 446
KEER+ARLQAQF+Q+R P M+P +AS +P Y GAP +G QQ YGQG P +MPPQ AG
Sbjct: 372 KEERRARLQAQFSQMR-PVTMAPSVASRMPMYPPGAPGMG-QQFLYGQGPPAMMPPQ-AG 428
Query: 447 YGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQP-----QFMR 498
+G+QQQ+ PG+RPGG PN+ +P Q Q + G R G Q QQP Q M
Sbjct: 429 FGYQQQLVPGMRPGGAPMPNFFVPLVQQGQQG-QRPGGRRGGGPVQQTQQPVPLMQQQML 487
Query: 499 NSNQGIRYLDNARNGTDQSVV----SMVPVPFEVSGMPATPVETPRPVPVPISTLTSALA 554
+ RY RN D + M+ VP+++ GMP P+PI+ L +ALA
Sbjct: 488 PRGRVYRY-PPGRNMPDVPMPGVAGGMLSVPYDMGGMPIRDAAQ----PMPITALATALA 542
Query: 555 SASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAM 614
+A+P+ + MLGE LYP+V+ +E A+KVTGMLLEMDQTEVLHL+ESPEALK KVAEAM
Sbjct: 543 NATPEQQRTMLGESLYPIVDQLEHDSAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAM 602
Query: 615 AVLQEAAARSDVN---EKLGSLAVNE 637
VL+ AA+ +N ++LGSL++N+
Sbjct: 603 EVLRTVAAQQQINNQADQLGSLSLND 628
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ ++LY+ +L+ ++N+ +L +LFS + S +V RD S S G +V +S P++A+
Sbjct: 291 FQGLNLYIKNLDDSINDEKLKELFSDFGAITSCKVMRDPSGISR-GSGFVAFSTPEEASR 349
Query: 85 AKEALNFMPINGKPIRIMYSHR 106
A +N + KP+ + + R
Sbjct: 350 ALAEMNGKMLISKPLYVALAQR 371
>gi|357475273|ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
gi|355508977|gb|AES90119.1| Poly(A)-binding protein [Medicago truncatula]
Length = 654
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/605 (60%), Positives = 444/605 (73%), Gaps = 17/605 (2%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL+ NV +SQLYDLF+Q+ QVVSVRVCRD + R SLGY YVNYSNPQDAA A +
Sbjct: 34 TSLYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALD 93
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LNF P+N +PIRIMYSHRDPSIRKSG GN+FIKNLD +ID+KAL DTF++FG +LSCKV
Sbjct: 94 VLNFTPLNNRPIRIMYSHRDPSIRKSGQGNIFIKNLDKAIDHKALHDTFSSFGNILSCKV 153
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A+D +GQSKGYGFVQF+ EEAAQ AI+ LNGML+NDKQVYVG F+R+QER KF
Sbjct: 154 AVDGSGQSKGYGFVQFDTEEAAQKAIEKLNGMLLNDKQVYVGPFLRKQERESTGDRAKFN 213
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NV+V NL+E+ TD++LKK FG FGTITSA+VM+D DGKS+CFGFVNF+S D AA AVE L
Sbjct: 214 NVFVKNLSESTTDDELKKTFGEFGTITSAVVMRDGDGKSKCFGFVNFESTDDAARAVEAL 273
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG +DK WYVG+AQK++ERE +L+ KFEQ +K +GANLY+KNLDDSI DEKLK
Sbjct: 274 NGKKIDDKEWYVGKAQKKSEREHELKIKFEQSMKEAADKYQGANLYVKNLDDSIADEKLK 333
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
ELFS +GTITSCKVM D +G S+GSGF AFS PEEA+RAL EMNGKM+ KPLYV +AQR
Sbjct: 334 ELFSSYGTITSCKVMRDPNGVSRGSGFVAFSTPEEASRALLEMNGKMVASKPLYVTLAQR 393
Query: 388 KEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAG 446
KE+R+ARLQAQFAQ+R P M P +A +P Y G P +G QQ++YGQG P ++P Q G
Sbjct: 394 KEDRRARLQAQFAQMR-PVSMPPSVAPRMPMYPPGGPGMG-QQIFYGQGPPAIIPSQ-PG 450
Query: 447 YGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ---QPQFMRNS 500
+G+QQQ+ PG+RPGG PN+ +P Q Q Q PQ M
Sbjct: 451 FGYQQQLVPGMRPGGAPVPNFFVPMVQQGQQGQRPGGRRGGGVQQSQQPVPLMPQQMLPR 510
Query: 501 NQGIRYLDNARNGTDQSVV----SMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASA 556
+ RY R D + M VP++V GMP + +PI L S LA+A
Sbjct: 511 GRVYRY-PPGRGMPDGPMPGVAGGMYSVPYDVGGMPIRDASLSQ--QIPIGALASHLANA 567
Query: 557 SPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAV 616
SP+ + MLGE LYPLVE +EP +A+KVTGMLLEMDQTEVLHL+ESPEALK KVAEAM V
Sbjct: 568 SPEQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMDV 627
Query: 617 LQEAA 621
L+ A
Sbjct: 628 LRNVA 632
>gi|317106694|dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/646 (57%), Positives = 467/646 (72%), Gaps = 35/646 (5%)
Query: 7 AAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKR 66
+A V++ VP+ SLYVGDLEQNV E+QLYDLF+Q QVVS+RVCRD + R
Sbjct: 13 SAPNGVVSNGVNQFVPT-----SLYVGDLEQNVTETQLYDLFNQHGQVVSIRVCRDLTSR 67
Query: 67 SSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTS 126
SLGY YVNY+N DAA A E LNF P+NGKPIRIMYS+RDP+IRKSG GN++IKNLD +
Sbjct: 68 RSLGYGYVNYNNVHDAAQAIEVLNFTPVNGKPIRIMYSYRDPTIRKSGTGNIYIKNLDKA 127
Query: 127 IDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQV 186
IDNKAL DTF+AFG++LSCKVA DS GQS GYGFVQF+NEE+A+NAI LNGML+NDKQV
Sbjct: 128 IDNKALHDTFSAFGSILSCKVATDSLGQSLGYGFVQFDNEESAKNAIDKLNGMLLNDKQV 187
Query: 187 YVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKS 246
YVG F+R+QER F NVYV NL+ET T+EDLKKIFG +GTITSA+VM+D +GKS
Sbjct: 188 YVGPFLRKQERESAIDKATFNNVYVKNLSETTTEEDLKKIFGEYGTITSAVVMRDGNGKS 247
Query: 247 RCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK 306
RCFGFVNF++PD AA +VE LNG T ++K WYVG+AQK++ERE +L+ +FEQ +K
Sbjct: 248 RCFGFVNFENPDDAAQSVEALNGKTFDEKEWYVGKAQKKSEREVELKGRFEQTLKETVDK 307
Query: 307 LKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRA 366
+G NLY+KNLDDSI D+KLKELFSEFGTITSCKVM D +G S+GSGF AFS EEA+RA
Sbjct: 308 FQGLNLYVKNLDDSITDDKLKELFSEFGTITSCKVMRDPNGVSRGSGFVAFSTAEEASRA 367
Query: 367 LNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLG 426
L EMNGKM+ KPLYVA+AQRKEER+ARLQAQ++QIR P P+ +P Y G P +G
Sbjct: 368 LTEMNGKMVVSKPLYVALAQRKEERRARLQAQYSQIR-PAMAPPIGPRMPIYPPGTPGIG 426
Query: 427 PQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPG---QRTGVR 483
QL+YGQG P ++PPQ G+G+QQQ+ PG+R PN+ +P V PG QR R
Sbjct: 427 -HQLFYGQGPPAIVPPQ-PGFGYQQQLVPGMR---PNFFVP-----MVQPGQQAQRPSGR 476
Query: 484 RSG-------NTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVV----SMVPVPFEVSGMP 532
RSG M QPQ M + RY R+ D + M+PVP+++ GMP
Sbjct: 477 RSGAGAVQPQQPLPMMQPQ-MLPRGRVYRY-PPGRSMPDVPMAGLPGGMLPVPYDMGGMP 534
Query: 533 ATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMD 592
+ PV L +ALA+A P+ + +LGE LYPLV+ +E +A+KVTGMLLEMD
Sbjct: 535 FR--DGAFSQPVQTGALATALANAMPEQQRTLLGENLYPLVDQLEHENAAKVTGMLLEMD 592
Query: 593 QTEVLHLIESPEALKTKVAEAMAVLQEAAARSDV-NEKLGSLAVNE 637
QTEVLHL+ESPE+LK KVAEAM VL+ + + +++ +L++N+
Sbjct: 593 QTEVLHLLESPESLKAKVAEAMEVLRTVQQQVNSPTDRMATLSLND 638
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/625 (59%), Positives = 460/625 (73%), Gaps = 23/625 (3%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL+ NV +SQLYDLF+Q+ QVVSVRVCRD + + SLGY YVNY NPQDAA A E
Sbjct: 28 SLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARALEV 87
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF P++GKPIRIMYS+RDP+IR+SG GN+FIKNLD +ID+KAL DTF+AFG +LSCKVA
Sbjct: 88 LNFTPLHGKPIRIMYSNRDPTIRRSGNGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVA 147
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
+DS+GQSKGYGFVQ+++EEAAQ AI+ LNGML+NDKQVYVG FVR+ ER +FTN
Sbjct: 148 VDSSGQSKGYGFVQYDSEEAAQKAIEKLNGMLLNDKQVYVGPFVRKHERDMAVDKTRFTN 207
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V NL+E+ +E+L+KIFG FG ITS VMKD DGKSRCFGFVNF++ + AA AVE LN
Sbjct: 208 VFVKNLSESTLEEELRKIFGEFGAITSVAVMKDEDGKSRCFGFVNFENAEDAARAVEALN 267
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G ++K W+VGRAQK++ERE +L+ +FEQ +K +G NLY+KNLDDSI+DEKLKE
Sbjct: 268 GYKLDNKDWFVGRAQKKSEREMELKHRFEQSAKEAVDKSQGLNLYIKNLDDSISDEKLKE 327
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRK 388
LFS +GTITSCKVM D G SKGSGF AFS PEEA+RAL+EMNGKM+ KPLYVA+AQRK
Sbjct: 328 LFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPEEASRALSEMNGKMVVSKPLYVALAQRK 387
Query: 389 EERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYG 448
EER+ARLQAQF+Q+R S +A +P Y G P LG QQ++YGQ P ++PPQ AG+G
Sbjct: 388 EERRARLQAQFSQMRPIAMASSVAPRMPMYPPGGPGLG-QQIFYGQPQPAMLPPQ-AGFG 445
Query: 449 FQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQP-----QFMRNS 500
+QQQ+ PG+RPGG PN+ MP Q Q + Q QQP Q M
Sbjct: 446 YQQQLVPGMRPGGGPMPNFFMPMVQQGQQGQRPGGRRGGAVPLQQGQQPVPLMQQQMFPR 505
Query: 501 NQGIRY------LDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALA 554
+G RY D A G + S +P+++ GMP +P+PV L +ALA
Sbjct: 506 GRGYRYPPGRGLPDVAFPGVGGGMFS---IPYDMGGMPVRDAGIVQPIPV--GALATALA 560
Query: 555 SASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAM 614
++SP ++ MLGE LYPLVE +EP A+KVTGMLLEMDQTEVLHL+ESPEALK KVAEAM
Sbjct: 561 NSSPTEQRTMLGENLYPLVEQLEPETAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAM 620
Query: 615 AVLQEAAARSDVN--EKLGSLAVNE 637
VL+ + + N ++L SL++N+
Sbjct: 621 EVLRNVSQQQSSNPADQLASLSLND 645
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 98/186 (52%), Gaps = 17/186 (9%)
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-SDGKSRCFGFVNFQSPDAAAAAVE 265
T++YV +L VTD L +F G + S V +D + +S +G+VN+ +P AA A+E
Sbjct: 27 TSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARALE 86
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LN T + K + + R+ +R + N+++KNLD +I+ +
Sbjct: 87 VLNFTPLHGKPIRI----MYSNRDPTIR------------RSGNGNIFIKNLDKAIDHKA 130
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L + FS FG I SCKV VD G SKG GF + E A +A+ ++NG ++ K +YV
Sbjct: 131 LHDTFSAFGNILSCKVAVDSSGQSKGYGFVQYDSEEAAQKAIEKLNGMLLNDKQVYVGPF 190
Query: 386 QRKEER 391
RK ER
Sbjct: 191 VRKHER 196
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++LY+ +L+ ++++ +L +LFS + S +V RD S S G +V +SNP++A+ A
Sbjct: 309 LNLYIKNLDDSISDEKLKELFSPYGTITSCKVMRDPSGVSK-GSGFVAFSNPEEASRALS 367
Query: 88 ALNFMPINGKPIRIMYSHR 106
+N + KP+ + + R
Sbjct: 368 EMNGKMVVSKPLYVALAQR 386
>gi|356499763|ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 646
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/628 (59%), Positives = 466/628 (74%), Gaps = 23/628 (3%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ SLYVGDL+ NV ++QLYDLF+Q+ QVVSVRVCRD + R SLGY YVN+SNPQDAA
Sbjct: 25 FVTTSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAAR 84
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + LNF P+N +PIRIMYSHRDPSIRKSG GN+FIKNLD +ID+KAL DTF+ FG +LS
Sbjct: 85 ALDVLNFTPLNNRPIRIMYSHRDPSIRKSGQGNIFIKNLDRAIDHKALHDTFSTFGNILS 144
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA DS+GQSKGYGFVQF+NEE+AQ AI+ LNGML+NDKQVYVG F+R+QER
Sbjct: 145 CKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGPFLRKQERESTADKA 204
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
KF NV+V NL+E+ TD++LK +FG FGTITSA+VM+D DGKS+CFGFVNF++ D AA AV
Sbjct: 205 KFNNVFVKNLSESTTDDELKNVFGEFGTITSAVVMRDGDGKSKCFGFVNFENADDAARAV 264
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
E LNG +DK WYVG+AQK++ERE +L+ +FEQ +K +GANLY+KNLDDS+ D+
Sbjct: 265 EALNGKKFDDKEWYVGKAQKKSERENELKQRFEQSMKEAADKYQGANLYVKNLDDSLGDD 324
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KLKELFS FGTITSCKVM D +G S+GSGF AFS P+EA+RAL EMNGKM+ KPLYV +
Sbjct: 325 KLKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALLEMNGKMVVSKPLYVTL 384
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQ 443
AQRKE+R+ARLQAQFAQ+R P GM P + +P Y G P +G QQ++Y QG P ++P Q
Sbjct: 385 AQRKEDRRARLQAQFAQMR-PVGMPPSVGPRVPMYPPGGPGIG-QQIFYAQGPPAIIPSQ 442
Query: 444 AAGYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQ-----PQ 495
G+G+QQQ+ PG+RPG PN+ +P + +Q GQR G RR+G Q QQ PQ
Sbjct: 443 -PGFGYQQQLVPGMRPGAAPVPNFFVP--MVQQGQQGQRPGGRRTGAVQQSQQPVPMMPQ 499
Query: 496 FMRNSNQGIRYLDNARNGTDQSVV----SMVPVPFEVSGMPATPVETPRPVPVPISTLTS 551
M + RY R D S+ M VP++V GMP + +PV L +
Sbjct: 500 QMLPRGRVYRY-PPGRGMPDVSMPGVAGGMFSVPYDVGGMPLRDASISQQIPV--GALAT 556
Query: 552 ALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVA 611
ALA+ASP+ + MLGE LYPLVE +EP +A+KVTGMLLEMDQTEVLHL+ESPEALK KVA
Sbjct: 557 ALANASPEQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVA 616
Query: 612 EAMAVLQEAAAR--SDVNEKLGSLAVNE 637
EAM VL+ A + ++L SL++N+
Sbjct: 617 EAMDVLRNVAQQQAGGTADQLASLSLND 644
>gi|400234898|gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/626 (58%), Positives = 459/626 (73%), Gaps = 29/626 (4%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL+ NV +SQLYDLF+Q+ QVVSVRVCRD + + SLGY YVNY NPQDAA A E
Sbjct: 27 TSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARALE 86
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LNF P++GKPIRIMYS+RDP+IR+SG GN+FIKNLD +ID+KAL DTF+AFG +LSCKV
Sbjct: 87 VLNFTPLHGKPIRIMYSNRDPTIRRSGNGNIFIKNLDKAIDHKALHDTFSAFGNILSCKV 146
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A+DS+GQSKGYGFVQ++++EAAQ AI+ LNGML+NDKQVYVG FVR+QER +FT
Sbjct: 147 AVDSSGQSKGYGFVQYDSDEAAQKAIEKLNGMLLNDKQVYVGPFVRKQERDMAVDKTRFT 206
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NV+V NL+E+ +E+L+KIFG FGTITS VMKD DGKSRCFGFVNF++ + AA AVE L
Sbjct: 207 NVFVKNLSESTLEEELRKIFGEFGTITSVAVMKDEDGKSRCFGFVNFENAEDAARAVEAL 266
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG ++K W+VGRAQK++ERE +L+ +FEQ +K +G NLYLKNLDDSI+D+KLK
Sbjct: 267 NGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAQEAVDKSQGLNLYLKNLDDSISDDKLK 326
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
ELFS +GTITSCKVM D G SKGSGF AFS PEEA+RAL+EMNGKM+ KPLYVA+AQR
Sbjct: 327 ELFSPYGTITSCKVMRDPSGVSKGSGFVAFSTPEEASRALSEMNGKMVVSKPLYVALAQR 386
Query: 388 KEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGY 447
KEER+ARLQAQF+Q+R S +A +P Y G P LG QQ++YGQ P ++PPQ AG+
Sbjct: 387 KEERRARLQAQFSQMRPIAMASSVAPRMPMYPPGGPGLG-QQIFYGQPPPAMLPPQ-AGF 444
Query: 448 GFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQP-----QFMRN 499
G+QQQ+ PG+RPGG PN+ MP Q Q + Q QQP Q M
Sbjct: 445 GYQQQLVPGMRPGGGPMPNFFMPMVQQGQQGQRPGGRRGGAVPLQQGQQPVPLMQQQMFP 504
Query: 500 SNQGIRY------LDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSAL 553
+G RY D A G + S +P+++ G P+P+ L +AL
Sbjct: 505 RGRGYRYPPGRGLPDGAFPGVGGGMFS---IPYDIGGRIVQ--------PIPVGALATAL 553
Query: 554 ASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEA 613
A+ASP ++ MLGE LYPLVE +EP A+KVTGMLLEMDQTEVLHL+ESPEALK KVAEA
Sbjct: 554 ANASPTEQRTMLGENLYPLVEQLEPETAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEA 613
Query: 614 MAVLQEAAARSDVN--EKLGSLAVNE 637
M VL+ + + N ++L SL++N+
Sbjct: 614 MEVLRNVSQQQSSNPADQLASLSLND 639
>gi|3287682|gb|AAC25510.1| Strong similarity to gb|M97657 poly(A)-binding protein (PABP5) from
A. thaliana [Arabidopsis thaliana]
Length = 655
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/654 (57%), Positives = 469/654 (71%), Gaps = 44/654 (6%)
Query: 3 ATGAAAATA-----AVTSATTAAVPSG-------------YGNVSLYVGDLEQNVNESQL 44
ATG A AT + T+ T+ VP + N SLY GDL+ V E+ L
Sbjct: 6 ATGVAPATMVDQVPSPTAQTSVQVPVSIPLPSPVVVADQTHPNSSLYAGDLDPKVTEAHL 65
Query: 45 YDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYS 104
+DLF VA VVSVRVCRDQ++RS LGYAY+N+SNP DA A EALN+ P+ +PIRIM S
Sbjct: 66 FDLFKHVANVVSVRVCRDQNRRS-LGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLS 124
Query: 105 HRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFE 164
+RDPS R SG GN+FIKNLD SIDNKAL +TF++FGT+LSCKVA+D G+SKGYGFVQFE
Sbjct: 125 NRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFE 184
Query: 165 NEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA--QQNVSPKFTNVYVNNLAETVTDED 222
EE+AQ AI LNGML+NDKQV+VG F+RRQERA + +P+FTNVYV NL + + +++
Sbjct: 185 KEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDE 244
Query: 223 LKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRA 282
L+K FG FG I+SA+VM+D G SRCFGFVNF+ +AAA+AVEK+NG + D V YVGRA
Sbjct: 245 LRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRA 304
Query: 283 QKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVM 342
QK++ERE +LR KFEQERI+R+EK +GANLYLKNLDDS++DEKLKE+FSE+G +TS KVM
Sbjct: 305 QKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVM 364
Query: 343 VDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQI 402
++ G S+G GF A+S PEEA RAL+EMNGKMIGRKPLY+A+AQRKE+R+A L QI
Sbjct: 365 LNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKEDRRAHL-----QI 419
Query: 403 RAPGGMSPLASGIPGYHH---GAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRP 459
RAPG MS G+HH G PQ +Y GQ ++P Q GYGFQ Q PG+RP
Sbjct: 420 RAPGPMS-------GFHHPPGGPMPGPPQHMYVGQNGASMVPSQPIGYGFQPQFMPGMRP 472
Query: 460 G-GP-NYIMPYHLQRQVHPGQRTGVRRSGNT---HQMQQPQFMRNSNQGIRYLD---NAR 511
G GP N+I+PY LQRQ G R G RR H QQ RN + G+RY++ N R
Sbjct: 473 GSGPGNFIVPYPLQRQPQTGPRMGFRRGATNVQQHIQQQQLMHRNPSPGMRYMNGASNGR 532
Query: 512 NGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYP 571
NG D SV + P + A+ + + +PIS LTS+LASASP DRTRMLGEQLYP
Sbjct: 533 NGMDSSVPQGILPPIIPLPIDASSISHQKAPLLPISKLTSSLASASPADRTRMLGEQLYP 592
Query: 572 LVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSD 625
LVE EP+H +KVTGMLLEMDQ E+LHL+ESPEALK+KV+EA+ VL+ + +D
Sbjct: 593 LVERHEPLHVAKVTGMLLEMDQAEILHLMESPEALKSKVSEALDVLRLSVDPTD 646
>gi|168057049|ref|XP_001780529.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668007|gb|EDQ54623.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 647
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/632 (60%), Positives = 462/632 (73%), Gaps = 22/632 (3%)
Query: 22 PSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQD 81
P+ + + S+YVGDLE NV+E+QLY++FSQ VVS+RVCRD R SLGYAYVNY + QD
Sbjct: 18 PNQFVSTSVYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYHSAQD 77
Query: 82 AANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGT 141
A A E LNF P+NGKPIRIM+SHRDPS+RKSG N+FIKNLD +IDNKAL DTF+AFG
Sbjct: 78 ATRALELLNFTPVNGKPIRIMFSHRDPSLRKSGAANIFIKNLDKAIDNKALHDTFSAFGG 137
Query: 142 VLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQN 201
+LSCKVA DS+GQSKGYGFVQFE EE+AQ+AI+ +NGML+NDKQV+VG FVRRQER
Sbjct: 138 ILSCKVATDSSGQSKGYGFVQFEKEESAQSAIEKVNGMLLNDKQVFVGPFVRRQERDLSG 197
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
KF NVYV NL E TD++LKK+FG +G I+SA+VM+D++GKS+CFGFVNF+ D AA
Sbjct: 198 GVSKFNNVYVKNLGENTTDDELKKVFGAYGPISSAVVMRDNEGKSKCFGFVNFELADDAA 257
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AVE LNG ++K WYVGRAQK++EREA+LRAKFEQER SR EK +G NLYLKNLDD++
Sbjct: 258 KAVEALNGKKQDEKEWYVGRAQKKSEREAELRAKFEQERKSRIEKYQGVNLYLKNLDDAV 317
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DEKL+ELF+E+GTITSCKVM D G S+GSGF AFS PEEATRA+ EMN KM+G KPLY
Sbjct: 318 DDEKLRELFAEYGTITSCKVMKDPQGQSRGSGFVAFSTPEEATRAVTEMNTKMVGSKPLY 377
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMP 441
VA+AQRKEER+ RLQA FAQ+R P G + + + +P YH G P LGPQ YYGQ G +P
Sbjct: 378 VALAQRKEERRVRLQAAFAQMRTPVGPT-VPTSLPMYHPG-PGLGPQMPYYGQHPSGPIP 435
Query: 442 PQAAGYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRR-----SGNTHQMQQ 493
Q A +G+ Q+ +RPGG PNYI ++ + R Q QQ
Sbjct: 436 LQPAAFGYPPQI---MRPGGAQIPNYIGYPNVSLSQGQQGQRAGGRRGGAPQQQQQQSQQ 492
Query: 494 PQFMRNSNQGIRYLDNARNGTDQSVVS-------MVPVPFEVSGMPATPVETPRP-VPVP 545
R N+ RY N RN +D + M+PVP E+ GMPA V++ P P+P
Sbjct: 493 QMIQRGGNRNFRYTPNVRNASDGTAPPPQGMMGVMLPVPLEIGGMPAANVDSGVPQQPLP 552
Query: 546 ISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEA 605
IS L SALASA PD + MLGEQLYPLV+ +E A KVTGMLLEMDQTEVLHLIESPEA
Sbjct: 553 ISALASALASAPPDQQRAMLGEQLYPLVDQLEHEFAGKVTGMLLEMDQTEVLHLIESPEA 612
Query: 606 LKTKVAEAMAVLQEA-AARSDVNEKLGSLAVN 636
LK KV EAM VL+ A A S E+LG+L+++
Sbjct: 613 LKAKVNEAMEVLRMAQAVPSAPTEELGNLSIS 644
>gi|356521524|ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 651
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/628 (60%), Positives = 463/628 (73%), Gaps = 23/628 (3%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ SLYVGDL+ NV ++QLYDLF+Q+ QVVSVRVCRD + R SLGY YVN+SNPQDAA
Sbjct: 28 FVTTSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAAR 87
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + LNF P+N +PIRIMYSHRDPSIRKSG GN+FIKNLD +ID+KAL DTF+ FG +LS
Sbjct: 88 ALDVLNFTPLNNRPIRIMYSHRDPSIRKSGQGNIFIKNLDRAIDHKALHDTFSTFGNILS 147
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA DS+GQSKGYGFVQF+NEE+AQ AI+ LNGML+NDKQVYVG F+R+QER
Sbjct: 148 CKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGPFLRKQERESAADKA 207
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
KF NV+V NL+E+ TD++LK FG FGTITSA+VM+D DGKS+CFGFVNF++ D AA AV
Sbjct: 208 KFNNVFVKNLSESTTDDELKNTFGEFGTITSAVVMRDGDGKSKCFGFVNFENADDAARAV 267
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
E LNG +DK WYVG+AQK++ERE +L+ +FEQ +K +GANLY+KNLDDSI DE
Sbjct: 268 EALNGKNFDDKEWYVGKAQKKSERENELKQRFEQSMKEAADKYQGANLYVKNLDDSIGDE 327
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KLKELFS FGTITSCKVM D +G S+GSGF AFS PEEA+RAL EMNGKM+ KPLYV +
Sbjct: 328 KLKELFSPFGTITSCKVMRDPNGLSRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVTL 387
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQ 443
AQRKE+R+ARLQAQFAQ+R P GM P + +P Y G P +G QQL+Y QG P ++P Q
Sbjct: 388 AQRKEDRRARLQAQFAQMR-PVGMPPSVGPRVPMYPPGGPGIG-QQLFYSQGPPAIIPSQ 445
Query: 444 AAGYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQ-----PQ 495
G+G+QQQ+ PG+RPG PN+ +P + +Q GQR G RR G Q QQ PQ
Sbjct: 446 -PGFGYQQQLMPGMRPGAAPVPNFFVP--MVQQGQQGQRPGGRRPGAVQQSQQPVPMMPQ 502
Query: 496 FMRNSNQGIRYLDNARNGTDQSVV----SMVPVPFEVSGMPATPVETPRPVPVPISTLTS 551
M + RY R D + M VP++V GMP + +PV L +
Sbjct: 503 QMLPRGRVYRY-PPGRGIPDVPIPGVAGGMFSVPYDVGGMPLRDASISQQIPV--GALAT 559
Query: 552 ALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVA 611
ALA+ASP+ + MLGE LYPLVE +EP +A+KVTGMLLEMDQTEVLHL+ESPEALK KVA
Sbjct: 560 ALANASPEQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVA 619
Query: 612 EAMAVLQEAAAR--SDVNEKLGSLAVNE 637
EAM VL+ A + ++L SL++N+
Sbjct: 620 EAMDVLRNVAQQQAGGTADQLASLSLND 647
>gi|225438781|ref|XP_002283105.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|296082381|emb|CBI21386.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/629 (58%), Positives = 454/629 (72%), Gaps = 23/629 (3%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ + SLYVGDLE NV +S LYDLF Q+ VVSVRVCRD S R SLGY YVNY N QDAA
Sbjct: 29 FVSTSLYVGDLESNVTDSHLYDLFGQLGPVVSVRVCRDLSTRRSLGYGYVNYGNTQDAAR 88
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + LNF P+NGKPIRIMYS RDPSIR+SG N+FIKNLD +IDNKAL DTF+ FG +LS
Sbjct: 89 ALDMLNFTPLNGKPIRIMYSFRDPSIRRSGTANIFIKNLDKAIDNKALYDTFSTFGAILS 148
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CK+A D++GQSKGYGFVQF+NEE+A+NA LNGML+NDKQVYVG FVR+QER
Sbjct: 149 CKIATDASGQSKGYGFVQFDNEESAKNATDKLNGMLLNDKQVYVGPFVRKQERESATNKT 208
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
KF NVYV NL E+ TDEDLK IFG +G ITSA+VM+D DGKS+CFGFVNF++ D AA +V
Sbjct: 209 KFNNVYVKNLLESTTDEDLKNIFGEYGPITSAVVMQDGDGKSKCFGFVNFENADDAARSV 268
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
E LNG +DK WYVG+AQK+ ERE +L+ +FEQ +K +G NLY+KNLDDSI D+
Sbjct: 269 EALNGKKFDDKEWYVGKAQKKTEREVELKGRFEQSLKEAVDKFQGLNLYVKNLDDSIADD 328
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KL+ELFSEFGTITSCKVM D +G S+GSGF AFS EEA+RAL +MNGKM+ KPLYVA+
Sbjct: 329 KLRELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASRALADMNGKMVASKPLYVAL 388
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQ 443
AQRKE+R+ARLQAQF+Q+R P M+P + + Y GAP LG QQL+YGQG P L+PPQ
Sbjct: 389 AQRKEDRRARLQAQFSQMR-PAAMAPSVGPRMSMYPPGAPGLG-QQLFYGQGPPALIPPQ 446
Query: 444 AAGYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGN-----THQMQQPQ 495
G+G+Q Q+ PG+RPG PN+ +P + + P QR G RRSG T Q
Sbjct: 447 -PGFGYQHQLVPGMRPGAAPMPNFFVP--MVQPGQPNQRPGGRRSGTGPVQQTQQPLPLM 503
Query: 496 FMRNSNQGIRY-LDNARNGTDQSVV----SMVPVPFEVSGMPATPVETPRPVPVPISTLT 550
+ +G Y RN D + M+ P++++GMP + P+PI L
Sbjct: 504 QQQMLPRGRVYRYPPGRNMADVPIPGVPGGMLSAPYDMAGMPFRDAAVSQ--PMPIGALA 561
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
+ALA+A PD + +LGE LYPLV+ +E A+KVTGMLLEMDQTEVLHL+ESPEALK KV
Sbjct: 562 TALANAPPDQQRTLLGENLYPLVDQLEHEMAAKVTGMLLEMDQTEVLHLLESPEALKAKV 621
Query: 611 AEAMAVLQEAAARSDVN--EKLGSLAVNE 637
AEAM VL+ A + N +++ SL++N+
Sbjct: 622 AEAMEVLRNVAQQQANNPTDRMASLSLND 650
>gi|225458678|ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147773643|emb|CAN76464.1| hypothetical protein VITISV_017035 [Vitis vinifera]
Length = 640
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/636 (60%), Positives = 470/636 (73%), Gaps = 24/636 (3%)
Query: 19 AAVPSGYGNV-SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYS 77
A P+G N SLYVGDL+ N+ +SQLYDLF Q QV+SVRVCRD S R SLGY YVNYS
Sbjct: 8 VAGPNGVANTASLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYS 67
Query: 78 NPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFA 137
NPQDAA A + LNF P+NGKPIRIMYSHRDPSIRKSG N+FIKNLD SIDNKAL DTF+
Sbjct: 68 NPQDAARALDLLNFTPLNGKPIRIMYSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFS 127
Query: 138 AFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
AFG +LSCK+A D +GQSKGYGFVQF+NEE+AQNAI LNGMLINDKQVYVG F+R+QER
Sbjct: 128 AFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLNGMLINDKQVYVGQFLRKQER 187
Query: 198 AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
KF NVYV NL+E+ T+EDLK IFG FG ITS +VM+D DGKS+CFGFVNF++
Sbjct: 188 ETALNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFVNFENA 247
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
D AA AVE LNG ++K WYVG+AQK+ ERE +L+ +FEQ +K +G NLY+KNL
Sbjct: 248 DDAAEAVEALNGKKFDEKEWYVGKAQKKYERELELKGRFEQSMKEVVDKFQGVNLYIKNL 307
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
DDSI D+KLKELFSEFGTITSCKVM D G S+GSGF AFS EEA+RAL EMNGKM+
Sbjct: 308 DDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMNGKMVVS 367
Query: 378 KPLYVAVAQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGT 436
KPLYVA+AQRKEER+ARLQAQF+Q+R P M+P +A +P Y GAP LG QQL+YGQG
Sbjct: 368 KPLYVALAQRKEERRARLQAQFSQMR-PVSMAPSVAPRMPMYPPGAPGLG-QQLFYGQGP 425
Query: 437 PGLMPPQAAGYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQ 493
P ++PPQ AG+G+QQQ+ PG+RPGG PN+ +P +Q+ + G R +G Q QQ
Sbjct: 426 PAIIPPQ-AGFGYQQQLVPGMRPGGAPMPNFFVPL-VQQGQQGQRPGGRRGAGPVQQNQQ 483
Query: 494 P------QFMRNSNQGIRYLDNARNGTDQSVV----SMVPVPFEVSGMPATPVETPRPVP 543
P Q + + RY RN D + M+ +P+++ G+P + P
Sbjct: 484 PVPLMQQQMLPRGGRVYRY-PPGRNMPDVPMPGVAGGMLSIPYDMGGVPLRDAAIGQ--P 540
Query: 544 VPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESP 603
+PIS L SALA+A+PD + MLGE LYPLV+ +E A+KVTGMLLEMDQTEVLHL+ESP
Sbjct: 541 MPISALASALANATPDQQRTMLGESLYPLVDQLEHEMAAKVTGMLLEMDQTEVLHLLESP 600
Query: 604 EALKTKVAEAMAVLQEAAAR--SDVNEKLGSLAVNE 637
EALK+KVAEAM VL+ A + + E+L SL++N+
Sbjct: 601 EALKSKVAEAMDVLRNVAQQQANSPTEQLASLSLND 636
>gi|356564176|ref|XP_003550332.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 654
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/625 (59%), Positives = 462/625 (73%), Gaps = 24/625 (3%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL+QNVN+SQLYDLF+QV QVVSVRVCRD + R SLGY YVN+SNPQDAA A +
Sbjct: 35 TSLYVGDLDQNVNDSQLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNFSNPQDAARALD 94
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LNF P+N + IRIMYSHRDPS+RKSG N+FIKNLD +ID+KAL DTF++FG +LSCK+
Sbjct: 95 VLNFTPLNNRSIRIMYSHRDPSLRKSGTANIFIKNLDKAIDHKALHDTFSSFGLILSCKI 154
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A D++G SKGYGFVQF+NEEAAQNAI LNGMLINDKQVYVG F+R+Q+R KF
Sbjct: 155 ATDASGLSKGYGFVQFDNEEAAQNAIDKLNGMLINDKQVYVGHFLRKQDRENALSKTKFN 214
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NVYV NL+E+ TDE+L FG +GTITSA++M+D+DGKSRCFGFVNF++PD AA AVE L
Sbjct: 215 NVYVKNLSESTTDEELMINFGEYGTITSALIMRDADGKSRCFGFVNFENPDDAAKAVEGL 274
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG +DK WYVG+AQK++ERE +L+ +FEQ +K G NLYLKNLDD+I+DEKLK
Sbjct: 275 NGKKFDDKEWYVGKAQKKSEREQELKGRFEQSIKEAADKYPGLNLYLKNLDDTISDEKLK 334
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
E+F+++GTITSCKVM D G S+GSGF AFS PEEATRAL EMNGKM KPLYVA+AQR
Sbjct: 335 EMFADYGTITSCKVMRDPTGISRGSGFVAFSTPEEATRALGEMNGKMFAGKPLYVALAQR 394
Query: 388 KEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAG 446
KEER+ARLQAQF+Q+R P ++P +A +P Y GAP LG QQ YGQG P +MPPQ AG
Sbjct: 395 KEERRARLQAQFSQMR-PVAITPSVAPRMPLYPPGAPGLG-QQFLYGQGPPAMMPPQ-AG 451
Query: 447 YGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQG 503
+G+QQQ+ PG+RPGG P++ +P + +Q GQR RR Q Q Q
Sbjct: 452 FGYQQQLVPGMRPGGGPMPSFFVP--MVQQGQQGQRPVGRRGTGPVQQPQQPMPMMQQQM 509
Query: 504 I------RYLDNARNGTDQSVV----SMVPVPFEVSGMPATPVETPRPVPVPISTLTSAL 553
+ RY RN D + M+ VP+++ G+ P+ P+PI L +AL
Sbjct: 510 LPRGRVYRY-PPGRNMQDVPLQVAAGGMLSVPYDMGGL---PMRDAVGQPMPIQALATAL 565
Query: 554 ASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEA 613
A+A P+ + MLGE LYPLV+ +E A+KVTGMLLEMDQ EVLHLIESP+ALK KVAEA
Sbjct: 566 ANAPPEQQRTMLGEALYPLVDQLEHDSAAKVTGMLLEMDQPEVLHLIESPDALKAKVAEA 625
Query: 614 MAVLQEAA-ARSDVNEKLGSLAVNE 637
M VL+ A +++ ++L SL++N+
Sbjct: 626 MDVLRNVAQQQTNPADQLASLSLND 650
>gi|255538240|ref|XP_002510185.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550886|gb|EEF52372.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 658
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/629 (59%), Positives = 469/629 (74%), Gaps = 24/629 (3%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL+ NV +SQLYD+F+QV QVVSVRVCRD + R SLGY YVNY++PQDAA
Sbjct: 34 YMPTSLYVGDLDLNVTDSQLYDVFNQVGQVVSVRVCRDLTTRRSLGYGYVNYTSPQDAAR 93
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + LNF P N KPIRIMYSHRDPSIRKSG GN+FIKNLD +ID+KAL DTF++FG +LS
Sbjct: 94 ALDILNFTPFNNKPIRIMYSHRDPSIRKSGTGNIFIKNLDKTIDHKALHDTFSSFGNILS 153
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA DS+GQS+GYGFVQF+NEEAAQNAI LNGML+NDKQVYVG F+R+ ER + +
Sbjct: 154 CKVATDSSGQSRGYGFVQFDNEEAAQNAIDKLNGMLLNDKQVYVGHFLRKHERDSAS-NK 212
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
KF NVYV NL+E+ T+EDLK IFG +G ITSA++M+D+DGKS+CFGFVNF++ DAAA AV
Sbjct: 213 KFNNVYVKNLSESTTEEDLKNIFGEYGEITSAVIMRDADGKSKCFGFVNFENTDAAAKAV 272
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
E LNG +DK WYVG+AQK++ERE +L+++FEQ +K +G NLY+KNLDDSI+DE
Sbjct: 273 ESLNGKKIDDKEWYVGKAQKKSERELELKSQFEQSMKEAVDKYQGVNLYIKNLDDSISDE 332
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
LKELFS+FG ITSCKVM D G S+GSGF AFS PEEA+RAL EMNGKM+ KPLYVA+
Sbjct: 333 NLKELFSDFGMITSCKVMRDPSGISRGSGFVAFSTPEEASRALAEMNGKMVVSKPLYVAL 392
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQ 443
AQRKEER+ARLQAQF+Q+R P M+P + +P Y GAP +G QQ YGQG P ++PPQ
Sbjct: 393 AQRKEERRARLQAQFSQMR-PVAMAPSVGPRMPIYSPGAPGMG-QQFLYGQGPPTMIPPQ 450
Query: 444 AAGYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQP-----Q 495
G+G+QQQ+ PG+RPGG PN+ +P +Q+ + G R + Q QQP Q
Sbjct: 451 -GGFGYQQQLVPGIRPGGAPMPNFFVPM-VQQGQQGQRHGGRRGAVPVQQNQQPVPLMHQ 508
Query: 496 FMRNSNQGIRYLDNARNGTDQSVV----SMVPVPFEVSGMPATPVETPRPVPVPISTLTS 551
M + RY RN D + M+ VP+++ GMP + PVPI+ L +
Sbjct: 509 QMLPRGRVYRY-PPGRNMPDVPMPGVAGGMLSVPYDMGGMPIRDAAAGQ--PVPITALAT 565
Query: 552 ALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVA 611
ALA+ASP+ + +LGE LYPLV+ +E A+KVTGMLLEMDQTEVLHL+ESPEALK KVA
Sbjct: 566 ALANASPEHQRTLLGESLYPLVDQLEHESAAKVTGMLLEMDQTEVLHLLESPEALKAKVA 625
Query: 612 EAMAVLQEAAARSDVN---EKLGSLAVNE 637
EAM VL+ AA+ N ++L SL++N+
Sbjct: 626 EAMEVLRSVAAQQHANNTADQLTSLSLND 654
>gi|449438385|ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449495630|ref|XP_004159899.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 649
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/624 (59%), Positives = 467/624 (74%), Gaps = 21/624 (3%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL+ NV +SQLYDLF+QV QVVSVRVCRD + R SLGY YVNYSNP DA+ A +
Sbjct: 29 TSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDASRALD 88
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LNF P+NG PIR+MYSHRDPS+RKSG GN+FIKNLD +ID+KAL DTF+AFG++LSCKV
Sbjct: 89 VLNFTPLNGNPIRVMYSHRDPSVRKSGSGNIFIKNLDKAIDHKALHDTFSAFGSILSCKV 148
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A DS+GQSKG+GFVQF+ EEAA AI+ LNGML+NDKQV+VG F+R+QER + KF
Sbjct: 149 ATDSSGQSKGFGFVQFDTEEAALKAIEKLNGMLLNDKQVFVGPFLRKQERESVSEKTKFN 208
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NV+V NLAET ++EDLK +FG FG ITS +VM+D +GKS+CFGFVNF++ D AA +VE L
Sbjct: 209 NVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGEGKSKCFGFVNFENADDAARSVEAL 268
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG + K WYVG+AQK++ERE +L+++FEQ +K +GANLY+KNLDDSI+D+KLK
Sbjct: 269 NGKKVDGKEWYVGKAQKKSEREVELKSRFEQSVKEAADKYQGANLYVKNLDDSIDDDKLK 328
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
ELF+ FGTITSCKVM D +G S+GSGF AFS PEEA RAL EMNG+MI KPLYVA+AQR
Sbjct: 329 ELFTGFGTITSCKVMRDPNGISRGSGFVAFSSPEEAARALAEMNGRMIVSKPLYVALAQR 388
Query: 388 KEERKARLQAQFAQIRAPGGMSPLAS-GIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAG 446
KE+R+ARLQAQF+Q++ S +A G+P Y G P +G QQ++YGQ P ++ Q G
Sbjct: 389 KEDRRARLQAQFSQMQPMAMASSVAPRGMPMYPPGGPGIG-QQIFYGQAPPTIISSQ-PG 446
Query: 447 YGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQP-----QFMR 498
+G+QQQ+ PG+RPGG PN+ +P + +Q GQR+G RR+G Q QQP Q M
Sbjct: 447 FGYQQQLMPGMRPGGGPMPNFFVP--MVQQGQQGQRSGGRRAGAIQQTQQPVPLMQQQML 504
Query: 499 NSNQGIRYLDNARNGTDQSVV----SMVPVPFEVSGMPATPVETPRPVPVPISTLTSALA 554
+ RY R D + M VP+E+ GMP P + P PVP+ L SALA
Sbjct: 505 PRGRVYRY-PPGRGLPDLPMPGVAGGMFSVPYEMGGMP--PRDAVHPQPVPVGALASALA 561
Query: 555 SASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAM 614
+A+PD + MLGE LYPLVE +EP +A+KVTGMLLEMDQTEVLHL+ESPEALK KVAEAM
Sbjct: 562 NATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAM 621
Query: 615 AVLQEAAARS-DVNEKLGSLAVNE 637
VL+ A +S + ++L SL++ +
Sbjct: 622 EVLRSVAQQSGNAADQLASLSLTD 645
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 26/200 (13%)
Query: 198 AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-SDGKSRCFGFVNFQS 256
A Q+V+ T++YV +L VTD L +F G + S V +D + +S +G+VN+ +
Sbjct: 23 ANQHVT---TSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSN 79
Query: 257 PDAAAAAVEKLNGTTNND---KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLY 313
P A+ A++ LN T N +V Y + R+ +R K N++
Sbjct: 80 PVDASRALDVLNFTPLNGNPIRVMY-------SHRDPSVR------------KSGSGNIF 120
Query: 314 LKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGK 373
+KNLD +I+ + L + FS FG+I SCKV D G SKG GF F E A +A+ ++NG
Sbjct: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVATDSSGQSKGFGFVQFDTEEAALKAIEKLNGM 180
Query: 374 MIGRKPLYVAVAQRKEERKA 393
++ K ++V RK+ER++
Sbjct: 181 LLNDKQVFVGPFLRKQERES 200
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y +LYV +L+ ++++ +L +LF+ + S +V RD + S G +V +S+P++AA
Sbjct: 308 YQGANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISR-GSGFVAFSSPEEAAR 366
Query: 85 AKEALNFMPINGKPIRIMYSHR 106
A +N I KP+ + + R
Sbjct: 367 ALAEMNGRMIVSKPLYVALAQR 388
>gi|302754900|ref|XP_002960874.1| hypothetical protein SELMODRAFT_21095 [Selaginella moellendorffii]
gi|302767436|ref|XP_002967138.1| hypothetical protein SELMODRAFT_10868 [Selaginella moellendorffii]
gi|300165129|gb|EFJ31737.1| hypothetical protein SELMODRAFT_10868 [Selaginella moellendorffii]
gi|300171813|gb|EFJ38413.1| hypothetical protein SELMODRAFT_21095 [Selaginella moellendorffii]
Length = 619
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/628 (60%), Positives = 469/628 (74%), Gaps = 28/628 (4%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ + SLYVGDL+ NV+E+QLYDLF+Q+ QV+S+RVCRD R SLGYAYVNY+N QDA
Sbjct: 1 FVSTSLYVGDLDPNVSENQLYDLFNQIGQVLSIRVCRDLMTRRSLGYAYVNYNNVQDATR 60
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A E LNF P+NGK +RIM+SHRDPSIRKSG N+FIKNLD +IDNKAL DTF +FG +LS
Sbjct: 61 ALELLNFTPVNGKAVRIMFSHRDPSIRKSGTANIFIKNLDRAIDNKALHDTFVSFGNILS 120
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA DSNGQSKGYGFVQFE EE+AQ AI +NGML+ +KQV+VG FVRRQER Q
Sbjct: 121 CKVATDSNGQSKGYGFVQFEQEESAQVAIDKVNGMLVAEKQVFVGPFVRRQEREQNG--- 177
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
KF NV+V NL E+ TD++LK++FG FG ITSA+VM+DSDGKS+CFGFVNF++PD AA AV
Sbjct: 178 KFNNVFVKNLGESTTDDELKEVFGAFGKITSAVVMRDSDGKSKCFGFVNFENPDEAAKAV 237
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
LNG DK WYVGRAQK++EREA+LRAK+EQER R ++ +GANLYLKNLDD ++DE
Sbjct: 238 VGLNGKKIEDKEWYVGRAQKKSEREAELRAKYEQERKERIDRYQGANLYLKNLDDDVDDE 297
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
+L+E+F++FG+ITSCKVM D G SKGSGF A+S PEEA RA EMNGKMIG KP+YVA+
Sbjct: 298 RLREIFADFGSITSCKVMRDAQGQSKGSGFVAYSAPEEANRATIEMNGKMIGSKPIYVAM 357
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQA 444
AQRKEER+A+LQAQFAQ+R+P G +A+ +P YH GAP LG QQL+YGQ P LMPPQ
Sbjct: 358 AQRKEERRAKLQAQFAQMRSPVG---VATTMPMYHPGAPGLG-QQLFYGQ-PPALMPPQP 412
Query: 445 AGYGFQQQVFPGLRPGG---PNYIMPYHLQRQ--------VHPGQRTGVRRSGNTHQMQQ 493
AG+ +QQQ+ G+RPGG P+Y +P +QRQ +
Sbjct: 413 AGFAYQQQML-GMRPGGGQLPSYFVPV-VQRQGPQGGQRAAGARRGAAGTPVPQQQLPPP 470
Query: 494 PQFMRNSNQGIRYLDNARNGTDQSV----VSMVPVPFEVSGMPATPVETPRPVPVPISTL 549
Q M N+ RY +ARN + V V+++PVP E+ +P T +P P +PI L
Sbjct: 471 QQQMIRGNRNFRYTPSARNTPEVPVPPQLVNVLPVPLEIPSVPLT-PVSPLPPSLPIGAL 529
Query: 550 TSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTK 609
SALASASP+ + MLGEQLYPLV+ +E HA KVTGMLLEMDQTE+LHL+E+P+ALK K
Sbjct: 530 ASALASASPEHQRVMLGEQLYPLVDQLEHDHAGKVTGMLLEMDQTEILHLLEAPDALKAK 589
Query: 610 VAEAMAVLQEAAARSDVNEKLGSLAVNE 637
VAEAM VL++ A RS E L SL++NE
Sbjct: 590 VAEAMEVLRQ-AQRSPSTE-LASLSLNE 615
>gi|449445890|ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 654
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/601 (60%), Positives = 450/601 (74%), Gaps = 16/601 (2%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL+ NV +SQLYD+F+QV QVVSVRVCRD + R SLGY YVNYSNPQDAA A +
Sbjct: 30 SLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALDV 89
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF P+NGKPIR+MYSHRDPSIRKSG GN+FIKNLD +ID+KAL DTF+AFG++LSCKVA
Sbjct: 90 LNFTPLNGKPIRVMYSHRDPSIRKSGAGNIFIKNLDKAIDHKALHDTFSAFGSILSCKVA 149
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
+DS+GQSKGYGFVQF+NEE+A AI+ LNGML+NDKQVYVG F+R+QER KF N
Sbjct: 150 LDSSGQSKGYGFVQFDNEESALKAIEKLNGMLLNDKQVYVGPFLRKQERDGVVDKSKFNN 209
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V NL+ET T+EDL K F FGT+TS +VM+D+DGKSRCFGFVNF++ D AA AV+ LN
Sbjct: 210 VFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGKSRCFGFVNFENADDAARAVDTLN 269
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G +DK WYVG+AQK++ERE +L+ +FEQ +K +GANLY+KNLDDSI D+KLKE
Sbjct: 270 GKLVDDKEWYVGKAQKKSEREVELKHRFEQTMKEAADKYQGANLYIKNLDDSIGDDKLKE 329
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRK 388
LF+ FGTITSCKVM D +G S+GSGF AFS P+EA+RAL EMNGKM+ KPLYVA+AQRK
Sbjct: 330 LFAPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALVEMNGKMVVSKPLYVALAQRK 389
Query: 389 EERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYG 448
E+R+ARLQAQF+QIR+ + +A +P Y G P +G QQL+YGQ P ++P Q G+G
Sbjct: 390 EDRRARLQAQFSQIRSVPMPASVAPRMPIYPPGGPGIG-QQLFYGQAPPAMIPSQ-GGFG 447
Query: 449 FQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRT----GVRRSGNTHQMQQPQFMRNSN 501
+QQQ+ PG+RPGG PN+ +P Q Q V+++ M Q Q +
Sbjct: 448 YQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRPGGRRAGAVQQTQQPVPMMQQQMLPRGG 507
Query: 502 QGIRYLDNARNGTDQSVV----SMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASAS 557
+ RY R D ++ M VP+++ GMP + P+PI L SALA+A+
Sbjct: 508 RVYRY-PPGRGLPDVAMPGVAGGMFSVPYDMGGMPLR--DAAHSQPIPIGALASALANAT 564
Query: 558 PDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVL 617
PD + MLGE LYPLVE +EP +A+KVTGMLLEMDQTEVLHL+ESPEALK KVAEAM VL
Sbjct: 565 PDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 624
Query: 618 Q 618
+
Sbjct: 625 R 625
>gi|7528270|gb|AAF63202.1|AF240679_1 poly(A)-binding protein [Cucumis sativus]
Length = 649
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/624 (59%), Positives = 466/624 (74%), Gaps = 21/624 (3%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL+ NV +SQLYDLF+QV QVVSVRVCRD + R SLGY YVNYSNP DA+ A +
Sbjct: 29 TSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDASRALD 88
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LNF P+NG PIR+MYSHRDPS+RKSG GN+FIKNLD +ID+KAL DTF+AFG++LSCKV
Sbjct: 89 VLNFTPLNGNPIRVMYSHRDPSVRKSGSGNIFIKNLDKAIDHKALHDTFSAFGSILSCKV 148
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A DS+GQSKG+GFVQF+ EEAA AI+ LNGML+NDKQV+VG F+R+QER + KF
Sbjct: 149 ATDSSGQSKGFGFVQFDTEEAALKAIEKLNGMLLNDKQVFVGPFLRKQERESVSEKTKFN 208
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NV+V NLAET ++EDLK +FG FG ITS +VM+D +GKS+CFGFVNF++ D AA +VE L
Sbjct: 209 NVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGEGKSKCFGFVNFENADDAARSVEAL 268
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG + K WYVG+AQK++ERE +L+++FEQ +K +GANLY+KNLDDSI+D+KLK
Sbjct: 269 NGKKVDGKEWYVGKAQKKSEREVELKSRFEQSVKEAADKYQGANLYVKNLDDSIDDDKLK 328
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
ELF+ FGTITSCKVM D +G S+GSGF AFS PEEA RAL EMNG+MI KPLYVA+AQR
Sbjct: 329 ELFTGFGTITSCKVMRDPNGISRGSGFVAFSSPEEAARALAEMNGRMIVSKPLYVALAQR 388
Query: 388 KEERKARLQAQFAQIRAPGGMSPLAS-GIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAG 446
KE+R ARLQAQF+Q++ S +A G+P Y G P +G QQ++YGQ P ++ Q G
Sbjct: 389 KEDRIARLQAQFSQMQPMAMASSVAPRGMPMYPPGGPGIG-QQIFYGQAPPTIISSQ-PG 446
Query: 447 YGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQP-----QFMR 498
+G+QQQ+ PG+RPGG PN+ +P + +Q GQR+G RR+G Q QQP Q M
Sbjct: 447 FGYQQQLMPGMRPGGGPMPNFFVP--MVQQGQQGQRSGGRRAGAIQQTQQPVPLMQQQML 504
Query: 499 NSNQGIRYLDNARNGTDQSVV----SMVPVPFEVSGMPATPVETPRPVPVPISTLTSALA 554
+ RY R D + M VP+E+ GMP P + P PVP+ L SALA
Sbjct: 505 PRGRVYRY-PPGRGLPDLPMPGVAGGMFSVPYEMGGMP--PRDAVHPQPVPVGALASALA 561
Query: 555 SASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAM 614
+A+PD + MLGE LYPLVE +EP +A+KVTGMLLEMDQTEVLHL+ESPEALK KVAEAM
Sbjct: 562 NATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAM 621
Query: 615 AVLQEAAARS-DVNEKLGSLAVNE 637
VL+ A +S + ++L SL++ +
Sbjct: 622 EVLRSVAQQSGNAADQLASLSLTD 645
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 26/200 (13%)
Query: 198 AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-SDGKSRCFGFVNFQS 256
A Q+V+ T++YV +L VTD L +F G + S V +D + +S +G+VN+ +
Sbjct: 23 ANQHVT---TSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSN 79
Query: 257 PDAAAAAVEKLNGTTNND---KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLY 313
P A+ A++ LN T N +V Y + R+ +R K N++
Sbjct: 80 PVDASRALDVLNFTPLNGNPIRVMY-------SHRDPSVR------------KSGSGNIF 120
Query: 314 LKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGK 373
+KNLD +I+ + L + FS FG+I SCKV D G SKG GF F E A +A+ ++NG
Sbjct: 121 IKNLDKAIDHKALHDTFSAFGSILSCKVATDSSGQSKGFGFVQFDTEEAALKAIEKLNGM 180
Query: 374 MIGRKPLYVAVAQRKEERKA 393
++ K ++V RK+ER++
Sbjct: 181 LLNDKQVFVGPFLRKQERES 200
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y +LYV +L+ ++++ +L +LF+ + S +V RD + S G +V +S+P++AA
Sbjct: 308 YQGANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISR-GSGFVAFSSPEEAAR 366
Query: 85 AKEALNFMPINGKPIRIMYSHR 106
A +N I KP+ + + R
Sbjct: 367 ALAEMNGRMIVSKPLYVALAQR 388
>gi|317106693|dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas]
Length = 642
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/628 (59%), Positives = 465/628 (74%), Gaps = 34/628 (5%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVGDLEQNV E+QLYDLF+Q+ Q+VS+RVCRD + R SLGY YVNY+N DAA A
Sbjct: 28 STSLYVGDLEQNVTETQLYDLFNQLGQIVSIRVCRDLTSRRSLGYGYVNYNNVHDAAQAL 87
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LNF P+NGKPIRIMYS+RDP+IRKSG GN++IKNLD +IDNKAL DTF+AFG +LSCK
Sbjct: 88 EVLNFTPVNGKPIRIMYSYRDPTIRKSGAGNIYIKNLDKAIDNKALHDTFSAFGNILSCK 147
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF 206
VA DS GQS GYGFVQF+NEE+A+NAI LNGML+NDKQVYVG F+RRQER KF
Sbjct: 148 VATDSAGQSLGYGFVQFDNEESAKNAIDKLNGMLLNDKQVYVGPFLRRQERESGTDKTKF 207
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
NVYV NL+ET T+EDLKKIFG +G ITSA+VM+D DGKSRCFGFVNF++PD AA +VE
Sbjct: 208 NNVYVKNLSETTTEEDLKKIFGEYGAITSAVVMRDGDGKSRCFGFVNFENPDDAARSVEA 267
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
LNG T ++K WYVG+AQK++ERE +L+ +FEQ +K +G NLY+KNLDDSI D+KL
Sbjct: 268 LNGKTFDEKEWYVGKAQKKSEREVELKGQFEQTLKETVDKFEGLNLYVKNLDDSITDDKL 327
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
KELFSEFGTITSCKVM D +G SKGSGF A+S EEA++AL EMNGKMI KPLYVA+AQ
Sbjct: 328 KELFSEFGTITSCKVMRDPNGVSKGSGFVAYSTAEEASKALTEMNGKMIVSKPLYVALAQ 387
Query: 387 RKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAA 445
RKEER+ARLQAQF+Q+R M+P + +P Y HG P +G QQL+YGQG P ++PPQ
Sbjct: 388 RKEERRARLQAQFSQMRP--AMAPAVGPRMPMYPHGTPGIG-QQLFYGQGPPAIVPPQ-P 443
Query: 446 GYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPG---QRTGVRRSG-------NTHQMQQPQ 495
G+G+QQQ+ PG+R PN+ +P V PG QR RRSG M QPQ
Sbjct: 444 GFGYQQQLVPGMR---PNFFVP-----MVQPGQQAQRPSGRRSGAGPVQPQQPLPMMQPQ 495
Query: 496 FMRNSNQGIRYLDNARNGTDQSVV----SMVPVPFEVSGMPATPVETPRPVPVPISTLTS 551
M + RY R+ D + M+PVP+++ GMP + P+ L +
Sbjct: 496 -MLPRGRVYRY-PPGRSMPDVPMAGLPGGMLPVPYDMGGMPFR--DGAFSQPMQTGALAT 551
Query: 552 ALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVA 611
ALA+A+P+ + +LGE LYPLV+ +E +A+KVTGMLLEMDQTEVLHL+ESPE+L+ KVA
Sbjct: 552 ALANATPEQQRTLLGENLYPLVDQLEHENAAKVTGMLLEMDQTEVLHLLESPESLEAKVA 611
Query: 612 EAMAVLQ--EAAARSDVNEKLGSLAVNE 637
EAM VL+ + A S N ++ +L++NE
Sbjct: 612 EAMEVLRTVQQQANSPTN-RMATLSLNE 638
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 164/294 (55%), Gaps = 19/294 (6%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ Y+ +L++ ++ L+D FS ++S +V D S SLGY +V + N + A
Sbjct: 114 SGAGNI--YIKNLDKAIDNKALHDTFSAFGNILSCKVATD-SAGQSLGYGFVQFDNEESA 170
Query: 83 ANAKEALNFMPINGKPIRI----MYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAA 138
NA + LN M +N K + + R+ K+ + NV++KNL + + L F
Sbjct: 171 KNAIDKLNGMLLNDKQVYVGPFLRRQERESGTDKTKFNNVYVKNLSETTTEEDLKKIFGE 230
Query: 139 FGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER- 197
+G + S V D +G+S+ +GFV FEN + A +++ LNG ++K+ YVG ++ ER
Sbjct: 231 YGAITSAVVMRDGDGKSRCFGFVNFENPDDAARSVEALNGKTFDEKEWYVGKAQKKSERE 290
Query: 198 ---------AQQNVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKS 246
+ KF N+YV NL +++TD+ LK++F FGTITS VM+D +G S
Sbjct: 291 VELKGQFEQTLKETVDKFEGLNLYVKNLDDSITDDKLKELFSEFGTITSCKVMRDPNGVS 350
Query: 247 RCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQER 300
+ GFV + + + A+ A+ ++NG K YV AQ++ ER A L+A+F Q R
Sbjct: 351 KGSGFVAYSTAEEASKALTEMNGKMIVSKPLYVALAQRKEERRARLQAQFSQMR 404
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/627 (59%), Positives = 464/627 (74%), Gaps = 29/627 (4%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL ++V ++QL+D+FSQV VVSVRVCRD + R SLGYAYVNY+N DAA A E
Sbjct: 35 TSLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALE 94
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LNF PINGKPIRIMYS+RDPS RKSG GN+FIKNLD SIDNKAL DTF AFG +LSCK+
Sbjct: 95 LLNFTPINGKPIRIMYSNRDPSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFGNILSCKI 154
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A D +G+S+GYGFVQFE +E+AQ+AI LNGMLINDK+V+VG FVR+Q+R + + KF+
Sbjct: 155 ATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRKQDRENVSSNIKFS 214
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NVYV NL++TVTD++LK++FG +GTITSA+VM+DSDGKSRCFGFVNF++ DAAA AV++L
Sbjct: 215 NVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQEL 274
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG NDK YVGRAQK++ERE +L+ KFE+ EK + NLYLKNL+++I+DEKL+
Sbjct: 275 NGKIFNDKELYVGRAQKKSEREMELKEKFEKNVQEVAEKFQNTNLYLKNLEENIDDEKLR 334
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
ELF+E+G ITSCKVM D +G S+GSGF AF E+A RAL EMNGKM+G KPLYVA+AQR
Sbjct: 335 ELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVALAQR 394
Query: 388 KEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAG 446
KE+RKA+LQAQF+Q+R P M+P + +P + G P +G QQL+YGQ P + PQ AG
Sbjct: 395 KEDRKAKLQAQFSQMR-PVAMAPSVGPRMPMFPPGVPGVG-QQLFYGQPPPAFINPQ-AG 451
Query: 447 YGFQQQVFPGLRPGG--PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQ-- 502
+ FQQ + PG+RPGG PN++MP Q Q P QR RR+G MQQP M Q
Sbjct: 452 FAFQQPLMPGMRPGGPMPNFMMPMVQQGQ-QP-QRPAGRRAGG---MQQPMPMGGQQQVF 506
Query: 503 -----GIRYLDNARNGTD---QSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALA 554
G RY R D SV +++P +E+ GM P+ P PVPI L +ALA
Sbjct: 507 PRGGRGYRY-PTGRGMPDPGMHSVGAVMPPSYEMGGM---PMREAAPQPVPIGALATALA 562
Query: 555 SASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAM 614
+A PD + MLGE LYPLVE +E A+KVTGMLLEMDQTEVLHL+ESP+ALK KVAEAM
Sbjct: 563 NAPPDQQRLMLGENLYPLVEQLEREQAAKVTGMLLEMDQTEVLHLLESPDALKAKVAEAM 622
Query: 615 AVLQEAAARSDVN----EKLGSLAVNE 637
VL+ A N ++L +L++N+
Sbjct: 623 EVLRSAQHLQQSNVSTEQQLANLSLND 649
>gi|302142286|emb|CBI19489.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/632 (61%), Positives = 463/632 (73%), Gaps = 35/632 (5%)
Query: 19 AAVPSGYGNV-SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYS 77
A P+G N SLYVGDL+ N+ +SQLYDLF Q QV+SVRVCRD S R SLGY YVNYS
Sbjct: 8 VAGPNGVANTASLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYS 67
Query: 78 NPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFA 137
NPQDAA A + LNF P+NGKPIRIMYSHRDPSIRKSG N+FIKNLD SIDNKAL DTF+
Sbjct: 68 NPQDAARALDLLNFTPLNGKPIRIMYSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFS 127
Query: 138 AFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
AFG +LSCK+A D +GQSKGYGFVQF+NEE+AQNAI LNGMLINDKQVYVG F+R+QER
Sbjct: 128 AFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLNGMLINDKQVYVGQFLRKQER 187
Query: 198 AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
KF NVYV NL+E+ T+EDLK IFG FG ITS +VM+D DGKS+CFGFVNF++
Sbjct: 188 ETALNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFVNFENA 247
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
D AA AVE LNG ++K WYVG+AQK+ ERE +L+ +FEQ +K +G NLY+KNL
Sbjct: 248 DDAAEAVEALNGKKFDEKEWYVGKAQKKYERELELKGRFEQSMKEVVDKFQGVNLYIKNL 307
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
DDSI D+KLKELFSEFGTITSCKVM D G S+GSGF AFS EEA+RAL EMNGKM+
Sbjct: 308 DDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMNGKMVVS 367
Query: 378 KPLYVAVAQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGT 436
KPLYVA+AQRKEER+ARLQAQF+Q+R P M+P +A +P Y GAP LG QQL+YGQG
Sbjct: 368 KPLYVALAQRKEERRARLQAQFSQMR-PVSMAPSVAPRMPMYPPGAPGLG-QQLFYGQGP 425
Query: 437 PGLMPPQAAGYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQ 493
P ++PPQ AG+G+QQQ+ PG+RPGG PN+ +P +Q+ + G R +G Q QQ
Sbjct: 426 PAIIPPQ-AGFGYQQQLVPGMRPGGAPMPNFFVPL-VQQGQQGQRPGGRRGAGPVQQNQQ 483
Query: 494 P------QFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPIS 547
P Q + + RY RN D VP+P G P+PIS
Sbjct: 484 PVPLMQQQMLPRGGRVYRY-PPGRNMPD------VPMPDAAIGQ-----------PMPIS 525
Query: 548 TLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALK 607
L SALA+A+PD + MLGE LYPLV+ +E A+KVTGMLLEMDQTEVLHL+ESPEALK
Sbjct: 526 ALASALANATPDQQRTMLGESLYPLVDQLEHEMAAKVTGMLLEMDQTEVLHLLESPEALK 585
Query: 608 TKVAEAMAVLQEAAAR--SDVNEKLGSLAVNE 637
+KVAEAM VL+ A + + E+L SL++N+
Sbjct: 586 SKVAEAMDVLRNVAQQQANSPTEQLASLSLND 617
>gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/625 (58%), Positives = 466/625 (74%), Gaps = 19/625 (3%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ SLYVGDL+Q+V +SQLYDLF+QV QVVSVRVCRD S SLGY YVNYSN QDA
Sbjct: 37 FTTTSLYVGDLDQSVTDSQLYDLFNQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATR 96
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + LNF P+N K IR+ S RDP+ RKSG GN+FIKNLD SID KAL +TF++FGT++S
Sbjct: 97 AIDVLNFTPLNNKTIRVSVSRRDPTDRKSGAGNIFIKNLDKSIDIKALHETFSSFGTIIS 156
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CK+A D++GQSKGYGFVQ+++EEAAQ AI LNGML+NDKQVYVG+F+R+Q+R +
Sbjct: 157 CKIATDASGQSKGYGFVQYDSEEAAQTAIDKLNGMLMNDKQVYVGVFLRKQDRDSEMSKT 216
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
KF N+YV NL+++ +++DL+K FG +GTITS +VM+D+DGKS+CFGFVNF++P+ AA AV
Sbjct: 217 KFNNIYVKNLSDSTSEDDLRKTFGEYGTITSVVVMRDADGKSKCFGFVNFENPEDAAKAV 276
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
+ LNG +DK WYVG+AQK++ERE +L+++FEQ + +K +G NLY+KNLDD+I+DE
Sbjct: 277 DALNGKKFDDKEWYVGKAQKKSEREVELKSRFEQTVKEQVDKYQGVNLYVKNLDDTIDDE 336
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KLKELFSE+GTITSCKVM D G S+GSGF AFS PEEA+RAL EMNGKMI KPLYVA+
Sbjct: 337 KLKELFSEYGTITSCKVMRDPSGISRGSGFVAFSTPEEASRALGEMNGKMIVSKPLYVAL 396
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQ 443
AQRKEER+ARLQAQF+Q+R P M P + +P Y GAP +G QQL+YGQ P ++ PQ
Sbjct: 397 AQRKEERRARLQAQFSQMR-PVAMPPSMGPRMPMYSPGAPGMG-QQLFYGQAPPAMIAPQ 454
Query: 444 AAGYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNS 500
AG+G+QQQ+ PG+RPGG PN+ MP +Q+ + G R +G Q QQP M
Sbjct: 455 -AGFGYQQQLVPGMRPGGGPMPNFFMP-MVQQGQQGQRPGGRRGAGPAQQTQQPVPMMPQ 512
Query: 501 N---QGIRY-LDNARNGTDQSVV----SMVPVPFEVSGMPATPVETPRPVPVPISTLTSA 552
+G Y RN D ++ M+PVP+ + GM P E P+PI+ L SA
Sbjct: 513 QLMPRGRMYRFPPGRNVGDVTMPGVGGGMLPVPYNMGGM--LPREAAMGQPMPITALASA 570
Query: 553 LASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAE 612
LA+A D + MLGE LYPLV+ +E HA+KVTGMLLEMDQTEVLHL+ESP+ALK KVAE
Sbjct: 571 LANAPADQQRTMLGENLYPLVDQLEHDHAAKVTGMLLEMDQTEVLHLLESPDALKAKVAE 630
Query: 613 AMAVLQEAAARSDVNEKLGSLAVNE 637
AM VL+ ++ +V ++LG L++NE
Sbjct: 631 AMDVLRN-VSQPNVADQLGGLSLNE 654
>gi|224063493|ref|XP_002301171.1| predicted protein [Populus trichocarpa]
gi|222842897|gb|EEE80444.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/629 (60%), Positives = 462/629 (73%), Gaps = 33/629 (5%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL+ NV +SQLYDLF+QV QVVSVRVCRD S R SLGY YVNYSNPQDAA A +
Sbjct: 32 SLYVGDLDFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDV 91
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF P+N KP+RIMYSHRDPSIRKSG N+FIKNLD +ID+KAL DTF++FG +LSCKVA
Sbjct: 92 LNFTPLNNKPLRIMYSHRDPSIRKSGMANIFIKNLDKTIDHKALHDTFSSFGNILSCKVA 151
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
D++GQSKGYGFVQF++EEAAQNAI LNGMLINDKQVYVG F+R+QER + KF N
Sbjct: 152 TDASGQSKGYGFVQFDSEEAAQNAIDKLNGMLINDKQVYVGNFLRKQERDSALSNIKFNN 211
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
+YV NLAE+ TDEDLK IF G ITSA+VM+D+DGKS+CFGFVNF++ D AA AVE LN
Sbjct: 212 IYVKNLAESTTDEDLKSIFEEHGAITSAVVMRDADGKSKCFGFVNFENVDDAAKAVEALN 271
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G +DK WYVG+AQK++ERE +L+ +FEQ + EK + NLY+KNLDDS+NDEKLKE
Sbjct: 272 GKKFDDKEWYVGKAQKKSERELELKGRFEQS-LESVEKYQAVNLYIKNLDDSVNDEKLKE 330
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRK 388
LFS+FGTITSCKVM D G S+GSGF AFS PEEA+RAL E+NGKM+ KPLYVA AQRK
Sbjct: 331 LFSDFGTITSCKVMHDPSGISRGSGFVAFSTPEEASRALAELNGKMVVSKPLYVAPAQRK 390
Query: 389 EERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGY 447
EER+ARLQAQF+Q+R P M+P +A + Y GAP LG QQ YGQG P ++P AG+
Sbjct: 391 EERRARLQAQFSQMR-PVAMAPSVAPRMQMYPPGAPGLG-QQFLYGQGPPAMIP--QAGF 446
Query: 448 GFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQP-----QFMRN 499
G+QQQ+ PG+RPGG PN+ +P Q Q + G R G Q QQP Q M
Sbjct: 447 GYQQQLVPGMRPGGAPMPNFFVPLVQQGQQG-QRPGGRRGGGPVQQTQQPVPLMQQQMLP 505
Query: 500 SNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVET-PRPV-------PVPISTLTS 551
+ RY RN D VP+P GM + P + P+ P+PI+ L +
Sbjct: 506 RGRVYRY-PPGRNMPD------VPMPGVAGGMLSVPYDMGVMPIRDAAGGQPMPITALAT 558
Query: 552 ALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVA 611
ALA+A+P+ + MLGE LYPLV+ +E A+KVTGMLLEMDQTEVLHL+ESPEALK KVA
Sbjct: 559 ALANATPEQQRTMLGEGLYPLVDQLEHDSAAKVTGMLLEMDQTEVLHLLESPEALKAKVA 618
Query: 612 EAMAVLQEAAARSDVN---EKLGSLAVNE 637
EAM VL+ AA+ +N + L SL++NE
Sbjct: 619 EAMEVLRTVAAQQQINNPADHLASLSLNE 647
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 17/190 (8%)
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-SDGKSRCFGFVNFQSPDAAAAAVE 265
T++YV +L VTD L +F G + S V +D S +S +G+VN+ +P AA A++
Sbjct: 31 TSLYVGDLDFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALD 90
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LN T N+K + + R+ +R K AN+++KNLD +I+ +
Sbjct: 91 VLNFTPLNNKPLRI----MYSHRDPSIR------------KSGMANIFIKNLDKTIDHKA 134
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L + FS FG I SCKV D G SKG GF F E A A++++NG +I K +YV
Sbjct: 135 LHDTFSSFGNILSCKVATDASGQSKGYGFVQFDSEEAAQNAIDKLNGMLINDKQVYVGNF 194
Query: 386 QRKEERKARL 395
RK+ER + L
Sbjct: 195 LRKQERDSAL 204
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LY+ +L+ +VN+ +L +LFS + S +V D S S G +V +S P++A+
Sbjct: 309 YQAVNLYIKNLDDSVNDEKLKELFSDFGTITSCKVMHDPSGISR-GSGFVAFSTPEEASR 367
Query: 85 AKEALNFMPINGKPIRIMYSHR 106
A LN + KP+ + + R
Sbjct: 368 ALAELNGKMVVSKPLYVAPAQR 389
>gi|115475838|ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|35215045|dbj|BAC92404.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|35215184|dbj|BAC92537.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|113623484|dbj|BAF23429.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|215694402|dbj|BAG89395.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644698|dbj|BAI39945.1| putative poly(A)-binding protein [Oryza sativa Indica Group]
Length = 660
Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/611 (61%), Positives = 451/611 (73%), Gaps = 30/611 (4%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL+ +V ++QL+D+FSQV VVSVRVCRD + R SLGYAYVN+S+P DAA A E
Sbjct: 39 TSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALE 98
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LNF PINGKPIRIMYS+RDPS RKSG N+FIKNLD SIDNKAL DTF+ FG +LSCKV
Sbjct: 99 MLNFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKV 158
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A + +G+SKGYGFVQFE EEAAQNAI LNGML+NDK+VYVG FVR+QER + +PKF
Sbjct: 159 ATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERENVSGNPKFN 218
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NVYV NL+E+ T+++LK+IFG FG ITS +VM++ DGKSRCFGFVNF++PD AA AVE L
Sbjct: 219 NVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDL 278
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI-NDEKL 326
NG +DK WYV RAQK++ERE +L+ KFE+ +K +G NLYLKNLDDSI +DEKL
Sbjct: 279 NGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEKL 338
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
KE+F++FGTITSCKVM D +G SKGSGF AF E+A+RAL MNGKMIG KPLYVA+AQ
Sbjct: 339 KEIFADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQ 398
Query: 387 RKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAA 445
RKEER+ARLQAQF+Q+R P M P +A +P Y G P +G QQL+YGQ P + PQ
Sbjct: 399 RKEERRARLQAQFSQMR-PMVMPPSVAPRMPMYPPGVPGVG-QQLFYGQPPPAFVNPQ-P 455
Query: 446 GYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFM----- 497
G+GFQQ + PG+RP PN++MP Q Q P QR RR+G T +QQP M
Sbjct: 456 GFGFQQHLIPGMRPSVGPIPNFVMPMVQQGQ-QP-QRPAGRRAG-TGGIQQPMPMGHQQM 512
Query: 498 --RNSNQGIRYL------DNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTL 549
R S G RY DNA G V +VP P+E+ MP + + P VPI L
Sbjct: 513 LPRGSRGGYRYASGRGMPDNAFRG----VGGLVPSPYEMGRMPLS--DAGAPPQVPIGAL 566
Query: 550 TSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTK 609
SALA++ PD + MLGE LYPLV+ +E A+KVTGMLLEMDQTEVLHLIESP+ALK K
Sbjct: 567 ASALANSPPDQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKAK 626
Query: 610 VAEAMAVLQEA 620
VAEAM VL+ A
Sbjct: 627 VAEAMEVLRNA 637
>gi|255555393|ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223542114|gb|EEF43658.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 644
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/631 (60%), Positives = 466/631 (73%), Gaps = 29/631 (4%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDLE NV +S LYDLF+QV QVVSVRVCRD + R SLGY YVNYS+PQDAA
Sbjct: 21 YVTTSLYVGDLEANVTDSHLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSSPQDAAR 80
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + LNF P+NG PIRIMYSHRDPS+RKSG GN+FIKNLD ID+KAL DTF+AFG +LS
Sbjct: 81 ALDMLNFTPLNGSPIRIMYSHRDPSVRKSGSGNIFIKNLDKGIDHKALHDTFSAFGNILS 140
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA DS+GQSKGYGFVQF+NEE+AQ AI+ LNGML+NDKQVYVG F+R+QER
Sbjct: 141 CKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGPFLRKQERESAIDKT 200
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
+F NVYV NL+ET T+EDLKK FG +GTITSA+VM+D DGK++CFGFVNF++ D AA AV
Sbjct: 201 RFNNVYVKNLSETTTEEDLKKAFGEYGTITSAVVMRDGDGKTKCFGFVNFENADDAATAV 260
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
E LNG +DK W+VG+AQK+ ERE +L+ +FEQ +K +GANLY+KNLDDSI D+
Sbjct: 261 EALNGKKFDDKEWFVGKAQKKNERENELKVRFEQSMKEAADKFQGANLYIKNLDDSIGDD 320
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
+LK+LFS FGTITSCKVM D +G S+GSGF AFS PEEA++AL EMNGKM+ KPLYVA+
Sbjct: 321 RLKQLFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASKALMEMNGKMVVSKPLYVAL 380
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQ 443
AQRKE+R+ARLQAQF+QIR P M+P +A +P Y G P LG QQ++YGQ + P
Sbjct: 381 AQRKEDRRARLQAQFSQIR-PVAMAPSVAPRMPMYPPGGPGLG-QQIFYGQAP-PAIIPP 437
Query: 444 AAGYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQP-----Q 495
G+G+QQQ+ PG+RPGG PN+ +P + +Q GQR G RR+G Q QQP Q
Sbjct: 438 QPGFGYQQQLVPGMRPGGAPMPNFFVP--MVQQGQQGQRPGGRRAGAAQQSQQPVPLMQQ 495
Query: 496 FMRNSNQGIRYLDNARNGTDQSVV----SMVPVPFEVSGMPATPVETPRPVPVPISTLTS 551
M + RY R D + M+ VP+++SGMP + P+PI L S
Sbjct: 496 QMVPRGRVYRY-PPGRGIPDVPMTGVAGGMLSVPYDMSGMPMRDAALSQ--PIPIGALAS 552
Query: 552 ALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVA 611
ALA+ASP+ + MLGE LYPLVE +EP A+KVTGMLLEMDQTEVLHL+ESPEALK KVA
Sbjct: 553 ALANASPEQQRTMLGENLYPLVEQLEPDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVA 612
Query: 612 EAMAVL-----QEAAARSDVNEKLGSLAVNE 637
EAM VL Q+A +D +L SL++N+
Sbjct: 613 EAMEVLRSVQQQQAGGAAD---QLASLSLND 640
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/627 (58%), Positives = 459/627 (73%), Gaps = 35/627 (5%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL ++V ++QL+D+FSQV VVSVRVCRD + R SLGYAYVNY+N DAA A E
Sbjct: 35 TSLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALE 94
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LNF PINGKPIRIMYS+RDPS RKSG GN+FIKNLD SIDNKAL DTF AFG +LSCK+
Sbjct: 95 LLNFTPINGKPIRIMYSNRDPSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFGNILSCKI 154
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A D +G+S+GYGFVQFE +E+AQ+AI LNGMLINDK+V+VG FVR+Q+R + + KF+
Sbjct: 155 ATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRKQDRENVSSNIKFS 214
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NVYV NL++TVTD++LK++FG +GTITSA+VM+DSDGKSRCFGFVNF++ DAAA AV++L
Sbjct: 215 NVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQEL 274
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG NDK YVGRAQK++ERE +L+ KFE+ EK + NLYLKNL+++I+DEKL+
Sbjct: 275 NGKIFNDKELYVGRAQKKSEREMELKEKFEKNVQEVAEKFQNTNLYLKNLEENIDDEKLR 334
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
ELF+E+G ITSCKVM D +G S+GSGF AF E+A RAL EMNGKM+G KPLYVA+AQR
Sbjct: 335 ELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVALAQR 394
Query: 388 KEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAG 446
KE+RKA+LQAQF+Q+R P M+P + +P + G P +G QQL+YGQ P + P
Sbjct: 395 KEDRKAKLQAQFSQMR-PVAMAPSVGPRMPMFPPGVPGVG-QQLFYGQPPPAFINP---- 448
Query: 447 YGFQQQVFPGLRPGG--PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQ-- 502
QQ + PG+RPGG PN++MP Q Q P QR RR+G MQQP M Q
Sbjct: 449 ---QQPLMPGMRPGGPMPNFMMPMVQQGQ-QP-QRPAGRRAGG---MQQPMPMGGQQQVF 500
Query: 503 -----GIRYLDNARNGTD---QSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALA 554
G RY R D SV +++P +E+ GM P+ P PVPI L +ALA
Sbjct: 501 PRGGRGYRY-PTGRGMPDPGMHSVGAVMPPSYEMGGM---PMREAAPQPVPIGALATALA 556
Query: 555 SASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAM 614
+A PD + MLGE LYPLVE +E A+KVTGMLLEMDQTEVLHL+ESP+ALK KVAEAM
Sbjct: 557 NAPPDQQRLMLGENLYPLVEQLEREQAAKVTGMLLEMDQTEVLHLLESPDALKAKVAEAM 616
Query: 615 AVLQEAAARSDVN----EKLGSLAVNE 637
VL+ A N ++L +L++N+
Sbjct: 617 EVLRSAQHLQQSNVSTEQQLANLSLND 643
>gi|357154719|ref|XP_003576878.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 653
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/622 (57%), Positives = 453/622 (72%), Gaps = 20/622 (3%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL+ +V ++QL+D+F+Q+ VVSVRVCRD + R SLGYAYVNY+ P DAA A E
Sbjct: 34 TSLYVGDLDMSVQDAQLFDVFAQIGGVVSVRVCRDVTTRKSLGYAYVNYNTPADAARALE 93
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LNF PING+PIRIMYS+RDPS+RKSG N+FIKNLD SIDNKAL DTF FG +LSCKV
Sbjct: 94 MLNFTPINGRPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILSCKV 153
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A D++G+SKGYGFVQ+E +EAA AI+ LNGML+NDK+VYVG F+R+QER + KF
Sbjct: 154 ATDASGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGPFIRKQERDNSPGNVKFN 213
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NV+V NL+ET T++DL++IFG FGTITS +VM++ DG+S+CFGFVNF+SPD AA AV+ L
Sbjct: 214 NVFVKNLSETTTEDDLREIFGKFGTITSVVVMREGDGRSKCFGFVNFESPDEAALAVQDL 273
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG +DK WYVGRAQK++ERE +L+ KFE+ +K + NLYLKNLDD+++DEKL+
Sbjct: 274 NGKKFDDKEWYVGRAQKKSEREMELKEKFEKNLQETADKYQNTNLYLKNLDDTVDDEKLR 333
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
ELF+EFG ITSCKVM D +G S+GSGF AF E+A+RAL EMN KM+G KPLYVA+AQR
Sbjct: 334 ELFAEFGAITSCKVMRDSNGASRGSGFVAFKSAEDASRALAEMNNKMVGSKPLYVALAQR 393
Query: 388 KEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAG 446
KE+RKARLQAQF+Q+R P M+P + + + G P +G QQL+YGQ P + PQ G
Sbjct: 394 KEDRKARLQAQFSQLR-PVPMAPTVGPRMAMFPPGVPGVG-QQLFYGQPPPAFINPQ-PG 450
Query: 447 YGFQQQVFPGLRPGG--PNYIMPYHLQRQVHPGQRTGVRRSGN-----THQMQQPQFMRN 499
+GFQQ + PG+RPG PN++MP Q Q P QR RR+G + M Q Q +
Sbjct: 451 FGFQQPLMPGMRPGAPMPNFMMPMVQQGQ-QP-QRPSGRRAGTGGMQQSMPMGQQQMIAR 508
Query: 500 SNQGIRYLDNARNGTD---QSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASA 556
+G RY R D V +P P+E+ GMP + PVPI L +ALA+A
Sbjct: 509 GGRGYRY-PTGRGMPDPAMHGVGGGMPSPYEIGGMPMRDAGASQ--PVPIGALATALANA 565
Query: 557 SPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAV 616
PD + MLGE LYPLV+ +E A+KVTGMLLEMDQTEVLHL+ESP+ALK KVAEAM V
Sbjct: 566 PPDQQRMMLGENLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLLESPDALKAKVAEAMEV 625
Query: 617 LQEAAARSDVNE-KLGSLAVNE 637
L+ A + E +L SL++N+
Sbjct: 626 LRSAQHTNPSPEQQLASLSLND 647
>gi|356552218|ref|XP_003544466.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 652
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/629 (58%), Positives = 466/629 (74%), Gaps = 20/629 (3%)
Query: 22 PSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQD 81
P+ + SLYVGDLEQNVN++QLYDLF+QV QVVSVRVCRD + R SLGY YVN+SNPQD
Sbjct: 27 PNQFVTTSLYVGDLEQNVNDAQLYDLFNQVVQVVSVRVCRDLTTRRSLGYGYVNFSNPQD 86
Query: 82 AANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGT 141
AA A + LNF P+N +PIRIMYSHRDPS+RKSG N+FIKNLD +ID+KAL DTF++FG
Sbjct: 87 AARALDVLNFTPLNNRPIRIMYSHRDPSLRKSGTANIFIKNLDKAIDHKALHDTFSSFGL 146
Query: 142 VLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQN 201
+LSCK+A D++G SKGYGFVQF++EE+AQNAI LNGMLINDKQVYVG F+R+Q+R
Sbjct: 147 ILSCKIATDASGLSKGYGFVQFDSEESAQNAIDKLNGMLINDKQVYVGHFLRKQDRENAL 206
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
KF NVYV NL+E+ TDE+L K FG +GTITSA++M+D+DGKSRCFGFVNF++PD AA
Sbjct: 207 SKTKFNNVYVKNLSESTTDEELMKFFGEYGTITSAVIMRDADGKSRCFGFVNFENPDDAA 266
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AVE LNG +DK WYVG+AQK++ERE +L+ +FEQ +K +G NLYLKNLDD+I
Sbjct: 267 KAVEGLNGKKVDDKEWYVGKAQKKSEREQELKGRFEQSIKESADKYQGVNLYLKNLDDTI 326
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DEKLKE+F+E+GTITSCKVM D G +GSGF AFS PEEA+RAL EMNGKMI KPLY
Sbjct: 327 SDEKLKEMFAEYGTITSCKVMRDPTGIGRGSGFVAFSTPEEASRALGEMNGKMIAGKPLY 386
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLM 440
VA+AQRKE+R+ARLQAQF+Q+R P ++P +A +P Y GAP LG QQ YGQG P +M
Sbjct: 387 VALAQRKEDRRARLQAQFSQMR-PVAITPSVAPRMPLYPPGAPGLG-QQFLYGQGPPAMM 444
Query: 441 PPQAAGYGFQQQVFPGLRPGG---PNYIMPY----HLQRQVHPGQRTGVRRSGNTHQMQQ 493
PPQ AG+G+QQQ+ PG+RPGG P++ +P ++ + TG +
Sbjct: 445 PPQ-AGFGYQQQLVPGMRPGGGPMPSFFVPMVQQGQQGQRPGGRRGTGPVQQPQQPMPMM 503
Query: 494 PQFMRNSNQGIRYLDNARNGTD---QSVV-SMVPVPFEVSGMPATPVETPRPVPVPISTL 549
Q M + RY RN D Q V M+ VP+++ G+ P+ P+PI L
Sbjct: 504 QQQMLPRGRVYRY-PPGRNMQDVPLQGVAGGMMSVPYDMGGL---PIRDAVGQPMPIQAL 559
Query: 550 TSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTK 609
+ALA+A P+ + MLGE LYPLV+ +E A+KVTGMLLEMDQ EVLHLIESP+ALK K
Sbjct: 560 ATALANAPPEQQRTMLGEALYPLVDQLEHDAAAKVTGMLLEMDQPEVLHLIESPDALKAK 619
Query: 610 VAEAMAVLQEAA-ARSDVNEKLGSLAVNE 637
VAEAM VL+ A +++ ++L SL++N+
Sbjct: 620 VAEAMDVLRNVAQQQTNPADQLASLSLND 648
>gi|115459296|ref|NP_001053248.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|32490269|emb|CAE05558.1| OSJNBb0116K07.11 [Oryza sativa Japonica Group]
gi|113564819|dbj|BAF15162.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|215695125|dbj|BAG90316.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 659
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/622 (59%), Positives = 445/622 (71%), Gaps = 28/622 (4%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDLE +V +SQLY+LFSQ QV+SVRVCRD S R SLGYAYVN++NP DAA A E
Sbjct: 40 SLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALEL 99
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF P+NGKPIR+MYS+RDPS R+SG N+FIKNLD +ID+K L DTF+AFG +LSCKVA
Sbjct: 100 LNFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAFGNILSCKVA 159
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
D GQSKG+GFVQ++ EAAQ+AIK LNGMLINDK VYVG F+R+QER KF N
Sbjct: 160 TDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQERENSVDKTKFNN 219
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V NL+E+ T EDL KIFG +G ITSA++M DGKSRCFGF+NF+SPD AA AVE+LN
Sbjct: 220 VFVKNLSESTTKEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELN 279
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G NDK WYVGRAQK++ERE +L+ +FEQ +K +G NLY+KNLDDSI D++L E
Sbjct: 280 GKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQLCE 339
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRK 388
LFS +G ITSCK+M D +G SKGSGF AFS EEA++AL EMNGKMI KPLYVA AQRK
Sbjct: 340 LFSNYGKITSCKIMRDANGVSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRK 399
Query: 389 EERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGY 447
E+RKA LQAQF+Q+R P M+P +A +P Y AP LG QQL+YGQ P +MPPQ G+
Sbjct: 400 EDRKAMLQAQFSQVR-PVPMTPSMAPRLPMYPPMAP-LG-QQLFYGQAPPAIMPPQ-PGF 455
Query: 448 GFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRS------GNTHQMQQPQFMR 498
GFQQQ+ PG+RPGG PNY +P Q Q P R G+RRS G Q M
Sbjct: 456 GFQQQLVPGMRPGGAHMPNYFVPVVQQGQQGP--RPGIRRSGAGSAQGQQSAQPFQQQML 513
Query: 499 NSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPAT------PVETPRPVPVPISTLTSA 552
+ RY A N D + P+P GM + PV P PI TLTSA
Sbjct: 514 PRGRVYRY-PPAHNMPD-----VPPMPGVAGGMIQSYDMGGFPVRDAGLSPAPIGTLTSA 567
Query: 553 LASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAE 612
LA+A+P+ + +LGE LYPLVE +E HA+KVTGMLLEMDQTEVLHL+ESPEALK+KVAE
Sbjct: 568 LANANPEQQRTILGESLYPLVELLEQNHAAKVTGMLLEMDQTEVLHLLESPEALKSKVAE 627
Query: 613 AMAVLQEAAARSDVNEKLGSLA 634
AM VL+ A + + N LA
Sbjct: 628 AMDVLRNVAQQHNANTPTSQLA 649
>gi|218195166|gb|EEC77593.1| hypothetical protein OsI_16552 [Oryza sativa Indica Group]
Length = 659
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/622 (59%), Positives = 444/622 (71%), Gaps = 28/622 (4%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDLE +V +SQLY+LFSQ QV+SVRVCRD S R SLGYAYVN++NP DAA A E
Sbjct: 40 SLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALEL 99
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF P+NGKPIR+MYS+RDPS R+SG N+FIKNLD +ID+K L DTF+AFG +LSCKVA
Sbjct: 100 LNFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAFGNILSCKVA 159
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
D GQSKG+GFVQ++ EAAQ+AIK LNGMLINDK VYVG F+R+QER KF N
Sbjct: 160 TDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQERENSVDKTKFNN 219
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V NL+E+ T EDL KIFG +G ITSA++M DGKSRCFGF+NF+SPD AA AVE+LN
Sbjct: 220 VFVKNLSESTTKEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELN 279
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G NDK WYVGRAQK++ERE +L+ +FEQ +K +G NLY+KNLDDSI D++L E
Sbjct: 280 GKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQLCE 339
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRK 388
LFS +G ITSCK+M D +G SKGSGF AFS EEA++AL EMNGKMI KPLYVA AQRK
Sbjct: 340 LFSNYGKITSCKIMRDANGVSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRK 399
Query: 389 EERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGY 447
E+RK LQAQF+Q+R P M+P +A +P Y AP LG QQL+YGQ P +MPPQ G+
Sbjct: 400 EDRKVMLQAQFSQVR-PVPMTPSMAPRLPMYPPMAP-LG-QQLFYGQAPPAIMPPQ-PGF 455
Query: 448 GFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRS------GNTHQMQQPQFMR 498
GFQQQ+ PG+RPGG PNY +P Q Q P R G+RRS G Q M
Sbjct: 456 GFQQQLVPGMRPGGAHMPNYFVPVVQQGQQGP--RPGIRRSGAGSAQGQQSAQPFQQQML 513
Query: 499 NSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPAT------PVETPRPVPVPISTLTSA 552
+ RY A N D + P+P GM + PV P PI TLTSA
Sbjct: 514 PRGRVYRY-PPAHNMPD-----VPPMPGVAGGMIQSYDMGGFPVRDAGLSPAPIGTLTSA 567
Query: 553 LASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAE 612
LA+A+P+ + +LGE LYPLVE +E HA+KVTGMLLEMDQTEVLHL+ESPEALK+KVAE
Sbjct: 568 LANANPEQQRTILGESLYPLVELLEQNHAAKVTGMLLEMDQTEVLHLLESPEALKSKVAE 627
Query: 613 AMAVLQEAAARSDVNEKLGSLA 634
AM VL+ A + + N LA
Sbjct: 628 AMDVLRNVAQQHNANTPTSQLA 649
>gi|226496737|ref|NP_001151785.1| LOC100285420 [Zea mays]
gi|195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays]
gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding protein 2 [Zea mays]
Length = 660
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/647 (57%), Positives = 452/647 (69%), Gaps = 26/647 (4%)
Query: 5 GAAAATAAVTSATTAAVPSGYG----NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVC 60
G+ A AV S V G SLYVGDLE +V++SQLY+LFSQ QVVSVRVC
Sbjct: 13 GSPGAVPAVVSPGAVGVGLGVAQPLPTTSLYVGDLEGSVSDSQLYELFSQAGQVVSVRVC 72
Query: 61 RDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFI 120
RD + R SLGYAYVN++NP DAA A E LNF P+N KPIR+MYS+RDPS R+SG N+FI
Sbjct: 73 RDVTSRRSLGYAYVNFNNPLDAARALEVLNFAPLNNKPIRVMYSNRDPSSRRSGSANIFI 132
Query: 121 KNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGML 180
KNLD IDNK+L +TF++FGT+LSCKVA+D GQSKG+GFVQ+E EEAAQNAIK LNGML
Sbjct: 133 KNLDKMIDNKSLHETFSSFGTILSCKVAMDEGGQSKGFGFVQYEKEEAAQNAIKSLNGML 192
Query: 181 INDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMK 240
INDK V+VG F+R+QER KF NV+V NL+E+ T EDL KIFG +G ITSA+VM
Sbjct: 193 INDKPVFVGPFLRKQERDHSFDKTKFNNVFVKNLSESTTKEDLLKIFGEYGNITSAVVMI 252
Query: 241 DSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQER 300
DGKSRCFGF+NF++PDAA+ AV++LNG NDK WYVGRAQK++ERE +L+ +FEQ
Sbjct: 253 GMDGKSRCFGFINFENPDAASRAVQELNGKKINDKEWYVGRAQKKSEREMELKRRFEQIL 312
Query: 301 ISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMP 360
+K +G NLYLKNLDDSI D++L+ELFS FG ITSCKVM DQ+G SKGSGF AFS
Sbjct: 313 KDAADKYQGLNLYLKNLDDSIGDDQLRELFSNFGKITSCKVMRDQNGLSKGSGFVAFSTR 372
Query: 361 EEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYH 419
EEA++AL EMNGKMI KPLYVA AQRKE+RKA LQAQF+Q+R M+P LA +P Y
Sbjct: 373 EEASQALTEMNGKMISGKPLYVAFAQRKEDRKAMLQAQFSQMRPAVPMTPTLAPRLPMY- 431
Query: 420 HGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHP 476
P + PQQL+YGQ P ++PPQ G+GFQQQ+ PG+RPGG PNY +P +Q
Sbjct: 432 ---PPMAPQQLFYGQAPPAMIPPQ-PGFGFQQQLVPGMRPGGPHMPNYFVPVVQHQQGQQ 487
Query: 477 GQRTGVRRSGNTHQMQQPQFMRNS--NQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPAT 534
G R G+RR Q + +G Y R T +++ +P GM
Sbjct: 488 GPRPGIRRGAGAQGQQPVPPFQQQIVPRGRMY----RYPTGRNMPEAPAMPGVAGGMMQA 543
Query: 535 ------PVETPRPVPVP-ISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
PV P I TLTSALA+A+P+ + +LGE LYPLVE +EP A+KVTGM
Sbjct: 544 YDMGGFPVRDAALSPAAQIGTLTSALANANPEQQRTILGENLYPLVEQLEPNQAAKVTGM 603
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
LLEMDQTEVLHL+ESP+ALK+KVAEAM VL A + + N LA
Sbjct: 604 LLEMDQTEVLHLLESPDALKSKVAEAMDVLHNVAHQQNANTPTSQLA 650
>gi|224060514|ref|XP_002300227.1| predicted protein [Populus trichocarpa]
gi|222847485|gb|EEE85032.1| predicted protein [Populus trichocarpa]
Length = 644
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/630 (59%), Positives = 461/630 (73%), Gaps = 28/630 (4%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ SLYVGDLE +V +SQLYDLF+QV QVVSVRVCRD + R SLGY YVNYSNPQDAA
Sbjct: 22 FVTTSLYVGDLEASVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAAR 81
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A E LNF P+NG PIR+MYSHRDP+IRKSG GN+FIKNLD +ID+KAL DTF+AFG +LS
Sbjct: 82 ALEMLNFTPLNGSPIRVMYSHRDPTIRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILS 141
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA D +GQSKGYGFVQF++EEAAQ AI+ LNGML+NDKQVYVG F+R+QER
Sbjct: 142 CKVATDPSGQSKGYGFVQFDSEEAAQKAIEKLNGMLLNDKQVYVGPFLRKQERDTATDKM 201
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
+F NV+V NL+ET T+EDL K FG FGTITS +VM+D DGKS+CFGFVNF++ + AA AV
Sbjct: 202 RFNNVFVKNLSETTTEEDLNKTFGEFGTITSIVVMRDGDGKSKCFGFVNFENAEDAAKAV 261
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
E LNG +DK W+VG+AQK+ ERE +L+ +FEQ +K +GANLY+KNLDDSI DE
Sbjct: 262 EALNGKKIDDKEWFVGKAQKKYEREVELKQRFEQSMKEAADKFQGANLYIKNLDDSIGDE 321
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KLKELFS FGTITSCKVM D +G S+GSGF AFS PEEA+RAL EMNGK++ KPLYVA+
Sbjct: 322 KLKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALLEMNGKIVVSKPLYVAL 381
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQ 443
AQRKE+R+ARLQAQF+Q+R P M+P + +P Y P LG QQ++YGQ + P
Sbjct: 382 AQRKEDRRARLQAQFSQMR-PVAMAPSVGPRMPMYPPAGPGLG-QQIFYGQAP-PAIIPP 438
Query: 444 AAGYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQP-----Q 495
G+G+QQQ+ PG+RPGG PN+ +P + +Q GQR G RR+G Q QQP Q
Sbjct: 439 QPGFGYQQQLVPGMRPGGAPMPNFFVP--MVQQGQQGQRPGGRRAGAGQQSQQPVPLMQQ 496
Query: 496 FMRNSNQGIRYLDNARNGTDQSVV----SMVPVPFEVSGMPATPVETPRPVPVPISTLTS 551
M + RY R D + M+PVP+++ GMP + +PV L +
Sbjct: 497 QMLPRGRVYRY-PPGRGLPDVPMTGVAGGMLPVPYDMGGMPMRDAALSQSIPV--GALAT 553
Query: 552 ALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVA 611
ALA+A+PD + MLGE LYPLVE +EP A+KVTGMLLEMDQTEVLHL+ESPEALK KV
Sbjct: 554 ALANATPDQQRTMLGENLYPLVEQLEPEAAAKVTGMLLEMDQTEVLHLLESPEALKAKVN 613
Query: 612 EAMAVL----QEAAARSDVNEKLGSLAVNE 637
EAM VL Q+A +D +L SL++N+
Sbjct: 614 EAMEVLRTVQQQATGTAD---QLASLSLND 640
>gi|302808075|ref|XP_002985732.1| hypothetical protein SELMODRAFT_122762 [Selaginella moellendorffii]
gi|300146641|gb|EFJ13310.1| hypothetical protein SELMODRAFT_122762 [Selaginella moellendorffii]
Length = 635
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/617 (58%), Positives = 444/617 (71%), Gaps = 39/617 (6%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ + SLYVGDL+ NV E QLYD+F+QVA V+S+RVCRD + SLGYAYVNY+ QDA+
Sbjct: 34 FFSTSLYVGDLDPNVTEGQLYDVFNQVAPVLSIRVCRDLISKRSLGYAYVNYNTGQDASR 93
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A E LNF +NGKPIRIM+SHRDPSIRKSG N+FIKNLD SIDNKAL DTFA FG +LS
Sbjct: 94 ALEMLNFSLVNGKPIRIMFSHRDPSIRKSGMANIFIKNLDKSIDNKALYDTFAQFGNILS 153
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA+DS+GQS+GYGFVQFE E+AAQ+AIK +NGML+ +KQV+VG FVRRQER
Sbjct: 154 CKVAVDSSGQSRGYGFVQFEQEDAAQSAIKQVNGMLLIEKQVFVGPFVRRQERDLTGGIA 213
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
KF NVYV NL + TD+DLK++FG FG I+SA+VM+D +GKS+CFGFVNF++ D AA AV
Sbjct: 214 KFNNVYVKNLGDATTDDDLKRVFGEFGPISSAVVMRDPEGKSKCFGFVNFENADDAALAV 273
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
E+LNG +DK WYVGRAQK++EREA+LRA+++QER R +K +G NLYLKNLDD+I+D+
Sbjct: 274 EELNGKKMDDKEWYVGRAQKKSEREAELRARYDQERKERSDKYQGVNLYLKNLDDTIDDD 333
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KL+ELF FGTI SCKVM D G SKGSGF AFS EEA RA+ EMNG+M+ KP+YVA+
Sbjct: 334 KLRELFHGFGTIISCKVMRDPQGHSKGSGFVAFSTTEEANRAMTEMNGRMVANKPIYVAL 393
Query: 385 AQRKEERKA--RLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMP 441
AQ+++ER+ QAQFA R P G+ P +AS +P +H GA +G Q ++YGQ P P
Sbjct: 394 AQKRDERRRFNAAQAQFAPFRVPVGLGPAVASSVPMFHPGA-GMG-QPVFYGQHPPAF-P 450
Query: 442 PQAAGYGFQQQVFPGLRPGGPNYIMPYH----LQRQVHPGQRTGVRRSGNTHQ------- 490
PQ AG+ +QQQ+ G+RPGGP +P++ +QRQ P QR RR G Q
Sbjct: 451 PQPAGFAYQQQMMSGMRPGGPQ--LPFYSLPIVQRQPQPQQRPNARRGGAPQQQQQQQQQ 508
Query: 491 -------MQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVP 543
M Q R N RY +RN +D M+PVP E S P
Sbjct: 509 QQQPPQLMSQQVCCRGRN--FRYTPTSRNSSDAG--GMLPVPLEASETGILP-------- 556
Query: 544 VPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESP 603
PI+ L SALASASP D+ MLGEQLYPLV+N+E A KVTGMLLEMDQTEVLHLIESP
Sbjct: 557 -PINVLASALASASPTDQRVMLGEQLYPLVDNLEHECAGKVTGMLLEMDQTEVLHLIESP 615
Query: 604 EALKTKVAEAMAVLQEA 620
EALK KVAEAM VL+ A
Sbjct: 616 EALKAKVAEAMDVLRNA 632
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/615 (58%), Positives = 441/615 (71%), Gaps = 14/615 (2%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDLE +V++SQLY+LFSQ QVVSVRVCRD + R SLGYAYVN+SNP DAA A E
Sbjct: 46 TSLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFSNPLDAARALE 105
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LNF +N KPIR+MYS+RDPS R+SG N+FIKNLD +IDNK L +TF++FGT+LSCKV
Sbjct: 106 VLNFAVLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHETFSSFGTILSCKV 165
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A+D GQSKG+GFVQ+E EEAAQNAIK LNGMLINDK V+VG F+R+QER KF
Sbjct: 166 AMDEAGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGPFLRKQERDHSFDKTKFN 225
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NV+V NL+E+ T EDL K+FG +G+ITSA+VM DGKSRCFGF+NF++PDAA+ AV++L
Sbjct: 226 NVFVKNLSESTTKEDLLKVFGEYGSITSAVVMIGMDGKSRCFGFINFENPDAASRAVQEL 285
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG NDK WYVGRAQK++ERE +L+ +FEQ +K +G NLYLKNLDDSI D++L+
Sbjct: 286 NGKKINDKEWYVGRAQKKSEREMELKRRFEQSLKDAADKYQGLNLYLKNLDDSIGDDQLR 345
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
ELFS FG ITS KVM DQ+G SKGSGF AFS EEA++AL EMNGKMI KPLYVA AQR
Sbjct: 346 ELFSNFGKITSYKVMRDQNGLSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQR 405
Query: 388 KEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAG 446
KE+RKA LQAQF+Q+R M+P LA +P Y P + PQQL+YGQ P ++PPQ G
Sbjct: 406 KEDRKAMLQAQFSQMRPAVPMTPTLAPRLPMY----PPMAPQQLFYGQAPPAMIPPQ-PG 460
Query: 447 YGFQQQVFPGLRPGG---PNYIMPYHLQRQ--VHPGQRTGVRRSGNTHQMQQPQFMRNSN 501
+GFQQQ+ PG+RPGG PNY +P Q Q PG R G G Q +
Sbjct: 461 FGFQQQLVPGMRPGGPHMPNYFVPVVQQGQQGPRPGMRRGAGAQGQQPVPPFQQQIVPRG 520
Query: 502 QGIRYLDNARNGTDQSVVSMVPVP-FEVSGMPATPVETPRPVPVP-ISTLTSALASASPD 559
+ RY RN + + V + M PV P I TLTSALA+A+P+
Sbjct: 521 RMYRY-PTGRNMPEAPAMPGVAGGMIQAYDMGGFPVRDAAVSPAAQIGTLTSALANANPE 579
Query: 560 DRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
+ +LGE LYPLVE +EP A+KVTGMLLEMDQTEVLHL+ESP+ALK+KVAEAM VL+
Sbjct: 580 QQRTILGENLYPLVEQLEPNQAAKVTGMLLEMDQTEVLHLLESPDALKSKVAEAMDVLRN 639
Query: 620 AAARSDVNEKLGSLA 634
A + + N LA
Sbjct: 640 VAHQQNPNTPTNQLA 654
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/626 (59%), Positives = 443/626 (70%), Gaps = 30/626 (4%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDLE NV +SQLY+LFSQ QVVSVRVCRD + R SLGYAYVNYSNP DAA A E
Sbjct: 122 TSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAME 181
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
ALNF P+N KPIR+MYS+RDPS R+SG N+FIKNLD +IDNK L DTF+AFG +LSCKV
Sbjct: 182 ALNFAPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKV 241
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A+D GQSKG+GFVQ+E EE+AQ+A+K LNGMLINDK VYVG F+R+QER + KF
Sbjct: 242 AMDDIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYVGPFLRKQERDNSSDKAKFN 301
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NV+V NL+E+ T EDL K+F +GTITSA+VM DGKSRCFGFVNF+SPD AA AVE+L
Sbjct: 302 NVFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKSRCFGFVNFESPDDAARAVEEL 361
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG NDK WYVGRAQK++ERE DL+ +FEQ +K +G NLYLKNLDD I D++L+
Sbjct: 362 NGKKINDKEWYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGITDDQLR 421
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
ELFS FG ITSCK+M DQ+G SKGSGF +FS EEA++AL EMNGKMI KPLYVA AQR
Sbjct: 422 ELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMNGKMISGKPLYVAFAQR 481
Query: 388 KEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAG 446
KEERKA LQAQF+Q+R P M+P + +P Y P LG QQL+YGQ M P G
Sbjct: 482 KEERKAMLQAQFSQMR-PVPMTPSMTPRLPMYPP-MPTLG-QQLFYGQAP-PAMMPPQPG 537
Query: 447 YGFQQQVFPGLRPGG----PNYIMPYHLQRQVHPGQ---RTGVRRSG------NTHQMQQ 493
YGFQQQ+ PG+RPGG PNY +P V PGQ R G+RRSG
Sbjct: 538 YGFQQQLVPGMRPGGGAHMPNYFVPV-----VQPGQQGPRPGMRRSGPGSAQGQQTPQPF 592
Query: 494 PQFMRNSNQGIRYLDNARNGTDQSVVSMVPV-----PFEVSGMPATPVETPRPVPVPIST 548
Q M + RY R+ + + V V P+++ P P P PI T
Sbjct: 593 QQQMVPRGRVYRYPPGPRHMAEVQQMPGVGVGGMVQPYDMGSFPVRDAGV-SPAP-PIGT 650
Query: 549 LTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
LTSALA+A+P+ + +LGE LYPLVE +E A+KVTGMLLEMDQTEVLHL+ESPEALK+
Sbjct: 651 LTSALANATPEQQRTILGESLYPLVEKLEHQQAAKVTGMLLEMDQTEVLHLLESPEALKS 710
Query: 609 KVAEAMAVLQEAAARSDVNEKLGSLA 634
KVAEAM VL+ A + + N LA
Sbjct: 711 KVAEAMDVLRNVAQQQNPNAPTSQLA 736
>gi|302785327|ref|XP_002974435.1| hypothetical protein SELMODRAFT_101161 [Selaginella moellendorffii]
gi|300158033|gb|EFJ24657.1| hypothetical protein SELMODRAFT_101161 [Selaginella moellendorffii]
Length = 642
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/624 (58%), Positives = 444/624 (71%), Gaps = 46/624 (7%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ + SLYVGDL+ NV E QLYD+F+QVA V+S+RVCRD + SLGYAYVNY+ QDA+
Sbjct: 34 FFSTSLYVGDLDPNVTEGQLYDVFNQVAPVLSIRVCRDLISKRSLGYAYVNYNTGQDASR 93
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A E LNF +NGKPIRIM+SHRDPSIRKSG N+FIKNLD SIDNKAL DTFA FG +LS
Sbjct: 94 ALEMLNFSLVNGKPIRIMFSHRDPSIRKSGMANIFIKNLDKSIDNKALYDTFAQFGNILS 153
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA+DS+GQS+GYGFVQFE E+AAQ+AIK +NGML+ +KQV+VG FVRRQER
Sbjct: 154 CKVAVDSSGQSRGYGFVQFEQEDAAQSAIKQVNGMLLIEKQVFVGPFVRRQERDLTGGVT 213
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
KF NVYV NL + TD+DLK++FG FG I+SA+VM+D +GKS+CFGFVNF++ D AA AV
Sbjct: 214 KFNNVYVKNLGDATTDDDLKRVFGEFGPISSAVVMRDPEGKSKCFGFVNFENADDAALAV 273
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
E+LNG +DK WYVGRAQK++EREA+LRA+++QER R +K +G NLYLKNLDD+I+D+
Sbjct: 274 EELNGKKMDDKEWYVGRAQKKSEREAELRARYDQERKERSDKYQGVNLYLKNLDDTIDDD 333
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KL+ELF FGTI SCKVM D G SKGSGF AFS EEA RA+ EMNG+M+ KP+YVA+
Sbjct: 334 KLRELFHGFGTIISCKVMRDPQGHSKGSGFVAFSTTEEANRAMTEMNGRMVANKPIYVAL 393
Query: 385 AQRKEERKA--RLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMP 441
AQ+++ER+ QAQFA R P G+ P +AS +P +H GA +G Q ++YGQ P P
Sbjct: 394 AQKRDERRRFNAAQAQFAPFRVPVGLGPAVASSVPMFHPGA-GMG-QPVFYGQHPPAF-P 450
Query: 442 PQAAGYGFQQQVFPGLRPGGPNYIMPYH----LQRQVHPGQRTGVRRSGNTHQ------- 490
PQ AG+ +QQQ+ G+RPGGP +P++ +QRQ P QR RR G Q
Sbjct: 451 PQPAGFAYQQQMMSGMRPGGPQ--LPFYSLPIVQRQPQPQQRPNARRGGAPQQQQQQQQQ 508
Query: 491 --------------MQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPV 536
M Q R N RY +RN +D M+PVP E S P
Sbjct: 509 QQQQQQQQQQPPQLMSQQVCCRGRN--FRYTPTSRNSSDAG--GMLPVPLEASETGILP- 563
Query: 537 ETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEV 596
PI+ L SALASASP D+ MLGEQLYPLV+N+E A KVTGMLLEMDQTEV
Sbjct: 564 --------PINVLASALASASPTDQRVMLGEQLYPLVDNLEHECAGKVTGMLLEMDQTEV 615
Query: 597 LHLIESPEALKTKVAEAMAVLQEA 620
LHLIESPEALK KVAEAM VL+ A
Sbjct: 616 LHLIESPEALKAKVAEAMDVLRNA 639
>gi|115477976|ref|NP_001062583.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|46389987|dbj|BAD16229.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|113630816|dbj|BAF24497.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|125562753|gb|EAZ08133.1| hypothetical protein OsI_30396 [Oryza sativa Indica Group]
gi|125604734|gb|EAZ43770.1| hypothetical protein OsJ_28392 [Oryza sativa Japonica Group]
gi|169244485|gb|ACA50516.1| poly(A)-binding protein [Oryza sativa Japonica Group]
gi|215695451|dbj|BAG90618.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 662
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/626 (57%), Positives = 454/626 (72%), Gaps = 24/626 (3%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL+ +V ++QL+D+F+QV VVSVRVCRD + R SLGYAYVNYS+P DAA A E
Sbjct: 40 TSLYVGDLDVSVQDAQLFDVFAQVGGVVSVRVCRDVNTRRSLGYAYVNYSSPADAARALE 99
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LNF PINGKPIRIMYS+RDPS+RKSG N+FIKNLD SIDNKAL DTF FG +LSCKV
Sbjct: 100 MLNFTPINGKPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILSCKV 159
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A D++G+SKGYGFVQ+E +EAAQ AI LNGML+NDK+VYVG F+R+QER KF
Sbjct: 160 ATDASGESKGYGFVQYERDEAAQAAIDKLNGMLMNDKKVYVGPFIRKQERDNSPGQVKFN 219
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NVYV NL+E T++DLK+IFG FGTITSA+VM++ DG+S+CFGFVNF+SPD AA AV++L
Sbjct: 220 NVYVKNLSENTTEDDLKEIFGKFGTITSAVVMREGDGRSKCFGFVNFESPDDAAQAVQEL 279
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG +DK WYVGRAQK++ERE +L+ KFE+ +K + NLYLKNLDDS++D+KL+
Sbjct: 280 NGKKFDDKEWYVGRAQKKSEREMELKEKFEKNLQEAADKYQNTNLYLKNLDDSVDDDKLR 339
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
ELF+E+GTITSCKVM D +G S+GSGF AF E+A+RAL EMN KM+G KPLYVA+AQR
Sbjct: 340 ELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEMNSKMVGSKPLYVALAQR 399
Query: 388 KEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAG 446
KE+RKARLQAQF+Q+R P ++P + +P + G P +G QQL+YGQ P + Q G
Sbjct: 400 KEDRKARLQAQFSQLR-PVPLAPSVGPRMPMFPPGVPGVG-QQLFYGQPPPAFINTQ-PG 456
Query: 447 YGFQQQVFPGLRPGG---PNYIMPY---HLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNS 500
+GFQQ + PG+RPG PN+IMP Q Q G+R G M Q Q M
Sbjct: 457 FGFQQPLMPGMRPGAGPMPNFIMPMVQQGQQPQRPAGRRAGAGGMQQPMPMGQQQMMARG 516
Query: 501 NQGIRY------LDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALA 554
+G RY D A +G V +P P+E+ GMP + PVPI L +ALA
Sbjct: 517 GRGYRYPTGRGMPDPAMHGVGGGV---MPSPYEMGGMPMRDAAASQ--PVPIGALATALA 571
Query: 555 SASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAM 614
+A+PD + MLGE LYPLV+ +E A+KVTGMLLEMDQTEVLHL+ESPEALK KVAEAM
Sbjct: 572 NAAPDQQRMMLGENLYPLVDQLEHEQAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAM 631
Query: 615 AVL---QEAAARSDVNEKLGSLAVNE 637
VL Q+ + ++L SL++N+
Sbjct: 632 EVLRTAQQIQTNATPEQQLASLSLND 657
>gi|326526505|dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/605 (59%), Positives = 440/605 (72%), Gaps = 21/605 (3%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL+ +V ++QL+D+FSQV VVSVRVCRD + R SLGYAYVN+S+P DAA A E
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEM 102
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF P+NGKPIRIMYS+RDPS RKSG N+FIKNLD SIDNKAL DTF+AFG +LSCKVA
Sbjct: 103 LNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVA 162
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
+ +G+SKGYGFVQ+E +E+AQNAI LNGML+NDK+VYVG FVR+QER SPKF N
Sbjct: 163 TEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNN 222
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
VYV NL+E+ T+++LK++FG+FG ITS IV++ DGKSRCFGFVNF++PD A AVE LN
Sbjct: 223 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLN 282
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI-NDEKLK 327
G +DK YVGRAQK++ERE L+ FE+ ++ +G NLYLKNLD S+ +DEKLK
Sbjct: 283 GKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLK 342
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
ELF+EFGTITSCKVM D +G +KGSGF AF E+ATRAL MNGKM+G KPLYVA+AQR
Sbjct: 343 ELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQR 402
Query: 388 KEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGY 447
KEER+ARLQAQF+Q+R P P+A +P Y G P +G QQL+YGQ P + PQ GY
Sbjct: 403 KEERRARLQAQFSQMR-PVMPPPVAPRMPMYPPGVPGMG-QQLFYGQPPPAFVNPQ-PGY 459
Query: 448 GFQQQVFPGLRPG---GPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFM------- 497
GFQQ + PG+RPG PN++MP Q Q P QR RR+G MQQP M
Sbjct: 460 GFQQHMIPGMRPGVAPMPNFVMPMVQQGQ-QP-QRPSGRRAG-AGGMQQPMPMGHQQMVP 516
Query: 498 RNSNQGIRYLD--NARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALAS 555
R G RY + V M P +E+ M TP +T P V L SALA+
Sbjct: 517 RGGRGGYRYASGRGMPEAAFRGVGGMAPSLYEMGRM--TPGDTGAPQQVSSGALASALAN 574
Query: 556 ASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMA 615
+ P+ + MLGE LYPLV+ +E A+KVTGMLLEMDQTEVLHLIESP+ALK+KVAEAM
Sbjct: 575 SPPEQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAME 634
Query: 616 VLQEA 620
VL+ A
Sbjct: 635 VLRSA 639
>gi|326492626|dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511122|dbj|BAJ87575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/604 (59%), Positives = 439/604 (72%), Gaps = 21/604 (3%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
LYVGDL+ +V ++QL+D+FSQV VVSVRVCRD + R SLGYAYVN+S+P DAA A E L
Sbjct: 44 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 103
Query: 90 NFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAI 149
NF P+NGKPIRIMYS+RDPS RKSG N+FIKNLD SIDNKAL DTF+AFG +LSCKVA
Sbjct: 104 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 163
Query: 150 DSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNV 209
+ +G+SKGYGFVQ+E +E+AQNAI LNGML+NDK+VYVG FVR+QER SPKF NV
Sbjct: 164 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNV 223
Query: 210 YVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNG 269
YV NL+E+ T+++LK++FG+FG ITS IV++ DGKSRCFGFVNF++PD A AVE LNG
Sbjct: 224 YVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNG 283
Query: 270 TTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI-NDEKLKE 328
+DK YVGRAQK++ERE L+ FE+ ++ +G NLYLKNLD S+ +DEKLKE
Sbjct: 284 KKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKE 343
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRK 388
LF+EFGTITSCKVM D +G +KGSGF AF E+ATRAL MNGKM+G KPLYVA+AQRK
Sbjct: 344 LFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRK 403
Query: 389 EERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYG 448
EER+ARLQAQF+Q+R P P+A +P Y G P +G QQL+YGQ P + PQ GYG
Sbjct: 404 EERRARLQAQFSQMR-PVMPPPVAPRMPMYPPGVPGMG-QQLFYGQPPPAFVNPQ-PGYG 460
Query: 449 FQQQVFPGLRPG---GPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFM-------R 498
FQQ + PG+RPG PN++MP Q Q P QR RR+G MQQP M R
Sbjct: 461 FQQHMIPGMRPGVAPMPNFVMPMVQQGQ-QP-QRPSGRRAG-AGGMQQPMPMGHQQMVPR 517
Query: 499 NSNQGIRYLD--NARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASA 556
G RY + V M P +E+ M TP +T P V L SALA++
Sbjct: 518 GGRGGYRYASGRGMPEAAFRGVGGMAPSLYEMGRM--TPGDTGAPQQVSSGALASALANS 575
Query: 557 SPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAV 616
P+ + MLGE LYPLV+ +E A+KVTGMLLEMDQTEVLHLIESP+ALK+KVAEAM V
Sbjct: 576 PPEQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEV 635
Query: 617 LQEA 620
L+ A
Sbjct: 636 LRSA 639
>gi|240256156|ref|NP_195137.5| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
gi|1171978|sp|P42731.1|PABP2_ARATH RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2
gi|304109|gb|AAA61780.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|2911051|emb|CAA17561.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|7270360|emb|CAB80128.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|26983870|gb|AAN86187.1| putative polyadenylate-binding protein 2 (PABP2) [Arabidopsis
thaliana]
gi|332660925|gb|AEE86325.1| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
Length = 629
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/635 (56%), Positives = 453/635 (71%), Gaps = 30/635 (4%)
Query: 8 AATAAVTSA---TTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQS 64
+TAAVTSA + A + +GN SLYVGDL+ NV +SQL+D F Q+ VV+VRVCRD
Sbjct: 13 GSTAAVTSAPATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLV 72
Query: 65 KRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLD 124
R SLGY YVN++NPQDAA A + LN++P+ GKPIR+MYSHRDPS+R+SG GN+FIKNLD
Sbjct: 73 TRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLD 132
Query: 125 TSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDK 184
SID+KAL DTF++FG ++SCKVA+DS+GQSKGYGFVQ+ NEE+AQ AI+ LNGML+NDK
Sbjct: 133 ESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDK 192
Query: 185 QVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG 244
QVYVG F+RRQER KFTNVYV NLAE+ TD+DLK FG +G ITSA+VMKD +G
Sbjct: 193 QVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEG 252
Query: 245 KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRY 304
KS+ FGFVNF++ D AA AVE LNG +DK WYVGRAQK++ERE +LR ++EQ
Sbjct: 253 KSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAA 312
Query: 305 EKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEAT 364
+K + +NLY+KNLD SI+DEKLKE+FS FGT+TS KVM D +G SKGSGF AF+ PEEAT
Sbjct: 313 DKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEAT 372
Query: 365 RALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAP 423
A+++++GKMI KPLYVA+AQRKE+R+ RLQAQF+Q+R P M P + +P Y G P
Sbjct: 373 EAMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQFSQVR-PVAMQPSVGPRMPVYPPGGP 431
Query: 424 RLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRT 480
+G QQ++YGQ P ++PPQ GYG+QQQ+ PG+RPGG P++ MP +Q PG
Sbjct: 432 GIG-QQMFYGQAPPAMIPPQ-PGYGYQQQLVPGMRPGGGPVPSFFMPMVQPQQQRPGGGR 489
Query: 481 GVRRSGNTHQMQQPQFMRNSNQG--IRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVET 538
++ Q + +G RY R G+ VP P +
Sbjct: 490 RPGGIQHSQQQNPMMQQQMHPRGRMFRY-PQGRGGSGD-----VP-----------PYDM 532
Query: 539 PRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLH 598
+P+ I L S L++A+P+ + MLGE LYPLVE +E A+KVTGMLLEMDQTEVLH
Sbjct: 533 GNNMPLTIGALASNLSNATPEQQRTMLGEVLYPLVEQVEAESAAKVTGMLLEMDQTEVLH 592
Query: 599 LIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSL 633
L+ESPEALK KVAEAM VL+ AA E+L SL
Sbjct: 593 LLESPEALKAKVAEAMDVLRSVAA-GGATEQLASL 626
>gi|225428865|ref|XP_002285190.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147839912|emb|CAN65906.1| hypothetical protein VITISV_004873 [Vitis vinifera]
Length = 648
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/608 (58%), Positives = 435/608 (71%), Gaps = 21/608 (3%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ SLYVGDLE NVN+SQLYDLFSQ+ VVSVRVCRD S R SLGY YVNYSNPQDAA
Sbjct: 27 FVTTSLYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDAAR 86
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + LNF P+NGKPIRIMYSHRDPSIRKSG GN+FIKNLD ID+KAL DTF+AFG +LS
Sbjct: 87 ALDVLNFTPLNGKPIRIMYSHRDPSIRKSGTGNIFIKNLDKGIDHKALHDTFSAFGNILS 146
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA D++G SKG+GFVQF++EEAAQ AI LNGML+NDKQV+VG FVR+QER
Sbjct: 147 CKVATDASGMSKGHGFVQFDSEEAAQKAIDKLNGMLLNDKQVFVGPFVRKQERESTINKE 206
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
KF NV+V N++E +T+EDL +IFG FG ITS +VM+D DGKS+CFGFVNF++ D AA +V
Sbjct: 207 KFNNVFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDGDGKSKCFGFVNFENVDDAAMSV 266
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
E LNG +DK WYVG+AQK++ERE +L+++FEQ +K +GANLY+KNLDDSI D+
Sbjct: 267 EALNGQKFDDKEWYVGKAQKKSEREIELKSRFEQNMKEAVDKFQGANLYIKNLDDSIGDD 326
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KLKELF++FGTITSCKVM D +G S+GSGF AFS PEEA+RAL EMN KM+ KPLYVA+
Sbjct: 327 KLKELFAQFGTITSCKVMRDPNGLSRGSGFVAFSSPEEASRALAEMNSKMVVSKPLYVAL 386
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQA 444
AQRKE+R+ARLQAQF+Q+R + +P Y P LG QQ++YGQ + P
Sbjct: 387 AQRKEDRRARLQAQFSQMRPVPMPPSVVPRLPMYPPSGPGLG-QQMFYGQAP-PAIIPPQ 444
Query: 445 AGYGFQQQVFPGLRPGG---PNYIMPYHLQRQVH-----------PGQRTGVRRSGNTHQ 490
G+G+QQQ+ PG+RP G PN+ +P Q Q P Q+T + Q
Sbjct: 445 PGFGYQQQLVPGMRPAGPPMPNFFVPIVQQGQQGQRPGGRRAGAVPMQQTQQQVPLMQQQ 504
Query: 491 MQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLT 550
M + G D G +VS VP+++ GMP + +PV L
Sbjct: 505 MLPRGRVFRYPPGRGLSDVPMPGVAGGMVS---VPYDMGGMPLHDAAISQSIPV--GALA 559
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
+ALA+A P ++ MLGE LYPLVE +EP A+KVTGMLLEMDQTEVLHL+ESP+ALK KV
Sbjct: 560 TALANAPPAEQRTMLGENLYPLVEQLEPEMAAKVTGMLLEMDQTEVLHLLESPDALKAKV 619
Query: 611 AEAMAVLQ 618
AEAM VL+
Sbjct: 620 AEAMEVLR 627
>gi|357437769|ref|XP_003589160.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355478208|gb|AES59411.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 647
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/642 (56%), Positives = 460/642 (71%), Gaps = 19/642 (2%)
Query: 8 AATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRS 67
A A ++ V + + SLYVGDLE NVN+SQLYDLF+QV QVVSVRVCRD + R
Sbjct: 12 APVPAPSNGVVPNVANQFVTTSLYVGDLEVNVNDSQLYDLFNQVGQVVSVRVCRDLATRR 71
Query: 68 SLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSI 127
SLGY YVN++NPQDAA A + LNF P+N K IR+MYSHRDPS RKSG N+FIKNLD +I
Sbjct: 72 SLGYGYVNFTNPQDAARALDVLNFTPMNNKSIRVMYSHRDPSSRKSGTANIFIKNLDKTI 131
Query: 128 DNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVY 187
D+KAL DTF++FG ++SCK+A D +GQSKGYGFVQFE E++AQNAI LNGMLINDKQV+
Sbjct: 132 DHKALHDTFSSFGQIMSCKIATDGSGQSKGYGFVQFEAEDSAQNAIDKLNGMLINDKQVF 191
Query: 188 VGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSR 247
VG F+R+Q+R KF NVYV NL+E+ T++DLK FG +GTITSA++M+D+DG+S+
Sbjct: 192 VGHFLRKQDRDNVLSKTKFNNVYVKNLSESFTEDDLKNEFGAYGTITSAVLMRDADGRSK 251
Query: 248 CFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQE-RISRYEK 306
CFGFVNF++ + AA AVE LNG +DK WYVG+AQK++ERE +L+ +FEQ + S +K
Sbjct: 252 CFGFVNFENAEDAAKAVEALNGKKVDDKEWYVGKAQKKSEREQELKGRFEQTVKESVVDK 311
Query: 307 LKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRA 366
+G NLYLKNLDDSI DEKLKE+FSEFGTITS K+M D +G S+GSGF AFS PEEA+RA
Sbjct: 312 FQGLNLYLKNLDDSITDEKLKEMFSEFGTITSYKIMRDPNGVSRGSGFVAFSTPEEASRA 371
Query: 367 LNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRL 425
L EMNGKMI KPLYVAVAQRKE+R+ARLQAQF+Q+R P ++P +A +P Y G P L
Sbjct: 372 LGEMNGKMIVSKPLYVAVAQRKEDRRARLQAQFSQMR-PVAITPSVAPRMPLYPPGTPGL 430
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGV 482
G QQ YGQG P +MPPQ AG+G+QQQ+ PG+RPGG P+Y +P Q Q
Sbjct: 431 G-QQFMYGQGPPAMMPPQ-AGFGYQQQLVPGMRPGGGPMPSYFVPMVQQGQQGQRPGGRR 488
Query: 483 RRSGNTHQMQQPQFMRNS---NQGIRYLDNARNGTDQSV--VSMVPVPFEVSGMPATPVE 537
G Q P + + RY N D V + + +++ G+P V
Sbjct: 489 GGPGQQPPQQVPMMQQQMLPRQRVYRYPPGRSNIQDAPVQNIGGGMMSYDMGGLPLRDV- 547
Query: 538 TPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVL 597
P P+PI L +ALA+A P+ + MLGE LYPLV+ +E A+KVTGMLLEMDQ EVL
Sbjct: 548 VP---PMPIHALATALANAPPEQQRTMLGEALYPLVDQLEHDSAAKVTGMLLEMDQPEVL 604
Query: 598 HLIESPEALKTKVAEAMAVLQEAAAR--SDVNEKLGSLAVNE 637
HLIESP+ALK KVAEAM VL+ + + + ++L SL++N+
Sbjct: 605 HLIESPDALKAKVAEAMEVLRNVSQQQGNSPADQLASLSLND 646
>gi|70663933|emb|CAE02947.3| OSJNBa0014K14.19 [Oryza sativa Japonica Group]
Length = 657
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/623 (59%), Positives = 441/623 (70%), Gaps = 32/623 (5%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDLE +V +SQLY+LFSQ QV+SVRVCRD S R SLGYAYVN++NP DAA A E
Sbjct: 40 SLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALEL 99
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF P+NGKPIR+MYS+RDPS R+SG N+FIKNLD +ID+K L DTF+AFG +LSCKVA
Sbjct: 100 LNFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAFGNILSCKVA 159
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
D GQSKG+GFVQ++ EAAQ+AIK LNGMLINDK VYVG F+R+QER KF N
Sbjct: 160 TDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQERENSVDKTKFNN 219
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V NL+E+ T EDL KIFG +G ITSA++M DGKSRCFGF+NF+SPD AA AVE+LN
Sbjct: 220 VFVKNLSESTTKEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELN 279
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G NDK WYVGRAQK++ERE +L+ +FEQ +K +G NLY+KNLDDSI D++L E
Sbjct: 280 GKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQLCE 339
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFS-MPEEATRALNEMNGKMIGRKPLYVAVAQR 387
LFS +G ITSCK+M D +G SKGSGF AFS +P L EMNGKMI KPLYVA AQR
Sbjct: 340 LFSNYGKITSCKIMRDANGVSKGSGFVAFSTLP---FIQLTEMNGKMISGKPLYVAFAQR 396
Query: 388 KEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAG 446
KE+RKA LQAQF+Q+R P M+P +A +P Y AP LG QQL+YGQ P +MPPQ G
Sbjct: 397 KEDRKAMLQAQFSQVR-PVPMTPSMAPRLPMYPPMAP-LG-QQLFYGQAPPAIMPPQ-PG 452
Query: 447 YGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRS------GNTHQMQQPQFM 497
+GFQQQ+ PG+RPGG PNY +P Q Q P R G+RRS G Q M
Sbjct: 453 FGFQQQLVPGMRPGGAHMPNYFVPVVQQGQQGP--RPGIRRSGAGSAQGQQSAQPFQQQM 510
Query: 498 RNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPAT------PVETPRPVPVPISTLTS 551
+ RY A N D + P+P GM + PV P PI TLTS
Sbjct: 511 LPRGRVYRY-PPAHNMPD-----VPPMPGVAGGMIQSYDMGGFPVRDAGLSPAPIGTLTS 564
Query: 552 ALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVA 611
ALA+A+P+ + +LGE LYPLVE +E HA+KVTGMLLEMDQTEVLHL+ESPEALK+KVA
Sbjct: 565 ALANANPEQQRTILGESLYPLVELLEQNHAAKVTGMLLEMDQTEVLHLLESPEALKSKVA 624
Query: 612 EAMAVLQEAAARSDVNEKLGSLA 634
EAM VL+ A + + N LA
Sbjct: 625 EAMDVLRNVAQQHNANTPTSQLA 647
>gi|357145576|ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 663
Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/625 (58%), Positives = 453/625 (72%), Gaps = 23/625 (3%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL+ +V ++QL+D+FSQV VVSVRVCRD + R SLGYAYVN+S+P DAA A E
Sbjct: 42 TSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAME 101
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LNF P+NGKPIRIMYS+RDPS RKSG N+FIKNLD SIDNKAL DTF+AFGT+LSCKV
Sbjct: 102 MLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALFDTFSAFGTILSCKV 161
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A + +G+SKGYGFVQ+E +E+AQNAI LNGML+NDK+VYVG FVR+QER SPKF
Sbjct: 162 ATEISGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFN 221
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NVYV NL+E+ T+++LK++FG FG ITS IV++ DGKSRCFGFVNF++PD AA AVE L
Sbjct: 222 NVYVKNLSESTTEDNLKEMFGKFGPITSVIVVRADDGKSRCFGFVNFENPDDAARAVEDL 281
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI-NDEKL 326
NG +DK YVGRAQK++ERE L+ KFE+ +K +G NLYLKNLD S+ +DEKL
Sbjct: 282 NGKKLDDKELYVGRAQKKSEREMQLKEKFEKSNKETADKNQGTNLYLKNLDGSVDDDEKL 341
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
KELF+EFGTITSCKVM D +G +KGSGF AF E+A+RAL MNGKM+G KPLYVA+AQ
Sbjct: 342 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDASRALVAMNGKMVGSKPLYVALAQ 401
Query: 387 RKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAG 446
RKEER+ARLQAQF+Q+R P+A +P Y G P +G QQ++YGQ G
Sbjct: 402 RKEERRARLQAQFSQMRPVVMPPPVAPRMPMYPPGVPGMG-QQMFYGQPP-PPFVNPQPG 459
Query: 447 YGFQQQVFPGLRPG---GPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFM------ 497
+GFQQ + PG+RPG PN++MP Q Q P QR RR+G MQQP M
Sbjct: 460 FGFQQHMIPGMRPGVAPMPNFVMPMVQQGQ-QP-QRPSGRRAG-AGGMQQPMPMGHQQML 516
Query: 498 -RNSNQGIRYLDNARNGTD---QSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSAL 553
R G RY + R D + V MVP P+E+ M T + P VP TL SAL
Sbjct: 517 PRGGRGGYRYA-SGRGMPDSPFRGVGGMVPSPYEMGRM--TLNDNGAPQQVPSGTLASAL 573
Query: 554 ASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEA 613
A++ P+ + MLGE LYPLV+ +E A+KVTGMLLEMDQTEVLHLIESP+ALK+KVAEA
Sbjct: 574 ANSPPEQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEA 633
Query: 614 MAVLQEAAARSDV-NEKLGSLAVNE 637
M VL+ A ++ ++L +L++++
Sbjct: 634 MDVLRSAQQQTSAPADQLAALSLSD 658
>gi|19347816|gb|AAL86321.1| putative poly(A)-binding protein [Arabidopsis thaliana]
Length = 613
Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/631 (56%), Positives = 450/631 (71%), Gaps = 30/631 (4%)
Query: 12 AVTSA---TTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSS 68
AVTSA + A + +GN SLYVGDL+ NV +SQL+D F Q+ VV+VRVCRD R S
Sbjct: 1 AVTSAPATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRS 60
Query: 69 LGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSID 128
LGY YVN++NPQDAA A + LN++P+ GKPIR+MYSHRDPS+R+SG GN+FIKNLD SID
Sbjct: 61 LGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESID 120
Query: 129 NKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYV 188
+KAL DTF++FG ++SCKVA+DS+GQSKGYGFVQ+ NEE+AQ AI+ LNGML+NDKQVYV
Sbjct: 121 HKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYV 180
Query: 189 GLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRC 248
G F+RRQER KFTNVYV NLAE+ TD+DLK FG +G ITSA+VMKD +GKS+
Sbjct: 181 GPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKG 240
Query: 249 FGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLK 308
FGFVNF++ D AA AVE LNG +DK WYVGRAQK++ERE +LR ++EQ +K +
Sbjct: 241 FGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQ 300
Query: 309 GANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALN 368
+NLY+KNLD SI+DEKLKE+FS FGT+TS KVM D +G SKGSGF AF+ PEEAT A++
Sbjct: 301 SSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMS 360
Query: 369 EMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGP 427
+++GKMI KPLYVA+AQRKE+R+ RLQAQF+Q+R P M P + +P Y G P +G
Sbjct: 361 QLSGKMIESKPLYVAIAQRKEDRRVRLQAQFSQVR-PVAMQPSVGPRMPVYPPGGPGIG- 418
Query: 428 QQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRR 484
QQ++YGQ P ++PPQ GYG+QQQ+ PG+RPGG P++ MP +Q PG
Sbjct: 419 QQMFYGQAPPAMIPPQ-PGYGYQQQLVPGMRPGGGPVPSFFMPMVQPQQQRPGGGRRPGG 477
Query: 485 SGNTHQMQQPQFMRNSNQG--IRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPV 542
++ Q + +G RY R G+ VP P + +
Sbjct: 478 IQHSQQQNPMMQQQMHPRGRMFRY-PQGRGGSGD-----VP-----------PYDMGNNM 520
Query: 543 PVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIES 602
P+ I L S L++A+P+ + MLGE LYPLVE +E A+KVTGMLLEMDQTEVLHL+ES
Sbjct: 521 PLTIGALASNLSNATPEQQRTMLGEVLYPLVEQVEAESAAKVTGMLLEMDQTEVLHLLES 580
Query: 603 PEALKTKVAEAMAVLQEAAARSDVNEKLGSL 633
PEALK KVAEAM VL+ AA E+L SL
Sbjct: 581 PEALKAKVAEAMDVLRSVAA-GGATEQLASL 610
>gi|326516828|dbj|BAJ96406.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 744
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/630 (56%), Positives = 446/630 (70%), Gaps = 25/630 (3%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S + SLYVGDL+ +V ++QL+D+F+Q+ VVSVRVCRD + R SLGYAYVNY+ P DA
Sbjct: 120 SSFPATSLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADA 179
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A A E LNF PING+PIRIMYS+RDPS+RKSG N+FIKNLD SIDNKAL DTF FG +
Sbjct: 180 ARALEMLNFTPINGRPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALHDTFCVFGNI 239
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNV 202
LSCKVA D G+SKGYGFVQ+E +EAA AI+ LNGML+NDK+VYVG FVR+QER
Sbjct: 240 LSCKVATDPAGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGPFVRKQERDNSPG 299
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
S KF NVYV NLAET T++DLK+IFG FGTITS +VM+D DG+S+CFGFVNF+SPD AA
Sbjct: 300 SVKFNNVYVKNLAETTTEDDLKEIFGKFGTITSVVVMRDGDGRSKCFGFVNFESPDEAAL 359
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+ LNG +DK WYVGRAQK++ERE +L+ KFE+ +K + NLYLKNLDD+++
Sbjct: 360 AVQDLNGKKFSDKEWYVGRAQKKSEREMELKEKFEKNLQEAADKYQNTNLYLKNLDDTVD 419
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DEKL+ELF+EFGTITSCKVM D +G S+GSGF AF ++A+RAL EMN KM+G KPLYV
Sbjct: 420 DEKLRELFAEFGTITSCKVMRDSNGASRGSGFVAFKSADDASRALAEMNNKMVGNKPLYV 479
Query: 383 AVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGP--QQLYYGQGTPGLM 440
A+AQRKE+RKARLQAQF+Q+R P+A + P P QQ++YGQ P +
Sbjct: 480 ALAQRKEDRKARLQAQFSQMRP----VPMAQTVGPRMQMLPPGVPVGQQMFYGQ-PPAFI 534
Query: 441 PPQAAGYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFM 497
PQ G+GFQQ PG+RPGG PN++MP Q Q P QR RR+G Q Q
Sbjct: 535 NPQ-PGFGFQQPFMPGMRPGGAPMPNFMMPMVQQGQ-QP-QRPAGRRAGAGGMQQSMQMG 591
Query: 498 RNSNQGIRYLDNARNGTDQ--------SVVSMVPVPFEVSGMPATPVETPRPVPVPISTL 549
+ G R T + V ++ P+E+ GMP + PVPI L
Sbjct: 592 QQQMMGRGGGRGYRYPTGRGMPDPAMHGVGGVMTSPYEMGGMPMRDAGASQ--PVPIGAL 649
Query: 550 TSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTK 609
SALA++ P+ + MLGE LYPLV+ +E A+KVTGMLLEMDQTEVLHL+ESP+ALK K
Sbjct: 650 ASALANSPPETQRMMLGENLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLLESPDALKAK 709
Query: 610 VAEAMAVLQEAAARSDVN--EKLGSLAVNE 637
VAEAM V + A ++ + ++L SL++N+
Sbjct: 710 VAEAMEVFRSAQQHTNQSPEQQLASLSLND 739
>gi|1737492|gb|AAB38974.1| poly(A)-binding protein [Triticum aestivum]
Length = 651
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/634 (55%), Positives = 444/634 (70%), Gaps = 33/634 (5%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S + SLYVGDL+ +V ++QL+D+F+Q+ VVSVRVCRD + R SLGYAYVNY+ P DA
Sbjct: 27 SSFPATSLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADA 86
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A A E LNF PING+PIRIMYS+RDPS+RKSG N+FIKNLD SIDNKAL DTF FG +
Sbjct: 87 ARALEMLNFTPINGRPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFGNI 146
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNV 202
LSCKVA D G+SKGYGFVQ+E +EAA AI+ LNGML+NDK+VYVG FVR+QER
Sbjct: 147 LSCKVATDPAGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGPFVRKQERDNSPG 206
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ KF NVYV NLAET T++DLK+IFG FG ITS +VM+D DG+S+CFGFVNF+SPD AA
Sbjct: 207 NVKFNNVYVKNLAETTTEDDLKEIFGKFGAITSVVVMRDGDGRSKCFGFVNFESPDEAAL 266
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+ LNG +DK WYVGRAQK++ERE +L+ KFE+ +K + NLYLKNLDD+++
Sbjct: 267 AVQDLNGKKFSDKEWYVGRAQKKSEREIELKEKFEKNLQEAADKYQNTNLYLKNLDDTVD 326
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DEKL+ELF+EFGTITSCKVM D +G S+GSGF AF ++A+RAL EMN KM+G KPLYV
Sbjct: 327 DEKLRELFAEFGTITSCKVMRDSNGASRGSGFVAFKSADDASRALAEMNNKMVGNKPLYV 386
Query: 383 AVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGP--QQLYYGQGTPGLM 440
A+AQRKE+RKARLQAQF+Q+R P+A + P P QQ++YGQ P +
Sbjct: 387 ALAQRKEDRKARLQAQFSQMRP----VPMAQTVGPRMQMLPPGVPVGQQMFYGQ-PPAFI 441
Query: 441 PPQAAGYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSG----------- 486
PQ G+GFQQ PG+RPGG PN++MP Q Q P QR RR+G
Sbjct: 442 NPQ-PGFGFQQPFMPGMRPGGAPMPNFMMPMVQQGQ-QP-QRPAGRRAGAGGMQQSMQMG 498
Query: 487 -NTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVP 545
+ G D A +G + S P+E+ GMP + PVP
Sbjct: 499 QQQMLGRGGGRGYRYQTGRGMPDPAMHGVGGVMTS----PYEMGGMPMR--DAGESQPVP 552
Query: 546 ISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEA 605
I L SALA++ P+ + MLGE LYPLV+ +E A+KVTGMLLEMDQTEVLHL+ESP+A
Sbjct: 553 IGALASALANSPPETQRMMLGENLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLLESPDA 612
Query: 606 LKTKVAEAMAVLQEAAARSDVN--EKLGSLAVNE 637
LK KVAEAM VL+ A ++ + ++L SL++N+
Sbjct: 613 LKAKVAEAMEVLRSAQQHTNQSPEQQLASLSLND 646
>gi|297832034|ref|XP_002883899.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
gi|297329739|gb|EFH60158.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
Length = 655
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/636 (56%), Positives = 458/636 (72%), Gaps = 18/636 (2%)
Query: 12 AVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGY 71
A+ + AA + +G SLYVGDL+ NV +SQL+D FSQ+ QVVSVRVCRD + R SLGY
Sbjct: 24 AMVTGPGAAAAAQFGTTSLYVGDLDPNVTDSQLFDAFSQMGQVVSVRVCRDLATRRSLGY 83
Query: 72 AYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
YVN+++PQDAA A + LN++P+NGKP+R+MYSHRDPS+R+SG GN+FIKNLD SID+KA
Sbjct: 84 GYVNFTSPQDAARAIQELNYIPLNGKPVRVMYSHRDPSVRRSGAGNIFIKNLDKSIDHKA 143
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L DTF+ FG ++SCKVA+DS+GQSKGYGFVQ+E EE+AQ A+ LNGML+NDKQVYVG F
Sbjct: 144 LHDTFSVFGNIISCKVAVDSSGQSKGYGFVQYETEESAQKAMGQLNGMLLNDKQVYVGPF 203
Query: 192 VRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGF 251
+RRQER FTNVYV NLAE+ TD+DLK IFG FG ITSA+VMKD +GK + FGF
Sbjct: 204 LRRQERDSTGNKTIFTNVYVKNLAESTTDDDLKNIFGEFGKITSAVVMKDGEGKPKGFGF 263
Query: 252 VNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGAN 311
VNF++ D AA AVE LNG T +DK W+VGRAQK++ERE +L+ ++EQ +K + +N
Sbjct: 264 VNFENADDAAKAVESLNGKTFDDKEWFVGRAQKKSEREMELKVQYEQSLKEAADKFQSSN 323
Query: 312 LYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMN 371
LY+KNLDDS++DEKLKELF+ +GT+TSCKVM D +G S+GSGF AFS PEEAT+A++EM+
Sbjct: 324 LYVKNLDDSVSDEKLKELFTPYGTVTSCKVMRDPNGMSRGSGFVAFSTPEEATKAMSEMS 383
Query: 372 GKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLY 431
GKMI KPLYVAVAQRKE+R+ARLQAQF+Q+R P M P + Q ++
Sbjct: 384 GKMIENKPLYVAVAQRKEDRRARLQAQFSQMR-PVAMPPPVGPRMPIYPPGGPGIGQPMF 442
Query: 432 YGQGTPGLMPPQAAGYGFQQQVFPGLRPGGP---NYIMPYHLQRQVHPGQRT--GVRRSG 486
YGQ P ++ Q G+G+QQQ+ PG+RPGG N+ MP Q Q PG R G+++S
Sbjct: 443 YGQAPPTMISSQ-PGFGYQQQLVPGMRPGGAPMHNFFMPMVQQGQQRPGGRHPGGIQQSQ 501
Query: 487 NTHQMQQPQFMRNSN---QGIRYLDNARNGTDQSVVSMVPVPFEV-SGMPA-TPVETPRP 541
Q+ Q + + RY +G V M +P+E+ S MP PV +
Sbjct: 502 QQQQVPMMQQQHQMHPRGRMFRYPQGRGSGGPPDVPGM--LPYEMGSNMPLRDPVLSQH- 558
Query: 542 VPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIE 601
VPI L S+LA+A+P+ + +LGE LYPLVE +E A+KVTGMLLEMDQTEVLHL+E
Sbjct: 559 --VPIGALASSLANAAPELQRTLLGENLYPLVEQLEAESAAKVTGMLLEMDQTEVLHLLE 616
Query: 602 SPEALKTKVAEAMAVLQEAAARSDVNEKLGSLAVNE 637
SPEALK KVAEAM VL+ AA E+L SL +N+
Sbjct: 617 SPEALKAKVAEAMDVLRSVAAGGSA-EQLASLNLND 651
>gi|357465579|ref|XP_003603074.1| Poly(A)-binding protein [Medicago truncatula]
gi|355492122|gb|AES73325.1| Poly(A)-binding protein [Medicago truncatula]
Length = 622
Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/629 (56%), Positives = 445/629 (70%), Gaps = 35/629 (5%)
Query: 19 AAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSN 78
A VP+ SLYVGDL+ +V +SQLYDLF+Q+ QVVSVR+CRD + + SLGY YVN+SN
Sbjct: 15 APVPNQLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSN 74
Query: 79 PQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAA 138
P DAA A + LNF P+N KPIRIMYSHRDPS+RKSG N+FIKNLD +ID+KAL DTF+
Sbjct: 75 PHDAAKAMDVLNFTPLNNKPIRIMYSHRDPSVRKSGAANIFIKNLDRAIDHKALYDTFSI 134
Query: 139 FGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA 198
FG +LSCK+A+D++G SKGYGFVQFENEE+AQ+AI LNGML+NDK VYVG F R+Q+R
Sbjct: 135 FGNILSCKIAMDASGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVYVGHFQRKQDRD 194
Query: 199 QQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
+ KF NVYV NL+E+VTD+DLK FG +GTITSA+VM+D DGKS+CFGFVNF++ D
Sbjct: 195 NALSNAKFNNVYVKNLSESVTDDDLKNTFGEYGTITSAVVMRDVDGKSKCFGFVNFENAD 254
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
AAA AVE LNG +DK WYVG+A K+ ERE +L+ + EQ +K GANLYLKNLD
Sbjct: 255 AAAEAVEALNGKKFDDKEWYVGKALKKYERELELKERHEQSMKETVDKFYGANLYLKNLD 314
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
DS+ DEKL ELFSEFGT+TSCK++ D G S+GSGF AFS PEEATRAL EMNGKM+ K
Sbjct: 315 DSVTDEKLSELFSEFGTVTSCKILRDPQGISRGSGFVAFSTPEEATRALAEMNGKMVAGK 374
Query: 379 PLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPG 438
PLYVA AQ+KEERKARLQAQF+Q+R P M+P+A +P Y G P +G QQ+ YGQ P
Sbjct: 375 PLYVAPAQKKEERKARLQAQFSQVR-PVTMAPIAPRLPFYPAGVPGMG-QQIMYGQAPPA 432
Query: 439 LMPPQAAGYGFQQQVFPGLRPGG---PNYIMPY-----HLQRQVHPGQRTGVRRSGNTHQ 490
+ AG+G+ QQ+ PG+RPGG PN+ MP QR + +++ ++
Sbjct: 433 FI--SQAGFGYPQQLVPGMRPGGAPMPNFFMPMVQQGQQGQRPGGRRGASPMQQLPHSLP 490
Query: 491 MQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLT 550
M Q Q M + RY RN +P+P G P+ L
Sbjct: 491 MMQQQ-MHPRGRVYRY-PTGRNPQG------IPMPGVAGG-------------TPMQALA 529
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
+ALA+A P+ + MLGE LYPLVE IE A+KVTGMLLEMDQ EVLHLIESPEALKTKV
Sbjct: 530 TALANAPPEQQRTMLGEVLYPLVEKIEHAGAAKVTGMLLEMDQPEVLHLIESPEALKTKV 589
Query: 611 AEAMAVLQEAAAR--SDVNEKLGSLAVNE 637
AEA+ VL+ A + + ++L SL++N+
Sbjct: 590 AEAVDVLRNVAQQQSNSPTDQLASLSLND 618
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/623 (58%), Positives = 438/623 (70%), Gaps = 24/623 (3%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDLE +V +SQLY+LFSQ QVVSVRVCRD + R SLGYAYVN+SNP DAA A E
Sbjct: 37 TSLYVGDLEASVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNFSNPMDAARALE 96
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LNF+P+N KPIR+MYS+RDPS R+SG N+FIKNLD +IDNK L DTF+AFG +LSCKV
Sbjct: 97 MLNFVPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKV 156
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A D GQSKG+GFVQ+E EE AQ+A+K LNGMLINDK VYVG F+R+QER +F
Sbjct: 157 ATDDMGQSKGFGFVQYEKEEFAQSAMKSLNGMLINDKPVYVGPFLRKQERDNSFDKARFN 216
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NV+V NL+E+ T EDL KIF +G ITSA+VM +DGKSRCFGF+NF+SPD A AVE+L
Sbjct: 217 NVFVKNLSESTTKEDLVKIFSEYGNITSAVVMVGTDGKSRCFGFINFESPDDAVRAVEEL 276
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG NDK WY GRAQK++ERE DL+ +FEQ +K +G NLYLKNLDD I+D++L+
Sbjct: 277 NGKKINDKEWYCGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGISDDQLR 336
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
ELFS FG ITSCKVM DQ+G SKGSGF AFS EEA++A+ EMNGKM+ KPLYVA AQR
Sbjct: 337 ELFSTFGKITSCKVMRDQNGVSKGSGFVAFSTREEASQAITEMNGKMLSGKPLYVAFAQR 396
Query: 388 KEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAG 446
KEERKA LQAQF+Q+R P ++P + +P Y AP LG QQL+YGQ M P G
Sbjct: 397 KEERKAMLQAQFSQMR-PVPITPSMTPRLPMYPPMAP-LG-QQLFYGQAP-PPMMPPQPG 452
Query: 447 YGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSG------NTHQMQQPQFM 497
+GFQQQ+ PG+RP G PNY +P Q Q P R G+RRSG Q M
Sbjct: 453 FGFQQQLVPGMRPSGAHMPNYFVPVVQQGQQGP--RPGMRRSGAGSVQGQQSAQSYQQQM 510
Query: 498 RNSNQGIRYLDN-ARNGTDQSVVSMVPV-----PFEVSGMPATPVETPRPVPVPISTLTS 551
+ RY RN + ++ V P+++ G P + PI TLTS
Sbjct: 511 VPRGRVYRYPPGPGRNMPEVQPMAGVGAGGMIQPYDMGGFPVR--DAGLSPAAPIGTLTS 568
Query: 552 ALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVA 611
ALA+A+PD + +LGE LYPLVE +E A+KVTGMLLEMDQTEVLHL+ESPEALK+KVA
Sbjct: 569 ALANATPDQQRTLLGESLYPLVELLEHNQAAKVTGMLLEMDQTEVLHLLESPEALKSKVA 628
Query: 612 EAMAVLQEAAARSDVNEKLGSLA 634
EAM VL+ A + + N LA
Sbjct: 629 EAMDVLRNVAQQQNPNAPTSQLA 651
>gi|359386152|gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis]
Length = 652
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/661 (56%), Positives = 459/661 (69%), Gaps = 51/661 (7%)
Query: 6 AAAATAAVTSATTAAVPSGYG--------NVSLYVGDLEQNVNESQLYDLFSQVAQVVSV 57
A A AA S T + + G + SLYVGDL+ +VN+SQLYDLF+Q+ QVVSV
Sbjct: 10 APVAVAAQPSPATNGIANNGGVGDARQFVSTSLYVGDLDLSVNDSQLYDLFNQMGQVVSV 69
Query: 58 RVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGN 117
RVCRD S R SLGY YVNY+ +A A + LNF P+NGKPIRIMYS+RDP+IRKSG GN
Sbjct: 70 RVCRDLSTRRSLGYGYVNYNAAHEATRALDELNFTPLNGKPIRIMYSYRDPTIRKSGAGN 129
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLN 177
+FIKNLD SIDNKAL DTF+ FG +LSCKVA DS GQS+GYGFVQF+NEE+A++AI LN
Sbjct: 130 IFIKNLDKSIDNKALHDTFSTFGNILSCKVATDSLGQSRGYGFVQFDNEESAKSAIDKLN 189
Query: 178 GMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAI 237
GML+NDKQV+VG F+R+QER +F NVYV NL+ET T++DLKKIFG FG ITS
Sbjct: 190 GMLLNDKQVFVGPFLRKQERESTADKTRFNNVYVKNLSETTTEDDLKKIFGEFGIITSTA 249
Query: 238 VMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
VM+D+DGKS+CFGFVNF PD AA +VE LNG +DK WYVG+AQK+ ERE +L+ KFE
Sbjct: 250 VMRDADGKSKCFGFVNFDDPDDAARSVEALNGKKFDDKEWYVGKAQKKYEREMELKGKFE 309
Query: 298 QERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAF 357
Q +K +G NLY+KNLDDSI+D+KLKELFSEFGTITSCKVM D +G S+GSGF AF
Sbjct: 310 QSLKETADKFEGLNLYVKNLDDSISDDKLKELFSEFGTITSCKVMRDPNGISRGSGFVAF 369
Query: 358 SMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPG 417
S EEA++AL EMNGKM+ KPLYVA+AQRKEER+ARLQAQF+Q+R P G +P
Sbjct: 370 STAEEASKALTEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRPPVG-----PRMPM 424
Query: 418 YHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPG 477
Y AP LG QQL+YGQG P + G+G+QQQ+ PG+R PNY +P V PG
Sbjct: 425 YPPVAPGLG-QQLFYGQGPPIIP--PQPGFGYQQQLVPGMR---PNYFVP-----MVQPG 473
Query: 478 ---QRTGVRRSGN--THQMQQPQFMRNSNQGIRYLDNAR--------NGTDQSVV----S 520
QR G RRSG Q QQP + R L R N D V
Sbjct: 474 QQNQRPGGRRSGTGPMQQAQQPIPLMQP----RMLPRGRIYRYPPGCNIPDVPVAGVPGG 529
Query: 521 MVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVH 580
M+P P+++ GMP +P+ L SALA+ASP+ + +LGE LYPLV+ +E +
Sbjct: 530 MLPGPYDIGGMPFRDAAFSQPMQT--GALASALANASPEQQRTLLGENLYPLVDQLEHDN 587
Query: 581 ASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVL----QEAAARSDVNEKLGSLAVN 636
A+KVTGMLLEMDQTEVLHL+ESPEALK KVAEAM VL Q+ A +++ SL++N
Sbjct: 588 AAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQQATGPSPTDRVASLSLN 647
Query: 637 E 637
+
Sbjct: 648 D 648
>gi|297847300|ref|XP_002891531.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
gi|297337373|gb|EFH67790.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
Length = 669
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/632 (54%), Positives = 443/632 (70%), Gaps = 23/632 (3%)
Query: 26 GNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANA 85
G SLYVGDL+ V +SQL++ FSQ QVVSVRVCRD + R SLGY YVNY+ PQDA+ A
Sbjct: 37 GTTSLYVGDLDATVTDSQLFEAFSQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRA 96
Query: 86 KEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSC 145
LNFM +NG+ IR+MYS RDPS+RKSG GN+FIKNLD SID+KAL +TF+AFG +LSC
Sbjct: 97 LNELNFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFGPILSC 156
Query: 146 KVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK 205
KVA+D +GQSKGYGFVQ++ +EAAQ AI LNGML+NDKQVYVG FV + +R K
Sbjct: 157 KVAVDPSGQSKGYGFVQYDTDEAAQRAIDKLNGMLLNDKQVYVGPFVHKLQRDPSGEKVK 216
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
FTNVYV NL+E+++DE+L K+FG FG TS ++M+D +GKS+ FGFVNF++ D AA AV+
Sbjct: 217 FTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGKSKGFGFVNFENSDDAARAVD 276
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LNG T +DK W+VG+AQK++ERE +L+ KFEQ +K +G+NLY+KNLD+S+ D+K
Sbjct: 277 ALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDK 336
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L+E F+ FGTITSCKVM D G S+GSGF AFS PEEA+RA+ EMNGKMI KPLYVA+A
Sbjct: 337 LREHFAPFGTITSCKVMRDPTGVSRGSGFVAFSTPEEASRAITEMNGKMIVTKPLYVALA 396
Query: 386 QRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQA 444
QRKE+RKARLQAQF+Q+R P M P + + Y G P +G QQL+YGQG P ++PPQ
Sbjct: 397 QRKEDRKARLQAQFSQMR-PVNMPPAVGPRMQMYPPGGPPMG-QQLFYGQGPPAMIPPQ- 453
Query: 445 AGYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNS- 500
G+G+QQQ+ PG+RPGG PN+ MP Q Q Q+ ++ + +
Sbjct: 454 PGFGYQQQLVPGMRPGGSPMPNFFMPMMQQGQQQQQQQQQQQQQRPGGGRRGGALPQPQQ 513
Query: 501 ------------NQGIRYLDNARNGTDQSVVSMVPVPFEV-SGMPATPVETPRPVPVPIS 547
+ RY N +M+ VP++V SG ++P VPI
Sbjct: 514 PSPMMQQQMHPRGRMYRYPQRDVNTMPGLTPNMLSVPYDVSSGGGVHHRDSPASQSVPIG 573
Query: 548 TLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALK 607
L + LA+A+P+ + MLGE LYPLVE +EP A+KVTGMLLEMDQTEVLHL+ESPEALK
Sbjct: 574 ALATQLANAAPEQQRTMLGENLYPLVEQLEPESAAKVTGMLLEMDQTEVLHLLESPEALK 633
Query: 608 TKVAEAMAVLQEAAAR--SDVNEKLGSLAVNE 637
KV EAM VL+ A + ++L SL++ +
Sbjct: 634 AKVTEAMDVLRSVAQQQAGGAADQLASLSLGD 665
>gi|18402769|ref|NP_564554.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|334183191|ref|NP_001185184.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|10120431|gb|AAG13056.1|AC011807_15 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|13877633|gb|AAK43894.1|AF370517_1 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|17978685|gb|AAL47336.1| putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|332194351|gb|AEE32472.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|332194352|gb|AEE32473.1| poly(A) binding protein 8 [Arabidopsis thaliana]
Length = 671
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/629 (55%), Positives = 442/629 (70%), Gaps = 21/629 (3%)
Query: 26 GNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANA 85
G SLYVGDL+ V +SQL++ F+Q QVVSVRVCRD + R SLGY YVNY+ PQDA+ A
Sbjct: 43 GTTSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRA 102
Query: 86 KEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSC 145
LNFM +NG+ IR+MYS RDPS+RKSG GN+FIKNLD SID+KAL +TF+AFG +LSC
Sbjct: 103 LNELNFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFGPILSC 162
Query: 146 KVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK 205
KVA+D +GQSKGYGFVQ++ +EAAQ AI LNGML+NDKQVYVG FV + +R K
Sbjct: 163 KVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYVGPFVHKLQRDPSGEKVK 222
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
FTNVYV NL+E+++DE+L K+FG FG TS ++M+D +GKS+ FGFVNF++ D AA AV+
Sbjct: 223 FTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGKSKGFGFVNFENSDDAARAVD 282
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LNG T +DK W+VG+AQK++ERE +L+ KFEQ +K +G+NLY+KNLD+S+ D+K
Sbjct: 283 ALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDK 342
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L+E F+ FGTITSCKVM D G S+GSGF AFS PEEATRA+ EMNGKMI KPLYVA+A
Sbjct: 343 LREHFAPFGTITSCKVMRDPSGVSRGSGFVAFSTPEEATRAITEMNGKMIVTKPLYVALA 402
Query: 386 QRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQA 444
QRKE+RKARLQAQF+Q+R P M P + + Y G P +G QQL+YGQG P ++P
Sbjct: 403 QRKEDRKARLQAQFSQMR-PVNMPPAVGPRMQMYPPGGPPMG-QQLFYGQGPPAMIP--Q 458
Query: 445 AGYGFQQQVFPGLRPGG---PNYIMPY----------HLQRQVHPGQRTGVRRSGNTHQM 491
G+G+QQQ+ PG+RPGG PN+ MP Q+Q G R G
Sbjct: 459 PGFGYQQQLVPGMRPGGSPMPNFFMPMMQQGQQQQQQQQQQQRPGGGRRGALPQPQQPSP 518
Query: 492 QQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEV-SGMPATPVETPRPVPVPISTLT 550
Q M + RY N +M+ VP++V SG ++P PVPI L
Sbjct: 519 MMQQQMHPRGRMYRYPQRDVNTMPGPTQNMLSVPYDVSSGGGVHHRDSPTSQPVPIVALA 578
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
+ LA+A+P+ + MLGE LYPLVE +EP A+KVTGMLLEMDQTEVLHL+ESPEALK KV
Sbjct: 579 TRLANAAPEQQRTMLGENLYPLVEQLEPESAAKVTGMLLEMDQTEVLHLLESPEALKAKV 638
Query: 611 AEAMAVLQEAAAR--SDVNEKLGSLAVNE 637
EAM VL+ A + ++L SL++ +
Sbjct: 639 TEAMDVLRSVAQQQAGGAADQLASLSLGD 667
>gi|356514396|ref|XP_003525892.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 630
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/645 (55%), Positives = 449/645 (69%), Gaps = 38/645 (5%)
Query: 4 TGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQ 63
T AAA+ A S TT +SLYVGDL+ +VN+ QLYDLF+QVAQVVSVR+CRD
Sbjct: 9 TNDAAASGANPSMTT---------ISLYVGDLDHDVNDPQLYDLFNQVAQVVSVRICRDV 59
Query: 64 SKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
+ + SLGY YVN+SN +DAA A + LNF P+NGK IRIMYS RDPS RKSG NVFIKNL
Sbjct: 60 ATQQSLGYGYVNFSNARDAAKAIDVLNFTPLNGKTIRIMYSIRDPSARKSGAANVFIKNL 119
Query: 124 DTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND 183
D +ID+KAL DTF+AFG +LSCK+A D++GQSKG+GFVQFE+EE+AQNAI LNGMLIND
Sbjct: 120 DKAIDHKALFDTFSAFGNILSCKIATDASGQSKGHGFVQFESEESAQNAIDKLNGMLIND 179
Query: 184 KQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
KQVYVG F R+Q+R KF NVYV NL E T+ DLK IFG +G ITSA+VM+D D
Sbjct: 180 KQVYVGPFQRKQDRESALSGTKFNNVYVKNLFEATTEADLKSIFGEYGAITSAVVMRDVD 239
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
GKS+ FGFVNF + + AA AVE LNG + K WYVG+AQK++ERE +L+ + EQ
Sbjct: 240 GKSKGFGFVNFANVEDAAKAVEALNGKNFDGKEWYVGKAQKKSERELELKERNEQSTKET 299
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEA 363
+K G NLY+KNLDDS+ DE+L+ELFSEFGTITSCKVM D G S+GSGF AFS+ E A
Sbjct: 300 VDKYHGTNLYIKNLDDSVGDEELRELFSEFGTITSCKVMRDPSGISRGSGFVAFSIAEGA 359
Query: 364 TRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGA 422
+ AL EMNGKM+ KPLYVA+AQRKE+R+ARLQAQF+Q R P ++P ++ +P Y GA
Sbjct: 360 SWALGEMNGKMVAGKPLYVALAQRKEDRRARLQAQFSQAR-PVAITPNVSPRMPLYPLGA 418
Query: 423 PRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGG-PNYIMPYHLQRQVHPGQRTG 481
P +G QQL YGQ P ++P A +G+QQ PG+RPGG PN+ +P +Q+ + G
Sbjct: 419 PGIG-QQLLYGQAAPSMIP--QAAFGYQQHFVPGMRPGGAPNFYVPL-VQQGQQGQRSGG 474
Query: 482 VRRSGNTHQMQQP-----QFMRNSNQGIRYL--DNARNGTDQSVVSMVPVPFEVSGMPAT 534
R +G Q+QQP Q M RY N +N +++G+P
Sbjct: 475 QRGAGPMQQLQQPLPLMHQQMLPRGHVYRYPPGSNMQN-------------IQLAGVPGG 521
Query: 535 PVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQT 594
V P+P L SALA+A+P+ + MLGE LYPLV+ +E A+KVTGMLLEMDQ
Sbjct: 522 MVSYGIGQPMPTQALASALANATPEQQRTMLGEALYPLVDKLEHETAAKVTGMLLEMDQP 581
Query: 595 EVLHLIESPEALKTKVAEAMAVLQEAAARSDVN--EKLGSLAVNE 637
EVLHLIESP+ALK KV EAM VL++ + + ++L SL++N+
Sbjct: 582 EVLHLIESPDALKAKVVEAMDVLRKVTQQQSNSPADQLASLSLND 626
>gi|356510461|ref|XP_003523956.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
gi|83853808|gb|ABC47841.1| poly(A)-binding protein [Glycine max]
Length = 630
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/634 (55%), Positives = 449/634 (70%), Gaps = 26/634 (4%)
Query: 13 VTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYA 72
+ +A + A PS +SLYVGDL +VN+ QLYDLF+QVAQVVSVR+CRD + + SLGY
Sbjct: 10 IDAAASGANPS-LTTISLYVGDLHHDVNDPQLYDLFNQVAQVVSVRICRDVATQQSLGYG 68
Query: 73 YVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKAL 132
YVN+SN DAA A + LNF P+NGK IRIMYS RDPS RKSG NVFIKNLD +ID+KAL
Sbjct: 69 YVNFSNAHDAAKAIDVLNFTPLNGKIIRIMYSIRDPSARKSGAANVFIKNLDKAIDHKAL 128
Query: 133 CDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFV 192
DTF+AFG +LSCKVA D++GQSKG+GFVQFE+EE+AQNAI LNGMLINDKQV+VG F+
Sbjct: 129 YDTFSAFGNILSCKVATDASGQSKGHGFVQFESEESAQNAIDKLNGMLINDKQVFVGPFL 188
Query: 193 RRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFV 252
R+Q+R KF NV+V NL +++T+ DL++IFG +G ITSA+VM+D DGKS+ FGFV
Sbjct: 189 RKQDRESALSGTKFNNVFVKNLLDSMTEADLERIFGEYGAITSAVVMRDVDGKSKGFGFV 248
Query: 253 NFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANL 312
NF + D AA AVE LNG + K WYVG+AQK++ERE +L+ + EQ +K G NL
Sbjct: 249 NFANVDDAAKAVEALNGKNFDGKEWYVGKAQKKSERELELKGQHEQITKETVDKYHGTNL 308
Query: 313 YLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNG 372
Y+KNLDDS+ DE+L ELFSEFGTITSCKVM D +G S+GSGF +FS+ E ATRAL EMNG
Sbjct: 309 YIKNLDDSVGDEELMELFSEFGTITSCKVMRDPNGISRGSGFVSFSIAEGATRALGEMNG 368
Query: 373 KMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLY 431
KM+ KPLYVA+AQRKE+R+ARLQAQF+Q R P ++P ++ +P Y GAP +G QQ
Sbjct: 369 KMVAGKPLYVALAQRKEDRRARLQAQFSQSR-PAAITPNVSPRMPLYPLGAPAIG-QQFL 426
Query: 432 YGQGTPGLMPPQAAGYGFQQQVFPGLRPGG-PNYIMPYHLQRQVHPGQRTGVRRSGNTHQ 490
YGQ P +P A +G+QQ PG+RPGG PN+ +P +Q+ + G R SG Q
Sbjct: 427 YGQAAPATIP--QAAFGYQQHFVPGMRPGGAPNFYVPL-VQQGQQGQRPGGHRGSGPMQQ 483
Query: 491 MQQP-----QFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVP 545
+QQP Q M RY +G++ + +++G+P V +P
Sbjct: 484 LQQPLPLMHQQMLPRGHVYRY----PSGSNMQNI-------QLAGVPGGMVTYGIGQQMP 532
Query: 546 ISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEA 605
L SALA+A+P+ + MLGE LYPLV+ +E A+KVTGMLLEMDQ EVLHLIESP+A
Sbjct: 533 TQALASALANATPEQQRTMLGEALYPLVDKLEHEAAAKVTGMLLEMDQPEVLHLIESPDA 592
Query: 606 LKTKVAEAMAVLQEAAARSDVN--EKLGSLAVNE 637
LK KV EAM VL++ + + ++L SL++N+
Sbjct: 593 LKAKVVEAMDVLKKVTQQQSNSPADQLASLSLND 626
>gi|297741250|emb|CBI32381.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/600 (57%), Positives = 430/600 (71%), Gaps = 20/600 (3%)
Query: 22 PSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQD 81
PS + + SLYVGDL+ NV +SQL+DLFSQ+AQVVS+RVCRD + SLGY YVNY++ +D
Sbjct: 163 PSRFASASLYVGDLDLNVTDSQLHDLFSQLAQVVSIRVCRDSTTHRSLGYGYVNYTDLED 222
Query: 82 AANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGT 141
AA A + LNF P+NGKPIRIMYSHRDPSIRKSG GN+FIKNLD ID+KAL DTF+AFG
Sbjct: 223 AARALDVLNFTPLNGKPIRIMYSHRDPSIRKSGTGNIFIKNLDKGIDHKALHDTFSAFGN 282
Query: 142 VLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQN 201
+LSCKVA D++G SKG+GFVQF++EEAAQ AI LNGML+NDKQV+VG FVR+QER
Sbjct: 283 ILSCKVATDASGMSKGHGFVQFDSEEAAQKAIDKLNGMLLNDKQVFVGPFVRKQERESTI 342
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
KF NV+V N++E +T+EDL +IFG FG ITS +VM+D DGKS+CFGFVNF++ D AA
Sbjct: 343 NKEKFNNVFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDGDGKSKCFGFVNFENVDDAA 402
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
+VE LNG +DK WYVG+AQK++ERE +L+++FEQ +K +GANLY+KNLDDSI
Sbjct: 403 MSVEALNGQKFDDKEWYVGKAQKKSEREIELKSRFEQNMKEAVDKFQGANLYIKNLDDSI 462
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
D+KLKELF++FGTITSCKVM D +G S+GSGF AFS PEEA+RAL EMN KM+ KPLY
Sbjct: 463 GDDKLKELFAQFGTITSCKVMRDPNGLSRGSGFVAFSSPEEASRALAEMNSKMVVSKPLY 522
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMP 441
VA+AQRKE+R+ARLQAQF+Q+R + +P Y P LG QQ++YGQ +
Sbjct: 523 VALAQRKEDRRARLQAQFSQMRPVPMPPSVVPRLPMYPPSGPGLG-QQMFYGQAP-PAII 580
Query: 442 PQAAGYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMR 498
P G+G+QQQ+ PG+RP G PN+ +P Q Q + R MQQ Q +
Sbjct: 581 PPQPGFGYQQQLVPGMRPAGPPMPNFFVPIVQQGQQ---GQRPGGRRAGAVPMQQTQ-QQ 636
Query: 499 NSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASP 558
+ L R V P +S +P + PV L +ALA+A P
Sbjct: 637 VPLMQQQMLPRGR-------VFRYPPGRGLSDVPMPAISQSIPV----GALATALANAPP 685
Query: 559 DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
++ MLGE LYPLVE +EP A+KVTGMLLEMDQTEVLHL+ESP+ALK KVAEAM VL+
Sbjct: 686 AEQRTMLGENLYPLVEQLEPEMAAKVTGMLLEMDQTEVLHLLESPDALKAKVAEAMEVLR 745
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 145/429 (33%), Positives = 218/429 (50%), Gaps = 68/429 (15%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ SLYVGDLE NVN+SQLYDLFSQ+ VVSVRVCRD S R SLGY YVNYSNPQD
Sbjct: 27 FVTTSLYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDEKE 86
Query: 85 A------------------------------------------KEALNFMPINGKPIRIM 102
K LNF+ + G+ +
Sbjct: 87 KETIYEGFCVFCLIPSNYAIFFVLGFSYIHKKRRGKERGGELQKRELNFLRVGGEMAEVQ 146
Query: 103 Y-------SHRDPSIRKSGY--GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNG 153
++ +P+I S + ++++ +LD ++ + L D F+ V+S +V DS
Sbjct: 147 DHEGLLSGTNDEPNIGPSRFASASLYVGDLDLNVTDSQLHDLFSQLAQVVSIRVCRDSTT 206
Query: 154 -QSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVN 212
+S GYG+V + + E A A+ +LN +N K + + ++ R +++ + N+++
Sbjct: 207 HRSLGYGYVNYTDLEDAARALDVLNFTPLNGKPIRI-MYSHRDPSIRKSGT---GNIFIK 262
Query: 213 NLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTN 272
NL + + + L F FG I S V D+ G S+ GFV F S +AA A++KLNG
Sbjct: 263 NLDKGIDHKALHDTFSAFGNILSCKVATDASGMSKGHGFVQFDSEEAAQKAIDKLNGMLL 322
Query: 273 NDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSE 332
NDK +VG ++ ERE+ + K K N+++KN+ + + +E L +F E
Sbjct: 323 NDKQVFVGPFVRKQERESTI------------NKEKFNNVFVKNISEGMTEEDLTRIFGE 370
Query: 333 FGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERK 392
FG ITS VM D G SK GF F ++A ++ +NG+ K YV AQ+K ER+
Sbjct: 371 FGPITSVVVMRDGDGKSKCFGFVNFENVDDAAMSVEALNGQKFDDKEWYVGKAQKKSERE 430
Query: 393 ARLQAQFAQ 401
L+++F Q
Sbjct: 431 IELKSRFEQ 439
>gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315010|gb|EFH45433.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/635 (56%), Positives = 448/635 (70%), Gaps = 34/635 (5%)
Query: 8 AATAAVTSA---TTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQS 64
+T AVTSA + A +G+G SLYVGDL+ NV +SQL+D FSQ+ VVSVRVCRD +
Sbjct: 13 GSTVAVTSAPVTSGGATAAGFGTTSLYVGDLDVNVTDSQLFDAFSQMGPVVSVRVCRDLA 72
Query: 65 KRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLD 124
R SLGY YVN++NPQDAA A + LN++P+ GKPIR+MYSHRDPS+R+SG GN+FIKNLD
Sbjct: 73 TRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLD 132
Query: 125 TSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDK 184
SID+KAL DTF+ FG ++SCKVA+DS+GQSKGYGFVQ+ NEE+AQ AI+ LNGML+NDK
Sbjct: 133 ESIDHKALHDTFSVFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDK 192
Query: 185 QVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG 244
QVYVG F+RRQER KFTNVYV NLAE+ TD+DLK FG +G ITSA+VMKD DG
Sbjct: 193 QVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGDG 252
Query: 245 KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRY 304
KS+ FGFVNF++ D AA AVE LNG +DK WYVGRAQK++ERE +LR ++EQ
Sbjct: 253 KSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAA 312
Query: 305 EKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEAT 364
+K + +NLY+KNLD SI+DEKLKE+FS FGT+TSCKVM D +G SKGSGF AFS PEEAT
Sbjct: 313 DKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSCKVMRDPNGTSKGSGFVAFSTPEEAT 372
Query: 365 RALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAP 423
A+++++GKMI KPLYVA+AQRKE+R+ AQF+Q+R P M P + +P Y G P
Sbjct: 373 EAMSQLSGKMIESKPLYVAIAQRKEDRR----AQFSQVR-PVAMQPSVGPRMPVYPPGGP 427
Query: 424 RLGPQQLYYGQGTPGLMPPQAAGYGFQQQVF---PGLRPGGPNYIMPYHLQRQVHPGQRT 480
+G QQ++YGQG P ++PPQ G+G+QQQ+ GPN+ MP Q+Q PG
Sbjct: 428 GIG-QQMFYGQGPPTMIPPQ-PGFGYQQQLVPGMRPGGGPGPNFFMPMVQQQQQRPGGGR 485
Query: 481 GVRRSGNTHQMQQPQFMRNSNQG--IRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVET 538
+ Q + +G RY R G+ + VP P+++
Sbjct: 486 RPGGIQHPQQQNPMMQQQMHPRGRMFRY-PQGRGGSGE-----VP-PYDMGN------NM 532
Query: 539 PRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLH 598
P P+ L S LA+ASP+ + MLGE LYPLVE +E A+KVTGMLLEMDQTEVLH
Sbjct: 533 PLPI----GALASHLANASPEQQRTMLGESLYPLVEQLEAESAAKVTGMLLEMDQTEVLH 588
Query: 599 LIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSL 633
L+ESPEALK KVAEAM VL+ AA E+L SL
Sbjct: 589 LLESPEALKAKVAEAMDVLRSVAA-GGAAEQLASL 622
>gi|398327|emb|CAA81127.1| poly(A)-mRNA binding protein [Anemia phyllitidis]
Length = 638
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/637 (57%), Positives = 440/637 (69%), Gaps = 26/637 (4%)
Query: 9 ATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSS 68
A A T AT + S Y SLYVGDL+ +V+ES+LY++F+Q+ QVVS+RVCRD + S
Sbjct: 7 AQQAPTIATPISGSSPYVAPSLYVGDLDPDVSESELYEVFNQIGQVVSIRVCRDLMTKKS 66
Query: 69 LGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSID 128
LGYAYVNY QDA+ A E LNF + GKPIRIMYSHRDPSIRKSG N+FIKNL+ SID
Sbjct: 67 LGYAYVNYGTHQDASQALELLNFTLVKGKPIRIMYSHRDPSIRKSGAANIFIKNLEKSID 126
Query: 129 NKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYV 188
NKAL DTF+AFGT+LSC+V +D G SKGYGFVQFE EE+AQ AI+ +NGMLIND+QV V
Sbjct: 127 NKALHDTFSAFGTILSCRVVMDDAGNSKGYGFVQFEKEESAQIAIEKVNGMLINDRQVSV 186
Query: 189 GLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRC 248
F+R+QER + S F NVYV NLAE TDEDL+K+F FG I+SA+VM+D+DGKS+C
Sbjct: 187 APFIRKQERDMAS-SKNFNNVYVKNLAEATTDEDLRKVFAGFGPISSAVVMRDADGKSKC 245
Query: 249 FGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLK 308
FGFVNF++ D AA AVE LNG N+K WYVGRAQK++EREA+L+AKFEQ R + EK +
Sbjct: 246 FGFVNFENVDDAANAVENLNGKLINEKEWYVGRAQKKSEREAELKAKFEQVRKEKEEKFQ 305
Query: 309 GANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALN 368
G NLYLKN+DDSI+DEKL+ELF+ FGT+TSCKVM G S GSGF FS PEEA +A+N
Sbjct: 306 GVNLYLKNIDDSIDDEKLRELFAVFGTVTSCKVMKSPQGQSMGSGFVTFSAPEEAMQAVN 365
Query: 369 EMNGKMIGRKPLYVAVAQRKEERKARLQAQFA--QIRAPGGMSPLASGIPGYHHGAPRLG 426
+MNGKM+G KPLYVA+AQRKEER+ARLQAQFA QI AP + YH G +G
Sbjct: 366 DMNGKMVGSKPLYVALAQRKEERRARLQAQFAQMQIVAPNAPPMAPNPPSMYHPGPQGMG 425
Query: 427 PQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRP---GGPNYIMPYHLQRQVHPGQRTGVR 483
Q++YGQ PGL+P QA G+G+QQ + P +RP G PNY MP +QR QR R
Sbjct: 426 -HQMFYGQPAPGLLPSQANGFGYQQPMVPTMRPTSAGVPNYFMP--VQRPGQQIQRPVNR 482
Query: 484 RSG------NTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVE 537
R G HQ QF R N+ +RY +R D ++ M A
Sbjct: 483 RGGVGPLQPQHHQPPPQQFPRGGNRSMRYSQFSRTMPDSTMQGF-------GMMGAANAS 535
Query: 538 TPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVL 597
+P L SALASASP+++ MLGEQLYPLV+ +E HA KVTGMLLEMDQ EVL
Sbjct: 536 NIGLMP----ALASALASASPEEQRVMLGEQLYPLVDRLEHDHAGKVTGMLLEMDQPEVL 591
Query: 598 HLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
HLI+ LK KVAEAM VL+ A N L LA
Sbjct: 592 HLIDLLRQLKAKVAEAMDVLRMAQGSISSNSPLDQLA 628
>gi|224105583|ref|XP_002313862.1| predicted protein [Populus trichocarpa]
gi|222850270|gb|EEE87817.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/644 (55%), Positives = 437/644 (67%), Gaps = 58/644 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ SLYVGDLE NV +SQLYDLF+QV QVVSVRVCRD + R SLGY YVNYSNPQDAA
Sbjct: 22 FVTTSLYVGDLEANVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAAR 81
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A E LNF P+NG PIR+MYSHRDPS+RKSG GN+FIKNLD +ID+KAL DTF+ FG +LS
Sbjct: 82 ALEVLNFTPVNGSPIRVMYSHRDPSVRKSGAGNIFIKNLDKAIDHKALHDTFSVFGNILS 141
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA D +GQSKGYGFVQF++EEAAQ AI+ LNGML+NDKQVYVG F+R+QER
Sbjct: 142 CKVATDPSGQSKGYGFVQFDSEEAAQKAIEKLNGMLLNDKQVYVGPFLRKQERDTATDKT 201
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
+F NV+V NL+ET +EDL K FG FGTITS +VM+D DGKSRCFGFVNF++ D AA A
Sbjct: 202 RFNNVFVKNLSETTAEEDLNKAFGEFGTITSVVVMRDGDGKSRCFGFVNFENADDAAKAA 261
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
E LNG +DK W+VG+AQK+ ERE +L+ +FEQ +K +GANLY+KNLDDSI DE
Sbjct: 262 EALNGKKFDDKEWFVGKAQKKYEREVELKQRFEQSMKEAADKFQGANLYIKNLDDSIGDE 321
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
K+KELFS FGTITSCKVM D +G S+GSGF AFS PEEA+RAL EMNGKM+ KPLYVA+
Sbjct: 322 KIKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALLEMNGKMVASKPLYVAL 381
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMP--- 441
AQRKE+R+ARL S L +H QL Q TP L+P
Sbjct: 382 AQRKEDRRARL-------------SFLKCDQLQWHL--------QLVVCQCTPLLVPVLD 420
Query: 442 --------------PQAAGYGFQQQVFPGLRPGG---PNYIMPY---HLQRQVHPGQRTG 481
P+ G+G+QQQ+ PG+RPGG PN+ +P Q Q G+R G
Sbjct: 421 NKYSMDKAHLLSCHPRLPGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQGQRPGGRRAG 480
Query: 482 VRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVS----MVPVPFEVSGMPATPVE 537
+ Q M + RY R D + M+ VP+++ GMP
Sbjct: 481 TGQQSQQPVQLMQQQMLPRGRVYRY-PPGRGLPDVPMTGVAGGMLSVPYDMGGMPMRDAA 539
Query: 538 TPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVL 597
+P+P I L +ALA+A+PD + MLGE LYPLVE +EP A+KVTGMLLEMDQTEVL
Sbjct: 540 LSQPIP--IGALATALANATPDQQRTMLGENLYPLVEQLEPEAAAKVTGMLLEMDQTEVL 597
Query: 598 HLIESPEALKTKVAEAMAVL----QEAAARSDVNEKLGSLAVNE 637
HL+ESPEALK+KV EAM VL Q+A +D +L SL++N+
Sbjct: 598 HLLESPEALKSKVNEAMEVLRTVQQQATGTAD---QLASLSLND 638
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 102/195 (52%), Gaps = 25/195 (12%)
Query: 203 SPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-SDGKSRCFGFVNFQSPDA 259
+P F T++YV +L VTD L +F G + S V +D + +S +G+VN+ +P
Sbjct: 19 NPNFVTTSLYVGDLEANVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQD 78
Query: 260 AAAAVEKLNGTTNND---KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
AA A+E LN T N +V Y + R+ +R K N+++KN
Sbjct: 79 AARALEVLNFTPVNGSPIRVMY-------SHRDPSVR------------KSGAGNIFIKN 119
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
LD +I+ + L + FS FG I SCKV D G SKG GF F E A +A+ ++NG ++
Sbjct: 120 LDKAIDHKALHDTFSVFGNILSCKVATDPSGQSKGYGFVQFDSEEAAQKAIEKLNGMLLN 179
Query: 377 RKPLYVAVAQRKEER 391
K +YV RK+ER
Sbjct: 180 DKQVYVGPFLRKQER 194
>gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
gi|297324519|gb|EFH54939.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
Length = 655
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 341/625 (54%), Positives = 441/625 (70%), Gaps = 36/625 (5%)
Query: 11 AAVTSATTAAVPSGYGN-----VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSK 65
+VT++ T + G G SLYVGDL+ NV +SQLYD F++V QVVSVRVCRD +
Sbjct: 19 GSVTASATLGIGGGDGVNHGALCSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAAT 78
Query: 66 RSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDT 125
+SLGY YVNYSN +DA A + LN+ +NGK IRI YS RD S R+SG GN+F+KNLD
Sbjct: 79 NTSLGYGYVNYSNTEDAEKAMQKLNYSTLNGKMIRITYSSRDSSARRSGVGNLFVKNLDK 138
Query: 126 SIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQ 185
S+DNK L +TF+ GT++SCKVA D GQS+GYGFVQF+ E++A+NAI+ LNG ++NDKQ
Sbjct: 139 SVDNKTLHETFSGCGTIVSCKVAADHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQ 198
Query: 186 VYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK 245
++VG F+R++ER KFTNVYV NL+E TD++LK FG +G+I+SA+VM+D DGK
Sbjct: 199 IFVGPFLRKEERESAADKMKFTNVYVKNLSEVTTDDELKTTFGQYGSISSAVVMRDGDGK 258
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYE 305
SRCFGFVNF++P+ AA AVE LNG +DK WYVG+AQK++ERE +L ++EQ
Sbjct: 259 SRCFGFVNFENPEDAARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDAGN 318
Query: 306 KLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATR 365
K G NLY+KNLDD++ DEKL+ELF+EFGTITSCKVM D G SKGSGF AFS EA+R
Sbjct: 319 KFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASR 378
Query: 366 ALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRL 425
LNEMNGKM+G KPLYVA+AQRKEER+A+LQAQF+Q+R P + + +P + GAP L
Sbjct: 379 VLNEMNGKMVGGKPLYVALAQRKEERRAKLQAQFSQMR-PAFIPGVGPRMPIFPGGAPGL 437
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQ---RTGV 482
G QQ++YGQG+P ++P Q G+G+Q Q+ PGLRP P + PGQ R G
Sbjct: 438 G-QQIFYGQGSPPIIPHQ-PGFGYQPQLVPGLRPS----FFP-----MMQPGQQGPRPGG 486
Query: 483 RRSGN---THQMQQPQ-----FMRNSNQGIRYLDNARNGTDQSVV-SMVPVPFEVSGMPA 533
RRSG+ HQ QQP M +G RY RN D ++ MVPV ++++GMP
Sbjct: 487 RRSGDGPMRHQHQQPMPYMQPQMMPRGRGYRYPPGGRNMPDGPMLGGMVPVAYDMNGMPI 546
Query: 534 TPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQ 593
P+ L ++LA+A+P + +LGE LYPLV+ IE +A+KVTGMLLEMDQ
Sbjct: 547 A-------QPMSAGQLATSLANATPAQQRTLLGESLYPLVDQIEHENAAKVTGMLLEMDQ 599
Query: 594 TEVLHLIESPEALKTKVAEAMAVLQ 618
TEVLHL+ESPEAL KV+EA+ VL+
Sbjct: 600 TEVLHLLESPEALNAKVSEALDVLR 624
>gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding protein [Arabidopsis thaliana]
Length = 662
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 344/635 (54%), Positives = 443/635 (69%), Gaps = 45/635 (7%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL+ NV +SQLYD F++V QVVSVRVCRD + +SLGY YVNYSN DA A +
Sbjct: 46 CSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQ 105
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LN+ +NGK IRI YS RD S R+SG GN+F+KNLD S+DNK L + F+ GT++SCKV
Sbjct: 106 KLNYSYLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKV 165
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A D GQS+GYGFVQF+ E++A+NAI+ LNG ++NDKQ++VG F+R++ER KFT
Sbjct: 166 ATDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLRKEERESAADKMKFT 225
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NVYV NL+E TD++LK FG +G+I+SA+VM+D DGKSRCFGFVNF++P+ AA AVE L
Sbjct: 226 NVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPEDAARAVEAL 285
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG +DK WYVG+AQK++ERE +L ++EQ K G NLY+KNLDD++ DEKL+
Sbjct: 286 NGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGLNLYVKNLDDTVTDEKLR 345
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
ELF+EFGTITSCKVM D G SKGSGF AFS EA+R LNEMNGKM+G KPLYVA+AQR
Sbjct: 346 ELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQR 405
Query: 388 KEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGY 447
KEER+A+LQAQF+Q+R P + + +P + GAP LG QQ++YGQG P ++P Q G+
Sbjct: 406 KEERRAKLQAQFSQMR-PAFIPGVGPRMPIFTGGAPGLG-QQIFYGQGPPPIIPHQ-PGF 462
Query: 448 GFQQQVFPGLRP---GGPNYIMPYHLQRQVHPGQ---RTGVRRSGN---THQMQQPQ--- 495
G+Q Q+ PG+RP GGP + PGQ R G RRSG+ HQ QQP
Sbjct: 463 GYQPQLVPGMRPAFFGGP----------MMQPGQQGPRPGGRRSGDGPMRHQHQQPMPYM 512
Query: 496 --FMRNSNQGIRYLDNARNGTDQSVV-SMVPVPFEVSGMPATPVETPRPVPVPISTLTSA 552
M +G RY RN D + MVPV ++++ MP + P+ L ++
Sbjct: 513 QPQMMPRGRGYRYPSGGRNMPDGPMPGGMVPVAYDMNVMPYS-------QPMSAGQLATS 565
Query: 553 LASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAE 612
LA+A+P + +LGE LYPLV+ IE HA+KVTGMLLEMDQTEVLHL+ESPEAL KV+E
Sbjct: 566 LANATPAQQRTLLGESLYPLVDQIESEHAAKVTGMLLEMDQTEVLHLLESPEALNAKVSE 625
Query: 613 AMAVL----QEAAARSDVNEK------LGSLAVNE 637
A+ VL Q ++ SD N+ L SL++N+
Sbjct: 626 ALDVLRNVNQPSSQGSDGNKSGSPSDLLASLSIND 660
>gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidopsis thaliana]
gi|2642429|gb|AAB87097.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|15292851|gb|AAK92796.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|19310779|gb|AAL85120.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330252352|gb|AEC07446.1| poly(A) binding protein 4 [Arabidopsis thaliana]
Length = 662
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 343/635 (54%), Positives = 443/635 (69%), Gaps = 45/635 (7%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL+ NV +SQLYD F++V QVVSVRVCRD + +SLGY YVNYSN DA A +
Sbjct: 46 CSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQ 105
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LN+ +NGK IRI YS RD S R+SG GN+F+KNLD S+DNK L + F+ GT++SCKV
Sbjct: 106 KLNYSYLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKV 165
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A D GQS+GYGFVQF+ E++A+NAI+ LNG ++NDKQ++VG F+R++ER KFT
Sbjct: 166 ATDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLRKEERESAADKMKFT 225
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NVYV NL+E TD++LK FG +G+I+SA+VM+D DGKSRCFGFVNF++P+ AA AVE L
Sbjct: 226 NVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPEDAARAVEAL 285
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG +DK WYVG+AQK++ERE +L ++EQ K G NLY+KNLDD++ DEKL+
Sbjct: 286 NGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGLNLYVKNLDDTVTDEKLR 345
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
ELF+EFGTITSCKVM D G SKGSGF AFS EA+R LNEMNGKM+G KPLYVA+AQR
Sbjct: 346 ELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQR 405
Query: 388 KEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGY 447
KEER+A+LQAQF+Q+R P + + +P + GAP LG QQ++YGQG P ++P Q G+
Sbjct: 406 KEERRAKLQAQFSQMR-PAFIPGVGPRMPIFTGGAPGLG-QQIFYGQGPPPIIPHQ-PGF 462
Query: 448 GFQQQVFPGLRP---GGPNYIMPYHLQRQVHPGQ---RTGVRRSGN---THQMQQPQ--- 495
G+Q Q+ PG+RP GGP + PGQ R G RRSG+ HQ QQP
Sbjct: 463 GYQPQLVPGMRPAFFGGP----------MMQPGQQGPRPGGRRSGDGPMRHQHQQPMPYM 512
Query: 496 --FMRNSNQGIRYLDNARNGTDQSVV-SMVPVPFEVSGMPATPVETPRPVPVPISTLTSA 552
M +G RY RN D + MVPV ++++ MP + P+ L ++
Sbjct: 513 QPQMMPRGRGYRYPSGGRNMPDGPMPGGMVPVAYDMNVMPYS-------QPMSAGQLATS 565
Query: 553 LASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAE 612
LA+A+P + +LGE LYPLV+ IE HA+KVTGMLLEMDQTEVLHL+ESPEAL KV+E
Sbjct: 566 LANATPAQQRTLLGESLYPLVDQIESEHAAKVTGMLLEMDQTEVLHLLESPEALNAKVSE 625
Query: 613 AMAVL----QEAAARSDVNEK------LGSLAVNE 637
A+ VL Q ++ S+ N+ L SL++N+
Sbjct: 626 ALDVLRNVNQPSSQGSEGNKSGSPSDLLASLSIND 660
>gi|449501704|ref|XP_004161443.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
2-like [Cucumis sativus]
Length = 576
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 322/548 (58%), Positives = 403/548 (73%), Gaps = 16/548 (2%)
Query: 82 AANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGT 141
AA A + LNF P NGKPIR+MYSHRDPSIRKSG GN+FIKNLD +ID+KAL DTF+AFG+
Sbjct: 5 AARALDVLNFTPXNGKPIRVMYSHRDPSIRKSGAGNIFIKNLDKAIDHKALHDTFSAFGS 64
Query: 142 VLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQN 201
+LSCKVA+DS+GQSKGYGFVQF+NEE+A AI+ LNGML+NDKQVYVG F+R+QER
Sbjct: 65 ILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGMLLNDKQVYVGPFLRKQERDGVV 124
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
KF NV+V NL+ET T+EDL K F FGT+TS +VM+D+DGKSRCFGFVNF++ D AA
Sbjct: 125 DKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGKSRCFGFVNFENADDAA 184
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV+ LNG +DK WYVG+AQK++ERE +L+ +FEQ +K +GANLY+KNLDDSI
Sbjct: 185 RAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQTMKEAADKYQGANLYIKNLDDSI 244
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
D+KLKELF+ FGTITSCKVM D +G S+GSGF AFS P+EA+RAL EMNGKM+ KPLY
Sbjct: 245 GDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALVEMNGKMVVSKPLY 304
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMP 441
VA+AQRKE+R+ARLQAQF+QIR+ + +A +P Y G P +G QQL+YGQ P ++P
Sbjct: 305 VALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYPPGGPGIG-QQLFYGQAPPAMIP 363
Query: 442 PQAAGYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRT----GVRRSGNTHQMQQP 494
Q G+G+QQQ+ PG+RPGG PN+ +P Q Q V+++ M Q
Sbjct: 364 SQ-GGFGYQQQLVPGIRPGGGPMPNFFVPMVQQGQQGQRPGGRRAGAVQQTQQPVPMMQQ 422
Query: 495 QFMRNSNQGIRYLDNARNGTDQSVV----SMVPVPFEVSGMPATPVETPRPVPVPISTLT 550
Q + + RY R D ++ M VP+++ GMP + P+PI L
Sbjct: 423 QMLPRGGRVYRY-PPGRGLPDVAMPGVAGGMFSVPYDMGGMPLR--DAAHSQPIPIGALA 479
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
SALA+A+PD + MLGE LYPLVE +EP +A+KVTGMLLEMDQTEVLHL+ESPEALK KV
Sbjct: 480 SALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQTEVLHLLESPEALKAKV 539
Query: 611 AEAMAVLQ 618
AEAM VL+
Sbjct: 540 AEAMEVLR 547
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 94/191 (49%), Gaps = 19/191 (9%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S + NV +V +L + E L FS+ + S+ V RD +S + +VN+ N DA
Sbjct: 127 SKFNNV--FVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGKSRC-FGFVNFENADDA 183
Query: 83 ANAKEALNFMPINGKPI-----------RIMYSHRDPSIRKSGY-----GNVFIKNLDTS 126
A A + LN ++ K + HR K N++IKNLD S
Sbjct: 184 ARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQTMKEAADKYQGANLYIKNLDDS 243
Query: 127 IDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQV 186
I + L + FA FGT+ SCKV D NG S+G GFV F + A A+ +NG ++ K +
Sbjct: 244 IGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALVEMNGKMVVSKPL 303
Query: 187 YVGLFVRRQER 197
YV L R+++R
Sbjct: 304 YVALAQRKEDR 314
>gi|242096254|ref|XP_002438617.1| hypothetical protein SORBIDRAFT_10g022900 [Sorghum bicolor]
gi|241916840|gb|EER89984.1| hypothetical protein SORBIDRAFT_10g022900 [Sorghum bicolor]
Length = 631
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 322/618 (52%), Positives = 419/618 (67%), Gaps = 35/618 (5%)
Query: 6 AAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSK 65
AA A T A A +P SLYVGDL ++V+E+QL+ +FSQVA +VSVRVCRD
Sbjct: 15 AAVPVAEGTPAAAAVLPPLGSISSLYVGDLAESVDETQLHAVFSQVAPLVSVRVCRDIVS 74
Query: 66 RSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDT 125
SLGY YVN+ + Q+A A EALNF P++GK IR+M+S+RDPS+RKSG N+F+KNL+
Sbjct: 75 GVSLGYGYVNFYSRQEATCALEALNFAPLSGKHIRVMFSNRDPSLRKSGRANLFVKNLEP 134
Query: 126 SIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQ 185
SID+K L + F++FGT+LSCKVA DS GQSKGYGFVQ+E EE+AQ+AI LNGML ND++
Sbjct: 135 SIDSKNLYEMFSSFGTILSCKVATDSAGQSKGYGFVQYETEESAQDAINRLNGMLANDRE 194
Query: 186 VYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK 245
++VGL +RR+ R KFTNVY+ NL +D+DL++ F FG ITSA+VM+D +G
Sbjct: 195 MFVGLHMRRRNR-----EVKFTNVYIKNLPTEFSDDDLRQEFAPFGEITSAVVMRDVNGV 249
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQE-RISRY 304
S+CFGFVNF+ P+ A AV+K NG NDK YVGRAQK+AER+A+L+ KF+QE R +
Sbjct: 250 SKCFGFVNFEKPEFALEAVKKANGKVINDKTLYVGRAQKKAERQAELKTKFKQEDRDKKV 309
Query: 305 EKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEAT 364
+K G NLYLKN+DDSINDE LK LF EFG +TSCKVMVD G SKGSGF F+ E
Sbjct: 310 DKPNGINLYLKNIDDSINDEGLKILFEEFGQVTSCKVMVDAQGRSKGSGFVLFATAEAGH 369
Query: 365 RALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPR 424
A+N MNG+++G+KPLYV +AQ KEER+A L A FAQ SP A
Sbjct: 370 SAINGMNGRIVGKKPLYVGLAQPKEERRAMLMAHFAQRNLAMAASPYA------------ 417
Query: 425 LGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRR 484
GPQQ+Y+G PG +PPQAA +GF Q P + P P +MP+++QR +P QRTG
Sbjct: 418 -GPQQVYFGHPAPGQIPPQAAVFGFPQHFVPAMGPVSP-VMMPHNMQRSRYPRQRTG--- 472
Query: 485 SGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPV 544
++ QQ N+N IRY+ NAR+G + +M+P G P+ V
Sbjct: 473 GPAAYRQQQAMIHANANHNIRYMPNARHG---AYPAMLP-----QGFPSAMVSQQHDG-- 522
Query: 545 PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPE 604
S++T+A+ASA P D+ ++LG +LY LVE +E HA KVTGMLLEMD+ ++L L++SPE
Sbjct: 523 --SSITTAVASAEPADQQQILGNKLYALVEQLEHDHAGKVTGMLLEMDKVKILQLLQSPE 580
Query: 605 ALKTKVAEAMAVLQEAAA 622
L+ KV EAM VLQ A
Sbjct: 581 VLRAKVREAMDVLQRTKA 598
>gi|168018573|ref|XP_001761820.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686875|gb|EDQ73261.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 439
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 288/422 (68%), Positives = 345/422 (81%), Gaps = 1/422 (0%)
Query: 22 PSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQD 81
P+ + + SLYVGDLE NV+E+QLY++FSQV QVVS+RVCRD R SLGY+YVNY+N QD
Sbjct: 18 PTQFVSTSLYVGDLEPNVSEAQLYEMFSQVGQVVSIRVCRDLITRRSLGYSYVNYNNAQD 77
Query: 82 AANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGT 141
A A E LNF +NGKPIRIM+SHRDPSIRKSG N+FIKNLD SIDNKAL DTFAAFG
Sbjct: 78 ATRALELLNFTGVNGKPIRIMFSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFAAFGN 137
Query: 142 VLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQN 201
+LSCKVA D++GQSKGYGFVQFE EE+AQNAI+ +NGML+NDKQV+VG FVRRQER Q
Sbjct: 138 ILSCKVATDASGQSKGYGFVQFEQEESAQNAIEKVNGMLLNDKQVFVGPFVRRQERDQAG 197
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
KF NVYV NLA+ TD++LKK+FG +G I+SA+VM+D+DGKS+CFGFVNF+ PD AA
Sbjct: 198 GVSKFNNVYVKNLADVTTDDELKKVFGAWGPISSAVVMRDNDGKSKCFGFVNFEHPDDAA 257
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AVE L G ++K WYVGRAQK++EREA+LRAKFEQER R EK +G NLYLKNLDD++
Sbjct: 258 KAVEALQGKKFDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYLKNLDDTV 317
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DEK++ELF+E+GTITSCKVM D G SKGSGF AFS P+EATRA+ EMNGKM+G KPLY
Sbjct: 318 DDEKIRELFAEYGTITSCKVMRDHQGQSKGSGFVAFSSPDEATRAVTEMNGKMVGNKPLY 377
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMP 441
VA+AQRKEER+ RLQA FAQ+R G + + + +P YH GAP +GPQ YYGQ PG +P
Sbjct: 378 VALAQRKEERRMRLQAAFAQMRTHVGPA-VPTSLPMYHPGAPGMGPQMSYYGQHPPGPIP 436
Query: 442 PQ 443
Q
Sbjct: 437 LQ 438
>gi|222629159|gb|EEE61291.1| hypothetical protein OsJ_15377 [Oryza sativa Japonica Group]
Length = 613
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 332/615 (53%), Positives = 399/615 (64%), Gaps = 60/615 (9%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDLE +V +SQLY+ F QV+SVRVCRD S G YVN++NP DAA A E
Sbjct: 40 SLYVGDLEASVTDSQLYE-FQPGGQVMSVRVCRDIRLGRSFGKPYVNFNNPVDAARALEL 98
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF P+NGKPIR+MYS+RDPS R+SG N+FIKNLD +ID+K L DTF+AFG +LSCKVA
Sbjct: 99 LNFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAFGNILSCKVA 158
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
D GQSKG+GFVQ++ EAAQ+AIK LNGMLINDK VYVG F+R+QER KF N
Sbjct: 159 TDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQERENSVDKTKFNN 218
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V NL+E+ T EDL KIFG +G ITSA++M DGKSRCFGF+NF+SPD AA AVE+LN
Sbjct: 219 VFVKNLSESTTKEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELN 278
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G NDK WYVGRAQK++ERE +L+ +FEQ +K +G NLY+KNLDDSI D++L E
Sbjct: 279 GKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQLCE 338
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRK 388
LFS +G ITSCK+M D +G SKGSGF AFS EEA++AL EMNGKMI KPLYVA AQRK
Sbjct: 339 LFSNYGKITSCKIMRDANGVSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRK 398
Query: 389 EERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYG 448
E+RKA LQ P G QQ Q PG
Sbjct: 399 EDRKAMLQ--------------------------PGFGFQQ----QLVPG---------- 418
Query: 449 FQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIR 505
+RPGG PNY +P Q Q P R G+RRSG Q Q +
Sbjct: 419 --------MRPGGAHMPNYFVPVVQQGQQGP--RPGIRRSGAGSAQGQQSAQPFQQQMLP 468
Query: 506 YLDNARNGTDQSVVSMVPVPFEVSGMPAT------PVETPRPVPVPISTLTSALASASPD 559
R ++ + P+P GM + PV P PI TLTSALA+A+P+
Sbjct: 469 RGRVYRYPPAHNMPDVPPMPGVAGGMIQSYDMGGFPVRDAGLSPAPIGTLTSALANANPE 528
Query: 560 DRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
+ +LGE LYPLVE +E HA+KVTGMLLEMDQTEVLHL+ESPEALK+KVAEAM VL+
Sbjct: 529 QQRTILGESLYPLVELLEQNHAAKVTGMLLEMDQTEVLHLLESPEALKSKVAEAMDVLRN 588
Query: 620 AAARSDVNEKLGSLA 634
A + + N LA
Sbjct: 589 VAQQHNANTPTSQLA 603
>gi|222635819|gb|EEE65951.1| hypothetical protein OsJ_21832 [Oryza sativa Japonica Group]
Length = 710
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/600 (52%), Positives = 407/600 (67%), Gaps = 30/600 (5%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSK-RSSLGYAYVNYSNPQDAANAKE 87
SLYVGDLE +V E QL LFSQVA V S VCRD + R SLGY YVN+ + +DA A E
Sbjct: 85 SLYVGDLEASVGEDQLVALFSQVAPVASAYVCRDIAGGRKSLGYGYVNFMSREDATRAME 144
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LNF +NGKPIR+M+S+RDP++RKSG NVFIKNL+ +IDNK+L + F++FGT+LS KV
Sbjct: 145 NLNFTVVNGKPIRVMFSNRDPTLRKSGLANVFIKNLEPNIDNKSLYEMFSSFGTILSSKV 204
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A D NG+SKGYGF+QFE+E +A++AI LNGML N ++++VGLF+RRQER + FT
Sbjct: 205 ATDFNGKSKGYGFIQFESESSAKDAINGLNGMLANGQKIFVGLFIRRQEREHTGDANNFT 264
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NVYV NL + +D DL F FG ITSAIVM+D++G SRCFGFVNF+ + A AV+ L
Sbjct: 265 NVYVKNLPKHFSDNDLLNEFSSFGAITSAIVMRDANGLSRCFGFVNFEKSECARNAVKNL 324
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG + D V YV RAQK++ER+A+L+AKFE ++ ++EKL+ NLYLKNLDD INDE L+
Sbjct: 325 NGKSIGDMVLYVARAQKKSERQAELKAKFEHDKNQKFEKLQTVNLYLKNLDDDINDEHLR 384
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
+LF FG + SCKVM+D HG SKG GF +F+ E+A A+ +MNGKM+G+KPLYVAVAQR
Sbjct: 385 KLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILKMNGKMVGKKPLYVAVAQR 444
Query: 388 KEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGY 447
KEERKA L A FA++RA M+P P + P Q +G G P L PP
Sbjct: 445 KEERKAFLAAHFARVRALATMAPTL---------GPNIAPHQFNFGHGVPALFPPPPPAG 495
Query: 448 GFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQ--FMRNSNQGIR 505
Q F PN +MPY++QRQ PGQR+G G + P F +N+NQG R
Sbjct: 496 FGFQPNFV------PNMMMPYNMQRQ--PGQRSGPPHGGMPRHLHNPHQMFHQNANQGFR 547
Query: 506 YLDNARNGTDQSVVSMVPVPFEVSGMPATPVE--TPRPVPV-----PISTLTSALASASP 558
++ N RNG +M+ S P P++ VPV P + L ++LASA+P
Sbjct: 548 HMPNRRNGVANP--AMLHQHHRFSS-PMQPMQQAVKHVVPVGELQAPSNNLQTSLASANP 604
Query: 559 DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
+ + +LG+ L+PLVE + A KVTGMLLE+D+TEVL+L+ESP+ L+ KVAEAM VL+
Sbjct: 605 EQQREILGDMLFPLVEQLVNEKAYKVTGMLLELDKTEVLNLVESPDTLRDKVAEAMKVLE 664
>gi|50725435|dbj|BAD32907.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
Length = 670
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/600 (52%), Positives = 407/600 (67%), Gaps = 30/600 (5%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSK-RSSLGYAYVNYSNPQDAANAKE 87
SLYVGDLE +V E QL LFSQVA V S VCRD + R SLGY YVN+ + +DA A E
Sbjct: 61 SLYVGDLEASVGEDQLVALFSQVAPVASAYVCRDIAGGRKSLGYGYVNFMSREDATRAME 120
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LNF +NGKPIR+M+S+RDP++RKSG NVFIKNL+ +IDNK+L + F++FGT+LS KV
Sbjct: 121 NLNFTVVNGKPIRVMFSNRDPTLRKSGLANVFIKNLEPNIDNKSLYEMFSSFGTILSSKV 180
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A D NG+SKGYGF+QFE+E +A++AI LNGML N ++++VGLF+RRQER + FT
Sbjct: 181 ATDFNGKSKGYGFIQFESESSAKDAINGLNGMLANGQKIFVGLFIRRQEREHTGDANNFT 240
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NVYV NL + +D DL F FG ITSAIVM+D++G SRCFGFVNF+ + A AV+ L
Sbjct: 241 NVYVKNLPKHFSDNDLLNEFSSFGAITSAIVMRDANGLSRCFGFVNFEKSECARNAVKNL 300
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG + D V YV RAQK++ER+A+L+AKFE ++ ++EKL+ NLYLKNLDD INDE L+
Sbjct: 301 NGKSIGDMVLYVARAQKKSERQAELKAKFEHDKNQKFEKLQTVNLYLKNLDDDINDEHLR 360
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
+LF FG + SCKVM+D HG SKG GF +F+ E+A A+ +MNGKM+G+KPLYVAVAQR
Sbjct: 361 KLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILKMNGKMVGKKPLYVAVAQR 420
Query: 388 KEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGY 447
KEERKA L A FA++RA M+P P + P Q +G G P L PP
Sbjct: 421 KEERKAFLAAHFARVRALATMAPTL---------GPNIAPHQFNFGHGVPALFPPPPPAG 471
Query: 448 GFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQ--FMRNSNQGIR 505
Q F PN +MPY++QRQ PGQR+G G + P F +N+NQG R
Sbjct: 472 FGFQPNFV------PNMMMPYNMQRQ--PGQRSGPPHGGMPRHLHNPHQMFHQNANQGFR 523
Query: 506 YLDNARNGTDQSVVSMVPVPFEVSGMPATPVE--TPRPVPV-----PISTLTSALASASP 558
++ N RNG +M+ S P P++ VPV P + L ++LASA+P
Sbjct: 524 HMPNRRNGVANP--AMLHQHHRFSS-PMQPMQQAVKHVVPVGELQAPSNNLQTSLASANP 580
Query: 559 DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
+ + +LG+ L+PLVE + A KVTGMLLE+D+TEVL+L+ESP+ L+ KVAEAM VL+
Sbjct: 581 EQQREILGDMLFPLVEQLVNEKAYKVTGMLLELDKTEVLNLVESPDTLRDKVAEAMKVLE 640
>gi|125555900|gb|EAZ01506.1| hypothetical protein OsI_23538 [Oryza sativa Indica Group]
Length = 669
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/600 (52%), Positives = 407/600 (67%), Gaps = 30/600 (5%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRS-SLGYAYVNYSNPQDAANAKE 87
SLYVGDLE +V E QL LFSQVA V S VCRD + S SLGY YVN+ + +DA A E
Sbjct: 62 SLYVGDLEASVGEDQLVALFSQVAPVASAYVCRDIAGGSKSLGYGYVNFMSREDATRAME 121
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LNF +NGKPIR+M+S+RDP++RKSG NVFIKNL+ +IDNK+L + F++FGT+LS KV
Sbjct: 122 NLNFTVVNGKPIRVMFSNRDPTLRKSGLANVFIKNLEPNIDNKSLYEMFSSFGTILSSKV 181
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A D NG+SKGYGF+QFE+E +A++AI LNGML N ++++VGLF+RRQER + FT
Sbjct: 182 ATDFNGKSKGYGFIQFESESSAKDAINGLNGMLANGQKIFVGLFIRRQEREHTGDANNFT 241
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NVYV NL + +D DL F FG ITSAIVM+D++G SRCFGFVNF+ + A AV+ L
Sbjct: 242 NVYVKNLPKHFSDNDLLNEFSSFGAITSAIVMRDANGLSRCFGFVNFEKSECARNAVKNL 301
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG + D V YV RAQK++ER+A+L+AKFE ++ ++EKL+ NLYLKNLDD INDE L+
Sbjct: 302 NGKSIGDMVLYVARAQKKSERQAELKAKFEHDKNQKFEKLQTVNLYLKNLDDDINDEHLR 361
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
+LF FG + SCKVM+D HG SKG GF +F+ E+A A+ +MNGKM+G+KPLYVAVAQR
Sbjct: 362 KLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILKMNGKMVGKKPLYVAVAQR 421
Query: 388 KEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGY 447
KEERKA L A FA++RA M+P P + P Q +G G P L PP
Sbjct: 422 KEERKAFLAAHFARVRALATMAPTL---------GPNIAPHQFNFGHGVPALFPPPPPAG 472
Query: 448 GFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQ--FMRNSNQGIR 505
Q F PN +MPY++QRQ PGQR+G G + P F +N+NQG R
Sbjct: 473 FGFQPNFV------PNMMMPYNMQRQ--PGQRSGPPHGGMPRHLHNPHQMFHQNANQGFR 524
Query: 506 YLDNARNGTDQSVVSMVPVPFEVSGMPATPVE--TPRPVPV-----PISTLTSALASASP 558
++ N RNG +M+ S P P++ VPV P + L ++LASA+P
Sbjct: 525 HMPNRRNGVANP--AMLHQHHRFSS-PMQPMQQAVKHVVPVGELQAPSNNLQTSLASANP 581
Query: 559 DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
+ + +LG+ L+PLVE + A KVTGMLLE+D+TEVL+L+ESP+ L+ KVAEAM VL+
Sbjct: 582 EQQREILGDMLFPLVEQLVNEKAYKVTGMLLELDKTEVLNLVESPDTLRDKVAEAMKVLE 641
>gi|217074874|gb|ACJ85797.1| unknown [Medicago truncatula]
Length = 494
Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust.
Identities = 286/452 (63%), Positives = 350/452 (77%), Gaps = 7/452 (1%)
Query: 19 AAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSN 78
A VP+ SLYVGDL+ +V +SQLYDLF+Q+ QVVSVR+CRD + + SLGY YVN+SN
Sbjct: 15 APVPNQLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSN 74
Query: 79 PQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAA 138
P DAA A + LNF P+N KPIRIMYSHRDPS+RKSG N+FIKNLD +ID+KAL DTF+
Sbjct: 75 PHDAAKAMDVLNFTPLNNKPIRIMYSHRDPSVRKSGAANIFIKNLDRAIDHKALYDTFSI 134
Query: 139 FGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA 198
FG +LSCK+A+D++G SKGYGFVQFENEE+AQ+AI LNGML+NDK VYVG F R+Q+R
Sbjct: 135 FGNILSCKIAMDASGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVYVGHFQRKQDRD 194
Query: 199 QQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
+ KF NVYV NL+E+VTD+DLK FG +GTITSA+VM+D DGKS+CFGFVNF++ D
Sbjct: 195 NALSNAKFNNVYVKNLSESVTDDDLKNTFGEYGTITSAVVMRDVDGKSKCFGFVNFENAD 254
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
AAA AVE LNG +DK WYVG+A K+ ERE +L+ + EQ +K GANLYLKNLD
Sbjct: 255 AAAEAVEALNGKKFDDKEWYVGKALKKYERELELKERHEQSMKETVDKFYGANLYLKNLD 314
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
DS+ DEKL ELFSEFGT+TSCK++ D G S+GSGF AFS PEEATRAL EMNGKM+ K
Sbjct: 315 DSVTDEKLSELFSEFGTVTSCKILRDPQGISRGSGFVAFSTPEEATRALAEMNGKMVAGK 374
Query: 379 PLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPG 438
PLYVA AQ+KEERKARL AQF+Q+R P M+P+A +P Y G P +G QQ+ YGQ P
Sbjct: 375 PLYVAPAQKKEERKARLPAQFSQVR-PVTMAPIAPRLPFYPAGVPGMG-QQIMYGQAPPA 432
Query: 439 LMPPQAAGYGFQQQVFPGLRPGG---PNYIMP 467
+ AG+G+ QQ+ PG+RPGG PN+ MP
Sbjct: 433 FI--SQAGFGYPQQLVPGMRPGGAPMPNFFMP 462
>gi|302811197|ref|XP_002987288.1| hypothetical protein SELMODRAFT_269256 [Selaginella moellendorffii]
gi|302815025|ref|XP_002989195.1| hypothetical protein SELMODRAFT_269487 [Selaginella moellendorffii]
gi|300143095|gb|EFJ09789.1| hypothetical protein SELMODRAFT_269487 [Selaginella moellendorffii]
gi|300144923|gb|EFJ11603.1| hypothetical protein SELMODRAFT_269256 [Selaginella moellendorffii]
Length = 567
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 319/620 (51%), Positives = 410/620 (66%), Gaps = 71/620 (11%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S + + +LYVGDL+ +VNE+Q++D+F Q+ V+SVR+CRD + SLGYAYVNY+N QDA
Sbjct: 10 SPFASTALYVGDLDPSVNEAQIFDIFKQIGNVMSVRLCRDMVTKRSLGYAYVNYNNTQDA 69
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
+ A E LNFMP+NGKP+RIM+S+RDPSIRKSG GN+F+KNLD SIDNKAL D F+ +G +
Sbjct: 70 SRAIEELNFMPVNGKPVRIMFSYRDPSIRKSGSGNLFVKNLDKSIDNKALHDLFSPYGKI 129
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNV 202
LSCK+A+D + SKG+GFVQF+ E+AA AI+ +NG ++DKQ++VG FVRRQER
Sbjct: 130 LSCKIALDVSNVSKGHGFVQFDTEDAAHTAIEKINGTTLHDKQLFVGPFVRRQERDPP-- 187
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ KF NV+V NL+E TDEDL+K+FG FG I+SA+VMK+ DGKS+CFGFVNF++P+ A
Sbjct: 188 ASKFNNVFVKNLSEITTDEDLQKLFGVFGPISSAVVMKEVDGKSKCFGFVNFENPEDAVK 247
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AVE L+GTT DK YV RAQK+ EREA+L+AKFE ER +K NLYLKNLDD I+
Sbjct: 248 AVEDLHGTTFQDKELYVSRAQKKNEREAELKAKFEHERKDTEDK-SPTNLYLKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DEKLK++FS FG +TSCKVM D G SKGSGF AFS + A RA+ +MNGKMIG KPLYV
Sbjct: 307 DEKLKDMFSAFGNVTSCKVMRDPLGHSKGSGFVAFSTSDAALRAVAQMNGKMIGSKPLYV 366
Query: 383 AVAQRKEERKARLQAQFAQIRAPGGM--SPLASGIPGYHHGAPRLGPQQLYYGQGTPGLM 440
A+AQ+KEERKA+L+AQFA R P PL S + QQL Y + P ++
Sbjct: 367 AMAQKKEERKAKLEAQFAS-RGPVNFPPPPLYSAV-----------GQQLLYSRPAP-MV 413
Query: 441 PPQAAGYGFQQQVFPGLRPG---GPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFM 497
P Q AG+ +RP P + P QRQ G R MQ+
Sbjct: 414 PQQPAGFAM-------VRPNVGQMPGFFPP---QRQ------QGHARVPFQQFMQRESTF 457
Query: 498 RNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASAS 557
SN N S ++++ S LASA+
Sbjct: 458 HGSNSRTPAYGN------NSFLAVL---------------------------ASHLASAT 484
Query: 558 PDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVL 617
P+ + MLGEQLYPLV+ IE HA K+TGMLLEMDQTEVLHL+ESPEAL KV+EAM VL
Sbjct: 485 PEQQRIMLGEQLYPLVDCIEHNHAGKITGMLLEMDQTEVLHLLESPEALNLKVSEAMEVL 544
Query: 618 QEAAARSDVNEKLGSLAVNE 637
+++ R + L SL++++
Sbjct: 545 RDSQQRL-IPPDLASLSLDD 563
>gi|413954516|gb|AFW87165.1| hypothetical protein ZEAMMB73_979278 [Zea mays]
gi|414865260|tpg|DAA43817.1| TPA: hypothetical protein ZEAMMB73_808082 [Zea mays]
Length = 643
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 311/624 (49%), Positives = 408/624 (65%), Gaps = 43/624 (6%)
Query: 7 AAATAAVTSATTAAVPSGYGNV-SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSK 65
AA V T AAV G++ SLYVGDL + V+E QL+ LFSQVA V +VRVCRD
Sbjct: 13 AAEVVPVAEGTPAAVLPPLGSMASLYVGDLAETVDEPQLHALFSQVAPVATVRVCRDILS 72
Query: 66 RSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDT 125
SLGY YVN+ + Q+A A EALNF P+ GK IR+M+S+RDPS+RKSG N+F+KNL+
Sbjct: 73 GVSLGYGYVNFYSRQEATRALEALNFTPLIGKYIRVMFSNRDPSLRKSGRANLFVKNLEP 132
Query: 126 SIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQ 185
+ID+K L + F++FG +LSCKVA DS GQSKGYGFVQ+E EE+A+ AI LNGML N+++
Sbjct: 133 NIDSKNLYEIFSSFGAILSCKVATDSAGQSKGYGFVQYETEESAEAAINGLNGMLANNRK 192
Query: 186 VYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK 245
++VGL +RR++R KFTNVY+ NL +++DL++ F FG ITSA+VM+D+DG
Sbjct: 193 MFVGLHMRRRDREV-----KFTNVYIKNLPTEFSEDDLRQEFAPFGEITSAVVMRDADGA 247
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYE 305
S+CFGFVNF+ P+ A AVEK NG DK YVGRAQK+ ER+A+L+ +F + R ++ +
Sbjct: 248 SKCFGFVNFKKPEFAIEAVEKANGKAIGDKTLYVGRAQKKEERKAELKTRFGRGRDNKVD 307
Query: 306 KLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATR 365
K G NLYLKN+DD INDE LK+LF EFG + SCKVMVD G SKGSGF +F+ E R
Sbjct: 308 KPNGINLYLKNIDDGINDEGLKKLFEEFGQVASCKVMVDARGRSKGSGFVSFATAEAGQR 367
Query: 366 ALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRL 425
A+N MNG+++G+KPLYV +AQ KEERKA L A FAQ S A
Sbjct: 368 AINRMNGRIVGKKPLYVGLAQPKEERKAMLMAHFAQRNLAMAASQYA------------- 414
Query: 426 GPQQLYYGQ-GTPG-LMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVR 483
GPQQ+Y+G +PG + PPQ A +GF Q PG+ P P + P+++QR +PG
Sbjct: 415 GPQQVYFGHPSSPGPIAPPQGAVFGFPQHFVPGMGPISPVMMPPHNMQRPRYPGP----- 469
Query: 484 RSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVP 543
++ QQ N+N ++ NAR G +M P F +G A
Sbjct: 470 ---APYRQQQAMIHANAN----HMPNARPG---PYPAMPPQAFPGAGATAWQQHA----- 514
Query: 544 VPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESP 603
+S T+A+ASA P D+ ++LG +LY LVE +E HA KVTGMLLEMD+ E+L L+ SP
Sbjct: 515 --VSRTTTAVASAGPADQHQILGNKLYALVEQLERDHAGKVTGMLLEMDKAEILQLLRSP 572
Query: 604 EALKTKVAEAMAVLQEAAARSDVN 627
EAL+ KV EAMAVLQ A V+
Sbjct: 573 EALRAKVREAMAVLQRTKAGGSVD 596
>gi|303272375|ref|XP_003055549.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463523|gb|EEH60801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 606
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 320/599 (53%), Positives = 400/599 (66%), Gaps = 56/599 (9%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLY GDL+ + E+QLY+LFS + VVS+RVCRD R SLGYAYVN+ DAA A +
Sbjct: 32 TSLYCGDLDPSCTEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFQQGNDAARAID 91
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
ALNF +NGKPIRIMYS RDP++RKSG GN+FIKNLD IDNKAL DTFA FG ++S KV
Sbjct: 92 ALNFQVVNGKPIRIMYSQRDPALRKSGVGNIFIKNLDKEIDNKALYDTFAQFGNIVSAKV 151
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A D GQSKGYGFVQF+ EE AQ+AI+ +NGML+NDKQVYVG F +R ER + F
Sbjct: 152 ATDLQGQSKGYGFVQFDTEEGAQSAIEKVNGMLLNDKQVYVGPFQKRNERGGGPTT--FN 209
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NVYV NL E+VT+E L+++F FG +TS +VMKD++GKS+ FGFV ++ +AA +VE+L
Sbjct: 210 NVYVKNLHESVTEEKLREVFEKFGALTSVVVMKDAEGKSKGFGFVCYEDAEAAGKSVEEL 269
Query: 268 NGTTN-NDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
+G DK W V RAQK++EREA+L+AKF+ ER R EK+ GANLY+KNL+D+++D KL
Sbjct: 270 DGYDKIEDKAWVVCRAQKKSEREAELKAKFDAERRERMEKMAGANLYIKNLEDTVDDAKL 329
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
+ELF+EFGTITSC+VM D G S+GS F AFS +EATRA+ EMNGKM G+KPLYVA+AQ
Sbjct: 330 RELFAEFGTITSCRVMRDTAGASRGSAFVAFSSADEATRAVTEMNGKMAGQKPLYVALAQ 389
Query: 387 RKEERKARLQAQFAQIR-APGGMSPLAS-GIPGYHHGAPRLGPQQLYYGQGTPGLM-PPQ 443
RKE+R+ RLQAQFAQ + A GGM + G+P GAP +YYGQ PG+M PPQ
Sbjct: 390 RKEDRRLRLQAQFAQRQVAAGGMPNMGPYGMP--PPGAP------MYYGQPPPGVMGPPQ 441
Query: 444 -AAGYGFQQQVFPGLRPGGP-----------NYIMPYHLQRQVHPGQRTGVRRSGNTHQM 491
GYGFQ PG+ PG P Y+MP + R G G
Sbjct: 442 PQPGYGFQ----PGMPPGVPGRPMGPGGPNMQYVMPMPQRGPPGQRGRGGRGGPGGGRGG 497
Query: 492 QQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTS 551
+ Q MR NQG E+ P P E PV S L +
Sbjct: 498 RGQQGMRFPNQGR----------------------EMPPAPLPPGEPQDPV----SLLAA 531
Query: 552 ALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
L +A+PD + +LGE LYPLV+ +EP ++K+TGMLLEMD +EVLHLIESPEAL+ KV
Sbjct: 532 QLPTATPDQQRMLLGEALYPLVDAVEPASSAKITGMLLEMDHSEVLHLIESPEALRAKV 590
>gi|34015145|gb|AAQ56342.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|125561054|gb|EAZ06502.1| hypothetical protein OsI_28747 [Oryza sativa Indica Group]
gi|125602953|gb|EAZ42278.1| hypothetical protein OsJ_26851 [Oryza sativa Japonica Group]
Length = 456
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 278/417 (66%), Positives = 334/417 (80%), Gaps = 4/417 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL+ +V ++QL+D+FSQV VVSVRVCRD + R SLGYAYVN+S+P DAA A E
Sbjct: 40 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEM 99
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF PINGKPIRIMYS+RDPS RKSG N+FIKNLD SIDNKAL DTF+ FG +LSCKVA
Sbjct: 100 LNFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKVA 159
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
+ +G+SKGYGFVQFE EEAAQNAI LNGML+NDK+VYVG FVR+QER + +PKF N
Sbjct: 160 TEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERENVSGNPKFNN 219
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
VYV NL+E+ T+++LK+IFG FG ITS +VM++ DGKSRCFGFVNF++PD AA AVE LN
Sbjct: 220 VYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLN 279
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI-NDEKLK 327
G +DK WYV RAQK++ERE +L+ KFE+ +K +G NLYLKNLDDSI +DEKLK
Sbjct: 280 GKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEKLK 339
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
E+F++FGTITSCKVM D +G SKGSGF AF E+A+RAL MNGKMIG KPLYVA+AQR
Sbjct: 340 EIFADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQR 399
Query: 388 KEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQ 443
KEER+ARLQAQF+Q+R P M P +A +P Y G P +G QQL+YGQ P + PQ
Sbjct: 400 KEERRARLQAQFSQMR-PMVMPPSVAPRMPMYPPGVPGVG-QQLFYGQPPPAFVNPQ 454
>gi|412991277|emb|CCO16122.1| predicted protein [Bathycoccus prasinos]
Length = 620
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 312/589 (52%), Positives = 386/589 (65%), Gaps = 24/589 (4%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
N SLYVGDLE + E+QLY+LFS + VVS+RVCRD R SLGYAYVN+S QDAA A
Sbjct: 42 NTSLYVGDLESSATEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFSQAQDAARAI 101
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
+ LNF +NGKPIRI+YS RDP+IRKSG GN+FIKNLD ID AL DTFA FG ++S K
Sbjct: 102 DVLNFQVVNGKPIRILYSQRDPTIRKSGVGNIFIKNLDKDIDTVALRDTFAQFGNIVSAK 161
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF 206
VA D G SKGYGF+QF+ E AA+ AI+ +NGM +NDK VYVG F RR ER KF
Sbjct: 162 VATDGQGNSKGYGFIQFDTEAAAKEAIEKVNGMELNDKVVYVGPFQRRAERG--TTETKF 219
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
NV+V NL + VTDE+L+K+F FG +TS ++ KD DGKS+ FGFV +++P+ A+ AVE+
Sbjct: 220 NNVFVKNLGDEVTDEELRKVFEGFGPVTSVMISKDEDGKSKGFGFVCYETPEDASKAVEE 279
Query: 267 LNGTT-NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
L+G DK W V RAQK+AEREA+L+AKFE ER R EK+ GANLY+KNL+D +DE
Sbjct: 280 LDGKHGEEDKKWVVCRAQKKAEREAELKAKFEAERRERMEKMAGANLYIKNLEDGADDET 339
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L+ELF EFGTITSC+VM D G S+GS F AFS PEEATRA+ E+NGKM+G KPLYVA+A
Sbjct: 340 LRELFKEFGTITSCRVMRDASGVSRGSAFVAFSSPEEATRAVTELNGKMVGAKPLYVALA 399
Query: 386 QRKEERKARLQAQFAQ-IRAPGG-MSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQ 443
QRKE+R+ RLQAQFAQ PGG M+P+ P G G G
Sbjct: 400 QRKEDRRMRLQAQFAQRSMGPGGVMAPMYGMPPPGVPGGGMPGMYYGQPPPGMMPPQ--P 457
Query: 444 AAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQG 503
G+GFQ PG+ PGGP + Y++ PG +R G + G
Sbjct: 458 QPGFGFQ----PGM-PGGPRPMPGYNM-----PGVPNMMRGPGGMGGRGGRGRGQPGMGG 507
Query: 504 IRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTR 563
N R Q M P+P + A P E P PI+ + S L +A+PD +
Sbjct: 508 RGGPQNGRQNFRQQ-QPMPPMPGQ-----AAP-EPPAAESNPIALIVSQLGTATPDQQRM 560
Query: 564 MLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAE 612
+LGE LYPLV+ ++ +A+KVTGMLLEMDQ EVLHLIES +ALK KV E
Sbjct: 561 ILGEALYPLVDAVDSANAAKVTGMLLEMDQAEVLHLIESADALKAKVQE 609
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 274/408 (67%), Positives = 322/408 (78%), Gaps = 4/408 (0%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDLE NV +SQLY+LFSQ QVVSVRVCRD + R SLGYAYVNYSNP DAA A E
Sbjct: 122 TSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAME 181
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
ALNF P+N KPIR+MYS+RDPS R+SG N+FIKNLD +IDNK L DTF+AFG +LSCKV
Sbjct: 182 ALNFAPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKV 241
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A+D GQSKG+GFVQ+E EE+AQ+A+K LNGMLINDK VYVG F+R+QER + KF
Sbjct: 242 AMDDIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYVGPFLRKQERDNSSDKAKFN 301
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NV+V NL+E+ T EDL K+F +GTITSA+VM DGKSRCFGFVNF+SPD AA AVE+L
Sbjct: 302 NVFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKSRCFGFVNFESPDDAARAVEEL 361
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG NDK WYVGRAQK++ERE DL+ +FEQ +K +G NLYLKNLDD I D++L+
Sbjct: 362 NGKKINDKEWYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGITDDQLR 421
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
ELFS FG ITSCK+M DQ+G SKGSGF +FS EEA++AL EMNGKMI KPLYVA AQR
Sbjct: 422 ELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMNGKMISGKPLYVAFAQR 481
Query: 388 KEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQ 434
KEERKA LQAQF+Q+R P M+P + +P Y P LG QQL+YGQ
Sbjct: 482 KEERKAMLQAQFSQMR-PVPMTPSMTPRLPMYPP-MPTLG-QQLFYGQ 526
>gi|357117760|ref|XP_003560630.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
5-like [Brachypodium distachyon]
Length = 654
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 302/611 (49%), Positives = 399/611 (65%), Gaps = 36/611 (5%)
Query: 22 PSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQD 81
PS +VS+YVG+LE +V E QL DLFSQ VVSVR+C D+ SLGYAYVN+ + +D
Sbjct: 25 PSFGSSVSVYVGNLEASVTEQQLLDLFSQAVPVVSVRICDDKVTGRSLGYAYVNFHSHED 84
Query: 82 AANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGT 141
A A E NF +NGK IR+M+S+RDP++R+SG N+FIKNL+ +I K+L F+ FG
Sbjct: 85 AKVALEYFNFTVVNGKSIRVMFSNRDPTLRRSGAANLFIKNLEPNIVAKSLHQMFSRFGI 144
Query: 142 VLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND--KQVYVGLFVRRQERAQ 199
+LSCKVA D NG+SKGYGFVQF +EE+A++A+ LNG L N KQ+YV LF+RR+ER
Sbjct: 145 ILSCKVATDLNGKSKGYGFVQFVSEESAKDAMNALNGKLANGNGKQLYVDLFIRREERQH 204
Query: 200 QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDA 259
+ KFTNVY NL + TD+DL ++F FGTITSA+VMKD DG+S+CFGFVN++ +
Sbjct: 205 IGGASKFTNVYTKNLPKEFTDDDLCRVFAPFGTITSAVVMKDGDGESKCFGFVNYEKTEY 264
Query: 260 AAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDD 319
A AVEKLNG +D YVGRA+++ ER+A+L+ KF++ER + K KG NLYLKNLD
Sbjct: 265 AEEAVEKLNGKIISDVALYVGRAKRKQERQAELKEKFDKERNDKIRKSKGCNLYLKNLDC 324
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNG-KMIGRK 378
SI+DE L+ LF F I +CKVMVD G SKG GF F+ E A +A++ N K++G K
Sbjct: 325 SIDDEYLRNLFGRFDDIGTCKVMVDSEGRSKGFGFVLFTTIEAANKAVSXRNERKLVGTK 384
Query: 379 PLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPG 438
LYV VAQRKEER A L AQFA+ G +P +P + P+ Y+G G PG
Sbjct: 385 LLYVCVAQRKEERSAILAAQFARRHMVGARTP---AMPQ------NIAPRPFYFGYGVPG 435
Query: 439 -LMPPQAAGYGFQQQ---VFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQP 494
L+ PQA G+G+QQ V PGL PG P+ +MPYH+ R +H HQ QQ
Sbjct: 436 VLVRPQATGFGYQQYPQPVIPGLNPGAPSLMMPYHMLRPIH-------------HQPQQQ 482
Query: 495 QF-MRNSNQGIRYLDNARNGTDQSVVS-----MVPVPFEVSGMPATPVETPRPVPVP-IS 547
+ N NQ +RY+ NA NG S ++ + PV ++S + + V P P I
Sbjct: 483 MAQLPNWNQIVRYMPNACNGPTNSAMAPQMDFVAPVVPQISVLTDSVVTAPSISEEPSID 542
Query: 548 TLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALK 607
+L +ALASA P+ + +LGE+L PLV +EP HA KVT MLLE+++ VL LIES E L+
Sbjct: 543 SLATALASAEPEKQHLILGERLQPLVAQLEPEHAGKVTEMLLELEKAVVLELIESAENLQ 602
Query: 608 TKVAEAMAVLQ 618
KV +AM L+
Sbjct: 603 EKVNQAMESLR 613
>gi|413918857|gb|AFW58789.1| hypothetical protein ZEAMMB73_983608 [Zea mays]
Length = 412
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 257/392 (65%), Positives = 301/392 (76%)
Query: 5 GAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQS 64
G A AV S V SLYVGDLE V++SQLY+LFSQ QVVSVRVCRD +
Sbjct: 11 GGPGAVPAVVSPGAVGVAQPLPTTSLYVGDLEGAVSDSQLYELFSQAGQVVSVRVCRDVT 70
Query: 65 KRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLD 124
R SLGYAYVNYSNP DAA A E LNF +N KPIR+MYS+RDPS R+SG N+FIKNLD
Sbjct: 71 SRRSLGYAYVNYSNPLDAARALEVLNFAALNNKPIRVMYSNRDPSSRRSGSANIFIKNLD 130
Query: 125 TSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDK 184
+IDNK L +TF++FGT+LSCKVA+D GQSKG+GFVQ++ EEAAQNAIK LNGMLINDK
Sbjct: 131 KTIDNKTLHETFSSFGTILSCKVAVDEAGQSKGFGFVQYDKEEAAQNAIKSLNGMLINDK 190
Query: 185 QVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG 244
V+VG FVR+QER KF NV+V NL+E+ T EDL KIFG +G ITSA+VM DG
Sbjct: 191 PVFVGPFVRKQERDHSFDKTKFNNVFVKNLSESTTKEDLLKIFGEYGDITSAVVMIGMDG 250
Query: 245 KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRY 304
KSRCFGF+NF++PDAA+ AV++LNG NDK WYVGRAQK++ERE +L+ +FEQ
Sbjct: 251 KSRCFGFINFENPDAASHAVQELNGKKINDKEWYVGRAQKKSEREMELKRRFEQSLKDAA 310
Query: 305 EKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEAT 364
+K +G NLYLKNLDDSI D++L ELFS FG ITS KVM DQ+G SKGSGF AFS EEA+
Sbjct: 311 DKYQGLNLYLKNLDDSIGDDQLCELFSNFGKITSYKVMRDQNGLSKGSGFVAFSTREEAS 370
Query: 365 RALNEMNGKMIGRKPLYVAVAQRKEERKARLQ 396
+AL EMNGKMI KPLYVA AQRKE+RKA LQ
Sbjct: 371 QALTEMNGKMISGKPLYVAFAQRKEDRKAMLQ 402
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 162/286 (56%), Gaps = 17/286 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L+ ++ + L + F+ G V+S +V D ++ +S GY +V + N A A+++
Sbjct: 35 SLYVGDLEGAVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNYSNPLDAARALEV 94
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN +N+K + V ++ R ++++ S N+++ NL +T+ ++ L + F FGTI S
Sbjct: 95 LNFAALNNKPIRV-MYSNRDPSSRRSGS---ANIFIKNLDKTIDNKTLHETFSSFGTILS 150
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V D G+S+ FGFV + +AA A++ LNG NDK +VG ++
Sbjct: 151 CKVAVDEAGQSKGFGFVQYDKEEAAQNAIKSLNGMLINDKPVFVGPFVRK---------- 200
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
QER ++K K N+++KNL +S E L ++F E+G ITS VM+ G S+ GF
Sbjct: 201 --QERDHSFDKTKFNNVFVKNLSESTTKEDLLKIFGEYGDITSAVVMIGMDGKSRCFGFI 258
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ 401
F P+ A+ A+ E+NGK I K YV AQ+K ER+ L+ +F Q
Sbjct: 259 NFENPDAASHAVQELNGKKINDKEWYVGRAQKKSEREMELKRRFEQ 304
>gi|348552998|ref|XP_003462314.1| PREDICTED: polyadenylate-binding protein 4-like isoform 3 [Cavia
porcellus]
Length = 615
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 303/653 (46%), Positives = 403/653 (61%), Gaps = 82/653 (12%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE+LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG N K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ 434
+G KPLYVA+AQRKEERKA L Q+ Q R G + A+ I + P G G
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ-RVAGMRALPANAI--LNQFQPAAG------GY 408
Query: 435 GTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQP 494
P + PQA G RP PY+ P Q +R + Q +P
Sbjct: 409 FVPAV--PQAQG-----------RP-------PYYT-----PNQLAQMRPNPRWQQGGRP 443
Query: 495 QFMRNSNQGIRYLDNARNGTDQSVVSMVP--VPFEVSGMP------------------AT 534
Q + IR ++G ++ + P VP V + A+
Sbjct: 444 QGFQGMPSAIR-----QSGPRPTLRHLAPTGVPTAVPNLAPRAAVAAAAPRAVAPYKYAS 498
Query: 535 PVETPRPVPVPIST------------LT-SALASASPDDRTRMLGEQLYPLVENIEPVHA 581
V +P P P+ LT S LA+A P ++ +MLGE+L+PL++ + A
Sbjct: 499 SVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLA 558
Query: 582 SKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 559 GKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 611
>gi|148229527|ref|NP_001085857.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Xenopus
laevis]
gi|49118872|gb|AAH73435.1| MGC80927 protein [Xenopus laevis]
Length = 626
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 307/648 (47%), Positives = 400/648 (61%), Gaps = 72/648 (11%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 6 SSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AFG +
Sbjct: 66 ERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNI 125
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKV D NG SKGY FV FE ++AA AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 126 LSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKCRREREAELG 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +FTNVY+ N E + DE LK+ F +G S VM D GKS+ FGFV+F+ + A
Sbjct: 185 AKAKEFTNVYIKNFGEDMDDERLKETFSKYGKTLSVKVMTDPSGKSKGFGFVSFERHEDA 244
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNL 317
AV+ +NG N K+ +VGRAQK+ ER+A+L+ +FE QERISRY+ G NLY+KNL
Sbjct: 245 NKAVDDMNGKDVNGKIMFVGRAQKKVERQAELKRRFEQLKQERISRYQ---GVNLYIKNL 301
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
DD+I+DEKL++ FS FG+ITS KVM+++ G SKG GF FS PEEAT+A+ EMNG+++G
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLEE-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 378 KPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGI--------PG--YHHGAPRLGP 427
KPLYVA+AQRKEERKA L Q+ Q A GM L + PG + P+
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRIA--GMRALPANTLINQFQPAPGGYFVPAVPQTQS 418
Query: 428 QQLYYGQGTPGLMPPQAAGYGFQQQVFP-GLRPGGPNYIMPYHLQRQVHPGQRTGVRRSG 486
+ YY P M G +QQ P G +P MP L+ H G R +R
Sbjct: 419 RPTYYA---PNHMAQIRPGPRWQQTGRPQGFQP------MPNTLR---HSGPRQSLRH-- 464
Query: 487 NTHQMQQPQFMRNSN-QGIRYLDNA--RNGTDQSVVSM-------------VPVPFEVSG 530
M SN QG R + R G S +M VP P++ +
Sbjct: 465 ----------MPPSNAQGTRGIPGVTQRVGVSSSTQTMGPRPPVSAPPPRAVP-PYKYTR 513
Query: 531 MPATPVETPRPVPVPISTL-------TSALASASPDDRTRMLGEQLYPLVENIEPVHASK 583
P PV P P P + S LASA P ++ +MLGE+L+PL++ + P A K
Sbjct: 514 CP-LPVVQPLQAPQPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPSLAGK 572
Query: 584 VTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLG 631
+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ D +K+G
Sbjct: 573 ITGMLLEIDNSELLHMLESPESLRSKVEEAVAVLQAHQAKKDAAQKVG 620
>gi|332374002|gb|AEE62142.1| unknown [Dendroctonus ponderosae]
Length = 634
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 291/622 (46%), Positives = 396/622 (63%), Gaps = 24/622 (3%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ L+D FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHSDITEAMLFDKFSSAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD SIDNKA+ DTF+AFG +LS
Sbjct: 68 ALDTMNFDLIRGRPIRIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKVA D NG SKGYGFV FE EEAA +I+ +NGML+N K+VYVG F+ R+ER ++
Sbjct: 128 CKVAQDENGTSKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEK 187
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ FTNVYV N E +++E L+ +F FG ITS VM DGKS+ FGFV F+SP+AA
Sbjct: 188 AKLFTNVYVKNFGEDLSEEQLRNMFEKFGKITSYKVMSKDDGKSKGFGFVAFESPEAAET 247
Query: 263 AVEKLNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV+ LNG + K YVGRAQK+AER+ +L+ +FE ++ R + +G NLY+KNLDD+I
Sbjct: 248 AVDALNGKELVEGKPLYVGRAQKKAERQQELKRRFEALKMERLNRYQGVNLYVKNLDDTI 307
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGF-------SKGSGFAAFSMPEEATRALNEMNGKM 374
+DE+L++ F+ FGTITS KVM++++ SKG GF FS PEEAT+A+ EMNG++
Sbjct: 308 DDERLRKEFAPFGTITSAKVMIEENKTESFITTRSKGFGFVCFSSPEEATKAVTEMNGRI 367
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGI--PG-YHHGAPRLGPQQLY 431
+G KPLYVA+AQRKE+RKA L +Q+ Q A M + PG + P + Q Y
Sbjct: 368 VGSKPLYVALAQRKEDRKAHLTSQYMQRMANMRMHQMGHQFMPPGPSSYFVPTIPTAQRY 427
Query: 432 YGQGTPGLMPPQA-AGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRS---GN 487
+ GT L P ++ + Q + PG + G Y+ + P Q +R + GN
Sbjct: 428 FTGGT-QLTPIRSNPRWAAQTPIRPGAQGGTAAYMANSYRPSARPPNQPMAMRNNIGLGN 486
Query: 488 THQM---QQPQFMRN---SNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRP 541
+ QQP M+ + Q + +R T + +M P + MPATPV+
Sbjct: 487 VPRPITGQQPPNMQGRPLAGQQVVVATGSRAATFKYTSNMRNPPQAMGTMPATPVQQAVH 546
Query: 542 VPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIE 601
+ + LA+A P ++ +MLGE+L+PL++ + A K+TGMLLE+D TE+LH++E
Sbjct: 547 IQGQEPLTATMLAAAQPQEQKQMLGERLFPLIQRMYADLAGKITGMLLEIDNTELLHMLE 606
Query: 602 SPEALKTKVAEAMAVLQEAAAR 623
E+LK KV EA+AVLQ A+
Sbjct: 607 HNESLKNKVEEAVAVLQAHQAK 628
>gi|119627670|gb|EAX07265.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_e [Homo sapiens]
Length = 615
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 302/653 (46%), Positives = 403/653 (61%), Gaps = 82/653 (12%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D +GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ 434
+G KPLYVA+AQRKEERKA L Q+ Q R G + A+ I + P G G
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ-RVAGMRALPANAI--LNQFQPAAG------GY 408
Query: 435 GTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQP 494
P + PQA G RP PY+ P Q +R + Q +P
Sbjct: 409 FVPAV--PQAQG-----------RP-------PYYT-----PNQLAQMRPNPRWQQGGRP 443
Query: 495 QFMRNSNQGIRYLDNARNGTDQSVVSMVP--VPFEVSGMP------------------AT 534
Q + IR ++G ++ + P VP V + A+
Sbjct: 444 QGFQGMPSAIR-----QSGPRPTLRHLAPTGVPTAVQNLAPRAAVAAAAPRAVAPYKYAS 498
Query: 535 PVETPRPVPVPIST------------LT-SALASASPDDRTRMLGEQLYPLVENIEPVHA 581
V +P P P+ LT S LA+A P ++ +MLGE+L+PL++ + A
Sbjct: 499 SVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLA 558
Query: 582 SKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 559 GKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 611
>gi|426215230|ref|XP_004001877.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Ovis aries]
Length = 631
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 303/658 (46%), Positives = 399/658 (60%), Gaps = 76/658 (11%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE+LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ 434
+G KPLYVA+AQRKEERKA L Q+ Q R G + A+ I + P G G
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ-RVAGMRALPANAI--LNQFQPAAG------GY 408
Query: 435 GTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ-Q 493
P + PQA G P Y P L Q+ P R ++ G Q
Sbjct: 409 FVPAV--PQAQGR--------------PPYYTPNQLA-QIRPNPRW--QQGGRPQGFQGM 449
Query: 494 PQFMRNS--NQGIRYLDNARNGTDQ----SVVSMVPVPFEVSGMP--------------- 532
P +R S +R+L N + V VP V +
Sbjct: 450 PSAIRQSGPRPALRHLAPTGNAPASRGLPTTAQRVGVPTAVQNLAPRAAVAAAAPRAVAP 509
Query: 533 ---ATPVETPRPVPVPIST-------------LTSALASASPDDRTRMLGEQLYPLVENI 576
A+ V +P P P+ S LA+A P ++ +MLGE+L+PL++ +
Sbjct: 510 YKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTM 569
Query: 577 EPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 570 HSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 627
>gi|302755232|ref|XP_002961040.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
gi|300171979|gb|EFJ38579.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
Length = 625
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 298/616 (48%), Positives = 395/616 (64%), Gaps = 55/616 (8%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
VSLYVGDL++ V E+QL+ +FSQ+ V SVRVCRD R SLGY YVNYS+ DA A E
Sbjct: 37 VSLYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAME 96
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
ALN+ PINGK IRIM+SHRDPS RKSG GN+FIKNLD SIDNKAL DTF AFG +LSCK+
Sbjct: 97 ALNYTPINGKTIRIMWSHRDPSTRKSGVGNIFIKNLDESIDNKALHDTFIAFGPILSCKI 156
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A +G+SKGYGFV FE +EAA AI+ +NGM + K+V+V FV+R +R KFT
Sbjct: 157 A-HQDGRSKGYGFVHFETDEAANLAIEKVNGMQLVGKKVFVAKFVKRSDRLAATGETKFT 215
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NV+V NL + +E++ + F FG IT+ ++MKD + KS+ FGFVNF P+AA AAVE +
Sbjct: 216 NVFVKNLDPEMAEEEINEHFSTFGVITNVVIMKDENDKSKGFGFVNFDDPEAARAAVETM 275
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
N + + YVGRAQK+AERE LR +FE++R+ +++K +GANLY+KNLDDSI+DE LK
Sbjct: 276 NNSQLGSRTIYVGRAQKKAEREQILRRQFEEKRMEQFQKYQGANLYVKNLDDSIDDETLK 335
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
+ FS +G ITS KVM D+ G SKG GF F+ PEEA+RA E NG MI KP+YVA+AQR
Sbjct: 336 QEFSRYGNITSAKVMRDEKGISKGFGFVCFTSPEEASRAATETNGLMINGKPIYVAMAQR 395
Query: 388 KEERKARLQAQFAQIRAPGGMSP----LASGIPGYHHGAPRLGPQQLYYGQGTPGLMP-- 441
KE R+A+LQ Q R G M P +A+ P ++ AP P L+P
Sbjct: 396 KEIRQAQLQQQ-YAQRMSGLMPPPGAQVAAAYPPVYYAAP-------------PALLPQV 441
Query: 442 PQAAGYGFQQQVFPGLR------PGGPNY--IMPYHLQRQVHPGQRTGVRRSGNTH---Q 490
PQ G +Q + PG R PG P+ + PY L R + GV S +++
Sbjct: 442 PQRQGLMYQPVMRPGWRTGPLAPPGRPSLQPLPPYALVR-----NKKGVPLSISSYIVGV 496
Query: 491 MQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLT 550
MQQ Q ++Y++N R P +G P V P +P+ + +
Sbjct: 497 MQQ-----RPRQAMKYVNNGR-----------PRDGAAAGGPVLMV--PGNMPMGGNDVL 538
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
S +++ASP + ++LGE+L+PLV + A K+TGMLLEMD +E+L L+E+PEAL +KV
Sbjct: 539 SMMSAASPQQQKQLLGERLFPLVRTHQFDLAGKITGMLLEMDNSELLVLLETPEALASKV 598
Query: 611 AEAMAVLQEAAARSDV 626
EA+ VLQ+ + S V
Sbjct: 599 DEAVQVLQQHSKASTV 614
>gi|348553000|ref|XP_003462315.1| PREDICTED: polyadenylate-binding protein 4-like isoform 4 [Cavia
porcellus]
Length = 631
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 305/658 (46%), Positives = 402/658 (61%), Gaps = 76/658 (11%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE+LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG N K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ 434
+G KPLYVA+AQRKEERKA L Q+ Q R G + A+ I + P G G
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ-RVAGMRALPANAI--LNQFQPAAG------GY 408
Query: 435 GTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ-Q 493
P + PQA G P Y P L Q+ P R ++ G Q
Sbjct: 409 FVPAV--PQAQGR--------------PPYYTPNQLA-QMRPNPRW--QQGGRPQGFQGM 449
Query: 494 PQFMRNS--NQGIRYLDNARNGTDQ----SVVSMVPVPFEVSGMP--------------- 532
P +R S +R+L N + V VP V +
Sbjct: 450 PSAIRQSGPRPTLRHLAPTGNAPASRGLPTTTQRVGVPTAVPNLAPRAAVAAAAPRAVAP 509
Query: 533 ---ATPVETPRPVPVPIST------------LT-SALASASPDDRTRMLGEQLYPLVENI 576
A+ V +P P P+ LT S LA+A P ++ +MLGE+L+PL++ +
Sbjct: 510 YKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTM 569
Query: 577 EPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 570 HSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 627
>gi|41152034|ref|NP_958453.1| polyadenylate-binding protein 4 [Danio rerio]
gi|31419252|gb|AAH53126.1| Poly(A) binding protein, cytoplasmic 4 (inducible form) [Danio
rerio]
Length = 637
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 302/646 (46%), Positives = 398/646 (61%), Gaps = 54/646 (8%)
Query: 19 AAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSN 78
AA Y SLYVGDL ++ E+ LY+ FS V+S+RVCRD R SLGYAYVN+
Sbjct: 3 AATAGSYPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 62
Query: 79 PQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAA 138
P DA A + +NF + GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+A
Sbjct: 63 PADAERALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSA 122
Query: 139 FGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER- 197
FG +LSCKV D NG SKGY FV FE ++AA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 FGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKERE 181
Query: 198 AQQNVSPK-FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQS 256
A+ K FTNVY+ N + + D+ LK++F +G S VM D GKSR FGFV+++
Sbjct: 182 AEMGAKAKEFTNVYIKNFGDDMDDQRLKELFDKYGKTLSVKVMTDPTGKSRGFGFVSYEK 241
Query: 257 PDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLY 313
+ A AVE++NGT N K +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY
Sbjct: 242 HEDANKAVEEMNGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERISRYQ---GVNLY 298
Query: 314 LKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGK 373
+KNLDD+I+DEKL++ FS FG+ITS KVM+++ G SKG GF FS PEEAT+A+ EMNG+
Sbjct: 299 IKNLDDTIDDEKLRKEFSPFGSITSAKVMLEE-GRSKGFGFVCFSSPEEATKAVTEMNGR 357
Query: 374 MIGRKPLYVAVAQRKEERKARLQAQFAQ----IRA-----------PGGMSPLASGIPGY 418
++G KPLYVA+AQRKEERKA L Q+ Q +RA P G +P
Sbjct: 358 IVGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRAMPANAIINQFQPAG-GYFMPAVPQA 416
Query: 419 HHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGP----NYIMPYHLQRQV 474
+ P QL + P G G Q + LR GP ++ P + Q
Sbjct: 417 QNRTTYYAPNQLTQMRPNPRWQQQGGRGQGGFQGMPSSLRQPGPRANIRHLAP-NASNQG 475
Query: 475 HPGQRTGVRRSGNTHQ---------MQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVP 525
G TG +R G T Q M P+ M +Y RN Q V P+
Sbjct: 476 PRGMPTGAQRVGGTGQPMGPRPAMGMTTPRAM----PPYKYASTIRNTQPQVV---QPIA 528
Query: 526 FEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVT 585
+ PA V+ P+ S LA+A P ++ +MLGE+L+PL++ + P A K+T
Sbjct: 529 LQ-QAQPAVHVQGQEPL------TASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKIT 581
Query: 586 GMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLG 631
GMLLE+D +E+LH++ES E+L++KV EA+AVLQ A+ D +K+G
Sbjct: 582 GMLLEIDNSELLHMLESHESLRSKVEEAVAVLQAHQAKKDATQKVG 627
>gi|403292062|ref|XP_003937076.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 630
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 302/657 (45%), Positives = 400/657 (60%), Gaps = 75/657 (11%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D +GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ 434
+G KPLYVA+AQRKEERKA L Q+ Q R G + A+ I + P G G
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ-RVAGMRALPANAI--LNQFQPAAG------GY 408
Query: 435 GTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ-Q 493
P + PQA G P Y P L Q+ P R ++ G Q
Sbjct: 409 FVPAV--PQAQGR--------------PPYYTPNQLA-QMRPNPRW--QQGGRPQGFQGM 449
Query: 494 PQFMRNS--NQGIRYLDNARNGTDQ----SVVSMVPVPFEVSGMP--------------- 532
P +R S +R+L N + V VP V +
Sbjct: 450 PSAIRQSGPRPALRHLAPTGNAPASRGLPTTTQRVGVPTAVQNLAPRAAVAAAAPRAVAP 509
Query: 533 ---ATPVETPRPVPVPIST------------LTSALASASPDDRTRMLGEQLYPLVENIE 577
A+ V +P P P+ S LA+A P ++ +MLGE+L+PL++ +
Sbjct: 510 YKYASSVRSPHPAIQPLQAQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMH 569
Query: 578 PVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 570 SNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 626
>gi|410263252|gb|JAA19592.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 305/658 (46%), Positives = 401/658 (60%), Gaps = 76/658 (11%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D +GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ 434
+G KPLYVA+AQRKEERKA L Q+ Q A GM L P Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQREA--GMRAL---------------PANAILNQ 400
Query: 435 GTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ-Q 493
P AAG G+ P + G P Y P L Q+ P R ++ G Q
Sbjct: 401 FQP------AAG-GYFVPAVPQAQ-GRPPYYTPNQLA-QMRPNPRW--QQGGRPQGFQGM 449
Query: 494 PQFMRNS--NQGIRYLDNARNGTDQ----SVVSMVPVPFEVSGMP--------------- 532
P +R S +R+L N + V VP V +
Sbjct: 450 PSAIRQSGPRPTLRHLAPTGNAPASRGLPTTTQRVGVPTAVQNLAPRAAVAAAAPRAVAP 509
Query: 533 ---ATPVETPRPVPVPIST------------LT-SALASASPDDRTRMLGEQLYPLVENI 576
A+ V +P P P+ LT S LA+A P ++ +MLGE+L+PL++ +
Sbjct: 510 YKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTM 569
Query: 577 EPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 570 HSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 627
>gi|344287655|ref|XP_003415568.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Loxodonta
africana]
Length = 631
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 305/658 (46%), Positives = 401/658 (60%), Gaps = 76/658 (11%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ 434
+G KPLYVA+AQRKEERKA L Q+ Q R G + A+ I + P G G
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ-RVAGMRALPANAI--LNQFQPAAG------GY 408
Query: 435 GTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ-Q 493
P + PQA G P Y P L Q+ P R ++ G Q
Sbjct: 409 FVPAV--PQAQGR--------------PPYYTPNQLA-QMRPNPRW--QQGGRPQGFQGM 449
Query: 494 PQFMRNS--NQGIRYLDNARNGTDQ----SVVSMVPVPFEVSGMP--------------- 532
P +R S +R+L N + V VP V +
Sbjct: 450 PSAIRQSGPRPALRHLAPTGNAPASRGLPTTAQRVGVPTAVQSLAPRAAVAAAAPRAVAP 509
Query: 533 ---ATPVETPRPVPVPIST------------LT-SALASASPDDRTRMLGEQLYPLVENI 576
A+ V +P P P+ LT S LA+A P ++ +MLGE+L+PL++ +
Sbjct: 510 YKYASSVRSPHPAMQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTM 569
Query: 577 EPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 570 HSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 627
>gi|383862669|ref|XP_003706806.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Megachile rotundata]
Length = 612
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 298/634 (47%), Positives = 387/634 (61%), Gaps = 60/634 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD +IDNKA+ DTF+AFG +LS
Sbjct: 68 ALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKVA D +G SKGYGFV FE EEAA +I +NGML+N K+VYVG F+ R+ER ++
Sbjct: 128 CKVAQDESGVSKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEK 187
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ FTNVYV N E +TD+ LK++F +GTITS VM DGKSR FGFV F+ PDAA
Sbjct: 188 AKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQ 247
Query: 263 AVEKLNGT-TNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV +LNG K YVGRAQK+AER+ +L+ KFEQ ++ R + +G NLY+KNLDDSI
Sbjct: 248 AVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLSRYQGVNLYVKNLDDSI 307
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
NDE+L+ F+ FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG++I KPLY
Sbjct: 308 NDERLRREFAPFGTITSAKVMME-DGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLY 366
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIP---GYHHGAPRLGPQQLYYGQGTPG 438
VA+AQRKE+RKA L +Q+ Q A M + P ++ P + Q +YG
Sbjct: 367 VALAQRKEDRKAHLASQYMQRLANMRMQQMGQMFPPGGAGNYFVPTIPQPQRFYG----- 421
Query: 439 LMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMR 498
P Q A Q + P P PN QV P +TG + MQ P R
Sbjct: 422 --PAQMA----QIRATPRW-PAQPN---------QVRPNAQTG---NSGFATMQGP--FR 460
Query: 499 NSNQGIRYLDNARNGTDQSVVSMVPVPF-------------EVSGMPATPVETPRPVPVP 545
+ + A+ GT +S +S P+ S M P P P P
Sbjct: 461 TTPRA----PTAQAGTMRSTLSARPITAVGVSAQSRPSNYKYTSNMRNPPQAMAIPAPTP 516
Query: 546 IS----------TLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTE 595
+ S LA+A P ++ +MLGE+L+PL++ + P K+TGMLLE+D +E
Sbjct: 517 VQQAVHIQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSE 576
Query: 596 VLHLIESPEALKTKVAEAMAVLQEAAARSDVNEK 629
+LH++E E+LK KV EA+AVLQ A+ V K
Sbjct: 577 LLHMLEHNESLKAKVEEAVAVLQAHQAKQAVASK 610
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y V+LYV +L+ ++N+ +L F+ + S +V + + S G+ +V +S P++A
Sbjct: 291 SRYQGVNLYVKNLDDSINDERLRREFAPFGTITSAKVMMEDGR--SKGFGFVCFSAPEEA 348
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
A +N I KP+ + + R RK+ + +++ L
Sbjct: 349 TKAVTEMNGRIIVTKPLYVALAQRKED-RKAHLASQYMQRL 388
>gi|410966844|ref|XP_003989937.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Felis catus]
Length = 631
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 303/658 (46%), Positives = 399/658 (60%), Gaps = 76/658 (11%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ 434
+G KPLYVA+AQRKEERKA L Q+ Q R G + A+ I + P G G
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ-RVAGMRALPANAI--LNQFQPAAG------GY 408
Query: 435 GTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ-Q 493
P + PQA G P Y P L Q+ P R ++ G Q
Sbjct: 409 FVPAV--PQAQGR--------------PPYYTPNQLA-QMRPNPRW--QQGGRPQGFQGM 449
Query: 494 PQFMRNS--NQGIRYLDNARNGTDQ----SVVSMVPVPFEVSGMP--------------- 532
P +R S +R+L N + V VP V +
Sbjct: 450 PSAIRQSGPRPALRHLAPTGNAPASRGLPTTAQRVGVPTAVQTLAPRAAVAAAAPRAVAP 509
Query: 533 ---ATPVETPRPVPVPIST-------------LTSALASASPDDRTRMLGEQLYPLVENI 576
A+ V +P P P+ S LA+A P ++ +MLGE+L+PL++ +
Sbjct: 510 YKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTM 569
Query: 577 EPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 570 HSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 627
>gi|208431836|ref|NP_001129126.1| polyadenylate-binding protein 4 isoform 3 [Homo sapiens]
gi|332808512|ref|XP_003308043.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730718|ref|XP_003775778.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pongo abelii]
gi|426329064|ref|XP_004025564.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Gorilla
gorilla gorilla]
gi|119627671|gb|EAX07266.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_f [Homo sapiens]
gi|410227602|gb|JAA11020.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 304/658 (46%), Positives = 402/658 (61%), Gaps = 76/658 (11%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D +GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ 434
+G KPLYVA+AQRKEERKA L Q+ Q R G + A+ I + P G G
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ-RVAGMRALPANAI--LNQFQPAAG------GY 408
Query: 435 GTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ-Q 493
P + PQA G P Y P L Q+ P R ++ G Q
Sbjct: 409 FVPAV--PQAQGR--------------PPYYTPNQLA-QMRPNPRW--QQGGRPQGFQGM 449
Query: 494 PQFMRNS--NQGIRYLDNARNGTDQ----SVVSMVPVPFEVSGMP--------------- 532
P +R S +R+L N + V VP V +
Sbjct: 450 PSAIRQSGPRPTLRHLAPTGNAPASRGLPTTTQRVGVPTAVQNLAPRAAVAAAAPRAVAP 509
Query: 533 ---ATPVETPRPVPVPIST------------LT-SALASASPDDRTRMLGEQLYPLVENI 576
A+ V +P P P+ LT S LA+A P ++ +MLGE+L+PL++ +
Sbjct: 510 YKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTM 569
Query: 577 EPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 570 HSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 627
>gi|402854031|ref|XP_003891684.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Papio anubis]
Length = 631
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 302/658 (45%), Positives = 399/658 (60%), Gaps = 76/658 (11%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ 434
+G KPLYVA+AQRKEERKA L Q+ Q R G + A+ I + P G G
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ-RVAGMRALPANAI--LNQFQPAAG------GY 408
Query: 435 GTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ-Q 493
P + PQA G P Y P L Q+ P R ++ G Q
Sbjct: 409 FVPAV--PQAQGR--------------PPYYTPNQLA-QMRPNPRW--QQGGRPQGFQGM 449
Query: 494 PQFMRNS--NQGIRYLDNARNGTDQ----SVVSMVPVPFEVSGMP--------------- 532
P +R S +R+L N + V VP V +
Sbjct: 450 PSAIRQSGPRPALRHLAPTGNAPASRGLPTTTQRVGVPTAVQNLAPRAAVAAAAPRAVAP 509
Query: 533 ---ATPVETPRPVPVPIST-------------LTSALASASPDDRTRMLGEQLYPLVENI 576
A+ V +P P P+ S LA+A P ++ +MLGE+L+PL++ +
Sbjct: 510 YKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTM 569
Query: 577 EPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 570 HSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 627
>gi|348517413|ref|XP_003446228.1| PREDICTED: polyadenylate-binding protein 4 [Oreochromis niloticus]
Length = 627
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 293/634 (46%), Positives = 394/634 (62%), Gaps = 46/634 (7%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ LY+ FS V+S+RVCRD R SLGYAYVN+S P DA
Sbjct: 8 YPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF + GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGY FV FE ++AA AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N + + DE LK+IF +G S VM D GKSR FGFV+++ + A
Sbjct: 187 AKEFTNVYIKNFGDDMDDERLKEIFDKYGKTLSVKVMTDPSGKSRGFGFVSYEKHEDANK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDD 319
AVE++NGT N K +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+KNLDD
Sbjct: 247 AVEEMNGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERISRYQ---GVNLYIKNLDD 303
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
+I+DEKL++ FS FG+ITS KVM+++ G SKG GF FS PEEAT+A+ EMNG+++G KP
Sbjct: 304 TIDDEKLRKEFSPFGSITSAKVMLEE-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKP 362
Query: 380 LYVAVAQRKEERKARLQAQFAQIRAPGGMSPLAS----------------GIPGYHHGAP 423
LYVA+AQRKEERKA L Q+ Q A GM + + +P +
Sbjct: 363 LYVALAQRKEERKAHLTNQYMQRIA--GMRAMPANAIINQFQPTSGYFMPAVPQAQNRTT 420
Query: 424 RLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVR 483
P QL + P G Q + LR GP + R + P T
Sbjct: 421 YYAPNQLAQMRPNPRWQQQGGRSQGGFQAMPSSLRQPGPRANL-----RHMSPSSSTQGP 475
Query: 484 RSGNTHQMQQPQFMRNSNQGI---RYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPR 540
R+G +P + + + +Y RN Q V P+ + + PA V+
Sbjct: 476 RAGGQSMGPRPSVGVSGPRAMPPYKYATGVRNPNPQVV---QPIALQQT-QPAVHVQGQE 531
Query: 541 PVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLI 600
P+ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLLE+D +E+LH++
Sbjct: 532 PL------TASMLAAAPPQEQKQMLGERLFPLIQAMHANLAGKITGMLLEIDNSELLHML 585
Query: 601 ESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
ES E+L++KV EA+AVLQ A+ D +K+G +A
Sbjct: 586 ESHESLRSKVEEAVAVLQAHQAKKDATQKVGGMA 619
>gi|148698435|gb|EDL30382.1| mCG5546, isoform CRA_a [Mus musculus]
Length = 632
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 301/653 (46%), Positives = 401/653 (61%), Gaps = 82/653 (12%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 20 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 79
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF + GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 80 ADAERALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 139
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 140 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 198
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V D +LK++F FG S VM+DS GKS+ FGFV+++
Sbjct: 199 ELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKH 258
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 259 EDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 315
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL+ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 316 KNLDDTIDDEKLRREFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 374
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ 434
+G KPLYVA+AQRKEERKA L Q+ Q R G + AS I + P G G
Sbjct: 375 VGSKPLYVALAQRKEERKAHLTNQYMQ-RVAGMRALPASAI--LNQFQPAAG------GY 425
Query: 435 GTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQP 494
P + PQA G RP PY+ P Q +R + Q +P
Sbjct: 426 FVPAV--PQAQG-----------RP-------PYYT-----PNQLAQMRPNPRWQQGGRP 460
Query: 495 QFMRNSNQGIRYLDNARNGTDQSVVSMVP--VPFEVSGMP------------------AT 534
Q + +R ++G ++ + P VP V + A+
Sbjct: 461 QGFQGMPSALR-----QSGPRPALRHLAPTGVPTAVPNLAPRAAVAAAAPRAVAPYKYAS 515
Query: 535 PVETPRPVPVPIST------------LT-SALASASPDDRTRMLGEQLYPLVENIEPVHA 581
V +P P P+ LT S LA+A P ++ +MLGE+L+PL++ + A
Sbjct: 516 SVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLA 575
Query: 582 SKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 576 GKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGTVA 628
>gi|332248417|ref|XP_003273360.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|383411099|gb|AFH28763.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
gi|384941234|gb|AFI34222.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
Length = 631
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 304/658 (46%), Positives = 401/658 (60%), Gaps = 76/658 (11%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ 434
+G KPLYVA+AQRKEERKA L Q+ Q R G + A+ I + P G G
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ-RVAGMRALPANAI--LNQFQPAAG------GY 408
Query: 435 GTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ-Q 493
P + PQA G P Y P L Q+ P R ++ G Q
Sbjct: 409 FVPAV--PQAQGR--------------PPYYTPNQLA-QMRPNPRW--QQGGRPQGFQGM 449
Query: 494 PQFMRNS--NQGIRYLDNARNGTDQ----SVVSMVPVPFEVSGMP--------------- 532
P +R S +R+L N + V VP V +
Sbjct: 450 PSAIRQSGPRPTLRHLAPTGNAPASRGLPTTTQRVGVPTAVQNLAPRAAVAAAAPRAVAP 509
Query: 533 ---ATPVETPRPVPVPIST------------LT-SALASASPDDRTRMLGEQLYPLVENI 576
A+ V +P P P+ LT S LA+A P ++ +MLGE+L+PL++ +
Sbjct: 510 YKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTM 569
Query: 577 EPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 570 HSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 627
>gi|149608633|ref|XP_001515603.1| PREDICTED: polyadenylate-binding protein 4 [Ornithorhynchus
anatinus]
Length = 630
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 307/662 (46%), Positives = 402/662 (60%), Gaps = 79/662 (11%)
Query: 16 ATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVN 75
+TTA S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN
Sbjct: 2 STTA---SSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVN 58
Query: 76 YSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDT 135
+ P DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DT
Sbjct: 59 FQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDT 118
Query: 136 FAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ 195
F+AFG +LSCKV D NG SKGY FV FE ++AA AI+ +NGML+ND++V+VG F R+
Sbjct: 119 FSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRK 177
Query: 196 ERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVN 253
ER + + +FTNVY+ N + + DE LK++F +G S VM D GKS+ FGFV+
Sbjct: 178 EREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPSGKSKGFGFVS 237
Query: 254 FQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGA 310
F+ + A AVE +NG N K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G
Sbjct: 238 FEKHEDANQAVEDMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GV 294
Query: 311 NLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEM 370
NLY+KNLDD+I+DEKL++ FS FG+ITS KVM+++ G SKG GF FS PEEAT+A+ EM
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEE-GRSKGFGFVCFSSPEEATKAVTEM 353
Query: 371 NGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQL 430
NG+++G KPLYVA+AQRKEERKA L Q+ Q A GM L P
Sbjct: 354 NGRIVGSKPLYVALAQRKEERKAHLTNQYMQRIA--GMRAL---------------PANT 396
Query: 431 YYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQ 490
Q P AAG G+ P + P Y P + Q+ P R +++G
Sbjct: 397 IINQFQP------AAG-GYFMPAVPQAQ-SRPTYYAPNQMA-QMRPNPRW--QQAGRLQG 445
Query: 491 MQ-QPQFMRNS--NQGIRYLDNARNGTDQSVVSMVP----VPFEVSGM-PATPV--ETPR 540
Q P MR S +R+L A N + P VP + P PV TPR
Sbjct: 446 FQGMPNAMRQSGPRPALRHLTPAGNAQASRGLPAAPQRVGVPPAAQNLAPRAPVAAATPR 505
Query: 541 PVPV---------------PIST-------------LTSALASASPDDRTRMLGEQLYPL 572
VP P+ S LA+A P ++ +MLGE+L+PL
Sbjct: 506 AVPPYKYASNVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPL 565
Query: 573 VENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGS 632
++ + P A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G
Sbjct: 566 IQAMHPSLAGKITGMLLEIDNSELLHMLESPESLRSKVEEAVAVLQAHQAKKEAAQKVGV 625
Query: 633 LA 634
+A
Sbjct: 626 VA 627
>gi|22507391|ref|NP_683717.1| polyadenylate-binding protein 4 isoform 2 [Mus musculus]
gi|16307591|gb|AAH10345.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 615
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 301/653 (46%), Positives = 401/653 (61%), Gaps = 82/653 (12%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF + GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V D +LK++F FG S VM+DS GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL+ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRREFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ 434
+G KPLYVA+AQRKEERKA L Q+ Q R G + AS I + P G G
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ-RVAGMRALPASAI--LNQFQPAAG------GY 408
Query: 435 GTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQP 494
P + PQA G RP PY+ P Q +R + Q +P
Sbjct: 409 FVPAV--PQAQG-----------RP-------PYYT-----PNQLAQMRPNPRWQQGGRP 443
Query: 495 QFMRNSNQGIRYLDNARNGTDQSVVSMVP--VPFEVSGMP------------------AT 534
Q + +R ++G ++ + P VP V + A+
Sbjct: 444 QGFQGMPSALR-----QSGPRPALRHLAPTGVPTAVPNLAPRAAVAAAAPRAVAPYKYAS 498
Query: 535 PVETPRPVPVPIST------------LT-SALASASPDDRTRMLGEQLYPLVENIEPVHA 581
V +P P P+ LT S LA+A P ++ +MLGE+L+PL++ + A
Sbjct: 499 SVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLA 558
Query: 582 SKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 559 GKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGTVA 611
>gi|395853072|ref|XP_003799044.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Otolemur
garnettii]
Length = 633
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 305/660 (46%), Positives = 401/660 (60%), Gaps = 78/660 (11%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ 434
+G KPLYVA+AQRKEERKA L Q+ Q R G + A+ I + P G G
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ-RVAGMRALPANAI--LNQFQPAAG------GY 408
Query: 435 GTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ-Q 493
P + PQA G P Y P L Q+ P R ++ G Q
Sbjct: 409 FVPAV--PQAQGR--------------PPYYTPNQLA-QMRPNPRW--QQGGRPQGFQGM 449
Query: 494 PQFMRNS--NQGIRYLDNARNGTDQ----SVVSMVPVPFEVSGMP--------------- 532
P +R S +R+L N + V VP V +
Sbjct: 450 PSAIRQSGPRPTLRHLAPTGNAPASRGLPTTTQRVGVPTAVQNLAPRAAVAAATAAPRAV 509
Query: 533 -----ATPVETPRPVPVPIST------------LT-SALASASPDDRTRMLGEQLYPLVE 574
A+ V +P P P+ LT S LA+A P ++ +MLGE+L+PL++
Sbjct: 510 APYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQ 569
Query: 575 NIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
+ A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 570 TMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 629
>gi|41388837|gb|AAH65540.1| PABPC4 protein [Homo sapiens]
Length = 631
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 303/658 (46%), Positives = 401/658 (60%), Gaps = 76/658 (11%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNK L DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKVLYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D +GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ 434
+G KPLYVA+AQRKEERKA L Q+ Q R G + A+ I + P G G
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ-RVAGMRALPANAI--LNQFQPAAG------GY 408
Query: 435 GTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ-Q 493
P + PQA G P Y P L Q+ P R ++ G Q
Sbjct: 409 FVPAV--PQAQGR--------------PPYYTPNQLA-QMRPNPRW--QQGGRPQGFQGM 449
Query: 494 PQFMRNS--NQGIRYLDNARNGTDQ----SVVSMVPVPFEVSGMP--------------- 532
P +R S +R+L N + V VP V +
Sbjct: 450 PSAIRQSGPRPTLRHLAPTGNAPASRGLPTTTQRVGVPTAVQNLAPRAAVAAAAPRAVAP 509
Query: 533 ---ATPVETPRPVPVPIST------------LT-SALASASPDDRTRMLGEQLYPLVENI 576
A+ V +P P P+ LT S LA+A P ++ +MLGE+L+PL++ +
Sbjct: 510 YKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTM 569
Query: 577 EPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 570 HSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 627
>gi|41053728|ref|NP_957176.1| poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|37590406|gb|AAH59662.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|39645430|gb|AAH63948.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
Length = 634
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 293/632 (46%), Positives = 394/632 (62%), Gaps = 41/632 (6%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL Q+V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+P+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + D+ LK IF +G S VM D +GKSR FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDDKLKDIFSKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQR 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K+ YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKEMNGKLIYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM+D G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMMD-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRAPGG--MSPLASGIP-GYHHGA-PRLGPQQLYYGQ 434
A+AQRKEER+A L Q+ Q +RA ++P P GY A P+ + YY
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQAQNRAAYYPT 425
Query: 435 GTPG-LMP-PQAAGYGFQQQVF---PG-LRPGGP-----NYIMPYHLQRQVHPGQRTGVR 483
L P P+ G + Q F PG +RP P + + P ++ QR +
Sbjct: 426 SQLAQLRPSPRWTTQGVRPQHFQNMPGTMRPSAPRPQTFSTMRPASQVPRMMSTQRVATQ 485
Query: 484 RSGNTHQMQQPQFMRNSNQGI---RYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPR 540
G +G+ +Y + RN M P PA V+
Sbjct: 486 TMGPRPSTAAAAASAPPVRGVPQYKYAPSVRNPQQH----MNTQPQVTMQQPAVHVQGQE 541
Query: 541 PVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLI 600
P+ S LA+A P ++ +MLGE+L+PL++N+ P A K+TGMLLE+D +E+LH++
Sbjct: 542 PL------TASMLAAAPPQEQKQMLGERLFPLIQNMHPSLAGKITGMLLEIDNSELLHML 595
Query: 601 ESPEALKTKVAEAMAVLQ-----EAAARSDVN 627
ESPE+L++KV EA+AVLQ EAA ++ N
Sbjct: 596 ESPESLRSKVDEAVAVLQAHQAKEAAQKTVTN 627
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 171/298 (57%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I + V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++D+KLK++FS++G S +VM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDDKLKDIFSKYGNAMSIRVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+G S+G GF +F E+A RA++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 NGKSRGFGFVSFERHEDAQRAVDEMNGKEMNGKLIYVGRAQKKVERQTELKRKFEQMK 284
>gi|338721952|ref|XP_003364452.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Equus
caballus]
Length = 631
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 304/657 (46%), Positives = 400/657 (60%), Gaps = 76/657 (11%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ 434
+G KPLYVA+AQRKEERKA L Q+ Q R G + A+ I + P G G
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ-RVAGMRALPANAI--LNQFQPAAG------GY 408
Query: 435 GTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ-Q 493
P + PQA G P Y P L Q+ P R ++ G Q
Sbjct: 409 FVPAV--PQAQGR--------------PPYYTPNQLA-QMRPNPRW--QQGGRPQGFQGM 449
Query: 494 PQFMRNS--NQGIRYLDNARNGTDQ----SVVSMVPVPFEVSGMP--------------- 532
P +R S +R+L N + V VP V +
Sbjct: 450 PSAIRQSGPRPTLRHLAPTGNAPASRGLPTTAQRVGVPTAVQNLAPRAAVAAAAPRAVAP 509
Query: 533 ---ATPVETPRPVPVPIST------------LT-SALASASPDDRTRMLGEQLYPLVENI 576
A+ V +P P P+ LT S LA+A P ++ +MLGE+L+PL++ +
Sbjct: 510 YKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTM 569
Query: 577 EPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSL 633
A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++
Sbjct: 570 HSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAV 626
>gi|118101731|ref|XP_417821.2| PREDICTED: polyadenylate-binding protein 4 [Gallus gallus]
Length = 630
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 302/652 (46%), Positives = 404/652 (61%), Gaps = 64/652 (9%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAGSSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE ++AA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N + + DE LK++F +G S VM D GKS+ FGFV+F+
Sbjct: 182 ELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG N K+ +VGRAQK+ ER+A+L+ +FE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPL-----------ASGIPGYHHGA- 422
+G KPLYVA+AQRKEERKA L Q+ Q A GM L A+G GY A
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQRIA--GMRALPANTIINQFQPAAG--GYFMPAV 413
Query: 423 PRLGPQQLYYGQGTPGLMPPQAAG-YGFQQQVFPG----LRPGGPNYIMPYHLQRQVHP- 476
P+ + YY M P G + Q F G +R GP + + P
Sbjct: 414 PQAQSRPTYYAPNQMAQMRPNPRWQQGGRPQGFQGMPNAMRQSGPRPALRHLAPAGTAPA 473
Query: 477 -------GQRTGVRRSGNT--HQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFE 527
QR GV +G + + + +Y + R+ P P
Sbjct: 474 SRGLPVSAQRVGVTTAGQSLAPRPPVAAPAPRAVPPYKYASSVRS----------PHP-- 521
Query: 528 VSGMPATPVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHAS 582
P P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + P A
Sbjct: 522 ----PVQPLQAPQPAVHVQGQEPLT--ASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAG 575
Query: 583 KVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G +A
Sbjct: 576 KITGMLLEIDNSELLHMLESPESLRSKVEEAVAVLQAHQAKKEAAQKVGVVA 627
>gi|302767104|ref|XP_002966972.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
gi|300164963|gb|EFJ31571.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
Length = 654
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 300/621 (48%), Positives = 395/621 (63%), Gaps = 37/621 (5%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
VSLYVGDL++ V E+QL+ +FSQ+ V SVRVCRD R SLGY YVNYS+ DA A E
Sbjct: 38 VSLYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAME 97
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
ALN+ PINGK IRIM+SHRDPS RKSG GN+FIKNLD SIDNKAL DTF AFG +LSCK+
Sbjct: 98 ALNYTPINGKTIRIMWSHRDPSTRKSGVGNIFIKNLDESIDNKALHDTFIAFGPILSCKI 157
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A +G+SKGYGFV FE +EAA AI+ +NGM + K+V+V FV+R +R KFT
Sbjct: 158 A-HQDGRSKGYGFVHFETDEAANLAIEKVNGMQLVGKKVFVAKFVKRSDRLAATGETKFT 216
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NV+V NL + +E++K+ F FG IT+ ++MKD + KS+ FGFVNF P+AA AAVE +
Sbjct: 217 NVFVKNLDPEMAEEEIKEHFSTFGVITNVVIMKDENDKSKGFGFVNFDDPEAARAAVETM 276
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
N + + YVGRAQK+AERE LR +FE++R+ +++K +GANLY+KNLDDSI+DE LK
Sbjct: 277 NNSQLGSRTIYVGRAQKKAEREQILRRQFEEKRMEQFQKYQGANLYVKNLDDSIDDETLK 336
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
+ FS +G ITS KVM D+ G SKG GF F+ PEEA+RA E NG MI KP+YVA+AQR
Sbjct: 337 QEFSRYGNITSAKVMRDEKGISKGFGFVCFTSPEEASRAATETNGLMINGKPIYVAMAQR 396
Query: 388 KEERKARLQAQFAQIRAPGGMSP----LASGIPGYHHGAPRLGPQQLYYGQGTPGLMP-- 441
KE R+A+LQ Q R G M P +A+ P ++ AP P L+P
Sbjct: 397 KEIRQAQLQQQ-YAQRMSGLMPPPGAQVAAAYPPVYYAAP-------------PALLPQV 442
Query: 442 PQAAGYGFQQQVFPGLR------PGGPNY--IMPYHLQRQVHPGQRTGVRR-SGNTHQMQ 492
PQ G +Q + PG R PG P+ + PY L QR R G Q
Sbjct: 443 PQRQGLMYQPVMRPGWRTGPLAPPGRPSLQPLPPYALVPNAQRQQRQVRNRPPGGQPLAQ 502
Query: 493 QPQFMRNSNQGIR---YLDNARNGTDQSVVSMVPV----PFEVSGMPATPVETPRPVPVP 545
PQ Q I+ Y +N RN + +M V P + + + P +P+
Sbjct: 503 IPQLQIPQPQAIQPGGYKENGRNQQQRPRQAMKYVNNGRPRDGAAAGGPVLMVPGNMPMG 562
Query: 546 ISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEA 605
+ + S +++ASP + ++LGE+L+PLV + A K+TGMLLEMD +E+L L+E+PEA
Sbjct: 563 GNDVLSMMSAASPQQQKQLLGERLFPLVRTHQFDLAGKITGMLLEMDNSELLVLLETPEA 622
Query: 606 LKTKVAEAMAVLQEAAARSDV 626
L +KV EA+ VLQ+ + S V
Sbjct: 623 LASKVDEAVQVLQQHSKASTV 643
>gi|148298695|ref|NP_001091823.1| poly A binding protein [Bombyx mori]
gi|111608107|gb|ABH10797.1| poly A binding protein [Bombyx mori]
Length = 603
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 290/620 (46%), Positives = 379/620 (61%), Gaps = 39/620 (6%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AFG +LSCKVA
Sbjct: 63 MNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALFDTFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D G SKGYGFV FE EEAA +I+ +NGML+N K VYVG F+ R+ER ++ + F
Sbjct: 123 QDETGASKGYGFVHFETEEAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLF 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV N E +DE LK +F +G ITS VM DG SR FGFV F+ PDAA A +
Sbjct: 183 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 242
Query: 267 LNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LNG + K YVGRAQK+AER+ +L+ KFEQ + R + +G NLY+KNLDD+I+DE+
Sbjct: 243 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 302
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L++ F+ FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++G KPLYVA+A
Sbjct: 303 LRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 361
Query: 386 QRKEERKARLQAQFAQIRAPGGMSPLA-----SGIPGYHHGAPRLGPQQLYYGQGTPGLM 440
QRKE+RKA L +Q+ Q A M + SG G+ P L P YYG +
Sbjct: 362 QRKEDRKAHLTSQYMQRMASMRMQQMGQIFQPSGASGFF--VPSLPPAPRYYGPAQMTQI 419
Query: 441 PPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNS 500
P + Q P +RP ++Q P R + + T +P
Sbjct: 420 RPTTPRWNAQ----PPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARP------ 469
Query: 501 NQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPR----PVPVPI------STLT 550
+ G + S+ P S PA TP P P P LT
Sbjct: 470 -------ITGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPAVHIQGQEPLT 522
Query: 551 SALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTK 609
S + +A+P ++ +MLGE+L+PL++ + P A K+TGMLLE+D +E+LH++E E+LK K
Sbjct: 523 STMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAK 582
Query: 610 VAEAMAVLQEAAARSDVNEK 629
V EA+AVLQ A+ +K
Sbjct: 583 VDEAVAVLQAHQAKQQATKK 602
>gi|383862667|ref|XP_003706805.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Megachile rotundata]
Length = 630
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 287/622 (46%), Positives = 385/622 (61%), Gaps = 18/622 (2%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD +IDNKA+ DTF+AFG +LS
Sbjct: 68 ALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKVA D +G SKGYGFV FE EEAA +I +NGML+N K+VYVG F+ R+ER ++
Sbjct: 128 CKVAQDESGVSKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEK 187
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ FTNVYV N E +TD+ LK++F +GTITS VM DGKSR FGFV F+ PDAA
Sbjct: 188 AKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQ 247
Query: 263 AVEKLNGT-TNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV +LNG K YVGRAQK+AER+ +L+ KFEQ ++ R + +G NLY+KNLDDSI
Sbjct: 248 AVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLSRYQGVNLYVKNLDDSI 307
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
NDE+L+ F+ FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG++I KPLY
Sbjct: 308 NDERLRREFAPFGTITSAKVMME-DGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLY 366
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIP---GYHHGAPRLGPQQLYYGQGTPG 438
VA+AQRKE+RKA L +Q+ Q A M + P ++ P + Q +YG
Sbjct: 367 VALAQRKEDRKAHLASQYMQRLANMRMQQMGQMFPPGGAGNYFVPTIPQPQRFYGPAQMA 426
Query: 439 LMPPQAAGYGFQQQVFPGLRPGGPNYIM---PYHLQRQVHPGQRTGVRRSGNTHQMQQPQ 495
+ QV P + G + P+ + Q +R + + + Q
Sbjct: 427 QIRATPRWPAQPNQVRPNAQTGNSGFATMQGPFRTTPRAPTAQAGTMRSTLSARPITGQQ 486
Query: 496 FMRNSNQGIRYLDNARNG-------TDQSVVSMVPVPFEVSGMPA-TPVETPRPVPVPIS 547
+ +N R + G ++ S + P + +PA TPV+ +
Sbjct: 487 AVGGANMQSRSMAGPAVGVSAQSRPSNYKYTSNMRNPPQAMAIPAPTPVQQAVHIQGQEP 546
Query: 548 TLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALK 607
S LA+A P ++ +MLGE+L+PL++ + P K+TGMLLE+D +E+LH++E E+LK
Sbjct: 547 LTASMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSELLHMLEHNESLK 606
Query: 608 TKVAEAMAVLQEAAARSDVNEK 629
KV EA+AVLQ A+ V K
Sbjct: 607 AKVEEAVAVLQAHQAKQAVASK 628
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y V+LYV +L+ ++N+ +L F+ + S +V + + S G+ +V +S P++A
Sbjct: 291 SRYQGVNLYVKNLDDSINDERLRREFAPFGTITSAKVMMEDGR--SKGFGFVCFSAPEEA 348
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
A +N I KP+ + + R RK+ + +++ L
Sbjct: 349 TKAVTEMNGRIIVTKPLYVALAQRKED-RKAHLASQYMQRL 388
>gi|340719924|ref|XP_003398394.1| PREDICTED: polyadenylate-binding protein 1-like isoform 4 [Bombus
terrestris]
Length = 612
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 298/634 (47%), Positives = 389/634 (61%), Gaps = 60/634 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD +IDNKA+ DTF+AFG +LS
Sbjct: 68 ALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKVA D +G SKGYGFV FE EEAA +I +NGML+N K+VYVG F+ R+ER ++
Sbjct: 128 CKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFIPRKEREKELGEK 187
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ FTNVYV N E +TD+ LK++F +GTITS VM DGKSR FGFV F+ PDAA
Sbjct: 188 AKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQ 247
Query: 263 AVEKLNGT-TNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV +LNG K YVGRAQK+AER+ +L+ KFEQ ++ R + +G NLY+KNLDDSI
Sbjct: 248 AVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSI 307
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DE+L++ F+ FGTITS KVM+++ G SKG GF FS PEEAT+A+ EMNG++I KPLY
Sbjct: 308 DDERLRKEFAPFGTITSAKVMMEE-GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLY 366
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSPLASGI-PG--YHHGAPRLGPQQLYYGQGTPG 438
VA+AQRKE+RKA L +Q+ Q A M + PG ++ P + Q +YG
Sbjct: 367 VALAQRKEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYFVPTIPQPQRFYG----- 421
Query: 439 LMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMR 498
P Q A Q + P P PN QV P +TG S MQ P R
Sbjct: 422 --PAQMA----QIRTTPRW-PAQPN---------QVRPNAQTG---SSGFATMQGP--FR 460
Query: 499 NSNQGIRYLDNARNGTDQSVVSMVPVPF-------------EVSGMPATPVETPRPVPVP 545
+ + A+ G +S +S P+ S M P P P P
Sbjct: 461 AAPRA----PTAQPGAMRSTLSARPITAVGVSAQSRPSNYKYTSNMRNPPQAMAIPTPTP 516
Query: 546 IS----------TLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTE 595
+ S LA+A P ++ +MLGE+L+PL++ + P K+TGMLLE+D +E
Sbjct: 517 VQQAVHIQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSE 576
Query: 596 VLHLIESPEALKTKVAEAMAVLQEAAARSDVNEK 629
+LH++E E+LK KV EA+AVLQ A+ V K
Sbjct: 577 LLHMLEHNESLKAKVEEAVAVLQAHQAKQAVASK 610
>gi|224081795|ref|XP_002196994.1| PREDICTED: polyadenylate-binding protein 4 [Taeniopygia guttata]
Length = 629
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 299/642 (46%), Positives = 397/642 (61%), Gaps = 51/642 (7%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y SLYVGDL ++ E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 6 SSYPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AFG +
Sbjct: 66 ERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNI 125
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKV D NG SKGY FV FE ++AA AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 126 LSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +FTNVY+ N + + DE LK++FG +G S VM D GKS+ FGFV+F+ + A
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTDPTGKSKGFGFVSFEKHEEA 244
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNL 317
AVE++NG N K+ +VGRAQK+AER+A+L+ +FE QER+SRY+ G NLY+KNL
Sbjct: 245 NKAVEEMNGKDINGKMLFVGRAQKKAERQAELKRRFEQLKQERLSRYQ---GVNLYIKNL 301
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
DD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++G
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 378 KPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPL-----------ASGIPGYHHGA-PRL 425
KPLYVA+AQRKEERKA L Q+ Q A GM L A+G GY A P+
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRIA--GMRALPANTIINQFQPAAG--GYFMPAVPQA 416
Query: 426 GPQQLYYGQGTPGLMPPQAAG-YGFQQQVFPG----LRPGGPNYIMPYHLQRQVHP---- 476
+ YY M P G + Q F G +R GP + HL P
Sbjct: 417 QSRPTYYAPNQMTQMRPNPRWQQGGRPQGFQGMPNAMRQSGPRPAL-RHLSPANAPASRG 475
Query: 477 ----GQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMP 532
QR GV + + P Y + + V + P P
Sbjct: 476 LPAAAQRVGVGTAAQNLAPRPPVAAPAPRAVPPYKYASSVRSPHPGVQPLQAP-----QP 530
Query: 533 ATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMD 592
A V+ P+ S LA+A P ++ +MLGE+L+PL++ + P A K+TGMLLE+D
Sbjct: 531 AVLVQGQEPL------TASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEID 584
Query: 593 QTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
+E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G +A
Sbjct: 585 NSELLHMLESPESLRSKVEEAVAVLQAHQAKKEAAQKVGVVA 626
>gi|395526571|ref|XP_003765434.1| PREDICTED: polyadenylate-binding protein 4 [Sarcophilus harrisii]
Length = 630
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 298/648 (45%), Positives = 392/648 (60%), Gaps = 80/648 (12%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 6 SSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AFG +
Sbjct: 66 ERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNI 125
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKV D NG SKGY FV FE ++AA AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 126 LSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +FTNVY+ N + + DE LK++F +G S VM DS GKS+ FGFV+F+ + A
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDSSGKSKGFGFVSFEKHEDA 244
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNL 317
AVE++NG N K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+KNL
Sbjct: 245 NKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYIKNL 301
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
DD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS P+EAT+A+ EMNG+++G
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPDEATKAVTEMNGRIVGS 360
Query: 378 KPLYVAVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHH 420
KPLYVA+AQRKEERKA L Q+ Q +RA PGG +P +
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPTPGGY--FMPAVPQAQN 418
Query: 421 GAPRLGPQQLYYGQGTPGLMPPQAAGY--GFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQ 478
P P Q+ + P Q G GF Q V +R GP + R + P
Sbjct: 419 RPPYYAPNQIAQMRPNPRW---QQGGRPQGF-QGVPNAIRQSGPRPTL-----RHLTPAS 469
Query: 479 RTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMP------ 532
T R T PQ R G +V ++ P P + P
Sbjct: 470 NTQASRGLPT----TPQ---------------RVGVPTAVQNLSPRPSVATPAPRAVPPY 510
Query: 533 --ATPVETPRPVPVPIST-------------LTSALASASPDDRTRMLGEQLYPLVENIE 577
A V +P P P+ T S LA+A P ++ +MLGE+L+PL++ +
Sbjct: 511 KYAANVRSPHPAIQPLQTPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMH 570
Query: 578 PVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSD 625
A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ +
Sbjct: 571 NNLAGKITGMLLEIDNSELLHMLESPESLRSKVEEAVAVLQAHHAKKE 618
>gi|432937502|ref|XP_004082431.1| PREDICTED: polyadenylate-binding protein 4-like [Oryzias latipes]
Length = 629
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 299/635 (47%), Positives = 395/635 (62%), Gaps = 50/635 (7%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ LY+ FS V+S+RVCRD R SLGYAYVN+S P DA
Sbjct: 8 YPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF + GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGY FV FE ++AA AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N + + DE LK++F +G S VM DS GKSR FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGDEMEDEQLKEMFEKYGKTLSVKVMTDSSGKSRGFGFVSFEKHEDANK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDD 319
AVE++NGT N K +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+KNLDD
Sbjct: 247 AVEEINGTELNGKTVFVGRAQKKMERQAELKRKFELLKQERISRYQ---GVNLYIKNLDD 303
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++G KP
Sbjct: 304 TIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKP 362
Query: 380 LYVAVAQRKEERKARLQAQFAQ-IRAPGGMSPLA--------SG-----IPGYHHGAPRL 425
LYVA+AQRKEERKA L Q+ Q I M P A SG +P +
Sbjct: 363 LYVALAQRKEERKAHLTNQYMQRIAGMRAMPPNAIINQFQPTSGYFMPAVPQAQNRTTYY 422
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHP-GQRTGVRR 484
P QL + P G G Q + LR GP M R + P G G R
Sbjct: 423 APNQLAQMRPNPRWQQQGGRGQGGFQGMPSSLRQPGPRGNM-----RHMSPSGGSQGPRA 477
Query: 485 SGNTHQ------MQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVET 538
SG + + P+ M +Y + RN Q V P+ + PA ++
Sbjct: 478 SGQSMAPRPSMGVPGPRTM----SPYKYATSVRNPNPQVV---QPIALQ-QAQPAVHIQG 529
Query: 539 PRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLH 598
P+ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLLE+D +E+LH
Sbjct: 530 QEPL------TASMLAAAPPQEQKQMLGERLFPLIQAMHANLAGKITGMLLEIDNSELLH 583
Query: 599 LIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSL 633
++ES E+L++KV EA+AVLQ A+ D +K+ +
Sbjct: 584 MLESHESLQSKVEEAVAVLQAHQAKKDATQKVAGM 618
>gi|357628251|gb|EHJ77641.1| poly A binding protein [Danaus plexippus]
Length = 601
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 292/622 (46%), Positives = 385/622 (61%), Gaps = 45/622 (7%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLHSDITEAMLFEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPSDAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD +IDNKA+ DTF+AFG +LSCKVA
Sbjct: 63 MNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKAIDNKAMYDTFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D NG SKGYGFV FE EEAA +I+ +NGML+N K+VYVG F+ R+ER ++ + F
Sbjct: 123 QDENGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLF 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV N E +DE L+ +F +G ITS VM DG SR FGFV F+ PDAA A +
Sbjct: 183 TNVYVKNFGEDFSDEMLRDMFEKYGRITSHKVMYKEDGSSRGFGFVAFEDPDAAERACLE 242
Query: 267 LNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LNG + K YVGRAQK+AER+ +L+ KFEQ + R + +G NLY+KNLDD+I+DE+
Sbjct: 243 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 302
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L++ F+ FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++G KPLYVA+A
Sbjct: 303 LRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 361
Query: 386 QRKEERKARLQAQFAQIRAPGGMSPLASGI-PGYHHG--APRLGPQQLYYGQGTPGLMPP 442
QRKE+RKA L +Q+ Q A M + PG G P + P Q +YG P
Sbjct: 362 QRKEDRKAHLTSQYMQRMASMRMQQMGQIFQPGSAGGYFVPTIPPAQRFYG-------PA 414
Query: 443 QAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQ 502
Q Q+ P R + Q V P +T N +P +
Sbjct: 415 QIT------QMRPSQR---------WTAQPPVRPSTQTAASAYPNMQAPFRPTTRGPTQT 459
Query: 503 GIRYLDNARNGTDQSVVSMVP---VPFEVSGMPA-----TPVETPRPVPVPI------ST 548
+R AR T Q V+ P P SG A + V P P P P
Sbjct: 460 ALRTSLGARPITGQQGVAAAPSIRAPLVPSGRTAGYKYTSTVRNP-PAPQPAVHIQGQEP 518
Query: 549 LTSALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALK 607
LT+++ +A+P ++ +MLGE+L+PL++ + P A K+TGMLLE+D +E+LH++E E+LK
Sbjct: 519 LTASMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLK 578
Query: 608 TKVAEAMAVLQEAAARSDVNEK 629
KV EA+AVLQ A+ +K
Sbjct: 579 AKVDEAVAVLQAHQAKQQATKK 600
>gi|348513241|ref|XP_003444151.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oreochromis niloticus]
Length = 637
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 293/640 (45%), Positives = 401/640 (62%), Gaps = 54/640 (8%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL Q+V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+P+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGQPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N + + DE L+++F +G S VM D +GKSR FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K+ YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKEMNGKLMYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRAPGG--MSPLASGIP-GYHHGA-PRLGPQQLYY-- 432
A+AQRKEER+A L Q+ Q +RA ++P + P GY A P+ + YY
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQAAPPSGYFMAAIPQAQNRAAYYPA 425
Query: 433 ----GQGTPGLMPPQAAGYGFQQQVFP----GLRPGGP-----NYIMPYHLQRQVHPGQR 479
Q PG P+ + Q F G+RP GP + + P ++ QR
Sbjct: 426 AGQMAQLRPG---PRWTTQNVRPQHFQNMSGGIRPSGPRPQTFSTVRPSSQVPRMMTTQR 482
Query: 480 TGVRRSGNTHQMQQPQFMRNSN----QGI---RYLDNARNGTDQSVVSMVPVPFEVSGMP 532
G +S +T +P + +G+ +Y RN M P P
Sbjct: 483 VG--QSTDTTMGPRPATAAAAAATPVRGVPQYKYAAGVRNPQQH----MNTQPQVTMQQP 536
Query: 533 ATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMD 592
A V+ P+ S LA+A P ++ +MLGE+L+PL++N+ P A K+TGMLLE+D
Sbjct: 537 AVHVQGQEPL------TASMLAAAPPQEQKQMLGERLFPLIQNMHPSLAGKITGMLLEID 590
Query: 593 QTEVLHLIESPEALKTKVAEAMAVLQ-----EAAARSDVN 627
+E+LH++ESPE+L++KV EA+AVLQ EAA ++ N
Sbjct: 591 NSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKTVTN 630
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 171/298 (57%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I + V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGQPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN D ++DEKL+ELFS++G S +VM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+G S+G GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 NGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKLMYVGRAQKKVERQTELKRKFEQMK 284
>gi|348513239|ref|XP_003444150.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oreochromis niloticus]
Length = 634
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 293/636 (46%), Positives = 397/636 (62%), Gaps = 49/636 (7%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL Q+V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+P+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGQPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N + + DE L+++F +G S VM D +GKSR FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K+ YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKEMNGKLMYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRAPGG--MSPLASGIP-GYHHGA-PRLGPQQLYY-- 432
A+AQRKEER+A L Q+ Q +RA ++P + P GY A P+ + YY
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQAAPPSGYFMAAIPQAQNRAAYYPA 425
Query: 433 ----GQGTPGLMPPQAAGYGFQQQVFP----GLRPGGP-----NYIMPYHLQRQVHPGQR 479
Q PG P+ + Q F G+RP GP + + P ++ QR
Sbjct: 426 AGQMAQLRPG---PRWTTQNVRPQHFQNMSGGIRPSGPRPQTFSTVRPSSQVPRMMTTQR 482
Query: 480 TGVRRSG---NTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPV 536
G + G T +R Q +Y RN M P PA V
Sbjct: 483 VGTQTMGPRPATAAAAAATPVRGVPQ-YKYAAGVRNPQQH----MNTQPQVTMQQPAVHV 537
Query: 537 ETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEV 596
+ P+ S LA+A P ++ +MLGE+L+PL++N+ P A K+TGMLLE+D +E+
Sbjct: 538 QGQEPL------TASMLAAAPPQEQKQMLGERLFPLIQNMHPSLAGKITGMLLEIDNSEL 591
Query: 597 LHLIESPEALKTKVAEAMAVLQ-----EAAARSDVN 627
LH++ESPE+L++KV EA+AVLQ EAA ++ N
Sbjct: 592 LHMLESPESLRSKVDEAVAVLQAHQAKEAAQKTVTN 627
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 171/298 (57%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I + V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGQPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN D ++DEKL+ELFS++G S +VM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+G S+G GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 NGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKLMYVGRAQKKVERQTELKRKFEQMK 284
>gi|350408506|ref|XP_003488427.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Bombus
impatiens]
Length = 621
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 294/625 (47%), Positives = 385/625 (61%), Gaps = 33/625 (5%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD +IDNKA+ DTF+AFG +LS
Sbjct: 68 ALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKVA D +G SKGYGFV FE EEAA +I +NGML+N K+VYVG F+ R+ER ++
Sbjct: 128 CKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFIPRKEREKELGEK 187
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ FTNVYV N E +TD+ LK +F +GTITS VM DGKSR FGFV F+ PDAA
Sbjct: 188 AKLFTNVYVKNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQ 247
Query: 263 AVEKLNGT-TNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV +LNG K YVGRAQK+AER+ +L+ KFEQ ++ R + +G NLY+KNLDDSI
Sbjct: 248 AVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSI 307
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DE+L++ F+ FGTITS KVM+++ G SKG GF FS PEEAT+A+ EMNG++I KPLY
Sbjct: 308 DDERLRKEFAPFGTITSAKVMMEE-GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLY 366
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSPLASGI-PG--YHHGAPRLGPQQLYYGQGTPG 438
VA+AQRKE+RKA L +Q+ Q A M + PG ++ P + Q +YG
Sbjct: 367 VALAQRKEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYFVPTIPQPQRFYG----- 421
Query: 439 LMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMR 498
P Q A Q + P P PN + P G R+ QP MR
Sbjct: 422 --PAQMA----QIRTTPRW-PAQPNQVRPNAQTGSSGFATMQGPFRAAPRAPTAQPGAMR 474
Query: 499 NSNQ--GIRYLDNARNGTDQSVVSMV-PVPFE-VSGMPATPVETPRPVPVPIS------- 547
+ G + + G V + P ++ S M P P P P+
Sbjct: 475 SQQTVGGANMQNRSMAGPAVGVTAQSRPSNYKYTSNMRNPPQAMAIPAPTPVQQAVHIQG 534
Query: 548 ---TLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPE 604
S LA+A P ++ +MLGE+L+PL++ + P K+TGMLLE+D +E+LH++E E
Sbjct: 535 QEPLTASMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSELLHMLEHNE 594
Query: 605 ALKTKVAEAMAVLQEAAARSDVNEK 629
+LK KV EA+AVLQ A+ V K
Sbjct: 595 SLKAKVEEAVAVLQAHQAKQAVASK 619
>gi|340719918|ref|XP_003398391.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Bombus
terrestris]
Length = 630
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 299/642 (46%), Positives = 393/642 (61%), Gaps = 58/642 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD +IDNKA+ DTF+AFG +LS
Sbjct: 68 ALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKVA D +G SKGYGFV FE EEAA +I +NGML+N K+VYVG F+ R+ER ++
Sbjct: 128 CKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFIPRKEREKELGEK 187
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ FTNVYV N E +TD+ LK++F +GTITS VM DGKSR FGFV F+ PDAA
Sbjct: 188 AKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQ 247
Query: 263 AVEKLNGT-TNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV +LNG K YVGRAQK+AER+ +L+ KFEQ ++ R + +G NLY+KNLDDSI
Sbjct: 248 AVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSI 307
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DE+L++ F+ FGTITS KVM+++ G SKG GF FS PEEAT+A+ EMNG++I KPLY
Sbjct: 308 DDERLRKEFAPFGTITSAKVMMEE-GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLY 366
Query: 382 VAVAQRKEERKARLQAQF------------AQIRAPGGMSPLASGIPGYHHGAPRLGPQQ 429
VA+AQRKE+RKA L +Q+ QI PGG +P GP Q
Sbjct: 367 VALAQRKEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYF--VPTIPQPQRFYGPAQ 424
Query: 430 LYYGQGTPGLMPPQ-----------AAGYGFQQQVF------PGLRPGGPNYIMPYHLQR 472
+ + TP P Q ++G+ Q F P +PG M L
Sbjct: 425 MAQIRTTP-RWPAQPNQVRPNAQTGSSGFATMQGPFRAAPRAPTAQPGA----MRSTLSA 479
Query: 473 QVHPGQRTGVRRSGNTHQMQQPQF-----MRNSNQGIRYLDNARNGTDQSVVSMVPVPFE 527
+ GQ+T + + M P R SN +Y N RN Q++ +P P
Sbjct: 480 RPITGQQTVGGANMQSRSMAGPAVGVSAQSRPSN--YKYTSNMRN-PPQAMA--IPTP-- 532
Query: 528 VSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
TPV+ + S LA+A P ++ +MLGE+L+PL++ + P K+TGM
Sbjct: 533 ------TPVQQAVHIQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGM 586
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEK 629
LLE+D +E+LH++E E+LK KV EA+AVLQ A+ V K
Sbjct: 587 LLEIDNSELLHMLEHNESLKAKVEEAVAVLQAHQAKQAVASK 628
>gi|72534835|ref|NP_001026846.1| poly A binding protein, cytoplasmic 1 a [Danio rerio]
gi|71534060|gb|AAH99992.1| Poly A binding protein, cytoplasmic 1 a [Danio rerio]
Length = 634
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 294/636 (46%), Positives = 396/636 (62%), Gaps = 37/636 (5%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+P+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER-AQQNVS 203
CKV D NG SKGYGFV FE EAA+ AI+ +NGML+ND++V+VG F R+ER A+
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEMGAR 186
Query: 204 PK-FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
K FTNVY+ N E + DE LK+IF +G S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTDDSGKSKGFGFVSFERHEDAQR 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD ++
Sbjct: 247 AVDEMNGKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLD 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRAPGG--MSPLASGIP-GYHHGA-PRLGPQQLYYGQ 434
A+AQRKEER+A L +Q+ Q +RA ++P P GY A P+ + YY
Sbjct: 366 ALAQRKEERQAHLTSQYMQRMASVRAVPNPVLNPYQPAPPSGYFMAAIPQAQNRAAYYPT 425
Query: 435 GTPG-LMP-PQAAGYGFQQQVFPGL-----RPGGP-----NYIMPYHLQRQVHPGQRTGV 482
L P P+ A G + Q F + RP P N + P ++ QR G
Sbjct: 426 SQLAQLRPSPRWATQGVRPQHFQNMPNAAVRPSAPRPQTFNPVRPASQVPRMMTSQRMGS 485
Query: 483 RRSGNTHQMQQPQFMRNSNQGI---RYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETP 539
+ G +G+ +Y RN Q + + VP + PA V+
Sbjct: 486 QAMGPRPAAAGAATGPAQVRGVPQYKYAPGVRN-PQQRMPTQPQVPMQ---QPAVHVQGQ 541
Query: 540 RPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHL 599
P+ S LA+A P ++ +MLGE+L+PL++N+ P A K+TGMLLE+D +E+LH+
Sbjct: 542 EPL------TASMLAAAPPQEQKQMLGERLFPLIQNMHPSLAGKITGMLLEIDNSELLHM 595
Query: 600 IESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLAV 635
+ESPE+L++KV EA+AVLQ A+ + + S AV
Sbjct: 596 LESPESLRSKVDEAVAVLQAHQAKEAAQKSVPSPAV 631
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 168/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I + V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA++ A+ ++ N+Y+KN + ++DEKLKE+F ++G S +VM D
Sbjct: 177 KEREAEMGARAKE----------FTNVYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTDD 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A RA++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQRAVDEMNGKEMNGKQVYVGRAQKKGERQTELKRKFEQMK 284
>gi|340719922|ref|XP_003398393.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3 [Bombus
terrestris]
Length = 621
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 294/625 (47%), Positives = 385/625 (61%), Gaps = 33/625 (5%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD +IDNKA+ DTF+AFG +LS
Sbjct: 68 ALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKVA D +G SKGYGFV FE EEAA +I +NGML+N K+VYVG F+ R+ER ++
Sbjct: 128 CKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFIPRKEREKELGEK 187
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ FTNVYV N E +TD+ LK++F +GTITS VM DGKSR FGFV F+ PDAA
Sbjct: 188 AKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQ 247
Query: 263 AVEKLNGT-TNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV +LNG K YVGRAQK+AER+ +L+ KFEQ ++ R + +G NLY+KNLDDSI
Sbjct: 248 AVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSI 307
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DE+L++ F+ FGTITS KVM+++ G SKG GF FS PEEAT+A+ EMNG++I KPLY
Sbjct: 308 DDERLRKEFAPFGTITSAKVMMEE-GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLY 366
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSPLASGI-PG--YHHGAPRLGPQQLYYGQGTPG 438
VA+AQRKE+RKA L +Q+ Q A M + PG ++ P + Q +YG
Sbjct: 367 VALAQRKEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYFVPTIPQPQRFYG----- 421
Query: 439 LMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMR 498
P Q A Q + P P PN + P G R+ QP MR
Sbjct: 422 --PAQMA----QIRTTPRW-PAQPNQVRPNAQTGSSGFATMQGPFRAAPRAPTAQPGAMR 474
Query: 499 NSNQ--GIRYLDNARNGTDQSVVSMV-PVPFE-VSGMPATPVETPRPVPVPIS------- 547
+ G + G V + P ++ S M P P P P+
Sbjct: 475 SQQTVGGANMQSRSMAGPAVGVSAQSRPSNYKYTSNMRNPPQAMAIPTPTPVQQAVHIQG 534
Query: 548 ---TLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPE 604
S LA+A P ++ +MLGE+L+PL++ + P K+TGMLLE+D +E+LH++E E
Sbjct: 535 QEPLTASMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSELLHMLEHNE 594
Query: 605 ALKTKVAEAMAVLQEAAARSDVNEK 629
+LK KV EA+AVLQ A+ V K
Sbjct: 595 SLKAKVEEAVAVLQAHQAKQAVASK 619
>gi|389610655|dbj|BAM18939.1| polyA-binding protein [Papilio polytes]
Length = 611
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 290/636 (45%), Positives = 385/636 (60%), Gaps = 58/636 (9%)
Query: 22 PSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQD 81
P Y SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P D
Sbjct: 5 PPNYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 64
Query: 82 AANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGT 141
A A E +NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD +IDNKA+ DTF+AFG
Sbjct: 65 AERALEGMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGN 124
Query: 142 VLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ- 200
+LSCKVA D G SKGYGFV FE EEAA +I+ +NGML+N K+VYVG F+ R+ER ++
Sbjct: 125 ILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKEL 184
Query: 201 -NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDA 259
+ FTNVYV N E +DE L+++F +G ITS VM DG SR FGFV F+ PDA
Sbjct: 185 GEKAKLFTNVYVKNFGEDFSDEMLREMFEKYGRITSHKVMYKEDGSSRGFGFVAFEDPDA 244
Query: 260 AAAAVEKLNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
A A +LNG + K YVGRAQK+AER+ +L+ KFEQ + R + +G NLY+KNLD
Sbjct: 245 AERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLD 304
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
D+I+DE+L++ F+ FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++G K
Sbjct: 305 DTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTK 363
Query: 379 PLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLAS-----GIPGYHHGAPRLGPQQLYYG 433
PLYVA+AQRKE+RKA L +Q+ Q A M + G GY P + P Q +YG
Sbjct: 364 PLYVALAQRKEDRKAHLTSQYMQRMASMRMQQMGQIFQPGGTGGYF--VPTIPPAQRFYG 421
Query: 434 QGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPY-HLQRQVHPGQR------------- 479
+ P + P +RP + Y ++Q P R
Sbjct: 422 PAQMTQIRPSP-----RWTAQPAVRPNAQSAASAYPNMQPPFRPAPRGPAQAALRSSMGA 476
Query: 480 ------TGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPA 533
GV + + PQ R + G +Y N RN P P PA
Sbjct: 477 RPITGQQGVATAASIRAPIVPQSGRPA--GYKYTSNMRN---------PPAP-----QPA 520
Query: 534 TPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQ 593
++ P+ T+ LA+A ++ +MLGE+L+PL++ + P A K+TGMLLE+D
Sbjct: 521 VHIQGQEPL------TTTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDN 574
Query: 594 TEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEK 629
+E+LH++E E+LK KV EA+AVLQ A+ +K
Sbjct: 575 SELLHMLEHGESLKAKVDEAVAVLQAHQAKQQATKK 610
>gi|350408504|ref|XP_003488426.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Bombus
impatiens]
Length = 630
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 299/643 (46%), Positives = 390/643 (60%), Gaps = 60/643 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD +IDNKA+ DTF+AFG +LS
Sbjct: 68 ALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKVA D +G SKGYGFV FE EEAA +I +NGML+N K+VYVG F+ R+ER ++
Sbjct: 128 CKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFIPRKEREKELGEK 187
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ FTNVYV N E +TD+ LK +F +GTITS VM DGKSR FGFV F+ PDAA
Sbjct: 188 AKLFTNVYVKNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQ 247
Query: 263 AVEKLNGT-TNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV +LNG K YVGRAQK+AER+ +L+ KFEQ ++ R + +G NLY+KNLDDSI
Sbjct: 248 AVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSI 307
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DE+L++ F+ FGTITS KVM+++ G SKG GF FS PEEAT+A+ EMNG++I KPLY
Sbjct: 308 DDERLRKEFAPFGTITSAKVMMEE-GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLY 366
Query: 382 VAVAQRKEERKARLQAQF------------AQIRAPGGMSPLASGIPGYHHGAPRLGPQQ 429
VA+AQRKE+RKA L +Q+ QI PGG +P GP Q
Sbjct: 367 VALAQRKEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYF--VPTIPQPQRFYGPAQ 424
Query: 430 LYYGQGTPGLMPPQ-----------AAGYGFQQQVF------PGLRPGGPNYIMPYHLQR 472
+ + TP P Q ++G+ Q F P +PG M L
Sbjct: 425 MAQIRTTP-RWPAQPNQVRPNAQTGSSGFATMQGPFRAAPRAPTAQPGA----MRSTLSA 479
Query: 473 QVHPGQRTGVRRSGNTHQMQQPQF-----MRNSNQGIRYLDNARNGTDQSVVSMVPVPFE 527
+ GQ+T + M P R SN +Y N RN P +
Sbjct: 480 RPITGQQTVGGANMQNRSMAGPAVGVTAQSRPSN--YKYTSNMRN------------PPQ 525
Query: 528 VSGMPA-TPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTG 586
+PA TPV+ + S LA+A P ++ +MLGE+L+PL++ + P K+TG
Sbjct: 526 AMAIPAPTPVQQAVHIQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITG 585
Query: 587 MLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEK 629
MLLE+D +E+LH++E E+LK KV EA+AVLQ A+ V K
Sbjct: 586 MLLEIDNSELLHMLEHNESLKAKVEEAVAVLQAHQAKQAVASK 628
>gi|389608229|dbj|BAM17726.1| polyA-binding protein [Papilio xuthus]
Length = 619
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 292/636 (45%), Positives = 385/636 (60%), Gaps = 58/636 (9%)
Query: 22 PSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQD 81
P Y SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P D
Sbjct: 5 PPNYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 64
Query: 82 AANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGT 141
A A E +NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD +IDNKA+ DTF AFG
Sbjct: 65 AERALEGMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFTAFGN 124
Query: 142 VLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ- 200
+LSCKVA D G SKGYGFV FE EEAA +I+ +NGML+N K+VYVG F+ R+ER ++
Sbjct: 125 ILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKEL 184
Query: 201 -NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDA 259
+ FTNVYV N E +DE L+++F +G ITS VM DG SR FGFV F+ PDA
Sbjct: 185 GEKAKLFTNVYVKNFGEDFSDEMLREMFEKYGRITSHKVMYKEDGSSRGFGFVAFEDPDA 244
Query: 260 AAAAVEKLNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
A A +LNG + K YVGRAQK+AER+ +L+ KFEQ + R + +G NLY+KNLD
Sbjct: 245 AERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLD 304
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
D+I+DE+L++ F+ FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++G K
Sbjct: 305 DTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTK 363
Query: 379 PLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLAS-----GIPGYHHGAPRLGPQQLYYG 433
PLYVA+AQRKE+RKA L +Q+ Q A M + G GY P + P Q +YG
Sbjct: 364 PLYVALAQRKEDRKAHLTSQYMQRMASMRMQQMGQIFQPGGTGGYF--VPTIPPAQRFYG 421
Query: 434 QGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPY-HLQRQVHPGQR------------- 479
P M + Q P +RP + Y ++Q P R
Sbjct: 422 ---PAQMTQIRPSPRWTAQ--PAVRPNAQSAASAYPNMQPPFRPAPRGPAQAALRSSMGA 476
Query: 480 ------TGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPA 533
GV + + PQ R + G +Y N RN P P PA
Sbjct: 477 RPITGQQGVATASSIRAPIVPQSGRPA--GYKYTSNMRN---------PPAP-----QPA 520
Query: 534 TPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQ 593
++ P+ T+ LA+A ++ +MLGE+L+PL++ + P A K+TGMLLE+D
Sbjct: 521 VHIQGQEPL------TTTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDN 574
Query: 594 TEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEK 629
+E+LH++E E+LK KV EA+AVLQ A+ +K
Sbjct: 575 SELLHMLEHGESLKAKVDEAVAVLQAHQAKQQATKK 610
>gi|380019828|ref|XP_003693803.1| PREDICTED: polyadenylate-binding protein 1-like [Apis florea]
Length = 630
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 291/631 (46%), Positives = 389/631 (61%), Gaps = 36/631 (5%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD +IDNKA+ DTF+AFG +LS
Sbjct: 68 ALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKVA D +G SKGYGFV FE EEAA +I +NGML+N K+VYVG F+ R+ER ++
Sbjct: 128 CKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFIPRKEREKELGEK 187
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ FTNVYV N E +TD+ LK++F +GTITS VM DGKSR FGFV F+ PDAA
Sbjct: 188 AKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQ 247
Query: 263 AVEKLNGT-TNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV +LNG K YVGRAQK+AER+ +L+ KFEQ ++ R + +G NLY+KNLDDSI
Sbjct: 248 AVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSI 307
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DE+L++ F+ FGTITS KVM+++ G SKG GF FS PEEAT+A+ EMNG++I KPLY
Sbjct: 308 DDERLRKEFAPFGTITSAKVMMEE-GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLY 366
Query: 382 VAVAQRKEERKARLQAQF------------AQIRAPGGMSPLASGIPGYHHGAPRLGPQQ 429
VA+AQRKE+RKA L +Q+ QI PGG +P GP Q
Sbjct: 367 VALAQRKEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYF--VPTIPQPQRFYGPAQ 424
Query: 430 LYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIM---PYHLQRQVHPGQRTGVRRSG 486
+ + TP P Q QV P + G + P+ + Q +R +
Sbjct: 425 MAQIRTTP-RWPAQP------NQVRPNAQTGSSGFATMQGPFRAAPRAPTAQAGTMRNTL 477
Query: 487 NTHQMQQPQFMRNSNQGIRYLDNARNG-------TDQSVVSMVPVPFEVSGMPA-TPVET 538
+ + Q + +N R + G ++ S + P + +PA TPV+
Sbjct: 478 SARPITGQQAVGGANMQNRSMAGPAVGVSAQSRPSNYKYTSNMRNPPQAMAIPAPTPVQQ 537
Query: 539 PRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLH 598
+ S LA+A P ++ +MLGE+L+PL++ + P K+TGMLLE+D +E+LH
Sbjct: 538 AVHIQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSELLH 597
Query: 599 LIESPEALKTKVAEAMAVLQEAAARSDVNEK 629
++E E+LK KV EA+AVLQ A+ V K
Sbjct: 598 MLEHNESLKAKVEEAVAVLQAHQAKQAVASK 628
>gi|91095037|ref|XP_975975.1| PREDICTED: similar to poly A binding protein isoform 4 [Tribolium
castaneum]
gi|270014772|gb|EFA11220.1| hypothetical protein TcasGA2_TC005185 [Tribolium castaneum]
Length = 607
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 290/620 (46%), Positives = 386/620 (62%), Gaps = 48/620 (7%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHTDITEAMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD SIDNKA+ DTF+AFG +LS
Sbjct: 68 ALDTMNFDLIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKVA D NG SKGYGFV FE EEAA +I+ +NGML+N K+VYVG F+ R+ER ++
Sbjct: 128 CKVAQDENGTSKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEK 187
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ FTNVYV N E +T+E L+ +F +G ITS +M DGKS+ FGFV F+SP+AA
Sbjct: 188 AKLFTNVYVKNFGEDLTEEQLRTMFEKYGKITSYKIMSKDDGKSKGFGFVAFESPEAAET 247
Query: 263 AVEKLNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AVE LNG D K YVGRAQK+AER+ +L+ +FE ++ R + +G NLY+KNLDD+I
Sbjct: 248 AVEALNGKEIIDGKPLYVGRAQKKAERQQELKRRFEALKMERLNRYQGVNLYVKNLDDTI 307
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DE+L++ FS FGTITS KVM++ + SKG GF FS PEEAT+A+ EMNG+++G KPLY
Sbjct: 308 DDERLRKEFSPFGTITSAKVMMEDNR-SKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLY 366
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSPLASGI-PGYHHG--APRLGPQQLYYGQG--- 435
VA+AQRKE+RKA L +Q+ Q A M + I PG G P + Q +YG
Sbjct: 367 VALAQRKEDRKAHLTSQYMQRMANIRMHQMGQFIQPGTSSGYFVPTIPAPQRFYGAAQMA 426
Query: 436 ---TPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVH------PGQRTGVRRSG 486
T P Q +RPG PY + P Q +R +
Sbjct: 427 QIRTNPRWPAQTP-----------VRPGAQGSANPYGTIPTTYRAAPRPPNQSAALRSNI 475
Query: 487 NTHQM---QQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVP 543
N + QQP ++ R Q+VV+ P +S A PV+ +
Sbjct: 476 NVPRPITGQQPPNIQ-----------GRPLASQAVVA--PAGLGISN--AAPVQQAVHIQ 520
Query: 544 VPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESP 603
+ LA+A P ++ +MLGE+L+PL++ + P A K+TGMLLE+D +E+LH++E
Sbjct: 521 GQEPLTATMLAAAPPQEQKQMLGERLFPLIQRMYPDLAGKITGMLLEIDNSELLHMLEHN 580
Query: 604 EALKTKVAEAMAVLQEAAAR 623
E+LK KV EA+AVLQ A+
Sbjct: 581 ESLKAKVEEAVAVLQAHQAK 600
>gi|328713207|ref|XP_001947071.2| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 630
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 289/632 (45%), Positives = 394/632 (62%), Gaps = 48/632 (7%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V E+ L++ FS V V+S+RVCRD R SLGYAYVN+ N DA A +
Sbjct: 3 SLYVGDLHSDVTEAMLFEKFSTVGAVLSIRVCRDMITRRSLGYAYVNFQNMADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF + G+P+RIM+S RDPS+RKSG GNVFIKNLD SIDNKA+ DTF+AFG +LSCKVA
Sbjct: 63 MNFDILKGRPMRIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D GQSKGYGFV FE E++A +I+ +NGML+N K+V+VG FV R++R ++ + +
Sbjct: 123 QDETGQSKGYGFVHFEMEQSATQSIEKVNGMLLNGKKVFVGRFVGRKDREKELGQKAKLY 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVY+ N+ E V D++L ++F +G+ITS VM DG SR FGFV F+ P+ A AV +
Sbjct: 183 TNVYIKNIDENVNDKELFEMFEKYGSITSFKVMFRDDGSSRGFGFVAFEDPEEAEKAVTE 242
Query: 267 LNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
L+G + + K +YVGRAQK+AER+ +L+ KFEQ +I R + +G NLY+KNLDD+I+DE+
Sbjct: 243 LHGKESPEGKTYYVGRAQKKAERQQELKRKFEQYKIERMNRYQGVNLYVKNLDDTIDDER 302
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L++ FS FGTITS KVM+D G SKG GF FS PEEAT+A+ +MNG+++G KPLYVA+A
Sbjct: 303 LRKEFSVFGTITSAKVMMDD-GRSKGFGFVCFSSPEEATKAVTDMNGRIVGTKPLYVALA 361
Query: 386 QRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGA------PRLGPQQLYYGQGTPGL 439
QRKE+RKA L +Q+ Q M + P Y GA P + Q +YG
Sbjct: 362 QRKEDRKAHLDSQYLQRNTNMRMQSIG---PIYQPGASSGYFVPTIPQPQRFYGPTQMTQ 418
Query: 440 MPPQAAGYGFQQQVFPGL----RPGGPNYIMPYH---LQRQVHPGQRTGVRRSG------ 486
+ PQ + Q QV G G PN Y + V GQ+ + R+
Sbjct: 419 IRPQPR-WASQPQVRAGTPQAAAAGYPNMATQYRNIGARAPVPAGQQAALARNAMVDRNA 477
Query: 487 ---NTHQMQQPQFM----------RNSNQGIRYLDNARN--GTDQSVVSMVPVPFEVSGM 531
+T Q Q P + R + G +Y N RN G Q + P G
Sbjct: 478 RPISTAQQQMPGAVAAGGVRVPGARGTGSGYKYTANMRNPPGQAQGMGQAQP------GQ 531
Query: 532 PATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEM 591
P PV+ V + LA+A P+D+ +MLGE+L+PL++ + P K+TGMLLE+
Sbjct: 532 PPAPVQAAVHVHGQEPLTATMLATAKPEDQKQMLGERLFPLIQRMYPELTGKITGMLLEI 591
Query: 592 DQTEVLHLIESPEALKTKVAEAMAVLQEAAAR 623
D +++LH++E E+LK KV E +AVLQ A+
Sbjct: 592 DNSDLLHMLEHHESLKNKVEEVVAVLQAHQAQ 623
>gi|26354649|dbj|BAC40951.1| unnamed protein product [Mus musculus]
Length = 636
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 296/648 (45%), Positives = 393/648 (60%), Gaps = 64/648 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AIK +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIKKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK++FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYY 423
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTG 481
P Q+ + +P A + FQ PG +RP P P+ R P +
Sbjct: 424 PPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMST 479
Query: 482 VRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFE 527
R + + Q P+ +R Q +Y RN Q V+M
Sbjct: 480 QRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM------ 532
Query: 528 VSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGM
Sbjct: 533 --QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGM 584
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
LLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 585 LLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 632
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A++K+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIKKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LKELF +FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|301756358|ref|XP_002914026.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 636
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 294/648 (45%), Positives = 394/648 (60%), Gaps = 64/648 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+R+CRD+ R SLGYAYVNY P+D+
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPRDSER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYY 423
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTG 481
P Q+ + +P A + FQ PG +RP P P+ R P +
Sbjct: 424 PPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMST 479
Query: 482 VRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFE 527
R + + Q P+ +R Q +Y RN Q V+M
Sbjct: 480 QRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM------ 532
Query: 528 VSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGM
Sbjct: 533 --QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGM 584
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
LLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 585 LLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 632
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS ++ D +S GY +V ++
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
++ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PRDSERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|19526272|gb|AAL89666.1|AF411956_7 polyA-binding protein [Takifugu rubripes]
Length = 623
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 307/642 (47%), Positives = 402/642 (62%), Gaps = 66/642 (10%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ LY+ FS V+S+RVCRD R SLGYAYVN+S P DA
Sbjct: 8 YPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF + GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGY FV FE ++AA AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N + + DE LK++F +G S VM D GKSR FGFV+++ + A
Sbjct: 187 AKEFTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGKSRGFGFVSYEKHEDANK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDD 319
AVE +NGT N K +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+KNLDD
Sbjct: 247 AVEDMNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQERISRYQ---GVNLYIKNLDD 303
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
+I+DEKL++ FS FG+ITS KVM+++ G SKG GF FS PEEAT+A+ EMNG+++G KP
Sbjct: 304 TIDDEKLRKEFSPFGSITSAKVMLEE-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKP 362
Query: 380 LYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGI-------PGYHHGA-PRLGPQQLY 431
LYVA+AQRKEERKA L Q+ Q R G + A+ I GY A P+ + Y
Sbjct: 363 LYVALAQRKEERKAHLTNQYMQ-RIAGMRAMPANTIINQFQPTSGYFMPAVPQAQNRTTY 421
Query: 432 YGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQM 491
Y M P + G MP L+ PG R GN QM
Sbjct: 422 YAPNQLAQMRPNPR--------WQQQGGRGGFQGMPNTLR---QPGPR------GNMRQM 464
Query: 492 QQPQFMRNSNQGIRYLDNARNGTDQSVV---SM-VPVPFEVSGMP-ATPVETPRP-VPVP 545
+S+QG R G+ Q++ SM VP P V+ AT V P P V P
Sbjct: 465 TP----NSSSQGPR-------GSAQTMAPRPSMGVPGPRNVTPYKYATGVRNPNPQVVQP 513
Query: 546 IST------------LT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMD 592
I+ LT S LA+A P ++ +MLGE+L+PL++ + A K+TGMLLE+D
Sbjct: 514 IALQQPAVHVQGQEPLTPSMLAAAPPQEQKQMLGERLFPLIQAMHANLAGKITGMLLEID 573
Query: 593 QTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
+E+LH++ES E+L++KV EA+AVLQ A+ D +K G++A
Sbjct: 574 NSELLHMLESHESLRSKVEEAVAVLQAHQAKKDATQKAGNMA 615
>gi|451798952|gb|AGF69179.1| polyadenylate-binding protein 2-like protein, partial [Triticum
aestivum]
Length = 497
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 285/509 (55%), Positives = 347/509 (68%), Gaps = 32/509 (6%)
Query: 106 RDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFEN 165
RDPS R+SG N+FIKNLD +IDNK L DTF+AFG +LSCKVA+D GQSKG+GFVQ+E
Sbjct: 1 RDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEK 60
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
EE+AQ+A+K LNGMLINDK VYVG F+R+QER KF NV+V NL+E+ T +DL K
Sbjct: 61 EESAQSAMKSLNGMLINDKPVYVGPFLRKQERDNSFDKAKFNNVFVKNLSESTTKDDLVK 120
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
+F +GTITSA+VM DGKSRCF FVNF+SPD AA AVE+LNG NDK WYVGRAQK+
Sbjct: 121 VFSGYGTITSAVVMIGMDGKSRCFDFVNFESPDDAARAVEELNGKKINDKEWYVGRAQKK 180
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
+ERE DL+ +FEQ +K +G NLYLKNLDD I D++L+ELFS FG ITSCK+M DQ
Sbjct: 181 SEREMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQ 240
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAP 405
+G SKGSGF +FS EEA++AL EMNGKMI KPLYVA AQRKE+RKA LQAQF+Q+R P
Sbjct: 241 NGVSKGSGFVSFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKAMLQAQFSQMR-P 299
Query: 406 GGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGG--- 461
M+P + +P Y P LG QQL+YGQ M P GYGFQQQ+ PG+RPGG
Sbjct: 300 VPMTPSMTPRLPMYPP-MPTLG-QQLFYGQAP-PAMMPPQPGYGFQQQLVPGMRPGGGAH 356
Query: 462 -PNYIMPYHLQRQVHPGQ---RTGVRRSG------------NTHQMQQPQFMRNSNQGIR 505
PNY +P V PGQ R G+RR+G QM + G R
Sbjct: 357 MPNYFVPV-----VQPGQQGPRPGIRRNGPGSAQGQQTPQPFQQQMVPRGCVYRYPPGPR 411
Query: 506 YLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRML 565
++ + V MV P+++ P P P PI TLTSALA+A+P+ + +L
Sbjct: 412 HMPEVQQMPGVGVGGMV-QPYDMGSFPVRDAGV-SPAP-PIGTLTSALANATPEQQRTIL 468
Query: 566 GEQLYPLVENIEPVHASKVTGMLLEMDQT 594
GE LYPLVE +E A+KVTGMLLEMDQT
Sbjct: 469 GESLYPLVEKLEHQQAAKVTGMLLEMDQT 497
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 170/291 (58%), Gaps = 17/291 (5%)
Query: 26 GNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANA 85
G+ ++++ +L++ ++ L+D FS ++S +V D +S G+ +V Y + A +A
Sbjct: 9 GSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSK-GFGFVQYEKEESAQSA 67
Query: 86 KEALNFMPINGKPIRI----MYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGT 141
++LN M IN KP+ + RD S K+ + NVF+KNL S L F+ +GT
Sbjct: 68 MKSLNGMLINDKPVYVGPFLRKQERDNSFDKAKFNNVFVKNLSESTTKDDLVKVFSGYGT 127
Query: 142 VLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL----------F 191
+ S V I +G+S+ + FV FE+ + A A++ LNG INDK+ YVG
Sbjct: 128 ITSAVVMIGMDGKSRCFDFVNFESPDDAARAVEELNGKKINDKEWYVGRAQKKSEREMDL 187
Query: 192 VRRQERAQQNVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCF 249
RR E++ ++ + K+ N+Y+ NL + +TD+ L+++F +FG ITS +M+D +G S+
Sbjct: 188 KRRFEQSMKDAADKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGS 247
Query: 250 GFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQER 300
GFV+F + + A+ A+ ++NG + K YV AQ++ +R+A L+A+F Q R
Sbjct: 248 GFVSFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKAMLQAQFSQMR 298
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y +LY+ +L+ + + QL +LFS ++ S ++ RDQ+ S G +V++S ++A+
Sbjct: 202 YQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSK-GSGFVSFSTREEASQ 260
Query: 85 AKEALNFMPINGKPIRIMYSHR 106
A +N I+GKP+ + ++ R
Sbjct: 261 ALTEMNGKMISGKPLYVAFAQR 282
>gi|307165845|gb|EFN60208.1| Polyadenylate-binding protein 1 [Camponotus floridanus]
Length = 635
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 298/648 (45%), Positives = 391/648 (60%), Gaps = 65/648 (10%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD +IDNKA+ DTF+AFG +LS
Sbjct: 68 ALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKVA D +G SKGYGFV FE EEAA +I +NGML+N K+VYVG F+ R+ER ++
Sbjct: 128 CKVAQDESGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEK 187
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ FTNVYV N E +TD+ LK++F +GTITS VM DGKSR FGFV F+ PDAA
Sbjct: 188 AKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMSKDDGKSRGFGFVAFEDPDAAEQ 247
Query: 263 AVEKLNGT-TNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV +LNG + K YVGRAQK+AER+ +L+ KFEQ +I R + +G NLY+KNLDD+I
Sbjct: 248 AVLELNGKDISEGKCMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYVKNLDDTI 307
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DE+L++ F+ FGTITS KVM+++ G SKG GF FS PEEAT+A+ EMNG+++G KPLY
Sbjct: 308 DDERLRKEFTPFGTITSAKVMMEE-GRSKGFGFVCFSQPEEATKAVTEMNGRIVGSKPLY 366
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGA---PRLGPQQLYYGQGTPG 438
VA+AQRKE+RKA L +Q+ Q A M + + G+ P L Q +YG
Sbjct: 367 VALAQRKEDRKAHLASQYMQRMANVRMQQMGQIFQPGNAGSYFVPTLPQPQRFYG----- 421
Query: 439 LMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMR 498
P Q A Q + P P PN QV P +TG + R
Sbjct: 422 --PAQMA----QIRATPRW-PAQPN---------QVRPNAQTGNSGFASMQSAPFRAAPR 465
Query: 499 NSNQGIRYLDN---ARNGTDQSVV--------SMV------------PVPFEVSGMPATP 535
L N AR T Q V SM P ++ + P
Sbjct: 466 APAAQAGALRNSMSARPITGQQAVGGANMQSRSMAGPAVGVSPGQSRPPNYKYTANMRNP 525
Query: 536 VETPRPVPVPI-------------STLTSA-LASASPDDRTRMLGEQLYPLVENIEPVHA 581
+T +P P LT++ LA+A P ++ +MLGE+L+PL++ + P
Sbjct: 526 PQTAMALPAPSGPSVQQAVHIQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQCMYPSLT 585
Query: 582 SKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEK 629
K+TGMLLE+D +E+LH++E E+LK KV EA+AVLQ A+ V K
Sbjct: 586 GKITGMLLEIDNSELLHMLEHNESLKAKVEEAVAVLQAHQAKQAVAPK 633
>gi|449268618|gb|EMC79472.1| Polyadenylate-binding protein 4 [Columba livia]
Length = 630
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 297/642 (46%), Positives = 395/642 (61%), Gaps = 50/642 (7%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 6 SSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AFG +
Sbjct: 66 ERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNI 125
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKV D NG SKGY FV FE ++AA AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 126 LSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +FTNVY+ N + + DE LK++F +G S VM D GKS+ FGFV+F+ + A
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEKHEDA 244
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNL 317
AVE++NG N K+ +VGRAQK+ ER+A+L+ KFE QER+SRY+ G NLY+KNL
Sbjct: 245 NKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERLSRYQ---GVNLYIKNL 301
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
DD+I+DEKL++ FS FG ITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++G
Sbjct: 302 DDTIDDEKLRKEFSPFGAITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 378 KPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPL-----------ASGIPGYHHGA-PRL 425
KPLYVA+AQRKEERKA L Q+ Q A GM L A+G GY A P+
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRIA--GMRALPANTIINQFQPAAG--GYFMPAVPQA 416
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRS 485
+ YY P M +QQ P G PN + RQ P R +R
Sbjct: 417 QSRPTYYA---PNQMTQMRPNPRWQQGGRPQGFQGMPNAM------RQSGP--RPALRHL 465
Query: 486 GNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVP 545
+ + + Q + A+N + V+ A+ V +P P P
Sbjct: 466 APAGSAPASRGLPAAAQRVGVGTAAQNLGPRPPVAAPAPRAVPPYKYASSVRSPHPAVQP 525
Query: 546 IST-------------LTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMD 592
+ S LA+A P ++ +MLGE+L+PL++ + P A K+TGMLLE+D
Sbjct: 526 LQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEID 585
Query: 593 QTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
+E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G +A
Sbjct: 586 NSELLHMLESPESLRSKVEEAVAVLQAHQAKKEAAQKVGVVA 627
>gi|291388359|ref|XP_002710763.1| PREDICTED: poly A binding protein, cytoplasmic 4 [Oryctolagus
cuniculus]
Length = 636
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 297/652 (45%), Positives = 394/652 (60%), Gaps = 64/652 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYY 423
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTG 481
P Q+ + +P A + FQ PG +RP P P+ R P +
Sbjct: 424 PPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMST 479
Query: 482 VRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFE 527
R + + Q P+ +R Q +Y RN Q V+M
Sbjct: 480 QRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM------ 532
Query: 528 VSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGM
Sbjct: 533 --QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGM 584
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLGSLAV 635
LLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G AV
Sbjct: 585 LLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATGVPAV 636
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|410904819|ref|XP_003965889.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 636
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 292/629 (46%), Positives = 393/629 (62%), Gaps = 45/629 (7%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+P+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGRPLRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK++F +G S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AREFTNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDDGGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+ +NG N + YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD ++
Sbjct: 247 AVDDMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLD 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRAPGG--MSPLASGIP-GYHHGA-PRLGPQQLYYGQ 434
A+AQRKEER+A L Q+ Q +RA ++P P GY A P+ + YY
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMATVRAVPNPVLNPYQPAPPSGYFMAAIPQTQNRAAYYSA 425
Query: 435 GTPG-LMP-PQAAGYGFQQQVF---PG-LRPGGP--------------NYIMPYHLQRQV 474
L P P+ G + Q F PG +RP P N +P + Q
Sbjct: 426 NQLAQLRPSPRWTTQGVRPQHFQNMPGAMRPSAPRPQALNAIRPTAAGNAQVPRMMASQR 485
Query: 475 HPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPAT 534
P Q G R +G + P +R Q +Y RN Q + S VP + PA
Sbjct: 486 MPAQTLGQRAAGASTTAAAP--VRTMPQ-YKYAAGVRN-PQQHMASQPQVPMQ---QPAV 538
Query: 535 PVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQT 594
V+ P+ S LASA P ++ +MLGE+L+PL++++ P A K+TGMLLE+D +
Sbjct: 539 LVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQDVHPSLAGKITGMLLEIDNS 592
Query: 595 EVLHLIESPEALKTKVAEAMAVLQEAAAR 623
E+LH++ESPE+L++K+ EA+AVLQ A+
Sbjct: 593 ELLHMLESPESLRSKMDEAVAVLQAHQAK 621
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 168/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I + + + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPLRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ + N+Y+KN + ++DEKLKELFS++G S +VM D
Sbjct: 177 KEREAELGARARE----------FTNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDD 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A+++MNGK + + +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 GGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMK 284
>gi|193787802|dbj|BAG53005.1| unnamed protein product [Homo sapiens]
Length = 636
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 295/648 (45%), Positives = 391/648 (60%), Gaps = 64/648 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKDLFGKFGAALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD IN
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIN 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYY 423
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTG 481
P Q+ + +P A + FQ PG +RP P P+ R P +
Sbjct: 424 PPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMST 479
Query: 482 VRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFE 527
R + + Q P+ +R Q +Y RN Q V+M
Sbjct: 480 QRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM------ 532
Query: 528 VSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
PA + P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGM
Sbjct: 533 --QQPAVHAQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGM 584
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
LLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 585 LLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 632
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKDLFGKFGAALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|31560656|ref|NP_032800.2| polyadenylate-binding protein 1 [Mus musculus]
gi|341941223|sp|P29341.2|PABP1_MOUSE RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|13278026|gb|AAH03870.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|15029950|gb|AAH11207.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|18606321|gb|AAH23145.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|26336853|dbj|BAC32110.1| unnamed protein product [Mus musculus]
gi|29145018|gb|AAH46233.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|74144576|dbj|BAE36120.1| unnamed protein product [Mus musculus]
gi|74145579|dbj|BAE36203.1| unnamed protein product [Mus musculus]
gi|74179929|dbj|BAE36522.1| unnamed protein product [Mus musculus]
gi|74198265|dbj|BAE35302.1| unnamed protein product [Mus musculus]
gi|74198320|dbj|BAE35327.1| unnamed protein product [Mus musculus]
gi|74214225|dbj|BAE40360.1| unnamed protein product [Mus musculus]
gi|74223327|dbj|BAE21553.1| unnamed protein product [Mus musculus]
gi|148676871|gb|EDL08818.1| poly A binding protein, cytoplasmic 1 [Mus musculus]
Length = 636
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 295/648 (45%), Positives = 393/648 (60%), Gaps = 64/648 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK++FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYY 423
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTG 481
P Q+ + +P A + FQ PG +RP P P+ R P +
Sbjct: 424 PPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMST 479
Query: 482 VRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFE 527
R + + Q P+ +R Q +Y RN Q V+M
Sbjct: 480 QRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM------ 532
Query: 528 VSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGM
Sbjct: 533 --QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGM 584
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
LLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 585 LLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 632
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LKELF +FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|41386798|ref|NP_776993.1| polyadenylate-binding protein 1 [Bos taurus]
gi|46367787|ref|NP_002559.2| polyadenylate-binding protein 1 [Homo sapiens]
gi|383872540|ref|NP_001244826.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|73974130|ref|XP_856708.1| PREDICTED: polyadenylate-binding protein 1 isoform 6 [Canis lupus
familiaris]
gi|194036975|ref|XP_001927782.1| PREDICTED: polyadenylate-binding protein 1 [Sus scrofa]
gi|332213999|ref|XP_003256115.1| PREDICTED: polyadenylate-binding protein 1 [Nomascus leucogenys]
gi|344273312|ref|XP_003408467.1| PREDICTED: polyadenylate-binding protein 1-like [Loxodonta
africana]
gi|402878853|ref|XP_003903080.1| PREDICTED: polyadenylate-binding protein 1 [Papio anubis]
gi|3183544|sp|P11940.2|PABP1_HUMAN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|47117093|sp|P61286.1|PABP1_BOVIN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|1562511|gb|AAD08718.1| poly(A)-binding protein [Homo sapiens]
gi|8979741|emb|CAB96752.1| polyadenylate-binding protein 1 [Bos taurus]
gi|16358990|gb|AAH15958.1| PABPC1 protein [Homo sapiens]
gi|23270713|gb|AAH23520.1| Poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
gi|74268035|gb|AAI02366.1| Poly(A) binding protein, cytoplasmic 1 [Bos taurus]
gi|119612221|gb|EAW91815.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|119612223|gb|EAW91817.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|123993665|gb|ABM84434.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|123999981|gb|ABM87499.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|168278070|dbj|BAG11013.1| polyadenylate-binding protein 1 [synthetic construct]
gi|296480464|tpg|DAA22579.1| TPA: polyadenylate-binding protein 1 [Bos taurus]
gi|380811722|gb|AFE77736.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940022|gb|AFI33616.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940024|gb|AFI33617.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 636
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 295/648 (45%), Positives = 392/648 (60%), Gaps = 64/648 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYY 423
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTG 481
P Q+ + +P A + FQ PG +RP P P+ R P +
Sbjct: 424 PPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMST 479
Query: 482 VRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFE 527
R + + Q P+ +R Q +Y RN Q V+M
Sbjct: 480 QRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM------ 532
Query: 528 VSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGM
Sbjct: 533 --QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGM 584
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
LLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 585 LLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 632
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|291408596|ref|XP_002720594.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oryctolagus cuniculus]
Length = 614
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 292/638 (45%), Positives = 386/638 (60%), Gaps = 58/638 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+ KSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLHKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYY 423
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTG 481
P Q+ + +P A + FQ PG +RP P P+ R P +
Sbjct: 424 PPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMST 479
Query: 482 VRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRP 541
R + + Q P R + R T Q PA V+ P
Sbjct: 480 QRVANTSTQTMGP---RPAAAAAAATPAVRTVTMQQ--------------PAVHVQGQEP 522
Query: 542 VPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIE 601
+ S LASA P ++ +MLGE+L+PL++ + P A K+TGMLLE+D +E+LH++E
Sbjct: 523 L------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLE 576
Query: 602 SPEALKTKVAEAMAVLQ----EAAARSDVNEKLGSLAV 635
SPE+L++KV EA+AVLQ + AA+ VN G AV
Sbjct: 577 SPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATGVPAV 614
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLHKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|224046575|ref|XP_002200268.1| PREDICTED: polyadenylate-binding protein 1 [Taeniopygia guttata]
Length = 637
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 299/653 (45%), Positives = 403/653 (61%), Gaps = 54/653 (8%)
Query: 19 AAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSN 78
A+ PS Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+
Sbjct: 3 ASAPS-YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 79 PQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAA 138
P DA A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+A
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSA 121
Query: 139 FGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA 198
FG +LSCKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER
Sbjct: 122 FGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE 180
Query: 199 QQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQS 256
+ + +FTNVY+ N E + DE LK++FG FG S VM D GKS+ FGFV+F+
Sbjct: 181 AELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFER 240
Query: 257 PDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
+ A AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KN
Sbjct: 241 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKN 300
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
LDD I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++
Sbjct: 301 LDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVA 359
Query: 377 RKPLYVAVAQRKEERKARLQAQFAQ----IRAPGG--MSPLASGIP-GYHHGA-PRLGPQ 428
KPLYVA+AQRKEER+A L Q+ Q +RA ++P P GY A P+ +
Sbjct: 360 TKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNR 419
Query: 429 QLYY--------GQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---P 476
YY + +P A + FQ PG +RP P P+ R P
Sbjct: 420 AAYYPTNQLAQLARPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVP 475
Query: 477 GQRTGVRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTDQSVVSMVPVPF 526
+ R + + Q P+ +R Q +Y RN Q + + V
Sbjct: 476 RVMSTQRVANTSTQTMGPRPAAAATAATPAVRTVPQ-YKYAAGVRN-PQQHLNTQPQVAM 533
Query: 527 EVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTG 586
+ PA V+ P+ S LASA P ++ +MLGE+L+PL++++ P A K+TG
Sbjct: 534 Q---QPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQSMHPTLAGKITG 584
Query: 587 MLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLGSLAV 635
MLLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G +V
Sbjct: 585 MLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNNPTGVPSV 637
>gi|19705459|ref|NP_599180.1| polyadenylate-binding protein 1 [Rattus norvegicus]
gi|47605941|sp|Q9EPH8.1|PABP1_RAT RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|12188891|emb|CAC21554.1| poly(A) binding protein [Rattus norvegicus]
gi|52789215|gb|AAH83176.1| Poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus]
gi|149066519|gb|EDM16392.1| rCG60104 [Rattus norvegicus]
Length = 636
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 295/648 (45%), Positives = 393/648 (60%), Gaps = 64/648 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK++FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYY 423
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTG 481
P Q+ + +P A + FQ PG +RP P P+ R P +
Sbjct: 424 PPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMST 479
Query: 482 VRRSGNTHQMQQPQF----------MRNSNQGIRYLDNARNGTD----QSVVSMVPVPFE 527
R + + Q P+ +R Q +Y RN Q V+M
Sbjct: 480 QRVANTSTQTMGPRPAAAATAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM------ 532
Query: 528 VSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGM
Sbjct: 533 --QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGM 584
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
LLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 585 LLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 632
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LKELF +FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|126330205|ref|XP_001365269.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Monodelphis
domestica]
Length = 630
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 297/651 (45%), Positives = 389/651 (59%), Gaps = 86/651 (13%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 6 SSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AFG +
Sbjct: 66 ERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNI 125
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKV D NG SKGY FV FE ++AA AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 126 LSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +FTNVY+ N + + D LK++F +G S VM D GKS+ FGFV+F+ + A
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGKSKGFGFVSFEKHEDA 244
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNL 317
AVE++NG N K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+KNL
Sbjct: 245 NKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYIKNL 301
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
DD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS P+EAT+A+ EMNG+++G
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPDEATKAVTEMNGRIVGS 360
Query: 378 KPLYVAVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHH 420
KPLYVA+AQRKEERKA L Q+ Q +RA PGG +P +
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPTPGGY--FMPAVPQAQN 418
Query: 421 GAPRLGPQQLYYGQGTPGLMPPQAAGY--GFQQQVFPGLRPGGPNYIM---PYHLQRQVH 475
P P Q+ + P Q G GFQ G PN I P R +
Sbjct: 419 RPPYYAPNQIAQMRPNPRW---QQGGRPQGFQ---------GVPNTIRQSGPRPALRHLT 466
Query: 476 PGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMP--- 532
P T R T PQ R G +V ++ P P + P
Sbjct: 467 PASNTQASRGLPT----TPQ---------------RVGVPTAVQNLSPRPSVATPAPRAV 507
Query: 533 -----ATPVETPRPVPVPIST-------------LTSALASASPDDRTRMLGEQLYPLVE 574
A V +P P P+ T S LA+A P ++ +MLGE+L+PL++
Sbjct: 508 PPYKYAANVRSPHPAIQPLQTPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQ 567
Query: 575 NIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSD 625
+ A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ +
Sbjct: 568 TMHNNLAGKITGMLLEIDNSELLHMLESPESLRSKVEEAVAVLQAHHAKKE 618
>gi|387017716|gb|AFJ50976.1| Polyadenylate-binding protein 1-like [Crotalus adamanteus]
Length = 636
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 302/645 (46%), Positives = 402/645 (62%), Gaps = 50/645 (7%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK++FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRAPGG--MSPLASGIP-GYHHGA-PRLGPQQLYY-- 432
A+AQRKEER+A L Q+ Q +RA ++P P GY A P+ + YY
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRAAYYPT 425
Query: 433 GQGTPGLMPPQAAGYGFQQQVF---PG-LRPGGPNYIMPYHLQRQVHPGQRTGV---RRS 485
Q T P+ A G + F PG +RP P P+ R Q T V +R
Sbjct: 426 SQITQLRPSPRWAAQGARPHPFQNMPGAIRPTAPR--PPFSTMRPAS-SQVTRVMSTQRV 482
Query: 486 GNTH-QMQQPQ----------FMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPAT 534
NT Q P+ +R +Q +Y RN Q + + V + PA
Sbjct: 483 ANTSTQTMGPRPAAAAAAATPAVRTVSQ-YKYAAGVRN-PQQHLNTQPQVAMQ---QPAV 537
Query: 535 PVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQT 594
V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGMLLE+D +
Sbjct: 538 HVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNS 591
Query: 595 EVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLGSLAV 635
E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G +V
Sbjct: 592 ELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNNPAGVPSV 636
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LKELF +FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|71896197|ref|NP_001026768.1| polyadenylate-binding protein 1 [Gallus gallus]
gi|53130422|emb|CAG31540.1| hypothetical protein RCJMB04_7l20 [Gallus gallus]
Length = 637
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 297/647 (45%), Positives = 399/647 (61%), Gaps = 53/647 (8%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK++FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQKR ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKRVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRAPGG--MSPLASGIP-GYHHGA-PRLGPQQLYY-- 432
A+AQRKEER+A L Q+ Q +RA ++P P GY A P+ + YY
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRAAYYHT 425
Query: 433 ------GQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTGV 482
+ +P A + FQ PG +RP P P+ R P +
Sbjct: 426 NQLAQLARPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMSTQ 481
Query: 483 RRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMP 532
R + + Q P+ +R Q +Y RN Q + + V + P
Sbjct: 482 RVANTSTQTMGPRPAAAATAATPAVRTVPQ-YKYAAGVRN-PQQHLNTQPQVAMQ---QP 536
Query: 533 ATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMD 592
A V+ P+ S LASA P ++ +MLGE+L+PL++++ P A K+TGMLLE+D
Sbjct: 537 AVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQSMHPTLAGKITGMLLEID 590
Query: 593 QTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLGSLAV 635
+E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G +V
Sbjct: 591 NSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNNPTGVPSV 637
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 166/299 (55%), Gaps = 25/299 (8%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ ++ +L+++++ LYD FS ++S +V D++ S GY +V++ + A
Sbjct: 96 SGVGNI--FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAA 151
Query: 83 ANAKEALNFMPINGKPIRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDTF 136
A E +N M +N + + + R+ + R + NV+IKN +D++ L + F
Sbjct: 152 ERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELF 211
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG LS KV D +G+SKG+GFV FE E AQ A+ +NG +N KQ+YVG +R E
Sbjct: 212 GKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKRVE 271
Query: 197 RAQQNVSPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
R Q + KF N+YV NL + + DE L+K F FGTITSA VM +
Sbjct: 272 R-QTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG- 329
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
G+S+ FGFV F SP+ A AV ++NG K YV AQ++ ER+A L ++ Q S
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMAS 388
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LKELF +FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ++ ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKRVERQTELKRKFEQMK 284
>gi|156554126|ref|XP_001604025.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Nasonia
vitripennis]
Length = 627
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 291/642 (45%), Positives = 388/642 (60%), Gaps = 59/642 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDAVTRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+PIRIM+S RDPS+R+SG GNVFIKNLD +IDNKA+ DTF+AFG +LS
Sbjct: 68 ALDTMNFDIIKGRPIRIMWSQRDPSLRRSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
C+VA D +G SKGYGFV FE EEAA +I +NGML+N K+VYVG F+ R+ER ++
Sbjct: 128 CRVAQDESGSSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFISRKEREKELGEK 187
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ FTNVYV N E +TD+ LK++F +GTITS VM DGKSR FGFV F+ P+AA
Sbjct: 188 AKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMSKDDGKSRGFGFVAFEDPNAADR 247
Query: 263 AVEKLNGT-TNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV LNG K+ YVGRAQK+AER+ +L+ KFEQ +I R + +G NLY+KNLDD+I
Sbjct: 248 AVADLNGKEIAEGKIMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYVKNLDDTI 307
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DE+L++ F+ FGTITS KVM++ G SKG GF FS+ EEAT+A+ EMNG+++G KPLY
Sbjct: 308 DDERLRKEFAPFGTITSVKVMMED-GRSKGFGFVCFSLAEEATKAVTEMNGRIVGSKPLY 366
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSPL-----ASGIPGYHHGAPRLGPQQLYYGQGT 436
VA+AQRKE+RKA L +Q+ Q A M + A G Y P L Q +YG
Sbjct: 367 VALAQRKEDRKAHLASQYLQRVANIRMQHMGQVFQAGGAGSYF--VPTLPQPQRFYG--- 421
Query: 437 PGLMPPQAAGYGFQ-----QQVFPGLRPGGPNYI---MPYHLQRQVHPGQRTGVRRSGN- 487
P Q A Q V P + G N+ P+ + Q + R + +
Sbjct: 422 ----PAQMAQIRTTPRWPAQPVRPNAQAAGSNFATMQTPFRAAPRAPTAQSSMARNALSA 477
Query: 488 ---THQMQQPQFMRNSNQGI----------------RYLDNARNGTDQSVVSMVPVPFEV 528
T Q P N+ + +Y N RN P +
Sbjct: 478 RPITGQQAVPGAANMQNRSMAGPAVGVSPQSRTSNYKYTANMRN------------PPQT 525
Query: 529 SGMPA-TPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
MPA TP + + S LA A P ++ +MLGE+L+PL++ + P K+TGM
Sbjct: 526 MAMPAQTPAQQAVHIQGQEPLTASMLADAPPQEQKQMLGERLFPLIQCMYPHLTGKITGM 585
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEK 629
LLE+D +E+LH++E E+LK KV EA+AVLQ A+ V ++
Sbjct: 586 LLEIDNSELLHMLEHGESLKAKVEEAVAVLQAHQAKQAVKKE 627
>gi|126330207|ref|XP_001365338.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Monodelphis
domestica]
Length = 614
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 299/639 (46%), Positives = 395/639 (61%), Gaps = 78/639 (12%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 6 SSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AFG +
Sbjct: 66 ERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNI 125
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKV D NG SKGY FV FE ++AA AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 126 LSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +FTNVY+ N + + D LK++F +G S VM D GKS+ FGFV+F+ + A
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGKSKGFGFVSFEKHEDA 244
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNL 317
AVE++NG N K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+KNL
Sbjct: 245 NKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYIKNL 301
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
DD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS P+EAT+A+ EMNG+++G
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPDEATKAVTEMNGRIVGS 360
Query: 378 KPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTP 437
KPLYVA+AQRKEERKA L Q+ Q A GM L + + Q TP
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRIA--GMRALPANT-------------IINQFQPTP 405
Query: 438 G--LMP--PQAAGYGFQQQVFPGLRPGGPNYIMPYHL-QRQVHPGQRTGVRRSG-----N 487
G MP PQA P Y P + Q + +P + G R G N
Sbjct: 406 GGYFMPAVPQAQNR--------------PPYYAPNQIAQMRPNPRWQQGGRPQGFQGVPN 451
Query: 488 THQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMP--------ATPVETP 539
T + P+ +R+L AR T +V ++ P P + P A V +P
Sbjct: 452 TIRQSGPR------PALRHLTPARVPT--AVQNLSPRPSVATPAPRAVPPYKYAANVRSP 503
Query: 540 RPVPVPIST------------LT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTG 586
P P+ T LT S LA+A P ++ +MLGE+L+PL++ + A K+TG
Sbjct: 504 HPAIQPLQTPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHNNLAGKITG 563
Query: 587 MLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSD 625
MLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ +
Sbjct: 564 MLLEIDNSELLHMLESPESLRSKVEEAVAVLQAHHAKKE 602
>gi|126320658|ref|XP_001364500.1| PREDICTED: polyadenylate-binding protein 4-like [Monodelphis
domestica]
Length = 630
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 297/651 (45%), Positives = 389/651 (59%), Gaps = 86/651 (13%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 6 SSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AFG +
Sbjct: 66 ERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNI 125
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKV D NG SKGY FV FE ++AA AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 126 LSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +FTNVY+ N + + D LK++F +G S VM D GKS+ FGFV+F+ + A
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGKSKGFGFVSFEKHEDA 244
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNL 317
AVE++NG N K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+KNL
Sbjct: 245 NKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYIKNL 301
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
DD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS P+EAT+A+ EMNG+++G
Sbjct: 302 DDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPDEATKAVTEMNGRIVGS 360
Query: 378 KPLYVAVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHH 420
KPLYVA+AQRKEERKA L Q+ Q +RA PGG +P +
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPTPGGY--FMPAVPQAQN 418
Query: 421 GAPRLGPQQLYYGQGTPGLMPPQAAGY--GFQQQVFPGLRPGGPNYIM---PYHLQRQVH 475
P P Q+ + P Q G GFQ G PN I P R +
Sbjct: 419 RPPYYAPNQIAQMRPNPRW---QQGGRPQGFQ---------GVPNTIRQSGPCPALRHLT 466
Query: 476 PGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMP--- 532
P T R T PQ R G +V ++ P P + P
Sbjct: 467 PASNTQASRGLPT----TPQ---------------RVGVPTAVQNLSPRPSVATPAPRAV 507
Query: 533 -----ATPVETPRPVPVPIST-------------LTSALASASPDDRTRMLGEQLYPLVE 574
A V +P P P+ T S LA+A P ++ +MLGE+L+PL++
Sbjct: 508 PPYKYAANVRSPHPAIQPLQTPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQ 567
Query: 575 NIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSD 625
+ A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ +
Sbjct: 568 TMHNNLAGKITGMLLEIDNSELLHMLESPESLRSKVEEAVAVLQAHHAKKE 618
>gi|74212334|dbj|BAE30919.1| unnamed protein product [Mus musculus]
Length = 636
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 295/648 (45%), Positives = 393/648 (60%), Gaps = 64/648 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK++FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDEGGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYY 423
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTG 481
P Q+ + +P A + FQ PG +RP P P+ R P +
Sbjct: 424 PPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMST 479
Query: 482 VRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFE 527
R + + Q P+ +R Q +Y RN Q V+M
Sbjct: 480 QRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM------ 532
Query: 528 VSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGM
Sbjct: 533 --QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGM 584
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
LLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 585 LLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 632
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LKELF +FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 GGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|291408594|ref|XP_002720593.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oryctolagus cuniculus]
Length = 636
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 296/652 (45%), Positives = 393/652 (60%), Gaps = 64/652 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+ KSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLHKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYY 423
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTG 481
P Q+ + +P A + FQ PG +RP P P+ R P +
Sbjct: 424 PPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMST 479
Query: 482 VRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFE 527
R + + Q P+ +R Q +Y RN Q V+M
Sbjct: 480 QRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM------ 532
Query: 528 VSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGM
Sbjct: 533 --QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGM 584
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLGSLAV 635
LLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G AV
Sbjct: 585 LLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATGVPAV 636
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLHKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|53754|emb|CAA46522.1| poly(A) binding protein [Mus musculus]
Length = 636
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 294/648 (45%), Positives = 393/648 (60%), Gaps = 64/648 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F ++ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK++FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYY 423
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTG 481
P Q+ + +P A + FQ PG +RP P P+ R P +
Sbjct: 424 PPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMST 479
Query: 482 VRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFE 527
R + + Q P+ +R Q +Y RN Q V+M
Sbjct: 480 QRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM------ 532
Query: 528 VSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGM
Sbjct: 533 --QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGM 584
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
LLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 585 LLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 632
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + +
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSQ 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LKELF +FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|327283838|ref|XP_003226647.1| PREDICTED: polyadenylate-binding protein 1-like [Anolis
carolinensis]
Length = 636
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 295/648 (45%), Positives = 395/648 (60%), Gaps = 56/648 (8%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK++FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYY 423
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTG 481
QL + +P A + FQ PG +RP P P+ R P +
Sbjct: 424 PTSQLAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMST 479
Query: 482 VRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGM 531
R + + Q P+ +R Q +Y RN Q + + V +
Sbjct: 480 QRVANTSTQTMGPRPAAAAAAATPAVRTGPQ-YKYAAGVRN-PQQHLNTQPQVAMQ---Q 534
Query: 532 PATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEM 591
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGMLLE+
Sbjct: 535 PAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEI 588
Query: 592 DQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLGSLAV 635
D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G +V
Sbjct: 589 DNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNNPAGVPSV 636
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LKELF +FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|432907583|ref|XP_004077665.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 635
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 290/633 (45%), Positives = 390/633 (61%), Gaps = 54/633 (8%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+P+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGRPLRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK++FG++G S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AREFTNVYIKNFGEDMDDEKLKELFGNYGPALSVRVMTDDTGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+ +NG N + YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD ++
Sbjct: 247 AVDDMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLD 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRAPGG--MSPLASGIP-GYHHGA-PRLGPQQLYYGQ 434
A+AQRKEER+A L Q+ Q +RA ++P P GY A P+ + YY
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMATVRAVPNPVLNPYQPAPPSGYFMAAIPQAQNRAAYYSA 425
Query: 435 GTPG-LMP-PQAAGYGFQQQVFP----GLRPGGP--------------NYIMPYHLQRQV 474
L P P+ A G + Q F +RP P N +P + Q
Sbjct: 426 NQLAQLRPSPRWATQGVRPQHFQNIQNAMRPSAPRPQTFNAIRASTATNTQVPRMMASQR 485
Query: 475 HPGQRTGVRRSGNTHQMQQ----PQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSG 530
P Q R + + PQ+ +Y RN Q + S VP
Sbjct: 486 MPTQALSQRPAAASATTAPVRAMPQY--------KYAPGVRN-PQQHMASQQQVPMP--- 533
Query: 531 MPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLE 590
PA V+ P+ S LA+A P ++ +MLGE+L+PL++N+ P A K+TGMLLE
Sbjct: 534 QPAVHVQGQEPL------TASMLAAAPPQEQKQMLGERLFPLIQNMHPSLAGKITGMLLE 587
Query: 591 MDQTEVLHLIESPEALKTKVAEAMAVLQEAAAR 623
+D +E+LH++ESPE+L++KV EA+AVLQ A+
Sbjct: 588 IDNSELLHMLESPESLRSKVDEAVAVLQAHQAK 620
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 166/298 (55%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I + + + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPLRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ + N+Y+KN + ++DEKLKELF +G S +VM D
Sbjct: 177 KEREAELGARARE----------FTNVYIKNFGEDMDDEKLKELFGNYGPALSVRVMTDD 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A+++MNGK + + +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 TGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMK 284
>gi|443722844|gb|ELU11546.1| hypothetical protein CAPTEDRAFT_164502 [Capitella teleta]
Length = 629
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 296/640 (46%), Positives = 397/640 (62%), Gaps = 65/640 (10%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 9 YPMASLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAER 68
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+PIRIM+S RDPS+RKSG GN+FIKNLD +IDNKAL DTF+AFG +LS
Sbjct: 69 ALDTMNFDAIKGRPIRIMWSQRDPSLRKSGVGNIFIKNLDKNIDNKALYDTFSAFGNILS 128
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CK+A+D NG S GYGFV FE EEAA+N+I+ +NGML+N K+V+VG F+ R+ER + +
Sbjct: 129 CKIAMDQNG-SLGYGFVHFETEEAARNSIEKVNGMLLNGKKVFVGRFMSRKERLEMLGDK 187
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ KFTNVYV NL ET+ D+ L+++F FG I SA +M +G+ R FGFV+F +AAA
Sbjct: 188 AKKFTNVYVKNLNETMDDKKLREMFEVFGKIISAKMMNTEEGQKRGFGFVSFDDHEAAAK 247
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AVE+LN K YVGRAQK+AER+A+L+ KFE+ ++ R + +G NLY+KNLD+ I+
Sbjct: 248 AVEELNNKEVEGKEIYVGRAQKKAERQAELKEKFERMKMERINRYQGVNLYVKNLDEQID 307
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS+FGTITS +VM + G +KG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 308 DERLRKEFSQFGTITSARVMTE-GGRTKGFGFVCFSSPEEATKAVTEMNGRIVVAKPLYV 366
Query: 383 AVAQRKEERKARLQAQFA--------------QIRAPGG----MSPLASGIPGYHHGAPR 424
A+AQRKE+RKA L AQ+ QI PGG + +A G + +
Sbjct: 367 ALAQRKEDRKAHLAAQYMQRIAGMRMQGQGVNQIFGPGGTGYFVPTMAQTQRGGFYAPTQ 426
Query: 425 LGPQQLYYGQGTPGLMPP----QAAGYGFQQQVFPG---LRPGGPNYIMPYHLQRQVHPG 477
+ PQ + TP P Q AGY PG +R PN +QV G
Sbjct: 427 IAPQV----RSTPRWQAPNPRAQTAGYA----QLPGSGPMRNPRPN-------TQQVRAG 471
Query: 478 QR----TGVRR--SGNTHQMQQPQFMRNSNQG---IRYLDNARNGTDQSVVSMVPVPFEV 528
TG R ++ QP M+ Q +Y RN T Q V
Sbjct: 472 ANSRPITGEFRMPGAQVNRPAQPGAMQAGGQQRAPFKYTQAVRNATGQ-----------V 520
Query: 529 SGMPATPVETPRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
G A P V LT S LA+A+P ++ +MLGE+L+PL++++ P A K+TGM
Sbjct: 521 PGGAAQPQAQTAVVIQGQEPLTASMLAAAAPQEQKQMLGERLFPLIQSMYPDLAGKITGM 580
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVN 627
LLE+D +E+LH++ES E+LK KV EA+AVLQ A+ +
Sbjct: 581 LLEIDNSELLHMLESRESLKAKVEEAVAVLQAHQAKESTD 620
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 20/196 (10%)
Query: 199 QQNVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-SDGKSRCFGFVNFQ 255
QQ P + ++YV +L VT+ L + F G + S V +D +S + +VNFQ
Sbjct: 2 QQPQGPSYPMASLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQ 61
Query: 256 SPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLK 315
P A A++ +N + + +Q R+ LR K N+++K
Sbjct: 62 QPADAERALDTMNFDAIKGRPIRIMWSQ----RDPSLR------------KSGVGNIFIK 105
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI 375
NLD +I+++ L + FS FG I SCK+ +DQ+G S G GF F E A ++ ++NG ++
Sbjct: 106 NLDKNIDNKALYDTFSAFGNILSCKIAMDQNG-SLGYGFVHFETEEAARNSIEKVNGMLL 164
Query: 376 GRKPLYVAVAQRKEER 391
K ++V ++ER
Sbjct: 165 NGKKVFVGRFMSRKER 180
>gi|431901758|gb|ELK08635.1| Polyadenylate-binding protein 1 [Pteropus alecto]
Length = 636
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 295/648 (45%), Positives = 392/648 (60%), Gaps = 64/648 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYY 423
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTG 481
P Q+ + +P A + FQ PG +RP P P+ R P +
Sbjct: 424 PPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMST 479
Query: 482 VRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFE 527
R + + Q P+ +R Q +Y RN Q V+M
Sbjct: 480 QRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM------ 532
Query: 528 VSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGM
Sbjct: 533 --QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPNLAGKITGM 584
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
LLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 585 LLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 632
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|207080212|ref|NP_001128842.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|75070631|sp|Q5R8F7.1|PABP1_PONAB RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|55730462|emb|CAH91953.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 294/648 (45%), Positives = 391/648 (60%), Gaps = 64/648 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL + E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYY 423
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTG 481
P Q+ + +P A + FQ PG +RP P P+ R P +
Sbjct: 424 PPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMST 479
Query: 482 VRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFE 527
R + + Q P+ +R Q +Y RN Q V+M
Sbjct: 480 QRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM------ 532
Query: 528 VSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGM
Sbjct: 533 --QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGM 584
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
LLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 585 LLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 632
>gi|328852276|gb|EGG01423.1| hypothetical protein MELLADRAFT_39080 [Melampsora larici-populina
98AG31]
Length = 701
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 292/662 (44%), Positives = 384/662 (58%), Gaps = 57/662 (8%)
Query: 8 AATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRS 67
+A ++V++AT A P+ N SLYVG+L+ V E+ LY++FS + V S+RVCRD R
Sbjct: 37 SAPSSVSTATPNASPASQPNTSLYVGELDPTVTEAMLYEIFSMIGPVSSIRVCRDAVTRR 96
Query: 68 SLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSI 127
SLGYAYVNY N DA A E LN+ I K RIM+S RDPS+RK+G GN+FIKNLD +I
Sbjct: 97 SLGYAYVNYLNAADAERALEQLNYSLIKNKACRIMWSQRDPSLRKTGQGNIFIKNLDETI 156
Query: 128 DNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVY 187
DNKAL DTFAAFG +LSCKVA+DS G SKGYGFV + E+A+ AIK +NGM +NDK V+
Sbjct: 157 DNKALHDTFAAFGDILSCKVAMDSTGASKGYGFVHYVTAESAEAAIKGVNGMQLNDKVVF 216
Query: 188 VGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK 245
VG+ V R+ER + V FTN+Y+ NL VT E+L ++F +G +TSA V D GK
Sbjct: 217 VGIHVPRRERQAKIDEVRAHFTNLYIKNLPTEVTTEELNEMFSKYGPVTSAAVQADESGK 276
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYE 305
R FGFVN+++ ++A+ AVE L+ + YV RAQKR ER+A+LR EQ++
Sbjct: 277 HRGFGFVNYENHESASKAVEALHDKDYKGNILYVARAQKRVERDAELRRAHEQQKYETTL 336
Query: 306 KLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATR 365
K +G NLY+KNLDD +DEKL+ F FGTITSCKVM D G S+G GF FS P+EAT+
Sbjct: 337 KYQGVNLYIKNLDDEYDDEKLQAEFLPFGTITSCKVMKDDKGVSRGFGFVCFSAPDEATK 396
Query: 366 ALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRL 425
A+ EMNGKM+G KPLYV++AQRK+ RK +L+AQ +Q A+GIPG +GAP
Sbjct: 397 AVAEMNGKMLGSKPLYVSLAQRKDVRKQQLEAQMSQRAQMRSQQIAAAGIPGAPYGAP-- 454
Query: 426 GPQQLYYG----------------QGTPGLMPPQ---------------AAGYGFQQQVF 454
P Q+YYG G P MPP+ A + Q +
Sbjct: 455 -PNQMYYGGAAAYPPPGRGMAYPPNGMPAGMPPRPRYAPPGQMPPMGMPGAPHYQPPQGY 513
Query: 455 PGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNS-------------- 500
PG G P + H PG G + + +
Sbjct: 514 PGYPAGDPAFPGADHAYPAGDPGYPAGGPAPAGSMRGMPGPPGGPAPAGFRGPGGPNGPP 573
Query: 501 --NQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLT-SALASAS 557
G+ R QS P +SG AT P P + L+ +ALA AS
Sbjct: 574 IGRNGMPPAGGMRGAPPQSRDPAYHQPSTLSGR-ATSHRAPE---APQTGLSPAALAKAS 629
Query: 558 PDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVL 617
P ++ +MLGE LYP + +P A K+TGM+LE+D E+LHL+E+ AL KV+EA+ VL
Sbjct: 630 PAEQKQMLGEALYPQIAEKQPEKAGKITGMILEIDNAELLHLLENTTALDAKVSEAVQVL 689
Query: 618 QE 619
E
Sbjct: 690 DE 691
>gi|410898224|ref|XP_003962598.1| PREDICTED: polyadenylate-binding protein 4-like [Takifugu rubripes]
Length = 653
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 303/655 (46%), Positives = 400/655 (61%), Gaps = 62/655 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ LY+ FS V+S+RVCRD R SLGYAYVN+S P DA
Sbjct: 8 YPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF + GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGY FV FE ++AA AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N + + DE LK++F +G S VM D GKSR FGFV+++ + A
Sbjct: 187 AKEFTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGKSRGFGFVSYEKHEDANK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDD 319
AVE +NGT N K +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+KNLDD
Sbjct: 247 AVEDMNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQERISRYQ---GVNLYIKNLDD 303
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
+I+DEKL++ FS FG+ITS KVM+++ G SKG GF FS PEEAT+A+ EMNG+++G KP
Sbjct: 304 TIDDEKLRKEFSPFGSITSAKVMLEE-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKP 362
Query: 380 LYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGI-------PGYHHGA-PRLGPQQLY 431
LYVA+AQRKEERKA L Q+ Q R G + A+ I GY A P+ + Y
Sbjct: 363 LYVALAQRKEERKAHLTNQYMQ-RIAGMRAMPANTIINQFQPTSGYFMPAVPQAQNRTTY 421
Query: 432 YGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQM 491
Y M P + G MP L+ PG R +R+
Sbjct: 422 YAPNQLAQMRPNPRWQQQGGRG------QGGFQGMPNTLR---QPGPRGNMRQMTPNSSS 472
Query: 492 QQPQ------FMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMP----------ATP 535
Q P+ ++ N +R L S +M P P G+P AT
Sbjct: 473 QGPRGVFSNISFKSFNLTVRRLKMYILLHPGSAQTMAPRP--SMGVPGPRNVTPYKYATG 530
Query: 536 VETPRP-VPVPIST--------------LT-SALASASPDDRTRMLGEQLYPLVENIEPV 579
V P P V PI+ LT S LA+A P ++ +MLGE+L+PL++ +
Sbjct: 531 VRNPNPQVVQPIALQQAQPAVHVQGQEPLTPSMLAAAPPQEQKQMLGERLFPLIQAMHAN 590
Query: 580 HASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
A K+TGMLLE+D +E+LH++ES E+L++KV EA+AVLQ A+ D +K G++A
Sbjct: 591 LAGKITGMLLEIDNSELLHMLESHESLRSKVEEAVAVLQAHQAKKDATQKAGNMA 645
>gi|37681851|gb|AAQ97803.1| poly(A)-binding protein, cytoplasmic 1 [Danio rerio]
Length = 620
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 288/631 (45%), Positives = 386/631 (61%), Gaps = 55/631 (8%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY FS Q++S+RVCRD R SLGYAY+N+ P DA
Sbjct: 8 YPLASLYVGDLHADVTEAMLYQKFSPAGQIMSIRVCRDVITRRSLGYAYINFQQPADAEC 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +N+ I G+PIRIM+S RDP +RKSG GN+FIKN+D SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNYEVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKEREAEMGAK 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + E LK IF FG S VM D G+SR FGFVNF + A
Sbjct: 187 AVEFTNVYIKNFGEDIDSEKLKNIFTEFGKTLSVCVMTDERGRSRGFGFVNFVNHGDARR 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV ++NG N +V YVGRAQKR ER+ +L+ KFEQ + R ++ +G NLY+KNLDDSI+
Sbjct: 247 AVTEMNGKELNGRVLYVGRAQKRLERQGELKRKFEQIKQERIQRYQGVNLYVKNLDDSID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DEKL++ F+ +GTITS KVM D G S+G GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DEKLRKEFAPYGTITSAKVMTD-GGHSRGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-PGGMSPLA---------SGIP---GYHHGAPRL 425
A+AQRKEERKA L Q+ Q IRA PG P + +P +++ P L
Sbjct: 366 ALAQRKEERKAILTNQYIQRLASIRAIPGPAIPTTYQQGSGYYMTSVPQVRSFYNAVPNL 425
Query: 426 GPQQLYYGQG--TPGLMPPQAAGYGFQQQVFP--------GLRPGGPNYIMPYHLQRQVH 475
P + Q T G P Q F +Q P +R + QR +
Sbjct: 426 RPAPRWASQAPRTQGPFPAQ-----FVRQAVPRRPSTTISTVRQASTQVPHINNTQRMAN 480
Query: 476 PGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEV--SGMPA 533
G +T R+ T Q+ +Y RN Q + + PV +V + PA
Sbjct: 481 IGTQTAGGRAAGTAVRGVSQY--------KYSAGVRN-VQQVINAPAPVVHQVVQNTEPA 531
Query: 534 TPVETPRPVPVPISTLTSALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMD 592
++ P LT+++ +A+P ++ ++LGE+LYPL++ + P A K+TGMLLE+D
Sbjct: 532 VHMKGQEP-------LTASMLAAAPLKEQKQLLGERLYPLIQILHPALAGKITGMLLEID 584
Query: 593 QTEVLHLIESPEALKTKVAEAMAVLQEAAAR 623
+E+LH++ESPE+L KV EA+AVLQ A+
Sbjct: 585 NSELLHMLESPESLHAKVEEAVAVLQAHQAK 615
>gi|391332716|ref|XP_003740776.1| PREDICTED: polyadenylate-binding protein 1-like [Metaseiulus
occidentalis]
Length = 660
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 287/646 (44%), Positives = 383/646 (59%), Gaps = 51/646 (7%)
Query: 23 SGYGN---VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
SG GN SLYVGDL+ +V ES L++ F Q V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 SGGGNYTMASLYVGDLDPDVTESMLFEKFCQAGPVLSIRVCRDMISRRSLGYAYVNFHQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF P+ +P+RIM+S RDPS+RKSG GNVFIKNL IDNKA+ DTF+AF
Sbjct: 63 GDAERALDTMNFEPLKNRPMRIMWSQRDPSLRKSGVGNVFIKNLHKDIDNKAIFDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSC+VA D G S+GYGFV FE EEAA AI +NGML+N+K+V+VG FV R ER +
Sbjct: 123 GNILSCRVATDEQGNSRGYGFVHFETEEAANEAINKVNGMLLNEKKVFVGKFVPRSERER 182
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + FTNVYV N E + D LK++F +G ITSA VM D GKSR FGFV+F++P
Sbjct: 183 MMGDKARLFTNVYVKNFGEELDDGKLKEMFEVYGKITSARVMTDQTGKSRGFGFVSFENP 242
Query: 258 DAAAAAVEKLNGTT-NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
D A AV++LN N K YVGRAQK+AER +DL+ KFEQ ++ R + +G NLY+KN
Sbjct: 243 DNAEQAVKELNDKELGNGKKIYVGRAQKKAERLSDLKRKFEQLKMERMTRYQGVNLYVKN 302
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGF-SKGSGFAAFSMPEEATRALNEMNGKMI 375
LDD I+DE+L+ F+ +GTITS KVM+D G SKG GF FS PEEAT+A+ EMNG++I
Sbjct: 303 LDDVIDDERLRREFAPYGTITSAKVMMDSTGARSKGFGFVCFSSPEEATKAVTEMNGRII 362
Query: 376 GRKPLYVAVAQRKEERKARLQAQFAQ----IRAPGGMSPLASGIPGYHHGAPRLGPQQLY 431
+KPLYVA+AQRKE+R+A L +QF Q +R P G P P + P+ +
Sbjct: 363 VQKPLYVALAQRKEDRRAHLSSQFVQRFTGVRVPFGQMPFNHSTPTSFIVPASMHPRAFF 422
Query: 432 YGQGTPGLMPPQAAGYGFQQQV---FPGLRPGGPNYIMPYHLQRQVHP---GQRTGVRRS 485
+ PQ G Q +V + + QR P GQ GV +
Sbjct: 423 ASGNVANNVRPQRWAGGQQIRVSGQYAMAGGAPMATAAAANFQRAPRPTMQGQNAGVAAA 482
Query: 486 GNTHQMQQ------------------------PQFMRNSNQGIRYLDNARNGTDQSVVSM 521
N PQ NS ++ ++ RN +
Sbjct: 483 RNATMSSTRPITSTIHGAAGSGTQSRNRVGVAPQQAPNSRPTFKFTNSVRNAQPSTPAGA 542
Query: 522 VPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHA 581
P ++ A V+ P+ T LA A P D+ +MLGE+L+PL+ + A
Sbjct: 543 AP----MNASNAVLVQGQEPL------TTQMLAEACPRDQKQMLGERLFPLIYAMHADLA 592
Query: 582 SKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVN 627
K+TGMLLE+D +E+LH++E E+L+ KV EA+AVLQ A+ +++
Sbjct: 593 GKITGMLLEIDNSELLHMLEHSESLRAKVEEAVAVLQAHQAKEEIS 638
>gi|197097606|ref|NP_001126097.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|55730342|emb|CAH91893.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 294/648 (45%), Positives = 391/648 (60%), Gaps = 64/648 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SID KAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDIKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRVVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYY 423
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTG 481
P Q+ + +P A + FQ PG +RP P P+ R P +
Sbjct: 424 PPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMST 479
Query: 482 VRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFE 527
R + + Q P+ +R Q +Y RN Q V+M
Sbjct: 480 QRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM------ 532
Query: 528 VSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGM
Sbjct: 533 --QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGM 584
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
LLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 585 LLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 632
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 168/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ + L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDIKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|281350417|gb|EFB26001.1| hypothetical protein PANDA_001865 [Ailuropoda melanoleuca]
Length = 640
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 296/652 (45%), Positives = 393/652 (60%), Gaps = 68/652 (10%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+R+CRD+ R SLGYAYVNY P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKR 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYG----NVFIKNLDTSIDNKALCDTFAAFG 140
A E LNF I G+P+RIM+S RDPS+RKSG G N+FIKNLD SIDNKAL DTF+AFG
Sbjct: 68 ALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGGGVGNIFIKNLDKSIDNKALYDTFSAFG 127
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
+LSCKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 186
Query: 201 --NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
+ +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ +
Sbjct: 187 LGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 246
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
A AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLD
Sbjct: 247 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 306
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
D I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ K
Sbjct: 307 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 365
Query: 379 PLYVAVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHG 421
PLYVA+AQRKEER+A L Q+ Q +RA P G + IP +
Sbjct: 366 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNR 423
Query: 422 APRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PG 477
A P Q+ + +P A + FQ PG +RP P P+ R P
Sbjct: 424 AAYYPPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPR 479
Query: 478 QRTGVRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVP 523
+ R + + Q P+ +R Q +Y RN Q V+M
Sbjct: 480 VMSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM-- 536
Query: 524 VPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASK 583
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K
Sbjct: 537 ------QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGK 584
Query: 584 VTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 585 ITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 636
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 170/298 (57%), Gaps = 12/298 (4%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS ++ D +S GY +V ++
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A++ LN +I + V + R + V N+++ NL +++ ++ L
Sbjct: 62 PVDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGGGVGNIFIKNLDKSIDNKALYD 121
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 122 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 180
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM D+
Sbjct: 181 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 230
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 231 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 288
>gi|348529271|ref|XP_003452137.1| PREDICTED: polyadenylate-binding protein 1-like [Oreochromis
niloticus]
Length = 635
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 290/638 (45%), Positives = 387/638 (60%), Gaps = 64/638 (10%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+P+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGRPLRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK++F +G S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AREFTNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N + YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD ++
Sbjct: 247 AVDEMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLD 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPP 442
A+AQRKEER+A L Q+ Q A +P P L P Q G P
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMA------TVRAVPN-----PVLNPYQPAPPSGYFMAAIP 414
Query: 443 QA---AGYGFQQQVFPGLRPGGPNY----IMPYHLQRQVHPGQRTGVR-------RSGNT 488
QA A Y + LRP GP + + P H Q + + T R R+ T
Sbjct: 415 QAQNRAAY-YSANQLAQLRP-GPRWATQGVRPQHFQNMPNAMRPTAPRPQPLNTIRAAAT 472
Query: 489 HQMQQPQFM---RNSNQGI--------------------RYLDNARNGTDQSVVSMVPVP 525
Q P+ M R Q + +Y RN T Q + S V
Sbjct: 473 TNTQVPRMMASQRIPTQAVNQRPANASAAAAPVRAMPQYKYAAGVRN-TQQHMASQPQVT 531
Query: 526 FEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVT 585
+ PA V+ P+ S LA+A P ++ +MLGE+L+PL++N+ P A K+T
Sbjct: 532 MQ---QPAVHVQGQEPL------TASMLAAAPPQEQKQMLGERLFPLIQNMHPSLAGKIT 582
Query: 586 GMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAAR 623
GMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+
Sbjct: 583 GMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAK 620
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I + + + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPLRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ + N+Y+KN + ++DEKLKELFS++G S +VM D+
Sbjct: 177 KEREAELGARARE----------FTNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + + +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMK 284
>gi|432881580|ref|XP_004073850.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 631
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 287/625 (45%), Positives = 391/625 (62%), Gaps = 43/625 (6%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL Q+V E+ LY+ FS +VS+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPIASLYVGDLHQDVTEAMLYEKFSPAGAIVSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+P+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGQPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG S+GYGFV FE +AA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SRGYGFVHFETHDAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK+IF FG TS VM D G R FGFV+F++ + A
Sbjct: 187 AREFTNVYIKNFGEDMDDEKLKEIFSKFGNATSVRVMTDESGGGRGFGFVSFENHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N ++ +VGRAQK+ ER+ +L+ +FEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGRIMFVGRAQKKMERQMELKRRFEQMKQDRTTRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGSITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ------IRAPGGMSPLASGIP-GYHHGA-PRLGPQQLYY-- 432
A+AQRKEER+A L Q+ Q A M+P P G+ A P+ + YY
Sbjct: 366 ALAQRKEERQAHLITQYMQRVANARAAANPVMNPYQPAPPSGFIMTAIPQAQSRSAYYPT 425
Query: 433 ----GQGTPGLMPPQAAGYGFQQQVF---PG-LRP--GGPNYIMPYHLQRQVHP---GQR 479
Q PG P+ + Q F PG +RP P QV P QR
Sbjct: 426 AGQMAQLRPG---PRWTTQSVRPQHFQNMPGVMRPPRPRPQNFSTVRASSQVPPMMNTQR 482
Query: 480 TGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETP 539
+ SG H + +Y RN Q V+ P +V+ PA ++
Sbjct: 483 VAAQSSGPRHPVATAATHVRGGPQYKYSTGVRN--PQQHVATQP---QVTLQPAVHIQGQ 537
Query: 540 RPVPVPISTLTSALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLH 598
P LT+++ +A+P ++ +MLGE+L+PL++N+ P A K+TGMLLE+D +E+LH
Sbjct: 538 EP-------LTASMLAAAPLQEQKQMLGERLFPLIQNMHPSLAGKITGMLLEIDNSELLH 590
Query: 599 LIESPEALKTKVAEAMAVLQEAAAR 623
++ESPE+L++KV EA+AVLQ A+
Sbjct: 591 MLESPESLRSKVDEAVAVLQAHQAK 615
>gi|52346016|ref|NP_001005051.1| poly(A) binding protein, cytoplasmic 1 [Xenopus (Silurana)
tropicalis]
gi|49903495|gb|AAH76931.1| polyadenylate-binding protein 1 [Xenopus (Silurana) tropicalis]
Length = 634
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 287/628 (45%), Positives = 388/628 (61%), Gaps = 45/628 (7%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK++FG +G S VM D +GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+ +NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDDMNGKDMNGKAIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRAPGGM---------SPLASGIPGYHHGAPRLGPQQ 429
A+AQRKEER+A L Q+ Q +R P + S + IP + A P Q
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRVPNPVINPYQPPPSSYFMAAIPPAQNRAAYYPPGQ 425
Query: 430 LYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGP---NYIMPYHLQRQVHPGQRTGVRRS 485
+ + +P A + FQ PG +RP P + QV P + R +
Sbjct: 426 IAQLRPSPRWTAQGARPHPFQN--MPGAIRPTAPRPPTFSTMRPASNQV-PRVVSAQRVA 482
Query: 486 GNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATP 535
+ Q P+ +R Q +Y RN Q + + V + PA
Sbjct: 483 NTSTQTMGPRPTTAAAAATSAVRTVPQ-YKYAAGVRN-PQQHLNTQPQVAMQ---QPAVH 537
Query: 536 VETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTE 595
V+ P+ S LA+A P ++ +MLGE+L+PL++ + P A K+TGMLLE+D +E
Sbjct: 538 VQGQEPL------TASMLAAAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSE 591
Query: 596 VLHLIESPEALKTKVAEAMAVLQEAAAR 623
+LH++ESPE+L++KV EA+AVLQ A+
Sbjct: 592 LLHMLESPESLRSKVDEAVAVLQAHQAK 619
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A++K+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LKE+F ++G S KVM D
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDD 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+G SKG GF +F E+A +A+++MNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 NGKSKGFGFVSFERHEDAQKAVDDMNGKDMNGKAIYVGRAQKKVERQTELKRKFEQMK 284
>gi|41054151|ref|NP_956133.1| polyadenylate-binding protein 1-like [Danio rerio]
gi|27881953|gb|AAH44513.1| Zgc:55855 [Danio rerio]
gi|182890236|gb|AAI65470.1| Zgc:55855 protein [Danio rerio]
Length = 620
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 288/631 (45%), Positives = 386/631 (61%), Gaps = 55/631 (8%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY FS Q++S+RVCRD R SLGYAY+N+ P DA
Sbjct: 8 YPLASLYVGDLHADVTEAMLYQKFSPAGQIMSIRVCRDVITRRSLGYAYINFQQPADAEC 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +N+ I G+PIRIM+S RDP +RKSG GN+FIKN+D SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNYEVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKEREAEMGAK 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + E LK IF FG S VM D G+SR FGFVNF + A
Sbjct: 187 AVEFTNVYIKNFGEDIDSEKLKNIFTEFGKTLSVCVMTDERGRSRGFGFVNFVNHGDARR 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV ++NG N +V YVGRAQKR ER+ +L+ KFEQ + R ++ +G NLY+KNLDDSI+
Sbjct: 247 AVTEMNGKELNGRVLYVGRAQKRLERQGELKRKFEQIKQERIQRYQGVNLYVKNLDDSID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DEKL++ F+ +GTITS KVM D G S+G GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DEKLRKEFAPYGTITSAKVMTD-GGHSRGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-PGGMSPLA---------SGIP---GYHHGAPRL 425
A+AQRKEERKA L Q+ Q IRA PG P + +P +++ P L
Sbjct: 366 ALAQRKEERKAILTNQYIQRLASIRAIPGPAIPTTYQQGSGYYMTSVPQVRSFYNAVPNL 425
Query: 426 GPQQLYYGQG--TPGLMPPQAAGYGFQQQVFP--------GLRPGGPNYIMPYHLQRQVH 475
P + Q T G P Q F +Q P +R + QR +
Sbjct: 426 RPAPRWAFQAPRTQGPFPAQ-----FVRQAVPRRPSTTISTVRQASTQVPHINNTQRMAN 480
Query: 476 PGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEV--SGMPA 533
G +T R+ T Q+ +Y RN Q + + PV +V + PA
Sbjct: 481 IGTQTAGGRAAGTAVRGVSQY--------KYSAGVRN-VQQVINAPAPVVHQVVQNTEPA 531
Query: 534 TPVETPRPVPVPISTLTSALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMD 592
++ P LT+++ +A+P ++ ++LGE+LYPL++ + P A K+TGMLLE+D
Sbjct: 532 VHMKGQEP-------LTASMLAAAPLKEQKQLLGERLYPLIQILHPALAGKITGMLLEID 584
Query: 593 QTEVLHLIESPEALKTKVAEAMAVLQEAAAR 623
+E+LH++ESPE+L KV EA+AVLQ A+
Sbjct: 585 NSELLHMLESPESLHAKVEEAVAVLQAHQAK 615
>gi|7673359|gb|AAF66825.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 479
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 272/481 (56%), Positives = 347/481 (72%), Gaps = 18/481 (3%)
Query: 169 AQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFG 228
AQ AI LNGML+NDKQVYVG F+R+QER KF NVYV NL+E+ TD+ LKK+FG
Sbjct: 1 AQGAIDKLNGMLMNDKQVYVGHFLRKQERESTTGMTKFQNVYVKNLSESTTDDGLKKVFG 60
Query: 229 HFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAER 288
FG ITSA+VM+D+DGKS+CFGF+NF++ + AA AVE LNG +DK WYVG+AQK++ER
Sbjct: 61 EFGNITSAVVMRDADGKSKCFGFINFETAEDAAKAVESLNGKKFDDKEWYVGKAQKKSER 120
Query: 289 EADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGF 348
E +L++KFEQ +K +G NLY+KNLDD+I+DEKLKELFSEFGTITSCKVM D G
Sbjct: 121 EQELKSKFEQTAKEAVDKYQGLNLYVKNLDDTIDDEKLKELFSEFGTITSCKVMRDPSGI 180
Query: 349 SKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGM 408
S+GSGF AFS EEA+RAL+EMNGKMI KPLYVA+AQRKEER+A+L+AQF+Q+R P M
Sbjct: 181 SRGSGFVAFSTSEEASRALSEMNGKMIVSKPLYVALAQRKEERRAKLRAQFSQLR-PVAM 239
Query: 409 SP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGG---PNY 464
P LA +P Y GAP +G QQL+YGQG P ++PPQ AG+G+QQQ+ PG+RPGG PN+
Sbjct: 240 PPSLAPRMPIYPPGAPGIG-QQLFYGQGPPAMIPPQ-AGFGYQQQLVPGMRPGGAPMPNF 297
Query: 465 IMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIR----YLDNARNGTDQSVV- 519
MP +Q+ + G R +G Q QQP + R RNG + +
Sbjct: 298 FMPL-VQQGQQGQRPGGRRGAGPVQQTQQPMPLMQQQMLPRGRMYRYPPGRNGPEGPMPG 356
Query: 520 ---SMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENI 576
M+ VP+++ GM P ++ P+PISTL SALA+A P+ + MLGE LYPLV+ +
Sbjct: 357 VPGGMLSVPYDMGGM--LPRDSAMGQPMPISTLASALANAPPEQQRTMLGESLYPLVDQL 414
Query: 577 EPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLAVN 636
E HA+KVTGMLLEMDQTEVLHL+ESPEALK KVAEAM VL+ ++ ++L SL++N
Sbjct: 415 EHEHAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVQQTTNPADQLASLSLN 474
Query: 637 E 637
+
Sbjct: 475 D 475
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 130/236 (55%), Gaps = 18/236 (7%)
Query: 82 AANAKEALNFMPINGKPIRIMY----SHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFA 137
A A + LN M +N K + + + R+ + + + NV++KNL S + L F
Sbjct: 1 AQGAIDKLNGMLMNDKQVYVGHFLRKQERESTTGMTKFQNVYVKNLSESTTDDGLKKVFG 60
Query: 138 AFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
FG + S V D++G+SK +GF+ FE E A A++ LNG +DK+ YVG ++ ER
Sbjct: 61 EFGNITSAVVMRDADGKSKCFGFINFETAEDAAKAVESLNGKKFDDKEWYVGKAQKKSER 120
Query: 198 AQQNVSPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG 244
+Q + KF N+YV NL +T+ DE LK++F FGTITS VM+D G
Sbjct: 121 -EQELKSKFEQTAKEAVDKYQGLNLYVKNLDDTIDDEKLKELFSEFGTITSCKVMRDPSG 179
Query: 245 KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQER 300
SR GFV F + + A+ A+ ++NG K YV AQ++ ER A LRA+F Q R
Sbjct: 180 ISRGSGFVAFSTSEEASRALSEMNGKMIVSKPLYVALAQRKEERRAKLRAQFSQLR 235
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 97/185 (52%), Gaps = 17/185 (9%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
++YV +L ++ + L +F + + S V RD +S + ++N+ +DAA A E+
Sbjct: 40 NVYVKNLSESTTDDGLKKVFGEFGNITSAVVMRDADGKSKC-FGFINFETAEDAAKAVES 98
Query: 89 LNFMPINGKPIRI----MYSHRDPSIR------------KSGYGNVFIKNLDTSIDNKAL 132
LN + K + S R+ ++ K N+++KNLD +ID++ L
Sbjct: 99 LNGKKFDDKEWYVGKAQKKSEREQELKSKFEQTAKEAVDKYQGLNLYVKNLDDTIDDEKL 158
Query: 133 CDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFV 192
+ F+ FGT+ SCKV D +G S+G GFV F E A A+ +NG +I K +YV L
Sbjct: 159 KELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALSEMNGKMIVSKPLYVALAQ 218
Query: 193 RRQER 197
R++ER
Sbjct: 219 RKEER 223
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y ++LYV +L+ +++ +L +LFS+ + S +V RD S S G +V +S ++A+
Sbjct: 139 YQGLNLYVKNLDDTIDDEKLKELFSEFGTITSCKVMRDPSGISR-GSGFVAFSTSEEASR 197
Query: 85 AKEALNFMPINGKPIRIMYSHR 106
A +N I KP+ + + R
Sbjct: 198 ALSEMNGKMIVSKPLYVALAQR 219
>gi|52346030|ref|NP_001005062.1| embryonic polyadenylate-binding protein [Xenopus (Silurana)
tropicalis]
gi|82235830|sp|Q6DEY7.1|EPAB_XENTR RecName: Full=Embryonic polyadenylate-binding protein;
Short=Embryonic poly(A)-binding protein; Short=ePABP
gi|49899948|gb|AAH76956.1| MGC89376 protein [Xenopus (Silurana) tropicalis]
Length = 629
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 296/638 (46%), Positives = 395/638 (61%), Gaps = 53/638 (8%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A +GY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P
Sbjct: 3 ATGAGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I G+PIRIM+S RDP +RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D +G S+GYGFV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDEHG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRREREL 181
Query: 200 QNVSP--KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E + D+ L++IF FG S VM D G+SR FGFVN+ +
Sbjct: 182 EYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTGRSRGFGFVNYGNH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AV ++NG N ++ YVGRAQKR ER+ +L+ KFE QERI+RY+ G NLY+
Sbjct: 242 EEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERINRYQ---GVNLYV 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD I+D++L++ FS +GTITS KVM + G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDGIDDDRLRKEFSPYGTITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ----IRA-PGGMSPLASGIPGYHHGAPRLGPQQ 429
+ KPLYVA+AQRKEERKA L Q+ Q +RA PG + Y A P +
Sbjct: 358 VSTKPLYVALAQRKEERKAILTNQYMQRLATMRAMPGPLLGSFQQPANYFLPAMPQPPNR 417
Query: 430 LYYGQGTPGLMPP--QAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGN 487
+Y +P + P QA + Q RP P Y P L R V P R S N
Sbjct: 418 TFY---SPNPVAPVRQAPQWTSHQS-----RP--PQYQPPAPLMRAVPPR-----RMSSN 462
Query: 488 THQMQQ---------PQFMRNSNQGIRYLDNARNGTDQSVVSMVP-VPFEVSGMPATPVE 537
M+Q P R +N G + AR + S++ +P + + P+
Sbjct: 463 ISTMKQASTQVPRVAPHSQRVANIGTQ-TAGARAQVNPSIMRTMPHYKYSCAVRNVQPIG 521
Query: 538 T---------PRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
T P + LT S+LASA P ++ +MLGE+LYPL+ + P A K+TGM
Sbjct: 522 TNTHLQQVMEPAVLMQGQEPLTASSLASAPPQEQKQMLGERLYPLIHEMHPTLAGKITGM 581
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSD 625
LLE+D +E+LH++ESPE+L +KV EA+AVLQ A+ +
Sbjct: 582 LLEIDNSELLHMLESPESLHSKVEEAVAVLQAHQAKEN 619
>gi|149637721|ref|XP_001509272.1| PREDICTED: polyadenylate-binding protein 1-like [Ornithorhynchus
anatinus]
Length = 636
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 293/645 (45%), Positives = 387/645 (60%), Gaps = 58/645 (8%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK++FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQF----AQIRA-------------PGGMSPLASGIPGYHHGAP-- 423
A+AQRKEER+A L Q+ A +RA P G + IP + A
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYY 423
Query: 424 ------RLGPQQLYYGQGT---PGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQV 474
+L P + QG P P A + F +RP QR
Sbjct: 424 PASQIAQLRPSPRWTAQGARPHPFQNMPSAIRPAAPRPPFGTMRPASTQVPRVMSTQRVA 483
Query: 475 HPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFEVSG 530
+ +T R P +R Q +Y RN Q V+M
Sbjct: 484 NTSTQTMGPRPAAAAAAATPA-VRTVPQ-YKYAAGVRNPQQHLNAQPQVTM--------Q 533
Query: 531 MPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLE 590
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGMLLE
Sbjct: 534 QPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLE 587
Query: 591 MDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 588 IDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNNATG 632
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 166/299 (55%), Gaps = 25/299 (8%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ ++ +L+++++ LYD FS ++S +V D++ S GY +V++ + A
Sbjct: 96 SGVGNI--FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAA 151
Query: 83 ANAKEALNFMPINGKPIRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDTF 136
A E +N M +N + + + R+ + R + NV+IKN +D++ L + F
Sbjct: 152 ERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELF 211
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG LS KV D +G+SKG+GFV FE E AQ A+ +NG +N KQ+YVG ++ E
Sbjct: 212 GKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 197 RAQQNVSPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
R Q + KF N+YV NL + + DE L+K F FGTITSA VM +
Sbjct: 272 R-QTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG- 329
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
G+S+ FGFV F SP+ A AV ++NG K YV AQ++ ER+A L ++ Q S
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMAS 388
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LKELF +FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|147899475|ref|NP_001085069.1| polyadenylate-binding protein 1-B [Xenopus laevis]
gi|82236793|sp|Q6IP09.1|PABPB_XENLA RecName: Full=Polyadenylate-binding protein 1-B; Short=PABP-1-B;
Short=Poly(A)-binding protein 1-B; Short=xPABP1-B;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-B
gi|47940242|gb|AAH72110.1| MGC79060 protein [Xenopus laevis]
gi|80476254|gb|AAI08463.1| MGC79060 protein [Xenopus laevis]
Length = 633
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 285/641 (44%), Positives = 390/641 (60%), Gaps = 48/641 (7%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK+ FG +G S VM D GKSR FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSRGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+ +NG N K +VGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDDMNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ F+ FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFTPFGSITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRAPGGM---------SPLASGIPGYHHGAPRLGPQQ 429
A+AQRKEER+A L Q+ Q +R P + S + IP + A P Q
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRVPNPVINPYQPPPSSYFMAAIPPAQNRAAYYPPGQ 425
Query: 430 LYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGP-----NYIMPYHLQRQVHPGQRTGVRR 484
+ + +P A + FQ +RP P + + P +V QR
Sbjct: 426 IAQLRPSPRWTAQGARPHPFQNMAG-AIRPSAPRPPTFSTMRPTSQVPRVMSAQRV---- 480
Query: 485 SGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPAT 534
+ + Q P+ +R Q +Y RN T Q + + V + PA
Sbjct: 481 ANTSTQTMGPRPTTAAAAATSAVRTVPQ-YKYAAGVRN-TQQHLNTQPQVAMQ---QPAV 535
Query: 535 PVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQT 594
V+ P+ S LA+A P ++ +MLGE+L+PL++ + P A K+TGMLLE+D +
Sbjct: 536 HVQGQEPL------TASMLAAAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNS 589
Query: 595 EVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLAV 635
E+LH++ESPE+L++KV EA+AVLQ A+ + + + V
Sbjct: 590 ELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKVVSATGV 630
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 168/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A++K+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LKE F ++G S KVM D
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDD 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
HG S+G GF +F E+A +A+++MNGK + K ++V AQ+K ER+ L+ +F Q++
Sbjct: 227 HGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMK 284
>gi|327271804|ref|XP_003220677.1| PREDICTED: embryonic polyadenylate-binding protein-like [Anolis
carolinensis]
Length = 635
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 289/630 (45%), Positives = 386/630 (61%), Gaps = 54/630 (8%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
GY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 7 GYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAE 66
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A + +NF I G+PIRIM+S RDP +RKSG GN+FIKNLD SIDNKAL DTF+AFG +L
Sbjct: 67 RALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNLDDSIDNKALYDTFSAFGNIL 126
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS 203
SCKV D NG S+GYGFV FE EAA AI +NGML+ND++V+VG F R+ER + +
Sbjct: 127 SCKVVCDENG-SRGYGFVHFETHEAANRAIATMNGMLLNDRKVFVGNFKSRREREAEYGA 185
Query: 204 P--KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
+FTNVY+ N E +++E L++ F FG S VM D+ G+S+ FGFVNF+ A
Sbjct: 186 KAMEFTNVYIKNFGEEMSNERLQETFSIFGKTLSVKVMTDNIGRSKGFGFVNFEKHQDAQ 245
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLD 318
AVE +NG N ++ YVGRAQKR ER+++L+ KFE QER+SRY+ G NLY+KNLD
Sbjct: 246 KAVEDMNGKEINGRMLYVGRAQKRMERQSELKRKFEQIKQERVSRYQ---GVNLYVKNLD 302
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
D I+DE+L++ FS +GTITS KVM + G SKG GF FS PEEAT+A+ EMNG+++ K
Sbjct: 303 DGIDDERLRKEFSPYGTITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTK 361
Query: 379 PLYVAVAQRKEERKARLQAQFAQIRA-----PGGMSPLASGIPGYH-HGAPRLGPQQLYY 432
PLYVA+AQRKEERKA L Q+ Q A PG + PGY P+ P+ YY
Sbjct: 362 PLYVALAQRKEERKAILTNQYMQRLATLRTLPGPLFCSFQPPPGYFVPSIPQPQPRTPYY 421
Query: 433 GQGTPGLMPPQAAGYGFQQQ-------VFPGLRPGGP-----NYI------------MPY 468
+ P G + P LR P N I +P
Sbjct: 422 NASPVAPVRPAPRWNGQHSRPPSSYHTATPVLRTNAPPRRILNNISTMRQASTQVPRVPP 481
Query: 469 HLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEV 528
+ QR + G +T R+ + P F R +Q +Y RN Q + +M P+P +
Sbjct: 482 NAQRMANIGTQTVSVRAPSP-----PTFSRGISQ-YKYSSAVRN--IQPLNAMPPIPMQQ 533
Query: 529 SGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGML 588
PA + P+ S LA+A P ++ ++LGE+LYPL+ + P A K+TGML
Sbjct: 534 VVEPAVHIHGQEPL------TASMLAAAPPQEQKQILGERLYPLIHAMHPFLAGKITGML 587
Query: 589 LEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
LE+D +E+L ++ESPE+L +K+ EA+AVLQ
Sbjct: 588 LEIDNSELLLMLESPESLHSKIEEAVAVLQ 617
>gi|444706907|gb|ELW48224.1| Polyadenylate-binding protein 4 [Tupaia chinensis]
Length = 692
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 298/644 (46%), Positives = 388/644 (60%), Gaps = 73/644 (11%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPTGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPL-----------ASGIPGYHHGA- 422
+G KPLYVA+AQRKEERKA L Q+ Q A GM L A+G GY A
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQRVA--GMRALPANAILNQFQPAAG--GYFVPAV 413
Query: 423 PRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQR--- 479
P+ GP L PP GF Q + +R GP + + P R
Sbjct: 414 PQPGPWSASLVSDEQCLSPP-----GF-QGMPSAIRQSGPRPTLRHLAPTGNAPASRGLP 467
Query: 480 TGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMP------- 532
T +R G+ + P + G A+ G S S VP V +
Sbjct: 468 TTTQRVGS----ECPDRLAMDFGGA---GAAQQGLTDSCQSGGGVPTAVQNLAPRAAVAA 520
Query: 533 -----------ATPVETPRPVPVPIST-------------LTSALASASPDDRTRMLGEQ 568
A+ V +P P P+ S LA+A P ++ +MLGE+
Sbjct: 521 PAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGER 580
Query: 569 LYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAE 612
L+PL++ + A K+TGMLLE+D +E+LH++ESPE+L++KV+E
Sbjct: 581 LFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVSE 624
>gi|94730404|sp|P20965.3|PABPA_XENLA RecName: Full=Polyadenylate-binding protein 1-A; Short=PABP-1-A;
Short=Poly(A)-binding protein 1-A; Short=xPABP1-A;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-A
gi|30353795|gb|AAH52100.1| Pabpc1 protein [Xenopus laevis]
Length = 633
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 287/646 (44%), Positives = 395/646 (61%), Gaps = 58/646 (8%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL Q+V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+P+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N + + DE LK++FG +G S VM D +GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K +VGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ F FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFLPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRAPGGM---------SPLASGIPGYHHGAPRLGPQQ 429
A+AQRKEER+A L Q+ Q +R P + S + IP + A P Q
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRVPNPVINPYQPPPSSYFMAAIPPAQNRAAYYPPGQ 425
Query: 430 LYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGP-----NYIMPYHLQ-RQVHPGQR--- 479
+ + +P A + FQ PG +RP P + + P Q +V QR
Sbjct: 426 IAQLRPSPRWTAQGARPHPFQN--MPGAIRPTAPRPPTFSTMRPASNQVPRVMSAQRVAN 483
Query: 480 TGVRRSGNTHQMQQ----------PQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVS 529
T + G PQ+ + G+R N ++ Q V+M
Sbjct: 484 TSTQTMGPRPTTAAAAAASAVRAVPQYKYAA--GVR---NQQHLNTQPQVAM-------- 530
Query: 530 GMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
PA V+ P+ S LA+A P ++ +MLGE+L+PL++ + P A K+TGMLL
Sbjct: 531 QQPAVHVQGQEPL------TASMLAAAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLL 584
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLAV 635
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + + + V
Sbjct: 585 EIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKVVNATGV 630
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I + V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A++K+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN D +NDE+LKE+F ++G S KVM D
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDD 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+G SKG GF +F E+A +A++EMNGK + K ++V AQ+K ER+ L+ +F Q++
Sbjct: 227 NGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMK 284
>gi|410910966|ref|XP_003968961.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 635
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 287/639 (44%), Positives = 393/639 (61%), Gaps = 39/639 (6%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+ Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 6 ASYPMASLYVGDLHTDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF I G+P+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +
Sbjct: 66 ERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNI 125
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 126 LSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +FTNVY+ N + + +E L+ +F +G S VM D GKSR FGFV+F+ + A
Sbjct: 185 ARAREFTNVYIKNFGDDMDEEKLRDVFNKYGNAMSIRVMTDDSGKSRGFGFVSFERHEDA 244
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
AV+++NG N K YVGRAQK+ ER+A+L+ KFEQ + R + +G NLY+KNLDD
Sbjct: 245 QKAVDEMNGKEMNGKPIYVGRAQKKVERQAELKRKFEQMKQDRMTRYQGVNLYVKNLDDG 304
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPL
Sbjct: 305 IDDERLRKEFSPFGTITSAKVMLE-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
Query: 381 YVAVAQRKEERKARLQAQFAQ----IRAPGG--MSPLASGIP-GYHHGA-PRLGPQQLYY 432
YVA+AQRKEER+A L Q+ Q +RA ++P P GY A P+ + YY
Sbjct: 364 YVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMTAIPQAQNRGAYY 423
Query: 433 ---GQGTPGLMPPQAAGYGFQQQVF----PGLRPGGPNYIM-----PYHLQRQVHPGQRT 480
GQ P+ G + Q F +R GP M P ++ QR
Sbjct: 424 PAAGQMAQLRPSPRWPTQGVRPQHFQNMQSAMRSSGPRPQMFGSMRPSSQLPRMTANQRV 483
Query: 481 GVRRSGNTHQMQQPQFMRNSNQGI---RYLDNARNGTDQSVVSMVPVPFEVSGMPATPVE 537
+ G NS +G+ +Y RN T Q V+ P V+
Sbjct: 484 ATQAMGPRTATTATSITANSVRGVSQYKYATGVRN-TQQ----------HVNAQPQVTVQ 532
Query: 538 TPRPVPVPISTLTSALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEV 596
P V LT+ + +A+P ++ +MLGE+L+PL++ + A K+TGMLLE+D +E+
Sbjct: 533 QPAVVVQGQEPLTTTMLAAAPLHEQKQMLGERLFPLIQAMHLSLAGKITGMLLEIDNSEL 592
Query: 597 LHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLAV 635
LH++ESPE+L++KV EA+AVLQ A+ + + + AV
Sbjct: 593 LHMLESPESLRSKVDEAVAVLQAHQAKEAAQKSVTNSAV 631
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 171/298 (57%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L T + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAASYPMASLYVGDLHTDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I + V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ + N+Y+KN D +++EKL+++F+++G S +VM D
Sbjct: 177 KEREAELGARARE----------FTNVYIKNFGDDMDEEKLRDVFNKYGNAMSIRVMTDD 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G S+G GF +F E+A +A++EMNGK + KP+YV AQ+K ER+A L+ +F Q++
Sbjct: 227 SGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKPIYVGRAQKKVERQAELKRKFEQMK 284
>gi|64970|emb|CAA40721.1| polyA binding protein [Xenopus laevis]
Length = 633
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 286/634 (45%), Positives = 390/634 (61%), Gaps = 58/634 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL Q+V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+P+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N + + DE LK++FG +G S VM D +GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K +VGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ F FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFLPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRAPGGM---------SPLASGIPGYHHGAPRLGPQQ 429
A+AQRKEER+A L Q+ Q +R P + S + IP + A P Q
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRVPNPVINPYQPPPSSYFMAAIPPAQNRAAYYPPGQ 425
Query: 430 LYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGP-----NYIMPYHLQ-RQVHPGQR--- 479
+ +P A + FQ PG +RP P + + P Q +V QR
Sbjct: 426 IAQLSPSPRWTAQGARPHPFQN--MPGAIRPTAPRPPTFSTMRPASNQVPRVMSAQRVAN 483
Query: 480 TGVRRSGNTHQMQQ----------PQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVS 529
T + G PQ+ + G+R N ++ Q V+M
Sbjct: 484 TSTQTMGPRPTTAAAAAASAVRAVPQYKYAA--GVR---NQQHLNTQPQVAM-------- 530
Query: 530 GMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
PA V+ P+ S LA+A P ++ +MLGE+L+PL++ + P A K+TGMLL
Sbjct: 531 QQPAVHVQGQEPL------TASMLAAAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLL 584
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAAR 623
E+D +E+LH++ESPE+L++KV EA+AVLQ A+
Sbjct: 585 EIDNSELLHMLESPESLRSKVDEAVAVLQAHQAK 618
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I + V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A++K+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN D +NDE+LKE+F ++G S KVM D
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDD 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+G SKG GF +F E+A +A++EMNGK + K ++V AQ+K ER+ L+ +F Q++
Sbjct: 227 NGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMK 284
>gi|193592023|ref|XP_001950415.1| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 630
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 298/632 (47%), Positives = 388/632 (61%), Gaps = 58/632 (9%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V E+ L++ FS V VVSVRVCRD R SLGYAYVN+ N DA A +
Sbjct: 3 SLYVGDLHSDVTEAMLFEKFSAVGVVVSVRVCRDNITRRSLGYAYVNFQNMADAECALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF +NG P+RIM+S RDPS+RKSG GNVFIKNLD +IDNKA+ DTF+AFG +LSCKVA
Sbjct: 63 MNFEILNGCPMRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D GQSKGYGFV F+ E++A +I+ +NGML+N K+V+VG FV R++R ++ + F
Sbjct: 123 QDETGQSKGYGFVHFDMEQSATQSIEKVNGMLLNGKKVFVGRFVGRKDREKELGQKAKLF 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVY+ N+ E V D++L ++F +G+ITS VM DG SR FGFV F+ P A AV +
Sbjct: 183 TNVYIKNIDENVNDKELFEMFEKYGSITSCKVMFKDDGSSRGFGFVAFEDPKEAEKAVSE 242
Query: 267 LNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
L+G + + K +YVGRAQK+AER+ +L+ KFEQ +I R + +G NLY+KNLDD+I+DE
Sbjct: 243 LHGKESPEGKTYYVGRAQKKAERQNELKRKFEQYKIERMNRYQGINLYVKNLDDTIDDEH 302
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L+ FS FGTITS KVM+D G SKG GF FS PEEAT+A+ EMN +++G KPLYVA+A
Sbjct: 303 LRREFSVFGTITSAKVMMDD-GRSKGFGFVCFSSPEEATKAVTEMNNRIVGTKPLYVALA 361
Query: 386 QRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGA------PRLGPQQLYYGQGTPGL 439
QRKEERKA L AQ+ Q M + P Y GA P + Q +YG
Sbjct: 362 QRKEERKAHLNAQYLQSNTNMRMQSIG---PIYQPGASSGYFVPTIPQGQRFYGPAQMTQ 418
Query: 440 MPPQAAGYGFQQQVFPGL----RPGGPNYIMPYH---LQRQVHPGQRTGV---------R 483
+ PQ + Q QV G PN Y + V GQ+
Sbjct: 419 IRPQPR-WASQPQVRIATPQNAAAGHPNMATQYRNIGARAPVPAGQQAAFTGNSMVNRNS 477
Query: 484 RSGNTHQMQQPQFM----------RNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGM-P 532
R +T Q Q P + R+S G +Y N RN P E GM
Sbjct: 478 RPISTAQQQIPGAVSAGSVRVPSARSSGSGYKYTANMRN-----------PPGEAQGMGQ 526
Query: 533 ATPVETPRPVPVPIST------LTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTG 586
A P + P PV + S LASA P+D+ +MLGE+L+PL++ I P K+TG
Sbjct: 527 AQPRQPPAPVQAALHVHGQEPLTASMLASAKPEDQKQMLGERLFPLIQRIYPKFTGKITG 586
Query: 587 MLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
MLLE+D +EVLH++E E+LK KV EA+AV+Q
Sbjct: 587 MLLEIDNSEVLHMLEHQESLKIKVQEAVAVIQ 618
>gi|321466794|gb|EFX77787.1| polyadenylate binding protein, cytoplasmic 1 [Daphnia pulex]
Length = 574
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 273/604 (45%), Positives = 368/604 (60%), Gaps = 64/604 (10%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+ Y SLYVGDL V E+ L++ FS VVS+RVCRD R SLGYAYVN+ P DA
Sbjct: 7 ANYPIASLYVGDLHNEVTEAMLFEKFSTAGPVVSIRVCRDMITRRSLGYAYVNFQQPADA 66
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A +++NF + G+PIRIM+S RDPS+R+SG GN+FIKNLD +IDNKA+ DTF+AFG +
Sbjct: 67 ERALDSMNFDVLRGRPIRIMWSQRDPSLRRSGVGNIFIKNLDKTIDNKAMYDTFSAFGNI 126
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKVA D G SKGYGFV FE EE+A NAI +NGML+N K+V+VG F+ R++R ++
Sbjct: 127 LSCKVAQDEAGNSKGYGFVHFETEESAVNAITKVNGMLLNGKKVFVGRFIPRKDRERELG 186
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ FTNVY+ N + DE L + F +G +TS VM DGKSR FGFV ++ PDAA
Sbjct: 187 EKAKYFTNVYIKNFGDEFDDEKLFECFSKYGKVTSHKVMSSDDGKSRGFGFVCYEDPDAA 246
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
A + ++ N K +VGRAQKR ER+ +LR KFEQ +I R + +G NLY+KNLDD+
Sbjct: 247 ERACDDMHAKDMNGKTLFVGRAQKRNERQTELRRKFEQMKIERLNRYQGVNLYVKNLDDT 306
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
I+DE+L++ F+ +GTITS KVM + G GF FS PEEAT+A+ EMNG+++ KPL
Sbjct: 307 IDDERLRKEFAPYGTITSAKVMTEGGRNKGGFGFVCFSSPEEATKAVTEMNGRILVSKPL 366
Query: 381 YVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLM 440
YVA+AQRKE+RKA+L +Q+ Q
Sbjct: 367 YVALAQRKEDRKAQLASQYMQ--------------------------------------- 387
Query: 441 PPQAAGYGFQQ--QVFPGLRPGGPNYIMPYHLQ--RQVHPGQRTGVRRSGNTHQMQQPQF 496
+ AG QQ Q+F +PGGP Y MP +Q R P Q R + QP+
Sbjct: 388 --RMAGMRMQQMGQMF---QPGGPGYFMPAPIQPQRFYTPAQMAQFRATPRWSAQPQPR- 441
Query: 497 MRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSG--MPATPVETPRPVPVPISTLTSALA 554
G ++ RN Q + + +G A V+ P+ S LA
Sbjct: 442 -----PGFKFTPAMRNPPSQGSLPSNAMGGSAAGGMQQALVVQGQEPL------TASMLA 490
Query: 555 SASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAM 614
SA+P+D+ +MLGE+L+PL++ + P A K+TGMLLE+D +E+LH++E E+LK KV EA+
Sbjct: 491 SAAPNDQKQMLGERLFPLIQRMYPDMAGKITGMLLEIDNSELLHMLEHNESLKAKVDEAV 550
Query: 615 AVLQ 618
AVLQ
Sbjct: 551 AVLQ 554
>gi|255080002|ref|XP_002503581.1| predicted protein [Micromonas sp. RCC299]
gi|226518848|gb|ACO64839.1| predicted protein [Micromonas sp. RCC299]
Length = 597
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/430 (59%), Positives = 308/430 (71%), Gaps = 10/430 (2%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
G SLY GDL+ N E+QLY+LFS + VVS+RVCRD R SLGYAYVN+ DAA
Sbjct: 16 GLSATSLYCGDLDSNCTEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFQQGADAA 75
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A + LNF +NGKPIRIMYS RDP++RKSG GN+FIKNLD IDNKAL DTF+ FG ++
Sbjct: 76 RAIDVLNFNVVNGKPIRIMYSQRDPALRKSGVGNIFIKNLDKEIDNKALYDTFSQFGNIV 135
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS 203
S KVA D G SKGYGFVQF +EAAQ AI +NGML+NDKQVYVG F RR ER +
Sbjct: 136 SAKVAADGQGVSKGYGFVQFAEQEAAQQAIDKVNGMLLNDKQVYVGPFQRRGERGGGPTT 195
Query: 204 PKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAA 263
F NVYV NL E+V ++ LK++FG G +TS ++MKD +GKS+ FGFV F+ +AA+ A
Sbjct: 196 --FNNVYVKNLHESVDEDKLKEVFGAVGKLTSVVIMKDGEGKSKGFGFVCFEESEAASEA 253
Query: 264 VEKLNGTTN-NDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
VEKL+G DK W V RAQK+AEREA+L+AKF+ ER R EK+ GANLY+KNL+D+++
Sbjct: 254 VEKLDGYDKIEDKAWVVCRAQKKAEREAELKAKFDAERRERLEKMAGANLYIKNLEDTVD 313
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
D KL+ELF+EFGTITSC+VM D G S+GS F AFS +EATRA+ EMNGKM G KPLYV
Sbjct: 314 DAKLRELFAEFGTITSCRVMRDASGASRGSAFVAFSSADEATRAVTEMNGKMAGTKPLYV 373
Query: 383 AVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLM-P 441
A+AQRKE+R+ RLQAQFAQ RA G P +YYGQ PG+M P
Sbjct: 374 ALAQRKEDRRMRLQAQFAQ-RAVANGGMPGMPYGMPPPGV----PGAMYYGQPPPGVMGP 428
Query: 442 PQ-AAGYGFQ 450
PQ G+GFQ
Sbjct: 429 PQPQPGFGFQ 438
>gi|432865704|ref|XP_004070572.1| PREDICTED: embryonic polyadenylate-binding protein-like [Oryzias
latipes]
Length = 624
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 288/636 (45%), Positives = 384/636 (60%), Gaps = 60/636 (9%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
GY SLYVGDL +V E+ LY FS +VS+RVCRD R SLGYAY+N+ P DA
Sbjct: 7 GYPLASLYVGDLHPDVTEAMLYQKFSPAGPIVSIRVCRDIITRRSLGYAYINFQQPADAE 66
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A + +N+ I G+PIRIM+S RDP++RKSG GN+FIKN+D SIDNKAL DTF+AFG +L
Sbjct: 67 CALDTMNYDVIKGRPIRIMWSQRDPALRKSGVGNIFIKNIDDSIDNKALYDTFSAFGNIL 126
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS 203
SCKV D G SKGYGFV FE +EAA AI+ +NGML+ND++V+VG F R+ER + +
Sbjct: 127 SCKVVCDERG-SKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKEREVEFGT 185
Query: 204 P--KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
KFTN+Y+ N + +TDE LK+ F FG S VM+D G+SR FGFVN+ + A
Sbjct: 186 KVMKFTNIYIKNFGDNLTDEKLKEAFSAFGKTLSVRVMRDEKGRSRGFGFVNYAHHEDAQ 245
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV+++NG N K+ YVGRAQKR ER+ +L+ KF+Q + R ++ +G NLY+KNLDDSI
Sbjct: 246 KAVDEMNGKEMNGKIIYVGRAQKRLERQGELKRKFDQLKQDRIQRYQGVNLYVKNLDDSI 305
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DE+L++ FS +GTITS KVM + G SKG GF FS PEEAT+A+ EMNG+++ KPLY
Sbjct: 306 DDERLRKEFSPYGTITSAKVMTEA-GQSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLY 364
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMP 441
VA+AQR+EERKA L ++ Q A P + I YH Q YY +
Sbjct: 365 VALAQRREERKAILTNKYMQRMATLRTMP-SPIIDSYH--------QSGYY------MTV 409
Query: 442 PQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGV-----RRSGNT------HQ 490
PQ + + +RP P + P QR P V RR T
Sbjct: 410 PQVRSF-YNHNAVSNVRP-IPRW--PGQPQRPQDPYSSHIVGGSFARRGSTTITTVKQAS 465
Query: 491 MQQPQFM----RNSNQGI------------------RYLDNARNGTDQSVVSMVPVPFEV 528
Q P+ + + +N G +Y RN V VP P
Sbjct: 466 TQAPRIIASTQKTNNIGTQTVGGRADVAGVLRSGQYKYSSAVRNPLH---VVTVPAPMTR 522
Query: 529 SG-MPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
S +P + VE P + P S LA+A P D+ ++LG++LYPL+ +P A K+TGM
Sbjct: 523 SQVVPVSMVEPPVHILGPEPLTASMLAAAPPMDQKQLLGDRLYPLILAQQPNLAGKITGM 582
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAAR 623
LLE+D +E+LH++ESPE+LK+KV EA+AVLQ A+
Sbjct: 583 LLEIDNSELLHMLESPESLKSKVDEAIAVLQAHQAK 618
>gi|260815191|ref|XP_002602357.1| hypothetical protein BRAFLDRAFT_234358 [Branchiostoma floridae]
gi|229287666|gb|EEN58369.1| hypothetical protein BRAFLDRAFT_234358 [Branchiostoma floridae]
Length = 620
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 291/643 (45%), Positives = 385/643 (59%), Gaps = 70/643 (10%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL+ ++ E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 9 YPCASLYVGDLDPDITEAMLYEKFSPAGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAER 68
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GNVFIKNLD SIDNKA+ DTF+AFG +LS
Sbjct: 69 ALDTMNFDTIKGKPMRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAIYDTFSAFGNILS 128
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER--AQQNV 202
CKVA D G SKG+GFV FE +EAA A+ +NGM++N K+VYVG FV R ER A
Sbjct: 129 CKVAQDETGSSKGFGFVHFETQEAADEAMAKVNGMMLNGKKVYVGRFVPRSERLAAMGEA 188
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+FTN+YV N + D+ L+ F +G + SA VM D G SR FGFV+++ PD+A
Sbjct: 189 QKRFTNIYVKNFGDKWDDDKLRDFFEKYGKVVSAKVMTDDMGHSRGFGFVSYEEPDSAGK 248
Query: 263 AVEKLNGTTNND-KVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLD 318
A E++N +D + YVGRAQK+AER+A+L+AKFE QERI RY+ G NLY+KNLD
Sbjct: 249 ACEEMNDMEVDDGRRIYVGRAQKKAERQAELKAKFEKIKQERIQRYQ---GVNLYVKNLD 305
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
+I++E L++ FS+FGTITS KVM + +G SKG GF FS PEEAT+A+ EMNG+++ K
Sbjct: 306 STIDEEILRKEFSQFGTITSSKVMTE-NGRSKGFGFVCFSSPEEATKAVTEMNGRIVVSK 364
Query: 379 PLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGA--------PRLGPQQL 430
PLYVA+AQRKE+RKA+L +Q+ Q A GM A G+ PR P Q+
Sbjct: 365 PLYVALAQRKEDRKAQLASQYMQRMA--GMRMPAPQPNQMFQGSSYFMPSMQPRYFPSQM 422
Query: 431 YYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYH---------------LQRQVH 475
+ +P G Q F + G + + R
Sbjct: 423 AQVRASPRWQQAAPMRPGGQATAFQAMPAAGSRFPAATAPRAAAAAVRQVAPQAMARTTQ 482
Query: 476 -PGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARN----GTDQSVVSMVPVPFEVSG 530
P QR R + +Q +P G +Y RN G Q +M P V G
Sbjct: 483 PPAQRMAGRVAAMANQQPRP--------GYKYTATMRNPPSGGQPQ---AMNPSAVHVQG 531
Query: 531 MPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLE 590
P++ ++ LA+A P ++ +MLGE+L+PL++N P A K+TGMLLE
Sbjct: 532 QE------------PLT--STMLAAAPPQEQKQMLGERLFPLIQNSHPDLAGKITGMLLE 577
Query: 591 MDQTEVLHLIESPEALKTKVAEAMAVLQ-----EAAARSDVNE 628
+D E+LH++ES E+LK KV EA+AVLQ E AAR+ V E
Sbjct: 578 IDNAELLHMLESRESLKAKVEEAVAVLQAHQAKEQAARAGVAE 620
>gi|119612225|gb|EAW91819.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_e [Homo
sapiens]
Length = 633
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 293/648 (45%), Positives = 390/648 (60%), Gaps = 67/648 (10%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK +FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKDLFG---PALSVKVMTDESGKSKGFGFVSFERHEDAQK 243
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 244 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 303
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 304 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 362
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 363 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYY 420
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTG 481
P Q+ + +P A + FQ PG +RP P P+ R P +
Sbjct: 421 PPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMST 476
Query: 482 VRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFE 527
R + + Q P+ +R Q +Y RN Q V+M
Sbjct: 477 QRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM------ 529
Query: 528 VSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGM
Sbjct: 530 --QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGM 581
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
LLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 582 LLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 629
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LK+L FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKDL---FGPALSVKVMTDE 223
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 224 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 281
>gi|395829049|ref|XP_003787673.1| PREDICTED: polyadenylate-binding protein 1-like [Otolemur
garnettii]
Length = 611
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 281/616 (45%), Positives = 383/616 (62%), Gaps = 29/616 (4%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A SGY SLYVGDL +V E+ LY+ FS V ++S+RVCRD + R SLGYAY+N+ P
Sbjct: 3 ASSSGYPLASLYVGDLHADVTEALLYEKFSPVGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ F
Sbjct: 63 ADAERALDTMNFEMIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEASIDNKALYDTFSTF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKVA D +G S+G+GFV FE EAAQ+AI +NGML+ND +V+VG F R+ER
Sbjct: 123 GNILSCKVACDEHG-SRGFGFVHFETHEAAQHAINTMNGMLLNDHKVFVGHFKSRREREV 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTN+YV NL V ++ L+++F FG + S VM+DS G SR FGFVNF++
Sbjct: 182 ELGARAMEFTNIYVKNLQADVDEQGLQELFSQFGKMLSVKVMRDSSGHSRGFGFVNFETH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
+ A AV +NG + ++ YVGRAQKR ER+ +L+ +FEQ + R + +G NLY+KNL
Sbjct: 242 EEAQKAVVHMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRMNRYQGVNLYVKNL 301
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
DDSI+DEKL++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG+++G
Sbjct: 302 DDSIDDEKLRKEFSPYGMITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 378 KPLYVAVAQRKEERKARLQAQFAQ----IRAPGG------MSPLASGIPGYHHGAPRLGP 427
KPLYVA+AQRKEERKA L Q+ Q +RA G P + +P P+
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQRLSTMRALGSPFLGSFQQPTSYFLP----AVPQPPG 416
Query: 428 QQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGN 487
Q YYG + + PPQ A Q R + + P + R+ P R +
Sbjct: 417 QAAYYGSSS--MPPPQPAPRWTSQPP----RSSSASMVRPPGMSRR--PSAHISSMRQAS 468
Query: 488 THQMQQ-PQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPI 546
T + P R +N G + +GT + +P++ + E VP
Sbjct: 469 TQVPRPLPHTQRVANIGTQ--TTGSSGTGCCMPGRPLLPYKSTHNTHRVQEPAVHVPGQE 526
Query: 547 STLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEAL 606
S LA+A ++ +M+GE+LYPL+ ++ A K+TGMLLE+D +E+L ++ESPE+L
Sbjct: 527 PLTVSMLAAAPLHEQKQMIGERLYPLIREVQSQLAGKITGMLLEIDNSELLLMLESPESL 586
Query: 607 KTKVAEAMAVLQEAAA 622
KV EA+AVLQE A
Sbjct: 587 HAKVEEAVAVLQEHQA 602
>gi|35570|emb|CAA68428.1| unnamed protein product [Homo sapiens]
Length = 633
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 293/648 (45%), Positives = 390/648 (60%), Gaps = 67/648 (10%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK + FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKDL---FGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 243
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 244 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 303
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 304 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 362
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 363 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYY 420
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTG 481
P Q+ + +P A + FQ PG +RP P P+ R P +
Sbjct: 421 PPSQVAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMST 476
Query: 482 VRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFE 527
R + + Q P+ +R Q +Y RN Q V+M
Sbjct: 477 QRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM------ 529
Query: 528 VSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGM
Sbjct: 530 --QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGM 581
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
LLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 582 LLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 629
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LK+L FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKDL---FGPALSVKVMTDE 223
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 224 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 281
>gi|2665654|gb|AAB88449.1| polyadenylate binding protein [Petromyzon marinus]
Length = 630
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 295/630 (46%), Positives = 389/630 (61%), Gaps = 51/630 (8%)
Query: 22 PSG--YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
P+G Y SLY+GDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P
Sbjct: 3 PAGPSYPMASLYIGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF + GKPIRIM+S RDPS+R+SG GN+FIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVVKGKPIRIMWSQRDPSLRRSGVGNIFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGYGFV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYGFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHF-GTITSAIVMKDSDGKSRCFGFVNFQS 256
+ + +FTNVY+ N + + DE L++ F + G S VM D GKS+ FGFV+F+
Sbjct: 182 EFGAKAREFTNVYIKNFGDDMDDERLREYFEQYVGKTLSVKVMMDEGGKSKGFGFVSFER 241
Query: 257 PDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLY 313
+ A AV+++N N + YVGRAQK+AER+ +L+ KFE QER+S+Y+ G NLY
Sbjct: 242 HEDAQKAVDEMNTKELNGRAIYVGRAQKKAERQTELKRKFEMLKQERMSKYQ---GVNLY 298
Query: 314 LKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGK 373
+KNLDD+INDE+L + FS FGTITS KVM+++ G S+G GF FS PEEAT+A+ EMNG+
Sbjct: 299 VKNLDDNINDERLWKEFSPFGTITSAKVMMEE-GRSRGFGFVCFSSPEEATKAVTEMNGR 357
Query: 374 MIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLG------P 427
+IG KPLYVA+AQRKEERK L +QF Q R G + S I G + A G P
Sbjct: 358 IIGSKPLYVALAQRKEERKMHLTSQFMQ-RLAGMRAVPPSAIIGQYQPAAASGYFMAAMP 416
Query: 428 QQ-----LYYGQGTPGLMPPQAAGYGFQQQVFP-GLRPGGPNYIM-------PYHLQ-RQ 473
QQ YY TP M P + QV P G G I P Q R
Sbjct: 417 QQAQGRTAYY---TPSPMAPMRPNPRWPLQVRPQGAHAAGFQAITGPMRQPAPRPTQMRT 473
Query: 474 VHPGQRTGVRRSGNTHQMQQPQFMRNSN-----QGIRYLDNARNGTDQSVVSMVPVPFEV 528
V+P V R+ + M +P F + G +Y + RN V P +
Sbjct: 474 VNPASVPQVPRA-SQGMMPRPTFPTQAAGPRALPGYKYTGSVRNPQQPGVQG----PGAM 528
Query: 529 SGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGML 588
P + V P+ S LA+A P ++ +MLGE+L+PL+ + P A K+TGML
Sbjct: 529 QQAPQSAVHIQGQEPL----TASMLAAAPPHEQKQMLGERLFPLIHGMYPTLAGKITGML 584
Query: 589 LEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
LE+D +E+LH++ESPE+L+ KV EA+AVLQ
Sbjct: 585 LEIDNSELLHMLESPESLRAKVEEAVAVLQ 614
>gi|308806325|ref|XP_003080474.1| polyadenylate-binding protein, putative / PABP, putative (ISS)
[Ostreococcus tauri]
gi|116058934|emb|CAL54641.1| polyadenylate-binding protein, putative / PABP, putative (ISS)
[Ostreococcus tauri]
Length = 504
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/395 (61%), Positives = 299/395 (75%), Gaps = 6/395 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDLE +V E+QLY+ FS + VVS+RVCRD R SLGYAYVN+ + DAA+A +
Sbjct: 33 SLYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDLITRRSLGYAYVNFQSSSDAAHAIDV 92
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF INGKPIR++YS RDP++R+SG GN+FIKNLD +IDNKAL DTFA FGT+ S KVA
Sbjct: 93 LNFQVINGKPIRVLYSQRDPAVRRSGVGNIFIKNLDKAIDNKALLDTFAQFGTITSAKVA 152
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
+DS G SKGYGFVQFE EAAQ AI +NGM +NDKQVYVG F RR +R+ Q KF N
Sbjct: 153 MDSAGNSKGYGFVQFETAEAAQAAIDNVNGMELNDKQVYVGPFQRRADRSTQG-EAKFNN 211
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
VYV NL+E ++DE L++ F G +TS ++MKD +GKS+ FGFV F+SP+ AA+AVE L+
Sbjct: 212 VYVKNLSENLSDEKLREKFAEHGAVTSCVIMKDEEGKSKGFGFVCFESPEGAASAVENLD 271
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G T ++K W V RAQK+AEREA+L+AKFE ER R EK+ GANLY+KNL++ +DEKL+E
Sbjct: 272 GYTEDEKTWVVCRAQKKAEREAELKAKFEAERRERMEKMAGANLYIKNLEEGTDDEKLRE 331
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRK 388
LF+EFGTITSC+VM D G S+GS F AFS P+EATRA+ EMNGKM+G KPLYVA+AQRK
Sbjct: 332 LFNEFGTITSCRVMRDASGASRGSAFVAFSSPDEATRAVTEMNGKMVGAKPLYVALAQRK 391
Query: 389 EERKA-RLQAQFAQIRAPGGMSPLASGI----PGY 418
EE A R A + + A G S A + PGY
Sbjct: 392 EEPHAGRWHAGYGPVHATAGCSGRADVLRPTAPGY 426
>gi|403169797|ref|XP_003889581.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375168424|gb|EHS63645.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 715
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 289/661 (43%), Positives = 382/661 (57%), Gaps = 74/661 (11%)
Query: 11 AAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLG 70
+++ + T A P+ N SLYVG+L+ V E+ LY++FS + V S+RVCRD R SLG
Sbjct: 67 SSIATTTPNASPASQPNTSLYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLG 126
Query: 71 YAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNK 130
YAYVNY N DA A E LN+ I K RIM+S RDPS+RK+G GN+FIKNLD +IDNK
Sbjct: 127 YAYVNYLNAADAERALEQLNYSLIKNKACRIMWSQRDPSLRKTGQGNIFIKNLDETIDNK 186
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
AL DTFAAFG +LSCKVA D +G SKGYGFV + E+A+ AIK +NGM +NDK V+VG+
Sbjct: 187 ALHDTFAAFGDILSCKVATDEHGASKGYGFVHYVTGESAEAAIKGVNGMQLNDKVVFVGI 246
Query: 191 FVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRC 248
V R++R + V +FTN+Y+ NL T E+L ++FG FG ITSA V D GK R
Sbjct: 247 HVPRRDRQAKIDEVRSQFTNLYIKNLPTETTTEELNEVFGKFGPITSAAVQSDEHGKHRG 306
Query: 249 FGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLK 308
FGFVN+++ ++A+ AV+ L+ V YV RAQKR ER+A+L+ EQ++ K +
Sbjct: 307 FGFVNYENHESASKAVDALHDKDYKGNVLYVARAQKRTERDAELKKAHEQQKYETTLKYQ 366
Query: 309 GANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALN 368
G NLY+KNLDD +DEKL+ F+ FGTITSCKVM D+ G SKG GF FS P+EAT+A+
Sbjct: 367 GVNLYVKNLDDEYDDEKLQNEFTPFGTITSCKVMKDEKGTSKGFGFVCFSSPDEATKAVA 426
Query: 369 EMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQ 428
EMNGKM+G KPLYV++AQRKE RK +L+AQ +Q A+GIPG +GAP P
Sbjct: 427 EMNGKMLGSKPLYVSLAQRKEVRKQQLEAQMSQRSQMRSQQIAAAGIPGAPYGAP---PN 483
Query: 429 QLYYG-----------------QGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIM----- 466
+Y+G G P MPP+ Y Q+ P PGG Y
Sbjct: 484 PMYFGGAAAYPPHGGRGMMYPPNGMPAGMPPRPR-YAPPGQMAPMGMPGGAPYPPHPQDY 542
Query: 467 ---------------------PYHLQRQVHPGQRTG-------VRRSGNTHQMQQPQFMR 498
P HL P R G + G+ P MR
Sbjct: 543 PGYPVGGPVPPVGGMRGIPGPPAHLGGPNPPNFRGGNGAPIPPMNGRGSAPSTNGPGSMR 602
Query: 499 NSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASP 558
+ +R+G S +S V VS + P+ +ALA ASP
Sbjct: 603 GAP------PQSRDGYAPSSLSGRAVSHRVSDI------------APVGLSPAALAKASP 644
Query: 559 DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
++ +MLGE LYP + +P A K+TGM+LE++ E++HL+E+ AL KV EA+ VL
Sbjct: 645 AEQKQMLGEALYPQIAEKQPEKAGKITGMILEIENAELIHLLENRPALDAKVQEAVQVLD 704
Query: 619 E 619
E
Sbjct: 705 E 705
>gi|390476078|ref|XP_002759394.2| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 633
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 293/648 (45%), Positives = 390/648 (60%), Gaps = 67/648 (10%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK +FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKDLFG---PALSVKVMTDESGKSKGFGFVSFERHEDAQK 243
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 244 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 303
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 304 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 362
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 363 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYY 420
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTG 481
P Q+ + +P A + FQ PG +RP P P+ R P +
Sbjct: 421 PPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMST 476
Query: 482 VRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFE 527
R + + Q P+ +R Q +Y RN Q V+M
Sbjct: 477 QRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM------ 529
Query: 528 VSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGM
Sbjct: 530 --QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGM 581
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
LLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 582 LLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 629
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LK+L FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKDL---FGPALSVKVMTDE 223
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 224 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 281
>gi|403169799|ref|XP_003329214.2| hypothetical protein PGTG_10266 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168425|gb|EFP84795.2| hypothetical protein PGTG_10266 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 804
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 289/661 (43%), Positives = 382/661 (57%), Gaps = 74/661 (11%)
Query: 11 AAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLG 70
+++ + T A P+ N SLYVG+L+ V E+ LY++FS + V S+RVCRD R SLG
Sbjct: 156 SSIATTTPNASPASQPNTSLYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLG 215
Query: 71 YAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNK 130
YAYVNY N DA A E LN+ I K RIM+S RDPS+RK+G GN+FIKNLD +IDNK
Sbjct: 216 YAYVNYLNAADAERALEQLNYSLIKNKACRIMWSQRDPSLRKTGQGNIFIKNLDETIDNK 275
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
AL DTFAAFG +LSCKVA D +G SKGYGFV + E+A+ AIK +NGM +NDK V+VG+
Sbjct: 276 ALHDTFAAFGDILSCKVATDEHGASKGYGFVHYVTGESAEAAIKGVNGMQLNDKVVFVGI 335
Query: 191 FVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRC 248
V R++R + V +FTN+Y+ NL T E+L ++FG FG ITSA V D GK R
Sbjct: 336 HVPRRDRQAKIDEVRSQFTNLYIKNLPTETTTEELNEVFGKFGPITSAAVQSDEHGKHRG 395
Query: 249 FGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLK 308
FGFVN+++ ++A+ AV+ L+ V YV RAQKR ER+A+L+ EQ++ K +
Sbjct: 396 FGFVNYENHESASKAVDALHDKDYKGNVLYVARAQKRTERDAELKKAHEQQKYETTLKYQ 455
Query: 309 GANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALN 368
G NLY+KNLDD +DEKL+ F+ FGTITSCKVM D+ G SKG GF FS P+EAT+A+
Sbjct: 456 GVNLYVKNLDDEYDDEKLQNEFTPFGTITSCKVMKDEKGTSKGFGFVCFSSPDEATKAVA 515
Query: 369 EMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQ 428
EMNGKM+G KPLYV++AQRKE RK +L+AQ +Q A+GIPG +GAP P
Sbjct: 516 EMNGKMLGSKPLYVSLAQRKEVRKQQLEAQMSQRSQMRSQQIAAAGIPGAPYGAP---PN 572
Query: 429 QLYYG-----------------QGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIM----- 466
+Y+G G P MPP+ Y Q+ P PGG Y
Sbjct: 573 PMYFGGAAAYPPHGGRGMMYPPNGMPAGMPPRPR-YAPPGQMAPMGMPGGAPYPPHPQDY 631
Query: 467 ---------------------PYHLQRQVHPGQRTG-------VRRSGNTHQMQQPQFMR 498
P HL P R G + G+ P MR
Sbjct: 632 PGYPVGGPVPPVGGMRGIPGPPAHLGGPNPPNFRGGNGAPIPPMNGRGSAPSTNGPGSMR 691
Query: 499 NSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASP 558
+ +R+G S +S V VS + P+ +ALA ASP
Sbjct: 692 GAP------PQSRDGYAPSSLSGRAVSHRVSDI------------APVGLSPAALAKASP 733
Query: 559 DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
++ +MLGE LYP + +P A K+TGM+LE++ E++HL+E+ AL KV EA+ VL
Sbjct: 734 AEQKQMLGEALYPQIAEKQPEKAGKITGMILEIENAELIHLLENRPALDAKVQEAVQVLD 793
Query: 619 E 619
E
Sbjct: 794 E 794
>gi|194672643|ref|XP_882298.3| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 19
[Bos taurus]
gi|297482024|ref|XP_002692514.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Bos taurus]
gi|296480945|tpg|DAA23060.1| TPA: polyadenylate-binding protein 1-like [Bos taurus]
Length = 613
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 278/610 (45%), Positives = 378/610 (61%), Gaps = 32/610 (5%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
GY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 7 GYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAE 66
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A + +NF I G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +L
Sbjct: 67 RALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNIL 126
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--N 201
SCKV D +G S+G+GFV FE EAAQNAI +NGML+ND++V+VG F R+ER +
Sbjct: 127 SCKVVCDEHG-SRGFGFVHFETHEAAQNAISTMNGMLLNDRKVFVGHFKSRREREVELGA 185
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
+ +FTN+YV NL V ++ L+ +F FG + S VM+D G SR FGFVNF+ + A
Sbjct: 186 RAMEFTNIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQ 245
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV +NG + ++ YVGRAQKR ER+ +L+ +FEQ + R + +G NLY+KNLDDSI
Sbjct: 246 KAVVNMNGREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSI 305
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DEKL++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG+++G KPLY
Sbjct: 306 DDEKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLY 364
Query: 382 VAVAQRKEERKARLQAQFAQ----IRAPGG------MSPLASGIPGYHHGAPRLGPQQLY 431
VA+AQRKEERKA L Q+ Q +RA GG P + +P P+ Q Y
Sbjct: 365 VALAQRKEERKAILTNQYMQRLSTMRALGGPILGSFQQPASYFLP----AVPQPPAQAPY 420
Query: 432 YGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQM 491
YG G P P+ RP + + P + R+ P G R +TH
Sbjct: 421 YGSGPPIQPAPRWTAQ--------PPRPSCASVVRPAAMSRR--PLTPVGSSRQVSTHVP 470
Query: 492 QQ-PQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVP-ISTL 549
P R +N G + + G ++ + V+ P V VP L
Sbjct: 471 HLVPHTQRVANIGTQTTGPSMTGCSTPSRPLLTHTYSTPAHRTDRVQEP-AVHVPGQEPL 529
Query: 550 TSALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
T+++ +A+P ++ +M+GE+L+PLV N+ A K+TGMLLE+D +E+L ++ESPE+L
Sbjct: 530 TASMLAAAPLHEQKQMIGERLFPLVYNVHAHLAGKITGMLLEIDNSELLLMLESPESLNA 589
Query: 609 KVAEAMAVLQ 618
KV EA+AVLQ
Sbjct: 590 KVEEALAVLQ 599
>gi|148232824|ref|NP_001080204.1| polyadenylate-binding protein 1-A [Xenopus laevis]
gi|623598|gb|AAA60936.1| poly(A)-binding protein [Xenopus laevis]
Length = 633
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 289/649 (44%), Positives = 396/649 (61%), Gaps = 64/649 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL Q+V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+P+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N + + DE LK++FG +G S VM D +GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ---ERISRYEKLKGANLYLKNLDD 319
AV+++ G N K +VGRAQK+ ER+ +L+ KFEQ +RI+RY+ G NLY+KNLDD
Sbjct: 247 AVDEMYGKDMNGKSMFVGRAQKKVERQTELKRKFEQMNQDRITRYQ---GVNLYVKNLDD 303
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
I+DE+L++ F FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KP
Sbjct: 304 GIDDERLRKEFLPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362
Query: 380 LYVAVAQRKEERKARLQAQFAQ----IRAPGGM---------SPLASGIPGYHHGAPRLG 426
LYVA+AQRKEER+A L Q+ Q +R P + S + IP + A
Sbjct: 363 LYVALAQRKEERQAHLTNQYMQRMASVRVPNPVINPYQPPPSSYFMAAIPPAQNRAAYYP 422
Query: 427 PQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGP-----NYIMPYHLQ-RQVHPGQR 479
P Q+ + +P A + FQ PG +RP P + + P Q +V QR
Sbjct: 423 PGQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPTAPRPPTFSTMRPASNQVPRVMSAQR 480
Query: 480 ---TGVRRSGNTHQMQQ----------PQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPF 526
T + G PQ+ + G+R N ++ Q V+M
Sbjct: 481 VANTSTQTMGPRPTTAAAAAASAVRAVPQYKYAA--GVR---NQQHLNTQPQVAM----- 530
Query: 527 EVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTG 586
PA V+ P+ S LA+A P ++ +MLGE+L+PL++ + P A K+TG
Sbjct: 531 ---QQPAVHVQGQEPL------TASMLAAAPPQEQKQMLGERLFPLIQAMHPTLAGKITG 581
Query: 587 MLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLAV 635
MLLE+D +E+LH++ESPE+L+ KV EA+AVLQ A+ + + + V
Sbjct: 582 MLLEIDNSELLHMLESPESLRLKVDEAVAVLQAHQAKEAAQKVVNATGV 630
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 167/297 (56%), Gaps = 16/297 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I + V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A++K+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN D +NDE+LKE+F ++G S KVM D
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDD 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQI 402
+G SKG GF +F E+A +A++EM GK + K ++V AQ+K ER+ L+ +F Q+
Sbjct: 227 NGKSKGFGFVSFERHEDAQKAVDEMYGKDMNGKSMFVGRAQKKVERQTELKRKFEQM 283
>gi|296200520|ref|XP_002747628.1| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 614
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 272/608 (44%), Positives = 381/608 (62%), Gaps = 24/608 (3%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SGY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 6 SGYPLASLYVGDLHPDVTEAMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF + G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +
Sbjct: 66 ERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNI 125
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKVA D +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F R+ERA +
Sbjct: 126 LSCKVACDKHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRRERAAELG 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +FTN+YV NL V ++ L+ +F FG + S VM+D+ G+SRCFGFVNF+ + A
Sbjct: 185 ARALEFTNIYVKNLPADVDEQGLQDLFSQFGKMLSVKVMRDNSGRSRCFGFVNFEKHEEA 244
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
AV +NG + ++ Y RAQKR ER+ +L+ KFEQ + R + +G NLY+KNLDDS
Sbjct: 245 QKAVVHMNGKEVSGRLLYASRAQKRVERQNELKRKFEQMKQDRLSRYQGVNLYVKNLDDS 304
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
I+D+KL++ FS +G ITS KVM + SKG GF FS PEEAT+A+ EMNG+++G KPL
Sbjct: 305 IDDDKLRKEFSPYGVITSAKVMTEG-SHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 363
Query: 381 YVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPG--------YHHGAPRLGPQQLYY 432
YVA+AQRKEERKA L Q+ Q + M L++ + G + P+ Q YY
Sbjct: 364 YVALAQRKEERKAILTNQYMQRLS--TMRTLSNPLLGSFQQPSSYFLPAVPQPPAQAAYY 421
Query: 433 GQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ 492
G G + P Q A Q RP + + P + R P + VR++
Sbjct: 422 GCGP--VTPTQPAPRWTSQPP----RPSCASMVRPPVMPR-CPPAHISSVRQASTQVPRT 474
Query: 493 QPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVP-ISTLTS 551
P R +N G + + G ++P + V+ P V +P LT+
Sbjct: 475 VPHTQRVANIGTQTTGPSGVGCCTPGRPLLPYKCSSAAHSTDQVQEP-AVHIPGHEPLTA 533
Query: 552 ALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
++ +A+P ++ +M+GE+LYPL+ ++ A K+TGMLLE+D +E+L ++ESPE+L K+
Sbjct: 534 SMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKI 593
Query: 611 AEAMAVLQ 618
EA+AVLQ
Sbjct: 594 DEAVAVLQ 601
>gi|405977322|gb|EKC41780.1| Polyadenylate-binding protein 4 [Crassostrea gigas]
Length = 646
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 299/647 (46%), Positives = 400/647 (61%), Gaps = 51/647 (7%)
Query: 16 ATTAAVPSG--YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAY 73
+TT P+G Y SLYVGDL +V E+ L++ FS V+S+RVCRD R SLGYAY
Sbjct: 2 STTTMNPAGPSYPMASLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAY 61
Query: 74 VNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALC 133
VN+ P DA A + +NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL
Sbjct: 62 VNFQQPADAERALDTMNFDTIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALY 121
Query: 134 DTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVR 193
DTF+AFG +LSCK+ D +G S+GYGFV FE EEAA+ AI+ +NGML+N K+V+VG F+
Sbjct: 122 DTFSAFGNILSCKIVCDEHG-SRGYGFVHFETEEAARIAIEKVNGMLLNGKKVFVGRFMS 180
Query: 194 RQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFG 250
R+ER + + KF NVYV N +E + DE L+ +F +G I SA VM D GK + FG
Sbjct: 181 RRERLEVLGDKMRKFNNVYVKNFSEEINDETLRDMFEPYGKIISAKVMTDDGSGKGKGFG 240
Query: 251 FVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGA 310
FV+F+ P+AA AVE LNG N+ K+ YVGRAQK+ ER+A+L+ KFE+ R+ R + +G
Sbjct: 241 FVSFEDPEAAEKAVEALNGNDNSGKILYVGRAQKKIERQAELKEKFERIRMERINRYQGV 300
Query: 311 NLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEM 370
NLY+KNLDD+I+DE+L++ F++FGTITS KVM + G SKG GF FS PEEAT+A+ EM
Sbjct: 301 NLYVKNLDDNIDDERLRKEFAQFGTITSAKVMTE-GGRSKGFGFVCFSSPEEATKAVTEM 359
Query: 371 NGKMIGRKPLYVAVAQRKEERKARLQAQFAQ----IRAPGGMSPLAS-----GIPGYHHG 421
NG+++ KPLYVA+AQRKE+RKA L +Q+ Q +R G S G GY
Sbjct: 360 NGRIVVAKPLYVALAQRKEDRKAHLASQYMQRITSMRMQGQQIGQVSQMFQPGSAGYF-- 417
Query: 422 APRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQ-RQVHPGQRT 480
P + Q Y TP MP + +Q V P +PG MP Q RQ P +T
Sbjct: 418 VPTMPQAQRTY--FTPNNMPAMRSNPRWQTTVRPTGQPGSGFQTMPGAPQIRQQRPTGQT 475
Query: 481 GVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPV---------------- 524
VR + + N+ Q + ++ G Q VP
Sbjct: 476 NVRAGVSARPITGQSGTPNAQQRMP-VNQQVGGRPQGGQPTVPAAANRQQGYKSYGGGQM 534
Query: 525 ----PFEVSGMPATPVETPRPVPV----PISTLTSALASASPDDRTRMLGEQLYPLVENI 576
P + GM P P+ V V P++ + LA+A P ++ +MLGE+L+PL+ +
Sbjct: 535 MKQQPGQTPGMQQAP---PQAVIVQGQDPLT--ATMLATAPPQEQKQMLGERLFPLISTM 589
Query: 577 EPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAAR 623
P A K+TGMLLE+D +E+LH++ES E+L+ KV EA+AVLQ A+
Sbjct: 590 FPDLAGKITGMLLEIDNSELLHMLESQESLEAKVKEAVAVLQAHQAK 636
>gi|332030569|gb|EGI70257.1| Polyadenylate-binding protein 1 [Acromyrmex echinatior]
Length = 657
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 295/672 (43%), Positives = 392/672 (58%), Gaps = 91/672 (13%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQD--- 81
Y SLYVG+L ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P D
Sbjct: 8 YPMASLYVGNLHTDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADVVV 67
Query: 82 -------------------AANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKN 122
A A + +NF I G+PIRIM+S RDPS+RKSG GNVFIKN
Sbjct: 68 VGDGGSGGGGCGSGSGSQRAERALDTMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKN 127
Query: 123 LDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIN 182
LD +IDNKA+ DTF+AFG +LSCKV D +G SKGYGFV FE EEAA +I+ +NGML+N
Sbjct: 128 LDKNIDNKAMYDTFSAFGNILSCKVTQDESGASKGYGFVHFETEEAANKSIEKVNGMLLN 187
Query: 183 DKQVYVGLFVRRQERAQQNVSPK---FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVM 239
K+VYVG F+ R+ER Q+ + K FTNVYV N E +TD+ LK++F +GTITS VM
Sbjct: 188 GKKVYVGKFIPRKER-QKELGEKAKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVM 246
Query: 240 KDSDGKSRCFGFVNFQSPDAAAAAVEKLNGT-TNNDKVWYVGRAQKRAEREADLRAKFEQ 298
DGKSR FGFV F+ P++A AV LNG K YVGRAQK+AER+ +L+ KFEQ
Sbjct: 247 IKDDGKSRGFGFVAFEDPNSAEQAVLDLNGKEIAEGKCMYVGRAQKKAERQQELKRKFEQ 306
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
+I R + +G NLY+KNLDD+I+DE+L++ F+ FGTITS KVM+++ G SKG GF FS
Sbjct: 307 LKIERLNRYQGVNLYVKNLDDTIDDERLRKEFTPFGTITSAKVMMEE-GRSKGFGFVCFS 365
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGI--P 416
PEEAT+A+ EMNG+++G KPLYVA+AQRKE+RKA L +Q+ Q A M + P
Sbjct: 366 QPEEATKAVTEMNGRIVGSKPLYVALAQRKEDRKAHLASQYMQRMANMRMQQMGQIFHQP 425
Query: 417 GY--HHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMP------- 467
G + P L Q +YG P Q A Q + P P PN + P
Sbjct: 426 GNAGSYFVPTLPQPQRFYG-------PAQMA----QIRATPRW-PAQPNQVRPNAQTGNS 473
Query: 468 ---------------------YHLQRQVHPGQRTGVRRSGNTHQMQ---------QPQFM 497
L+ + TG++ N Q + P
Sbjct: 474 GFASMQAAPFRAAPRAPAAQAGALRNNMSARPITGLQAVSNNMQSRSMAGPAVGVSPGQS 533
Query: 498 RNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASAS 557
R SN +Y N RN ++ +P P S A ++ P+ S LA+A
Sbjct: 534 RPSN--YKYTANMRNPPQAAMA--LPTPSGPSMQQAVHIQGQEPL------TASMLAAAP 583
Query: 558 PDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVL 617
P ++ +MLGE+L+PL+ ++ P K+TGMLLE+D +E+LH++E E+LK KV EA+AVL
Sbjct: 584 PQEQKQMLGERLFPLIHDMNPQLTGKITGMLLEIDNSELLHMLEHKESLKAKVDEAVAVL 643
Query: 618 QEAAARSDVNEK 629
Q A+ V K
Sbjct: 644 QAHQAKQAVAPK 655
>gi|426242065|ref|XP_004014898.1| PREDICTED: polyadenylate-binding protein 1-like [Ovis aries]
Length = 611
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 277/610 (45%), Positives = 376/610 (61%), Gaps = 34/610 (5%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
GY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 7 GYPLASLYVGDLPPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAE 66
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A + +NF I G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +L
Sbjct: 67 RALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNIL 126
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--N 201
SCKV D +G S+G+GFV FE EAAQNAI +NGML+ND++V+VG F R+ER +
Sbjct: 127 SCKVVCDEHG-SRGFGFVHFETHEAAQNAISTMNGMLLNDRKVFVGHFKSRREREVELGA 185
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
+ +FTN+YV NL V ++ L+ +F FG + S VM+D G SR FGFVNF+ + A
Sbjct: 186 RAMEFTNIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQ 245
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV +NG + ++ YVGRAQKR ER+ +L+ +FEQ + R + +G NLY+KNLDDSI
Sbjct: 246 KAVVNMNGREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSI 305
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DEKL++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG+++G KPLY
Sbjct: 306 DDEKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLY 364
Query: 382 VAVAQRKEERKARLQAQFAQ----IRAPGG------MSPLASGIPGYHHGAPRLGPQQLY 431
VA+AQRKEERKA L Q+ Q +RA GG P + +P P+ Q Y
Sbjct: 365 VALAQRKEERKAILTNQYMQRLSTMRALGGPVLGSFQQPASYFLP----AVPQPPAQAQY 420
Query: 432 YGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNY-IMPYHLQRQVHPGQRTGVRRSGNTHQ 490
YG G P P+ +P P+ +P + R+ P G R +TH
Sbjct: 421 YGSGPPIQPAPRWTA-----------QPPRPSCDRLPARVSRR--PLAPVGSSRQLSTHM 467
Query: 491 MQQ-PQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTL 549
P R +N G + + + G ++ + V+ P + L
Sbjct: 468 PHLVPHTQRVANIGTQTIGPSVTGCSTPSRPLLTHKYSTPAHCTDRVQEPAVCVLGQEPL 527
Query: 550 T-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
T S LA+A ++ +M+GE+L+PLV N+ A K+TGMLLE+D +E+L ++ESPE+L
Sbjct: 528 TASTLAAAPLHEQKQMIGERLFPLVYNVHAHLAGKITGMLLEIDNSELLLMLESPESLNA 587
Query: 609 KVAEAMAVLQ 618
KV EA+AVLQ
Sbjct: 588 KVEEALAVLQ 597
>gi|73992493|ref|XP_534430.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Canis lupus
familiaris]
Length = 611
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 276/612 (45%), Positives = 376/612 (61%), Gaps = 37/612 (6%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
G+ SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 7 GFPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAE 66
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A + +NF I G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +L
Sbjct: 67 RALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNIL 126
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--N 201
SCKV D +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F R+ER +
Sbjct: 127 SCKVVCDDHG-SRGFGFVHFETHEAAQQAITTMNGMLLNDRKVFVGHFKSRREREVELGA 185
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
+ +FTN+YV NL V ++ L+ +F FG + S VM+D G SR FGFVNFQ + A
Sbjct: 186 RAMEFTNIYVKNLHVDVDEQGLQDLFSRFGKMLSVKVMRDDSGHSRGFGFVNFQKHEEAQ 245
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV +NG + ++ YVGRAQKR ER+++L+ +FEQ + R + +G NLY+KNLDDSI
Sbjct: 246 KAVMDMNGKEVSGRLLYVGRAQKRVERQSELKRRFEQLKQDRLTRYQGVNLYVKNLDDSI 305
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DEKL++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG+++G KPLY
Sbjct: 306 DDEKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRILGTKPLY 364
Query: 382 VAVAQRKEERKARLQAQFAQ----IRAPGG------MSPLASGIPGYHHGAPRLGPQQLY 431
VA+AQRKEERKA L Q+ Q +RA GG P + +P P+ Q Y
Sbjct: 365 VALAQRKEERKAILTNQYMQRLSTVRALGGPLLGSFHQPTSYFLP----SVPQPPAQAAY 420
Query: 432 YGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQM 491
Y G P P+ P RP + + P + R+ P Q + VR++
Sbjct: 421 YASGLPMQPTPRWTA--------PPPRPSSASVVRPPAMSRRP-PAQVSSVRQASTQVPP 471
Query: 492 QQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATP----VETPRPVPVPIS 547
P R +N G + G S P P+ V+ P +
Sbjct: 472 PVPHTQRVANIGTQ-----TTGASGVGYSTPGGPLLTHRYPSATHNHGVQEPAVRILGQE 526
Query: 548 TLTSALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEAL 606
LT+++ +A+P ++ +M+GE+LYPL+ N A K+TGMLLE+D +E+L ++ESPE+L
Sbjct: 527 PLTASMLAAAPLHEQKQMIGERLYPLIYNTHTQLAGKITGMLLEIDNSELLLMLESPESL 586
Query: 607 KTKVAEAMAVLQ 618
KV EA+AVLQ
Sbjct: 587 NAKVEEALAVLQ 598
>gi|348502707|ref|XP_003438909.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Oreochromis niloticus]
Length = 623
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 283/626 (45%), Positives = 375/626 (59%), Gaps = 41/626 (6%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
Y SLYVGDL +V E+ LY FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 7 AYPLASLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYVNFQQPADAE 66
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A + +N+ I G+PIRIM+S RDP +RKSG GN+FIKN+D SIDNKAL DTF+AFG +L
Sbjct: 67 CALDTMNYDVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFSAFGNIL 126
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--N 201
SCKV D G SKGYGFV FE +EAA AI+ +NGML+ND++V+VG F R+ER + +
Sbjct: 127 SCKVVCDEKG-SKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKEREVEFGS 185
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
+ KFTNVY+ N E TDE LK++F FG S VMKD G+SR FGFVN+ + A
Sbjct: 186 KAMKFTNVYIKNFGEDFTDEKLKEVFSAFGRTLSVRVMKDEKGRSRGFGFVNYAHHEDAQ 245
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV ++NG N K+ YVGRAQKR ER+ +L+ KF+Q + R ++ +G NLY+KNLDDSI
Sbjct: 246 KAVNEMNGKEINGKILYVGRAQKRLERQGELKRKFDQIKQDRIQRYQGVNLYVKNLDDSI 305
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DE+L++ F+ +GTITS KVM D SKG GF FS PEEAT+A+ EMNG+++ KPLY
Sbjct: 306 DDERLRKEFAPYGTITSAKVMTDGSQ-SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLY 364
Query: 382 VAVAQRKEERKARLQAQFAQIRAP--GGMSPLASGI--PGYHHGAPRLGPQQLYYGQGTP 437
VA+AQR+EERKA L ++ Q A SPL GY+ P+ + Y
Sbjct: 365 VALAQRREERKAILTNKYMQRLATLRTMASPLIDSYHQSGYYVTLPQPPMRSFYNHSAVS 424
Query: 438 GLMP-PQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQ--MQQP 494
+ P P+ G RP G PY Q R G Q Q P
Sbjct: 425 SVRPVPRWTGQ--------PPRPQG-----PYTTQLVSGSVPRRGSTPIATVRQASTQAP 471
Query: 495 QFMRNSNQ----------GIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPV-------E 537
+ + ++ + G + + + S V P +V +PA V E
Sbjct: 472 RIVTSTQKTNDIGTQTVGGRTDIASVARSSQYKYASAVRNPQQVVTVPAPMVHNDLQLME 531
Query: 538 TPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVL 597
P + P S LA+A P D+ ++LGE+LYPL+ + P A K+TGMLLE+D +E+L
Sbjct: 532 PPVHIQGPEPLTASVLAAAPPMDQKQLLGERLYPLIHALHPNLAGKITGMLLEIDNSELL 591
Query: 598 HLIESPEALKTKVAEAMAVLQEAAAR 623
H++ES E+L KV EA+AVLQ A+
Sbjct: 592 HMLESQESLHAKVDEAIAVLQAHQAK 617
>gi|301624826|ref|XP_002941699.1| PREDICTED: polyadenylate-binding protein 4-like [Xenopus (Silurana)
tropicalis]
Length = 632
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 300/659 (45%), Positives = 402/659 (61%), Gaps = 88/659 (13%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P D
Sbjct: 6 SSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADG 65
Query: 83 ANAKEALNFMPI-----NGKPIRIMY-SHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTF 136
+ M + GK +++ S RDPS+RKSG GNVFIKNLD SIDNKAL DTF
Sbjct: 66 EYGNLLFDRMDVCFHVAGGKAFTLLWFSERDPSLRKSGVGNVFIKNLDKSIDNKALYDTF 125
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
+AFG +LSCKV D NG SKGY FV FE ++AA AI+ +NGML+ND++V+VG F R+E
Sbjct: 126 SAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKCRRE 184
Query: 197 RAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNF 254
R + + +FTNVY+ N E + DE LK+ F +G S VM D GKS+ FGFV+F
Sbjct: 185 REAELGAKAKEFTNVYIKNFGEDMDDERLKETFSKYGKTLSVKVMTDPSGKSKGFGFVSF 244
Query: 255 QSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ---ERISRYEKLKGAN 311
+ + A AV+ +NG N K+ +VGRAQK+ ER+A+L+ +FEQ ERISRY+ G N
Sbjct: 245 ERHEDANKAVDDMNGKDVNGKIMFVGRAQKKVERQAELKRRFEQLKQERISRYQ---GVN 301
Query: 312 LYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMN 371
LY+KNLDD+I+DEKL++ FS FG+ITS KVM+++ G SKG GF FS PEEAT+A+ EMN
Sbjct: 302 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEE-GRSKGFGFVCFSSPEEATKAVTEMN 360
Query: 372 GKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPL-ASGIPGYHHGAPRLGPQQL 430
G+++G KPLYVA+AQRKEERKA L Q+ Q A GM L A+ + AP
Sbjct: 361 GRIVGSKPLYVALAQRKEERKAHLTNQYMQRIA--GMRALPANTLINQFQPAPG------ 412
Query: 431 YYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPG---QRTG------ 481
G P + PQ P Y P H+ Q+ PG Q+TG
Sbjct: 413 --GYFVPAV--PQTQSR--------------PTYYAPNHMA-QIRPGPRWQQTGRPQGFQ 453
Query: 482 -----VRRSGNTHQMQQPQFMRNSN-QGIRYLDNA--RNGTDQSVVSM------------ 521
+R+SG ++ M SN QG R + + R G S +M
Sbjct: 454 PMPNTLRQSGPRQSLRH---MPPSNTQGTRGIPSVTQRVGVSSSTQTMGPRPPVSAPPPR 510
Query: 522 -VPVPFEVSGMP---ATPVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPL 572
VP P++ + P P++TP+P V V P++ S LASA P ++ +MLGE+L+PL
Sbjct: 511 AVP-PYKYTRCPLPGVQPLQTPQPAVHVQGQEPLT--ASMLASAPPQEQKQMLGERLFPL 567
Query: 573 VENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLG 631
++ + P A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ D +K+G
Sbjct: 568 IQAMHPSLAGKITGMLLEIDNSELLHMLESPESLRSKVEEAVAVLQAHQAKKDAAQKVG 626
>gi|194880963|ref|XP_001974622.1| GG21846 [Drosophila erecta]
gi|190657809|gb|EDV55022.1| GG21846 [Drosophila erecta]
Length = 635
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 284/648 (43%), Positives = 376/648 (58%), Gaps = 82/648 (12%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL Q+VNES L++ FS V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLPQDVNESGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF + KPIRIM+S RDPS+R+SG GNVFIKNLD +IDNKA+ DTF+AFG +LSCKVA
Sbjct: 63 MNFDLLRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D G SKGYGFV FE EEAA +I +NGML+N K+VYVG F+ R+ER ++ + F
Sbjct: 123 TDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV N E DE LK+ F +G ITS VM DGKS+ FGFV F++ +AA AAV+
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQA 242
Query: 267 LNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LNG + K YV RAQK+AER+ +L+ KFE+ + R+E + G NLY+KNLDD+I+D++
Sbjct: 243 LNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDR 302
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L+ FS +G ITS KVM D+ G SKG GF F+ EAT A+ E+NG+++G KPLYVA+A
Sbjct: 303 LRIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALA 362
Query: 386 QRKEERKARLQAQFAQIRAPGGMSPL--------ASG---IPGYHHGAPRLGPQQLYYGQ 434
QRKEERKA L +Q+ + M L ASG +P + G Q +
Sbjct: 363 QRKEERKAHLASQYMRHMTGMRMQQLGQIFQPNTASGGFLVPTFQSNQRFFGSQVATQMR 422
Query: 435 GTPGLMP-------------------------------------------PQAAGYGFQQ 451
TP +P PQ G
Sbjct: 423 NTPRWVPQVRPPAAVQGVQAGAAAAGGFQGTAGAVPTQFRSAAAGARGAQPQVQGTHAAA 482
Query: 452 QVFPGLRPGGPNYIMPYHLQRQVHPG-QRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNA 510
+R G I Q+ P Q G + +G Q R SN +Y N
Sbjct: 483 AAANNMRNTGARAITG---QQTAAPNMQIPGAQIAGGAQQ-------RTSN--YKYTSNM 530
Query: 511 RNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLY 570
RN Q + P+P ++ G + + + S LA+A P ++ ++LGE+LY
Sbjct: 531 RNPPAQQLHQTQPIPQQLQGKNSEKL------------IASLLANAKPQEQKQILGERLY 578
Query: 571 PLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
P++E++ A K+TGMLLE++ +E+LH+IE EALK KV EA+AVLQ
Sbjct: 579 PMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQ 626
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEEATRALN 368
A+LY+ +L +N+ L E FS G + S +V D S G + F P +A RAL+
Sbjct: 2 ASLYVGDLPQDVNESGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 369 EMNGKMIGRKPLYVAVAQR 387
MN ++ KP+ + +QR
Sbjct: 62 TMNFDLLRNKPIRIMWSQR 80
>gi|148227542|ref|NP_001082094.1| embryonic polyadenylate-binding protein A [Xenopus laevis]
gi|94711253|sp|Q98SP8.2|EPABA_XENLA RecName: Full=Embryonic polyadenylate-binding protein A;
Short=Embryonic poly(A)-binding protein A; Short=ePAB-A;
Short=ePABP-A; AltName: Full=XePABP-A
gi|51258324|gb|AAH80020.1| EPAB protein [Xenopus laevis]
Length = 629
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 290/637 (45%), Positives = 386/637 (60%), Gaps = 51/637 (8%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A +GY SLY+GDL +V E+ LY+ FS ++S+RVCRD + R SL YAY+N+ P
Sbjct: 3 ATGAGYPLASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I G+PIRIM+S RDP +RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D +G S+GYGFV FE EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDEHG-SRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRREREL 181
Query: 200 QNVSP--KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E + D+ L++IF FG S VM D G+SR FGFVN+ +
Sbjct: 182 EYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AV ++NG N ++ YVGRAQKR ER+++L+ KFE QERI+RY+ G NLY+
Sbjct: 242 EEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQ---GVNLYV 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD I+D++L++ F +GTITS KVM + G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDGIDDDRLRKEFLPYGTITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ----IRA-PGGMSPLASGIPGYHHGAPRLGPQQ 429
+ KPLYVA+AQRKEERKA L Q+ Q +RA PG + Y A P +
Sbjct: 358 VSTKPLYVALAQRKEERKAILTNQYMQRLATMRAMPGPLLGSFQQPANYFLSAMPQPPNR 417
Query: 430 LYYGQG--TPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGN 487
+Y P PQ A + RP P Y P L R V P R S N
Sbjct: 418 TFYSPNPVAPVRPAPQWASHQS--------RP--PQYQPPTPLMRAVQPR-----RMSSN 462
Query: 488 THQMQQP--QFMRNSNQGIRYLD------NARNGTDQSVVSMVP----------VPFEVS 529
M+Q Q R + R + AR + S++ +P V VS
Sbjct: 463 ISTMKQASTQVPRVAQHSQRVANIGTQTAGARAQVNPSMMRTMPHYKYSCGVRNVQPIVS 522
Query: 530 GMPATPVETPRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGML 588
V P + LT S LA A P ++ +MLGE++YP++ + P A K+TGML
Sbjct: 523 STHLQQVMEPAVLMQGQEPLTASLLAGAPPQEQKQMLGERIYPVIHEMHPTLAGKITGML 582
Query: 589 LEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSD 625
LE+D +E+LH++ESPE+L +KV EA+AVLQ A+ +
Sbjct: 583 LEIDNSELLHMLESPESLHSKVEEAVAVLQAHQAKEN 619
>gi|82802761|gb|ABB92431.1| PABP3 [Aotus trivirgatus]
Length = 629
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 283/633 (44%), Positives = 389/633 (61%), Gaps = 42/633 (6%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R S YAYVN+ +P+DA +
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAEH 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S DPS+RKSG GN+F+KNLD SI+NKAL DT +AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQHDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +F NVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFEKHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDD 319
AV+++NG + K YVGRAQK+ ER+ +L+ KFE Q+RI+RY+ + NLY+KNLDD
Sbjct: 247 AVDEMNGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVV---NLYVKNLDD 303
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KP
Sbjct: 304 GIDDERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362
Query: 380 LYVAVAQRKEERKARLQAQFAQ----IRA-PGGMSP----LASGIPGYHHGAPRLGPQQL 430
LYVA+AQRKEER+A L ++ Q +RA P +P + +P + A P Q+
Sbjct: 363 LYVALAQRKEERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVPQTQNHAAYYPPSQI 422
Query: 431 YYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQ 490
+ +P A + FQ + +RPG P +P+ R + V R +T +
Sbjct: 423 ARLRPSPRWTAQGARPHPFQNKP-SAIRPGAPR--VPFSTMRPAS----SQVPRVMSTQR 475
Query: 491 MQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGM----------PATPVETPR 540
+ S Q + A V VP +G+ P ++ P
Sbjct: 476 VAN-----TSTQTVGPRPAAAAAAATPAVRTVPRYKYAAGVRNPQQHLNAQPEVTMQQPA 530
Query: 541 PVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHL 599
TLT S LASA P + +MLGE+L+PL+E + P A K+TGMLLE+D +E+LH+
Sbjct: 531 VHVQGQETLTASMLASAPPQKQKQMLGERLFPLIEAMRPTLAGKITGMLLEIDNSELLHM 590
Query: 600 IESPEALKTKVAEAMAVLQEAAARSDVNEKLGS 632
+ESPE+L +KV EA+AVLQ A+ + + S
Sbjct: 591 LESPESLGSKVDEAVAVLQAHQAKEATQKAVNS 623
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S Y +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQH 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
+ A++A+ +N +I K V + + V N++V NL +++ ++ L
Sbjct: 62 PKDAEHALDTMNFDVIKGKPVRIMWSQHDPSLRKSGVG----NIFVKNLDKSINNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TVSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L AK ++ N+Y+KN + ++DE+LK+LF +FG S KVM D+
Sbjct: 177 KEREAELGAKAKE----------FPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|403290728|ref|XP_003936459.1| PREDICTED: polyadenylate-binding protein 1-like [Saimiri
boliviensis boliviensis]
Length = 614
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 271/608 (44%), Positives = 379/608 (62%), Gaps = 24/608 (3%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SGY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 6 SGYPLASLYVGDLHPDVTEAMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF + G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +
Sbjct: 66 ERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNI 125
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKV D +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F R+ERA +
Sbjct: 126 LSCKVVCDEHG-SRGFGFVHFETYEAAQQAINTMNGMLLNDRKVFVGHFKSRRERAAELG 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +FTN+YV NL V ++ L+ +F FG + S VM+DS G+SRCFGFVNF+ + A
Sbjct: 185 ARALEFTNIYVKNLPADVDEQGLQDLFSQFGKMLSVKVMRDSSGRSRCFGFVNFEKHEEA 244
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
AV +NG + ++ Y RAQKR ER+ +L+ +FEQ + R + +G NLY+KNLDDS
Sbjct: 245 QKAVVHMNGKEVSGRLLYASRAQKRVERQNELKRRFEQMKQDRLSRYQGVNLYVKNLDDS 304
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
I+D KL++ FS +G ITS KVM + SKG GF FS PEEAT+A+ EMNG+++G KPL
Sbjct: 305 IDDGKLRKEFSPYGVITSAKVMTEG-SHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 363
Query: 381 YVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPG--------YHHGAPRLGPQQLYY 432
YVA+AQRKEERKA L Q+ Q + M L++ + G + P+ Q YY
Sbjct: 364 YVALAQRKEERKAILTNQYMQRVS--TMRTLSNPLLGSFQQPSSYFLPAVPQPPAQAAYY 421
Query: 433 GQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ 492
G G + P Q A Q RP + + P + R P G+R++
Sbjct: 422 GCGP--VTPTQPAPRWTSQPP----RPSCASMVRPPVMPR-CPPAHIGGIRQASTQVPRT 474
Query: 493 QPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVP-ISTLTS 551
P R +N G + + G ++P + V+ P V +P LT+
Sbjct: 475 VPHTQRVANIGTQTTGPSGVGCCTPGRPLLPYKCSSAAHSTDQVQEP-AVHIPGHEPLTA 533
Query: 552 ALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
++ +A+P ++ +M+GE+LYPL+ ++ A K+TGMLLE+D +E+L ++ESPE+L K+
Sbjct: 534 SMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKI 593
Query: 611 AEAMAVLQ 618
EA+AVLQ
Sbjct: 594 DEAVAVLQ 601
>gi|301120388|ref|XP_002907921.1| polyadenylate-binding protein 1-B [Phytophthora infestans T30-4]
gi|262102952|gb|EEY61004.1| polyadenylate-binding protein 1-B [Phytophthora infestans T30-4]
Length = 640
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 300/622 (48%), Positives = 391/622 (62%), Gaps = 55/622 (8%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ SLYVGD+ +V E+ L+++F+ V V S+RVCRD R SLGYAYVN+ N DA
Sbjct: 42 FHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAER 101
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G P RIM+S RDPS+RKSG GN+F+KNLDTSIDNKAL DTF+ FG +LS
Sbjct: 102 ALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILS 161
Query: 145 CKVAID-SNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS 203
CKVAI+ + G SKGYG+V +E EAA AI +NGMLI +V+VG F +RQ+R +
Sbjct: 162 CKVAIEHTTGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGQFQKRQDRPDAD-- 219
Query: 204 PKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG--KSRCFGFVNFQSPDAAA 261
+TN YV N+ TD DL K F FG + SA+VMKD+ +R FGFVN++ DAA
Sbjct: 220 -DWTNCYVKNIPTQWTDADLLKEFEPFGKVLSAVVMKDNANPDHNRGFGFVNYEESDAAH 278
Query: 262 AAVEKLNGTT-----NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
AV+ LNG + D YVG+AQKR+ERE +LR KFEQ ++ R K +G NLY+KN
Sbjct: 279 KAVDALNGKSYPAGEGLDTEMYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKN 338
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
LDD ++D++L+E F+E GTITS +VM D +G S+G GF FS PEEA +A+ EMNGK+I
Sbjct: 339 LDDQLSDDELREAFAECGTITSSRVMRDPNGNSRGFGFVCFSTPEEANKAVAEMNGKLIS 398
Query: 377 RKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGT 436
KP+YVA+AQRKE R+A+L+AQ AQ RA GM + G+P P G ++YGQ
Sbjct: 399 GKPVYVALAQRKEVRRAQLEAQHAQQRA--GMV-VGRGMP--MGQPPMYGAAPMFYGQ-- 451
Query: 437 PGLMPPQA-AGYGFQQQVFP----------GLR------PGG---PNYIMPYHLQRQVHP 476
PG +PPQA G+ + QQ+ P G R PGG P Y MP QR
Sbjct: 452 PGQLPPQARQGFMYPQQMMPRGVQRGPMPYGARVPGAPAPGGYPMPGYGMPMQQQRGQ-- 509
Query: 477 GQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPV 536
R G + G P RN +Y NARN + V +P PA PV
Sbjct: 510 -PRRGRQGPGPQGPQGAPANRRN----FKYTANARNHPARDVPPQGVMP------PAAPV 558
Query: 537 ETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEV 596
+ P P+ ++ALA+ASP+ + M+GE+LYPL+ +P A K+TGMLLEMD E+
Sbjct: 559 QNAGPEPL----TSAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGEL 614
Query: 597 LHLIESPEALKTKVAEAMAVLQ 618
LHL+ESPEAL+ K+ EAM VL+
Sbjct: 615 LHLLESPEALEAKIQEAMTVLE 636
>gi|340719920|ref|XP_003398392.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Bombus
terrestris]
Length = 609
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 291/640 (45%), Positives = 381/640 (59%), Gaps = 75/640 (11%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD +IDNKA+ DTF+AFG +LS
Sbjct: 68 ALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA D +G SKGYGFV FE EEAA +I +NGML+N K++
Sbjct: 128 CKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKL------------------ 169
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTNVYV N E +TD+ LK++F +GTITS VM DGKSR FGFV F+ PDAA AV
Sbjct: 170 -FTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAV 228
Query: 265 EKLNGT-TNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIND 323
+LNG K YVGRAQK+AER+ +L+ KFEQ ++ R + +G NLY+KNLDDSI+D
Sbjct: 229 LELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDD 288
Query: 324 EKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVA 383
E+L++ F+ FGTITS KVM+++ G SKG GF FS PEEAT+A+ EMNG++I KPLYVA
Sbjct: 289 ERLRKEFAPFGTITSAKVMMEE-GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVA 347
Query: 384 VAQRKEERKARLQAQF------------AQIRAPGGMSPLASGIPGYHHGAPRLGPQQLY 431
+AQRKE+RKA L +Q+ QI PGG +P GP Q+
Sbjct: 348 LAQRKEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYF--VPTIPQPQRFYGPAQMA 405
Query: 432 YGQGTPGLMPPQ-----------AAGYGFQQQVF------PGLRPGGPNYIMPYHLQRQV 474
+ TP P Q ++G+ Q F P +PG M L +
Sbjct: 406 QIRTTP-RWPAQPNQVRPNAQTGSSGFATMQGPFRAAPRAPTAQPGA----MRSTLSARP 460
Query: 475 HPGQRTGVRRSGNTHQMQQPQF-----MRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVS 529
GQ+T + + M P R SN +Y N RN Q++ +P P
Sbjct: 461 ITGQQTVGGANMQSRSMAGPAVGVSAQSRPSN--YKYTSNMRN-PPQAMA--IPTP---- 511
Query: 530 GMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
TPV+ + S LA+A P ++ +MLGE+L+PL++ + P K+TGMLL
Sbjct: 512 ----TPVQQAVHIQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLL 567
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEK 629
E+D +E+LH++E E+LK KV EA+AVLQ A+ V K
Sbjct: 568 EIDNSELLHMLEHNESLKAKVEEAVAVLQAHQAKQAVASK 607
>gi|410953832|ref|XP_003983574.1| PREDICTED: polyadenylate-binding protein 1-like [Felis catus]
Length = 616
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 280/623 (44%), Positives = 384/623 (61%), Gaps = 34/623 (5%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
GY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 7 GYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAE 66
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A + +NF I G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +L
Sbjct: 67 RALDTMNFEVIRGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNIL 126
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--N 201
SCKV D++G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F R+ER +
Sbjct: 127 SCKVVCDNHG-SRGFGFVHFETHEAAQQAIVTMNGMLLNDRKVFVGHFKSRREREAELGA 185
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
+ +FTN+YV NL V ++ L+ +F FG + S VM+D G SR FGFVNF+ + A
Sbjct: 186 RAMEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQ 245
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV +NG ++ YVGRAQKR ER+ +L+ +FEQ + R + +G NLY+KNLDDSI
Sbjct: 246 KAVTDMNGKEVRGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSI 305
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DEKL+ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG+++G KPLY
Sbjct: 306 DDEKLRREFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLY 364
Query: 382 VAVAQRKEERKARLQAQFAQ----IRAPGG------MSPLASGIPGYHHGAPRLGPQQLY 431
VA+AQRKEERKA L Q+ Q +RA GG P + +P P+ Q Y
Sbjct: 365 VALAQRKEERKAILTNQYMQRLSTVRALGGPLLGSFQQPASYFLP----AVPQPPAQTAY 420
Query: 432 YGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQM 491
Y +P M P A + Q P + I P + R+ P Q +GVR++
Sbjct: 421 YASSSP--MQP-APRWTAQPPRPSSTYPPAASMIRPPAMLRRP-PAQVSGVRQASTQVPP 476
Query: 492 QQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVS----GMPATPVETPRPVPVPIS 547
P R +N G + + G ++ + + G+ V P P
Sbjct: 477 TVPHTQRVANIGTQTTGASGAGYPAPSGPLLTHKYSSATYNHGVQEPAVRIPGQEP---- 532
Query: 548 TLTSALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEAL 606
LT+++ +A+P ++ +M+GE+LYPL+ + A K+TGMLLE+D +E+L ++ESPE+L
Sbjct: 533 -LTASMLAAAPLHEQKQMIGERLYPLIYDAHTQLAGKITGMLLEIDNSELLLMLESPESL 591
Query: 607 KTKVAEAMAVLQ--EAAARSDVN 627
KV EA+AVLQ +AA + VN
Sbjct: 592 NAKVEEALAVLQAHQAAELTKVN 614
>gi|194044632|ref|XP_001927442.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Sus scrofa]
Length = 610
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 279/621 (44%), Positives = 374/621 (60%), Gaps = 36/621 (5%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
GY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 7 GYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAE 66
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A + +NF I G+PIRIM+S RDP +RKSG GNVFIKNL+ SIDNKAL DTF+ FG +L
Sbjct: 67 RALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNVFIKNLEDSIDNKALYDTFSTFGNIL 126
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--N 201
SCKV D +G S+G+GFV FE EAAQNAI+ +NGML+ND++V+VG F R+ER +
Sbjct: 127 SCKVVCDDHG-SRGFGFVHFETHEAAQNAIRTMNGMLLNDRKVFVGHFKSRREREAELGA 185
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
+ +FTN+YV NL V + L+ +F FG I S VM+D G SR FGFVNF+ + A
Sbjct: 186 RALEFTNIYVKNLHVDVDERCLQDLFSQFGKILSVKVMRDDSGHSRGFGFVNFEKHEDAQ 245
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV +NG + ++ YVGRAQKR ER+ +L+ +FEQ + R + +G NLY+KNLDDSI
Sbjct: 246 KAVTDMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSI 305
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DEKL++ F+ +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG+++G KPLY
Sbjct: 306 DDEKLRKEFAPYGMITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLY 364
Query: 382 VAVAQRKEERKARLQAQFAQ----IRAPGGMSPLASGIPG----YHHGAPRLGPQQLYYG 433
VA+AQRKEERKA L Q+ Q +RA G SPL + + P+ Q YY
Sbjct: 365 VALAQRKEERKAILTNQYIQRLSTMRALG--SPLLGSLQQPTSYFLPAVPQPPAQSPYYA 422
Query: 434 QGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQ 493
G P PP+ RP + + P + R+ P R + H +
Sbjct: 423 SGPPVQPPPRWTAQ--------PPRPSCASVVRPAAVSRR--PSVPISSSRQVSIHVPRP 472
Query: 494 -PQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPR------PVPVPI 546
PQ QG+ + G + P + +PR VP
Sbjct: 473 VPQ-----TQGVANIGTQTTGPGVMGCATPSGPLLTHKCCSATHNSPRVQEPGVRVPRQE 527
Query: 547 STLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEAL 606
S LA+A ++ +M+GE+LYPL+ N+ A K+TGMLLE+D +E+L ++ESPE+L
Sbjct: 528 PLTASVLAAAPLHEQKQMIGERLYPLIYNMHTQLAGKITGMLLEIDNSELLLMLESPESL 587
Query: 607 KTKVAEAMAVLQEAAARSDVN 627
KV EA+AVLQ A V+
Sbjct: 588 SAKVEEALAVLQAHQAMERVH 608
>gi|13540314|gb|AAK29408.1|AF338225_1 embryonic poly(A) binding protein [Xenopus laevis]
Length = 629
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 287/637 (45%), Positives = 387/637 (60%), Gaps = 51/637 (8%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A +GY SLY+GDL +V E+ LY+ FS ++S+RVCRD + R SL YAY+N+ P
Sbjct: 3 ATGAGYPLASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I G+PIRIM+S RDP +RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D +G S+GYGFV FE EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDEHG-SRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRREREL 181
Query: 200 QNVSP--KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E + D+ L++IF FG S VM D G+SR FGFVN+ +
Sbjct: 182 EYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AV ++NG N ++ YVGRAQKR ER+++L+ KFE QERI+RY+ G NLY+
Sbjct: 242 EEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQ---GVNLYV 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD I+D++L++ F +GTITS KVM + G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDGIDDDRLRKEFLPYGTITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ----IRA-PGGMSPLASGIPGYHHGAPRLGPQQ 429
+ KPLYVA+AQRKEERKA L Q+ Q +RA PG + Y A P +
Sbjct: 358 VSTKPLYVALAQRKEERKAILTNQYMQRLATMRAMPGPLLGSFQQPANYFLSAMPQPPNR 417
Query: 430 LYYGQG--TPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGN 487
+Y P PQ A + RP P Y P L R V P R S N
Sbjct: 418 TFYSPNPVAPVRPAPQWASHQS--------RP--PQYQPPTPLMRAVQPR-----RMSSN 462
Query: 488 THQMQQP--QFMRNSNQGIRYLD------NARNGTDQSVVSMVP----------VPFEVS 529
M+Q Q R + R + AR + S++ +P V VS
Sbjct: 463 ISTMKQASTQVPRVAQHSQRVANIGTQTAGARAQVNPSMMRTMPHYKYSCGVRNVQPIVS 522
Query: 530 GMPATPVETPRPVPVPISTLTSALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGML 588
V P + LT++L + +P ++ +MLGE++YP++ + P A K+TGML
Sbjct: 523 STHLQQVMEPAVLMQGQEPLTASLLAGAPLQEQKQMLGERIYPVIHEMHPTLAGKITGML 582
Query: 589 LEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSD 625
LE+D +E+LH++ESPE+L +KV EA+AVLQ A+ +
Sbjct: 583 LEIDNSELLHMLESPESLHSKVEEAVAVLQAHQAKEN 619
>gi|332030568|gb|EGI70256.1| Polyadenylate-binding protein 1 [Acromyrmex echinatior]
Length = 678
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 294/692 (42%), Positives = 390/692 (56%), Gaps = 110/692 (15%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQD--- 81
Y SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P D
Sbjct: 8 YPMASLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADVVV 67
Query: 82 ----------------------------------------AANAKEALNFMPINGKPIRI 101
A A + +NF I G+PIRI
Sbjct: 68 NVVTQRGFTRMAACVPHTCLANVPTIVPTMLDPRPHSTVNAERALDTMNFDMIKGRPIRI 127
Query: 102 MYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFV 161
M+S RDPS+RKSG GNVFIKNLD +IDNKA+ DTF+AFG +LSCKVA D +G SKGYGFV
Sbjct: 128 MWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGASKGYGFV 187
Query: 162 QFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVT 219
FE EEAA +I +NGML+N K+VYVG F+ R+ER ++ + FTNVYV N E +T
Sbjct: 188 HFETEEAANKSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFGEDMT 247
Query: 220 DEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGT-TNNDKVWY 278
++ LK +F +GTITS VM DGKSR FGFV F+ PDAA AV +LNG K Y
Sbjct: 248 EDKLKDMFEKYGTITSHKVMSKDDGKSRGFGFVAFEDPDAAEQAVLELNGKEIAEGKCMY 307
Query: 279 VGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITS 338
VGRAQK+AER+ +L+ KFEQ +I R + +G NLY+KNLDD+I+DE+L++ F+ FGTITS
Sbjct: 308 VGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYVKNLDDTIDDERLRKEFTPFGTITS 367
Query: 339 CKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQ 398
KVM+++ G SKG GF FS PEEAT+A+ EMNG+++G KPLYVA+AQRKE+RKA L +Q
Sbjct: 368 AKVMMEE-GRSKGFGFVCFSQPEEATKAVTEMNGRIVGSKPLYVALAQRKEDRKAHLASQ 426
Query: 399 FAQIRAPGGMSPLASGIPGYHHGA---PRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFP 455
+ Q A M + + G+ P L Q +YG P Q A Q + P
Sbjct: 427 YMQRMANVRMQQMGQIFQPSNAGSYFVPTLPQPQRFYG-------PAQMA----QIRATP 475
Query: 456 GLRPGGPNYIMP----------------------------YHLQRQVHPGQRTGVRRSGN 487
P PN + P L+ + TG + G
Sbjct: 476 RW-PAQPNQVRPNTQTGTSGFASMQAAPFRAAPRAPAAQAGALRNSMSARPITGQQAVGG 534
Query: 488 THQMQQ----------PQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVE 537
+ + P R SN +Y N RN ++ +P P S A ++
Sbjct: 535 ANMQSRTMAGPAVGVSPGQSRPSN--YKYTANMRNPPQTAMA--IPAPSGPSVQQAVHIQ 590
Query: 538 TPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVL 597
P+ S LA+A P ++ +MLGE+L+PL++ + P K+TGMLLE+D +E+L
Sbjct: 591 GQEPL------TASMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSELL 644
Query: 598 HLIESPEALKTKVAEAMAVLQEAAARSDVNEK 629
H++E E+LK KV EA+AVLQ A+ V K
Sbjct: 645 HMLEHSESLKAKVEEAVAVLQAHQAKQAVAPK 676
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 170/296 (57%), Gaps = 25/296 (8%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GNV ++ +L++N++ +YD FS ++S +V +D+S +S GY +V++ + A
Sbjct: 139 SGVGNV--FIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESG-ASKGYGFVHFETEEAA 195
Query: 83 ANAKEALNFMPINGKPIRI-MYSHRDPSIRKSG-----YGNVFIKNLDTSIDNKALCDTF 136
+ + +N M +NGK + + + R ++ G + NV++KN + L D F
Sbjct: 196 NKSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFGEDMTEDKLKDMF 255
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND-KQVYVGLFVRRQ 195
+GT+ S KV +G+S+G+GFV FE+ +AA+ A+ LNG I + K +YVG ++
Sbjct: 256 EKYGTITSHKVMSKDDGKSRGFGFVAFEDPDAAEQAVLELNGKEIAEGKCMYVGRAQKKA 315
Query: 196 ERAQQNVSPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
ER QQ + KF N+YV NL +T+ DE L+K F FGTITSA VM +
Sbjct: 316 ER-QQELKRKFEQLKIERLNRYQGVNLYVKNLDDTIDDERLRKEFTPFGTITSAKVMME- 373
Query: 243 DGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+G+S+ FGFV F P+ A AV ++NG K YV AQ++ +R+A L +++ Q
Sbjct: 374 EGRSKGFGFVCFSQPEEATKAVTEMNGRIVGSKPLYVALAQRKEDRKAHLASQYMQ 429
>gi|336364894|gb|EGN93247.1| hypothetical protein SERLA73DRAFT_172163 [Serpula lacrymans var.
lacrymans S7.3]
Length = 684
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 287/643 (44%), Positives = 384/643 (59%), Gaps = 67/643 (10%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
LYVG+L+ V E+ L+++F+ + V S+RVCRD R SLGYAYVNY N D A E L
Sbjct: 46 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTSDGERALEQL 105
Query: 90 NFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAI 149
N+ I + RIM+S RDP++RK+G GN+FIKNLD IDNKAL DTFAAFG VLSCKVA
Sbjct: 106 NYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVAT 165
Query: 150 DSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFT 207
D +G+SKGYGFV +E EAA+ AIK +NGML+NDK+VYVG + R+ER + + +FT
Sbjct: 166 DEHGRSKGYGFVHYETGEAAETAIKAVNGMLLNDKKVYVGYHISRKERQSKLDEMKAQFT 225
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
N+Y+ NL +VT ++ +++F +G +TSAIV D +G S+ FGFVN++ + A +AV+ L
Sbjct: 226 NLYIKNLDTSVTQDEFEEMFQKYGNVTSAIVQVDEEGNSKGFGFVNYEHHEEAQSAVDAL 285
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
+ T K +V RAQK+AERE +LR +EQ ++ + K +G NLY+KNL+D ++DEKL+
Sbjct: 286 HDTDIRGKKLFVSRAQKKAEREEELRRSYEQAKMEKLSKYQGVNLYIKNLEDDVDDEKLR 345
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
F FGTITSCKVM D SKG GF FS P+EAT+A+ EMN KMIG KPLYV++AQR
Sbjct: 346 AEFEPFGTITSCKVMRDDKSTSKGFGFVCFSSPDEATKAVAEMNNKMIGSKPLYVSLAQR 405
Query: 388 KEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQA--- 444
+E R+ +L++Q AQ A+GIPG + P +YY G PG PPQ
Sbjct: 406 REVRRQQLESQIAQRNQIRMQQAAAAGIPGGYINGP------MYYPPG-PGSFPPQGRNM 458
Query: 445 AGYGFQQQVFP---------GLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQ 495
GYG Q + P G PGG I PY Q + G G R G +P
Sbjct: 459 MGYG-QPGMLPPRPRYPAGNGQVPGG-MPIPPYGQPPQSY-GGMPGYPRGG----APRPP 511
Query: 496 FMR-------NSNQGIRYLDN--------ARNGTDQSVVSMV--------------PVPF 526
R N N I + AR G Q V P +
Sbjct: 512 VARGPGSSPTNPNAPIPRANAPPSVNGAAARGGAPQGSVPPNRPPPAGAPAPGNRPPQGY 571
Query: 527 EVSGMP----ATPVETPRPVPVP-----ISTLTS-ALASASPDDRTRMLGEQLYPLVENI 576
+++ A PV P P + TLT+ ALA+ASP ++ +MLGE +Y +
Sbjct: 572 KLNPQTRNAGAPPVGQTSPAQAPATQSEVPTLTAGALANASPMEQKQMLGEVIYMKIAPA 631
Query: 577 EPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
+P A K+TGMLLEMD E+LHL+ESP+++ KV EA+AVL +
Sbjct: 632 QPELAGKITGMLLEMDNAELLHLLESPDSMAGKVNEALAVLHD 674
>gi|196008415|ref|XP_002114073.1| hypothetical protein TRIADDRAFT_27786 [Trichoplax adhaerens]
gi|190583092|gb|EDV23163.1| hypothetical protein TRIADDRAFT_27786 [Trichoplax adhaerens]
Length = 622
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 275/611 (45%), Positives = 378/611 (61%), Gaps = 22/611 (3%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
LYVGDL +VNE+QLY+ F+ + S+RVCRD R SLGYAYVN+ P DA A + L
Sbjct: 21 LYVGDLAPDVNEAQLYEKFNSTGPISSIRVCRDAITRRSLGYAYVNFQQPNDAERALDTL 80
Query: 90 NFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAI 149
NF P+NGKP RIM+S RDPS+R+SG GN+FIKNL+ IDNKA+ DTF+AFG +LSCK+A+
Sbjct: 81 NFDPVNGKPCRIMWSQRDPSLRRSGVGNIFIKNLEKDIDNKAIYDTFSAFGNILSCKIAL 140
Query: 150 DSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFT 207
D NG SKGY FV FE +EAA AI+ +NGML++ K+V+VG F+ R+ER ++ N++ K+T
Sbjct: 141 DENGNSKGYAFVHFETQEAANRAIEKVNGMLLSGKKVFVGHFMSRKERMEKIGNLAAKYT 200
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
N+YV N + ++D++ + +F G I S +VM+D GKSR FGFV++++ +AA AVE L
Sbjct: 201 NLYVKNFRDDISDDEFRDLFEQCGKIVSCVVMRDDSGKSRGFGFVSYETHEAAQKAVETL 260
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
N + + YV RAQK++ER A LR ++EQ++ ++ +G NLY+KNLDD I+D KL+
Sbjct: 261 NEKEFDLRRMYVARAQKKSERSALLRRQYEQKKQEMMKRFQGVNLYVKNLDDVIDDAKLR 320
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
+ F+ FGTITS KVM D+ G S+G GF FS PEEAT+A+ EMNG++I KPLYVA+AQR
Sbjct: 321 QEFANFGTITSAKVMSDEKGISRGFGFVCFSSPEEATKAVTEMNGRIIISKPLYVALAQR 380
Query: 388 KEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGY 447
KE+RKA+L AQ+ Q MS L PG G ++ Q YY G Q Y
Sbjct: 381 KEDRKAQLAAQYVQ-----RMSTLRIPQPG-QPGVNQMFQQGGYYMPGMHQGQQQQQRFY 434
Query: 448 GFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYL 507
QQ P RP N M + G G + G M+ R+ Q
Sbjct: 435 ATQQ--MPA-RPRWQNQQMMRNSGGGSSYGGIGGGSQMGRGRGMRFAGVPRSQGQQNVNP 491
Query: 508 DNARNGTDQSVVSMVPV--PFEVSGMPATPVETP-------RPVPV-PISTLTSALASAS 557
+ ++VS P P++ S + P + P R P LT+ L+
Sbjct: 492 SQRSAAANAALVSNQPRHPPYKHSNVRNIPPQAPSQANHQTRAQPAQDADNLTTHLSQVD 551
Query: 558 PDDRTRMLGEQLYPLVENI-EPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAV 616
+ ++LGE+LYP VE I A K+TGMLLE++ EVLH++ES EAL +KV EA+ V
Sbjct: 552 EPQQKQILGEKLYPRVEAICGSEKAGKITGMLLEIENAEVLHMLESKEALDSKVQEAIDV 611
Query: 617 LQEAAARSDVN 627
L + + + N
Sbjct: 612 LDKHSKTQESN 622
>gi|242025596|ref|XP_002433210.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
gi|212518751|gb|EEB20472.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
Length = 637
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 282/641 (43%), Positives = 383/641 (59%), Gaps = 69/641 (10%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ L++ FS V+S+RVCRD + SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHSDVTEAMLFEKFSSAGPVLSIRVCRDMITKRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +N+ P+ GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKA+ DTF+ FG +LS
Sbjct: 68 ALDTMNYDPLKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSTFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKVA D +G SKGYGFV FE EEAA +I +NGML+N K+V+VG F+ R+ER ++
Sbjct: 128 CKVAQDESGTSKGYGFVHFETEEAANKSIDKVNGMLLNGKRVFVGKFIPRKEREKELGEK 187
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVYV N E +D+ L+++F +G ITS VM DGKS+ FGFV F+ P+AA
Sbjct: 188 AKRFTNVYVKNFGEDFSDDLLREMFEKYGRITSHKVMSKDDGKSKGFGFVAFEDPEAAEK 247
Query: 263 AVEKLNGT-TNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV LNG K +VGRAQK+AER+ +L+ KFEQ ++ R + +G NLY+KN+DD+I
Sbjct: 248 AVASLNGKEIVEGKPLFVGRAQKKAERQQELKRKFEQLKMERLSRYQGVNLYVKNIDDNI 307
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DE+L++ F+ FGTITS KVM++ G SKG GF FS EEAT+A+ EMNG+++G KPLY
Sbjct: 308 DDERLRKEFTPFGTITSAKVMLED-GRSKGFGFVCFSSAEEATKAVTEMNGRIVGSKPLY 366
Query: 382 VAVAQRKEERKARLQAQFAQ----IRAPGGMSPLASGIPGYHHGAPRLGPQQLYYG---- 433
VA+AQRKE+RKA L +Q+ Q IR P+ G + P Q ++G
Sbjct: 367 VALAQRKEDRKAHLASQYMQKMANIRMQQIGQPVFQPSSGGYFVPTIPQPPQRFFGPAQM 426
Query: 434 --------------QGTPGLMPPQAA---------GYGFQQQVFPGLRP--------GGP 462
Q PG PQ A Q P LR GGP
Sbjct: 427 AQIRTATTRWPTQPQSRPGTQQPQTAYPAIPGPFRPGPRPQAAQPALRSISARPITGGGP 486
Query: 463 NYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMV 522
+Q Q+ P R + + + + Q+P +Y N RN ++
Sbjct: 487 -------MQTQIPP--RAPMPPTVSVNAAQRP-------TNYKYTANMRNPPQ----TLG 526
Query: 523 PVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHAS 582
V + A V+ P+ T+ LA A ++ +MLGE+L+PL+ + A
Sbjct: 527 HVAHQPQVQQAVHVQGQEPL------TTTMLADAPLQEQKQMLGERLFPLISAMYSKLAG 580
Query: 583 KVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAAR 623
K+TGMLLE+D +E+LH++E E+LK+KV EA+AVLQ A+
Sbjct: 581 KITGMLLEIDNSELLHMLEHRESLKSKVEEAVAVLQAHEAK 621
>gi|402225283|gb|EJU05344.1| polyadenylate binding protein [Dacryopinax sp. DJM-731 SS1]
Length = 716
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 288/653 (44%), Positives = 388/653 (59%), Gaps = 83/653 (12%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
VSLYVG+L+ V E+ L+++F+ + V SVRVCRD R SLGYAYVNY N D A +
Sbjct: 74 VSLYVGELDPQVTEAMLFEIFNMIGPVASVRVCRDAVTRRSLGYAYVNYLNYNDGERALD 133
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LN+ I GKP RIM+S RDP +RK+G GN+FIKNLD IDNKAL DTFAAFGTVLSCKV
Sbjct: 134 QLNYSQIRGKPCRIMWSQRDPGLRKTGQGNIFIKNLDQGIDNKALHDTFAAFGTVLSCKV 193
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPK 205
A D +G SKGYGFV +++ EAA+ AIK +NGML+NDK+V+VG + R+ER + +
Sbjct: 194 ATDDSGLSKGYGFVHYDSNEAAEAAIKAVNGMLLNDKKVFVGQHISRKERQSKIDEMKSH 253
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
FTN+YV NL V +E+ + +F FG ITSA++ KD +G S+ FGFVNF++ + A AVE
Sbjct: 254 FTNLYVKNLDTEVGEEEFEGLFSQFGPITSAVIQKDEEGNSKGFGFVNFENHEDAQRAVE 313
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
+L+ + K +VGRAQK++ERE +LR ++EQ + + K +G+NLY+KNL+D ++DEK
Sbjct: 314 ELDNKEIHGKPVFVGRAQKKSEREEELRKQYEQAKYEKAGKYQGSNLYIKNLEDDVDDEK 373
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L+ F FGTITSCKVM D+ G SKG GF FS P+EATRA++EMN K++G KPLYVA+A
Sbjct: 374 LRAEFEPFGTITSCKVMRDEKGTSKGFGFVCFSSPDEATRAMSEMNNKIVGTKPLYVALA 433
Query: 386 QRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAA 445
QRK+ RK +L++Q AQ ++ A GIP +GA P P AA
Sbjct: 434 QRKDVRKQQLESQIAQRNNQLRLA-AAQGIPNMPYGA-------------APMFYQPAAA 479
Query: 446 GYGFQQQVFPGLRP--GGPNYIMPYHLQRQVHPGQRTG-----------VRRSGNTHQMQ 492
GY PG RP G P P + + PGQ+ G Q
Sbjct: 480 GYP------PGQRPVMGYPPAPGPARM--RYAPGQQMAGMAVPPPYGQPPVPYGMGTPYQ 531
Query: 493 QPQFMRNSNQGIRY-------LDNARNGTDQSVVS---MVPVPFEVSGMPAT------PV 536
+P+ +R L +A G VV+ +P G P T P
Sbjct: 532 RPRPVRQPGGPGGPGAPAPVPLSSAPRGPSAPVVTGGNGTRLPMAGPGGPVTGAGAGRPA 591
Query: 537 ETPRPVP--------------------------VPIST----LTSALASASPDDRTRMLG 566
TP VP P+ST + LA+AS ++ ++LG
Sbjct: 592 PTPNGVPQNGGQAQAYKLNPNTRNATTTGQATTGPVSTEPPINAALLANASAGEQKQILG 651
Query: 567 EQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
E +Y + ++P A K+TGMLLEM+ TE++HLIE+P+AL+ KVAEA+ VL+E
Sbjct: 652 EAIYMKIHAMQPELAGKITGMLLEMETTELIHLIETPDALQNKVAEAITVLEE 704
>gi|148227710|ref|NP_001085351.1| embryonic polyadenylate-binding protein B [Xenopus laevis]
gi|82236619|sp|Q6GR16.1|EPABB_XENLA RecName: Full=Embryonic polyadenylate-binding protein B;
Short=Embryonic poly(A)-binding protein B; Short=ePAB-B;
Short=ePABP-B; AltName: Full=XePABP-B
gi|49257242|gb|AAH71118.1| MGC81363 protein [Xenopus laevis]
Length = 629
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 287/640 (44%), Positives = 385/640 (60%), Gaps = 71/640 (11%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLY+GDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 8 YPLASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+PIRIM+S RDP +RKSG GNVFIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKV D G S+GYGFV FE +EAA AI+ +NGML+ND++V+VG F R+ER + +
Sbjct: 128 CKVVCDEYG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAK 186
Query: 205 --KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+FTNVY+ N E + D+ LK+IF FG S VM D+ G+SR FGFVN+ + + A
Sbjct: 187 VMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSGRSRGFGFVNYGNHEEAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDD 319
AV ++NG N ++ YVGRAQKR ER+ +L+ KFE QERI+RY+ G NLY+KNLDD
Sbjct: 247 AVTEMNGKEVNGRMVYVGRAQKRIERQGELKRKFEQIKQERINRYQ---GVNLYVKNLDD 303
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
I+D++L++ FS +GTITS KVM + G SKG GF FS PEEAT+A+ EMNG+++ KP
Sbjct: 304 GIDDDRLRKEFSPYGTITSTKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKP 362
Query: 380 LYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGL 439
LYVA+AQRKEERKA L Q+ Q A +PG P LG Q P +
Sbjct: 363 LYVALAQRKEERKAILTNQYMQRLA------TMRAMPG-----PLLGSFQQPANYFLPTM 411
Query: 440 MPPQAAGYGFQQQVFPGLRPG---------GPNYIMPYHLQRQVHPGQRTGVRRSGNTHQ 490
P + V P +RP P Y P L R V P R N
Sbjct: 412 PQPSNRAFYSPNPVAP-VRPAPQWASHQSRPPQYQPPAPLMRAVPPR-----RMHSNIST 465
Query: 491 MQQP---------QFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGM---------- 531
M+Q Q R +N G + AR + S++ +P G+
Sbjct: 466 MKQASTQVPRVPLQSQRVANIGTQ-TAGARAQVNASIMRAMPHYKYSCGVRNVQPIGSSA 524
Query: 532 -------PATPVETPRPVPVPISTLTSALASASP-DDRTRMLGEQLYPLVENIEPVHASK 583
PA ++ P LT++L +A+P ++ ++LGE++YPL+ + P A K
Sbjct: 525 HLQQVLEPAVLMQGQEP-------LTASLLAAAPLQEQKQILGERIYPLIHEMHPTLAGK 577
Query: 584 VTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAAR 623
+TGMLLE+D +E+LH++ESPE+L +KV EA+AVLQ A+
Sbjct: 578 ITGMLLEIDNSELLHMLESPESLHSKVEEAVAVLQAHQAK 617
>gi|17136378|ref|NP_476667.1| polyA-binding protein, isoform A [Drosophila melanogaster]
gi|24654793|ref|NP_725749.1| polyA-binding protein, isoform B [Drosophila melanogaster]
gi|24654797|ref|NP_725750.1| polyA-binding protein, isoform C [Drosophila melanogaster]
gi|195335482|ref|XP_002034394.1| GM21847 [Drosophila sechellia]
gi|76803808|sp|P21187.3|PABP_DROME RecName: Full=Polyadenylate-binding protein; Short=PABP;
Short=Poly(A)-binding protein
gi|7302665|gb|AAF57745.1| polyA-binding protein, isoform B [Drosophila melanogaster]
gi|7302666|gb|AAF57746.1| polyA-binding protein, isoform C [Drosophila melanogaster]
gi|21428474|gb|AAM49897.1| LD24412p [Drosophila melanogaster]
gi|21626472|gb|AAM68175.1| polyA-binding protein, isoform A [Drosophila melanogaster]
gi|194126364|gb|EDW48407.1| GM21847 [Drosophila sechellia]
gi|220946756|gb|ACL85921.1| pAbp-PA [synthetic construct]
Length = 634
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 283/647 (43%), Positives = 369/647 (57%), Gaps = 81/647 (12%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL Q+VNES L+D FS V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF + KPIRIM+S RDPS+R+SG GNVFIKNLD +IDNKA+ DTF+AFG +LSCKVA
Sbjct: 63 MNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D G SKGYGFV FE EEAA +I +NGML+N K+VYVG F+ R+ER ++ + F
Sbjct: 123 TDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV N E DE LK+ F +G ITS VM DGKS+ FGFV F++ +AA AAV+
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQA 242
Query: 267 LNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LNG + K YV RAQK+AER+ +L+ KFE+ + R+E + G NLY+KNLDD+I+D++
Sbjct: 243 LNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDR 302
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L+ FS +G ITS KVM D+ G SKG GF F+ EAT A+ E+NG+++G KPLYVA+A
Sbjct: 303 LRIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALA 362
Query: 386 QRKEERKARLQA------------QFAQIRAPGGMSPL------------ASGIPGYHHG 421
QRKEERKA L + Q QI P S S +
Sbjct: 363 QRKEERKAHLASQYMRHMTGMRMQQLGQIYQPNAASGFFVPTLPSNQRFFGSQVATQMRN 422
Query: 422 APRLGPQ-----------------------------QLYYGQGTPGLMPPQAAGYGFQQQ 452
PR PQ Q PQ G
Sbjct: 423 TPRWVPQVRPPAAIQGVQAGAAAAGGFQGTAGAVPTQFRSAAAGARGAQPQVQGTHAAAA 482
Query: 453 VFPGLRPGGPNYIMPYHLQRQVHPG-QRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNAR 511
+R G I Q+ P Q G + +G Q R SN +Y N R
Sbjct: 483 AANNMRNTGARAITG---QQTAAPNMQIPGAQIAGGAQQ-------RTSN--YKYTSNMR 530
Query: 512 NGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYP 571
N + P+P ++ G + + + S LA+A P ++ ++LGE+LYP
Sbjct: 531 NPPVPQLHQTQPIPQQLQGKNSEKL------------IASLLANAKPQEQKQILGERLYP 578
Query: 572 LVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
++E++ A K+TGMLLE++ +E+LH+IE EALK KV EA+AVLQ
Sbjct: 579 MIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQ 625
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEEATRALN 368
A+LY+ +L +N+ L + FS G + S +V D S G + F P +A RAL+
Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 369 EMNGKMIGRKPLYVAVAQR 387
MN ++ KP+ + +QR
Sbjct: 62 TMNFDLVRNKPIRIMWSQR 80
>gi|193650237|ref|XP_001943392.1| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 650
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 284/655 (43%), Positives = 397/655 (60%), Gaps = 67/655 (10%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V E+ L++ FS V ++S+RVCR RSSLGYAYVN+ N DA A +
Sbjct: 3 SLYVGDLHSDVTEAMLFEKFSTVGAILSIRVCRHVITRSSLGYAYVNFQNIADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF + G P+RIM+S RDPS+RKSG GNVFIKNLD SIDNKA+ DTF+AFG +LSCKVA
Sbjct: 63 MNFDILKGHPMRIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D G SKGYGFV FE +++A +I+ +NGML+N K+V+VG FV R +R ++ + +
Sbjct: 123 QDETGNSKGYGFVHFETKQSATQSIEKVNGMLLNGKKVFVGRFVGRNDREKELGQRAKLY 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVY+ N+ E V +++L ++F +GTITS VM DG SR FGFV F+ P A AV +
Sbjct: 183 TNVYIKNIDENVNEKELFEMFKKYGTITSCKVMFKDDGSSRGFGFVAFEDPKEAEKAVTE 242
Query: 267 LNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
L+G + + K +YV RAQK+ ER+ +L+ KFEQ +I R + +G NLY+KNLDD+I+DE+
Sbjct: 243 LHGKKSPEGKTYYVNRAQKKTERQQELKRKFEQYKIERINRYQGVNLYVKNLDDTIDDER 302
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L+ FS FGTI S KVM+D G SKG GF FS PEEAT+A+ +MNG+++G KPLYV +A
Sbjct: 303 LRREFSAFGTIKSAKVMMDD-GRSKGFGFVYFSSPEEATKAVTDMNGRIVGTKPLYVTLA 361
Query: 386 QRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGA------PRLGPQQLYYG--QGTP 437
QRK++RKA L +Q++Q M + P Y GA P + Q +YG Q T
Sbjct: 362 QRKKDRKAHLDSQYSQRNTNMRMQSIG---PIYQPGASNGYFVPTIPQPQYFYGPTQMTQ 418
Query: 438 GLMPPQAAGYGFQQQVFPGL----RPGGPNYIMPYH---LQRQVHPGQRTGVRRSG---- 486
P+ + FQ QV G PG PN + + V GQ+ + R+
Sbjct: 419 IRSQPR---WAFQSQVRAGTPQTAAPGYPNMATQHQNIGARAPVPAGQQAALARNVMVDT 475
Query: 487 -----NTHQMQQPQFM----------RNSNQGIRYLDNARN--GTDQSVVSMVP------ 523
+T Q + P + R++ G +Y N RN DQ + P
Sbjct: 476 NARPISTAQQKMPGAVSAGSVHVPGARDTGSGYKYTPNMRNPLSQDQGIGQAQPGQAQGM 535
Query: 524 ---VPFEVSGM------PATPVETPRPVPVPIST-----LTSA-LASASPDDRTRMLGEQ 568
P + GM A +E +P + LT+ LA+A P+D+ +MLGE+
Sbjct: 536 GQSQPGQAQGMGQAQSGQAQGMEQVQPDKAAVHVYGQEPLTATMLATAKPEDQKQMLGER 595
Query: 569 LYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAAR 623
L+PL+E + P K+TGMLLE+D +++LH++E E+LK +V +A+A+LQ A+
Sbjct: 596 LFPLIERMYPELTGKITGMLLEIDNSDLLHMLEHHESLKNQVEKAVAMLQAHQAQ 650
>gi|344279674|ref|XP_003411612.1| PREDICTED: polyadenylate-binding protein 1 [Loxodonta africana]
Length = 612
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 273/610 (44%), Positives = 378/610 (61%), Gaps = 32/610 (5%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
GY SLYVGDL +V E+ LY+ F ++S+RVCRD + R SL YAY+N+ P DA
Sbjct: 7 GYPLASLYVGDLHADVTEAMLYEKFLPAGPILSIRVCRDVATRRSLRYAYINFQQPADAE 66
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A + +NF I G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +L
Sbjct: 67 RALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNIL 126
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--N 201
SCKV D +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F R+ER +
Sbjct: 127 SCKVVCDEHG-SRGFGFVHFETHEAAQQAISTMNGMLLNDRKVFVGHFKSRREREAELRA 185
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
+ +FTN+YV NL + ++ L+ +F FG + S VMKD++G SR FGFVNF+ + A
Sbjct: 186 RAMEFTNIYVKNLQVDMDEQGLQDLFSQFGKLLSVKVMKDNNGHSRGFGFVNFEKHEEAQ 245
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV +NG + + YVGRAQKR ER+ +L+ KFEQ + R + +G NLY+KNLDDSI
Sbjct: 246 KAVMDMNGKEVSGRQLYVGRAQKRVERQNELKRKFEQMKQDRLNRYQGVNLYVKNLDDSI 305
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DEKL++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG++IG KPLY
Sbjct: 306 DDEKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIIGTKPLY 364
Query: 382 VAVAQRKEERKARLQAQFAQ----IRAPG------GMSPLASGIPGYHHGAPRLGPQQLY 431
VA+AQRKEER+A L Q+ Q +RA G P + +P P+ + Y
Sbjct: 365 VALAQRKEERRAILSNQYMQRLSTMRALGVPLLGSSQQPTSYFLPAM----PQPPARAAY 420
Query: 432 YGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQM 491
YG G+ + P A + Q RP + + P R+ Q + VR++
Sbjct: 421 YGSGSVATIQP-APRWAAQPP-----RPSCASMVRPPATPRRPL-AQLSTVRQASTQVPH 473
Query: 492 QQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPAT---PVETPRPVPVPIST 548
P R +N G + G + + +P+ S +E+P P++
Sbjct: 474 PVPHTQRVANIGTQ--TTGPGGAEGCTSGQLLLPYRHSSAAHNVHRVLESPMHRQEPLT- 530
Query: 549 LTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
S LA+A P ++ +M+GE+LYPL+ + P A K+TGMLLE+D +E+L ++ESPE+L+
Sbjct: 531 -ASMLAAALPHEQKQMIGERLYPLIYGVYPHLAGKITGMLLEIDNSELLLMLESPESLQA 589
Query: 609 KVAEAMAVLQ 618
K+ EA+AVLQ
Sbjct: 590 KIEEAVAVLQ 599
>gi|410899897|ref|XP_003963433.1| PREDICTED: embryonic polyadenylate-binding protein-like [Takifugu
rubripes]
Length = 606
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 282/622 (45%), Positives = 380/622 (61%), Gaps = 61/622 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY FS ++S+RVCRD R SLGYAY+N+ P DA
Sbjct: 8 YPLASLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINFQQPADAEC 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +N+ I G+PIRIM+S RDP +RKSG GN+FIKN+D SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNYDVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D G SKGYGFV FE EEAA AI+ +NGML+ND++V+VG F R+ER ++ +
Sbjct: 128 CKVVCDERG-SKGYGFVHFETEEAANRAIETMNGMLLNDRKVFVGHFKSRKEREEELGSK 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ KFTN+Y+ N E DE LK++F FG S VMKD G+SR FGFVNF + A
Sbjct: 187 ALKFTNIYIKNFGEDYNDEKLKEVFAAFGRTLSVRVMKDERGRSRGFGFVNFAHHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDD 319
AV+++NG N KV YVGRAQKR ER+ +L+ KFE Q+RI RY+ G NLY+KNLDD
Sbjct: 247 AVDEMNGKELNGKVIYVGRAQKRLERQGELKRKFELIKQDRIQRYQ---GVNLYVKNLDD 303
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
SI+DE+L++ F+ +GTITS KVM D S+G GF FS PEEAT+A+ EMNG+++ KP
Sbjct: 304 SIDDERLRKEFAPYGTITSAKVMTDGPQ-SRGFGFVCFSSPEEATKAVTEMNGRIVATKP 362
Query: 380 LYVAVAQRKEERKARLQAQFAQIRAP--GGMSPLASGI--PGYHHGAPRLGPQQLYYGQG 435
LYVA+AQR+EERKA L ++ Q A SP+ GY+ P+ P+ Y
Sbjct: 363 LYVALAQRREERKAILTNKYMQRLATLRTMTSPIIDSYQQAGYYMTVPQ--PRSFYSPNA 420
Query: 436 TPGLMP-PQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQP 494
+ P+ G + Q GP I+ +G RR G+T
Sbjct: 421 VSTMRALPRWTGQPHRLQ--------GPYTIV-------------SGPRR-GSTPIASVR 458
Query: 495 QFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMP-------ATPVETPRPVPVPI- 546
Q + I N Q+V +P G+P ++ V + VP P+
Sbjct: 459 QASTQAPNVISSAQKTNNIGTQTVGGRAELP----GVPRSGQYKYSSAVRNAQQVPGPVL 514
Query: 547 ---------STLTSALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEV 596
LT+++ +A+P D+ ++LGE+LYPL+ + P A K+TGMLLE+D +E+
Sbjct: 515 EPSVYIQGQEPLTASMLAAAPLMDQKQLLGERLYPLISTLHPNLAGKITGMLLEIDNSEL 574
Query: 597 LHLIESPEALKTKVAEAMAVLQ 618
LH++E+PE+L +KV EA+AVLQ
Sbjct: 575 LHMLETPESLHSKVDEAIAVLQ 596
>gi|114649018|ref|XP_001154541.1| PREDICTED: polyadenylate-binding protein 3 isoform 5 [Pan
troglodytes]
Length = 633
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 277/627 (44%), Positives = 387/627 (61%), Gaps = 27/627 (4%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R S YAYVN+ +P+DA +
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEH 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+F+KNLD SI+NKAL DT +AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPLRIMWSQRDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
C V D NG SKGYGFV FE EAA+ AI+ +NGML+N ++V+VG F R+ER +
Sbjct: 128 CNVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +F NVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDD 319
AV+++NG N K YVGRAQK+ ER+ +L+ FE Q+RI+RY+ + NLY+KNLDD
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVV---NLYVKNLDD 303
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KP
Sbjct: 304 DIDDERLQKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362
Query: 380 LYVAVAQRKEERKARLQAQFAQ----IRA-PGGMSP----LASGIPGYHHGAPRLGPQQL 430
LYVA+AQRKEER+A L ++ Q +RA P +P + +P + A P Q+
Sbjct: 363 LYVALAQRKEERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVPQTQNHAAYYPPSQI 422
Query: 431 YYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVH---PGQRTGVRRSGN 487
+ +P A + FQ + +RPG P +P+ R P + R +
Sbjct: 423 TQLRPSPRWTAQGARPHPFQNKP-SAIRPGAPR--VPFSTMRPASSQIPRVMSTQRVANT 479
Query: 488 THQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFE-VSGMPATPVETPRPVPVPI 546
+ Q P+ + R + V P + ++ P ++ P
Sbjct: 480 STQTVGPRPAAAAAAAAAATPAVRTVARYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQGQ 539
Query: 547 STLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEA 605
TLT S LASA P + +MLGE+L+PL++ + P A K+TGMLLE+D +E+L+++ESPE+
Sbjct: 540 ETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPES 599
Query: 606 LKTKVAEAMAVLQEAAARSDVNEKLGS 632
L++KV EA+AVLQ A+ + + S
Sbjct: 600 LRSKVDEAVAVLQAHQAKEATQKAVNS 626
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 173/299 (57%), Gaps = 18/299 (6%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID--SNGQSKGYGFVQFE 164
+PS ++++ +L + L + F+ G +LS +V D + G S Y +V F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRG-SSNYAYVNFQ 60
Query: 165 NEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLK 224
+ + A++A+ +N +I K + + ++ +R +++ N++V NL +++ ++ L
Sbjct: 61 HPKDAEHALDTMNFDVIKGKPLRI-MWSQRDPSLRKS---GMGNIFVKNLDKSINNKALY 116
Query: 225 KIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQK 284
FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG N + +VG+ +
Sbjct: 117 DTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKS 175
Query: 285 RAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
R EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM D
Sbjct: 176 RKEREAELGARAKE----------FPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD 225
Query: 345 QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ F Q++
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284
>gi|82802751|gb|ABB92426.1| PABP3 [Pan troglodytes]
Length = 632
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 277/627 (44%), Positives = 387/627 (61%), Gaps = 27/627 (4%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R S YAYVN+ +P+DA +
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEH 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+F+KNLD SI+NKAL DT +AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPLRIMWSQRDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
C V D NG SKGYGFV FE EAA+ AI+ +NGML+N ++V+VG F R+ER +
Sbjct: 128 CNVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +F NVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDD 319
AV+++NG N K YVGRAQK+ ER+ +L+ FE Q+RI+RY+ + NLY+KNLDD
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVV---NLYVKNLDD 303
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KP
Sbjct: 304 DIDDERLQKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362
Query: 380 LYVAVAQRKEERKARLQAQFAQ----IRA-PGGMSP----LASGIPGYHHGAPRLGPQQL 430
LYVA+AQRKEER+A L ++ Q +RA P +P + +P + A P Q+
Sbjct: 363 LYVALAQRKEERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVPQTQNHAAYYPPSQI 422
Query: 431 YYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVH---PGQRTGVRRSGN 487
+ +P A + FQ + +RPG P +P+ R P + R +
Sbjct: 423 TQLRPSPRWTAQGARPHPFQNKP-SAIRPGAPR--VPFSTMRPASSQIPRVMSTQRVANT 479
Query: 488 THQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFE-VSGMPATPVETPRPVPVPI 546
+ Q P+ + R + V P + ++ P ++ P
Sbjct: 480 STQTVGPRPAAAAAAAAAATPAVRTVARYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQGQ 539
Query: 547 STLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEA 605
TLT S LASA P + +MLGE+L+PL++ + P A K+TGMLLE+D +E+L+++ESPE+
Sbjct: 540 ETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPES 599
Query: 606 LKTKVAEAMAVLQEAAARSDVNEKLGS 632
L++KV EA+AVLQ A+ + + S
Sbjct: 600 LRSKVDEAVAVLQAHQAKEATQKAVNS 626
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 173/299 (57%), Gaps = 18/299 (6%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID--SNGQSKGYGFVQFE 164
+PS ++++ +L + L + F+ G +LS +V D + G S Y +V F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRG-SSNYAYVNFQ 60
Query: 165 NEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLK 224
+ + A++A+ +N +I K + + ++ +R +++ N++V NL +++ ++ L
Sbjct: 61 HPKDAEHALDTMNFDVIKGKPLRI-MWSQRDPSLRKS---GMGNIFVKNLDKSINNKALY 116
Query: 225 KIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQK 284
FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG N + +VG+ +
Sbjct: 117 DTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKS 175
Query: 285 RAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
R EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM D
Sbjct: 176 RKEREAELGARAKE----------FPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD 225
Query: 345 QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ F Q++
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284
>gi|355754577|gb|EHH58478.1| hypothetical protein EGM_08341 [Macaca fascicularis]
Length = 637
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 279/645 (43%), Positives = 382/645 (59%), Gaps = 59/645 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS+ ++S+RVCRD R S YAYVN+ +P+DA
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+R+SG GN+F+KNLD SI+NK L DT +AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE EAA+ AI+ +NG L+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +F NVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDARK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + + NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L Q+ Q +RA P G + +P + A
Sbjct: 366 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAVPQTQNRAAYY 423
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVH---PGQRTGV 482
P Q+ + +P A + FQ + G+RP P +P+ R P +
Sbjct: 424 PPSQIAQLRPSPCWTAQGARPHPFQNKPG-GIRPAAPR--LPFSTMRPTSSQVPRVMSTQ 480
Query: 483 RRSGNTHQMQQPQ----FMRNSNQGIR------YLDNARNGTD----QSVVSMVPVPFEV 528
R + + Q P+ + +R Y RN Q V+M V
Sbjct: 481 RVANTSTQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNPQQHLNAQPQVTMQQSAVHV 540
Query: 529 SGMPATPVETPRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
G TLT S LASA P ++ +MLGE+L+P ++ + P A K+TGM
Sbjct: 541 QGQ---------------ETLTASMLASAPPQEQKQMLGERLFPPIQAMHPTLAGKITGM 585
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGS 632
LLE+D +E+LH++ESPE+L +KV EA+AVLQ A+ + + S
Sbjct: 586 LLEIDNSELLHMLESPESLHSKVDEAVAVLQAHQAKEATQKAVNS 630
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 170/298 (57%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S Y +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQH 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
+ A+ A+ +N +I K V + R + V N++V NL +++ ++ L
Sbjct: 62 PKDAERALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVG----NIFVKNLDKSINNKVLYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NGT ND+ +VGR + R
Sbjct: 118 TVSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L AK ++ N+Y+KN + ++DE+LK+LF +FG S KVM D+
Sbjct: 177 KEREAELGAKAKE----------FPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDARKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|495594|gb|AAA70421.1| poly(A)-binding protein [Drosophila melanogaster]
Length = 632
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 282/645 (43%), Positives = 367/645 (56%), Gaps = 79/645 (12%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL Q+VNES L+D FS V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF + KPIRIM+S RDPS+R+SG GNVFIKNLD +IDNKA+ DTF+AFG +LSCKVA
Sbjct: 63 MNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
D G SKGYGFV FE EEAA +I +NGML+N K+VYVG F+ R+E+ + FTN
Sbjct: 123 TDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEQELGEKAKLFTN 182
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
VYV N E DE LK+ F +G ITS VM DGKS+ FGFV F++ +AA AAV+ LN
Sbjct: 183 VYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALN 242
Query: 269 GTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
G + K YV RAQK+AER+ +L+ KFE+ + R+E + G NLY+KNLDD+I+D++L+
Sbjct: 243 GKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLR 302
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
FS +G ITS KVM D+ G SKG GF F+ EAT A+ E+NG+++G KPLYVA+AQR
Sbjct: 303 IAFSPYGNITSAKVMTDEEGRSKGFGFVCFNPESEATCAVTELNGRVVGSKPLYVALAQR 362
Query: 388 KEERKARLQA------------QFAQIRAPGGMSPL------------ASGIPGYHHGAP 423
KEERKA L + Q QI P S S + P
Sbjct: 363 KEERKADLASQYMRHMTGMRMQQLGQIYQPNAASGFFVPTLPSNQRFFGSQVATQMRNTP 422
Query: 424 RLGPQ-----------------------------QLYYGQGTPGLMPPQAAGYGFQQQVF 454
R PQ Q PQ G
Sbjct: 423 RWVPQVRPPAAIQGVQAGAAAAGGFQGTAGAVPTQFRSAAAGARGAQPQVQGTHAAAAAA 482
Query: 455 PGLRPGGPNYIMPYHLQRQVHPG-QRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNG 513
+R G I Q+ P Q G + +G Q R SN +Y N RN
Sbjct: 483 NNMRNTGARAITG---QQTAAPNMQIPGAQIAGGAQQ-------RTSN--YKYTSNMRNP 530
Query: 514 TDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLV 573
+ P+P ++ G + + + S LA+A P ++ ++LGE+LYP++
Sbjct: 531 PVPQLHQTQPIPQQLQGKNSEKL------------IASLLANAKPQEQKQILGERLYPMI 578
Query: 574 ENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
E++ A K+TGMLLE++ +E+LH+IE EALK KV EA+AVLQ
Sbjct: 579 EHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQ 623
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEEATRALN 368
A+LY+ +L +N+ L + FS G + S +V D S G + F P +A RAL+
Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 369 EMNGKMIGRKPLYVAVAQR 387
MN ++ KP+ + +QR
Sbjct: 62 TMNFDLVRNKPIRIMWSQR 80
>gi|194224457|ref|XP_001500563.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Equus
caballus]
Length = 612
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 282/631 (44%), Positives = 376/631 (59%), Gaps = 52/631 (8%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+GY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 6 AGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF I G+PIRIM+S RDP +RKSG GNVFIKNL+ SIDNKAL DTF+ FG +
Sbjct: 66 ERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNVFIKNLEDSIDNKALYDTFSTFGNI 125
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKV D +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F R+ER +
Sbjct: 126 LSCKVVCDDHG-SRGFGFVHFETHEAAQQAISTMNGMLLNDRKVFVGHFKSRREREAELG 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ FTN+YV NL V + L+ +F FG + S VM+D G SR FGFVNF+ + A
Sbjct: 185 ARATAFTNIYVKNLPGHVDERGLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEKHEEA 244
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
AV +NG + ++ YVGRAQKR ER+ +L+ +FE + R + +G NLY+KNLDDS
Sbjct: 245 QKAVMDMNGMQVSGRLLYVGRAQKRGERQNELKRRFEHTKQDRLNRCQGVNLYVKNLDDS 304
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
I+DEKL++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG++IG KPL
Sbjct: 305 IDDEKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIIGTKPL 363
Query: 381 YVAVAQRKEERKARLQAQFAQ----IRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGT 436
YVA+AQRKEERKA L Q+ Q +RA GG P LG Q
Sbjct: 364 YVALAQRKEERKAILTNQYMQRLSTMRALGG---------------PFLGSFQQPTSYFL 408
Query: 437 PGLM--PPQAAGYGFQQQVFPG-------LRPGGPNYIMPYHLQRQVHPGQRTGVRRSGN 487
P + P QA YG P RP + + P + R+ Q VR++
Sbjct: 409 PAMAQPPAQAEHYGSSPSRQPAPRWTTQPPRPSSASMVRPPAMSRRPL-AQVCSVRQTST 467
Query: 488 THQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSM--------VPVPFEVSGMPATPVETP 539
P R +N G + G S+ P EV PA + P
Sbjct: 468 QVPYLVPHTQRVANIGTQTPGPGGAGCSTPGRSLPTHRYFLATPNTHEVQE-PAVRILGP 526
Query: 540 RPVPVPISTLTSALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLH 598
P LT+++ +A+P + +M+GE+LYPL+ + A K+TGMLLE+D +E+L
Sbjct: 527 EP-------LTASMLAAAPLHQQKQMIGERLYPLIYEVHTQLAGKITGMLLEIDNSELLL 579
Query: 599 LIESPEALKTKVAEAMAVLQ--EAAARSDVN 627
++ESPE+L KV EA+AVLQ +A ++ VN
Sbjct: 580 MLESPESLNAKVEEALAVLQAHQAMEQTKVN 610
>gi|426391820|ref|XP_004062264.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Gorilla
gorilla gorilla]
Length = 614
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 269/608 (44%), Positives = 377/608 (62%), Gaps = 24/608 (3%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SGY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 6 SGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF + G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +
Sbjct: 66 ERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNI 125
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKVA D +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F R+ER +
Sbjct: 126 LSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAELG 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +FTN+YV NL V ++ L+ +F FG + S VM+D+ G SRCFGFVNF+ + A
Sbjct: 185 ARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEA 244
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
AV +NG + ++ Y GRAQKR ER+ +L+ +FEQ + R + +G NLY+KNLDDS
Sbjct: 245 QKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDS 304
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
I+D+KL++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG+++G KPL
Sbjct: 305 IDDDKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 363
Query: 381 YVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPG--------YHHGAPRLGPQQLYY 432
YVA+AQRKEERKA L Q+ Q + M L++ + G + P+ Q YY
Sbjct: 364 YVALAQRKEERKAILTNQYMQRLS--TMRTLSNPLLGSFQQPSSYFLPAMPQPPAQAAYY 421
Query: 433 GQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ 492
G G + P Q A Q P +P + + VR++
Sbjct: 422 GCGP--VTPTQPAPRWTSQPPRPSCASVVRPPAVPRRPPAHI-----SSVRQASTQVPRT 474
Query: 493 QPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVP-ISTLTS 551
P R +N G + + G ++P + V+ P V +P LT+
Sbjct: 475 VPHTQRVANIGTQTTGPSGVGCCTPGRPLLPCKCSSAAHSTYRVQEP-AVHIPGQEPLTA 533
Query: 552 ALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
++ +A+P ++ +M+GE+LYPL+ ++ A K+TGMLLE+D +E+L ++ESPE+L K+
Sbjct: 534 SMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKI 593
Query: 611 AEAMAVLQ 618
EA+AVLQ
Sbjct: 594 DEAVAVLQ 601
>gi|224078006|ref|XP_002190593.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Taeniopygia guttata]
Length = 629
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 289/633 (45%), Positives = 384/633 (60%), Gaps = 66/633 (10%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
GY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 7 GYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAE 66
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A + +NF I G+PIRIM+S RDP +RKSG GNVFIKNLD SIDNKAL DTF+AFG +L
Sbjct: 67 RALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGNIL 126
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--N 201
SCKV D NG S+GYGFV FE EAA AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 127 SCKVVCDENG-SRGYGFVHFETHEAATRAIETMNGMLLNDRKVFVGHFKSRKEREAEVGA 185
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
+ +FTNVY+ N + + D+ L++IF FG S VM D++G+S+ FGFVNF+ + A
Sbjct: 186 RAIEFTNVYIKNFGDDMDDDRLREIFSRFGKTLSVKVMMDNNGRSKGFGFVNFEKHEEAQ 245
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV +NG N ++ YVGRAQKR ER+++L+ KFEQ + R + +G NLY+KNLDD I
Sbjct: 246 KAVADMNGKEINGRLLYVGRAQKRLERQSELKRKFEQMKQERVNRYQGVNLYVKNLDDGI 305
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DE+L++ FS +GTITS KVM + G SKG GF FS PEEAT+A+ EMNG+++ KPLY
Sbjct: 306 DDERLRKEFSPYGTITSAKVMTE-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLY 364
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMP 441
VA+AQRKEERKA L Q+ Q A +PG P LG Q G P +
Sbjct: 365 VALAQRKEERKAILTNQYMQRLA------TMRALPG-----PLLGSFQTPSGYFLPPMPQ 413
Query: 442 PQ--AAGYGFQQQVFPGLRPGG---------PNYIMPYHLQRQVHPGQR-----TGVRRS 485
PQ AA YG V P +RP P Y + R P +R + R++
Sbjct: 414 PQTRAAFYG-PSPVVP-VRPATRWSAQPSRPPLYPEATPILRAAVPPRRLLSNISTTRQA 471
Query: 486 GNTHQMQQPQFMRNSNQGI--------------------RYLDNARNGTDQSVVSMVPVP 525
PQ R N G +Y +ARN Q + M PV
Sbjct: 472 STQVPRVPPQAQRLVNIGTQTVSTRLPSSSALPRGTQQYKYSSSARNM--QPMGHMPPV- 528
Query: 526 FEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVT 585
G PA V+ P+ S LA+A P ++ +M+GE+LYPL+ + P A K+T
Sbjct: 529 ----GEPAVHVQGQEPL------TASLLAAAPPQEQKQMIGERLYPLIHVLHPSLAGKIT 578
Query: 586 GMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
GMLLE+D +E+L L+ESP++L++K+ EA+ VLQ
Sbjct: 579 GMLLEIDNSELLLLLESPDSLRSKIEEAVTVLQ 611
>gi|114682135|ref|XP_514668.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 2
[Pan troglodytes]
gi|397511247|ref|XP_003825989.1| PREDICTED: polyadenylate-binding protein 1-like [Pan paniscus]
Length = 614
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 269/608 (44%), Positives = 380/608 (62%), Gaps = 24/608 (3%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SGY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 6 SGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF + G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +
Sbjct: 66 ERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNI 125
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKVA D +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F R+ER +
Sbjct: 126 LSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAELG 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +FTN+YV NL V ++ L+++F FG + S VM+D+ G SRCFGFVNF+ + A
Sbjct: 185 ARALEFTNIYVKNLPVDVDEQGLQELFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEA 244
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
AV +NG + ++ Y GRAQKR ER+ +L+ +FEQ + R + +G NLY+KNLDDS
Sbjct: 245 QKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDS 304
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
I+D+KL++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG+++G KPL
Sbjct: 305 IDDDKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 363
Query: 381 YVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPG--------YHHGAPRLGPQQLYY 432
YVA+AQRKEERKA L Q+ Q + M L++ + G + P+ Q YY
Sbjct: 364 YVALAQRKEERKAILTNQYMQRLS--TMRTLSNPLLGSFQQPSSYFLPAMPQPPAQAAYY 421
Query: 433 GQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ 492
G G + P Q A Q P ++ + + P + VR++
Sbjct: 422 GCGP--VTPTQPAPRWTSQPPRPSC-----ASMVRPPVVPRRPPAHISSVRQASTQVPRT 474
Query: 493 QPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVP-ISTLTS 551
P R +N G + + G ++P + V+ P V +P LT+
Sbjct: 475 VPHTQRVANIGTQTTGPSGVGCCTPGRPLLPCKCSSAAHSTYRVQEP-AVHIPGQEPLTA 533
Query: 552 ALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
++ +A+P ++ +M+GE+LYPL+ ++ A K+TGMLLE+D +E+L ++ESPE+L K+
Sbjct: 534 SMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKI 593
Query: 611 AEAMAVLQ 618
EA+AVLQ
Sbjct: 594 DEAVAVLQ 601
>gi|297707183|ref|XP_002830392.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Pongo
abelii]
Length = 614
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 269/608 (44%), Positives = 378/608 (62%), Gaps = 24/608 (3%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SGY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 6 SGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF + G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +
Sbjct: 66 ERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNI 125
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKVA D +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F R+ER +
Sbjct: 126 LSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAELG 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +FTN+YV NL V ++ L+ +F FG + S VM+D+ G SRCFGFVNF+ + A
Sbjct: 185 ARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEA 244
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
AV +NG + ++ Y GRAQKR ER+ +L+ +FEQ + R + +G NLY+KNLDDS
Sbjct: 245 QKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDS 304
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
I+D+KL++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG+++G KPL
Sbjct: 305 IDDDKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 363
Query: 381 YVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPG--------YHHGAPRLGPQQLYY 432
YVA+AQRKEERKA L Q+ Q + M L++ + G + P+ Q YY
Sbjct: 364 YVALAQRKEERKAILTNQYMQRLS--TMRTLSNPLLGSFQQPSSYFLPAVPQPPAQAAYY 421
Query: 433 GQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ 492
G G + P Q A Q P ++P + + VR++
Sbjct: 422 GCGP--VTPTQPAPRWTSQPPRPSCASVVRPPVVPRRPPAHI-----SSVRQASTQVPHT 474
Query: 493 QPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVP-ISTLTS 551
P R +N G + + G ++P + V+ P V +P LT+
Sbjct: 475 VPHTQRVANIGTQTTGPSGVGCCTPGRPLLPYKCSSAAHSTYRVQEP-AVHIPGQEPLTA 533
Query: 552 ALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
++ +A+P ++ +M+GE+LYPL+ ++ A K+TGMLLE+D +E+L ++ESPE+L K+
Sbjct: 534 SMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKI 593
Query: 611 AEAMAVLQ 618
EA+AVLQ
Sbjct: 594 DEAVAVLQ 601
>gi|321261800|ref|XP_003195619.1| polyadenylate-binding protein [Cryptococcus gattii WM276]
gi|317462093|gb|ADV23832.1| polyadenylate-binding protein, putative [Cryptococcus gattii WM276]
Length = 675
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 278/612 (45%), Positives = 369/612 (60%), Gaps = 32/612 (5%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ +V E+ L+++F+ + V S+RVCRD R SLGYAYVNY N D A
Sbjct: 47 SASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 106
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I G+ RIM+S RDP++RK+G GN+FIKNLD SIDNKAL DTFAAFG +LSCK
Sbjct: 107 EHLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILSCK 166
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
V D NG+S+G+ FV + EAA AIK +NGML+NDK+VYVG V ++ER + +
Sbjct: 167 VGTDENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGHHVGKKERLSKVEELRA 226
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
+FTNVY+ N+ VTD + + + FG S + +D G S+ FGFVN+++ ++A AV
Sbjct: 227 QFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEQGVSKGFGFVNYENHESAKQAV 286
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
++LN N K Y GRAQ ++EREA+L+ E++RI K G NLY+KNLDD +D+
Sbjct: 287 DELNEKEINGKKLYAGRAQTKSEREAELKKSHEEKRIENEAKSAGVNLYIKNLDDEWDDD 346
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
+L+ F FGTITS KVM D G S+G GF +S P+EAT+A++EMNGKMIG KPLYVA+
Sbjct: 347 RLRAEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVAL 406
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSPLASGIPGY--HHGAPRLG-PQQLYYGQGTPGLMP 441
AQRK+ R+ L++Q AQ RA M +G PG + G P G P YGQ PG+ P
Sbjct: 407 AQRKDVRRQALESQIAQ-RAQQRMQ-YGAGFPGMQGYMGQPMYGYPPMPGYGQPMPGMPP 464
Query: 442 PQAAGYGF------QQQVFPGLRPGG---PNYIMPYHLQRQV-HPGQRTGVRRSGNTHQM 491
+ G+ Q P P G P + Y + QV +PG R G
Sbjct: 465 VRGPMMGYPGAPQNMMQSRPRFNPNGQPLPGGVPAYGMPPQVPYPGAPGYPVRPGGARIP 524
Query: 492 QQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPF----EVSGMPATPVETPRPVPVPIS 547
P N+N RNG V + +P MPA P E P P
Sbjct: 525 AAP----NAN-------GPRNGGPSPVGAPQGLPAGSIPRGGQMPARPHEQAAPAPQAGR 573
Query: 548 TLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALK 607
+LA A+P ++ +MLGE LYPL+ +P A K+TGMLLEMD E+LHL+ES AL+
Sbjct: 574 LDAQSLARAAPAEQKQMLGEALYPLIHETQPELAGKITGMLLEMDNAELLHLVESQPALQ 633
Query: 608 TKVAEAMAVLQE 619
KV EA+ VL E
Sbjct: 634 EKVDEALRVLAE 645
>gi|185135971|ref|NP_001118228.1| polyadenylate-binding protein 1-like [Homo sapiens]
gi|74754038|sp|Q4VXU2.1|PAP1L_HUMAN RecName: Full=Polyadenylate-binding protein 1-like
gi|119596298|gb|EAW75892.1| hCG2019100, isoform CRA_f [Homo sapiens]
Length = 614
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 269/608 (44%), Positives = 379/608 (62%), Gaps = 24/608 (3%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SGY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 6 SGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF + G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +
Sbjct: 66 ERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNI 125
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKVA D +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F R+ER +
Sbjct: 126 LSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAELG 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +FTN+YV NL V ++ L+ +F FG + S VM+D+ G SRCFGFVNF+ + A
Sbjct: 185 ARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEA 244
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
AV +NG + ++ Y GRAQKR ER+ +L+ +FEQ + R + +G NLY+KNLDDS
Sbjct: 245 QKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDS 304
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
I+D+KL++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG+++G KPL
Sbjct: 305 IDDDKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 363
Query: 381 YVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPG--------YHHGAPRLGPQQLYY 432
YVA+AQRKEERKA L Q+ Q + M L++ + G + P+ Q YY
Sbjct: 364 YVALAQRKEERKAILTNQYMQRLS--TMRTLSNPLLGSFQQPSSYFLPAMPQPPAQAAYY 421
Query: 433 GQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ 492
G G + P Q A Q P ++ + + P + VR++
Sbjct: 422 GCGP--VTPTQPAPRWTSQPPRPSC-----ASMVRPPVVPRRPPAHISSVRQASTQVPRT 474
Query: 493 QPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVP-ISTLTS 551
P R +N G + + G ++P + V+ P V +P LT+
Sbjct: 475 VPHTQRVANIGTQTTGPSGVGCCTPGRPLLPCKCSSAAHSTYRVQEP-AVHIPGQEPLTA 533
Query: 552 ALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
++ +A+P ++ +M+GE+LYPL+ ++ A K+TGMLLE+D +E+L ++ESPE+L K+
Sbjct: 534 SMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKI 593
Query: 611 AEAMAVLQ 618
EA+AVLQ
Sbjct: 594 DEAVAVLQ 601
>gi|441613453|ref|XP_004088139.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 638
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 284/644 (44%), Positives = 393/644 (61%), Gaps = 56/644 (8%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS+ ++S+RVCRD S YAYVN+ +P+DA +
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITPHSSNYAYVNFQHPKDAEH 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+F+KNLD SI+NKAL DT +AFG VLS
Sbjct: 68 ALDTMNFDVIKGKPLRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNVLS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE EAA+ AI+ +NG+ +ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETREAAERAIEKMNGIPLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +F NVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTDQSGKSKGFGFVSFEKHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ---ERISRYEKLKGANLYLKNLDD 319
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ +RI+RY+ + NLY+KNLDD
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKCKFEQMKQDRITRYQVV---NLYVKNLDD 303
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
+I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KP
Sbjct: 304 AIDDERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362
Query: 380 LYVAVAQRKEERKARLQAQFAQIRA--PGGMSPL-------------ASGIPGYHHGAPR 424
LYVA+AQRKEER+A L ++ Q +A P +P+ + +P + A
Sbjct: 363 LYVALAQRKEERQAYLTNEYMQRKASVPAVPNPVINPYQPAPPSGYFMAAVPQTQNHAAY 422
Query: 425 LGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVHPGQRTGVR 483
P Q + +P A + FQ + PG +RP P +P++ R
Sbjct: 423 YPPSQTAQLRPSPCWTAQGARPHPFQNK--PGAIRPAAPR--VPFNTMRPA--------- 469
Query: 484 RSGNTHQMQQPQFMRN-SNQGIRYLDNARNGTDQSVVSMVPVPFEVSGM----------P 532
S ++ PQ + N S + + A V VP +G+ P
Sbjct: 470 -SSQVPRVMSPQRVANKSTKTVGPRPAAAAAAATPAVHTVPRYKYAAGVRNPQQHLNAQP 528
Query: 533 ATPVETPRPVPVPISTLTSA-LASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEM 591
++ P TLT+A LASA P ++ +MLGE+L+PL++ + P A K+TGMLLE
Sbjct: 529 QVKMQQPAVHVQGQETLTAAMLASAPPKEQKQMLGERLFPLIQAMHPTLAGKITGMLLET 588
Query: 592 DQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
D +E+LH++ESPE+L +KV EA+ VLQ + AA+ VN G
Sbjct: 589 DNSELLHMLESPESLCSKVDEAVVVLQAHQAKEAAQKAVNSATG 632
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D S Y +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITPHSSNYAYVNFQH 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
+ A++A+ +N +I K + + R + V N++V NL +++ ++ L
Sbjct: 62 PKDAEHALDTMNFDVIKGKPLRIMWSQRDPSLRKSGVG----NIFVKNLDKSINNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
FG + S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TVSAFGNVLSCKVVCDENG-SKGYGFVHFETREAAERAIEKMNGIPLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM DQ
Sbjct: 177 KEREAELGARAKE----------FPNVYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTDQ 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKCKFEQMK 284
>gi|327285428|ref|XP_003227435.1| PREDICTED: polyadenylate-binding protein 4-like [Anolis
carolinensis]
Length = 616
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 283/624 (45%), Positives = 380/624 (60%), Gaps = 77/624 (12%)
Query: 54 VVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKS 113
V+S+RVCRD R SL YAYVN+ P DA A + +NF I GKPIRIM+S RDPS+RKS
Sbjct: 24 VLSIRVCRDMITRRSLFYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKS 83
Query: 114 GYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAI 173
G GNVFIKNLD SIDNKAL DTF+AFG +LSCKV D NG SKGY FV FE ++AA AI
Sbjct: 84 GVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAI 142
Query: 174 KMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFG 231
+ +NGML+ND++V+VG F R+ER + + +FTNVY+ N + + DE LK++FG +G
Sbjct: 143 EKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFGKYG 202
Query: 232 TITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
S VM D GKS+ FGFV+F+ + A AVE++NG N K+ +VGRAQK+ ER+A+
Sbjct: 203 KTLSVKVMTDPTGKSKGFGFVSFEKHEEANKAVEEMNGKDINGKMVFVGRAQKKVERQAE 262
Query: 292 LRAKFEQ---ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGF 348
L+ +FEQ ERISRY+ G NLY+KNLDD+I+DEKL++ FS FG+ITS KVM+++ G
Sbjct: 263 LKRRFEQLKQERISRYQ---GVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEE-GR 318
Query: 349 SKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ----IRA 404
SKG GF FS PEEAT+A+ EMNG+++G KPLYVA+AQRKEERKA L Q+ Q +RA
Sbjct: 319 SKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRA 378
Query: 405 -PGG-----MSPLASG-----IPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQV 453
P P A G +P P P Q+ + P Q G Q
Sbjct: 379 LPANAILNQFQPAAGGYFMPAVPQAQSRPPYYAPNQMTQIRPNPRW---QQGGRPQGFQG 435
Query: 454 FPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNA--R 511
P +R GP + R + P +GN Q R L A R
Sbjct: 436 MPNMRQSGPRPNL-----RHLAP--------AGNA-------------QASRGLPGAPQR 469
Query: 512 NGTDQSVVSMVPVPFEVSGMP--------ATPVETPRPVPVPIST-------------LT 550
G + ++ P P + +P A+ V +P P P+
Sbjct: 470 VGIPPTGPNLAPRPPAAAQVPRAVPPYKYASSVRSPHPAVQPLQAPQPAVHVQGQEPLTA 529
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
S LA+A P ++ +MLGE+L+PL++ + A K+TGMLLE+D +E+LH++ESPE+L++KV
Sbjct: 530 SMLAAAPPQEQKQMLGERLFPLIQAMHLSLAGKITGMLLEIDNSELLHMLESPESLRSKV 589
Query: 611 AEAMAVLQEAAARSDVNEKLGSLA 634
EA+AVLQ A+ + +K+G +A
Sbjct: 590 EEAVAVLQAHQAKKEAAQKVGIVA 613
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 23/204 (11%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + ++++ +L +LF + + +SV+V D + +S G+ +V++ ++A A E
Sbjct: 178 TNVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTDPTGKSK-GFGFVSFEKHEEANKAVE 236
Query: 88 ALNFMPINGKPI----------------RIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
+N INGK + R + I + N++IKNLD +ID++
Sbjct: 237 EMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEK 296
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L F+ FG++ S KV ++ G+SKG+GFV F + E A A+ +NG ++ K +YV L
Sbjct: 297 LRKEFSPFGSITSAKVMLEE-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 355
Query: 192 VRRQERAQQNVSPKFTNVYVNNLA 215
R++ER TN Y+ +A
Sbjct: 356 QRKEERKAH-----LTNQYMQRIA 374
>gi|58271356|ref|XP_572834.1| polyadenylate-binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134114714|ref|XP_774065.1| hypothetical protein CNBH1100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819167|sp|P0CP47.1|PABP_CRYNB RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|338819168|sp|P0CP46.1|PABP_CRYNJ RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|50256695|gb|EAL19418.1| hypothetical protein CNBH1100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229093|gb|AAW45527.1| polyadenylate-binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 673
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 277/612 (45%), Positives = 369/612 (60%), Gaps = 32/612 (5%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ +V E+ L+++F+ + V S+RVCRD R SLGYAYVNY N D A
Sbjct: 45 SASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 104
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I G+ RIM+S RDP++RK+G GN+FIKNLD SIDNKAL DTFAAFG +LSCK
Sbjct: 105 EHLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILSCK 164
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
V D NG+S+G+ FV + EAA AIK +NGML+NDK+VYVG V ++ER + +
Sbjct: 165 VGTDENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGHHVGKKERLSKVEELRA 224
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
+FTNVY+ N+ VTD + + + FG S + +D G S+ FGFVN+++ ++A AV
Sbjct: 225 QFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEKGVSKGFGFVNYENHESARKAV 284
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
++LN N K Y GRAQ ++EREA+L+ E++R+ K G NLY+KNLDD +D+
Sbjct: 285 DELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYVKNLDDEWDDD 344
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
+L+ F FGTITS KVM D G S+G GF +S P+EAT+A++EMNGKMIG KPLYVA+
Sbjct: 345 RLRAEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVAL 404
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSPLASGIPGY--HHGAPRLG-PQQLYYGQGTPGLMP 441
AQRK+ R+ L++Q AQ RA M +G PG + G P G P YGQ PG+ P
Sbjct: 405 AQRKDVRRQALESQIAQ-RAQQRMQ-YGAGFPGMQGYMGQPMYGYPPMPGYGQPMPGMPP 462
Query: 442 PQAAGYGF------QQQVFPGLRPGG---PNYIMPYHLQRQV-HPGQRTGVRRSGNTHQM 491
+ G+ Q P P G P + Y + QV +PG R G
Sbjct: 463 VRGPMMGYPGAPQNMMQSRPRFNPNGQPLPGGVPAYGMPPQVPYPGAPGYPVRPGGARIP 522
Query: 492 QQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPF----EVSGMPATPVETPRPVPVPIS 547
P N+N RNG V + +P MPA P E P P
Sbjct: 523 AAP----NAN-------GPRNGGPSPVGAPQGLPAGSIPRGGQMPARPHEQAAPAPQAGR 571
Query: 548 TLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALK 607
+LA A+P ++ +MLGE LYPL+ +P A K+TGMLLEMD E+LHL+ES AL+
Sbjct: 572 LDAQSLARAAPAEQKQMLGEALYPLIHETQPELAGKITGMLLEMDNAELLHLVESQPALQ 631
Query: 608 TKVAEAMAVLQE 619
KV EA+ VL E
Sbjct: 632 EKVDEALRVLAE 643
>gi|405122394|gb|AFR97161.1| polyadenylate-binding protein [Cryptococcus neoformans var. grubii
H99]
Length = 670
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 277/612 (45%), Positives = 368/612 (60%), Gaps = 32/612 (5%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ +V E+ L+++F+ + V S+RVCRD R SLGYAYVNY N D A
Sbjct: 47 SASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 106
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I G+ RIM+S RDP++RK+G GN+FIKNLD SIDNKAL DTFAAFG +LSCK
Sbjct: 107 EHLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILSCK 166
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
V D NG+S+G+ FV + EAA AIK +NGML+NDK+VYVG V ++ER + +
Sbjct: 167 VGTDENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGHHVGKKERLSKVEELRA 226
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
+FTNVY+ N+ VTD + + + FG S + +D G S+ FGFVN++ ++A AV
Sbjct: 227 QFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEKGVSKGFGFVNYEHHESARKAV 286
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
++LN N K Y GRAQ ++EREA+L+ E++R+ K G NLY+KNLDD +D+
Sbjct: 287 DELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYIKNLDDEWDDD 346
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
+L+ F FGTITS KVM D G S+G GF +S P+EAT+A++EMNGKMIG KPLYVA+
Sbjct: 347 RLRAEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVAL 406
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSPLASGIPGY--HHGAPRLG-PQQLYYGQGTPGLMP 441
AQRK+ R+ L++Q AQ RA M +G PG + G P G P YGQ PG+ P
Sbjct: 407 AQRKDVRRQALESQIAQ-RAQQRMQ-YGTGFPGMQGYMGQPMYGYPPMPGYGQPMPGMPP 464
Query: 442 PQAAGYGF------QQQVFPGLRPGG---PNYIMPYHLQRQV-HPGQRTGVRRSGNTHQM 491
+ G+ Q P P G P + Y + QV +PG R G
Sbjct: 465 VRGPMMGYPGAPQNMMQSRPRFNPNGQPLPGGVPAYGMPPQVPYPGAPGYPVRPGGARIP 524
Query: 492 QQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPF----EVSGMPATPVETPRPVPVPIS 547
P N+N RNG V + +P MPA P E P P
Sbjct: 525 AAP----NAN-------GPRNGGPSPVGAPQGLPAGSMPRGGQMPARPHEQAAPAPQAGR 573
Query: 548 TLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALK 607
+LA A+P ++ +MLGE LYPL+ +P A K+TGMLLEMD E+LHL+ES AL+
Sbjct: 574 LDAQSLARAAPAEQKQMLGEALYPLIHETQPELAGKITGMLLEMDNAELLHLVESQPALQ 633
Query: 608 TKVAEAMAVLQE 619
KV EA+ VL E
Sbjct: 634 EKVDEALRVLAE 645
>gi|109120204|ref|XP_001091129.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 637
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 277/645 (42%), Positives = 383/645 (59%), Gaps = 59/645 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS+ ++S+RVCRD R S YAYVN+ +P+DA
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+R+SG GN+F+KNLD SI+NK L DT +AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE EAA+ AI+ +NG L+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +F NVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + + NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKHIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L ++ Q +RA P G + +P + A
Sbjct: 366 ALAQRKEERQAHLTNEYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAVPQTQNRAAYY 423
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVH---PGQRTGV 482
P Q+ + +P A + FQ + G+RP P +P+ R P +
Sbjct: 424 PPSQIAQLRPSPCWTAQGARPHPFQNKPG-GIRPAAPR--LPFSTMRPTSSQVPRVMSTQ 480
Query: 483 RRSGNTHQMQQPQ----FMRNSNQGIR------YLDNARNGTD----QSVVSMVPVPFEV 528
R + + Q P+ + +R Y RN Q V+M V
Sbjct: 481 RVANTSTQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNPQQHLNAQPQVTMQQSAVHV 540
Query: 529 SGMPATPVETPRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
G TLT S LASA P ++ +MLGE+L+P ++ + P A K+TGM
Sbjct: 541 QGQ---------------ETLTASMLASAPPQEQKQMLGERLFPPIQAMHPTLAGKITGM 585
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGS 632
LLE+D +E+LH++ESP++L++KV EA+AVLQ A+ + + S
Sbjct: 586 LLEIDNSELLHMLESPQSLRSKVDEAVAVLQAHQAKEATQKAVNS 630
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 170/298 (57%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S Y +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQH 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
+ A+ A+ +N +I K V + R + V N++V NL +++ ++ L
Sbjct: 62 PKDAERALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVG----NIFVKNLDKSINNKVLYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NGT ND+ +VGR + R
Sbjct: 118 TVSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L AK ++ N+Y+KN + ++DE+LK+LF +FG S KVM D+
Sbjct: 177 KEREAELGAKAKE----------FPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQKKVERQTELKRKFEQMK 284
>gi|397482906|ref|XP_003812655.1| PREDICTED: polyadenylate-binding protein 3-like [Pan paniscus]
Length = 634
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 279/637 (43%), Positives = 387/637 (60%), Gaps = 46/637 (7%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R S YAYVN+ +P+DA +
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEH 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+F+KNLD SI+NKAL DT +AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPLRIMWSQRDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
C V D NG SKGYGFV FE EAA+ AI+ +NGML+N ++V+VG F R+ER +
Sbjct: 128 CNVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +F NVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDD 319
AV+++NG N K YVGRAQK+ ER+ +L+ FE Q+RI+RY+ + NLY+KNLDD
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVV---NLYVKNLDD 303
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KP
Sbjct: 304 DIDDERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362
Query: 380 LYVAVAQRKEERKARLQAQFAQ----IRA-PGGMSP----LASGIPGYHHGAPRLGPQQL 430
LYVA+AQRKEER+A L ++ Q +RA P +P + +P + A P Q+
Sbjct: 363 LYVALAQRKEERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVPQTQNHAAYYPPSQI 422
Query: 431 YYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPG--QRTGVRRSGNT 488
+ +P A + FQ + +RPG P +P+ R + T +R NT
Sbjct: 423 AQLRPSPRWTAQGARPHPFQNKP-SAIRPGAPR--VPFSTMRPASSQIPRVTSTQRVANT 479
Query: 489 HQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPF------------EVSGMPATPV 536
G R A + ++ VP ++ P +
Sbjct: 480 S---------TQTVGPRPAAAAAAAAAAATPAVRTVPRYKYAAGVRNPQQHLNAQPQVTM 530
Query: 537 ETPRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTE 595
+ P TLT S LASA P + +MLGE+L+PL++ + P A K+TGMLLE+D +E
Sbjct: 531 QQPAVHVQGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSE 590
Query: 596 VLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGS 632
+L+++ESPE+L++KV EA+AVLQ A+ + + S
Sbjct: 591 LLYMLESPESLRSKVDEAVAVLQAHQAKEATQKAVNS 627
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 173/299 (57%), Gaps = 18/299 (6%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID--SNGQSKGYGFVQFE 164
+PS ++++ +L + L + F+ G +LS +V D + G S Y +V F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRG-SSNYAYVNFQ 60
Query: 165 NEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLK 224
+ + A++A+ +N +I K + + ++ +R +++ N++V NL +++ ++ L
Sbjct: 61 HPKDAEHALDTMNFDVIKGKPLRI-MWSQRDPSLRKS---GMGNIFVKNLDKSINNKALY 116
Query: 225 KIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQK 284
FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG N + +VG+ +
Sbjct: 117 DTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKS 175
Query: 285 RAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
R EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM D
Sbjct: 176 RKEREAELGARAKE----------FPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD 225
Query: 345 QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ F Q++
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284
>gi|395745189|ref|XP_002824146.2| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Pongo
abelii]
Length = 636
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 281/646 (43%), Positives = 380/646 (58%), Gaps = 62/646 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R S YAYVN+ +P+DA +
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAEH 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S DPS+RKSG GN+F+KNLD SI+NKAL DT +AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQHDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +F NVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFEKHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDD 319
AV+++NG + K YVGRAQK+ ER+ +L+ KFE Q+RI+RY+ + NLY+KNLDD
Sbjct: 247 AVDEMNGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVV---NLYVKNLDD 303
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KP
Sbjct: 304 DIDDERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362
Query: 380 LYVAVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGA 422
LYVA+AQRKEER+A L ++ Q +RA P G + +P + A
Sbjct: 363 LYVALAQRKEERQAYLTNEYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAVPQTQNHA 420
Query: 423 PRLGPQQLYYGQGTPGLMPPQAAGYGFQQQ-----------VFPGLRPGGPNYIMPYHLQ 471
P Q+ + +P A + FQ + F +RP Q
Sbjct: 421 AYYPPSQIAQLRPSPCWTAQGARPHPFQNKPSAICPAAPRVPFSTMRPASSQVPRVMSTQ 480
Query: 472 RQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFE 527
R + +T R P + +Y RN Q V+M
Sbjct: 481 RVANTSTQTVGPRPAAAAAAATPAV--RTVPRYKYAAGVRNPQQHLNAQPEVTMQQPAVH 538
Query: 528 VSGMPATPVETPRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTG 586
V G TLT S LASA P + +MLGE+L+PL+E + P A K+TG
Sbjct: 539 VQGQ---------------ETLTASMLASAPPQKQKQMLGERLFPLIEAMRPTLAGKITG 583
Query: 587 MLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGS 632
MLLE+D +E+LH++ESPE+L +KV EA+AVLQ A+ + + S
Sbjct: 584 MLLEIDNSELLHMLESPESLGSKVDEAVAVLQAHQAKEATQKAVNS 629
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 165/299 (55%), Gaps = 25/299 (8%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ +V +L++++N LYD S ++S +V D++ S GY +V++ + A
Sbjct: 96 SGVGNI--FVKNLDKSINNKALYDTVSAFGNILSCKVVCDEN--GSKGYGFVHFETHEAA 151
Query: 83 ANAKEALNFMPINGKPIRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDTF 136
A E +N M +N + + + R+ + + + NV+IKN +D++ L D F
Sbjct: 152 ERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDLF 211
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG LS KV D +G+SKG+GFV FE E AQ A+ +NG ++ KQ+YVG ++ E
Sbjct: 212 GKFGPALSVKVMTDESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKKVE 271
Query: 197 RAQQNVSPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
R Q + KF N+YV NL + + DE L+K F FGTITSA VM +
Sbjct: 272 R-QTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEG- 329
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
G+S+ FGFV F SP+ A AV ++NG K YV AQ++ ER+A L ++ Q S
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEYMQRMAS 388
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S Y +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQH 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
+ A++A+ +N +I K V + + V N++V NL +++ ++ L
Sbjct: 62 PKDAEHALDTMNFDVIKGKPVRIMWSQHDPSLRKSGVG----NIFVKNLDKSINNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TVSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L AK ++ N+Y+KN + ++DE+LK+LF +FG S KVM D+
Sbjct: 177 KEREAELGAKAKE----------FPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|402882426|ref|XP_003904744.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 614
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 269/608 (44%), Positives = 376/608 (61%), Gaps = 24/608 (3%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SGY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 6 SGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF + G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +
Sbjct: 66 ERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNI 125
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKV D +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F R+ER +
Sbjct: 126 LSCKVVCDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAELG 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +FTN+YV NL V ++ L+ +F FG + S VM+D+ G SRCFGFVNF+ + A
Sbjct: 185 ARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEA 244
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
AV +NG + ++ Y GRAQKR ER+ +L+ +FEQ + R + +G NLY+KNLDDS
Sbjct: 245 QKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDS 304
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
I+D+KL++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG+++G KPL
Sbjct: 305 IDDDKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 363
Query: 381 YVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPG--------YHHGAPRLGPQQLYY 432
YVA+AQRKEERKA L Q+ Q + M L++ + G + P+ Q YY
Sbjct: 364 YVALAQRKEERKAILTNQYMQRLS--TMRTLSNPLLGSFQQPSSYFLPAVPQPPAQAAYY 421
Query: 433 GQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ 492
G G + P Q A Q P +MP + + VR++
Sbjct: 422 GCGP--VTPTQPAPRWTSQPPRPSCASMVRPPVMPRRPPAHI-----SSVRQASTQVPRM 474
Query: 493 QPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVP-ISTLTS 551
P R +N G + G ++P + ++ P V VP LT+
Sbjct: 475 VPHTQRVANIGTQTTGPGGVGCCTPGRPLLPYKCSSAAHSTYRIQEP-AVHVPGQEPLTA 533
Query: 552 ALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
++ +A+P ++ +M+GE+LYPL+ ++ A K+TGMLLE+D +E+L ++ESPE+L K+
Sbjct: 534 SMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKI 593
Query: 611 AEAMAVLQ 618
EA+AVLQ
Sbjct: 594 DEAVAVLQ 601
>gi|426374960|ref|XP_004054321.1| PREDICTED: polyadenylate-binding protein 3 [Gorilla gorilla
gorilla]
Length = 631
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 281/640 (43%), Positives = 385/640 (60%), Gaps = 55/640 (8%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R S YAYVN+ +P+DA +
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEH 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A +NF I GKP+RIM+S RDPS+RK G GN+F+KNLD SI+NKAL DT +AFG +LS
Sbjct: 68 ALHTMNFDVIKGKPLRIMWSQRDPSLRKRGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGQFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +F NVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ---ERISRYEKLKGANLYLKNLDD 319
AV+++NG N K YVGRAQK+ ER+ +L+ FEQ +RI+RY+ + NLY+KNLDD
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVV---NLYVKNLDD 303
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
I+DE+L + FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KP
Sbjct: 304 GIDDERLWKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362
Query: 380 LYVAVAQRKEERKARLQAQFAQ----IRA-PGGMSP----LASGIPGYHHGAPRLGPQQL 430
LYVA+AQRKEER+A L ++ Q +RA P +P + +P + A P Q+
Sbjct: 363 LYVALAQRKEERQAYLTNEYMQRTASVRAVPNQRAPPSGYFMAAVPQTQNHAAYYPPSQV 422
Query: 431 YYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVH---PGQRTGVRRSGN 487
+ +P A + FQ + +RPG P +P+ R P + R +
Sbjct: 423 AQLRPSPRWTAQGARPHPFQNKP-SAIRPGAPR--VPFSTMRPASSQVPRVMSTQRVANT 479
Query: 488 THQMQQPQ----FMRNSNQGIR------YLDNARNGTD----QSVVSMVPVPFEVSGMPA 533
+ Q P+ + +R Y RN Q V+M V G
Sbjct: 480 STQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQGQ-- 537
Query: 534 TPVETPRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMD 592
TLT S LASA P + +MLGE+L+PL++ + P A K+TGMLLE+D
Sbjct: 538 -------------ETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEID 584
Query: 593 QTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGS 632
+E+L+++ESPE+L++K EA+AVLQ A+ + + S
Sbjct: 585 NSELLYMLESPESLRSKAGEAVAVLQAHEAKEATEKAVNS 624
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 171/299 (57%), Gaps = 18/299 (6%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID--SNGQSKGYGFVQFE 164
+PS ++++ +L + L + F+ G +LS +V D + G S Y +V F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRG-SSNYAYVNFQ 60
Query: 165 NEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLK 224
+ + A++A+ +N +I K + + R ++ V N++V NL +++ ++ L
Sbjct: 61 HPKDAEHALHTMNFDVIKGKPLRIMWSQRDPSLRKRGVG----NIFVKNLDKSINNKALY 116
Query: 225 KIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQK 284
FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VG+ +
Sbjct: 117 DTVSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGQFKS 175
Query: 285 RAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
R EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM D
Sbjct: 176 RKEREAELGARAKE----------FPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD 225
Query: 345 QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ F Q++
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284
>gi|302565150|ref|NP_001181379.1| polyadenylate-binding protein 1-like [Macaca mulatta]
Length = 614
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 269/608 (44%), Positives = 376/608 (61%), Gaps = 24/608 (3%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SGY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 6 SGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF + G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +
Sbjct: 66 ERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNI 125
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKV D +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F R+ER +
Sbjct: 126 LSCKVVCDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAELG 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +FTN+YV NL V ++ L+ +F FG + S VM+D+ G SRCFGFVNF+ + A
Sbjct: 185 ARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEA 244
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
AV +NG + ++ Y GRAQKR ER+ +L+ +FEQ + R + +G NLY+KNLDDS
Sbjct: 245 QKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDS 304
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
I+D+KL++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG+++G KPL
Sbjct: 305 IDDDKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 363
Query: 381 YVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPG--------YHHGAPRLGPQQLYY 432
YVA+AQRKEERKA L Q+ Q + M L++ + G + P+ Q YY
Sbjct: 364 YVALAQRKEERKAILTNQYMQRLS--TMRTLSNPLLGSFQQPSSYFLPAVPQPPAQAAYY 421
Query: 433 GQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ 492
G G + P Q A Q P +MP + + VR++
Sbjct: 422 GCGP--VTPTQPAPRWTSQPPRPSCASMVRPPVMPRRPPAHI-----SSVRQASTQVPRM 474
Query: 493 QPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVP-ISTLTS 551
P R +N G + G ++P + V+ P V +P LT+
Sbjct: 475 VPHTQRVANIGTQTTGPGGVGCCTPGRPLLPYKCSSAAHSTYRVQEP-AVHIPGQEPLTA 533
Query: 552 ALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
++ +A+P ++ +M+GE+LYPL+ ++ A K+TGMLLE+D +E+L ++ESPE+L K+
Sbjct: 534 SMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKI 593
Query: 611 AEAMAVLQ 618
EA+AVLQ
Sbjct: 594 DEAVAVLQ 601
>gi|301763992|ref|XP_002917400.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 611
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 274/607 (45%), Positives = 374/607 (61%), Gaps = 27/607 (4%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
GY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 7 GYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAE 66
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A + +NF I G+P+RIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +L
Sbjct: 67 RALDTMNFEVIKGQPVRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNIL 126
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--N 201
SCKV D +G S+G+GFV FE EAA AI +NGML+ND++V+VG F R+ER +
Sbjct: 127 SCKVVCDDHG-SRGFGFVHFETHEAAHQAIATMNGMLLNDRKVFVGHFKSRREREAELGA 185
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
+ +FTN+YV NL V ++ L+ +F FG + S VM+D G SR FGFVNF+ + A
Sbjct: 186 RAMEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDIGHSRGFGFVNFEKHEEAQ 245
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV +NG + ++ YVGRAQKR ER+ +L+ +FEQ + R + +G NLY+KNLDDSI
Sbjct: 246 KAVMDMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRATRYQGVNLYVKNLDDSI 305
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DEKL++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG+++G KPLY
Sbjct: 306 DDEKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLY 364
Query: 382 VAVAQRKEERKARLQAQFAQ----IRAPGGMSPLASGI---PGYHHGAPRLGPQQLYYGQ 434
VA+AQRKEERKA L Q+ Q +RA GG PL Y A P Q Y
Sbjct: 365 VALAQRKEERKAILTNQYMQRLSTVRALGG--PLLGSFQQPASYFLPAVPQPPAQAAYYA 422
Query: 435 GTPGLMP-PQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQ 493
+P + P P+ + +RP P L+R P Q VR++
Sbjct: 423 SSPSVQPAPRWTAQPPRVSSASMVRP-------PAMLRRP--PAQVNSVRQASTQVPPPG 473
Query: 494 PQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVP-ISTLTSA 552
P R +N G + +G S + + + S P V +P LT++
Sbjct: 474 PHTQRVANIGTQ--TTGASGVGYSTPTGPVLTHKYSSAAHNPGVRESAVCIPGQEPLTAS 531
Query: 553 LASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVA 611
+ +A+P ++ +M+GE+LYPL+ + A K+TGMLLE+D +E+L ++ESPE+L KV
Sbjct: 532 MLAAAPLHEQKQMIGERLYPLIYDTHTQLAGKITGMLLEIDNSELLLMLESPESLNAKVE 591
Query: 612 EAMAVLQ 618
EA+AVLQ
Sbjct: 592 EALAVLQ 598
>gi|320167378|gb|EFW44277.1| poly A binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 662
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 290/637 (45%), Positives = 377/637 (59%), Gaps = 51/637 (8%)
Query: 22 PSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQD 81
PSG SLYVGDL V E+QL+++F+ + VVS+RVCRD R SLGYAYVN+ D
Sbjct: 43 PSG----SLYVGDLHPEVTEAQLFEIFNNIGPVVSIRVCRDAITRRSLGYAYVNFHAAVD 98
Query: 82 AANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGT 141
A A + LN+ I GKP RIM+S RDP++RKSG GNVFIKNLD +IDNKAL DTF+AFG
Sbjct: 99 AERALDTLNYSLIRGKPCRIMWSQRDPAVRKSGLGNVFIKNLDKTIDNKALLDTFSAFGN 158
Query: 142 VLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ-- 199
+LSCKV D NG SKGYGFV +E +EAA+ AI +NGM+IN KQV+VG+FV R+ER +
Sbjct: 159 ILSCKVVTDENG-SKGYGFVHYETQEAAETAIAKVNGMVINGKQVFVGIFVPRKERVELG 217
Query: 200 QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPD 258
+ V+ KFTNV+V NL E TD L +F FG ITS ++MK S D KS+ FGFV ++ +
Sbjct: 218 EGVT-KFTNVFVKNLPEDTTDAALNDMFSKFGKITSVVIMKSSDDDKSKGFGFVCYEKVE 276
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
A AAV LNGT K +V RAQK+AEREA+L+ +++ R+ R K +G NLY+KNLD
Sbjct: 277 DAQAAVNALNGTELAGKTLFVARAQKKAEREAELKQRYDALRLERINKYQGINLYVKNLD 336
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR- 377
D+I+++K++ F+ FGTITS K+M D+ G S+G GF FS EEAT+A+ EMNG+ I
Sbjct: 337 DAIDEDKIRTEFAPFGTITSVKIMRDEKGKSRGFGFICFSSAEEATKAVTEMNGQTIQGF 396
Query: 378 -KPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAP---RLGPQQLYYG 433
KPLYVA+AQR E+R+A+L A FAQ R G M +G G G P GPQ Y G
Sbjct: 397 PKPLYVALAQRAEDRRAQLAAHFAQQR--GNMGGRMAG--GVIAGMPPQYMAGPQMFYAG 452
Query: 434 QGTPGLMPPQAAGYGFQQQV-----FP---------GLRPG-GPNYIMPYHLQRQVHPGQ 478
PQ G + Q V +P G RPG GP +P + RQ
Sbjct: 453 V-------PQNRGMVYPQNVMRRGAWPANVPVGVAAGARPGFGPFMAVPQGVPRQAGNNS 505
Query: 479 RTGVR--RSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPV 536
R G R R+G + Q + Q + ++ S P
Sbjct: 506 RGGNRAPRAGAPGMINQQFPQQQQPQQPQQPQQQQSLRAGQAASGAPRQQGAQQGAGARQ 565
Query: 537 ETPR---------PVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
P+ P P + L+ + R+LGE L+PL+ + A K+TGM
Sbjct: 566 AIPKTAGRQGASATAPAPSDERLANLSQFDLATQKRVLGETLFPLIAATQADLAGKITGM 625
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARS 624
LLEMD TE+LHLI P+AL KV EA+ VLQ A++
Sbjct: 626 LLEMDNTELLHLISVPDALAEKVQEAVTVLQTHGAQN 662
>gi|82802753|gb|ABB92427.1| PABP3 [Gorilla gorilla]
Length = 630
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 281/640 (43%), Positives = 385/640 (60%), Gaps = 55/640 (8%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R S YAYVN+ +P+DA +
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEH 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A +NF I GKP+RIM+S RDPS+RK G GN+F+KNLD SI+NKAL DT +AFG +LS
Sbjct: 68 ALHTMNFDVIKGKPLRIMWSQRDPSLRKRGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGQFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +F NVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ---ERISRYEKLKGANLYLKNLDD 319
AV+++NG N K YVGRAQK+ ER+ +L+ FEQ +RI+RY+ + NLY+KNLDD
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVV---NLYVKNLDD 303
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
I+DE+L + FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KP
Sbjct: 304 GIDDERLWKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362
Query: 380 LYVAVAQRKEERKARLQAQFAQ----IRA-PGGMSP----LASGIPGYHHGAPRLGPQQL 430
LYVA+AQRKEER+A L ++ Q +RA P +P + +P + A P Q+
Sbjct: 363 LYVALAQRKEERQAYLTNEYMQRTASVRAVPNQRAPPSGYFMAAVPQTQNHAAYYPPSQV 422
Query: 431 YYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVH---PGQRTGVRRSGN 487
+ +P A + FQ + +RPG P +P+ R P + R +
Sbjct: 423 AQLRPSPRWTAQGARPHPFQNKP-SAIRPGAPR--VPFSTMRPASSQVPRVMSTQRVANT 479
Query: 488 THQMQQPQ----FMRNSNQGIR------YLDNARNGTD----QSVVSMVPVPFEVSGMPA 533
+ Q P+ + +R Y RN Q V+M V G
Sbjct: 480 STQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQGQ-- 537
Query: 534 TPVETPRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMD 592
TLT S LASA P + +MLGE+L+PL++ + P A K+TGMLLE+D
Sbjct: 538 -------------ETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEID 584
Query: 593 QTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGS 632
+E+L+++ESPE+L++K EA+AVLQ A+ + + S
Sbjct: 585 NSELLYMLESPESLRSKADEAVAVLQAHEAKEATEKAVNS 624
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 171/299 (57%), Gaps = 18/299 (6%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID--SNGQSKGYGFVQFE 164
+PS ++++ +L + L + F+ G +LS +V D + G S Y +V F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRG-SSNYAYVNFQ 60
Query: 165 NEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLK 224
+ + A++A+ +N +I K + + R ++ V N++V NL +++ ++ L
Sbjct: 61 HPKDAEHALHTMNFDVIKGKPLRIMWSQRDPSLRKRGVG----NIFVKNLDKSINNKALY 116
Query: 225 KIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQK 284
FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VG+ +
Sbjct: 117 DTVSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGQFKS 175
Query: 285 RAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
R EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM D
Sbjct: 176 RKEREAELGARAKE----------FPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD 225
Query: 345 QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ F Q++
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284
>gi|82802749|gb|ABB92425.1| PABP3 [Homo sapiens]
Length = 630
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 279/642 (43%), Positives = 386/642 (60%), Gaps = 59/642 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+R+CRD S YAYVN+ + +DA +
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEH 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+F+KNLD SI+NKAL DT +AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
C V D NG SKGYGFV FE EAA+ AIK +NGML+N ++V+VG F R+ER +
Sbjct: 128 CNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +F NVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ---ERISRYEKLKGANLYLKNLDD 319
AV+++NG N K YVGRAQK+ ER+ +L+ FEQ +RI+RY+ + NLY+KNLDD
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVV---NLYVKNLDD 303
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KP
Sbjct: 304 GIDDERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362
Query: 380 LYVAVAQRKEERKARLQAQFAQ----IRA-PGGMSP----LASGIPGYHHGAPRLGPQQL 430
LYVA+AQRKEER+A L ++ Q +RA P +P + +P + A P Q+
Sbjct: 363 LYVALAQRKEERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVPQTQNHAAYYPPSQI 422
Query: 431 YYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVH---PGQRTGVRRSGN 487
+ +P A + FQ + +RPG P +P+ R P + R +
Sbjct: 423 ARLRPSPRWTAQGARPHPFQNKP-SAIRPGAPR--VPFSTMRPASSQVPRVMSTQRVANT 479
Query: 488 THQMQQPQFMRNSNQ----------------GIRYLDNARNGTDQSVVSMVPVPFEVSGM 531
+ Q P+ + G+R RN Q V+M + V G
Sbjct: 480 STQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNPQQHRNAQPQ--VTMQQLAVHVQGQ 537
Query: 532 PATPVETPRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLE 590
TLT S LASA P + +MLGE+L+PL++ + P A K+TGMLLE
Sbjct: 538 ---------------ETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLE 582
Query: 591 MDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGS 632
+D +E+L+++ESPE+L++KV EA+AVLQ A+ + + S
Sbjct: 583 IDNSELLYMLESPESLRSKVDEAVAVLQAHQAKEATQKAVNS 624
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 170/299 (56%), Gaps = 18/299 (6%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID--SNGQSKGYGFVQFE 164
+PS ++++ +L + L + F+ G +LS ++ D ++G S Y +V F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSG-SSNYAYVNFQ 60
Query: 165 NEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLK 224
+ + A++A+ +N +I K V + R + V N++V NL +++ ++ L
Sbjct: 61 HTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFVKNLDKSINNKALY 116
Query: 225 KIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQK 284
FG I S V+ D +G S+ +GFV+F++ +AA A++K+NG N + +VG+ +
Sbjct: 117 DTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKS 175
Query: 285 RAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
R EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM D
Sbjct: 176 RKEREAELGARAKE----------FPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD 225
Query: 345 QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ F Q++
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284
>gi|355563109|gb|EHH19671.1| Polyadenylate-binding protein 1-like protein [Macaca mulatta]
Length = 614
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 269/608 (44%), Positives = 376/608 (61%), Gaps = 24/608 (3%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SGY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 6 SGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF + G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +
Sbjct: 66 ERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNI 125
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKV D +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F R+ER +
Sbjct: 126 LSCKVVCDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAELG 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +FTN+YV NL V ++ L+ +F FG + S VM+D+ G SRCFGFVNF+ + A
Sbjct: 185 ARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEA 244
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
AV +NG + ++ Y GRAQKR ER+ +L+ +FEQ + R + +G NLY+KNLDDS
Sbjct: 245 QKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDS 304
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
I+D+KL++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG+++G KPL
Sbjct: 305 IDDDKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 363
Query: 381 YVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPG--------YHHGAPRLGPQQLYY 432
YVA+AQRKEERKA L Q+ Q + M L++ + G + P+ Q YY
Sbjct: 364 YVALAQRKEERKAILTNQYMQRLS--TMRTLSNPLLGSFQQPSSYFLPAVPQPPAQAAYY 421
Query: 433 GQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ 492
G G + P Q A Q P +MP + + VR++
Sbjct: 422 GCGP--VTPTQPAPRWTSQPPRPSCASMVRPPVMPRRPPAHI-----SSVRQASTQVPRM 474
Query: 493 QPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVP-ISTLTS 551
P R +N G + G ++P + V+ P V +P LT+
Sbjct: 475 VPHTQRVANIGTQTTGPGGVGCCTPGRPLLPYKCSSAAHNTYRVQEP-AVHIPGQEPLTA 533
Query: 552 ALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
++ +A+P ++ +M+GE+LYPL+ ++ A K+TGMLLE+D +E+L ++ESPE+L K+
Sbjct: 534 SMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKI 593
Query: 611 AEAMAVLQ 618
EA+AVLQ
Sbjct: 594 DEAVAVLQ 601
>gi|11610605|gb|AAG38953.1|AF132026_1 testis-specific poly(A)-binding protein [Homo sapiens]
Length = 631
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 283/649 (43%), Positives = 392/649 (60%), Gaps = 64/649 (9%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
+ PS Y SLYVGDL +V E+ LY+ FS ++S+R+CRD S YAYVN+ +
Sbjct: 4 STPS-YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHT 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
+DA +A + +NF I GKP+RIM+S RDPS+RKSG GN+F+KNLD SI+NKAL DT +AF
Sbjct: 63 KDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSC V D NG SKGYGFV FE EAA+ AIK +NGML+N ++V+VG F R+ER
Sbjct: 123 GNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +F NVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+
Sbjct: 182 ELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ---ERISRYEKLKGANLYL 314
+ A AV+++NG N K YVGRAQK+ ER+ +L+ FEQ +RI+RY+ + NLY+
Sbjct: 242 EDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVV---NLYV 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDGIDDERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ----IRA-PGGMSP----LASGIPGYHHGAPRL 425
+ KPLYVA+AQRKEER+A L ++ Q +RA P +P + +P + A
Sbjct: 358 VATKPLYVALAQRKEERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVPQTQNHAAYY 417
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQR-------QVHPGQ 478
P Q+ + +P A + FQ + +RPG P +P+ R +V Q
Sbjct: 418 PPSQIARLRPSPRWTAQGARPHPFQNKP-SAIRPGAPR--VPFSTMRPASSQVPRVMSTQ 474
Query: 479 R---TGVRRSGNTHQMQQ-----------PQFMRNSNQGIRYLDNARNGTDQSVVSMVPV 524
R T + G + P++ + G+R RN Q V+M +
Sbjct: 475 RVANTSTQTVGPRPAAARAAAATPAVRTVPRYKYAA--GVRNPQQHRNAQPQ--VTMQQL 530
Query: 525 PFEVSGMPATPVETPRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASK 583
V G TLT S LASA P + +MLGE+L+PL++ + P A K
Sbjct: 531 AVHVQGQ---------------ETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGK 575
Query: 584 VTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGS 632
+TGMLLE+D +E+L+++ESPE+L++KV EA+AVLQ A+ + + S
Sbjct: 576 ITGMLLEIDNSELLYMLESPESLRSKVDEAVAVLQAHQAKEATQKAVNS 624
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 170/299 (56%), Gaps = 18/299 (6%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID--SNGQSKGYGFVQFE 164
+PS ++++ +L + L + F+ G +LS ++ D ++G S Y +V F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSG-SSNYAYVNFQ 60
Query: 165 NEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLK 224
+ + A++A+ +N +I K V + R + V N++V NL +++ ++ L
Sbjct: 61 HTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFVKNLDKSINNKALY 116
Query: 225 KIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQK 284
FG I S V+ D +G S+ +GFV+F++ +AA A++K+NG N + +VG+ +
Sbjct: 117 DTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKS 175
Query: 285 RAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
R EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM D
Sbjct: 176 RKEREAELGARAKE----------FPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD 225
Query: 345 QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ F Q++
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284
>gi|402901594|ref|XP_003913731.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 636
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 276/626 (44%), Positives = 380/626 (60%), Gaps = 50/626 (7%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS+ ++S+RVCRD R S YAYVN+ +P+DA +
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAEH 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+R+SG GN+F+KNLD SI+NK L DT +AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER-AQQNVS 203
CKV D NG SKGYGFV FE EAA+ AI+ +NG L+ND++V+VG F R+ER A+
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 204 PK-FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
K F NVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 VKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + + NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKE+R+A L ++ Q +RA P G + +P + A
Sbjct: 366 ALAQRKEDRQAHLTNEYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAVPQTQNRAAYY 423
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVHPGQRTGVRR 484
P Q+ + +P A + FQ + PG +RP P +P+ R
Sbjct: 424 PPSQIAQLRPSPCWTAQGARPHPFQNK--PGAIRPAAPR--VPFSTMRPT---------- 469
Query: 485 SGNTHQMQQPQFMRN-SNQGIRYLDNARNGTDQSVVSMVPVPFEVSGM----------PA 533
S ++ Q++ N S Q + A V VP G+ P
Sbjct: 470 SSQVPRVMSTQYVANTSTQAVGPRPAAAAAAATPAVRSVPRYKYAEGVCNPQQHLNAQPQ 529
Query: 534 TPVETPRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMD 592
++ P TLT S LASA P ++ +MLGE+L+P ++ + P A K+TGMLLE+D
Sbjct: 530 VTMQQPAVHVQGQKTLTASMLASAPPQEQKQMLGERLFPPIQAMHPTLAGKITGMLLEID 589
Query: 593 QTEVLHLIESPEALKTKVAEAMAVLQ 618
+E+LH++ESP++L++KV EA+AVLQ
Sbjct: 590 NSELLHMLESPQSLRSKVDEAVAVLQ 615
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 171/298 (57%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S Y +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQH 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
+ A++A+ +N +I K V + R + V N++V NL +++ ++ L
Sbjct: 62 PKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVG----NIFVKNLDKSINNKVLYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NGT ND+ +VGR + R
Sbjct: 118 TVSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L AK ++ N+Y+KN + ++DE+LK+LF +FG S KVM D+
Sbjct: 177 KEREAELGAKVKE----------FPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|340375830|ref|XP_003386437.1| PREDICTED: polyadenylate-binding protein 1-like [Amphimedon
queenslandica]
Length = 618
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 270/599 (45%), Positives = 368/599 (61%), Gaps = 29/599 (4%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +VNE+ L++ FS+ V+S+RVCRD + SLGYAYVN+ P DA A +
Sbjct: 16 SLYVGDLLPDVNEAVLFEQFSKAGPVLSIRVCRDLITKRSLGYAYVNFQQPADAERALDT 75
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+N+ PI G+P RIM+S RDPS+R+SG GN+FIKNLD SID+KAL DTF+AFG +LSCKVA
Sbjct: 76 MNYEPIKGQPCRIMWSQRDPSLRRSGVGNIFIKNLDKSIDHKALYDTFSAFGNILSCKVA 135
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQN-VSPKFT 207
D N SKG+GFV F+ +EAA AI+ +NG L+ND +VYVG F+ R++R+ N + +T
Sbjct: 136 TDGNRHSKGFGFVHFDEQEAADLAIEKVNGKLLNDMKVYVGKFIPRKDRSHTNGFNQHYT 195
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NV++ N E TD L +F +G+I SA+VMKD +G S+ FGFV+F+S +AA+AAV+ +
Sbjct: 196 NVFIKNFGEDFTDTMLYDVFEKYGSIVSAVVMKDGEGLSKGFGFVSFESHEAASAAVQAV 255
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
+ + N + Y GRAQK+ ER +L + E++R R + +G NLY+KNL+D++ +EKLK
Sbjct: 256 HNSIVNGRQVYCGRAQKKNERSRELMRRKEEQRQERLSRYQGVNLYIKNLEDTLGEEKLK 315
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
FS+FG+ITS K+M D+ G SKG GF FS PEEAT+A+ EMNG+++ KPLYVA+AQR
Sbjct: 316 SEFSKFGSITSAKIMTDEFGHSKGFGFVCFSSPEEATKAVTEMNGRIVVSKPLYVALAQR 375
Query: 388 KEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGL------MP 441
KEER+A L AQ M +A GIP G Q+Y PG+
Sbjct: 376 KEERQAHLAAQ--------RMQRIARGIPQ--------GQMQMYPPYYMPGIQNQRPFFT 419
Query: 442 PQAAGYGFQ-QQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNS 500
AAGY + Q P RP Y M +H R P G +M PQ R +
Sbjct: 420 AMAAGYTARPWQGGPMHRPFSGGYNM-HHRTRANVPRPSVGGAGGAGGQRMNTPQTQRIA 478
Query: 501 NQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDD 560
Q G Q+ + G P P P+STL+ P
Sbjct: 479 PQQRLNPQGRPGGVQQTKLQFSAGARNQPGGPMGGGMDLGQDPEPLSTLS----QTDPMK 534
Query: 561 RTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
R +++GE LY + P A K+TGMLLEMD +E+LH++E+PE+L +KV EA+ VL+E
Sbjct: 535 RKQIIGEHLYRAISASHPDKAGKITGMLLEMDNSELLHMLEAPESLNSKVEEAVNVLRE 593
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y V+LY+ +LE + E +L FS+ + S ++ D+ S G+ +V +S+P++A
Sbjct: 293 SRYQGVNLYIKNLEDTLGEEKLKSEFSKFGSITSAKIMTDEFGHSK-GFGFVCFSSPEEA 351
Query: 83 ANAKEALNFMPINGKPIRIMYSHR 106
A +N + KP+ + + R
Sbjct: 352 TKAVTEMNGRIVVSKPLYVALAQR 375
>gi|45238849|ref|NP_112241.2| polyadenylate-binding protein 3 [Homo sapiens]
gi|28201852|sp|Q9H361.2|PABP3_HUMAN RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3; AltName:
Full=Testis-specific poly(A)-binding protein
gi|20379668|gb|AAH27617.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|119628765|gb|EAX08360.1| poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|123982576|gb|ABM83029.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|123997243|gb|ABM86223.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|189055351|dbj|BAG36140.1| unnamed protein product [Homo sapiens]
Length = 631
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 279/642 (43%), Positives = 386/642 (60%), Gaps = 59/642 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+R+CRD S YAYVN+ + +DA +
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEH 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+F+KNLD SI+NKAL DT +AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
C V D NG SKGYGFV FE EAA+ AIK +NGML+N ++V+VG F R+ER +
Sbjct: 128 CNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +F NVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ---ERISRYEKLKGANLYLKNLDD 319
AV+++NG N K YVGRAQK+ ER+ +L+ FEQ +RI+RY+ + NLY+KNLDD
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVV---NLYVKNLDD 303
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KP
Sbjct: 304 GIDDERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362
Query: 380 LYVAVAQRKEERKARLQAQFAQ----IRA-PGGMSP----LASGIPGYHHGAPRLGPQQL 430
LYVA+AQRKEER+A L ++ Q +RA P +P + +P + A P Q+
Sbjct: 363 LYVALAQRKEERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVPQTQNHAAYYPPSQI 422
Query: 431 YYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVH---PGQRTGVRRSGN 487
+ +P A + FQ + +RPG P +P+ R P + R +
Sbjct: 423 ARLRPSPRWTAQGARPHPFQNKP-SAIRPGAPR--VPFSTMRPASSQVPRVMSTQRVANT 479
Query: 488 THQMQQPQFMRNSNQ----------------GIRYLDNARNGTDQSVVSMVPVPFEVSGM 531
+ Q P+ + G+R RN Q V+M + V G
Sbjct: 480 STQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNPQQHRNAQPQ--VTMQQLAVHVQGQ 537
Query: 532 PATPVETPRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLE 590
TLT S LASA P + +MLGE+L+PL++ + P A K+TGMLLE
Sbjct: 538 ---------------ETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLE 582
Query: 591 MDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGS 632
+D +E+L+++ESPE+L++KV EA+AVLQ A+ + + S
Sbjct: 583 IDNSELLYMLESPESLRSKVDEAVAVLQAHQAKEATQKAVNS 624
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 170/299 (56%), Gaps = 18/299 (6%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID--SNGQSKGYGFVQFE 164
+PS ++++ +L + L + F+ G +LS ++ D ++G S Y +V F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSG-SSNYAYVNFQ 60
Query: 165 NEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLK 224
+ + A++A+ +N +I K V + R + V N++V NL +++ ++ L
Sbjct: 61 HTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFVKNLDKSINNKALY 116
Query: 225 KIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQK 284
FG I S V+ D +G S+ +GFV+F++ +AA A++K+NG N + +VG+ +
Sbjct: 117 DTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKS 175
Query: 285 RAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
R EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM D
Sbjct: 176 RKEREAELGARAKE----------FPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD 225
Query: 345 QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ F Q++
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284
>gi|148539604|ref|NP_001091917.1| polyA-binding protein [Strongylocentrotus purpuratus]
gi|126722149|emb|CAM57104.1| polyA-binding protein [Strongylocentrotus purpuratus]
Length = 640
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 288/625 (46%), Positives = 378/625 (60%), Gaps = 51/625 (8%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V E+ L++ FS ++S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 12 SLYVGDLHADVTEALLFEKFSTAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF + G+PIRIM+S RDPS+RKSG GNVFIKNLD SIDNKA+ DTF+AFG +LSCKV
Sbjct: 72 MNFDTLKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGHILSCKVV 131
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D NG +KGYGFV FE +EAA AI+ +NGML+N K+VYVG F+ R+ER Q + +F
Sbjct: 132 TDENGVNKGYGFVHFETQEAANKAIEKVNGMLLNGKKVYVGYFIPRKERLMQMGDHQKQF 191
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNV++ NLAE V D L + G +G+I SA +M D D KS+ FGF++F+ +AA V+
Sbjct: 192 TNVFIKNLAEDVDDGKLAEFGGQYGSILSAKIMFD-DSKSKGFGFISFEDHEAANDFVKT 250
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDDSIND 323
+NG+ N + Y GRAQK+AER A+L+A+FE QER +RY+ G NLY+KNLDD I+D
Sbjct: 251 INGSEVNGRTLYAGRAQKKAERAAELKARFEALKQERSTRYQ---GVNLYIKNLDDEIDD 307
Query: 324 EKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVA 383
E+L++ FS +GTITS KVM D SKG GF FS PEEAT+A+ EMNG+++ KPLYVA
Sbjct: 308 ERLRKEFSRYGTITSAKVMSDDKANSKGFGFVCFSSPEEATKAVTEMNGRILVAKPLYVA 367
Query: 384 VAQRKEERKARLQAQFAQIRAP-------GGMSPLASGIP--GYHHGAPRLGPQQLY-YG 433
+AQRK+ER+A+L +Q+ Q AP P+ P YH+ A + ++ G
Sbjct: 368 LAQRKDERRAQLASQYMQRVAPQVRVGQQASQQPVNPVYPTMAYHYAAMPQAQRNIFPAG 427
Query: 434 QGTPGLMP-----PQAAGYGFQQ--QVFPGL---RPGGPNYIMPYHLQRQVHPGQRTGVR 483
Q P PQ A Q Q PG + G P RQ P R V+
Sbjct: 428 QLAQVRHPRWSQQPQQARTAAQPNFQTIPGAAGRQFGAPRAGTATGQVRQPMPATRVPVQ 487
Query: 484 RSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVP-FEV--SGMPA-TPVETP 539
+ P R G R G + + P F V GMP P E
Sbjct: 488 AA--------PAGQRVGGMGAPTQQQMRLGAGAQLSAAKQYPKFAVPRQGMPGQMPAEN- 538
Query: 540 RPVPVPI------STLTSA-LASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMD 592
VPV LTSA LASA P ++ +MLGE+L+ ++ A K+TGMLLE+D
Sbjct: 539 --VPVQALHVPGQEPLTSAMLASALPQEQKQMLGERLFSIISETHKDLAGKITGMLLEID 596
Query: 593 QTEVLHLIESPEALKTKVAEAMAVL 617
+E+LH++E EAL+ KV EA+ VL
Sbjct: 597 NSELLHMLEVQEALEKKVEEAVQVL 621
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LY+ +L+ +++ +L FS+ + S +V D K +S G+ +V +S+P++A
Sbjct: 291 YQGVNLYIKNLDDEIDDERLRKEFSRYGTITSAKVMSD-DKANSKGFGFVCFSSPEEATK 349
Query: 85 AKEALNFMPINGKPIRIMYSHR 106
A +N + KP+ + + R
Sbjct: 350 AVTEMNGRILVAKPLYVALAQR 371
>gi|57997079|emb|CAB66834.2| hypothetical protein [Homo sapiens]
Length = 631
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 280/642 (43%), Positives = 385/642 (59%), Gaps = 59/642 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+R+CRD S YAYVN+ + +DA +
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEH 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+F+KNLD SI+NKAL DT +AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
C V D NG SKGYGFV FE EAA+ AIK +NGML+N ++V+VG F R+ER +
Sbjct: 128 CNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +F NVY+ N E + DE LK +FG FG S +M D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVELMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ---ERISRYEKLKGANLYLKNLDD 319
AV+++NG N K YVGRAQK+ ER+ +L+ FEQ +RI+RY+ + NLY+KNLDD
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVV---NLYVKNLDD 303
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KP
Sbjct: 304 GIDDERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362
Query: 380 LYVAVAQRKEERKARLQAQFAQ----IRA-PGGMSP----LASGIPGYHHGAPRLGPQQL 430
LYVA+AQRKEER+A L ++ Q +RA P +P + +P + A P Q+
Sbjct: 363 LYVALAQRKEERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVPQTQNHAAYYPPSQI 422
Query: 431 YYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQR-------QVHPGQRT--- 480
+ +P A + FQ + +RPG P +P+ R +V QR
Sbjct: 423 ARLRPSPRWTAQGARPHPFQNKP-SAIRPGAPR--VPFSTMRPASSQVPRVMSTQRVANT 479
Query: 481 -----GVRRSGNTHQMQQPQFMR----NSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGM 531
G R + P G+R RN Q V+M + V G
Sbjct: 480 STQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNPQQHRNAQPQ--VTMQQLAVHVQGQ 537
Query: 532 PATPVETPRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLE 590
TLT S LASA P + +MLGE+L+PL++ + P A K+TGMLLE
Sbjct: 538 ---------------ETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLE 582
Query: 591 MDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGS 632
+D +E+L+++ESPE+L++KV EA+AVLQ A+ + + S
Sbjct: 583 IDNSELLYMLESPESLRSKVDEAVAVLQAHQAKEATQKAVNS 624
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 170/299 (56%), Gaps = 18/299 (6%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID--SNGQSKGYGFVQFE 164
+PS ++++ +L + L + F+ G +LS ++ D ++G S Y +V F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSG-SSNYAYVNFQ 60
Query: 165 NEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLK 224
+ + A++A+ +N +I K V + R + V N++V NL +++ ++ L
Sbjct: 61 HTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFVKNLDKSINNKALY 116
Query: 225 KIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQK 284
FG I S V+ D +G S+ +GFV+F++ +AA A++K+NG N + +VG+ +
Sbjct: 117 DTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKS 175
Query: 285 RAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
R EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S ++M D
Sbjct: 176 RKEREAELGARAKE----------FPNVYIKNFGEDMDDERLKDLFGKFGPALSVELMTD 225
Query: 345 QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ F Q++
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284
>gi|406698471|gb|EKD01707.1| polyadenylate-binding protein [Trichosporon asahii var. asahii CBS
8904]
Length = 686
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 288/654 (44%), Positives = 371/654 (56%), Gaps = 86/654 (13%)
Query: 6 AAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSK 65
A A A TS T P + SLYVG+L+ +V E+ L+++F+ V V S+RVCRD
Sbjct: 37 AKPAQPAPTSTTGQQQPGN--SASLYVGELDPSVTEAMLFEIFNMVGPVASIRVCRDAVT 94
Query: 66 RSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDT 125
R SLGYAYVNY N D A E LN+ I +P RIM+S RDP++RK+G GN+FIKNLD
Sbjct: 95 RRSLGYAYVNYLNAADGERALEHLNYSLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDD 154
Query: 126 SIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQ 185
IDNKAL DTFAAFG +LSCKVA D NG S+G+ FV +E EAA AIK +NGML+NDK+
Sbjct: 155 KIDNKALHDTFAAFGNILSCKVATDENGNSRGFAFVHYETGEAADAAIKSVNGMLLNDKK 214
Query: 186 VYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
VYVG + ++ER + KFTN+++ NL T +DL+ +F FG I SA + D
Sbjct: 215 VYVGHHISKKERQSKVEEQRAKFTNIFIKNLEPEFTQKDLEDMFKPFGEIVSAALSVGED 274
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
G S+ F FVN+ + DAA AV++LN N K YVGRAQKRAER+ +LR E+ R+
Sbjct: 275 GLSKGFAFVNYTTHDAAKKAVDELNDKEINGKKLYVGRAQKRAERDEELRRMHEERRLEN 334
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEA 363
K G NLY+KN+DD +D++L+ F GTITS KVM D G S+G GF FS P+EA
Sbjct: 335 ESKTAGVNLYVKNIDDEWDDDRLRSEFDFAGTITSAKVMRDDKGASRGFGFVCFSQPDEA 394
Query: 364 TRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ--------------------IR 403
TRA+ EMNGKMIG KPLYV++AQ+KE R+ L++Q Q ++
Sbjct: 395 TRAVQEMNGKMIGTKPLYVSLAQKKEVRRQALESQMQQRNAQRLQYAAANGLGGPQGYMQ 454
Query: 404 AP----------GGMSPLASGIPGYHHGAPRLGPQQLYY---GQ-GTP---GLMPPQAAG 446
AP G M P+ G+ GY P +G + Y GQ G P G MPP AG
Sbjct: 455 APMYYPPMGPYGGPMMPVRGGVVGYPGAPPMMGARPGRYPPSGQPGAPVPMGYMPPGGAG 514
Query: 447 YGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRY 506
G PG PNY VR +GN + P R
Sbjct: 515 ---------GNYPGMPNYP----------------VRPAGNA---RPPTAARP------- 539
Query: 507 LDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTS-ALASASPDDRTRML 565
NG+ +P +PA P LT+ ALA ASP ++ +ML
Sbjct: 540 -----NGSPSGAQQGLPR----GQVPARPQGDGAQAAAGQPRLTAQALARASPGEQKQML 590
Query: 566 GEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
GE +YPL+ +P A K+TGMLLEMD E+LHL+ESP AL KV EA+ VL++
Sbjct: 591 GEAIYPLIHESQPELAGKITGMLLEMDNAELLHLVESPAALTEKVDEALRVLED 644
>gi|449281934|gb|EMC88877.1| Embryonic polyadenylate-binding protein [Columba livia]
Length = 646
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 289/646 (44%), Positives = 383/646 (59%), Gaps = 75/646 (11%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
GY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 7 GYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPVDAE 66
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A + +NF I G+PIRIM+S RDP +RKSG GNVFIKNLD SIDNKAL DTF+AFG +L
Sbjct: 67 RALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGNIL 126
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--N 201
SCKV D NG S+GYGFV FE EAA AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 127 SCKVVCDENG-SRGYGFVHFETHEAATRAIETMNGMLLNDRKVFVGHFKSRKEREAEFGA 185
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNF------- 254
+ +FTNVY+ N + + D+ L++IF FG S VM DS G+S+ FGFVNF
Sbjct: 186 KAMEFTNVYIKNFGDDMDDDRLREIFSKFGKTLSVKVMMDSTGRSKGFGFVNFEKHEEAQ 245
Query: 255 ---------QSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERIS 302
Q P AV +NG N ++ YVGRAQKR ER+++L+ KFE QER+S
Sbjct: 246 KARGSSCCAQRPPLRWQAVADMNGKEINGRIVYVGRAQKRLERQSELKRKFEQIKQERVS 305
Query: 303 RYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEE 362
RY+ G NLY+KNLDD I+D++L++ FS +GTITS KVM + G SKG GF FS PEE
Sbjct: 306 RYQ---GVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTE-GGHSKGFGFVCFSSPEE 361
Query: 363 ATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGA 422
AT+A+ EMNG+++ KPLYVA+AQRKEERKA L Q+ Q A +PG
Sbjct: 362 ATKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQYMQRLA------TLRALPG----- 410
Query: 423 PRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGG-----PNYIMPYHLQRQVHPG 477
P LG Q G P + PQ + +RP P+ P + R P
Sbjct: 411 PLLGSFQPPPGYFLPPIPQPQTRATFYSPSPVVPVRPATRWSAQPSRPPPTPILRAAVPP 470
Query: 478 QR-----TGVRRSGNTHQMQQPQFMRNSNQGI--------------------RYLDNARN 512
+R + +R++ PQ R +N G +Y + RN
Sbjct: 471 RRLLTNISTMRQASTQVPRVPPQAQRVANIGTQTVSARVPSSPTLPRGTPQYKYSSSVRN 530
Query: 513 GTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPL 572
Q + M PV G PA V+ P+ S LA+A P ++ +M+GE+LYPL
Sbjct: 531 --VQPMGHMPPVVAPQVGEPAVHVQGQEPL------TASVLAAAPPQEQKQMIGERLYPL 582
Query: 573 VENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
+ I P A K+TGMLLE+D +E+L L+ESP++L++K+ EA+AVLQ
Sbjct: 583 IYAIHPSLAGKITGMLLEIDNSELLLLLESPDSLRSKMEEAVAVLQ 628
>gi|401886540|gb|EJT50568.1| polyadenylate-binding protein [Trichosporon asahii var. asahii CBS
2479]
Length = 686
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 288/654 (44%), Positives = 371/654 (56%), Gaps = 86/654 (13%)
Query: 6 AAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSK 65
A A A TS T P + SLYVG+L+ +V E+ L+++F+ V V S+RVCRD
Sbjct: 37 AKPAQPAPTSTTGQQQPGN--SASLYVGELDPSVTEAMLFEIFNMVGPVASIRVCRDAVT 94
Query: 66 RSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDT 125
R SLGYAYVNY N D A E LN+ I +P RIM+S RDP++RK+G GN+FIKNLD
Sbjct: 95 RRSLGYAYVNYLNAADGERALEHLNYSLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDD 154
Query: 126 SIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQ 185
IDNKAL DTFAAFG +LSCKVA D NG S+G+ FV +E EAA AIK +NGML+NDK+
Sbjct: 155 KIDNKALHDTFAAFGNILSCKVATDENGNSRGFAFVHYETGEAADAAIKSVNGMLLNDKK 214
Query: 186 VYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
VYVG + ++ER + KFTN+++ NL T +DL+ +F FG I SA + D
Sbjct: 215 VYVGHHISKKERQSKVEEQRAKFTNIFIKNLEPEFTQKDLEDMFKPFGEIVSAALSVGED 274
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
G S+ F FVN+ + DAA AV++LN N K YVGRAQKRAER+ +LR E+ R+
Sbjct: 275 GLSKGFAFVNYTTHDAAKKAVDELNDKEINGKKLYVGRAQKRAERDEELRRMHEERRLEN 334
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEA 363
K G NLY+KN+DD +D++L+ F GTITS KVM D G S+G GF FS P+EA
Sbjct: 335 ESKTAGVNLYVKNIDDEWDDDRLRSEFDFAGTITSAKVMRDDKGASRGFGFVCFSQPDEA 394
Query: 364 TRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ--------------------IR 403
TRA+ EMNGKMIG KPLYV++AQ+KE R+ L++Q Q ++
Sbjct: 395 TRAVQEMNGKMIGTKPLYVSLAQKKEVRRQALESQMQQRNAQRLQYAAANGLGGPQGYMQ 454
Query: 404 AP----------GGMSPLASGIPGYHHGAPRLGPQQLYY---GQ-GTP---GLMPPQAAG 446
AP G M P+ G+ GY P +G + Y GQ G P G MPP AG
Sbjct: 455 APMYYPPMGPYGGPMMPVRGGVVGYPGAPPMMGARPGRYPPSGQPGAPVPMGYMPPGGAG 514
Query: 447 YGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRY 506
G PG PNY VR +GN + P R
Sbjct: 515 ---------GNYPGMPNYP----------------VRPAGNA---RPPTAARP------- 539
Query: 507 LDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTS-ALASASPDDRTRML 565
NG+ +P +PA P LT+ ALA ASP ++ +ML
Sbjct: 540 -----NGSPSGAQQGLP----RGQVPARPQGDGAQAAAGQPRLTAQALARASPGEQRQML 590
Query: 566 GEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
GE +YPL+ +P A K+TGMLLEMD E+LHL+ESP AL KV EA+ VL++
Sbjct: 591 GEAIYPLIHESQPELAGKITGMLLEMDNAELLHLVESPAALTEKVDEALRVLED 644
>gi|426200105|gb|EKV50029.1| hypothetical protein AGABI2DRAFT_190442 [Agaricus bisporus var.
bisporus H97]
Length = 673
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 272/636 (42%), Positives = 370/636 (58%), Gaps = 54/636 (8%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ V E+ L+++F+ + V S+RVCRD R SLGYAYVNY N D A
Sbjct: 41 SASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 100
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I + RIM+S RDP++RK+G GNVFIKNLD +IDNKAL DTF AFG VLSCK
Sbjct: 101 EQLNYSLIKNRACRIMWSQRDPALRKTGQGNVFIKNLDEAIDNKALHDTFVAFGNVLSCK 160
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSP 204
VA D +G+SKGYGFV +E EAA NAIK +NGML+NDK+VYVG + R+ER + +
Sbjct: 161 VATDEHGRSKGYGFVHYETAEAADNAIKSVNGMLLNDKKVYVGHHISRKERQSKLDEMKA 220
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
+FTN+Y+ NL VT E+ ++F +G +TS++V D +GKS+ FGFVN++ + A AV
Sbjct: 221 QFTNLYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDEEGKSKGFGFVNYERHEEAQRAV 280
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
++L+ T K +V RAQK+AERE +LR +EQ ++ + K +G NLY+KNL+D +D+
Sbjct: 281 DELHDTDLKGKKLFVARAQKKAEREDELRRSYEQAKLEKLSKYQGVNLYIKNLEDDFDDD 340
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KL+ F FG ITSCKVM D+ G SKG GF FS P+EAT+A+ EMN KMIG KPLYV++
Sbjct: 341 KLRAEFEPFGAITSCKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSL 400
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYH----------------------HGA 422
AQR+E R+ +L++Q AQ A+G+PG + +G
Sbjct: 401 AQRREVRRQQLESQIAQRNQIRMQQAAAAGVPGGYINGPMYYPPGPGFPPQGRGMMGYGQ 460
Query: 423 PRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVF------------------PGLRPGGPNY 464
P + P ++ Y G MPP YG Q + PG P P+
Sbjct: 461 PGMMPPRIRYPNGQVPSMPPVPGPYGQGPQPYGMPGYPPRGAPRPPVARGPGSSPTHPSV 520
Query: 465 IMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPV 524
MP R P G R PQ ++ A Q +
Sbjct: 521 PMP----RANGPAPNGGAARPA-------PQGAPTGSRAPPPGAPAPGRAPQPAYNKPQA 569
Query: 525 PFEVSGMPATPVETPRPVPVPISTLTS-ALASASPDDRTRMLGEQLYPLVENIEPVHASK 583
+ + + A P P P + LT+ LA+ASP ++ +MLGE +Y + +P A K
Sbjct: 570 RPQGAPVTAQPAAVPAPQQSGLPNLTADQLAAASPMEQKQMLGEVIYMRIVPSQPELAGK 629
Query: 584 VTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
+TGMLLEMD E+L L++S EA+ KV EA VLQE
Sbjct: 630 ITGMLLEMDNNELLALLDSEEAMNAKVQEANTVLQE 665
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y V+LY+ +LE + ++ +L F + S +V RD+ K +S G+ +V +S+P +A
Sbjct: 321 SKYQGVNLYIKNLEDDFDDDKLRAEFEPFGAITSCKVMRDE-KGTSKGFGFVCFSSPDEA 379
Query: 83 ANAKEALNFMPINGKPIRIMYSHR 106
A +N I KP+ + + R
Sbjct: 380 TKAVAEMNNKMIGTKPLYVSLAQR 403
>gi|73909065|gb|AAH45608.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
Length = 631
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 283/644 (43%), Positives = 381/644 (59%), Gaps = 54/644 (8%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
+ PS Y SLYVGDL +V E+ LY+ FS ++S+R+CRD S YAYVN+ +
Sbjct: 4 STPS-YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHT 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
+DA +A + +NF I GKP+RIM+S RDPS+RKSG GN+F+KNLD SI+NKAL DT +AF
Sbjct: 63 KDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSC V D NG SKGYGFV FE EAA+ AIK +NGML+N ++V+VG F R+ER
Sbjct: 123 GNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +F NVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+
Sbjct: 182 ELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AV+++NG N K YVGRAQK+ ER+ +L+ FE Q+RI+RY+ + NLY+
Sbjct: 242 EDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVV---NLYV 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDGIDDERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIP-GY---------HHGA-- 422
+ KPLYVA+AQRKEER+A L ++ Q A P P GY +H A
Sbjct: 358 VATKPLYVALAQRKEERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVTQTQNHAAYY 417
Query: 423 -----PRLGPQQLYYGQGT---PGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQV 474
RL P + QG P P A G + F +RP QR
Sbjct: 418 PPSQIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPRVPFSTMRPASSQVPRVMSTQRVA 477
Query: 475 HPGQRTGVRRSGNTHQMQQPQFMRNSNQ-----GIRYLDNARNGTDQSVVSMVPVPFEVS 529
+ +T R +R + G+R RN Q V+M + V
Sbjct: 478 NTSTQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNPQQHRNAQPQ--VTMQQLAVHVQ 535
Query: 530 GMPATPVETPRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGML 588
G TLT S LASA P + +MLGE+L+PL++ + P A K+TGML
Sbjct: 536 GQ---------------ETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGML 580
Query: 589 LEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGS 632
LE+D +E+L+++ESPE+L++KV EA+AVLQ A+ + + S
Sbjct: 581 LEIDNSELLYMLESPESLRSKVDEAVAVLQAHQAKEATQKAVNS 624
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 170/299 (56%), Gaps = 18/299 (6%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID--SNGQSKGYGFVQFE 164
+PS ++++ +L + L + F+ G +LS ++ D ++G S Y +V F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSG-SSNYAYVNFQ 60
Query: 165 NEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLK 224
+ + A++A+ +N +I K V + R + V N++V NL +++ ++ L
Sbjct: 61 HTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFVKNLDKSINNKALY 116
Query: 225 KIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQK 284
FG I S V+ D +G S+ +GFV+F++ +AA A++K+NG N + +VG+ +
Sbjct: 117 DTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKS 175
Query: 285 RAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
R EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM D
Sbjct: 176 RKEREAELGARAKE----------FPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD 225
Query: 345 QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ F Q++
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMK 284
>gi|384496545|gb|EIE87036.1| hypothetical protein RO3G_11747 [Rhizopus delemar RA 99-880]
Length = 616
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/473 (52%), Positives = 326/473 (68%), Gaps = 27/473 (5%)
Query: 2 EATGAAAATAAVTSATTAAVPSG--YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRV 59
EAT + + A++P+G + SLYVG+L+ +V E+ L+++F+ + V S+RV
Sbjct: 11 EATQLSVEQQQQIAQAQASLPAGAPSPSASLYVGELDPSVTEAMLFEMFNMIGPVASIRV 70
Query: 60 CRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVF 119
CRD R SLGYAYVN+ N D A E+LN+ I GKP RIM+S RDPS+RK+G GNVF
Sbjct: 71 CRDAVTRRSLGYAYVNFHNIVDGERALESLNYTLIKGKPCRIMWSQRDPSLRKTGSGNVF 130
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGM 179
IKNLDTSIDNKAL DTF+AFG +LSCK+A+D +G SKGYGFV +E EEAA NAIK ++GM
Sbjct: 131 IKNLDTSIDNKALHDTFSAFGNILSCKIALDESGNSKGYGFVHYETEEAADNAIKHVDGM 190
Query: 180 LINDKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAI 237
L+NDK+VYVG + R+ER + + KFTNVYV NL E++ DE K++F FG ITSA+
Sbjct: 191 LLNDKKVYVGRHIPRKERQAKIEQIRAKFTNVYVKNLDESINDEQFKEMFSKFGPITSAL 250
Query: 238 VMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
V D +GKS+ FGF+NF++ + A AV+ LN T +N K YV RAQK+ ERE +LR ++E
Sbjct: 251 VQTDEEGKSKGFGFINFENYEDAHKAVDTLNETEHNGKTLYVARAQKKTEREEELRKQYE 310
Query: 298 QERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAF 357
Q ++ + K +G NLY+KNLDD I+DEKL++ FS +G ITS KVM D+ G SKG GF F
Sbjct: 311 QAKLEKLAKYQGVNLYIKNLDDDIDDEKLRQEFSVYGVITSAKVMCDEKGTSKGFGFVCF 370
Query: 358 SMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFA---QIRAPGGMSPLASG 414
S P+EAT+A+ EMNG+MIG KP+YVA+AQRKE R+++L+AQ A Q+R GM P+ G
Sbjct: 371 SSPDEATKAVTEMNGRMIGSKPIYVALAQRKEVRRSQLEAQMAQRNQMRMQQGM-PMP-G 428
Query: 415 IPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMP 467
PGY GAP ++Y PG PQ G + VF PN +MP
Sbjct: 429 APGYMPGAP------MFY--APPGQFMPQ----GQRPTVF------APNNMMP 463
>gi|19114289|ref|NP_593377.1| mRNA export shuttling protein [Schizosaccharomyces pombe 972h-]
gi|3123239|sp|P31209.2|PABP_SCHPO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|2104439|emb|CAB08762.1| mRNA export shuttling protein [Schizosaccharomyces pombe]
Length = 653
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 275/620 (44%), Positives = 372/620 (60%), Gaps = 46/620 (7%)
Query: 10 TAAVTSATTAAVPSGYG--NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRS 67
T+ T+A++ A PSG + SLYVG+L+ +V E+ L++LF+ + V S+RVCRD R
Sbjct: 60 TSTPTNASSVATPSGTAPTSASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRR 119
Query: 68 SLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSI 127
SLGYAYVN+ N +D A + LN+ I G+P RIM+S RDPS+RK G GNVFIKNLD +I
Sbjct: 120 SLGYAYVNFHNMEDGEKALDELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAI 179
Query: 128 DNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVY 187
DNKAL DTF+AFG +LSCKVA+D G +KGYGFV F++ E+A AI+ +NGML+NDK+VY
Sbjct: 180 DNKALHDTFSAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVY 239
Query: 188 VGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK 245
VG V R+ER + + FTNVY+ NL +T+++ +FG FG ITS ++KD + K
Sbjct: 240 VGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDK 299
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYE 305
R FGFVN+ + + A AV++LN K YVGRAQK+ ERE +LR ++EQ ++ +
Sbjct: 300 PRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMN 359
Query: 306 KLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATR 365
K +G NL++KNL D ++DE+LK FS FGTITS K+M D+ G SKG GF ++ PEEA +
Sbjct: 360 KYQGVNLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANK 419
Query: 366 ALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGA 422
A+ EMN +M+ KPLYVA+AQRKE R+++L+AQ Q R ++ A+GIP +GA
Sbjct: 420 AVTEMNQRMLAGKPLYVALAQRKEVRRSQLEAQIQARNQFRLQQQVA-AAAGIPAVQYGA 478
Query: 423 PRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYI-MPYHLQRQVHPGQRTG 481
GP L YG PG P AA G + PG P Y MP G
Sbjct: 479 --TGP--LIYG---PGGYPIPAAVNGRGMPMVPGHNGPMPMYPGMPTQFPAGGPAPGYPG 531
Query: 482 VRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPV--PFEVSGMPATPVETP 539
+ G +P M S VP P E +PA P
Sbjct: 532 MNARGPVPAQGRPMMMPGS---------------------VPSAGPAEAEAVPAVP---- 566
Query: 540 RPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHL 599
+P + LA+ + R ++LGE LYP V E + K+TGMLLEM +E+L L
Sbjct: 567 ---GMPERFTAADLAAVPEESRKQVLGELLYPKVFVREEKLSGKITGMLLEMPNSELLEL 623
Query: 600 IESPEALKTKVAEAMAVLQE 619
+E AL +V EA+ VLQE
Sbjct: 624 LEDDSALNERVNEAIGVLQE 643
>gi|170579093|ref|XP_001894673.1| polyadenylate-binding protein 1 [Brugia malayi]
gi|158598601|gb|EDP36463.1| polyadenylate-binding protein 1, putative [Brugia malayi]
Length = 655
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 284/655 (43%), Positives = 386/655 (58%), Gaps = 57/655 (8%)
Query: 11 AAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLG 70
A V +A PS Y SLYVGDL +V E+ L++ FS V+S+RVCRD R SLG
Sbjct: 2 ATVATAGAGMTPS-YPMASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLG 60
Query: 71 YAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNK 130
YAYVN+ P DA A + +NF + GKPIRIM+S RDPS+R+SG GN+FIKNLD SIDNK
Sbjct: 61 YAYVNFQQPADAERALDTMNFDMMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNK 120
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
A+ DTF+ FG +LSCKVA D SKGYGFV FE EE+AQ AI+ +NGML+ K+VYVG
Sbjct: 121 AIYDTFSMFGNILSCKVANDEESNSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGK 180
Query: 191 FVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRC 248
F R R ++ + +FTNVY+ N A+ + E L+K+F FG ITSA VM D+DGKS+
Sbjct: 181 FQPRTARLREMGETARRFTNVYIKNFADELDKEALEKLFSKFGKITSAAVMVDADGKSKG 240
Query: 249 FGFVNFQSPDAAAAAVEKLNGTT--NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK 306
FGFV F++P+ A AV +++ ++ YV RAQK+ ER A+L+ ++EQ+++ R ++
Sbjct: 241 FGFVAFENPEDAEKAVTEMHEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQR 300
Query: 307 LKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRA 366
+G NLY+KNLDD++ND+ LK+ F +G ITS KVM D +G SKG GF F P+EAT+A
Sbjct: 301 YQGVNLYVKNLDDTVNDDILKQNFEAYGKITSAKVMCDDNGRSKGFGFVCFEKPDEATKA 360
Query: 367 LNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLG 426
+ EMNGKM+ KPLYVA+AQRKE+RKA+L +Q+ Q A M A +PG + P G
Sbjct: 361 VTEMNGKMMCTKPLYVALAQRKEDRKAQLASQYMQRLASIRMHN-AGSMPGTVY-TPGTG 418
Query: 427 ---------------PQQLYYGQGTPGLMPPQ-----AAGYGFQQQVF-----------P 455
P G G P AAG+G Q
Sbjct: 419 GFFVSSTLQNQRAFMPTATIPGAQMRGTTPRWNTIGAAAGFGVQSPYMVQSGGYGQAGRG 478
Query: 456 GLRPGGPNYIMPYHLQR-QVHPGQRTGVRRSGNTHQ-------MQQPQFMRNSNQGIRYL 507
G RP + + Q+ Q PGQ TGV R G Q M Q Q R+ G R
Sbjct: 479 GTRPTASSAAVAMRAQQGQYGPGQ-TGVTRGGPQAQRLTAGSAMVQNQGTRSQQMGGRQT 537
Query: 508 DNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPV----PISTLTSALASASPDDRTR 563
+ Q + S ++G P + + P++ LA A P ++ +
Sbjct: 538 QPGKPNQGQMMYSSYSA---ITGRPGQVQSQQNSIVIQGQEPLT--AHMLAQALPQEQKQ 592
Query: 564 MLGEQLYPLVENI-EPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVL 617
MLGE++YPL+E I + K+TGM+LEMD +E+L ++E+ E L++KV+EA +VL
Sbjct: 593 MLGERIYPLIERIYQGPDVGKITGMMLEMDNSELLMMLENEELLQSKVSEAASVL 647
>gi|281345572|gb|EFB21156.1| hypothetical protein PANDA_005635 [Ailuropoda melanoleuca]
Length = 605
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 274/608 (45%), Positives = 374/608 (61%), Gaps = 28/608 (4%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
GY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 7 GYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAE 66
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A + +NF I G+P+RIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +L
Sbjct: 67 RALDTMNFEVIKGQPVRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNIL 126
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--N 201
SCKV D +G S+G+GFV FE EAA AI +NGML+ND++V+VG F R+ER +
Sbjct: 127 SCKVVCDDHG-SRGFGFVHFETHEAAHQAIATMNGMLLNDRKVFVGHFKSRREREAELGA 185
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
+ +FTN+YV NL V ++ L+ +F FG + S VM+D G SR FGFVNF+ + A
Sbjct: 186 RAMEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDIGHSRGFGFVNFEKHEEAQ 245
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV +NG + ++ YVGRAQKR ER+ +L+ +FEQ + R + +G NLY+KNLDDSI
Sbjct: 246 KAVMDMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRATRYQGVNLYVKNLDDSI 305
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DEKL++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG+++G KPLY
Sbjct: 306 DDEKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLY 364
Query: 382 VAVAQRKEERKARLQAQFAQ----IRAPGGMSPLASGI---PGYHHGAPRLGPQQLYYGQ 434
VA+AQRKEERKA L Q+ Q +RA GG PL Y A P Q Y
Sbjct: 365 VALAQRKEERKAILTNQYMQRLSTVRALGG--PLLGSFQQPASYFLPAVPQPPAQAAYYA 422
Query: 435 GTPGLMP-PQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQ 493
+P + P P+ + +RP P L+R P Q VR++
Sbjct: 423 SSPSVQPAPRWTAQPPRVSSASMVRP-------PAMLRRP--PAQVNSVRQASTQVPPPG 473
Query: 494 PQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVP-ISTLTSA 552
P R +N G + +G S + + + S P V +P LT++
Sbjct: 474 PHTQRVANIGTQ--TTGASGVGYSTPTGPVLTHKYSSAAHNPGVRESAVCIPGQEPLTAS 531
Query: 553 LASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVA 611
+ +A+P ++ +M+GE+LYPL+ + A K+TGMLLE+D +E+L ++ESPE+L KV
Sbjct: 532 MLAAAPLHEQKQMIGERLYPLIYDTHTQLAGKITGMLLEIDNSELLLMLESPESLNAKVV 591
Query: 612 -EAMAVLQ 618
EA+AVLQ
Sbjct: 592 EEALAVLQ 599
>gi|82802755|gb|ABB92428.1| PABP3 [Pongo pygmaeus]
Length = 635
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 278/646 (43%), Positives = 378/646 (58%), Gaps = 62/646 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R S YAYVN+ +P+DA +
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAEH 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S DPS+RKSG GN+F+KNLD SI+NKAL DT +AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQHDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +F NVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFEKHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDD 319
AV+++NG + K YVGRAQK+ ER+ +L+ KFE Q+RI+RY+ + NLY+KNLDD
Sbjct: 247 AVDEMNGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVV---NLYVKNLDD 303
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
I+DE+L++ FS FGTITS KVM++ G S+G GF FS PEEAT+A+ EMNG ++ KP
Sbjct: 304 DIDDERLRKAFSPFGTITSAKVMME-GGRSRGFGFVCFSSPEEATKAVTEMNGIIVATKP 362
Query: 380 LYVAVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGA 422
LYV++A RKEER+A L ++ Q +RA P G + +P + A
Sbjct: 363 LYVSLAHRKEERQAYLTNEYMQRMAGVRAVPNPVINPYQPAPPSGY--FMAAVPQTQNHA 420
Query: 423 PRLGPQQLYYGQGTPGLMPPQAAGYGFQQQ-----------VFPGLRPGGPNYIMPYHLQ 471
P Q+ + +P A + FQ + F +RP Q
Sbjct: 421 AYYPPSQIAQLRPSPCWTAQGARPHPFQNKPSAICPAAPRVPFSTMRPASSQVPRVMSTQ 480
Query: 472 RQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFE 527
R + +T R P + +Y RN Q V+M
Sbjct: 481 RVANTSTQTVGPRPAAAAAAATPAV--RTVPRYKYAAGVRNPQQHLNAQPEVTMQQPAVH 538
Query: 528 VSGMPATPVETPRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTG 586
V G TLT S LASA P + +MLGE+L+PL+E + P A K+TG
Sbjct: 539 VQGQ---------------ETLTASMLASAPPQKQKQMLGERLFPLIEAMRPTLAGKITG 583
Query: 587 MLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGS 632
MLLE+D +E+LH++ESPE+L +KV EA+AVLQ A+ + + S
Sbjct: 584 MLLEIDNSELLHMLESPESLGSKVDEAVAVLQAHQAKEATQKAVNS 629
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S Y +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQH 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
+ A++A+ +N +I K V + + V N++V NL +++ ++ L
Sbjct: 62 PKDAEHALDTMNFDVIKGKPVRIMWSQHDPSLRKSGVG----NIFVKNLDKSINNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TVSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L AK ++ N+Y+KN + ++DE+LK+LF +FG S KVM D+
Sbjct: 177 KEREAELGAKAKE----------FPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|409082274|gb|EKM82632.1| hypothetical protein AGABI1DRAFT_111221 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 671
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 271/635 (42%), Positives = 369/635 (58%), Gaps = 54/635 (8%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ V E+ L+++F+ + V S+RVCRD R SLGYAYVNY N D A
Sbjct: 41 SASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 100
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I + RIM+S RDP++RK+G GNVFIKNLD +IDNKAL DTF AFG VLSCK
Sbjct: 101 EQLNYSLIKNRACRIMWSQRDPALRKTGQGNVFIKNLDEAIDNKALHDTFVAFGNVLSCK 160
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSP 204
VA D +G+SKGYGFV +E EAA NAIK +NGML+NDK+VYVG + R+ER + +
Sbjct: 161 VATDEHGRSKGYGFVHYETAEAADNAIKSVNGMLLNDKKVYVGHHISRKERQSKLDEMKA 220
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
+FTN+Y+ NL VT E+ ++F +G +TS++V D +GKS+ FGFVN++ + A AV
Sbjct: 221 QFTNLYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDEEGKSKGFGFVNYERHEEAQRAV 280
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
++L+ T K +V RAQK+AERE +LR +EQ ++ + K +G NLY+KNL+D +D+
Sbjct: 281 DELHDTDLKGKKLFVARAQKKAEREDELRRSYEQAKLEKLSKYQGINLYIKNLEDDFDDD 340
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KL+ F FG ITSCKVM D+ G SKG GF FS P+EAT+A+ EMN KMIG KPLYV++
Sbjct: 341 KLRAEFEPFGAITSCKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSL 400
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYH----------------------HGA 422
AQR+E R+ +L++Q AQ A+G+PG + +G
Sbjct: 401 AQRREVRRQQLESQIAQRNQIRMQQAAAAGVPGGYINGPMYYPPGPGFPPQGRGMMGYGQ 460
Query: 423 PRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVF------------------PGLRPGGPNY 464
P + P ++ Y G MPP YG Q + PG P P+
Sbjct: 461 PGMMPPRIRYPNGQVPSMPPVPGPYGQGPQPYGMPGYPPRGAPRPPVARGPGSSPTHPSV 520
Query: 465 IMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPV 524
MP R P G R PQ ++ A Q +
Sbjct: 521 PMP----RANGPAPNGGAARPA-------PQGAPAGSRAPPPGAPAPGRAPQPAYNKPQA 569
Query: 525 PFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKV 584
+ + + A P P+ +P T LA+ASP ++ +MLGE +Y + +P A K+
Sbjct: 570 RPQGAPVTAQPAAAPQQSSLPNLT-ADQLAAASPMEQKQMLGEVIYMRIVPSQPELAGKI 628
Query: 585 TGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
TGMLLEMD E+L L++S EA+ KV EA VLQE
Sbjct: 629 TGMLLEMDNNELLALLDSEEAMNAKVQEANTVLQE 663
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y ++LY+ +LE + ++ +L F + S +V RD+ K +S G+ +V +S+P +A
Sbjct: 321 SKYQGINLYIKNLEDDFDDDKLRAEFEPFGAITSCKVMRDE-KGTSKGFGFVCFSSPDEA 379
Query: 83 ANAKEALNFMPINGKPIRIMYSHR 106
A +N I KP+ + + R
Sbjct: 380 TKAVAEMNNKMIGTKPLYVSLAQR 403
>gi|212540254|ref|XP_002150282.1| polyadenylate-binding protein [Talaromyces marneffei ATCC 18224]
gi|210067581|gb|EEA21673.1| polyadenylate-binding protein [Talaromyces marneffei ATCC 18224]
Length = 748
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 301/709 (42%), Positives = 390/709 (55%), Gaps = 120/709 (16%)
Query: 10 TAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSL 69
TAA +ATT P+ + SLYVG+L+ +V E+ L++LFS + QV S+RVCRD R SL
Sbjct: 33 TAASDAATTPN-PNQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSL 91
Query: 70 GYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDN 129
GYAYVNY+N D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLDT+IDN
Sbjct: 92 GYAYVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDN 151
Query: 130 KALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVG 189
KAL DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+NDK+V+VG
Sbjct: 152 KALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVG 211
Query: 190 LFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSR 247
+ +++R + + FTNVYV N+ VTDE+ +++FG FG ITSA + +D GKSR
Sbjct: 212 HHISKKDRQSKFEEMKANFTNVYVKNIDPEVTDEEFRELFGKFGDITSATISRDDSGKSR 271
Query: 248 CFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKL 307
FGFVN+ + A AV+ LN + + YVGRAQK+ ERE +LR ++E R+ + K
Sbjct: 272 GFGFVNYVDHENAQTAVDDLNDKDFHGQKLYVGRAQKKHEREEELRRQYEAARLEKASKY 331
Query: 308 KGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ---------------------- 345
+G NLY+KNL D ++DEKL+ELFS FGTITS KVM D
Sbjct: 332 QGVNLYVKNLTDDVDDEKLRELFSAFGTITSAKVMRDTVGAGSDSEKEETKESSEEVEEP 391
Query: 346 ------------------------HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
G SKG GF FS P+EA++A+ EMN +M+ KPLY
Sbjct: 392 KEEETNAKTEDEDKTDAKKSDKKVFGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLY 451
Query: 382 VAVAQRKEERKARLQAQF-AQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLM 440
VA+AQRK+ RK++L+A A+ + A+G+P P + P ++YG G G +
Sbjct: 452 VALAQRKDVRKSQLEASIQARNTIRQQQAAAAAGMP-----QPYMQP-AVFYGPGQQGFL 505
Query: 441 PPQAA--GYGFQQQV------FPGLRPG---------------GPNYIMPYHLQR----- 472
P A G F Q PG RPG GPN I P + +
Sbjct: 506 PGNAGQRGMAFAPQPGMVMAGIPGGRPGQYPGGFPQQGGRGIAGPNQI-PQNFGQGIPIG 564
Query: 473 --QVHPGQRTGVRRSGNTHQMQQPQFMRNSN------QGI-------------RYLDNAR 511
Q PG G+ QM Q QF R + QGI
Sbjct: 565 AMQAGPG---GIPNGMAYPQMAQVQFGRGAGGRGQVPQGIPPNVGGPRGGPGFGQGRGGM 621
Query: 512 NGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLT-SALASASPDDRTRMLGEQLY 570
VP +G PA P TP TLT AL +A P + +MLGE LY
Sbjct: 622 PPRPGPGGRGQNVP---AGAPAAPEGTP-------GTLTLQALTAAPPQQQKQMLGEALY 671
Query: 571 PLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
P ++ +P A K+TGMLLEMD E+L LI+ AL+ KV EA+ V E
Sbjct: 672 PKIQAQQPELAGKITGMLLEMDNAELLGLIDDESALRAKVDEALHVYDE 720
>gi|293337013|ref|NP_001169661.1| uncharacterized protein LOC100383542 [Zea mays]
gi|224030689|gb|ACN34420.1| unknown [Zea mays]
Length = 442
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 240/447 (53%), Positives = 312/447 (69%), Gaps = 20/447 (4%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL + V+E QL+ LFSQVA V +VRVCRD SLGY YVN+ + Q+A A EA
Sbjct: 3 SLYVGDLAETVDEPQLHALFSQVAPVATVRVCRDILSGVSLGYGYVNFYSRQEATRALEA 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF P+ GK IR+M+S+RDPS+RKSG N+F+KNL+ +ID+K L + F++FG +LSCKVA
Sbjct: 63 LNFTPLIGKYIRVMFSNRDPSLRKSGRANLFVKNLEPNIDSKNLYEIFSSFGAILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
DS GQSKGYGFVQ+E EE+A+ AI LNGML N+++++VGL +RR++R KFTN
Sbjct: 123 TDSAGQSKGYGFVQYETEESAEAAINGLNGMLANNRKMFVGLHMRRRDR-----EVKFTN 177
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
VY+ NL +++DL++ F FG ITSA+VM+D+DG S+CFGFVNF+ P+ A AVEK N
Sbjct: 178 VYIKNLPTEFSEDDLRQEFAPFGEITSAVVMRDADGASKCFGFVNFKKPEFAIEAVEKAN 237
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G DK YVGRAQK+ ER+A+L+ +F + R ++ +K G NLYLKN+DD INDE LK+
Sbjct: 238 GKAIGDKTLYVGRAQKKEERKAELKTRFGRGRDNKVDKPNGINLYLKNIDDGINDEGLKK 297
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRK 388
LF EFG + SCKVMVD G SKGSGF +F+ E RA+N MNG+++G+KPLYV +AQ K
Sbjct: 298 LFEEFGQVASCKVMVDARGRSKGSGFVSFATAEAGQRAINRMNGRIVGKKPLYVGLAQPK 357
Query: 389 EERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ-GTPG-LMPPQAAG 446
EERKA L A FAQ S A GPQQ+Y+G +PG + PPQ A
Sbjct: 358 EERKAMLMAHFAQRNLAMAASQYA-------------GPQQVYFGHPSSPGPIAPPQGAV 404
Query: 447 YGFQQQVFPGLRPGGPNYIMPYHLQRQ 473
+GF Q PG+ P P + P + Q
Sbjct: 405 FGFPQHFVPGMGPISPVMMPPLRPEAQ 431
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 153/289 (52%), Gaps = 14/289 (4%)
Query: 26 GNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANA 85
G +L+V +LE N++ LY++FS ++S +V D + +S GY +V Y + A A
Sbjct: 88 GRANLFVKNLEPNIDSKNLYEIFSSFGAILSCKVATDSAGQSK-GYGFVQYETEESAEAA 146
Query: 86 KEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSC 145
LN M N + + + R R+ + NV+IKNL T L FA FG + S
Sbjct: 147 INGLNGMLANNRKMFVGLHMRRRD-REVKFTNVYIKNLPTEFSEDDLRQEFAPFGEITSA 205
Query: 146 KVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS-- 203
V D++G SK +GFV F+ E A A++ NG I DK +YVG +++ER + +
Sbjct: 206 VVMRDADGASKCFGFVNFKKPEFAIEAVEKANGKAIGDKTLYVGRAQKKEERKAELKTRF 265
Query: 204 ----------PKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVN 253
P N+Y+ N+ + + DE LKK+F FG + S VM D+ G+S+ GFV+
Sbjct: 266 GRGRDNKVDKPNGINLYLKNIDDGINDEGLKKLFEEFGQVASCKVMVDARGRSKGSGFVS 325
Query: 254 FQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
F + +A A+ ++NG K YVG AQ + ER+A L A F Q ++
Sbjct: 326 FATAEAGQRAINRMNGRIVGKKPLYVGLAQPKEERKAMLMAHFAQRNLA 374
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD-QHGFSKGSGFAAFSMPEEATRALN 368
A+LY+ +L +++++ +L LFS+ + + +V D G S G G+ F +EATRAL
Sbjct: 2 ASLYVGDLAETVDEPQLHALFSQVAPVATVRVCRDILSGVSLGYGYVNFYSRQEATRALE 61
Query: 369 EMN 371
+N
Sbjct: 62 ALN 64
>gi|383862671|ref|XP_003706807.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3
[Megachile rotundata]
Length = 601
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 274/620 (44%), Positives = 365/620 (58%), Gaps = 43/620 (6%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD +IDNKA+ DTF+AFG +LS
Sbjct: 68 ALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA D +G SKGYGFV FE EEAA +I +NGML+N K+
Sbjct: 128 CKVAQDESGVSKGYGFVHFETEEAANKSIDKVNGMLLNGKK------------------- 168
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
N E +TD+ LK++F +GTITS VM DGKSR FGFV F+ PDAA AV
Sbjct: 169 --------NFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAV 220
Query: 265 EKLNGT-TNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIND 323
+LNG K YVGRAQK+AER+ +L+ KFEQ ++ R + +G NLY+KNLDDSIND
Sbjct: 221 LELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLSRYQGVNLYVKNLDDSIND 280
Query: 324 EKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVA 383
E+L+ F+ FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG++I KPLYVA
Sbjct: 281 ERLRREFAPFGTITSAKVMME-DGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVA 339
Query: 384 VAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHG---APRLGPQQLYYGQGTPGLM 440
+AQRKE+RKA L +Q+ Q A M + P G P + Q +YG +
Sbjct: 340 LAQRKEDRKAHLASQYMQRLANMRMQQMGQMFPPGGAGNYFVPTIPQPQRFYGPAQMAQI 399
Query: 441 PPQAAGYGFQQQVFPGLRPGGPNYIM---PYHLQRQVHPGQRTGVRRSGNTHQMQQPQFM 497
QV P + G + P+ + Q +R + + + Q +
Sbjct: 400 RATPRWPAQPNQVRPNAQTGNSGFATMQGPFRTTPRAPTAQAGTMRSTLSARPITGQQAV 459
Query: 498 RNSNQGIRYLDNARNG-------TDQSVVSMVPVPFEVSGMPA-TPVETPRPVPVPISTL 549
+N R + G ++ S + P + +PA TPV+ +
Sbjct: 460 GGANMQSRSMAGPAVGVSAQSRPSNYKYTSNMRNPPQAMAIPAPTPVQQAVHIQGQEPLT 519
Query: 550 TSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTK 609
S LA+A P ++ +MLGE+L+PL++ + P K+TGMLLE+D +E+LH++E E+LK K
Sbjct: 520 ASMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSELLHMLEHNESLKAK 579
Query: 610 VAEAMAVLQEAAARSDVNEK 629
V EA+AVLQ A+ V K
Sbjct: 580 VEEAVAVLQAHQAKQAVASK 599
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y V+LYV +L+ ++N+ +L F+ + S +V + + S G+ +V +S P++A
Sbjct: 262 SRYQGVNLYVKNLDDSINDERLRREFAPFGTITSAKVMMEDGR--SKGFGFVCFSAPEEA 319
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
A +N I KP+ + + R RK+ + +++ L
Sbjct: 320 TKAVTEMNGRIIVTKPLYVALAQRKED-RKAHLASQYMQRL 359
>gi|354476610|ref|XP_003500517.1| PREDICTED: polyadenylate-binding protein 1-like [Cricetulus
griseus]
Length = 637
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 281/653 (43%), Positives = 386/653 (59%), Gaps = 71/653 (10%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RV RD++ R SLGYA VN+ +DA
Sbjct: 8 YSLASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDRTTRRSLGYASVNFQQLEDAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+F+KNLD SID+KAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDRSIDSKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +E A+ AI+ +NGM +ND++V+VG F R++R +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEEAERAIEKMNGMFLNDRKVFVGRFKSRRDRQAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ NL E + DE L+ +F FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNLGEDMDDERLQGLFSKFGPALSVKVMTDESGKSKGFGFVSFERHEDARK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYE----------KLKGANL 312
AV+++NG N K YVGRAQK+ ER+ +L+ KF Q + +++ + +G NL
Sbjct: 247 AVDEMNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKHKVEQVPQDISVRCQGVNL 306
Query: 313 YLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNG 372
Y+KNLDD I+DE+L++ FS FGTITS KV ++ G SKG GF FS PEEAT+A+ EMNG
Sbjct: 307 YVKNLDDGIDDERLRKEFSPFGTITSAKVTME-GGRSKGFGFVCFSSPEEATKAVTEMNG 365
Query: 373 KMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYY 432
+++ KPLYVA+AQRKEER+A L Q+ Q A S ++S P + P Q
Sbjct: 366 RIVATKPLYVALAQRKEERQAHLSNQYMQRMA--STSAVSS---------PVINPFQ--- 411
Query: 433 GQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ 492
P QA F G Y P +Q PG R G + H Q
Sbjct: 412 --------PAQAPSGYFMTTTSQTQNCGA--YYAPNQTTQQ-GPGHR-GSAQGARAHPFQ 459
Query: 493 Q----------PQFMRN---SNQGIRYLDNARNGTDQSVV-----SMVPVP-FEVSG--- 530
P F + S+Q +R + R G+ + + + PVP ++ +
Sbjct: 460 NMSSAIQPATIPSFSTSGPASSQALRSMSTHRAGSASTQMMGSHPTARPVPQYKYTAGVR 519
Query: 531 -----MPATPVETPRPVPVPI----STLTSALASASPDDRTRMLGEQLYPLVENIEPVHA 581
+ A P T + VP+ S S LASASP + +MLGE L+ L++ + P A
Sbjct: 520 NPPQHLSAQPQVTMQRSAVPVQGKASLTASMLASASPQAQKQMLGEWLFSLIQAMHPALA 579
Query: 582 SKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
K+TGMLLE+D E+ H++ESPE L TK+ EA+AVLQ A+ + +GS+A
Sbjct: 580 GKITGMLLEIDNLELRHMLESPECLHTKIDEAIAVLQAHQAKETPQQAVGSVA 632
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 167/309 (54%), Gaps = 35/309 (11%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ +V +L+++++ LYD FS ++S +V D++ S GY +V++ ++A
Sbjct: 96 SGVGNI--FVKNLDRSIDSKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEEA 151
Query: 83 ANAKEALNFMPINGKPIRI--MYSHRDPSI----RKSGYGNVFIKNLDTSIDNKALCDTF 136
A E +N M +N + + + S RD R + NV+IKNL +D++ L F
Sbjct: 152 ERAIEKMNGMFLNDRKVFVGRFKSRRDRQAELGARAKEFTNVYIKNLGEDMDDERLQGLF 211
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
+ FG LS KV D +G+SKG+GFV FE E A+ A+ +NG +N KQ+YVG ++ E
Sbjct: 212 SKFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVDEMNGKDLNGKQIYVGRAQKKVE 271
Query: 197 RAQQNVSPKF-----------------------TNVYVNNLAETVTDEDLKKIFGHFGTI 233
R Q + KF N+YV NL + + DE L+K F FGTI
Sbjct: 272 R-QTELKHKFGQMKQDKHKVEQVPQDISVRCQGVNLYVKNLDDGIDDERLRKEFSPFGTI 330
Query: 234 TSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLR 293
TSA V + G+S+ FGFV F SP+ A AV ++NG K YV AQ++ ER+A L
Sbjct: 331 TSAKVTMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLS 389
Query: 294 AKFEQERIS 302
++ Q S
Sbjct: 390 NQYMQRMAS 398
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFEN 165
+PS ++++ +L + L + F++ G +LS +V D + +S GY V F+
Sbjct: 2 NPSDPSYSLASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDRTTRRSLGYASVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
E A+ A+ +N +I K V + R + V N++V NL ++ + L
Sbjct: 62 LEDAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFVKNLDRSIDSKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ + A A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEEAERAIEKMNGMFLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
+R+A+L A+ ++ N+Y+KNL + ++DE+L+ LFS+FG S KVM D+
Sbjct: 177 RDRQAELGARAKE----------FTNVYIKNLGEDMDDERLQGLFSKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDARKAVDEMNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMK 284
>gi|351703575|gb|EHB06494.1| Polyadenylate-binding protein 1-like protein [Heterocephalus
glaber]
Length = 605
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 271/609 (44%), Positives = 377/609 (61%), Gaps = 37/609 (6%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
GY SLYVGDL +V E+ LY+ FS V ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 7 GYPLSSLYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAE 66
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A + +NF I G+PIRIM+S RDP +RKSG GNVFIKNL+ SID+KAL DTF+ FG +L
Sbjct: 67 RALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNVFIKNLEDSIDSKALYDTFSTFGNIL 126
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--N 201
SCKVA D +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F +ER +
Sbjct: 127 SCKVACDEHG-SRGFGFVHFETNEAAQQAISTMNGMLLNDRKVFVGHFKSHREREAELGA 185
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
+ FTN+YV NL + ++ L+ +F FG + S VM+D+ G SR FGFVNF+ + A
Sbjct: 186 QALAFTNIYVKNLHVDMDEQGLQDLFFEFGKMLSVKVMRDNSGHSRGFGFVNFEKHEEAQ 245
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV+ +NG + + YVGRAQKR ER+ +L+ +FEQ + R + +G NLY+KNLDDSI
Sbjct: 246 KAVDHMNGKEVSGQQLYVGRAQKRGERQNELKRRFEQMKQDRQTRYQGVNLYVKNLDDSI 305
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DEKL+ +FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG ++G KPLY
Sbjct: 306 SDEKLRTVFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGCIVGTKPLY 364
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLM- 440
VA+AQRKEERKA L Q+ Q +S + + G P +G Q P +
Sbjct: 365 VALAQRKEERKAILTNQYMQ-----RLSTVQA------LGRPVMGSFQQPNSYFLPAVAQ 413
Query: 441 -PPQAAGYGFQQQVFPGLRPGGPNY--------IMPYHLQRQVHPGQRTGVRRSGNTHQM 491
P QA YG V P ++P P + ++ + + VR++
Sbjct: 414 PPAQATCYGGSGSVAP-VQP-APRWTAQPQRASLVRPPGLPRRPRAHVSSVRQASTQVPY 471
Query: 492 QQPQFMRNSNQGIRYLDNAR-NGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLT 550
P + +N G + + +R T+ +S V G+P V P P LT
Sbjct: 472 LAPHTKKVANIGTQTMGASRACSTEGPSLSAV---LTAHGVPEPAVHVPGQEP-----LT 523
Query: 551 SALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTK 609
+++ +A+P ++ +M+GE+LY L+ + A K+TGMLLE+D +E+L ++ESPE+L+ K
Sbjct: 524 ASMLAAAPLHEQKQMIGERLYRLIPEVYAALAGKITGMLLEIDNSELLLMLESPESLQAK 583
Query: 610 VAEAMAVLQ 618
V EA+AVLQ
Sbjct: 584 VEEAVAVLQ 592
>gi|255652857|ref|NP_001157308.1| poly(A) binding protein, cytoplasmic 3 [Mus musculus]
gi|12855391|dbj|BAB30319.1| unnamed protein product [Mus musculus]
gi|26325704|dbj|BAC26606.1| unnamed protein product [Mus musculus]
Length = 643
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 282/641 (43%), Positives = 372/641 (58%), Gaps = 41/641 (6%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RV RD+ R SLGYA VN+ +DA
Sbjct: 8 YSLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQLEDAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+F+KNLD SID+K L DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDRSIDSKTLYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +E A+ AI+ +NGM +ND +V+VG F R++R +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEEAERAIEKMNGMFLNDHKVFVGRFKSRRDRQAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ NL E + DE L+ +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNLGEDMDDERLQDLFGRFGPALSVKVMTDESGKSKGFGFVSFERHEDARK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ--------ERI--SRYEKLKGANL 312
AVE++NG N K YVGRAQK+ ER+ +L+ KF Q ER+ R + KG NL
Sbjct: 247 AVEEMNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKHKIERVPQDRSVRCKGVNL 306
Query: 313 YLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNG 372
Y+KNLDD I+DE+L++ FS FGTITS KV ++ G SKG GF FS PEEAT+A+ EMNG
Sbjct: 307 YVKNLDDGIDDERLRKEFSPFGTITSAKVTMEG-GRSKGFGFVCFSSPEEATKAVTEMNG 365
Query: 373 KMIGRKPLYVAVAQRKEERKARLQAQFAQIRA--PGGMSPLAS------GIPGYHHGAPR 424
K++ KPLYVA+AQRKEER+A L Q+ Q A G +P+ S G GY A
Sbjct: 366 KIVATKPLYVALAQRKEERQAHLSNQYMQRMASTSAGPNPVVSPFQPAQGPSGYCMTATP 425
Query: 425 LGPQQLYYGQGTPGLMPPQAAG--YGFQQQVFPGLRPG-GPNYIMPYHLQRQVHPGQRTG 481
++ Y P A G +G + F + P++ MP Q
Sbjct: 426 TQSRRAYCAPNQTTQQGPSARGSAHGTRAHPFQNMSSTIHPSHTMPSFSTSGPTTSQAIR 485
Query: 482 VRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPR- 540
R + + QM P + R T + V P P P P
Sbjct: 486 HRTASTSTQMMGPH--PAAAAAAAAAPATRTITQYKYTAGVRNP------PQHPNTQPHV 537
Query: 541 -------PVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQ 593
PV S S LASA P + +MLGE L+ L++ + P A K+TGMLLE+D
Sbjct: 538 STQRSAVPVQGKESLTASMLASAPPQAQKQMLGEWLFSLIQAMHPALAGKITGMLLEIDN 597
Query: 594 TEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+ H++ESPE L TKV EA+AVLQ A+ + + S+A
Sbjct: 598 IELRHMLESPECLHTKVDEAIAVLQAHQAKETSQKAVSSVA 638
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 164/298 (55%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY V F+
Sbjct: 2 NPSDPSYSLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
E A+ A+ +N +I K V + R + V N++V NL ++ + L
Sbjct: 62 LEDAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFVKNLDRSIDSKTLYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ + A A+EK+NG ND +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEEAERAIEKMNGMFLNDHKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
+R+A+L A+ ++ N+Y+KNL + ++DE+L++LF FG S KVM D+
Sbjct: 177 RDRQAELGARAKE----------FTNVYIKNLGEDMDDERLQDLFGRFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDARKAVEEMNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMK 284
>gi|388582290|gb|EIM22595.1| polyadenylate binding protein [Wallemia sebi CBS 633.66]
Length = 637
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 282/624 (45%), Positives = 372/624 (59%), Gaps = 69/624 (11%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ V E+ L+++F+ + V S+RVCRD R SLGYAYVNY N QD A
Sbjct: 37 SASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNLQDGERAL 96
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I + RIM+S RDP++RK+G GN+FIKNLD +IDNKAL DTFAAFG VLSCK
Sbjct: 97 EQLNYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEAIDNKALHDTFAAFGNVLSCK 156
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSP 204
VA D NG S+GYGFV +EN E+A AI+ +NGML+NDK+VYVG V ++ER +
Sbjct: 157 VATDENGNSRGYGFVHYENGESASAAIQHVNGMLLNDKKVYVGHHVSKKERQAKIDEQKS 216
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
+FTNV++ NL +V DE K+I +G I SA+V KD G SR FGFVN+++ + AA AV
Sbjct: 217 QFTNVFIKNLDVSVDDEKFKQILEPYGEILSAVVQKDEQGNSRGFGFVNYKNHEEAAKAV 276
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
E LN + K + RAQK+ ERE +LR +EQ ++ + K G NLY+KNLDD +DE
Sbjct: 277 ESLNEVEVDGKKIFAARAQKKNEREEELRRNYEQAKLEKLAKYAGVNLYVKNLDDDFDDE 336
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
+L F FGTITS K+M D+ G SKG GF FS P+EAT+A++E++GKMIG KPLYV++
Sbjct: 337 RLVGEFEPFGTITSAKIMRDEKGTSKGFGFVCFSSPDEATKAVSELSGKMIGSKPLYVSL 396
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSPLASGIP--GYHHGAPRL--GPQQLYYG----QGT 436
AQR++ R+ +L++Q AQ A+G+P G+ GAP P Y G G
Sbjct: 397 AQRRDVRRQQLESQIAQRNQLRLQHQAAAGVPISGFMPGAPMYYQPPPGAYPGGRSMYGQ 456
Query: 437 PGLMPPQAAGYGFQQQVFPGLRPGGPNY-----IMPYHLQRQVHPGQRTGVRRSGNTHQM 491
PG PP+ GY QQV PG+ P MP + R P + G + G
Sbjct: 457 PGFAPPRPRGYPAGQQV-PGMPIPSPYGPPPQGYMPANY-RPARPARANGAQVQG----- 509
Query: 492 QQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTL-- 549
G +N R PA P PRP VP+
Sbjct: 510 -----------GSPTANNVR--------------------PAVPASGPRPAGVPVRPAQG 538
Query: 550 --------------TSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTE 595
S LA+A P ++ +MLGE LYP + NI+P A K+TGMLLEM+ +E
Sbjct: 539 AAKPAKQEAGGPLSASVLANAPPAEQKQMLGEALYPKIFNIQPELAGKITGMLLEMENSE 598
Query: 596 VLHLIESPEALKTKVAEAMAVLQE 619
+L L+E+ EALK+KV EA+AVL E
Sbjct: 599 LLFLLENEEALKSKVDEAIAVLNE 622
>gi|148670144|gb|EDL02091.1| RIKEN cDNA 4932702K14 [Mus musculus]
Length = 642
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 282/641 (43%), Positives = 372/641 (58%), Gaps = 42/641 (6%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RV RD+ R SLGYA VN+ +DA
Sbjct: 8 YSLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQLEDAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+F+KNLD SID+K L DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDRSIDSKTLYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +E A+ AI+ +NGM +ND +V+VG F R++R +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEEAERAIEKMNGMFLNDHKVFVGRFKSRRDRQAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ NL E + DE L+ +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNLGEDMDDERLQDLFGRFGPALSVKVMTDESGKSKGFGFVSFERHEDARK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ--------ERI--SRYEKLKGANL 312
AVE++NG N K YVGRAQK+ ER+ +L+ KF Q ER+ R + KG NL
Sbjct: 247 AVEEMNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKHKIERVPQDRSVRCKGVNL 306
Query: 313 YLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNG 372
Y+KNLDD I+DE+L++ FS FGTITS KV ++ G SKG GF FS PEEAT+A+ EMNG
Sbjct: 307 YVKNLDDGIDDERLRKEFSPFGTITSAKVTMEG-GRSKGFGFVCFSSPEEATKAVTEMNG 365
Query: 373 KMIGRKPLYVAVAQRKEERKARLQAQFAQIRA--PGGMSPLAS------GIPGYHHGAPR 424
K++ KPLYVA+AQRKEER+A L Q+ Q A G +P+ S G GY A
Sbjct: 366 KIVATKPLYVALAQRKEERQAHLSNQYMQRMASTSAGPNPVVSPFQPAQGPSGYCMTATP 425
Query: 425 LGPQQLYYGQGTPGLMPPQAAG--YGFQQQVFPGLRPG-GPNYIMPYHLQRQVHPGQRTG 481
++ Y P A G +G + F + P++ MP Q
Sbjct: 426 TQSRRAYCAPNQTTQQGPSARGSAHGTRAHPFQNMCSTIHPSHTMPSFSTSGPTTSQAIR 485
Query: 482 VRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPR- 540
R + + QM P + R T + V P P P P
Sbjct: 486 HRTASTSTQMMGPH---PAAAAAAAAPATRTITQYKYTAGVRNP------PQHPNTQPHV 536
Query: 541 -------PVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQ 593
PV S S LASA P + +MLGE L+ L++ + P A K+TGMLLE+D
Sbjct: 537 STQRSAVPVQGKESLTASMLASAPPQAQKQMLGEWLFSLIQAMHPALAGKITGMLLEIDN 596
Query: 594 TEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+ H++ESPE L TKV EA+AVLQ A+ + + S+A
Sbjct: 597 IELRHMLESPECLHTKVDEAIAVLQAHQAKETSQKAVSSVA 637
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 164/298 (55%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY V F+
Sbjct: 2 NPSDPSYSLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
E A+ A+ +N +I K V + R + V N++V NL ++ + L
Sbjct: 62 LEDAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFVKNLDRSIDSKTLYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ + A A+EK+NG ND +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEEAERAIEKMNGMFLNDHKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
+R+A+L A+ ++ N+Y+KNL + ++DE+L++LF FG S KVM D+
Sbjct: 177 RDRQAELGARAKE----------FTNVYIKNLGEDMDDERLQDLFGRFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDARKAVEEMNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMK 284
>gi|173421|gb|AAA35320.1| poly(A)-binding protein, partial [Schizosaccharomyces pombe]
Length = 628
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 276/620 (44%), Positives = 373/620 (60%), Gaps = 48/620 (7%)
Query: 10 TAAVTSATTAAVPSGYG--NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRS 67
T+ T+A++ A PSG + SLYVG+L+ +V E+ L++LF+ + V S+RVCRD R
Sbjct: 46 TSTPTNASSVATPSGTAPTSASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRR 105
Query: 68 SLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSI 127
SLGYAYVN+ N +D A + LN+ I G+P RIM+S RDPS+RK G GNVFIKNLD +I
Sbjct: 106 SLGYAYVNFHNMEDGEKALDELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAI 165
Query: 128 DNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVY 187
DNKAL DTF+AFG +LSCKVA+D G +KGYGFV F++ E+A AI+ +NGML+NDK+VY
Sbjct: 166 DNKALHDTFSAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVY 225
Query: 188 VGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK 245
VG V R+ER + + FTNVY+ NL +T+++ +FG FG ITS ++KD + K
Sbjct: 226 VGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDK 285
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYE 305
R FGFVN+ + + A AV++LN K YVGRAQK+ ERE +LR +EQ ++ +
Sbjct: 286 PRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKAYEQMKLEKMN 345
Query: 306 KLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATR 365
K +G NL++KNL D ++DE+LK FS FGTITS K+M D+ G SKG GF ++ PEEA +
Sbjct: 346 KYQGVNLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANK 405
Query: 366 ALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGA 422
A+ EMN +M+ KPLYVA+AQRKE R+++L+AQ Q R ++ A+GIP +GA
Sbjct: 406 AVTEMNQRMLAGKPLYVALAQRKEVRRSQLEAQIQARNQFRLQQQVAA-AAGIPAVQYGA 464
Query: 423 PRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQR--QVHPGQRT 480
GP L YG PG P AA G + PG P Y L +V PG
Sbjct: 465 --TGP--LIYG---PGGYPIPAAVNGRGMPMVPGHNGPMPMYPGMPPLSSLLEVRPGY-P 516
Query: 481 GVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPV--PFEVSGMPATPVET 538
G+ G +P M S VP P E +PA P
Sbjct: 517 GMNARGPVPAQGRPMMMPGS---------------------VPSAGPAEAEAVPAVP--- 552
Query: 539 PRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLH 598
+P + LA+ + R ++LGE LYP V E + K+TGMLLEM +E+L
Sbjct: 553 ----GMPERFTAADLAAVPEESRKQVLGELLYPKVFVREEKLSGKITGMLLEMPNSELLE 608
Query: 599 LIESPEALKTKVAEAMAVLQ 618
L+E AL +V EA+ VLQ
Sbjct: 609 LLEDDSALNERVNEAIGVLQ 628
>gi|242802487|ref|XP_002483981.1| polyadenylate-binding protein [Talaromyces stipitatus ATCC 10500]
gi|218717326|gb|EED16747.1| polyadenylate-binding protein [Talaromyces stipitatus ATCC 10500]
Length = 751
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 290/705 (41%), Positives = 387/705 (54%), Gaps = 104/705 (14%)
Query: 8 AATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRS 67
A A + A T P+ + SLYVG+L+ +V E+ L++LFS + QV S+RVCRD R
Sbjct: 30 APDTATSDAATTPNPNQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRR 89
Query: 68 SLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSI 127
SLGYAYVNY+N D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLDT+I
Sbjct: 90 SLGYAYVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAI 149
Query: 128 DNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVY 187
DNKAL DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+NDK+V+
Sbjct: 150 DNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVF 209
Query: 188 VGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK 245
VG + +++R + + FTNVYV N+ VTDE+ +++FG +G ITSA + +D GK
Sbjct: 210 VGHHISKKDRQSKFEEMKANFTNVYVKNIDPEVTDEEFRELFGKYGDITSATISRDDSGK 269
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYE 305
SR FGFVN+ A +AV++LN + + YVGRAQK+ ERE +LR ++E R+ +
Sbjct: 270 SRGFGFVNYVDHQNAQSAVDELNDKDFHSQKLYVGRAQKKHEREEELRRQYEAARLEKAS 329
Query: 306 KLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGF----------------- 348
K +G NLY+KNL D ++D+KL+ELFS FGTITS KVM D G
Sbjct: 330 KYQGVNLYVKNLTDDVDDDKLRELFSPFGTITSAKVMRDTVGVSSDSDKEEGKEASEKEG 389
Query: 349 -------------------------------SKGSGFAAFSMPEEATRALNEMNGKMIGR 377
SKG GF FS P+EA++A+ EMN +M+
Sbjct: 390 EEASEKEETKVKAEDEEKTETKKPEKKVFGKSKGFGFVCFSSPDEASKAVTEMNQRMVNG 449
Query: 378 KPLYVAVAQRKEERKARLQAQF-AQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGT 436
KPLYVA+AQRK+ RK++L+A A+ + A+G+P P + P ++YG G
Sbjct: 450 KPLYVALAQRKDVRKSQLEASIQARNTIRQQQAAAAAGMP-----QPYMQP-AVFYGPGQ 503
Query: 437 PGLMPPQAA--GYGFQQQV------FPGLRP---------------GGPNYIMPYHLQR- 472
G +P A G GF Q PG RP GGPN +P + +
Sbjct: 504 QGFLPANAGQRGLGFAPQPGMVMAGIPGGRPGQYPGGFPQQGGRGIGGPNQQIPQNFGQG 563
Query: 473 ------QVHPGQRTGVRRSGNTHQMQQPQFMRNSN------QGI------RYLDNARNGT 514
Q PG G+ QM Q QF R + QGI
Sbjct: 564 IPIGAMQAGPG---GIPNGMAYPQMAQVQFGRGAGGRGQVPQGIPPNVGGPRGGPGFGQG 620
Query: 515 DQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVE 574
+ +PA P P ++ T L++A P + +MLGE LYP ++
Sbjct: 621 RGGMPPRPGPGGRGQNVPAGAPVAPEGAPGSLTLQT--LSAAPPQQQKQMLGEALYPKIQ 678
Query: 575 NIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
+P A K+TGMLLEMD E+L LI+ AL+ KV EA+ V E
Sbjct: 679 AQQPELAGKITGMLLEMDNAELLGLIDDESALRAKVDEALHVYDE 723
>gi|115390925|ref|XP_001212967.1| polyadenylate-binding protein [Aspergillus terreus NIH2624]
gi|121739603|sp|Q0CR95.1|PABP_ASPTN RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|114193891|gb|EAU35591.1| polyadenylate-binding protein [Aspergillus terreus NIH2624]
Length = 753
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 286/682 (41%), Positives = 389/682 (57%), Gaps = 96/682 (14%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ +V E+ LY+LFS + QV S+RVCRD R SLGYAYVNY+N D A
Sbjct: 47 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 106
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I GKP RIM+S RDP++RK+G GNVFIKNLD +IDNKAL DTFAAFG +LSCK
Sbjct: 107 EDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCK 166
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA D G SKGYGFV +E EAA NAIK +NGML+NDK+V+VG + +++R + +
Sbjct: 167 VAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKA 226
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTNVY+ NL + +++E+ +++F FG ITSA + +D +GKSR FGFVN+ + D+A AAV
Sbjct: 227 NFTNVYIKNLDQEISEEEFRQMFEKFGEITSATLSRDQEGKSRGFGFVNYSTHDSAQAAV 286
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
+++N + YVGRAQK+ ERE +LR ++E R+ + K +G NLY+KNL D I+DE
Sbjct: 287 DEMNDKEVKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDE 346
Query: 325 KLKELFSEFGTITSCKVMVDQH-------------------------------------- 346
KL+E+F+ +GTITS KVM D +
Sbjct: 347 KLREMFAPYGTITSAKVMRDTNIERTQTPDSDKEKKEESKEEKPEAAEKTEEAAKESGDD 406
Query: 347 -------------GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
G SKG GF FS P+EA++A+ EMN +MI KPLYVA+AQRK+ R++
Sbjct: 407 QDKENKKSDKKVLGKSKGFGFVCFSSPDEASKAVTEMNQRMINGKPLYVALAQRKDVRRS 466
Query: 394 RLQAQF-AQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMP-PQAAGYGFQQ 451
+L+A A+ + A+G+P P + P ++YG G G +P Q G F
Sbjct: 467 QLEASIQARNTIRQQQAAAAAGMP-----QPYMQP-AVFYGPGQQGFIPGGQRGGLPFAP 520
Query: 452 QV-----FPGLRPG---------------GPNYIMPYHLQRQVHPGQR--TGVRRSGNTH 489
Q PG RPG GPN +P + + + G G+
Sbjct: 521 QPGMMMGVPGGRPGQYPGPFPGQQGGRGMGPNQQIPPNFAQGIPMGAMGPGGIPNGMGYP 580
Query: 490 QMQQPQFMRNSN-----QGIRYLDNARNGTDQSVVSMVPVPFEV------SGMPATPVET 538
QM Q QF R + G+ R VPV ++ G A P
Sbjct: 581 QMGQVQFGRGAGGRGQVPGMPMGQGMRGPGYGQGRGGVPVQGQMRPGQGGRGQNAQPAAG 640
Query: 539 PRPVPVPISTLTS-ALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVL 597
R P + LT+ +LA+A + +MLGE LYP ++ +P A K+TGMLLEMD TE+L
Sbjct: 641 -RGEEAPAAGLTAQSLAAAPAPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNTELL 699
Query: 598 HLIESPEALKTKVAEAMAVLQE 619
L+E EAL+ KV EA++V E
Sbjct: 700 SLLEDDEALRAKVDEALSVYDE 721
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 166/350 (47%), Gaps = 72/350 (20%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D+ S GY +V+Y + A
Sbjct: 133 TGQGNV--FIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSK-GYGFVHYETAEAA 189
Query: 83 ANAKEALNFMPINGKPIRIMY--SHRDPSIR----KSGYGNVFIKNLDTSIDNKALCDTF 136
NA + +N M +N K + + + S +D + K+ + NV+IKNLD I + F
Sbjct: 190 NNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDQEISEEEFRQMF 249
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG + S ++ D G+S+G+GFV + ++AQ A+ +N + +++YVG ++ E
Sbjct: 250 EKFGEITSATLSRDQEGKSRGFGFVNYSTHDSAQAAVDEMNDKEVKGQKLYVGRAQKKHE 309
Query: 197 RAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD- 243
R ++ + K+ N+YV NL + + DE L+++F +GTITSA VM+D++
Sbjct: 310 REEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEKLREMFAPYGTITSAKVMRDTNI 369
Query: 244 --------------------------------------------------GKSRCFGFVN 253
GKS+ FGFV
Sbjct: 370 ERTQTPDSDKEKKEESKEEKPEAAEKTEEAAKESGDDQDKENKKSDKKVLGKSKGFGFVC 429
Query: 254 FQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
F SPD A+ AV ++N N K YV AQ++ R + L A + R
Sbjct: 430 FSSPDEASKAVTEMNQRMINGKPLYVALAQRKDVRRSQLEASIQARNTIR 479
>gi|430814566|emb|CCJ28224.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 685
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 285/664 (42%), Positives = 392/664 (59%), Gaps = 92/664 (13%)
Query: 2 EATGAAAATAAVTSATTAAVPSGYGN---VSLYVGDLEQNVNESQLYDLFSQVAQVVSVR 58
EA G+A + +++ + VP N SLYVG+L+ +V E+ L++LF+ + V S+R
Sbjct: 42 EAAGSADDPSRLSAGANSGVPVSQNNSNSASLYVGELDPSVTEAMLFELFNNIGAVASIR 101
Query: 59 VCRDQSKRSSLGYAYVNYSNPQD-----AANAKEALNFMPINGKPIRIMYSHRDPSIRKS 113
VCRD R SLGYAYVN+ N D A + LN+ I GKP RIM+S RDPS+RK+
Sbjct: 102 VCRDAVTRRSLGYAYVNFHNSSDVNLLTGERALDELNYTLIKGKPCRIMWSQRDPSLRKT 161
Query: 114 GYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAI 173
G GNVFIKNLD SIDNKAL DTF AFG++LSCKVA+D G SKGYGFV ++ E+A+ AI
Sbjct: 162 GTGNVFIKNLDASIDNKALHDTFTAFGSILSCKVAVDELGNSKGYGFVHYKTSESAEAAI 221
Query: 174 KMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFG 231
K VYVG V +++R + ++ KFTNVYV N+ +++ + +++F FG
Sbjct: 222 K----------HVYVGHHVSKKDRQSKFDDMKLKFTNVYVKNIDPEISEAEFEELFKKFG 271
Query: 232 TITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
+TS + D +GKSR FGFVN+++ + AA AVE+L+ T D+ YV RAQK+ ERE +
Sbjct: 272 NVTSLSLSVDENGKSRGFGFVNYENHEDAARAVEELHDTEYKDRKLYVCRAQKKHEREEE 331
Query: 292 LRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKG 351
LR ++EQ ++ + K G NL++KNLDD I+DE+L++ FS +GTITS K+MVD +G SKG
Sbjct: 332 LRKQYEQAKLDKLNKYNGINLFVKNLDDDIDDERLRQEFSIYGTITSAKIMVDDNGKSKG 391
Query: 352 SGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFA---QIR----- 403
GF FS P+EAT+A+ EMN +M+ KPLYVA+AQRK+ R+++L++Q Q+R
Sbjct: 392 FGFVCFSSPDEATKAITEMNQRMVSGKPLYVALAQRKDVRRSQLESQINARNQLRIQQQA 451
Query: 404 APGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPP---QAAGYGFQQQVFPGLRPG 460
A GMSP G+PG AP ++YGQG G MP G F Q P + P
Sbjct: 452 AAAGMSP-QYGMPG----AP------MFYGQGPTGFMPAGPMTDRGMPFPQ---PAMVPS 497
Query: 461 GPNYIMPYHLQ------RQVHPG--------------QRTGV--RRSGNTHQMQQPQFMR 498
P ++ Q Q++PG QR+G R G + P MR
Sbjct: 498 RPRWVPQQSGQPNGQAISQIYPGMSGYNAYLAIQGRSQRSGQVPRPQGIPSRPMMPMAMR 557
Query: 499 ---NSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALAS 555
S + R N RNGT + V ++LA+
Sbjct: 558 PLLGSTRMYRVGSNTRNGTKDGI----------------------DVGSDDLLTAASLAA 595
Query: 556 ASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMA 615
ASP+++ +MLGE LYP V+ EP A K+TGMLLEMD +E+LHLIE AL+ KV EA+
Sbjct: 596 ASPENQKQMLGEVLYPKVQAQEPGFAGKITGMLLEMDNSELLHLIEDDVALRAKVEEALI 655
Query: 616 VLQE 619
VL+E
Sbjct: 656 VLKE 659
>gi|312067233|ref|XP_003136646.1| hypothetical protein LOAG_01058 [Loa loa]
gi|307768188|gb|EFO27422.1| hypothetical protein LOAG_01058 [Loa loa]
Length = 655
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 279/654 (42%), Positives = 383/654 (58%), Gaps = 55/654 (8%)
Query: 11 AAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLG 70
A V +A PS Y SLYVGDL +V E+ L++ FS V+S+RVCRD R SLG
Sbjct: 2 ATVATAGAGMTPS-YPMASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLG 60
Query: 71 YAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNK 130
YAYVN+ P DA A + +NF + GKPIRIM+S RDPS+R+SG GN+FIKNLD SIDNK
Sbjct: 61 YAYVNFQQPADAERALDTMNFDMMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNK 120
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
A+ DTF+ FG +LSCKVA D SKGYGFV FE EE+AQ AI+ +NGML+ K+VYVG
Sbjct: 121 AIYDTFSMFGNILSCKVANDEESNSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGK 180
Query: 191 FVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRC 248
F R R ++ + +FTNVY+ N A+ + E L+K+F FG ITSA VM D+DGKS+
Sbjct: 181 FQPRTARLREMGETARRFTNVYIKNFADELDKEALEKLFSKFGKITSAAVMVDADGKSKG 240
Query: 249 FGFVNFQSPDAAAAAVEKLNGTT--NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK 306
FGFV F++P+ A AV +++ ++ YV RAQK+ ER A+L+ ++EQ+++ R ++
Sbjct: 241 FGFVAFENPEDAEKAVTEMHEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQR 300
Query: 307 LKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRA 366
+G NLY+KNLDD++ND+ LK+ F +G ITS KVM D +G SKG GF F P+EAT+A
Sbjct: 301 YQGVNLYVKNLDDTVNDDILKQNFEAYGKITSAKVMCDDNGRSKGFGFVCFEKPDEATKA 360
Query: 367 LNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLG 426
+ EMNGKM+ KPLYVA+AQRKE+RKA+L +Q+ Q A M A +PG + P G
Sbjct: 361 VTEMNGKMMCTKPLYVALAQRKEDRKAQLASQYMQRLASIRMHN-AGSMPGTVY-TPGTG 418
Query: 427 ---------------PQQLYYGQGTPGLMPPQ-----AAGYGFQQQVF-----------P 455
P G G P AAG+G Q
Sbjct: 419 GFFVSSTLQNQRAFMPTATIPGAQMRGTTPRWNTIGAAAGFGVQSPYMVQSGAYGQGGRG 478
Query: 456 GLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQ-------MQQPQFMRNSNQGIRYLD 508
G RP + + Q+ + + GV R G Q M Q Q R+ G R
Sbjct: 479 GTRPTASSAAVAMRAQQGQYGPAQAGVTRGGPQAQRMAAGGAMVQNQGTRSQQMGGRQAQ 538
Query: 509 NARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPV----PISTLTSALASASPDDRTRM 564
+ Q + S ++G P + + P++ LA A P ++ +M
Sbjct: 539 PGKPSQGQMMYSSYSA---ITGRPGQVQSQQNSIVIQGQEPLT--AHMLAQALPQEQKQM 593
Query: 565 LGEQLYPLVENI-EPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVL 617
LGE++YPL+E I + K+TGM+LEMD +E+L ++E+ E L++KV+EA +VL
Sbjct: 594 LGERIYPLIERIYQGPDVGKITGMMLEMDNSELLMMLENEELLQSKVSEAASVL 647
>gi|313229163|emb|CBY23748.1| unnamed protein product [Oikopleura dioica]
Length = 570
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 276/602 (45%), Positives = 375/602 (62%), Gaps = 54/602 (8%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL ++ E+ LYD F V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I GKPIRIM+S RDPS+R+SG GNVFIKNLD SIDNKAL DTF++FG +LSCKV
Sbjct: 63 MNFDVIKGKPIRIMWSQRDPSLRRSGQGNVFIKNLDRSIDNKALYDTFSSFGNILSCKVV 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D NG SKG+GFV +E++E+AQ AI+ +NGML+ DK+V+V F R +R ++ + + F
Sbjct: 123 CDING-SKGFGFVHYESDESAQRAIEKVNGMLMEDKKVFVARFKSRNDRMREFGDAAKHF 181
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITS-AIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
TN++V NL ++ + L K F FG + S ++ ++ G S+C GF++F+ D A AAVE
Sbjct: 182 TNLFVKNLPDSWDTDALLKNFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVE 241
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDDSIN 322
++ K Y GRAQK+AER ++L+AK+E QERI RY+ G NLY+KNLDDSI+
Sbjct: 242 IMHEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERIQRYQ---GVNLYVKNLDDSID 298
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE L+E F +FG ITS KV+ D +G SKG GF FS PEEAT+A+ EMNG++ G KPLYV
Sbjct: 299 DEGLREAFKQFGNITSAKVITDLNGRSKGFGFVCFSSPEEATKAVTEMNGRIFGGKPLYV 358
Query: 383 AVAQRKEERKARLQAQFAQIRAPGGM---SPLASGIPGYHHGAPRLGPQQLYYGQGTPGL 439
+AQRKE+RKA LQ Q+ Q R G+ + + + + + PR L QG P
Sbjct: 359 GLAQRKEDRKAHLQQQYMQ-RVSTGIRMQAFMGNQVVNQNFQPPRY---ILPTMQGQPVQ 414
Query: 440 MPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRN 499
M PQ P +R P + P QR PG VR G Q PQF
Sbjct: 415 MFPQGT---------PMVR-ATPRWAPPN--QRVQMPGM---VR--GRMAQQGGPQF--- 454
Query: 500 SNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPV--PVPISTLTSALASAS 557
R + RN V +P EV MP +P P + +S LA+A+
Sbjct: 455 -----RLTPSVRN---------VQIPSEVIQMPPQMPHQNQPAGDQAPETLTSSMLANAN 500
Query: 558 PDDRTRMLGEQLYPLVENIEPVH-ASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAV 616
P ++ +MLGE+L+PL++++ A K+TGMLLE+D +E+LH++++ E LK+KV EA+ V
Sbjct: 501 PQEQKQMLGERLFPLIQSMAATDLAGKITGMLLEIDNSELLHMLDNRELLKSKVDEAVLV 560
Query: 617 LQ 618
L+
Sbjct: 561 LK 562
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LYV +L+ ++++ L + F Q + S +V D + RS G+ +V +S+P++A
Sbjct: 283 YQGVNLYVKNLDDSIDDEGLREAFKQFGNITSAKVITDLNGRSK-GFGFVCFSSPEEATK 341
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKAL 132
A +N GKP+ + + R RK+ +++ + T I +A
Sbjct: 342 AVTEMNGRIFGGKPLYVGLAQRKED-RKAHLQQQYMQRVSTGIRMQAF 388
>gi|350408508|ref|XP_003488428.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3 [Bombus
impatiens]
Length = 601
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 285/641 (44%), Positives = 371/641 (57%), Gaps = 85/641 (13%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD +IDNKA+ DTF+AFG +LS
Sbjct: 68 ALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA D +G SKGYGFV FE EEAA +I +NGML+N K+
Sbjct: 128 CKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKK------------------- 168
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
N E +TD+ LK +F +GTITS VM DGKSR FGFV F+ PDAA AV
Sbjct: 169 --------NFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAV 220
Query: 265 EKLNGT-TNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIND 323
+LNG K YVGRAQK+AER+ +L+ KFEQ ++ R + +G NLY+KNLDDSI+D
Sbjct: 221 LELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDD 280
Query: 324 EKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVA 383
E+L++ F+ FGTITS KVM+++ G SKG GF FS PEEAT+A+ EMNG++I KPLYVA
Sbjct: 281 ERLRKEFAPFGTITSAKVMMEE-GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVA 339
Query: 384 VAQRKEERKARLQAQF------------AQIRAPGGMSPLASGIPGYHHGAPRLGPQQLY 431
+AQRKE+RKA L +Q+ QI PGG +P GP Q+
Sbjct: 340 LAQRKEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYF--VPTIPQPQRFYGPAQMA 397
Query: 432 YGQGTPGLMPPQ-----------AAGYGFQQQVF------PGLRPGGPNYIMPYHLQRQV 474
+ TP P Q ++G+ Q F P +PG M L +
Sbjct: 398 QIRTTP-RWPAQPNQVRPNAQTGSSGFATMQGPFRAAPRAPTAQPGA----MRSTLSARP 452
Query: 475 HPGQRTGVRRSGNTHQMQQPQF-----MRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVS 529
GQ+T + M P R SN +Y N RN P +
Sbjct: 453 ITGQQTVGGANMQNRSMAGPAVGVTAQSRPSN--YKYTSNMRN------------PPQAM 498
Query: 530 GMPA-TPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGML 588
+PA TPV+ + S LA+A P ++ +MLGE+L+PL++ + P K+TGML
Sbjct: 499 AIPAPTPVQQAVHIQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGML 558
Query: 589 LEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEK 629
LE+D +E+LH++E E+LK KV EA+AVLQ A+ V K
Sbjct: 559 LEIDNSELLHMLEHNESLKAKVEEAVAVLQAHQAKQAVASK 599
>gi|82802759|gb|ABB92430.1| PABP3 [Chlorocebus sabaeus]
Length = 635
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 271/624 (43%), Positives = 376/624 (60%), Gaps = 46/624 (7%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS+ ++S+RVCRD R YAYVN+ +P+DA
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRYSSYAYVNFQHPKDAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+R+SG GN+F+KNLD SI+NK L DT +AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTASAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +F NVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + + NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L ++ Q +RA P G + +P + A
Sbjct: 366 ALAQRKEERQAHLTNEYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAVPQTQNRAAYY 423
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRS 485
P Q+ + +P A + FQ + +RP P +P+ R + V R
Sbjct: 424 PPSQIAQLRPSPCWTAQGARPHPFQNKP-SAIRPAAPR--VPFSTMRPTS----SQVPRV 476
Query: 486 GNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGM----------PATP 535
+T ++ S Q + A V VP +G+ P
Sbjct: 477 MSTQRVAN-----TSTQTVGPRPAAAAAAATPAVRTVPRYKYAAGVRNPQQHLNAQPQVT 531
Query: 536 VETPRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQT 594
++ P TLT S LASA P ++ +MLGE+L+ ++ + P A K+TGMLLE+D +
Sbjct: 532 MQQPAVHVQGQETLTASMLASAPPQEQKQMLGERLFRPIQAMHPTLAGKITGMLLEIDNS 591
Query: 595 EVLHLIESPEALKTKVAEAMAVLQ 618
E+LH++ES ++L++KV EA+AVLQ
Sbjct: 592 ELLHMLESSQSLRSKVDEAVAVLQ 615
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 168/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D + Y +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRYSSYAYVNFQH 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
+ A+ A+ +N +I K V + R + V N++V NL +++ ++ L
Sbjct: 62 PKDAERALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVG----NIFVKNLDKSINNKVLYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TASAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|119596297|gb|EAW75891.1| hCG2019100, isoform CRA_e [Homo sapiens]
Length = 617
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 263/599 (43%), Positives = 371/599 (61%), Gaps = 24/599 (4%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SGY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 6 SGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF + G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +
Sbjct: 66 ERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNI 125
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKVA D +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F R+ER +
Sbjct: 126 LSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAELG 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +FTN+YV NL V ++ L+ +F FG + S VM+D+ G SRCFGFVNF+ + A
Sbjct: 185 ARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEA 244
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
AV +NG + ++ Y GRAQKR ER+ +L+ +FEQ + R + +G NLY+KNLDDS
Sbjct: 245 QKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDS 304
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
I+D+KL++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG+++G KPL
Sbjct: 305 IDDDKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 363
Query: 381 YVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPG--------YHHGAPRLGPQQLYY 432
YVA+AQRKEERKA L Q+ Q + M L++ + G + P+ Q YY
Sbjct: 364 YVALAQRKEERKAILTNQYMQRLS--TMRTLSNPLLGSFQQPSSYFLPAMPQPPAQAAYY 421
Query: 433 GQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ 492
G G + P Q A Q P ++ + + P + VR++
Sbjct: 422 GCGP--VTPTQPAPRWTSQPPRPSC-----ASMVRPPVVPRRPPAHISSVRQASTQVPRT 474
Query: 493 QPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVP-ISTLTS 551
P R +N G + + G ++P + V+ P V +P LT+
Sbjct: 475 VPHTQRVANIGTQTTGPSGVGCCTPGRPLLPCKCSSAAHSTYRVQEP-AVHIPGQEPLTA 533
Query: 552 ALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTK 609
++ +A+P ++ +M+GE+LYPL+ ++ A K+TGMLLE+D +E+L ++ESPE+L K
Sbjct: 534 SMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAK 592
>gi|328782034|ref|XP_396057.4| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Apis
mellifera]
Length = 601
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 277/629 (44%), Positives = 370/629 (58%), Gaps = 61/629 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD +IDNKA+ DTF+AFG +LS
Sbjct: 68 ALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA D +G SKGYGFV FE EEAA +I +NGML+N K+
Sbjct: 128 CKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKK------------------- 168
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
N E +TD+ LK++F +GTITS VM DGKSR FGFV F+ PDAA AV
Sbjct: 169 --------NFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAV 220
Query: 265 EKLNGT-TNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIND 323
+LNG K YVGRAQK+AER+ +L+ KFEQ ++ R + +G NLY+KNLDDSI+D
Sbjct: 221 LELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDD 280
Query: 324 EKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVA 383
E+L++ F+ FGTITS KVM+++ G SKG GF FS PEEAT+A+ EMNG++I KPLYVA
Sbjct: 281 ERLRKEFAPFGTITSAKVMMEE-GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVA 339
Query: 384 VAQRKEERKARLQAQF------------AQIRAPGGMSPLASGIPGYHHGAPRLGPQQLY 431
+AQRKE+RKA L +Q+ QI PGG +P GP Q+
Sbjct: 340 LAQRKEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYF--VPTIPQPQRFYGPAQMA 397
Query: 432 YGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIM---PYHLQRQVHPGQRTGVRRSGNT 488
+ TP P Q QV P + G + P+ + Q +R + +
Sbjct: 398 QIRTTP-RWPAQP------NQVRPNAQTGSSGFATMQGPFRAAPRAPTAQAGTMRNTLSA 450
Query: 489 HQMQQPQFMRNSNQGIRYLDNARNG-------TDQSVVSMVPVPFEVSGMPA-TPVETPR 540
+ Q + +N R + G ++ S + P + +PA TPV+
Sbjct: 451 RPITGQQAVGGANMQNRSMAGPAVGVSAQSRPSNYKYTSNMRNPPQAMAIPAPTPVQQAV 510
Query: 541 PVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLI 600
+ S LA+A P ++ +MLGE+L+PL++ + P K+TGMLLE+D +E+LH++
Sbjct: 511 HIQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSELLHML 570
Query: 601 ESPEALKTKVAEAMAVLQEAAARSDVNEK 629
E E+LK KV EA+AVLQ A+ V K
Sbjct: 571 EHNESLKAKVEEAVAVLQAHQAKQAVASK 599
>gi|47217896|emb|CAG05018.1| unnamed protein product [Tetraodon nigroviridis]
Length = 558
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 265/580 (45%), Positives = 355/580 (61%), Gaps = 58/580 (10%)
Query: 48 FSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRD 107
FS ++S+RVCRD R SLGYAYVN+ P DA A + +NF I G+P+RIM+S RD
Sbjct: 18 FSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPLRIMWSQRD 77
Query: 108 PSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEE 167
PS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LSCKV D NG SKGYGFV FE E
Sbjct: 78 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETHE 136
Query: 168 AAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKK 225
AA+ AI+ +NGML+ND++V+VG F R+ER + + +FTNVY+ N E + DE LK+
Sbjct: 137 AAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKE 196
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
+F +G S VM D GKS+ FGFV+F+ + A AV+ +NG N + YVGRAQK+
Sbjct: 197 LFSKYGPALSIRVMTDDSGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKK 256
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
ER+ +L+ KFEQ + R + +G NLY+KNLDD ++DE+L++ FS FGTITS KVM++
Sbjct: 257 GERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMME- 315
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAP 405
G SKG GF FS PEEAT+A+ EMNG+++ KPLYVA+AQRKEER+A L Q+ Q A
Sbjct: 316 GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMA- 374
Query: 406 GGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYI 465
+P P L P Q P +GY F P N
Sbjct: 375 -----TVRAVPN-----PVLNPYQ-----------PAPPSGY------FMAAIPQTQNRA 407
Query: 466 MPYHLQR--QVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVP 523
Y + Q+ P R R H + +RN Q + Q V+M
Sbjct: 408 AYYSANQLAQLRPSPRWNDSREC-AHSYKYAAGVRNPQQHM---------ASQPQVAM-- 455
Query: 524 VPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASK 583
PA V+ P+ S LASA P ++ +MLGE+L+PL++++ P A K
Sbjct: 456 ------QQPAVLVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQDVHPSLAGK 503
Query: 584 VTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAAR 623
+TGMLLE+D +E+LH++ESPE+L++K+ EA+AVLQ A+
Sbjct: 504 ITGMLLEIDNSELLHMLESPESLRSKMDEAVAVLQAHQAK 543
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 110/205 (53%), Gaps = 25/205 (12%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + +++++ +L +LFS+ +S+RV D S +S G+ +V++ +DA A +
Sbjct: 178 TNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDDSGKSK-GFGFVSFERHEDAQKAVD 236
Query: 88 ALNFMPINGKPIRIMYSHR-----------------DPSIRKSGYGNVFIKNLDTSIDNK 130
+N +NG+ + + + + D R G N+++KNLD +D++
Sbjct: 237 DMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGV-NLYVKNLDDGLDDE 295
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L F+ FGT+ S KV ++ G+SKG+GFV F + E A A+ +NG ++ K +YV L
Sbjct: 296 RLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 354
Query: 191 FVRRQERAQQNVSPKFTNVYVNNLA 215
R++ER TN Y+ +A
Sbjct: 355 AQRKEERQAH-----LTNQYMQRMA 374
>gi|348563863|ref|XP_003467726.1| PREDICTED: polyadenylate-binding protein 1-like [Cavia porcellus]
Length = 613
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 272/615 (44%), Positives = 380/615 (61%), Gaps = 41/615 (6%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
GY SLYVGDL +V E+ LY+ FS V ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 7 GYPLSSLYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAE 66
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A + +NF I G+PIRIM+S RDP +RKSG GNVFIKNL+ SID+KAL DTF+ FG +L
Sbjct: 67 RALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNVFIKNLEDSIDSKALYDTFSTFGNIL 126
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--N 201
SCKVA D +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F ++ER +
Sbjct: 127 SCKVACDEHG-SRGFGFVHFETNEAAQQAIGTMNGMLLNDRKVFVGHFKSQREREAELGA 185
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
+ +FTN+YV NL+ + ++ L+ +F FG + S VM+D+ G SR FGFVNF+ + A
Sbjct: 186 QALEFTNIYVKNLSVDMDEQGLQDLFFAFGNMLSVKVMRDNSGHSRGFGFVNFEKHEEAQ 245
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV+ +NG + + YVGRAQKRAER+ +L+ +FEQ + R + +G NLY+KNLDDSI
Sbjct: 246 KAVDHMNGKEVSGQQLYVGRAQKRAERQNELKRRFEQLKQDRQTRYRGVNLYVKNLDDSI 305
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DEKL+ +FS +G ITS KVM + SKG GF FS PEEAT+A+ EMNG ++G KPLY
Sbjct: 306 SDEKLRTVFSPYGVITSAKVMTEG-DHSKGFGFVCFSSPEEATKAVTEMNGCIVGTKPLY 364
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTP-GLM 440
VA+AQRKEERKA L Q+ ++ + L+ P LG Q P G
Sbjct: 365 VALAQRKEERKAILTNQY--MKRLSTVQALSR---------PVLGSFQQPNSYFLPTGAQ 413
Query: 441 PP-QAAGYGFQQQVFP----------GLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTH 489
PP QA G V P RP + + P L R+ + VR++
Sbjct: 414 PPAQAPCCGSSGSVAPVQPAPRWTAQPQRPSTASVVRPPGLPRRPQ-ANVSSVRQASTQV 472
Query: 490 QMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVS-----GMPATPVETPRPVPV 544
P + +N G + + A T+ S++P + G+P V P P
Sbjct: 473 PHLAPHTKKVANIGTQTMGRAACSTEGP--SLLPCTCSSTVHIAHGVPEPAVHVPGQEP- 529
Query: 545 PISTLTSALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESP 603
LT+++ +A+P ++ +M+GE+LY L+ + A K+TGMLLE+D +++L ++ESP
Sbjct: 530 ----LTASMLAAAPLHEQKQMIGERLYHLIPEVYASLAGKITGMLLEIDNSDLLLMLESP 585
Query: 604 EALKTKVAEAMAVLQ 618
E+L+ K+ EA+AVLQ
Sbjct: 586 ESLQAKIEEAVAVLQ 600
>gi|307103841|gb|EFN52098.1| hypothetical protein CHLNCDRAFT_59028 [Chlorella variabilis]
Length = 634
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/404 (57%), Positives = 304/404 (75%), Gaps = 11/404 (2%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
N SLYVGDL+++V E+QL+++FSQ+ V S+RVCRD R SLGYAYVNY++ D A A+
Sbjct: 37 NSSLYVGDLDRDVTEAQLFEVFSQIGPVASIRVCRDAVTRRSLGYAYVNYNSVLDPAAAE 96
Query: 87 EAL---NFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
AL N+ P+ G+P+RIM+SHRDP+ RKSG GN+FIKNLD S+DNKAL DTF+AFG +L
Sbjct: 97 RALDQLNYTPLVGRPMRIMWSHRDPAFRKSGVGNIFIKNLDRSVDNKALHDTFSAFGNIL 156
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS 203
SCKVA D G+SKGYGFV FE +E+A+ AI+ +NGML+ K+VYVG F+RR ER+ +
Sbjct: 157 SCKVAQDLKGESKGYGFVHFEKDESARLAIEKVNGMLLEGKKVYVGPFLRRSERSSDS-E 215
Query: 204 PKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAA 263
KFTNV+V NL E V+D+++K +F GT+ S I+M+D +GKS+ FGF+NF+ P+ AA+A
Sbjct: 216 VKFTNVFVKNLDEAVSDDEVKAMFAEHGTVNSCIIMRDDEGKSKGFGFINFEEPEQAASA 275
Query: 264 VEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIND 323
V+ LNG N K YVGRAQK+AEREA LRAKFE+ R R K +G NLY+KNL D I+D
Sbjct: 276 VQALNGKDVNCKELYVGRAQKKAEREAMLRAKFEELRSERIAKYQGMNLYVKNLHDDIDD 335
Query: 324 EKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVA 383
E L+ FS+FGTITS KVMVD G S+G GF ++ PEEATRA+ EMNG+MI KP+YVA
Sbjct: 336 ETLRTEFSQFGTITSAKVMVDSAGKSRGFGFVCYASPEEATRAVTEMNGRMIKGKPIYVA 395
Query: 384 VAQRKEERKARLQAQFAQIRA--PGGMSPLASGI--PGYHHGAP 423
+AQR++ R+A+L+ Q+ Q A PG P+A G+ PG GAP
Sbjct: 396 LAQRRDVRRAQLEQQYQQRVAMPPGPRGPMAPGMFPPG---GAP 436
>gi|367040559|ref|XP_003650660.1| hypothetical protein THITE_2110364 [Thielavia terrestris NRRL 8126]
gi|346997921|gb|AEO64324.1| hypothetical protein THITE_2110364 [Thielavia terrestris NRRL 8126]
Length = 777
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 292/710 (41%), Positives = 394/710 (55%), Gaps = 105/710 (14%)
Query: 6 AAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSK 65
A TA T ++TA P + SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD
Sbjct: 44 AETDTAGPTPSSTAPHPQS--SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVT 101
Query: 66 RSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDT 125
R SLGYAYVNY++ QD A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLD
Sbjct: 102 RRSLGYAYVNYNSTQDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDV 161
Query: 126 SIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQ 185
+IDNKAL DTFAAFG +LSCKVA D NG SKGYGFV +E +EAA AIK +NGML+N+K+
Sbjct: 162 AIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKK 221
Query: 186 VYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
VYVG + +++R + + FTNVYV N+ VT+E+ +++F +G +TS+ + +D++
Sbjct: 222 VYVGYHIPKKDRQSKFEEMKANFTNVYVKNINHEVTEEEFRELFAKYGEVTSSSLARDNE 281
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
GKSR FGFVNF + +AA AVE+LNG + YVGRAQK+ ERE +LR +E R+ +
Sbjct: 282 GKSRGFGFVNFTTHASAAKAVEELNGKEFRGQELYVGRAQKKHEREEELRKSYEAARLEK 341
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD------------------- 344
K +G NLY+KNL D ++D+KL+++FSEFG ITS KVM D
Sbjct: 342 ANKYQGVNLYIKNLADDVDDDKLRQMFSEFGPITSAKVMRDAPPEPPAGSEGDKEGKDKE 401
Query: 345 ------------------------QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
+ G SKG GF FS P++AT+A+ EMN +M+ KPL
Sbjct: 402 NKKESEKEGEGEAAEKKTEKKVERKLGKSKGFGFVCFSNPDDATKAVAEMNQRMVDGKPL 461
Query: 381 YVAVAQRKEERKARLQAQFAQIRAPGGMSPLA--SGIPGYHHGAPRLGPQQLYYGQG-TP 437
YVA+AQRK+ RK++L+A Q R M A +G+P + AP +YY G P
Sbjct: 462 YVALAQRKDVRKSQLEASI-QARNQLRMQQAAAQAGLPQQYMQAP------VYYAPGQQP 514
Query: 438 GLMPPQAAGYGFQQQVF--PGLRPGGPNYIMPYHLQ------RQVHPGQRTGVRRSGNTH 489
G +PP G F Q P ++ G P PY Q Q P G G
Sbjct: 515 GFLPPGGRGMPFPQGGIGMPAVQGGRPGQFPPYAQQGGRGGMPQQLPIYPLGQFPPGTYP 574
Query: 490 QMQQPQFM---RNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVP--- 543
Q PQF+ + Q L R G + +P+P + G P P P
Sbjct: 575 QPNNPQFLAAIQQVQQQAAALGTGRGGPGGRGMQGMPIPQGMPGGPGLAGYPPNGRPQNG 634
Query: 544 --------------------VP-------------ISTLTSALASASP-DDRTRMLGEQL 569
VP + L S LA+ + + ++LGE L
Sbjct: 635 NMAGRGGPNRGGSFAAGRGGVPPAGPVGATGELSATALLQSQLAATTNIHAQKQILGENL 694
Query: 570 YPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
+P ++ I+P A K+TGMLLEMD E++HL+E AL KV EAMAV E
Sbjct: 695 FPKIQAIQPELAGKITGMLLEMDNNELVHLLEDEAALLAKVNEAMAVYDE 744
>gi|126342328|ref|XP_001373103.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 942
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 275/636 (43%), Positives = 381/636 (59%), Gaps = 55/636 (8%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ DA E
Sbjct: 317 SLYVGDLHHDVTEAMLYEKFSPAGPILSIRVCRDMLTRRSLGYAYVNFQQLADAERVLET 376
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+N I GKP+RIM+S RDPS+RKSG GN+FIKNL+ SIDNKAL TF+AFG +LSCKV
Sbjct: 377 MNLDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLEKSIDNKALYKTFSAFGNILSCKVI 436
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D NG SKGYGFV FEN++AA AI+ +NG+ +N+ +VYVG F R+ER + + +F
Sbjct: 437 SDENG-SKGYGFVHFENQQAADKAIEKMNGVRLNNLKVYVGRFKSRKERELELGARAREF 495
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVY+ N E + ++ L ++FG FG S VM D GKS+ FGFV+++ + A AV++
Sbjct: 496 TNVYIKNFGEDMDNDRLTEVFGKFGHALSVKVMTDESGKSKGFGFVSYEKHEDAQRAVDE 555
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
+NG N K YVGRAQK+ ER+ +L+ FEQ + R + +G NLY+KNLDDSI+DE+L
Sbjct: 556 MNGKEFNGKRIYVGRAQKKGERQTELKRHFEQVKQERSSRYQGVNLYVKNLDDSIDDERL 615
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
++ FS FGTITS KVM++ G S+G GF FS PEEA +A++EMNGK++ KPLYVA+AQ
Sbjct: 616 RKAFSPFGTITSAKVMME-GGHSRGFGFVCFSAPEEAAKAVSEMNGKLVATKPLYVALAQ 674
Query: 387 RKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQA-- 444
RK +R+ L Q+ Q A S A P + P P Y+ P PQ+
Sbjct: 675 RKRDRQVHLTNQYMQRMA----SFQAMSNPVFSPYQPP--PTSRYFMTPLPQ---PQSRP 725
Query: 445 AGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRT-GVRRSG----------------- 486
A Y + Q P RP P++ +P + HP Q GV R
Sbjct: 726 AYYPYGQ--IPQFRPSPPHWAVP---GGRFHPFQTVPGVMRPRGPAPAPAPAPFNPVTSS 780
Query: 487 --------NTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVET 538
NT + P ++ R+ + V P ++ MP PV T
Sbjct: 781 SVPVSALMNTQHIVNPSSQMLGPPNPPFMPPMRSVQQYKYAAGVRNPKHLN-MP-LPVTT 838
Query: 539 PRPVPV-----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQ 593
P+P + P++ S LA+ P ++ ++LGE+L+PL++ + P A K+TGMLLE+D
Sbjct: 839 PQPAGLFEFQEPLT--ASMLAATPPQEQKQILGERLFPLIQALNPALAGKITGMLLEIDN 896
Query: 594 TEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEK 629
+E+LH++ESPE+L+ KV EA+AVL+ A+ +K
Sbjct: 897 SELLHMLESPESLQAKVDEAVAVLEAHQAKEAAEKK 932
>gi|171681916|ref|XP_001905901.1| hypothetical protein [Podospora anserina S mat+]
gi|170940917|emb|CAP66567.1| unnamed protein product [Podospora anserina S mat+]
Length = 804
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 290/684 (42%), Positives = 385/684 (56%), Gaps = 92/684 (13%)
Query: 19 AAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSN 78
+A P + SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD R SLGYAYVNY+
Sbjct: 105 SAAPHPQSSASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNA 164
Query: 79 PQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAA 138
D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLD +IDNKAL DTFAA
Sbjct: 165 TADGEKALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAA 224
Query: 139 FGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA 198
FG +LSCKVA D NG SKGYGFV +E +EAA NAIK +NGML+N+K+VYVG + +++R
Sbjct: 225 FGNILSCKVAQDENGNSKGYGFVHYETDEAAANAIKHVNGMLLNEKKVYVGYHIPKKDRQ 284
Query: 199 Q--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQS 256
+ + FTNVYV N+ VTDE+ +++F +G +TS+ + + +GKSR FGFVNF +
Sbjct: 285 SKFEEMKANFTNVYVKNIPAEVTDEEFRELFAKYGDVTSSSLARSDEGKSRGFGFVNFTT 344
Query: 257 PDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
+AA+ AVE+LNG + YVGRAQK+ ERE +LR +E R + K +G NLY+KN
Sbjct: 345 HEAASKAVEELNGKDFRGQELYVGRAQKKHEREEELRRSYEAARQEKANKYQGVNLYIKN 404
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVD-------------------------------- 344
L D ++D+KL+++FSE+G ITS KVM D
Sbjct: 405 LGDDVDDDKLRQMFSEYGPITSAKVMRDSVVESAAEDEKDKENKKEDEEEKEGETAEKKA 464
Query: 345 ------QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQ 398
+ G SKG GF FS P++AT+A+ EMN +MI KPLYVA+AQRK+ RK++L+A
Sbjct: 465 ETKEKRKLGKSKGFGFVCFSNPDDATKAVTEMNQRMIDNKPLYVALAQRKDVRKSQLEAS 524
Query: 399 FAQIRAPGGMSPLA--SGIPGYHHGAPRLGPQQLYYGQG-TPGLMPPQAAGYG--FQQQV 453
Q R M A +GIP + Q +YY G PG MPP A G G F Q
Sbjct: 525 I-QARNQLRMQQAAAQAGIPQ------QFMQQPVYYAPGQQPGFMPP-AGGRGMPFAQGA 576
Query: 454 FPGLRPGG--PNYIMPYHLQ---RQVHPGQRTGVRRSG----NTHQMQQPQFM--RNSNQ 502
G+ P G P PY Q R P Q+ + G N Q PQF+ Q
Sbjct: 577 M-GIPPQGGRPGQYPPYAGQQGGRGGMPPQQMPIYPMGAFPPNFAQPNNPQFLAAMQQIQ 635
Query: 503 GIRYLDNARNGTDQSVVSMVP-VP-FEVSGMP-------------------------ATP 535
+ V M P +P V+G P P
Sbjct: 636 AAAIQGGRGGPGPRGVQGMPPQIPGGPVAGFPPNGRSQNGMGRGAGGNRGGFAGGRGGAP 695
Query: 536 VETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTE 595
P V + T A+ASP + ++LGE L+P ++ I+P A K+TGMLLEM+ E
Sbjct: 696 SAGPADVNIAAVLHTQLAAAASPAQQKQILGESLFPKIQAIQPELAGKITGMLLEMENQE 755
Query: 596 VLHLIESPEALKTKVAEAMAVLQE 619
+++LIE AL KV EAM V E
Sbjct: 756 LINLIEDEAALNAKVGEAMNVYDE 779
>gi|397502367|ref|XP_003821832.1| PREDICTED: polyadenylate-binding protein 1 [Pan paniscus]
Length = 656
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 285/668 (42%), Positives = 385/668 (57%), Gaps = 84/668 (12%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSN----PQ 80
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD + ++ PQ
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDXXXXXXXRWRRSHHPELLPAPQ 67
Query: 81 D----------------AANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLD 124
+ A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD
Sbjct: 68 PGEEVQFCARKIPRVEPSERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLD 127
Query: 125 TSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDK 184
SIDNKAL DTF+AFG +LSCKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND+
Sbjct: 128 KSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDR 186
Query: 185 QVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
+V+VG F R+ER + + +FTNVY+ N E + DE LK +FG FG S VM D
Sbjct: 187 KVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 246
Query: 243 DGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
GKS+ FGFV+F+ + A AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ +
Sbjct: 247 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 306
Query: 303 RYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEE 362
R + +G NLY+KNLDD I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEE
Sbjct: 307 RITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEE 365
Query: 363 ATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ----IRA-------------P 405
AT+A+ EMNG+++ KPLYVA+AQRKEER+A L Q+ Q +RA P
Sbjct: 366 ATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPP 425
Query: 406 GGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNY 464
G + IP + A P Q+ + +P A + FQ PG +RP P
Sbjct: 426 SGY--FMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR- 480
Query: 465 IMPYHLQRQVH---PGQRTGVRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNAR 511
P+ R P + R + + Q P+ +R Q +Y R
Sbjct: 481 -PPFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVR 538
Query: 512 NGTD----QSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGE 567
N Q V+M PA V+ P+ S LASA P ++ +MLGE
Sbjct: 539 NPQQHLNAQPQVTM--------QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGE 584
Query: 568 QLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAAR 623
+L+PL++ + P A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+
Sbjct: 585 RLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQ 644
Query: 624 SDVNEKLG 631
VN G
Sbjct: 645 KAVNSATG 652
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 166/318 (52%), Gaps = 36/318 (11%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSN-------------- 152
+PS ++++ +L + L + F+ G +LS +V D
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDXXXXXXXRWRRSHHPE 61
Query: 153 -------GQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK 205
G+ + + E ++ A+ +N +I K V + R + V
Sbjct: 62 LLPAPQPGEEVQFCARKIPRVEPSERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG-- 119
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
N+++ NL +++ ++ L F FG I S V+ D +G S+ +GFV+F++ +AA A+E
Sbjct: 120 --NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIE 176
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
K+NG ND+ +VGR + R EREA+L A+ ++ N+Y+KN + ++DE+
Sbjct: 177 KMNGMLLNDRKVFVGRFKSRKEREAELGARAKE----------FTNVYIKNFGEDMDDER 226
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
LK+LF +FG S KVM D+ G SKG GF +F E+A +A++EMNGK + K +YV A
Sbjct: 227 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 286
Query: 386 QRKEERKARLQAQFAQIR 403
Q+K ER+ L+ +F Q++
Sbjct: 287 QKKVERQTELKRKFEQMK 304
>gi|221121498|ref|XP_002156904.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Hydra
magnipapillata]
Length = 635
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 266/632 (42%), Positives = 383/632 (60%), Gaps = 61/632 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ L++ FSQ V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPIASLYVGDLNPDVTEAMLFEKFSQTGPVLSIRVCRDLVTRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +N+ PI G+P RIM+S RDP++R+SG GN+FIKNLD +IDNK L D F+AFG +LS
Sbjct: 68 AIDTMNYDPIKGRPCRIMWSQRDPTLRRSGVGNIFIKNLDKNIDNKGLYDAFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CK+A+DS S+GYGFV +E +EAA AI +NGM++NDK+V+VG F+ ++ER ++ +
Sbjct: 128 CKIAVDSKNVSRGYGFVHYETKEAAHEAIAKVNGMMLNDKKVFVGEFMSKRERLEKLGDQ 187
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ KF NV+V N +++ +E LK++FG G ITS +VM +S GKS+ FGFV F++P+AA A
Sbjct: 188 AKKFKNVFVKNFGDSLDEEKLKEMFGKHGEITSCVVMAES-GKSKGFGFVAFEAPEAAEA 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV +LNG + V RAQK+AER +L+++FE +++ R + +G NLY+KNL+D ++
Sbjct: 247 AVNELNGLEIEGRKLVVCRAQKKAERTMELKSRFEAQKMERINRYQGVNLYIKNLEDGLD 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L+ FS +GTITS KVM D+ G SKG GF FS P+EAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRSEFSTYGTITSAKVMKDEKGISKGFGFVCFSSPDEATKAVTEMNGRILVTKPLYV 366
Query: 383 AVAQRKEERKARLQAQFAQIRAP-----GGMSPLA-----SGIPGYHHGAPRLGPQQ--- 429
A+AQRKEER+A+L QF Q P G P A +G PG++ P + Q
Sbjct: 367 ALAQRKEERRAQLSTQFLQRVNPLRYNASGTMPQAGYSFQAGQPGFY--IPTVPTNQRPF 424
Query: 430 -----------LYYGQGTPGLMPPQAAGYGFQQQVFPGLRP------GGPNYI----MPY 468
+ Q +P Q+ G P G PN PY
Sbjct: 425 ITQSVNQITRPRWQSQAPVQQIPANTQYASHVTQIRAGAAPPRPRHQGAPNVARREPAPY 484
Query: 469 H--LQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPF 526
+ + P Q+ +R + Q+ + +Y N RN +
Sbjct: 485 QPGMGTRTMPSQQVPIRPNVPAVAQQRTAY--------KYNPNTRNQ------------Y 524
Query: 527 EVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTG 586
M P + + P ++ LA+A+P ++ +M+GE+L+PLV+ +P A K+TG
Sbjct: 525 PAGQMIGQPDQAAAIIQGPDQLTSTILATATPTEQKQMIGERLFPLVQEFQPHLAGKITG 584
Query: 587 MLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
MLLE+D +E+LH++ES + L+ KV EA+ VLQ
Sbjct: 585 MLLEIDNSELLHMLESRDLLRAKVEEAVQVLQ 616
>gi|71993203|ref|NP_001021709.1| Protein PAB-1, isoform a [Caenorhabditis elegans]
gi|3880681|emb|CAA21572.1| Protein PAB-1, isoform a [Caenorhabditis elegans]
Length = 646
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 284/638 (44%), Positives = 380/638 (59%), Gaps = 61/638 (9%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y SLYVGDL +VNES L++ FS V+S+RVCRD + R SLGYAYVN+ P DA
Sbjct: 27 SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADA 86
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF ++GKP+RIM+S RDP++R+SG GN+FIKNLD IDNK++ DTF+ FG +
Sbjct: 87 ERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNI 146
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQN- 201
LSCKVAID +G SKGYGFV FE EEAAQNAI+ +NGML+ K+V+VG F Q RAQ+N
Sbjct: 147 LSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKF---QPRAQRNR 203
Query: 202 ----VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ +FTNVYV N + E L+K+F FG ITS VM +GKS+ FGFV F +P
Sbjct: 204 ELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVM-TVEGKSKGFGFVAFANP 262
Query: 258 DAAAAAVEKLNGTT--NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLK 315
+ A AV+ L+ +T D +V RAQK++ER A+L+ K EQ + R +K +G NLY+K
Sbjct: 263 EEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVK 322
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI 375
NLD++++D+ LK+ F +G ITS KVM D++G SKG GF F PEEAT A+ EMN KM+
Sbjct: 323 NLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMV 382
Query: 376 GRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQG 435
KPLYVA+AQRKE+R+A+L +Q+ Q A M G Y+ P G YY
Sbjct: 383 CSKPLYVAIAQRKEDRRAQLASQYMQRLASMRMHGNVPGAAMYNPTQPGPG----YY--- 435
Query: 436 TPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQ 495
M Q G QQ V PG R G N Y +Q Q Q GV + ++M +PQ
Sbjct: 436 VANPMQQQRNFAGGQQMVRPGGRWGMQNQ---YPVQNQYMMAQGPGVYQ----NRMGRPQ 488
Query: 496 FMRNSNQGIRYLDNARNGTDQSVVSMVPVP-----------------------FEVSGMP 532
N G R N Q V M P +G
Sbjct: 489 ---NQQGGPRGPPQQYNQVAQGGVRMQGPPRTQNPGVQQQNVPRPPQQQQQQRPAPTGPK 545
Query: 533 ATP----VETPRPVPVPI---STLTSA-LASASPDDRTRMLGEQLYPLVENIEPVH--AS 582
A P RP + I LTSA LA+A+P ++ ++LGE++Y L+E + P H A
Sbjct: 546 APPQPYQAYQQRPQGIVIGGQEPLTSAMLAAAAPQEQKQLLGERIYALIEKLYPGHKDAG 605
Query: 583 KVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEA 620
K+TGM+LE+D +E++ +++ E ++KV EA +VL A
Sbjct: 606 KITGMMLEIDNSELIMMLQDSELFRSKVDEAASVLVSA 643
>gi|118100597|ref|XP_417367.2| PREDICTED: embryonic polyadenylate-binding protein-like [Gallus
gallus]
Length = 632
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 285/631 (45%), Positives = 379/631 (60%), Gaps = 59/631 (9%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
GY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 7 GYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQPADAE 66
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A + +NF I G+P+RIM+S RDP +RKSG GNVFIKNLD SIDNKAL DTF+AFG +L
Sbjct: 67 RALDTMNFEVIKGRPVRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGNIL 126
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--N 201
SCKV D NG S+G+GFV FE +EAA AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 127 SCKVVCDENG-SRGHGFVHFETQEAATRAIQTMNGMLLNDRKVFVGHFKSRKEREAEFGA 185
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
+ +FTNVY+ N + + D L++IF FG S VM D G+S+ FGFVNF+ + A
Sbjct: 186 RAMEFTNVYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMDHTGRSKGFGFVNFEKHEEAQ 245
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLD 318
AV +NG N ++ YVGRAQKR ER+++L+ KFE QER+SRY+ G NLY+KNLD
Sbjct: 246 KAVADMNGKEINGRMVYVGRAQKRLERQSELKRKFEQMKQERVSRYQ---GVNLYVKNLD 302
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
D I+DE+L++ FS +GTITS KVM + G SKG GF FS PEEAT+A+ EMNG+++ K
Sbjct: 303 DGIDDERLRKEFSPYGTITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTK 361
Query: 379 PLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPG 438
PLYVA+AQRKEERKA L Q+ Q A +PG P LG Q G P
Sbjct: 362 PLYVALAQRKEERKAILTNQYMQRLA------TMRALPG-----PFLGSFQPPPGYFLPP 410
Query: 439 LMPPQAAGYGFQQQVFPGLRPGG-----PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQ 493
+ PQ + +RP P PY + R N M+Q
Sbjct: 411 IPQPQTRAAFYSPSPVVPVRPATRWSAQPTRPPPYPAATPILRAAVQPRRLLSNISTMRQ 470
Query: 494 ---------PQFMRNSNQGIRYLDNAR-------NGTDQSVVSM----------VPVPFE 527
PQ R +N G + + +AR G Q S+ VP +
Sbjct: 471 ASTQVPRVPPQAQRVANIGTQTI-SARVPSSPTLRGAPQYKYSLAVRNIQPMGSVPPGAQ 529
Query: 528 VSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
G PA ++ P+ S LA+A P ++ +M+GE+LYPL+ + A K+TGM
Sbjct: 530 QVGEPAVHIQGQEPL------TASMLAAAPPQEQKQMIGERLYPLIHAMHASLAGKITGM 583
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
LLE+D +E+L L+ESPE+L +K+ EA+AVLQ
Sbjct: 584 LLEIDNSELLLLLESPESLHSKIEEAVAVLQ 614
>gi|70990636|ref|XP_750167.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|74669855|sp|Q4WK03.1|PABP_ASPFU RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|66847799|gb|EAL88129.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|159130644|gb|EDP55757.1| polyadenylate-binding protein [Aspergillus fumigatus A1163]
Length = 753
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 302/712 (42%), Positives = 396/712 (55%), Gaps = 103/712 (14%)
Query: 2 EATGAAAATA----AVTSATTAAVPSGY--GNVSLYVGDLEQNVNESQLYDLFSQVAQVV 55
EAT AAA +A AV SA+ + PS + SLYVG+L+ +V E+ LY+LFS + QV
Sbjct: 20 EATNAAATSAPEVTAVESASPSTTPSASQPHSASLYVGELDPSVTEAMLYELFSSIGQVA 79
Query: 56 SVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGY 115
S+RVCRD R SLGYAYVNY+N D A E LN+ I GKP RIM+S RDP++RK+G
Sbjct: 80 SIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQ 139
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKM 175
GNVFIKNLD +IDNKAL DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK
Sbjct: 140 GNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKH 199
Query: 176 LNGMLINDKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTI 233
+NGML+NDK+V+VG + +++R + + FTNVY+ N+ + VTDE+ +K+F FG I
Sbjct: 200 VNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEI 259
Query: 234 TSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLR 293
TSA + +D +GKSR FGFVNF + D+A AAV+++N + YVGRAQK+ ERE +LR
Sbjct: 260 TSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELR 319
Query: 294 AKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-------- 345
++E R+ + K +G NLY+KNL D ++DEKL+ELFS FGTITS KVM D
Sbjct: 320 KQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFSPFGTITSAKVMRDTVTTGETSE 379
Query: 346 ---------------------------------------HGFSKGSGFAAFSMPEEATRA 366
G SKG GF FS P+EA++A
Sbjct: 380 SEKEKEKESNKENEKEGEEKTEEKPKESEEEPKKTEKKILGKSKGFGFVCFSSPDEASKA 439
Query: 367 LNEMNGKMIGRKPLYVAVAQRKEERKARLQAQF-AQIRAPGGMSPLASGIPGYHHGAPRL 425
+ EMN +M+ KPLYVA+AQRK+ R+++L+A A+ + A+G+P P +
Sbjct: 440 VTEMNQRMVNGKPLYVALAQRKDVRRSQLEASIQARNTIRQQQAAAAAGMP-----QPYM 494
Query: 426 GPQQLYYGQGTPGLMPP-QAAGYGFQQQV-----FPGLRPG---------------GPNY 464
P ++YG G G +P Q G F Q PG RPG GPN
Sbjct: 495 QP-AVFYGPGQQGFIPAGQRGGMPFAPQPGMVMGIPGGRPGQYPGPFPGQQGGRGMGPNQ 553
Query: 465 IMPYHLQ-----RQVHPGQRTGVRRSGNTHQMQQPQFMRNS-----------NQGIRYLD 508
+P + Q PG G+ QM Q QF R + QGIR
Sbjct: 554 QIPPNFQGIPMGAMQGPG---GIPNGMGYPQMAQVQFGRGAGGRGQVPGMPMGQGIRGPG 610
Query: 509 NARNGTDQSVVSMVPVPFEVSGMPATPVETPR-PVPVPISTLTSALASASPDDRTRMLGE 567
+ V A P R VP L++ P + +MLGE
Sbjct: 611 YGQGRGGAPVQGGPRPQGGRGQPAAAPPAAGREEVPATGGLTAQTLSAVPPPQQKQMLGE 670
Query: 568 QLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
LYP ++ +P A K+TGMLLEMD E+L L+E EAL+ KV EA++V E
Sbjct: 671 ALYPKIQAQQPELAGKITGMLLEMDNNELLGLLEDEEALRAKVDEALSVYDE 722
>gi|82802757|gb|ABB92429.1| PABP3 [Hylobates lar]
Length = 635
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 280/643 (43%), Positives = 386/643 (60%), Gaps = 56/643 (8%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS+ ++S+RVCRD R S YAYVN+ +P+DA +
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSNYAYVNFQHPKDAEH 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+F+KNLD SI+NKAL DT +AFG VLS
Sbjct: 68 ALDTMNFDVIKGKPLRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNVLS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV F EAA+ AI+ +NG+ +ND +V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFGTREAAERAIEKMNGIPLNDCKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +F NVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTDQSGKSKGFGFVSFEKHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ---ERISRYEKLKGANLYLKNLDD 319
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ +RI+RY+ + NLY+KNLDD
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVV---NLYVKNLDD 303
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
+I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ +P
Sbjct: 304 AIDDERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATEP 362
Query: 380 LYVAVAQRKEE-----------RKARLQAQFAQIRAPGGMSP----LASGIPGYHHGAPR 424
LYVA+AQRKEE RKA + A + P +P + +P + A
Sbjct: 363 LYVALAQRKEERQAYLTNEYMQRKASVPAVPNPVINPYQPAPPSGYFMAAVPQTQNRAAY 422
Query: 425 LGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVHPGQRTGVR 483
P Q + +P A + FQ + PG + P P +P++ R
Sbjct: 423 HPPSQTAQLRPSPCWTAQGARPHPFQNK--PGAIHPAAPR--VPFNTMRPA--------- 469
Query: 484 RSGNTHQMQQPQFMRNSNQ---GIRYLDNARNGTDQSVVSMVPVPFEVSGM--------- 531
S ++ PQ + N++ G R A T V VP G+
Sbjct: 470 -SSRVPRVMSPQRVANTSTKTVGPRPAAAAAAAT--PAVHTVPRYKYAVGVRNPQQHLNA 526
Query: 532 -PATPVETPRPVPVPISTLTSA-LASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P ++ P TLT+A LASA P ++ +MLGE+L+PL++ + P A K+TGMLL
Sbjct: 527 QPQVKMQQPAVHVQGQETLTAAMLASAPPKEQKQMLGERLFPLIQAMHPTLAGKITGMLL 586
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGS 632
E D +E+LH++ESPE+L +KV EA+ VLQ A+ + + S
Sbjct: 587 ETDNSELLHMLESPESLCSKVDEAVVVLQAHQAKEATQKAVNS 629
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 168/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S Y +V F++
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSNYAYVNFQH 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
+ A++A+ +N +I K + + R + V N++V NL +++ ++ L
Sbjct: 62 PKDAEHALDTMNFDVIKGKPLRIMWSQRDPSLRKSGVG----NIFVKNLDKSINNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
FG + S V+ D +G S+ +GFV+F + +AA A+EK+NG ND +VGR + R
Sbjct: 118 TVSAFGNVLSCKVVCDENG-SKGYGFVHFGTREAAERAIEKMNGIPLNDCKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM DQ
Sbjct: 177 KEREAELGARAKE----------FPNVYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTDQ 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|119496945|ref|XP_001265244.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
gi|158512647|sp|A1D4K4.1|PABP_NEOFI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119413406|gb|EAW23347.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
Length = 751
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 302/710 (42%), Positives = 396/710 (55%), Gaps = 101/710 (14%)
Query: 2 EATGAAAATA----AVTSATTAAVPSGY--GNVSLYVGDLEQNVNESQLYDLFSQVAQVV 55
EAT AA +A AV SA+ +A PS + SLYVG+L+ +V E+ LY+LFS + QV
Sbjct: 20 EATNPAATSAPEVTAVESASPSATPSANQPHSASLYVGELDPSVTEAMLYELFSSIGQVA 79
Query: 56 SVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGY 115
S+RVCRD R SLGYAYVNY+N D A E LN+ I GKP RIM+S RDP++RK+G
Sbjct: 80 SIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQ 139
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKM 175
GNVFIKNLD +IDNKAL DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK
Sbjct: 140 GNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKH 199
Query: 176 LNGMLINDKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTI 233
+NGML+NDK+V+VG + +++R + + FTNVY+ N+ + VTDE+ +K+F FG I
Sbjct: 200 VNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEI 259
Query: 234 TSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLR 293
TSA + +D +GKSR FGFVNF + D+A AAV+++N + YVGRAQK+ ERE +LR
Sbjct: 260 TSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELR 319
Query: 294 AKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-------- 345
++E R+ + K +G NLY+KNL D ++DEKL+ELFS FGTITS KVM D
Sbjct: 320 KQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFSPFGTITSAKVMRDTVTAGETSE 379
Query: 346 -------------------------------------HGFSKGSGFAAFSMPEEATRALN 368
G SKG GF FS P+EA++A+
Sbjct: 380 SEKEKESNKENEKEGEEKTEEKPKESEEEAKKTEKKILGKSKGFGFVCFSSPDEASKAVT 439
Query: 369 EMNGKMIGRKPLYVAVAQRKEERKARLQAQF-AQIRAPGGMSPLASGIPGYHHGAPRLGP 427
EMN +M+ KPLYVA+AQRK+ R+++L+A A+ + A+G+P P + P
Sbjct: 440 EMNQRMVNGKPLYVALAQRKDVRRSQLEASIQARNTIRQQQAAAAAGMP-----QPYMQP 494
Query: 428 QQLYYGQGTPGLMPP-QAAGYGFQQQV-----FPGLRPG---------------GPNYIM 466
++YG G G +P Q G F Q PG RPG GPN +
Sbjct: 495 -AVFYGPGQQGFIPAGQRGGMPFAPQPGMVMGIPGGRPGQYPGPFPGQQGGRGMGPNQQI 553
Query: 467 PYHLQ-----RQVHPGQRTGVRRSGNTHQMQQPQFMRNS-----------NQGIRYLDNA 510
P + Q PG G+ QM Q QF R + QG+R
Sbjct: 554 PPNFQGIPMGAMQGPG---GIPNGMGYPQMAQVQFGRGAGGRGQVPGMPMGQGMRGPGYG 610
Query: 511 RNGTDQSVVSMVPVPFEVSGMPATPVETPR-PVPVPISTLTSALASASPDDRTRMLGEQL 569
+ V A P R VP L + P + +MLGE L
Sbjct: 611 QGRGGAPVQGGPRPQGGRGQPAAAPPAAGREEVPATGGLTAQTLNAVPPPQQKQMLGEAL 670
Query: 570 YPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
YP ++ +P A K+TGMLLEMD TE+L L+E EAL+ KV EA++V E
Sbjct: 671 YPKIQAQQPELAGKITGMLLEMDNTELLGLLEDEEALRAKVDEALSVYDE 720
>gi|384493509|gb|EIE84000.1| hypothetical protein RO3G_08705 [Rhizopus delemar RA 99-880]
Length = 624
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/455 (52%), Positives = 313/455 (68%), Gaps = 16/455 (3%)
Query: 21 VPSGYG--NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSN 78
+P+G + SLYVG+L+ +V E+ L+++F+ + V S+RVCRD R SLGYAYVN+ N
Sbjct: 35 LPAGTAPPSASLYVGELDPSVTEAMLFEMFNMIGPVASIRVCRDAVTRRSLGYAYVNFHN 94
Query: 79 PQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAA 138
D A E+LN+ I GKP RIM+S RDPS+RK+G GNVFIKNLD SIDNKAL DTF+A
Sbjct: 95 IVDGERALESLNYTLIKGKPCRIMWSQRDPSLRKTGSGNVFIKNLDPSIDNKALHDTFSA 154
Query: 139 FGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA 198
FG +LSCK+A+D +G SKGYGFV +E EEAA NAIK +NGML+NDK+VYVG V ++ER
Sbjct: 155 FGNILSCKIALDESGNSKGYGFVHYETEEAADNAIKHVNGMLLNDKKVYVGRHVPKKERQ 214
Query: 199 Q--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQS 256
+ KFTNVYV NL E+V DE+ ++ FG ITSA+V D +GKS+ FGFVNF++
Sbjct: 215 AKIEQFRAKFTNVYVKNLDESVKDEEFNEMLAKFGPITSALVQTDDEGKSKGFGFVNFEN 274
Query: 257 PDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
+ A AV+ LN T + K+ YV RAQK+ ERE +LR ++EQ ++ + K +G NLY+KN
Sbjct: 275 HEDAQKAVDALNETEHKGKILYVARAQKKTEREEELRKQYEQAKLEKLAKYQGVNLYIKN 334
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
LDD I+DEKL++ FS +G ITS KVM D+ SKG GF FS P+EAT+A+ EMNG+MIG
Sbjct: 335 LDDDIDDEKLRQEFSVYGVITSAKVMCDEKDTSKGFGFVCFSSPDEATKAVTEMNGRMIG 394
Query: 377 RKPLYVAVAQRKEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGAPRL-GPQQLYY 432
KP+YVA+AQRKE R+++L+AQ A Q+R GM P+ G PGY GAP P +
Sbjct: 395 SKPIYVALAQRKEIRRSQLEAQMAQRNQMRMQQGM-PM-PGAPGYMPGAPMFYAPPGQFM 452
Query: 433 GQG------TPGLMPPQAAGYGFQQQVFPGLRPGG 461
QG P M P+ Q Q PG P G
Sbjct: 453 PQGQRPAVFAPNGMMPRPRWAPQQGQPMPGFPPQG 487
>gi|780291|gb|AAA65224.1| polyadenylate-binding protein [Caenorhabditis elegans]
Length = 646
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 283/638 (44%), Positives = 379/638 (59%), Gaps = 61/638 (9%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y SLYVGDL +VNES L++ FS V+S+RVCRD + R SLGYAYVN+ P DA
Sbjct: 27 SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADA 86
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF ++GKP+RIM+S RDP++R+SG GN+FIKNLD IDNK++ DTF+ FG +
Sbjct: 87 ERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNI 146
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQN- 201
LSCKVAID +G SKGYGFV FE EEAAQNAI+ +NGML+ K+V+VG F Q RAQ+N
Sbjct: 147 LSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKF---QPRAQRNR 203
Query: 202 ----VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ +FTNVYV N + E L+K+F FG ITS VM +GKS+ FGFV F +P
Sbjct: 204 ELGETAKQFTNVYVKNFGDHYNKETLEKVFAKFGNITSCEVM-TVEGKSKGFGFVAFANP 262
Query: 258 DAAAAAVEKLNGTT--NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLK 315
+ A AV+ L+ +T D +V RAQK++ER A+L+ K EQ + R +K +G NLY+K
Sbjct: 263 EEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVK 322
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI 375
NLD++++D+ LK+ F +G ITS KVM D++G SKG GF F PEEAT A+ EMN KM+
Sbjct: 323 NLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMV 382
Query: 376 GRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQG 435
KPLYVA+ QRKE+R+A+L +Q+ Q A M G Y+ P G YY
Sbjct: 383 CSKPLYVAIGQRKEDRRAQLASQYMQRVASMRMHGNVPGAAMYNPTQPGPG----YY--- 435
Query: 436 TPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQ 495
M Q G QQ V PG R G N Y +Q Q Q GV + ++M +PQ
Sbjct: 436 VANPMQQQRNFAGGQQMVRPGGRWGMQNQ---YPVQNQYMMAQGPGVYQ----NRMGRPQ 488
Query: 496 FMRNSNQGIRYLDNARNGTDQSVVSMVPVP-----------------------FEVSGMP 532
N G R N Q V M P +G
Sbjct: 489 ---NQQGGPRGPPQQYNQVAQGGVRMQGPPRTQNPGVQQQNVPRPPQQQQQQRPAPTGPK 545
Query: 533 ATP----VETPRPVPVPI---STLTSA-LASASPDDRTRMLGEQLYPLVENIEPVH--AS 582
A P RP + I LTSA LA+A+P ++ ++LGE++Y L+E + P H A
Sbjct: 546 APPQPYQAYQQRPQGIVIGGQEPLTSAMLAAAAPQEQKQLLGERIYALIEKLYPGHKDAG 605
Query: 583 KVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEA 620
K+TGM+LE+D +E++ +++ E ++KV EA +VL A
Sbjct: 606 KITGMMLEIDNSELIMMLQDSELFRSKVDEAASVLVSA 643
>gi|213403408|ref|XP_002172476.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
gi|212000523|gb|EEB06183.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
Length = 662
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 276/620 (44%), Positives = 359/620 (57%), Gaps = 92/620 (14%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
N SLYVG+L+ +V E+ L+++FS V V S+RVCRD R SLGYAYVNY N D A
Sbjct: 78 NTSLYVGELDPSVTEAMLFEIFSTVGPVASIRVCRDAVTRQSLGYAYVNYHNADDGEKAL 137
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I G+ RIM+S RDPS+RK+G GN+FIKNLD +IDNKAL DTF+AFGT+LSCK
Sbjct: 138 EELNYSLIKGRACRIMWSQRDPSLRKTGTGNIFIKNLDPAIDNKALHDTFSAFGTILSCK 197
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA+D G SKGYGFV F + ++A AI+ +NGML+NDK+VYVG V R++R + +
Sbjct: 198 VALDEYGNSKGYGFVHFASIDSANAAIEHVNGMLLNDKKVYVGHHVSRRDRQSKFEAMKA 257
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTNVY+ N+ VTDE+ +F FG ITS ++KD GK R FGFVNF+S +AA AV
Sbjct: 258 NFTNVYIKNIDPEVTDEEFSGLFEKFGAITSFSLVKDESGKPRGFGFVNFESHEAAQKAV 317
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
+++N + K YVGRAQKR EREA+LR ++EQ ++ + K +G NL++KNL D ++D
Sbjct: 318 DEMNDYEFHGKKLYVGRAQKRHEREAELRKRYEQMKLEKMSKYQGVNLFIKNLSDEVDDN 377
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
LK FS FGTITS KVM D++G SKG GF +S PEEAT+A+ EMN +M+ KPLYVA+
Sbjct: 378 LLKTEFSAFGTITSAKVMTDENGKSKGFGFVCYSSPEEATKAIAEMNQRMLAGKPLYVAL 437
Query: 385 AQRKEERKARLQAQFA---QIR-----APGGMSPLASGIPGYHHGAPRLGPQQLYYGQGT 436
AQRK+ R+++L+AQ Q R A GMS GIPG +YYG
Sbjct: 438 AQRKDVRRSQLEAQIQARNQFRMQQQVAAAGMS-AQFGIPG-----------AMYYG--- 482
Query: 437 PGLMPPQAAGYGFQQQVF-----------------PGLRPGGPNYIMPYHLQRQVHPGQR 479
PG P A G PG+ P + P + PG
Sbjct: 483 PGGYPLPAGARGVPMPHPNMMPPNGKWPVDGAAPQPGMVP-----VYPPGVAAPNFPGYP 537
Query: 480 TGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETP 539
V S +QP SN VPVP M A ETP
Sbjct: 538 RPVVPS------EQPAGQEASN------------------GAVPVP--AFDMNAFSAETP 571
Query: 540 RPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHL 599
+++ ++LGE YPL+ E A K+TGMLLEMD E+L L
Sbjct: 572 -------------------ENQKQILGEYFYPLIAQREAELAGKITGMLLEMDNAELLGL 612
Query: 600 IESPEALKTKVAEAMAVLQE 619
++ EAL KV EA++VL+E
Sbjct: 613 VQDIEALNGKVDEALSVLKE 632
>gi|157818977|ref|NP_001099678.1| poly(A) binding protein, cytoplasmic 6 [Rattus norvegicus]
gi|149027506|gb|EDL83096.1| similar to RIKEN cDNA 4932702K14 (predicted) [Rattus norvegicus]
gi|197246058|gb|AAI68959.1| Poly(A) binding protein, cytoplasmic 3 [Rattus norvegicus]
Length = 643
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 280/646 (43%), Positives = 374/646 (57%), Gaps = 51/646 (7%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RV RD++ R SLGYA VN+ +DA
Sbjct: 8 YSLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRTTRRSLGYASVNFQQLEDAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+F+KNLD SID+K L DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDRSIDSKTLYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +E A+ AI+ +NGM +ND++V+VG F R++R +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEEAERAIEKMNGMFLNDRKVFVGRFKSRRDRQAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ NL E + DE L+ +F FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNLGEDMDDERLQDLFSRFGPALSVKVMTDESGKSKGFGFVSFERHEDARK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKF----------EQERISRYEKLKGANL 312
AV+++NG N K YVGRAQK+ ER+ +L+ KF EQ R + +G NL
Sbjct: 247 AVDEMNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKPKIEQVPQDRSVRCQGVNL 306
Query: 313 YLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNG 372
Y+KNLDD I+DE+L++ FS FGTITS KV ++ G SKG GF FS PEEAT+A+ EMNG
Sbjct: 307 YVKNLDDGIDDERLRKEFSPFGTITSAKVTME-GGRSKGFGFVCFSSPEEATKAVTEMNG 365
Query: 373 KMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPG------GMSPL--ASGIPGYHHGAPR 424
+++ KPLYVA+AQRKEER+A L Q+ Q A G++P A G+ GY A
Sbjct: 366 RIVATKPLYVALAQRKEERQAHLSNQYMQRMASTSAVPNPGINPFQPAQGLSGYFMTA-- 423
Query: 425 LGPQQ---LYYGQGTPGLMPPQAAG--YGFQQQVFPGLRPG-GPNYIMPYHLQRQVHPGQ 478
P Q YY P A G G + F + P+ MP Q
Sbjct: 424 TAPTQNRGTYYAPNQTTQQGPSARGSAQGTRAHPFQNMSSAIHPSNTMPSFSTSGPTSSQ 483
Query: 479 RTGVRRSGNTHQM----------QQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEV 528
R + + QM R Q +Y RN Q + + V +
Sbjct: 484 AVRHRTASTSTQMMGPHPAAASTAAAPAARTVTQ-YKYTAGVRN-PPQHLNTQPQVTTQR 541
Query: 529 SGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGML 588
S + A E S S LASA P + +MLGE L+ L++ + P A K+TGML
Sbjct: 542 SAVSAQGKE---------SLTVSMLASAPPQAQKQMLGEWLFSLIQAMHPALAGKITGML 592
Query: 589 LEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
LE+D E+ H++ESPE L TKV EA+AVLQ A+ + + S+A
Sbjct: 593 LEIDNLELRHMLESPECLHTKVDEAIAVLQAHQAKETSQKAVSSVA 638
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 168/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D + +S GY V F+
Sbjct: 2 NPSDPSYSLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRTTRRSLGYASVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
E A+ A+ +N +I K V + R + V N++V NL ++ + L
Sbjct: 62 LEDAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFVKNLDRSIDSKTLYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ + A A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEEAERAIEKMNGMFLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
+R+A+L A+ ++ N+Y+KNL + ++DE+L++LFS FG S KVM D+
Sbjct: 177 RDRQAELGARAKE----------FTNVYIKNLGEDMDDERLQDLFSRFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDARKAVDEMNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMK 284
>gi|258565691|ref|XP_002583590.1| polyadenylate-binding protein [Uncinocarpus reesii 1704]
gi|237907291|gb|EEP81692.1| polyadenylate-binding protein [Uncinocarpus reesii 1704]
Length = 765
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 294/711 (41%), Positives = 388/711 (54%), Gaps = 121/711 (17%)
Query: 12 AVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGY 71
A +S T A P + SLYVG+L+ +V E+ L++LFS + QV S+RVCRD R SLGY
Sbjct: 41 APSSTTATAQPH---SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGY 97
Query: 72 AYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
AYVNY+N D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLDT+IDNKA
Sbjct: 98 AYVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKA 157
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L DTFAAFG +LSCKVA D G SKGYGFV +E EAAQNAIK +NGML+NDK+V+VG
Sbjct: 158 LHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHH 217
Query: 192 VRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRC 248
+ +++R + + FTNVYV N+ + TDE+ +++F FG ITSA + +DS+ GKSR
Sbjct: 218 IAKKDRQSKFEEMKANFTNVYVKNIDQDTTDEEFRELFEKFGEITSATLARDSESGKSRG 277
Query: 249 FGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLK 308
FGFVNF S ++AAAAV+ LN + YVGRAQK+ ERE +LR ++E RI + K +
Sbjct: 278 FGFVNFTSHESAAAAVDNLNEKDFKSQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQ 337
Query: 309 GANLYLKNLDDSINDEKLKELFSEFGTITSCKVM-------------------------- 342
G NLY+KNL D I+DEKL++LFS +GTITS KVM
Sbjct: 338 GVNLYIKNLSDDIDDEKLRDLFSGYGTITSAKVMRDNLAAESSSDSEKEAKSEGKENEPP 397
Query: 343 -------------------------VDQHGFSKGSGFA--AFSMPEEATRALNEMNGKMI 375
D+ K GF FS P+EA++A+ EMN +M+
Sbjct: 398 EESKDEAAEKAETKDTKEAKTESKKADKKLLGKSKGFGFVCFSSPDEASKAVTEMNQRMV 457
Query: 376 GRKPLYVAVAQRKEERKARLQAQF-AQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ 434
KPLYVA+AQRK+ R+++L+A A+ + A+G+P P + P ++YG
Sbjct: 458 NGKPLYVALAQRKDVRRSQLEASIQARNTIRQQQAAAAAGMP-----QPFMQP-PVFYGP 511
Query: 435 GTPGLMPPQAAGYGFQQ--QVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ 492
G +P Q G FQQ V P + PGG H Q PGQ+ G R N +Q
Sbjct: 512 GQQNFLPNQRGGMPFQQPGMVIPQM-PGG------RHGQFSGFPGQQGG--RGMNPNQQI 562
Query: 493 QPQFMRNSNQG--IRYLDNARNGTDQSVVSMVPVPF--------EVSGMP---------- 532
P QG I NG + ++ V PF V GMP
Sbjct: 563 PPNAYGLGAQGLPISMQGGMPNGLNYPQMAQVQAPFGRGRGQVPAVQGMPPNVQGMGPNA 622
Query: 533 ----ATPVE--TPRP------------------VPVPISTLTSALASASPDDRTRMLGEQ 568
P++ RP P L +A P + +MLGE
Sbjct: 623 QFGRGMPMQQGMGRPGQAGRGQGPAQAAGQRDETSSPSGLTLQMLNAAPPAQQKQMLGEA 682
Query: 569 LYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
+YP + +P A K+TGMLLEMD E+L L++ ALK KV EA+ V E
Sbjct: 683 IYPKIHAHQPELAGKITGMLLEMDNAELLALVDDDTALKAKVDEALTVYDE 733
>gi|255556766|ref|XP_002519416.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223541279|gb|EEF42830.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 632
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 288/620 (46%), Positives = 388/620 (62%), Gaps = 35/620 (5%)
Query: 20 AVPS---GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNY 76
AVPS SLYVG+L +V++ QL D FS+ + SVRVCRD S SL Y YVN+
Sbjct: 2 AVPSTISATATASLYVGELHCDVSDGQLVDAFSEFNTLASVRVCRDSSTGRSLCYGYVNF 61
Query: 77 SNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTF 136
+P+DA A E N P+NGK +R+M+SHRDP R++G GNV++KNL SIDN L + F
Sbjct: 62 ISPEDAIRAIETKNHTPLNGKLMRVMWSHRDPDARRNGIGNVYVKNLSESIDNVGLQELF 121
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FGTVLSCKVA +G+SKG+GFVQFE+E++A +AI+ LNG ++ DKQ+YVG FV++ +
Sbjct: 122 GEFGTVLSCKVATFEDGKSKGHGFVQFESEDSANSAIEKLNGSIVGDKQIYVGKFVKKSD 181
Query: 197 RAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQS 256
R + K+TN+YV NL +T+E L++ F FG I S + +D G SR FGFVNF++
Sbjct: 182 RVLPSPDAKYTNLYVKNLDPGITEELLQEKFSEFGKIVSVAIARDECGSSRGFGFVNFEN 241
Query: 257 PDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
PD A A+E++NGT KV YVGRAQKRAERE LR +FE++R + K KG+N+Y+KN
Sbjct: 242 PDDARWAMERMNGTELGSKVLYVGRAQKRAEREQILRRQFEEKRKEQITKFKGSNVYVKN 301
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
+DD + DE+L+E FS+ GTITS K+M D G SKG GF FS EEA++A+N +G M
Sbjct: 302 IDDDVTDEELREHFSQCGTITSAKLMKDDKGRSKGFGFVCFSSSEEASKAVNTFHGYMFH 361
Query: 377 RKPLYVAVAQRKEERKARLQAQFAQIRA----------PGGMSPLASGIPGYHHGAPRLG 426
RKPLYVA+AQRKEER+A+LQ Q+AQ A PGG +PL P H PR
Sbjct: 362 RKPLYVAIAQRKEERQAQLQLQYAQRIAGFHGPSTPVIPGGYTPLYYTAPSQVH--PR-- 417
Query: 427 PQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGG-PNYIMPYHLQRQVHPGQRTGVRRS 485
P +Y P M P G GF P +P P +MP QRQ G+ VR +
Sbjct: 418 PGMMY----QPLAMRPGWRGNGFAPPSRPVFQPSHLP--VMPIS-QRQHKQGR---VRMN 467
Query: 486 GNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVP-------FEVSGMPATPVET 538
G+ Q + Q + L + ++ ++Q VP + SG+ + +
Sbjct: 468 GHVLPQGGTQSVSYVQQPAQPLTSLKDPSNQRAGQAKYVPNGRTCDVSKGSGVLSAAPNS 527
Query: 539 PRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLH 598
PV L+S LA+ASPD++ ++LGEQLYPLV +P +K+TGMLLEMD +E+L
Sbjct: 528 TGPVSQGSEVLSSMLAAASPDEQKQILGEQLYPLVRKHKPDLVAKITGMLLEMDNSELLL 587
Query: 599 LIESPEALKTKVAEAMAVLQ 618
L+ESPE+L KV EA+ VL+
Sbjct: 588 LLESPESLAAKVEEAVQVLK 607
>gi|157817831|ref|NP_001099621.1| poly(A) binding protein, cytoplasmic 2 [Rattus norvegicus]
gi|149017412|gb|EDL76463.1| poly A binding protein, cytoplasmic 2 (predicted) [Rattus
norvegicus]
Length = 630
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 269/640 (42%), Positives = 376/640 (58%), Gaps = 60/640 (9%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V E+ LY+ FS ++S+RV RD R SLGYA VN+ P DA A +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDT 71
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I GKP+RIM+S RDPS+R+SG GNVFIKNL+ +IDNKAL DTF+AFG +LSCKV
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVV 131
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D NG SKG+GFV FE EEAA+ AI+ +NGML+ND++V+VG F R+ER + + +F
Sbjct: 132 CDENG-SKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVGQFKSRKEREAELGTRTKEF 190
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVY+ N + + D+ L +FG FG + S VM D GKS+ FGFV+F+ + A AV++
Sbjct: 191 TNVYIKNFGDRMDDKTLNGLFGRFGQVLSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDE 250
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
+NG N K YVG AQK+ +R +L+ KFEQ R + +G NLY+KNLDD I+DE+L
Sbjct: 251 MNGKELNGKHIYVGPAQKKVDRHIELKRKFEQVTQDRGIRYQGINLYVKNLDDGIDDERL 310
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
++ FS FGTITS KVM + G SKG GF FS PEEAT+A++EMNG+++ KPLYVA+AQ
Sbjct: 311 QKEFSPFGTITSTKVMTE-GGRSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALAQ 369
Query: 387 RKEERKARLQAQFAQ----IR------------APGGMSPLASGIPGYHHGAP------- 423
RKEER+A L Q+ Q +R AP G S + +P + AP
Sbjct: 370 RKEERQAHLTNQYIQRMASVRSGPNSLINAYQPAPSGYS--VAAVPQTQNCAPCCPSQIV 427
Query: 424 RLGPQQLYYGQGTPGLMPPQAAGYGF---QQQVFPGLRPGGPNYIMPYHLQRQVH----- 475
+ P + QG P +G + F +RP + QR +
Sbjct: 428 QPSPSTRWTAQGARPHPFPNVSGASHPAAPKSSFTTVRPSSSHVPQVMAAQRITNTSAQT 487
Query: 476 PGQRTGVRRSGNTHQMQQ-PQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPAT 534
GQR + S T ++ PQ+ +Y RN +V P+
Sbjct: 488 TGQRPALASSPATTPVRSIPQY--------KYATGVRNSQQHLNAQLV-------QQPSV 532
Query: 535 PVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQT 594
++ P T++ +P ++ +MLGE+L+PL++ + P A K+TGMLLE+D +
Sbjct: 533 CIQGQEP-------WTASTLGTAPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNS 585
Query: 595 EVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E LH+++SPE+L ++ EA++ LQ A + GS +
Sbjct: 586 EPLHMLDSPESLCSRAQEAVSALQAHQANEAAQKAAGSTS 625
>gi|367030019|ref|XP_003664293.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
gi|347011563|gb|AEO59048.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
Length = 787
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 294/724 (40%), Positives = 395/724 (54%), Gaps = 115/724 (15%)
Query: 2 EATGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCR 61
E+ A TA T +++A P + SLYVG+L+ +V E+ L++LFSQ+ V S+RVCR
Sbjct: 40 ESQTAEPDTAGPTPSSSAPHPQS--SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCR 97
Query: 62 DQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIK 121
D R SLGYAYVNY++ D A E LN+ I G+P RIM+S RDP++RK+G GNVFIK
Sbjct: 98 DAVTRRSLGYAYVNYNSTADGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIK 157
Query: 122 NLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLI 181
NLDT+IDNKAL DTFAAFG +LSCKVA D NG SKGYGFV +E +EAA AIK +NGML+
Sbjct: 158 NLDTAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLL 217
Query: 182 NDKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVM 239
N+K+VYVG + +++R + + +TNVYV N+ VT+E+ +++F +G +TS+ +
Sbjct: 218 NEKKVYVGYHIPKKDRQSKFEEMKANYTNVYVKNINLEVTEEEFRELFSKYGEVTSSTLA 277
Query: 240 KDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQE 299
+D +GKSR FGFVNF + D+AA AVE+LNG + YVGRAQK+ ERE +LR +E
Sbjct: 278 RDQEGKSRGFGFVNFSTHDSAAKAVEELNGKEFRGQELYVGRAQKKHEREEELRKSYEAA 337
Query: 300 RISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVM----------VDQHGFS 349
R + K +G NLY+KNL D I+D+KL+++FSEFG ITS KVM D+ G
Sbjct: 338 RAEKANKYQGVNLYIKNLADDIDDDKLRQMFSEFGPITSAKVMRDNPPDHHHSADKEGKD 397
Query: 350 K-------------------------------------------GSGFAAFSMPEEATRA 366
K G GF FS P++AT+A
Sbjct: 398 KENKKEGEQEAKKEGKEEGEKDGEAKEGEKKTEKKPERKLGKSKGFGFVCFSNPDDATKA 457
Query: 367 LNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLA--SGIPGYHHGAPR 424
+ EMN +M+ KPLYVA+AQRK+ RK++L+A Q R M A +G+P + AP
Sbjct: 458 VAEMNQRMVEGKPLYVALAQRKDVRKSQLEASI-QARNQLRMQQAAAQAGLPQQYMQAP- 515
Query: 425 LGPQQLYYGQG-TPGLMPPQAAGYGFQQQVF--PGLRPGGPNYIMPYHLQ--RQVHPGQR 479
+YY G P MPP G F Q P ++ G P PY Q R P Q+
Sbjct: 516 -----IYYAPGQQPNFMPPGGRGMPFPQAGLGMPAVQGGRPGQFPPYAQQGGRGAIPPQQ 570
Query: 480 T-----GVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSM--VPVP------- 525
G G Q PQF+ Q + N M +PVP
Sbjct: 571 IPLYPLGQFPPGAYGQPTNPQFLAAIQQVQQQAANLGGRGAPGGRGMQGMPVPQGMPGGP 630
Query: 526 ----FEVSGMP------------------ATPVETPRPVPV-------PISTLTSALASA 556
F +G P A P P+ S L S LA+
Sbjct: 631 GMAGFPPNGRPQNGAIGGRGGPNRGGNFAAGRGGVPPAGPLGGAGELNATSLLQSQLAAT 690
Query: 557 S-PDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMA 615
S P + ++LGE L+P ++ ++P A K+TGMLLEMD E+++L+E AL KV EAMA
Sbjct: 691 SNPQQQKQILGENLFPKIQALQPELAGKITGMLLEMDNNELVNLLEDETALVAKVNEAMA 750
Query: 616 VLQE 619
V E
Sbjct: 751 VYDE 754
>gi|313218343|emb|CBY41581.1| unnamed protein product [Oikopleura dioica]
Length = 613
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 272/633 (42%), Positives = 376/633 (59%), Gaps = 57/633 (9%)
Query: 18 TAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYS 77
T PS Y SLYVGDL E+ LYD FSQ V+S+RVCRD R SLGYAYVN+
Sbjct: 2 TTVAPS-YPMASLYVGDLHPEATEAMLYDKFSQAGPVLSIRVCRDMITRRSLGYAYVNFQ 60
Query: 78 NPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFA 137
P+DA A + +NF + GK IRIM+S RDP++RKSG GN+FIKNLD +IDNK L DTF+
Sbjct: 61 RPEDAERAIDTMNFDELKGKAIRIMWSQRDPALRKSGVGNIFIKNLDKTIDNKMLYDTFS 120
Query: 138 AFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
AFG +LSCKV ++ G+SKGYGFV FE EEAA AI+ L+GML+NDK+V+VG F R ER
Sbjct: 121 AFGNILSCKVNVNLAGESKGYGFVHFETEEAAVKAIEKLDGMLMNDKKVFVGRFKSRGER 180
Query: 198 AQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQ 255
++ + + +FTNV++ NL D L ++FG G++ S + D +GKSR FGFV+F+
Sbjct: 181 VREYGDRAKQFTNVFIKNLPAEWDDAKLTEVFGEHGSVMSVALATDENGKSRQFGFVSFE 240
Query: 256 SPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLK 315
+ + A VEKL+ K +VGRAQK+AER+A+L+ KFE+ + R ++ +G NLY+K
Sbjct: 241 THECAEKVVEKLHDKEFEGKKIFVGRAQKKAERQAELKVKFEKLKHERNQRYQGVNLYVK 300
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVD---QHGFSKGSGFAAFSMPEEATRALNEMNG 372
NLDDSI D+ L+E F+ +G ITS KVM D + SKG GF F+ EEAT+A+ EMNG
Sbjct: 301 NLDDSITDDILREHFAPYGNITSSKVMTDTDVEGTRSKGFGFVCFTSAEEATKAVTEMNG 360
Query: 373 KMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYY 432
++I KPLYVA+AQRK+ERKA LQ Q+ Q R GM + + P+ G LY
Sbjct: 361 RIIASKPLYVALAQRKDERKAHLQQQYMQ-RVTTGMR-----LQAFPTNQPQYG--NLY- 411
Query: 433 GQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVH------------PGQRT 480
MPP + F+ + P R Y L+ ++ GQ
Sbjct: 412 -------MPPPIQQHPFRMSIRPTPRWSQVKYDQLVKLRSKIRFLIKPSQYGPMVRGQMP 464
Query: 481 GVRRSGNTHQMQQP--QFMRNS---------NQGIRYLDNARNGTDQSVVSMVPVPFEVS 529
G R+ N + P +F N+ NQ I Y RN + +P E +
Sbjct: 465 GGPRAQNGVRGIAPITRFPANNYTARAGSRPNQSIIYKPGVRNPLPTPAEAQIPA--EQA 522
Query: 530 GMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P P +T +P+ I LA+A P ++ ++LGE+LYP + + P K+TGMLL
Sbjct: 523 AQPKAP-DTEQPLNATI------LAAAPPQEQKQLLGERLYPSIRQLYPELCGKITGMLL 575
Query: 590 EMDQTEVLHLIES---PEALKTKVAEAMAVLQE 619
E++ +E+L ++++ P L+ KV EA+ VL +
Sbjct: 576 EIENSELLAMLDTKSNPGLLQEKVQEAVTVLTQ 608
>gi|164657987|ref|XP_001730119.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
gi|159104014|gb|EDP42905.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
Length = 664
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 275/612 (44%), Positives = 368/612 (60%), Gaps = 42/612 (6%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
G N SLYVG+LE NVNE+ L+++F+ V V S+RVCRD R SLGYAYVN+ N +D+
Sbjct: 76 GSVNTSLYVGELEPNVNEAILFEIFNMVGAVSSIRVCRDTVTRRSLGYAYVNFLNAEDSE 135
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A E LN+ PI G+P RIM+S RDP R++G GN+FIKNLD +IDNKAL DTFAAFG +L
Sbjct: 136 RALEQLNYTPIRGRPCRIMWSQRDPGQRRAGQGNIFIKNLDEAIDNKALHDTFAAFGKIL 195
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QN 201
SCKVA + +G S GYGFV +E+ +AA+ AIK +NGML+NDK+VYVG + +++R +
Sbjct: 196 SCKVASNEHG-SLGYGFVHYESNDAAEAAIKHVNGMLLNDKKVYVGHHISKKDRQAKIEE 254
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
+TNVYV NL VT E+ +K+F +G ITSA + D +GKSR FGFVNF + AA
Sbjct: 255 ARAHYTNVYVKNLDPAVTQEEFEKLFEKYGKITSAAIATDQEGKSRGFGFVNFSEHEQAA 314
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AVE+LN T + + ++GRAQK++ERE +LR +E + + K +G NLY+KNL +
Sbjct: 315 KAVEELNDTEFHGQKLFLGRAQKKSEREEELRRAYEAAKNEKLSKYQGVNLYIKNLPEDF 374
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DE+L+E F+ FGT TS KVM G S+G GF +S PEEA +A+ EMNGKMI +PLY
Sbjct: 375 DDERLQEEFAPFGTTTSAKVMRTPTGASRGFGFVCYSAPEEANKAVAEMNGKMIENRPLY 434
Query: 382 VAVAQRKEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPG 438
VA+AQRK+ R +L AQ Q+R + A+ Y GAP +YY Q
Sbjct: 435 VALAQRKDVRHQQLAAQMMQHNQLRLQQQQAAAAAAAQMY-PGAP-----GMYYPQ---- 484
Query: 439 LMPPQAAGYG-FQQQVFPGLRPGGPNYIMPYHLQRQ--VHPGQ---RTGVRRSGNTHQMQ 492
PP AAG G F QV P PG + P Q PGQ G+ G
Sbjct: 485 --PPAAAGMGQFPGQVRPQYAPGIMQGMPPMAGQPAGPYPPGQFPPAGGMFPQGYRPPRP 542
Query: 493 QPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTS- 551
+ + V PV PA P LT+
Sbjct: 543 PRGAAAPPAGAPAGVPAGAGAPRTAAVPAQPV------QPAQP-----------EVLTAA 585
Query: 552 ALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVA 611
ALA+ASP+++ +MLGE +YP + + +P A K+TGM+LE+ E+LHL+E EAL +KV
Sbjct: 586 ALANASPEEQKQMLGEAIYPKIASTQPQLAGKLTGMILELPVGELLHLVEDDEALASKVD 645
Query: 612 EAMAVLQEAAAR 623
EA+ VL+E +R
Sbjct: 646 EALTVLREYESR 657
>gi|301125993|ref|XP_002909814.1| polyadenylate-binding protein, putative [Phytophthora infestans
T30-4]
gi|262103703|gb|EEY61755.1| polyadenylate-binding protein, putative [Phytophthora infestans
T30-4]
Length = 587
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 283/596 (47%), Positives = 372/596 (62%), Gaps = 54/596 (9%)
Query: 51 VAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSI 110
V V S+RVCRD R SLGYAYVN+ N DA A + +NF I G P RIM+S RDPS+
Sbjct: 14 VGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSL 73
Query: 111 RKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAA 169
RKSG GN+F+KNLDTSIDNKAL DTF+ FG +LSCKVAI+ + G SKGYG+V +E EAA
Sbjct: 74 RKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIEHTTGNSKGYGYVHYETAEAA 133
Query: 170 QNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGH 229
AI +NGMLI +V+VG F +RQ+R + +TN YV N+ TD DL K F
Sbjct: 134 TEAIAKINGMLIAGTEVFVGHFQKRQDRPDAD---DWTNCYVKNIPTQWTDADLLKEFEP 190
Query: 230 FGTITSAIVMKDSDG--KSRCFGFVNFQSPDAAAAAVEKLNGTT-----NNDKVWYVGRA 282
FG + SA+VMKD+ +R FGFVN++ DAA AV+ LNG + D YVG+A
Sbjct: 191 FGKVLSAVVMKDNANPDHNRGFGFVNYEESDAAHKAVDALNGKSYPAGEGLDTEMYVGKA 250
Query: 283 QKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVM 342
QKR+ERE +LR KFEQ ++ R K +G NLY+KNLDD ++D++L+E F+E GTITS +VM
Sbjct: 251 QKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLSDDELREAFAECGTITSSRVM 310
Query: 343 VDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQI 402
D +G S+G GF FS PEEA +A+ EMNGK+I KP+YVA+AQRKE R+A+L+AQ AQ
Sbjct: 311 RDPNGNSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQQ 370
Query: 403 RAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQA-AGYGFQQQVFP------ 455
RA GM + G+P P G ++YGQ PG +PPQA G+ + QQ+ P
Sbjct: 371 RA--GMV-VGRGMP--MGQPPMYGAAPMFYGQ--PGQLPPQARQGFMYPQQMMPRGVQRG 423
Query: 456 ----GLR-PGGP---NYIMPY-----HLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQ 502
G R PG P Y MP+ +G R +G+ + +P +S +
Sbjct: 424 PMPYGARVPGAPAPGGYPMPWLRHAHAAAAWPAASWPSGPRPAGSLRAL-RPTAATSSTR 482
Query: 503 GIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRT 562
AR+ Q V+ PA PV+ P P+ ++ALA+ASP+ +
Sbjct: 483 LTPATTPARDVPPQGVMP-----------PAAPVQNAGPEPL----TSAALAAASPEIQK 527
Query: 563 RMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
M+GE+LYPL+ +P A K+TGMLLEMD E+LHL+ESPEAL+ K+ EAM VL+
Sbjct: 528 NMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEAMTVLE 583
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 157/299 (52%), Gaps = 24/299 (8%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ +V +L+ +++ LYD FS ++S +V + + +S GY YV+Y + A
Sbjct: 76 SGVGNI--FVKNLDTSIDNKALYDTFSLFGNILSCKVAIEHTTGNSKGYGYVHYETAEAA 133
Query: 83 ANAKEALNFMPINGKPIRI-MYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGT 141
A +N M I G + + + R + N ++KN+ T + L F FG
Sbjct: 134 TEAIAKINGMLIAGTEVFVGHFQKRQDRPDADDWTNCYVKNIPTQWTDADLLKEFEPFGK 193
Query: 142 VLSCKVAIDSNG--QSKGYGFVQFENEEAAQNAIKMLNGMLIN-----DKQVYVGLFVRR 194
VLS V D+ ++G+GFV +E +AA A+ LNG D ++YVG +R
Sbjct: 194 VLSAVVMKDNANPDHNRGFGFVNYEESDAAHKAVDALNGKSYPAGEGLDTEMYVGKAQKR 253
Query: 195 QERAQQNVSPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD 241
ER ++ + KF N+YV NL + ++D++L++ F GTITS+ VM+D
Sbjct: 254 SER-ERELRNKFEQLKMERINKYQGVNLYVKNLDDQLSDDELREAFAECGTITSSRVMRD 312
Query: 242 SDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQER 300
+G SR FGFV F +P+ A AV ++NG + K YV AQ++ R A L A+ Q+R
Sbjct: 313 PNGNSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQQR 371
>gi|56758360|gb|AAW27320.1| SJCHGC06322 protein [Schistosoma japonicum]
Length = 721
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 285/684 (41%), Positives = 384/684 (56%), Gaps = 89/684 (13%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
G N SLYVGDL V++S L FS++ V+S RVCRD + R SLGY YVN+ +P+ A
Sbjct: 9 GLMNSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRQSLGYGYVNFEDPKHAE 68
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A E LN+ P+ G+PIRIM+S RDPS+RKSG GN+FIKNLD SI+ K L DTF+ FG +L
Sbjct: 69 QALEVLNYEPLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFFGRIL 128
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS 203
SCK+ +D NGQSKGYGFV FE EE A+ AI+ +N M+I D+ VYVG F+ + ER Q
Sbjct: 129 SCKIVMDENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGKFIPKTERKSQARK 188
Query: 204 PKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAA 263
KF N+YV N +E LK++F FG I SA VMKD++GKS+ FGFV + PD A A
Sbjct: 189 VKFNNLYVKNFPPETDNEKLKEMFSEFGEIKSACVMKDNEGKSKGFGFVCYLDPDHAENA 248
Query: 264 VEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK-LKGANLYLKNLDDSIN 322
V ++G +V Y RAQ++ ER+ +L+ K E++R R + NLY+KNLDD+I+
Sbjct: 249 VRTMHGKEIEGRVLYCARAQRKEERQEELKQKIEKQRAERQSNYMLNVNLYVKNLDDNID 308
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
D++L+E FS G+ITS KVM D + SKG GF F+ PE+A RA+ +MNG +IG KPLYV
Sbjct: 309 DKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYV 368
Query: 383 AVAQRKEERKARL----QAQFAQIRAPGGMSPLASGIPG----YHHGAPRLGPQQLYY-- 432
A+AQRKE+R+A+L Q + AQ RAP ++ + +PG +++ P Q+ Y+
Sbjct: 369 ALAQRKEDRRAKLIEEHQQRLAQYRAP--VASMIPAVPGHAAPHNYFPPAFQAQRFYHPS 426
Query: 433 ------------GQGTP---GLMP--PQAAGY----------------GFQQQVFPGL-R 458
G P G +P P AGY F Q PG+ R
Sbjct: 427 SAVLSSQPRWNRAAGIPAQIGAIPNRPPVAGYYPGAPNPAAITANQMAAFAQLRTPGVNR 486
Query: 459 PGGPNYI--MPY--HLQRQVHPGQRTGVRRSGNTHQ-MQQPQFMRNSNQGIRYLDNA--- 510
P PN + MP HLQ Q +R Q + PQ + + G+ A
Sbjct: 487 PMMPNGMSSMPTTPHLQTAAVFNQAANQQRQATGRQGVVVPQVLGATTGGLNQRPTAASV 546
Query: 511 ------RNGTDQ-SVVSMVPVPFEVSGMPATPVET-------------PRPVPVP---IS 547
N T + V S VP SGMP T +P VP S
Sbjct: 547 VAGPPSANPTMRPQVASQVPRAVMHSGMPNITNATTNVRFHQTARNVSAQPTLVPTGNTS 606
Query: 548 TL-----------TSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEV 596
TL SALA S D+ R LGE L+P ++ + P A K+TGMLL +D EV
Sbjct: 607 TLLSPLGDQGQLTISALAQLSEVDQKRALGEHLFPRIQTMYPTLARKLTGMLLGVDNAEV 666
Query: 597 LHLIESPEALKTKVAEAMAVLQEA 620
++L+ES + L+ K E ++VL+ +
Sbjct: 667 INLLESDDLLRAKCEEGISVLESS 690
>gi|336276750|ref|XP_003353128.1| hypothetical protein SMAC_03445 [Sordaria macrospora k-hell]
gi|380092612|emb|CCC09889.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 754
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 282/672 (41%), Positives = 382/672 (56%), Gaps = 91/672 (13%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD R SLGYAYVNY+ D A
Sbjct: 60 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKAL 119
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I G+P RIM+S RDP++RK+G GN+FIKNLD +IDNKAL DTFAAFG +LSCK
Sbjct: 120 EELNYTLIKGRPCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFGNILSCK 179
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA D +G SKGYGFV +E +EAA AIK +NGML+N+K+VYVG + +++R + +
Sbjct: 180 VAQDEHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 239
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTNVYV N+ VTD++ +++F FG +TS+ + +D +GK+R FGFVNF + +AAA AV
Sbjct: 240 NFTNVYVKNINHEVTDDEFRELFEKFGEVTSSSLARDQEGKTRGFGFVNFTTHEAAAKAV 299
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
+ LNG + YVGRAQK+ ERE +LR +E R+ + K +G NLY+KNL D ++DE
Sbjct: 300 DDLNGKDFRGQDLYVGRAQKKHEREEELRRSYEAARLEKANKYQGVNLYIKNLGDDVDDE 359
Query: 325 KLKELFSEFGTITSCKVMVD---------------------------------------- 344
KL+ +FSE+G ITS KVM D
Sbjct: 360 KLRAMFSEYGPITSAKVMRDSLIEGEEKDEKDKENKKEGETKEEEEKEGSAEKKTEKKGD 419
Query: 345 -QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ G SKG GF FS P++AT+A+ EMN +M+ KPLYVA+AQRK+ RK++L+A Q R
Sbjct: 420 RKLGKSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVALAQRKDVRKSQLEASI-QAR 478
Query: 404 APGGMSPLA--SGIPGYHHGAPRLGPQQLYYGQGTPGLMP-PQAAGYGFQQQVFP--GLR 458
M A +G+P + AP +YY PG MP P G F Q P G R
Sbjct: 479 NQLRMQQAAAQAGMPQQYMQAP------VYYAGQQPGFMPAPGGRGVPFPQGGIPVQGGR 532
Query: 459 P-------GGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNAR 511
P GG + P + +P + G PQ+M Q + L R
Sbjct: 533 PGQYPYQQGGRGGVPPQQMPPMGYPINQFGP----GAFPPNTPQYMAAMGQ-VGALGGGR 587
Query: 512 NGTDQSVVSMVP--VPFEVSGMPAT--PVETPR-------------PVP-VPI-----ST 548
G +P +P + G PA TPR PVP P S
Sbjct: 588 GGPAGRGPQGIPAGIPQGLQGAPANGGGRGTPRGNANFMAAGRGASPVPGAPADLSAGSF 647
Query: 549 LTSALASA-SPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALK 607
L + LA+ P + +++GE L+P ++ I+P A K+TGMLLEMD E+++L E AL
Sbjct: 648 LQAQLATTQDPQAQKQIIGENLFPKIQAIQPALAGKITGMLLEMDNAELINLFEDDNALN 707
Query: 608 TKVAEAMAVLQE 619
KV EA+AV E
Sbjct: 708 VKVQEALAVYDE 719
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 158/336 (47%), Gaps = 66/336 (19%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GN+ ++ +L+ ++ L+D F+ ++S +V +D+ S GY +V+Y + A
Sbjct: 146 TGAGNI--FIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEHGNSK-GYGFVHYETDEAA 202
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIR--------KSGYGNVFIKNLDTSIDNKALCD 134
+ A + +N M +N K ++ H P K+ + NV++KN++ + + +
Sbjct: 203 SQAIKHVNGMLLNEK--KVYVGHHIPKKDRQSKFEEMKANFTNVYVKNINHEVTDDEFRE 260
Query: 135 TFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRR 194
F FG V S +A D G+++G+GFV F EAA A+ LNG + +YVG ++
Sbjct: 261 LFEKFGEVTSSSLARDQEGKTRGFGFVNFTTHEAAAKAVDDLNGKDFRGQDLYVGRAQKK 320
Query: 195 QERAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
ER ++ + K+ N+Y+ NL + V DE L+ +F +G ITSA VM+DS
Sbjct: 321 HEREEELRRSYEAARLEKANKYQGVNLYIKNLGDDVDDEKLRAMFSEYGPITSAKVMRDS 380
Query: 243 -----------------------------------------DGKSRCFGFVNFQSPDAAA 261
GKS+ FGFV F +PD A
Sbjct: 381 LIEGEEKDEKDKENKKEGETKEEEEKEGSAEKKTEKKGDRKLGKSKGFGFVCFSNPDDAT 440
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
AV ++N + K YV AQ++ R++ L A +
Sbjct: 441 KAVTEMNQRMVDGKPLYVALAQRKDVRKSQLEASIQ 476
>gi|121702907|ref|XP_001269718.1| polyadenylate-binding protein [Aspergillus clavatus NRRL 1]
gi|158512635|sp|A1CRM1.1|PABP_ASPCL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119397861|gb|EAW08292.1| polyadenylate-binding protein [Aspergillus clavatus NRRL 1]
Length = 754
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 292/723 (40%), Positives = 394/723 (54%), Gaps = 123/723 (17%)
Query: 2 EATGAAAATAAVTSATTAAVPSGYGN------VSLYVGDLEQNVNESQLYDLFSQVAQVV 55
EAT AAA +A +A ++ P+ N SLYVG+L+ +V E+ LY+LFS + QV
Sbjct: 19 EATNAAATSAPEVTAVESSSPTSPNNNNQPHSASLYVGELDPSVTEAMLYELFSSIGQVA 78
Query: 56 SVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGY 115
S+RVCRD R SLGYAYVNY+N D A E LN+ I GKP RIM+S RDP++RK+G
Sbjct: 79 SIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQ 138
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKM 175
GNVFIKNLD++IDNKAL DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK
Sbjct: 139 GNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKH 198
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTI 233
+NGML+NDK+V+VG + +++R + + FTN+Y+ N+ VT+E+ +KIF FG I
Sbjct: 199 VNGMLLNDKKVFVGHHISKKDRQSKFDEMKANFTNIYIKNIDPDVTEEEFRKIFEQFGEI 258
Query: 234 TSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLR 293
TSA + +D +GKSR FGFVN+ + ++A AAV++++ + YVGRAQK+ ERE +LR
Sbjct: 259 TSATLSRDPEGKSRGFGFVNYSTHESAQAAVDEMHDKEVKTQKLYVGRAQKKHEREEELR 318
Query: 294 AKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVM----------- 342
++E R+ + K +G NLY+KNL D ++DEKL+ELF +GTITS KVM
Sbjct: 319 KQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFGPYGTITSAKVMRDSTPAERTET 378
Query: 343 ----------------------------------------VDQHGFSKGSGFA--AFSMP 360
D+ K GF FS P
Sbjct: 379 PDSEKEKEVNKENEKKEDEEKAAEEKPKESDEEKKDETKKSDKKLLGKSKGFGFVCFSSP 438
Query: 361 EEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQF-AQIRAPGGMSPLASGIPGYH 419
+EA++A+ EMN +M+ KPLYVA+AQRK+ R+++L+A A+ + A+G+P
Sbjct: 439 DEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEASIQARNTIRQQQAAAAAGMP--- 495
Query: 420 HGAPRLGPQQLYYGQGTPGLMPP-QAAGYGFQQQV-----FPGLRPGGPNYIMPYHLQRQ 473
P + P ++YG G G +P Q G F Q PG RPG Y P+
Sbjct: 496 --QPYMQP-AVFYGPGQQGFIPAGQRGGMPFAPQPGMVMGIPGGRPG--QYPGPF----- 545
Query: 474 VHPGQRTGVRRSGNTHQMQQPQFM---RNSNQGIRYLDNAR---NGTDQSVVSMVPVPFE 527
PGQ+ G R G QM P F + QG + N Q +
Sbjct: 546 --PGQQGG-RGMGPNQQM-PPNFQGIPMGAMQGPGGIPNGMGYPQAMGQVQFGRGGGRGQ 601
Query: 528 VSGMP-------------------------------ATPVETPRPVPVPISTLTSALASA 556
V GMP A P P T AL +A
Sbjct: 602 VPGMPMGQGMRGPGYQGRGGPQGGPRPQGGRGQNAAAQPAAGREEAPAGALT-AQALNAA 660
Query: 557 SPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAV 616
+P + +MLGE LYP ++ +P A K+TGMLLEMD TE+L L+E +AL+ KV EA++V
Sbjct: 661 APPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNTELLGLLEDDDALRAKVDEALSV 720
Query: 617 LQE 619
E
Sbjct: 721 YDE 723
>gi|290981403|ref|XP_002673420.1| polyadenylate binding protein [Naegleria gruberi]
gi|284087003|gb|EFC40676.1| polyadenylate binding protein [Naegleria gruberi]
Length = 571
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 264/610 (43%), Positives = 371/610 (60%), Gaps = 62/610 (10%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y + SLYVGDL + ++E+ L+DLF +V ++S+R+CRD R SLGYAYVN+ NPQDA
Sbjct: 3 YSSASLYVGDLHEEISEALLFDLFHEVGPIISIRICRDAMTRKSLGYAYVNFQNPQDAER 62
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + LN+ + G PIRIM+S RDPSIRKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 63 ALDTLNYASVKGIPIRIMWSQRDPSIRKSGIGNIFIKNLDKSIDNKALYDTFSAFGNILS 122
Query: 145 CKVAIDS--------NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
CKV + N +S GYGFV FE +EAA+ AI +NGML+N KQV+VG FV++ E
Sbjct: 123 CKVCQATKKGDNGGDNVESAGYGFVHFETQEAAEKAIAKINGMLLNGKQVFVGPFVKKTE 182
Query: 197 RAQ-QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQ 255
R + + FTN+YV NL +V +++L ++F FG I +A+VM+ +G S+ FGF+NF
Sbjct: 183 RLKILSNEDSFTNIYVKNLDASVDEKELSEVFSKFGEIQNAVVMRGENGASKEFGFINFA 242
Query: 256 SPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLK 315
+A A++++N +K +VGRAQK+ ER A L+ F++ + + K KG NLY+K
Sbjct: 243 DHASALIAIDEMNEKDFKNKKLFVGRAQKKNERRAKLKEYFQKLKQEKVNKYKGLNLYVK 302
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI 375
NLDDS++DE+L++ FS+FG ITS KVM D S+G GF F PE A +AL EM+G MI
Sbjct: 303 NLDDSVDDERLRQEFSKFGDITSAKVMSDNKQ-SRGFGFVCFKTPEAANKALTEMSGHMI 361
Query: 376 GRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQG 435
G KPLYV AQ KE R+++L+AQ+ + P + P++ PQ QG
Sbjct: 362 GSKPLYVNFAQPKELRRSQLEAQYNARKQPQMI--------------PQMMPQFFIPAQG 407
Query: 436 TPGLMPPQAAGYGFQQQVFPGLRP--GGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQ 493
PP + Q+ P +P GG RQ + R G+ R G++ + +
Sbjct: 408 A---FPPPGS------QIKPRWQPVAGG----------RQSNQN-RGGMSRGGSSQRGAR 447
Query: 494 ---PQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLT 550
+N+ + I+Y +NARN P E + + P LT
Sbjct: 448 GGNANTAKNAGR-IKYNNNARNQ-----------PREQPQQTTPNTQEAQTTQAPSDQLT 495
Query: 551 SA-LASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTK 609
+ LA S D+ ++LGE+L+PLV EP +A K+TGMLL+M+ +++L LIES +AL K
Sbjct: 496 AEYLAKLSEQDQKQLLGERLFPLVHLREPKNAPKITGMLLDMEVSDILTLIESTDALNQK 555
Query: 610 VAEAMAVLQE 619
+ EA+ VL E
Sbjct: 556 IKEAVKVLVE 565
>gi|336465951|gb|EGO54116.1| hypothetical protein NEUTE1DRAFT_87204 [Neurospora tetrasperma FGSC
2508]
gi|350287213|gb|EGZ68460.1| polyadenylate binding protein [Neurospora tetrasperma FGSC 2509]
Length = 764
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 281/681 (41%), Positives = 385/681 (56%), Gaps = 97/681 (14%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD R SLGYAYVNY+ D A
Sbjct: 59 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKAL 118
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I G+P RIM+S RDP++RK+G GN+FIKNLD +IDNKAL DTFAAFG +LSCK
Sbjct: 119 EELNYTLIKGRPCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFGNILSCK 178
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA D +G SKGYGFV +E +EAA AIK +NGML+N+K+VYVG + +++R + +
Sbjct: 179 VAQDEHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 238
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTNVYV N+ VTDE+ +++F FG +TS+ + +D +GK+R FGFVNF + +AAA AV
Sbjct: 239 NFTNVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQEGKTRGFGFVNFTTHEAAAQAV 298
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
++LNG + YVGRAQK+ ERE +LR +E R+ + K +G NLY+KNL D ++D+
Sbjct: 299 DELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLGDDVDDD 358
Query: 325 KLKELFSEFGTITSCKVMVD---------------------------------------- 344
KL+ +FSE+G ITS KVM D
Sbjct: 359 KLRAMFSEYGPITSAKVMRDSLIEGSEEKDEKDKENKKEGEAEEEQKEGSEKKTEKKGDR 418
Query: 345 QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRA 404
+ G SKG GF FS P++AT+A+ EMN +M+ KPLYVA+AQRK+ RK++L+A Q R
Sbjct: 419 KLGKSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVALAQRKDVRKSQLEASI-QARN 477
Query: 405 PGGMSPLA--SGIPGYHHGAPRLGPQQLYYGQGTPGLMP-PQAAGYGFQQ-QVFPGLRPG 460
M A +G+P + AP +YY PG MP P G F Q + PG++ G
Sbjct: 478 QLRMQQAAAQAGMPQQYMQAP------VYYAGQQPGFMPAPGGRGVPFPQGGIVPGVQGG 531
Query: 461 GPNYIMPYH------LQRQVHPGQRTGVRRSG-NTHQMQQPQFMRNSNQGIRYLDNARNG 513
P PY + Q P + + G PQ+M Q + L R G
Sbjct: 532 RPGQY-PYQQGGRGGVPPQQMPPMGYPINQFGPGAFPPNTPQYMAAMGQ-VGALGGGRGG 589
Query: 514 TDQSVVSMVP--VPFEVSGMPATPVETP--RP----------------------VPVP-- 545
+P +P + G PA P P RP P+P
Sbjct: 590 PAGRGPQGIPAGIPQGLQGGPAVPGYPPAGRPQNGGGRGTPRGNANFMAAGRGASPIPGA 649
Query: 546 ------ISTLTSALASA-SPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLH 598
S L + LA+ P + +++GE L+P ++ I+P A K+TGMLLEMD E+++
Sbjct: 650 PADLSAGSFLQAQLATTQDPQAQKQIIGENLFPKIQAIQPALAGKITGMLLEMDNAELIN 709
Query: 599 LIESPEALKTKVAEAMAVLQE 619
L E AL KV EA+AV E
Sbjct: 710 LFEDDNALNVKVQEALAVYDE 730
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 160/335 (47%), Gaps = 65/335 (19%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GN+ ++ +L+ ++ L+D F+ ++S +V +D+ S GY +V+Y + A
Sbjct: 145 TGAGNI--FIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEHGNSK-GYGFVHYETDEAA 201
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIR--------KSGYGNVFIKNLDTSIDNKALCD 134
+ A + +N M +N K ++ H P K+ + NV++KN++ + ++ +
Sbjct: 202 SQAIKHVNGMLLNEK--KVYVGHHIPKKDRQSKFEEMKANFTNVYVKNINNEVTDEEFRE 259
Query: 135 TFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRR 194
FA FG V S +A D G+++G+GFV F EAA A+ LNG + +YVG ++
Sbjct: 260 LFAKFGEVTSSSLARDQEGKTRGFGFVNFTTHEAAAQAVDELNGKDFRGQDLYVGRAQKK 319
Query: 195 QERAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
ER ++ + K+ N+Y+ NL + V D+ L+ +F +G ITSA VM+DS
Sbjct: 320 HEREEELRKSYEAARLEKANKYQGVNLYIKNLGDDVDDDKLRAMFSEYGPITSAKVMRDS 379
Query: 243 ----------------------------------------DGKSRCFGFVNFQSPDAAAA 262
GKS+ FGFV F +PD A
Sbjct: 380 LIEGSEEKDEKDKENKKEGEAEEEQKEGSEKKTEKKGDRKLGKSKGFGFVCFSNPDDATK 439
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
AV ++N + K YV AQ++ R++ L A +
Sbjct: 440 AVTEMNQRMVDGKPLYVALAQRKDVRKSQLEASIQ 474
>gi|91094515|ref|XP_971941.1| PREDICTED: similar to poly A binding protein [Tribolium castaneum]
gi|270000753|gb|EEZ97200.1| hypothetical protein TcasGA2_TC004389 [Tribolium castaneum]
Length = 565
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 265/614 (43%), Positives = 367/614 (59%), Gaps = 93/614 (15%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL +V E+ LY+ FS Q++S+RVCRD + SLGYAYVN+S +A +
Sbjct: 12 TSLYVGDLHPDVTEALLYEKFSPAGQILSLRVCRDSRTKQSLGYAYVNFSQTIEAERVLD 71
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
+NF + GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKA+ DTF+AFG +LSCKV
Sbjct: 72 TMNFDLLKGKPIRIMWSQRDPSLRKSGIGNVFIKNLDKSIDNKAMYDTFSAFGNILSCKV 131
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPK 205
AID +G SKGYGFV FE+ EAA AI+ +NGML+N K+VYVG F+ R ER ++ S K
Sbjct: 132 AIDDDGVSKGYGFVHFESIEAANKAIEKVNGMLLNGKKVYVGKFIPRAEREKEIGEKSKK 191
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
+TNVYV N +T E L +F ++GTITS +VM + DG S+ FGF+ F+ P++A AV
Sbjct: 192 YTNVYVKNFGRNLTQEQLYDLFKNYGTITSCVVMANPDGTSKGFGFIAFEEPESAEKAVT 251
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
++N N YVGRAQK++ER +L+ +EQ ++ RY +++GAN+Y+KNLDD+ ++++
Sbjct: 252 EMNNYELNGTNLYVGRAQKKSERIKELKKCYEQMKLERYNRIQGANVYIKNLDDTFDNDR 311
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L++ FS+FG ITS KVM + G SKG GF FS PEEA++A+ EM+G+MIG KP+YVA+A
Sbjct: 312 LRKEFSQFGAITSAKVMT-EGGRSKGFGFVCFSTPEEASKAITEMDGRMIGSKPIYVALA 370
Query: 386 QRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAA 445
QR E+R+A L AQ Q R+ Q + +P L PQ
Sbjct: 371 QRYEDRRAYLSAQCMQ----------------------RIRHQTM-----SPPLTTPQF- 402
Query: 446 GYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIR 505
L P P + Y+ Q+ P R Q P+
Sbjct: 403 -----------LIPTLPRF---YNHMAQIRPTPR---------WTAQVPRL--------- 430
Query: 506 YLDNARNGTDQSVVSMVP-VPFEVSGMPATPV-ETPRPVP---VPISTLTSALASASP-- 558
NGT + ++P P+ + P + + RP+ VPI+ S +++P
Sbjct: 431 ------NGTYN--MPLLPATPYRSTSRPQVQINRSARPITGQQVPIARPNSKYTASAPPR 482
Query: 559 --------------DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPE 604
DD+ RMLGE++Y ++E P A K+TGMLLE+D +E+ L+ +
Sbjct: 483 GVSVGVGNGGDPGADDK-RMLGERMYRVIEKTYPEIAGKITGMLLEIDISELKALVNNEG 541
Query: 605 ALKTKVAEAMAVLQ 618
+LK KV EA+AVLQ
Sbjct: 542 SLKAKVEEAVAVLQ 555
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 198 AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK-SRCFGFVNFQS 256
++Q + T++YV +L VT+ L + F G I S V +DS K S + +VNF
Sbjct: 3 SRQGILFPLTSLYVGDLHPDVTEALLYEKFSPAGQILSLRVCRDSRTKQSLGYAYVNFSQ 62
Query: 257 PDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
A ++ +N K + +Q R+ LR K N+++KN
Sbjct: 63 TIEAERVLDTMNFDLLKGKPIRIMWSQ----RDPSLR------------KSGIGNVFIKN 106
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
LD SI+++ + + FS FG I SCKV +D G SKG GF F E A +A+ ++NG ++
Sbjct: 107 LDKSIDNKAMYDTFSAFGNILSCKVAIDDDGVSKGYGFVHFESIEAANKAIEKVNGMLLN 166
Query: 377 RKPLYVAVAQRKEERKARL 395
K +YV + ER+ +
Sbjct: 167 GKKVYVGKFIPRAEREKEI 185
>gi|85097328|ref|XP_960425.1| polyadenylate-binding protein [Neurospora crassa OR74A]
gi|74696454|sp|Q7S6N6.1|PABP_NEUCR RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|28921916|gb|EAA31189.1| polyadenylate-binding protein [Neurospora crassa OR74A]
Length = 764
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 282/682 (41%), Positives = 385/682 (56%), Gaps = 98/682 (14%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD R SLGYAYVNY+ D A
Sbjct: 59 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKAL 118
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I G+P RIM+S RDP++RK+G GN+FIKNLD +IDNKAL DTFAAFG +LSCK
Sbjct: 119 EELNYTLIKGRPCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFGNILSCK 178
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA D +G SKGYGFV +E +EAA AIK +NGML+N+K+VYVG + +++R + +
Sbjct: 179 VAQDEHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 238
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTNVYV N+ VTDE+ +++F FG +TS+ + +D +GKSR FGFVNF + +AAA AV
Sbjct: 239 NFTNVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQEGKSRGFGFVNFTTHEAAAQAV 298
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
++LNG + YVGRAQK+ ERE +LR +E R+ + K +G NLY+KNL D ++D+
Sbjct: 299 DELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLGDDVDDD 358
Query: 325 KLKELFSEFGTITSCKVMVD---------------------------------------- 344
KL+ +FSE+G ITS KVM D
Sbjct: 359 KLRAMFSEYGPITSAKVMRDSLIEGSEEKDEKDKENKKEGETKEEEQNEGSEKKTEKKGD 418
Query: 345 -QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ G SKG GF FS P++AT+A+ EMN +M+ KPLYVA+AQRK+ RK++L+A Q R
Sbjct: 419 RKLGKSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVALAQRKDVRKSQLEASI-QAR 477
Query: 404 APGGMSPLA--SGIPGYHHGAPRLGPQQLYYGQGTPGLMP-PQAAGYGFQQ-QVFPGLRP 459
M A +G+P + AP +YY PG MP P G F Q + PG++
Sbjct: 478 NQLRMQQAAAQAGMPQQYMQAP------VYYAGQQPGFMPAPGGRGVPFPQGGIVPGVQG 531
Query: 460 GGPNYIMPYH------LQRQVHPGQRTGVRRSG-NTHQMQQPQFMRNSNQGIRYLDNARN 512
G P PY + Q P + + G PQ+M Q + L R
Sbjct: 532 GRPGQY-PYQQGGRGGVPPQQMPPMGYPINQFGPGAFPPNTPQYMAAMGQ-VGALGGGRG 589
Query: 513 GTDQSVVSMVP--VPFEVSGMPATPVETP--RP----------------------VPVP- 545
G +P +P + G PA P P RP P+P
Sbjct: 590 GPAGRGPQGIPAGIPQGLQGGPAVPGYPPAGRPQNGGGRGTPRGNANFMAAGRGASPIPG 649
Query: 546 -------ISTLTSALASA-SPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVL 597
S L + LA+ P + +++GE L+P ++ I+P A K+TGMLLEMD E++
Sbjct: 650 APADLSAGSFLQAQLATTQDPQAQKQIIGENLFPKIQAIQPALAGKITGMLLEMDNAELI 709
Query: 598 HLIESPEALKTKVAEAMAVLQE 619
+L E AL KV EA+AV E
Sbjct: 710 NLFEDDNALNVKVQEALAVYDE 731
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 160/336 (47%), Gaps = 66/336 (19%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GN+ ++ +L+ ++ L+D F+ ++S +V +D+ S GY +V+Y + A
Sbjct: 145 TGAGNI--FIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEHGNSK-GYGFVHYETDEAA 201
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIR--------KSGYGNVFIKNLDTSIDNKALCD 134
+ A + +N M +N K ++ H P K+ + NV++KN++ + ++ +
Sbjct: 202 SQAIKHVNGMLLNEK--KVYVGHHIPKKDRQSKFEEMKANFTNVYVKNINNEVTDEEFRE 259
Query: 135 TFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRR 194
FA FG V S +A D G+S+G+GFV F EAA A+ LNG + +YVG ++
Sbjct: 260 LFAKFGEVTSSSLARDQEGKSRGFGFVNFTTHEAAAQAVDELNGKDFRGQDLYVGRAQKK 319
Query: 195 QERAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
ER ++ + K+ N+Y+ NL + V D+ L+ +F +G ITSA VM+DS
Sbjct: 320 HEREEELRKSYEAARLEKANKYQGVNLYIKNLGDDVDDDKLRAMFSEYGPITSAKVMRDS 379
Query: 243 -----------------------------------------DGKSRCFGFVNFQSPDAAA 261
GKS+ FGFV F +PD A
Sbjct: 380 LIEGSEEKDEKDKENKKEGETKEEEQNEGSEKKTEKKGDRKLGKSKGFGFVCFSNPDDAT 439
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
AV ++N + K YV AQ++ R++ L A +
Sbjct: 440 KAVTEMNQRMVDGKPLYVALAQRKDVRKSQLEASIQ 475
>gi|170674510|gb|ACB30143.1| poly(A) RNA binding protein [Epichloe festucae]
Length = 739
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 279/688 (40%), Positives = 378/688 (54%), Gaps = 108/688 (15%)
Query: 19 AAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSN 78
+A P + SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD R SLGYAYVNY++
Sbjct: 50 SAAPHPQNSASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNS 109
Query: 79 PQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAA 138
D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLD +IDNKAL DTFAA
Sbjct: 110 TSDGEKALEELNYTIIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAA 169
Query: 139 FGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA 198
FG +LSCKVA D +G SKGYGFV +E +EAAQ AIK +NGML+N+K+VYVG + +++R
Sbjct: 170 FGNILSCKVAQDEHGNSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYVGHHIPKKDRQ 229
Query: 199 Q--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQS 256
+ + FTN+YV N+ +D++ +++F +G ITS+ + +D DGKSR FGFVN+ +
Sbjct: 230 SKFEEMKANFTNIYVKNVNPEASDDEFRELFERYGEITSSSLARDQDGKSRGFGFVNYTT 289
Query: 257 PDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
++A AV++LNG + YVGRAQK+ ERE +LR +E R+ + K +G NLY+KN
Sbjct: 290 HESAYKAVDELNGKDFKGQDLYVGRAQKKHEREEELRKSYEAARLEKASKYQGVNLYIKN 349
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVD-------------------------------- 344
LDD ++DEKL+ +FSEFG ITS KVM D
Sbjct: 350 LDDDVDDEKLRHMFSEFGPITSAKVMRDAPSDGSDEEKEDEQEAEPKKEGNVVEADEEGS 409
Query: 345 ------QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQ 398
+ G SKG GF FS P++AT+A+ EM+ +MI KPLYVA+AQRK+ RK++L+A
Sbjct: 410 EKKGDKKFGKSKGFGFVCFSNPDDATKAVAEMSQRMINGKPLYVALAQRKDVRKSQLEAS 469
Query: 399 FA---QIR-----------------------APG----------------GMSPLASGIP 416
Q+R PG GM+ + G P
Sbjct: 470 IQARNQLRMQQAAAAAGMPQQYMQPPVFYGQQPGFMPQGGRGMPFPQPGMGMAGVQGGRP 529
Query: 417 GYHHGAPRLG-----PQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQ 471
G G P+ G PQQ+ PG PPQ YG +PG P +I Q
Sbjct: 530 GQFPGYPQQGGRGGVPQQMPPNMYMPGQFPPQ---YG---------QPGTPQFIAAMQAQ 577
Query: 472 RQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGM 531
+ V G Q + M N G + + Q +G
Sbjct: 578 Q---------VALGGGRGGPQGGRGMPPPNAGPGGMPGYPPNSRQGGAGRGGNGRNNNGN 628
Query: 532 PATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEM 591
P RP S L L+SA P + ++LGE ++P ++ I A K+TGMLLEM
Sbjct: 629 TNGPSPAARPEGNNGSILQQQLSSAPPAQQKQILGEVIFPKIQAINAELAGKITGMLLEM 688
Query: 592 DQTEVLHLIESPEALKTKVAEAMAVLQE 619
D TE++ LIE ALK KV EA+AV E
Sbjct: 689 DNTELISLIEDDAALKAKVEEALAVYDE 716
>gi|340939192|gb|EGS19814.1| hypothetical protein CTHT_0042990 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 777
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 283/683 (41%), Positives = 384/683 (56%), Gaps = 98/683 (14%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD R SLGYAYVNY++ D A
Sbjct: 67 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSVADGEKAL 126
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I GKP RIM+S RDP++RK+G+GN+FIKNLD +IDNKAL DTFAAFG +LSCK
Sbjct: 127 EELNYTLIKGKPCRIMWSQRDPALRKTGHGNIFIKNLDAAIDNKALHDTFAAFGNILSCK 186
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA D NG SKGYGFV +E +EAA AIK +NGML+N+K+VYVG + +++R + +
Sbjct: 187 VATDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKDRQSKFEEMKA 246
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
+TNVY+ N+ VT+E+ ++ F +G ITS+ + +D++GK R FGFVN+ + +AA V
Sbjct: 247 NYTNVYIKNINLEVTEEEFREFFSKWGEITSSTLARDAEGKPRGFGFVNYSTHASAAKCV 306
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
E++NG + YVGRAQK+ ERE +LR +E R+ + K +G NLY+KNL D ++DE
Sbjct: 307 EEMNGKEWRGQELYVGRAQKKHEREEELRKSYEAARLEKQNKYQGVNLYIKNLSDEVDDE 366
Query: 325 KLKELFSEFGTITSCKVMVD---------------------------------------- 344
KL+ +F+EFG ITS KVM D
Sbjct: 367 KLRAMFAEFGPITSAKVMRDTPPEPAKDEKNKENNKESEKEGEKKEGEGEGDKKPEVKKP 426
Query: 345 --QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQI 402
+ G SKG GF F+ P++AT+A+ EMN +M+ KPLYVA+AQRKE RK++L+A Q
Sbjct: 427 ERKLGKSKGFGFVCFANPDDATKAVAEMNQRMVDGKPLYVALAQRKEVRKSQLEASI-QA 485
Query: 403 RAPGGMSPLA--SGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAA-GYGFQQQVF--PGL 457
R M A +G+P Y + P Y GQ PG +PP A G F Q P +
Sbjct: 486 RNQLRMQQQAAQAGLPQY------MQPPVYYPGQ-QPGFLPPAAGRGMPFPQGALGMPPV 538
Query: 458 RPGGPNYIMPYHLQ--RQVHPGQRTGV---RRSGNTHQMQQPQFM--RNSNQGIRYLDNA 510
+ G P PY Q R P Q + G Q PQF+ Q L
Sbjct: 539 QGGRPGQFPPYPQQAGRGTIPPQVPMYPIGQFPGAYPQPNNPQFLAAMQQVQQAAALAGG 598
Query: 511 RNGTDQSVVSMVPVP----------FEVSGMP--------------------ATPVETPR 540
R V VP+P + +G P P P
Sbjct: 599 RGAPAGRGVPTVPIPQGIQAPGLAGYPPNGRPQNGNLGRGAGPNRSNFPAGRGAPPAGPL 658
Query: 541 PVP---VPISTLTSALASAS-PDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEV 596
VP P + L S LA+ + P + ++LGE L+P V+ ++P A K+TGMLLEMD E+
Sbjct: 659 GVPGELSPAALLQSQLAATTNPQQQKQILGENLFPKVQALQPELAGKITGMLLEMDNQEL 718
Query: 597 LHLIESPEALKTKVAEAMAVLQE 619
++LIE AL KV EAMAV +E
Sbjct: 719 INLIEDEAALVAKVNEAMAVYEE 741
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 162/335 (48%), Gaps = 63/335 (18%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G+GN+ ++ +L+ ++ L+D F+ ++S +V D++ S GY +V+Y + A
Sbjct: 153 TGHGNI--FIKNLDAAIDNKALHDTFAAFGNILSCKVATDENGNSK-GYGFVHYETDEAA 209
Query: 83 ANAKEALNFMPINGKPIRIMYS--HRDPSIR----KSGYGNVFIKNLDTSIDNKALCDTF 136
A A + +N M +N K + + Y +D + K+ Y NV+IKN++ + + + F
Sbjct: 210 AQAIKHVNGMLLNEKKVYVGYHIPKKDRQSKFEEMKANYTNVYIKNINLEVTEEEFREFF 269
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
+ +G + S +A D+ G+ +G+GFV + +A ++ +NG +++YVG ++ E
Sbjct: 270 SKWGEITSSTLARDAEGKPRGFGFVNYSTHASAAKCVEEMNGKEWRGQELYVGRAQKKHE 329
Query: 197 RAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD- 243
R ++ K+ N+Y+ NL++ V DE L+ +F FG ITSA VM+D+
Sbjct: 330 REEELRKSYEAARLEKQNKYQGVNLYIKNLSDEVDDEKLRAMFAEFGPITSAKVMRDTPP 389
Query: 244 -----------------------------------------GKSRCFGFVNFQSPDAAAA 262
GKS+ FGFV F +PD A
Sbjct: 390 EPAKDEKNKENNKESEKEGEKKEGEGEGDKKPEVKKPERKLGKSKGFGFVCFANPDDATK 449
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
AV ++N + K YV AQ++ R++ L A +
Sbjct: 450 AVAEMNQRMVDGKPLYVALAQRKEVRKSQLEASIQ 484
>gi|326931817|ref|XP_003212020.1| PREDICTED: embryonic polyadenylate-binding protein-like [Meleagris
gallopavo]
Length = 633
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 279/628 (44%), Positives = 384/628 (61%), Gaps = 52/628 (8%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
GY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 7 GYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQPADAE 66
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A + +NF I G+P+RIM+S RDP +RKSG GNVFIKNLD SIDNKAL DTF+AFG +L
Sbjct: 67 RALDTMNFEVIKGRPVRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGNIL 126
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--N 201
SCKV D NG S+G+GFV FE +EAA AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 127 SCKVVCDENG-SRGHGFVHFETQEAATRAIETMNGMLLNDRKVFVGHFKSRKEREAEFGA 185
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
+ +FTNVY+ N + + D L++IF FG S VM D+ G+S+ FGFVNF+ + A
Sbjct: 186 RAMEFTNVYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMDNTGRSKGFGFVNFEKHEEAQ 245
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ---ERISRYEKLKGANLYLKNLD 318
AV +NG N ++ YVGRAQKR ER+++L+ KFEQ ER+SRY+ G NLY+KNLD
Sbjct: 246 KAVADMNGKEINGRMVYVGRAQKRLERQSELKRKFEQMKQERVSRYQ---GVNLYVKNLD 302
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
D I+DE+L++ FS +GTITS KVM + G SKG GF FS PEEAT+A+ EMNG+++ K
Sbjct: 303 DGIDDERLRKEFSPYGTITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTK 361
Query: 379 PLYVAVAQRKEERKARLQAQF----AQIRA-PGGMSPLASGIPGYH-HGAPRLGPQQLYY 432
PLYVA+AQRKEERKA L Q+ A +RA PG PGY P+ P+ +Y
Sbjct: 362 PLYVALAQRKEERKAILTNQYMQRLATMRALPGPFLGSFQPPPGYFLPPIPQPQPRAAFY 421
Query: 433 GQGTPGLMPPQAAGYGFQQQ-----VFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGN 487
+P + P + Q +P P + P L + T + S
Sbjct: 422 ---SPSPVVPVRPATRWSAQPSRSPTYPAATPVLRAAVQPRRLVSNIS----TMRQASTQ 474
Query: 488 THQMQQPQFMRNSNQGIRYLDNARNGTDQSV-----------------VSMVPVPFEVSG 530
++ + +N G + + +AR + ++ + VP + G
Sbjct: 475 VPRLTISSLLVAANIGTQTV-SARVPSSPTLRGAPHYKYSLAMRNIQPMGSVPPGAQQVG 533
Query: 531 MPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLE 590
PA V+ P+ S LA+A P ++ +M+GE+LYPL+ + A K+TGMLLE
Sbjct: 534 EPAVHVQGQEPL------TASMLAAAPPQEQKQMIGERLYPLIHAMHASLAGKITGMLLE 587
Query: 591 MDQTEVLHLIESPEALKTKVAEAMAVLQ 618
+D +E+L L+ESPE+L +K+ EA+AVLQ
Sbjct: 588 IDNSELLLLLESPESLHSKIEEAVAVLQ 615
>gi|310798668|gb|EFQ33561.1| 4 family polyadenylate binding protein [Glomerella graminicola
M1.001]
Length = 768
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 286/727 (39%), Positives = 390/727 (53%), Gaps = 128/727 (17%)
Query: 3 ATGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRD 62
A G A A T + A P + SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD
Sbjct: 41 AQGDNADAAGPTPGSAAPHPQA--SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRD 98
Query: 63 QSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKN 122
R SLGYAYVNY+ D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKN
Sbjct: 99 AVTRRSLGYAYVNYNTTSDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKN 158
Query: 123 LDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIN 182
LD +IDNKAL DTFAAFG +LSCKVA D +G SKGYGFV +E +EAA AIK +NGML+N
Sbjct: 159 LDVAIDNKALHDTFAAFGNILSCKVAQDEHGNSKGYGFVHYETDEAASQAIKHVNGMLLN 218
Query: 183 DKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMK 240
+K+VYVG + +++R + + FTN+YV N+A VTD++ + +F FG +TS+ + +
Sbjct: 219 EKKVYVGHHIPKKDRQSKFEEMKANFTNIYVKNIANEVTDDEFRDLFTAFGDVTSSSLAR 278
Query: 241 DSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQER 300
D +GKSR FGFVNF + +AAA AV+ LNG + YVGRAQK+ ERE +LR +E R
Sbjct: 279 DQEGKSRGFGFVNFTTHEAAAKAVDDLNGKDFRGQDLYVGRAQKKHEREEELRKSYEAAR 338
Query: 301 ISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ--------------- 345
+ + K +G NLY+KNLDD ++DEKL++LF++FG ITS KVM D
Sbjct: 339 MEKASKYQGVNLYIKNLDDEVDDEKLRQLFADFGPITSAKVMRDNATESGNEDEGSSDDK 398
Query: 346 ------------------------------------HGFSKGSGFAAFSMPEEATRALNE 369
HG SKG GF FS P++AT+A+ E
Sbjct: 399 ENEPKKEEGEEKAEEAKSEDKEDADKKADKKSDKKPHGKSKGFGFVCFSNPDDATKAVAE 458
Query: 370 MNGKMIGRKPLYVAVAQRKEERKARLQAQFA---QIRA---------------------- 404
MN +M+ KPLYVA+AQRK+ RK++L+A Q+R
Sbjct: 459 MNQRMVNGKPLYVALAQRKDVRKSQLEASIQARNQLRMQQAAAAAGMPQQYMQPPVFYAA 518
Query: 405 -----------------PG-GMSPLASGIPG-YHHGAPRLG-----PQQLYYGQGTPGLM 440
PG M + G PG + G P+ G PQQ+ G PG
Sbjct: 519 GQQPVFPQGGRGMAFPQPGMAMPAVQGGRPGQFPGGYPQQGGRGGLPQQMPPVYGIPGQF 578
Query: 441 PPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQV--------HPGQRTGVRRSGNTHQMQ 492
PP A P +PG P ++ +Q G R V +
Sbjct: 579 PPGA----------PYPQPGNPQFLAAIQQVQQATMGGGRGGPQGGRGPVPQGMPMPGPG 628
Query: 493 QPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSA 552
P F N+ QG R G + + P P G PA + + + + A
Sbjct: 629 MPGFPPNARQGGNQPGAGR-GANPNAPRNAPFPQGGRGAPAQDLNSGSLIQQQL-----A 682
Query: 553 LASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAE 612
A ++P + ++LGE ++P ++ I+P A K+TGMLLEMD E+++LIE ALK KV E
Sbjct: 683 AAGSNPGQQKQILGEVIFPKIQAIQPELAGKITGMLLEMDNAELVNLIEDESALKAKVDE 742
Query: 613 AMAVLQE 619
A+ V +E
Sbjct: 743 ALGVYEE 749
>gi|406602185|emb|CCH46236.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 652
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 271/645 (42%), Positives = 383/645 (59%), Gaps = 72/645 (11%)
Query: 3 ATGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRD 62
+T A +TA A++++V SLYVG+LE ++NE+ L+++FS + QV S+RVCRD
Sbjct: 37 STSATESTAEGEQASSSSVSET--TASLYVGELEPSINEALLFEIFSPIGQVSSIRVCRD 94
Query: 63 QSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKN 122
+ SLGYAYVNY N +D A + LN+ + G+PIRIM+S RDP+ R++G GNVFIKN
Sbjct: 95 ALTKRSLGYAYVNYHNVKDGEKAIDELNYSVVKGQPIRIMWSQRDPAKRRNGEGNVFIKN 154
Query: 123 LDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIN 182
L +IDNKAL DTF+AFG +LSCKVA D+ GQSKG+GFV FE+ EAAQ AI+ +NGML+N
Sbjct: 155 LHPAIDNKALHDTFSAFGRILSCKVATDNFGQSKGFGFVHFESPEAAQAAIENVNGMLLN 214
Query: 183 DKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMK 240
+ +VYVG V R++R + V FTNVYV N+ ++E++K++F FGT+TS + K
Sbjct: 215 NNEVYVGPHVARRDRQSKLEEVIKSFTNVYVKNIDLEASEEEVKELFTPFGTVTSFYLEK 274
Query: 241 DSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQER 300
D++GKSR F FVN++ +AA ++E LN K YVGRAQK++ER +L+ ++E R
Sbjct: 275 DAEGKSRGFAFVNYEEHEAAVKSIESLNDQDYKGKKLYVGRAQKKSERLEELKKQYEAAR 334
Query: 301 ISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMP 360
I + K +G NL++KNLDDSI+DEKLKE F FGTI+S KVM+D+ G SKG GF +FS P
Sbjct: 335 IEKLTKSQGVNLFVKNLDDSIDDEKLKEEFQSFGTISSVKVMIDESGKSKGFGFVSFSSP 394
Query: 361 EEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFA---QIRAPGGMSPLASGIPG 417
EEA+RA++EMN M+ KPLYVA+AQRK+ R+++L+ Q Q+R + A G+PG
Sbjct: 395 EEASRAISEMNQHMLAGKPLYVALAQRKDVRRSQLEQQIQARNQLRLQQAAA--AGGLPG 452
Query: 418 YHHGAPRLGPQQLYY-------------------GQGTPGLMPPQAAGYGFQQQVFPGLR 458
P + QQ + GQG +PPQAAG + G R
Sbjct: 453 QFIPTPFIYGQQPQFLPPGARGPLPNQPFLIPRPGQG----LPPQAAG-----GQWVGGR 503
Query: 459 PGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSV 518
PG P Y +P Q Q PQ R +G R G
Sbjct: 504 PGQPAYGLPQEFQ--------------------QFPQGGRGGFRGGRGNGPRNQG----- 538
Query: 519 VSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENI-- 576
P P + P P +P ++ L S L + + + R+LGE+LY + +
Sbjct: 539 -GRGPAP---NAAPIDP--NAQPGAGNVAQLASILPNVPVEQQKRLLGEELYQRIVSTGK 592
Query: 577 --EPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
+P A K+TGM+L+++ E+L L+E+ E K +A ++
Sbjct: 593 AQDPESAGKITGMMLDLENQEILSLLENEELFKQHFDDAFQAYED 637
>gi|395545876|ref|XP_003774823.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 621
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 269/629 (42%), Positives = 375/629 (59%), Gaps = 49/629 (7%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V E+ LY+ FS ++S+RVCRD RSSLGYAYVN+ DA E
Sbjct: 3 SLYVGDLHHDVTEAMLYEKFSPAGPILSIRVCRDMITRSSLGYAYVNFQQSSDAQRVLET 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+N I GKP+RIM+S RDPS+RKSG GN+F+KNL+ SIDN+AL D F+ FG +LSCKV
Sbjct: 63 MNLDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLEKSIDNRALFDAFSGFGNILSCKVV 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D NG SKGYGFV FE +E+A+ AI+ +NG+++ +V+VG F R+ER + + +F
Sbjct: 123 SDENG-SKGYGFVHFETQESAEKAIEKMNGIVLKSLKVFVGHFKSRKERELELGARAREF 181
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVY+ N E + + L +IFG FG S VM D G+S+ FGFV++ + + A AV++
Sbjct: 182 TNVYIKNFGEDMDNARLGEIFGRFGRALSVKVMTDERGRSKGFGFVSYATHEDAQRAVDE 241
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
+NG N + YVGRAQK+ ER+ +L+ FEQ + R + +G NLY+KNLDD+I+DE+L
Sbjct: 242 MNGKELNGRRIYVGRAQKKGERQTELKRHFEQIKQDRVTRYQGVNLYVKNLDDTIDDERL 301
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
+ FS FGTITS KVM++ G S+G GF FS P+EA +A+ EMNGK++ KPLYVA+AQ
Sbjct: 302 RTEFSPFGTITSAKVMME-GGHSRGFGFVCFSAPDEAAKAVTEMNGKLVTSKPLYVALAQ 360
Query: 387 RKEERKARLQAQFAQIRAPGGMSPLASGIPGYHH-----------GAPRLGPQQLYYGQG 435
RKEER+A L Q+ +R + A+ + +H P + YY G
Sbjct: 361 RKEERQAHLTNQY--MRRMANIQTFANPVLNPYHQPTSSSRYIMTTVPSSQTRTSYYPYG 418
Query: 436 -TPGLMPPQAAG-YGFQQQVFPG----LRPGGPNYIMPYHLQRQVH---PGQRTGVRRSG 486
P L G G + FP +RP P P++ R P T R
Sbjct: 419 QVPQLRTSSHWGPPGGRLPPFPTVSGVVRPKTPR--PPFNPMRSASGPVPRMMTTQRVVN 476
Query: 487 NTHQM---QQPQFMRN--SNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRP 541
+Q+ +P F+ N + Q +Y RN + + +P A V T
Sbjct: 477 PPNQVFGPPRPPFIPNLRAVQQYKYAAGVRNPKRFELPMQINIPQPAVHAAAQEVLT--- 533
Query: 542 VPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIE 601
S LA A P ++ +MLGE+L+PL++ + P A K+TGMLLE+D +E+LH++E
Sbjct: 534 --------ASMLADALPQEQKQMLGERLFPLIQVMHPALAGKITGMLLEIDNSELLHMLE 585
Query: 602 SPEALKTKVAEAMAVLQ-----EAAARSD 625
SPE+L++KV EA+AVLQ EAA R +
Sbjct: 586 SPESLRSKVDEAVAVLQAHQVKEAARREN 614
>gi|187956894|gb|AAI58031.1| 1810053B01Rik protein [Mus musculus]
Length = 607
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 271/600 (45%), Positives = 372/600 (62%), Gaps = 25/600 (4%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V ES LY++FS + ++S+RVCRD + R SLGYAY+N+ P DA A +
Sbjct: 12 SLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I G+PIRIM+SHRDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG++LS KV
Sbjct: 72 MNFEVIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKVV 131
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
+ +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F RQ+R + + F
Sbjct: 132 YNEHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALGF 190
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TN+YV NL V ++ L+ +F FG + S VM+DS+G+SR FGFVNF+ + A AV+
Sbjct: 191 TNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDH 250
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
+NG + ++ YVGRAQKRAER+++L+ +FEQ + R + +G NLY+KNLDDSINDE+L
Sbjct: 251 MNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDERL 310
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
KE+FS +G ITS KVM + SKG GF FS PEEAT+A+ EMNG+++G KPLYVA+AQ
Sbjct: 311 KEVFSTYGVITSAKVMTES-SHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 387 RKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAG 446
RKEERKA L Q+ + + +S P+ Q +YY G+ M P
Sbjct: 370 RKEERKAILTNQYRRRPSHPVLSSFQQPTSYLLPAVPQSTAQAVYYSSGSITPMQPDPR- 428
Query: 447 YGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTH-QMQQPQFMRNSNQGIR 505
+ Q P P + + P L HP + SG + Q P R N G +
Sbjct: 429 WTAQPHGPPSTCPPAASVVQP--LSTTQHP----CIHLSGASQVSSQVPHTQRVVNIGTQ 482
Query: 506 YLDNARNGTDQSVVSMVPVPFE-------VSGMPATPVETPRPVPVPISTLTSALASASP 558
G S+ + VP G+ + V P P+ +S LA+A
Sbjct: 483 --TTGPGGEGSSIPGQLLVPHRGTSAVHSAHGVQESAVYVPGHQPLTVSM----LAAAPL 536
Query: 559 DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
++ +M+GE+LY L+ + K+TGMLLE+D E+L L+ESPE+L K+ EA+AVLQ
Sbjct: 537 HEQKQMIGERLYSLIHDACAPLTGKITGMLLELDNLELLLLLESPESLHAKIEEAVAVLQ 596
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 107/188 (56%), Gaps = 18/188 (9%)
Query: 26 GNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANA 85
G ++YV +L NV+E +L DLFSQ + SV+V RD S S G+ +VN+ ++A A
Sbjct: 189 GFTNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRD-SNGQSRGFGFVNFEKHEEAQKA 247
Query: 86 KEALNFMPINGKPIRI----MYSHRDPSI----------RKSGYG--NVFIKNLDTSIDN 129
+ +N ++G+ + + + R + R++ Y N+++KNLD SI++
Sbjct: 248 VDHMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSIND 307
Query: 130 KALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVG 189
+ L + F+ +G + S KV +S+ SKG+GFV F + E A A+ +NG ++ K +YV
Sbjct: 308 ERLKEVFSTYGVITSAKVMTESS-HSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVA 366
Query: 190 LFVRRQER 197
L R++ER
Sbjct: 367 LAQRKEER 374
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LYV +L+ ++N+ +L ++FS + S +V + S S G+ +V +S+P++A
Sbjct: 291 YQGVNLYVKNLDDSINDERLKEVFSTYGVITSAKVMTESSH--SKGFGFVCFSSPEEATK 348
Query: 85 AKEALNFMPINGKPIRIMYSHR 106
A +N + KP+ + + R
Sbjct: 349 AVTEMNGRIVGTKPLYVALAQR 370
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD-QHGFSKGSGFAAFSMPEEATRALN 368
++LY+ +L + + L E+FS G I S +V D S G + F P +A RAL+
Sbjct: 11 SSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 369 EMNGKMIGRKPLYVAVAQR 387
MN ++I +P+ + + R
Sbjct: 71 TMNFEVIKGQPIRIMWSHR 89
>gi|166157896|ref|NP_001107551.1| polyadenylate-binding protein 1-like [Mus musculus]
gi|187960776|gb|ACD43645.1| embryonic poly(A)-binding protein [Mus musculus]
Length = 607
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 270/599 (45%), Positives = 370/599 (61%), Gaps = 23/599 (3%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V ES LY++FS + ++S+RVCRD + R SLGYAY+N+ P DA A +
Sbjct: 12 SLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I G+PIRIM+SHRDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG++LS KV
Sbjct: 72 MNFEVIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKVV 131
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
+ +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F RQ+R + + F
Sbjct: 132 YNEHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALGF 190
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TN+YV NL V ++ L+ +F FG + S VM+DS+G+SR FGFVNF+ + A AV+
Sbjct: 191 TNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDH 250
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
+NG + ++ YVGRAQKRAER+++L+ +FEQ + R + +G NLY+KNLDDSINDE+L
Sbjct: 251 MNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDERL 310
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
KE+FS +G ITS KVM + SKG GF FS PEEAT+A+ EMNG+++G KPLYVA+AQ
Sbjct: 311 KEVFSTYGVITSAKVMTES-SHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 387 RKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAG 446
RKEERKA L Q+ + + +S P+ Q +YY G+ M P
Sbjct: 370 RKEERKAILTNQYRRRPSHPVLSSFQQPTSYLLPAVPQSTAQAVYYSSGSITPMQPDPR- 428
Query: 447 YGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRY 506
+ Q P P + + P L HP R + Q P R N G +
Sbjct: 429 WTAQPHGPPSTCPPAASVVQP--LSTTQHPCIHL---RGASQVSSQVPHTQRVVNIGTQ- 482
Query: 507 LDNARNGTDQSVVSMVPVPFE-------VSGMPATPVETPRPVPVPISTLTSALASASPD 559
G S+ + VP G+ + V P P+ +S LA+A
Sbjct: 483 -TTGPGGEGSSIPGQLLVPHRGTSAVHSAHGVQESAVYVPGHQPLTVSM----LAAAPLH 537
Query: 560 DRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
++ +M+GE+LY L+ + K+TGMLLE+D E+L L+ESPE+L K+ EA+AVLQ
Sbjct: 538 EQKQMIGERLYSLIHDACAPLTGKITGMLLELDNLELLLLLESPESLHAKIEEAVAVLQ 596
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 107/188 (56%), Gaps = 18/188 (9%)
Query: 26 GNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANA 85
G ++YV +L NV+E +L DLFSQ + SV+V RD S S G+ +VN+ ++A A
Sbjct: 189 GFTNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRD-SNGQSRGFGFVNFEKHEEAQKA 247
Query: 86 KEALNFMPINGKPIRI----MYSHRDPSI----------RKSGYG--NVFIKNLDTSIDN 129
+ +N ++G+ + + + R + R++ Y N+++KNLD SI++
Sbjct: 248 VDHMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSIND 307
Query: 130 KALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVG 189
+ L + F+ +G + S KV +S+ SKG+GFV F + E A A+ +NG ++ K +YV
Sbjct: 308 ERLKEVFSTYGVITSAKVMTESS-HSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVA 366
Query: 190 LFVRRQER 197
L R++ER
Sbjct: 367 LAQRKEER 374
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LYV +L+ ++N+ +L ++FS + S +V + S S G+ +V +S+P++A
Sbjct: 291 YQGVNLYVKNLDDSINDERLKEVFSTYGVITSAKVMTESSH--SKGFGFVCFSSPEEATK 348
Query: 85 AKEALNFMPINGKPIRIMYSHR 106
A +N + KP+ + + R
Sbjct: 349 AVTEMNGRIVGTKPLYVALAQR 370
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD-QHGFSKGSGFAAFSMPEEATRALN 368
++LY+ +L + + L E+FS G I S +V D S G + F P +A RAL+
Sbjct: 11 SSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 369 EMNGKMIGRKPLYVAVAQR 387
MN ++I +P+ + + R
Sbjct: 71 TMNFEVIKGQPIRIMWSHR 89
>gi|426360413|ref|XP_004047438.1| PREDICTED: polyadenylate-binding protein 1 [Gorilla gorilla
gorilla]
Length = 682
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 281/677 (41%), Positives = 391/677 (57%), Gaps = 91/677 (13%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ ++ +L+++++ LYD FS ++S +V D++ S GY +V++ + A
Sbjct: 25 SGVGNI--FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAA 80
Query: 83 ANAKEALNFMPIN-------------------------------GKPIRIMYSHRDPSIR 111
A E +N M +N GKP+RIM+S RDPS+R
Sbjct: 81 ERAIEKMNGMLLNXXXXEASNIDSENVFPAAERALDTMNFDVIKGKPVRIMWSQRDPSLR 140
Query: 112 KSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQN 171
KSG GN+FIKNLD SIDNKAL DTF+AFG +LSCKV D NG SKGYGFV FE +EAA+
Sbjct: 141 KSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAER 199
Query: 172 AIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGH 229
AI+ +NGML+ND++V+VG F R+ER + + +FTNVY+ N E + DE LK +FG
Sbjct: 200 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGK 259
Query: 230 FGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAERE 289
FG S VM D GKS+ FGFV+F+ + A AV+++NG N K YVGRAQK+ ER+
Sbjct: 260 FGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ 319
Query: 290 ADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFS 349
+L+ KFEQ + R + +G NLY+KNLDD I+DE+L++ FS FGTITS KVM++ G S
Sbjct: 320 TELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRS 378
Query: 350 KGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ----IRA- 404
KG GF FS PEEAT+A+ EMNG+++ KPLYVA+AQRKEER+A L Q+ Q +RA
Sbjct: 379 KGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAV 438
Query: 405 ------------PGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQ 452
P G + IP + A P Q+ + +P A + FQ
Sbjct: 439 PNPVINPYQPAPPSGY--FMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQN- 495
Query: 453 VFPG-LRPGGPNYIMPYHLQRQVH---PGQRTGVRRSGNTHQMQQPQ----------FMR 498
PG +RP P P+ R P + R + + Q P+ +R
Sbjct: 496 -MPGAIRPAAPR--PPFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAAAAAAATPAVR 552
Query: 499 NSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASP 558
Q +Y RN Q + + V + PA V+ P+ S LASA P
Sbjct: 553 TVPQ-YKYAAGVRN-PQQHLNAQPQVTMQ---QPAVHVQGQEPL------TASMLASAPP 601
Query: 559 DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
++ +MLGE+L+PL++ + P A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ
Sbjct: 602 QEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQ 661
Query: 619 ----EAAARSDVNEKLG 631
+ AA+ VN G
Sbjct: 662 AHQAKEAAQKAVNSATG 678
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 150/342 (43%), Positives = 210/342 (61%), Gaps = 39/342 (11%)
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LSCKV
Sbjct: 1 MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVV 60
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDK------------------------ 184
D NG SKGYGFV FE +EAA+ AI+ +NGML+N
Sbjct: 61 CDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNXXXXEASNIDSENVFPAAERALDTMN 119
Query: 185 -QVYVGLFVR--RQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD 241
V G VR +R N+++ NL +++ ++ L F FG I S V+ D
Sbjct: 120 FDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD 179
Query: 242 SDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERI 301
+G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L A+ ++
Sbjct: 180 ENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKE--- 235
Query: 302 SRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPE 361
N+Y+KN + ++DE+LK+LF +FG S KVM D+ G SKG GF +F E
Sbjct: 236 -------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 288
Query: 362 EATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 289 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 330
>gi|328773103|gb|EGF83140.1| hypothetical protein BATDEDRAFT_34010 [Batrachochytrium
dendrobatidis JAM81]
Length = 718
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 281/675 (41%), Positives = 384/675 (56%), Gaps = 86/675 (12%)
Query: 14 TSATTAAVP--SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGY 71
T+ T AA P +G SLY+GDLE +V E+ L+++F+ V V S+RVCRD R SLGY
Sbjct: 49 TAFTGAAAPIMTGATPASLYIGDLEPSVTEAMLFEVFNMVGPVASIRVCRDAVTRRSLGY 108
Query: 72 AYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
Y+NY + DA A + LN+ + G P+RIM+S+RDP++R++G GN+FIKNL T+ID+KA
Sbjct: 109 GYINYLDIADAERALDTLNYTTVRGNPVRIMWSNRDPALRRAGTGNIFIKNLHTTIDHKA 168
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L DTF+AFG +LSCK+A+D +S G+GFV +E E A+NAIK +NGML+ND+QVYVGL
Sbjct: 169 LHDTFSAFGKILSCKIAMDGE-RSLGHGFVHYETMEMAENAIKHVNGMLLNDQQVYVGLH 227
Query: 192 VRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCF 249
+ ++ER+ + KFTN+YV N+ +V + +++F FGT S ++M D +G S+ F
Sbjct: 228 ISKKERSSTIEEKRSKFTNIYVKNIDASVDQKAFEEMFHPFGTTVSCVLMVDEEGNSKEF 287
Query: 250 GFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKG 309
GFVN+++ + A AVE+++ K YVGRAQK+ ERE +LR ++E+ R + K +G
Sbjct: 288 GFVNYENHEDARRAVEEMHEKEIGGKQIYVGRAQKKFEREEELRRQYEKIREEKLSKYQG 347
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH-GFSKGSGFAAFSMPEEATRALN 368
NL++KN+D+SI+DEKL++ FS FG ITS K+MVD+ G SKG GF FS P+EAT+A+
Sbjct: 348 VNLFVKNIDESIDDEKLRQEFSVFGAITSTKIMVDEKTGISKGFGFVCFSNPDEATKAVT 407
Query: 369 EMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ--IRA-----------------PGGMS 409
EMN +M+ KP+YVA+AQRKE R+ +L AQ Q +RA PGG+
Sbjct: 408 EMNNRMLANKPIYVALAQRKEVRRQQLAAQMQQRAMRAHQQMMPPGYPGASIFYPPGGVP 467
Query: 410 PLASGI------------------PGY--HHGAPRLGPQQL--------------YYG-- 433
P A G PG H P PQQ+ Y
Sbjct: 468 PQARGYFNPQQAQQQMMARPRWTGPGQPPHMQQPGFPPQQMPPHMQQPGFPPQQQPYAIV 527
Query: 434 QGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQ--- 490
TPG PP+ RP G +H Q+ Q+ G R Q
Sbjct: 528 PATPGARPPRQT------------RPAGGRGQAIHHQGMQMPMIQQPGARPLAGYGQPGA 575
Query: 491 -----MQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVP 545
M R G +Y N RN + +G ATP PV
Sbjct: 576 AAGGVMPANVAARGRGAGFKYAPNVRNAPATGGAADAAGSATATGGAATPAPAAAGRPV- 634
Query: 546 ISTLTSA-LASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPE 604
L +A LAS D + R LGE L+PLV P A K+TGMLLEMD E+LHL+ESPE
Sbjct: 635 ---LNAATLASMPQDQQKRALGEVLFPLVHAQSPQLAGKITGMLLEMDNGELLHLLESPE 691
Query: 605 ALKTKVAEAMAVLQE 619
L +KV+EAM L+E
Sbjct: 692 TLASKVSEAMIALEE 706
>gi|213409529|ref|XP_002175535.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
gi|212003582|gb|EEB09242.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
Length = 621
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 264/601 (43%), Positives = 355/601 (59%), Gaps = 54/601 (8%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLY+G+L+ V E+ L++LF+ + V S+RVCRD R SLGYAYVN+ N +D A
Sbjct: 68 SASLYIGELDPMVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKAL 127
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
+ LN+ I G+P RIM+S RDPS+RK G GNVFIKNLD +IDNKAL DTF+AFG +LSCK
Sbjct: 128 DELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKILSCK 187
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA+D G SKGYGFV F++ ++A AI+ +NGML+NDK+VYVG + R++R + +
Sbjct: 188 VAVDELGNSKGYGFVHFDSVDSANAAIEHVNGMLLNDKKVYVGHHISRRDRQSKFEALKA 247
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTNVYV NL T+E+ K+F +G ITS + KD+ GK R F FVNF + D+A AV
Sbjct: 248 NFTNVYVKNLDLDTTEEEFTKLFEKYGKITSLSLAKDNAGKFRGFAFVNFATHDSAQQAV 307
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
++LN K YVGRAQK+ ER+ +LR ++EQ ++ + K +G NL++KNL D I+DE
Sbjct: 308 DELNDFEYKGKKLYVGRAQKKHERQEELRKQYEQMKLEKINKYQGVNLFVKNLQDEIDDE 367
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
+LK FS FGTITS KVM D++ SKG GF +S PEEAT+A+ EMN +M+ KPLYVA+
Sbjct: 368 RLKSEFSAFGTITSAKVMTDENNKSKGFGFVCYSNPEEATKAIAEMNQRMLAGKPLYVAL 427
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQA 444
AQRKE R+++L+AQ Q R + + G A + G + +G G + P A
Sbjct: 428 AQRKEVRRSQLEAQI-QARNQFRLQQQVAAAAGIPAAAVQYGAAPIVFGPGGYPMPPVNA 486
Query: 445 AGYGFQQQVFPGLRPGGPNYIMPYHLQRQV-HPGQRTGVRRSGNTHQMQQPQFMRNSNQG 503
G P + PG P I Y Q PG GV
Sbjct: 487 RG-------MP-IVPGQPGAIPMYSGMPQYGAPGAYPGV--------------------- 517
Query: 504 IRYLDNARNGTDQSVVSMVPVPFEVSGMPA-TPVETPRPVPVPISTLTSALASASPDDRT 562
P EV + P + P +P LA A ++R
Sbjct: 518 --------------------APAEVPAVEGDKPADAPTEAALPARLTAEDLARAPEENRK 557
Query: 563 RMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAA 622
+M+GE LYP V E A K+TGMLLEMD +E+L L+E+ L KV EA+AVL+E AA
Sbjct: 558 QMIGEFLYPKVYVREEELAGKITGMLLEMDNSELLELLENDGMLNEKVDEALAVLREYAA 617
Query: 623 R 623
+
Sbjct: 618 K 618
>gi|194381714|dbj|BAG64226.1| unnamed protein product [Homo sapiens]
Length = 591
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 273/607 (44%), Positives = 363/607 (59%), Gaps = 64/607 (10%)
Query: 66 RSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDT 125
R SLGYAYVN+ P DA A + +NF I GKP+RIM+S RDP +RKSG GN+FIKNLD
Sbjct: 4 RRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPPLRKSGVGNIFIKNLDK 63
Query: 126 SIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQ 185
SIDNKAL DTF+AFG +LSCKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++
Sbjct: 64 SIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRK 122
Query: 186 VYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
V VG F R+ER + + +FTNVY+ N E + DE LK +FG FG S VM D
Sbjct: 123 VSVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES 182
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
GKS+ FGFV+F+ + A AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R
Sbjct: 183 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDR 242
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEA 363
+ +G NLY+KNLDD I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEA
Sbjct: 243 ITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEA 301
Query: 364 TRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ----IRA-------------PG 406
T+A+ MNG+++ KPLYVA+AQRKEER+A L Q+ Q +RA P
Sbjct: 302 TKAVTGMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPS 361
Query: 407 GMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYI 465
G + IP + A P Q+ + +P A + FQ PG +RP P
Sbjct: 362 GY--FMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR-- 415
Query: 466 MPYHLQRQVH---PGQRTGVRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARN 512
P+ R P + R + + Q P+ +R Q +Y RN
Sbjct: 416 PPFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRN 474
Query: 513 GTD----QSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQ 568
Q V+M PA V+ P+ S LASA P ++ +MLGE+
Sbjct: 475 PQQHLNAQPQVTM--------QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGER 520
Query: 569 LYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARS 624
L+PL++ + P A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+
Sbjct: 521 LFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQK 580
Query: 625 DVNEKLG 631
VN G
Sbjct: 581 AVNSATG 587
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 110/205 (53%), Gaps = 25/205 (12%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + +++++ +L DLF + +SV+V D+S +S G+ +V++ +DA A +
Sbjct: 146 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 204
Query: 88 ALNFMPINGKPIRIMYSHR-----------------DPSIRKSGYGNVFIKNLDTSIDNK 130
+N +NGK I + + + D R G N+++KNLD ID++
Sbjct: 205 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDE 263
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L F+ FGT+ S KV ++ G+SKG+GFV F + E A A+ +NG ++ K +YV L
Sbjct: 264 RLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTGMNGRIVATKPLYVAL 322
Query: 191 FVRRQERAQQNVSPKFTNVYVNNLA 215
R++ER TN Y+ +A
Sbjct: 323 AQRKEERQAH-----LTNQYMQRMA 342
>gi|334312764|ref|XP_003339775.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
1-like [Monodelphis domestica]
Length = 614
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 277/621 (44%), Positives = 373/621 (60%), Gaps = 52/621 (8%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
GY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 7 GYPLASLYVGDLHPDVTEAMLYEKFSAAGPIMSIRVCRDVATRRSLGYAYINFQQPADAE 66
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A + +NF I G+PIRIM+S RDP +RKSG GN+FIKNLD SIDNKAL DTF+ FG +L
Sbjct: 67 RALDTMNFEVIKGRPIRIMWSQRDPGLRKSGIGNIFIKNLDDSIDNKALYDTFSTFGNIL 126
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--N 201
SCKV D NG S+G+GFV FE EAA AI +NGML+ND++V+VG F RQER +
Sbjct: 127 SCKVVCDENG-SRGFGFVHFETHEAANQAINTMNGMLLNDRKVFVGHFKSRQEREAELGA 185
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
+ +FTN+YV N + DE L+++F FG S VM D +G+SR FGFVNF+ + A
Sbjct: 186 RALEFTNIYVKNFEGDMDDECLQELFSQFGKTLSVKVMVDENGQSRGFGFVNFEKHEEAQ 245
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV +NG +V YVGRAQKR+ER+++L+ +FEQ + R + +G NLY+KNLDD I
Sbjct: 246 KAVSNMNGKELGGRVLYVGRAQKRSERQSELKRRFEQMKQERVNRYQGVNLYVKNLDDII 305
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DEKL++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG+++ KPLY
Sbjct: 306 DDEKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLY 364
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQL-YYGQGTPGLM 440
VA+AQRKEERKA L +Q+ Q +S L G+ G L PQ Y+ P
Sbjct: 365 VALAQRKEERKAILTSQYMQ-----RLSTL-RGLNG------PLFPQPTNYFLPAIP--Q 410
Query: 441 PPQAAGYGFQQQVFPGLRPGGPNY------------------IMPYHLQRQVHPGQRTGV 482
PP A + V P +RP P + ++P +R V + V
Sbjct: 411 PPARATFYSPSTVAP-VRPA-PRWTSYSPRSSCESPTXLIVLLLPATPRRTV--SNISTV 466
Query: 483 RRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGM-----PATPVE 537
R++ P R +N G + + G+ V+ V PA ++
Sbjct: 467 RQASTQVPRAGPHMQRVANIGTQTMGTGCPGSPGRAVAQYKYSSAVRNTHQVMEPAVHIQ 526
Query: 538 TPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVL 597
P+ S LASA ++ +MLG++LYPL+ I A K+TGMLLE+D +E+L
Sbjct: 527 GQEPL------TASMLASAPVQEQKQMLGDRLYPLIYGIHAQLAGKITGMLLEIDNSELL 580
Query: 598 HLIESPEALKTKVAEAMAVLQ 618
L+ESPE+L +K+ EA+A LQ
Sbjct: 581 LLLESPESLHSKIEEAIAALQ 601
>gi|268566587|ref|XP_002639761.1| C. briggsae CBR-PAB-1 protein [Caenorhabditis briggsae]
Length = 651
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 287/643 (44%), Positives = 383/643 (59%), Gaps = 66/643 (10%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y SLYVGDL +VNES L++ FS V+S+RVCRD + R SLGYAYVN+ P DA
Sbjct: 27 SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADA 86
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF ++GKP+RIM+S RDP++R+SG GN+FIKNLD IDNK++ DTF+ FG +
Sbjct: 87 ERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNI 146
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQN- 201
LSCKVAID G SKGYGFV FE EEAAQNAI+ +NGML+ K+V+VG F Q RAQ+N
Sbjct: 147 LSCKVAIDEEGSSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKF---QPRAQRNR 203
Query: 202 ----VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ KFTNVYV N E + L+K+F +GTITS VM S+GKS+ FGFV F P
Sbjct: 204 ELGETAKKFTNVYVKNFGEHYNKDTLEKLFAKYGTITSCDVM-TSEGKSKGFGFVAFAEP 262
Query: 258 DAAAAAVEKLNGT--TNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLK 315
+ A AAV+ LN + +D +V RAQK++ER A+L+ K EQ ++ R +K +G NLY+K
Sbjct: 263 EEAEAAVQALNDSPVEGSDLKLHVCRAQKKSERHAELKKKHEQHKVERMQKYQGVNLYVK 322
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI 375
NLD+S++DE LK+ F FG ITS KVM D++G SKG GF F PEEAT A++EMN KM+
Sbjct: 323 NLDESVDDEALKKQFESFGNITSAKVMTDENGRSKGFGFVCFEKPEEATTAVSEMNSKMV 382
Query: 376 GRKPLYVAVAQRKEERKARLQAQFAQIRA--------PGG--MSPLASGIPGYHHGAP-- 423
KPLYVA+AQRKE+R+A+L +Q+ Q A PGG SP G PGY+ P
Sbjct: 383 CSKPLYVALAQRKEDRRAQLASQYMQRLASMRMHTNVPGGGMYSPAQPG-PGYYVANPMQ 441
Query: 424 ----------------RLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMP 467
R GPQ Y Q M Q G + P + GGP P
Sbjct: 442 QQRNFVGGPQLARPGGRWGPQNQYPVQSQ--YMMAQGPGVYQNRMGRPQNQQGGPR--GP 497
Query: 468 YHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLD---NARNGTDQSVVSMVPV 524
QV G GVR MQ P R N G++ + Q P
Sbjct: 498 PQQYSQVAQG---GVR-------MQGPP--RVPNAGVQQQNVQRPPPQQLQQQQQRPAPS 545
Query: 525 -PFEVSGMPATPVETPRPVPVPIS----TLTSALASASPDDRTRMLGEQLYPLVENIEPV 579
P + PRP + I T+ L++A+P ++ ++LGE++Y L+E + P
Sbjct: 546 GPKAPPQPYNQQYQQPRPQGIVIGGQEPLTTAMLSAAAPQEQKQLLGERIYALIEKLYPG 605
Query: 580 H--ASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEA 620
H A K+TGM+LE+D +E++ +++ + ++KV EA +VL A
Sbjct: 606 HKDAGKITGMMLEIDNSELIMMLQDSDLFRSKVDEAASVLASA 648
>gi|256075085|ref|XP_002573851.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044948|emb|CCD82496.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 726
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 284/693 (40%), Positives = 384/693 (55%), Gaps = 94/693 (13%)
Query: 18 TAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYS 77
+A G N SLYVGDL V++S L FS++ V+S RVCRD + R SLGY YVN+
Sbjct: 3 VSAASQGLMNSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFE 62
Query: 78 NPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFA 137
+P+ A A E LN+ + G+PIRIM+S RDPS+RKSG GN+FIKNLD SI+ K L DTF+
Sbjct: 63 DPKHAEQALEVLNYESLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFS 122
Query: 138 AFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
FG +LSCK+ +D NGQSKGYGFV FE EE A+ AI+ +N M+I D+ VYVG F+ + ER
Sbjct: 123 FFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGKFIPKTER 182
Query: 198 AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
Q KF N+Y+ N +E LK++F FG I SA VMKDS+GKS+ FGFV F P
Sbjct: 183 KSQARKVKFNNLYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSEGKSKGFGFVCFLDP 242
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK-LKGANLYLKN 316
D A AV+ ++G + Y RAQ++ ER+ +L+ + E++R R + NLY+KN
Sbjct: 243 DHAENAVKTMHGKEIEGRALYCARAQRKEERQEELKQRLEKQRAERQSSYMLNVNLYVKN 302
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
LDD+I+D++L+E FS G+ITS KVM D + SKG GF F+ PE+A RA+ +MNG +IG
Sbjct: 303 LDDNIDDKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVTDMNGTIIG 362
Query: 377 RKPLYVAVAQRKEERKARL----QAQFAQIRAPGGMSPLASGIPGYHHGAPR--LGP--- 427
KPLYVA+AQRKE+R+A+L Q + AQ R P ++ + +PG H AP P
Sbjct: 363 SKPLYVALAQRKEDRRAKLIEEHQQRMAQYRNP--VASMIPAVPG--HAAPHSFFPPAFQ 418
Query: 428 --QQLYY--------------GQGTP---GLMP--PQAAGY----------------GFQ 450
Q+ Y+ G P G +P P AGY F
Sbjct: 419 QTQRFYHPSGAVLSSQPRWNRAAGIPAQIGGLPNRPPVAGYYPSAPNPAAITANQMASFA 478
Query: 451 QQVFPGLR----PGGPNYIMPYHLQRQVHPGQRTGVRR--SGNTHQMQQPQFMRNSNQGI 504
Q PG+ P G + I HLQ Q +R + + PQ + + G+
Sbjct: 479 QFRTPGVNRPMVPNGMSSIPSTHLQTAAVFNQTANQQRQQASGRQGVVVPQVLGATAGGL 538
Query: 505 RYLDNARN----------GTDQSVVSMVPVPFEVSGMP-----ATPVE--------TPRP 541
A + Q V S VP SGM AT V + +P
Sbjct: 539 NQRPTAASVVAGPPSVNPAMRQQVASQVPRAVMHSGMSNITSTATNVRFHQTARNVSAQP 598
Query: 542 VPVP---ISTL-----------TSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
VP +STL SALA S +D+ R LGE LYP ++ + P A+K+TGM
Sbjct: 599 TLVPAGSMSTLLQPLGDQGQLTISALAQLSEEDQKRTLGEHLYPRIKAMYPNLANKLTGM 658
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQEA 620
LL +D EV++L+ES E L+ K E + VL+ +
Sbjct: 659 LLGVDNAEVINLLESEELLRAKCEEGINVLRSS 691
>gi|6754972|ref|NP_035163.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
gi|473092|emb|CAA53572.1| polyA binding protein, testis-enriched isoform [Mus musculus]
gi|29835142|gb|AAH51134.1| Poly(A) binding protein, cytoplasmic 2 [Mus musculus]
gi|148678113|gb|EDL10060.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
Length = 628
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 264/626 (42%), Positives = 374/626 (59%), Gaps = 34/626 (5%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V E+ LY+ FS ++S+RV RD R SLGYA VN+ P DA A +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDT 71
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I GKP+RIM+S RDPS+R+SG GNVFIKNL+ +IDNKAL DTF+AFG +LSCKV
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVV 131
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D NG SKG+GFV FE EEAA+ AI+ +NGML+ND++V+VG F ++ER + + +F
Sbjct: 132 SDENG-SKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGTGTKEF 190
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVY+ N + + DE L +FG FG I S VM D GKS+ FGFV+F+ + A AV++
Sbjct: 191 TNVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDE 250
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
+NG N K YVGRAQK+ +R +L+ KFEQ + + +G NLY+KNLDD I+DE+L
Sbjct: 251 MNGKELNGKHIYVGRAQKKDDRHTELKHKFEQVTQDKSIRYQGINLYVKNLDDGIDDERL 310
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
++ FS FGTITS KVM + G SKG GF FS PEEAT+A++EMNG+++ KPLYVA+AQ
Sbjct: 311 QKEFSPFGTITSTKVMTE-GGRSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALAQ 369
Query: 387 RKEERKARLQAQFAQIRAP--GGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPG-LMPPQ 443
RKEER+A L Q+ Q A G +P+ P + PQ P + P+
Sbjct: 370 RKEERQAHLTNQYIQRMASVRSGPNPVNPYQPASSSYSVAAVPQTQNCVPCCPSQIAQPR 429
Query: 444 AAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQG 503
+ Q P P P I P + + T VR S + Q+ + N++
Sbjct: 430 PSARWIAQGSRPHPFPNVPGAIHPAAPRSSL-----TTVRPSSSHVQVTTAHRITNTSAQ 484
Query: 504 I--RYLDNARNGTDQSVVSMVPVPF-------------EVSGMPATPVETPRPVPVPIST 548
I + A + T V S+ + +++ PA ++ P
Sbjct: 485 ITGQRPAPASSATATPVHSIPQYKYAAGVQNSQQHLNAQLAQQPAVCIQGQEP------- 537
Query: 549 LTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
T+++ +P + +MLGE+L+PL++ + P A K+TGMLL++D +E L ++ESP + +
Sbjct: 538 WTASMLVTAPQEPKQMLGERLFPLIQAMHPTLAGKITGMLLDIDNSEPLRMLESPVSRCS 597
Query: 609 KVAEAMAVLQEAAARSDVNEKLGSLA 634
+ EA+A LQ + + +GS +
Sbjct: 598 RAEEAVATLQAHQVKEAAQKAVGSTS 623
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 162/298 (54%), Gaps = 23/298 (7%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GNV ++ +L + ++ LYD FS ++S +V D++ S G+ +V++ + A
Sbjct: 96 SGVGNV--FIKNLNKTIDNKALYDTFSAFGNILSCKVVSDEN--GSKGHGFVHFETEEAA 151
Query: 83 ANAKEALNFMPINGKPIRI-MYSHRDPSIRKSGYG-----NVFIKNLDTSIDNKALCDTF 136
A E +N M +N + + + + + + G G NV+IKN +D++ L F
Sbjct: 152 ERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGTGTKEFTNVYIKNFGDRMDDETLNGLF 211
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG +LS KV D G+SKG+GFV FE E AQ A+ +NG +N K +YVG ++ +
Sbjct: 212 GRFGQILSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQKKDD 271
Query: 197 R----------AQQNVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG 244
R Q+ S ++ N+YV NL + + DE L+K F FGTITS VM + G
Sbjct: 272 RHTELKHKFEQVTQDKSIRYQGINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEG-G 330
Query: 245 KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
+S+ FGFV F SP+ A AV ++NG K YV AQ++ ER+A L ++ Q S
Sbjct: 331 RSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALAQRKEERQAHLTNQYIQRMAS 388
>gi|348552994|ref|XP_003462312.1| PREDICTED: polyadenylate-binding protein 4-like isoform 1 [Cavia
porcellus]
Length = 660
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/387 (58%), Positives = 283/387 (73%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE+LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG N K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRKFEQLK 284
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 554 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 611
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 612 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 656
>gi|156064711|ref|XP_001598277.1| hypothetical protein SS1G_00363 [Sclerotinia sclerotiorum 1980]
gi|154691225|gb|EDN90963.1| hypothetical protein SS1G_00363 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 784
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 288/718 (40%), Positives = 388/718 (54%), Gaps = 124/718 (17%)
Query: 17 TTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNY 76
T P + SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD R SLGYAYVNY
Sbjct: 50 TPTNAPHPQASASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAITRRSLGYAYVNY 109
Query: 77 SNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTF 136
+ D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLD +IDNKAL DTF
Sbjct: 110 NTTVDGEKALEELNYTLIKGRPCRIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTF 169
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
AAFG +LSCKVA D +G SKGYGFV +E +EAA AIK +NGML+N+K+V+VG + +++
Sbjct: 170 AAFGNILSCKVAQDESGASKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVFVGHHIPKKD 229
Query: 197 RAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFGFVN 253
R + + FTN+YV N+ T+E+ +++F FG +TSA + +D++ GKSR FGFVN
Sbjct: 230 RQSKFEEMKANFTNIYVKNIPVEATEEEFRELFEKFGDVTSASLARDTESGKSRGFGFVN 289
Query: 254 FQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLY 313
F + + AA AV++LNG + YVGRAQK+ ERE +LR +E R+ + K +G NLY
Sbjct: 290 FINHEHAATAVDELNGKDFKGQDLYVGRAQKKHEREEELRRSYEAARMEKASKYQGVNLY 349
Query: 314 LKNLDDSINDEKLKELFSEFGTITSCKVMVDQH--------------------------- 346
+KNLDD I+DEKL+ELF+ FG ITS KVM D
Sbjct: 350 VKNLDDEIDDEKLRELFAPFGAITSAKVMRDTPAETADAEDKKEKDEEKNKENKKEGEAE 409
Query: 347 -------------GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
G SKG GF F+ P+EAT+A+++MN +M+ KPLYVA+AQRK+ RK+
Sbjct: 410 TEEASAPKAKRPLGKSKGFGFVCFNNPDEATKAVSDMNQRMVSNKPLYVALAQRKDVRKS 469
Query: 394 RLQAQFA---QIR---------------------APGGMSP--LASG------------- 414
+L+A QIR PG P L G
Sbjct: 470 QLEASIQARNQIRMQQAAAQAGMPQQYMQAPMFFPPGAQQPGFLPQGGRGMQFPPQAGMP 529
Query: 415 IPGYHHGAP-----RLGPQQLYYGQGTPG--LMPPQAAGYGFQQQVFPGLRPGGPNYIM- 466
IPG G P PQQ G+G P MPP G G PG P G Y
Sbjct: 530 IPGAQAGRPGQFQAGFPPQQA--GRGAPAGQQMPPNMYGMG------PGQFPAGGQYPQQ 581
Query: 467 --PYHLQRQVH------PGQRTGVRRSGNTHQM---------QQ--PQFMRNSNQGIRYL 507
P L R G G M QQ PQF + + QG
Sbjct: 582 NNPQFLAAMQAAQAAQLSAGRGGPNARGPMQGMPPNMAMPMGQQGMPQFQQGARQGGMPG 641
Query: 508 DNARNGTDQSVVSMVP------VPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDR 561
A+ G P +P ++ GMP P + P+ VP + L + + S P +
Sbjct: 642 RGAQAGRPGQFAGGFPPQAGRGMPQQIPGMPQMP-QMPQEGGVPTTLLQAQVQSVPPQQQ 700
Query: 562 TRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
++LGE L+P ++ ++P A K+TGMLLEM+ E+++LIE +L+ KV EA+ V E
Sbjct: 701 KQILGEALFPKIQVLQPELAGKITGMLLEMENQELINLIEDDASLRAKVDEALTVYDE 758
>gi|348552996|ref|XP_003462313.1| PREDICTED: polyadenylate-binding protein 4-like isoform 2 [Cavia
porcellus]
Length = 644
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/387 (58%), Positives = 283/387 (73%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE+LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG N K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 538 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 595
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 596 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 640
>gi|431922543|gb|ELK19486.1| Polyadenylate-binding protein 4 [Pteropus alecto]
Length = 720
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/387 (58%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG N KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEINGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEINGKVIFVGRAQKKVERQAELKRKFEQLK 284
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 67/89 (75%), Gaps = 7/89 (7%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 540 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 597
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
E+D +E+LH++ESPE+L++KV EA+AVLQ
Sbjct: 598 EIDNSELLHMLESPESLRSKVDEAVAVLQ 626
>gi|256075089|ref|XP_002573853.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044950|emb|CCD82498.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 688
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 284/683 (41%), Positives = 380/683 (55%), Gaps = 94/683 (13%)
Query: 18 TAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYS 77
+A G N SLYVGDL V++S L FS++ V+S RVCRD + R SLGY YVN+
Sbjct: 3 VSAASQGLMNSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFE 62
Query: 78 NPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFA 137
+P+ A A E LN+ + G+PIRIM+S RDPS+RKSG GN+FIKNLD SI+ K L DTF+
Sbjct: 63 DPKHAEQALEVLNYESLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFS 122
Query: 138 AFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
FG +LSCK+ +D NGQSKGYGFV FE EE A+ AI+ +N M+I D+ VYVG F+ + ER
Sbjct: 123 FFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGKFIPKTER 182
Query: 198 AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
Q KF N+Y+ N +E LK++F FG I SA VMKDS+GKS+ FGFV F P
Sbjct: 183 KSQARKVKFNNLYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSEGKSKGFGFVCFLDP 242
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK-LKGANLYLKN 316
D A AV+ ++G + Y RAQ++ ER+ +L+ + E++R R + NLY+KN
Sbjct: 243 DHAENAVKTMHGKEIEGRALYCARAQRKEERQEELKQRLEKQRAERQSSYMLNVNLYVKN 302
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
LDD+I+D++L+E FS G+ITS KVM D + SKG GF F+ PE+A RA+ +MNG +IG
Sbjct: 303 LDDNIDDKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVTDMNGTIIG 362
Query: 377 RKPLYVAVAQRKEERKARL----QAQFAQIRAPGGMSPLASGIPGYHHGAPR--LGP--- 427
KPLYVA+AQRKE+R+A+L Q + AQ R P ++ + +PG H AP P
Sbjct: 363 SKPLYVALAQRKEDRRAKLIEEHQQRMAQYRNP--VASMIPAVPG--HAAPHSFFPPAFQ 418
Query: 428 --QQLYY--------------GQGTP---GLMP--PQAAGY----------------GFQ 450
Q+ Y+ G P G +P P AGY F
Sbjct: 419 QTQRFYHPSGAVLSSQPRWNRAAGIPAQIGGLPNRPPVAGYYPSAPNPAAITANQMASFA 478
Query: 451 QQVFPGL-RPGGPN---YIMPYHLQRQVHPGQRTGVRR--SGNTHQMQQPQFMRNSNQGI 504
Q PG+ RP PN I HLQ Q +R + + PQ + + G+
Sbjct: 479 QFRTPGVNRPMVPNGMSSIPSTHLQTAAVFNQTANQQRQQASGRQGVVVPQVLGATAGGL 538
Query: 505 RYLDNARN----------GTDQSVVSMVPVPFEVSGMP-----ATPVE--------TPRP 541
A + Q V S VP SGM AT V + +P
Sbjct: 539 NQRPTAASVVAGPPSVNPAMRQQVASQVPRAVMHSGMSNITSTATNVRFHQTARNVSAQP 598
Query: 542 VPVP---ISTL-----------TSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
VP +STL SALA S +D+ R LGE LYP ++ + P A+K+TGM
Sbjct: 599 TLVPAGSMSTLLQPLGDQGQLTISALAQLSEEDQKRTLGEHLYPRIKAMYPNLANKLTGM 658
Query: 588 LLEMDQTEVLHLIESPEALKTKV 610
LL +D EV++L+ES E L+ KV
Sbjct: 659 LLGVDNAEVINLLESEELLRAKV 681
>gi|395548760|ref|XP_003775245.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 730
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 262/627 (41%), Positives = 366/627 (58%), Gaps = 60/627 (9%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL V E+ LY+ FS ++S+RVCRD SLGYAYVN+ + DA
Sbjct: 111 SLYVGDLHHEVTEAMLYEKFSPAGPILSIRVCRDAVTHRSLGYAYVNFQHLADAERVMTD 170
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+N I GKP+R+M+S RDPS+RKSG GNVF+KNL+ SI+NK+L D F++FG +LSCKV
Sbjct: 171 MNLYIIKGKPVRLMWSQRDPSLRKSGIGNVFVKNLEKSINNKSLYDAFSSFGNILSCKVI 230
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D NG SKGYGFV FE+ E+A+ AI+ +NG+L+ND +++VG F R++R + + +F
Sbjct: 231 TDDNG-SKGYGFVHFEHRESAERAIQKMNGILLNDLKIFVGHFKSRKDRESELGAQTREF 289
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVY+ N E + ++ L KIF FG S VM+D G+S+ FGFVNFQ + A A++
Sbjct: 290 TNVYIKNFGEDMDEDRLSKIFEKFGPTLSVKVMRDDCGRSKGFGFVNFQKHEDAQNAIDN 349
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
+NG N + Y GRAQK+ ER+ L+ FEQ + +R + +G NLY+KNLDD I+DE L
Sbjct: 350 MNGKELNGRQIYAGRAQKKLERQTQLQRHFEQLKQNRIVRYQGVNLYIKNLDDDIDDENL 409
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
++ FS FGTITS KVM++ +G SKG GF FS PEEAT A+ EMNG+++ KPLYVA+AQ
Sbjct: 410 RKEFSSFGTITSAKVMMN-NGRSKGFGFVCFSAPEEATTAVTEMNGRLVASKPLYVALAQ 468
Query: 387 RKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAG 446
RKEERKA L Q+ Q A ++ P G R G Y+ TP L Q+ G
Sbjct: 469 RKEERKAHLANQYVQRMA----RIRSTATPTL--GPYRTGASSRYF--FTP-LTQSQSRG 519
Query: 447 YGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRY 506
+ F LR P+ ++V + +G H P+F R+ +
Sbjct: 520 AYYSPNHFAQLRSS------PHWSAQRVRSHSFQTI--TGPIH----PKFCRSPLMSTSH 567
Query: 507 LDNARNG---TDQSVVSMVPVPFEVSGMPATPVETPRP------------------VPVP 545
+ +R T Q V S + T + T R +P
Sbjct: 568 MSTSRISRRITTQRVTSPAHTLRPLCPPGTTFIPTLRSTQQYKYTGANYNHYQFIGIPPR 627
Query: 546 ISTLTSAL--------------ASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEM 591
I TLT L ++A P + R+LGE+L+PL++++ P A K+TGMLL+
Sbjct: 628 IPTLTRQLVAHLPGQEPAIPSTSTALPQPQKRVLGERLFPLIQDLHPTLAGKITGMLLDR 687
Query: 592 DQTEVLHLIESPEALKTKVAEAMAVLQ 618
+E+L ++ SPE L++K++EAMAVLQ
Sbjct: 688 QNSEILRMLNSPECLRSKISEAMAVLQ 714
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 160/297 (53%), Gaps = 16/297 (5%)
Query: 108 PSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENE 166
P+ S ++++ +L + L + F+ G +LS +V D+ +S GY +V F++
Sbjct: 102 PNSPNSTMASLYVGDLHHEVTEAMLYEKFSPAGPILSIRVCRDAVTHRSLGYAYVNFQHL 161
Query: 167 EAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKI 226
A+ + +N +I K V + R + + NV+V NL +++ ++ L
Sbjct: 162 ADAERVMTDMNLYIIKGKPVRLMWSQRDPSLRKSGIG----NVFVKNLEKSINNKSLYDA 217
Query: 227 FGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRA 286
F FG I S V+ D +G S+ +GFV+F+ ++A A++K+NG ND +VG + R
Sbjct: 218 FSSFGNILSCKVITDDNG-SKGYGFVHFEHRESAERAIQKMNGILLNDLKIFVGHFKSRK 276
Query: 287 EREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH 346
+RE++L A+ + N+Y+KN + +++++L ++F +FG S KVM D
Sbjct: 277 DRESELGAQTRE----------FTNVYIKNFGEDMDEDRLSKIFEKFGPTLSVKVMRDDC 326
Query: 347 GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF F E+A A++ MNGK + + +Y AQ+K ER+ +LQ F Q++
Sbjct: 327 GRSKGFGFVNFQKHEDAQNAIDNMNGKELNGRQIYAGRAQKKLERQTQLQRHFEQLK 383
>gi|410263248|gb|JAA19590.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410263254|gb|JAA19593.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/397 (57%), Positives = 287/397 (72%), Gaps = 12/397 (3%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D +GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPL 411
+G KPLYVA+AQRKEERKA L Q+ Q A GM L
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQREA--GMRAL 392
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 554 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 611
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 612 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 656
>gi|350585908|ref|XP_003482078.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Sus scrofa]
Length = 660
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/387 (58%), Positives = 283/387 (73%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE+LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLK 284
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 554 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 611
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 612 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 656
>gi|395853068|ref|XP_003799042.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Otolemur
garnettii]
Length = 662
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/387 (58%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 556 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 613
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 614 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 658
>gi|338721949|ref|XP_003364451.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Equus
caballus]
Length = 660
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/387 (58%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLK 284
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 76/104 (73%), Gaps = 7/104 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 554 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 611
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSL 633
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++
Sbjct: 612 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAV 655
>gi|410966840|ref|XP_003989935.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Felis catus]
Length = 660
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/387 (58%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLK 284
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 554 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 611
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 612 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 656
>gi|410263250|gb|JAA19591.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 644
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/397 (57%), Positives = 287/397 (72%), Gaps = 12/397 (3%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D +GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPL 411
+G KPLYVA+AQRKEERKA L Q+ Q A GM L
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQREA--GMRAL 392
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 538 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 595
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 596 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 640
>gi|426215226|ref|XP_004001875.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Ovis aries]
Length = 660
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/387 (58%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE+LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 554 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 611
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 612 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 656
>gi|344287653|ref|XP_003415567.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Loxodonta
africana]
Length = 660
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/387 (58%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
>gi|261199248|ref|XP_002626025.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239594233|gb|EEQ76814.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
Length = 783
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 293/700 (41%), Positives = 383/700 (54%), Gaps = 109/700 (15%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ +V E+ L++LFS + QV S+RVCRD R SLGYAYVNY+N D A
Sbjct: 54 SASLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 113
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I GKP RIM+S RDP++RK+G GNVFIKNLDT+IDNKAL DTFAAFG +LSCK
Sbjct: 114 EDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 173
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA D G SKGYGFV +E EAA NAIK +NGML+N+K+V+VG + +++R + +
Sbjct: 174 VAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKA 233
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFGFVNFQSPDAAAAA 263
FTNVYV NL VT+E+ +++FG +G ITSA + DS+ GKSR FGFVNF ++AAAA
Sbjct: 234 NFTNVYVKNLDTKVTNEEFRELFGKYGDITSASITHDSETGKSRGFGFVNFVKHESAAAA 293
Query: 264 VEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIND 323
VE+LN + YVGRAQK+ ERE +LR + E R+ + K +G NLY+KNL D I+D
Sbjct: 294 VEELNDKEFKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNLTDDIDD 353
Query: 324 EKLKELFSEFGTITSCKVMVD--------------------------------------- 344
EKL++LF FG ITS +VM D
Sbjct: 354 EKLRDLFIGFGNITSARVMRDTIADAGSESEKEKEISNKENVKEEAKKESAEEESSDKSD 413
Query: 345 -------------QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEER 391
+ G SKG GF FS P+EA++A+ EMN +M+ KPLYVA+AQRK+ R
Sbjct: 414 KAEKSDSKKTLEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKPLYVALAQRKDVR 473
Query: 392 KARLQAQFA--------QIRAPGGMS-----PLASGIPGYHHGAPRLGPQQ--LYYGQ-- 434
K++L+A Q+ A GMS P PG P Q+ + +GQ
Sbjct: 474 KSQLEASIQARNTIRQQQVAAAAGMSQPFMQPAVYYPPGQQGFIPTNAGQRGGMAFGQQP 533
Query: 435 -----GTPG-----------------------LMPPQAAGYGFQQQVFPGLR-PGG-PNY 464
G PG +PP A G G Q L+ PGG PN
Sbjct: 534 GMVLPGMPGGRPGQFAGGFPGQQGGRGINPNQQLPPNAFGMGAQGLPMGALQGPGGLPNG 593
Query: 465 IMPYHLQRQVHPGQRTGVRRSGNTHQMQ-QPQFMRNSNQGIRYLDNA-RNGTDQSVVSMV 522
+ QV G G MQ P M N+ G+R A G V
Sbjct: 594 LSYPQAIAQVQASFGRGGGGRGQAPGMQGMPPSMGNA-PGMRAGGQAFTQGRGMPPQQGV 652
Query: 523 PVPFEVSGMPATPVE--TPRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPV 579
P + +G A P + PR TL AL++A P + +MLGE +YP ++ +P
Sbjct: 653 ARPGQ-AGRGAGPAQGMPPRDESAGGPTLNLQALSAAPPAQQKQMLGEAIYPKIQAQQPE 711
Query: 580 HASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
A K+TGMLLEMD E+L L++ AL+ KV EA+ V E
Sbjct: 712 LAGKITGMLLEMDNAELLSLVDDEAALRAKVDEAINVYDE 751
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 158/300 (52%), Gaps = 20/300 (6%)
Query: 108 PSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENE 166
PS + ++++ LD+S+ L + F++ G V S +V D+ +S GY +V + N
Sbjct: 47 PSTTQPHSASLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 106
Query: 167 EAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKI 226
+ A++ LN LI K + ++ +R ++ NV++ NL + ++ L
Sbjct: 107 ADGERALEDLNYTLIKGKPCRI-MWSQRDPALRKTGQ---GNVFIKNLDTAIDNKALHDT 162
Query: 227 FGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRA 286
F FG I S V +D G S+ +GFV++++ +AA A++ +NG N+K +VG +
Sbjct: 163 FAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKK 222
Query: 287 EREADLRAKFEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
+R+ S++E++K N+Y+KNLD + +E+ +ELF ++G ITS + D
Sbjct: 223 DRQ------------SKFEEMKANFTNVYVKNLDTKVTNEEFRELFGKYGDITSASITHD 270
Query: 345 -QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ G S+G GF F E A A+ E+N K + LYV AQ+K ER+ L+ Q R
Sbjct: 271 SETGKSRGFGFVNFVKHESAAAAVEELNDKEFKGQKLYVGRAQKKHEREEELRKQHEAAR 330
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 170/359 (47%), Gaps = 74/359 (20%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D+ S GY +V+Y + A
Sbjct: 140 TGQGNV--FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGNSK-GYGFVHYETAEAA 196
Query: 83 ANAKEALNFMPINGKPIRIMY--SHRDPSIR----KSGYGNVFIKNLDTSIDNKALCDTF 136
NA + +N M +N K + + + + +D + K+ + NV++KNLDT + N+ + F
Sbjct: 197 TNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNLDTKVTNEEFRELF 256
Query: 137 AAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ 195
+G + S + DS G+S+G+GFV F E+A A++ LN +++YVG ++
Sbjct: 257 GKYGDITSASITHDSETGKSRGFGFVNFVKHESAAAAVEELNDKEFKGQKLYVGRAQKKH 316
Query: 196 ERAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-- 241
ER ++ + K+ N+YV NL + + DE L+ +F FG ITSA VM+D
Sbjct: 317 EREEELRKQHEAARVEKASKYQGVNLYVKNLTDDIDDEKLRDLFIGFGNITSARVMRDTI 376
Query: 242 -----------------------------------------SDGK---------SRCFGF 251
SD K S+ FGF
Sbjct: 377 ADAGSESEKEKEISNKENVKEEAKKESAEEESSDKSDKAEKSDSKKTLEKKLGKSKGFGF 436
Query: 252 VNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGA 310
V F +PD A+ AV ++N N K YV AQ++ R++ L A + R +++ A
Sbjct: 437 VCFSNPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRKSQLEASIQARNTIRQQQVAAA 495
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 21/208 (10%)
Query: 198 AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQS 256
A P ++YV L +VT+ L ++F G + S V +D+ +S + +VN+ +
Sbjct: 46 APSTTQPHSASLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNN 105
Query: 257 PDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
A+E LN T K + +Q R+ LR K N+++KN
Sbjct: 106 TADGERALEDLNYTLIKGKPCRIMWSQ----RDPALR------------KTGQGNVFIKN 149
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
LD +I+++ L + F+ FG I SCKV D+ G SKG GF + E AT A+ +NG ++
Sbjct: 150 LDTAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLN 209
Query: 377 RKPLYVAVAQRKEERKARLQAQFAQIRA 404
K ++V K++R Q++F +++A
Sbjct: 210 EKKVFVGHHIAKKDR----QSKFEEMKA 233
>gi|73976763|ref|XP_857000.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Canis lupus
familiaris]
Length = 644
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/387 (58%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 538 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 595
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 596 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 640
>gi|410966842|ref|XP_003989936.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Felis catus]
Length = 644
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/387 (58%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 538 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 595
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 596 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 640
>gi|351713677|gb|EHB16596.1| Polyadenylate-binding protein 4 [Heterocephalus glaber]
Length = 661
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/387 (58%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
>gi|344287651|ref|XP_003415566.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Loxodonta
africana]
Length = 644
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/387 (58%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 538 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 595
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 596 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 640
>gi|139948570|ref|NP_001077193.1| polyadenylate-binding protein 4 [Bos taurus]
gi|134024563|gb|AAI34510.1| PABPC4 protein [Bos taurus]
gi|296488909|tpg|DAA31022.1| TPA: poly A binding protein, cytoplasmic 4 [Bos taurus]
Length = 645
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/387 (58%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE+LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 539 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 596
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 597 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 641
>gi|335291035|ref|XP_003127861.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Sus scrofa]
Length = 644
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/387 (58%), Positives = 283/387 (73%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE+LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 538 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 595
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 596 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 640
>gi|332248413|ref|XP_003273358.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|355557859|gb|EHH14639.1| hypothetical protein EGK_00600 [Macaca mulatta]
gi|383411103|gb|AFH28765.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
gi|384941238|gb|AFI34224.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
Length = 660
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/387 (58%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 554 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 611
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 612 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 656
>gi|239615396|gb|EEQ92383.1| polyadenylate-binding protein [Ajellomyces dermatitidis ER-3]
gi|327356743|gb|EGE85600.1| polyadenylate-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 783
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 293/700 (41%), Positives = 383/700 (54%), Gaps = 109/700 (15%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ +V E+ L++LFS + QV S+RVCRD R SLGYAYVNY+N D A
Sbjct: 54 SASLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 113
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I GKP RIM+S RDP++RK+G GNVFIKNLDT+IDNKAL DTFAAFG +LSCK
Sbjct: 114 EDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 173
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA D G SKGYGFV +E EAA NAIK +NGML+N+K+V+VG + +++R + +
Sbjct: 174 VAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKA 233
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFGFVNFQSPDAAAAA 263
FTNVYV NL VT+E+ +++FG +G ITSA + DS+ GKSR FGFVNF ++AAAA
Sbjct: 234 NFTNVYVKNLDTEVTNEEFRELFGKYGDITSASITHDSETGKSRGFGFVNFVKHESAAAA 293
Query: 264 VEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIND 323
VE+LN + YVGRAQK+ ERE +LR + E R+ + K +G NLY+KNL D I+D
Sbjct: 294 VEELNDKEFKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNLTDDIDD 353
Query: 324 EKLKELFSEFGTITSCKVMVD--------------------------------------- 344
EKL++LF FG ITS +VM D
Sbjct: 354 EKLRDLFIGFGNITSARVMRDTIADAGSESEKEKEISNKENVKEEAKKESAEEESSDKSD 413
Query: 345 -------------QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEER 391
+ G SKG GF FS P+EA++A+ EMN +M+ KPLYVA+AQRK+ R
Sbjct: 414 KAEKSDSKKTLEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKPLYVALAQRKDVR 473
Query: 392 KARLQAQFA--------QIRAPGGMS-----PLASGIPGYHHGAPRLGPQQ--LYYGQ-- 434
K++L+A Q+ A GMS P PG P Q+ + +GQ
Sbjct: 474 KSQLEASIQARNTIRQQQVAAAAGMSQPFMQPAVYYPPGQQGFIPANAGQRGGMAFGQQP 533
Query: 435 -----GTPG-----------------------LMPPQAAGYGFQQQVFPGLR-PGG-PNY 464
G PG +PP A G G Q L+ PGG PN
Sbjct: 534 GMVLPGMPGGRPGQFAGGFPGQQGGRGINPNQQLPPNAFGMGAQGLPMGALQGPGGLPNG 593
Query: 465 IMPYHLQRQVHPGQRTGVRRSGNTHQMQ-QPQFMRNSNQGIRYLDNA-RNGTDQSVVSMV 522
+ QV G G MQ P M N+ G+R A G V
Sbjct: 594 LSYPQAIAQVQASFGRGGGGRGQAPGMQGMPPSMGNA-PGMRAGGQAFTQGRGMPPQQGV 652
Query: 523 PVPFEVSGMPATPVE--TPRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPV 579
P + +G A P + PR TL AL++A P + +MLGE +YP ++ +P
Sbjct: 653 ARPGQ-AGRGAGPAQGMPPRDESAGGPTLNLQALSAAPPAQQKQMLGEAIYPKIQAQQPE 711
Query: 580 HASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
A K+TGMLLEMD E+L L++ AL+ KV EA+ V E
Sbjct: 712 LAGKITGMLLEMDNAELLSLVDDEAALRAKVDEAINVYDE 751
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 158/300 (52%), Gaps = 20/300 (6%)
Query: 108 PSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENE 166
PS + ++++ LD+S+ L + F++ G V S +V D+ +S GY +V + N
Sbjct: 47 PSTTQPHSASLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 106
Query: 167 EAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKI 226
+ A++ LN LI K + ++ +R ++ NV++ NL + ++ L
Sbjct: 107 ADGERALEDLNYTLIKGKPCRI-MWSQRDPALRKTGQ---GNVFIKNLDTAIDNKALHDT 162
Query: 227 FGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRA 286
F FG I S V +D G S+ +GFV++++ +AA A++ +NG N+K +VG +
Sbjct: 163 FAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKK 222
Query: 287 EREADLRAKFEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
+R+ S++E++K N+Y+KNLD + +E+ +ELF ++G ITS + D
Sbjct: 223 DRQ------------SKFEEMKANFTNVYVKNLDTEVTNEEFRELFGKYGDITSASITHD 270
Query: 345 -QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ G S+G GF F E A A+ E+N K + LYV AQ+K ER+ L+ Q R
Sbjct: 271 SETGKSRGFGFVNFVKHESAAAAVEELNDKEFKGQKLYVGRAQKKHEREEELRKQHEAAR 330
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 170/359 (47%), Gaps = 74/359 (20%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D+ S GY +V+Y + A
Sbjct: 140 TGQGNV--FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGNSK-GYGFVHYETAEAA 196
Query: 83 ANAKEALNFMPINGKPIRIMY--SHRDPSIR----KSGYGNVFIKNLDTSIDNKALCDTF 136
NA + +N M +N K + + + + +D + K+ + NV++KNLDT + N+ + F
Sbjct: 197 TNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNLDTEVTNEEFRELF 256
Query: 137 AAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ 195
+G + S + DS G+S+G+GFV F E+A A++ LN +++YVG ++
Sbjct: 257 GKYGDITSASITHDSETGKSRGFGFVNFVKHESAAAAVEELNDKEFKGQKLYVGRAQKKH 316
Query: 196 ERAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-- 241
ER ++ + K+ N+YV NL + + DE L+ +F FG ITSA VM+D
Sbjct: 317 EREEELRKQHEAARVEKASKYQGVNLYVKNLTDDIDDEKLRDLFIGFGNITSARVMRDTI 376
Query: 242 -----------------------------------------SDGK---------SRCFGF 251
SD K S+ FGF
Sbjct: 377 ADAGSESEKEKEISNKENVKEEAKKESAEEESSDKSDKAEKSDSKKTLEKKLGKSKGFGF 436
Query: 252 VNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGA 310
V F +PD A+ AV ++N N K YV AQ++ R++ L A + R +++ A
Sbjct: 437 VCFSNPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRKSQLEASIQARNTIRQQQVAAA 495
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 21/208 (10%)
Query: 198 AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQS 256
A P ++YV L +VT+ L ++F G + S V +D+ +S + +VN+ +
Sbjct: 46 APSTTQPHSASLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNN 105
Query: 257 PDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
A+E LN T K + +Q R+ LR K N+++KN
Sbjct: 106 TADGERALEDLNYTLIKGKPCRIMWSQ----RDPALR------------KTGQGNVFIKN 149
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
LD +I+++ L + F+ FG I SCKV D+ G SKG GF + E AT A+ +NG ++
Sbjct: 150 LDTAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLN 209
Query: 377 RKPLYVAVAQRKEERKARLQAQFAQIRA 404
K ++V K++R Q++F +++A
Sbjct: 210 EKKVFVGHHIAKKDR----QSKFEEMKA 233
>gi|119113388|ref|XP_309558.3| AGAP011092-PA [Anopheles gambiae str. PEST]
gi|116131767|gb|EAA05186.3| AGAP011092-PA [Anopheles gambiae str. PEST]
Length = 634
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/376 (57%), Positives = 282/376 (75%), Gaps = 5/376 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLHSDITEATLFEKFSSAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF PI G+PIRIM+S RDPS+RKSG GNVFIKNLD IDNKA+ DTF+AFG +LSCKVA
Sbjct: 63 MNFDPIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKKIDNKAMYDTFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D GQSKGYGFV FE EE+A +I+ +NGML+N+K+VYVG F+ R+ER ++ + F
Sbjct: 123 QDEKGQSKGYGFVHFETEESANTSIEKVNGMLLNEKKVYVGRFISRKEREKELGEKAKLF 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV N E +T+E L+ +F FG ITS VM DGKSR FGFV F+ P+ A AV+K
Sbjct: 183 TNVYVKNFGEDLTEEALRDMFEKFGPITSHRVM-TKDGKSRGFGFVAFEKPEDAEEAVQK 241
Query: 267 LNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LNG +D KV YVGRAQK+ ER+ +L+ +FEQ ++ R + G NLY+KNLDD+I+DE+
Sbjct: 242 LNGKELSDGKVLYVGRAQKKNERQMELKRRFEQLKMERLTRYHGVNLYVKNLDDTIDDER 301
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L++ F+ +GTITS KVM+D+ G SKG GF FS P+EAT+A+ EMNG+++G KPLYVA+A
Sbjct: 302 LRKEFAPYGTITSAKVMLDE-GRSKGFGFVCFSAPDEATKAVTEMNGRIVGSKPLYVALA 360
Query: 386 QRKEERKARLQAQFAQ 401
QRKEERK+ L +Q+ Q
Sbjct: 361 QRKEERKSHLASQYIQ 376
>gi|426215228|ref|XP_004001876.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Ovis aries]
Length = 644
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/387 (58%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE+LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 538 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 595
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 596 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 640
>gi|208431833|ref|NP_001129125.1| polyadenylate-binding protein 4 isoform 1 [Homo sapiens]
gi|332808508|ref|XP_513344.3| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pan
troglodytes]
gi|395730714|ref|XP_002811047.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pongo abelii]
gi|397488842|ref|XP_003815452.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pan paniscus]
gi|426329062|ref|XP_004025563.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Gorilla
gorilla gorilla]
gi|66267552|gb|AAH94755.1| PABPC4 protein [Homo sapiens]
gi|119627668|gb|EAX07263.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_c [Homo sapiens]
gi|410227598|gb|JAA11018.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410227604|gb|JAA11021.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/387 (58%), Positives = 283/387 (73%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D +GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 166/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D +G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 554 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 611
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 612 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 656
>gi|448112633|ref|XP_004202146.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
gi|359465135|emb|CCE88840.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
Length = 625
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 267/628 (42%), Positives = 374/628 (59%), Gaps = 52/628 (8%)
Query: 2 EATGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCR 61
+ T ++ +A ++ +P + SLYVG+L +VNE+ L+++FS V QV S+RVCR
Sbjct: 26 QETNVSSGNEGEDAADSSQLPDT--SASLYVGELNPSVNEALLFEIFSPVGQVSSIRVCR 83
Query: 62 DQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIK 121
D + SLGYAYVN+ +D A E LN+ I+G+P RIM+S RDPS+R++G GN+FIK
Sbjct: 84 DAVTKKSLGYAYVNFHKLEDGEKAIEELNYSLIDGRPCRIMWSQRDPSLRRNGEGNIFIK 143
Query: 122 NLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLI 181
NL +IDNKAL DTF+AFG +LSCKVA D G SK +GFV +E EAA+ AI+ +NGML+
Sbjct: 144 NLHPAIDNKALHDTFSAFGKILSCKVATDEQGNSKCFGFVHYETAEAAKAAIENVNGMLL 203
Query: 182 NDKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVM 239
ND++VYVG V +++R + + FTNVYV N+ ++E+++K+F +G ITS +
Sbjct: 204 NDREVYVGKHVSKKDRESKFEEMKANFTNVYVKNIDLGFSEEEMRKLFEPYGKITSLHLE 263
Query: 240 KDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQE 299
KD++GKS+ FGFVNF+S +AA AVE+LN N + YVGRAQK+ ER +L+ ++E
Sbjct: 264 KDAEGKSKGFGFVNFESHEAAVKAVEELNDKDINGQKLYVGRAQKKRERIEELKRQYEAA 323
Query: 300 RISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSM 359
R+ + K +G NL++KNLDDSI+ KL+E F FGTITS +VMVD+HG SKG GF FS
Sbjct: 324 RLEKLSKYQGVNLFVKNLDDSIDSVKLEEEFKPFGTITSARVMVDEHGKSKGFGFVCFSS 383
Query: 360 PEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLAS--GIPG 417
PEEAT+A+ EMN +M KPLYVA+AQRK+ R+++L+ Q Q R M A+ GIPG
Sbjct: 384 PEEATKAITEMNQRMFHGKPLYVALAQRKDVRRSQLEQQI-QARNQMRMQNAAATGGIPG 442
Query: 418 YHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPG 477
+ P ++YGQ PG PP G FPG P ++P + Q+ P
Sbjct: 443 QF-----IPP--MFYGQ-QPGFFPPNGRGSA----PFPG---PNPQMMVP---RGQIPPP 484
Query: 478 QRTGVRRSGNTHQMQQPQFMRNSNQGIR--YLDNARNGTDQSVVSMVPVPFEVSGMPATP 535
Q R N + P + GI Y D A + P G P
Sbjct: 485 QGQWPRAGPNGQPV--PVY------GIPPVYGDFAAANGGRQQRGYYPNRQNQKGRPQ-- 534
Query: 536 VETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENI----EPVHASKVTGMLLEM 591
L + LASA D + R+LGE+LYP + + EP A K+TGM+L++
Sbjct: 535 -----------KDLAALLASAPVDQQKRILGEELYPKIVSTGRAQEPEAAGKITGMMLDL 583
Query: 592 DQTEVLHLIESPEALKTKVAEAMAVLQE 619
D E+L L+E +A+ +E
Sbjct: 584 DNQEILALLEDDALFNNHFEDALTAYEE 611
>gi|119627673|gb|EAX07268.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_h [Homo sapiens]
Length = 661
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/387 (58%), Positives = 283/387 (73%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D +GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
>gi|48734702|gb|AAH71591.1| PABPC4 protein [Homo sapiens]
Length = 660
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/387 (58%), Positives = 283/387 (73%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D +GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 166/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D +G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 554 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 611
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 612 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 656
>gi|403292058|ref|XP_003937074.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 659
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/387 (58%), Positives = 283/387 (73%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D +GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 166/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D +G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 77/118 (65%), Gaps = 6/118 (5%)
Query: 517 SVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENI 576
SV S P + PA V+ P+ S LA+A P ++ +MLGE+L+PL++ +
Sbjct: 544 SVRSPHPAIQPLQAQPAVHVQGQEPL------TASMLAAAPPQEQKQMLGERLFPLIQTM 597
Query: 577 EPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 598 HSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 655
>gi|402854027|ref|XP_003891682.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Papio anubis]
Length = 660
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/387 (58%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 554 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 611
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 612 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 656
>gi|14029147|gb|AAK51123.1| polyadenylated mRNA-binding protein 2 [Anemia phyllitidis]
Length = 472
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 260/483 (53%), Positives = 323/483 (66%), Gaps = 38/483 (7%)
Query: 178 GMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAI 237
GMLINDKQV V FVRRQER N + KF NV+V NLAE TDEDL ++FG FG I+SA+
Sbjct: 1 GMLINDKQVVVTPFVRRQERELTNAATKFNNVFVKNLAEETTDEDLMEVFGGFGPISSAV 60
Query: 238 VMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
VM+D++G S+CFGFVNF++ D AA AVE +NG NDK WYVGRAQK++EREA+L+ KFE
Sbjct: 61 VMRDANGNSKCFGFVNFKNADDAAKAVENINGKVFNDKEWYVGRAQKKSEREAELKVKFE 120
Query: 298 QERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAF 357
Q R R EK +G NLYLKN+DDSI+DEKLKELFS FGT+ SCK+M G GSGF A
Sbjct: 121 QLRKERTEKFQGVNLYLKNVDDSIDDEKLKELFSGFGTVNSCKIMRSPQGQIVGSGFVAL 180
Query: 358 SMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASG--I 415
S +EA RA+NEMNGKM+G KPLYVAVAQRK+ER+A+LQAQFAQ+R P +G
Sbjct: 181 SSKDEAMRAVNEMNGKMVGSKPLYVAVAQRKDERRAKLQAQFAQLRNVVANVPQMNGSPG 240
Query: 416 PGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGG---PNYIMPYHLQR 472
P Y P +G QQ+YYGQ GL+PPQ +G+G+Q + PG+RPGG PNY +P +QR
Sbjct: 241 PLYPPRPPAMG-QQVYYGQPPHGLLPPQPSGFGYQHPMVPGMRPGGPQMPNYFLP-AVQR 298
Query: 473 QVHPGQRTGVRRSGNTHQMQQPQFM--------------RNSNQGIRYLDNARNGTDQSV 518
GQR G RR G P F+ R +++ +RY ++R D S+
Sbjct: 299 PGQQGQRMGNRRPG-------PPFLHQQQQPLMQQQMAPRGNSRPMRYSQSSRVAPDVSL 351
Query: 519 VSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEP 578
+ ++ G A P + + +P ASASP+ + MLGEQLYPLV+ +E
Sbjct: 352 QGYSSL--DMGG--ALPNSSDTGLYMPALASAL--ASASPEQQRVMLGEQLYPLVDRLEH 405
Query: 579 VHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVN----EKLGSLA 634
HA KVTGMLLEMDQTEVLHLIESPEALK KVAEAM VLQ A A + + + SL+
Sbjct: 406 DHAGKVTGMLLEMDQTEVLHLIESPEALKAKVAEAMDVLQMAQANAGASTNGIDHFASLS 465
Query: 635 VNE 637
+NE
Sbjct: 466 LNE 468
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 111/198 (56%), Gaps = 12/198 (6%)
Query: 115 YGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIK 174
+ NVF+KNL ++ L + F FG + S V D+NG SK +GFV F+N + A A++
Sbjct: 29 FNNVFVKNLAEETTDEDLMEVFGGFGPISSAVVMRDANGNSKCFGFVNFKNADDAAKAVE 88
Query: 175 MLNGMLINDKQVYVGLFVRRQERA----------QQNVSPKF--TNVYVNNLAETVTDED 222
+NG + NDK+ YVG ++ ER ++ + KF N+Y+ N+ +++ DE
Sbjct: 89 NINGKVFNDKEWYVGRAQKKSEREAELKVKFEQLRKERTEKFQGVNLYLKNVDDSIDDEK 148
Query: 223 LKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRA 282
LK++F FGT+ S +M+ G+ GFV S D A AV ++NG K YV A
Sbjct: 149 LKELFSGFGTVNSCKIMRSPQGQIVGSGFVALSSKDEAMRAVNEMNGKMVGSKPLYVAVA 208
Query: 283 QKRAEREADLRAKFEQER 300
Q++ ER A L+A+F Q R
Sbjct: 209 QRKDERRAKLQAQFAQLR 226
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 17/185 (9%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
+++V +L + + L ++F + S V RD + S + +VN+ N DAA A E
Sbjct: 31 NVFVKNLAEETTDEDLMEVFGGFGPISSAVVMRDANGNSKC-FGFVNFKNADDAAKAVEN 89
Query: 89 LNFMPINGK---------------PIRIMYSH-RDPSIRKSGYGNVFIKNLDTSIDNKAL 132
+N N K +++ + R K N+++KN+D SID++ L
Sbjct: 90 INGKVFNDKEWYVGRAQKKSEREAELKVKFEQLRKERTEKFQGVNLYLKNVDDSIDDEKL 149
Query: 133 CDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFV 192
+ F+ FGTV SCK+ GQ G GFV +++ A A+ +NG ++ K +YV +
Sbjct: 150 KELFSGFGTVNSCKIMRSPQGQIVGSGFVALSSKDEAMRAVNEMNGKMVGSKPLYVAVAQ 209
Query: 193 RRQER 197
R+ ER
Sbjct: 210 RKDER 214
>gi|395853070|ref|XP_003799043.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Otolemur
garnettii]
Length = 646
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/387 (58%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 540 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 597
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 598 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 642
>gi|119627667|gb|EAX07262.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_b [Homo sapiens]
Length = 645
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/387 (58%), Positives = 283/387 (73%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D +GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
>gi|4504715|ref|NP_003810.1| polyadenylate-binding protein 4 isoform 2 [Homo sapiens]
gi|332808510|ref|XP_003308042.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730716|ref|XP_003775777.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pongo abelii]
gi|397488844|ref|XP_003815453.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pan paniscus]
gi|426329066|ref|XP_004025565.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Gorilla
gorilla gorilla]
gi|12229875|sp|Q13310.1|PABP4_HUMAN RecName: Full=Polyadenylate-binding protein 4; Short=PABP-4;
Short=Poly(A)-binding protein 4; AltName:
Full=Activated-platelet protein 1; Short=APP-1; AltName:
Full=Inducible poly(A)-binding protein; Short=iPABP
gi|1163177|gb|AAC50350.1| inducible poly(A)-binding protein [Homo sapiens]
gi|2801403|gb|AAB97309.1| polyadenylate binding protein [Homo sapiens]
gi|119627669|gb|EAX07264.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_d [Homo sapiens]
gi|410227600|gb|JAA11019.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|1585757|prf||2201474A inducible poly(A)-binding protein
Length = 644
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/387 (58%), Positives = 283/387 (73%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D +GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 166/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D +G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 538 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 595
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 596 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 640
>gi|149693775|ref|XP_001503500.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Equus
caballus]
Length = 644
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/387 (58%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLK 284
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 76/104 (73%), Gaps = 7/104 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 538 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 595
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSL 633
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++
Sbjct: 596 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAV 639
>gi|403292060|ref|XP_003937075.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 643
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/387 (58%), Positives = 283/387 (73%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D +GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 166/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D +G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 77/118 (65%), Gaps = 6/118 (5%)
Query: 517 SVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENI 576
SV S P + PA V+ P+ S LA+A P ++ +MLGE+L+PL++ +
Sbjct: 528 SVRSPHPAIQPLQAQPAVHVQGQEPL------TASMLAAAPPQEQKQMLGERLFPLIQTM 581
Query: 577 EPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 582 HSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 639
>gi|256075087|ref|XP_002573852.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044949|emb|CCD82497.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 724
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 278/691 (40%), Positives = 381/691 (55%), Gaps = 92/691 (13%)
Query: 18 TAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYS 77
+A G N SLYVGDL V++S L FS++ V+S RVCRD + R SLGY YVN+
Sbjct: 3 VSAASQGLMNSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFE 62
Query: 78 NPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFA 137
+P+ A A E LN+ + G+PIRIM+S RDPS+RKSG GN+FIKNLD SI+ K L DTF+
Sbjct: 63 DPKHAEQALEVLNYESLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFS 122
Query: 138 AFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
FG +LSCK+ +D NGQSKGYGFV FE EE A+ AI+ +N M+I D+ VYVG F+ + ER
Sbjct: 123 FFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGKFIPKTER 182
Query: 198 AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
Q KF N+Y+ N +E LK++F FG I SA VMKDS+GKS+ FGFV F P
Sbjct: 183 KSQARKVKFNNLYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSEGKSKGFGFVCFLDP 242
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK-LKGANLYLKN 316
D A AV+ ++G + Y RAQ++ ER+ +L+ + E++R R + NLY+KN
Sbjct: 243 DHAENAVKTMHGKEIEGRALYCARAQRKEERQEELKQRLEKQRAERQSSYMLNVNLYVKN 302
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
LDD+I+D++L+E FS G+ITS KVM D + SKG GF F+ PE+A RA+ +MNG +IG
Sbjct: 303 LDDNIDDKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVTDMNGTIIG 362
Query: 377 RKPLYVAVAQRKEERKARL----QAQFAQIRAPGGMSPLASGIPGYHHGAPR--LGP--- 427
KPLYVA+AQRKE+R+A+L Q + AQ R P ++ + +PG H AP P
Sbjct: 363 SKPLYVALAQRKEDRRAKLIEEHQQRMAQYRNP--VASMIPAVPG--HAAPHSFFPPAFQ 418
Query: 428 --QQLYY--------------GQGTP---GLMP--PQAAGY----------------GFQ 450
Q+ Y+ G P G +P P AGY F
Sbjct: 419 QTQRFYHPSGAVLSSQPRWNRAAGIPAQIGGLPNRPPVAGYYPSAPNPAAITANQMASFA 478
Query: 451 QQVFPGLR----PGGPNYIMPYHLQRQVHPGQRTGVRR--SGNTHQMQQPQFMRNSNQGI 504
Q PG+ P G + I HLQ Q +R + + PQ + + G+
Sbjct: 479 QFRTPGVNRPMVPNGMSSIPSTHLQTAAVFNQTANQQRQQASGRQGVVVPQVLGATAGGL 538
Query: 505 RYLDNARN--------GTDQSVVSMVPVPFEVSGMP-----ATPVE--------TPRPVP 543
A + V S VP SGM AT V + +P
Sbjct: 539 NQRPTAASVVAGPPSVNPAMRVASQVPRAVMHSGMSNITSTATNVRFHQTARNVSAQPTL 598
Query: 544 VPISTLTSAL--------------ASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
VP ++++ L A S +D+ R LGE LYP ++ + P A+K+TGMLL
Sbjct: 599 VPAGSMSTLLQPLGDQGQLTISALAQLSEEDQKRTLGEHLYPRIKAMYPNLANKLTGMLL 658
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEA 620
+D EV++L+ES E L+ K E + VL+ +
Sbjct: 659 GVDNAEVINLLESEELLRAKCEEGINVLRSS 689
>gi|417403696|gb|JAA48646.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 660
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/387 (58%), Positives = 283/387 (73%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E + DE LK++F FG S VM+D +GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 166/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D +G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLK 284
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 74/115 (64%), Gaps = 13/115 (11%)
Query: 533 ATPVETPRPVPVPIST-------------LTSALASASPDDRTRMLGEQLYPLVENIEPV 579
A+ V +P P P+ S LA+A P ++ +MLGE+L+PL++ +
Sbjct: 542 ASSVRSPHPAIPPLQASQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSN 601
Query: 580 HASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 602 LAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 656
>gi|149244358|ref|XP_001526722.1| polyadenylate-binding protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|158514320|sp|A5DW14.1|PABP_LODEL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|146449116|gb|EDK43372.1| polyadenylate-binding protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 661
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 269/649 (41%), Positives = 377/649 (58%), Gaps = 41/649 (6%)
Query: 2 EATGAAAATAAVTSATTAAVPSGYG--NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRV 59
E++ A +++ SA SG + SLYVG+L +VNE+ L+++FS + QV S+RV
Sbjct: 39 ESSDATSSSVPADSAEEQGESSGIAENSASLYVGELNPSVNEATLFEIFSPIGQVASIRV 98
Query: 60 CRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVF 119
CRD + SLGYAYVNY +D A E LN+ P+ G+P RIM+S RDPS R+SG GN+F
Sbjct: 99 CRDAVSKKSLGYAYVNYHKLEDGEKAIEELNYTPVEGRPCRIMWSQRDPSARRSGDGNIF 158
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGM 179
IKNL +IDNKAL DTF+AFG +LS KVA D GQSK +GFV +E EEAAQ AI+ +NGM
Sbjct: 159 IKNLHPAIDNKALHDTFSAFGKILSVKVATDDLGQSKCFGFVHYETEEAAQAAIESVNGM 218
Query: 180 LINDKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAI 237
L+ND++VYVG V +++R + + +TN+YV N+ T+++ +++F FG ITS
Sbjct: 219 LLNDREVYVGKHVSKKDRESKLEEMKANYTNIYVKNIDLAYTEKEFEELFAPFGKITSIY 278
Query: 238 VMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
+ KD++GKS+ FGFVNF+ +AAA AVE+LN N + YVGRAQK+ ER +L+ ++E
Sbjct: 279 LEKDAEGKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKIYVGRAQKKRERTEELKKQYE 338
Query: 298 QERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAF 357
R+ + K +G NL++KNLD+ I+ EKL+E F FGTITS KVMVD G SKG GF F
Sbjct: 339 AVRLEKLSKYQGVNLFVKNLDEQIDSEKLEEEFKPFGTITSSKVMVDDAGKSKGFGFVCF 398
Query: 358 SMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFA---QIRAPGGMSPLASG 414
S PEEAT+A+ EMN +M+ KPLYVA+AQRK+ R+++L+ Q Q+R + A G
Sbjct: 399 STPEEATKAITEMNQRMVNGKPLYVALAQRKDVRRSQLEQQIQARNQMRMQNAAA--AGG 456
Query: 415 IPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQV 474
+PG + P ++YGQ G PP G FP GPN M + Q
Sbjct: 457 LPGQF-----MPP--MFYGQ--QGFFPPNGRG----NAPFP-----GPNPQMMMRGRGQP 498
Query: 475 HPGQ--RTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMP 532
P Q R G PQF + Q +R + Q + P
Sbjct: 499 FPEQWPRPGPNGQPVPVYGMPPQFQDFNGQNMRPQQQQQQQQQQQQQQQQQRGY----YP 554
Query: 533 ATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLV----ENIEPVHASKVTGML 588
P VP L + +A+A + + R+LGE+LY + + EP A K+TGM+
Sbjct: 555 NRPAGG----NVPAKDLAALIANAPLEAQKRILGEELYQRIVATGKAQEPEAAGKITGMM 610
Query: 589 LEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLAVNE 637
L ++ E+L L++ E EA+ +E N G+ A +E
Sbjct: 611 LGLENQEILDLLDDEELFNNHFEEALNAFEEYKNSEGANAATGAPAPSE 659
>gi|402854029|ref|XP_003891683.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Papio anubis]
Length = 644
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/387 (58%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 538 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 595
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 596 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 640
>gi|332248415|ref|XP_003273359.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|383411101|gb|AFH28764.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
gi|384941236|gb|AFI34223.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
Length = 644
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/387 (58%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 538 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 595
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 596 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 640
>gi|417403591|gb|JAA48595.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 644
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/387 (58%), Positives = 283/387 (73%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E + DE LK++F FG S VM+D +GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 166/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D +G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLK 284
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 74/115 (64%), Gaps = 13/115 (11%)
Query: 533 ATPVETPRPVPVPIST-------------LTSALASASPDDRTRMLGEQLYPLVENIEPV 579
A+ V +P P P+ S LA+A P ++ +MLGE+L+PL++ +
Sbjct: 526 ASSVRSPHPAIPPLQASQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSN 585
Query: 580 HASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 586 LAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 640
>gi|219130188|ref|XP_002185253.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403432|gb|EEC43385.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 605
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 278/622 (44%), Positives = 375/622 (60%), Gaps = 56/622 (9%)
Query: 9 ATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSS 68
A AV SA+TA+ + + SLYVGDL +VNES L+++FS V V S+RVCRD R S
Sbjct: 21 APVAVPSASTAS-DNPFQTPSLYVGDLAPDVNESLLFEIFSAVGPVASIRVCRDAVTRRS 79
Query: 69 LGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSID 128
LGY+YVN+ DA A + +NF I GKP RIM+S RDPS+R+SG GN+F+KNL+ +ID
Sbjct: 80 LGYSYVNFHQMADAERAMDTMNFSMIKGKPCRIMWSQRDPSLRRSGVGNIFVKNLNEAID 139
Query: 129 NKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVY 187
NK L DTF+ FG +LSCKV D G S GYG+V +E EAA AI+ L+GMLI+ ++V
Sbjct: 140 NKQLYDTFSLFGNILSCKVVTDREGGVSMGYGYVHYETAEAANAAIEKLDGMLIDGQEVQ 199
Query: 188 VGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSR 247
VG F+RR +R + +TN Y+ N+ D L + F FG + SA V ++ ++
Sbjct: 200 VGHFMRRNDRPDID---SWTNCYIKNVPYEWDDARLNQEFAQFGEVLSATVSREDTNQTL 256
Query: 248 CFGFVNFQSPDAAAAAVEKLNG---TTNND-----KVWYVGRAQKRAEREADLRAKFEQE 299
FGF+NF ++A AAVE LNG TT D + YVGRAQK++ERE +LRAKFE E
Sbjct: 257 GFGFINFAEHESAVAAVEALNGKEYTTTLDGEEITQQIYVGRAQKKSERERELRAKFEAE 316
Query: 300 RISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD-QHGFSKGSGFAAFS 358
++ R K +G NLY+KNLDDS+ D+ L++ F+ GTITS +VM D + G S+G GF +S
Sbjct: 317 KMDRISKFQGVNLYVKNLDDSVTDDMLRDEFAVMGTITSARVMKDAKDGRSRGFGFVCYS 376
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGY 418
PEE+TRA+NEMNGK+I KP++VA+AQR+E R+A+L+AQ A RA G P G+
Sbjct: 377 TPEESTRAVNEMNGKLIANKPIFVALAQRREVRRAQLEAQHAN-RAGG---PGQPGMMRA 432
Query: 419 HHGAPRLGPQQLYYGQ--GTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHP 476
GAP P Y Q G G M P Y Q+ + PGG R+V
Sbjct: 433 PMGAPMGYPGMPMYMQRPGPGGGMQP---AYPMMPQM---MGPGG----------RRVPM 476
Query: 477 GQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPV 536
R G R QQP I++ RN + P
Sbjct: 477 AGRGGRGRGPMPGPGQQP---------IKFNQQVRNAGP-----------PMQNQPPHQQ 516
Query: 537 ETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEV 596
P+ +P + SALASASP+ + M+GE+LYPL+ +P A K+TGMLLEMD +E+
Sbjct: 517 GAPQAIPHEGALTASALASASPEVQKNMIGERLYPLIHQSQPELAGKITGMLLEMDNSEL 576
Query: 597 LHLIESPEALKTKVAEAMAVLQ 618
LHL+ESP+AL +K++EA+ VL+
Sbjct: 577 LHLLESPDALNSKISEALQVLE 598
>gi|291399204|ref|XP_002715240.1| PREDICTED: poly A binding protein, cytoplasmic 4-like [Oryctolagus
cuniculus]
Length = 644
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/387 (58%), Positives = 280/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK +F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKDLFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEIGGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 166/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LK+LFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDESLKDLFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK IG K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEIGGKVIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 538 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 595
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 596 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 640
>gi|390465724|ref|XP_002750686.2| PREDICTED: polyadenylate-binding protein 4 [Callithrix jacchus]
Length = 656
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/387 (58%), Positives = 283/387 (73%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D +GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFIQFGKTLSVKVMRDPNGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
>gi|444726222|gb|ELW66761.1| Polyadenylate-binding protein 1-like protein [Tupaia chinensis]
Length = 568
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 261/587 (44%), Positives = 351/587 (59%), Gaps = 45/587 (7%)
Query: 44 LYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMY 103
LY+ FS ++S+RVCRD + R SL YAY+N+ P DA A + +NF I G+PIRIM+
Sbjct: 2 LYEKFSPAGPILSIRVCRDVATRRSLCYAYINFQQPADAERALDTMNFEVIKGQPIRIMW 61
Query: 104 SHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQF 163
S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +LSCKV D +G S+G+GFV F
Sbjct: 62 SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHG-SRGFGFVHF 120
Query: 164 ENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP--KFTNVYVNNLAETVTDE 221
E +AAQ AI +NGML+ND++V+VG F R+ER + + +FTN+YV NL V +
Sbjct: 121 ETHDAAQRAISTMNGMLLNDRKVFVGHFKSRREREAELGARVMEFTNIYVKNLQVDVDER 180
Query: 222 DLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGR 281
L+ +F FG + S VM+DS G SR FGFVNF+ + A AV +NG + ++ YVGR
Sbjct: 181 GLQDLFSQFGKMLSVKVMRDSSGHSRGFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYVGR 240
Query: 282 AQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKV 341
AQKR ER+ +L+ +FEQ + R + +G NLY+KNLDDSINDEKL++ FS +G ITS KV
Sbjct: 241 AQKRLERQNELKRRFEQMKQDRLNRYQGVNLYVKNLDDSINDEKLRKEFSPYGVITSAKV 300
Query: 342 MVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ 401
M + G SKG GF FS PEEAT+A+ EMNG+++G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 301 MTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYMQ 359
Query: 402 ----IRAPGGMSPLASGI--PGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFP 455
+RA GG PL P + + G+ + P Q A Q P
Sbjct: 360 RLSTVRALGG--PLMGAFQQPTSYFLSAAPQAPAQAAYYGSGPMTPIQTAPRWTAQPPRP 417
Query: 456 G----LRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNAR 511
+RP G M HL V + VR++ Q P R G + +
Sbjct: 418 SSASMIRPPG----MTQHLSAHV-----SSVRQASTQAPHQVPHAQRMGECGGQGQEECG 468
Query: 512 NGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYP 571
+G +S V ++ + E S RP P S + GE+LYP
Sbjct: 469 HG--ESKVLVMELVLEGS--------EDRP-PWARQVCASEVVHT---------GERLYP 508
Query: 572 LVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
L+ ++ A K+TGMLLE+D +E+L ++ESPE+L K+ EA+AVLQ
Sbjct: 509 LIRDVHHQLAGKITGMLLEIDNSELLLMLESPESLHAKIEEAVAVLQ 555
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 109/207 (52%), Gaps = 31/207 (14%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
++YV +L+ +V+E L DLFSQ +++SV+V RD S S G+ +VN+ ++A A
Sbjct: 167 NIYVKNLQVDVDERGLQDLFSQFGKMLSVKVMRDSSGHSR-GFGFVNFEKHEEAQKAVVH 225
Query: 89 LNFMPINGKPIRIMYSHR--------------------DPSIRKSGYGNVFIKNLDTSID 128
+N ++G R++Y R D R G N+++KNLD SI+
Sbjct: 226 MNGKEVSG---RLLYVGRAQKRLERQNELKRRFEQMKQDRLNRYQGV-NLYVKNLDDSIN 281
Query: 129 NKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYV 188
++ L F+ +G + S KV + G SKG+GFV F + E A A+ +NG ++ K +YV
Sbjct: 282 DEKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 340
Query: 189 GLFVRRQERAQQNVSPKFTNVYVNNLA 215
L R++ER TN Y+ L+
Sbjct: 341 ALAQRKEER-----KAILTNQYMQRLS 362
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LYV +L+ ++N+ +L FS + S +V + S G+ +V +S+P++A
Sbjct: 266 YQGVNLYVKNLDDSINDEKLRKEFSPYGVITSAKVMTEGGH--SKGFGFVCFSSPEEATK 323
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDT 125
A +N + KP+ + + R RK+ N +++ L T
Sbjct: 324 AVTEMNGRIVGTKPLYVALAQRKEE-RKAILTNQYMQRLST 363
>gi|154322853|ref|XP_001560741.1| hypothetical protein BC1G_00769 [Botryotinia fuckeliana B05.10]
gi|347837080|emb|CCD51652.1| similar to polyadenylate-binding protein [Botryotinia fuckeliana]
Length = 790
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 284/724 (39%), Positives = 387/724 (53%), Gaps = 130/724 (17%)
Query: 17 TTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNY 76
T P + SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD R SLGYAYVNY
Sbjct: 50 TPTNAPHPQASASLYVGELDTSVTEAMLFELFSQIGSVASIRVCRDAISRRSLGYAYVNY 109
Query: 77 SNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTF 136
+ D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLD +IDNKAL DTF
Sbjct: 110 NTTADGEKALEELNYTLIKGRPCRIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTF 169
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
AAFG +LSCKVA D +G SKGYGFV +E +EAA AIK +NGML+N+K+V+VG + +++
Sbjct: 170 AAFGNILSCKVAQDESGASKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVFVGHHIPKKD 229
Query: 197 RAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFGFVN 253
R + + FTN+YV N+ T+E+ +++F FG +TSA + +D++ GKSR FGFVN
Sbjct: 230 RQSKFEEMKANFTNIYVKNIPVEATEEEFRELFEKFGDVTSASLARDAETGKSRGFGFVN 289
Query: 254 FQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLY 313
F + + AA AV++LNG + YVGRAQK+ ERE +LR +E RI + K +G NLY
Sbjct: 290 FINHEHAATAVDELNGKDFKGQDLYVGRAQKKHEREEELRRSYEAARIEKASKYQGVNLY 349
Query: 314 LKNLDDSINDEKLKELFSEFGTITSCKVMVD----------------------------- 344
+KNLDD I+DEKL+ELF FG+ITS KVM D
Sbjct: 350 VKNLDDDIDDEKLRELFQSFGSITSAKVMRDTPAETAEAEEKKEKDEEKNKENKDTKETK 409
Query: 345 --------------------QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
G SKG GF F+ P+EAT+A+++MN +M+ KPLYVA+
Sbjct: 410 ETKKEGEAETEEASAPKAKRSLGKSKGFGFVCFNNPDEATKAVSDMNQRMVNNKPLYVAL 469
Query: 385 AQRKEERKARLQAQFA---QIR---------------------APGGMSP--LASG---- 414
AQRK+ RK++L+A QIR PG P L G
Sbjct: 470 AQRKDVRKSQLEASIQARNQIRMQQAAAQAGMPQQYMQAPMFFPPGAQQPGFLPQGGRGM 529
Query: 415 ---------IPGYHHGAP-----RLGPQQLYYGQGTPG--LMPPQAAGYGFQQQVFPGLR 458
IPG G P PQQ G+G P MPP G G PG
Sbjct: 530 QFPPQAGMPIPGAQGGRPGQFQAGFPPQQA--GRGAPAGQQMPPNMYGMG------PGQF 581
Query: 459 PGGPNYIMPYHLQ--RQVHPGQRTGVRRSGNTH---------------QMQQPQFMRNSN 501
P G Y + Q + Q T R N Q PQF + +
Sbjct: 582 PAGGQYPQQNNPQFLAAMQAAQLTAGRGGPNARGPMQGMPPNMAMPMGQQGMPQFQQGAR 641
Query: 502 QGIRYLDNARNGTDQSVVSMVP------VPFEVSGMPATPVETPRPVPVPISTLTSALAS 555
QG A+ G P +P ++ GM P + + VP + L + + +
Sbjct: 642 QGGMPGRGAQAGRPGQFAGGFPPQAGRGMPQQIPGMQQIP-QMAQEGGVPATMLQAQVQA 700
Query: 556 ASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMA 615
+P + ++LGE L+P ++ ++P A K+TGMLLEM+ E+++LIE +L+ KV EA+
Sbjct: 701 VAPQQQKQILGEALFPKIQVLQPELAGKITGMLLEMENQELINLIEDDASLRAKVDEALT 760
Query: 616 VLQE 619
V E
Sbjct: 761 VYDE 764
>gi|301790633|ref|XP_002930398.1| PREDICTED: polyadenylate-binding protein 4-like [Ailuropoda
melanoleuca]
Length = 644
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/387 (58%), Positives = 281/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+ VCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + KV +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 164/288 (56%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 538 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 595
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 596 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 640
>gi|149023878|gb|EDL80375.1| rCG31475, isoform CRA_a [Rattus norvegicus]
Length = 660
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/387 (57%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE+L+++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE L+ELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK + K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 554 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 611
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 612 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGTVA 656
>gi|149023879|gb|EDL80376.1| rCG31475, isoform CRA_b [Rattus norvegicus]
Length = 656
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/387 (57%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE+L+++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE L+ELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK + K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLK 284
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 70/100 (70%), Gaps = 7/100 (7%)
Query: 535 PVETPRPV-----PVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 554 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 611
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEK 629
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K
Sbjct: 612 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQK 651
>gi|195123564|ref|XP_002006275.1| GI18654 [Drosophila mojavensis]
gi|193911343|gb|EDW10210.1| GI18654 [Drosophila mojavensis]
Length = 645
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/435 (53%), Positives = 295/435 (67%), Gaps = 12/435 (2%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL Q++NE+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I KPIRIM+S RDPS+R+SG GNVFIKNLD +IDNKA+ DTF+AFG +LSCKVA
Sbjct: 63 MNFDLIRDKPIRIMWSQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D G SKGYGFV FE EEAA +I +NGML+N K+VYVG F+ R+ER ++ + F
Sbjct: 123 TDEKGTSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV N E DE LK+ F +G ITS VM DGKS+ FGFV +++ +AA AAV+
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAYETTEAAEAAVQA 242
Query: 267 LNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LNG D K YV RAQK+AER+ +L+ KFE+ + R+E + G NLY+KNLDDSI+DE+
Sbjct: 243 LNGKDMGDGKTLYVARAQKKAERQQELKRKFEELKKKRHESVFGVNLYVKNLDDSIDDER 302
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L++ FS +GTITS KVM D+ G SKG GF F P EAT A+ E+NG++IG KPLYVA+A
Sbjct: 303 LRKEFSLYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTELNGRVIGSKPLYVALA 362
Query: 386 QRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGA---PRLGPQQLYYGQ--GTPGLM 440
QRKEERKA L +Q+ + M L P G P + P Q ++G TP
Sbjct: 363 QRKEERKAHLASQYMRHMTGMRMQQLGQLFPPNTAGGFFVPTMTPSQRFFGPQITTPMRS 422
Query: 441 PPQAAGYGFQQQVFP 455
P+ A QQQ+ P
Sbjct: 423 TPRWA----QQQMRP 433
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 68/114 (59%), Gaps = 12/114 (10%)
Query: 505 RYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRM 564
+Y N RN Q + P+P ++ G + + S LA+A P ++ ++
Sbjct: 535 KYTSNMRNPPVQQMQQAQPLPSQLQGKNQEKL------------IASLLANAKPQEQKQI 582
Query: 565 LGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
LGE+LYP++E + A K+TGMLLE++ +E+LH++E EALK KV EA+AVLQ
Sbjct: 583 LGERLYPMIERMHATLAGKITGMLLEIENSELLHMLEDQEALKAKVEEAVAVLQ 636
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITS---CKVMVDQHGFSKGSGFAAFSMPEEATRA 366
A+LY+ +L IN+ L E FS G + S C+ +V + S G + F P +A RA
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSSAGPVLSIRVCRDVVTRR--SLGYAYVNFQQPADAERA 59
Query: 367 LNEMNGKMIGRKPLYVAVAQR 387
L+ MN +I KP+ + +QR
Sbjct: 60 LDTMNFDLIRDKPIRIMWSQR 80
>gi|13096978|gb|AAH03283.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 660
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/387 (57%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF + GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V D +LK++F FG S VM+DS GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
>gi|198386356|ref|NP_001094008.1| polyadenylate-binding protein 4 [Rattus norvegicus]
gi|183985833|gb|AAI66452.1| Pabpc4 protein [Rattus norvegicus]
Length = 644
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/387 (57%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE+L+++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE L+ELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK + K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLK 284
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 538 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 595
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 596 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGTVA 640
>gi|348588301|ref|XP_003479905.1| PREDICTED: polyadenylate-binding protein 1-like [Cavia porcellus]
Length = 599
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 271/606 (44%), Positives = 366/606 (60%), Gaps = 57/606 (9%)
Query: 64 SKRSSLGYAYVNYSNPQDAAN-AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKN 122
S+R SLG +N+ N AA A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKN
Sbjct: 9 SRRPSLGGIILNFENFLLAAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKN 68
Query: 123 LDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIN 182
LD SIDNKAL DTF+AFG +LSCKV D NG SKGYGFV FE +EAA+ AI+ +NGML+N
Sbjct: 69 LDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLN 127
Query: 183 DKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMK 240
D++V+VG F R+ER + + +FTNVY+ N E + DE LK +FG FG S VM
Sbjct: 128 DRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMT 187
Query: 241 DSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQER 300
D GKS+ FGFV+F+ + A AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ +
Sbjct: 188 DESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 247
Query: 301 ISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMP 360
R + +G NLY+KNLDD I+DE+L++ FS FGTITS KVM++ G SKG GF FS P
Sbjct: 248 QDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSP 306
Query: 361 EEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ----IRA------------ 404
EEAT+A+ EMNG+++ KPLYVA+AQRKEER+A L Q+ Q +RA
Sbjct: 307 EEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPA 366
Query: 405 -PGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGP 462
P G + IP + A P Q+ + +P A + FQ PG +RP P
Sbjct: 367 PPSGY--FMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAP 422
Query: 463 NYIMPYHLQRQVH---PGQRTGVRRSGNTHQMQQPQ----------FMRNSNQGIRYLDN 509
P+ R P + R + + Q P+ +R Q +Y
Sbjct: 423 RP--PFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAG 479
Query: 510 ARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQL 569
RN Q + + V + PA V+ P+ S LASA P ++ +MLGE+L
Sbjct: 480 VRN-PQQHLNAQPQVTMQ---QPAVHVQGQEPL------TASMLASAPPQEQKQMLGERL 529
Query: 570 YPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSD 625
+PL++ + P A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+
Sbjct: 530 FPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKA 589
Query: 626 VNEKLG 631
VN G
Sbjct: 590 VNSATG 595
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 110/205 (53%), Gaps = 25/205 (12%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + +++++ +L DLF + +SV+V D+S +S G+ +V++ +DA A +
Sbjct: 154 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 212
Query: 88 ALNFMPINGKPIRIMYSHR-----------------DPSIRKSGYGNVFIKNLDTSIDNK 130
+N +NGK I + + + D R G N+++KNLD ID++
Sbjct: 213 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDE 271
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L F+ FGT+ S KV ++ G+SKG+GFV F + E A A+ +NG ++ K +YV L
Sbjct: 272 RLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 330
Query: 191 FVRRQERAQQNVSPKFTNVYVNNLA 215
R++ER TN Y+ +A
Sbjct: 331 AQRKEERQAH-----LTNQYMQRMA 350
>gi|34419622|ref|NP_570951.2| polyadenylate-binding protein 4 isoform 1 [Mus musculus]
gi|33991671|gb|AAH56432.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
gi|148698437|gb|EDL30384.1| mCG5546, isoform CRA_c [Mus musculus]
Length = 660
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/387 (57%), Positives = 281/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF + GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V D +LK++F FG S VM+DS GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL+ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRREFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
>gi|380793569|gb|AFE68660.1| polyadenylate-binding protein 4 isoform 3, partial [Macaca mulatta]
Length = 485
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/387 (58%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLK 284
>gi|328871935|gb|EGG20305.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 567
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 257/607 (42%), Positives = 356/607 (58%), Gaps = 58/607 (9%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+ + + SLYVGDL Q+V +SQL+++F+QV V ++R+CRD + R SL YAYVNY NP DA
Sbjct: 3 ASFSSSSLYVGDLHQDVTDSQLFEIFNQVGPVANLRICRDTTTRRSLNYAYVNYHNPADA 62
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + LN + GK RIM+S RDPS+RKSG GN+FIKNLD S+D+KAL DTF+AFG +
Sbjct: 63 ERALDTLNNTLVKGKACRIMWSQRDPSLRKSGVGNIFIKNLDKSVDHKALFDTFSAFGNI 122
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNV 202
LSCKV D SKG+GFV +E++++A AI +NGM+IND++V+VG F +ER Q
Sbjct: 123 LSCKVVTDETNVSKGFGFVHYESQDSADKAIMKVNGMIINDQKVFVGPFKSSKERGQTQ- 181
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
K+TNVYV NL+E V +E+L+ + +G IT+ +M D KS+ FGF NF++PD A
Sbjct: 182 ELKYTNVYVKNLSEDVNEEELRDLLVPYGKITNLTIMSDEKSKSKGFGFANFETPDEAKN 241
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
VE NG + KV YVGRAQK+ EREA+L+ KFE K +G NLY+KN+DDSI+
Sbjct: 242 CVEAENGKLFHGKVIYVGRAQKKMEREAELKHKFET-------KYQGVNLYIKNIDDSID 294
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGF-SKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+KL+ F+ +GTITS KVM D SKG GF ++ P+EA++A+ EM+G+M+G KPLY
Sbjct: 295 SDKLRSTFAAYGTITSAKVMRDDKSTSSKGFGFVCYTTPDEASKAVAEMHGRMVGNKPLY 354
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMP 441
VA AQRKE R+ L+AQ + + + P +P + G P ++Y QG P + P
Sbjct: 355 VAFAQRKEIRRQHLEAQHNKFKG-NRIQP----VPSMYAGGP------MFYNQGMPVVYP 403
Query: 442 PQAAGYGFQQQVFPGLRPG-------GPNYIMP--YHLQRQVHPGQRTGVRRSGNTHQMQ 492
Q+ P RPG G Y M Y ++ Q PG R Q
Sbjct: 404 ----------QMMPRPRPGWNQPVPQGQGYPMQPNYPIRNQRGPGGAPNHPRGPGGAPNQ 453
Query: 493 QPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSA 552
+P+ + NQ + N + P P A P E P+ +T
Sbjct: 454 RPRGPMDPNQQVPQAANPQP---------TPAPATAQEAVAVPSEQPQ--------ITLE 496
Query: 553 LASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLE-MDQTEVLHLIESPEALKTKV 610
A P + + LGE LYPL+ +P A K+TGMLL+ + E+ L + + L K+
Sbjct: 497 YVEALPREQQNPFLGELLYPLIHASQPDAAGKITGMLLDSLTVQELFELAQRADKLGEKI 556
Query: 611 AEAMAVL 617
EA+ VL
Sbjct: 557 KEALEVL 563
>gi|260944998|ref|XP_002616797.1| hypothetical protein CLUG_04038 [Clavispora lusitaniae ATCC 42720]
gi|238850446|gb|EEQ39910.1| hypothetical protein CLUG_04038 [Clavispora lusitaniae ATCC 42720]
Length = 620
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 264/638 (41%), Positives = 366/638 (57%), Gaps = 61/638 (9%)
Query: 6 AAAATAAVTSATTAAVPS--------GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSV 57
AAA AA + +T A+ + + SLYVG+L +VNE+ LY++FS + QV S+
Sbjct: 21 AAAPDAAPSESTPASSETEDSQGESVAVTSASLYVGELNPSVNEAVLYEIFSPLGQVSSI 80
Query: 58 RVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGN 117
RVCRD + SLGYAYVNY +D A E LN+ I+G+P RIM+S RDPS+R++G GN
Sbjct: 81 RVCRDAVTKKSLGYAYVNYHKHEDGERALEQLNYSLIDGRPCRIMWSQRDPSLRRNGDGN 140
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLN 177
+FIKNL IDNKAL DTF+AFG +LSCKVA D +G+SK +GFV +E EAA AI+ +N
Sbjct: 141 IFIKNLHPDIDNKALHDTFSAFGRILSCKVATDEHGRSKCFGFVHYETAEAADAAIENVN 200
Query: 178 GMLINDKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
GM +ND++V+VG + +++R + + FTNV+V N T+ +L +F +G ITS
Sbjct: 201 GMSLNDREVFVGKHISKKDRVAKFEEMKANFTNVFVKNFGSDFTEAELAAMFEPYGKITS 260
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
KDS+GKS+ FGF+NF++ DAA AVE+LN N + YVGRAQK+ ER +L+ +
Sbjct: 261 LYFEKDSEGKSKGFGFINFENHDAAVKAVEELNDKEVNGQKIYVGRAQKKRERIEELKKQ 320
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+E R+ + K +G NL++KNLDDS+ E L+E F FGTITS KVMVD+ G SKG GF
Sbjct: 321 YETTRLEKLSKYQGVNLFVKNLDDSLTSEMLEEEFKPFGTITSAKVMVDETGKSKGFGFV 380
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGI 415
FS PEEAT+A+ EMN +M+ KPLYVA+AQRK+ R+++L+ Q + A+GI
Sbjct: 381 CFSAPEEATKAITEMNQRMVLGKPLYVALAQRKDVRRSQLEQQIQARNQMRMQNAAAAGI 440
Query: 416 PGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVH 475
PG + P ++YGQ PG P G G FPG P
Sbjct: 441 PGQF-----MPP--MFYGQ-QPGFFP----GNGRNNGPFPGPNP---------------- 472
Query: 476 PGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATP 535
QM P+ QG ++ NG V M PV + +G
Sbjct: 473 --------------QMMMPRGQMPPPQG-QWPRAGPNGQPVPVYGMPPVYNDFNGPNGRQ 517
Query: 536 ----VETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENI----EPVHASKVTGM 587
R L + +ASA PD + R+LGE+LYP + + EP A K+TGM
Sbjct: 518 QRGYFPNNRNQKGGRRDLAAIIASAPPDQQKRILGEELYPKIVSTGKAQEPEAAGKITGM 577
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSD 625
+L++D E+L L+E E +A+ +E S+
Sbjct: 578 MLDLDNQEILALLEDDELFNNHFEDALTAYEEYKKSSE 615
>gi|354485887|ref|XP_003505113.1| PREDICTED: polyadenylate-binding protein 4-like [Cricetulus
griseus]
Length = 685
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/382 (58%), Positives = 280/382 (73%), Gaps = 10/382 (2%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 30 YPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 89
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 90 ALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 149
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 150 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 208
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E V D++LK++F FG S VM+D GKS+ FGFV+++ + A
Sbjct: 209 AKEFTNVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANK 268
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDD 319
AVE++NG + K +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+KNLDD
Sbjct: 269 AVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYIKNLDD 325
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++G KP
Sbjct: 326 TIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKP 384
Query: 380 LYVAVAQRKEERKARLQAQFAQ 401
LYVA+AQRKEERKA L Q+ Q
Sbjct: 385 LYVALAQRKEERKAHLTNQYMQ 406
>gi|432102762|gb|ELK30241.1| Polyadenylate-binding protein 1-like protein [Myotis davidii]
Length = 603
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 259/591 (43%), Positives = 355/591 (60%), Gaps = 54/591 (9%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
G+ SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 7 GFPLASLYVGDLHPDVTEAMLYEKFSLAGPILSIRVCRDVATRRSLGYAYINFQQPADAE 66
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A + +NF I G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +L
Sbjct: 67 LALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEESIDNKALYDTFSTFGNIL 126
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER-AQQNV 202
SCKV D +G S+G+GFV FE EAAQ AI +NGML+N+++V+V F RQER A+ V
Sbjct: 127 SCKVVCDDHG-SRGFGFVHFETREAAQQAISTMNGMLLNNRKVFVSHFKSRQEREAELGV 185
Query: 203 -SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
+ +FTNVYV NL + ++ L+++F FG S VM+D G SR FGFVNF+ + A
Sbjct: 186 RAMEFTNVYVKNLQMDIDEQGLEELFSQFGKTLSVKVMRDDSGHSRGFGFVNFEKHEEAQ 245
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKL---KGANLYLKNLD 318
AV +NG ++ YVGRAQK AER+ +L+ KF+Q + + ++L +G NLY+KNLD
Sbjct: 246 KAVMDMNGKEVRGQLLYVGRAQKWAERQNELKRKFQQMKQMKQDRLNHYQGVNLYVKNLD 305
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
DSI++E+L++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG ++G K
Sbjct: 306 DSIDNERLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGCILGTK 364
Query: 379 PLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPG 438
PLYVA+AQRK+ERKA L QF Q R S + + G P LG
Sbjct: 365 PLYVALAQRKDERKAILTNQFMQQR--------LSNV--WALGGPHLG------------ 402
Query: 439 LMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMR 498
FQQ V +Y +P Q + + V + + P+ +
Sbjct: 403 ---------SFQQPV---------SYFLPTVPQVRACLQPDSQVEQEESFKANIVPRLLL 444
Query: 499 NSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASP 558
G + + R + S + M P PA + P+ V S LA+A
Sbjct: 445 PETAGGFHPVSKRADENPS-LRMCPRHHVQVQEPAVCIPGQEPLTV------SMLAAAPL 497
Query: 559 DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTK 609
+ +M+GE+LYPL+ N+ A K+TGMLLE+D +E+L ++ESPE+L K
Sbjct: 498 HKQKQMIGERLYPLIYNVHTQLAGKITGMLLEIDNSELLFMLESPESLNAK 548
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 110/315 (34%), Positives = 168/315 (53%), Gaps = 34/315 (10%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRV-CRDQSKRSSLGYAYVNYSNPQD 81
SG GN+ ++ +LE++++ LYD FS ++S +V C D R G+ +V++ +
Sbjct: 96 SGVGNI--FIKNLEESIDNKALYDTFSTFGNILSCKVVCDDHGSR---GFGFVHFETREA 150
Query: 82 AANAKEALNFMPINGKPIRIMYSH--------RDPSIRKSGYGNVFIKNLDTSIDNKALC 133
A A +N M +N + ++ SH + +R + NV++KNL ID + L
Sbjct: 151 AQQAISTMNGMLLNNR--KVFVSHFKSRQEREAELGVRAMEFTNVYVKNLQMDIDEQGLE 208
Query: 134 DTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVR 193
+ F+ FG LS KV D +G S+G+GFV FE E AQ A+ +NG + + +YVG +
Sbjct: 209 ELFSQFGKTLSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVMDMNGKEVRGQLLYVGRAQK 268
Query: 194 RQERAQQNVSPKF----------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAI 237
ER Q + KF N+YV NL +++ +E L+K F +G ITSA
Sbjct: 269 WAER-QNELKRKFQQMKQMKQDRLNHYQGVNLYVKNLDDSIDNERLRKEFSPYGVITSAK 327
Query: 238 VMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
VM + G S+ FGFV F SP+ A AV ++NG K YV AQ++ ER+A L +F
Sbjct: 328 VMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGCILGTKPLYVALAQRKDERKAILTNQFM 386
Query: 298 QERISRYEKLKGANL 312
Q+R+S L G +L
Sbjct: 387 QQRLSNVWALGGPHL 401
>gi|149023880|gb|EDL80377.1| rCG31475, isoform CRA_c [Rattus norvegicus]
Length = 630
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/387 (57%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE+L+++F FG S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 242 EDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 298
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 358 VGSKPLYVALAQRKEERKAHLTNQYMQ 384
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE L+ELFS+FG S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK + K ++V AQ+K ER+A L+ +F Q++
Sbjct: 237 SYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLK 284
>gi|449440159|ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
gi|449521207|ref|XP_004167621.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
Length = 640
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 288/657 (43%), Positives = 389/657 (59%), Gaps = 49/657 (7%)
Query: 11 AAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLG 70
AAV+ T A P+ SLYVGDL +V + QL+D FS + SVR+CRD S SL
Sbjct: 2 AAVSQPTAHASPA-----SLYVGDLHPDVTDGQLFDAFSGFKSLASVRICRDSSTGRSLS 56
Query: 71 YAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNK 130
Y YVN+ +PQDA NA E +N +NG+ IR+M+S RD RKSG GNVF+KNL SI++
Sbjct: 57 YGYVNFISPQDATNAIEVMNHSMLNGRAIRVMWSRRDADARKSGIGNVFVKNLSDSINSL 116
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L + F FG VLS KVA +G+SKGYGFVQFE+EE+A AI+ LNG + DKQ+YVG
Sbjct: 117 GLQELFKKFGNVLSSKVATSDDGKSKGYGFVQFESEESANAAIESLNGFTVGDKQIYVGK 176
Query: 191 FVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFG 250
FVR+ +R N K+TN+YV NL + +E L++ F FG I+S I+ +D +G SR FG
Sbjct: 177 FVRKSDRVLANPDIKYTNLYVKNLDPEIGEEHLQEKFSEFGKISSMIISRDENGVSRGFG 236
Query: 251 FVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGA 310
F+NF++ D A A+E LNG+ KV Y+ RAQK+ ERE LR +E++ + K KG+
Sbjct: 237 FINFENSDDAKRALETLNGSQLGSKVIYIARAQKKTEREEVLRRHYEEKCKEQVLKYKGS 296
Query: 311 NLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEM 370
N+Y+KN+DD + DE+L+E FS+FGTITS K+M D G +KG GF FS P+EA RA+N +
Sbjct: 297 NVYVKNIDDDVTDEELRERFSQFGTITSSKLMRDDKGINKGFGFVCFSNPDEAKRAVNTL 356
Query: 371 NGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQL 430
G M KPLY+A+AQRKE+R+ +L+ QFAQ A GIPG
Sbjct: 357 QGCMFHGKPLYLAIAQRKEDRQMQLKLQFAQRLA---------GIPG--PSTTIFPGGYP 405
Query: 431 YYGQGTPGLMPPQAAGYGFQQQVFPGLRPGG-PN-YIMPYH--LQRQVHPGQRTGVRR-S 485
Y PG++PP A+ G Q G+RPG PN Y P Q P T R+
Sbjct: 406 PYYYPAPGVVPPVASRPGLMFQPL-GMRPGWRPNTYTSPARPGFQPSPLPIIPTASRQPR 464
Query: 486 GNTHQMQQPQF-MRNSNQGIRYLDNARNGTDQSVV-----SMVPVPFEVSGMP-ATPVET 538
N +M P +N Q + Y+ N+++ +QSVV S +V +P A ET
Sbjct: 465 QNRGKMNGPILSHQNGVQSVSYMQNSQDA-NQSVVTAKSSSNQQWTGQVKYVPNARSCET 523
Query: 539 PRP---------------VPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASK 583
+ V L+S LAS+ PD + ++LGE LYPLV+ +P A+K
Sbjct: 524 NKTSGASAAAAAFNSVGDVSQGSQILSSMLASSPPDQQKQILGEHLYPLVQKRKPDLAAK 583
Query: 584 VTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKL----GSLAVN 636
+TGMLLEMD +E+L L+ESPE+L KV EA+ VL+ + + + L LAVN
Sbjct: 584 ITGMLLEMDNSELLLLLESPESLAAKVEEAVQVLKISKTKLSNQDTLSFLPAELAVN 640
>gi|326933139|ref|XP_003212666.1| PREDICTED: polyadenylate-binding protein 4-like [Meleagris
gallopavo]
Length = 636
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 267/590 (45%), Positives = 361/590 (61%), Gaps = 64/590 (10%)
Query: 82 AANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGT 141
A A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AFG
Sbjct: 71 AERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGN 130
Query: 142 VLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ- 200
+LSCKV D NG SKGY FV FE ++AA AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 131 ILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 189
Query: 201 -NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDA 259
+ +FTNVY+ N + + DE LK++F +G S VM D GKS+ FGFV+F+ +
Sbjct: 190 GAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEKHED 249
Query: 260 AAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ---ERISRYEKLKGANLYLKN 316
A AVE++NG N K+ +VGRAQK+ ER+A+L+ +FEQ ERISRY+ G NLY+KN
Sbjct: 250 ANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQ---GVNLYIKN 306
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
LDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++G
Sbjct: 307 LDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 365
Query: 377 RKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPL-----------ASGIPGYHHGA-PR 424
KPLYVA+AQRKEERKA L Q+ Q A GM L A+G GY A P+
Sbjct: 366 SKPLYVALAQRKEERKAHLTNQYMQRIA--GMRALPANTIINQFQPAAG--GYFMPAVPQ 421
Query: 425 LGPQQLYYGQGTPGLMPPQAAG-YGFQQQVFPG----LRPGGPNYIMPYHLQRQVHP--- 476
+ YY M P G + Q F G LR GP + + P
Sbjct: 422 AQSRPTYYAPNQMAQMRPNPRWQQGGRPQGFQGMPSALRQSGPRPALRHLAPAGTAPVSR 481
Query: 477 -----GQRTGVRRSGNT--HQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVS 529
QR GV +G + + +Y + R+ P P
Sbjct: 482 GLPVSAQRAGVTTAGQNLAPRPPVAAPAPRAVPPYKYASSVRS----------PHP---- 527
Query: 530 GMPATPVETPRPV-----PVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKV 584
P P++ P+P P++ S LA+A P ++ +MLGE+L+PL++ + P A K+
Sbjct: 528 --PVQPLQAPQPAVHVQGQEPLT--ASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKI 583
Query: 585 TGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G +A
Sbjct: 584 TGMLLEIDNSELLHMLESPESLRSKVEEAVAVLQAHQAKKEAAQKVGVVA 633
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 170/296 (57%), Gaps = 27/296 (9%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GNV ++ +L+++++ LYD FS ++S +V D++ S GYA+V++ QDA
Sbjct: 102 SGVGNV--FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYAFVHFET-QDA 156
Query: 83 AN-AKEALNFMPINGKPIRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDT 135
A+ A E +N M +N + + + R+ + + + NV+IKN +D++ L +
Sbjct: 157 ADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKEL 216
Query: 136 FAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ 195
F+ +G LS KV D G+SKG+GFV FE E A A++ +NG IN K V+VG ++
Sbjct: 217 FSKYGKTLSVKVMTDPTGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKV 276
Query: 196 ERAQQNVSPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
ER Q + +F N+Y+ NL +T+ DE L+K F FG+ITSA VM +
Sbjct: 277 ER-QAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE- 334
Query: 243 DGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
DG+S+ FGFV F SP+ A AV ++NG K YV AQ++ ER+A L ++ Q
Sbjct: 335 DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQ 390
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 110/204 (53%), Gaps = 23/204 (11%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + ++++ +L +LFS+ + +SV+V D + +S G+ +V++ +DA A E
Sbjct: 197 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSK-GFGFVSFEKHEDANKAVE 255
Query: 88 ALNFMPINGKPI----------------RIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
+N INGK + R + I + N++IKNLD +ID++
Sbjct: 256 EMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEK 315
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L F+ FG++ S KV ++ +G+SKG+GFV F + E A A+ +NG ++ K +YV L
Sbjct: 316 LRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 374
Query: 192 VRRQERAQQNVSPKFTNVYVNNLA 215
R++ER TN Y+ +A
Sbjct: 375 QRKEERKAH-----LTNQYMQRIA 393
>gi|354484923|ref|XP_003504635.1| PREDICTED: polyadenylate-binding protein 1-like [Cricetulus
griseus]
Length = 672
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 270/617 (43%), Positives = 374/617 (60%), Gaps = 59/617 (9%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V E+ LY++FS + ++S+RVCRD + R SLGYAY+N+ P DA A +
Sbjct: 75 SLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 134
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I G+PIRIM+SHRDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG++LS KV
Sbjct: 135 MNFEMIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKVV 194
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
+ +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F RQ+R + + F
Sbjct: 195 YNEHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALGF 253
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV NL + ++ L+ +F FG + S VM+DS+G+SR FGFVNF+ + A AV+
Sbjct: 254 TNVYVKNLHMDMDEQGLQDLFSQFGKMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDH 313
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
+NG ++ YVGRAQKRAER+++L+ +FEQ + R + +G NLY+KNLDDSINDE+L
Sbjct: 314 MNGKEVRGQLLYVGRAQKRAERQSELKRRFEQVKQERQNRYQGVNLYVKNLDDSINDERL 373
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
KE+FS +G ITS KVM + SKG GF FS PEEAT+A+ EMNG+++G KPLYVA+AQ
Sbjct: 374 KEVFSAYGVITSAKVMTES-SHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 432
Query: 387 RKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAG 446
RKEERKA L Q+ + + +S + Q +YYG G+ M P
Sbjct: 433 RKEERKAILTNQYRRQLSRPVLSSFQQPTNYLLSAVSQSTAQAVYYGSGSMAPMQPDPRW 492
Query: 447 YGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRY 506
++P GP+ P P V+ G MQ P+ +
Sbjct: 493 ---------AVQPHGPSSTCP--------PAASV-VQPLGT---MQHPRV---------H 522
Query: 507 LDNARNGTDQ--SVVSMVPVPFEVSG-------MPATPVETPRP---------------- 541
L+NA + Q +V + + +G +P P+ T R
Sbjct: 523 LNNASQASSQVPHTQRVVNIGTQTTGSGGEGCSIPGQPLLTHRGSSAVHSAHGVQEPAVY 582
Query: 542 VPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIE 601
VP S LA+A ++ +M+GE+LY L+++ K+TGMLLEMD E+L L+E
Sbjct: 583 VPGHQPLTVSMLAAAPLHEQKQMIGERLYSLIQDTCAPLTGKITGMLLEMDNLELLLLLE 642
Query: 602 SPEALKTKVAEAMAVLQ 618
SPE+L K+ EA+AVL+
Sbjct: 643 SPESLHAKIEEAVAVLR 659
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 173/309 (55%), Gaps = 16/309 (5%)
Query: 96 GKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQ 154
G P + DP + ++++ +L + L + F+ GT+LS +V D + +
Sbjct: 54 GDPFLGALNTMDPGGQACALSSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRR 113
Query: 155 SKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNL 214
S GY ++ F+ A+ A+ +N +I + + + ++ R +++ N+++ NL
Sbjct: 114 SLGYAYINFQQPADAERALDTMNFEMIKGQPIRI-MWSHRDPGLRKS---GMGNIFIKNL 169
Query: 215 AETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNND 274
++ ++ L F FG+I S+ V+ + G SR FGFV+F++ +AA A+ +NG ND
Sbjct: 170 ENSIDNKALYDTFSTFGSILSSKVVYNEHG-SRGFGFVHFETHEAAQKAINTMNGMLLND 228
Query: 275 KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFG 334
+ +VG + R +REA+L A+ L N+Y+KNL ++++ L++LFS+FG
Sbjct: 229 RKVFVGHFKSRQKREAELGAR----------ALGFTNVYVKNLHMDMDEQGLQDLFSQFG 278
Query: 335 TITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKAR 394
+ S KVM D +G S+G GF F EEA +A++ MNGK + + LYV AQ++ ER++
Sbjct: 279 KMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVRGQLLYVGRAQKRAERQSE 338
Query: 395 LQAQFAQIR 403
L+ +F Q++
Sbjct: 339 LKRRFEQVK 347
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 114/211 (54%), Gaps = 25/211 (11%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
G+ NV YV +L +++E L DLFSQ ++ SV+V RD S S G+ +VN+ ++A
Sbjct: 252 GFTNV--YVKNLHMDMDEQGLQDLFSQFGKMQSVKVMRD-SNGQSRGFGFVNFEKHEEAQ 308
Query: 84 NAKEALNFMPINGKPIRI----MYSHRDPSI----------RKSGYG--NVFIKNLDTSI 127
A + +N + G+ + + + R + R++ Y N+++KNLD SI
Sbjct: 309 KAVDHMNGKEVRGQLLYVGRAQKRAERQSELKRRFEQVKQERQNRYQGVNLYVKNLDDSI 368
Query: 128 DNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVY 187
+++ L + F+A+G + S KV +S+ SKG+GFV F + E A A+ +NG ++ K +Y
Sbjct: 369 NDERLKEVFSAYGVITSAKVMTESS-HSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLY 427
Query: 188 VGLFVRRQERAQQNVSPKFTNVYVNNLAETV 218
V L R++ER TN Y L+ V
Sbjct: 428 VALAQRKEER-----KAILTNQYRRQLSRPV 453
>gi|312378306|gb|EFR24923.1| hypothetical protein AND_10202 [Anopheles darlingi]
Length = 645
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/380 (56%), Positives = 284/380 (74%), Gaps = 5/380 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YQMASLYVGDLHADITEATLFEKFSSAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD IDNKA+ DTF+AFG +LS
Sbjct: 68 ALDTMNFDTIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKKIDNKAMYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKVA D GQSKGYGFV FE EE+A +I+ +NGML+N+K+V+VG F+ R+ER ++
Sbjct: 128 CKVAQDEKGQSKGYGFVHFETEESANTSIEKVNGMLLNEKKVFVGRFISRKEREKELGEK 187
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ FTNVYV N E +T+E L ++F +G+ITS VM DGKSR FGFV F++PDAA
Sbjct: 188 AKLFTNVYVKNFGEDLTEEALHEMFEKYGSITSHRVMM-KDGKSRGFGFVAFENPDAAER 246
Query: 263 AVEKLNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV++LN +D KV YVGRAQK+ ER+ +L+ +FEQ ++ R + G NLY+KNLDD+I
Sbjct: 247 AVQELNAKELSDGKVLYVGRAQKKNERQMELKRRFEQLKMERLTRYHGVNLYVKNLDDTI 306
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DE+L++ F+ +GTITS KVM+D+ G SKG GF FS P+EAT+A+ EMNG+++G KPLY
Sbjct: 307 DDERLRKEFAPYGTITSAKVMLDE-GRSKGFGFVCFSAPDEATKAVTEMNGRIVGSKPLY 365
Query: 382 VAVAQRKEERKARLQAQFAQ 401
VA+AQRKEERK+ L +Q+ Q
Sbjct: 366 VALAQRKEERKSHLASQYIQ 385
>gi|47933430|gb|AAT39343.1| polyadenylate binding protein [Oikopleura dioica]
Length = 610
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 268/647 (41%), Positives = 373/647 (57%), Gaps = 104/647 (16%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL ++ E+ LYD F V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I GKPIRIM+S RDPS+R+SG GNVFIKNLD SIDNKAL DTF++FG +LSCKV
Sbjct: 63 MNFDVIKGKPIRIMWSQRDPSLRRSGQGNVFIKNLDRSIDNKALYDTFSSFGNILSCKVV 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D NG SKG+GFV +E++E+AQ AI+ +NGML+ DK+V+V F R +R ++ + + F
Sbjct: 123 CDING-SKGFGFVHYESDESAQRAIEKVNGMLMEDKKVFVARFKSRNDRMREFGDAAKHF 181
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITS-AIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
TN++V NL ++ + L K F FG + S ++ ++ G S+C GF++F+ D A AAVE
Sbjct: 182 TNLFVKNLPDSWDTDALLKNFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVE 241
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDDSIN 322
++ K Y GRAQK+AER ++L+AK+E QERI RY+ G NLY+KNLDDSI+
Sbjct: 242 IMHEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERIQRYQ---GVNLYVKNLDDSID 298
Query: 323 DEKLKELFSEFGTITSCKVMVD-------------------------------------- 344
DE L+E F +FG ITS KV+ D
Sbjct: 299 DEGLREAFKQFGNITSAKVITDLNEKDEVGQAKSDQAPEEEGEAVEEKKTEDSEAAGDAP 358
Query: 345 -------QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQA 397
+ G SKG GF FS PEEAT+A+ EMNG++ G KPLYV +AQRKE+RKA LQ
Sbjct: 359 GPEKPVSKKGRSKGFGFVCFSSPEEATKAVTEMNGRIFGGKPLYVGLAQRKEDRKAHLQQ 418
Query: 398 QFAQIRAPGGM---SPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVF 454
Q+ Q R G+ + + + + + PR L QG P M PQ
Sbjct: 419 QYMQ-RVSTGIRMQAFMGNQVVNQNFQPPRY---ILPTMQGQPVQMFPQGT--------- 465
Query: 455 PGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGT 514
P +R P + P ++ V+ ++ +Q I +AR
Sbjct: 466 PMVR-ATPRWAPPNQVRHIVY----------------------QSHSQQILASPDAR--- 499
Query: 515 DQSVVSMVPVPFEVSGMPATPVETPRPV--PVPISTLTSALASASPDDRTRMLGEQLYPL 572
V V +P EV MP +P P + +S LA+A+P ++ +MLGE+L+PL
Sbjct: 500 ----VRNVQIPSEVIQMPPQMPHQNQPAGDQAPETLTSSMLANANPQEQKQMLGERLFPL 555
Query: 573 VENIEPVH-ASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
++++ A K+TGMLLE+D +E+LH++++ E LK+KV EA+ VL+
Sbjct: 556 IQSMAATDLAGKITGMLLEIDNSELLHMLDNRELLKSKVDEAVLVLK 602
>gi|148698436|gb|EDL30383.1| mCG5546, isoform CRA_b [Mus musculus]
Length = 580
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/401 (57%), Positives = 287/401 (71%), Gaps = 11/401 (2%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 20 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 79
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF + GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 80 ADAERALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 139
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 140 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 198
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V D +LK++F FG S VM+DS GKS+ FGFV+++
Sbjct: 199 ELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKH 258
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 259 EDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 315
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL+ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 316 KNLDDTIDDEKLRREFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRI 374
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGI 415
+G KPLYVA+AQRKEERKA L Q+ Q R G + AS I
Sbjct: 375 VGSKPLYVALAQRKEERKAHLTNQYMQ-RVAGMRALPASAI 414
>gi|392595814|gb|EIW85137.1| polyadenylate binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 683
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/432 (51%), Positives = 295/432 (68%), Gaps = 25/432 (5%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ V E+ ++++F+ + V S+RVCRD R SLGYAYVNY N D A
Sbjct: 44 SASLYVGELDPTVTEAMIFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTADGERAL 103
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I G+P RIM+S RDP++RK+G GN+FIKNLD IDNKAL DTF AFG VLSCK
Sbjct: 104 EQLNYSLIKGRPCRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFVAFGNVLSCK 163
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSP 204
VA D G+SKGYGFV +E EAA+ AIK +NGML+NDK+VYVG + R+ER + +
Sbjct: 164 VATDEQGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGPHIPRKERQSKLDEMKA 223
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
+FTN+Y+ NL VT E+ +++F +G++TSAIV D +G+S+ FGFVN++S + A AAV
Sbjct: 224 QFTNLYIKNLDTEVTQEEFEELFNRYGSVTSAIVQVDDEGRSKGFGFVNYESHEEAQAAV 283
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
+ L+ T K YV RAQK+AERE +LR +EQ ++ + K +G NLY+KNL+D ++D+
Sbjct: 284 DNLHDTDLKGKKLYVTRAQKKAEREEELRRSYEQAKMEKLSKYQGVNLYVKNLEDDVDDD 343
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KL+ F FGTITSCKVM D+ G SKG GF FS P+EAT+A+ EMN KMIG KPLYV++
Sbjct: 344 KLRAEFEPFGTITSCKVMSDEKGSSKGFGFVCFSSPDEATKAIAEMNNKMIGSKPLYVSL 403
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSPLASGIPG-YHHGAPRLGPQQLYY----------- 432
AQR+E R+ +L++Q AQ A+GIPG Y +GA LYY
Sbjct: 404 AQRREVRRQQLESQIAQRNQIRMQQAAAAGIPGAYLNGA-------LYYPPGPGGFPPQG 456
Query: 433 ----GQGTPGLM 440
G G PG++
Sbjct: 457 RNMMGYGQPGML 468
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 544 VPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESP 603
VP+ + T ALA P ++ +MLGE +Y + +P A K+TGMLLEM+ E+LHL+E+P
Sbjct: 597 VPVISAT-ALAGLPPMEQKQMLGEVIYMNIVATQPELAGKITGMLLEMENPELLHLLETP 655
Query: 604 EALKTKVAEAMAVLQE 619
+A+ KV EA+AVL +
Sbjct: 656 DAMAAKVNEALAVLHD 671
>gi|225441084|ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding protein At2g36660 [Vitis
vinifera]
gi|297740018|emb|CBI30200.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 279/624 (44%), Positives = 385/624 (61%), Gaps = 36/624 (5%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL ++ + L+D FS+ + SVR+CRD S SL Y YVN+ +PQDA++A EA
Sbjct: 13 SLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISPQDASHAIEA 72
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
N ++GK IR+M+SHRDP R+SG GNVF+KNL SIDN L F FG +LSCKV
Sbjct: 73 KNHTMLHGKVIRVMWSHRDPDARRSGIGNVFVKNLSDSIDNVRLQAMFQKFGNILSCKVV 132
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
+ +G+SKGYGFVQFE+EE A AI+ LNG +I+ KQ+Y G FVR+ +R N K+TN
Sbjct: 133 VTEDGKSKGYGFVQFESEEYANAAIEKLNGFIIDGKQIYAGKFVRKTDRVLPNPDAKYTN 192
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
+Y+ NL VT+E L++ F FG I S ++ KD +G SR FGFVNF+SP+ A A+E LN
Sbjct: 193 LYIKNLDPDVTEEALREKFFEFGKIASLVISKDENGMSRGFGFVNFESPEDAKRALEALN 252
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G KV YV RAQK+AERE LR +FE++R + K +G+N+Y+KN+DD++ND+ L+E
Sbjct: 253 GLQLGSKVLYVARAQKKAEREQLLRRQFEEKRNEQILKYRGSNVYVKNIDDNVNDDDLRE 312
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRK 388
FS G ITS K+M DQ G SKG GF FS P+EA++A+N +G M RKPLYVA+AQRK
Sbjct: 313 HFSVCGKITSAKLMRDQKGISKGFGFVCFSTPDEASKAVNTFHGYMFHRKPLYVAIAQRK 372
Query: 389 EERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYG 448
E+R+A+LQ +AQ R G P IPG G LYY PG++PP+ G
Sbjct: 373 EDRQAQLQLHYAQ-RMAGLAGPSTPVIPG--------GYPPLYY-TAPPGVIPPR-QGLM 421
Query: 449 FQ----------QQVFPGLRPG-GPNYI--MP-YHLQRQVHPGQRTGVRRSGNTHQMQQP 494
+Q + P RP P+ I MP Q + + G+ G G H
Sbjct: 422 YQPLGLRTGWRANNLIPPTRPAFQPSSIPLMPNTPRQHRQNRGRTNGHIPQGGGHST--- 478
Query: 495 QFMRNSNQGIRYLDNARNGTDQSVVSMVP-VP----FEV---SGMPATPVETPRPVPVPI 546
FM + Q + + + ++ +Q VP +E+ SG+P+ +
Sbjct: 479 AFMPHLQQPTQPVISPKDSINQQRAGQAKYVPNGRSYEMSKGSGIPSAASNSVGTGSQGS 538
Query: 547 STLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEAL 606
L+S LA+ASP+ + ++LGE LYPLV+ +P A+K+TGMLLEMD +E+L L+ESPE+L
Sbjct: 539 EMLSSMLAAASPEQQKQILGEHLYPLVQKQKPDLAAKITGMLLEMDNSELLLLLESPESL 598
Query: 607 KTKVAEAMAVLQEAAARSDVNEKL 630
KV EA+ VL+ + ++ + L
Sbjct: 599 AAKVEEAVQVLKLSKSKPSGQDTL 622
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD-QHGFSKGSGFAAFSMPEEATRALN 368
A+LY+ +L I D L + FSEF ++ S ++ D G S G+ F P++A+ A+
Sbjct: 12 ASLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISPQDASHAIE 71
Query: 369 EMNGKMIGRKPLYVAVAQR 387
N M+ K + V + R
Sbjct: 72 AKNHTMLHGKVIRVMWSHR 90
>gi|410987610|ref|XP_004000091.1| PREDICTED: polyadenylate-binding protein 1 [Felis catus]
Length = 672
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 267/596 (44%), Positives = 358/596 (60%), Gaps = 64/596 (10%)
Query: 77 SNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTF 136
S+ QDA A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF
Sbjct: 96 SSRQDAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTF 155
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
+AFG +LSCKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+E
Sbjct: 156 SAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKE 214
Query: 197 RAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNF 254
R + + +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F
Sbjct: 215 REAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSF 274
Query: 255 QSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYL 314
+ + A AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+
Sbjct: 275 ERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYV 334
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 335 KNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRI 393
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPG 417
+ KPLYVA+AQRKEER+A L Q+ Q +RA P G + IP
Sbjct: 394 VATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQ 451
Query: 418 YHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH- 475
+ A P Q+ + +P A + FQ PG +RP P P+ R
Sbjct: 452 TQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASS 507
Query: 476 --PGQRTGVRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVV 519
P + R + + Q P+ +R Q +Y RN Q V
Sbjct: 508 QVPRVMSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQV 566
Query: 520 SMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPV 579
+M PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P
Sbjct: 567 TM--------QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPT 612
Query: 580 HASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 613 LAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 668
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 110/205 (53%), Gaps = 25/205 (12%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + +++++ +L DLF + +SV+V D+S +S G+ +V++ +DA A +
Sbjct: 227 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 285
Query: 88 ALNFMPINGKPIRIMYSHR-----------------DPSIRKSGYGNVFIKNLDTSIDNK 130
+N +NGK I + + + D R G N+++KNLD ID++
Sbjct: 286 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDE 344
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L F+ FGT+ S KV ++ G+SKG+GFV F + E A A+ +NG ++ K +YV L
Sbjct: 345 RLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 403
Query: 191 FVRRQERAQQNVSPKFTNVYVNNLA 215
R++ER TN Y+ +A
Sbjct: 404 AQRKEERQAH-----LTNQYMQRMA 423
>gi|47219550|emb|CAG09904.1| unnamed protein product [Tetraodon nigroviridis]
Length = 623
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/382 (57%), Positives = 280/382 (73%), Gaps = 10/382 (2%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ LY+ FS V+S+RVCRD R SLGYAYVN+S P DA
Sbjct: 8 YPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF + GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGY FV FE ++AA AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N + + DE LK++F +G S VM D GKSR FGF++++ + A
Sbjct: 187 AKEFTNVYIKNFGDDMNDERLKELFDKYGKTLSVKVMTDPTGKSRGFGFISYEKHEDANK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDD 319
AVE +NGT N K +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+KNLDD
Sbjct: 247 AVEDMNGTELNGKTVFVGRAQKKMERQAELKRKFEMLKQERISRYQ---GVNLYIKNLDD 303
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
+I+DEKL++ FS FG+ITS KVM+++ G SKG GF FS PEEAT+A+ EMNG+++G KP
Sbjct: 304 TIDDEKLRKEFSPFGSITSAKVMLEE-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKP 362
Query: 380 LYVAVAQRKEERKARLQAQFAQ 401
LYVA+AQRKEERKA L Q+ Q
Sbjct: 363 LYVALAQRKEERKAHLTNQYMQ 384
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 161/289 (55%), Gaps = 16/289 (5%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIK 174
++++ +L I L + F+ G VLS +V D +S GY +V F A+ A+
Sbjct: 11 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALD 70
Query: 175 MLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTIT 234
+N ++ K + + R + V NV++ NL +++ ++ L F FG I
Sbjct: 71 TMNFDVVKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNIL 126
Query: 235 SAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRA 294
S V+ D +G S+ + FV+F++ DAA A+EK+NG ND+ +VGR + R EREA+L A
Sbjct: 127 SCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGA 185
Query: 295 KFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGF 354
K ++ N+Y+KN D +NDE+LKELF ++G S KVM D G S+G GF
Sbjct: 186 KAKE----------FTNVYIKNFGDDMNDERLKELFDKYGKTLSVKVMTDPTGKSRGFGF 235
Query: 355 AAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ +MNG + K ++V AQ+K ER+A L+ +F ++
Sbjct: 236 ISYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKMERQAELKRKFEMLK 284
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 64/84 (76%)
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
S LA+A P ++ +MLGE+L+PL++ + A K+TGMLLE+D +E+LH++ES E+L++KV
Sbjct: 536 SMLAAAPPQEQKQMLGERLFPLIQAMHANLAGKITGMLLEIDNSELLHMLESHESLRSKV 595
Query: 611 AEAMAVLQEAAARSDVNEKLGSLA 634
EA+AVLQ A+ D +K G+LA
Sbjct: 596 EEAVAVLQAHQAKKDATQKAGNLA 619
>gi|319411853|emb|CBQ73896.1| probable PAB1-mRNA polyadenylate-binding protein [Sporisorium
reilianum SRZ2]
Length = 650
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 262/601 (43%), Positives = 362/601 (60%), Gaps = 24/601 (3%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVG+L+ +V E+ L+++F+ + V S+RVCRD R SLGYAYVN+ N D A E
Sbjct: 47 TSLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNFLNAADGERAME 106
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LN+ I +P RIM+S RDP++R++G GN+FIKNLD IDNKAL DTFAAFG +LSCKV
Sbjct: 107 QLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKV 166
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSPK 205
A + G S GYGFV +E EAA+ AIK +NGML+NDK+VYVG + R+ER +
Sbjct: 167 ATNDTG-SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEESRAN 225
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
FTNVY N+ VTDE+ +K+F +G ITS ++ +D DGKS+ FGFVNF+ + A AV+
Sbjct: 226 FTNVYAKNVDPDVTDEEFEKLFTRYGKITSCVLQRDDDGKSKGFGFVNFEDHNEAQTAVD 285
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
+L+ + + +V RAQK++ERE +LR +E + + K +G NLYLKN+ +S +DE+
Sbjct: 286 ELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDER 345
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L+E F+ FG ITSCK+M G S+G GF +S+PEEA +A++EMNGKM+ +PLYVA+A
Sbjct: 346 LREEFAPFGAITSCKIMRAPSGVSRGFGFVCYSVPEEANKAVSEMNGKMLDNRPLYVALA 405
Query: 386 QRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAA 445
QRK++R+ +L+AQ Q A+ GY GP +YY Q PG P Q
Sbjct: 406 QRKDDRRQQLEAQIMQRNQLRLQQQAAAQGMGYP------GP-GMYYPQ--PGAFPGQPG 456
Query: 446 GYGFQQQVFP-GLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGI 504
G + + P G+ P G + PY Q G R + +
Sbjct: 457 GMMPRPRYAPAGMMPQG-MPMAPYGQPGQFPAGMMPQGYRPARPPRGAPNAAGGPAPPAG 515
Query: 505 RYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVP------VPISTLTSALASASP 558
NG + PVP + MP P P P P + +ALA ASP
Sbjct: 516 ARPPAGVNGAPRPAGQ--PVPGQP--MPRGPAARPAGRPQGEAAGQPGALTAAALAKASP 571
Query: 559 DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
+++ +MLGE +YP V +P A K+TGM+LE+ TE+LHL++ EAL KV EA+ VL+
Sbjct: 572 EEQKQMLGEAIYPKVAASQPELAGKLTGMILELPVTELLHLLDESEALDAKVNEALEVLK 631
Query: 619 E 619
E
Sbjct: 632 E 632
>gi|357120111|ref|XP_003561773.1| PREDICTED: polyadenylate-binding protein-like [Brachypodium
distachyon]
Length = 714
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 256/614 (41%), Positives = 356/614 (57%), Gaps = 37/614 (6%)
Query: 17 TTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNY 76
T A VP+ LYVGDL ++ E L+D FS+V V SVRVCRD + SSL Y YVNY
Sbjct: 97 TNATVPA------LYVGDLHEDAQEEHLFDAFSKVGAVTSVRVCRDTATSSSLRYGYVNY 150
Query: 77 SNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTF 136
+ DA A E +N I KPIR+M+S+RDP R+SG GNVF+KNL+ IDN L + F
Sbjct: 151 FSQADAMTALEKMNHSLILDKPIRVMWSNRDPDARRSGVGNVFVKNLNDHIDNVILQELF 210
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
+ FG +LSCKVA + +G S+GYGFVQF +E+A AI+ LN +Q++V F+++ E
Sbjct: 211 SKFGDILSCKVARNDDGTSRGYGFVQFAAQESADIAIENLNNSHFEGRQLHVAHFIKKSE 270
Query: 197 RAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQS 256
R+ N K+TN+Y+ NL + +T+E +K F FG + S +MK DG S+ FGFV+F+S
Sbjct: 271 RSANN-DDKYTNLYMKNLDDDMTEELIKLKFSQFGPLISVKIMKRDDGTSKGFGFVSFKS 329
Query: 257 PDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
PD+A A E +NG K YV RAQK+AER+ L+ E++R K G+N+Y+KN
Sbjct: 330 PDSAKKAKEAMNGIPLGSKSLYVARAQKKAERKQYLQLLHEEKRNEILTKSNGSNVYIKN 389
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
+ D ++DE L+E F EFG ITS K+M D G SKG GF ++ P+EA A++ M G M
Sbjct: 390 ISDRVDDETLRERFDEFGNITSVKIMRDDKGISKGFGFVCYNTPDEAKCAVSSMRGVMFY 449
Query: 377 RKPLYVAVAQRKEERKARLQAQFAQIRA-PGGMSP-LASGIPGYHHGAPRLG-PQQLYYG 433
KPLYVA+AQRKE+RKARL+ +FA++ G SP + +G P + P PQ G
Sbjct: 450 DKPLYVAIAQRKEDRKARLEQRFAELATMVGAASPVIPTGYPHVYFAHPSTHFPQ----G 505
Query: 434 QGTPGLM-PPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQ 492
G M PP G ++Q VFP P+++Q Q+H R ++ +
Sbjct: 506 PSRQGFMYPPMGLGQEWRQNVFPS----------PHNIQ-QIHAPLMPNTPRQYRNNRGR 554
Query: 493 QPQFMRNSNQGIRYLDNARNGTDQSVVS--------MVPVPFEVSGMPATPVETPRPVPV 544
M + Y+ +A+ D +S +P SG+ + PV
Sbjct: 555 MTGNMMTFPHTVNYVSHAQTAKDFMSMSRQQFGHAKYIPADVMTSGL---AIHHSDPVSS 611
Query: 545 PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPE 604
TS LA+A PD + MLG +LYPLVE P ASK+TGMLL++D ++V+ LI SP+
Sbjct: 612 VNDPFTSLLAAAPPDQQRNMLGNRLYPLVERYHPELASKITGMLLDLDSSDVVLLICSPD 671
Query: 605 ALKTKVAEAMAVLQ 618
L K+ E +LQ
Sbjct: 672 MLSAKINECAQLLQ 685
>gi|403305068|ref|XP_003943097.1| PREDICTED: polyadenylate-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 803
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 269/613 (43%), Positives = 362/613 (59%), Gaps = 74/613 (12%)
Query: 60 CRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVF 119
CRD+ +R L +A A + +NF I GKP+RIM+S RDPS+RKSG GN+F
Sbjct: 220 CRDEPQRPQLPHA----------ERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIF 269
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGM 179
IKNLD SIDNKAL DTF+AFG +LSCKV D NG SKGYGFV FE +EAA+ AI+ +NGM
Sbjct: 270 IKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGM 328
Query: 180 LINDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAI 237
L+ND++V+VG F R+ER + + +FTNVY+ N E + DE LK +FG FG S
Sbjct: 329 LLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 388
Query: 238 VMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
VM D GKS+ FGFV+F+ + A AV+++NG N K YVGRAQK+ ER+ +L+ KFE
Sbjct: 389 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFE 448
Query: 298 QERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAF 357
Q + R + +G NLY+KNLDD I+DE+L++ FS FGTITS KVM++ G SKG GF F
Sbjct: 449 QMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCF 507
Query: 358 SMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ----IRA--------- 404
S PEEAT+A+ EMNG+++ KPLYVA+AQRKEER+A L Q+ Q +RA
Sbjct: 508 SSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPY 567
Query: 405 ----PGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRP 459
P G + IP + A P Q+ + +P A + FQ PG +RP
Sbjct: 568 QPAPPSGY--FMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRP 623
Query: 460 GGPNYIMPYHLQRQVH---PGQRTGVRRSGNTHQMQQPQ----------FMRNSNQGIRY 506
P P+ R P + R + + Q P+ +R Q +Y
Sbjct: 624 AAPR--PPFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKY 680
Query: 507 LDNARNGTD----QSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRT 562
RN Q V+M PA V+ P+ S LASA P ++
Sbjct: 681 AAGVRNPQQHLNAQPQVTM--------QQPAVHVQGQEPL------TASMLASAPPQEQK 726
Query: 563 RMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ---- 618
+MLGE+L+PL++ + P A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ
Sbjct: 727 QMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQA 786
Query: 619 EAAARSDVNEKLG 631
+ AA+ VN G
Sbjct: 787 KEAAQKAVNSATG 799
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 110/205 (53%), Gaps = 25/205 (12%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + +++++ +L DLF + +SV+V D+S +S G+ +V++ +DA A +
Sbjct: 358 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 416
Query: 88 ALNFMPINGKPIRIMYSHR-----------------DPSIRKSGYGNVFIKNLDTSIDNK 130
+N +NGK I + + + D R G N+++KNLD ID++
Sbjct: 417 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDE 475
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L F+ FGT+ S KV ++ G+SKG+GFV F + E A A+ +NG ++ K +YV L
Sbjct: 476 RLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 534
Query: 191 FVRRQERAQQNVSPKFTNVYVNNLA 215
R++ER TN Y+ +A
Sbjct: 535 AQRKEERQAH-----LTNQYMQRMA 554
>gi|344236474|gb|EGV92577.1| Polyadenylate-binding protein 4 [Cricetulus griseus]
Length = 524
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/378 (58%), Positives = 279/378 (73%), Gaps = 10/378 (2%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AFG +LSCKV
Sbjct: 63 MNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVV 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER + + +F
Sbjct: 123 CDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEF 181
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVY+ N E V D++LK++F FG S VM+D GKS+ FGFV+++ + A AVE+
Sbjct: 182 TNVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEE 241
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDDSIND 323
+NG + K +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+KNLDD+I+D
Sbjct: 242 MNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYIKNLDDTIDD 298
Query: 324 EKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVA 383
EKL++ FS FG+ITS KVM+ + G SKG GF FS PEEAT+A+ EMNG+++G KPLYVA
Sbjct: 299 EKLRKEFSPFGSITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVA 357
Query: 384 VAQRKEERKARLQAQFAQ 401
+AQRKEERKA L Q+ Q
Sbjct: 358 LAQRKEERKAHLTNQYMQ 375
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 3 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 62
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 63 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 118
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 119 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 177
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++D+ LKELFS+FG S KVM D G SKG GF
Sbjct: 178 AKEF----------TNVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPSGKSKGFGFV 227
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK + K ++V AQ+K ER+A L+ +F Q++
Sbjct: 228 SYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLK 275
>gi|355784464|gb|EHH65315.1| Polyadenylate-binding protein 1-like protein [Macaca fascicularis]
Length = 635
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 263/628 (41%), Positives = 372/628 (59%), Gaps = 43/628 (6%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKR-----SSLGYAYVNYS 77
SGY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+
Sbjct: 6 SGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRFLPTRRSLGYAYINFQ 65
Query: 78 NPQD-------AANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNK 130
P D A A + +NF + G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNK
Sbjct: 66 QPADGEEQAQRAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNK 125
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
AL DTF+ FG +LSCKV D +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG
Sbjct: 126 ALYDTFSTFGNILSCKVVCDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH 184
Query: 191 FVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRC 248
F R+ER + + +FTN+YV NL V ++ L+ +F FG + S VM+D+ G SRC
Sbjct: 185 FKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRC 244
Query: 249 FGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLK 308
FGFVNF+ + A AV +NG + ++ Y GRAQKR ER+ +L+ +FEQ + R + +
Sbjct: 245 FGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQ 304
Query: 309 GANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGF-------SKGSGFAAFS-MP 360
G NLY+KNLDDSI+D+KL++ FS +G ITS K + + F S AA S +
Sbjct: 305 GVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKGVGAGYPFWGSADPVGTCSPSAALSGLK 364
Query: 361 EEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPG--- 417
EEAT+A+ EMNG+++G KPLYVA+AQRKEERKA L Q+ Q + M L++ + G
Sbjct: 365 EEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYMQRLS--TMRTLSNPLLGSFQ 422
Query: 418 -----YHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQR 472
+ P+ Q YYG G + P Q A Q P +MP
Sbjct: 423 QPSSYFLPAVPQPPAQAAYYGCGP--VTPTQPAPRWTSQPPRPSCASMVRPPVMPRRPPA 480
Query: 473 QVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMP 532
+ + VR++ P R +N G + G ++P +
Sbjct: 481 HI-----SSVRQASTQVPRMVPHTQRVANIGTQTTGPGGVGCCTPGRPLLPYKCSSAAHS 535
Query: 533 ATPVETPRPVPVP-ISTLTSALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLE 590
V+ P V +P LT+++ +A+P ++ +M+GE+LYPL+ ++ A K+TGMLLE
Sbjct: 536 TYRVQEP-AVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLE 594
Query: 591 MDQTEVLHLIESPEALKTKVAEAMAVLQ 618
+D +E+L ++ESPE+L K+ EA+AVLQ
Sbjct: 595 IDNSELLLMLESPESLHAKIDEAVAVLQ 622
>gi|195429537|ref|XP_002062815.1| GK19652 [Drosophila willistoni]
gi|194158900|gb|EDW73801.1| GK19652 [Drosophila willistoni]
Length = 638
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/383 (57%), Positives = 277/383 (72%), Gaps = 5/383 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL Q++NE+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I KPIRIM+S RDPS+R+SG GNVFIKNLD IDNKA+ DTF+AFG +LSCKVA
Sbjct: 63 MNFDLIRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRQIDNKAIYDTFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
+D G SKGYGFV FE EEAA +I+ +NGML+N K+VYVG F+ R+ER ++ + F
Sbjct: 123 LDEKGNSKGYGFVHFETEEAANTSIEKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV N E DE LK F +G ITS VM DGKS+ FGFV F++ +AA AAV+
Sbjct: 183 TNVYVKNFTEEFDDEKLKDFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQA 242
Query: 267 LNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LNG + K YV RAQK+AER+ +L+ KFE+ + R+E + G NLY+KNLDDSI+DE+
Sbjct: 243 LNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKKKRHESVFGVNLYVKNLDDSIDDER 302
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L++ FS +GTITS KVM D+ G SKG GF F P EAT A+ E+NG+++G KPLYVA+A
Sbjct: 303 LRKEFSLYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTELNGRVVGSKPLYVALA 362
Query: 386 QRKEERKARLQAQFAQIRAPGGM 408
QRKEERKA L +Q+ +R GM
Sbjct: 363 QRKEERKAHLASQY--MRHMTGM 383
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 55/74 (74%)
Query: 545 PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPE 604
P + S LA+A P ++ ++LGE+LYPL+E + A K+TGMLLE++ +E+LH++E E
Sbjct: 556 PEKLIASLLANAKPQEQKQILGERLYPLIERMHATLAGKITGMLLEIENSELLHMLEDQE 615
Query: 605 ALKTKVAEAMAVLQ 618
ALK KV EA+AVLQ
Sbjct: 616 ALKAKVEEAVAVLQ 629
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITS---CKVMVDQHGFSKGSGFAAFSMPEEATRA 366
A+LY+ +L IN+ L E FS G + S C+ +V + S G + F P +A RA
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSSAGPVLSIRVCRDVVTRR--SLGYAYVNFQQPADAERA 59
Query: 367 LNEMNGKMIGRKPLYVAVAQR 387
L+ MN +I KP+ + +QR
Sbjct: 60 LDTMNFDLIRNKPIRIMWSQR 80
>gi|409045875|gb|EKM55355.1| hypothetical protein PHACADRAFT_255926 [Phanerochaete carnosa
HHB-10118-sp]
Length = 672
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/435 (50%), Positives = 293/435 (67%), Gaps = 25/435 (5%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ V+E+ L+++F+ + V S+RVCRD R SLGYAYVNY N D A
Sbjct: 48 SASLYVGELDPTVSEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 107
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I G+ RIM+S RDP++RK+G GN+FIKNLD +IDNKAL DTFAAFG VLSCK
Sbjct: 108 EQLNYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDEAIDNKALHDTFAAFGNVLSCK 167
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSP 204
VA D G+SKGYGFV +E EAA+ AIK +NGML+NDK+VYVG + ++ER + +
Sbjct: 168 VATDEQGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISKKERQSKLDEIRA 227
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
+FTN+YV NL V+ E+ ++F FG +TSA++ D +G S+ FGFVNF+ + A AV
Sbjct: 228 QFTNIYVKNLDPEVSLEEFTQLFEQFGNVTSAVIQTDEEGNSKGFGFVNFEFHEEAQNAV 287
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
+ L+ T N + +V RAQK+AERE +LR +E ++ + K +G NLY+KNLDD I+DE
Sbjct: 288 DGLHDTEYNGRKLFVSRAQKKAEREEELRKSYEHAKMEKMSKYQGVNLYIKNLDDEIDDE 347
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
+L+ F FGTITS KVM D+ G SKG GF FS P+EAT+A+ EMN KMIG KPLYV++
Sbjct: 348 RLRAEFEPFGTITSAKVMRDEKGSSKGFGFVCFSSPDEATKAVAEMNNKMIGAKPLYVSL 407
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYY------------ 432
AQR+E R+ +L++Q AQ A+G+PGY +G +YY
Sbjct: 408 AQRREVRRQQLESQIAQRNQIRMQQAAAAGMPGYMNGP-------MYYPAGPGGFPPQGG 460
Query: 433 ----GQGTPGLMPPQ 443
G G PG+MPP+
Sbjct: 461 RGMMGYGQPGMMPPR 475
>gi|195381687|ref|XP_002049579.1| GJ21671 [Drosophila virilis]
gi|194144376|gb|EDW60772.1| GJ21671 [Drosophila virilis]
Length = 645
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/413 (54%), Positives = 286/413 (69%), Gaps = 10/413 (2%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL Q++NE+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I KPIRIM+S RDPS+R+SG GNVFIKNLD +IDNKA+ DTF+AFG +LSCKVA
Sbjct: 63 MNFDLIRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D G SKGYGFV FE EEAA +I +NGML+N K+VYVG F+ R+ER ++ + F
Sbjct: 123 TDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV N E DE LK+ F +G ITS VM DGKS+ FGFV +++ +AA AAV+
Sbjct: 183 TNVYVKNFTEEFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAYETTEAAEAAVQA 242
Query: 267 LNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LNG + K YV RAQK+AER+ +L+ KFE+ + R+E + G NLY+KNLDDSI+DE+
Sbjct: 243 LNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKKKRHESVFGVNLYVKNLDDSIDDER 302
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L++ FS +GTITS KVM D G SKG GF F P EAT A+ E+NG+++G KPLYVA+A
Sbjct: 303 LRKEFSLYGTITSAKVMTDDEGRSKGFGFVCFISPNEATCAVTELNGRVVGSKPLYVALA 362
Query: 386 QRKEERKARLQAQFAQIRAPGGMSPLASG---IPGYHHG--APRLGPQQLYYG 433
QRKEERKA L +Q+ +R GM G P G P + P Q ++G
Sbjct: 363 QRKEERKAHLASQY--MRHMTGMRMQQLGQLFQPNTASGFFVPTMAPSQRFFG 413
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 53/70 (75%)
Query: 549 LTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
+ S LA+A P + ++LGE+LYP++E + A K+TGMLLE++ +E+LH++E EALK
Sbjct: 567 IASLLANAKPQEAKQILGERLYPMIERMHAALAGKITGMLLEIENSELLHMLEDQEALKA 626
Query: 609 KVAEAMAVLQ 618
KV EA+AVLQ
Sbjct: 627 KVEEAVAVLQ 636
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITS---CKVMVDQHGFSKGSGFAAFSMPEEATRA 366
A+LY+ +L IN+ L E FS G + S C+ +V + S G + F P +A RA
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVVTRR--SLGYAYVNFQQPADAERA 59
Query: 367 LNEMNGKMIGRKPLYVAVAQR 387
L+ MN +I KP+ + +QR
Sbjct: 60 LDTMNFDLIRNKPIRIMWSQR 80
>gi|426236179|ref|XP_004012050.1| PREDICTED: polyadenylate-binding protein 1 [Ovis aries]
Length = 577
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 264/591 (44%), Positives = 354/591 (59%), Gaps = 64/591 (10%)
Query: 82 AANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGT 141
A A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG
Sbjct: 6 AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 65
Query: 142 VLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ- 200
+LSCKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 66 ILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 124
Query: 201 -NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDA 259
+ +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ +
Sbjct: 125 GARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHED 184
Query: 260 AAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDD 319
A AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD
Sbjct: 185 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 244
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KP
Sbjct: 245 GIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 303
Query: 380 LYVAVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGA 422
LYVA+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 304 LYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRA 361
Query: 423 PRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQ 478
P Q+ + +P A + FQ PG +RP P P+ R P
Sbjct: 362 AYYPPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRV 417
Query: 479 RTGVRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVPV 524
+ R + + Q P+ +R Q +Y RN Q V+M
Sbjct: 418 MSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM--- 473
Query: 525 PFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKV 584
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+
Sbjct: 474 -----QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKI 522
Query: 585 TGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 523 TGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 573
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 110/205 (53%), Gaps = 25/205 (12%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + +++++ +L DLF + +SV+V D+S +S G+ +V++ +DA A +
Sbjct: 132 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 190
Query: 88 ALNFMPINGKPIRIMYSHR-----------------DPSIRKSGYGNVFIKNLDTSIDNK 130
+N +NGK I + + + D R G N+++KNLD ID++
Sbjct: 191 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDE 249
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L F+ FGT+ S KV ++ G+SKG+GFV F + E A A+ +NG ++ K +YV L
Sbjct: 250 RLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 308
Query: 191 FVRRQERAQQNVSPKFTNVYVNNLA 215
R++ER TN Y+ +A
Sbjct: 309 AQRKEERQAH-----LTNQYMQRMA 328
>gi|289742137|gb|ADD19816.1| polyA-binding protein [Glossina morsitans morsitans]
Length = 653
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/422 (55%), Positives = 297/422 (70%), Gaps = 14/422 (3%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL Q++NE+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSNAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF + KPIRIM+S RDPS+R+SG GNVFIKNLD +IDNKA+ DTF+AFG +LSCKVA
Sbjct: 63 MNFDLLRNKPIRIMWSQRDPSLRRSGIGNVFIKNLDKTIDNKAIYDTFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK--- 205
D G SKGYGFV FE EEAA NAI+ +NGML+N K+VYVG F+ R+ER ++++ K
Sbjct: 123 TDDKGTSKGYGFVHFETEEAANNAIEKVNGMLLNGKKVYVGKFIPRKER-EKDLGEKAKL 181
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
FTNVYV N + V DE LK++F +G ITS VM DGKS+CFGFV F++ +AA AAVE
Sbjct: 182 FTNVYVKNFGDDVDDEKLKEMFDPYGKITSYKVMIKEDGKSKCFGFVAFETTEAAEAAVE 241
Query: 266 KLNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
LNG D K YV RAQK+AER+ +L+ KFE+ + R E + G NLY+KNLDD+I+DE
Sbjct: 242 ALNGKDMGDGKALYVARAQKKAERQQELKRKFEELKKKRQESVYGVNLYVKNLDDTIDDE 301
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
+L++ FS FGTITS KVM D+ G SKG GF F P EAT A+ EMNG+++G KPLYVA+
Sbjct: 302 RLRKEFSLFGTITSAKVMTDEDGRSKGFGFVCFVAPHEATCAVTEMNGRVVGSKPLYVAL 361
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSPLASG------IPGYHHGAPRLGPQQLYYGQGTPG 438
AQRKE+RKA L +Q+ +R GM G PG + P +GP Q ++G P
Sbjct: 362 AQRKEDRKAHLASQY--MRHMAGMRMQQIGQMFQPNTPG-NFFVPTMGPGQRFFGPQVPT 418
Query: 439 LM 440
M
Sbjct: 419 AM 420
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 61/92 (66%), Gaps = 5/92 (5%)
Query: 532 PATPVETPRPVPV-----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTG 586
P V+ P PV P L S LA+A+P ++ ++LGE+LYP++E P A K+TG
Sbjct: 553 PVQQVQAPPPVKQQHQKGPEKLLASMLANANPQEQKQILGERLYPIIELAHPNMAGKITG 612
Query: 587 MLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
MLLE++ +E+LH+IE EALK KV EA+AVL
Sbjct: 613 MLLEIENSELLHMIEDQEALKAKVEEAVAVLH 644
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEEATRALN 368
A+LY+ +L IN+ L E FS G + S +V D S G + F P +A RAL+
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSNAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 369 EMNGKMIGRKPLYVAVAQR 387
MN ++ KP+ + +QR
Sbjct: 62 TMNFDLLRNKPIRIMWSQR 80
>gi|195024447|ref|XP_001985876.1| GH21052 [Drosophila grimshawi]
gi|193901876|gb|EDW00743.1| GH21052 [Drosophila grimshawi]
Length = 645
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/435 (52%), Positives = 295/435 (67%), Gaps = 13/435 (2%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL Q++NE+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF + KPIRIM+S RDPS+R+SG GNVFIKNLD +IDNKA+ DTF+AFG +LSCKVA
Sbjct: 63 MNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D G SKGYGFV FE EEAA +I +NGML+N K+VYVG F+ R+ER ++ + F
Sbjct: 123 TDEKGHSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVY+ N + DE LK+ F +G ITS VM DGKS+ FGFV +++ +AA AAV+
Sbjct: 183 TNVYIKNFTDEFDDEKLKENFEPYGKITSYKVMSKDDGKSKGFGFVAYETTEAAEAAVQA 242
Query: 267 LNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LNG + K YV RAQK+AER+ +L+ KFE+ + R+E + G NLY+KNLDDSI+DE+
Sbjct: 243 LNGKDMGEGKTLYVARAQKKAERQQELKRKFEELKKKRHESVFGVNLYVKNLDDSIDDER 302
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L++ FS +GTITS KVM D+ G SKG GF F P EAT A+ E+NG+++G KPLYVA+A
Sbjct: 303 LRKEFSLYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTELNGRVVGSKPLYVALA 362
Query: 386 QRKEERKARLQAQFAQIRAPGGMSPLASG---IPGYHHG--APRLGPQQLYYGQGTPGLM 440
QRKEERKA L +Q+ +R GM G P G P + P Q ++G P +
Sbjct: 363 QRKEERKAHLASQY--MRHMTGMRMQQLGQLFQPNAASGFFVPTMAPSQRFFG---PQMT 417
Query: 441 PPQAAGYGFQQQVFP 455
P + QQ+ P
Sbjct: 418 PQMRNTPRWAQQIRP 432
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 54/70 (77%)
Query: 549 LTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
+ S LA+A P ++ ++LGE+LYP++E + A K+TGMLLE++ +E+LH++E EALK
Sbjct: 567 IASLLANAKPQEQKQILGERLYPMIERMHAALAGKITGMLLEIENSELLHMLEDQEALKA 626
Query: 609 KVAEAMAVLQ 618
KV EA+AVLQ
Sbjct: 627 KVEEAVAVLQ 636
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITS---CKVMVDQHGFSKGSGFAAFSMPEEATRA 366
A+LY+ +L IN+ L E FS G + S C+ +V + S G + F P +A RA
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVVTRR--SLGYAYVNFQQPADAERA 59
Query: 367 LNEMNGKMIGRKPLYVAVAQR 387
L+ MN ++ KP+ + +QR
Sbjct: 60 LDTMNFDLVRNKPIRIMWSQR 80
>gi|440913295|gb|ELR62762.1| Polyadenylate-binding protein 1, partial [Bos grunniens mutus]
Length = 572
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 263/587 (44%), Positives = 355/587 (60%), Gaps = 56/587 (9%)
Query: 82 AANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGT 141
A A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG
Sbjct: 1 AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 60
Query: 142 VLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ- 200
+LSCKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 61 ILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 119
Query: 201 -NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDA 259
+ +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ +
Sbjct: 120 GARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHED 179
Query: 260 AAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDD 319
A AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD
Sbjct: 180 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 239
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KP
Sbjct: 240 GIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 298
Query: 380 LYVAVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGA 422
LYVA+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 299 LYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRA 356
Query: 423 PRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQ 478
P Q+ + +P A + FQ PG +RP P P+ R P
Sbjct: 357 AYYPPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRV 412
Query: 479 RTGVRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEV 528
+ R + + Q P+ +R Q +Y RN Q + + V +
Sbjct: 413 MSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRN-PQQHLNAQPQVTMQ- 469
Query: 529 SGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGML 588
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGML
Sbjct: 470 --QPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGML 521
Query: 589 LEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
LE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 522 LEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 568
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 110/205 (53%), Gaps = 25/205 (12%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + +++++ +L DLF + +SV+V D+S +S G+ +V++ +DA A +
Sbjct: 127 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 185
Query: 88 ALNFMPINGKPIRIMYSHR-----------------DPSIRKSGYGNVFIKNLDTSIDNK 130
+N +NGK I + + + D R G N+++KNLD ID++
Sbjct: 186 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDE 244
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L F+ FGT+ S KV ++ G+SKG+GFV F + E A A+ +NG ++ K +YV L
Sbjct: 245 RLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 303
Query: 191 FVRRQERAQQNVSPKFTNVYVNNLA 215
R++ER TN Y+ +A
Sbjct: 304 AQRKEERQAH-----LTNQYMQRMA 323
>gi|448115215|ref|XP_004202770.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
gi|359383638|emb|CCE79554.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
Length = 626
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 259/634 (40%), Positives = 365/634 (57%), Gaps = 61/634 (9%)
Query: 1 MEATGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVC 60
++ T ++ +A + +P + SLYVG+L +VNE+ L+++FS V QV S+RVC
Sbjct: 25 IQETNVSSGNEGEDAADSTQLPDT--SASLYVGELNPSVNEASLFEIFSPVGQVSSIRVC 82
Query: 61 RDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFI 120
RD + SLGYAYVN+ +D A + LN+ I+G+P RIM+S RDPS+R++G GN+FI
Sbjct: 83 RDAVTKKSLGYAYVNFHKLEDGEKAIDDLNYSLIDGRPCRIMWSQRDPSLRRNGEGNIFI 142
Query: 121 KNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGML 180
KNL +IDNKAL DTF+AFG +LSCKVA D G SK +GFV +E EAA+ AI+ +NGML
Sbjct: 143 KNLHPAIDNKALHDTFSAFGKILSCKVATDEQGNSKCFGFVHYETAEAARAAIENVNGML 202
Query: 181 INDKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
+ND++VYVG V +++R + + FTNVYV N+ ++E+++ +F +G ITS +
Sbjct: 203 LNDREVYVGKHVSKKDRESKFEEMKANFTNVYVKNIDLGFSEEEMRNLFEPYGKITSLHL 262
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
KD++GKS+ FGFVNF+S +AA AVE+LN N + YVGRAQK+ ER +L+ ++E
Sbjct: 263 EKDAEGKSKGFGFVNFESHEAAVKAVEELNDKDINGQNLYVGRAQKKRERIEELKRQYET 322
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
R+ + K +G NL++KNLDDSI+ KL+E F FGTITS +VMVD+HG SKG GF FS
Sbjct: 323 ARLEKLSKYQGVNLFVKNLDDSIDSVKLEEEFKPFGTITSARVMVDEHGKSKGFGFVCFS 382
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLAS--GIP 416
PEEAT+A+ EMN +M KPLYVA+AQRK+ R+++L+ Q Q R M A+ GIP
Sbjct: 383 SPEEATKAITEMNQRMFHGKPLYVALAQRKDVRRSQLEQQI-QARNQMRMQNAAATGGIP 441
Query: 417 GYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHP 476
G +PP YG Q FP P
Sbjct: 442 GQ--------------------FIPPMF--YGQQPGFFP--------------------P 459
Query: 477 GQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPA--- 533
R G QM P+ QG ++ NG V + PV + +
Sbjct: 460 NGRGSAPFPGPNPQMMVPRGQIPPPQG-QWPRAGPNGQPVPVYGIPPVYGDFAAANGGRQ 518
Query: 534 ----TPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENI----EPVHASKVT 585
P P L + LASA D + R+LGE+LYP + ++ EP A K+T
Sbjct: 519 QRGYYPNRGQNQKGRPQKDLAALLASAPVDQQKRILGEELYPKIVSMGRAQEPEAAGKIT 578
Query: 586 GMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
GM+L++D E+L L+E +A+ +E
Sbjct: 579 GMMLDLDNQEILALLEDDALFNNHFEDALTAYEE 612
>gi|297283068|ref|XP_001113342.2| PREDICTED: polyadenylate-binding protein 4 [Macaca mulatta]
Length = 657
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/387 (57%), Positives = 280/387 (72%), Gaps = 13/387 (3%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E V DE LK++F S VM+D GKS+ FGFV+++
Sbjct: 182 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSK---TLSVKVMRDPSGKSKGFGFVSYEKH 238
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYL 314
+ A AVE++NG + K+ +VGRAQK+ ER+A+L+ KFE QERISRY+ G NLY+
Sbjct: 239 EDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYI 295
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG++
Sbjct: 296 KNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRI 354
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ 401
+G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 355 VGSKPLYVALAQRKEERKAHLTNQYMQ 381
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 163/288 (56%), Gaps = 19/288 (6%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK
Sbjct: 128 CKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DE LKELFS+ S KVM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEEVDDESLKELFSK---TLSVKVMRDPSGKSKGFGFV 233
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 234 SYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLK 281
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 551 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 608
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 609 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 653
>gi|346974495|gb|EGY17947.1| polyadenylate-binding protein [Verticillium dahliae VdLs.17]
Length = 759
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 282/736 (38%), Positives = 380/736 (51%), Gaps = 148/736 (20%)
Query: 1 MEATGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVC 60
+E A TA T +AVP + SLYVG+LE V E+ L++LFS + V S+RVC
Sbjct: 36 VEGAQGDADTAGPTP--NSAVPQPQASASLYVGELEPQVTEAMLFELFSHIGPVASIRVC 93
Query: 61 RDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFI 120
RD R SLGYAYVNY+ D A E LN+ ING+P RIM+S RDP++RK+G GNVFI
Sbjct: 94 RDAVTRRSLGYAYVNYNTTSDGEKALEELNYTVINGRPCRIMWSQRDPALRKNGQGNVFI 153
Query: 121 KNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGML 180
KNLD +IDNKAL DTFAAFG +LSCKVA D +G SKGYGFV +E +EAA AIK +NGML
Sbjct: 154 KNLDVAIDNKALHDTFAAFGNILSCKVAQDEHGNSKGYGFVHYETDEAAAQAIKHVNGML 213
Query: 181 INDKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
+N+K+VYVG + +++R + + FTNVYV N+ +D++ + +F +G +TS+ +
Sbjct: 214 LNEKKVYVGHHIPKKDRQSKFEEMKANFTNVYVKNINSEASDDEFRDLFTKYGEVTSSSL 273
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+D +GKSR FGFVNF + +AA+ AVE+LNG + YVGRAQK+ ERE +LR +E
Sbjct: 274 ARDQEGKSRGFGFVNFTTHEAASQAVEELNGKDFRGQDLYVGRAQKKHEREEELRKSYEA 333
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ------------- 345
R + K +G NLY+KNL D ++DEKL+ +FSEFG ITS KVM D
Sbjct: 334 ARQEKANKYQGVNLYIKNLSDDVDDEKLRAMFSEFGPITSAKVMRDSISEGEDEEKAEEE 393
Query: 346 ----------------------------------HGFSKGSGFAAFSMPEEATRALNEMN 371
G SKG GF FS PE+AT+A+ +MN
Sbjct: 394 TPAPEAEVKKEDSEADADSQEAADKKDAKKGDKKLGKSKGFGFVCFSNPEDATKAVADMN 453
Query: 372 GKMIGRKPLYVAVAQRKEERK------------ARLQAQFAQIRAPGGMSPLASGIPGYH 419
+MI KPLYVA+AQRK+ RK R+Q+ AQ P PG
Sbjct: 454 QRMIDNKPLYVALAQRKDVRKNQLEQSIQARNQMRMQSAAAQAGMPNQFMQQPVYFPGQQ 513
Query: 420 HG-----------APRLGPQQLYYGQGTPGLMP---PQAAGYGFQQQVFPGLRPGGPNYI 465
G P +G + G+ PG P PQ G G QQ+ P +
Sbjct: 514 PGFLPQGGRGMPFPPNMGMPNIQGGR--PGQYPAGFPQQGGRGIPQQLPPNM-------- 563
Query: 466 MPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVP 525
Y + Q PG G Q PQFM ++ + A G + P
Sbjct: 564 --YGVPGQFPPG--------GFPAQANNPQFMA----AMQQVQQASMGGGRGQGGRGP-- 607
Query: 526 FEVSGMPATPVETPRP----------------------------------------VPVP 545
+ GMPA P+ P P
Sbjct: 608 --MQGMPAGPMGPGAPGYPPNRQQPGQAGGRGGRNGQQGNFPPQGGRGAPGAGENTPPQG 665
Query: 546 ISTLTSALASASPDDR--TRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESP 603
+S + L +A+ D R +++GE ++P + +P A K+TGMLLEM+ +E++ LIE
Sbjct: 666 LSAIQLQLNNAT-DARQQKQIIGELIFPKIAAQQPELAGKITGMLLEMENSELITLIEDD 724
Query: 604 EALKTKVAEAMAVLQE 619
A+K KV EA+ V +E
Sbjct: 725 NAMKLKVDEALGVYEE 740
>gi|432107630|gb|ELK32863.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 565
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 262/584 (44%), Positives = 351/584 (60%), Gaps = 64/584 (10%)
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LSCKV
Sbjct: 1 MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVV 60
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER + + +F
Sbjct: 61 CDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEF 119
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A AV++
Sbjct: 120 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 179
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
+NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+DE+L
Sbjct: 180 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 239
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYVA+AQ
Sbjct: 240 RKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 298
Query: 387 RKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRLGPQQ 429
RKEER+A L Q+ Q +RA P G + IP + A P Q
Sbjct: 299 RKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYYPPSQ 356
Query: 430 LYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTGVRRS 485
+ + +P A + FQ PG +RP P P+ R P + R +
Sbjct: 357 IAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMSTQRVA 412
Query: 486 GNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFEVSGM 531
+ Q P+ +R Q +Y RN Q V+M
Sbjct: 413 NTSTQTMGPRPAAAAAAATPAVRTVAQ-YKYAPGVRNPQQHLNAQPQVTM--------QQ 463
Query: 532 PATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEM 591
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGMLLE+
Sbjct: 464 PAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEI 517
Query: 592 DQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 518 DNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 561
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 110/205 (53%), Gaps = 25/205 (12%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + +++++ +L DLF + +SV+V D+S +S G+ +V++ +DA A +
Sbjct: 120 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 178
Query: 88 ALNFMPINGKPIRIMYSHR-----------------DPSIRKSGYGNVFIKNLDTSIDNK 130
+N +NGK I + + + D R G N+++KNLD ID++
Sbjct: 179 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDE 237
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L F+ FGT+ S KV ++ G+SKG+GFV F + E A A+ +NG ++ K +YV L
Sbjct: 238 RLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 296
Query: 191 FVRRQERAQQNVSPKFTNVYVNNLA 215
R++ER TN Y+ +A
Sbjct: 297 AQRKEERQAH-----LTNQYMQRMA 316
>gi|323448247|gb|EGB04148.1| hypothetical protein AURANDRAFT_70409 [Aureococcus anophagefferens]
Length = 616
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 272/650 (41%), Positives = 377/650 (58%), Gaps = 92/650 (14%)
Query: 18 TAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYS 77
+++VP + + SLYVGDL + +E L+++F+ V V S+RVCRD R SLGYAYVN+
Sbjct: 5 SSSVP--FHSASLYVGDLATDASEGLLFEIFNTVGPVASIRVCRDAVTRRSLGYAYVNFH 62
Query: 78 NPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFA 137
N DA A + +N+ I KP RIM+S RDP++RKSG GNVF+KNLD+SID+KAL DTF+
Sbjct: 63 NVSDAERALDTMNYTLIKSKPCRIMWSQRDPTLRKSGVGNVFVKNLDSSIDHKALFDTFS 122
Query: 138 AFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
FG +LSCKVA D G+S+GYG+V +E+E+AA +AI +N M I DK+VYVG FVRR ER
Sbjct: 123 LFGNILSCKVATDEAGRSQGYGYVHYESEDAATDAINKINSMTICDKEVYVGHFVRRTER 182
Query: 198 AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ Q+ +TN+YV N + L+K F F +DG + FG+VNF+
Sbjct: 183 SGQS---DWTNLYVKNFPADWDEATLRKAFEMFAA---------ADGSA--FGWVNFEGH 228
Query: 258 DAAAAAVEKLNGTT-----------NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK 306
DAA AA++ LNG + +VGRAQK+ ERE +L+AKF+ +I R +K
Sbjct: 229 DAAVAAMDALNGASELPGHAGTAPITLKSPLFVGRAQKKVERERELKAKFDAAKIERIKK 288
Query: 307 LKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD-QHGFSKGSGFAAFSMPEEATR 365
+G NL++KNLDD+++D++L+E F+E+GTITS +VM + G S+G GF FS PEEA +
Sbjct: 289 YQGVNLFVKNLDDALDDDQLREHFTEYGTITSARVMREPATGTSRGFGFVCFSSPEEAAK 348
Query: 366 ALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMS-PLASGIPGYHHGAPR 424
A+ EMN K++ KP++VA+AQRKE R+A+L+AQ AQ P +S P + +P
Sbjct: 349 AVTEMNNKLVLGKPIFVALAQRKEVRRAQLEAQHAQRLHPAHLSAPYGAAMP-------- 400
Query: 425 LGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRR 484
+ Y G PG P G Q PG+ G Q Q Q RR
Sbjct: 401 -----IMYAAGAPGGHP-----MGMAPQGHPGVPIAG---------QMQQMSSQGGSNRR 441
Query: 485 SGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPAT---------- 534
S N Q +Y NARN +M +P + MP T
Sbjct: 442 SRNRGGQGG---QGQGAQQYKYTQNARNAASMP-PNMPQLPPQAHLMPPTVGQQPGQGFP 497
Query: 535 ---------------------PVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLV 573
++ R P TL SALA+ASP + M+GE+LYPL+
Sbjct: 498 GGPGVAPPMPPLPLQQPPPPGSSQSQRRAPEDPLTL-SALANASPTLQKNMIGERLYPLI 556
Query: 574 ENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAAR 623
+ +P A K+TGMLLEMD +E+LHL+ESP+AL+ KVAEA+ VL++ A+
Sbjct: 557 HHSQPELAGKITGMLLEMDNSELLHLLESPDALRMKVAEALEVLKQHQAQ 606
>gi|195150897|ref|XP_002016387.1| GL11548 [Drosophila persimilis]
gi|194110234|gb|EDW32277.1| GL11548 [Drosophila persimilis]
Length = 640
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/411 (54%), Positives = 284/411 (69%), Gaps = 6/411 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL Q++NE+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I KPIRIM+S RDPS+R+SG GNVFIKNLD IDNKA+ DTF+AFG +LSCKVA
Sbjct: 63 MNFDLIRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKGIDNKAIYDTFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
ID G SKGYGFV FE EEAA +I +NGML+N K+VYVG F+ R+ER ++ + F
Sbjct: 123 IDEKGNSKGYGFVHFETEEAANTSIDRVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV N E DE LK+ F +G ITS VM DGKS+ FGFV +++ +AA AAV+
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAYETTEAAEAAVQA 242
Query: 267 LNGT-TNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LNG K YV RAQK+AER+ +L+ KFE+ + R++ + G NLY+KNLDD+I+DE+
Sbjct: 243 LNGKDMGESKSLYVARAQKKAERQQELKRKFEELKKKRHDSVFGVNLYVKNLDDTIDDER 302
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L++ FS +GTITS KVM D+ G SKG GF F P EAT A+ E+NG++IG KPLYVA+A
Sbjct: 303 LRKDFSMYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTELNGRVIGSKPLYVALA 362
Query: 386 QRKEERKARLQAQFAQIRAPGGMSPLASGI-PGYHHG--APRLGPQQLYYG 433
QRKEERKA L +Q+ + M L P G P + P Q ++G
Sbjct: 363 QRKEERKAHLASQYMRHMTGMRMQQLGQMFQPNTTGGFFVPTIPPSQRFFG 413
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 55/70 (78%)
Query: 549 LTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
+ S LA+A+P ++ ++LGE+LYP++E + A K+TGMLLE++ +E+LH++E EALK
Sbjct: 562 IASLLANANPQEQKQILGERLYPMIERMHAALAGKITGMLLEIENSELLHMLEDKEALKA 621
Query: 609 KVAEAMAVLQ 618
KV EA+AVLQ
Sbjct: 622 KVEEAVAVLQ 631
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEEATRALN 368
A+LY+ +L IN+ L E FS G + S +V D S G + F P +A RAL+
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 369 EMNGKMIGRKPLYVAVAQR 387
MN +I KP+ + +QR
Sbjct: 62 TMNFDLIRNKPIRIMWSQR 80
>gi|157125851|ref|XP_001654419.1| polyadenylate-binding protein [Aedes aegypti]
gi|157125853|ref|XP_001654420.1| polyadenylate-binding protein [Aedes aegypti]
gi|94468824|gb|ABF18261.1| polyadenylate-binding protein [Aedes aegypti]
gi|108873484|gb|EAT37709.1| AAEL010318-PB [Aedes aegypti]
gi|108873485|gb|EAT37710.1| AAEL010318-PA [Aedes aegypti]
Length = 628
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/376 (57%), Positives = 282/376 (75%), Gaps = 5/376 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLHADITEAILFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD +IDNKA+ DTF+AFG +LSCKVA
Sbjct: 63 MNFDLIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D G SKGYGFV FE EE+A +I+ +NGML+N K+VYVG F+ R+ER ++ + F
Sbjct: 123 QDEKGNSKGYGFVHFETEESANTSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLF 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV N + + DE LK++F +GTITS VM DGKSR FGFV F++P++A AV++
Sbjct: 183 TNVYVKNFGDELNDETLKEMFEKYGTITSHRVM-IKDGKSRGFGFVAFENPESAEHAVQE 241
Query: 267 LNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LNG + K+ YVGRAQK+ ER+ +L+ +FEQ ++ R + +G NLY+KNLDDSI+DE+
Sbjct: 242 LNGKELGEGKILYVGRAQKKNERQMELKRRFEQLKMERLTRYQGVNLYVKNLDDSIDDER 301
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L++ FS FGTITS KVM+++ G SKG GF FS EEAT+A+ EMNG+++G KPLYVA+A
Sbjct: 302 LRKEFSPFGTITSAKVMLEE-GRSKGFGFVCFSAAEEATKAVTEMNGRIVGSKPLYVALA 360
Query: 386 QRKEERKARLQAQFAQ 401
QRKE+RKA L +Q+ Q
Sbjct: 361 QRKEDRKAHLASQYMQ 376
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 69/114 (60%), Gaps = 10/114 (8%)
Query: 505 RYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRM 564
+Y N RN Q+V P+ + A V+ P+ S LA+A P ++ +M
Sbjct: 516 KYTQNMRNPPAQAV----PMAAQPVAQQAVHVKGQEPLT------ASMLAAAQPAEQKQM 565
Query: 565 LGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
LGE+L+PL+E + P A K+TGMLLE+D +E++H++E E+LK KV EA+AVL
Sbjct: 566 LGERLFPLIEPLYPTIAGKITGMLLEIDNSELVHMLEHSESLKAKVDEAVAVLH 619
>gi|338728570|ref|XP_001492678.3| PREDICTED: polyadenylate-binding protein 1 [Equus caballus]
Length = 565
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 262/584 (44%), Positives = 351/584 (60%), Gaps = 64/584 (10%)
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LSCKV
Sbjct: 1 MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVV 60
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER + + +F
Sbjct: 61 CDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEF 119
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A AV++
Sbjct: 120 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 179
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
+NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+DE+L
Sbjct: 180 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 239
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYVA+AQ
Sbjct: 240 RKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 298
Query: 387 RKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRLGPQQ 429
RKEER+A L Q+ Q +RA P G + IP + A P Q
Sbjct: 299 RKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYYPPSQ 356
Query: 430 LYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTGVRRS 485
+ + +P A + FQ PG +RP P P+ R P + R +
Sbjct: 357 IAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMSTQRVA 412
Query: 486 GNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFEVSGM 531
+ Q P+ +R Q +Y RN Q V+M
Sbjct: 413 NTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM--------QQ 463
Query: 532 PATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEM 591
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGMLLE+
Sbjct: 464 PAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEI 517
Query: 592 DQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 518 DNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 561
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 110/205 (53%), Gaps = 25/205 (12%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + +++++ +L DLF + +SV+V D+S +S G+ +V++ +DA A +
Sbjct: 120 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 178
Query: 88 ALNFMPINGKPIRIMYSHR-----------------DPSIRKSGYGNVFIKNLDTSIDNK 130
+N +NGK I + + + D R G N+++KNLD ID++
Sbjct: 179 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDE 237
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L F+ FGT+ S KV ++ G+SKG+GFV F + E A A+ +NG ++ K +YV L
Sbjct: 238 RLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 296
Query: 191 FVRRQERAQQNVSPKFTNVYVNNLA 215
R++ER TN Y+ +A
Sbjct: 297 AQRKEERQAH-----LTNQYMQRMA 316
>gi|330793331|ref|XP_003284738.1| RNA-binding region-containing protein (RNP-1) [Dictyostelium
purpureum]
gi|325085338|gb|EGC38747.1| RNA-binding region-containing protein (RNP-1) [Dictyostelium
purpureum]
Length = 565
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 271/605 (44%), Positives = 356/605 (58%), Gaps = 69/605 (11%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL V+E L+++F+QV V ++RVCRD + R SL YAYVNY N DA A +
Sbjct: 11 SLYVGDLLPEVSEQTLFEVFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNAADAERALDT 70
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LN PI GKP RIM+S RDPS+RKSG GNVFIKNLD ID+KAL DTF+AFG +LSCKV
Sbjct: 71 LNNTPIRGKPCRIMWSQRDPSLRKSGVGNVFIKNLDKGIDHKALYDTFSAFGNILSCKVV 130
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
D N SKG+GFV +E++++A AI +NGM+IN ++V+VG F +ER Q KFTN
Sbjct: 131 TDDNNSSKGFGFVHYESQDSADKAIAKVNGMMINGQKVFVGPFKSSKERGQP-TEIKFTN 189
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITS-AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
V+ NLAE VT + LK++ +GTIT+ AI++ + GKS+ F F NF+S DAA VE
Sbjct: 190 VFFKNLAEDVTSDQLKELLAPYGTITNVAIMLDEKTGKSKGFAFANFESADAAKNVVEIE 249
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG + K Y GRAQK+ EREA+L+ FE K +G NLY+KN+DDSI+++KL+
Sbjct: 250 NGKVFHGKPLYAGRAQKKIEREAELKHTFE-------TKYQGVNLYIKNIDDSIDNDKLR 302
Query: 328 ELFSEFGTITSCKVMVDQHG-FSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
E+FS+FGTITS VM D SKG GF ++ P+EATRA+ EMNG+MIG KPLYVA+AQ
Sbjct: 303 EVFSQFGTITSAVVMKDDKATTSKGFGFVCYTSPDEATRAVTEMNGRMIGTKPLYVALAQ 362
Query: 387 RKEERKARLQAQFAQIRAPG---GMSPLASGIPGYHHGAPRLGPQQLYY--------GQG 435
RK+ R+A+L+ Q Q G M+P SG P + AP + P +Y G
Sbjct: 363 RKDIRRAQLEMQHQQKFKAGMRQTMAPAYSGGPVFFTPAP-VTPAVVYQQMMPRPRNWNG 421
Query: 436 TPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHP-GQR-TGVRRSGNTHQMQQ 493
P +P G + +R GG Q P GQR TG R +G Q
Sbjct: 422 APVGVPGNQYGMNY-------VRGGG-----------QPRPNGQRPTGPRPNGQRPDSAQ 463
Query: 494 PQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSAL 553
P + + DQ+ P SG A+ P TL+S L
Sbjct: 464 P------------IATQQPAVDQATQQ----PQAASG--ASQEAAP--------TLSSIL 497
Query: 554 ASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLE-MDQTEVLHLIESPEALKTKVAE 612
A + D + LGE LYPL+ N +P A K+TGMLL+ + E+ L + + L K+ E
Sbjct: 498 ALPTRDQQNVALGELLYPLIHNSQPELAGKITGMLLDSLPVEELFALTQRSDLLNEKIKE 557
Query: 613 AMAVL 617
A+ VL
Sbjct: 558 AIDVL 562
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 96/189 (50%), Gaps = 10/189 (5%)
Query: 22 PSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQD 81
P+ +++ +L ++V QL +L + + +V + D+ S G+A+ N+ +
Sbjct: 182 PTEIKFTNVFFKNLAEDVTSDQLKELLAPYGTITNVAIMLDEKTGKSKGFAFANFESADA 241
Query: 82 AANAKEALNFMPINGKPIRIMYSH----RDPSIR---KSGYG--NVFIKNLDTSIDNKAL 132
A N E N +GKP+ + R+ ++ ++ Y N++IKN+D SIDN L
Sbjct: 242 AKNVVEIENGKVFHGKPLYAGRAQKKIEREAELKHTFETKYQGVNLYIKNIDDSIDNDKL 301
Query: 133 CDTFAAFGTVLSCKVAIDSNG-QSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
+ F+ FGT+ S V D SKG+GFV + + + A A+ +NG +I K +YV L
Sbjct: 302 REVFSQFGTITSAVVMKDDKATTSKGFGFVCYTSPDEATRAVTEMNGRMIGTKPLYVALA 361
Query: 192 VRRQERAQQ 200
R+ R Q
Sbjct: 362 QRKDIRRAQ 370
>gi|170044609|ref|XP_001849934.1| polyadenylate-binding protein 1 [Culex quinquefasciatus]
gi|167867688|gb|EDS31071.1| polyadenylate-binding protein 1 [Culex quinquefasciatus]
Length = 628
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/414 (53%), Positives = 296/414 (71%), Gaps = 12/414 (2%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD +IDNKA+ DTF+AFG +LSCKVA
Sbjct: 63 MNFDLIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D G SKGYGFV FE EE+A +I+ +NGML+N K+V+VG F+ R+ER ++ + F
Sbjct: 123 QDEKGNSKGYGFVHFETEESANTSIEKVNGMLLNAKKVFVGRFIPRKEREKELGEKAKLF 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV N + +TDE LK++F +GTITS VM + KSR FGFV F++P++A AV++
Sbjct: 183 TNVYVKNFGDELTDESLKEMFEKYGTITSHRVM-IKENKSRGFGFVAFENPESAEVAVQE 241
Query: 267 LNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LNG D KV YVGRAQK+ ER+ +L+ +FEQ ++ R + +G NLY+KNLDDSI+DE+
Sbjct: 242 LNGKELGDGKVLYVGRAQKKNERQMELKRRFEQLKMERLTRYQGVNLYVKNLDDSIDDER 301
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L++ FS FGTITS KVM+++ G SKG GF FS EEAT+A+ EMNG+++G KPLYVA+A
Sbjct: 302 LRKEFSPFGTITSAKVMLEE-GRSKGFGFVCFSAAEEATKAVTEMNGRIVGSKPLYVALA 360
Query: 386 QRKEERKARLQAQFAQIRAPGGMSPLAS-----GIPGYHHGAPRLGPQQLYYGQ 434
QRKE+RKA L +Q+ Q A M + G GY+ P + Q ++G+
Sbjct: 361 QRKEDRKAHLASQYMQRMANMRMQHMGQIFQPGGNGGYY--VPTIPQPQRFFGK 412
>gi|449284083|gb|EMC90664.1| Polyadenylate-binding protein 1, partial [Columba livia]
Length = 573
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 265/590 (44%), Positives = 361/590 (61%), Gaps = 53/590 (8%)
Query: 82 AANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGT 141
A A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG
Sbjct: 1 AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 60
Query: 142 VLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ- 200
+LSCKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 61 ILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 119
Query: 201 -NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDA 259
+ +FTNVY+ N E + DE LK++FG FG S VM D GKS+ FGFV+F+ +
Sbjct: 120 GARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHED 179
Query: 260 AAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDD 319
A AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD
Sbjct: 180 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 239
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KP
Sbjct: 240 GIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 298
Query: 380 LYVAVAQRKEERKARLQAQFAQ----IRAPGG--MSPLASGIP-GYHHGA-PRLGPQQLY 431
LYVA+AQRKEER+A L Q+ Q +RA ++P P GY A P+ + Y
Sbjct: 299 LYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRAAY 358
Query: 432 Y--------GQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQR 479
Y + +P A + FQ PG +RP P P+ R P
Sbjct: 359 YPTNQLAQLARPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVM 414
Query: 480 TGVRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVS 529
+ R + + Q P+ +R Q +Y RN Q + + V +
Sbjct: 415 STQRVANTSTQTMGPRPAAAATAATPSVRTVPQ-YKYAAGVRN-PQQHLNTQPQVAMQ-- 470
Query: 530 GMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
PA V+ P+ S LASA P ++ +MLGE+L+PL++++ P A K+TGMLL
Sbjct: 471 -QPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQSMHPTLAGKITGMLL 523
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLGSLAV 635
E+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G +V
Sbjct: 524 EIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNNPTGVPSV 573
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 166/299 (55%), Gaps = 25/299 (8%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ ++ +L+++++ LYD FS ++S +V D++ S GY +V++ + A
Sbjct: 32 SGVGNI--FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAA 87
Query: 83 ANAKEALNFMPINGKPIRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDTF 136
A E +N M +N + + + R+ + R + NV+IKN +D++ L + F
Sbjct: 88 ERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELF 147
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG LS KV D +G+SKG+GFV FE E AQ A+ +NG +N KQ+YVG ++ E
Sbjct: 148 GKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 207
Query: 197 RAQQNVSPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
R Q + KF N+YV NL + + DE L+K F FGTITSA VM +
Sbjct: 208 R-QTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG- 265
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
G+S+ FGFV F SP+ A AV ++NG K YV AQ++ ER+A L ++ Q S
Sbjct: 266 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMAS 324
>gi|2393873|gb|AAB70164.1| poly(A)-binding protein testis-specific isoform [Mus musculus]
Length = 603
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 256/614 (41%), Positives = 363/614 (59%), Gaps = 40/614 (6%)
Query: 44 LYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMY 103
LY+ FS ++S+RV RD R SLGYA VN+ P DA A + +NF I GKP+RIM+
Sbjct: 2 LYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDTMNFDVIKGKPVRIMW 61
Query: 104 SHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQF 163
S RDPS+R+SG GNVFIKNL+ +IDNKAL DTF+AFG +LSCKV D NG SKG+GFV F
Sbjct: 62 SQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENG-SKGHGFVHF 120
Query: 164 ENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDE 221
E EEAA+ AI+ +NGML+ND++V+VG F ++ER + + +FTNVY+ N + + DE
Sbjct: 121 ETEEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGTGTKEFTNVYIKNFGDRMDDE 180
Query: 222 DLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGR 281
L +FG FG I S VM D GKS+ FGFV+F+ + A AV+++NG N K YVGR
Sbjct: 181 TLNGLFGRFGQILSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGR 240
Query: 282 AQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKV 341
AQK+ +R +L+ KFEQ + + +G NLY+KNLDD I+DE+L++ FS FGTITS KV
Sbjct: 241 AQKKDDRHTELKHKFEQVTQDKSIRYQGINLYVKNLDDGIDDERLQKEFSPFGTITSTKV 300
Query: 342 MVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ 401
M + G SKG GF FS PEEAT+A++EMNG+++ KPLYVA+AQRKEER+A L Q+ Q
Sbjct: 301 MTE-GGRSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALAQRKEERQAHLTNQYIQ 359
Query: 402 IRA-----PGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPG-LMPPQAAGYGFQQQVFP 455
A P ++P Y A PQ P + P+ + Q P
Sbjct: 360 RMASVRSGPNPVNPYQPASSSYSVAAV---PQTQNCVPCCPSQIAQPRPSARWIAQGSRP 416
Query: 456 GLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGI--RYLDNARNG 513
P P I P + + T VR S + Q+ + N++ I + A +
Sbjct: 417 HPFPNVPGAIHPAAPRSSL-----TTVRPSSSHVQVTTAHRITNTSAQITGQRPAPASSA 471
Query: 514 TDQSVVSMVPVPF-------------EVSGMPATPVETPRPVPVPISTLTSALASASPDD 560
T V S+ + +++ PA ++ P T+++ +P +
Sbjct: 472 TATPVHSIPQYKYAAGVQNSQQHLNAQLAQQPAVCIQGQEP-------WTASMLVTAPQE 524
Query: 561 RTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEA 620
+MLGE+L+PL++ + P A K+TGMLL++D +E L ++ESP + ++ EA+A LQ
Sbjct: 525 PKQMLGERLFPLIQAMHPTLAGKITGMLLDIDNSEPLRMLESPVSRCSRAEEAVATLQAH 584
Query: 621 AARSDVNEKLGSLA 634
+ + +GS +
Sbjct: 585 QVKEAAQKAVGSTS 598
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 162/298 (54%), Gaps = 23/298 (7%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GNV ++ +L + ++ LYD FS ++S +V D++ S G+ +V++ + A
Sbjct: 71 SGVGNV--FIKNLNKTIDNKALYDTFSAFGNILSCKVVSDEN--GSKGHGFVHFETEEAA 126
Query: 83 ANAKEALNFMPINGKPIRI-MYSHRDPSIRKSGYG-----NVFIKNLDTSIDNKALCDTF 136
A E +N M +N + + + + + + G G NV+IKN +D++ L F
Sbjct: 127 ERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGTGTKEFTNVYIKNFGDRMDDETLNGLF 186
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG +LS KV D G+SKG+GFV FE E AQ A+ +NG +N K +YVG ++ +
Sbjct: 187 GRFGQILSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQKKDD 246
Query: 197 R----------AQQNVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG 244
R Q+ S ++ N+YV NL + + DE L+K F FGTITS VM + G
Sbjct: 247 RHTELKHKFEQVTQDKSIRYQGINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEG-G 305
Query: 245 KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
+S+ FGFV F SP+ A AV ++NG K YV AQ++ ER+A L ++ Q S
Sbjct: 306 RSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALAQRKEERQAHLTNQYIQRMAS 363
>gi|395512247|ref|XP_003760354.1| PREDICTED: polyadenylate-binding protein 1 [Sarcophilus harrisii]
Length = 654
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 262/590 (44%), Positives = 353/590 (59%), Gaps = 58/590 (9%)
Query: 79 PQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAA 138
P + A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+A
Sbjct: 82 PINRKRALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSA 141
Query: 139 FGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA 198
FG +LSCKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER
Sbjct: 142 FGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE 200
Query: 199 QQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQS 256
+ + +FTNVY+ N E + DE LK++FG FG S VM D GKS+ FGFV+F+
Sbjct: 201 AELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFER 260
Query: 257 PDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
+ A AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KN
Sbjct: 261 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKN 320
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
LDD I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++
Sbjct: 321 LDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVA 379
Query: 377 RKPLYVAVAQRKEERKARLQAQFAQ----IRA-----------PGGMSPLASGIPGYHHG 421
KPLYVA+AQRKEER+A L Q+ Q +RA P G + IP +
Sbjct: 380 TKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPPSGY--FMAAIPQTQNR 437
Query: 422 A--------PRLGPQQLYYGQGT--------PGLMPPQAAGYGFQQQVFPGLRPGGPNYI 465
A +L P + QG PG + P A + F +RP
Sbjct: 438 AAYYPASQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAP-----RPPFSTMRPASSQVP 492
Query: 466 MPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVP 525
QR + +T R P +R Q +Y RN Q + + V
Sbjct: 493 RVMSTQRVANTSTQTMGPRPAAAAAAATPA-VRTVPQ-YKYAAGVRN-PQQHLNAQPQVT 549
Query: 526 FEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVT 585
+ PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+T
Sbjct: 550 MQ---QPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKIT 600
Query: 586 GMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
GMLLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 601 GMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 650
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 166/299 (55%), Gaps = 25/299 (8%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ ++ +L+++++ LYD FS ++S +V D++ S GY +V++ + A
Sbjct: 116 SGVGNI--FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAA 171
Query: 83 ANAKEALNFMPINGKPIRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDTF 136
A E +N M +N + + + R+ + R + NV+IKN +D++ L + F
Sbjct: 172 ERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELF 231
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG LS KV D +G+SKG+GFV FE E AQ A+ +NG +N KQ+YVG ++ E
Sbjct: 232 GKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 291
Query: 197 RAQQNVSPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
R Q + KF N+YV NL + + DE L+K F FGTITSA VM +
Sbjct: 292 R-QTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG- 349
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
G+S+ FGFV F SP+ A AV ++NG K YV AQ++ ER+A L ++ Q S
Sbjct: 350 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMAS 408
>gi|125808454|ref|XP_001360757.1| GA18673 [Drosophila pseudoobscura pseudoobscura]
gi|54635929|gb|EAL25332.1| GA18673 [Drosophila pseudoobscura pseudoobscura]
Length = 640
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/411 (54%), Positives = 284/411 (69%), Gaps = 6/411 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL Q++NE+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I KPIRIM+S RDPS+R+SG GNVFIKNLD IDNKA+ DTF+AFG +LSCKVA
Sbjct: 63 MNFDLIRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKGIDNKAIYDTFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
ID G SKGYGFV FE EEAA +I +NGML+N K+VYVG F+ R+ER ++ + F
Sbjct: 123 IDEKGNSKGYGFVHFETEEAANMSIDRVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV N E DE LK+ F +G ITS VM DGKS+ FGFV +++ +AA AAV+
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAYETTEAAEAAVQA 242
Query: 267 LNGT-TNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LNG K YV RAQK+AER+ +L+ KFE+ + R++ + G NLY+KNLDD+I+DE+
Sbjct: 243 LNGKDMGESKSLYVARAQKKAERQQELKRKFEELKKKRHDSVFGVNLYVKNLDDTIDDER 302
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L++ FS +GTITS KVM D+ G SKG GF F P EAT A+ E+NG++IG KPLYVA+A
Sbjct: 303 LRKDFSMYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTELNGRVIGSKPLYVALA 362
Query: 386 QRKEERKARLQAQFAQIRAPGGMSPLASGI-PGYHHG--APRLGPQQLYYG 433
QRKEERKA L +Q+ + M L P G P + P Q ++G
Sbjct: 363 QRKEERKAHLASQYMRHMTGMRMQQLGQMFQPNTTGGFFVPTIPPSQRFFG 413
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 55/70 (78%)
Query: 549 LTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
+ S LA+A+P ++ ++LGE+LYP++E + A K+TGMLLE++ +E+LH++E EALK
Sbjct: 562 IASLLANANPQEQKQILGERLYPMIERMHAALAGKITGMLLEIENSELLHMLEDKEALKA 621
Query: 609 KVAEAMAVLQ 618
KV EA+AVLQ
Sbjct: 622 KVEEAVAVLQ 631
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEEATRALN 368
A+LY+ +L IN+ L E FS G + S +V D S G + F P +A RAL+
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 369 EMNGKMIGRKPLYVAVAQR 387
MN +I KP+ + +QR
Sbjct: 62 TMNFDLIRNKPIRIMWSQR 80
>gi|148674413|gb|EDL06360.1| mCG5434 [Mus musculus]
Length = 534
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/416 (51%), Positives = 290/416 (69%), Gaps = 4/416 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V ES LY++FS + ++S+RVCRD + R SLGYAY+N+ P DA A +
Sbjct: 12 SLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I G+PIRIM+SHRDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG++LS KV
Sbjct: 72 MNFEVIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKVV 131
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
+ +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F RQ+R + + F
Sbjct: 132 YNEHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALGF 190
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TN+YV NL V ++ L+ +F FG + S VM+DS+G+SR FGFVNF+ + A AV+
Sbjct: 191 TNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDH 250
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
+NG + ++ YVGRAQKRAER+++L+ +FEQ + R + +G NLY+KNLDDSINDE+L
Sbjct: 251 MNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDERL 310
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
KE+FS +G ITS KVM + SKG GF FS PEEAT+A+ EMNG+++G KPLYVA+AQ
Sbjct: 311 KEVFSTYGVITSAKVMTES-SHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 387 RKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPP 442
RKEERKA L Q+ + + +S P+ Q +YY G+ M P
Sbjct: 370 RKEERKAILTNQYRRRPSHPVLSSFQQPTSYLLPAVPQSTAQAVYYSSGSITPMQP 425
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 107/188 (56%), Gaps = 18/188 (9%)
Query: 26 GNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANA 85
G ++YV +L NV+E +L DLFSQ + SV+V RD S S G+ +VN+ ++A A
Sbjct: 189 GFTNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRD-SNGQSRGFGFVNFEKHEEAQKA 247
Query: 86 KEALNFMPINGKPIRI----MYSHRDPSI----------RKSGYG--NVFIKNLDTSIDN 129
+ +N ++G+ + + + R + R++ Y N+++KNLD SI++
Sbjct: 248 VDHMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSIND 307
Query: 130 KALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVG 189
+ L + F+ +G + S KV +S+ SKG+GFV F + E A A+ +NG ++ K +YV
Sbjct: 308 ERLKEVFSTYGVITSAKVMTESS-HSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVA 366
Query: 190 LFVRRQER 197
L R++ER
Sbjct: 367 LAQRKEER 374
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LYV +L+ ++N+ +L ++FS + S +V + S S G+ +V +S+P++A
Sbjct: 291 YQGVNLYVKNLDDSINDERLKEVFSTYGVITSAKVMTESSH--SKGFGFVCFSSPEEATK 348
Query: 85 AKEALNFMPINGKPIRIMYSHR 106
A +N + KP+ + + R
Sbjct: 349 AVTEMNGRIVGTKPLYVALAQR 370
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD-QHGFSKGSGFAAFSMPEEATRALN 368
++LY+ +L + + L E+FS G I S +V D S G + F P +A RAL+
Sbjct: 11 SSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 369 EMNGKMIGRKPLYVAVAQR 387
MN ++I +P+ + + R
Sbjct: 71 TMNFEVIKGQPIRIMWSHR 89
>gi|194753367|ref|XP_001958985.1| GF12652 [Drosophila ananassae]
gi|190620283|gb|EDV35807.1| GF12652 [Drosophila ananassae]
Length = 639
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/411 (54%), Positives = 281/411 (68%), Gaps = 6/411 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL Q++NES L+D FS V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLHQDINESNLFDKFSSAGPVLSIRVCRDVMSRRSLGYAYVNFQQPADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF + KPIRIM+S RDPS+R+SG GNVFIKNLD +IDNKA+ DTF+AFG +LSCKVA
Sbjct: 63 MNFDLLRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKTIDNKAIYDTFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D SKGYGFV FE EEAA +I +NGML+N K+VYVG F+ R+ER ++ + F
Sbjct: 123 TDEKANSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV N E DE LK+ F +G ITS VM DGKS+ FGFV F++ +AA AAV+
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQA 242
Query: 267 LNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LNG + K YV RAQK+AER+ +L+ KFE+ + R++ G NLY+KNLDDSI+DE+
Sbjct: 243 LNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKKKRHDSAFGVNLYVKNLDDSIDDER 302
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L + FS +GTITS KVM D+ G SKG GF F EAT A+ E+NG+++G KPLYVA+A
Sbjct: 303 LCKEFSPYGTITSAKVMTDEEGRSKGFGFVCFISANEATCAVTELNGRVVGSKPLYVALA 362
Query: 386 QRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGA---PRLGPQQLYYG 433
QRKEERKA L +Q+ + M L P G P + P Q ++G
Sbjct: 363 QRKEERKAHLASQYMRHMTGMRMQQLGQIFPPNAAGGFFVPTMPPNQRFFG 413
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 70/114 (61%), Gaps = 12/114 (10%)
Query: 505 RYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRM 564
+Y N RN Q + P+P ++ G + + + S LA+A P ++ ++
Sbjct: 529 KYTSNMRNPPVQQMPQAQPMPPQLQGKNSEKL------------IASLLANAKPQEQKQI 576
Query: 565 LGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
LGE+LYP++E + P A K+TGMLLE++ +E+LH+IE EALK KV EA+AVLQ
Sbjct: 577 LGERLYPMIERMHPSLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQ 630
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD-QHGFSKGSGFAAFSMPEEATRALN 368
A+LY+ +L IN+ L + FS G + S +V D S G + F P +A RAL+
Sbjct: 2 ASLYVGDLHQDINESNLFDKFSSAGPVLSIRVCRDVMSRRSLGYAYVNFQQPADAERALD 61
Query: 369 EMNGKMIGRKPLYVAVAQR 387
MN ++ KP+ + +QR
Sbjct: 62 TMNFDLLRNKPIRIMWSQR 80
>gi|195487595|ref|XP_002091975.1| GE11925 [Drosophila yakuba]
gi|194178076|gb|EDW91687.1| GE11925 [Drosophila yakuba]
Length = 634
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/383 (56%), Positives = 276/383 (72%), Gaps = 5/383 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL Q+VNES L+D FS V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF + KPIRIM+S RDPS+R+SG GNVFIKNLD +IDNKA+ DTF+AFG +LSCKVA
Sbjct: 63 MNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D G SKGYGFV FE EEAA +I +NGML+N K+VYVG F+ R+ER ++ + F
Sbjct: 123 TDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV N E DE LK+ F +G ITS VM DGKS+ FGFV F++ +AA AAV+
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQA 242
Query: 267 LNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LNG + K YV RAQK+AER+ +L+ KFE+ + R+E + G NLY+KNLDD+I+D++
Sbjct: 243 LNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDR 302
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L+ FS +G ITS KVM D+ G SKG GF F+ P EAT A+ E+NG+++G KPLYVA+A
Sbjct: 303 LRVAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAPSEATCAVTELNGRVVGSKPLYVALA 362
Query: 386 QRKEERKARLQAQFAQIRAPGGM 408
QRKEERKA L +Q+ +R GM
Sbjct: 363 QRKEERKAHLASQY--MRHMTGM 383
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 73/121 (60%), Gaps = 14/121 (11%)
Query: 498 RNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASAS 557
R SN +Y N RN Q + P+P ++ G + + + S LA+A
Sbjct: 519 RTSN--YKYTSNMRNPPVQQLHQTQPIPQQLQGKNSEKL------------IASLLANAK 564
Query: 558 PDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVL 617
P ++ ++LGE+LYP++E++ A K+TGMLLE++ +E+LH+IE EALK KV EA+AVL
Sbjct: 565 PQEQKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVL 624
Query: 618 Q 618
Q
Sbjct: 625 Q 625
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEEATRALN 368
A+LY+ +L +N+ L + FS G + S +V D S G + F P +A RAL+
Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 369 EMNGKMIGRKPLYVAVAQR 387
MN ++ KP+ + +QR
Sbjct: 62 TMNFDLVRNKPIRIMWSQR 80
>gi|302844953|ref|XP_002954016.1| hypothetical protein VOLCADRAFT_82578 [Volvox carteri f.
nagariensis]
gi|300260828|gb|EFJ45045.1| hypothetical protein VOLCADRAFT_82578 [Volvox carteri f.
nagariensis]
Length = 620
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/440 (53%), Positives = 295/440 (67%), Gaps = 29/440 (6%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYS---NPQDAA 83
N SLYVGDLE++V E+QL++LFS V V S+RVCRD R SLGYAYVNY+ +PQ A
Sbjct: 20 NSSLYVGDLEKDVTEAQLFELFSSVGPVASIRVCRDAVTRRSLGYAYVNYNSALDPQAAE 79
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A E LN+ +NGKP+RIM+SHRDPS RKSG GN+FIKNLD SID KAL DTF+AFG +L
Sbjct: 80 RAMETLNYHVLNGKPMRIMWSHRDPSARKSGVGNIFIKNLDKSIDAKALHDTFSAFGKIL 139
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ-QNV 202
SCKVA D+NG SKGYGFV FE++ AA AI+ +N I K VYVG F +R +R Q ++V
Sbjct: 140 SCKVATDANGVSKGYGFVHFEDQAAADRAIQTVNQKEIEGKIVYVGPFQKRADRPQGKDV 199
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+TNV+V NL + D++L K+ FG +TSA+VMKD G S+ FGF+NF+ + AA
Sbjct: 200 ---YTNVFVKNLPAELGDDELSKMATEFGEVTSAVVMKDEKGSSKGFGFINFKDAECAAK 256
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
VE LN KV Y GRAQK+ EREA LR K E+ + RY K +G NLY+KNL D ++
Sbjct: 257 CVEALNDKEIGGKVLYAGRAQKKTEREAMLRQKVEESKQERYLKYQGMNLYVKNLADEVD 316
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
D+ L++LF+ GTITSCKVM D G SKG GF F+ +EATRA+ EMNGKM+ KPLYV
Sbjct: 317 DDALRDLFTSCGTITSCKVMKDTSGKSKGFGFVCFTSHDEATRAVTEMNGKMVKGKPLYV 376
Query: 383 AVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPP 442
A+AQRK+ R+A+L+A G M+ + + G +GP YG PG MP
Sbjct: 377 ALAQRKDVRRAQLEANVQNRLGMGAMTRPPNPMTG-------MGP----YG---PGAMPF 422
Query: 443 QAAGYGFQQQVFPGLRPGGP 462
AAG PG P GP
Sbjct: 423 FAAG--------PGGMPAGP 434
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 45/61 (73%)
Query: 558 PDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVL 617
P+ + M+GE+LYP V ++P A K+TGMLLEMD E+L L+ES EAL KV EA+AVL
Sbjct: 549 PEQQKMMIGERLYPQVAELQPDLAGKITGMLLEMDNAELLMLLESHEALVAKVDEAIAVL 608
Query: 618 Q 618
+
Sbjct: 609 K 609
>gi|363894957|gb|AEW42987.1| putative polyadenylate-binding protein 1, partial [Haliotis
diversicolor]
Length = 563
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/385 (56%), Positives = 282/385 (73%), Gaps = 7/385 (1%)
Query: 22 PSG--YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
P+G Y SLYVGDL +V E+ L++ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 PAGPSYPMASLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDTIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCK+A D NG SKGYGFV FE EEAA+ AI+ +NGML+N K+VYVG F+ R+ER
Sbjct: 123 GNILSCKIASDENG-SKGYGFVHFETEEAARQAIEKVNGMLLNGKKVYVGKFIPRKERIA 181
Query: 200 --QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ +F NVY+ N + + D+ ++++F FG I SA VM D GKSR FGFV+++ P
Sbjct: 182 LLGDKMKRFNNVYIKNFGDELDDDKIRELFDPFGKIISAKVMTDEIGKSRGFGFVSYEEP 241
Query: 258 DAAAAAVEKLNGT-TNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
+AA AV+ LNG KV Y GRAQK+AER+A+L+ KFE+ ++ R + +G NLY+KN
Sbjct: 242 EAAEKAVDNLNGMELGGGKVLYAGRAQKKAERQAELKDKFEKIKMERINRYQGVNLYVKN 301
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
LDD ++DE+L++ FS+FGTITS +VM + G SKG GF FS PEEAT+A+ EMNG++I
Sbjct: 302 LDDVVDDERLRKEFSQFGTITSARVM-SEGGRSKGFGFVCFSSPEEATKAVTEMNGRIIV 360
Query: 377 RKPLYVAVAQRKEERKARLQAQFAQ 401
KPLYVA+AQRKE+R+A L +Q+ Q
Sbjct: 361 SKPLYVALAQRKEDRRAHLASQYMQ 385
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 161/289 (55%), Gaps = 17/289 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N I + + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDTIKGRPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ D +G S+ +GFV+F++ +AA A+EK+NG N K YVG+ R ER A L
Sbjct: 128 CKIASDENG-SKGYGFVHFETEEAARQAIEKVNGMLLNGKKVYVGKFIPRKERIALL--- 183
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+++ R+ N+Y+KN D ++D+K++ELF FG I S KVM D+ G S+G GF
Sbjct: 184 --GDKMKRFN-----NVYIKNFGDELDDDKIRELFDPFGKIISAKVMTDEIGKSRGFGFV 236
Query: 356 AFSMPEEATRALNEMNG-KMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++ PE A +A++ +NG ++ G K LY AQ+K ER+A L+ +F +I+
Sbjct: 237 SYEEPEAAEKAVDNLNGMELGGGKVLYAGRAQKKAERQAELKDKFEKIK 285
>gi|326917956|ref|XP_003205259.1| PREDICTED: polyadenylate-binding protein 1-like [Meleagris
gallopavo]
Length = 652
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 264/587 (44%), Positives = 360/587 (61%), Gaps = 53/587 (9%)
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 83 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 142
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 143 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 201
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK++FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 202 AKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 261
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 262 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 321
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 322 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 380
Query: 383 AVAQRKEERKARLQAQFAQ----IRAPGG--MSPLASGIP-GYHHGA-PRLGPQQLYY-- 432
A+AQRKEER+A L Q+ Q +RA ++P P GY A P+ + YY
Sbjct: 381 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRAAYYPT 440
Query: 433 ------GQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTGV 482
+ +P A + FQ PG +RP P P+ R P +
Sbjct: 441 NQLAQLARPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMSTQ 496
Query: 483 RRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMP 532
R + + Q P+ +R Q +Y RN Q + + V + P
Sbjct: 497 RVANTSTQTMGPRPAAAATAATPAVRTVPQ-YKYAAGVRN-PQQHLNTQPQVAMQ---QP 551
Query: 533 ATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMD 592
A V+ P+ S LASA P ++ +MLGE+L+PL++++ P A K+TGMLLE+D
Sbjct: 552 AVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQSMHPTLAGKITGMLLEID 605
Query: 593 QTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLGSLAV 635
+E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G +V
Sbjct: 606 NSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNNPTGVPSV 652
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 166/299 (55%), Gaps = 25/299 (8%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ ++ +L+++++ LYD FS ++S +V D++ S GY +V++ + A
Sbjct: 111 SGVGNI--FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAA 166
Query: 83 ANAKEALNFMPINGKPIRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDTF 136
A E +N M +N + + + R+ + R + NV+IKN +D++ L + F
Sbjct: 167 ERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELF 226
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG LS KV D +G+SKG+GFV FE E AQ A+ +NG +N KQ+YVG ++ E
Sbjct: 227 GKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 286
Query: 197 RAQQNVSPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
R Q + KF N+YV NL + + DE L+K F FGTITSA VM +
Sbjct: 287 R-QTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG- 344
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
G+S+ FGFV F SP+ A AV ++NG K YV AQ++ ER+A L ++ Q S
Sbjct: 345 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMAS 403
>gi|392346932|ref|XP_230831.6| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Rattus
norvegicus]
Length = 609
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 264/618 (42%), Positives = 369/618 (59%), Gaps = 61/618 (9%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V E+ LY++FS + ++S+RVCRD + R SLGYAY+N+ P DA A +
Sbjct: 12 SLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I G+PIRIM+SHRDP +R+SG GN+FIKNL+ SIDNKAL DTF+ FG++LS KV
Sbjct: 72 MNFEMIKGQPIRIMWSHRDPGLRRSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKVV 131
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
+ +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F RQ+R + + F
Sbjct: 132 YNEHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALGF 190
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TN+YV NL + ++ L+ +F FG S VM+DS+G+SR FGF+NF+ + A AV+
Sbjct: 191 TNIYVKNLRVDMDEQGLQDLFSQFGKTQSVKVMRDSNGQSRGFGFINFEKHEEAQKAVDH 250
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
+NG + ++ YVGRAQKRAER+ +L+ +FEQ + R + +G NLY+KNLDDSIND++L
Sbjct: 251 MNGKEVSGQLLYVGRAQKRAERQNELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDDRL 310
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
KE+FS +G ITS KVM + SKG GF FS PEEAT+A+ EMNG+++G KPLYVA+AQ
Sbjct: 311 KEVFSTYGVITSAKVMTES-SHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 387 RKEERKARLQAQFAQIRAPGGMS----PLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPP 442
RKEERKA L Q+ + + +S P + +P H Q +YY + M P
Sbjct: 370 RKEERKAILTNQYRRRLSRSVLSSFQQPTSYLLPAVHQST----TQTMYYSSASIAPMQP 425
Query: 443 Q----AAGYGFQQQVFPGLRPGGPNYIMPY----------------HLQRQVHPGQRTGV 482
A +G P P P+ H QR V+ G +T
Sbjct: 426 DPRWTAQPHGPSSTCPPAASVVQPLSTAPHPCIHLSSASQASSQVPHTQRVVNIGTQTTG 485
Query: 483 RRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVP--VPFEVSGMPATPVETPR 540
+ QP + + ++ +G +S V VP P VS + A P+
Sbjct: 486 PGGEGSCIPGQPLLAHRGSSAV----HSAHGVQESTV-YVPGHQPLTVSMLDAAPLH--- 537
Query: 541 PVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLI 600
++ +M+GE+LY L+ + K+TGMLLEMD E+L L+
Sbjct: 538 -------------------EQKQMIGERLYSLIHDACAPLTGKITGMLLEMDNLELLLLL 578
Query: 601 ESPEALKTKVAEAMAVLQ 618
ESPE+L K+ EA+AVL+
Sbjct: 579 ESPESLHAKIEEAVAVLK 596
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 23/209 (11%)
Query: 26 GNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANA 85
G ++YV +L +++E L DLFSQ + SV+V RD S S G+ ++N+ ++A A
Sbjct: 189 GFTNIYVKNLRVDMDEQGLQDLFSQFGKTQSVKVMRD-SNGQSRGFGFINFEKHEEAQKA 247
Query: 86 KEALNFMPINGKPIRIMYSHRDPSI--------------RKSGYG--NVFIKNLDTSIDN 129
+ +N ++G+ + + + + R++ Y N+++KNLD SI++
Sbjct: 248 VDHMNGKEVSGQLLYVGRAQKRAERQNELKRRFEQMKQERQNRYQGVNLYVKNLDDSIND 307
Query: 130 KALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVG 189
L + F+ +G + S KV +S+ SKG+GFV F + E A A+ +NG ++ K +YV
Sbjct: 308 DRLKEVFSTYGVITSAKVMTESS-HSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVA 366
Query: 190 LFVRRQERAQQNVSPKFTNVYVNNLAETV 218
L R++ER TN Y L+ +V
Sbjct: 367 LAQRKEER-----KAILTNQYRRRLSRSV 390
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LYV +L+ ++N+ +L ++FS + S +V + S S G+ +V +S+P++A
Sbjct: 291 YQGVNLYVKNLDDSINDDRLKEVFSTYGVITSAKVMTESSH--SKGFGFVCFSSPEEATK 348
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSI 127
A +N + KP+ + + R RK+ N + + L S+
Sbjct: 349 AVTEMNGRIVGTKPLYVALAQRKEE-RKAILTNQYRRRLSRSV 390
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD-QHGFSKGSGFAAFSMPEEATRALN 368
++LY+ +L + + L E+FS GTI S +V D S G + F P +A RAL+
Sbjct: 11 SSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 369 EMNGKMIGRKPLYVAVAQR 387
MN +MI +P+ + + R
Sbjct: 71 TMNFEMIKGQPIRIMWSHR 89
>gi|354498761|ref|XP_003511482.1| PREDICTED: polyadenylate-binding protein 1-like, partial
[Cricetulus griseus]
Length = 571
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 257/581 (44%), Positives = 348/581 (59%), Gaps = 48/581 (8%)
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 3 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 62
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 63 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 121
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 122 AKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 181
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 182 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 241
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KP YV
Sbjct: 242 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPFYV 300
Query: 383 AVAQRKEERKARLQAQFAQIRAPGGMSP---------------LASGIPGYHHGAPRLGP 427
A+AQRKEER+A L Q Q A P + IP + A P
Sbjct: 301 ALAQRKEERQAHLTNQHMQRMASVQAVPNPVINPYQPAPPSGYFMAAIPQTQNRAAYYPP 360
Query: 428 QQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTGVR 483
Q+ + +P A + FQ PG +RP P P+ R P + R
Sbjct: 361 SQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMSTQR 416
Query: 484 RSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPA 533
+ + Q P+ +R Q +Y RN Q + + V + PA
Sbjct: 417 VANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRN-PQQHLNAQPQVTMQ---QPA 471
Query: 534 TPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQ 593
V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGMLLE+D
Sbjct: 472 VHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDN 525
Query: 594 TEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
+E+LH++ESPE+L++KV EA+AVLQ A+ + + S A
Sbjct: 526 SELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSAA 566
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 103/187 (55%), Gaps = 20/187 (10%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + +++++ +L DLF + +SV+V D+S +S G+ +V++ +DA A +
Sbjct: 126 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 184
Query: 88 ALNFMPINGKPIRIMYSHR-----------------DPSIRKSGYGNVFIKNLDTSIDNK 130
+N +NGK I + + + D R G N+++KNLD ID++
Sbjct: 185 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDE 243
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L F+ FGT+ S KV ++ G+SKG+GFV F + E A A+ +NG ++ K YV L
Sbjct: 244 RLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPFYVAL 302
Query: 191 FVRRQER 197
R++ER
Sbjct: 303 AQRKEER 309
>gi|294659673|ref|XP_002770625.1| DEHA2G12474p [Debaryomyces hansenii CBS767]
gi|218511736|sp|Q6BI95.2|PABP_DEBHA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|199434145|emb|CAR65959.1| DEHA2G12474p [Debaryomyces hansenii CBS767]
Length = 627
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 264/626 (42%), Positives = 370/626 (59%), Gaps = 52/626 (8%)
Query: 8 AATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRS 67
AA +A S T+A SLYVG+L +VNE+ L+++FS + QV S+RVCRD +
Sbjct: 40 AADSAQVSDTSA---------SLYVGELNPSVNEALLFEIFSPIGQVASIRVCRDAVTKK 90
Query: 68 SLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSI 127
SLGYAYVN+ +D A E LN+ I G+P RIM+S RDPS+R++G GN+FIKNL +I
Sbjct: 91 SLGYAYVNFHKFEDGEKAIEDLNYSLIEGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAI 150
Query: 128 DNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVY 187
DNKAL DTF AFG +LSCKVA D G SK +GFV +E EAA+ AI+ +NGML+ND++VY
Sbjct: 151 DNKALHDTFTAFGKILSCKVATDDMGISKCFGFVHYETAEAAEAAIENVNGMLLNDREVY 210
Query: 188 VGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK 245
VG + +++R + + FTNVY N+ ++E+ KK+F +G ITS + KD +GK
Sbjct: 211 VGKHISKKDRESKFEEMKANFTNVYAKNIDLDFSEEEFKKLFEAYGKITSIYLEKDHEGK 270
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYE 305
S+ FGFVNF++ ++A AV++LN N + YVGRAQK+ ER +L+ ++E R+ +
Sbjct: 271 SKGFGFVNFENHESAVKAVDELNDKEINGQKIYVGRAQKKRERLEELKKQYENTRLEKLS 330
Query: 306 KLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATR 365
K +G NL++KNLDD+I+ EKL+E F FG+ITS +VMVD+ G SKG GF FS PEEAT+
Sbjct: 331 KYQGVNLFIKNLDDTIDSEKLEEEFKPFGSITSARVMVDETGKSKGFGFVCFSSPEEATK 390
Query: 366 ALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLAS--GIPGYHHGAP 423
A+ EMN +MI KPLYVA+AQRK+ R+++L+ Q Q R M A+ GIPG
Sbjct: 391 AITEMNQRMIYGKPLYVALAQRKDVRRSQLEQQI-QARNQMRMQNAAATGGIPGQF---- 445
Query: 424 RLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVR 483
+ P ++YGQ PG PP G G FPG P +MP + Q+ P Q R
Sbjct: 446 -IPP--MFYGQ-QPGFFPPNGRGNG----PFPG---PNPQMMMP---RGQIPPPQGQWPR 491
Query: 484 RSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVP 543
N + P + G + + A G Q P
Sbjct: 492 PGPNGQPV--PVYGMPPVYGGDFNNGANGGRQQRGY--------------YPNRNQNQKG 535
Query: 544 VPISTLTSALASASPDDRTRMLGEQLYPLVENI----EPVHASKVTGMLLEMDQTEVLHL 599
L + +A+A D + R+LGE+LYP + + EP A K+TGM+L++D E+L L
Sbjct: 536 RQQKDLAAIIANAPADQQKRILGEELYPKIVSTGKAQEPEAAGKITGMMLDLDNEEILAL 595
Query: 600 IESPEALKTKVAEAMAVLQEAAARSD 625
+E E T +A+ +E S+
Sbjct: 596 LEDDELFNTHFEDALTAFEEYKKSSE 621
>gi|320581683|gb|EFW95902.1| Poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 629
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 264/637 (41%), Positives = 361/637 (56%), Gaps = 81/637 (12%)
Query: 15 SATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYV 74
S+T + + SLYVG+L+ +V ES L+++FS + QV ++RVCRD + SLGYAYV
Sbjct: 34 SSTAESTQNSETLASLYVGELDPSVTESDLFEVFSPIGQVSTIRVCRDAVSKQSLGYAYV 93
Query: 75 NYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCD 134
N+ + D A E LN+ PI GK RIM+S RDPS+R++G GN+FIKNL +IDNK L D
Sbjct: 94 NFQSHADGEKALEELNYTPIKGKACRIMWSQRDPSLRRNGSGNIFIKNLHPAIDNKTLHD 153
Query: 135 TFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRR 194
TF+AFG +LSCK+A D NG SKG+GFV +E E+A+ AI+ +NGML+ND +VYVG + +
Sbjct: 154 TFSAFGKILSCKIATDENGNSKGFGFVHYEESESAKAAIENVNGMLLNDHEVYVGPHLAK 213
Query: 195 QERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFV 252
++R + + FTNVYV N+ ++ L++ F FGTI+S + KD GKSR FGFV
Sbjct: 214 KDRQSKMRELIANFTNVYVKNINLNWDEDKLRETFSPFGTISSIFLSKDESGKSRGFGFV 273
Query: 253 NFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANL 312
NF+ + A AVE+LN + + YVGRAQK++ER L+ ++E R + K +G NL
Sbjct: 274 NFEKHEDAVKAVEELNNKDIDGQKLYVGRAQKKSERMESLKHQYEAARQEQLNKYQGYNL 333
Query: 313 YLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNG 372
++KNLDDSI+D KL+E F +GTITS KVM+D G SKG GF +S PEEAT+A+ EM+
Sbjct: 334 FVKNLDDSIDDAKLEEEFKPYGTITSAKVMLDDAGKSKGFGFVCYSSPEEATKAITEMHQ 393
Query: 373 KMIGRKPLYVAVAQRKEERKARL--------QAQFAQIRAPGGMSPLASGIPGYHHGAPR 424
+M+ KPLYVA+AQRKE R+++L Q + Q A GGM AP
Sbjct: 394 RMVAGKPLYVALAQRKEVRRSQLSQQIQARNQMRMQQAAAQGGMGQFV---------AP- 443
Query: 425 LGPQQLYYGQGTPGLMP------PQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQ 478
++YGQ PG +P P AA RPG +P V PGQ
Sbjct: 444 -----MFYGQ-NPGFLPPGARGAPFAAPGQQMMMQQGMPRPGQG---VP------VSPGQ 488
Query: 479 -RTGVRRSGNTHQMQ-----QPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMP 532
R G MQ PQ R Q RY R G
Sbjct: 489 FRVGPNGQPVPMYMQPVFNEYPQNGRLPQQ--RYYQGGRPGQQ----------------- 529
Query: 533 ATPVETPR------PVPVPISTLTSALASASPDDRTRMLGEQLYPLV----ENIEPVHAS 582
P PR VP +L L P+ + RMLGE+LYPL+ + +P A
Sbjct: 530 -PPQAGPRGKREDGAVP----SLAQVLPQFPPEQQKRMLGEELYPLIVATGKAQDPEAAG 584
Query: 583 KVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
K+TGM+LEMD ++L L+E + ++ EA++ +E
Sbjct: 585 KITGMMLEMDNQQILALLEDRDLFNSQFEEALSAYEE 621
>gi|383417507|gb|AFH31967.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|383417511|gb|AFH31969.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 459
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/379 (56%), Positives = 274/379 (72%), Gaps = 4/379 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM+ + G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMM-EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ 401
A+AQRKEER+A L Q+ Q
Sbjct: 366 ALAQRKEERQAHLTNQYMQ 384
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 166/299 (55%), Gaps = 25/299 (8%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ ++ +L+++++ LYD FS ++S +V D++ S GY +V++ + A
Sbjct: 96 SGVGNI--FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAA 151
Query: 83 ANAKEALNFMPINGKPIRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDTF 136
A E +N M +N + + + R+ + R + NV+IKN +D++ L D F
Sbjct: 152 ERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLF 211
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG LS KV D +G+SKG+GFV FE E AQ A+ +NG +N KQ+YVG ++ E
Sbjct: 212 GKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 197 RAQQNVSPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
R Q + KF N+YV NL + + DE L+K F FGTITSA VM +
Sbjct: 272 R-QTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG- 329
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
G+S+ FGFV F SP+ A AV ++NG K YV AQ++ ER+A L ++ Q S
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMAS 388
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|119612224|gb|EAW91818.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_d [Homo
sapiens]
Length = 472
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/379 (56%), Positives = 274/379 (72%), Gaps = 4/379 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM+ + G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 307 DERLRKEFSPFGTITSAKVMM-EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Query: 383 AVAQRKEERKARLQAQFAQ 401
A+AQRKEER+A L Q+ Q
Sbjct: 366 ALAQRKEERQAHLTNQYMQ 384
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 166/299 (55%), Gaps = 25/299 (8%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ ++ +L+++++ LYD FS ++S +V D++ S GY +V++ + A
Sbjct: 96 SGVGNI--FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAA 151
Query: 83 ANAKEALNFMPINGKPIRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDTF 136
A E +N M +N + + + R+ + R + NV+IKN +D++ L D F
Sbjct: 152 ERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLF 211
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG LS KV D +G+SKG+GFV FE E AQ A+ +NG +N KQ+YVG ++ E
Sbjct: 212 GKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 197 RAQQNVSPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
R Q + KF N+YV NL + + DE L+K F FGTITSA VM +
Sbjct: 272 R-QTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG- 329
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
G+S+ FGFV F SP+ A AV ++NG K YV AQ++ ER+A L ++ Q S
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMAS 388
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|393216848|gb|EJD02338.1| polyadenylate binding protein [Fomitiporia mediterranea MF3/22]
Length = 701
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/445 (49%), Positives = 301/445 (67%), Gaps = 18/445 (4%)
Query: 12 AVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGY 71
+V A+ A+ PS SLYVG+L+ V E+ L+++F+ + V S+RVCRD R SLGY
Sbjct: 44 SVPPASGASTPS----ASLYVGELDSTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGY 99
Query: 72 AYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
AYVNY N D A E LN+ I + RIM+S RDP++RK+G GN+FIKNLD ID+KA
Sbjct: 100 AYVNYLNAADGERALEQLNYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDHKA 159
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L DTFAAFG VLSCKVA D NG+S+G+GFV ++ EAA AIK +NGML+NDK+V+VG +
Sbjct: 160 LHDTFAAFGNVLSCKVATDENGRSRGFGFVHYDTAEAADTAIKAVNGMLLNDKKVFVGHY 219
Query: 192 VRRQERAQQNVS---PKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRC 248
+ ++ER Q ++ +FTN+YV NL VTD++ +F FG +TSA+V KD +GKS+
Sbjct: 220 ISKKER-QAHIDEQKSQFTNLYVKNLDTEVTDDEFNDMFAKFGEVTSAVVQKDEEGKSKG 278
Query: 249 FGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLK 308
FGFVNF+ ++A AAV+ L+ T N K +V RAQK+AERE +LR +EQ ++ + K +
Sbjct: 279 FGFVNFKDHESAQAAVDALHDTELNGKKLFVTRAQKKAEREEELRKSYEQAKMEKLSKYQ 338
Query: 309 GANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALN 368
GANLY+KNL+D ++D+KL+ F FGTITSCK+M D+ G SKG GF +S PEEAT+A+
Sbjct: 339 GANLYIKNLEDDMDDDKLRAEFEPFGTITSCKIMRDEKGTSKGFGFVCYSSPEEATKAVA 398
Query: 369 EMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQ 428
EMN KM+G KPLYV+ AQR+E R+ +L++Q A A+GIP + P P
Sbjct: 399 EMNNKMLGSKPLYVSPAQRREVRRQQLESQIAARNNFRMQQAAAAGIPNAYLNGPIYYPP 458
Query: 429 ----------QLYYGQGTPGLMPPQ 443
+ YG PG+MPP+
Sbjct: 459 GPGGYPQGRGMMGYGGPQPGIMPPR 483
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 62/112 (55%), Gaps = 17/112 (15%)
Query: 525 PFEVSGMPATPV----------ETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVE 574
P V G PATP + P+ P ALA+A+P R ++LGE LY +
Sbjct: 593 PAPVQGGPATPATGAEASAGEADVPQITP-------QALAAATPMQRKQLLGEALYMKIV 645
Query: 575 NIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDV 626
+E A K+TGMLLEM+ E++ L++S EAL KV EA+AVL + A + V
Sbjct: 646 LMEEELAGKITGMLLEMEDDELMGLLDSQEALTGKVNEAIAVLNDFAVKESV 697
>gi|444706057|gb|ELW47419.1| Polyadenylate-binding protein 1 [Tupaia chinensis]
Length = 636
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 261/587 (44%), Positives = 353/587 (60%), Gaps = 56/587 (9%)
Query: 82 AANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGT 141
A A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG
Sbjct: 65 AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 124
Query: 142 VLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ- 200
+LSCKV D NG SKGYGFV FE +EAA+ + +NGML+ND++V+VG F R+ER +
Sbjct: 125 ILSCKVVCDENG-SKGYGFVHFETQEAAERVSEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 201 -NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDA 259
+ +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ +
Sbjct: 184 GARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHED 243
Query: 260 AAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDD 319
A AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KP
Sbjct: 304 GIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362
Query: 380 LYVAVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGA 422
LYVA+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 363 LYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRA 420
Query: 423 PRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQ 478
P Q+ + +P A + FQ PG +RP P P+ R P
Sbjct: 421 AYYPPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRV 476
Query: 479 RTGVRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEV 528
+ R + + Q P+ +R Q +Y RN Q + + V +
Sbjct: 477 MSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRN-PQQHLNAQPQVTMQ- 533
Query: 529 SGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGML 588
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGML
Sbjct: 534 --QPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGML 585
Query: 589 LEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
LE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 586 LEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 632
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 110/205 (53%), Gaps = 25/205 (12%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + +++++ +L DLF + +SV+V D+S +S G+ +V++ +DA A +
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 249
Query: 88 ALNFMPINGKPIRIMYSHR-----------------DPSIRKSGYGNVFIKNLDTSIDNK 130
+N +NGK I + + + D R G N+++KNLD ID++
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDE 308
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L F+ FGT+ S KV ++ G+SKG+GFV F + E A A+ +NG ++ K +YV L
Sbjct: 309 RLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 367
Query: 191 FVRRQERAQQNVSPKFTNVYVNNLA 215
R++ER TN Y+ +A
Sbjct: 368 AQRKEERQAH-----LTNQYMQRMA 387
>gi|119612222|gb|EAW91816.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
gi|119612227|gb|EAW91821.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
Length = 419
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/384 (56%), Positives = 277/384 (72%), Gaps = 5/384 (1%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
+ PS Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P
Sbjct: 4 SAPS-YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+
Sbjct: 182 ELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
+ A AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNL
Sbjct: 242 EDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNL 301
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
DD I+DE+L++ FS FGTITS KVM+ + G SKG GF FS PEEAT+A+ EMNG+++
Sbjct: 302 DDGIDDERLRKEFSPFGTITSAKVMM-EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 378 KPLYVAVAQRKEERKARLQAQFAQ 401
KPLYVA+AQRKEER+A L Q+ Q
Sbjct: 361 KPLYVALAQRKEERQAHLTNQYMQ 384
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 166/299 (55%), Gaps = 25/299 (8%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ ++ +L+++++ LYD FS ++S +V D++ S GY +V++ + A
Sbjct: 96 SGVGNI--FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAA 151
Query: 83 ANAKEALNFMPINGKPIRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDTF 136
A E +N M +N + + + R+ + R + NV+IKN +D++ L D F
Sbjct: 152 ERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLF 211
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG LS KV D +G+SKG+GFV FE E AQ A+ +NG +N KQ+YVG ++ E
Sbjct: 212 GKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 197 RAQQNVSPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
R Q + KF N+YV NL + + DE L+K F FGTITSA VM +
Sbjct: 272 R-QTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG- 329
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
G+S+ FGFV F SP+ A AV ++NG K YV AQ++ ER+A L ++ Q S
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMAS 388
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
>gi|344257059|gb|EGW13163.1| Polyadenylate-binding protein 1 [Cricetulus griseus]
Length = 565
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 257/581 (44%), Positives = 345/581 (59%), Gaps = 56/581 (9%)
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LSCKV
Sbjct: 1 MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVV 60
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER + + +F
Sbjct: 61 CDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEF 119
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A AV++
Sbjct: 120 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 179
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
+NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+DE+L
Sbjct: 180 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 239
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KP YVA+AQ
Sbjct: 240 RKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPFYVALAQ 298
Query: 387 RKEERKARLQAQFAQIRAPGGMSP---------------LASGIPGYHHGAPRLGPQQLY 431
RKEER+A L Q Q A P + IP + A P Q+
Sbjct: 299 RKEERQAHLTNQHMQRMASVQAVPNPVINPYQPAPPSGYFMAAIPQTQNRAAYYPPSQIA 358
Query: 432 YGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTGVRRSGN 487
+ +P A + FQ PG +RP P P+ R P + R +
Sbjct: 359 QLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMSTQRVANT 414
Query: 488 THQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFEVSGMPA 533
+ Q P+ +R Q +Y RN Q V+M PA
Sbjct: 415 STQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM--------QQPA 465
Query: 534 TPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQ 593
V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGMLLE+D
Sbjct: 466 VHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDN 519
Query: 594 TEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
+E+LH++ESPE+L++KV EA+AVLQ A+ + + S A
Sbjct: 520 SELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSAA 560
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 103/187 (55%), Gaps = 20/187 (10%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + +++++ +L DLF + +SV+V D+S +S G+ +V++ +DA A +
Sbjct: 120 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 178
Query: 88 ALNFMPINGKPIRIMYSHR-----------------DPSIRKSGYGNVFIKNLDTSIDNK 130
+N +NGK I + + + D R G N+++KNLD ID++
Sbjct: 179 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDE 237
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L F+ FGT+ S KV ++ G+SKG+GFV F + E A A+ +NG ++ K YV L
Sbjct: 238 RLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPFYVAL 296
Query: 191 FVRRQER 197
R++ER
Sbjct: 297 AQRKEER 303
>gi|281212216|gb|EFA86376.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 562
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 253/601 (42%), Positives = 349/601 (58%), Gaps = 62/601 (10%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ + SLYVGDL +V+ES L+++F+QV V ++R+CRD + R SL YAY+NY N DA
Sbjct: 5 FSSSSLYVGDLHPDVSESHLFEVFNQVGPVANLRICRDNTTRRSLSYAYINYHNSTDAER 64
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + LN PI GK RIM+S RDPS+RKSG GN+FIKNLD ++D+KAL DTF+AFG +LS
Sbjct: 65 ALDTLNNTPIKGKACRIMWSQRDPSLRKSGIGNIFIKNLDKTVDHKALYDTFSAFGNILS 124
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER-AQQNVS 203
CKV D SKG+GFV +E++E+A+ AI +NGM+IN+++V+VG F +ER A Q V
Sbjct: 125 CKVVTDETNTSKGFGFVHYESQESAEKAIAKVNGMMINNQKVFVGPFKSSKERGATQEV- 183
Query: 204 PKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAA 263
K+TNV++ NL+E V+++ L + G IT+ +M D GKS+ FGF NF+ DAA A
Sbjct: 184 -KYTNVFIKNLSEDVSEQQLTDLLQAHGKITNLCIMTDEKGKSKGFGFANFEHADAAKGA 242
Query: 264 VEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIND 323
VE NG + KV YVGRAQK+ EREA+L+ KFE K +G NLY+KNLDDSI+
Sbjct: 243 VENENGKMFSGKVIYVGRAQKKLEREAELKHKFE-------TKYQGVNLYIKNLDDSIDS 295
Query: 324 EKLKELFSEFGTITSCKVMVDQHG-FSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
+KL+ FS +GTITS KVM D G SKG GF +S P+EA++A+ EM+G+M+G KPLYV
Sbjct: 296 DKLRATFSAYGTITSSKVMRDDKGSSSKGFGFVCYSTPDEASKAVAEMHGRMVGSKPLYV 355
Query: 383 AVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPP 442
A AQRK+ R+A+L+AQ + + + R+ Q +Y PP
Sbjct: 356 AFAQRKDVRRAQLEAQHTKFK------------------SSRMPVQSIY---------PP 388
Query: 443 QAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQ 502
+ +P P G + P + R G V + G MQ +RN
Sbjct: 389 TGPIF------YP---PAGMPVVYPQMIPRPPRAGWNGPVPQQGQYPPMQGQYPIRNPRG 439
Query: 503 GIRYLDNARNGTDQSVVSMVPVPFEVSGMPAT--PVE---TPRPVPVPISTLTSALASAS 557
G+ N RN P P PA P+ P V + + S
Sbjct: 440 GVPPTGNHRNQ---------PRPRPDGQQPAAQQPIAQQLIAEPQAVQPEVTLATVQSMP 490
Query: 558 PDDRTRMLGEQLYPLVENIEPVHASKVTGMLLE-MDQTEVLHLIESPEALKTKVAEAMAV 616
+ + LGE LYPL+ +P + K+TGMLL+ + E+ L + E L K+ EA+ V
Sbjct: 491 REQQNSFLGELLYPLIHASQPDLSGKITGMLLDSLTVEELFTLYQRTELLADKIKEALDV 550
Query: 617 L 617
L
Sbjct: 551 L 551
>gi|302683360|ref|XP_003031361.1| hypothetical protein SCHCODRAFT_257452 [Schizophyllum commune H4-8]
gi|300105053|gb|EFI96458.1| hypothetical protein SCHCODRAFT_257452 [Schizophyllum commune H4-8]
Length = 624
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/398 (52%), Positives = 282/398 (70%), Gaps = 11/398 (2%)
Query: 6 AAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSK 65
A+A T +AT+A SLYVG+L+ V ES L+++F+ + V S+RVCRD
Sbjct: 29 ASAPTHGANTATSA---------SLYVGELDPTVTESMLFEIFNMIGPVASIRVCRDAVT 79
Query: 66 RSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDT 125
R SLGYAYVNY N D A E LN+ I +P RIM+S RDP++RK+G GN+FIKNLD
Sbjct: 80 RRSLGYAYVNYLNAADGERALEQLNYSSIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDE 139
Query: 126 SIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQ 185
IDNKAL DTFAAFG VLSCKVA D +G SKGYGFV +E EAA+NAIK +NGML+NDK+
Sbjct: 140 QIDNKALHDTFAAFGNVLSCKVATDEHGNSKGYGFVHYETAEAAENAIKSVNGMLLNDKK 199
Query: 186 VYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
VYVG + R+ER + + FTN+YV N+ VTDE+ + +F +G + S+++ +D
Sbjct: 200 VYVGPHISRKERQSKIDEMRAHFTNLYVKNIDPEVTDEEFENLFKQYGQVQSSLLKRDDQ 259
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
G++ FGFVNF++ + A AV+ L+ + + + YV RAQK+AEREA+LR +++Q R R
Sbjct: 260 GRNLGFGFVNFETHEEAQKAVDALHESDFHGRKLYVARAQKKAEREAELRKQYDQARQER 319
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEA 363
K +G NLY+KNL+D ++DEKL+ F FGTITSC+VM D+ G SKG GF +S P+EA
Sbjct: 320 MNKYQGVNLYIKNLEDDVDDEKLRAEFEPFGTITSCRVMRDERGKSKGFGFVCYSAPDEA 379
Query: 364 TRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ 401
T+A+ EMN KMIG KPLYV++AQRKE R+ +L++Q AQ
Sbjct: 380 TKAVAEMNNKMIGSKPLYVSLAQRKEIRRQQLESQIAQ 417
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 49/69 (71%)
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
+A S SP ++ +MLGE +Y + +P A K+TGMLLEMD E+L L++SPEAL KV
Sbjct: 553 AAFNSVSPMEQKQMLGEVIYIKIAPQQPELAGKITGMLLEMDNQELLTLLDSPEALTGKV 612
Query: 611 AEAMAVLQE 619
EA++VLQ+
Sbjct: 613 NEALSVLQD 621
>gi|126137970|ref|XP_001385508.1| Polyadenylate-binding protein, cytoplasmic and nuclear
(Poly(A)-binding protein) (PABP) (ARS consensus binding
protein ACBP-67) (Polyadenylate tail-binding protein)
[Scheffersomyces stipitis CBS 6054]
gi|158513407|sp|A3LXL0.1|PABP_PICST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|126092786|gb|ABN67479.1| Polyadenylate-binding protein, cytoplasmic and nuclear
(Poly(A)-binding protein) (PABP) (ARS consensus binding
protein ACBP-67) (Polyadenylate tail-binding protein)
[Scheffersomyces stipitis CBS 6054]
Length = 632
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 264/640 (41%), Positives = 367/640 (57%), Gaps = 90/640 (14%)
Query: 5 GAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQS 64
G A +A + +TA SLYVG+L +VNE+ L+++FS + QV S+RVCRD
Sbjct: 38 GEEGADSANVAESTA---------SLYVGELNTSVNEATLFEIFSPIGQVSSIRVCRDAV 88
Query: 65 KRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLD 124
+ SLGYAYVNY +D A E LN+ PI G+P RIM+S RDPS R+SG GN+FIKNL
Sbjct: 89 SKKSLGYAYVNYHKMEDGEKAIEELNYSPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLH 148
Query: 125 TSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDK 184
+IDNKAL DTF+ FG +LSCKVA D GQSK +GFV +E EAA+ AI+ +NGML+ND+
Sbjct: 149 PAIDNKALHDTFSTFGKILSCKVATDDMGQSKCFGFVHYETAEAAEAAIENVNGMLLNDR 208
Query: 185 QVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
+V+VG + +++R + + FTN+YV N+ ++EDLKK+F +G ITS + KD+
Sbjct: 209 EVFVGKHISKKDRESKFEEIKANFTNIYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKDA 268
Query: 243 DGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
+GKS+ FGFVN++ +AA AVE+LN N + YVGRAQK+ ER +L+ ++E R+
Sbjct: 269 EGKSKGFGFVNYEGHEAAVKAVEELNDKEINGQKIYVGRAQKKRERMEELKKQYENTRLE 328
Query: 303 RYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEE 362
+ K +G NL++KNLDD+I+ EKL+E F FGTITS +VMVD+ G SKG GF FS PEE
Sbjct: 329 KLSKYQGVNLFIKNLDDTIDSEKLEEEFKPFGTITSARVMVDETGKSKGFGFVCFSSPEE 388
Query: 363 ATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFA---QIR-----APGGMS----- 409
AT+A+ EMN +M KPLYVA+AQRK+ R+++L+ Q Q+R A GG+
Sbjct: 389 ATKAITEMNQRMFFGKPLYVALAQRKDVRRSQLEQQIQARNQMRMQNAAATGGIPGQFIP 448
Query: 410 PLASGIPGY-----HHGAPRLGPQ-QLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPN 463
P+ G G+ AP GP Q+ +G P P Q +P RPG
Sbjct: 449 PMFYGQQGFFPPNGRGNAPFPGPNPQMIMRRGQPFGGPEQ----------WP--RPGPNG 496
Query: 464 YIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVP 523
+P + P Q N Q + RN N+G + D
Sbjct: 497 QPVPVY----GIPPQAYSDFNGQNIRQQRGYYPNRNQNKGRQQRD--------------- 537
Query: 524 VPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLV----ENIEPV 579
L + +ASA PD + R+LGE+LYP + + EP
Sbjct: 538 -------------------------LAAIIASAPPDQQKRILGEELYPKIVATGKAQEPE 572
Query: 580 HASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
A K+TGM+L++D E+L L+E E +A+ +E
Sbjct: 573 AAGKITGMMLDLDNQEILALLEDDELFTNHFEDALTAFEE 612
>gi|17567133|ref|NP_510260.1| Protein PAB-2, isoform a [Caenorhabditis elegans]
gi|3876085|emb|CAA90444.1| Protein PAB-2, isoform a [Caenorhabditis elegans]
Length = 692
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 237/479 (49%), Positives = 308/479 (64%), Gaps = 44/479 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLY+GDL +V+E+ L++ FS V+S+RVCRD + R SLGYAYVN+ P DA
Sbjct: 54 YSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAER 113
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I+G+P+RIM+S RDP+ R++G GN+FIKNLD IDNK++ DTF+ FG +LS
Sbjct: 114 ALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILS 173
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKVA D G SKGYGFV FE E +AQ AI+ +NGML++DK+VYVG F R +R ++
Sbjct: 174 CKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGES 233
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
K+TNV+V N E + E L +F FG ITSA+VM D+ GK + FGFV F DAA
Sbjct: 234 GLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQ 293
Query: 263 AVEKLNGTT--NNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNL 317
AVEKLN + D V RAQK++ER A+L+ K+E QER+ RY+ G NLY+KN+
Sbjct: 294 AVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQ---GVNLYVKNI 350
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
++ +ND+ L++ FS FGTITS KVMVD++G SKG GF F PEEAT A+ +MN KMIG
Sbjct: 351 EEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMNSKMIGA 410
Query: 378 KPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPG----YHHGAPRLGPQQLYY- 432
KPLYVA+AQRKE+R+A+L +Q+ Q A M ASG+P Y G QQ Y+
Sbjct: 411 KPLYVALAQRKEDRRAQLASQYMQRLATLRMGQQASGVPAMTQLYQPG------QQGYFV 464
Query: 433 -----GQGTPGLMPPQAAGYG------FQQQVFPGLRPGGPNYIMPYHL-QRQVHPGQR 479
QG PG P A G FQ Q+F M Y QRQV+P Q+
Sbjct: 465 PNPMNAQGRPGFQPQSAQIRGPPGQRVFQNQMF-----------MQYPFNQRQVYPQQQ 512
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Query: 548 TLTS-ALASASPDDRTRMLGEQLYPLVENIEPVH--ASKVTGMLLEMDQTEVLHLIESPE 604
TLTS LA A+P ++ ++LGE++Y L+E + P H A K+TGM+LE+D E++ +++ E
Sbjct: 603 TLTSHMLAQAAPQEQKQLLGERIYALIEKMFPNHKEAGKITGMMLEIDNAELIMMLQDAE 662
Query: 605 ALKTKVAEAMAVL 617
++KV EA VL
Sbjct: 663 LFRSKVEEAFGVL 675
>gi|126342235|ref|XP_001367420.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 635
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/379 (55%), Positives = 271/379 (71%), Gaps = 4/379 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL V+E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPTASLYVGDLHPEVSEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A E +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALETMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALFDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D +G SKGYGFV FE +AA+ AI +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDEHG-SKGYGFVHFETRDAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + D LK++FG FG S VM D G S+ FGFVNF+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDLRLKRLFGKFGPSLSVKVMTDESGTSKGFGFVNFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AVE++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVEEMNGKELNGKKIYVGRAQKKGERQTELKRKFEQLKQDRITRYQGVNLYVKNLDDGID 306
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G +KG GF FS PEEAT+A+ EMNG+++ KPLY+
Sbjct: 307 DERLRKEFSPFGTITSAKVMME-GGRNKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYI 365
Query: 383 AVAQRKEERKARLQAQFAQ 401
A+AQRKEER+A L Q+ Q
Sbjct: 366 ALAQRKEERQAHLTNQYMQ 384
>gi|429859146|gb|ELA33937.1| polyadenylate-binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 688
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 274/678 (40%), Positives = 374/678 (55%), Gaps = 103/678 (15%)
Query: 1 MEATGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVC 60
+EA G A A T T P + SLYVG+L+ +V E+ L++LFSQ+ V S+R
Sbjct: 36 VEAQGDNADAAGPTPTT---APHPQASASLYVGELDPSVTEAMLFELFSQIGSVASIR-- 90
Query: 61 RDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFI 120
A E LN+ I G+P RIM+S RDP++RK+G GNVFI
Sbjct: 91 ------------------------ALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFI 126
Query: 121 KNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGML 180
KNLD +IDNKAL DTFAAFG +LSCKVA D NG SKGYGFV +E +EAA AIK +NGML
Sbjct: 127 KNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGML 186
Query: 181 INDKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
+N+K+VYVG + +++R + + FTNVYV N+A VTD++ + +F FG +TS+ +
Sbjct: 187 LNEKKVYVGHHIPKKDRQSKFEEMKANFTNVYVKNIANEVTDDEFRDLFAAFGDVTSSSL 246
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+D +GKSR FGFVNF + +AAA AVE LN + YVGRAQK+ ERE +LR +E
Sbjct: 247 ARDQEGKSRGFGFVNFTTHEAAAKAVEDLNNKDFRGQDLYVGRAQKKHEREEELRKSYEA 306
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ------------- 345
R+ + K +G NLY+KNLDD ++DEKL+ LF++FG ITS KVM D
Sbjct: 307 ARLEKANKYQGVNLYIKNLDDEVDDEKLRTLFADFGPITSAKVMRDTPTDSKEDEEGSSE 366
Query: 346 -------------------------------HGFSKGSGFAAFSMPEEATRALNEMNGKM 374
HG SKG GF FS P++AT+A+ EMN +M
Sbjct: 367 EKEKENKPEAEEKTEEKEGSEKKEKKSDKKLHGKSKGFGFVCFSNPDDATKAVAEMNQRM 426
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRL--GPQQLYY 432
+ KPLYVA+AQRK+ RK++L+ A I+A ++ A+G+P + P G QQ +
Sbjct: 427 VHGKPLYVALAQRKDVRKSQLE---ASIQARNQLAAAAAGLPQQYMQPPVFYAGGQQPVF 483
Query: 433 GQGTPGLMPPQ-----AAGYGFQQQVFPGLRP-----GGPNYIMP-YHLQRQVHPGQRTG 481
QG G+ PQ A G + FPG P G P + P Y + Q PG
Sbjct: 484 PQGGRGMPFPQPGMPMPAVQGGRPGQFPGGYPQQGGRGVPQQMPPVYGMPGQFPPG--AP 541
Query: 482 VRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRP 541
SGN PQF+ QG R + P P G A P +
Sbjct: 542 YPNSGN------PQFLAAIQQGGNQPGAGRGANPNGPRNNAPFP--QGGRGAAPAQDLNS 593
Query: 542 VPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIE 601
+ L+S A+ +P + ++LGE ++P ++ ++P A K+TGMLLEM+ E+++LIE
Sbjct: 594 SSLIQQQLSS--AAGNPGQQKQILGEVIFPKIQAMQPELAGKITGMLLEMENAELVNLIE 651
Query: 602 SPEALKTKVAEAMAVLQE 619
ALK KV EA+ V +E
Sbjct: 652 DESALKAKVDEALGVYEE 669
>gi|159462882|ref|XP_001689671.1| polyadenylate-binding protein RB47 [Chlamydomonas reinhardtii]
gi|158283659|gb|EDP09409.1| polyadenylate-binding protein RB47 [Chlamydomonas reinhardtii]
Length = 636
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/406 (54%), Positives = 280/406 (68%), Gaps = 7/406 (1%)
Query: 7 AAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKR 66
A ++ +ATT + N SLYVGDLE++V E+QL++LFS V V S+RVCRD R
Sbjct: 2 ATTESSAPAATTQPASTPLANSSLYVGDLEKDVTEAQLFELFSSVGPVASIRVCRDAVTR 61
Query: 67 SSLGYAYVNYS---NPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
SLGYAYVNY+ +PQ A A E LN+ +NGKP+RIM+SHRDPS RKSG GN+FIKNL
Sbjct: 62 RSLGYAYVNYNSALDPQAADRAMETLNYHVVNGKPMRIMWSHRDPSARKSGVGNIFIKNL 121
Query: 124 DTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND 183
D +ID KAL DTF+AFG +LSCKVA D+NG SKGYGFV FE++ AA AI+ +N I
Sbjct: 122 DKTIDAKALHDTFSAFGKILSCKVATDANGVSKGYGFVHFEDQAAADRAIQTVNQKEIEG 181
Query: 184 KQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
K VYVG F +R +R Q +TNV+V NL + D++L K+ G ITSA+VMKD
Sbjct: 182 KIVYVGPFQKRADRPQD----VYTNVFVKNLPADIGDDELGKMATEHGEITSAVVMKDDK 237
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
G S+ FGF+NF+ ++AA VE LN + K Y GRAQK+ EREA LR K E+ + R
Sbjct: 238 GGSKGFGFINFKDAESAAKCVEYLNEREMSGKTLYAGRAQKKTEREAMLRQKAEESKQER 297
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEA 363
Y K +G NLY+KNL D ++D+ L+ELF+ GTITSCKVM D G SKG GF F+ +EA
Sbjct: 298 YLKYQGMNLYVKNLSDEVDDDALRELFANSGTITSCKVMKDGSGKSKGFGFVCFTSHDEA 357
Query: 364 TRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMS 409
TRA+ EMNGKM+ KPLYVA+AQRK+ R+A+L+A G MS
Sbjct: 358 TRAVTEMNGKMVKGKPLYVALAQRKDVRRAQLEANMQARMGMGAMS 403
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 558 PDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVL 617
P+ + M+GE+LYP V ++P A K+TGMLLEMD E+L L+ES EAL +KV EA+AVL
Sbjct: 565 PEQQKMMIGERLYPQVAELQPDLAGKITGMLLEMDNAELLMLLESHEALVSKVDEAIAVL 624
Query: 618 QE 619
++
Sbjct: 625 KQ 626
>gi|194386544|dbj|BAG61082.1| unnamed protein product [Homo sapiens]
Length = 604
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 269/648 (41%), Positives = 362/648 (55%), Gaps = 96/648 (14%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSG------------------------------ 97
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
V D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 98 --VVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 154
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 155 AKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 214
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 215 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 274
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 275 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 333
Query: 383 AVAQRKEERKARLQAQFAQIRA-----------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L Q+ Q A P G + IP + A
Sbjct: 334 ALAQRKEERQAHLTNQYMQRMASVQAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYY 391
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTG 481
P Q+ + +P A + FQ PG +RP P P+ R P +
Sbjct: 392 PPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMST 447
Query: 482 VRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFE 527
R + + Q P+ +R Q +Y RN Q V+M
Sbjct: 448 QRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM------ 500
Query: 528 VSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGM
Sbjct: 501 --QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGM 552
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
LLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 553 LLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 600
>gi|302693014|ref|XP_003036186.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
gi|300109882|gb|EFJ01284.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
Length = 632
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/406 (52%), Positives = 284/406 (69%), Gaps = 6/406 (1%)
Query: 18 TAAVPSGYGN---VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYV 74
+A V +G G+ SLYVG+L+ V E+ L+++F+ + V S+RVCRD R SLGYAYV
Sbjct: 33 SAPVSTGAGSPPSASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYV 92
Query: 75 NYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCD 134
NY N D A E LN+ I +P RIM+S RDP++RK+G GN+FIKNLD IDNKAL D
Sbjct: 93 NYLNAADGERALEQLNYSLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHD 152
Query: 135 TFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRR 194
TFAAFG VLSCKVA D +G SKGYGFV +E EAA+NAIK +NGML+NDK+VYVG + R
Sbjct: 153 TFAAFGNVLSCKVATDEHGNSKGYGFVHYETAEAAENAIKNVNGMLLNDKKVYVGHHISR 212
Query: 195 QERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFV 252
+ER + + +FTN+Y+ N+ VTDE+ + +F G +TS+++ +D +G+SR FGFV
Sbjct: 213 KERQSKIDEMKAQFTNLYIKNIDPEVTDEEFEALFREQGNVTSSVIQRDEEGRSRGFGFV 272
Query: 253 NFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANL 312
N+++ + A AV+ LN + + +V RAQK+AERE +LR EQ R+ + K +G NL
Sbjct: 273 NYETHEEAQKAVDNLNDKDFHGRKLFVSRAQKKAEREEELRKAHEQARLEKLSKYQGLNL 332
Query: 313 YLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNG 372
Y+KNLDD ++DEKL+ F FGTITS KVM D G SKG GF +S PEEA++A+ EMN
Sbjct: 333 YVKNLDDDVDDEKLRAEFEPFGTITSAKVMRDDKGVSKGFGFVCYSSPEEASKAVAEMNN 392
Query: 373 KMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGY 418
KMIG KPLYV+ AQR+E R+ +L++Q AQ R A G+PGY
Sbjct: 393 KMIGSKPLYVSHAQRREVRRQQLESQIAQ-RNQIMHQAAAGGMPGY 437
>gi|393245425|gb|EJD52935.1| polyadenylate binding protein [Auricularia delicata TFB-10046 SS5]
Length = 665
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/375 (55%), Positives = 273/375 (72%), Gaps = 2/375 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVG+L+ +V E+ L+++F+ + V S+RVCRD R SLGYAYVNY N D A +
Sbjct: 48 SLYVGELDPSVTEAMLFEVFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALDQ 107
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LN+ I + RIM+S RDP++RK+G GN+FIKNLD IDNKAL DTFAAFG VLSCKVA
Sbjct: 108 LNYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVA 167
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D +G SKGYGFV +E EAA+NAIK +NGML+NDK+V+VG + R+ER + + ++
Sbjct: 168 TDEHGNSKGYGFVHYETAEAAENAIKSVNGMLLNDKKVFVGHHIPRKERQSKIDEMKAQY 227
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TN+YV NL + E +++FG FG ITSA + KD +GKSR FGFVNF+S + AAAAVE
Sbjct: 228 TNIYVKNLDPELGQEGFEELFGKFGNITSAALSKDEEGKSRGFGFVNFESHEQAAAAVET 287
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
L+ T N + YV RAQK++ERE +LR +E + + K +G NLY+KNL+D I+DEKL
Sbjct: 288 LHDTEINGRKLYVARAQKKSEREDELRKSYENAKQEKLSKYQGVNLYIKNLEDDIDDEKL 347
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
+ F FGTITSCKVM D+ SKG GF FS P+EAT+A++EMN KMIG KPLYV++AQ
Sbjct: 348 RAEFEPFGTITSCKVMRDEKNTSKGFGFVCFSSPDEATKAVSEMNNKMIGSKPLYVSLAQ 407
Query: 387 RKEERKARLQAQFAQ 401
R+E R+ +L+ Q AQ
Sbjct: 408 RREVRRQQLETQIAQ 422
>gi|344228406|gb|EGV60292.1| hypothetical protein CANTEDRAFT_136776 [Candida tenuis ATCC 10573]
Length = 647
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 264/633 (41%), Positives = 369/633 (58%), Gaps = 36/633 (5%)
Query: 2 EATGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCR 61
E+T + T TSA A G + SLYVG+L +VNE+ L+++FS + QV S+RVCR
Sbjct: 26 ESTEQSKETTTETSAP-AKENLGETSASLYVGELNTSVNEALLFEIFSPIGQVSSIRVCR 84
Query: 62 DQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIK 121
D + SLGYAYVN+ D A E LN+ I G+P RIM+S RDPS+R++G GN+FIK
Sbjct: 85 DAVTKKSLGYAYVNFVKFDDGEQAIEDLNYSLIEGRPCRIMWSQRDPSLRRNGEGNIFIK 144
Query: 122 NLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLI 181
NL +IDNKAL DTF+AFG +LSCKVA D G SK +GFV +E EAA+ AI+ +NGML+
Sbjct: 145 NLHPAIDNKALHDTFSAFGRILSCKVATDELGNSKCFGFVHYETAEAAEAAIENVNGMLL 204
Query: 182 NDKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVM 239
ND++V+VG V +++R + + FTNV+V NLA TD++LK++F +G ITS+ +
Sbjct: 205 NDREVFVGKHVSKKDRESKFEEMKANFTNVFVKNLAPEYTDQELKELFSAYGPITSSYLE 264
Query: 240 KDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQE 299
KD +GKS+ FGFVNF + + A AV++LN + YVGRAQK+ ER +LR ++E
Sbjct: 265 KDLEGKSKGFGFVNFDNHNDAVKAVDELNNKEIAGQPIYVGRAQKKRERMEELRRQYEAT 324
Query: 300 RISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSM 359
++ + K +G NL++KNLDD+I+ EKL+ F FG ITS +VMVD+ G SKG GF FS
Sbjct: 325 KLEKLSKYQGVNLFIKNLDDTIDSEKLENEFKPFGNITSARVMVDEQGKSKGFGFVCFSS 384
Query: 360 PEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYH 419
PEEAT+A+ EMN +M+ KPLYVA+AQRK+ R+++L+ Q Q R M A+
Sbjct: 385 PEEATKAITEMNQRMVEGKPLYVALAQRKDVRRSQLEQQI-QARNQMRMQNAAAAAAAAG 443
Query: 420 HGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPY---HLQRQVHP 476
P ++YGQ PG PP A G RP G N P + Q+
Sbjct: 444 GAIPGQFMNPMFYGQ-QPGFFPPPGANGG---------RPNGANGAGPNAGPNANPQMMM 493
Query: 477 GQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPF------EVSG 530
R G Q+ PQ G + NG V +P + + G
Sbjct: 494 AAAAAAARGG---QIPPPQ------AGAGWGRPNPNGQQIPPVYGMPPVYQNGPNGQPRG 544
Query: 531 MPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENI----EPVHASKVTG 586
PA + P P L + L+S P+ + R+LGE+LYP + + EP A K+TG
Sbjct: 545 APAPGMYPPNGRPTKARDLAAILSSVPPEQQKRILGEELYPKIVSTGRANEPEAAGKITG 604
Query: 587 MLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
M+L++D E+L L+E E +A+ +E
Sbjct: 605 MMLDLDNQEILSLLEDDELFNNHFEDALTAYEE 637
>gi|449547299|gb|EMD38267.1| hypothetical protein CERSUDRAFT_113433 [Ceriporiopsis subvermispora
B]
Length = 679
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/432 (50%), Positives = 289/432 (66%), Gaps = 27/432 (6%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
LYVG+L+ V E+ L+++F+ + V S+RVCRD R SLGYAYVNY N D A E L
Sbjct: 50 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQL 109
Query: 90 NFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAI 149
N+ I G+ RIM+S RDP++RK+G GN+FIKNLD IDNKAL DTFAAFG VLSCKVA
Sbjct: 110 NYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDEGIDNKALHDTFAAFGNVLSCKVAT 169
Query: 150 DSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSPKFT 207
D +G+SKGYGFV +E EAA AIK +NGML+NDK+VYVG + R+ER + + +FT
Sbjct: 170 DEHGRSKGYGFVHYETAEAADTAIKAVNGMLLNDKKVYVGPHISRKERQSKIEEMKAQFT 229
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NVYV N+ VTDE+ +++F FG +TSA++ +D +G+S+ FGFVNF+ + A VE L
Sbjct: 230 NVYVKNIDAEVTDEEFRQLFEQFGNVTSAVIQRDEEGRSKGFGFVNFEKHEEAQKGVESL 289
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
+ N K +V RAQK+AERE +LR +EQ + + K +G NLY+KNL+D ++DE+L+
Sbjct: 290 HDFELNGKKLFVTRAQKKAEREEELRKSYEQAKNEKLSKYQGVNLYIKNLEDEVDDERLR 349
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
+ F FGTITS KVM D+ G SKG GF FS P+EAT+A+ EMN KMIG KPLYV++AQR
Sbjct: 350 QEFEPFGTITSAKVMRDEKGSSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLAQR 409
Query: 388 KEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYY--------------- 432
+E R+ +L++Q AQ +G GY +G LYY
Sbjct: 410 REVRRQQLESQIAQRNQIRMQQAAVAG--GYINGP-------LYYPPGPGGFPPQGGRGM 460
Query: 433 -GQGTPGLMPPQ 443
G G PG++PP+
Sbjct: 461 MGYGQPGMLPPR 472
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y V+LY+ +LE V++ +L F + S +V RD+ K SS G+ +V +S+P +A
Sbjct: 327 SKYQGVNLYIKNLEDEVDDERLRQEFEPFGTITSAKVMRDE-KGSSKGFGFVCFSSPDEA 385
Query: 83 ANAKEALNFMPINGKPIRIMYSHR 106
A +N I KP+ + + R
Sbjct: 386 TKAVAEMNNKMIGTKPLYVSLAQR 409
>gi|399217460|emb|CCF74347.1| unnamed protein product [Babesia microti strain RI]
Length = 679
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 270/660 (40%), Positives = 360/660 (54%), Gaps = 83/660 (12%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ + SLYVGDL V E+ LY++F+ + V S+RVCRD R SLGYAYVNY N DA
Sbjct: 38 FPSASLYVGDLSPEVTEAILYEIFNTIGPVASIRVCRDSITRKSLGYAYVNYHNVNDARR 97
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A EAL + I GK +RIM+SHRDPS+RKSG GNVFIKN+D SID KAL D F+ +G +LS
Sbjct: 98 ALEALKYNEICGKQVRIMWSHRDPSLRKSGAGNVFIKNIDESIDTKALYDAFSPYGQILS 157
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA-----Q 199
CKVA D G+S+GYGFV F+ E A AI NGM + +K+++V FVRR ER +
Sbjct: 158 CKVATDETGRSRGYGFVHFDTEANATRAISDANGMQLGNKKIFVAPFVRRSERVSSTKLE 217
Query: 200 QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDA 259
V KFTN+YV N E +E LK+ F FG ITS +M SD R F F+N+
Sbjct: 218 DGVDEKFTNLYVRNFPENWNEEILKENFSPFGEITS--MMMKSDPLGRKFAFINYAENSM 275
Query: 260 AAAAVEKLNG-----------------TTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
A AA+E +NG T ++ V Q RA R A L+AK++
Sbjct: 276 AKAAIETMNGKDFSIKSGDKSTIEGEDTDKSETKLLVCAHQDRARRHAMLKAKYDSMHAE 335
Query: 303 RYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEE 362
K +G NLY+KNLDDSIND +L+ELF FG ITSCKVMVD+HG S G GF F PE+
Sbjct: 336 NKSKYQGVNLYIKNLDDSINDAELRELFEGFGLITSCKVMVDEHGASLGFGFVCFVSPED 395
Query: 363 ATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFA----QIRAPGGMSPLASGIPGY 418
AT A++EM+ K++ KPLYV +A+++E+R RLQ ++ + P GM P +P
Sbjct: 396 ATHAVSEMHLKLVHNKPLYVGLAEKREQRLNRLQMRYKVGHNRDGMPMGMLPPHGMMPPM 455
Query: 419 HHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPG- 477
H G P + P Y P + P ++ QQ N +MPY + Q HPG
Sbjct: 456 HMGVPMM-PVNGQYMYPNPNIHGPNSS----QQ-----------NAMMPYQWRHQYHPGI 499
Query: 478 QRTGVRRSGNTHQMQQPQFMR----NSNQGIR---------------YLDNARNGTDQSV 518
G++ N P MR N+G+R + + T Q+
Sbjct: 500 PPVGMQVPFNARGANMPVPMRVYNPMGNRGVRGQNVPVQKLGQNGDKAMGDGFKFTPQAR 559
Query: 519 VSMVPVPFEVSGMPAT-----------------PVETPRPVPVPISTLTSA-LASASPDD 560
M V + S PAT P + +T+A LA+A P+
Sbjct: 560 NRMEMVQSDHSD-PATAGNARAHARATATTSAVPGRDSNDTTFQEAHITAATLAAAHPNM 618
Query: 561 RTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEA 620
+ +MLGE+L+P++ P A KVTGM+LEMD +E+L L+ES + L K EA+ VLQ+A
Sbjct: 619 QKQMLGEKLFPIIARHNPELAGKVTGMMLEMDNSELLILLESEKQLIAKADEAIRVLQQA 678
>gi|389748929|gb|EIM90106.1| polyadenylate binding protein [Stereum hirsutum FP-91666 SS1]
Length = 682
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/452 (49%), Positives = 298/452 (65%), Gaps = 28/452 (6%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
LYVG+L+ V E+ L+++F+ + V S+RVCRD R SLGYAYVNY N D A E L
Sbjct: 46 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNVTDGERALEQL 105
Query: 90 NFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNK----------ALCDTFAAF 139
N+ I G+ RIM+S RDP++RK+G GN+FIKNLD IDNK AL DTFAAF
Sbjct: 106 NYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDELIDNKVRTAQKTPPHALHDTFAAF 165
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G VLSCKVA D G+S+GYG+V +E EAA++AIK +NGML+NDK+VYVG + R+ER
Sbjct: 166 GNVLSCKVATDEQGRSRGYGYVHYETAEAAESAIKAVNGMLLNDKKVYVGYHISRKERQS 225
Query: 200 --QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + FTN+YV NL VT + ++F FG +TSA++ D +GKS+ FGFVNF++
Sbjct: 226 KLEEMRAHFTNLYVKNLDLEVTQDQFVELFSQFGAVTSAVIQTDEEGKSKGFGFVNFENH 285
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
+ AA AV+ L+ T N K +V RAQK+AERE +LR +E ++ + K +G NLY+KNL
Sbjct: 286 EQAAKAVDTLHDTDFNGKKLFVSRAQKKAEREEELRKSYESAKMEKLSKYQGVNLYIKNL 345
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
+D ++DEKL+ F FGTITSCKVM D G SKG GF FS P+EAT+A+ EMN KMIG
Sbjct: 346 EDDVDDEKLRAEFEPFGTITSCKVMRDDKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGS 405
Query: 378 KPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAP------------RL 425
KPLYV++AQR+E R+ +L++Q AQ A+G+PG + P +
Sbjct: 406 KPLYVSLAQRREVRRQQLESQIAQRNQIRMQQAAAAGLPGGYINGPMYYPPGPGAYPPQA 465
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGL 457
G + YGQ PG++PP+ Y QQV PG+
Sbjct: 466 GRGMMGYGQ--PGMLPPRPR-YAPNQQV-PGM 493
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 57/76 (75%)
Query: 550 TSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTK 609
T+AL++ASP ++ +MLGE +Y + +P A K+TGMLLEM+ E++HL+E+P+A+ K
Sbjct: 595 TNALSTASPMEQKQMLGEIIYMKIVAEQPELAGKITGMLLEMENAELIHLLETPQAMDAK 654
Query: 610 VAEAMAVLQEAAARSD 625
V EA+AVL E AA+ +
Sbjct: 655 VNEALAVLHEFAAKDE 670
>gi|119596296|gb|EAW75890.1| hCG2019100, isoform CRA_d [Homo sapiens]
Length = 639
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/381 (54%), Positives = 274/381 (71%), Gaps = 4/381 (1%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SGY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 6 SGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF + G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +
Sbjct: 66 ERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNI 125
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKVA D +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F R+ER +
Sbjct: 126 LSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAELG 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +FTN+YV NL V ++ L+ +F FG + S VM+D+ G SRCFGFVNF+ + A
Sbjct: 185 ARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEA 244
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
AV +NG + ++ Y GRAQKR ER+ +L+ +FEQ + R + +G NLY+KNLDDS
Sbjct: 245 QKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDS 304
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
I+D+KL++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG+++G KPL
Sbjct: 305 IDDDKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 363
Query: 381 YVAVAQRKEERKARLQAQFAQ 401
YVA+AQRKEERKA L Q+ Q
Sbjct: 364 YVALAQRKEERKAILTNQYMQ 384
>gi|156360993|ref|XP_001625306.1| predicted protein [Nematostella vectensis]
gi|156212133|gb|EDO33206.1| predicted protein [Nematostella vectensis]
Length = 584
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/464 (48%), Positives = 297/464 (64%), Gaps = 35/464 (7%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P A
Sbjct: 10 YPIASLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHAEK 69
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF PI G+P RIM+ RDPS+RKSG GN+FIKNLD SIDNK+L DTF+AFG +LS
Sbjct: 70 ALDTMNFDPIKGRPCRIMWQQRDPSLRKSGVGNIFIKNLDKSIDNKSLYDTFSAFGNILS 129
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-NVS 203
CK+A D G KGYGFV FE E+AA AI ++GML+NDK+V+VG ++ ++ER ++
Sbjct: 130 CKIAQDELGNPKGYGFVHFETEDAALEAIARVDGMLLNDKKVFVGRWMSKKERIEKMGTQ 189
Query: 204 P-KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
P KFTNVYV N + + DE +K+I G I S VM D +GKS+ FGFV+F++P+ A
Sbjct: 190 PKKFTNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKSKGFGFVSFETPEEAEE 249
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV LNG + + GRA+KRAER A+++A+ E++R R + +G NLY+KNLDD I+
Sbjct: 250 AVNVLNGKEIGGRRLWAGRAKKRAERAAEVKAEIEKKRQERINRFQGVNLYIKNLDDPID 309
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L+E FS +GTI+S KVM D G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 310 DERLREEFSPYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKAVTEMNGRILISKPLYV 369
Query: 383 AVAQRKEERKARLQA---------------------QFAQIRAPGGMSPLA-------SG 414
A+AQR+EERKA+L A Q Q+R GM P +G
Sbjct: 370 ALAQRREERKAQLAAQHMHRISGLRMHQGQRPFFTPQMPQVRPRWGMPPQQQQQQMRPTG 429
Query: 415 IP--GYHHGAPRLGPQ---QLYYGQGTPGLMPPQAAGYGFQQQV 453
+ G G P+ GP ++ Q G +PPQ Y F Q V
Sbjct: 430 VQNMGGQAGMPQGGPAGMPRMPVQQARMGGVPPQRQPYKFSQTV 473
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 56/73 (76%)
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
S LA+A+P ++ +MLGE+L+PL++ P A K+TGMLLE+D E+LH++ES +AL+ KV
Sbjct: 499 SVLAAATPQEQKQMLGERLFPLIQTNHPDMAGKITGMLLEIDNAELLHMLESRDALQMKV 558
Query: 611 AEAMAVLQEAAAR 623
EA++VL+ A+
Sbjct: 559 DEAVSVLRAHQAK 571
>gi|452820609|gb|EME27649.1| poly(A) binding / translation initiation factor [Galdieria
sulphuraria]
Length = 784
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/444 (51%), Positives = 295/444 (66%), Gaps = 21/444 (4%)
Query: 7 AAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKR 66
AAAT + + T A PS + ++YVGDL VNE+ L+++FS + V SVRVCRD R
Sbjct: 59 AAATRNIGTETNA--PS-VSSATIYVGDLHPEVNEANLFEVFSAIGPVASVRVCRDIVTR 115
Query: 67 SSLGYAYVNYSNPQDAANAKEALNFMPI---NGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
SLGYAYVN+ + DA A E +NF KP+R+M+ +RDP+IRKSG GNVFIKNL
Sbjct: 116 RSLGYAYVNFHSMDDAERALETMNFYACPQTRDKPMRLMWKNRDPTIRKSGAGNVFIKNL 175
Query: 124 DTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND 183
D +IDNK L DTF+ FG +LSCKVA D G S GYGFV FEN E A+ AI +NGML+ND
Sbjct: 176 DKAIDNKTLFDTFSVFGNILSCKVATDDEGNSLGYGFVHFENPEDAETAINKVNGMLLND 235
Query: 184 KQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETV-TDEDLKKIFGHFGTITSAIVMKDS 242
KQVYVG F RQER + FTNVY NL ++ T+E ++++F +G ITS V D
Sbjct: 236 KQVYVGYFKSRQEREASEETHIFTNVYTKNLIPSMCTEEKIRELFSLYGEITSVYVPVDE 295
Query: 243 DGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
+ + F FVNF P+ AA AVE+LNG K YVGRAQK+AEREA+LR K E +R
Sbjct: 296 NEVPKGFAFVNFAKPECAAKAVEELNGRDFEGKSLYVGRAQKKAEREAELRRKAENKRAE 355
Query: 303 RYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEE 362
+K +G NLY++NL D +++E L++ FS FGT+TSC+VM D G S+G GF FS PEE
Sbjct: 356 ILKKYQGVNLYVRNLPDDMDEEGLRKEFSNFGTLTSCRVMRDDKGVSRGFGFVCFSTPEE 415
Query: 363 ATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHH-- 420
AT+A+ EMNGKM+G+KPLYV +AQRKE R+A+L+AQ +I A G + +PG +
Sbjct: 416 ATKAVTEMNGKMMGKKPLYVCLAQRKEIRQAQLEAQ--RIAAAAGGLRIPGAVPGSLYPQ 473
Query: 421 -GAPRLGPQQLYYGQGTPGLMPPQ 443
GAP PQ PG+ PPQ
Sbjct: 474 PGAPMFYPQ--------PGV-PPQ 488
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 58/75 (77%)
Query: 547 STLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEAL 606
++L + L +ASP+ + ++LGE+LYPL+ +P A K+TGMLLEMD +EVLHLIESP+AL
Sbjct: 696 ASLIALLTNASPEQQKQILGERLYPLIYERQPGLAGKITGMLLEMDNSEVLHLIESPDAL 755
Query: 607 KTKVAEAMAVLQEAA 621
K+ EA+AVL+ A
Sbjct: 756 SEKIEEALAVLRAHA 770
>gi|195584475|ref|XP_002082032.1| GD11341 [Drosophila simulans]
gi|194194041|gb|EDX07617.1| GD11341 [Drosophila simulans]
Length = 379
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/374 (57%), Positives = 271/374 (72%), Gaps = 3/374 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL Q+VNES L+D FS V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF + KPIRIM+S RDPS+R+SG GNVFIKNLD +IDNKA+ DTF+AFG +LSCKVA
Sbjct: 63 MNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D G SKGYGFV FE EEAA +I +NGML+N K+VYVG F+ R+ER ++ + F
Sbjct: 123 TDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLF 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV N E DE LK+ F +G ITS VM DGKS+ FGFV F++ +AA AAV+
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQA 242
Query: 267 LNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LNG + K YV RAQK+AER+ +L+ KFE+ + R+E + G NLY+KNLDD+I+D++
Sbjct: 243 LNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDR 302
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L+ FS +G ITS KVM D+ G SKG GF F+ EAT A+ E+NG+++G KPLYVA+A
Sbjct: 303 LRIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALA 362
Query: 386 QRKEERKARLQAQF 399
QRKEERKA L +Q+
Sbjct: 363 QRKEERKAHLASQY 376
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 157/289 (54%), Gaps = 16/289 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L ++ L D F++ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N L+ +K + + R + V NV++ NL + ++ + F FG I S
Sbjct: 63 MNFDLVRNKPIRIMWSQRDPSLRRSGVG----NVFIKNLDRAIDNKAIYDTFSAFGNILS 118
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V D G S+ +GFV+F++ +AA +++K+NG N K YVG+ R ERE +L K
Sbjct: 119 CKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEK 178
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
KL N+Y+KN + +DEKLKE F +G ITS KVM + G SKG GF
Sbjct: 179 ---------AKL-FTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFV 228
Query: 356 AFSMPEEATRALNEMNGKMIGR-KPLYVAVAQRKEERKARLQAQFAQIR 403
AF E A A+ +NGK +G K LYVA AQ+K ER+ L+ +F +++
Sbjct: 229 AFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELK 277
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEEATRALN 368
A+LY+ +L +N+ L + FS G + S +V D S G + F P +A RAL+
Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 369 EMNGKMIGRKPLYVAVAQR 387
MN ++ KP+ + +QR
Sbjct: 62 TMNFDLVRNKPIRIMWSQR 80
>gi|340517112|gb|EGR47358.1| polyadenylate-binding protein [Trichoderma reesei QM6a]
Length = 745
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/510 (45%), Positives = 314/510 (61%), Gaps = 61/510 (11%)
Query: 4 TGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQ 63
T +A ++ T A P + SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD
Sbjct: 35 TSVSAGAEDASAPTPTAAPHPQNSASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDA 94
Query: 64 SKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
R SLGYAYVNY++ D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNL
Sbjct: 95 VTRRSLGYAYVNYNSTPDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNL 154
Query: 124 DTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND 183
D +IDNKAL DTFAAFG +LSCKVA D NG SKGYGFV +E +EAA AIK +NGML+N+
Sbjct: 155 DVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNE 214
Query: 184 KQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD 241
K+VYVG + +++R + + FTNVYV N+A VTDED +++F FG +TS+ + +D
Sbjct: 215 KKVYVGYHIPKKDRQSKFEEMKANFTNVYVKNIAPDVTDEDFRQLFEKFGDVTSSSLARD 274
Query: 242 SDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERI 301
+GK+R FGFVNF + +AA AVE+LNG + YVGRAQK+ ERE +LR +E R+
Sbjct: 275 QEGKTRGFGFVNFTTHEAAFKAVEELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARL 334
Query: 302 SRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD----------------- 344
+ K +G NLY+KNLDD ++DEKL+++F+EFG ITS KVM D
Sbjct: 335 EKANKYQGVNLYIKNLDDDVDDEKLRQMFAEFGPITSAKVMRDVPQEGEEEAKDQEKDKE 394
Query: 345 -------------------------QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
+ G SKG GF FS P++AT+A+ EMN +MI KP
Sbjct: 395 NQKEGEKEGESAEGAEKKTEKKSDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMINNKP 454
Query: 380 LYVAVAQRKEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQG- 435
LYVA+AQRK+ RK++L+A Q+R + A+G+P + P ++Y G
Sbjct: 455 LYVALAQRKDVRKSQLEASIQARNQLRM--QQAAAAAGMPQQYMQPP------VFYAPGQ 506
Query: 436 TPGLMPPQAAGYGFQQQVFP-----GLRPG 460
PG +P G F Q P G RPG
Sbjct: 507 QPGFIPQGGRGIPFPQPGMPMPNVQGGRPG 536
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 564 MLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
+LGE ++P ++ I A K+TGMLLEMD +E+++LIE ALK KV EA+AV E
Sbjct: 672 ILGELIFPKIQAINSELAGKITGMLLEMDNSELVNLIEDEAALKAKVDEALAVYDE 727
>gi|241948533|ref|XP_002416989.1| ARS consensus binding protein, putative; poly(A)-binding protein,
putative; polyadenylate tail-binding protein, putative;
polyadenylate-binding protein, cytoplasmic and nuclear,
putative [Candida dubliniensis CD36]
gi|223640327|emb|CAX44577.1| ARS consensus binding protein, putative [Candida dubliniensis CD36]
Length = 627
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 268/635 (42%), Positives = 368/635 (57%), Gaps = 61/635 (9%)
Query: 2 EATGAAAATAAVTSATTAAVPSGYG--NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRV 59
E AAA T A SA SG + SLYVG+L +VNE+ L+++FS + QV S+RV
Sbjct: 23 EEQPAAATTTADQSAEEQGESSGVAENSASLYVGELNPSVNEATLFEIFSPIGQVSSIRV 82
Query: 60 CRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVF 119
CRD + SLGYAYVNY +D A E LN+ PI G+P RIM+S RDPS R+SG GN+F
Sbjct: 83 CRDAVSKKSLGYAYVNYHKYEDGEKAIEELNYTPIEGRPCRIMWSQRDPSARRSGDGNIF 142
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGM 179
IKNL +IDNKAL DTF+AFG +LSCKVA D GQSK +GFV +E EAA+ AI+ +NGM
Sbjct: 143 IKNLHPAIDNKALHDTFSAFGKILSCKVAADEFGQSKCFGFVHYETAEAAEAAIENVNGM 202
Query: 180 LINDKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAI 237
L+ND++V+VG + +++R + + FTN+YV N+ ++E +K+F +G ITS
Sbjct: 203 LLNDREVFVGKHISKKDRESKFEEMKANFTNIYVKNIDLNYSEESFEKLFAPYGKITSIY 262
Query: 238 VMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
+ KD DGKS+ FGFVNF++ D+A AVE+LN N + YVGRAQK+ ER +L+ ++E
Sbjct: 263 LEKDQDGKSKGFGFVNFENHDSAVKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYE 322
Query: 298 QERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAF 357
R+ + K +G NL++KNLDD+I+ EKL+E F FGTITS KVMVD G SKG GF F
Sbjct: 323 AARLEKLAKYQGVNLFVKNLDDAIDSEKLEEEFKSFGTITSAKVMVDDAGKSKGFGFVCF 382
Query: 358 SMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPG 417
+ PEEAT+A+ EMN +MI KPLYVA+AQRK+ R+++L+ Q + A G+PG
Sbjct: 383 TTPEEATKAITEMNTRMINGKPLYVALAQRKDVRRSQLEQQIQARNQMRMQNAAAGGLPG 442
Query: 418 YHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPG 477
+ P ++YGQ G PP G +P GPN M + Q P
Sbjct: 443 QF-----MPP--MFYGQ--QGFFPPNGRG----NAPYP-----GPNPQMMMRGRGQPFPE 484
Query: 478 Q--RTGVRRSGNTHQMQQPQFMRNSN-QGIRYLDNARNGTDQSVVSMVPVPFEVSGMPAT 534
Q R G PQF ++ N Q +R P
Sbjct: 485 QWPRPGPNGQPVPVYGIPPQFQQDFNGQNMR--------------------------PQQ 518
Query: 535 PVETPRPVPVPISTLT-----SALASASP-DDRTRMLGEQLYPLV----ENIEPVHASKV 584
+ PR P T +A+ S+ P D + R+LGE+LYP + + EP A K+
Sbjct: 519 QQQQPRGGYYPNRNQTNKRDLAAIISSVPQDQQKRILGEELYPKIVATGKAQEPEAAGKI 578
Query: 585 TGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
TGM+L ++ E+L L++ E +A+ +E
Sbjct: 579 TGMMLGLENQEILDLLDDDELFNNHFEDALTAFEE 613
>gi|303322729|ref|XP_003071356.1| Poly-binding protein FabM, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240111058|gb|EER29211.1| Poly-binding protein FabM, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 768
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 285/695 (41%), Positives = 375/695 (53%), Gaps = 114/695 (16%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ +V E+ L++LFS + QV S+RVCRD R SLGYAYVNY+N D A
Sbjct: 54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 113
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLDT+IDNKAL DTFAAFG +LSCK
Sbjct: 114 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 173
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA D G SKGYGFV +E EAAQNAIK +NGML+NDK+V+VG + +++R + +
Sbjct: 174 VAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSKFEEMKA 233
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFGFVNFQSPDAAAAA 263
FTNVYV N+ + T+E+ + +F FG ITSA + +D++ GKSR FGFVNF S D AAAA
Sbjct: 234 NFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAA 293
Query: 264 VEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN----LDD 319
VE LN + YVGRAQK+ ERE +LR ++E RI + K +G NLY+KN +DD
Sbjct: 294 VEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDD 353
Query: 320 -----------SINDEKLKELFSEFGTITSCKVMVDQH---------------------- 346
+I K+ F+ T S K
Sbjct: 354 EKLRELFSSYGTITSAKVMRDFAPESTSDSEKEAKKDSKEPETKEEEPKDEAGDNAENKD 413
Query: 347 ----------------GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEE 390
G SKG GF FS P+EA++A+ EMN +M+ KPLYVA+AQRK+
Sbjct: 414 NKENKAESKKSEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVHGKPLYVALAQRKDV 473
Query: 391 RKARLQAQF-AQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGF 449
R+++L+A A+ + A+G+P P + P ++YG G +P Q G F
Sbjct: 474 RRSQLEASIQARNTIRQQQAAAAAGMP-----QPFMQP-AVFYGPGQQNFIPNQRGGMPF 527
Query: 450 QQ--QVFPGLRPGG------------------PNYIMP---YHLQRQVHP--GQRTGVRR 484
QQ V PG+ PGG PN +P Y + Q P Q G+
Sbjct: 528 QQPGMVIPGM-PGGRHGQFGGFPGQQGGRGMNPNQQIPPNAYGIGAQGLPMGMQGAGIPN 586
Query: 485 SGNTHQMQQPQ--FMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMP-----ATPVE 537
N QM Q Q F R Q + G +V M P GMP P +
Sbjct: 587 GLNYPQMGQVQAPFGRGRGQAP-----SGQGMPPNVQGMGPGGQYGRGMPVQQGMGRPGQ 641
Query: 538 TPRPVPVPI------------STLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKV 584
R P S LT L +A P + +MLGE +YP ++ +P A K+
Sbjct: 642 AGRGQGAPAQAVGQRDENASPSGLTLQVLNAAPPAQQKQMLGEAIYPKIQAQQPELAGKI 701
Query: 585 TGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
TGMLLEMD E+L L++ ALK KV EA+ V E
Sbjct: 702 TGMLLEMDNAELLALVDDDAALKAKVDEALTVYDE 736
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 21/202 (10%)
Query: 204 PKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAA 262
P ++YV L +VT+ L ++F G + S V +D+ +S + +VN+ +
Sbjct: 52 PHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGER 111
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
A+E LN T + + +Q R+ LR K N+++KNLD +I+
Sbjct: 112 ALEDLNYTLIKGRPCRIMWSQ----RDPALR------------KTGQGNVFIKNLDTAID 155
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
++ L + F+ FG I SCKV D+ G SKG GF + E A A+ +NG ++ K ++V
Sbjct: 156 NKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFV 215
Query: 383 AVAQRKEERKARLQAQFAQIRA 404
K++R Q++F +++A
Sbjct: 216 GHHIAKKDR----QSKFEEMKA 233
>gi|320032897|gb|EFW14847.1| polyadenylate-binding protein [Coccidioides posadasii str.
Silveira]
Length = 768
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 285/695 (41%), Positives = 375/695 (53%), Gaps = 114/695 (16%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ +V E+ L++LFS + QV S+RVCRD R SLGYAYVNY+N D A
Sbjct: 54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 113
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLDT+IDNKAL DTFAAFG +LSCK
Sbjct: 114 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 173
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA D G SKGYGFV +E EAAQNAIK +NGML+NDK+V+VG + +++R + +
Sbjct: 174 VAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSKFEEMKA 233
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFGFVNFQSPDAAAAA 263
FTNVYV N+ + T+E+ + +F FG ITSA + +D++ GKSR FGFVNF S D AAAA
Sbjct: 234 NFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAA 293
Query: 264 VEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN----LDD 319
VE LN + YVGRAQK+ ERE +LR ++E RI + K +G NLY+KN +DD
Sbjct: 294 VEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDD 353
Query: 320 -----------SINDEKLKELFSEFGTITSCKVMVDQH---------------------- 346
+I K+ F+ T S K
Sbjct: 354 EKLRELFSSYGTITSAKVMRDFAPESTSDSEKEAKKDSKEPETKEEEPKDEAGDNAENKD 413
Query: 347 ----------------GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEE 390
G SKG GF FS P+EA++A+ EMN +M+ KPLYVA+AQRK+
Sbjct: 414 NKENKAESKKSEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVHGKPLYVALAQRKDV 473
Query: 391 RKARLQAQF-AQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGF 449
R+++L+A A+ + A+G+P P + P ++YG G +P Q G F
Sbjct: 474 RRSQLEASIQARNTIRQQQAAAAAGMP-----QPFMQP-AVFYGPGQQNFIPNQRGGMPF 527
Query: 450 QQ--QVFPGLRPGG------------------PNYIMP---YHLQRQVHP--GQRTGVRR 484
QQ V PG+ PGG PN +P Y + Q P Q G+
Sbjct: 528 QQPGMVIPGM-PGGRHGQFGGFPGQQGGRGMNPNQQIPPNAYGIGAQGLPMGMQGAGIPN 586
Query: 485 SGNTHQMQQPQ--FMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMP-----ATPVE 537
N QM Q Q F R Q + G +V M P GMP P +
Sbjct: 587 GLNYPQMGQVQAPFGRGRGQAP-----SGQGMPPNVQGMGPGGQYGRGMPVQQGMGRPGQ 641
Query: 538 TPRPVPVPI------------STLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKV 584
R P S LT L +A P + +MLGE +YP ++ +P A K+
Sbjct: 642 AGRGQGAPAQAVGQRDENASPSGLTLQVLNAAPPAQQKQMLGEAIYPKIQAQQPELAGKI 701
Query: 585 TGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
TGMLLEMD E+L L++ ALK KV EA+ V E
Sbjct: 702 TGMLLEMDNAELLALVDDDAALKAKVDEALTVYDE 736
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 21/202 (10%)
Query: 204 PKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAA 262
P ++YV L +VT+ L ++F G + S V +D+ +S + +VN+ +
Sbjct: 52 PHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGER 111
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
A+E LN T + + +Q R+ LR K N+++KNLD +I+
Sbjct: 112 ALEDLNYTLIKGRPCRIMWSQ----RDPALR------------KTGQGNVFIKNLDTAID 155
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
++ L + F+ FG I SCKV D+ G SKG GF + E A A+ +NG ++ K ++V
Sbjct: 156 NKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFV 215
Query: 383 AVAQRKEERKARLQAQFAQIRA 404
K++R Q++F +++A
Sbjct: 216 GHHIAKKDR----QSKFEEMKA 233
>gi|440797930|gb|ELR19004.1| polyadenylate-binding protein family protein [Acanthamoeba
castellanii str. Neff]
Length = 462
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/378 (56%), Positives = 270/378 (71%), Gaps = 6/378 (1%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y + SLYVGDL V E+ L+++F V V S+RVCRD R SLGYAYVN+ N
Sbjct: 2 AANSPYQSASLYVGDLNPTVTEALLFEIFKAVGPVASIRVCRDAVTRRSLGYAYVNFHNV 61
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + LN+ I G+P RIM+SHRDPSIRKSG GN+FIKNLD SIDNKAL DTF+AF
Sbjct: 62 VDAERALDTLNYTLIKGRPCRIMWSHRDPSIRKSGQGNIFIKNLDKSIDNKALYDTFSAF 121
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV D G SKGYGFV +E EAA +AI +NG ++N K VYVG F+ R+ER
Sbjct: 122 GNILSCKVVTDGKGNSKGYGFVHYETSEAADSAIAKVNGKMLNGKIVYVGRFIARKERTP 181
Query: 200 QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDA 259
+ KFTN+Y+ NL E T+EDLK+ FG FGT+ SA++MKD R F FVNF+ +A
Sbjct: 182 GSDPEKFTNIYIKNLGEAYTEEDLKRDFGAFGTVQSAVLMKDPRDIGRQFAFVNFEDHEA 241
Query: 260 AAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDD 319
A A E+LNG DK YVGRAQK++ERE+ LR K +ER +Y+ G NLY+KNLDD
Sbjct: 242 AHRATEELNGRKLGDKEVYVGRAQKKSERESFLR-KLREERAQKYQ---GINLYIKNLDD 297
Query: 320 SINDEKLKELFSE--FGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
++NDE+L +LFS FG ITSCKVM D G S+G GF ++ PE+A++A++EMNGKM+
Sbjct: 298 TVNDEELHKLFSALPFGQITSCKVMSDDKGNSRGFGFVCYTNPEDASKAVSEMNGKMVAN 357
Query: 378 KPLYVAVAQRKEERKARL 395
KP+YVA+A+RK+ R A+L
Sbjct: 358 KPIYVALAERKDVRSAKL 375
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%), Gaps = 2/57 (3%)
Query: 564 MLGEQLYPLVENI-EPVHASKVTGMLLE-MDQTEVLHLIESPEALKTKVAEAMAVLQ 618
++GE LYPLVE + K+TGMLLE MD TE+LHL++SP+AL+ KV EA+ VL+
Sbjct: 391 IIGETLYPLVEALTSATQGPKITGMLLESMDVTELLHLLQSPDALREKVDEAVGVLK 447
>gi|355745175|gb|EHH49800.1| hypothetical protein EGM_00521 [Macaca fascicularis]
Length = 635
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/363 (58%), Positives = 268/363 (73%), Gaps = 10/363 (2%)
Query: 44 LYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMY 103
LY+ FS V+S+RVCRD R SLGYAYVN+ P DA A + +NF I GKPIRIM+
Sbjct: 2 LYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMW 61
Query: 104 SHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQF 163
S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AFG +LSCKV D NG SKGY FV F
Sbjct: 62 SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHF 120
Query: 164 ENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDE 221
E +EAA AI+ +NGML+ND++V+VG F R+ER + + +FTNVY+ N E V DE
Sbjct: 121 ETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDE 180
Query: 222 DLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGR 281
LK++F FG S VM+D GKS+ FGFV+++ + A AVE++NG + K+ +VGR
Sbjct: 181 SLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGR 240
Query: 282 AQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITS 338
AQK+ ER+A+L+ KFE QERISRY+ G NLY+KNLDD+I+DEKL++ FS FG+ITS
Sbjct: 241 AQKKVERQAELKRKFEQLKQERISRYQ---GVNLYIKNLDDTIDDEKLRKEFSPFGSITS 297
Query: 339 CKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQ 398
KVM++ G SKG GF FS PEEAT+A+ EMNG+++G KPLYVA+AQRKEERKA L Q
Sbjct: 298 AKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQ 356
Query: 399 FAQ 401
+ Q
Sbjct: 357 YMQ 359
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 157/273 (57%), Gaps = 16/273 (5%)
Query: 132 LCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L + F+ G VLS +V D +S GY +V F+ A+ A+ +N +I K + +
Sbjct: 2 LYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMW 61
Query: 191 FVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFG 250
R + V NV++ NL +++ ++ L F FG I S V+ D +G S+ +
Sbjct: 62 SQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYA 116
Query: 251 FVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGA 310
FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L AK ++
Sbjct: 117 FVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKE----------FT 166
Query: 311 NLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEM 370
N+Y+KN + ++DE LKELFS+FG S KVM D G SKG GF ++ E+A +A+ EM
Sbjct: 167 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 226
Query: 371 NGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
NGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 227 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLK 259
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 110/204 (53%), Gaps = 23/204 (11%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + + V++ L +LFSQ + +SV+V RD S +S G+ +V+Y +DA A E
Sbjct: 166 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSK-GFGFVSYEKHEDANKAVE 224
Query: 88 ALNFMPINGKPI----------------RIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
+N I+GK I R + I + N++IKNLD +ID++
Sbjct: 225 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 284
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L F+ FG++ S KV ++ +G+SKG+GFV F + E A A+ +NG ++ K +YV L
Sbjct: 285 LRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 343
Query: 192 VRRQERAQQNVSPKFTNVYVNNLA 215
R++ER TN Y+ +A
Sbjct: 344 QRKEERKAH-----LTNQYMQRVA 362
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 75/105 (71%), Gaps = 7/105 (6%)
Query: 535 PVETPRPV-----PVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 529 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 586
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 587 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 631
>gi|357510891|ref|XP_003625734.1| Polyadenylate binding protein [Medicago truncatula]
gi|355500749|gb|AES81952.1| Polyadenylate binding protein [Medicago truncatula]
Length = 613
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 263/598 (43%), Positives = 350/598 (58%), Gaps = 39/598 (6%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
AVP SLYVGDL ++++SQL+D FS + SVR+CRD S SL Y YVN+ +P
Sbjct: 2 AVPPSATPASLYVGDLHPDLSDSQLHDAFSDFKTLASVRICRDSSSGKSLCYGYVNFLSP 61
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A E N +NGK IR+M+S RDP RKS GNVF+KNL SIDN L D F F
Sbjct: 62 HDAIRAIEVKNHSTLNGKAIRVMWSRRDPDARKSCIGNVFVKNLAESIDNSGLEDMFKKF 121
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LS KV + +G+SKGYGFVQFE EE+A AI+ LNG L+ DKQ+YVG FV++ +R
Sbjct: 122 GNILSSKVVMSEDGKSKGYGFVQFETEESANAAIERLNGYLVGDKQIYVGKFVKKSDRIS 181
Query: 200 QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDA 259
++TN+Y+ NL +++ L++ F FG I S V KDS+G S+ FGFVNF +P+
Sbjct: 182 SGPDTRYTNLYMKNLDLDISETLLREKFSSFGKIISLAVAKDSNGMSKGFGFVNFDNPED 241
Query: 260 AAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDD 319
A A+E +NG K+ YV RAQK+AERE L +FE++R + K KG+N+Y+KN+DD
Sbjct: 242 AKRAMETMNGLQLGSKILYVARAQKKAEREQILHQQFEEKRKEQVLKYKGSNIYVKNIDD 301
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
+++DE L++ FS GTITS K+M D G SKG GF FS PEEA +A+N +G M KP
Sbjct: 302 NVSDEGLRDHFSVCGTITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNSFHGFMFHGKP 361
Query: 380 LYVAVAQRKEERKARLQAQFAQIRA----------PGGMSPL---ASGIPGYHHGAPRLG 426
LYV++AQRKE+R+A+LQ Q+AQ A PGG P A+G+ H PR G
Sbjct: 362 LYVSLAQRKEDRQAQLQLQYAQQIAGLAGPSTAIVPGGYPPFYYTATGV--VSHAPPRAG 419
Query: 427 ----PQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGV 482
P L G G PP + FQQ P + N H Q + G+ G
Sbjct: 420 LVYQPMALRPGWRANGSAPPARS---FQQSPTPVV----SNNNTRQHRQNR---GRMNGH 469
Query: 483 RRS-GNTHQ-MQQPQFMRNSNQGIRYLDNA---RNGTDQSVVSMVPVPFEVSGMPATPVE 537
S GNTH PQ + S I +++ R G + V S E ++
Sbjct: 470 AVSQGNTHSGTYMPQAQQASQSAISSRESSTQQRTGQAKYVPSGRHREMEKGSGLSSSGG 529
Query: 538 TPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTE 595
+ P L S LA+A+P+ + +LGE LY LV+ I+P A+K+TGMLLEMD E
Sbjct: 530 SLGP-----EVLHSMLANATPEQQKEILGEHLYMLVQKIKPNLAAKITGMLLEMDNVE 582
>gi|119189891|ref|XP_001245552.1| hypothetical protein CIMG_04993 [Coccidioides immitis RS]
gi|121937111|sp|Q1DXH0.1|PABP_COCIM RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|392868454|gb|EAS34245.2| polyadenylate-binding protein, cytoplasmic and nuclear
[Coccidioides immitis RS]
Length = 768
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 283/695 (40%), Positives = 374/695 (53%), Gaps = 114/695 (16%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ +V E+ L++LFS + QV S+RVCRD R SLGYAYVNY+N D A
Sbjct: 54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 113
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLDT+IDNKAL DTFAAFG +LSCK
Sbjct: 114 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 173
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA D G SKGYGFV +E EAAQNAIK +NGML+NDK+V+VG + +++R + +
Sbjct: 174 VAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSKFEEMKA 233
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFGFVNFQSPDAAAAA 263
FTNVYV N+ + T+E+ + +F FG ITSA + +D++ GKSR FGFVNF S D AAAA
Sbjct: 234 NFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAA 293
Query: 264 VEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN----LDD 319
VE LN + YVGRAQK+ ERE +LR ++E RI + K +G NLY+KN +DD
Sbjct: 294 VEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDD 353
Query: 320 -----------SINDEKLKELFSEFGTITSCKVMVDQH---------------------- 346
+I K+ F+ T S K
Sbjct: 354 EKLRELFSSYGTITSAKVMRDFAPESTSDSEKEAKKDSKEPETKEEEPKDEAGDNAENKD 413
Query: 347 ----------------GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEE 390
G SKG GF FS P+EA++A+ EMN +M+ KPLYVA+AQRK+
Sbjct: 414 NKENKAESKKSEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVHGKPLYVALAQRKDV 473
Query: 391 RKARLQAQF-AQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGF 449
R+++L+A A+ + A+G+P P + P ++YG G +P Q G F
Sbjct: 474 RRSQLEASIQARNTIRQQQAAAAAGMP-----QPFMQPA-VFYGPGQQNFIPNQRGGMPF 527
Query: 450 QQ--QVFPGLRPGG------------------PNYIMP---YHLQRQVHPG--QRTGVRR 484
QQ V PG+ PGG PN +P Y + Q P Q G+
Sbjct: 528 QQPGMVIPGM-PGGRHGQFGGFPGQQGGRGMNPNQQIPPNAYGIGAQGLPMGMQGAGIPN 586
Query: 485 SGNTHQMQQPQ--FMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMP-----ATPVE 537
N QM Q Q F R Q + G +V M P GMP P +
Sbjct: 587 GLNYPQMGQVQAPFGRGRGQAP-----SGQGMPPNVQGMGPGGQYGRGMPVQQGMGRPGQ 641
Query: 538 TPRPVPVPISTLTSALASASPDDRT-------------RMLGEQLYPLVENIEPVHASKV 584
R P + +ASP+ T +MLGE +YP ++ +P A K+
Sbjct: 642 AGRGQGAPAQAVGQRDENASPNGLTLQVLNAAPPAQQKQMLGEAIYPKIQAQQPELAGKI 701
Query: 585 TGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
TGMLLEMD E+L L++ ALK KV EA+ V E
Sbjct: 702 TGMLLEMDNAELLALVDDDAALKAKVDEALTVYDE 736
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 21/202 (10%)
Query: 204 PKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAA 262
P ++YV L +VT+ L ++F G + S V +D+ +S + +VN+ +
Sbjct: 52 PHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGER 111
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
A+E LN T + + +Q R+ LR K N+++KNLD +I+
Sbjct: 112 ALEDLNYTLIKGRPCRIMWSQ----RDPALR------------KTGQGNVFIKNLDTAID 155
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
++ L + F+ FG I SCKV D+ G SKG GF + E A A+ +NG ++ K ++V
Sbjct: 156 NKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFV 215
Query: 383 AVAQRKEERKARLQAQFAQIRA 404
K++R Q++F +++A
Sbjct: 216 GHHIAKKDR----QSKFEEMKA 233
>gi|50306049|ref|XP_452986.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690315|sp|Q6CSV3.1|PABP_KLULA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49642119|emb|CAH01837.1| KLLA0C17600p [Kluyveromyces lactis]
Length = 592
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 247/605 (40%), Positives = 351/605 (58%), Gaps = 84/605 (13%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
N SLYVG+L+ N+ E+ LYD+FS + + S+RVCRD ++SLGYAYVNY++ + A
Sbjct: 49 NASLYVGELDPNITEALLYDVFSPLGPISSIRVCRDAVTKASLGYAYVNYTDYEAGKKAI 108
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
+ LN+ ING+P RIM+S RDP+IRK G GN+FIKNL +IDNKAL +TF+ FG VLSCK
Sbjct: 109 QELNYAEINGRPCRIMWSERDPAIRKKGSGNIFIKNLHPAIDNKALHETFSTFGEVLSCK 168
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA+D NG S+G+GFV F+ E A++AI+ +NGML+N +VYV + V +++R +
Sbjct: 169 VALDENGNSRGFGFVHFKEESDAKDAIEAVNGMLMNGLEVYVAMHVPKKDRISKLEEAKA 228
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTN+YV N+ TDE+ +++F +G I SA + KD++GK + FGFVNF +AAA AV
Sbjct: 229 NFTNIYVKNIDVETTDEEFEQLFSQYGEIVSAALEKDAEGKPKGFGFVNFVDHNAAAKAV 288
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
E+LNG + YVGRAQK+ ER +L+ ++EQ R+ + K +G NL++KNLDDSI+DE
Sbjct: 289 EELNGKEFKSQALYVGRAQKKYERAEELKKQYEQYRLEKLAKFQGVNLFIKNLDDSIDDE 348
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KLKE F+ +GTITS +VM DQ G SKG GF FS PEEAT+A+ E N +++ KPLYVA+
Sbjct: 349 KLKEEFAPYGTITSARVMRDQEGNSKGFGFVCFSSPEEATKAMTEKNQQIVAGKPLYVAI 408
Query: 385 AQRKEERKARLQAQFA---QIR----APGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTP 437
AQRK+ R+++L Q QIR + A+G+PG + PQ Y
Sbjct: 409 AQRKDVRRSQLAQQIQARNQIRFQQQQQQQAAAAAAGMPGQYM------PQMFY------ 456
Query: 438 GLMPPQAAGYGFQQQVFPGLRPG--GPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQ 495
G+M P+ FPG PG GP G+ ++G
Sbjct: 457 GVMAPRG---------FPGPNPGMNGP---------------MGAGIPKNG--------- 483
Query: 496 FMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALAS 555
MVP P + +G P P+ P
Sbjct: 484 -------------------------MVPPPQQFAGRPNGPMYQGMPPQNQFPRHQQQHYI 518
Query: 556 ASPDDRTRMLGEQLYPLVE-NIEPVHAS-KVTGMLLEMDQTEVLHLIESPEALKTKVAEA 613
R + LGEQLY V I+ +A+ K+TGM+L++ +V+ L+++ E + + EA
Sbjct: 519 QQQKQR-QALGEQLYKKVSAKIDDENAAGKITGMILDLPPQQVIQLLDNDEQFEQQFQEA 577
Query: 614 MAVLQ 618
+A +
Sbjct: 578 LAAYE 582
>gi|413956150|gb|AFW88799.1| hypothetical protein ZEAMMB73_294352 [Zea mays]
Length = 735
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 246/613 (40%), Positives = 351/613 (57%), Gaps = 28/613 (4%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
LYVGDL ++V E L++ FS++ V SVRVCRD + SL Y YVNY + DA A + L
Sbjct: 123 LYVGDLHEDVAEEHLFEAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVVALDKL 182
Query: 90 NFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAI 149
N + KPIR+M+S+RDP R+SG GN+F+KNL +S+DN +L + F+ FG VLSCKVA
Sbjct: 183 NHSLVLDKPIRVMWSNRDPDARRSGVGNIFVKNLSSSVDNASLQELFSKFGDVLSCKVAK 242
Query: 150 DSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNV 209
+ +G S+GYGFVQF ++E+A AI LNG L ND++++V F+++ ER+ N KFTN+
Sbjct: 243 NEDGTSRGYGFVQFTSQESADEAIGNLNGSLFNDRKLHVATFIKKSERSANN-DDKFTNL 301
Query: 210 YVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNG 269
Y+ +L + +T+E +K F FG+I S +MK DG S FGFV+FQ+P++A A +NG
Sbjct: 302 YMKHLDDDITEELVKLKFSQFGSIVSVKIMKRPDGSSLGFGFVSFQNPESAIKAQSTMNG 361
Query: 270 TTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKEL 329
K YV RAQK+ ER+ L+ E++R + +N+Y+KN+ D ++D+ L+
Sbjct: 362 MLLGSKALYVARAQKKEERKQYLQRLHEEKRNEIMTRCNESNVYIKNIHDEVDDDALRAR 421
Query: 330 FSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKE 389
F EFG ITS KVM D G S+G GF +S PEEA A+N M G M KPLYVA+ QRKE
Sbjct: 422 FVEFGNITSAKVMRDDKGISRGFGFVCYSTPEEAKSAVNNMRGVMFFGKPLYVAIFQRKE 481
Query: 390 ERKARLQAQFAQI-RAPG-GMSPLASGIPGYHHGAPRLGPQQLYYGQGTPG---LMPPQA 444
ERKA+LQ FAQ+ R G S + +G P + P + QG P + PP
Sbjct: 482 ERKAKLQQHFAQLARMVGPANSMIPTGYPQVYFAHP-----STHIPQGPPRHGFVYPPM- 535
Query: 445 AGYGFQQQVFPGLRPGGPNY------IMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMR 498
G + P + P PN +MP + R G H + +M
Sbjct: 536 ---GLSHEWRPSMFPPAPNLQQIHSPVMPNSPRHYRSNRGRMGGNMMPLPHAVHTMNYMT 592
Query: 499 NSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMP-ATPVETPRPVPVPISTLTSALASAS 557
+ ++ R + P F M + + PV + ++ LASA
Sbjct: 593 HPQPAKEFMSLPRQRFNH------PKYFSNDVMANSLAIHQSDPVSTMNDSFSNYLASAP 646
Query: 558 PDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVL 617
P ++ +LG +LYPLVE +P ASK+TGMLLE+D +EV+ L+ S E L KV E + +L
Sbjct: 647 PAEQKNLLGNRLYPLVERHQPELASKITGMLLELDNSEVVTLLCSSEMLSVKVDECVQLL 706
Query: 618 QEAAARSDVNEKL 630
Q +++ +E L
Sbjct: 707 QATKPKAEDHEAL 719
>gi|119596295|gb|EAW75889.1| hCG2019100, isoform CRA_c [Homo sapiens]
Length = 433
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/384 (54%), Positives = 275/384 (71%), Gaps = 4/384 (1%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A SGY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P
Sbjct: 3 ASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF + G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ F
Sbjct: 63 ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKVA D +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTN+YV NL V ++ L+ +F FG + S VM+D+ G SRCFGFVNF+
Sbjct: 182 ELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
+ A AV +NG + ++ Y GRAQKR ER+ +L+ +FEQ + R + +G NLY+KNL
Sbjct: 242 EEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNL 301
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
DDSI+D+KL++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG+++G
Sbjct: 302 DDSIDDDKLRKEFSPYGVITSAKVMT-EGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 378 KPLYVAVAQRKEERKARLQAQFAQ 401
KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 361 KPLYVALAQRKEERKAILTNQYMQ 384
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 160/294 (54%), Gaps = 18/294 (6%)
Query: 113 SGY--GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAA 169
SGY ++++ +L + L + F+ G +LS +V D + +S GY ++ F+ A
Sbjct: 6 SGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 170 QNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGH 229
+ A+ +N ++ + + + R + V N+++ NL +++ ++ L F
Sbjct: 66 ERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVG----NIFIKNLEDSIDNKALYDTFST 121
Query: 230 FGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAERE 289
FG I S V D G SR FGFV+F++ +AA A+ +NG ND+ +VG + R ERE
Sbjct: 122 FGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRRERE 180
Query: 290 ADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFS 349
A+L A+ L+ N+Y+KNL ++++ L++LFS+FG + S KVM D G S
Sbjct: 181 AELGAR----------ALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS 230
Query: 350 KGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ GF F EEA +A+ MNGK + + LY AQ++ ER+ L+ +F Q++
Sbjct: 231 RCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMK 284
>gi|255731137|ref|XP_002550493.1| polyadenylate-binding protein [Candida tropicalis MYA-3404]
gi|240132450|gb|EER32008.1| polyadenylate-binding protein [Candida tropicalis MYA-3404]
Length = 633
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 260/605 (42%), Positives = 360/605 (59%), Gaps = 50/605 (8%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L +VNE+ L+++FS + QV S+RVCRD + SLGYAYVNY +D A
Sbjct: 48 SASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKFEDGEKAI 107
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ PI G+P RIM+S RDPS R+SG GN+FIKNL +IDNKAL DTF+AFG +LSCK
Sbjct: 108 EELNYTPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSCK 167
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA D GQSK +GFV +E EAA+ AI+ +NGML+ND++V+VG + +++R + +
Sbjct: 168 VATDELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEMKA 227
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTN+YV N+ T+E+ +K+F +G ITS + KD DGKS+ FGFVNF+ DAA AV
Sbjct: 228 NFTNIYVKNIDLAYTEEEFEKLFAPYGKITSIYLEKDQDGKSKGFGFVNFEEHDAAVKAV 287
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
E+LN N + YVGRAQK+ ER +L+ ++E R+ + K +G NL++KNLDDSI+ E
Sbjct: 288 EELNDKEINGQKIYVGRAQKKRERMEELKKQYEAIRLEKLAKYQGVNLFVKNLDDSIDSE 347
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KL+E F FGTITS KVMVD G SKG GF F+ PEEAT+A+ EMN +M+ KPLYVA+
Sbjct: 348 KLEEEFKPFGTITSAKVMVDDAGKSKGFGFVCFTTPEEATKAITEMNQRMVNNKPLYVAL 407
Query: 385 AQRKEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMP 441
AQRK+ R+++L+ Q Q+R + A G+PG + P ++YGQ G P
Sbjct: 408 AQRKDVRRSQLEQQIQARNQMRMQNAAA--AGGLPGQF-----MPP--MFYGQ--QGFFP 456
Query: 442 PQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQ--RTGVRRSGNTHQMQQPQFMRN 499
P G FP GPN M + Q P Q R G PQF ++
Sbjct: 457 PNGRGNA----PFP-----GPNPQMMMRGRGQPFPEQWPRPGPNGQPVPVYGIPPQFQQD 507
Query: 500 SN-QGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASP 558
N Q +R + + G +T + L + +AS
Sbjct: 508 FNGQNVRPPQQQQQQQPR------------GGYYPNRNQTNK------RDLAAIIASVPQ 549
Query: 559 DDRTRMLGEQLYPLV----ENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAM 614
D + R+LGE+LYP + + EP A K+TGM+L ++ E+L L++ E +A+
Sbjct: 550 DQQKRILGEELYPRIVATGKAQEPEAAGKITGMMLGLENQEILDLLDDDELFNNHFEDAL 609
Query: 615 AVLQE 619
+E
Sbjct: 610 TAFEE 614
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 24/207 (11%)
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAA 260
V+ ++YV L +V + L +IF G ++S V +D+ KS + +VN+ +
Sbjct: 44 VAENSASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKFEDG 103
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQK--RAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
A+E+LN T + + +Q+ A R D N+++KNL
Sbjct: 104 EKAIEELNYTPIEGRPCRIMWSQRDPSARRSGD------------------GNIFIKNLH 145
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
+I+++ L + FS FG I SCKV D+ G SK GF + E A A+ +NG ++ +
Sbjct: 146 PAIDNKALHDTFSAFGKILSCKVATDELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDR 205
Query: 379 PLYVAVAQRKEERKAR---LQAQFAQI 402
++V K++R+++ ++A F I
Sbjct: 206 EVFVGKHISKKDRESKFEEMKANFTNI 232
>gi|325182450|emb|CCA16902.1| polyadenylatebinding protein putative [Albugo laibachii Nc14]
Length = 675
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 240/469 (51%), Positives = 305/469 (65%), Gaps = 24/469 (5%)
Query: 6 AAAATAAVTSATTAAVPSG----YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCR 61
A AAT+ S T A+V SG + SLYVGD+ +V E+ L+++F+ V V S+RVCR
Sbjct: 51 ANAATSPTNSPTAASV-SGPVQPFQTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCR 109
Query: 62 DQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIK 121
D R SLGYAYVN+ N DA A + +NF I G P RIM+S RDPS+RKSG GN+F+K
Sbjct: 110 DAVTRRSLGYAYVNFHNLVDAERALDTMNFTCIKGVPCRIMWSQRDPSLRKSGVGNIFVK 169
Query: 122 NLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLI 181
NLD SIDNKAL DTF+ FG +LSCKVA D GQSKGYG+V +E EAA AI +NGMLI
Sbjct: 170 NLDPSIDNKALYDTFSLFGNILSCKVANDPTGQSKGYGYVHYETAEAATEAINKINGMLI 229
Query: 182 NDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD 241
+V+VG F +RQER +TN YV NL TD DL++ F FG + SA+VMKD
Sbjct: 230 AGTEVFVGHFQKRQERPDIE---DWTNCYVKNLPTQWTDADLRREFEPFGQVNSAVVMKD 286
Query: 242 SDGKS-RCFGFVNFQSPDAAAAAVEKLNGTTNN-----DKVWYVGRAQKRAEREADLRAK 295
+ + R FGFVN++ D A AAVE L+G T D YVG+AQKR ERE +LR K
Sbjct: 287 PNSATNRGFGFVNYEDADGAHAAVEGLSGKTFKGVNGVDLELYVGKAQKRTERERELRQK 346
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
F+Q ++ R K +G NLY+KNLDD + DE+L+E F+ +GTITS +VM D G S+G GF
Sbjct: 347 FDQLKLERINKYQGVNLYVKNLDDLLQDEELREAFTNYGTITSARVMRDSTGNSRGFGFV 406
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGI 415
FS PEEA A+ EMNGK+I KP+YVA AQRKE R+A+L+AQ AQ RA G + + G+
Sbjct: 407 CFSTPEEAATAVAEMNGKLITGKPVYVAFAQRKEVRRAQLEAQHAQ-RATGVL--VNRGM 463
Query: 416 PGYHHGAPRLGPQQLYYGQGTPGLMPPQA-AGYGFQQQVFP-GLRPGGP 462
P G P + ++Y Q P MP Q Y + QQ+ P G+ P P
Sbjct: 464 P---MGQPPMYGAPMFYAQ--PNQMPMQGRQAYMYPQQMLPRGVHPRVP 507
>gi|71018821|ref|XP_759641.1| hypothetical protein UM03494.1 [Ustilago maydis 521]
gi|74701642|sp|Q4P8R9.1|PABP_USTMA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|46099399|gb|EAK84632.1| hypothetical protein UM03494.1 [Ustilago maydis 521]
Length = 651
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 265/599 (44%), Positives = 361/599 (60%), Gaps = 21/599 (3%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
N SLYVG+L+ +V E+ L+++FS + V S+RVCRD R SLGYAYVN+ N D A
Sbjct: 46 NTSLYVGELDPSVTEAMLFEIFSMIGTVASIRVCRDAVTRRSLGYAYVNFLNAADGERAM 105
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I +P RIM+S RDP++R++G GN+FIKNLD IDNKAL DTFAAFG +LSCK
Sbjct: 106 EQLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCK 165
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA + G S GYGFV +E EAA+ AIK +NGML+NDK+VYVG + R+ER +
Sbjct: 166 VATNETG-SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEETRA 224
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTNVY N+ VTD++ +K+F FG ITS ++ +D DGKS+ FGFVNF+ + A AV
Sbjct: 225 NFTNVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDEDGKSKGFGFVNFEDHNEAQKAV 284
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
++L+ + + +V RAQK++ERE +LR +E + + K +G NLYLKN+ +S +DE
Sbjct: 285 DELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDE 344
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
+L+E F+ FG ITSCK+M G S+G GF +S PEEA +A++EMNGKM+ +PLYVA+
Sbjct: 345 RLREEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVAL 404
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQA 444
AQRK+ R+ +L+AQ Q A+ GY GP +YY Q PG P Q
Sbjct: 405 AQRKDVRRQQLEAQIMQRNQLRLQQQAAAQGMGYP------GP-GMYYPQ--PGAFPGQP 455
Query: 445 AGYGFQQQVFP-GLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQG 503
G + + P G+ P G + PY Q G R + +
Sbjct: 456 GGMVPRPRYAPAGMMPQG-MPMAPYGQPGQFPAGMMPQGYRPARPPRGAPNAAGGPAPPA 514
Query: 504 IRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPV---PISTLTSALASASPDD 560
NG + PVP + MP P P P P + +ALA ASP++
Sbjct: 515 GARPPTGVNGAPRPAGQ--PVPGQP--MPRGPAARPAGRPEADQPGALTAAALAKASPEE 570
Query: 561 RTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
+ +MLGE +YP V +P A K+TGM+LE+ TE+LHL+E EAL KV EA+ VL+E
Sbjct: 571 QKQMLGEAIYPKVAASQPELAGKLTGMILELPVTELLHLLEESEALDAKVNEALEVLKE 629
>gi|291227649|ref|XP_002733794.1| PREDICTED: polyadenylate-binding protein 1-like [Saccoglossus
kowalevskii]
Length = 655
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/394 (54%), Positives = 278/394 (70%), Gaps = 11/394 (2%)
Query: 22 PSG--YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
PSG Y SLYVGDL +V E+ L++ FS ++S+RVCRD R SLGYAYVN+ P
Sbjct: 3 PSGPSYPMASLYVGDLHNDVTEAMLFEKFSSAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A +++NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD SIDNKA+ DTF+AF
Sbjct: 63 ADAERALDSMNFDVIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER-- 197
G +LSCKV D NG SKGYGFV F EEAA +I+ +NGML+N K+VYVG F+ R+ER
Sbjct: 123 GDILSCKVVCDENG-SKGYGFVHFATEEAANKSIEKVNGMLLNGKKVYVGKFMSRKERYD 181
Query: 198 AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQS 256
A KFTNV+V N + + DE L+++F +G I S VM+D G+++ FGFV F+
Sbjct: 182 AMGGQQKKFTNVFVKNFGDELDDEGLREMFERYGKIVSHKVMQDDHSGRNKGFGFVCFED 241
Query: 257 PDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
P A A + LN N ++ YVGRAQK+ ER+A+LR +FE + R + +G NLY+KN
Sbjct: 242 PIDAENACDDLNMKDINGRILYVGRAQKKIERQAELRNRFELMKAERANRYQGVNLYVKN 301
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
LDDS++DE+L++ F FGTITS KVM + G SKG GF FS PEEAT+A+ EMNG+++
Sbjct: 302 LDDSLDDERLRKEFMPFGTITSAKVM-SEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVS 360
Query: 377 RKPLYVAVAQRKEERKARLQAQFAQ----IRAPG 406
KPLYVA+AQRKE+RKA L +QF Q +R PG
Sbjct: 361 TKPLYVALAQRKEDRKAHLASQFMQRMSGLRLPG 394
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 61/92 (66%), Gaps = 4/92 (4%)
Query: 532 PATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEM 591
P V+ P P+ +S LA+A P ++ +MLGE+L+PL++ A K+TGMLLE+
Sbjct: 552 PQQSVQVPGQEPL----TSSMLAAAPPQEQKQMLGERLFPLIQLTHGELAGKITGMLLEI 607
Query: 592 DQTEVLHLIESPEALKTKVAEAMAVLQEAAAR 623
D +E+LH++ES E+L KV EA+AVL+ A+
Sbjct: 608 DNSELLHMLESRESLNAKVEEAVAVLKAHQAK 639
>gi|388854914|emb|CCF51417.1| probable PAB1-mRNA polyadenylate-binding protein [Ustilago hordei]
Length = 648
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 264/596 (44%), Positives = 363/596 (60%), Gaps = 15/596 (2%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVG+L+ +V E+ L+++F+ + V S+RVCRD R SLGYAYVN+ N D A E
Sbjct: 45 TSLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNFLNAADGERAME 104
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LN+ I +P RIM+S RDP++R++G GN+FIKNLD IDNKAL DTFAAFG +LSCKV
Sbjct: 105 QLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKV 164
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSPK 205
A + G S GYGFV +E EAA+ AIK +NGML+NDK+VYVG + R+ER + K
Sbjct: 165 ATNDTG-SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEESRAK 223
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
FTNVY N+ VTDE +K+F ++G ITS ++ +D DGKS+ FGFVNF+ + A AV+
Sbjct: 224 FTNVYCKNVDPEVTDEQFEKLFTNYGKITSCVLQRDDDGKSKGFGFVNFEDHEEAQKAVD 283
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
+L+ + + + +V RAQK++ERE +LR +E + + K +G NLYLKN+ +S +DE+
Sbjct: 284 ELHDSDFHGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDER 343
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L+E F+ FGTITSCK+M G S+G GF +S+PEEA +A++EMNGKM+ +PLYVA+A
Sbjct: 344 LREEFAPFGTITSCKIMRAPSGVSRGFGFVCYSVPEEANKAVSEMNGKMLDNRPLYVALA 403
Query: 386 QRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAA 445
QRK+ R+ +L+AQ Q A+ GY GP +YY Q PG P Q
Sbjct: 404 QRKDVRRQQLEAQIMQRNQLRLQQQAAAQGMGYP------GP-GMYYPQ--PGAFPGQPG 454
Query: 446 GYGFQQQVFP-GLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGI 504
G + + P G+ P G + PY Q G R + +
Sbjct: 455 GMVPRPRYAPAGMMPQG-MPMAPYGQPGQFPAGMMPQGYRPARPPRGAPNAAGGPAPPAG 513
Query: 505 RYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVP-VPISTLTSALASASPDDRTR 563
NG + VP G A P P+ V P + +ALA ASP+++ +
Sbjct: 514 ARPPAGVNGAPRPAGQPVPGQPMPRGPGARPAGRPQEVAGQPGTLTAAALAKASPEEQKQ 573
Query: 564 MLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
MLGE +YP V +P A K+TGM+LE+ TE+LHL+E EAL KV EA+ VL+E
Sbjct: 574 MLGEAIYPKVAASQPELAGKLTGMILELPVTELLHLLEEQEALDAKVNEALEVLKE 629
>gi|218192545|gb|EEC74972.1| hypothetical protein OsI_11001 [Oryza sativa Indica Group]
Length = 647
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 251/651 (38%), Positives = 371/651 (56%), Gaps = 44/651 (6%)
Query: 1 MEATGAAAATAAVTSATTAAVPSGYGNV-----SLYVGDLEQNVNESQLYDLFSQVAQVV 55
ME A A A + AVP+ G + +LYVGDL ++V E L ++F ++ +
Sbjct: 6 MEVMMVAMAAEAPVAVEVEAVPAAAGGLNATVPALYVGDLHESVREEHLLEVFGKIGTLT 65
Query: 56 SVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGY 115
SVRVCRD + +SL Y YVNY + DAA A E LN I KPIR+M+S+RDP R+SG
Sbjct: 66 SVRVCRDNATSNSLRYGYVNYLSQADAAIALEKLNHSLILDKPIRVMWSNRDPDARRSGV 125
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKM 175
GNVF+KNL+ +DN +L + F FG +LSCKVA + +G S+GYGFVQF +E+A +I+
Sbjct: 126 GNVFVKNLNDLVDNVSLQELFCKFGDILSCKVAKNEDGTSRGYGFVQFALQESADASIQN 185
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN +Q++V F+++ ER+ N K+TN+Y+ NL + +T+E +K F +G + S
Sbjct: 186 LNNSHFCGRQLHVATFIKKSERSTNN-DDKYTNLYMKNLDDDITEELIKLKFSQYGLVIS 244
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+MK DG S+ FGFV+FQ+P++A A E +NG K YV RAQK+AER+ L+
Sbjct: 245 VKIMKRDDGTSKGFGFVSFQNPESAKRAKESMNGMLLGSKTLYVARAQKKAERKQYLQCL 304
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
E++R K G+N+Y+KN++D + D+ L+E F+EFG ITS K+M D+ G SKG GF
Sbjct: 305 HEEKRNEIITKSNGSNVYIKNINDEVGDDALRERFNEFGNITSAKIMRDEKGISKGFGFV 364
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRA-PGGMSP-LAS 413
++ PEEA A++ M G M KPLYVA+AQRKEER+A+L+ +FA++ G SP + +
Sbjct: 365 CYNTPEEAKCAVSNMRGVMFYGKPLYVAIAQRKEERRAKLEQRFAELATMVGATSPVIPT 424
Query: 414 GIPGYHHGAPRLGPQQLYYGQGTPGLM-PPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQR 472
G P ++ P L G G M PP ++ +FP H +
Sbjct: 425 GYPQFYFAHP---STHLPQSPGRQGFMYPPIGISQEWRHNMFPS-----------SHNIQ 470
Query: 473 QVH-PGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVS--------MVP 523
Q+H P R R+ N M + + + Y+ +A+ + +S +P
Sbjct: 471 QIHSPIMRNTPRQYRNNRGRMNGNMM-HFHHTVNYVPHAQPAKEFMSMSRQRFSHAKYIP 529
Query: 524 VPFEVSGMPATPVETPRPVPVPISTLTSA----LASASPDDRTRMLGEQLYPLVENIEPV 579
+G+ ++ IS+L A LA+A P+++ MLG +LYPLVE P
Sbjct: 530 NDVMANGLAIHHGDS-------ISSLNDAFNNLLATAPPEEQKNMLGNRLYPLVERHHPD 582
Query: 580 HASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKL 630
ASK+TGMLLE+ +EV+ L+ S L K+ E + +LQE + + E L
Sbjct: 583 LASKITGMLLELGNSEVVMLLYSSNMLSAKIEECVKLLQEVKPKPEDQEAL 633
>gi|428673176|gb|EKX74089.1| polyadenylate-binding protein, putative [Babesia equi]
Length = 663
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 261/649 (40%), Positives = 372/649 (57%), Gaps = 65/649 (10%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y + SLYVGDL+ +V E+ LY++F+ V V S+RVCRD R SLGYAYVNY + QDA
Sbjct: 28 YNSASLYVGDLQPDVTEAILYEVFNSVGPVSSIRVCRDSITRKSLGYAYVNYYSVQDAEA 87
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A E+LN++ I G P RIM+S++DP++RKSG GN+F+KNLD SID KA DTF+ FG +LS
Sbjct: 88 ALESLNYIDIKGHPTRIMWSNKDPTLRKSGAGNIFVKNLDRSIDTKAFYDTFSHFGPILS 147
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA+D NG SKGYGFV ++ EE+A+ AI+ +NGM+I K+V V F+++Q+R +V
Sbjct: 148 CKVAMDENGVSKGYGFVHYDTEESAKEAIEKVNGMVIGGKKVEVSPFIKKQDRDPASVD- 206
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTN+YV N + +E LK+ +G ITS ++ +D GK R F FVNF P+ A AV
Sbjct: 207 VFTNLYVRNFPVSWDEEALKQFLDKYGEITSMMIKED--GKGRKFAFVNFAEPEMAKEAV 264
Query: 265 EKLNGTT--NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
E LNGT + V Q +A+R+A L++++ +NLY+KNLDDS
Sbjct: 265 EALNGTKLEEGSEPLLVCPHQDKAKRQAFLKSQYISGLDGSIASKASSNLYIKNLDDSFT 324
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE L+ELF +FG+ITSCK+M D G S+G GF FS PEEAT+A+ M+ K++ KPLYV
Sbjct: 325 DESLQELFGQFGSITSCKIMRDASGVSRGFGFVCFSRPEEATKAIAGMHLKIVKGKPLYV 384
Query: 383 AVAQRKEERKARLQAQFAQIRAPGGMS--PLAS---GIPGYHHGAPRLG----------- 426
+A++KE+R +RLQ Q ++ R M+ P+ S G+PGY + G
Sbjct: 385 GLAEKKEQRLSRLQ-QSSRSRNGDSMNQGPIPSVLHGVPGYQDASGFYGQGFRGGPQGVG 443
Query: 427 -----------------PQQLYYGQGTPGLMPPQAAGYGFQQ---QVFPGLRPGGPNYIM 466
P+ ++ G+P +PP AG Q + G++ G P+
Sbjct: 444 VPGRGVRMYPQSHIPVMPRNMHLSSGSP--LPPNNAGLSGMQGSPNLHSGMQ-GSPSLRS 500
Query: 467 PYHLQRQVHPGQRTGVRRSGNTH-------QMQQPQFMRNSN---QGIRYLDNARNGTDQ 516
+HPG + + N H + Q + M N G ++ ARN
Sbjct: 501 GLQGTPNIHPGIQVTPHGAPNIHPAMPTIPNVIQRRVMPTKNAPVSGFKFTAQARNREVG 560
Query: 517 SVVSMVPVPFEVS-GMPATPVETPRPVPVPISTLTSALASASPDD---RTRMLGEQLYPL 572
S +SM VP + GMP T P + A+ DD + +M+GE+L+P+
Sbjct: 561 STMSM-GVPMHPNMGMP-----TQAPGQQTMQPAMQGNATTHLDDTAFQKQMIGERLFPI 614
Query: 573 VENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAA 621
V P A K+TGM+LE+D E+L L+E LK K+ EA+ VL++A+
Sbjct: 615 VARDNPDLAGKITGMMLEIDNAELLALLEDDARLKAKIDEAIRVLKQAS 663
>gi|223590120|sp|A5DM21.2|PABP_PICGU RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|190347872|gb|EDK40224.2| hypothetical protein PGUG_04322 [Meyerozyma guilliermondii ATCC
6260]
Length = 631
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 255/599 (42%), Positives = 362/599 (60%), Gaps = 44/599 (7%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
LYVG+L +VNE+ L+++FS + QV S+RVCRD + SLGYAYVN+ D + A E L
Sbjct: 60 LYVGELNPSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEEL 119
Query: 90 NFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAI 149
N+ ++G+P RIM+S RDPS+R++G GN+FIKNL +IDNKAL DTF+AFG +LSCKVA
Sbjct: 120 NYSLVDGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFSAFGRILSCKVAT 179
Query: 150 DSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSPKFT 207
D GQSK +GFV +E EAA+ AI+ +NGML+ND++V+VG V +++R + + FT
Sbjct: 180 DELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDRESKFEEMKANFT 239
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NVYV NLA V + ++IF FG +TS + D +GKSR FGFVNF++ ++A AV+++
Sbjct: 240 NVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKSRGFGFVNFENHESALNAVKEM 299
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
N + + YVGRAQK+ ER +L+ +E R+ + K +G NL++KNLDDSI+ EKL+
Sbjct: 300 NDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLSKYQGVNLFVKNLDDSIDSEKLE 359
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
E F FGTITS +VMVD G SKG GF FS PEEAT+A+ EMN +MI KPLYVA+AQR
Sbjct: 360 EEFKPFGTITSARVMVDDAGKSKGFGFVCFSSPEEATKAITEMNQRMIQGKPLYVALAQR 419
Query: 388 KEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQA 444
K+ R+++L+ Q Q+R + A+G+PG + P ++YGQ PG PP
Sbjct: 420 KDVRRSQLEQQIQARNQMRMQNAAA--AAGMPGQF-----MSP--MFYGQ-QPGFFPPNG 469
Query: 445 AGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGI 504
G G Q G P P +MP Q+ P Q R N + P + G
Sbjct: 470 RG-GAQ-----GPFPPNPQMMMPRG--GQMPPPQGQWPRAGPNGQPV--PVYGMPPVYGG 519
Query: 505 RYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRM 564
+ N NG Q + P + G P L + +++ D + R+
Sbjct: 520 EF--NGPNGQRQQRGAYPPNRNQKGGRPQ-------------RDLAAIISTVPVDQQKRI 564
Query: 565 LGEQLYPLV----ENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
LGE+LYP + + EP A K+TGM+L+++ E+L L+E E + +A+ +E
Sbjct: 565 LGEELYPKIVATGKAQEPEAAGKITGMMLDLENEEILALLEDDELFENHFEDALTAFEE 623
>gi|242041385|ref|XP_002468087.1| hypothetical protein SORBIDRAFT_01g039310 [Sorghum bicolor]
gi|241921941|gb|EER95085.1| hypothetical protein SORBIDRAFT_01g039310 [Sorghum bicolor]
Length = 654
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 247/616 (40%), Positives = 352/616 (57%), Gaps = 34/616 (5%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
LYVGDL ++V E L+D FS++ V SVRVCRD + SL Y YVNY + DA A + L
Sbjct: 44 LYVGDLHEDVAEEHLFDAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVMALDKL 103
Query: 90 NFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAI 149
N + KPIR+M+S+RDP R+SG GN+F+KNL+ S+DN +L + F+ FG VLSCKVA
Sbjct: 104 NHSLVLDKPIRVMWSNRDPDARRSGVGNIFVKNLNNSVDNASLQELFSKFGDVLSCKVAK 163
Query: 150 DSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNV 209
+ +G S+GYGFVQF ++E+A AI LNG L ND++++V F+++ ER+ N KFTN+
Sbjct: 164 NEDGTSRGYGFVQFASQESADEAIGNLNGSLFNDRKLHVATFIKKSERSANN-DDKFTNL 222
Query: 210 YVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNG 269
Y+ +L + +T+E +K F FG I S +M+ DG S FGFV+FQ+P++A A E ++G
Sbjct: 223 YMKHLDDDITEELVKLKFSQFGPIVSVKIMRRPDGSSLGFGFVSFQNPESAIKAQETMHG 282
Query: 270 TTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKEL 329
K YV RAQK+ ER+ L+ E++R K +N+Y+KN+ D ++D+ L+
Sbjct: 283 MLLGSKALYVARAQKKEERKQYLQRLHEEKRNEIITKSNESNVYIKNIHDEVDDDALRAR 342
Query: 330 FSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKE 389
F+E+G ITS KVM D G S+G GF +S PEEA +N M G M KPLYVA+ QRKE
Sbjct: 343 FAEYGNITSAKVMRDDKGISRGFGFVCYSTPEEAKSVVNSMRGVMFFGKPLYVAIFQRKE 402
Query: 390 ERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYG-------QGTPG---L 439
ER+A+LQ FAQ+ G P S IP G Q+Y+ QG P +
Sbjct: 403 ERRAKLQQHFAQLARMVG--PTNSMIP--------TGYPQVYFAHPNAHIPQGPPRHGFV 452
Query: 440 MPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNT----HQMQQPQ 495
PP + ++ +FP P P P H G R GN H +
Sbjct: 453 YPPMGLSHEWRPNMFPSA-PNLPQIHSPMMPNSPRHYRSNRG-RMGGNMMPLPHAVHAMN 510
Query: 496 FMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMP-ATPVETPRPVPVPISTLTSALA 554
++ ++ ++ R + S F M + PV + +S LA
Sbjct: 511 YVTHAQPTKEFMSMPRQRFNHSKY------FSNDVMANGLAIHQSDPVSTMNDSFSSYLA 564
Query: 555 SASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAM 614
SA P ++ +LG +LYPLVE +P ASK+TGMLLE+D +EV+ L+ S E L KV E +
Sbjct: 565 SAPPAEQKNLLGNRLYPLVERHQPELASKITGMLLELDNSEVVTLLCSSEMLSVKVDECV 624
Query: 615 AVLQEAAARSDVNEKL 630
+LQ +++ +E L
Sbjct: 625 QLLQATKPKTEDHEAL 640
>gi|342879464|gb|EGU80711.1| hypothetical protein FOXB_08751 [Fusarium oxysporum Fo5176]
Length = 794
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 272/674 (40%), Positives = 375/674 (55%), Gaps = 95/674 (14%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD R SLGYAYVNY+ D A
Sbjct: 58 SASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATADGEKAL 117
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLD +IDNKAL DTFAAFG +LSCK
Sbjct: 118 EELNYTLIKGRPCRIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 177
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA D NG SKGYGFV +E +EAA AIK +NGML+N+K+VYVG + +++R + +
Sbjct: 178 VAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 237
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTNVYV N+A VT++D +++F FG +TS+ + +D +GKSR FGFVNF + ++A+ AV
Sbjct: 238 NFTNVYVKNIAPDVTEDDFRELFEKFGDVTSSSLARDQEGKSRGFGFVNFTTHESASKAV 297
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
+ LNG + + YVGRAQK+ ERE +LR +E R+ + K +G NLY+KNLDD ++D+
Sbjct: 298 DDLNGKDFHGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVDDD 357
Query: 325 KLKELFSEFGTITSCKVMVD---------------------------------------- 344
KL+++FSEFG ITS KVM +
Sbjct: 358 KLRQMFSEFGPITSAKVMRETPTEGDEDKKEETQDDKEKENKEEAKEEANEETKEGEEAK 417
Query: 345 ---------QHGFSKGSGFA--AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
K GF FS P++AT+A+ EMN +MI KPLYVA+AQRK+ RK+
Sbjct: 418 DDKKTEKKSDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMINNKPLYVALAQRKDVRKS 477
Query: 394 RLQAQFA---QIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQG-TPGLMPPQAAGYGF 449
+L+A Q+R + A+G+P + P +Y+ G PG MP G F
Sbjct: 478 QLEASIQARNQLRM--QQAAAAAGMPQQYMQPP------VYFAPGQQPGFMPQGGRGVPF 529
Query: 450 QQ--QVFPGLRPGGPNYIMPYHLQRQVHPGQRTGV--RRSGNTHQMQ-----------QP 494
Q PG++ G P Y Q G R GV + N + M P
Sbjct: 530 PQPGMGMPGVQGGRPGQFPGYPQQ-----GGRGGVPQQMPPNMYGMPGQFPPQFGQPGTP 584
Query: 495 QFMRNSNQ-----GIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTL 549
QFM G R G Q++ P+ ++G P + +
Sbjct: 585 QFMAAMQAQQAALGGRGAPQGGRGGPQNMPGGPPMAGGMAGFPPNNRQQGGRGGPGRNGN 644
Query: 550 T----SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEA 605
A P+ + ++LGE ++P ++ I A K+TGMLLEMD E+++LIE A
Sbjct: 645 APQGGRGAEGAGPNQK-QILGELIFPKIQAINGELAGKITGMLLEMDNAELVNLIEDDAA 703
Query: 606 LKTKVAEAMAVLQE 619
LK KV EA+AV E
Sbjct: 704 LKAKVDEALAVYDE 717
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 160/346 (46%), Gaps = 76/346 (21%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D++ S GY +V+Y + A
Sbjct: 144 NGQGNV--FIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSK-GYGFVHYETDEAA 200
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIR--------KSGYGNVFIKNLDTSIDNKALCD 134
+ A + +N M +N K ++ H P K+ + NV++KN+ + +
Sbjct: 201 SQAIKHVNGMLLNEK--KVYVGHHIPKKDRQSKFEEMKANFTNVYVKNIAPDVTEDDFRE 258
Query: 135 TFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRR 194
F FG V S +A D G+S+G+GFV F E+A A+ LNG + + +YVG ++
Sbjct: 259 LFEKFGDVTSSSLARDQEGKSRGFGFVNFTTHESASKAVDDLNGKDFHGQDLYVGRAQKK 318
Query: 195 QERAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMK-- 240
ER ++ + K+ N+Y+ NL + V D+ L+++F FG ITSA VM+
Sbjct: 319 HEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVDDDKLRQMFSEFGPITSAKVMRET 378
Query: 241 ----DSD---------------------------------------------GKSRCFGF 251
D D GKS+ FGF
Sbjct: 379 PTEGDEDKKEETQDDKEKENKEEAKEEANEETKEGEEAKDDKKTEKKSDKKLGKSKGFGF 438
Query: 252 VNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
V F +PD A AV ++N N+K YV AQ++ R++ L A +
Sbjct: 439 VCFSNPDDATKAVAEMNQRMINNKPLYVALAQRKDVRKSQLEASIQ 484
>gi|66800163|ref|XP_629007.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74996426|sp|Q54BM2.1|PAP1A_DICDI RecName: Full=Polyadenylate-binding protein 1-A; Short=PABP-1-A;
Short=Poly(A)-binding protein, cytoplasmic 1-A
gi|60462370|gb|EAL60591.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 565
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 255/595 (42%), Positives = 340/595 (57%), Gaps = 49/595 (8%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL V+E L+++F+QV V ++RVCRD + R SL YAYVNY N DA A +
Sbjct: 11 SLYVGDLLPEVSEQHLFEIFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNGADAERALDT 70
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LN PI GK RIM+S RDPS+RKSG GNVFIKNLD ID+KAL DTF+AFG +LSCKV
Sbjct: 71 LNNTPIRGKACRIMWSQRDPSLRKSGVGNVFIKNLDKGIDHKALYDTFSAFGNILSCKVV 130
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
D SKG+GFV +E +E+A AI +NGM+IN ++V+VG F +ER Q KFTN
Sbjct: 131 TDDGNSSKGFGFVHYETQESADKAIAKVNGMMINGQKVFVGPFKSSKERGQP-TEVKFTN 189
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+ NL+E V + LK++ +G IT+ +M D GKS+ FGF NF+S +AA VE N
Sbjct: 190 VFFKNLSEDVGPDQLKELLQQYGEITNITIMADDKGKSKGFGFANFESAEAAKNVVENEN 249
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G + K Y GRAQK+ EREA+L+ FE K +G NLY+KN+DDSI+++KL+E
Sbjct: 250 GKIFHGKPIYAGRAQKKIEREAELKHTFE-------TKYQGVNLYIKNIDDSIDNDKLRE 302
Query: 329 LFSEFGTITSCKVMVDQHG-FSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
+FS+FGTITS VM D SKG GF ++ P+EATRA+ EMNG+MIG KPLYVA+AQR
Sbjct: 303 VFSQFGTITSAIVMKDDKATTSKGFGFVCYTAPDEATRAVTEMNGRMIGTKPLYVALAQR 362
Query: 388 KEERKARLQAQFAQIRAPG---GMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQA 444
K+ R+A+L+ Q Q G M P P + AP + PQ +Y M P+
Sbjct: 363 KDIRRAQLEMQHQQKFKTGIRQQMPPTYGSGPVFFTPAP-VNPQVVYQ------QMMPRP 415
Query: 445 AGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGI 504
+ Q P + NY R R++G QP+
Sbjct: 416 RNWNGQPVGVPQGQYANMNYA-------------RGQPRQNGPRQNGGQPR--------- 453
Query: 505 RYLDNARNGTDQSVVSMVPVPF-EVSGMPATPVETPRPVPVPISTLTSALASASPDDRTR 563
+NG V P+P + + + + L S + S D +
Sbjct: 454 ------QNGPRPDVSGAQPIPVQQQTTLDVAQTQQAASSAESALNLQSIINLPSRDQQNV 507
Query: 564 MLGEQLYPLVENIEPVHASKVTGMLLE-MDQTEVLHLIESPEALKTKVAEAMAVL 617
LGE LYPL+ N +P A K+TGMLL+ + E+ L + + L K+ EA+ VL
Sbjct: 508 ALGEHLYPLIHNSQPDLAGKITGMLLDSLPVEELFTLTQRQDLLADKIREALEVL 562
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 17/203 (8%)
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG-KSRCFGFVNFQSPDA 259
N +P +++YV +L V+++ L +IF G +++ V +D++ +S + +VN+ +
Sbjct: 4 NFTPISSSLYVGDLLPEVSEQHLFEIFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNGAD 63
Query: 260 AAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDD 319
A A++ LN T K + +Q R+ LR K N+++KNLD
Sbjct: 64 AERALDTLNNTPIRGKACRIMWSQ----RDPSLR------------KSGVGNVFIKNLDK 107
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
I+ + L + FS FG I SCKV+ D SKG GF + E A +A+ ++NG MI +
Sbjct: 108 GIDHKALYDTFSAFGNILSCKVVTDDGNSSKGFGFVHYETQESADKAIAKVNGMMINGQK 167
Query: 380 LYVAVAQRKEERKARLQAQFAQI 402
++V + +ER + +F +
Sbjct: 168 VFVGPFKSSKERGQPTEVKFTNV 190
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LY+ +++ +++ +L ++FSQ + S V +D +S G+ +V Y+ P +A
Sbjct: 281 YQGVNLYIKNIDDSIDNDKLREVFSQFGTITSAIVMKDDKATTSKGFGFVCYTAPDEATR 340
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKS 113
A +N I KP+ + + R IR++
Sbjct: 341 AVTEMNGRMIGTKPLYVALAQRK-DIRRA 368
>gi|383417509|gb|AFH31968.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 456
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/379 (56%), Positives = 272/379 (71%), Gaps = 7/379 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK + FG S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKDL---FGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 243
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 244 AVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 303
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM+ + G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 304 DERLRKEFSPFGTITSAKVMM-EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 362
Query: 383 AVAQRKEERKARLQAQFAQ 401
A+AQRKEER+A L Q+ Q
Sbjct: 363 ALAQRKEERQAHLTNQYMQ 381
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 165/299 (55%), Gaps = 28/299 (9%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ ++ +L+++++ LYD FS ++S +V D++ S GY +V++ + A
Sbjct: 96 SGVGNI--FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAA 151
Query: 83 ANAKEALNFMPINGKPIRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDTF 136
A E +N M +N + + + R+ + R + NV+IKN +D++ L D F
Sbjct: 152 ERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLF 211
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
G LS KV D +G+SKG+GFV FE E AQ A+ +NG +N KQ+YVG ++ E
Sbjct: 212 ---GPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 268
Query: 197 RAQQNVSPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
R Q + KF N+YV NL + + DE L+K F FGTITSA VM +
Sbjct: 269 R-QTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG- 326
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
G+S+ FGFV F SP+ A AV ++NG K YV AQ++ ER+A L ++ Q S
Sbjct: 327 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMAS 385
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LK+LF G S KVM D+
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKDLF---GPALSVKVMTDE 223
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 224 SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 281
>gi|324509105|gb|ADY43836.1| Polyadenylate-binding protein 1, partial [Ascaris suum]
Length = 661
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/381 (53%), Positives = 275/381 (72%), Gaps = 4/381 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 16 YPMASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAER 75
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF + GKPIRIM+S RDPS+R+SG GN+FIKNLD SIDNKA+ DTF+ FG +LS
Sbjct: 76 ALDTMNFDVMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFGNILS 135
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKVA D SKGYGFV FE EE+AQ AI+ +NGML+ K+VYVG F R R ++
Sbjct: 136 CKVANDEESNSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGKFQPRAARMREMGET 195
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNV++ N A+ + E L+K+F FG ITS VM D+DGKS+ FGFV F++P+ A
Sbjct: 196 ARRFTNVFIKNFADELDKEKLEKLFAKFGKITSCAVMSDADGKSKGFGFVAFENPEDAEK 255
Query: 263 AVEKLN--GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
AV +++ ++++ YV RAQK+ ER A+L+ ++EQ+++ R ++ +G NLY+KNLDD+
Sbjct: 256 AVNEMHEYQLPDSERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDT 315
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
++DE L++ F +G ITS KVM D +G SKG GF F P+EAT+A+ EMNGKM+ KPL
Sbjct: 316 VDDEVLRQNFESYGKITSAKVMCDDNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPL 375
Query: 381 YVAVAQRKEERKARLQAQFAQ 401
YVA+AQRKE+RKA+L +Q+ Q
Sbjct: 376 YVALAQRKEDRKAQLASQYMQ 396
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 168/296 (56%), Gaps = 23/296 (7%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ ++ +L+++++ +YD FS ++S +V D+ S GY +V++ + A
Sbjct: 104 SGAGNI--FIKNLDKSIDNKAIYDTFSMFGNILSCKVANDEESNSK-GYGFVHFETEESA 160
Query: 83 ANAKEALNFMPINGKPIRI-MYSHRDPSIRKSG-----YGNVFIKNLDTSIDNKALCDTF 136
A E +N M + GK + + + R +R+ G + NVFIKN +D + L F
Sbjct: 161 QKAIEKVNGMLLEGKKVYVGKFQPRAARMREMGETARRFTNVFIKNFADELDKEKLEKLF 220
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND--KQVYVGLFVRR 194
A FG + SC V D++G+SKG+GFV FEN E A+ A+ ++ + D +++YV ++
Sbjct: 221 AKFGKITSCAVMSDADGKSKGFGFVAFENPEDAEKAVNEMHEYQLPDSERKLYVCRAQKK 280
Query: 195 QERA--------QQNVSP----KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
ER+ QQ V + N+YV NL +TV DE L++ F +G ITSA VM D
Sbjct: 281 NERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVDDEVLRQNFESYGKITSAKVMCDD 340
Query: 243 DGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+G+S+ FGFV F+ PD A AV ++NG K YV AQ++ +R+A L +++ Q
Sbjct: 341 NGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVALAQRKEDRKAQLASQYMQ 396
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 553 LASASPDDRTRMLGEQLYPLVENI-EPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVA 611
LA A P ++ +MLGE++YPL+E I + K+TGM+LEMD +E+L ++E+ E L++KV+
Sbjct: 588 LAQALPQEQKQMLGERIYPLIERIYQGPDVGKITGMMLEMDNSELLMMLENEELLQSKVS 647
Query: 612 EAMAVLQEA 620
EA +VL A
Sbjct: 648 EAASVLASA 656
>gi|50547639|ref|XP_501289.1| YALI0C00539p [Yarrowia lipolytica]
gi|74689742|sp|Q6CDH3.1|PABP_YARLI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49647156|emb|CAG81584.1| YALI0C00539p [Yarrowia lipolytica CLIB122]
Length = 629
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 248/620 (40%), Positives = 359/620 (57%), Gaps = 70/620 (11%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
N SLYVG+L+ +V E+ L+++F+ + V SVRVCRD R SLGYAYVN+ N D A
Sbjct: 45 NASLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDAITRRSLGYAYVNFHNQADGIRAL 104
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ PI +P RIM+S RDP++RK+G GN++IKNLD +IDNKAL DTF+AFG +LSCK
Sbjct: 105 EELNYSPIKERPCRIMWSQRDPALRKTGAGNIYIKNLDPAIDNKALHDTFSAFGQILSCK 164
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK- 205
+A D G S+G+GFV +E+ E+A++AI+ +NGML+NDK+V+VG V + +R Q K
Sbjct: 165 IATDEFGNSRGFGFVHYESAESAESAIQHVNGMLLNDKKVFVGPHVPKSDRMQSFEEQKN 224
Query: 206 -FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTNV++ NL +T+ + +++ FG +S + + +GK FGFV+++ D A A+
Sbjct: 225 SFTNVFIKNLGTEITEAEFEELVNKFGETSSVHLSTNDEGKPTGFGFVDYKEHDVAVKAI 284
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
+ L+ T + GRA+K+ ER +LR ++E R+ + K +G NLY+KNLDD+I+D+
Sbjct: 285 DGLSETEFKGNKLFAGRAKKKYERADELRKQYEASRLEKLNKYQGVNLYIKNLDDTIDDD 344
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KL+ F+ GTITS KVMVD+ G SKG GF +S PEEAT+A+ EMN +++ KPLYV +
Sbjct: 345 KLRAEFAPHGTITSAKVMVDEAGKSKGFGFVCYSSPEEATKAVTEMNHRLVAGKPLYVVL 404
Query: 385 AQRKEERKARLQAQFAQIRAPGGM----SPLASGIPGYHHGAPRLGPQQLYYGQGTPGLM 440
AQRK+ R+++LQ QI+A M A G+PG + G P + Y GQ PG M
Sbjct: 405 AQRKDVRRSQLQ---QQIQAKNQMRLQQQAAAGGLPGQYMGNPGV----FYPGQ--PGFM 455
Query: 441 PPQAAGYGF--------------QQQVFPGLRPGGPNYIM--PYHLQRQVHPGQRTGVRR 484
PP G F Q Q P PGGPN P Q+ P Q G R
Sbjct: 456 PPGRGGMPFGANPQMMMRPPMPPQNQFPPRGVPGGPNMYGAPPQGYQQGGFPPQ--GPMR 513
Query: 485 SGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPV 544
G + QP QG ++ R +S V+
Sbjct: 514 GGQPPRSGQP-----GPQG-QFRGAPRRKDGESRVA------------------------ 543
Query: 545 PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVH-----ASKVTGMLLEMDQTEVLHL 599
++++AL +A + +++GE LYP V + + A K+TGMLLEM E+L +
Sbjct: 544 --DSISNALENAPEEQHKQLVGEALYPKVLAEKAIDGNAEFAGKITGMLLEMPIKEILEV 601
Query: 600 IESPEALKTKVAEAMAVLQE 619
I+ E L+ ++ +A+ E
Sbjct: 602 IDDEEGLQAQINDAITAYNE 621
>gi|170574509|ref|XP_001892845.1| polyadenylate-binding protein 4 [Brugia malayi]
gi|158601405|gb|EDP38326.1| polyadenylate-binding protein 4, putative [Brugia malayi]
Length = 462
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/395 (53%), Positives = 280/395 (70%), Gaps = 5/395 (1%)
Query: 11 AAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLG 70
A V +A PS Y SLYVGDL +V E+ L++ FS V+S+RVCRD R SLG
Sbjct: 2 ATVATAGVGMTPS-YPMASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLG 60
Query: 71 YAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNK 130
YAYVN+ P DA A + +NF + GKPIRIM+S RDPS+R+SG GN+FIKNLD SIDNK
Sbjct: 61 YAYVNFQQPADAERALDTMNFDMMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNK 120
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
A+ DTF+ FG +LSCKVA D SKGYGFV FE EE+AQ AI+ +NGML+ K+VYVG
Sbjct: 121 AIYDTFSMFGNILSCKVANDEELNSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGK 180
Query: 191 FVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRC 248
F R R ++ + +FTNVY+ N A+ + E L+K+F FG ITSA VM D+DGKS+
Sbjct: 181 FQPRMARLREMGETTRRFTNVYIKNFADELDKEALEKLFFKFGKITSAAVMVDADGKSKG 240
Query: 249 FGFVNFQSPDAAAAAVEKLNGTT--NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK 306
FGFV F++P+ A AV +++ ++ YV RAQK+ ER A+L+ ++EQ+++ R ++
Sbjct: 241 FGFVAFENPEDAEKAVTEMHEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQR 300
Query: 307 LKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRA 366
+G NLY+KNLDD++ND+ LK+ F +G ITS KVM D +G SKG GF F P+EAT+A
Sbjct: 301 YQGVNLYVKNLDDTVNDDILKQNFEAYGKITSAKVMCDDNGRSKGFGFVCFEKPDEATKA 360
Query: 367 LNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ 401
+ EMNGKM+ KPLYVA+AQRKE+RKA+L +Q+ Q
Sbjct: 361 VTEMNGKMMCTKPLYVALAQRKEDRKAQLASQYMQ 395
>gi|403417917|emb|CCM04617.1| predicted protein [Fibroporia radiculosa]
Length = 671
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/452 (49%), Positives = 298/452 (65%), Gaps = 26/452 (5%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVG+L+ V E+ L+++F+ + V S+RVCRD R SLGYAYVNY N D A E
Sbjct: 45 SLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 104
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LN+ I G+ RIM+S RDP++RK+G GN+FIKNLD IDNKAL DTFAAFG VLSCKVA
Sbjct: 105 LNYSSIKGRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVA 164
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSPKF 206
D +G+SKGYGFV +E EAA+ AIK +NGML+NDK+VYVG + R+ER + + +F
Sbjct: 165 TDEHGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGYHISRKERQSKLEEMKAQF 224
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TN+YV N VT+E+ +F FG++TSA++ +D +G+SR FGFVNF+ D A AVE
Sbjct: 225 TNIYVKNFDPEVTEEEFMALFQQFGSVTSAVIQRDDEGRSRGFGFVNFEVHDEAQKAVEG 284
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
L+ K +V RAQK+AERE +LR +EQ ++ + K +G NLY+KNL+D ++D++L
Sbjct: 285 LHDLDFKGKKLFVSRAQKKAEREQELRQSYEQAKMEKMSKFQGVNLYIKNLEDDLDDDRL 344
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
+ F FG+ITS KVM D+ G SKG GF FS P+EAT+A+ EMN KMIG KPLYV++AQ
Sbjct: 345 RTEFEPFGSITSAKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLAQ 404
Query: 387 RKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYY-------------- 432
R++ R+ +L++Q AQ ASG+ G + P +YY
Sbjct: 405 RRDVRRQQLESQIAQRNQIRMQQAAASGLAGGYINGP------MYYPPGPGGFPPQGGRG 458
Query: 433 --GQGTPGLMPPQAAGYGFQQQVFPGLRPGGP 462
G G PG+MPP+ Y QV PG+ GP
Sbjct: 459 MMGYGQPGMMPPRPR-YAPNGQV-PGMPLPGP 488
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 4/101 (3%)
Query: 533 ATPVETPRPVPVPIST---LTSAL-ASASPDDRTRMLGEQLYPLVENIEPVHASKVTGML 588
A V +P PVP + ++SAL A+ASP ++ +MLGE +Y + P A K+TGML
Sbjct: 571 AGQVPSPGGAPVPGAEAPGISSALLANASPMEQKQMLGEVIYMKIAPAHPDLAGKITGML 630
Query: 589 LEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEK 629
LEMD E+LHL++ E++ KV EA+ VL E + + V K
Sbjct: 631 LEMDNAELLHLLDDQESMNNKVNEALVVLHEFSQKEVVESK 671
>gi|146415246|ref|XP_001483593.1| hypothetical protein PGUG_04322 [Meyerozyma guilliermondii ATCC
6260]
Length = 631
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 255/599 (42%), Positives = 362/599 (60%), Gaps = 44/599 (7%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
LYVG+L +VNE+ L+++FS + QV S+RVCRD + SLGYAYVN+ D + A E L
Sbjct: 60 LYVGELNPSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEEL 119
Query: 90 NFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAI 149
N+ ++G+P RIM+S RDPS+R++G GN+FIKNL +IDNKAL DTF+AFG +LSCKVA
Sbjct: 120 NYSLVDGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFSAFGRILSCKVAT 179
Query: 150 DSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSPKFT 207
D GQSK +GFV +E EAA+ AI+ +NGML+ND++V+VG V +++R + + FT
Sbjct: 180 DELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDRESKFEEMKANFT 239
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NVYV NLA V + ++IF FG +TS + D +GKSR FGFVNF++ ++A AV+++
Sbjct: 240 NVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKSRGFGFVNFENHESALNAVKEM 299
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
N + + YVGRAQK+ ER +L+ +E R+ + K +G NL++KNLDDSI+ EKL+
Sbjct: 300 NDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLLKYQGVNLFVKNLDDSIDSEKLE 359
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
E F FGTITS +VMVD G SKG GF FS PEEAT+A+ EMN +MI KPLYVA+AQR
Sbjct: 360 EEFKPFGTITSARVMVDDAGKSKGFGFVCFSSPEEATKAITEMNQRMIQGKPLYVALAQR 419
Query: 388 KEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQA 444
K+ R+++L+ Q Q+R + A+G+PG + P ++YGQ PG PP
Sbjct: 420 KDVRRSQLEQQIQARNQMRMQNAAA--AAGMPGQF-----MLP--MFYGQ-QPGFFPPNG 469
Query: 445 AGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGI 504
G G Q G P P +MP Q+ P Q R N + P + G
Sbjct: 470 RG-GAQ-----GPFPPNPQMMMPRG--GQMPPPQGQWPRAGPNGQPV--PVYGMPPVYGG 519
Query: 505 RYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRM 564
+ N NG Q + P + G P L + +++ D + R+
Sbjct: 520 EF--NGPNGQRQQRGAYPPNRNQKGGRPQ-------------RDLAAIISTVPVDQQKRI 564
Query: 565 LGEQLYPLV----ENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
LGE+LYP + + EP A K+TGM+L+++ E+L L+E E + +A+ +E
Sbjct: 565 LGEELYPKIVATGKAQEPEAAGKITGMMLDLENEEILALLEDDELFENHFEDALTAFEE 623
>gi|361128049|gb|EHL00002.1| putative Polyadenylate-binding protein, cytoplasmic and nuclear
[Glarea lozoyensis 74030]
Length = 783
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 241/527 (45%), Positives = 315/527 (59%), Gaps = 68/527 (12%)
Query: 18 TAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYS 77
++AVP + SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD R SLGYAYVNY+
Sbjct: 52 SSAVPHPQASASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYN 111
Query: 78 NPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFA 137
D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLDT+IDNKAL DTFA
Sbjct: 112 TTTDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFA 171
Query: 138 AFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
AFG +LSCKVA D +G SKGYGFV +E +EAA AIK +NGML+N+K+V+VG + +++R
Sbjct: 172 AFGNILSCKVAQDESGASKGYGFVHYETDEAASQAIKHVNGMLLNEKKVFVGHHIPKKDR 231
Query: 198 AQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFGFVNF 254
+ + FTN+YV N+ TDE+ +++F FG +TSA + +D D GKSR FGFVNF
Sbjct: 232 QSKFEEMKANFTNIYVKNIPVEATDEEFRELFEKFGDVTSASLARDQDTGKSRGFGFVNF 291
Query: 255 QSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYL 314
+ + AA AV++LNG + YVGRAQK+ ERE +LR +E RI + K +G NLY+
Sbjct: 292 INHEHAATAVDELNGKDFKGQDLYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYV 351
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQH---------------------------- 346
KNLDD ++DEKL+ELF+ FG ITS KVM D
Sbjct: 352 KNLDDDVDDEKLRELFTPFGAITSAKVMRDSAAETAEAEKKEEEKNKENKKEGDAEEGEK 411
Query: 347 ----------------GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEE 390
G SKG GF FS P+EAT+A+ +MN M+ KPLYVA+AQRK+
Sbjct: 412 ADGEKKEAPKSEKRTVGKSKGFGFVCFSNPDEATKAIADMNQNMVNGKPLYVALAQRKDV 471
Query: 391 RKARLQAQFA---QIR-----APGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPP 442
RK +L+A QIR A GM P P ++ + G G+G P PP
Sbjct: 472 RKGQLEASIQARNQIRMQQAAAQAGMPPQYMQAPMFYPPGQQPGFMPAAGGRGMP--YPP 529
Query: 443 QAA----GYGFQQQVFPGLRP-----GGPNYIMP--YHLQRQVHPGQ 478
QA G + FPG P GGP + P Y + Q PGQ
Sbjct: 530 QAGMPMPAQGGRPAQFPGGFPPQGGRGGPQQMPPNMYGIPGQFPPGQ 576
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 50/73 (68%)
Query: 547 STLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEAL 606
S L + LA+A P + ++LGE L+P ++ ++P A K+TGMLLEM+ E+++LIE AL
Sbjct: 685 SVLQAQLAAAGPGQQKQVLGEALFPKIQAMQPELAGKITGMLLEMENPELVNLIEDESAL 744
Query: 607 KTKVAEAMAVLQE 619
+ KV EA+ V E
Sbjct: 745 RNKVDEALTVYDE 757
>gi|115452253|ref|NP_001049727.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|108707490|gb|ABF95285.1| polyadenylate binding protein, types 1, 2, 3, 4 family protein,
expressed [Oryza sativa Japonica Group]
gi|113548198|dbj|BAF11641.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|215678518|dbj|BAG92173.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624669|gb|EEE58801.1| hypothetical protein OsJ_10348 [Oryza sativa Japonica Group]
Length = 647
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 250/651 (38%), Positives = 371/651 (56%), Gaps = 44/651 (6%)
Query: 1 MEATGAAAATAAVTSATTAAVPSGYGNV-----SLYVGDLEQNVNESQLYDLFSQVAQVV 55
ME A A A + AVP+ G + +LYVGDL ++V E L ++F ++ +
Sbjct: 6 MEVMMVAMAAEAPVAVEVEAVPAVAGGLNATVPALYVGDLHESVREEHLLEVFGKIGTLT 65
Query: 56 SVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGY 115
SVRVCRD + +SL Y YVNY + DAA A E LN I KPIR+M+S+RDP R+SG
Sbjct: 66 SVRVCRDNATSNSLRYGYVNYLSQADAAIALEKLNHSLILDKPIRVMWSNRDPDARRSGV 125
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKM 175
GNVF+KNL+ +DN +L + F FG +LSCKVA + +G S+GYGFVQF +E+A +I+
Sbjct: 126 GNVFVKNLNDLVDNVSLQELFCKFGDILSCKVAKNEDGTSRGYGFVQFALQESADASIQN 185
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN +Q++V F+++ ER+ N K+TN+Y+ NL + +T+E +K F +G + S
Sbjct: 186 LNNSHFCGRQLHVATFIKKSERSTNN-DDKYTNLYMKNLDDDITEELIKLKFSQYGLVIS 244
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+MK DG S+ FGFV+FQ+P++A A E +NG K YV RAQK+AER+ L+
Sbjct: 245 VKIMKRDDGTSKGFGFVSFQNPESAKRAKESMNGMLLGSKTLYVARAQKKAERKQYLQRL 304
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
E++R K G+N+Y+KN++D + D+ L+E F+EFG ITS K+M D+ G SKG GF
Sbjct: 305 HEEKRNEIITKSNGSNVYIKNINDEVGDDALRERFNEFGNITSAKIMRDEKGISKGFGFV 364
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRA-PGGMSP-LAS 413
++ PEEA A++ M G M KPLYVA+AQRKEER+A+L+ +FA++ G SP + +
Sbjct: 365 CYNTPEEAKCAVSNMRGVMFYGKPLYVAIAQRKEERRAKLEQRFAELATMVGATSPVIPT 424
Query: 414 GIPGYHHGAPRLGPQQLYYGQGTPGLM-PPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQR 472
G P ++ P L G G M PP ++ +FP H +
Sbjct: 425 GYPQFYFAHP---STHLPQSPGRQGFMYPPIGISQEWRHNMFPS-----------SHNIQ 470
Query: 473 QVH-PGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVS--------MVP 523
Q+H P R R+ N M + + + Y+ +A+ + +S +P
Sbjct: 471 QIHSPIMRNTPRQYRNNRGRMNGNMM-HFHHTVNYVPHAQPAKEFMSMSRQRFSHAKYIP 529
Query: 524 VPFEVSGMPATPVETPRPVPVPISTLTSA----LASASPDDRTRMLGEQLYPLVENIEPV 579
+G+ ++ IS++ A LA+A P+++ MLG +LYPLVE P
Sbjct: 530 NDIMANGLAIHHGDS-------ISSMNDAFNNLLATAPPEEQKNMLGNRLYPLVERHHPD 582
Query: 580 HASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKL 630
ASK+TGMLLE+ +EV+ L+ S L K+ E + +LQE + + E L
Sbjct: 583 LASKITGMLLELGNSEVVMLLYSSNMLSAKIEECVKLLQEVKPKPEDQEAL 633
>gi|358386241|gb|EHK23837.1| hypothetical protein TRIVIDRAFT_169516 [Trichoderma virens Gv29-8]
Length = 747
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/511 (45%), Positives = 312/511 (61%), Gaps = 63/511 (12%)
Query: 3 ATGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRD 62
A A A A+ + TTA P + SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD
Sbjct: 36 AVSAGAEDASAPTPTTAPHPQN--SASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRD 93
Query: 63 QSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKN 122
R SLGYAYVNY++ D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKN
Sbjct: 94 AVTRRSLGYAYVNYNSTPDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKN 153
Query: 123 LDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIN 182
LD +IDNKAL DTFAAFG +LSCKVA D NG SKGYGFV +E +EAA AIK +NGML+N
Sbjct: 154 LDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLN 213
Query: 183 DKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMK 240
+K+VYVG + +++R + + FTNVYV N+ VTD++ +++F FG +TS+ + +
Sbjct: 214 EKKVYVGYHIPKKDRQSKFEEMKANFTNVYVKNIGPDVTDDEFRELFEKFGDVTSSSLAR 273
Query: 241 DSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQER 300
D +GK R FGFVNF + +AA AVE LNG + YVGRAQK+ ERE +LR +E R
Sbjct: 274 DQEGKPRGFGFVNFTTHEAAFKAVEDLNGKDFRGQELYVGRAQKKHEREEELRKSYEAAR 333
Query: 301 ISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH-------------- 346
+ + K +G NLY+KNLDD ++DEKL+++F+EFG ITS KVM D
Sbjct: 334 LEKANKYQGVNLYIKNLDDDVDDEKLRQMFAEFGPITSAKVMRDTPQEGEEEVKDQEKDK 393
Query: 347 ----------------------------GFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
G SKG GF FS P++AT+A+ EMN +MI K
Sbjct: 394 ENQKEAENEAESAESAEKKAEKKSDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMINNK 453
Query: 379 PLYVAVAQRKEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQG 435
PLYVA+AQRK+ RK++L+A Q+R + A+G+P + P ++Y G
Sbjct: 454 PLYVALAQRKDVRKSQLEASIQARNQLRM--QQAAAAAGMPQQYMQPP------VFYAPG 505
Query: 436 -TPGLMPPQAAGYGFQQQVFP-----GLRPG 460
PG +P G F Q P G RPG
Sbjct: 506 QQPGFIPQGGRGMPFPQPGMPLPNVQGGRPG 536
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 564 MLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
+LGE ++P ++ I A K+TGMLLEMD +E+++LIE ALK KV EA+AV E
Sbjct: 674 ILGELIFPKIQAINAELAGKITGMLLEMDNSELVNLIEDEAALKAKVDEALAVYDE 729
>gi|358334962|dbj|GAA31742.2| polyadenylate-binding protein, partial [Clonorchis sinensis]
Length = 738
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/383 (51%), Positives = 263/383 (68%), Gaps = 5/383 (1%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL E+ LY FS++ V+S R+CRD + R+SLGY YVN+ P+DA A E
Sbjct: 1 TSLYVGDLHPLATEALLYSKFSEIGTVLSARICRDLATRNSLGYGYVNFEEPKDAERALE 60
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LN+ G+PIRIM+S RDPS+RKSG GN+FIKNLD +ID K L DTF+ G +LSCK+
Sbjct: 61 NLNYESFMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKTIDQKQLYDTFSFIGKILSCKI 120
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A+D +G SKGYGFV FE EE A+ AI+ +NGM+IND+ VYVG F+ +R + +F
Sbjct: 121 AMDEHGNSKGYGFVHFEKEECAERAIEKINGMMINDRVVYVGKFIPSSDRKSASGKLRFN 180
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
N+YV N TDE L+ +F FG I S V K+ +GKS+ FGFV F PD A AV +
Sbjct: 181 NIYVKNFPPDTTDEKLRDMFSEFGEIKSCCVEKNPEGKSKGFGFVCFHDPDHAEQAVRVM 240
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK-LKGANLYLKNLDDSINDEKL 326
+G N + Y RAQ++ ER+ +L+ + E++R R K + G NLY+KNLDD+I+DE+L
Sbjct: 241 HGKEINGRALYASRAQRKEERQEELKQRLEKQRAERLSKYVPGVNLYVKNLDDNIDDERL 300
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
KE FS +G ITS KVM D +G SKG GF F+ PE+A RA+ EMN ++G KPLYVA+AQ
Sbjct: 301 KEAFSHYGPITSAKVMTDANGRSKGFGFVCFTQPEQAARAVTEMNATLVGSKPLYVALAQ 360
Query: 387 RKEERKARL----QAQFAQIRAP 405
RKE+R+A+L Q + AQ R+P
Sbjct: 361 RKEDRRAKLIAEHQQRLAQYRSP 383
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 187/637 (29%), Positives = 308/637 (48%), Gaps = 85/637 (13%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ ++ +L++ +++ QLYD FS + +++S ++ D+ S GY +V++ + A
Sbjct: 86 SGKGNI--FIKNLDKTIDQKQLYDTFSFIGKILSCKIAMDEHGNSK-GYGFVHFEKEECA 142
Query: 83 ANAKEALNFMPINGKPIR----IMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAA 138
A E +N M IN + + I S R + K + N+++KN ++ L D F+
Sbjct: 143 ERAIEKINGMMINDRVVYVGKFIPSSDRKSASGKLRFNNIYVKNFPPDTTDEKLRDMFSE 202
Query: 139 FGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA 198
FG + SC V + G+SKG+GFV F + + A+ A+++++G IN + +Y R++ER
Sbjct: 203 FGEIKSCCVEKNPEGKSKGFGFVCFHDPDHAEQAVRVMHGKEINGRALYASRAQRKEER- 261
Query: 199 QQNVSPKF--------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG 244
Q+ + + N+YV NL + + DE LK+ F H+G ITSA VM D++G
Sbjct: 262 QEELKQRLEKQRAERLSKYVPGVNLYVKNLDDNIDDERLKEAFSHYGPITSAKVMTDANG 321
Query: 245 KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRY 304
+S+ FGFV F P+ AA AV ++N T K YV AQ++ +R A L A+ Q+R+++Y
Sbjct: 322 RSKGFGFVCFTQPEQAARAVTEMNATLVGSKPLYVALAQRKEDRRAKLIAE-HQQRLAQY 380
Query: 305 EKLKGANLYLKNLDDSINDEKLKELFSE---FGTITSCKVMVDQHGFSKGSGFAAFSMPE 361
L + F + + TS V+ Q +++ + + MP
Sbjct: 381 RSPVTQMLPAAAAHAAAPSYFPPTAFPQAQRYYHPTSA-VISSQPRWNRAAAMSG-GMPA 438
Query: 362 EATRALNEMNGKMIGRKPL---YVAVAQRKEERKARLQAQFAQIRAPGGMS--------- 409
++ G + R P+ Y+ A A A +R+P G+
Sbjct: 439 -------QLGGGVSARPPMPTQYIGAPNPAAGVAANQMATMAHLRSPAGVGRPIVPNAMS 491
Query: 410 --PLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQA----AGYGFQQQVFPGLRPGGPN 463
P A +PG P G +Q G PG+ Q AG Q+ + GGPN
Sbjct: 492 AMPTAPHMPGSAMMNPAAGQRQ---SAGRPGVPMQQVMTGPAGGIPQRPSMASVVAGGPN 548
Query: 464 Y--IMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSM 521
+ P + +HP SGN +R+ ARN + Q +
Sbjct: 549 VRPVAPQVPRNVMHPSMGAMPGASGN----------------VRFNQTARNVSTQPTTAP 592
Query: 522 VPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHA 581
+P ++ P+ P+ + SALA S +D+ R LGE+L+PLV+ + P A
Sbjct: 593 GNMPSVLA-----PLGDQSPLTI------SALAQLSEEDQKRTLGERLFPLVQEMYPTLA 641
Query: 582 SKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
K+TGMLL +D EV+HL+ES E+L+ K+ E ++VL+
Sbjct: 642 QKLTGMLLGVDNAEVIHLLESKESLRAKLEEGISVLK 678
>gi|341900148|gb|EGT56083.1| hypothetical protein CAEBREN_04295 [Caenorhabditis brenneri]
Length = 649
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 250/505 (49%), Positives = 322/505 (63%), Gaps = 29/505 (5%)
Query: 1 MEATGAAAATAAVTSATTAAVPSG--YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVR 58
M A A A + P+G Y SLYVGDL +VNES L++ FS V+S+R
Sbjct: 3 MNAATPAVAVPGAGAPQPGQNPTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIR 62
Query: 59 VCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNV 118
VCRD + R SLGYAYVN+ P DA A + +NF ++GKP+RIM+S RDP++R+SG GN+
Sbjct: 63 VCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNI 122
Query: 119 FIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNG 178
FIKNLD IDNK++ DTF+ FG +LSCKVAID G SKGYGFV FE EEAAQNAI+ +NG
Sbjct: 123 FIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEEGSSKGYGFVHFETEEAAQNAIQKVNG 182
Query: 179 MLINDKQVYVGLFVRRQERAQQN-----VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTI 233
ML+ K+V+VG F Q RAQ+N + K+TNVYV N + E L+K+F +GTI
Sbjct: 183 MLLAGKKVFVGKF---QPRAQRNRELGETAKKYTNVYVKNFGDHYNKESLEKLFAKYGTI 239
Query: 234 TSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGT--TNNDKVWYVGRAQKRAEREAD 291
TS VM SDGKS+ FGFV F P+ A AAV+ LN + +D +V RAQK++ER A+
Sbjct: 240 TSCDVM-TSDGKSKGFGFVAFAEPEEAEAAVQALNDSPVEGSDLKLHVCRAQKKSERHAE 298
Query: 292 LRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKG 351
L+ K EQ ++ R +K +G NLY+KNLD+S++DE LK+ F FG ITS KVM D++G SKG
Sbjct: 299 LKKKHEQHKVERMQKYQGVNLYVKNLDESVDDEALKKQFESFGNITSAKVMTDENGRSKG 358
Query: 352 SGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPL 411
GF F PEEAT A+ EMN KM+ KPLYVA+AQRKE+R+A+L +Q+ Q A M
Sbjct: 359 FGFVCFEKPEEATTAVTEMNSKMVCSKPLYVALAQRKEDRRAQLASQYMQRLASMRMH-- 416
Query: 412 ASGIPGYHHGAPRLGPQQLYYGQGTPGLMP-PQAAGYGFQQQVFPGLRPGGPNYIMPYHL 470
+ +PG G L PQQ G G P Q +G Q V PG R G N Y +
Sbjct: 417 -TNVPG---GG--LYPQQPQPGPGYYVANPMQQQRNFGGPQMVRPGGRWGPQNQ---YPV 467
Query: 471 QRQVHPGQRTGVRRSGNTHQMQQPQ 495
Q Q Q GV + ++M +PQ
Sbjct: 468 QNQYMMAQGPGVYQ----NRMGRPQ 488
>gi|313219101|emb|CBY43303.1| unnamed protein product [Oikopleura dioica]
Length = 512
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 251/552 (45%), Positives = 336/552 (60%), Gaps = 53/552 (9%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL ++ E+ LYD F V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I GKPIRIM+S RDPS+R+SG GNVFIKNLD SIDNKAL DTF++FG +LSCKV
Sbjct: 63 MNFDVIKGKPIRIMWSQRDPSLRRSGQGNVFIKNLDRSIDNKALYDTFSSFGNILSCKVV 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D NG SKG+GFV +E++E+AQ AI+ +NGML+ DK+V+V F R +R ++ + + F
Sbjct: 123 CDING-SKGFGFVHYESDESAQRAIEKVNGMLMEDKKVFVARFKSRNDRMREFGDAAKHF 181
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITS-AIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
TN++V NL ++ + L + F FG + S ++ ++ G S+C GF++F+ D A AAVE
Sbjct: 182 TNLFVKNLPDSWDTDALLENFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVE 241
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDDSIN 322
++ K Y GRAQK+AER ++L+AK+E QERI RY+ G NLY+KNLDDSI+
Sbjct: 242 IMHEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERIQRYQ---GVNLYVKNLDDSID 298
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE L+E F +FG ITS KV+ D +G SKG GF FS PEEAT+A+ EMNG++ G KPLYV
Sbjct: 299 DEGLREAFKQFGNITSAKVITDLNGRSKGFGFVCFSSPEEATKAVTEMNGRIFGGKPLYV 358
Query: 383 AVAQRKEERKARLQAQFAQIRAPGGM---SPLASGIPGYHHGAPRLGPQQLYYGQGTPGL 439
+AQRKE+RKA LQ Q+ Q R G+ + + + + + PR L QG P
Sbjct: 359 GLAQRKEDRKAHLQQQYMQ-RVSTGIRMQAFMGNQVVNQNFQPPRY---ILPTMQGQPVQ 414
Query: 440 MPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRN 499
M PQ P +R P + P QR PG +R G Q PQF
Sbjct: 415 MFPQGT---------PMVR-ATPRWAPPN--QRVQMPGM---IR--GRMAQQGGPQF--- 454
Query: 500 SNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPV--PVPISTLTSALASAS 557
R + RN V +P EV MP +P P + +S LA+A+
Sbjct: 455 -----RLTPSVRN---------VQIPSEVIQMPPQMPHQNQPAGDQAPETLTSSMLANAN 500
Query: 558 PDDRTRMLGEQL 569
P ++ +MLGE+L
Sbjct: 501 PQEQKQMLGERL 512
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LYV +L+ ++++ L + F Q + S +V D + RS G+ +V +S+P++A
Sbjct: 283 YQGVNLYVKNLDDSIDDEGLREAFKQFGNITSAKVITDLNGRSK-GFGFVCFSSPEEATK 341
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKAL 132
A +N GKP+ + + R RK+ +++ + T I +A
Sbjct: 342 AVTEMNGRIFGGKPLYVGLAQRKED-RKAHLQQQYMQRVSTGIRMQAF 388
>gi|237833723|ref|XP_002366159.1| polyadenylate-binding protein, putative [Toxoplasma gondii ME49]
gi|211963823|gb|EEA99018.1| polyadenylate-binding protein, putative [Toxoplasma gondii ME49]
Length = 768
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/472 (48%), Positives = 294/472 (62%), Gaps = 46/472 (9%)
Query: 5 GAAAATAAVTSATTAAV---PSGYGNV--------SLYVGDLEQNVNESQLYDLFSQVAQ 53
G A + V+ TTA P+G N SLYVGDL Q+V E+ L+++F+ V
Sbjct: 49 GNANVSGGVSGTTTAPAGQRPNGGMNAGAANFVSPSLYVGDLHQDVTEAMLFEVFNSVGP 108
Query: 54 VVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKS 113
V S+RVCRD R SLGYAYVNY QDA + + LN+ I G+P RIM+ HRDPS+RKS
Sbjct: 109 VTSIRVCRDTVTRRSLGYAYVNYQGIQDAERSLDTLNYTVIKGQPCRIMWCHRDPSLRKS 168
Query: 114 GYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAI 173
G GN+F+KNLD +IDNKAL DTF+ FG +LSCKVA+D NG SKGYGFV +ENEE+A++AI
Sbjct: 169 GNGNIFVKNLDKNIDNKALYDTFSLFGNILSCKVAVDDNGHSKGYGFVHYENEESARSAI 228
Query: 174 KMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDED-LKKIFGHFGT 232
+NGMLI K VYVG F+RR ER K+TNVY+ N+ DE L++ F FG+
Sbjct: 229 DKVNGMLIGGKTVYVGPFIRRAER-DNLAEAKYTNVYIKNMPSAWEDESRLRETFSKFGS 287
Query: 233 ITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNG----------------------- 269
ITS +V KD G R F F NF D+A AAVE LNG
Sbjct: 288 ITSLVVRKDPKG--RLFAFCNFADHDSAKAAVEALNGKRVTDAGAIKEGEDSGAEEKEEE 345
Query: 270 --TTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
D++ +VG Q +A R A LRAKFEQ R ++ +G NLY+KN+DDSI+DEKL+
Sbjct: 346 GQKREGDQILFVGPHQSKAHRSAMLRAKFEQMNQDRNDRFQGVNLYIKNMDDSIDDEKLR 405
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
+LF FG+ITS KVM D+ G S+ GF F PEEAT+A+ EM+ K++ KPLYV +A+R
Sbjct: 406 QLFEPFGSITSAKVMRDERGVSRCFGFVCFMSPEEATKAVTEMHLKLVKGKPLYVGLAER 465
Query: 388 KEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGL 439
+E+R RLQ +F R P + P A+ +PG + A QL YG G P L
Sbjct: 466 REQRLMRLQQRF---RLP-SLRPAAAALPG--NVAAAAAAAQLQYGGGAPQL 511
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 558 PDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVL 617
P + +MLGE+L+PL+ +P A K+TGM+LEMD E+L L+ES LK KV EA+ VL
Sbjct: 705 PSMQKQMLGEKLFPLIARYQPELAGKITGMMLEMDNAELLILLESEAQLKAKVDEALRVL 764
Query: 618 QEAA 621
Q+A+
Sbjct: 765 QQAS 768
>gi|116202083|ref|XP_001226853.1| hypothetical protein CHGG_08926 [Chaetomium globosum CBS 148.51]
gi|121932498|sp|Q2GSX8.1|PABP_CHAGB RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|88177444|gb|EAQ84912.1| hypothetical protein CHGG_08926 [Chaetomium globosum CBS 148.51]
Length = 783
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/506 (45%), Positives = 308/506 (60%), Gaps = 59/506 (11%)
Query: 18 TAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYS 77
++A P + SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD R SLGYAYVNY+
Sbjct: 55 SSAAPHPQSSASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDTITRRSLGYAYVNYN 114
Query: 78 NPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFA 137
+ D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLD +IDNKAL DTFA
Sbjct: 115 STSDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFA 174
Query: 138 AFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
AFG +LSCKVA D NG SKGYGFV +E +EAA AIK +N ML+N+K+VYVG + +++R
Sbjct: 175 AFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNNMLLNEKKVYVGYHIPKKDR 234
Query: 198 AQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQ 255
+ + FTN+YV N++ TDE+ + +F +G +TS+ + +DS+GKSR FGFVNF
Sbjct: 235 QSKFEEMKANFTNIYVKNISLEATDEEFRDLFAKYGDVTSSSLARDSEGKSRGFGFVNFT 294
Query: 256 SPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLK 315
+ + AA AVE+LNG + YVGRAQK+ ERE +LR +E R+ + K +G NLY+K
Sbjct: 295 THECAAKAVEELNGKEFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIK 354
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVD------------------------------- 344
NL D I+D+KL+++FSE+G ITS KVM D
Sbjct: 355 NLADDIDDDKLRQMFSEYGPITSAKVMRDAVTEGSAEEETEGKDKENKKEGEQAAEAEGE 414
Query: 345 --------------QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEE 390
+ G SKG GF FS P++AT+A+ EMN +MI KPLYVA+AQRK+
Sbjct: 415 AEGAEKKTEKKGDRRLGKSKGFGFVCFSNPDDATKAVAEMNQRMIEGKPLYVALAQRKDV 474
Query: 391 RKARLQAQFAQIRAPGGMSPLA--SGIPGYHHGAPRLGPQQLYYGQG-TPGLMPPQAAGY 447
RK +L+A Q R M A +G+P + P +YY G P MPP G
Sbjct: 475 RKNQLEASI-QARNQLRMQQAAAQAGLPQQYMQTP------VYYAPGQQPNFMPPGGRGM 527
Query: 448 GFQQQVF--PGLRPGGPNYIMPYHLQ 471
F Q P ++ G P PY Q
Sbjct: 528 PFPQGGLGMPAVQGGRPGQFPPYAQQ 553
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 547 STLTSAL-ASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEA 605
S L S L A+ +P + ++LGE L+P ++ ++P A K+TGMLLEMD E+++L+E A
Sbjct: 677 SLLQSQLTATNNPQQQKQILGENLFPKIQALQPDLAGKITGMLLEMDNAELVNLLEDEAA 736
Query: 606 LKTKVAEAMAVLQE 619
L KV EAMAV E
Sbjct: 737 LVAKVNEAMAVYDE 750
>gi|254567738|ref|XP_002490979.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|238030776|emb|CAY68699.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|328352488|emb|CCA38887.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Komagataella pastoris CBS 7435]
Length = 626
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 251/624 (40%), Positives = 358/624 (57%), Gaps = 46/624 (7%)
Query: 7 AAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKR 66
A +T A + ++ + SLYVG+L+ V ES LY+ FS + V S+RVCRD +
Sbjct: 31 ATSTEAAEESNESSTQASETLASLYVGELDPTVTESDLYEFFSPIGSVNSIRVCRDAVTK 90
Query: 67 SSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTS 126
SLGY YVN+ + A E LN+ I G R+M+S RDPS+R+SG GN+FIKNLD +
Sbjct: 91 RSLGYGYVNFHSQAAGERALEELNYAEIKGVRCRLMWSQRDPSLRRSGSGNIFIKNLDPA 150
Query: 127 IDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQV 186
I+NK L DTF++FG VLSCKVA D NG SKG+GFV +E++EAAQ AI+ +NGML+N +++
Sbjct: 151 IENKTLHDTFSSFGKVLSCKVATDENGNSKGFGFVHYESDEAAQAAIENINGMLLNGREI 210
Query: 187 YVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG 244
YVG + +++R Q + +TNV+V N T+++L+++F +G ITS + DS+G
Sbjct: 211 YVGPHLAKKDRESRFQEMIKNYTNVFVKNFDTESTEDELRELFESYGPITSIHLQVDSEG 270
Query: 245 KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRY 304
++ FGFVNF D A AVE LN K YVGRAQK+ ER +L K+E +R+ +
Sbjct: 271 HNKGFGFVNFAEHDDAVKAVEALNDKEYKGKPLYVGRAQKKNERVHELTKKYEADRLEKL 330
Query: 305 EKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEAT 364
+K + NL++KNLD+SI+D +L+E F FGTITS KVM+D++G S+G GF S PEEAT
Sbjct: 331 QKYQSVNLFIKNLDESIDDARLEEEFKPFGTITSAKVMLDENGKSRGFGFVCLSTPEEAT 390
Query: 365 RALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPR 424
+A++EMN +M+ KPLYVA+AQ K R+++L AQ QI+A M PG P
Sbjct: 391 KAISEMNQRMVANKPLYVALAQPKAIRRSQL-AQ--QIQARNQMRMQQQAGPG----IPN 443
Query: 425 LGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRR 484
Q ++YGQ PG++PP A + P G N I Q G+ R
Sbjct: 444 QFVQPIFYGQ-QPGMLPPGAR-----------VPPMG-NQI-----------PQFAGMPR 479
Query: 485 SGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPV 544
G Q Q P+ N Y NG P + P R
Sbjct: 480 PGPFPQGQFPRMAPNGQPMPVYGQPVFNGNG---------PQQRGYYPNNRQNKNRNQKE 530
Query: 545 PISTLTSALASASPDDRTRMLGEQLYPLV----ENIEPVHASKVTGMLLEMDQTEVLHLI 600
++L + L + + R+LGE+LYP V + +P A K+TGM+L++D E+L L+
Sbjct: 531 EGNSLAAILPQLPLEQQKRVLGEELYPKVVATNKTQDPEAAGKITGMILDLDNQEILQLL 590
Query: 601 ESPEALKTKVAEAMAVLQEAAARS 624
E E T EA+ +E +++
Sbjct: 591 EDEELFNTHFNEALQAYEEYKSKT 614
>gi|68468953|ref|XP_721535.1| hypothetical protein CaO19.3037 [Candida albicans SC5314]
gi|68469502|ref|XP_721264.1| hypothetical protein CaO19.10555 [Candida albicans SC5314]
gi|74680286|sp|Q5AI15.1|PABP_CANAL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|46443173|gb|EAL02457.1| hypothetical protein CaO19.10555 [Candida albicans SC5314]
gi|46443455|gb|EAL02737.1| hypothetical protein CaO19.3037 [Candida albicans SC5314]
gi|238879187|gb|EEQ42825.1| polyadenylate-binding protein [Candida albicans WO-1]
Length = 629
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 254/602 (42%), Positives = 354/602 (58%), Gaps = 46/602 (7%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L +VNE+ L+++FS + QV S+RVCRD + SLGYAYVNY +D A
Sbjct: 51 SASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKYEDGEKAI 110
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ PI G+P RIM+S RDPS R+SG GN+FIKNL +IDNKAL DTF+AFG +LSCK
Sbjct: 111 EELNYNPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSCK 170
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA D GQSK +GFV +E EAA+ AI+ +NGML+ND++V+VG + +++R + +
Sbjct: 171 VATDEFGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEMKA 230
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTN+YV N+ ++E +K+F FG ITS + KD DGKS+ FGFVNF+ ++A AV
Sbjct: 231 NFTNIYVKNIDLNYSEESFEKLFSPFGKITSIYLEKDQDGKSKGFGFVNFEDHESAVKAV 290
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
E+LN N + YVGRAQK+ ER +L+ ++E R+ + K +G NL++KNLDD+I+ E
Sbjct: 291 EELNDKEINGQKIYVGRAQKKRERLEELKKQYEAVRLEKLAKYQGVNLFVKNLDDTIDSE 350
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KL+E F FGTITS KVMVD+ G SKG GF F+ PEEAT+A+ EMN +MI KPLYVA+
Sbjct: 351 KLEEEFKPFGTITSAKVMVDEAGKSKGFGFVCFTTPEEATKAITEMNTRMINGKPLYVAL 410
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQA 444
AQRK+ R+++L+ Q + A G+PG + P ++YGQ G PP
Sbjct: 411 AQRKDVRRSQLEQQIQARNQMRMQNAAAGGLPGQF-----IPP--MFYGQ--QGFFPPNG 461
Query: 445 AGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQ--RTGVRRSGNTHQMQQPQFMRNSN- 501
G +P GPN M + Q P Q R G PQF ++ N
Sbjct: 462 RG----NAPYP-----GPNPQMMMRGRGQPFPEQWPRPGPNGQPVPVYGIPPQFQQDFNG 512
Query: 502 QGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDR 561
Q +R P + P L + ++S D +
Sbjct: 513 QNMR-------------------PQQQQQQQPRGGYYPNRNQTSKRDLAAIISSVPQDQQ 553
Query: 562 TRMLGEQLYPLV----ENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVL 617
R+LGE+LYP + + EP A K+TGM+L ++ E+L L++ E +A+
Sbjct: 554 KRILGEELYPKIVATGKAQEPEAAGKITGMMLGLENQEILDLLDDDELFNNHFEDALTAF 613
Query: 618 QE 619
+E
Sbjct: 614 EE 615
>gi|693937|emb|CAA88401.1| polyadenylate binding protein II [Homo sapiens]
Length = 522
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/360 (56%), Positives = 262/360 (72%), Gaps = 4/360 (1%)
Query: 44 LYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMY 103
LY+ FS ++S+RVCRD R SLGYAYVN+ P DA A + +NF I GKP+RIM+
Sbjct: 2 LYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMW 61
Query: 104 SHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQF 163
S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LSCKV D NG SKGYGFV F
Sbjct: 62 SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHF 120
Query: 164 ENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDE 221
E +EAA+ AI+ +NGML+ND++V+VG F R+ER + + +FTNVY+ N E + DE
Sbjct: 121 ETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDE 180
Query: 222 DLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGR 281
LK +FG FG S VM D GKS+ FGFV+F+ + A AV+++NG N K YVGR
Sbjct: 181 RLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGR 240
Query: 282 AQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKV 341
AQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+DE+L++ FS FGTITS KV
Sbjct: 241 AQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV 300
Query: 342 MVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ 401
M++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYVA+AQRKEER+A L Q+ Q
Sbjct: 301 MME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQ 359
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 166/299 (55%), Gaps = 25/299 (8%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ ++ +L+++++ LYD FS ++S +V D++ S GY +V++ + A
Sbjct: 71 SGVGNI--FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAA 126
Query: 83 ANAKEALNFMPINGKPIRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDTF 136
A E +N M +N + + + R+ + R + NV+IKN +D++ L D F
Sbjct: 127 ERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLF 186
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG LS KV D +G+SKG+GFV FE E AQ A+ +NG +N KQ+YVG ++ E
Sbjct: 187 GKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 246
Query: 197 RAQQNVSPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
R Q + KF N+YV NL + + DE L+K F FGTITSA VM +
Sbjct: 247 R-QTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG- 304
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
G+S+ FGFV F SP+ A AV ++NG K YV AQ++ ER+A L ++ Q S
Sbjct: 305 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMAS 363
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 159/273 (58%), Gaps = 16/273 (5%)
Query: 132 LCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L + F+ G +LS +V D +S GY +V F+ A+ A+ +N +I K V +
Sbjct: 2 LYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMW 61
Query: 191 FVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFG 250
R + V N+++ NL +++ ++ L F FG I S V+ D +G S+ +G
Sbjct: 62 SQRDPSLRKSGVG----NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYG 116
Query: 251 FVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGA 310
FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L A+ ++
Sbjct: 117 FVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKE----------FT 166
Query: 311 NLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEM 370
N+Y+KN + ++DE+LK+LF +FG S KVM D+ G SKG GF +F E+A +A++EM
Sbjct: 167 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 226
Query: 371 NGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
NGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 227 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 259
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 70/104 (67%), Gaps = 10/104 (9%)
Query: 532 PATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEM 591
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGMLLE+
Sbjct: 421 PAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEI 474
Query: 592 DQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 475 DNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 518
>gi|45201218|ref|NP_986788.1| AGR122Cp [Ashbya gossypii ATCC 10895]
gi|74691820|sp|Q74ZS6.1|PABP_ASHGO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|44986072|gb|AAS54612.1| AGR122Cp [Ashbya gossypii ATCC 10895]
gi|374110037|gb|AEY98942.1| FAGR122Cp [Ashbya gossypii FDAG1]
Length = 585
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/437 (50%), Positives = 296/437 (67%), Gaps = 19/437 (4%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVG+LE V+E+ LYD+FS + V S+RVCRD +SLGYAYVN+ + + A E
Sbjct: 39 SLYVGELEPTVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGPKAIEQ 98
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LN+ I GKP RIM+S RDPS+RK G GN++IKNL +IDNK+L +TF+ FG +LSCKVA
Sbjct: 99 LNYTLIKGKPCRIMWSQRDPSLRKKGSGNIYIKNLHPAIDNKSLHETFSTFGNILSCKVA 158
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSPKF 206
D NG S+G+GFV FENE A++AI+ ++GML+ND++VYV L V +++R + V KF
Sbjct: 159 TDENGVSRGFGFVHFENESDARDAIEAVDGMLMNDQEVYVALHVSKKDRQSKLEEVKAKF 218
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV N+ + + E+ +++FG +G ITSA++ KDS+GK R FGFVNF+ AAA AV++
Sbjct: 219 TNVYVKNIDQETSQEEFEELFGKYGKITSAVLEKDSEGKLRGFGFVNFEDHAAAAKAVDE 278
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
LN + YVGRAQK+ ER +L+ ++E R+ + K +G NL++KNLDDSI+DEKL
Sbjct: 279 LNELEFKGQKLYVGRAQKKYERLQELKKQYEAARLEKLAKYQGVNLFVKNLDDSIDDEKL 338
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
KE F+ FGTITS KVM D+ G S+G GF FS PEEAT+A+ E N +++ KPLYVA+AQ
Sbjct: 339 KEEFAPFGTITSAKVMRDETGNSRGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 398
Query: 387 RKEERKARLQAQFA---QIR---APGGMSPLASGIPG-------YHHGA-PRL---GPQQ 429
RKE R+ +L Q Q+R A + +G+PG Y+ G PR+ GP
Sbjct: 399 RKEVRRNQLAQQIQARNQMRFQHANAAAAAAVAGLPGQFMPPPMYYGGIPPRVPFQGPNP 458
Query: 430 LYYGQGTPGLMPPQAAG 446
G G MPPQ G
Sbjct: 459 QMAGMPKNGAMPPQQFG 475
>gi|189190886|ref|XP_001931782.1| polyadenylate-binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973388|gb|EDU40887.1| polyadenylate-binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 704
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/513 (45%), Positives = 305/513 (59%), Gaps = 71/513 (13%)
Query: 4 TGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQ 63
T AA V++ T+AA + SLYVG+L+ +V E+ L++LFS + QV S+RVCRD
Sbjct: 24 TNVPAAQGEVSTPTSAAPAHNQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDA 83
Query: 64 SKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
R SLGYAYVNY++ +D A E LN+ I GKP RIM+S RDP++RK+G GNVFIKNL
Sbjct: 84 VTRRSLGYAYVNYNSSEDGEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNL 143
Query: 124 DTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND 183
D +IDNKAL DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+N+
Sbjct: 144 DHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNE 203
Query: 184 KQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD 241
K+V+VG + ++ER + + FTN+YV N+ V+DED + +F G ITSA + +D
Sbjct: 204 KKVFVGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVSDEDFRDLFEKHGDITSASIARD 263
Query: 242 SDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERI 301
GKSR FGFVN+ +AA+AAV+ LN T + YVGRAQK+ ERE +LR ++E R+
Sbjct: 264 DQGKSRGFGFVNYIKHEAASAAVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAARL 323
Query: 302 SRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH--------------- 346
+ K +G NLY+KNL+D ++DEKL+++F+ FGTITS KVM D
Sbjct: 324 EKQSKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVMRDAMPAAGSEDATDEKKDE 383
Query: 347 ------------------------------------GFSKGSGFAAFSMPEEATRALNEM 370
G SKG GF FS P+EAT+A+ EM
Sbjct: 384 SKEESEEAKDESKEDSDDKKDEKADKVTIKGEKKILGKSKGFGFVCFSNPDEATKAVTEM 443
Query: 371 NGKMIGRKPLYVAVAQRKEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGAPRLGP 427
N KMI KPLYVA+AQRK+ RK +L+A Q+R GIP
Sbjct: 444 NQKMIENKPLYVALAQRKDVRKNQLEATIQARNQLRMQQQQQQQFGGIP----------- 492
Query: 428 QQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPG 460
Q++ G +M P A G G Q FP PG
Sbjct: 493 -QMFIAPGQQPMMFP-AGGRG--QMPFPAGIPG 521
>gi|353227476|emb|CCA77984.1| related to mRNA polyadenylate-binding protein PAB1 [Piriformospora
indica DSM 11827]
Length = 693
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/428 (50%), Positives = 292/428 (68%), Gaps = 16/428 (3%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ +V E+ L+++F+ + V S+RVCRD R SLGYAYVNY N D A
Sbjct: 109 SASLYVGELDPSVTEAILFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNSSDGERAL 168
Query: 87 EALNFMPINGKPI---RIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
E LN+ I GKP RIM+S RDP++RK+G GN+FIKNLD IDNKAL DTF AFG VL
Sbjct: 169 EQLNYSLIKGKPWHVSRIMWSQRDPALRKTGQGNIFIKNLDEGIDNKALHDTFVAFGNVL 228
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--N 201
SCKVA+D G SKGYGFV +E EAA AIK ++GML+NDK+VYVG + R+ER +
Sbjct: 229 SCKVAVDEQGNSKGYGFVHYETAEAADAAIKAVDGMLLNDKKVYVGRHIPRKERQSKLDE 288
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
+ +FTN+YV NL + +++ +K+F +GTITSA++ D+DGKS+ FGFVN+++ + A
Sbjct: 289 IRAQFTNIYVKNLDTEIDEDEFRKLFEPYGTITSAVLNLDADGKSKGFGFVNYETHEMAQ 348
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV+ LN N K +VGRAQKR ER+ +LR F+ ++ R KL+G NLY+KN+DD +
Sbjct: 349 KAVDALNEKDINGKKLFVGRAQKRNERDEELRRTFDAAKMERLAKLQGVNLYIKNIDDDM 408
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DEKL+ F +GTITS K+M D G SKG GF FS P+EATRA+ EMN KMIG KPLY
Sbjct: 409 DDEKLRAEFEPYGTITSSKIMRDDKGVSKGFGFVCFSTPDEATRAIAEMNNKMIGSKPLY 468
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMP 441
V++AQR++ R+ +L++Q +Q A+G+ GY +G +YY G PG
Sbjct: 469 VSLAQRRDVRRQQLESQISQRNQIRMQQAAAAGLTGYINGP-------MYY--GAPGF-- 517
Query: 442 PQAAGYGF 449
P G G+
Sbjct: 518 PAQGGRGY 525
>gi|380494250|emb|CCF33289.1| Poly(A) RNA binding protein [Colletotrichum higginsianum]
Length = 677
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/517 (44%), Positives = 312/517 (60%), Gaps = 66/517 (12%)
Query: 3 ATGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRD 62
A G A TA T ++ A P + SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD
Sbjct: 41 AQGDNADTAGPTPSSAAPHPQA--SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRD 98
Query: 63 QSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKN 122
R SLGYAYVNY+ D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKN
Sbjct: 99 AVTRRSLGYAYVNYNTTSDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKN 158
Query: 123 LDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIN 182
LD +IDNKAL DTFAAFG +LSCKVA D NG SKGYGFV +E +EAA AIK +NGML+N
Sbjct: 159 LDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLN 218
Query: 183 DKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMK 240
+K+VYVG + +++R + + FTN+Y+ N++ VTD++ + +F FG +TS+ + +
Sbjct: 219 EKKVYVGHHIPKKDRQSKFEEMKANFTNIYIKNISGEVTDDEFRDLFTPFGDVTSSSLAR 278
Query: 241 DSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQER 300
D +GKSR FGFVNF + +AAA AV+ LNG + YVGRAQK+ ERE +LR +E R
Sbjct: 279 DQEGKSRGFGFVNFTTHEAAAKAVDDLNGKDFRGQDLYVGRAQKKHEREEELRKSYEAAR 338
Query: 301 ISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ--------------- 345
+ + K +G NLY+KNLDD ++DEKL++LF++FG ITS KVM D
Sbjct: 339 MEKANKYQGVNLYIKNLDDDVDDEKLRQLFADFGPITSAKVMRDNATDSGNEDEGSSEEK 398
Query: 346 -------------------------------------HGFSKGSGFAAFSMPEEATRALN 368
HG SKG GF FS P++AT+A+
Sbjct: 399 ETEAKKDEEEEEKPEEAKTDDKEDADKKSDKKSDKKLHGKSKGFGFVCFSNPDDATKAVA 458
Query: 369 EMNGKMIGRKPLYVAVAQRKEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGAPRL 425
EMN +M+ KPLYVA+AQRK+ RK++L+A Q+R + A+G+P + P
Sbjct: 459 EMNQRMVNGKPLYVALAQRKDVRKSQLEASIQARNQLRM--QQAAAAAGMPQQYMQPPVF 516
Query: 426 --GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPG 460
QQ + QG G+ PQ G G RPG
Sbjct: 517 YAAGQQPVFPQGGRGMAFPQP---GMAMPAVQGGRPG 550
>gi|167519406|ref|XP_001744043.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778005|gb|EDQ91621.1| predicted protein [Monosiga brevicollis MX1]
Length = 563
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 255/597 (42%), Positives = 346/597 (57%), Gaps = 54/597 (9%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
N SLYVGDL V E+ LY+ FSQ+ V+S+RVCRD R SLGYAYVNY DA +A
Sbjct: 7 NASLYVGDLHPEVTEATLYEFFSQMGSVISIRVCRDAVSRQSLGYAYVNYQQHADAKHAL 66
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LNF I+ KP RIM++ R+P+ R+SG GN+FIKNL+ IDNKAL DTF+AFGT+LSCK
Sbjct: 67 EELNFEKIHDKPCRIMWAQRNPAARRSGAGNIFIKNLNKEIDNKALYDTFSAFGTILSCK 126
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF 206
VA D G+S+GYGFV FE EE AQ AI +NG ++ + V V F+ R+ER QQ +
Sbjct: 127 VAADEKGESRGYGFVHFEKEEDAQKAIDTVNGKMLLKQVVTVTKFLSRKEREQQG-GRTY 185
Query: 207 TNVYVNNLAET-VTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
TN+YV NL ++ T++DLKK+F FGTITS + KD + KSR FGFVNF++ +AA AAVE
Sbjct: 186 TNIYVKNLPDSYATNDDLKKLFEKFGTITSTFLAKDENDKSRGFGFVNFENSEAANAAVE 245
Query: 266 KLN-GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
+N D+ +VGRA K+ ERE +L+ ++ R R EK K +NLY+K+L + + ++
Sbjct: 246 AMNEKEIETDRKLFVGRAMKKHERERELKRIHDKIRQERDEKNKNSNLYIKHLPEDVTED 305
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
L++ FS+FGTITS K+M D +G S+G GF F +EA A+ EM+G MI KPLYVA+
Sbjct: 306 ALRDKFSKFGTITSLKIMTDNNGDSRGFGFVNFDSADEAAAAIQEMHGSMIDGKPLYVAL 365
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQA 444
A RK +R Q Q A R G P+ GY P +MPP
Sbjct: 366 ALRKVDR----QKQLASRRTMPGQMPM-----GY-----------------LPFMMPPPQ 399
Query: 445 AGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGI 504
A FP P ++M Q+Q Q+ +GN MR +G
Sbjct: 400 ANMMRMGNRFP------PMFMMQQQQQQQQQQQQQHAPGMNGN---------MRGRGRGN 444
Query: 505 RYLDNARNGTDQSVVSMVPVPFEVSGMP--ATPVETPRPVPVPISTLT--SALASASPDD 560
N R G Q P+P + MP + P P P + + LA + +
Sbjct: 445 PNKGNGR-GRGQG-----PMPSQGQPMPMQSAPSAARVAAPAPNNNQDEFANLAHMTDAE 498
Query: 561 RTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVL 617
+ +LGE+L+PL++ A K+TGMLL M+ EVL+L++ + LK + EA +L
Sbjct: 499 QKNLLGEKLFPLIQQEYHERAGKITGMLLGMETAEVLNLLQDQDQLKQRAREAYDLL 555
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 305 EKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGF-SKGSGFAAFSMPEEA 363
E + A+LY+ +L + + L E FS+ G++ S +V D S G + + +A
Sbjct: 3 EHQQNASLYVGDLHPEVTEATLYEFFSQMGSVISIRVCRDAVSRQSLGYAYVNYQQHADA 62
Query: 364 TRALNEMNGKMIGRKPLYVAVAQR 387
AL E+N + I KP + AQR
Sbjct: 63 KHALEELNFEKIHDKPCRIMWAQR 86
>gi|356505295|ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 632
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 265/625 (42%), Positives = 365/625 (58%), Gaps = 35/625 (5%)
Query: 17 TTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNY 76
+ AA P+ SLYVGDL NV+++ L D FS + SVRVC+D S SL Y YVN+
Sbjct: 6 SVAAAPA-----SLYVGDLHPNVSDNHLVDAFSDFESLASVRVCKDSSTGKSLCYGYVNF 60
Query: 77 SNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTF 136
+PQDA A E N +NGK +R+M+S RDP RK+ GN+F+KNL SIDN L D F
Sbjct: 61 VSPQDAIRAIELKNNSTLNGKAMRVMWSRRDPDARKNAIGNLFVKNLPESIDNAGLQDMF 120
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
+G +LS KV + +G+SKGYGFVQFE+EE++ AI+ LNG + DKQ+YVG FV++ +
Sbjct: 121 KKYGNILSSKVVMSEDGKSKGYGFVQFESEESSNVAIEKLNGSTVGDKQLYVGKFVKKSD 180
Query: 197 RAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQS 256
R ++TN+Y+ NL V++ L++ F FG I S ++ KD+ G S+ FGFVN+ +
Sbjct: 181 RILPGPDARYTNLYMKNLDLDVSEATLQEKFSSFGKIVSLVIAKDNIGMSKGFGFVNYDN 240
Query: 257 PDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
PD A A+E +NG+ K+ YV RAQK+AERE L +FE++R + K KG+N+Y+KN
Sbjct: 241 PDDAKRAMEAMNGSKLGSKILYVARAQKKAEREQILHHQFEEKRKEQILKYKGSNIYVKN 300
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
+DD ++DE+L++ FS G ITS K+M D G SKG GF FS PEEA +A+N +G M
Sbjct: 301 IDDHVSDEELRDHFSACGIITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNTFHGFMFH 360
Query: 377 RKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGT 436
KPLYVA+AQRKE+RKA+LQ Q+AQ A G P + IPG + P Y G
Sbjct: 361 GKPLYVALAQRKEDRKAQLQLQYAQQVA-GLSGPSTAIIPGGY-------PPYYYAATGV 412
Query: 437 PGLMPPQAAGYGFQQQVFPGLRPG-GPN-YIMPYH-LQRQVHPGQRTGVRR--------- 484
+PP+A G Q P +RPG G N + +P Q+ P R+
Sbjct: 413 ISHVPPRA---GLMYQHLP-MRPGWGANGFALPARSFQQSPVPAVSNNTRQHRQNRGRLN 468
Query: 485 -----SGNTHQMQQ-PQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVET 538
GNTH + PQ + S I R G + + S E ++
Sbjct: 469 GNPIAQGNTHSVTYLPQAQQISQPVISSSTQQRTGQAKYLPSGRQRDMEKGSGSSSSGSN 528
Query: 539 PRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLH 598
L S LA A+P+ + +LGE LY LV ++P A+K+TGMLLEMD E+L
Sbjct: 529 SGRGSQGSEMLHSMLAGAAPEQQKEILGEHLYMLVHKLKPTLAAKITGMLLEMDNGELLL 588
Query: 599 LIESPEALKTKVAEAMAVLQEAAAR 623
L+ESPE+L KV EA+ VL+ + +
Sbjct: 589 LLESPESLSAKVEEAVQVLKNSKTK 613
>gi|431894424|gb|ELK04224.1| Polyadenylate-binding protein 1-like protein [Pteropus alecto]
Length = 512
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/393 (54%), Positives = 277/393 (70%), Gaps = 17/393 (4%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA A +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +LSCKV
Sbjct: 72 MNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVV 131
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F RQER + + +F
Sbjct: 132 CDDHG-SRGFGFVHFETHEAAQLAISTMNGMLLNDRKVFVGHFKSRQEREAELGARAMEF 190
Query: 207 TNVYVNNLAETVTDEDLKKIFGHF-----GTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
TN+YV NL + + L+++F F G + S VM+D G SR FGFVNF+ + A
Sbjct: 191 TNIYVKNLQVDMDEWGLQELFSQFDWSSPGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQ 250
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLD 318
AV +NG ++ YVGRAQKR ER+ +L+ KFE Q+R++RY ++G NLY+KNLD
Sbjct: 251 KAVMDMNGKEVRGRLLYVGRAQKRMERQNELKRKFEQMKQDRLNRYH-VRGVNLYVKNLD 309
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
DSINDEKL++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG+++G K
Sbjct: 310 DSINDEKLRKEFSPYGMITSAKVMT-EGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTK 368
Query: 379 PLYVAVAQRKEERKARLQAQFAQ----IRAPGG 407
PLYVA+AQRKEERKA L Q+ Q +RA GG
Sbjct: 369 PLYVALAQRKEERKAILTNQYMQRLSTVRALGG 401
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 531 MPATPVETPRPVPVP-ISTLTSALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGML 588
+PA P V +P LT+++ +A+P ++ +M+GE+LYPL+ ++ A K+TGML
Sbjct: 415 LPAVPQVQEPAVCIPGKEPLTASMLAAAPLHEQKQMIGERLYPLIYDVHTQLAGKITGML 474
Query: 589 LEMDQTEVLHLIESPEALKTKVA 611
LE+D +E+L ++ESPE+L KV
Sbjct: 475 LEIDNSELLLMLESPESLNAKVG 497
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
V+LYV +L+ ++N+ +L FS + S +V + S G+ +V +S+P++A A
Sbjct: 301 VNLYVKNLDDSINDEKLRKEFSPYGMITSAKVMTEGG--HSKGFGFVCFSSPEEATKAVT 358
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDT 125
+N + KP+ + + R RK+ N +++ L T
Sbjct: 359 EMNGRIVGTKPLYVALAQRKEE-RKAILTNQYMQRLST 395
>gi|341884731|gb|EGT40666.1| CBN-PAB-2 protein [Caenorhabditis brenneri]
Length = 707
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/478 (47%), Positives = 306/478 (64%), Gaps = 42/478 (8%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLY+GDL +V ES L++ FS V+S+RVCRD + R SLGYAYVN+ P DA
Sbjct: 59 YSMASLYIGDLHGDVTESMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAER 118
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I+G+P+RIM+S RDP+ R++G GN+FIKNLD IDNK++ DTF+ FG +LS
Sbjct: 119 ALDTMNFEIIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSIYDTFSLFGNILS 178
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKVA D +G SKGYGFV FE E +AQ AI+ +NGML++DK+V+VG F R +R ++
Sbjct: 179 CKVATDDDGNSKGYGFVHFETEASAQTAIEKVNGMLLSDKKVFVGKFQPRAQRMKELGES 238
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
K+TNV+V N E + + LK++F +G I SA+VM D++GK + FGFV + P+AA+
Sbjct: 239 GLKYTNVFVKNFGEHLDEAKLKEMFSKYGEINSAVVMTDAEGKPKGFGFVAYADPEAASK 298
Query: 263 AVEKLNGTT--NNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNL 317
AV+ LN + + V RAQK++ER A+L+ K+E QER+ RY+ G NLY+KN+
Sbjct: 299 AVDDLNESILEGTELKLSVCRAQKKSERSAELKRKYEALKQERVQRYQ---GVNLYVKNI 355
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
++ + DE L+ F++FGTITS KVMVD++G SKG GF F PEEAT A+ EMN KMIG
Sbjct: 356 EEELTDEGLRAHFAQFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTEMNSKMIGA 415
Query: 378 KPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLAS-GIPG----YHHGAPRLGPQQLYY 432
KPLYVA+AQRKE+R+A+L +Q+ Q A M A+ G+PG Y G QQ YY
Sbjct: 416 KPLYVALAQRKEDRRAQLASQYMQRLATLRMGQQAAGGVPGMTQIYQPG------QQGYY 469
Query: 433 ------GQGTPGLMPPQAAGYG------FQQQVFPGLRPGGPNYIMPYHLQRQVHPGQ 478
G P P A G F QVF P++ QRQ P Q
Sbjct: 470 VPNPMAAPGRPAFQPQAAPMRGPPGQRMFNNQVF---------MQYPFNQQRQGFPQQ 518
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Query: 548 TLTS-ALASASPDDRTRMLGEQLYPLVENIEPVH--ASKVTGMLLEMDQTEVLHLIESPE 604
TLTS LA A+P ++ ++LGE++Y L+E + P H A K+TGM+LE+D E++ +++ +
Sbjct: 620 TLTSHMLAQAAPQEQKQLLGERIYALIEKMFPNHKDAGKITGMMLEIDNAELIMMLQDAD 679
Query: 605 ALKTKVAEAMAVLQEA 620
++KV EA VL +A
Sbjct: 680 LFRSKVEEAFTVLTQA 695
>gi|296226907|ref|XP_002759113.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Callithrix jacchus]
Length = 604
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 260/629 (41%), Positives = 353/629 (56%), Gaps = 88/629 (13%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL V E+ L++ FS ++S+RVCRD SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPYVTEAMLFEKFSPAGPILSIRVCRDMITHRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSG------------------------------ 97
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
V D NG KGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 98 --VVCDENG-PKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGPFKSRKEREAELGAR 154
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 155 AKEFTNVYIKNFGEDMDDEHLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 214
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+ +NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 215 AVDVMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 274
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 275 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 333
Query: 383 AVAQRKEERKARL----QAQFAQIRA-------PGGMSP----LASGIPGYHHGAPRLGP 427
A+AQRKEER+A L + A +RA P +P + IP + A P
Sbjct: 334 ALAQRKEERQAHLTNLYMQRMASVRAVPNPLINPYQPAPPSAYFMAAIPQTQNRAAYYPP 393
Query: 428 QQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRTGVR 483
+Q+ + +P A + FQ PG + P P P+ R P + R
Sbjct: 394 RQIAQLRPSPRWTAQGARPHPFQN--MPGAIHPAAPR--PPFSTMRPASSQVPRVMSTQR 449
Query: 484 RSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVPVPFEVS 529
+ + Q + P+ +R Q +Y RN Q V+M
Sbjct: 450 VADTSTQTKGPRPAAAAAAATPAVRTVPQ-YKYAVGVRNPQQHLNAQPQVTM-------- 500
Query: 530 GMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
PA V+ P+ S LASA P ++ +MLGE L+PL++ + P A K+TGMLL
Sbjct: 501 QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGEWLFPLIQAMHPSLAGKITGMLL 554
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
E+D +E+LH++ESPE+L++KV EA+AVLQ
Sbjct: 555 EIDNSELLHILESPESLRSKVDEAVAVLQ 583
>gi|384251873|gb|EIE25350.1| polyadenylate binding protein [Coccomyxa subellipsoidea C-169]
Length = 681
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/439 (52%), Positives = 302/439 (68%), Gaps = 31/439 (7%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
N SLYVGDL+++V E+QL+++FSQ+ V S+RVCRD R SLGYAYVNY++ DAA A+
Sbjct: 23 NSSLYVGDLDRDVTEAQLFEIFSQIGPVASIRVCRDAVTRRSLGYAYVNYNSALDAAAAE 82
Query: 87 EA---LNFMPI--------NGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDT 135
A LN+ + + KP+RIM+SHRDP+ RKSG GN+FIKNLD IDNKAL DT
Sbjct: 83 RAIEALNYTSVIPGKEGGEDSKPMRIMWSHRDPAFRKSGVGNIFIKNLDKDIDNKALHDT 142
Query: 136 FAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ 195
F AFGT+LSCKVA D G SKGYGFV +E EEAAQ AI+ +NGML+ K+V+VG F++R
Sbjct: 143 FTAFGTILSCKVATDLAGNSKGYGFVHYEKEEAAQLAIEKVNGMLLEGKKVFVGPFLKRT 202
Query: 196 ERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQ 255
ER +TNV+V NL+E +TDE+++K+F G +TS +MKD GKS+ FGF+NF+
Sbjct: 203 ERPVDK-EQHYTNVFVKNLSENLTDEEVEKMFNEHGMVTSFAIMKDEAGKSKGFGFINFE 261
Query: 256 SPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLK 315
+ A AAV LNG + K Y GRAQK+AEREA+L+ KF++ R R K +G NLY+K
Sbjct: 262 DAEGAHAAVTALNGKEIDGKELYCGRAQKKAEREAELKQKFDEVRQERIAKYQGMNLYVK 321
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI 375
NL D ++D++L+ F+ GTITS KVM D G SKG GF +S PEEATRA+ EMNGKM+
Sbjct: 322 NLVDEVDDDQLRAEFAPHGTITSAKVMKDSAGKSKGFGFVCYSSPEEATRAVTEMNGKML 381
Query: 376 GRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQG 435
KP+YVA+AQR+E R+ +L+ Q+ Q R ++P+ SG P AP GP +
Sbjct: 382 LGKPMYVALAQRREVRRQQLEQQYTQQR----VAPM-SGRP----NAP--GPVPM----- 425
Query: 436 TPGLMPPQAAGYGFQQQVF 454
PG+ PP A F QQ F
Sbjct: 426 -PGVFPPNAV--SFPQQYF 441
>gi|308486599|ref|XP_003105496.1| CRE-PAB-2 protein [Caenorhabditis remanei]
gi|308255462|gb|EFO99414.1| CRE-PAB-2 protein [Caenorhabditis remanei]
Length = 730
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/466 (46%), Positives = 294/466 (63%), Gaps = 39/466 (8%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLY+GDL +V ES L++ FS V+S+RVCRD + R SLGYAYVN+ P DA
Sbjct: 52 YSMASLYIGDLHPDVTESMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAER 111
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I+G+P+RIM+S RDP+ R++G GN+FIKNLD IDNK++ DTF+ FG +LS
Sbjct: 112 ALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSIYDTFSLFGNILS 171
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKVA D G SKGYGFV FE E +A AI+ +NGML++DK+V+VG F R +R ++
Sbjct: 172 CKVATDEEGNSKGYGFVHFETEASALTAIEKVNGMLLSDKKVFVGKFQPRAQRMKELGES 231
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
K+TNV++ N + + ++ L ++F +G ITSA+VM D+ GK + FGFV F PDAA
Sbjct: 232 GLKYTNVFIKNFGDHLDEKKLTEMFSKYGEITSAVVMTDNSGKPKGFGFVAFVDPDAAIK 291
Query: 263 AVEKLNGTT--NNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNL 317
AV+ LN +T D V RAQK++ER A+L+ K+E QER+ RY+ G NLY+KN+
Sbjct: 292 AVDTLNESTLEGTDLKLSVCRAQKKSERTAELKRKYEALKQERVQRYQ---GVNLYVKNI 348
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
++ + D+ L+E F+ FG+ITS KVMVD++G SKG GF F PEEAT A+ EMN KMIG
Sbjct: 349 EEEMTDDGLREHFANFGSITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTEMNSKMIGA 408
Query: 378 KPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGY------------------- 418
KPLYVA+AQRKE+R+A+L +Q+ Q A M +G+PG
Sbjct: 409 KPLYVALAQRKEDRRAQLASQYMQRLATLRMGQQTNGVPGMTQIYQQGQQGYFMQNPMAV 468
Query: 419 ----HHGAPRLGPQQLYYGQGTPGLMPPQAAGYG------FQQQVF 454
H + + QG P PP A G F QVF
Sbjct: 469 SHPKHEHNINITITTFLWAQGRPAFQPPSAQIRGPPGQRMFNNQVF 514
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 52/76 (68%), Gaps = 3/76 (3%)
Query: 548 TLTS-ALASASPDDRTRMLGEQLYPLVENIEPVH--ASKVTGMLLEMDQTEVLHLIESPE 604
TLTS LA A+P ++ ++LGE++Y L+E + P H A K+TGM+LE+D E++ +++ +
Sbjct: 641 TLTSHMLAQAAPQEQKQLLGERIYALIEKMFPNHKEAGKITGMMLEIDNAELIMMLQDED 700
Query: 605 ALKTKVAEAMAVLQEA 620
++KV EA VL A
Sbjct: 701 LFRSKVEEAFTVLSNA 716
>gi|385305672|gb|EIF49630.1| polyadenylate-binding protein [Dekkera bruxellensis AWRI1499]
Length = 655
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 246/614 (40%), Positives = 346/614 (56%), Gaps = 50/614 (8%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL+ +V ES LY++FS+V QV S+RVCRB + SL YAYVNY ++A +A +
Sbjct: 60 ASLYVGDLDPSVTESDLYEIFSKVGQVSSIRVCRBAVTKKSLCYAYVNYQKREEAEHALD 119
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
L F I GK RIM+S RDPS+RK G GNVFIKNL IDNK L DTF+ FG +LSCK+
Sbjct: 120 TLAFCDIKGKQCRIMWSQRDPSMRKKGTGNVFIKNLHPDIDNKTLYDTFSTFGKILSCKI 179
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSPK 205
A D +G SKG+GFV +++ E+A+ AI+ +NGML+N+ +VYV + R++R Q +
Sbjct: 180 ATDEHGHSKGFGFVHYDDAESAKAAIENVNGMLLNNMEVYVAPHIPRKDRESKMQEMIKN 239
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
FTNVYV N +T++ L+++F +G +TS + D++GK+R FGFVNF+ AA AV+
Sbjct: 240 FTNVYVKNFGPEMTEDQLREMFEAYGKVTSTYLPTDNEGKARGFGFVNFEDHXEAAKAVD 299
Query: 266 KLN-GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
LN ++ YVGRAQK+ ERE LR +++Q R R K +G NL++KNLDD+I+D
Sbjct: 300 ALNEKELEGGRILYVGRAQKKREREESLRKQWQQARQERISKYQGVNLFVKNLDDTIDDT 359
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KLKE F+ +G ITS KVM + G S+G GF ++ PEEATRA+NEM+ +M+ KPLYVA+
Sbjct: 360 KLKEEFAPYGKITSAKVMTNDAGKSRGFGFVCYTKPEEATRAINEMHQRMVMGKPLYVAL 419
Query: 385 AQRKEERKARLQAQF--------AQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGT 436
AQRKE R +L QF Q GGM AP ++YGQ
Sbjct: 420 AQRKEVRHNQLSQQFQQRNQMRLQQAAVQGGMGQFV---------AP------MFYGQNA 464
Query: 437 PGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQ----RTGVRRSGNTHQ-- 490
G +PP AG + P G P +M R PGQ G R G Q
Sbjct: 465 -GFIPPMPAGV----RGAPFAGNGAPQMMMQQGASR---PGQGVPVSPGQFRVGPNGQPV 516
Query: 491 --MQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPIST 548
QP F N+ + + + P E G + V ++
Sbjct: 517 PMYMQPMF----NEYQQQQQQQQRYYQRQNHGNAPAGAEKKGDKPGEEQEAAATAVNSAS 572
Query: 549 LTSALASASPDDRTRMLGEQLYPLVENI----EPVHASKVTGMLLEMDQTEVLHLIESPE 604
L L +P+ + R LGE+LY +E + K+TGM+L MD ++L +++
Sbjct: 573 LADFLPKLAPEQQKRALGEELYAKIEATGKASDKEAVGKITGMMLSMDNKQILDMLKDDA 632
Query: 605 ALKTKVAEAMAVLQ 618
T+ +A++ +
Sbjct: 633 LFNTQFQQALSAYE 646
>gi|297274127|ref|XP_002800732.1| PREDICTED: polyadenylate-binding protein 1 [Macaca mulatta]
Length = 605
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 259/648 (39%), Positives = 361/648 (55%), Gaps = 97/648 (14%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS+ ++S+RVCRD R S YAYVN+ +P+DA
Sbjct: 8 YPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+R+SG
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRRSG------------------------------ 97
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
V D NG SKGYGFV FE EAA+ AI+ +NG L+ND++V+VG F R+ER +
Sbjct: 98 --VVCDENG-SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRKEREAELGAK 154
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +F NVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 155 AKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQK 214
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDD 319
AV+++NG N K YVGRAQK+ ER+ +L+ KFE Q+RI+RY+ + NLY+KNLDD
Sbjct: 215 AVDEMNGKELNGKHIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVV---NLYVKNLDD 271
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KP
Sbjct: 272 DIDDERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 330
Query: 380 LYVAVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGA 422
LYVA+AQRKEER+A L ++ Q +RA P G + +P + A
Sbjct: 331 LYVALAQRKEERQAHLTNEYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAVPQTQNRA 388
Query: 423 PRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVH---PGQR 479
P Q+ + +P A + FQ + G+RP P +P+ R P
Sbjct: 389 AYYPPSQIAQLRPSPCWTAQGARPHPFQNKPG-GIRPAAPR--LPFSTMRPTSSQVPRVM 445
Query: 480 TGVRRSGNTHQMQQPQ----FMRNSNQGIR------YLDNARNGTD----QSVVSMVPVP 525
+ R + + Q P+ + +R Y RN Q V+M
Sbjct: 446 STQRVANTSTQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNPQQHLNAQPQVTMQQSA 505
Query: 526 FEVSGMPATPVETPRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKV 584
V G TLT S LASA P ++ +MLGE+L+P ++ + P A K+
Sbjct: 506 VHVQGQ---------------ETLTASMLASAPPQEQKQMLGERLFPPIQAMHPTLAGKI 550
Query: 585 TGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGS 632
TGMLLE+D +E+LH++ESP++L++KV EA+AVLQ A+ + + S
Sbjct: 551 TGMLLEIDNSELLHMLESPQSLRSKVDEAVAVLQAHQAKEATQKAVNS 598
>gi|322698722|gb|EFY90490.1| poly(A) RNA binding protein [Metarhizium acridum CQMa 102]
Length = 742
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/498 (44%), Positives = 309/498 (62%), Gaps = 62/498 (12%)
Query: 5 GAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQS 64
GAA + A ++A P + SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD
Sbjct: 37 GAAGSEDASAPTPSSAAPHPQNSASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAV 96
Query: 65 KRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLD 124
R SLGYAYVNY++ D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLD
Sbjct: 97 TRRSLGYAYVNYNSTADGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLD 156
Query: 125 TSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDK 184
+IDNKAL DTFAAFG +LSCKVA D NG SKGYGFV +E +EAA AIK +NGML+N+K
Sbjct: 157 VAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAAHQAIKHVNGMLLNEK 216
Query: 185 QVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
+VYVG + +++R + + FTN+YV N++ +D++ +++F +G ITS+ + +D
Sbjct: 217 KVYVGHHIPKKDRQSKFEEMKANFTNIYVKNISTEASDDEFRELFEKYGDITSSSLARDQ 276
Query: 243 DGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
+GKSR FGFVNF + ++AA AVE+L+G + YVGRAQK+ ERE +LR +E R+
Sbjct: 277 EGKSRGFGFVNFTTHESAAKAVEELHGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLE 336
Query: 303 RYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGS---------- 352
+ K +G NLY+KNLDD ++DEKL+++F+EFG ITS KVM D S GS
Sbjct: 337 KANKYQGVNLYIKNLDDDVDDEKLRQMFAEFGPITSAKVMRDAP--SDGSDDDKEKEEDN 394
Query: 353 ------------------------------------GFAAFSMPEEATRALNEMNGKMIG 376
GF FS P++AT+A+ EMN +MI
Sbjct: 395 EKEPEAKEEAKETEEEDADKKADKKGDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMIN 454
Query: 377 RKPLYVAVAQRKEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYG 433
KPLYVA+AQRK+ RK++L+A Q+R + A+G+P + P ++YG
Sbjct: 455 GKPLYVALAQRKDVRKSQLEASIQARNQLRM--QQAAAAAGMPQQYMQPP------VFYG 506
Query: 434 QGTPGLMPPQAAGYGFQQ 451
Q PG +P G F Q
Sbjct: 507 Q-QPGFIPQGGRGMPFPQ 523
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 49/73 (67%)
Query: 547 STLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEAL 606
S L + LA A P + ++LGE ++P ++ I A K+TGMLLEM+ +E+++LIE AL
Sbjct: 647 SVLQAQLAGAQPAQQKQILGEIIFPKIQAINSELAGKITGMLLEMENSELVNLIEDDVAL 706
Query: 607 KTKVAEAMAVLQE 619
K KV EA+AV E
Sbjct: 707 KAKVDEALAVYDE 719
>gi|2935338|gb|AAC39368.1| poly(A) binding protein RB47 [Chlamydomonas reinhardtii]
Length = 623
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/431 (51%), Positives = 286/431 (66%), Gaps = 18/431 (4%)
Query: 7 AAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKR 66
A ++ +ATT + N SLYVGDLE++V E+QL++LFS V V S+RVCRD R
Sbjct: 2 ATTESSAPAATTQPASTPLANSSLYVGDLEKDVTEAQLFELFSSVGPVASIRVCRDAVTR 61
Query: 67 SSLGYAYVNYS---NPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
SLGYAYVNY+ +PQ A A E LN+ +NGKP+RIM+SHRDPS RKSG GN+FIKNL
Sbjct: 62 RSLGYAYVNYNSALDPQAADRAMETLNYHVVNGKPMRIMWSHRDPSARKSGVGNIFIKNL 121
Query: 124 DTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND 183
D +ID KAL DTF+AFG +LSCKVA D+NG SKGYGFV FE++ AA AI+ +N I
Sbjct: 122 DKTIDAKALHDTFSAFGKILSCKVATDANGVSKGYGFVHFEDQAAADRAIQTVNQKKIEG 181
Query: 184 KQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
K VYV F +R +R + +TNV+V NL + D++L K+ G ITSA+VMKD
Sbjct: 182 KIVYVAPFQKRADRPRARTL--YTNVFVKNLPADIGDDELGKMATEHGEITSAVVMKDDK 239
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
G S+ FGF+NF+ ++AA VE LN + K Y GRAQK+ EREA LR K E+ + R
Sbjct: 240 GGSKGFGFINFKDAESAAKCVEYLNEREMSGKTLYAGRAQKKTEREAMLRQKAEESKQER 299
Query: 304 YEKLKGANLYLKNL-DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEE 362
Y K + NLY+KNL D+ ++D+ L+ELF+ GTITSCKVM D G SKG GF F+ +E
Sbjct: 300 YLKYQSMNLYVKNLSDEEVDDDALRELFANSGTITSCKVMKDGSGKSKGFGFVCFTSHDE 359
Query: 363 ATR-ALNEMNGKMIGRKPLYVAVAQRKEERK-----ARLQAQF---AQIRAP---GGMSP 410
ATR + EMNGKM+ KPLYVA+AQRK+ R+ A +QA+ A R P GMSP
Sbjct: 360 ATRPPVTEMNGKMVKGKPLYVALAQRKDVRRATQLEANMQARMGMGAMSRPPNPMAGMSP 419
Query: 411 LASGIPGYHHG 421
+P + G
Sbjct: 420 YPGAMPFFAPG 430
>gi|225557655|gb|EEH05941.1| polyadenylate-binding protein [Ajellomyces capsulatus G186AR]
gi|240278336|gb|EER41843.1| polyadenylate-binding protein [Ajellomyces capsulatus H143]
gi|325096361|gb|EGC49671.1| polyadenylate-binding protein [Ajellomyces capsulatus H88]
Length = 784
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/504 (46%), Positives = 304/504 (60%), Gaps = 83/504 (16%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ +V E+ L++LFS + QV S+RVCRD R SLGYAYVNY+N D A
Sbjct: 54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 113
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I GKP RIM+S RDP++RK+G GNVFIKNLDT+IDNKAL DTFAAFG +LSCK
Sbjct: 114 EDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 173
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA D G SKGYGFV +E EAA NAIK +NGML+N+K+V+VG + +++R + +
Sbjct: 174 VAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKA 233
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFGFVNFQSPDAAAAA 263
FTNVYV NL V++E+ +++F +G ITSA + +D + GKSR FGFVNF ++AAAA
Sbjct: 234 NFTNVYVKNLDTEVSNEEFRELFEKYGEITSASISRDGETGKSRGFGFVNFVKHESAAAA 293
Query: 264 VEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIND 323
VE+LN + YVGRAQK+ ERE +LR + E R+ + K +G NLY+KNL D I+D
Sbjct: 294 VEELNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNLTDDIDD 353
Query: 324 EKLKELFSEFGTITSCKVMVD--------------------------------------- 344
EKL++LF FG ITS +VM D
Sbjct: 354 EKLRDLFISFGNITSARVMRDTAGDPGSESEKEKESANKENVKDEAKKESGEEDSADKSD 413
Query: 345 -------------QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEER 391
+ G SKG GF FS P+EA++A+ EMN +M+ KPLYVA+AQRK+ R
Sbjct: 414 KVEKSDSKNATEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKPLYVALAQRKDVR 473
Query: 392 KARLQAQF--------AQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQ 443
K++L+A Q+ A GMS P + P +YY G G +P
Sbjct: 474 KSQLEASIQARNTIRQQQVAAAAGMS------------QPFMQP-AVYYPPGQQGFIPAN 520
Query: 444 AA---GYGFQQQ---VFPGLRPGG 461
AA G F QQ V PG+ PGG
Sbjct: 521 AAQRGGMAFGQQPGMVIPGM-PGG 543
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 158/300 (52%), Gaps = 20/300 (6%)
Query: 108 PSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENE 166
PS + ++++ LD S+ L + F++ G V S +V D+ +S GY +V + N
Sbjct: 47 PSTTQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 106
Query: 167 EAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKI 226
+ A++ LN LI K + ++ +R ++ NV++ NL + ++ L
Sbjct: 107 ADGERALEDLNYTLIKGKPCRI-MWSQRDPALRKTGQ---GNVFIKNLDTAIDNKALHDT 162
Query: 227 FGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRA 286
F FG I S V +D G S+ +GFV++++ +AA A++ +NG N+K +VG +
Sbjct: 163 FAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKK 222
Query: 287 EREADLRAKFEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
+R+ S++E++K N+Y+KNLD +++E+ +ELF ++G ITS + D
Sbjct: 223 DRQ------------SKFEEMKANFTNVYVKNLDTEVSNEEFRELFEKYGEITSASISRD 270
Query: 345 -QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ G S+G GF F E A A+ E+N K + LYV AQ+K ER+ L+ Q R
Sbjct: 271 GETGKSRGFGFVNFVKHESAAAAVEELNDKEYKGQKLYVGRAQKKHEREEELRKQHEAAR 330
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 539 PRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVL 597
PR V TL AL++A P + +MLGE +YP ++ +P A K+TGMLLEMD E+L
Sbjct: 671 PRDESVGGPTLNLQALSAAPPAQQKQMLGEAIYPKIQAQQPELAGKITGMLLEMDNAELL 730
Query: 598 HLIESPEALKTKVAEAMAVLQE 619
L++ AL+ KV EA+ V E
Sbjct: 731 SLVDDDAALRAKVDEAINVYDE 752
>gi|440899695|gb|ELR50961.1| Polyadenylate-binding protein 1-like protein, partial [Bos
grunniens mutus]
Length = 618
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/390 (53%), Positives = 273/390 (70%), Gaps = 11/390 (2%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
GY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 7 GYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAE 66
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A + +NF I G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +L
Sbjct: 67 RALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNIL 126
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--N 201
SCKV D +G S+G+GFV FE EAAQNAI +NGML+ND++V+VG F R+ER +
Sbjct: 127 SCKVVCDEHG-SRGFGFVHFETHEAAQNAISTMNGMLLNDRKVFVGHFKSRREREVELGA 185
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
+ +FTN+YV NL V ++ L+ +F FG + S VM+D G SR FGFVNF+ + A
Sbjct: 186 RAMEFTNIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDVSGHSRGFGFVNFEKHEEAQ 245
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV +NG + ++ YVGRAQKR ER+ +L+ +FEQ + R + +G NLY+KNLDDSI
Sbjct: 246 KAVVNMNGREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSI 305
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DEKL++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG+++G KPLY
Sbjct: 306 DDEKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLY 364
Query: 382 VAVAQRKEERKARLQAQFAQ----IRAPGG 407
VA+A E RKA L Q+ Q +RA GG
Sbjct: 365 VALA---EGRKAILTNQYMQRLSTMRALGG 391
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 549 LTSALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALK 607
LT+++ +A+P ++ +M+GE+L+PLV N+ A K+TGMLLE+D +E+L ++ESPE+L
Sbjct: 556 LTASMLAAAPLHEQKQMIGERLFPLVYNVHAHLAGKITGMLLEIDNSELLLMLESPESLN 615
Query: 608 TKV 610
KV
Sbjct: 616 AKV 618
>gi|294892363|ref|XP_002774026.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239879230|gb|EER05842.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 636
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 263/649 (40%), Positives = 361/649 (55%), Gaps = 105/649 (16%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL+ +V E+ LY++F+ V V S+RVCRD R SLGYAYVN+ N DA A +
Sbjct: 35 SLYVGDLKPDVTEAMLYEVFNGVGPVASIRVCRDSVTRRSLGYAYVNFHNVADAERALDT 94
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LN+ PI GK RIM+SHRDP++RK+G NVF+KNLD +IDNKAL DTF+ FG +LSCKVA
Sbjct: 95 LNYSPIRGKQCRIMWSHRDPTLRKAGNANVFVKNLDKTIDNKALYDTFSLFGNILSCKVA 154
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP--KF 206
D +G+S+GYGFV FEN+E+A AI LNGM+I +K VYVG F + ERA+Q+ KF
Sbjct: 155 TDDDGKSRGYGFVHFENDESAHKAITKLNGMMIGEKAVYVGPFQKHAERAEQHGDEPRKF 214
Query: 207 TNVYVNNLAET-VTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
TNVY+ +L E+ T+ED++K F FG ITS + +D K R F FVN++ D+AA AVE
Sbjct: 215 TNVYIKHLPESWTTEEDVQKAFEEFGKITSVAI--QTDRKGRRFAFVNYEDFDSAAKAVE 272
Query: 266 KLNGTTNNDK-----------------------VWYVGRAQKRAEREADLRAKFEQERIS 302
+NG + YV RAQ + ER A+LR KF+ +
Sbjct: 273 AMNGKDMRTQEEIDAGKGEEESTEEGSDEMPEYKLYVTRAQTKTERSAELRNKFQAKNTE 332
Query: 303 RYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH-GFSKGSGFAAFSMPE 361
+ + NLY+KNL + ++DEKL+++F +FG ITS KVMVD++ G S+G GF F+
Sbjct: 333 KVGN-QSCNLYVKNLPEDVDDEKLRQMFEQFGEITSPKVMVDENTGVSRGFGFVCFANQA 391
Query: 362 EATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPG-YHH 420
+ +A+ M+ K+ G KPL+VAVA++++ R RLQ ++ GG G G +
Sbjct: 392 DGEKAIQAMHLKLYGGKPLFVAVAEKRDARIERLQQRYRAGIPMGGFQQNYQGYRGPRNF 451
Query: 421 GAPRLGPQQLYYGQGTPGLM-----------------------PPQAAGYGFQQQVFPGL 457
AP P +YY G P + GY + G
Sbjct: 452 NAP--NPSPMYYSGGQNRQGGMMQGPPGGFVGGPRGPMGAQRGPMMSGGYPVNR----GP 505
Query: 458 RPGGPNYIMPYHLQ-------RQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNA 510
RP GPN +MP + +Q PGQ+ G FM QG
Sbjct: 506 RPTGPN-MMPMNQPPRGNFPPQQRFPGQQGG-------------PFM--GQQG------- 542
Query: 511 RNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLY 570
M+P E MP P + P P+ +ALASA P + +MLGE+L+
Sbjct: 543 -----GMPPRMMP---EQHNMP-MPHQNPPPM------TAAALASAPPGLQKQMLGERLF 587
Query: 571 PLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
L+ +P A K+TGM+LEMD +E+L LI+S + L+ K+ EA+ VLQ
Sbjct: 588 TLISKYQPTLAGKITGMMLEMDNSELLMLIDSDQQLRMKIDEAVRVLQH 636
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 148/313 (47%), Gaps = 45/313 (14%)
Query: 26 GNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANA 85
GN +++V +L++ ++ LYD FS ++S +V D +S GY +V++ N + A A
Sbjct: 120 GNANVFVKNLDKTIDNKALYDTFSLFGNILSCKVATDDDGKSR-GYGFVHFENDESAHKA 178
Query: 86 KEALNFMPINGKPIRI--MYSHRDPSIRKSG----YGNVFIKNLDTSIDNKA-LCDTFAA 138
LN M I K + + H + + + + NV+IK+L S + + F
Sbjct: 179 ITKLNGMMIGEKAVYVGPFQKHAERAEQHGDEPRKFTNVYIKHLPESWTTEEDVQKAFEE 238
Query: 139 FGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGM-LINDKQVYVG-------- 189
FG + S VAI ++ + + + FV +E+ ++A A++ +NG + +++ G
Sbjct: 239 FGKITS--VAIQTDRKGRRFAFVNYEDFDSAAKAVEAMNGKDMRTQEEIDAGKGEEESTE 296
Query: 190 ----------LFVRR---------------QERAQQNVSPKFTNVYVNNLAETVTDEDLK 224
L+V R Q + + V + N+YV NL E V DE L+
Sbjct: 297 EGSDEMPEYKLYVTRAQTKTERSAELRNKFQAKNTEKVGNQSCNLYVKNLPEDVDDEKLR 356
Query: 225 KIFGHFGTITSAIVMKDSD-GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQ 283
++F FG ITS VM D + G SR FGFV F + A++ ++ K +V A+
Sbjct: 357 QMFEQFGEITSPKVMVDENTGVSRGFGFVCFANQADGEKAIQAMHLKLYGGKPLFVAVAE 416
Query: 284 KRAEREADLRAKF 296
KR R L+ ++
Sbjct: 417 KRDARIERLQQRY 429
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 98/191 (51%), Gaps = 25/191 (13%)
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAV 264
F ++YV +L VT+ L ++F G + S V +DS +S + +VNF + A A+
Sbjct: 33 FASLYVGDLKPDVTEAMLYEVFNGVGPVASIRVCRDSVTRRSLGYAYVNFHNVADAERAL 92
Query: 265 EKLNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
+ LN + K +W + R+ LR K AN+++KNLD +
Sbjct: 93 DTLNYSPIRGKQCRIMW--------SHRDPTLR------------KAGNANVFVKNLDKT 132
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
I+++ L + FS FG I SCKV D G S+G GF F E A +A+ ++NG MIG K +
Sbjct: 133 IDNKALYDTFSLFGNILSCKVATDDDGKSRGYGFVHFENDESAHKAITKLNGMMIGEKAV 192
Query: 381 YVAVAQRKEER 391
YV Q+ ER
Sbjct: 193 YVGPFQKHAER 203
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
G + +LYV +L ++V++ +L +F Q ++ S +V D++ S G+ +V ++N D
Sbjct: 335 GNQSCNLYVKNLPEDVDDEKLRQMFEQFGEITSPKVMVDENTGVSRGFGFVCFANQADGE 394
Query: 84 NAKEALNFMPINGKPIRIMYSH-RDPSIRK 112
A +A++ GKP+ + + RD I +
Sbjct: 395 KAIQAMHLKLYGGKPLFVAVAEKRDARIER 424
>gi|448519634|ref|XP_003868121.1| poly(A)-binding protein [Candida orthopsilosis Co 90-125]
gi|380352460|emb|CCG22686.1| poly(A)-binding protein [Candida orthopsilosis]
Length = 638
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 251/602 (41%), Positives = 353/602 (58%), Gaps = 46/602 (7%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L +VNE+ L+++FS + QV S+RVCRD + SLGYAYVNY +D A
Sbjct: 60 SASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKFEDGEKAI 119
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
+ LN+ I +P RIM+S RDPS R+SG GN+FIKNL +IDNKAL DTF+AFG +LSCK
Sbjct: 120 DELNYSLIENRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGRILSCK 179
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA D GQSK +GFV +E EAA+ AI+ +NGML+ND++VYVG V +++R + +
Sbjct: 180 VATDDLGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVYVGKHVSKKDRESKFEEMKA 239
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
+TN+YV N+ ++++ + +F +G ITS + KD DGKS+ FGFVN++ +A AV
Sbjct: 240 NYTNIYVKNIDLEFSEKEFEDLFAPYGKITSIYLEKDQDGKSKGFGFVNYEEHKSAVEAV 299
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
E LN N + YVGRAQK+ ER +L+ ++E R+ + K +G NL++KNLDD I+ E
Sbjct: 300 EALNDKEINGQKIYVGRAQKKRERTEELKKQYEAIRLEKLSKYQGVNLFVKNLDDQIDSE 359
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KL+E F FGTITS KVMVD G S+G GF FS PEEAT+A+ EMN +M+ KPLYVA+
Sbjct: 360 KLEEEFKPFGTITSAKVMVDDAGKSRGFGFVCFSTPEEATKAITEMNQRMVNGKPLYVAL 419
Query: 385 AQRKEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMP 441
AQRK+ R+++L+ Q Q+R + A+G PG + P +YYGQ G P
Sbjct: 420 AQRKDVRRSQLEQQIQARNQMRMQNAAA--AAGFPGQF-----MPP--MYYGQ--QGFFP 468
Query: 442 PQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSN 501
P G FP GPN P + R+ PGQ Q P+ +
Sbjct: 469 PGGRG----NAPFP-----GPN---PQMMMRRGQPGQ---------PFPEQWPRPGGPNG 507
Query: 502 QGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDR 561
Q + DQ + P V VP L + ++S P+ +
Sbjct: 508 QPVPVYGIPPQFPDQRAQQQQQQQQQRGYYPGQA-----GVKVPAKDLAAIISSVPPEQQ 562
Query: 562 TRMLGEQLYPLV----ENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVL 617
R+LGE+LYP + + EP A K+TGM+L ++ E+L L++ E +A+
Sbjct: 563 KRILGEELYPRIVATGKAQEPEAAGKITGMMLGLENQEILDLLDDDELFNNHFEDALTAY 622
Query: 618 QE 619
+E
Sbjct: 623 EE 624
>gi|363753804|ref|XP_003647118.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890754|gb|AET40301.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
Length = 580
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/440 (48%), Positives = 297/440 (67%), Gaps = 25/440 (5%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVG+L+ +V+E+ LYD+FS + V S+RVCRD +SLGYAYVN+ + + A E
Sbjct: 39 SLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGRKAIEQ 98
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LN+ I GKP RIM+S RDPS+RK G GN++IKNL +IDNK+L +TF+ FG +LSCKVA
Sbjct: 99 LNYTLIKGKPCRIMWSQRDPSLRKKGSGNIYIKNLHPAIDNKSLHETFSTFGNILSCKVA 158
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSPKF 206
D NG S+G+GFV FENE A++AI+ +NGML+ND++VYV V +++R + V KF
Sbjct: 159 TDDNGVSRGFGFVHFENESDARDAIEAVNGMLMNDQEVYVAWHVSKKDRQSKLEEVKAKF 218
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TN+YV N+ + E+ +++F +G ITSA++ KDS+GK R FGF+NF+ AA AV++
Sbjct: 219 TNIYVKNIDLETSQEEFEQLFSKYGKITSAVLEKDSEGKLRGFGFINFEDHSTAARAVDE 278
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
LN + + YVGRAQK+ ER+ +L+ ++E R+ + K +G NL++KNLDDSI+DEKL
Sbjct: 279 LNESDFRGQTLYVGRAQKKHERQQELKKQYETARLEKLAKYQGVNLFIKNLDDSIDDEKL 338
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
K+ F+ FGTITS KVM D+ G S+G GF FS PEEAT+A+ E N +++ KPLYVA+AQ
Sbjct: 339 KDEFAPFGTITSVKVMKDEAGSSRGFGFVCFSTPEEATKAITEKNQQLVAGKPLYVAIAQ 398
Query: 387 RKEERKARLQAQFAQIRAPGGM---------SPLASGIPG-------YHHGA-PRL---G 426
RKE R+ +L AQ QI+A M + +G+PG Y+ G PR+ G
Sbjct: 399 RKEVRRNQL-AQ--QIQARNQMRFQHANAAAAAAVAGLPGQFIPPPMYYGGIPPRVPFQG 455
Query: 427 PQQLYYGQGTPGLMPPQAAG 446
P G G +PPQ G
Sbjct: 456 PNPQMTGMPKNGAIPPQQFG 475
>gi|356572504|ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 636
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 262/642 (40%), Positives = 366/642 (57%), Gaps = 65/642 (10%)
Query: 17 TTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNY 76
+ AA P+ SLYVGDL +V++S L D FS+ + SVRVC+D S SL Y Y+N+
Sbjct: 6 SVAAAPA-----SLYVGDLHPDVSDSHLVDAFSEFKSLASVRVCKDSSTGKSLCYGYLNF 60
Query: 77 SNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTF 136
+PQDA A E N +NGK +R+M+S RDP RKS GN+F+KNL SIDN L D F
Sbjct: 61 VSPQDAIRAIELKNNSTLNGKAMRVMWSRRDPDARKSAIGNLFVKNLPESIDNAGLQDIF 120
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
+G +LS KV +G+SKGYGFVQFE+EE+++ AI+ LNG + DK++YVG FV++ +
Sbjct: 121 KKYGNILSSKVVTSEDGKSKGYGFVQFESEESSKVAIEKLNGYTVADKELYVGKFVKKSD 180
Query: 197 RAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQS 256
R ++TN+Y+ NL V++ L++ F FG I S ++ KD++G S+ FGFVN+ +
Sbjct: 181 RILPGPDARYTNLYMKNLDLDVSEATLQEKFSSFGKIVSLVIAKDNNGMSKGFGFVNYDN 240
Query: 257 PDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
PD A A+E +NG+ K+ YV RAQK+AERE L +FE+++ + K KG+N+Y+KN
Sbjct: 241 PDDAKKAMEAMNGSQLGSKILYVARAQKKAEREQILHHQFEEKQKEQILKYKGSNIYVKN 300
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
+DD ++DE+L++ FS GTITS K+M D G SKG GF FS PEEA +A+N +G M
Sbjct: 301 IDDHVSDEELRDHFSACGTITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNTFHGFMYH 360
Query: 377 RKPLYVAVAQRKEERK----ARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYY 432
KPLYVA+AQRKE+RK + Q A++ P + + SG P Y++ A
Sbjct: 361 GKPLYVALAQRKEDRKAQLQLQYAQQLARLSGP-STAIIPSGYPPYYYAA---------- 409
Query: 433 GQGTPGLMPPQAAGYGFQQQVFPGLRPG-GPNYIMPYHLQRQVHPGQRTGVRRSGNTHQM 491
G +PP+ AG +Q LRPG G N P Q P S NT Q
Sbjct: 410 -SGVISHVPPR-AGLMYQHL---ALRPGWGANGFAPPARSFQQSPVPAV----SNNTRQH 460
Query: 492 QQPQFMRNSN---QGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVP--- 545
+Q + N N QG N +GT + P S +T T + +P
Sbjct: 461 RQNRGKLNGNSIAQG-----NTHSGTYLPQAQQISQPVISSRDSSTQQRTGQARYIPSGR 515
Query: 546 ------------------------ISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHA 581
L S LA A+P+ + +LGE LY LV ++P A
Sbjct: 516 QRDVEKGSGSSSVGSNSGRGGSQGSEMLHSLLAGAAPEQQKEILGEHLYMLVHKLKPTLA 575
Query: 582 SKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAAR 623
+K+TGMLLEMD E+L L+ESPE+L KV EA+ VL+ + +
Sbjct: 576 AKITGMLLEMDNGELLLLLESPESLSAKVEEAVQVLKNSKTK 617
>gi|403216743|emb|CCK71239.1| hypothetical protein KNAG_0G01810 [Kazachstania naganishii CBS
8797]
Length = 596
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/482 (47%), Positives = 306/482 (63%), Gaps = 35/482 (7%)
Query: 2 EATGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCR 61
EAT A+ A++ A V S SLYVG+L+ +V+E+ LYDLFS + V S+RVCR
Sbjct: 25 EATPASTASSESQQAGDNDVTS----TSLYVGELDPSVSEALLYDLFSPIGSVASIRVCR 80
Query: 62 DQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIK 121
D ++SLGYAYVN+S+ + A E LN+ PI GK RIM+S RDPS+RK G+GN+FIK
Sbjct: 81 DAITKTSLGYAYVNFSDHEAGKQAIEKLNYTPIKGKLCRIMWSQRDPSLRKKGHGNIFIK 140
Query: 122 NLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLI 181
NL+ IDNKAL DTF+ FG +LS K+A D G+SKG+GFV FE E AA AI LNGML+
Sbjct: 141 NLNQDIDNKALFDTFSVFGNILSSKIATDETGKSKGFGFVHFEEESAANEAIDALNGMLL 200
Query: 182 NDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVM 239
N +++YV + R+ER Q FTNVYV N+ TDE+ K+ FG GT+TS +
Sbjct: 201 NGQEIYVAPHLTRKERDSQLEETKAHFTNVYVKNIDLETTDEEFKEFFGKIGTVTSVALE 260
Query: 240 KDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQE 299
+ DGK + FGFVN++ + A AVE+LNG D+ +VGRAQK+ ER L+ ++E
Sbjct: 261 RGPDGKLKGFGFVNYEDHNDAVKAVEELNGAEFKDQELFVGRAQKKYERIQSLKKQYEST 320
Query: 300 RISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSM 359
R+ + K +G NL++KNLDDSI+DEKL+E F+ FG ITS KVM ++G SKG GF FS
Sbjct: 321 RLEKMAKYQGVNLFVKNLDDSIDDEKLQEEFAPFGNITSVKVMRTENGKSKGFGFVCFSS 380
Query: 360 PEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGM---------SP 410
PEEAT+A+ E N +++ KPLYVA+AQRK+ R+++L AQ QI+A M +
Sbjct: 381 PEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQL-AQ--QIQARNQMRYQQATAAAAA 437
Query: 411 LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGY-GFQQQVFPGLRP----GGPNYI 465
A+GIPG + P Y G+MPP+ + G Q G+ P GP Y
Sbjct: 438 AAAGIPG------QFMPPMFY------GVMPPRGVPFNGPNPQQMNGVPPQQFRNGPMYG 485
Query: 466 MP 467
MP
Sbjct: 486 MP 487
>gi|358394883|gb|EHK44276.1| hypothetical protein TRIATDRAFT_79372 [Trichoderma atroviride IMI
206040]
Length = 746
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/510 (45%), Positives = 312/510 (61%), Gaps = 61/510 (11%)
Query: 4 TGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQ 63
TG +A ++ T A P + SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD
Sbjct: 35 TGVSAGAEDASAPTPTAAPHPQNSASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDA 94
Query: 64 SKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
R SLGYAYVNY++ D A E LN+ PI G+P RIM+S RDP++RK+G GNVFIKNL
Sbjct: 95 VTRRSLGYAYVNYNSTPDGEKALEELNYTPIKGRPCRIMWSQRDPALRKTGQGNVFIKNL 154
Query: 124 DTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND 183
D +IDNKAL DTFAAFG +LSCKVA D G SKGYGFV +E +EAA AIK +NGML+N+
Sbjct: 155 DVAIDNKALHDTFAAFGNILSCKVAQDETGASKGYGFVHYETDEAAAQAIKHVNGMLLNE 214
Query: 184 KQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD 241
K+VYVG + +++R + + FTNVYV N++ VTD + +++F +G +TS+ + +D
Sbjct: 215 KKVYVGYHIPKKDRQSKFEEMKANFTNVYVKNISPDVTDNEFRELFEKYGDVTSSSLARD 274
Query: 242 SDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERI 301
+GKSR FGFVNF + +AA AV++LNG + YVGRAQK+ ERE +LR +E R+
Sbjct: 275 QEGKSRGFGFVNFTTHEAAYKAVDELNGNDFRGQELYVGRAQKKHEREEELRKSYEAARL 334
Query: 302 SRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ---------------- 345
+ K +G NLY+KNLDD ++D+KL+++FSEFG ITS KVM D
Sbjct: 335 EKASKYQGVNLYIKNLDDDVDDDKLRQMFSEFGPITSAKVMRDSLQEGEEEVKDQEKDKE 394
Query: 346 ----------------------------HGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
G SKG GF FS P++AT+A+ EMN +MI
Sbjct: 395 NQKEAENEAEAESAENAEKKAEKKGDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMINN 454
Query: 378 KPLYVAVAQRKEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ 434
KPLYVA+AQRK+ RK++L+A Q+R + A+G+P P ++Y
Sbjct: 455 KPLYVALAQRKDVRKSQLEASIQARNQLRM--QQAAAAAGMPQQFMQPP------VFYAP 506
Query: 435 G-TPGLMPPQAAGYGFQQQVFP---GLRPG 460
G PG +P G F Q P G RPG
Sbjct: 507 GQQPGFIPQGGRGMPFPQPGMPLPQGGRPG 536
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%)
Query: 564 MLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
+LGE ++P ++ I A K+TGMLLEMD TE+++LIE ALK KV EA+AV E
Sbjct: 673 ILGELIFPKIQAINSELAGKITGMLLEMDNTELVNLIEDEAALKAKVDEALAVYDE 728
>gi|392574075|gb|EIW67212.1| hypothetical protein TREMEDRAFT_40410 [Tremella mesenterica DSM
1558]
Length = 666
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/401 (50%), Positives = 278/401 (69%), Gaps = 9/401 (2%)
Query: 16 ATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVN 75
++T A P G G SLYVG+L+ +V E+ L+++F+ + V S+RVCRD R SLGYAYVN
Sbjct: 29 SSTQAGPGGTG-ASLYVGELDPSVTEAMLFEIFNIIGPVASIRVCRDAVTRRSLGYAYVN 87
Query: 76 YSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDT 135
Y N D A E LN+ I G+P RIM+S RDP++RK+G GN+FIKNLD SIDNKAL DT
Sbjct: 88 YLNAADGERALEHLNYSAIKGRPCRIMWSQRDPALRKTGQGNIFIKNLDESIDNKALHDT 147
Query: 136 FAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ 195
FAAFG +LSCKV +D +G+S+G+ FV ++ EAA AIK ++GM++NDK+V+VG + ++
Sbjct: 148 FAAFGEILSCKVGVDEDGKSRGFAFVHYQTGEAADAAIKGVDGMMLNDKKVFVGHHIGKK 207
Query: 196 ERAQQNVSPK--FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVN 253
ER + + FTNV+V N+ +VT+++ + + FG S + D +GKS+ FGFVN
Sbjct: 208 ERQSKAEEQRAHFTNVFVKNVDLSVTEKEFEDLVSKFGETVSIALSLDEEGKSKGFGFVN 267
Query: 254 FQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLY 313
+ S +AA AV++LN N + + GRAQKR ER+ +LR E++R K G NLY
Sbjct: 268 YVSHEAAEKAVDELNDKEVNGQKLWAGRAQKRVERDTELRKTIEEKRQEFDAKSAGVNLY 327
Query: 314 LKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGK 373
+KNLDD +D++L+ F FGTITSCKVM D+ G S+ GF +S PEEAT+A++EMNGK
Sbjct: 328 VKNLDDEWDDDRLRAEFDSFGTITSCKVMKDERGVSRNFGFVCYSSPEEATKAVSEMNGK 387
Query: 374 MIGRKPLYVAVAQRKEERKARLQAQFAQIR------APGGM 408
MIG KPLYVA+AQR+E R+ L++Q AQ APGGM
Sbjct: 388 MIGSKPLYVALAQRREARRQALESQIAQRTNQRVPYAPGGM 428
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 50/68 (73%)
Query: 552 ALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVA 611
ALA A ++ +MLGE LYPL+ +P A K+TGMLLEMD +E+LHLIESP AL KV
Sbjct: 570 ALARAPLAEQKQMLGEALYPLIGATQPELAGKITGMLLEMDNSELLHLIESPPALLEKVD 629
Query: 612 EAMAVLQE 619
EA+ VL+E
Sbjct: 630 EALKVLEE 637
>gi|296203566|ref|XP_002748951.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Callithrix
jacchus]
Length = 604
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 264/647 (40%), Positives = 356/647 (55%), Gaps = 94/647 (14%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R S GYAYVN+ +P+DA
Sbjct: 8 YPMTSLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMFTRRSSGYAYVNFQHPKDAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF INGK +RIM+S RDPS+RKSG
Sbjct: 68 ALDTMNFDVINGKSVRIMWSQRDPSLRKSG------------------------------ 97
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
V D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 98 --VVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDQKVFVGRFKSRKEREAELGAR 154
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVYV N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 155 AKEFTNVYVKNFGEDMDDEHLKDLFGKFGPTLSVKVMTDERGKSKGFGFVSFERGEDAQK 214
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV++LNG + K YVGRAQK+ ER+ +L+ KFEQ + + + +G NLY+K LDD I+
Sbjct: 215 AVDELNGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDKITRYQGLNLYVKYLDDYID 274
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNGK++ KPLYV
Sbjct: 275 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGKIVATKPLYV 333
Query: 383 AVAQRKEERKARLQAQF----AQIRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L + A +RA P G + +P + A
Sbjct: 334 ALAQRKEERQAHLTNEHMHRTASVRAVPNPASKPYQPAPPSGY--FMAALPQTQNSAACS 391
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQR-------QVHPG 477
Q+ + +P P + FQ PG +RP P P+ R +V
Sbjct: 392 PASQITQLRPSPRWTAPSVRPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVSRVMST 447
Query: 478 Q---RTGVRRSGNTHQMQQPQFMRNSNQGIR--YLDNARNGTD----QSVVSMVPVPFEV 528
Q T + G + +R Y RN Q V+M V
Sbjct: 448 QCIANTSAQTVGPRPAAAAAAATPAVHTALRFKYAAGVRNPQQHFRAQPQVTMQQPAIHV 507
Query: 529 SGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGML 588
G A + +S L S A+P + +MLGE+L+PL++ P A K+TGML
Sbjct: 508 QGQEA----------LTVSMLVS----AAPQQQKQMLGERLFPLIQARRPTLAGKITGML 553
Query: 589 LEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
LEMD +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 554 LEMDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 600
>gi|322711066|gb|EFZ02640.1| poly(A) RNA binding protein [Metarhizium anisopliae ARSEF 23]
Length = 743
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/499 (44%), Positives = 308/499 (61%), Gaps = 62/499 (12%)
Query: 4 TGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQ 63
G A + A ++A P + SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD
Sbjct: 37 VGTAGSEDASAPTPSSAAPHPQNSASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDA 96
Query: 64 SKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
R SLGYAYVNY++ D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNL
Sbjct: 97 VTRRSLGYAYVNYNSTADGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNL 156
Query: 124 DTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND 183
D +IDNKAL DTFAAFG +LSCKVA D NG SKGYGFV +E +EAA AIK +NGML+N+
Sbjct: 157 DVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAAHQAIKHVNGMLLNE 216
Query: 184 KQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD 241
K+VYVG + +++R + + FTN+Y+ N++ +D++ +++F +G ITS+ + +D
Sbjct: 217 KKVYVGHHIPKKDRQSKFEEMKANFTNIYIKNISTEASDDEFRELFEKYGDITSSSLARD 276
Query: 242 SDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERI 301
+GKSR FGFVNF + ++AA AVE+L+G + YVGRAQK+ ERE +LR +E R+
Sbjct: 277 QEGKSRGFGFVNFTTHESAAKAVEELHGKDFRGQDLYVGRAQKKHEREEELRKSYEAARL 336
Query: 302 SRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGS--------- 352
+ K +G NLY+KNLDD ++DEKL+++F+EFG ITS KVM D S GS
Sbjct: 337 EKANKYQGVNLYIKNLDDDVDDEKLRQMFAEFGPITSAKVMRDAP--SDGSDDDKEKEED 394
Query: 353 -------------------------------------GFAAFSMPEEATRALNEMNGKMI 375
GF FS P++AT+A+ EMN +MI
Sbjct: 395 NEKEPEAKEEAKETEEEDADKKADKKGDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMI 454
Query: 376 GRKPLYVAVAQRKEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGAPRLGPQQLYY 432
KPLYVA+AQRK+ RK++L+A Q+R + A+G+P + P ++Y
Sbjct: 455 NGKPLYVALAQRKDVRKSQLEASIQARNQLRM--QQAAAAAGMPQQYMQPP------VFY 506
Query: 433 GQGTPGLMPPQAAGYGFQQ 451
GQ PG +P G F Q
Sbjct: 507 GQ-QPGFIPQGGRGMPFPQ 524
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%)
Query: 547 STLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEAL 606
S L S LA A P + ++LGE ++P ++ I A K+TGMLLEM+ +E+++LIE AL
Sbjct: 648 SVLQSQLAGAQPAQQKQILGEIIFPKIQAINSELAGKITGMLLEMENSELVNLIEDDVAL 707
Query: 607 KTKVAEAMAVLQE 619
K KV EA+AV E
Sbjct: 708 KAKVDEALAVYDE 720
>gi|169622264|ref|XP_001804541.1| hypothetical protein SNOG_14351 [Phaeosphaeria nodorum SN15]
gi|187608896|sp|Q0U1G2.3|PABP_PHANO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|160704734|gb|EAT78222.2| hypothetical protein SNOG_14351 [Phaeosphaeria nodorum SN15]
Length = 744
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/516 (44%), Positives = 305/516 (59%), Gaps = 75/516 (14%)
Query: 4 TGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQ 63
T AA+ + TTAA + + SLYVG+L+ +V E+ L++LFS + QV S+RVCRD
Sbjct: 24 TNVPAASGDAPTPTTAAQQAHQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDA 83
Query: 64 SKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
R SLGYAYVNY++ +D A E LN+ I GKP RIM+S RDP++RK+G GNVFIKNL
Sbjct: 84 VTRRSLGYAYVNYNSSEDGEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNL 143
Query: 124 DTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND 183
D +IDNKAL DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+N+
Sbjct: 144 DHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNE 203
Query: 184 KQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD 241
K+V+VG + ++ER + + FTN+YV N+ VTDED +++F G ITSA + +D
Sbjct: 204 KKVFVGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVTDEDFRELFEKHGDITSASIARD 263
Query: 242 SDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERI 301
GKSR FGFVN+ +AAA AV+ LN + YVGRAQK+ ERE +LR ++E R+
Sbjct: 264 DQGKSRGFGFVNYIRHEAAAVAVDHLNDIEFKGQKLYVGRAQKKHEREEELRKQYEAARL 323
Query: 302 SRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMV------------------ 343
+ K +G NLY+KNL+D ++DEKL+++F+ FGTITS KV++
Sbjct: 324 EKQSKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVILRDEEKKDEEEKEVKEEKK 383
Query: 344 ----------------DQHGFSKGSG-------------------FAAFSMPEEATRALN 368
+Q+G +G F FS P+EAT+A+
Sbjct: 384 EDEKKEDEEAKEGSSSEQNGEDTKAGDKVTIKGEKKILGKSKGFGFVCFSNPDEATKAVT 443
Query: 369 EMNGKMIGRKPLYVAVAQRKEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGAPRL 425
EMN KMI KPLYVA+AQRK+ RK +L+A Q+R GIP
Sbjct: 444 EMNQKMIEGKPLYVALAQRKDVRKNQLEATIQARNQLRMQQQQQQQFGGIP--------- 494
Query: 426 GPQQLYYGQG-TPGLMPPQAAGYGFQQQVFPGLRPG 460
Q++ G P + PP A G Q FP PG
Sbjct: 495 ---QMFIAPGQQPMMYPPGARG----QMPFPAGMPG 523
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%)
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
S L++A+P + +MLGE LYP + ++P A K+TGMLLEMD +E+++L AL+ KV
Sbjct: 653 SVLSAAAPGQQKQMLGEALYPKIHEMQPELAGKITGMLLEMDNSELINLTADESALRAKV 712
Query: 611 AEAMAVLQE 619
EAM+V E
Sbjct: 713 DEAMSVYDE 721
>gi|320591142|gb|EFX03581.1| polyadenylate-binding protein [Grosmannia clavigera kw1407]
Length = 780
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/517 (44%), Positives = 316/517 (61%), Gaps = 69/517 (13%)
Query: 10 TAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSL 69
TA T ++ AA P + SLYVG+L+++V E+ L++LFSQ+ V S+RVCRD R SL
Sbjct: 43 TAGPTPSSAAAHPQA--SASLYVGELDESVTEAMLFELFSQIGPVASIRVCRDAVTRRSL 100
Query: 70 GYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDN 129
GYAYVNY++ D A E LN+ I +P RIM+S RDP++RK+G GN+FIKNLD +IDN
Sbjct: 101 GYAYVNYNSTADGEKALEELNYTLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDAAIDN 160
Query: 130 KALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVG 189
KAL DTFAAFG +LSCKVA D +G SKGYGFV +E +EAAQ AIK +NGML+N+K+VYVG
Sbjct: 161 KALHDTFAAFGNILSCKVAQDEHGNSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYVG 220
Query: 190 LFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKS 246
+ +++R + + +TN+Y+ NL VTD++ +K+F +G +TS+ + +D + GKS
Sbjct: 221 HHIPKKDRQSKFEEMKANYTNIYIKNLHADVTDDEFRKLFEQYGAVTSSTIARDQETGKS 280
Query: 247 RCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK 306
R FGF+NF + ++AA AVE+LN + + YVGRAQK+ ERE +LR +E R + K
Sbjct: 281 RGFGFINFTTHESAAKAVEELNSREIHGQELYVGRAQKKHEREEELRKSYEAARQEKASK 340
Query: 307 LKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD---------------------- 344
G NLY+KNLDD ++DEKL+ELF+ +G ITS KVM +
Sbjct: 341 YVGVNLYIKNLDDEVDDEKLRELFAPYGPITSAKVMRETASESDEEGKETKETEEVKEVK 400
Query: 345 ----------------------------QHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
+ G SKG GF FS P++AT+A+ EMN +M+
Sbjct: 401 EEEEKPKVEGAAEGEADASGEKQAAARPKLGKSKGFGFVCFSNPDDATKAVTEMNQRMVS 460
Query: 377 RKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLA--SGIPGYHHGAPRL----GPQQL 430
KPLYVA+AQ+KE RK++L+A Q R M A +G+P + P++ G QQ
Sbjct: 461 GKPLYVAIAQKKEVRKSQLEASI-QARNTLRMQQAAAVAGLPQTYM-QPQVYYPPGQQQA 518
Query: 431 YYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMP 467
+ QG G+ PQ G G PG++ G P P
Sbjct: 519 FLPQGGRGMAFPQ-GGLG-----IPGVQGGRPGQFAP 549
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%)
Query: 561 RTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
+ ++LGE ++P ++N +P A K+TGMLLEMD E++HLIE ALK KV EA+ V Q+
Sbjct: 699 QKQILGEAIFPKIQNFQPELAGKITGMLLEMDNQELVHLIEDESALKAKVDEALGVYQD 757
>gi|354544113|emb|CCE40835.1| hypothetical protein CPAR2_108740 [Candida parapsilosis]
Length = 650
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/457 (48%), Positives = 298/457 (65%), Gaps = 27/457 (5%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L +VNE+ L+++FS + QV S+RVCRD + SLGYAYVNY +D A
Sbjct: 62 SASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNYHKFEDGEKAI 121
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
+ LN+ + G+P RIM+S RDPS R+SG GN+FIKNL +IDNKAL DTF+AFG +LSCK
Sbjct: 122 DELNYSLVEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGRILSCK 181
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA D GQSK +GFV +E EAA+ AI+ +NGML+ND++V+VG V +++R + +
Sbjct: 182 VATDDMGQSKCFGFVHYETGEAAEAAIENVNGMLLNDREVFVGKHVSKKDRESKFEEMKA 241
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
+TN+YV N+ T+++ +++F +G ITS + KD DGKS+ FGFVN++ +A AV
Sbjct: 242 NYTNIYVKNIDLGFTEKEFEELFAPYGKITSIYLEKDQDGKSKGFGFVNYEEHKSAVDAV 301
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
E LN N + YVGRAQK+ ER +L+ ++E R+ + K +G NL++KNLDD I+ E
Sbjct: 302 EALNDKEINGQKIYVGRAQKKRERTEELKKQYEAIRLEKLSKYQGVNLFIKNLDDQIDSE 361
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KL+E F FGTITS KVMVD G SKG GF FS PEEAT+A+ EMN +MI KPLYVA+
Sbjct: 362 KLEEEFKPFGTITSAKVMVDDAGKSKGFGFVCFSTPEEATKAITEMNQRMINGKPLYVAL 421
Query: 385 AQRKEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMP 441
AQRK+ R+++L+ Q Q+R + A G PG + P +YYGQ G P
Sbjct: 422 AQRKDVRRSQLEQQIQARNQMRMQNAAA--AGGFPGQF-----MPP--MYYGQ--QGFFP 470
Query: 442 PQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQ 478
P G FP GPN P + R+ PGQ
Sbjct: 471 PGGRG---NAAPFP-----GPN---PQMMMRRGQPGQ 496
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 542 VPVPISTLTSALASASPDDRTRMLGEQLYPLV----ENIEPVHASKVTGMLLEMDQTEVL 597
V VP L + ++S P+ + R+LGE+LYP + + EP A K+TGM+L ++ E+L
Sbjct: 554 VKVPAKELAAIISSVPPEQQKRILGEELYPRIVATGKAQEPEAAGKITGMMLGLENQEIL 613
Query: 598 HLIESPEALKTKVAEAMAVLQE 619
L++ E +A+ +E
Sbjct: 614 DLLDDDELFNNHFEDALTAYEE 635
>gi|451854943|gb|EMD68235.1| hypothetical protein COCSADRAFT_270468 [Cochliobolus sativus
ND90Pr]
Length = 749
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 231/514 (44%), Positives = 304/514 (59%), Gaps = 72/514 (14%)
Query: 4 TGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQ 63
T AAA A + T+AA + SLYVG+L+ +V E+ L++LFS + QV S+RVCRD
Sbjct: 24 TNVAAAQAEAPTPTSAAPAHNQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDA 83
Query: 64 SKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
R SLGYAYVNY++ +D A E LN+ I GKP RIM+S RDP++RK+G GNVFIKNL
Sbjct: 84 VTRRSLGYAYVNYNSSEDGEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNL 143
Query: 124 DTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND 183
D +IDNKAL DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+N+
Sbjct: 144 DHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNE 203
Query: 184 KQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD 241
K+V+VG + ++ER + + FTN+YV N+ V+DE+ +++F G ITSA + +D
Sbjct: 204 KKVFVGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVSDEEFRELFEKHGDITSASIARD 263
Query: 242 SDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERI 301
GKSR FGFVN+ +AA+AAV+ LN T + YVGRAQK+ ERE +LR ++E R+
Sbjct: 264 EQGKSRGFGFVNYIKHEAASAAVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAARL 323
Query: 302 SRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD----------------- 344
+ K +G NLY+KNL+D ++DEKL+++F+ FGTITS KVM D
Sbjct: 324 EKQSKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVMRDAMPAERSETPGDEKKEE 383
Query: 345 ---------------------------------QHGFSKGSGFA--AFSMPEEATRALNE 369
+ K GF FS P+EAT+A+ E
Sbjct: 384 AKEESEKTEESNEGADDKKDENKPGEKVTIKGEKKILGKSKGFGFVCFSNPDEATKAVTE 443
Query: 370 MNGKMIGRKPLYVAVAQRKEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGAPRLG 426
MN KMI KPLYVA+AQRK+ RK +L+A Q+R GIP
Sbjct: 444 MNQKMIEGKPLYVALAQRKDVRKNQLEATIQARNQLRMQQQQQQQFGGIP---------- 493
Query: 427 PQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPG 460
Q++ G +M P A G G Q FP PG
Sbjct: 494 --QMFIAPGQQPMMFP-AGGRG--QMPFPAGMPG 522
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 48/69 (69%)
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
SAL+ A+P + +MLGE LYP + ++P A K+TGMLLEMD +E+++L AL+ KV
Sbjct: 658 SALSGAAPGQQKQMLGEALYPKIAEMQPELAGKITGMLLEMDNSELINLTSDEAALRAKV 717
Query: 611 AEAMAVLQE 619
EAM+V E
Sbjct: 718 EEAMSVYDE 726
>gi|401409876|ref|XP_003884386.1| hypothetical protein NCLIV_047860 [Neospora caninum Liverpool]
gi|325118804|emb|CBZ54355.1| hypothetical protein NCLIV_047860 [Neospora caninum Liverpool]
Length = 763
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/447 (49%), Positives = 286/447 (63%), Gaps = 36/447 (8%)
Query: 19 AAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSN 78
AA + + + SLYVGDL Q+V E+ L+++F+ V V S+RVCRD R SLGYAYVNY
Sbjct: 75 AASAANFVSPSLYVGDLHQDVTEAMLFEVFNSVGPVTSIRVCRDTVTRRSLGYAYVNYQG 134
Query: 79 PQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAA 138
QDA + + LN+ I G+P RIM+ HRDPS+RKSG GN+F+KNLD +IDNKAL DTF+
Sbjct: 135 IQDAERSLDTLNYTVIKGQPCRIMWCHRDPSLRKSGNGNIFVKNLDKNIDNKALYDTFSL 194
Query: 139 FGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA 198
FG +LSCKVA+D NG SKGYGFV +ENEE+A++AI +NGMLI K VYVG F+RR ER
Sbjct: 195 FGNILSCKVAVDENGHSKGYGFVHYENEESARSAIDKVNGMLIGGKTVYVGPFIRRAER- 253
Query: 199 QQNVSPKFTNVYVNNLAETVTDE-DLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
K+TNVY+ N+ DE L++ F +G+ITS +V KD G R F F NF
Sbjct: 254 DNLAETKYTNVYIKNMPSAWEDEARLRETFAKYGSITSLVVRKDPKG--RLFAFCNFADH 311
Query: 258 DAAAAAVEKLNGTTNND-------------------------KVWYVGRAQKRAEREADL 292
D+A AAVE LNG D ++ +VG Q +A R A L
Sbjct: 312 DSAKAAVEALNGKRVTDAGAIKEGEDSGAEEKDEEGQKREGEQILFVGPHQSKAHRSAML 371
Query: 293 RAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGS 352
RAKFEQ R ++ +G NLY+KN+DDSI+DEKL++LF FG+ITS KVM D+ G S+
Sbjct: 372 RAKFEQMNQDRNDRFQGVNLYIKNMDDSIDDEKLRQLFEPFGSITSAKVMRDERGVSRCF 431
Query: 353 GFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLA 412
GF F PEEAT+A+ EM+ K++ KPLYV +A+R+E+R RLQ +F R P + P A
Sbjct: 432 GFVCFMSPEEATKAVTEMHLKLVKGKPLYVGLAERREQRLMRLQQRF---RLP-SLRP-A 486
Query: 413 SGIPGYHHGAPRLGPQQLYYGQGTPGL 439
+ +PG + A QL YG P L
Sbjct: 487 AALPG--NVAAAAAAAQLQYGGAAPQL 511
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 558 PDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVL 617
P + +MLGE+L+PL+ +P A K+TGM+LEMD E+L L+ES LK KV EA+ VL
Sbjct: 700 PSMQKQMLGEKLFPLIARYQPELAGKITGMMLEMDNAELLILLESEAQLKAKVDEALRVL 759
Query: 618 QEAA 621
Q+A+
Sbjct: 760 QQAS 763
>gi|402085655|gb|EJT80553.1| polyadenylate-binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 773
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 228/495 (46%), Positives = 307/495 (62%), Gaps = 61/495 (12%)
Query: 5 GAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQS 64
G A TA T ++ A P + SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD
Sbjct: 40 GDEADTAGATPSSAAPHPQA--SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAV 97
Query: 65 KRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLD 124
R SLGYAYVNY+ D A + LN+ I G+P RIM+S RDP++RK+G GNVFIKNLD
Sbjct: 98 TRRSLGYAYVNYNTTSDGEKALDELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLD 157
Query: 125 TSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDK 184
+IDNKAL DTFAAFG +LSCKVA D +G SKGYGFV +E +EAA AIK +NGML+N+K
Sbjct: 158 VAIDNKALHDTFAAFGNILSCKVAQDEHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEK 217
Query: 185 QVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
+VYVG + +++R + + FTN+YV N+ VTD+D + +F FG +TS+ + +D
Sbjct: 218 KVYVGHHIPKKDRQSKFEEMKANFTNIYVKNIQLDVTDDDFRALFEKFGHVTSSSLARDQ 277
Query: 243 D-GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERI 301
+ GKSR FGFVNF S + A+ AVE+LN + + YVGRAQK+ ERE +LR +E R
Sbjct: 278 ETGKSRGFGFVNFTSHEDASKAVEELNEKEFHGQNLYVGRAQKKHEREEELRRSYEAARQ 337
Query: 302 SRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD----------------- 344
+ K +G NLY+KNLDD ++D+KL++LFSEFG ITS KVM +
Sbjct: 338 EKASKYQGVNLYIKNLDDEVDDDKLRQLFSEFGPITSAKVMRETLAEGADEPEAKDAADA 397
Query: 345 --------------------------QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
+ G SKG GF F P++AT+A+ EMN +M+ K
Sbjct: 398 KENVKEDEEAAKTEGDEGDAKADKKPKLGKSKGFGFVCFGNPDDATKAVAEMNQRMVNGK 457
Query: 379 PLYVAVAQRKEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQG 435
PLYVA+AQRK+ RK +L+A Q+R + A+G+P AP ++YG G
Sbjct: 458 PLYVALAQRKDVRKNQLEASIQARNQLRM--QQAAAAAGMPQQFMQAP------VFYGPG 509
Query: 436 T-PGLMPPQAAGYGF 449
+ PG MPP A G G
Sbjct: 510 SQPGFMPP-AGGRGM 523
>gi|452001105|gb|EMD93565.1| hypothetical protein COCHEDRAFT_1096208 [Cochliobolus
heterostrophus C5]
Length = 749
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 231/514 (44%), Positives = 304/514 (59%), Gaps = 72/514 (14%)
Query: 4 TGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQ 63
T AAA A + T+AA + SLYVG+L+ +V E+ L++LFS + QV S+RVCRD
Sbjct: 24 TNVAAAQAEAPTPTSAAPAHNQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDA 83
Query: 64 SKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
R SLGYAYVNY++ +D A E LN+ I GKP RIM+S RDP++RK+G GNVFIKNL
Sbjct: 84 VTRRSLGYAYVNYNSSEDGEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNL 143
Query: 124 DTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND 183
D +IDNKAL DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+N+
Sbjct: 144 DHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNE 203
Query: 184 KQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD 241
K+V+VG + ++ER + + FTN+YV N+ V+DE+ +++F G ITSA + +D
Sbjct: 204 KKVFVGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVSDEEFRELFEKHGDITSASIARD 263
Query: 242 SDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERI 301
GKSR FGFVN+ +AA+AAV+ LN T + YVGRAQK+ ERE +LR ++E R+
Sbjct: 264 EQGKSRGFGFVNYIKHEAASAAVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAARL 323
Query: 302 SRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD----------------- 344
+ K +G NLY+KNL+D ++DEKL+++F+ FGTITS KVM D
Sbjct: 324 EKQSKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVMRDAMPAERSETPGDEKKEE 383
Query: 345 ---------------------------------QHGFSKGSGFA--AFSMPEEATRALNE 369
+ K GF FS P+EAT+A+ E
Sbjct: 384 SKEEAEKTEESKEGADDKKDENKPGEKVTIKGEKKILGKSKGFGFVCFSNPDEATKAVTE 443
Query: 370 MNGKMIGRKPLYVAVAQRKEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGAPRLG 426
MN KMI KPLYVA+AQRK+ RK +L+A Q+R GIP
Sbjct: 444 MNQKMIEGKPLYVALAQRKDVRKNQLEATIQARNQLRMQQQQQQQFGGIP---------- 493
Query: 427 PQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPG 460
Q++ G +M P A G G Q FP PG
Sbjct: 494 --QMFIAPGQQPMMFP-AGGRG--QMPFPAGMPG 522
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 48/69 (69%)
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
SAL+ A+P + +MLGE LYP + ++P A K+TGMLLEMD +E+++L AL+ KV
Sbjct: 658 SALSGAAPGQQKQMLGEALYPKIAEMQPELAGKITGMLLEMDNSELINLTSDEAALRAKV 717
Query: 611 AEAMAVLQE 619
EAM+V E
Sbjct: 718 EEAMSVYDE 726
>gi|67527154|ref|XP_661604.1| hypothetical protein AN4000.2 [Aspergillus nidulans FGSC A4]
gi|40740281|gb|EAA59471.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 711
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 237/546 (43%), Positives = 317/546 (58%), Gaps = 73/546 (13%)
Query: 8 AATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRS 67
A VT+ A S + SLYVG+L+ +V E+ LY+LFS + QV S+RVCRD R
Sbjct: 22 APAPEVTAVEAPATTSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRR 81
Query: 68 SLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSI 127
SLGYAYVNY++ A + LN+ I GKP RIM+S RDP++RK+G GNVFIKNLD++I
Sbjct: 82 SLGYAYVNYNDTAHGERALDELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAI 141
Query: 128 DNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVY 187
DNKAL DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+NDK+V+
Sbjct: 142 DNKALHDTFAAFGNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVF 201
Query: 188 VGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK 245
VG + +++R + + FTN+Y+ N+ V DE+ +K+F FG ITSA + +DS+GK
Sbjct: 202 VGHHISKKDRQSKFEEMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEGK 261
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYE 305
SR FGFVNF + ++A AAVE++N + YVGRAQK+ ERE +LR ++E R+ +
Sbjct: 262 SRGFGFVNFSTHESAQAAVEEMNDKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKAS 321
Query: 306 KLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH------------------- 346
K +G NLY+KNL D ++D+KL+ELF +GTITS KVM D
Sbjct: 322 KYQGVNLYVKNLTDDVDDDKLRELFGPYGTITSAKVMRDTAPVETATPESETKESANKEN 381
Query: 347 --------------------------------GFSKGSGFAAFSMPEEATRALNEMNGKM 374
G SKG GF FS P+EA++A+ EMN +M
Sbjct: 382 EKAAEGEKEPAAEEKEKEEKKEAEQKPEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRM 441
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ 434
+ KPLYVA+AQRK+ R+++L+A A+ G + AP ++YG
Sbjct: 442 VNGKPLYVALAQRKDVRRSQLEASIQARNNIRQQQAAAAAGMGQAYMAP-----AVFYGP 496
Query: 435 GTPGLMPPQAAGYGFQQQVFPGL---RPGGP-NYIMPYHLQRQVHPGQRTGVRRSGNTHQ 490
G G +P G F Q PG+ PG P Y P+ PGQ+ G R +Q
Sbjct: 497 GQQGFIPGAQRGGMFPPQ--PGMMMGMPGRPGQYPGPF-------PGQQGG--RGVGPNQ 545
Query: 491 MQQPQF 496
P F
Sbjct: 546 QIPPNF 551
>gi|158563873|sp|Q5B630.2|PABP_EMENI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|259481418|tpe|CBF74916.1| TPA: Polyadenylate-binding protein, cytoplasmic and nuclear
(Poly(A)-binding protein)(PABP)(Polyadenylate
tail-binding protein)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B630] [Aspergillus
nidulans FGSC A4]
Length = 732
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 237/546 (43%), Positives = 317/546 (58%), Gaps = 73/546 (13%)
Query: 8 AATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRS 67
A VT+ A S + SLYVG+L+ +V E+ LY+LFS + QV S+RVCRD R
Sbjct: 22 APAPEVTAVEAPATTSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRR 81
Query: 68 SLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSI 127
SLGYAYVNY++ A + LN+ I GKP RIM+S RDP++RK+G GNVFIKNLD++I
Sbjct: 82 SLGYAYVNYNDTAHGERALDELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAI 141
Query: 128 DNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVY 187
DNKAL DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+NDK+V+
Sbjct: 142 DNKALHDTFAAFGNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVF 201
Query: 188 VGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK 245
VG + +++R + + FTN+Y+ N+ V DE+ +K+F FG ITSA + +DS+GK
Sbjct: 202 VGHHISKKDRQSKFEEMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEGK 261
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYE 305
SR FGFVNF + ++A AAVE++N + YVGRAQK+ ERE +LR ++E R+ +
Sbjct: 262 SRGFGFVNFSTHESAQAAVEEMNDKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKAS 321
Query: 306 KLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH------------------- 346
K +G NLY+KNL D ++D+KL+ELF +GTITS KVM D
Sbjct: 322 KYQGVNLYVKNLTDDVDDDKLRELFGPYGTITSAKVMRDTAPVETATPESETKESANKEN 381
Query: 347 --------------------------------GFSKGSGFAAFSMPEEATRALNEMNGKM 374
G SKG GF FS P+EA++A+ EMN +M
Sbjct: 382 EKAAEGEKEPAAEEKEKEEKKEAEQKPEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRM 441
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ 434
+ KPLYVA+AQRK+ R+++L+A A+ G + AP ++YG
Sbjct: 442 VNGKPLYVALAQRKDVRRSQLEASIQARNNIRQQQAAAAAGMGQAYMAP-----AVFYGP 496
Query: 435 GTPGLMPPQAAGYGFQQQVFPGL---RPGGP-NYIMPYHLQRQVHPGQRTGVRRSGNTHQ 490
G G +P G F Q PG+ PG P Y P+ PGQ+ G R +Q
Sbjct: 497 GQQGFIPGAQRGGMFPPQ--PGMMMGMPGRPGQYPGPF-------PGQQGG--RGVGPNQ 545
Query: 491 MQQPQF 496
P F
Sbjct: 546 QIPPNF 551
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 544 VPISTLTS-ALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIES 602
P+ LT+ AL++A P + +MLGE LYP ++ +P A K+TGMLLEMD TE+L L+E
Sbjct: 628 TPVGVLTAQALSAAPPQQQKQMLGEALYPKIQATQPELAGKITGMLLEMDNTELLGLLED 687
Query: 603 PEALKTKVAEAMAVLQE 619
EAL+ KV EA++V E
Sbjct: 688 DEALRAKVDEALSVYDE 704
>gi|358058232|dbj|GAA95909.1| hypothetical protein E5Q_02567 [Mixia osmundae IAM 14324]
Length = 614
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/386 (52%), Positives = 269/386 (69%), Gaps = 7/386 (1%)
Query: 51 VAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSI 110
+ V S+RVCRD R SLGYAYVN+ N D A E LN+ PI GKP RIM+S RDP++
Sbjct: 2 IGSVASIRVCRDAVTRRSLGYAYVNFMNAADGERALEQLNYTPIKGKPCRIMWSQRDPAL 61
Query: 111 RKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQ 170
RK+ GN+FIKNLD SIDNKAL DTFAAFG +LSCKVA+D NG SKGYGFV +E EAA+
Sbjct: 62 RKTSLGNIFIKNLDESIDNKALHDTFAAFGNILSCKVALDENGLSKGYGFVHYEGGEAAE 121
Query: 171 NAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFG 228
AI+ +NGML+NDK VYVG V R+ER + V +TN+YV LA +++ + ++F
Sbjct: 122 AAIQAVNGMLLNDKVVYVGHHVPRRERQAKIDEVRSNYTNLYVKGLAPEISEAEFSELFA 181
Query: 229 HFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAER 288
+G +TSA++ D DGKS+ FGFVNF +AAA A+ +L+ + + + YV RAQK+ ER
Sbjct: 182 KYGQVTSAVLQVDQDGKSKGFGFVNFADHEAAAKALTELHDSEHKGQTLYVSRAQKKGER 241
Query: 289 EADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGF 348
E +L+ +EQ++ + K +G NLY+KNL+D +++EK+ F+ FGTITS K+M D+ G
Sbjct: 242 EEELKKSYEQQKYDKSLKYQGVNLYVKNLEDDMDEEKVTAEFAAFGTITSTKIMRDEKGA 301
Query: 349 SKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGM 408
SKG GF FS P+EAT+A+ E+NGKM G+KPLYV++AQRK+ RK +L+AQ AQ
Sbjct: 302 SKGFGFVCFSSPDEATKAVTELNGKMFGQKPLYVSLAQRKDVRKQQLEAQLAQRNQIRSQ 361
Query: 409 SPLASGIPGYH--HGAPRLGPQQLYY 432
ASGIP +G P P Q+YY
Sbjct: 362 QLAASGIPPNMPPYGMP---PNQMYY 384
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 21/202 (10%)
Query: 16 ATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVN 75
A V S Y N LYV L ++E++ +LF++ QV S + DQ +S G+ +VN
Sbjct: 150 AKIDEVRSNYTN--LYVKGLAPEISEAEFSELFAKYGQVTSAVLQVDQDGKSK-GFGFVN 206
Query: 76 YSNPQDAANAKEALNFMPINGKPIRIMYSHR-----------------DPSIRKSGYGNV 118
+++ + AA A L+ G+ + + + + D S++ G N+
Sbjct: 207 FADHEAAAKALTELHDSEHKGQTLYVSRAQKKGEREEELKKSYEQQKYDKSLKYQGV-NL 265
Query: 119 FIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNG 178
++KNL+ +D + + FAAFGT+ S K+ D G SKG+GFV F + + A A+ LNG
Sbjct: 266 YVKNLEDDMDEEKVTAEFAAFGTITSTKIMRDEKGASKGFGFVCFSSPDEATKAVTELNG 325
Query: 179 MLINDKQVYVGLFVRRQERAQQ 200
+ K +YV L R+ R QQ
Sbjct: 326 KMFGQKPLYVSLAQRKDVRKQQ 347
>gi|1616770|gb|AAB16848.1| putative poly(A)-binding protein FabM [Emericella nidulans]
Length = 705
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 237/546 (43%), Positives = 317/546 (58%), Gaps = 73/546 (13%)
Query: 8 AATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRS 67
A VT+ A S + SLYVG+L+ +V E+ LY+LFS + QV S+RVCRD R
Sbjct: 22 APAPEVTAVEAPATTSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRR 81
Query: 68 SLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSI 127
SLGYAYVNY++ A + LN+ I GKP RIM+S RDP++RK+G GNVFIKNLD++I
Sbjct: 82 SLGYAYVNYNDTAHGERALDELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAI 141
Query: 128 DNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVY 187
DNKAL DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+NDK+V+
Sbjct: 142 DNKALHDTFAAFGNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVF 201
Query: 188 VGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK 245
VG + +++R + + FTN+Y+ N+ V DE+ +K+F FG ITSA + +DS+GK
Sbjct: 202 VGHHISKKDRQSKFEEMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEGK 261
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYE 305
SR FGFVNF + ++A AAVE++N + YVGRAQK+ ERE +LR ++E R+ +
Sbjct: 262 SRGFGFVNFSTHESAQAAVEEMNDKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKAS 321
Query: 306 KLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH------------------- 346
K +G NLY+KNL D ++D+KL+ELF +GTITS KVM D
Sbjct: 322 KYQGVNLYVKNLTDDVDDDKLRELFGPYGTITSAKVMRDTAPVETATPESETKESANKEN 381
Query: 347 --------------------------------GFSKGSGFAAFSMPEEATRALNEMNGKM 374
G SKG GF FS P+EA++A+ EMN +M
Sbjct: 382 EKAAEGEKEPAAEEKEKEEEKEAEQKPEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRM 441
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ 434
+ KPLYVA+AQRK+ R+++L+A A+ G + AP ++YG
Sbjct: 442 VNGKPLYVALAQRKDVRRSQLEASIQARNNIRQQQAAAAAGMGQAYMAP-----AVFYGP 496
Query: 435 GTPGLMPPQAAGYGFQQQVFPGL---RPGGP-NYIMPYHLQRQVHPGQRTGVRRSGNTHQ 490
G G +P G F Q PG+ PG P Y P+ PGQ+ G R +Q
Sbjct: 497 GQQGFIPGAQRGGMFPPQ--PGMMMGMPGRPGQYPGPF-------PGQQGG--RGVGPNQ 545
Query: 491 MQQPQF 496
P F
Sbjct: 546 QIPPNF 551
>gi|351695842|gb|EHA98760.1| Polyadenylate-binding protein 1 [Heterocephalus glaber]
Length = 709
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 253/591 (42%), Positives = 341/591 (57%), Gaps = 81/591 (13%)
Query: 82 AANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGT 141
A A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG
Sbjct: 155 AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 214
Query: 142 VLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ- 200
+LSCKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 215 ILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 273
Query: 201 -NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDA 259
+ +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ +
Sbjct: 274 GARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHED 333
Query: 260 AAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDD 319
A AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD
Sbjct: 334 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 393
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
I+DE+L++ FS FGTITS K EEAT+A+ EMNG+++ KP
Sbjct: 394 GIDDERLRKEFSPFGTITSAKNS------------------EEATKAVTEMNGRIVATKP 435
Query: 380 LYVAVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGA 422
LYVA+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 436 LYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRA 493
Query: 423 PRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQ 478
P Q+ + +P A + FQ PG +RP P P+ R P
Sbjct: 494 AYYPPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRV 549
Query: 479 RTGVRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNG----TDQSVVSMVPV 524
+ R + + Q P+ +R Q +Y RN Q V+M
Sbjct: 550 MSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNTQPQVTM--- 605
Query: 525 PFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKV 584
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+
Sbjct: 606 -----QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKI 654
Query: 585 TGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 655 TGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 705
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 42/205 (20%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + +++++ +L DLF + +SV+V D+S +S G+ +V++ +DA A +
Sbjct: 281 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 339
Query: 88 ALNFMPINGKPIRIMYSHR-----------------DPSIRKSGYGNVFIKNLDTSIDNK 130
+N +NGK I + + + D R G N+++KNLD ID++
Sbjct: 340 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDE 398
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L F+ FGT+ S K N E A A+ +NG ++ K +YV L
Sbjct: 399 RLRKEFSPFGTITSAK------------------NSEEATKAVTEMNGRIVATKPLYVAL 440
Query: 191 FVRRQERAQQNVSPKFTNVYVNNLA 215
R++ER TN Y+ +A
Sbjct: 441 AQRKEERQAH-----LTNQYMQRMA 460
>gi|444321552|ref|XP_004181432.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
gi|387514476|emb|CCH61913.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
Length = 577
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/473 (47%), Positives = 307/473 (64%), Gaps = 29/473 (6%)
Query: 12 AVTSATTA--AVPSGYGNV--SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRS 67
A T ATTA A NV SLYVG+L+ +V+E+ LYD+FS + V S+RVCRD ++
Sbjct: 23 AATPATTAIEAESPNVENVTASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKT 82
Query: 68 SLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSI 127
SLGYAYVN+++ + A E LN+ I G+P RIM+S RDPS+RK G GN+FIKNL I
Sbjct: 83 SLGYAYVNFNDHEAGKTAIEKLNYTAIKGRPCRIMWSQRDPSMRKKGSGNIFIKNLHPDI 142
Query: 128 DNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVY 187
DNK L +TF+ FG +LSCK+A D G+SKG+GFV FENEEAA+ AI +NGML+N ++VY
Sbjct: 143 DNKTLYETFSVFGNILSCKIANDETGKSKGFGFVHFENEEAAREAIDAINGMLLNGQEVY 202
Query: 188 VGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK 245
V V +++R + FTNVYV NL T+ED + +F +GTITS + KD++GK
Sbjct: 203 VAPHVSKKDRQSKLDEARANFTNVYVKNLDLEATEEDFENLFKPYGTITSVALEKDAEGK 262
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYE 305
SR FGFV+F++ + A AVE LN T + YVGRAQK+ ER +L+ +++ ++ +
Sbjct: 263 SRGFGFVDFENHEDAVKAVEALNDTEYKGQTLYVGRAQKKYERLQELKKQYQASKLEKLA 322
Query: 306 KLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATR 365
K +G NL++KNLDDSI+DEKLKE F+ FGTITS +VM ++G SKG GF FS PEEATR
Sbjct: 323 KYQGINLFIKNLDDSIDDEKLKEEFAPFGTITSARVMRTENGKSKGFGFVCFSTPEEATR 382
Query: 366 ALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFA---QIR---APGGMSPLASGIPGYH 419
A+ E N +++ KPLYVA+AQRK+ R+++L Q Q+R A + A+GIPG
Sbjct: 383 AITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQARNQMRYQQATAAAAAAAAGIPG-- 440
Query: 420 HGAPRLGPQQLYYGQGTPGLMPPQAAGY-GFQQQVFPGLRP----GGPNYIMP 467
+ P Y G++PP+ + G Q G+ P GP Y MP
Sbjct: 441 ----QFMPPMFY------GVVPPRGMPFNGPNPQQLGGMPPQQFRNGPAYGMP 483
>gi|308499747|ref|XP_003112059.1| CRE-PAB-1 protein [Caenorhabditis remanei]
gi|308268540|gb|EFP12493.1| CRE-PAB-1 protein [Caenorhabditis remanei]
Length = 695
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/487 (47%), Positives = 296/487 (60%), Gaps = 64/487 (13%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQD- 81
S Y SLYVGDL +VNES L++ FS V+S+RVCRD + R SLGYAYVN+ P D
Sbjct: 27 SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADG 86
Query: 82 ---------------AANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTS 126
A A + +NF ++GKP+RIM+S RDP++R+SG GN+FIKNLD
Sbjct: 87 KSFFQFMSFLTFLITAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKV 146
Query: 127 IDNKALCDTFAAFGTVLSCK-----------VAIDSNGQSKGYGFVQFENEEAAQNAIKM 175
IDNK++ DTF+ FG +LSCK VAID G SKGYGFV FE EEAAQNAI+
Sbjct: 147 IDNKSIYDTFSLFGNILSCKVTFPIEHLKTVVAIDDEGSSKGYGFVHFETEEAAQNAIQK 206
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQN-----VSPKFTNVYVNNLAETVTDEDLKKIFGHF 230
+NGML+ K+V+VG F Q RAQ+N + KFTNVYV N + E L+K+F +
Sbjct: 207 VNGMLLAGKKVFVGKF---QPRAQRNRELGETAKKFTNVYVKNFGDHYNKETLEKLFAKY 263
Query: 231 GTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTT--NNDKVWYVGRAQKRAER 288
G ITS VM SDGKS+ FGFV F P+ A AAV+ LN + +D +V RAQK++ER
Sbjct: 264 GAITSCDVMT-SDGKSKGFGFVAFAQPEEAEAAVQALNDSAVDGSDLKLHVCRAQKKSER 322
Query: 289 EADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCK-------- 340
A+L+ K EQ ++ R +K +G NLY+KNLD+S++DE LK+ F FG ITS K
Sbjct: 323 HAELKKKHEQHKVERMQKYQGVNLYVKNLDESVDDEALKKQFENFGNITSAKVGLVPLEF 382
Query: 341 ------VMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKAR 394
VM D++G SKG GF F PEEAT A+ EMN KM+ KPLYVA+AQRKE+R+A+
Sbjct: 383 FISLFQVMTDENGRSKGFGFVCFEKPEEATTAVTEMNSKMVCSKPLYVALAQRKEDRRAQ 442
Query: 395 LQAQFAQIRAP---------GGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAA 445
L +Q+ Q A GGM A PGY+ P QQ G P + P
Sbjct: 443 LASQYMQRLASMRMHSNVPGGGMYNPAQTGPGYYVANPM---QQQRNFAGGPQIARPGGG 499
Query: 446 GYGFQQQ 452
+G Q Q
Sbjct: 500 RWGQQNQ 506
>gi|154275140|ref|XP_001538421.1| polyadenylate-binding protein [Ajellomyces capsulatus NAm1]
gi|150414861|gb|EDN10223.1| polyadenylate-binding protein [Ajellomyces capsulatus NAm1]
Length = 732
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 231/504 (45%), Positives = 302/504 (59%), Gaps = 83/504 (16%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ +V E+ L++LFS + QV S+RVCRD R SLGYAYVNY+N D A
Sbjct: 54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 113
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I GKP RIM+S RDP++RK+G GNVFIKNLDT+IDNKAL DTFAAFG +LSCK
Sbjct: 114 EDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCK 173
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA D G SKGYGFV +E EAA NAIK +NGML+N+K+V+VG + +++R + +
Sbjct: 174 VAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKA 233
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFGFVNFQSPDAAAAA 263
FTNVYV NL V++E+ +++F +G ITSA + +D + GKSR FGF F ++AAAA
Sbjct: 234 NFTNVYVKNLDTEVSNEEFRELFEKYGEITSASISRDGETGKSRGFGFFYFLKHESAAAA 293
Query: 264 VEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIND 323
VE+LN + YVGRAQK+ ERE +LR + E R+ + K +G NLY+KNL D I+D
Sbjct: 294 VEELNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNLTDDIDD 353
Query: 324 EKLKELFSEFGTITSCKVMVD--------------------------------------- 344
EKL++LF FG ITS +VM D
Sbjct: 354 EKLRDLFISFGNITSARVMRDTAGDPGSESEKEKESANKENVKDEAKKESGEEDSADKSD 413
Query: 345 -------------QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEER 391
+ G SKG GF FS P+EA++A+ EMN +M+ KPLYVA+AQRK+ R
Sbjct: 414 KVEKSDSKNATEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKPLYVALAQRKDVR 473
Query: 392 KARLQAQF--------AQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQ 443
K++L+A Q+ A GMS P + P +YY G G +P
Sbjct: 474 KSQLEASIQARNTIRQQQVAAAAGMS------------QPFMQP-AVYYPPGQQGFIPAN 520
Query: 444 AA---GYGFQQQ---VFPGLRPGG 461
AA G F QQ V PG+ PGG
Sbjct: 521 AAQRGGMAFGQQPGMVIPGI-PGG 543
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 158/300 (52%), Gaps = 20/300 (6%)
Query: 108 PSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENE 166
PS + ++++ LD S+ L + F++ G V S +V D+ +S GY +V + N
Sbjct: 47 PSTTQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 106
Query: 167 EAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKI 226
+ A++ LN LI K + ++ +R ++ NV++ NL + ++ L
Sbjct: 107 ADGERALEDLNYTLIKGKPCRI-MWSQRDPALRKTGQ---GNVFIKNLDTAIDNKALHDT 162
Query: 227 FGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRA 286
F FG I S V +D G S+ +GFV++++ +AA A++ +NG N+K +VG +
Sbjct: 163 FAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKK 222
Query: 287 EREADLRAKFEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
+R+ S++E++K N+Y+KNLD +++E+ +ELF ++G ITS + D
Sbjct: 223 DRQ------------SKFEEMKANFTNVYVKNLDTEVSNEEFRELFEKYGEITSASISRD 270
Query: 345 -QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ G S+G GF F E A A+ E+N K + LYV AQ+K ER+ L+ Q R
Sbjct: 271 GETGKSRGFGFFYFLKHESAAAAVEELNDKEYKGQKLYVGRAQKKHEREEELRKQHEAAR 330
>gi|295674319|ref|XP_002797705.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280355|gb|EEH35921.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 822
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 236/518 (45%), Positives = 307/518 (59%), Gaps = 87/518 (16%)
Query: 14 TSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAY 73
++A T A P + SLYVG+L+ +V E+ L++LFS + QV S+RVCRD R SLGYAY
Sbjct: 43 SAAPTNAQPH---SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAY 99
Query: 74 VNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALC 133
VNY+N D A E LN+ I GKP RIM+S RDP++RK+G GNVFIKNLDT+IDNKAL
Sbjct: 100 VNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALH 159
Query: 134 DTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVR 193
DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+N+K+V+VG +
Sbjct: 160 DTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIA 219
Query: 194 RQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFG 250
+++R + + FTNVYV NL VT+E+ +++F +G ITSA + +D++ GKSR FG
Sbjct: 220 KKDRQSKFEEMKANFTNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFG 279
Query: 251 FVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGA 310
FVNF + D+AAAAVE LN + YVGRAQK+ ERE +LR + E R+ + K +G
Sbjct: 280 FVNFVNHDSAAAAVEDLNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGV 339
Query: 311 NLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHG----------------------- 347
NLY+KNL D I+DEKL++LF FG ITS +VM D G
Sbjct: 340 NLYVKNLTDDIDDEKLRDLFIGFGNITSARVMRDTIGDAGSESEKEKEASKDNKENVKEE 399
Query: 348 -----------------------------FSKGSGFA--AFSMPEEATRALNEMNGKMIG 376
K GF FS P+EA++A+ EMN +M+
Sbjct: 400 TKKEAGGEDSAEKTDKAEKPDTKKPTDKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVN 459
Query: 377 RKPLYVAVAQRKEERKARLQAQF--------AQIRAPGGMSPLASGIPGYHHGAPRLGPQ 428
KPLYVA+AQRK+ RK++L+A Q+ A GMS P + P
Sbjct: 460 GKPLYVALAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMS------------QPFMQP- 506
Query: 429 QLYYGQGTPGLMPPQA--AGYGFQQQ---VFPGLRPGG 461
+YY G G +P A G F QQ V PG+ PGG
Sbjct: 507 AVYYPPGQQGFIPANAQRGGMAFAQQPGMVLPGM-PGG 543
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 552 ALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVA 611
A ++A P + +MLGE +YP ++ +P A K+TGMLLEMD E+L L++ AL+ KV
Sbjct: 701 AFSAAPPAQQKQMLGEAIYPKIQVQQPELAGKITGMLLEMDNAELLSLVDDDAALRAKVD 760
Query: 612 EAMAVLQE 619
EA+ V E
Sbjct: 761 EAINVYDE 768
>gi|225678061|gb|EEH16345.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 755
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 236/518 (45%), Positives = 307/518 (59%), Gaps = 87/518 (16%)
Query: 14 TSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAY 73
++A T A P + SLYVG+L+ +V E+ L++LFS + QV S+RVCRD R SLGYAY
Sbjct: 43 SAAPTNAQPH---SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAY 99
Query: 74 VNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALC 133
VNY+N D A E LN+ I GKP RIM+S RDP++RK+G GNVFIKNLDT+IDNKAL
Sbjct: 100 VNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALH 159
Query: 134 DTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVR 193
DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+N+K+V+VG +
Sbjct: 160 DTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIA 219
Query: 194 RQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFG 250
+++R + + FTNVYV NL VT+E+ +++F +G ITSA + +D++ GKSR FG
Sbjct: 220 KKDRQSKFEEMKANFTNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFG 279
Query: 251 FVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGA 310
FVNF + D+AAAAVE LN + YVGRAQK+ ERE +LR + E R+ + K +G
Sbjct: 280 FVNFVNHDSAAAAVEDLNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGV 339
Query: 311 NLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHG----------------------- 347
NLY+KNL D I+DEKL++LF FG ITS +VM D G
Sbjct: 340 NLYVKNLTDDIDDEKLRDLFIGFGNITSARVMRDTIGDAGSESEKEKEASKDNKENVREE 399
Query: 348 -----------------------------FSKGSGFA--AFSMPEEATRALNEMNGKMIG 376
K GF FS P+EA++A+ EMN +M+
Sbjct: 400 TKKEAGGEDSAEKTDKAEKPDTKKPTDKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVN 459
Query: 377 RKPLYVAVAQRKEERKARLQAQF--------AQIRAPGGMSPLASGIPGYHHGAPRLGPQ 428
KPLYVA+AQRK+ RK++L+A Q+ A GMS P + P
Sbjct: 460 GKPLYVALAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMS------------QPFMQP- 506
Query: 429 QLYYGQGTPGLMPPQA--AGYGFQQQ---VFPGLRPGG 461
+YY G G +P A G F QQ V PG+ PGG
Sbjct: 507 AVYYPPGQQGFIPANAQRGGMAFAQQPGMVLPGM-PGG 543
>gi|327299218|ref|XP_003234302.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
gi|326463196|gb|EGD88649.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
Length = 781
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 284/744 (38%), Positives = 378/744 (50%), Gaps = 149/744 (20%)
Query: 3 ATGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRD 62
+T AA TA S T A S + SLYVG+L+ +V E+ LY+LFS + QV S+RVCRD
Sbjct: 33 STEAAPETAGEPSGTAAPATSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRD 92
Query: 63 QSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKN 122
R SLGYAYVNY+N D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKN
Sbjct: 93 AVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKN 152
Query: 123 LDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIN 182
LDT+IDNKAL DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+N
Sbjct: 153 LDTAIDNKALHDTFAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLN 212
Query: 183 DKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMK 240
+K+V+VG + +++R + + FTN+YV N+ + VTDE+ + +F +G ITSA + +
Sbjct: 213 EKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSR 272
Query: 241 DSD-GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQE 299
D++ GKSR FGFVNF +AA+AAVE LN + YVGRAQK+ ERE +LR ++E
Sbjct: 273 DNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAA 332
Query: 300 RI---SRY----------------EKLK------GANLYLKNLDDSIND-----EKLKEL 329
RI S+Y EKL+ G K + ++I D EK KE
Sbjct: 333 RIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGNITSAKVMREAIVDVPAETEKGKEA 392
Query: 330 FSEF-----------------------------GTITSCKVMVDQHGFSKGSGFAAFSMP 360
E G S K G SKG GF FS P
Sbjct: 393 DKEKAKEAGDKSEEKGESKSESEDKSKSEEKSEGKTESAKPEKRHLGKSKGFGFVCFSNP 452
Query: 361 EEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFA--------QIRAPGGMSPLA 412
+EA++A+ EMN +M+ KPLYVA+AQRK+ RK++L+A Q+ A GM+
Sbjct: 453 DEASKAVTEMNQRMVHGKPLYVALAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMA--- 509
Query: 413 SGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQ---VFPGLRPGGPNYIMPYH 469
P + P Y G G +P G F Q V PG+ PGG P
Sbjct: 510 ---------QPFMQPAVFYGAPGQQGFLPGAQRGMQFAGQAGMVMPGM-PGGRPGQFPQF 559
Query: 470 LQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSN---QGIRYLDNARNGTDQSVVSMVP--- 523
PGQ+ G R N +Q P F S G NG + S +S V
Sbjct: 560 ------PGQQGG--RGMNPNQPLPPNFAMGSQGIPMGAMQSAGIPNGLNYSQISQVQSFG 611
Query: 524 -------------------VPFEVSGMPATP----------------------------V 536
P ++ G P P
Sbjct: 612 RGGGRGQGPMQGMPPAAGNAP-QMRGGPGAPGFAQGRNMPIQQGGRAGPGGRGQGAPGQG 670
Query: 537 ETPRPVPVPISTLTSALASASPDDRTR-MLGEQLYPLVENIEPVHASKVTGMLLEMDQTE 595
PR ++ A+ +A+P+ + + MLGE +YP + +P A K+TGMLLEMD +E
Sbjct: 671 GIPRDEAAGSGSINLAVFNAAPEPQQKQMLGEAIYPKILAQQPELAGKITGMLLEMDNSE 730
Query: 596 VLHLIESPEALKTKVAEAMAVLQE 619
++ L++ AL+ KV EA+ V E
Sbjct: 731 LIGLVDDDVALRAKVDEALTVYDE 754
>gi|405973173|gb|EKC37903.1| Polyadenylate-binding protein 4 [Crassostrea gigas]
Length = 465
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/370 (56%), Positives = 268/370 (72%), Gaps = 5/370 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYV DL +V E L+ FS V+SVRVCRD R SLGYAYVN+ P DA A +
Sbjct: 11 SLYVRDLHPDVTEDMLFKKFSTAGPVLSVRVCRDMITRRSLGYAYVNFHQPADAERALDT 70
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I G+PIRI + RDPS+RKSG GNVFIK LD SIDNKAL DTF+AFG + SCK+
Sbjct: 71 MNFDIIKGRPIRITWYQRDPSLRKSGVGNVFIKKLDKSIDNKALYDTFSAFGNISSCKIV 130
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSPKF 206
D +G S+GYGFV FE +EAA+ AI+ +NGML+N K+V+VG F+ R+ER + KF
Sbjct: 131 CDEHG-SRGYGFVHFETDEAARIAIEKVNGMLLNGKKVFVGRFMSRRERLEVLDLGMRKF 189
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVM-KDSDGKSRCFGFVNFQSPDAAAAAVE 265
NVYV NL+E DE L++IF +G I SA VM DS KS+ FGFV+F++P+AA AVE
Sbjct: 190 NNVYVKNLSEETDDEKLREIFELYGKIISAKVMIDDSSRKSKQFGFVSFENPEAAKKAVE 249
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LNG N K+ YVGRAQ + ER+A+L+ KFE+ R R + +G NL++KNLDD+I+D++
Sbjct: 250 ALNGNDNAGKILYVGRAQTKIERQAELKEKFERIRKERINRYQGVNLFVKNLDDNIDDKR 309
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L++ F++FGTITS KVM ++G SKG GF FS PEEAT+A+ EMN K+I +PLYVA+A
Sbjct: 310 LRKEFAQFGTITSAKVMT-ENGRSKGFGFVYFSSPEEATKAIVEMNEKIIEARPLYVALA 368
Query: 386 QRKEERKARL 395
QRKE+RKA L
Sbjct: 369 QRKEDRKAYL 378
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 97/195 (49%), Gaps = 26/195 (13%)
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAA 260
VSP ++YV +L VT++ L K F G + S V +D +S + +VNF P A
Sbjct: 5 VSPAVASLYVRDLHPDVTEDMLFKKFSTAGPVLSVRVCRDMITRRSLGYAYVNFHQPADA 64
Query: 261 AAAVEKLNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
A++ +N + WY +R+ LR K N+++K
Sbjct: 65 ERALDTMNFDIIKGRPIRITWY--------QRDPSLR------------KSGVGNVFIKK 104
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
LD SI+++ L + FS FG I+SCK++ D+HG S+G GF F E A A+ ++NG ++
Sbjct: 105 LDKSIDNKALYDTFSAFGNISSCKIVCDEHG-SRGYGFVHFETDEAARIAIEKVNGMLLN 163
Query: 377 RKPLYVAVAQRKEER 391
K ++V + ER
Sbjct: 164 GKKVFVGRFMSRRER 178
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+L+V +L+ N+++ +L F+Q + S +V + + S G+ +V +S+P++A
Sbjct: 291 YQGVNLFVKNLDDNIDDKRLRKEFAQFGTITSAKVMTENGR--SKGFGFVYFSSPEEATK 348
Query: 85 AKEALNFMPINGKPIRIMYSHR 106
A +N I +P+ + + R
Sbjct: 349 AIVEMNEKIIEARPLYVALAQR 370
>gi|148223119|ref|NP_001088471.1| uncharacterized protein LOC495336 [Xenopus laevis]
gi|54311231|gb|AAH84798.1| LOC495336 protein [Xenopus laevis]
Length = 711
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/375 (51%), Positives = 260/375 (69%), Gaps = 1/375 (0%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL ++N+ QL FS++ V VCRD + R SLGY YVN+ +P+DA A E
Sbjct: 2 TSLYVGDLHPDINDDQLRMKFSEIGPVAVAHVCRDVTSRKSLGYGYVNFEDPKDAERALE 61
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
+N+ + G+PIRIM+S RDPS+RKSG GN+FIKNL +I+ K L DTF+ FG +LSCK+
Sbjct: 62 QMNYEVVMGRPIRIMWSQRDPSLRKSGLGNIFIKNLAKTIEQKELYDTFSLFGRILSCKI 121
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
A+D NG SKGYGFV FENEE A+ AI+ +N M I K VYVG F+ R +R QN KF
Sbjct: 122 AMDENGNSKGYGFVHFENEECAKRAIQKVNNMSICGKVVYVGNFIPRSDRKSQNRKQKFN 181
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
N+YV N DE LK++F FG I SA VMKDS+GKS+ FGFV + +P+ A AAV +
Sbjct: 182 NIYVKNFPPETDDEKLKEMFTEFGEIKSACVMKDSEGKSKGFGFVCYLNPEHAEAAVAAM 241
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK-LKGANLYLKNLDDSINDEKL 326
+G + Y RAQ++ ER+ +L+ + E+++ R K + NLY+KNLDD I+DE+L
Sbjct: 242 HGKEIGGRSLYASRAQRKEERQEELKLRLEKQKAERRSKYVSNVNLYVKNLDDEIDDERL 301
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
KE+FS++G I+S KVM D + SKG GF F+ PE+AT+A+ E NG++ KPLYVA+AQ
Sbjct: 302 KEIFSKYGPISSAKVMTDSNNRSKGFGFVCFTNPEQATKAVTEANGRVEYSKPLYVAIAQ 361
Query: 387 RKEERKARLQAQFAQ 401
RKE+R+A L A+ Q
Sbjct: 362 RKEDRRAELAAKHTQ 376
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%)
Query: 553 LASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAE 612
LA S DD+ R LGE+L+PL+ P A K+TGMLL +D EV+H++ES + L+ K+ E
Sbjct: 598 LARLSEDDQKRALGEKLFPLIREQYPQLAHKLTGMLLGLDIPEVIHMLESKDTLQEKLQE 657
Query: 613 AMAVLQEAAARSD 625
+ VL+ + SD
Sbjct: 658 GINVLRGNQSASD 670
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
NV+LYV +L+ +++ +L ++FS+ + S +V D + RS G+ +V ++NP+ A A
Sbjct: 284 NVNLYVKNLDDEIDDERLKEIFSKYGPISSAKVMTDSNNRSK-GFGFVCFTNPEQATKAV 342
Query: 87 EALNFMPINGKPIRIMYSHR 106
N KP+ + + R
Sbjct: 343 TEANGRVEYSKPLYVAIAQR 362
>gi|443895761|dbj|GAC73106.1| polyadenylate-binding protein [Pseudozyma antarctica T-34]
Length = 556
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/423 (48%), Positives = 282/423 (66%), Gaps = 12/423 (2%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVG+L+ +V E+ L+++F+ + V S+RVCRD R SLGYAYVN+ N D A E
Sbjct: 46 TSLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNFLNAADGERAME 105
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LN+ I +P RIM+S RDP++R++G GN+FIKNLD IDNKAL DTFAAFG +LSCKV
Sbjct: 106 QLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKV 165
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSPK 205
A +G S GYGFV +E EAA AIK +NGML+NDK+VYVG + R+ER + +
Sbjct: 166 ATSESG-SLGYGFVHYETAEAADAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEESRAR 224
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
FTNVY N+ VTDE+ +K+F +G ITS ++ +D DGKS+ FGFVNF++ D A AV+
Sbjct: 225 FTNVYCKNVDADVTDEEFEKLFTKYGKITSCVLQRDEDGKSKGFGFVNFENHDEAQTAVD 284
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
+L+ + + +V RAQK++ERE +LR +E + + K +G NLYLKN+ +S +DE+
Sbjct: 285 ELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDER 344
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L++ F+ FG ITSCK+M G S+G GF +S PEEA +A++EMNGKM+ +PLYVA+A
Sbjct: 345 LRDEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVALA 404
Query: 386 QRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAA 445
QRK+ R+ +L+AQ Q A+ GY GP +YY Q PG P Q
Sbjct: 405 QRKDVRRQQLEAQIMQRNQLRLQQQAAAQGMGYP------GP-GMYYPQ--PGAFPGQPG 455
Query: 446 GYG 448
G G
Sbjct: 456 GMG 458
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 153/292 (52%), Gaps = 22/292 (7%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GN+ ++ +L+ ++ L+D F+ ++S +V +S SLGY +V+Y + A
Sbjct: 131 TGQGNI--FIKNLDAGIDNKALHDTFAAFGNILSCKVATSES--GSLGYGFVHYETAEAA 186
Query: 83 ANAKEALNFMPINGKPIRIMY----SHRDPSIRKS--GYGNVFIKNLDTSIDNKALCDTF 136
A + +N M +N K + + + R I +S + NV+ KN+D + ++ F
Sbjct: 187 DAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEESRARFTNVYCKNVDADVTDEEFEKLF 246
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
+G + SC + D +G+SKG+GFV FEN + AQ A+ L+ ++++V ++ E
Sbjct: 247 TKYGKITSCVLQRDEDGKSKGFGFVNFENHDEAQTAVDELHDSDFKGQKLFVARAQKKSE 306
Query: 197 R----------AQQNVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG 244
R A+ KF N+Y+ N+ E+ DE L+ F FG ITS +M+ G
Sbjct: 307 REEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDERLRDEFAPFGAITSCKIMRAPSG 366
Query: 245 KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKF 296
SR FGFV + +P+ A AV ++NG +++ YV AQ++ R L A+
Sbjct: 367 VSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVALAQRKDVRRQQLEAQI 418
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 47/63 (74%)
Query: 557 SPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAV 616
SPD++ +MLGE +YP V +P A K+TGM+LE+ TE+LHL+E EAL KV+EA+ V
Sbjct: 474 SPDEQKQMLGEAIYPKVAASQPELAGKLTGMILELPVTELLHLLEESEALDAKVSEALEV 533
Query: 617 LQE 619
L+E
Sbjct: 534 LKE 536
>gi|428183055|gb|EKX51914.1| hypothetical protein GUITHDRAFT_84932 [Guillardia theta CCMP2712]
Length = 616
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/376 (51%), Positives = 259/376 (68%), Gaps = 4/376 (1%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVGDL+ NV E QL+++FS V V S+RVCRD R SLGYAYVN+ N DA A
Sbjct: 23 SASLYVGDLDPNVTEPQLFEVFSVVGPVASIRVCRDAMTRRSLGYAYVNFHNVVDAERAL 82
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
+ LN+ I GK RIM+ HRDPSIRKSG GN+FIKNLD ++D + L DTF+ FG +LSCK
Sbjct: 83 DTLNYTQIKGKACRIMWKHRDPSIRKSGAGNIFIKNLDKTVDTRTLHDTFSQFGNILSCK 142
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF 206
V++D + S+G+GFVQFE E A AI +NGML+ DK+++VG F+ R ER N +F
Sbjct: 143 VSMDEHANSRGFGFVQFETAEEANEAISKVNGMLLEDKRLFVGPFIPRGERESTNGERRF 202
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV N + V+D+D +K F +G ITS +M+ DG S+CFGFVNF+ D A E+
Sbjct: 203 TNVYVKNFPDNVSDDDFRKSFERYGEITSCKIMRKEDGTSKCFGFVNFKEADDAKKCCEE 262
Query: 267 LNGTT--NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
+NG ++ Y GRA+K +ER+ L+ K++Q R+ R + + NLY+KNLDD+I+DE
Sbjct: 263 MNGQKPFGGERDIYAGRAEKESERKEKLKKKYDQIRMERLKNNQLVNLYIKNLDDTIDDE 322
Query: 325 KLKELFSEFGTITSCKVMVDQH--GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
KL++ F +FGTITS KVM D+ SKG GF F+ PEEATRA+ MNG+M+G KP+YV
Sbjct: 323 KLRQTFEQFGTITSAKVMRDKDRPEVSKGFGFVCFAQPEEATRAVTAMNGQMVGTKPIYV 382
Query: 383 AVAQRKEERKARLQAQ 398
A+ Q E R+ AQ
Sbjct: 383 ALHQPIEIRRQMQAAQ 398
>gi|302920668|ref|XP_003053121.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
gi|256734061|gb|EEU47408.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
Length = 742
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 230/520 (44%), Positives = 315/520 (60%), Gaps = 68/520 (13%)
Query: 18 TAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYS 77
++A P + SLYVG+L+ V E+ L++LFSQ+ V S+RVCRD R SLGYAYVNY+
Sbjct: 50 SSAAPHPQNSASLYVGELDPAVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYN 109
Query: 78 NPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFA 137
+ D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLD +IDNKAL DTFA
Sbjct: 110 STADGEKALEELNYTIIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFA 169
Query: 138 AFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
AFG +LSCKVA D NG SKGYGFV +E +EAA AIK +NGML+N+K+VYVG + +++R
Sbjct: 170 AFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKKDR 229
Query: 198 AQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQ 255
+ + FTNVYV N++ T++D +++F +G +TS+ + +D +GKSR FGFVNF
Sbjct: 230 QSKFEEMKANFTNVYVKNISPEATEDDFRQLFEQYGDVTSSSLARDQEGKSRGFGFVNFT 289
Query: 256 SPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLK 315
+ ++AA AV++LNG + YVGRAQK+ ERE +LR +E R+ + K +G NLY+K
Sbjct: 290 THESAAKAVDELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIK 349
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVDQH----------------------------- 346
NLDD ++D+KL+++FSEFG ITS KVM D
Sbjct: 350 NLDDDVDDDKLRQMFSEFGPITSAKVMRDTPVENEDEKPAEEKKEEQEDKDKENKPEETK 409
Query: 347 ------------------GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRK 388
G SKG GF FS P++AT+A+ EMN +M+ KPLYVA+AQRK
Sbjct: 410 EGEEGAEKKAEKKSDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMVSNKPLYVALAQRK 469
Query: 389 EERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQG-TPGLMPPQA 444
+ RK++L+A Q+R + A+G+P + P +Y+ G PG +P
Sbjct: 470 DVRKSQLEASIQARNQLRM--QQAAAAAGMPQQYMQPP------VYFAPGQQPGFIPQGG 521
Query: 445 AGYGFQQ--QVFPGLRPGGPNYIMPYHLQRQVHPGQRTGV 482
G F Q PG++ G P Y Q G R GV
Sbjct: 522 RGMPFPQPGMGMPGVQGGRPGQFPGYPQQ-----GGRGGV 556
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%)
Query: 545 PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPE 604
P S L L +A P + ++LGE ++P ++ I A K+TGMLLEMD +E+++LIE
Sbjct: 661 PASVLQQQLQAAQPAQQKQILGELIFPKIQAINSELAGKITGMLLEMDNSELVNLIEDDS 720
Query: 605 ALKTKVAEAMAVLQE 619
+LK KV EA+AV E
Sbjct: 721 SLKAKVDEALAVYDE 735
>gi|254578926|ref|XP_002495449.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
gi|238938339|emb|CAR26516.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
Length = 587
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/394 (49%), Positives = 274/394 (69%), Gaps = 3/394 (0%)
Query: 8 AATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRS 67
A A TS + + SLYVG+L+ V+E+ LYD+FS + V S+RVCRD ++
Sbjct: 20 APQTAPTSTDSDSQKVETSTASLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAITKT 79
Query: 68 SLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSI 127
SLGYAYVN+++ + A E LN+ PI G+P RIM+S RDPS+RK G GN+FIKNL I
Sbjct: 80 SLGYAYVNFNDYEAGRQAIEKLNYTPIKGQPCRIMWSQRDPSLRKKGSGNIFIKNLHADI 139
Query: 128 DNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQV 186
DNKAL DTF+ FG +LSCK+A D G SKG+GFV FE++EAA+ AI +NGML+N ++V
Sbjct: 140 DNKALHDTFSVFGNILSCKIATDEVTGNSKGFGFVHFESDEAAREAIDAINGMLLNGQEV 199
Query: 187 YVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG 244
YV V R++R + FTNVY+ N++ +++ ++ F +TS + KDS+G
Sbjct: 200 YVAPHVSRKDRQSKLEEAKANFTNVYIKNISLETPEQEFEEFFKKVAPVTSVHLEKDSEG 259
Query: 245 KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRY 304
K R FGFVN+++ AA AVE+LNG + + +VGRAQK+ ER+ +LR ++EQ ++ +
Sbjct: 260 KLRGFGFVNYETHAGAAKAVEELNGVEFHGQQLHVGRAQKKYERQQELRRQYEQSKLEKM 319
Query: 305 EKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEAT 364
EK +G NL++KNLDDSI+DE+L+E FS FGTITS KVM ++G SKG GF FS PEEAT
Sbjct: 320 EKYQGVNLFIKNLDDSIDDERLREEFSPFGTITSVKVMTTENGKSKGFGFVCFSTPEEAT 379
Query: 365 RALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQ 398
+A+ E N +++ KPLYVA+AQRK+ R+++L Q
Sbjct: 380 KAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQ 413
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 563 RMLGEQLYPLV--ENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
++LGEQLY V + A K+TGM+L++ EV+ L+ES E + EA A +
Sbjct: 516 QLLGEQLYKKVFARTSDEEAAGKITGMILDLPSQEVVPLLESDELFEQHFKEAFAAYE 573
>gi|156086682|ref|XP_001610750.1| polyadenylate binding protein [Babesia bovis T2Bo]
gi|154798003|gb|EDO07182.1| polyadenylate binding protein, putative [Babesia bovis]
Length = 585
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 255/612 (41%), Positives = 358/612 (58%), Gaps = 70/612 (11%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S + + SLYVG+L V E+ LY++F+ + V S+RVCRD R SLGYAYVNY N QDA
Sbjct: 31 SSFNSASLYVGNLLPEVTEAMLYEVFNGIGPVASIRVCRDSLTRKSLGYAYVNYYNFQDA 90
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A E LN++ I G+P RIM+S RDPS+RKSG GN+F+KNLD +ID KAL DTF+ FGT+
Sbjct: 91 EAALECLNYIEIKGQPARIMWSERDPSLRKSGTGNIFVKNLDKAIDTKALYDTFSHFGTI 150
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNV 202
LSCKVAIDS G SKGYGFV + EE+A+ AI+ +NGMLI + QV V F+RR ER V
Sbjct: 151 LSCKVAIDSLGNSKGYGFVHYTTEESAKEAIEKVNGMLIGNSQVSVAPFLRRNERT-STV 209
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
FTN+YV N +T T++DL + F +G ITS ++ SD K R F FVNF + A A
Sbjct: 210 GDVFTNLYVRNFPDTWTEDDLHQTFSKYGEITSLLL--KSDDKGRRFAFVNFVDTNMAKA 267
Query: 263 AVEKLNGTT--NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
A+E NG + ++ V + +A R A L+A+++ + K G NLY+KNLDD
Sbjct: 268 AMEGENGVKFESVEEPMMVCQHMDKARRYAMLKAQYDSNAQDQRNKFMGVNLYIKNLDDD 327
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
+D+ L++LF ++GT+TS KVM D +G S+G GF FS P+EAT+A+ M+ K++ KPL
Sbjct: 328 FDDDGLRDLFKQYGTVTSSKVMRDHNGVSRGFGFVCFSRPDEATKAVAGMHLKLVKNKPL 387
Query: 381 YVAVAQRKEERKARLQAQ-----FAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQ- 434
YV +A+++E+R +R+Q + Q G PL P + PQ + Q
Sbjct: 388 YVGLAEKREQRASRMQQRNRQNDMMQYGDRPGYVPLYP---------PEMVPQGYFNHQV 438
Query: 435 GTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHP-----GQRTGVRRSGNTH 489
G +P Q G G + G+R P +M H + P G+RT V+
Sbjct: 439 GFRPTVPAQPMGVGPR-----GMRMVAPMPMM--HGRGTASPHAAAQGRRTPVK------ 485
Query: 490 QMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTL 549
Q P G ++ ARN T+ +P +G PA V T RP+
Sbjct: 486 --QVPL------SGFKFTAQARNRTE------LP-----NGAPAAAVPTQRPID------ 520
Query: 550 TSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTK 609
+A+ +M+GE+L+P+V P A K+TGM+LEMD E++ L+E+ + LK K
Sbjct: 521 GAAM-------HKQMIGERLFPIVARENPELAGKITGMMLEMDNQELMALLENEQQLKDK 573
Query: 610 VAEAMAVLQEAA 621
+ EAM VL++A+
Sbjct: 574 IQEAMRVLKQAS 585
>gi|297827151|ref|XP_002881458.1| PAB7 binding protein 7 [Arabidopsis lyrata subsp. lyrata]
gi|297327297|gb|EFH57717.1| PAB7 binding protein 7 [Arabidopsis lyrata subsp. lyrata]
Length = 609
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 243/607 (40%), Positives = 341/607 (56%), Gaps = 62/607 (10%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V E LYD F++ + SVR+C+D S SL Y Y N+ + QDA A E
Sbjct: 25 SLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASTGRSLCYGYANFLSRQDANLAIEK 84
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
N +NGK IR+M+S R+P R++G GNVF+KNL SI N L D F FG ++SCKVA
Sbjct: 85 KNHSLLNGKMIRVMWSVREPDARRNGVGNVFVKNLPESITNAVLQDMFKKFGNIVSCKVA 144
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
+G+S+GYGFVQFE E+AA AI+ LN + K++YVG F+++ +RA+ K+TN
Sbjct: 145 TFEDGKSRGYGFVQFEQEDAAHAAIEKLNSTTVAGKEIYVGKFMKKTDRAK--AEEKYTN 202
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
VY+ NL V ++ L++ F FG I S + KD +G + + FVNF P+ A A E +N
Sbjct: 203 VYMKNLDADVNEDLLREKFSEFGKIVSLAIAKDENGLCKGYAFVNFDKPEDARWAAETMN 262
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
GT K YVGRAQK+AERE LR +F+++ + K K +N+Y+KN++ + +E+L++
Sbjct: 263 GTRFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQMMKAKVSNIYVKNINVGVTEEELRK 322
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRK 388
FS+ GTITS K+M D+ G SKG GF FS PEEA A+ +GKM KPLYVA AQ+K
Sbjct: 323 HFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKTFHGKMFHGKPLYVATAQKK 382
Query: 389 EERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLM----PPQA 444
E+RK +LQ QF GG S AS IPG + AP LYY PG++ PP
Sbjct: 383 EDRKMQLQVQFGNCVEGGGSSSSASFIPGTY--AP------LYYTNTHPGMVYQSYPPTW 434
Query: 445 AGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGI 504
+P N+ + P + N+ + I
Sbjct: 435 KSANMISSSYP-------------------------------NSQALTYPSVVGNAPRKI 463
Query: 505 RYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETP-----------RPVPVPISTLTSAL 553
+ N + D++ VS VP ++ + M + + + PI S
Sbjct: 464 K--QNRKGKLDRNAVSYVPNVYQSTQMLPLSRDFSNQQLNRTYGRGKEMKKPIQQRQSET 521
Query: 554 ASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEA 613
++LGE LYPLVE +EP A+K+TGMLLEMD++E+L L++SP+ L +V EA
Sbjct: 522 IVMEK----QLLGELLYPLVEKLEPQLANKITGMLLEMDKSELLLLLKSPQELAVRVEEA 577
Query: 614 MAVLQEA 620
VL+ A
Sbjct: 578 FEVLKSA 584
>gi|256271306|gb|EEU06376.1| Pab1p [Saccharomyces cerevisiae JAY291]
Length = 577
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/390 (50%), Positives = 271/390 (69%), Gaps = 4/390 (1%)
Query: 12 AVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGY 71
A T + + +V + + SLYVGDLE +V+E+ LYD+FS + V S+RVCRD ++SLGY
Sbjct: 24 AATGSESQSVENS--SASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGY 81
Query: 72 AYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
AYVN+++ + A E LN+ PI G+ RIM+S RDPS+RK G GN+FIKNL IDNKA
Sbjct: 82 AYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKA 141
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L DTF+ FG +LS K+A D NG+SKG+GFV FE E AA+ AI LNGML+N +++YV
Sbjct: 142 LYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPH 201
Query: 192 VRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCF 249
+ R+ER Q +TN+YV N+ TDE +++F FG I SA + KD+DGK + F
Sbjct: 202 LSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGF 261
Query: 250 GFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKG 309
GFVN++ + A AVE LN + N + YVGRAQK+ ER L+ ++E R+ + K +G
Sbjct: 262 GFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQG 321
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNE 369
NL++KNLDDS++DEKL+E F+ +GTITS KVM ++G SKG GF FS PEEAT+A+ E
Sbjct: 322 VNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITE 381
Query: 370 MNGKMIGRKPLYVAVAQRKEERKARLQAQF 399
N +++ KPLYVA+AQRK+ R+++L Q
Sbjct: 382 KNQQIVAGKPLYVAIAQRKDVRRSQLAQQI 411
>gi|349577826|dbj|GAA22994.1| K7_Pab1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 577
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/390 (50%), Positives = 271/390 (69%), Gaps = 4/390 (1%)
Query: 12 AVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGY 71
A T + + +V + + SLYVGDLE +V+E+ LYD+FS + V S+RVCRD ++SLGY
Sbjct: 24 AATGSESQSVENS--SASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGY 81
Query: 72 AYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
AYVN+++ + A E LN+ PI G+ RIM+S RDPS+RK G GN+FIKNL IDNKA
Sbjct: 82 AYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKA 141
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L DTF+ FG +LS K+A D NG+SKG+GFV FE E AA+ AI LNGML+N +++YV
Sbjct: 142 LYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPH 201
Query: 192 VRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCF 249
+ R+ER Q +TN+YV N+ TDE +++F FG I SA + KD+DGK + F
Sbjct: 202 LSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGF 261
Query: 250 GFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKG 309
GFVN++ + A AVE LN + N + YVGRAQK+ ER L+ ++E R+ + K +G
Sbjct: 262 GFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQG 321
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNE 369
NL++KNLDDS++DEKL+E F+ +GTITS KVM ++G SKG GF FS PEEAT+A+ E
Sbjct: 322 VNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITE 381
Query: 370 MNGKMIGRKPLYVAVAQRKEERKARLQAQF 399
N +++ KPLYVA+AQRK+ R+++L Q
Sbjct: 382 KNQQIVAGKPLYVAIAQRKDVRRSQLAQQI 411
>gi|172092|gb|AAA34838.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
Length = 577
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/390 (50%), Positives = 271/390 (69%), Gaps = 4/390 (1%)
Query: 12 AVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGY 71
A T + + +V + + SLYVGDLE +V+E+ LYD+FS + V S+RVCRD ++SLGY
Sbjct: 24 AATGSESQSVENS--SASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGY 81
Query: 72 AYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
AYVN+++ + A E LN+ PI G+ RIM+S RDPS+RK G GN+FIKNL IDNKA
Sbjct: 82 AYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKA 141
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L DTF+ FG +LS K+A D NG+SKG+GFV FE E AA+ AI LNGML+N +++YV
Sbjct: 142 LYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPH 201
Query: 192 VRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCF 249
+ R+ER Q +TN+YV N+ TDE +++F FG I SA + KD+DGK + F
Sbjct: 202 LSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGF 261
Query: 250 GFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKG 309
GFVN++ + A AVE LN + N + YVGRAQK+ ER L+ ++E R+ + K +G
Sbjct: 262 GFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQG 321
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNE 369
NL++KNLDDS++DEKL+E F+ +GTITS KVM ++G SKG GF FS PEEAT+A+ E
Sbjct: 322 VNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITE 381
Query: 370 MNGKMIGRKPLYVAVAQRKEERKARLQAQF 399
N +++ KPLYVA+AQRK+ R+++L Q
Sbjct: 382 KNQQIVAGKPLYVAIAQRKDVRRSQLAQQI 411
>gi|6321013|ref|NP_011092.1| Pab1p [Saccharomyces cerevisiae S288c]
gi|417441|sp|P04147.4|PABP_YEAST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=ARS consensus-binding protein ACBP-67;
AltName: Full=Polyadenylate tail-binding protein
gi|171967|gb|AAA34787.1| poly (A)-binding protein [Saccharomyces cerevisiae]
gi|218386|dbj|BAA00017.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|603406|gb|AAB64692.1| Pab1p: polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|51013159|gb|AAT92873.1| YER165W [Saccharomyces cerevisiae]
gi|151944882|gb|EDN63141.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345803|gb|EDZ72507.1| YER165Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146093|emb|CAY79353.1| Pab1p [Saccharomyces cerevisiae EC1118]
gi|285811799|tpg|DAA07827.1| TPA: Pab1p [Saccharomyces cerevisiae S288c]
gi|365765943|gb|EHN07446.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299869|gb|EIW10961.1| Pab1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 577
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/390 (50%), Positives = 271/390 (69%), Gaps = 4/390 (1%)
Query: 12 AVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGY 71
A T + + +V + + SLYVGDLE +V+E+ LYD+FS + V S+RVCRD ++SLGY
Sbjct: 24 AATGSESQSVENS--SASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGY 81
Query: 72 AYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
AYVN+++ + A E LN+ PI G+ RIM+S RDPS+RK G GN+FIKNL IDNKA
Sbjct: 82 AYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKA 141
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L DTF+ FG +LS K+A D NG+SKG+GFV FE E AA+ AI LNGML+N +++YV
Sbjct: 142 LYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPH 201
Query: 192 VRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCF 249
+ R+ER Q +TN+YV N+ TDE +++F FG I SA + KD+DGK + F
Sbjct: 202 LSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGF 261
Query: 250 GFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKG 309
GFVN++ + A AVE LN + N + YVGRAQK+ ER L+ ++E R+ + K +G
Sbjct: 262 GFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQG 321
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNE 369
NL++KNLDDS++DEKL+E F+ +GTITS KVM ++G SKG GF FS PEEAT+A+ E
Sbjct: 322 VNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITE 381
Query: 370 MNGKMIGRKPLYVAVAQRKEERKARLQAQF 399
N +++ KPLYVA+AQRK+ R+++L Q
Sbjct: 382 KNQQIVAGKPLYVAIAQRKDVRRSQLAQQI 411
>gi|366987097|ref|XP_003673315.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
gi|342299178|emb|CCC66926.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
Length = 575
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/452 (46%), Positives = 293/452 (64%), Gaps = 25/452 (5%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVG+L+ V+E+ LYD+FS + V S+RVCRD ++SLGYAYVN+++ + A E
Sbjct: 36 SLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAVTKTSLGYAYVNFNDHEAGKKAIEQ 95
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LN+ PI G+ RIM+S RDP++RK G GN+FIKNL IDNKAL +TF+ FG +LS K+A
Sbjct: 96 LNYTPIKGRLCRIMWSQRDPALRKKGSGNIFIKNLHPDIDNKALFETFSVFGNILSSKIA 155
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D G+SKG+GFV FE+E +A+ AI LNGML+N +++YV + R+ER Q F
Sbjct: 156 TDETGKSKGFGFVHFEHESSAKEAIDALNGMLLNGQEIYVAPHLTRKERDSQLEETKAHF 215
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV N+ TDE+ ++F +G + S+ + K DGK + FGFV+F+ + AA AVE+
Sbjct: 216 TNVYVKNINLETTDEEFNELFAKYGNVLSSSLEKTEDGKLKGFGFVDFEKHEDAAKAVEE 275
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
LNGT D+ +V RAQK+ ER +L+ ++E R+ + K +G NL++KNLDDSI+DEKL
Sbjct: 276 LNGTEFKDQTLFVSRAQKKYERMQELKKQYEASRLEKMAKYQGVNLFVKNLDDSIDDEKL 335
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
KE F+ +GTITS +VM +G SKG GF FS PEEAT+A+ E N +++ KPLYVA+AQ
Sbjct: 336 KEEFAPYGTITSVRVMRTDNGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 395
Query: 387 RKEERKARLQAQF---AQIR---APGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLM 440
RK+ R+++L Q Q+R A + A+GIPG + P Y G+M
Sbjct: 396 RKDVRRSQLAQQIQARTQMRYQQATAAAAAAAAGIPG------QFMPPMFY------GVM 443
Query: 441 PPQAAGY-GFQQQVFPGLRP----GGPNYIMP 467
PP+ + G Q G+ P GP Y MP
Sbjct: 444 PPRGVPFNGPNPQQMNGVPPQQFRNGPGYGMP 475
>gi|406867457|gb|EKD20495.1| 4 family polyadenylate binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 785
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/524 (44%), Positives = 313/524 (59%), Gaps = 71/524 (13%)
Query: 2 EATGAAAATAAVTSAT----------TAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQV 51
+A GA A AV + + ++A P + SLYVG+L+ +V E+ L++LFSQ+
Sbjct: 26 DANGAPAINTAVPATSEDPDTAGPTPSSAAPHPQASASLYVGELDSSVTEAMLFELFSQI 85
Query: 52 AQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIR 111
V S+RVCRD R SLGYAYVNY+ D A E LN+ I G+P RIM+S RDP++R
Sbjct: 86 GSVASIRVCRDAVTRRSLGYAYVNYNTTIDGEKALEELNYTLIKGRPCRIMWSQRDPALR 145
Query: 112 KSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQN 171
K+G GNVFIKNLDT+IDNKAL DTFAAFG +LSCKVA D G SKGYGFV +E +EAA
Sbjct: 146 KTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDETGASKGYGFVHYETDEAASQ 205
Query: 172 AIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGH 229
AIK +NGML+N+K+V+VG + +++R + + FTN+YV N+ TDE+ +++F
Sbjct: 206 AIKHVNGMLLNEKKVFVGHHIPKKDRQSKFEEMKANFTNIYVKNIPVEATDEEFRELFEK 265
Query: 230 FGTITSAIVMKDSDG-KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAER 288
FG +TSA + +D+D KSR FGFVNF + + AA AV++LNG + YVGRAQK+ ER
Sbjct: 266 FGDVTSASLARDTDSNKSRGFGFVNFINHEHAAKAVDELNGKDFKGQDLYVGRAQKKHER 325
Query: 289 EADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH-- 346
E +LR +E RI + K +G NLY+KNLDD ++D+KL+ELF+ FG+ITS KVM D
Sbjct: 326 EEELRKSYEAARIEKASKYQGVNLYVKNLDDDVDDDKLRELFTPFGSITSAKVMRDTPAE 385
Query: 347 -----------------------------------------GFSKGSGFAAFSMPEEATR 365
G SKG GF F+ PEEA++
Sbjct: 386 TAEAEEKEKKDSEKNKENIKEGETAEAENTEDKPKSEKRTVGKSKGFGFVCFNNPEEASK 445
Query: 366 ALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGA 422
A+ +MN +M+ KPLYVA+AQRK+ RK +L+A QIR + A+G+P
Sbjct: 446 AVTDMNQRMVNNKPLYVALAQRKDVRKNQLEASIQARNQIRM--QQAAAAAGMPQQFMQT 503
Query: 423 PRLGPQQLYYGQG-TPGLMPPQAAGYGFQQQV---FPGLRPGGP 462
P ++Y G PG +P G F Q PG + G P
Sbjct: 504 P------MFYPPGQQPGFIPQAGRGMAFPPQAGMPIPGAQGGRP 541
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%)
Query: 549 LTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
L L++ P + ++LGE L+P ++ ++P A K+TGMLLEM+ E+++LIE AL++
Sbjct: 690 LAQQLSAVPPAQQKQLLGEALFPKIQVLQPELAGKITGMLLEMENQELVNLIEDDSALRS 749
Query: 609 KVAEAMAVLQE 619
KV EA+ V E
Sbjct: 750 KVDEALTVYDE 760
>gi|23197794|gb|AAN15424.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis
thaliana]
Length = 379
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/376 (58%), Positives = 270/376 (71%), Gaps = 18/376 (4%)
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
AAAVEK+NG + D V YVGRAQK++ERE +LR KFEQERI+R+EK +GANLYLKNLDDS
Sbjct: 2 AAAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDS 61
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
++DEKLKE+FSE+G +TS KVM++ G S+G GF A+S PEEA RAL+EMNGKMIGRKPL
Sbjct: 62 VDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPL 121
Query: 381 YVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHH---GAPRLGPQQLYYGQGTP 437
Y+A+AQRKE+R+A LQA F+QIRAPG MS G+HH G PQ +Y GQ
Sbjct: 122 YIALAQRKEDRRAHLQALFSQIRAPGPMS-------GFHHPPGGPMPGPPQHMYVGQNGA 174
Query: 438 GLMPPQAAGYGFQQQVFPGLRPG-GP-NYIMPYHLQRQVHPGQRTGVRRSGNT---HQMQ 492
++P Q GYGFQ Q PG+RPG GP N+I+PY LQRQ G R G RR H Q
Sbjct: 175 SMVPSQPIGYGFQPQFMPGMRPGSGPGNFIVPYPLQRQPQTGPRMGFRRGATNVQQHIQQ 234
Query: 493 QPQFMRNSNQGIRYLD---NARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTL 549
Q RN + G+RY++ N RNG D SV + P + A+ + + +PIS L
Sbjct: 235 QQLMHRNPSPGMRYMNGASNGRNGMDSSVPQGILPPIIPLPIDASSISHQKAPLLPISKL 294
Query: 550 TSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTK 609
TS+LASASP DRTRMLGEQLYPLVE EP+H +KVTGMLLEMDQ E+LHL+ESPEALK+K
Sbjct: 295 TSSLASASPADRTRMLGEQLYPLVERHEPLHVAKVTGMLLEMDQAEILHLMESPEALKSK 354
Query: 610 VAEAMAVLQEAAARSD 625
V+EA+ VL+ + +D
Sbjct: 355 VSEALDVLRLSVDPTD 370
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 81/142 (57%), Gaps = 14/142 (9%)
Query: 172 AIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF-------------TNVYVNNLAETV 218
A++ +NG+ + D +YVG ++ ER ++ + KF N+Y+ NL ++V
Sbjct: 4 AVEKMNGISLGDDVLYVGRAQKKSER-EEELRRKFEQERINRFEKSQGANLYLKNLDDSV 62
Query: 219 TDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWY 278
DE LK++F +G +TS+ VM + G SR FGFV + +P+ A A+ ++NG K Y
Sbjct: 63 DDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLY 122
Query: 279 VGRAQKRAEREADLRAKFEQER 300
+ AQ++ +R A L+A F Q R
Sbjct: 123 IALAQRKEDRRAHLQALFSQIR 144
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 56/86 (65%)
Query: 112 KSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQN 171
KS N+++KNLD S+D++ L + F+ +G V S KV ++ G S+G+GFV + N E A
Sbjct: 47 KSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALR 106
Query: 172 AIKMLNGMLINDKQVYVGLFVRRQER 197
A+ +NG +I K +Y+ L R+++R
Sbjct: 107 ALSEMNGKMIGRKPLYIALAQRKEDR 132
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
+LY+ +L+ +V++ +L ++FS+ V S +V + S G+ +V YSNP++A A
Sbjct: 52 NLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSR-GFGFVAYSNPEEALRALSE 110
Query: 89 LNFMPINGKPIRIMYSHR 106
+N I KP+ I + R
Sbjct: 111 MNGKMIGRKPLYIALAQR 128
>gi|255718749|ref|XP_002555655.1| KLTH0G14344p [Lachancea thermotolerans]
gi|238937039|emb|CAR25218.1| KLTH0G14344p [Lachancea thermotolerans CBS 6340]
Length = 587
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/462 (48%), Positives = 297/462 (64%), Gaps = 38/462 (8%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
LYVG+L+ +V E+ LYDLFS + V S+RVCRD ++SLGYAYVN+ + A E L
Sbjct: 42 LYVGELDPSVTEALLYDLFSPIGSVSSIRVCRDAITKTSLGYAYVNFHDHNAGRTAIEKL 101
Query: 90 NFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAI 149
N+ PI G+P RIM+S RDPS+RK G GNVFIKNL +IDNKAL DTF+ FG +LSCK+A
Sbjct: 102 NYTPIKGRPCRIMWSQRDPSLRKKGSGNVFIKNLHPAIDNKALHDTFSVFGNILSCKIAT 161
Query: 150 DSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFT 207
D G+S+ +GFV FE EEAA+ AI +NGML+N +VYV V +++R + V FT
Sbjct: 162 DETGKSRKFGFVHFEEEEAAKEAIDAINGMLLNGLEVYVAPHVSKKDRQSKLDEVKSNFT 221
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NVYV N+ T E+ +K+F ++G ITSA++ +D++GK R FGFVNF+ +AA A E+L
Sbjct: 222 NVYVKNIDSETTQEEFEKMFSNYGAITSAVLERDNEGKLRGFGFVNFEDHNAALKACEEL 281
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
N T + YVGRAQK+ ER +L+ ++E R+ + K +G NL++KNLDDS++D+KL+
Sbjct: 282 NDTDFKGQKLYVGRAQKKYERLQELKKQYESSRMEKLAKYQGVNLFVKNLDDSVDDQKLE 341
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
E F+ FGTITS KVM D+ G SKG GF FS PEEAT+A+ E N +++ KPLYVA+AQR
Sbjct: 342 EEFAPFGTITSVKVMRDEAGNSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQR 401
Query: 388 KEERKARLQAQFA---QIR-------------APGG-MSPLASGI--PGYHHGAPRLG-- 426
KE R+++L Q Q+R PG M P+ G+ P G P G
Sbjct: 402 KEVRRSQLAQQIQARNQMRYQQATAAAAAAAGMPGQFMQPMFYGVMPP---RGVPFNGPN 458
Query: 427 PQQLYYGQGTP-GLMPPQAAGYGFQQQVFPGLRPGGPNYIMP 467
PQQ+ G P +PPQ G RP GP Y +P
Sbjct: 459 PQQMAAMNGIPKNGVPPQQFG-----------RPAGPMYGVP 489
>gi|323355343|gb|EGA87168.1| Pab1p [Saccharomyces cerevisiae VL3]
Length = 563
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/390 (50%), Positives = 271/390 (69%), Gaps = 4/390 (1%)
Query: 12 AVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGY 71
A T + + +V + + SLYVGDLE +V+E+ LYD+FS + V S+RVCRD ++SLGY
Sbjct: 24 AATGSESQSVENS--SASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGY 81
Query: 72 AYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
AYVN+++ + A E LN+ PI G+ RIM+S RDPS+RK G GN+FIKNL IDNKA
Sbjct: 82 AYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKA 141
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L DTF+ FG +LS K+A D NG+SKG+GFV FE E AA+ AI LNGML+N +++YV
Sbjct: 142 LYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPH 201
Query: 192 VRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCF 249
+ R+ER Q +TN+YV N+ TDE +++F FG I SA + KD+DGK + F
Sbjct: 202 LSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGF 261
Query: 250 GFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKG 309
GFVN++ + A AVE LN + N + YVGRAQK+ ER L+ ++E R+ + K +G
Sbjct: 262 GFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQG 321
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNE 369
NL++KNLDDS++DEKL+E F+ +GTITS KVM ++G SKG GF FS PEEAT+A+ E
Sbjct: 322 VNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITE 381
Query: 370 MNGKMIGRKPLYVAVAQRKEERKARLQAQF 399
N +++ KPLYVA+AQRK+ R+++L Q
Sbjct: 382 KNQQIVAGKPLYVAIAQRKDVRRSQLAQQI 411
>gi|401625965|gb|EJS43937.1| pab1p [Saccharomyces arboricola H-6]
Length = 577
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/390 (50%), Positives = 271/390 (69%), Gaps = 4/390 (1%)
Query: 12 AVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGY 71
A T + + +V + + SLYVGDLE V+E+ LYD+FS + V S+RVCRD ++SLGY
Sbjct: 24 AATGSESQSVENS--SASLYVGDLEPTVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGY 81
Query: 72 AYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
AYVN+++ + A + LN+ PI G+ RIM+S RDPS+RK G GN+FIKNL IDNKA
Sbjct: 82 AYVNFNDHEAGRKAIDQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKA 141
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L DTF+ FG +LS K+A D NG+SKG+GFV FE E AA+ AI LNGML+N +++YV
Sbjct: 142 LYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPH 201
Query: 192 VRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCF 249
+ R+ER Q +TN+YV N+ TDE +++F FG I SA + KD+DGK + F
Sbjct: 202 LSRKERDSQLEETKAHYTNLYVKNINSETTDEKFQEMFAQFGPIVSASLEKDADGKLKGF 261
Query: 250 GFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKG 309
GFVN+++ + A AVE LN + N + YVGRAQK+ ER L+ ++E R+ + K +G
Sbjct: 262 GFVNYENHEDAVKAVEALNESDLNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQG 321
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNE 369
NL++KNLDDS++DEKL+E F+ +GTITS KVM ++G SKG GF FS PEEAT+A+ E
Sbjct: 322 VNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRSENGKSKGFGFVCFSTPEEATKAITE 381
Query: 370 MNGKMIGRKPLYVAVAQRKEERKARLQAQF 399
N +++ KPLYVA+AQRK+ R+++L Q
Sbjct: 382 KNQQIVAGKPLYVAIAQRKDVRRSQLAQQI 411
>gi|71993209|ref|NP_001021710.1| Protein PAB-1, isoform b [Caenorhabditis elegans]
gi|38422742|emb|CAE54916.1| Protein PAB-1, isoform b [Caenorhabditis elegans]
Length = 583
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 248/573 (43%), Positives = 337/573 (58%), Gaps = 61/573 (10%)
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF ++GKP+RIM+S RDP++R+SG GN+FIKNLD IDNK++ DTF+ FG +LS
Sbjct: 26 AMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILS 85
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQN--- 201
CKVAID +G SKGYGFV FE EEAAQNAI+ +NGML+ K+V+VG F Q RAQ+N
Sbjct: 86 CKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKF---QPRAQRNREL 142
Query: 202 --VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDA 259
+ +FTNVYV N + E L+K+F FG ITS VM +GKS+ FGFV F +P+
Sbjct: 143 GETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVM-TVEGKSKGFGFVAFANPEE 201
Query: 260 AAAAVEKLNGTT--NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
A AV+ L+ +T D +V RAQK++ER A+L+ K EQ + R +K +G NLY+KNL
Sbjct: 202 AETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNL 261
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
D++++D+ LK+ F +G ITS KVM D++G SKG GF F PEEAT A+ EMN KM+
Sbjct: 262 DETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCS 321
Query: 378 KPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTP 437
KPLYVA+AQRKE+R+A+L +Q+ Q A M G Y+ P G YY
Sbjct: 322 KPLYVAIAQRKEDRRAQLASQYMQRLASMRMHGNVPGAAMYNPTQPGPG----YY---VA 374
Query: 438 GLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFM 497
M Q G QQ V PG R G N Y +Q Q Q GV ++ +M +PQ
Sbjct: 375 NPMQQQRNFAGGQQMVRPGGRWGMQNQ---YPVQNQYMMAQGPGVYQN----RMGRPQ-- 425
Query: 498 RNSNQGIRYLDNARNGTDQSVVSMVPVP-----------------------FEVSGMPAT 534
N G R N Q V M P +G A
Sbjct: 426 -NQQGGPRGPPQQYNQVAQGGVRMQGPPRTQNPGVQQQNVPRPPQQQQQQRPAPTGPKAP 484
Query: 535 P----VETPRPVPVPI---STLTSA-LASASPDDRTRMLGEQLYPLVENIEPVH--ASKV 584
P RP + I LTSA LA+A+P ++ ++LGE++Y L+E + P H A K+
Sbjct: 485 PQPYQAYQQRPQGIVIGGQEPLTSAMLAAAAPQEQKQLLGERIYALIEKLYPGHKDAGKI 544
Query: 585 TGMLLEMDQTEVLHLIESPEALKTKVAEAMAVL 617
TGM+LE+D +E++ +++ E ++KV EA +VL
Sbjct: 545 TGMMLEIDNSELIMMLQDSELFRSKVDEAASVL 577
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 100/194 (51%), Gaps = 20/194 (10%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++YV + + N+ L LF++ + S V + K S G+ +V ++NP++A A +
Sbjct: 150 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGK--SKGFGFVAFANPEEAETAVQ 207
Query: 88 ALNFMPINGKPIRIMYS------------------HRDPSIRKSGYGNVFIKNLDTSIDN 129
AL+ I G +++ H+ ++K N+++KNLD ++D+
Sbjct: 208 ALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDD 267
Query: 130 KALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVG 189
L F ++G + S KV D NG+SKG+GFV FE E A +A+ +N ++ K +YV
Sbjct: 268 DGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVA 327
Query: 190 LFVRRQERAQQNVS 203
+ R+++R Q S
Sbjct: 328 IAQRKEDRRAQLAS 341
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LYV +L++ V++ L F + S +V D++ RS G+ +V + P++A +
Sbjct: 251 YQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSK-GFGFVCFEKPEEATS 309
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIR 111
A +N + KP+ + + R R
Sbjct: 310 AVTEMNSKMVCSKPLYVAIAQRKEDRR 336
>gi|365985359|ref|XP_003669512.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
gi|343768280|emb|CCD24269.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/450 (46%), Positives = 298/450 (66%), Gaps = 31/450 (6%)
Query: 9 ATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSS 68
AT+ +SATT + SLYVGDL+ +V+E+ LYD+FS + V S+RVCRD ++S
Sbjct: 26 ATSTPSSATTEN-----SSASLYVGDLDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTS 80
Query: 69 LGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSID 128
LGYAYVN+++ + A E LN+ PI G+ RIM+S RDP++RK G N+FIKNL + ID
Sbjct: 81 LGYAYVNFNDHEAGKKAIEKLNYTPIKGRLCRIMWSQRDPALRKKGSANIFIKNLHSDID 140
Query: 129 NKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYV 188
NKAL DTF+ FG +LS K+A D G+SKG+GFV FE++ AA+ AI LNGML+N ++++V
Sbjct: 141 NKALYDTFSVFGNILSSKIATDETGKSKGFGFVHFEDDTAAKEAIDALNGMLLNGQEIFV 200
Query: 189 GLFVRRQERAQQNVSPK--FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKS 246
G + R+ER Q K FTN+YV N+ TDE+ ++F +G + SA + K DGK
Sbjct: 201 GPHLSRKERDSQLEESKANFTNIYVKNINLETTDEEFTELFSKYGKVLSAALEKTEDGKL 260
Query: 247 RCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK 306
+ FGFV+F++ + AA AVE+LNG+ D+ +V RAQK+ ER +L+ ++E R+ + K
Sbjct: 261 KGFGFVDFENHEDAAKAVEELNGSQFKDQELFVSRAQKKYERMQELKKQYEASRLEKMAK 320
Query: 307 LKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRA 366
+G NL++KNLDDSI+DEKLKE F+ +G ITS +VM ++G S+G GF FS PEEAT+A
Sbjct: 321 YQGVNLFIKNLDDSIDDEKLKEEFAPYGNITSVRVMRTENGKSRGFGFVCFSTPEEATKA 380
Query: 367 LNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGM---------SPLASGIPG 417
+ E N +++ KPLYVA+AQRK+ R+++L AQ QI+A M + A+GIPG
Sbjct: 381 ITEKNQQIVAGKPLYVAIAQRKDVRRSQL-AQ--QIQARNQMRYQQATAAAAAAAAGIPG 437
Query: 418 YHHGAPRLGPQQLYYGQGTPGLMPPQAAGY 447
+ P Y G+MPP+ +
Sbjct: 438 ------QFMPPMFY------GVMPPRGVPF 455
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 561 RTRMLGEQLYPLV--ENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
+ + LGEQLY V +N++ A K+TGM+L++ +V+ L+E+ E EA A Q
Sbjct: 501 KRQALGEQLYKKVSAKNVDEEAAGKITGMILDLPPQDVVSLLENDELFDQHFKEASAAYQ 560
>gi|366999420|ref|XP_003684446.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
gi|357522742|emb|CCE62012.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
Length = 579
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/453 (45%), Positives = 290/453 (64%), Gaps = 13/453 (2%)
Query: 2 EATGAAAATAAVTSATTAAVPSGYGNV-----SLYVGDLEQNVNESQLYDLFSQVAQVVS 56
E GA AA+ + + + NV SLYVG+L+ +V+E+ LYD+FS + V S
Sbjct: 19 ETEGAPAASETEGTPAASETEANNSNVDTTSASLYVGELDPSVSEALLYDIFSPIGPVTS 78
Query: 57 VRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYG 116
+RVCRD ++SLGYAYVN+++ + A E LN+ PI GKP RIM+S RDP++RK G G
Sbjct: 79 IRVCRDAITKTSLGYAYVNFNDHESGRTAIEKLNYSPIKGKPCRIMWSQRDPALRKKGAG 138
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N+FIKNL IDNKAL DTF+ FG +LSCK+A D G+SKG+GFV FE + AA A+ +
Sbjct: 139 NIFIKNLHPDIDNKALHDTFSVFGNILSCKIATDETGKSKGFGFVHFEEDNAAVEAVDAI 198
Query: 177 NGMLINDKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTIT 234
NGM++N ++VYV V +++R + V FTNVYV N+ +++ +F +G IT
Sbjct: 199 NGMMLNGREVYVAQHVSKKDRESKLEEVKANFTNVYVKNVDVDTPEDEFTALFSKYGPIT 258
Query: 235 SAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRA 294
S + KDS+GK R FGF+NF++ D AA AVE+LN + YVGRAQK+ ER +L+
Sbjct: 259 SIAMEKDSEGKFRGFGFINFENHDDAAKAVEELNDLEFKGQKLYVGRAQKKYERLQELKK 318
Query: 295 KFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGF 354
++E R+ + K +G NL++KNLDDSI+DEKL+ F+ FG+ITS KVM ++ G SK GF
Sbjct: 319 QYEASRLEKLAKYQGVNLFVKNLDDSIDDEKLEAEFAPFGSITSAKVMRNEEGKSKNFGF 378
Query: 355 AAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASG 414
FS PEEAT+A+ E N +++ KPLYVA+AQRK+ R+++L AQ Q R +
Sbjct: 379 VCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQL-AQQIQARNQLRYQQATAA 437
Query: 415 IPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGY 447
G P Q ++Y G+MPP+ +
Sbjct: 438 AAAAAAGMPGQFMQPMFY-----GVMPPRGVPF 465
>gi|367008356|ref|XP_003678678.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
gi|359746335|emb|CCE89467.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
Length = 588
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/372 (51%), Positives = 267/372 (71%), Gaps = 2/372 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVG+L+ +V+E+ LYD+FS + V S+RVCRD ++SLGYAYVN+++ + A E
Sbjct: 43 SLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKTAIEK 102
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LN+ PI G P RIM+S RDPS+RK G GN+FIKNL IDNKAL DTF+ FG +LSCK+A
Sbjct: 103 LNYAPIKGVPCRIMWSQRDPSMRKKGSGNIFIKNLHPDIDNKALHDTFSVFGNILSCKIA 162
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D G S+G+GFV FE++EAA+ AI +NGML+N ++VYV V +++R + F
Sbjct: 163 TDEAGNSRGFGFVHFEDDEAAKEAIDAINGMLLNGQEVYVAQHVSKKDRQSKLDEAKANF 222
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV N+ DE+ ++ F G ITSA + KD++GK R FGFVN+++ + AA AVE+
Sbjct: 223 TNVYVKNIHPDTGDEEFEEFFTKVGPITSAHLEKDNEGKLRGFGFVNYENHNDAAKAVEE 282
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
LN T + +VGRAQK+ ER +L+ ++E R+ + EK +G NL++KNLDD+I+D+KL
Sbjct: 283 LNETDFKGQTLHVGRAQKKHERLQELKKQYEAFRLEKLEKYQGVNLFVKNLDDTIDDQKL 342
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
+E F+ +GTITS KVM ++G SKG GF FS PEEAT+A+ E N +++ KPLYVA+AQ
Sbjct: 343 EEEFAPYGTITSVKVMRSENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 402
Query: 387 RKEERKARLQAQ 398
RK+ R+++L Q
Sbjct: 403 RKDVRRSQLAQQ 414
>gi|332208761|ref|XP_003253477.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 590
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 239/611 (39%), Positives = 344/611 (56%), Gaps = 54/611 (8%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SGY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 6 SGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF + G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ FG +
Sbjct: 66 ERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNI 125
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKVA D +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F R+ER +
Sbjct: 126 LSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAELG 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +FTN+YV NL V ++ L+ +F FG + S VM+D+ G SRCFGFVNF+ + A
Sbjct: 185 ARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEA 244
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNL 317
AV +NG + ++ Y GRAQKR ER+ +L+ +FE Q+R+ RY+ +G
Sbjct: 245 QKAVVHMNGKEVSGRLLYAGRAQKRMERQNELKRRFEQMKQDRLRRYQLSRG-------- 296
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
+ G + + S P A A+ EMNG+++G
Sbjct: 297 --------------------PAQCWAWPVGRREAAQPQEPSFPTPAALAVTEMNGRIVGT 336
Query: 378 KPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPG--------YHHGAPRLGPQQ 429
KPLYVA+AQRKEERKA L Q+ Q + M L++ + G + P+ Q
Sbjct: 337 KPLYVALAQRKEERKAILTNQYMQRLS--TMRTLSNPLLGSFQQPSSYFLPAVPQPPAQA 394
Query: 430 LYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTH 489
YYG G + P Q A Q P ++ + + + VR++
Sbjct: 395 AYYGCGP--VTPTQPAPRWTSQPPRPSC-----ASMVRPPVVPRRPLAPISSVRQASTQV 447
Query: 490 QMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVP-IST 548
P R +N G + G ++P + V+ P V +P
Sbjct: 448 PRTVPHTQRVANIGTQTTGPGGVGCCTPGRPLLPYKCSPAAHSTYRVQEPA-VHIPGQEP 506
Query: 549 LTSALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALK 607
LT+++ +A+P ++ +M+GE+LYPL+ ++ A K+TGMLLE+D +E+L ++ESPE+L
Sbjct: 507 LTASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLH 566
Query: 608 TKVAEAMAVLQ 618
K+ EA+AVLQ
Sbjct: 567 AKIDEAVAVLQ 577
>gi|324501709|gb|ADY40758.1| Polyadenylate-binding protein 1 [Ascaris suum]
Length = 595
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 234/597 (39%), Positives = 341/597 (57%), Gaps = 41/597 (6%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +VNE+ L + FS + +V+S+RVCRD R SLGYAYVN+ P+DA A E
Sbjct: 17 SLYVGDLHPDVNETVLLEKFSNIGRVLSIRVCRDALTRRSLGYAYVNFERPEDAKQALET 76
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF ++G+PIRIM+S R PS + GNVF+KNL+ S+++KAL + F+ FG ++SCK+A
Sbjct: 77 MNFDIVHGRPIRIMWSQRRPSTSRVAAGNVFVKNLNGSVNSKALYNKFSVFGNIVSCKLA 136
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
+D +SKGYGFVQFE EEAA+ AI NG++ K++YVG F R ER++Q + F
Sbjct: 137 VDEQSKSKGYGFVQFETEEAARKAIDGTNGVIFEGKRIYVGRFQSRSERSEQAKRTTNCF 196
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNV+V N A+ + E L+++F FG I S V D DGK FGFV F++PD A AV+
Sbjct: 197 TNVFVKNFADILDKEKLQQLFAKFGKIVSCAVSVDGDGKPNGFGFVAFENPDDAEKAVKD 256
Query: 267 LNG--TTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
+ +D+ YV R QK+ ER A+L K++ E+ R ++ +GANLYLKNLDD+I+D+
Sbjct: 257 MQDYHLPGSDRKLYVSRFQKKCERLAELDRKYQLEKNERAKRYEGANLYLKNLDDAIDDD 316
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
L+ F E+G + S KVM G SKG GF F P+EA +A+ M GKM+ KPLYV++
Sbjct: 317 MLRRSFGEYGNVISAKVMRSDDGRSKGFGFVCFDKPDEAVKAMTAMKGKMVCTKPLYVSM 376
Query: 385 AQRKEERKARLQAQFAQIRAPGGM--SPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPP 442
AQRKE+RKA + +Q+ Q A M + SG+ Y + + P YG+GT L
Sbjct: 377 AQRKEDRKAFIASQYMQRIASIRMQATSFGSGMT-YMSDSTVVQPLFACYGRGT--LQRN 433
Query: 443 QAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQ 502
+ V PG +++ + + G G + Q M++
Sbjct: 434 MSNDVAVATMV-----PGQHSWLQMGDIDKSQTQRMAVGAMVYGQQNVRSQYAIMQSDG- 487
Query: 503 GIRYLDNARNGTDQSVVSMVPVPF-----EVSGMPATPVETPRPV-PVPISTLTSALASA 556
+ R T+ P P+ E G A V P+ P +S LT
Sbjct: 488 ------DCRGQTEN------PAPYSQTFSEFRGYMAPRVGQVEPLTPHILSQLTV----- 530
Query: 557 SPDDRTRMLGEQLYPLVENI-EPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAE 612
+ +++ E++ PLV I + A+K+ GMLLEMD E+L ++ + L++++ E
Sbjct: 531 --QKQKQVIAERICPLVPRIYKGPDANKIMGMLLEMDNAELLMMLNNEGLLRSRINE 585
>gi|147838149|emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]
Length = 544
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/435 (49%), Positives = 282/435 (64%), Gaps = 30/435 (6%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL ++ + L+D FS+ + SVR+CRD S SL Y YVN+ +PQDA++A EA
Sbjct: 13 SLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISPQDASHAIEA 72
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIK--------------------NLDTSID 128
N ++GK IR+M+SHRDP R+SG GNVF+K NL SID
Sbjct: 73 KNHTMLHGKVIRVMWSHRDPDARRSGIGNVFVKVYLFAVTSIIDAELYFLVCLNLSDSID 132
Query: 129 NKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYV 188
N L F FG +LSCKV + +G+SKGYGFVQFE+EE A AI+ LNG +I+ KQ+Y
Sbjct: 133 NVRLQAMFQKFGNILSCKVVVTEDGKSKGYGFVQFESEEYANAAIEKLNGFIIDGKQIYA 192
Query: 189 GLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRC 248
G FVR+ +R N K+TN+Y+ NL VT+E L++ F FG I S ++ KD +G SR
Sbjct: 193 GKFVRKTDRVLPNPDAKYTNLYIKNLDPDVTEEALREKFFEFGKIASLVISKDENGMSRG 252
Query: 249 FGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLK 308
FGFVNF+SP+ A A+E LNG KV YV RAQK+AERE LR +FE++R + K +
Sbjct: 253 FGFVNFESPEDAKRALEALNGLQLGSKVLYVARAQKKAEREQLLRRQFEEKRNEQILKYR 312
Query: 309 GANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALN 368
G+N+Y+KN+DD++ND+ L+E FS G ITS K+M DQ G SKG GF FS P+EA++A+N
Sbjct: 313 GSNVYVKNIDDNVNDDDLREHFSVCGKITSAKLMRDQKGISKGFGFVCFSTPDEASKAVN 372
Query: 369 EMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQ 428
+G M RKPLYVA+AQRKE+R+A+LQ +AQ R G P IPG G
Sbjct: 373 TFHGYMFHRKPLYVAIAQRKEDRQAQLQLHYAQ-RMAGLAGPSTPVIPG--------GYP 423
Query: 429 QLYYGQGTPGLMPPQ 443
LYY PG++PP+
Sbjct: 424 PLYY-TAPPGVIPPR 437
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD-QHGFSKGSGFAAFSMPEEATRALN 368
A+LY+ +L I D L + FSEF ++ S ++ D G S G+ F P++A+ A+
Sbjct: 12 ASLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISPQDASHAIE 71
Query: 369 EMNGKMIGRKPLYVAVAQRK-EERKARLQAQFAQI 402
N M+ K + V + R + R++ + F ++
Sbjct: 72 AKNHTMLHGKVIRVMWSHRDPDARRSGIGNVFVKV 106
>gi|452984370|gb|EME84127.1| hypothetical protein MYCFIDRAFT_202901 [Pseudocercospora fijiensis
CIRAD86]
Length = 715
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 229/550 (41%), Positives = 311/550 (56%), Gaps = 91/550 (16%)
Query: 6 AAAATAAVTSATTAAVPSGYG--NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQ 63
A A + T+A P+ + SLYVG+L+ +V E+ L++LFS + QV S+RVCRD
Sbjct: 31 AVPAGGDIGETPTSAAPTNANPNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDA 90
Query: 64 SKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
R SLGYAYVNY++ D A E LN+ I GKP RIM+S RDP++RK+G GNVFIKNL
Sbjct: 91 VTRRSLGYAYVNYNSAADGERALEELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNL 150
Query: 124 DTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND 183
D +IDNKAL DTFAAFG +LSCKVA+D +G SKGYGFV +E +AA AIK +NGML+N+
Sbjct: 151 DAAIDNKALHDTFAAFGNILSCKVAVDEHGNSKGYGFVHYETSDAANQAIKSVNGMLLNE 210
Query: 184 KQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD 241
K+V+VG + +++R + + FTN+YV N+ TD++ +++F +G ITSA + D
Sbjct: 211 KKVFVGHHIPKKDRMSKFEEMKANFTNIYVKNIDAETTDDEFRELFEKYGQITSASLAHD 270
Query: 242 SDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERI 301
GK R FGFVNF + AA AV++LN + YVGRAQK+ ERE +LR ++E +R
Sbjct: 271 DQGKVRGFGFVNFIRHEDAAKAVDELNDLDFKGQKLYVGRAQKKHEREEELRKQYEAQRQ 330
Query: 302 SRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSK----------- 350
+ K +G NLY+KNL D I+DE+L+++F +G ITS KVM D K
Sbjct: 331 EKSAKYQGVNLYVKNLADEIDDEELRKIFEPYGAITSAKVMRDTTPLDKVEGAEKEDGEK 390
Query: 351 -----------------------------------------GSGFAAFSMPEEATRALNE 369
G GF FS P+EAT+A+ E
Sbjct: 391 KESESSAEDKEEEKKDDADELAKKLDTVTIGGEKKVLGKSKGFGFVCFSNPDEATKAVTE 450
Query: 370 MNGKMIGRKPLYVAVAQRKEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGAPRLG 426
+N KMI KPLYVA+AQRKE RK++L+A Q+R A G+P +
Sbjct: 451 LNQKMIHSKPLYVALAQRKEVRKSQLEASIQARNQVRMQ--QQATAGGLPQQF-----MA 503
Query: 427 PQQLYYG-QGTPGLMP------------PQAAGYGFQQQVFPGLRP----GGPNYI---- 465
P Q++ G G P ++P PQ G Q+ FPG+ GGP +
Sbjct: 504 PPQMFIGPNGQPMMIPGGRGQMPFVQGMPQGQG---QRGGFPGMPQQGGRGGPAALPQMP 560
Query: 466 -MPYHLQRQV 474
MPY Q+
Sbjct: 561 QMPYGFPPQM 570
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHL 599
+AL +A P + +MLGE LYP + +P A K+TGMLLEMD E+++L
Sbjct: 667 AALGAAPPPQQKQMLGEALYPKIHAQQPELAGKITGMLLEMDNEELINL 715
>gi|323448756|gb|EGB04650.1| hypothetical protein AURANDRAFT_55048 [Aureococcus anophagefferens]
Length = 604
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 239/562 (42%), Positives = 324/562 (57%), Gaps = 60/562 (10%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ + SLYVGDL + +E L+++F+ V V S+RVCRD R SLGYAYVN+ N DA
Sbjct: 9 FHSASLYVGDLATDASEGLLFEIFNTVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAER 68
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +N+ I KP RIM+S RDP++RKSG GNVF+KNLD SID+KAL DTF+ FG +LS
Sbjct: 69 ALDTMNYTLIKSKPCRIMWSQRDPTLRKSGVGNVFVKNLDASIDHKALFDTFSLFGNILS 128
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA D G+S+GYG+V +E+E+AA +AI +N M I DK+VYVG FVRR ER+ Q+
Sbjct: 129 CKVATDEAGRSQGYGYVHYESEDAATDAINKINSMTICDKEVYVGHFVRRTERSGQS--- 185
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
+TN+YV N +E L+K F FG ITS +DG + FG+VNF++ DAA AA+
Sbjct: 186 DWTNLYVKNFPADWDEETLRKAFETFGAITSCKAAAAADGSA--FGWVNFEAHDAAVAAM 243
Query: 265 EKLNGT-----------TNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLY 313
+ LNG T +VGRAQK+ ERE +L+AKF+ +I R +K +G NL+
Sbjct: 244 DALNGIAELPGQAGGAPTTLKAPLFVGRAQKKIERERELKAKFDAAKIERIKKYQGVNLF 303
Query: 314 LKNLDDSINDEKLKELFSEFGTITSCKVMVD-QHGFSKGSGFAAFSMPEEATRALNEMNG 372
+KNLDD ++D++L+E F+E+GTITS +VM + G S+G GF FS PEEA +A+ EMN
Sbjct: 304 VKNLDDGLDDDQLRENFAEYGTITSARVMREPATGTSRGFGFVCFSSPEEAAKAVTEMNN 363
Query: 373 KMIGRKPLYVAVAQRKEERKARLQAQFAQIRA-------PGGMSPLASGIPGY------- 418
K++ KP++VA+AQRKE R+A+L+AQ AQ R PG M P +G+P +
Sbjct: 364 KLVLGKPIFVALAQRKEVRRAQLEAQHAQRRTTAPYGAHPGAMGP--AGVPPHAPQGLHP 421
Query: 419 -HHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPG 477
H GAP + Y G P P G G+ P Y+M R
Sbjct: 422 AHLGAPYGTAMPIMYAAGAPNGHPMGMTPQGHPGVPIAGVPPNARGYVMARGSPRGPMTD 481
Query: 478 QRTGVRRSGNTHQ----MQQPQFMRNSNQG---------------------IRYLDNARN 512
R G G Q M Q + S+QG +Y NARN
Sbjct: 482 PRAGFGHGGAPRQGGYPMHPGQMQQMSSQGGSNRRSRNRGGQGGQGQGAQQYKYTQNARN 541
Query: 513 GTDQSVVSMVPVPFEVSGMPAT 534
+ S+ +P + MPAT
Sbjct: 542 AANMP-PSIPQLPPQAHLMPAT 562
>gi|384486188|gb|EIE78368.1| hypothetical protein RO3G_03072 [Rhizopus delemar RA 99-880]
Length = 499
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/390 (50%), Positives = 278/390 (71%), Gaps = 3/390 (0%)
Query: 15 SATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYV 74
S+T+A + + SLYVG+L+ +V E+ L+++F+ + V S+RVCRD R SLGYAYV
Sbjct: 15 SSTSAPESAPLASASLYVGELDPSVTEAMLFEMFNIIGPVSSIRVCRDAVTRRSLGYAYV 74
Query: 75 NYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCD 134
N+ DA A E LN+ I G+ RIM+S RDPS+RK GN+FIKNLD SID+KAL D
Sbjct: 75 NFHRMADAERALETLNYSMIKGRSCRIMWSQRDPSLRKGNNGNIFIKNLDPSIDHKALHD 134
Query: 135 TFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRR 194
TF+AFG +LSCK+A D G SKGYGFV +E EAA++AIK +NGML+ND++V+VG + R
Sbjct: 135 TFSAFGNILSCKIAHDEQGNSKGYGFVHYETLEAAESAIKSVNGMLLNDRKVFVGHHISR 194
Query: 195 QERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFV 252
+ER + +FTN+YV N+ VTDE+L ++FG +GTITS ++ +D DG S+ FGFV
Sbjct: 195 KERESKLGESRVQFTNIYVKNIPFDVTDEELSQLFGKYGTITSCVITRDDDGTSKGFGFV 254
Query: 253 NFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANL 312
NF+ A AV+ L+ + YV RAQK+ ERE +LR ++E+ ++ + K +G NL
Sbjct: 255 NFEKHQDAQNAVDDLHKKDFRGQDLYVSRAQKKNEREEELRRQYEEAKLEKMSKYQGVNL 314
Query: 313 YLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH-GFSKGSGFAAFSMPEEATRALNEMN 371
Y+KNLDD ++D++L++ FS +G ITS K+M D+ S+G GF F+ PE+ATRA+ EMN
Sbjct: 315 YVKNLDDDMDDDRLRDEFSVYGVITSAKIMRDEKTNISRGFGFVCFTSPEDATRAVTEMN 374
Query: 372 GKMIGRKPLYVAVAQRKEERKARLQAQFAQ 401
G++IG KP+YVA+AQRKE R+++L+ Q AQ
Sbjct: 375 GRIIGSKPIYVAIAQRKEVRRSQLEIQMAQ 404
>gi|226287551|gb|EEH43064.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 761
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 231/518 (44%), Positives = 306/518 (59%), Gaps = 87/518 (16%)
Query: 14 TSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAY 73
++A T A P + SLYVG+L+ +V E+ L++LFS + QV S+RVCRD R SLGYAY
Sbjct: 43 SAAPTNAQPH---SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAY 99
Query: 74 VNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALC 133
VNY+N D A E LN+ I GKP RIM+S RDP++RK+G GNVFIKNLDT+IDNKAL
Sbjct: 100 VNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALH 159
Query: 134 DTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVR 193
DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+N+K+V+VG +
Sbjct: 160 DTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIA 219
Query: 194 RQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFG 250
+++R + + FTNVYV NL VT+E+ +++F +G ITSA + +D++ GKSR FG
Sbjct: 220 KKDRQSKFEEMKANFTNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFG 279
Query: 251 FVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGA 310
FVNF + D+AAAAVE LN + YVGRAQK+ ERE +LR + E R+ + K +G
Sbjct: 280 FVNFVNHDSAAAAVEDLNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGV 339
Query: 311 NLYLKNLDDSINDEK----------------LKELFSEFGTIT----------------- 337
NLY+KNL D I+DEK +++ S+ G+ +
Sbjct: 340 NLYVKNLTDDIDDEKLRDLFIGFGNITSARVMRDTISDAGSESEKEKEASKDNKENVKEE 399
Query: 338 --------------------SCKVMVDQH-GFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
K D+ G SKG GF FS P+EA++A+ EMN +M+
Sbjct: 400 TKKEAGGEDSAEKTDKAEKPDTKKPTDKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVN 459
Query: 377 RKPLYVAVAQRKEERKARLQAQF--------AQIRAPGGMSPLASGIPGYHHGAPRLGPQ 428
KPLYVA+AQRK+ RK++L+A Q+ A GMS P + P
Sbjct: 460 GKPLYVALAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMS------------QPFMQP- 506
Query: 429 QLYYGQGTPGLMPPQA--AGYGFQQQ---VFPGLRPGG 461
+YY G G +P A G F QQ V PG+ PGG
Sbjct: 507 AVYYPPGQQGFIPANAQRGGMAFAQQPGMVLPGM-PGG 543
>gi|126342190|ref|XP_001379497.1| PREDICTED: polyadenylate-binding protein 1 [Monodelphis domestica]
Length = 669
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/373 (52%), Positives = 261/373 (69%), Gaps = 4/373 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V ES LY+ FS ++S+RVCRD + SLGYAYVN+ + A
Sbjct: 46 SLYVGDLHHDVTESMLYEKFSPAGPILSIRVCRDSVTQHSLGYAYVNFQHRAHAEWVLAT 105
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+N I G PIRIM+S RDP RK G GNVF+KNL+ SIDNKAL DTF+ FG +LSCKV
Sbjct: 106 MNLDVIKGNPIRIMWSQRDPGQRKRGVGNVFVKNLEKSIDNKALYDTFSTFGRILSCKVI 165
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER-AQQNVSPK-F 206
D NG SKGYGFV FE +E+A AI+ +NGML+N+ +V+VG F R+ER ++ V K +
Sbjct: 166 SDENG-SKGYGFVHFETQESAGKAIEKMNGMLLNNLKVFVGRFKSRRERESELGVKAKDY 224
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TN+Y+ N E + D+ L +IF +G S VM D G+S+ FGFV+FQS + A AAV+
Sbjct: 225 TNIYIKNFGENMDDQRLTEIFAKYGPTLSVKVMTDDCGRSKGFGFVSFQSHEDAQAAVDD 284
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
+NG N K YVGRAQK+ ER+ +L+ FEQ + +++ + +G NLY+KNLDD+INDE L
Sbjct: 285 MNGKQLNGKQIYVGRAQKKRERQTELKRHFEQIKQNQHIRYQGVNLYIKNLDDTINDEHL 344
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
++ FS FGTITS KVM++ +G SKG GF FS ++A +A EMNGK++ KPLYV++AQ
Sbjct: 345 RKEFSPFGTITSAKVMME-NGRSKGFGFVCFSSSKDAAKASREMNGKLVASKPLYVSLAQ 403
Query: 387 RKEERKARLQAQF 399
RKEER+ L+ Q+
Sbjct: 404 RKEERRMHLKNQY 416
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 168/302 (55%), Gaps = 19/302 (6%)
Query: 103 YSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQ-SKGYGFV 161
+ H P+ S ++++ +L + L + F+ G +LS +V DS Q S GY +V
Sbjct: 35 HGHSTPN---SPTASLYVGDLHHDVTESMLYEKFSPAGPILSIRVCRDSVTQHSLGYAYV 91
Query: 162 QFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDE 221
F++ A+ + +N +I + + R + ++ V NV+V NL +++ ++
Sbjct: 92 NFQHRAHAEWVLATMNLDVIKGNPIRIMWSQRDPGQRKRGVG----NVFVKNLEKSIDNK 147
Query: 222 DLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGR 281
L F FG I S V+ D +G S+ +GFV+F++ ++A A+EK+NG N+ +VGR
Sbjct: 148 ALYDTFSTFGRILSCKVISDENG-SKGYGFVHFETQESAGKAIEKMNGMLLNNLKVFVGR 206
Query: 282 AQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKV 341
+ R ERE++L K + N+Y+KN ++++D++L E+F+++G S KV
Sbjct: 207 FKSRRERESELGVKAKDY----------TNIYIKNFGENMDDQRLTEIFAKYGPTLSVKV 256
Query: 342 MVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ 401
M D G SKG GF +F E+A A+++MNGK + K +YV AQ+K ER+ L+ F Q
Sbjct: 257 MTDDCGRSKGFGFVSFQSHEDAQAAVDDMNGKQLNGKQIYVGRAQKKRERQTELKRHFEQ 316
Query: 402 IR 403
I+
Sbjct: 317 IK 318
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 547 STLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEAL 606
S + S LASA P ++ R+LGE+L+P+++ I P A K+TGMLLE D +E+LHL+ESPE+L
Sbjct: 577 SLMPSMLASALPPEQKRILGERLFPIIQGISPTLAGKITGMLLETDNSEILHLLESPESL 636
Query: 607 KTKVAEAMAVLQEAAARSDVNEK 629
KV EA AVLQ A+ +V +K
Sbjct: 637 HCKVKEAAAVLQTHQAK-EVTQK 658
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LY+ +L+ +N+ L FS + S +V + + S G+ +V +S+ +DAA
Sbjct: 325 YQGVNLYIKNLDDTINDEHLRKEFSPFGTITSAKVMMENGR--SKGFGFVCFSSSKDAAK 382
Query: 85 AKEALNFMPINGKPIRIMYSHR 106
A +N + KP+ + + R
Sbjct: 383 ASREMNGKLVASKPLYVSLAQR 404
>gi|339246497|ref|XP_003374882.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316971853|gb|EFV55580.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 758
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/419 (48%), Positives = 273/419 (65%), Gaps = 36/419 (8%)
Query: 18 TAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYS 77
T A+ + SLYVGDL +V E+ L++ FS V+S+RVCRD R SLGYAYVNY
Sbjct: 2 TTAIAQNFAMASLYVGDLHPDVTEAMLFEKFSHAGPVLSIRVCRDAVTRRSLGYAYVNYQ 61
Query: 78 NPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFA 137
DA A + +NF P+ G+PIRIM+S RDPS+R+SG GNVFIKNLD ID+KA+ DTF+
Sbjct: 62 QTPDAERALDTMNFDPVFGRPIRIMWSQRDPSLRRSGVGNVFIKNLDKDIDHKAIYDTFS 121
Query: 138 AFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
FG +LSCKVA D NG SKGYG YVG F+ R +R
Sbjct: 122 NFGNILSCKVATDENGVSKGYG---------------------------YVGKFIPRAQR 154
Query: 198 AQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQ 255
++ + KFTNVYV N E TD+ L +F FG I S +VMK+ D KS+ FGFV+F+
Sbjct: 155 MREIGETTRKFTNVYVKNFDENFTDQCLVDLFSKFGKIQSCVVMKEDD-KSKGFGFVSFE 213
Query: 256 SPDAAAAAVEKLNG-TTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYL 314
+P+ A AAV+++N + K YVGRAQK+AER+A+L+ ++E ++ R ++ +G NLYL
Sbjct: 214 NPEDAEAAVKEMNEYQLPSGKKLYVGRAQKKAERQAELKRRYEMLKLERIQQYEGVNLYL 273
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLDDS++D +L++ F +FG ITS KVM D+ G SKG GF FS P+EATRA++EMN +
Sbjct: 274 KNLDDSVDDAQLRKAFEKFGVITSAKVMTDEKGQSKGFGFVCFSSPDEATRAVSEMNNQK 333
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQ----IRAPG-GMSPLASGIPGYHHGAPRLGPQ 428
+G KPLYVA+AQRKE+RKA+L +Q Q +R GM + SG + P+ GP+
Sbjct: 334 LGNKPLYVALAQRKEDRKAQLASQLVQRVNALRFQTVGMGQMYSGSGYFFPTMPQAGPR 392
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 550 TSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTK 609
+S L+SA P ++ +MLGE+L+PL+ I A K+TGMLLEMD E+L+++ESP+ L K
Sbjct: 561 SSMLSSAPPQEQKQMLGERLFPLIMEIHKDLAGKITGMLLEMDNGELLNMLESPDLLNAK 620
>gi|156846854|ref|XP_001646313.1| hypothetical protein Kpol_1032p49 [Vanderwaltozyma polyspora DSM
70294]
gi|156116988|gb|EDO18455.1| hypothetical protein Kpol_1032p49 [Vanderwaltozyma polyspora DSM
70294]
Length = 580
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/474 (45%), Positives = 308/474 (64%), Gaps = 17/474 (3%)
Query: 3 ATGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRD 62
++G+AA ++ ++ + + + SLYVG+L+ +V+E+ LYD+FS + V S+RVCRD
Sbjct: 28 SSGSAAEVSSASNGGNSG--TAVDSASLYVGELDPSVSEALLYDIFSPIGPVSSIRVCRD 85
Query: 63 QSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKN 122
++SLGYAYVN+++ A E LN+ PI GKP RIM+S RDPS+RK+G GN+FIKN
Sbjct: 86 AVTKTSLGYAYVNFNDHDSGKVAIEKLNYTPIKGKPCRIMWSQRDPSMRKNGSGNIFIKN 145
Query: 123 LDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIN 182
L IDNKAL DTF+ FG +LSCK+A D G+SKG+GFV FE + AA AI +NGM++N
Sbjct: 146 LHADIDNKALHDTFSVFGNILSCKIATDETGKSKGFGFVHFEEDTAASEAIDAINGMMLN 205
Query: 183 DKQVYVGLFVRRQERAQQNVSPK--FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMK 240
+VYV V R++R + + K FTNVYV N+ T+E+ +++F FG ITS + K
Sbjct: 206 GLEVYVAAHVSRKDRESKFEAAKANFTNVYVKNVDLEATEEEFEELFKKFGPITSISMEK 265
Query: 241 DSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQER 300
DS+GK R FGFVN+++ ++AA AV++LN + YVGRAQK+ ER +L+ ++E+ +
Sbjct: 266 DSEGKFRGFGFVNYENHESAAKAVDELNDLEFKSQKLYVGRAQKKYERLQELKKQYEEAK 325
Query: 301 ISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMP 360
+ + K +G NL++KNLDD+I+DE LK+ F FGTITS KVM ++ G SKG GF FS P
Sbjct: 326 LEKMAKYQGVNLFVKNLDDTIDDELLKKEFESFGTITSVKVMRNETGKSKGFGFVCFSSP 385
Query: 361 EEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHH 420
EEATRA+ E N +++ KPLYVA+AQRK+ R+++L AQ Q R +
Sbjct: 386 EEATRAITEKNQQIVAGKPLYVALAQRKDVRRSQL-AQQIQARNQMRYQQATAAAAAAAA 444
Query: 421 GAPRLGPQQLYYGQGTPGLMPPQAAGY-GFQQQVFPGLRP-----GGPNYI-MP 467
G P Q ++Y G+MPP+ + G Q F G+ P G P Y MP
Sbjct: 445 GIPGQFMQPMFY-----GVMPPRGVPFNGANPQQFAGMPPQQFRNGAPVYAGMP 493
>gi|209881749|ref|XP_002142312.1| polyadenylate-binding protein [Cryptosporidium muris RN66]
gi|209557918|gb|EEA07963.1| polyadenylate-binding protein, putative [Cryptosporidium muris
RN66]
Length = 723
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 253/724 (34%), Positives = 367/724 (50%), Gaps = 146/724 (20%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL+ +V E+ LY++F+ VA V SVR+CRD R SLGYAYVNY++ DA A +
Sbjct: 13 SLYVGDLDPDVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERALDT 72
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF I +P RIM+ RDP+ R++ GNVF+KNLD SIDNK L DTF+ FG ++SCK+A
Sbjct: 73 LNFTCIRSRPCRIMWCLRDPASRRNNEGNVFVKNLDKSIDNKTLFDTFSLFGNIMSCKIA 132
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
DS G S GYGF+ FE+ E+A+ AI LNGM++ D+ +YVG F R+ ER + FTN
Sbjct: 133 TDSEGNSLGYGFIHFEHPESAKEAIARLNGMILGDRPIYVGKFQRKAERFSEK-DKTFTN 191
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
VYV ++ +T ++E L +FG +G I+S ++ DS G R FGFVNF+ P++A AV L+
Sbjct: 192 VYVKHIPKTWSEETLHTLFGVYGKISSLVLQSDSKG--RPFGFVNFEDPESAKKAVANLH 249
Query: 269 -----------GTTNNDKVW-------------------------YVGRAQKRAEREADL 292
+ N+++ Y R K +EAD+
Sbjct: 250 NALVTPLGVELNSNNSERTESGKDDGLSSISSNTESSDETVESNDYKQRNDKEDPQEADV 309
Query: 293 RAKFEQER------------ISRYEK---------------------LKGANLYLKNLDD 319
++E +SR +K +G NLY+KNL +
Sbjct: 310 EKNSDEENSVPFDVQPNRLYVSRAQKRNERQVVLKSQHEAARESQNRYQGVNLYVKNLSE 369
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
S+ + L+ LF +GTI+S + D+ G S+G GF +F P+EAT+A+ EM+ K++ KP
Sbjct: 370 SMTESDLRSLFEPYGTISSVSIKTDESGISRGFGFVSFLSPDEATKAITEMHLKLVRGKP 429
Query: 380 LYVAVAQRKEERKARLQAQFAQIRAPG----------------------GMSPLASGIPG 417
LYV + +RKE+R RLQ + P G P IPG
Sbjct: 430 LYVGLHERKEQRALRLQQRIRGGTVPPVLRPGTIPPGPPTAVHGAPMQFGAPPQMYFIPG 489
Query: 418 ----------YHHGAPRLG---------------PQQLYYGQGT-PGLMPPQAAGYGFQQ 451
H+ P +G P ++ YG G P M Q+ GY
Sbjct: 490 NPAVAATAGMQHNRTPMVGSFPNQGVMASPWRPNPTRIPYGTGALPPQMTAQSVGYNPGV 549
Query: 452 QVFP----GLRPGGPNYIMPYHLQRQVHPGQRT--------GVRRSGNTHQMQQPQFMRN 499
P + GP + P R QR G R + HQ+Q P+
Sbjct: 550 NGIPSNNGSIPQTGPQSVNPAQNIRTGGNSQRIHNRHMQGQGGSRPTHGHQVQIPK---- 605
Query: 500 SNQGIRYLDNARNGTDQSVVSMVP---VPFEVSGMPATPVETPRPVPVPISTLTSALASA 556
Q ++ + + +DQ V M+P V + SG+ + P+ +P+ ST LA+A
Sbjct: 606 --QSFKFPSHIKT-SDQPRVDMIPGGLVNMDPSGISSVPMIPQSDIPLTAST----LATA 658
Query: 557 SPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAV 616
SP + ++LGE+L+P++ +P A K+TGM+LEMD E+L ++ S +K KV EAM V
Sbjct: 659 SPSMQKQLLGERLFPIIAQYQPELAGKITGMMLEMDNNELLEILNSDAEIKNKVDEAMIV 718
Query: 617 LQEA 620
L+ A
Sbjct: 719 LERA 722
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LYV +L +++ ES L LF + SV + D+S S G+ +V++ +P +A
Sbjct: 357 YQGVNLYVKNLSESMTESDLRSLFEPYGTISSVSIKTDESGISR-GFGFVSFLSPDEATK 415
Query: 85 AKEALNFMPINGKPIRIMYSHR 106
A ++ + GKP+ + R
Sbjct: 416 AITEMHLKLVRGKPLYVGLHER 437
>gi|395818359|ref|XP_003782600.1| PREDICTED: polyadenylate-binding protein 1, partial [Otolemur
garnettii]
Length = 539
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 239/593 (40%), Positives = 320/593 (53%), Gaps = 81/593 (13%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RK
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKX------------------------------- 96
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 97 --XXXXXXXXSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 154
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 155 AKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQX 214
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
+NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 215 XXXXMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 274
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYV
Sbjct: 275 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 333
Query: 383 AVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPRL 425
A+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 334 ALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAYY 391
Query: 426 GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVHPGQRTGVRR 484
P Q+ + +P A + FQ PG +RP P P+ R P R
Sbjct: 392 PPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMR---PASSQVPRX 444
Query: 485 SGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPV 544
PQ+ + G+R N Q + PA V+ P+
Sbjct: 445 XXXXAVRTVPQYKYAA--GVRNPQQHLNAQPQVTMQ----------QPAVHVQGQEPL-- 490
Query: 545 PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVL 597
S LASA P ++ +MLGE+L+PL++ + P A K+TGMLLE+D +E+L
Sbjct: 491 ----TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELL 539
>gi|432095458|gb|ELK26654.1| Polyadenylate-binding protein 4 [Myotis davidii]
Length = 657
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/394 (53%), Positives = 268/394 (68%), Gaps = 28/394 (7%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFS-------QVAQVVSVRVCRDQSKRSSLGYA 72
A S Y SLYVG+L +V E+ LY+ S V + ++ V + K SL
Sbjct: 3 AAASSYPMASLYVGNLHGDVTEAMLYEKLSPRDLTHLWVIKNITNCVLYPRLKCVSL--- 59
Query: 73 YVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKAL 132
A A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL
Sbjct: 60 --------VAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAL 111
Query: 133 CDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFV 192
DTF+AFG +LSCKV D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F
Sbjct: 112 YDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFK 170
Query: 193 RRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFG 250
R+ER + + +FTNVY+ N E V DE LK++F FG S VM+D GKS+ FG
Sbjct: 171 SRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPTGKSKGFG 230
Query: 251 FVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ---ERISRYEKL 307
FV+++ + A AVE++NG + KV +VGRAQK+ ER+A+L+ KFEQ ERISRY+
Sbjct: 231 FVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQ-- 288
Query: 308 KGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRAL 367
G NLY+KNLDD+I+DEKL++ FS FG+IT +VM++ G SKG GF FS PEEAT+A+
Sbjct: 289 -GVNLYIKNLDDTIDDEKLRKEFSPFGSITRAEVMLED-GRSKGFGFVCFSSPEEATKAV 346
Query: 368 NEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ 401
EMNG+++G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 347 TEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQ 380
>gi|224012523|ref|XP_002294914.1| polyadenlyte binding protein [Thalassiosira pseudonana CCMP1335]
gi|220969353|gb|EED87694.1| polyadenlyte binding protein [Thalassiosira pseudonana CCMP1335]
Length = 612
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/453 (48%), Positives = 296/453 (65%), Gaps = 36/453 (7%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ + SLY+GDL VNE L+++F+ V V S+RVCRD R SLGYAYVNY DA
Sbjct: 6 FSSASLYIGDLLPEVNEGFLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNYHQVADAER 65
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A +++NF I GKP RIM+S RDPS+R+SG GN+F+KNL IDNK L DTF+ FG +LS
Sbjct: 66 ALDSMNFTEIKGKPCRIMWSQRDPSMRRSGVGNIFVKNLHEGIDNKQLYDTFSLFGNILS 125
Query: 145 CKVAID-SNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS 203
CKV D + G SKGYG+V +E EAA +AI+ L+GMLI+ K+V VG+F+RR R Q
Sbjct: 126 CKVVTDKATGLSKGYGYVHYETNEAAASAIEKLDGMLIDGKEVQVGVFMRRDNRPGQ--- 182
Query: 204 PKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAA 263
+TNV++ N+ T++ L++ F FG + SA K+ G S FGFVNF + +AAAAA
Sbjct: 183 ADWTNVFIKNIPFEWTEDKLREEFEGFGEVVSA-KPKEVQG-SLGFGFVNFATHEAAAAA 240
Query: 264 VEKLNG---TTNND-----KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLK 315
V+++N T D KV +VGRAQK+AERE +LRAK+E E+I R K +G NLY+K
Sbjct: 241 VKEMNDKEFTVTEDGEEVTKVLFVGRAQKKAERERELRAKYEAEKIDRIAKFQGVNLYVK 300
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVD-QHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
NLDD++ D+ L++ FS GTITS +VM D + G S+G GF +S PE+ATRA+NEMNGK+
Sbjct: 301 NLDDTVTDDVLRDEFSAMGTITSARVMKDLKTGISRGFGFVCYSTPEDATRAVNEMNGKI 360
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAP-----GGMSPLASGIPGYHHGAPRLGPQ- 428
I KP++VA+AQR++ R+A+L+AQ Q R GG P A +PG + P + P
Sbjct: 361 ILGKPIFVALAQRRDVRRAQLEAQHNQGRGNLPGPMGGAYPGAVPMPGMYRPGPGMQPAY 420
Query: 429 ---QLYYGQGTPGLMPPQAAGYGFQQQVFPGLR 458
Q+ G+G GYG Q Q PG R
Sbjct: 421 PVPQMMQGRG----------GYGMQAQ--PGGR 441
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 98/195 (50%), Gaps = 18/195 (9%)
Query: 199 QQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSP 257
QQ+ + ++Y+ +L V + L +IF G + S V +D+ +S + +VN+
Sbjct: 1 QQSANFSSASLYIGDLLPEVNEGFLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNYHQV 60
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
A A++ +N T K + +Q R+ +R + N+++KNL
Sbjct: 61 ADAERALDSMNFTEIKGKPCRIMWSQ----RDPSMR------------RSGVGNIFVKNL 104
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
+ I++++L + FS FG I SCKV+ D+ G SKG G+ + E A A+ +++G +I
Sbjct: 105 HEGIDNKQLYDTFSLFGNILSCKVVTDKATGLSKGYGYVHYETNEAAASAIEKLDGMLID 164
Query: 377 RKPLYVAVAQRKEER 391
K + V V R++ R
Sbjct: 165 GKEVQVGVFMRRDNR 179
>gi|356537017|ref|XP_003537028.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 502
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 223/508 (43%), Positives = 299/508 (58%), Gaps = 38/508 (7%)
Query: 16 ATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVN 75
AT AAVP+ SLYVGDL V + L++ F++ + SVRVCRD+ SL Y YVN
Sbjct: 5 ATVAAVPA-----SLYVGDLHSEVVDHHLFEAFAEFKTMDSVRVCRDRVTMKSLCYGYVN 59
Query: 76 YSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDT 135
+ + QDA A + N +NGK IR+M+SH DPS RKSG GNVF+KNL SIDN L D
Sbjct: 60 FKSQQDAIRAMKLKNNSYLNGKVIRVMWSHPDPSARKSGRGNVFVKNLAGSIDNAGLHDL 119
Query: 136 FAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ 195
F +G +LS KV + +G+SKGYGFVQFE+EE+A NAI+ LNG + DKQ+YVG FVR+
Sbjct: 120 FQKYGNILSSKVVMSGDGKSKGYGFVQFESEESANNAIEKLNGSTVGDKQIYVGKFVRKG 179
Query: 196 ERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQ 255
+R K+TN+Y+ NL +T+ L++ F FG I S ++ KD +G S+ F FVN++
Sbjct: 180 DRILPGYDAKYTNLYIKNLDSDITEALLQEKFSSFGKIISLVISKDDNGLSKGFAFVNYE 239
Query: 256 SPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLK 315
+PD A A+E +NG K YV RAQK+AERE L +FE++R + K + +NLY+K
Sbjct: 240 NPDDARKAMEAMNGLKFGSKNLYVARAQKKAEREQILHRQFEEKRKEQILKYQASNLYVK 299
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI 375
N+DD + D++L++LFS GTITS KVM D G SKG GF FS PEEA +A+ NG M
Sbjct: 300 NIDDDVTDKELRDLFSSCGTITSVKVMRDDKGISKGFGFVCFSNPEEANKAVRSFNGCMF 359
Query: 376 GRKPLYVAVAQRKEERKARLQAQFA--QIRAPGGMSPLASGIPG------YHHGAPRLGP 427
RKPLY+A+AQRK +RK +L +A Q G +P+ IPG YH A ++
Sbjct: 360 HRKPLYIAIAQRKMDRKTQLNLHYAPQQTGLDGSSTPV---IPGGFPPYFYHSVASQMFQ 416
Query: 428 QQLYY-------GQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRT 480
L Y G +PP + FQQ P + PN+ + R G
Sbjct: 417 SGLLYQPLGLRSGWRANDSVPPTRS---FQQSHLPQV----PNFTRHHRQNRSRMNGN-- 467
Query: 481 GVRRSGNTHQ-MQQPQFMRNSNQGIRYL 507
V G H + PQ+ Q + YL
Sbjct: 468 -VNSLGKAHSGVYIPQYY----QAVEYL 490
>gi|313232178|emb|CBY09289.1| unnamed protein product [Oikopleura dioica]
Length = 611
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 248/642 (38%), Positives = 355/642 (55%), Gaps = 77/642 (11%)
Query: 18 TAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYS 77
T PS Y SLYVGDL E+ LYD FSQ V+S+RVCRD R SLGYAYVN+
Sbjct: 2 TTVAPS-YPMASLYVGDLHPEATEAMLYDKFSQAGPVLSIRVCRDMITRRSLGYAYVNFQ 60
Query: 78 NPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFA 137
P+DA A + +NF+ ++ + S + + L T+ K F+
Sbjct: 61 RPEDAERAIDTMNFIQLSVNLASAISSSKTWT------------RLSTT---KCCTIPFS 105
Query: 138 AFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
AFG +LSCKV ++ G+SKGYGFV FE EEAA AI+ L+GML+NDK+V+VG F R ER
Sbjct: 106 AFGNILSCKVNVNLAGESKGYGFVHFETEEAAVKAIEKLDGMLMNDKKVFVGRFKSRGER 165
Query: 198 AQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQ 255
++ + + +FTNV++ NL D L ++FG G++ S + D +GKSR FGFV+F+
Sbjct: 166 VREYGDRAKQFTNVFIKNLPAEWDDAKLTEVFGEHGSVMSVALATDENGKSRQFGFVSFE 225
Query: 256 SPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLK 315
+ + A VEKL+ K +VGRAQK+AER+A+L+ KFE+ + R ++ +G NLY+K
Sbjct: 226 THECAEKVVEKLHDKEFEGKKIFVGRAQKKAERQAELKVKFEKLKHERNQRYQGVNLYVK 285
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVD---QHGFSKGSGFAAFSMPEEATRALNEMNG 372
NLDDSI D+ L+E F+ +G ITS KVM D + SKG GF F+ EEAT+A+ EMNG
Sbjct: 286 NLDDSITDDILREHFAPYGNITSSKVMTDTDVEGTRSKGFGFVCFTSAEEATKAVTEMNG 345
Query: 373 KMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYY 432
++I KPLYVA+AQRK+ERKA LQ Q+ Q R GM + + P+ G LY
Sbjct: 346 RIIASKPLYVALAQRKDERKAHLQQQYMQ-RVTTGMR-----LQAFPTNQPQYG--NLY- 396
Query: 433 GQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQV---HPGQRTGVRRSGNTH 489
MPP + F+ + P R Y LQ Q+ HP R R S T
Sbjct: 397 -------MPPPIQQHPFRMSIRPTPRWSQVKYD---QLQSQINSEHPALRLR-RESSRTF 445
Query: 490 QM------QQPQFMRNS-----NQGIR------------YLDNARNGTDQSVV------S 520
+ + + + NS G+R Y A + +QS++ +
Sbjct: 446 FIFSFVTSSECRMIFNSGGPRAQNGVRGIAPITRFPANNYTARAGSRPNQSIIYKPGVRN 505
Query: 521 MVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVH 580
+P P E +PA P+ + LA+A P ++ ++LGE+LYP + + P
Sbjct: 506 PLPTPAEAQ-IPAEQAAQPKAPDTEQPLNATILAAAPPQEQKQLLGERLYPSIRQLYPEL 564
Query: 581 ASKVTGMLLEMDQTEVLHLIES---PEALKTKVAEAMAVLQE 619
K+TGMLLE++ +E+L ++++ P L+ KV EA+ VL +
Sbjct: 565 CGKITGMLLEIENSELLAMLDTKSNPGLLQEKVQEAVTVLTQ 606
>gi|50293737|ref|XP_449280.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690665|sp|Q6FKG4.1|PABP_CANGA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49528593|emb|CAG62254.1| unnamed protein product [Candida glabrata]
Length = 579
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/372 (49%), Positives = 262/372 (70%), Gaps = 2/372 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL+ +V+E+ LYD+FS + V S+RVCRD ++SLGYAYVN+++ A A E
Sbjct: 36 SLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAIEK 95
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF PI GK RIM+S RDPS+RK G GN+FIKNL IDNKAL DTF+ FG +LS KVA
Sbjct: 96 LNFTPIKGKLCRIMWSQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNILSSKVA 155
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSPKF 206
D G+SKG+G+V FE +E+A AI LNGML+N +++YVG + ++ER + + F
Sbjct: 156 TDETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYVGPHLSKKERESKFEEMKANF 215
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVY+ N+ TD++ +++ FG S ++ + +G+++ FGFVNF + + A VE+
Sbjct: 216 TNVYIKNINTETTDKEFEELVAKFGKTDSVVLERTPEGENKGFGFVNFVNHEDAVKCVEE 275
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
LN T + YV RAQK+ ER+ +L+ ++E R+ + K +G NL++KNLDDSI+D+KL
Sbjct: 276 LNNTEFKGQPLYVNRAQKKYERQQELKKQYEATRMEKMAKYQGINLFIKNLDDSIDDKKL 335
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
+E F+ +GTITS KVM ++G SKG GF FS PEEAT+A+ E N +++ KPLYVA+AQ
Sbjct: 336 EEEFAPYGTITSAKVMTTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 395
Query: 387 RKEERKARLQAQ 398
RK+ R+++L Q
Sbjct: 396 RKDVRRSQLAQQ 407
>gi|46128087|ref|XP_388597.1| hypothetical protein FG08421.1 [Gibberella zeae PH-1]
Length = 784
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 258/669 (38%), Positives = 353/669 (52%), Gaps = 95/669 (14%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD R SLGYAYVNY+ D A
Sbjct: 58 SASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATPDGEKAL 117
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLD +IDNKAL DTFAAFG +LSCK
Sbjct: 118 EELNYTIIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 177
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA D G SKGYGFV +E +EAA AIK +NGML+N+K+VYVG + +++R + +
Sbjct: 178 VAQDETGASKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 237
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTNVYV N+A VT++D +++F +G +TS+ + +D +GKSR FGFVNF + ++A+ AV
Sbjct: 238 NFTNVYVKNIAADVTEDDFRQLFEKYGDVTSSSLARDQEGKSRGFGFVNFTTHESASKAV 297
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE--------------------------- 297
++LN + + YVGRAQK+ ERE +LR +E
Sbjct: 298 DELNNKDFHGQDLYVGRAQKKHEREEELRKSYEAARRGEGQQMNKECGSITSTKVMRETP 357
Query: 298 ----QERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSG 353
+E+ + E +K +K+ E+ K+ E G K G
Sbjct: 358 TEVVEEKKEKAETVKENQEEVKDEVKEEPKEESKDETKE-GEEDKKAEKKSDKKLGKSKG 416
Query: 354 FA--AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFA---QIRAPGGM 408
F FS P++AT+A+ EMN +M KPLYVA+AQRK+ RK++L+A QIR +
Sbjct: 417 FGFVCFSNPDDATKAVAEMNQRMFNGKPLYVALAQRKDVRKSQLEASIQARNQIRMQQAV 476
Query: 409 SPLASGIPGYHHGAPRLGPQQLYYGQG-TPGLMPPQAAGYGFQQ------QVFPGLRP-- 459
+ +G+P + P +Y+ G PG MP G F Q Q PG P
Sbjct: 477 A--HAGMPQQYMQPP------VYFAPGQQPGFMPQGGRGVPFPQGGMGMPQGRPGQFPYP 528
Query: 460 -----GGPNYIMP---YHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLD--N 509
GG MP Y + Q PG Q PQFM L
Sbjct: 529 QQGGRGGVPQQMPPNMYGMPGQFPPG----------YGQPGTPQFMAAMQAQQAALGGRG 578
Query: 510 ARNGTDQSVVSMVPVPFEVSGMPATPVETPRPV-------------------PVPISTLT 550
A G M +P MP P R +S+L
Sbjct: 579 APQGGRGGPQGMPGMPPMAGNMPGFPPNNNRQGGRGGPGRNGNGPQGGRGADAAGLSSLQ 638
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
LASA P + ++LGE ++P ++ I A K+TGMLLEM+ E+++LIE ALK KV
Sbjct: 639 QQLASAPPPQQKQILGELIFPKIQAINADLAGKITGMLLEMENPELVNLIEDESALKAKV 698
Query: 611 AEAMAVLQE 619
EA+AV E
Sbjct: 699 DEALAVYDE 707
>gi|299473651|emb|CBN78045.1| poly(A) binding protein [Ectocarpus siliculosus]
Length = 688
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/476 (45%), Positives = 294/476 (61%), Gaps = 42/476 (8%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y + SLYVGDL ++V E+ L+++FSQV V S+RVCRD R SLGYAYVN+ N DA
Sbjct: 39 YHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAER 98
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I + RIM+S RDPS+R+SG GN+F+KNLD ++DNKAL DTF+ FG +LS
Sbjct: 99 ALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILS 158
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA D G+SKGYG+V +E +A AI +NGMLI KQV+VG FVRR RA Q
Sbjct: 159 CKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQ---A 215
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVM---KDSDGK------------SRCF 249
+TN+YV L + D L++ F G +TS V ++ G SR F
Sbjct: 216 DWTNLYVKGLPSSWDDAKLREEFEKHGAVTSCKVQVAPQEGQGDESKEKGKGGEGKSRGF 275
Query: 250 GFVNFQSPDAAAAAVEKLNGTTNND----KVWYVGRAQKRAEREADLRAKFEQERISRYE 305
GFVNF+ ++A A+E LN D Y RAQK++ER +L++K +Q ++ R
Sbjct: 276 GFVNFEEHESAVKAIEALNNAEMPDGEGTTTLYCARAQKKSERARELQSKHDQVKMERMN 335
Query: 306 KLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD--QHGFSKGSGFAAFSMPEEA 363
K +G N+Y+KNLD+ + ++ ++E F+ +GTITS +VMVD + SKG GF FS PEEA
Sbjct: 336 KFQGVNVYVKNLDEGVTEDAMREAFAPYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEA 395
Query: 364 TRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRA---PGGMSPLASGIPGYHH 420
T+A+ EMNGKM+ KP+YVA+AQR+E R+ +L+AQFAQ P GM P+A G G +
Sbjct: 396 TKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPPRGM-PMAPGAQGM-Y 453
Query: 421 GAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHP 476
G P Y+ PG MP Q +Q + P + P GP MP + R +P
Sbjct: 454 GMP-------YWMGAQPG-MPQQP-----RQFMMPQMMPRGPRGPMPAYGGRGNYP 496
>gi|301764847|ref|XP_002917846.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Ailuropoda melanoleuca]
Length = 492
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/389 (50%), Positives = 262/389 (67%), Gaps = 4/389 (1%)
Query: 6 AAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSK 65
AA V + V + Y SLYVGDL +V E L+ FS V V+S+R+CRD
Sbjct: 87 AARDRLTVGRSKEMNVEAKYRQASLYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVT 146
Query: 66 RSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDT 125
R SLGYAYVN+ DA A + +NF I GKPIR+M+S RD +RKSG GNVFIKNLD
Sbjct: 147 RRSLGYAYVNFLKLADAQKALDTMNFDMIKGKPIRLMWSQRDAYLRKSGIGNVFIKNLDK 206
Query: 126 SIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQ 185
SIDNK L + F+AFG +LS KV D G S+GY FV F+N+ AA AI+ +NG L+ D +
Sbjct: 207 SIDNKTLYEHFSAFGKILSSKVMSDDQG-SRGYAFVHFQNQNAADRAIEEMNGALLKDCR 265
Query: 186 VYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
++VG F R++R QN +FTNVYV N + + DE LK++F +G S VM DS
Sbjct: 266 LFVGRFKNRKDREAELQNKVNEFTNVYVKNFGDDMDDERLKEVFSKYGKTLSVKVMTDSG 325
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
GKS+ FGFV+F S +AA AVE++NG N ++ +VGRAQK++ER+A+L+ FEQ + R
Sbjct: 326 GKSKGFGFVSFDSHEAAKKAVEEMNGKDVNGQLLFVGRAQKKSERQAELKQMFEQLKQER 385
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEA 363
+ + +G LY+KNLDD+I+DEKL FS FG+I+ K+M ++ G SKG G FS PEEA
Sbjct: 386 FRRCQGMKLYIKNLDDTIDDEKLWREFSSFGSISRVKIMREE-GRSKGFGLICFSSPEEA 444
Query: 364 TRALNEMNGKMIGRKPLYVAVAQRKEERK 392
T+A+ EMNG+++G KPLY+A+AQR ERK
Sbjct: 445 TKAMAEMNGRILGSKPLYIALAQRPXERK 473
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 166/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L F+A G VLS ++ D +S GY +V F AQ A+
Sbjct: 110 SLYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQKALDT 169
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + ++ +R +++ NV++ NL +++ ++ L + F FG I S
Sbjct: 170 MNFDMIKGKPIRL-MWSQRDAYLRKS---GIGNVFIKNLDKSIDNKTLYEHFSAFGKILS 225
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ VM D G SR + FV+FQ+ +AA A+E++NG D +VGR + R +REA+L
Sbjct: 226 SKVMSDDQG-SRGYAFVHFQNQNAADRAIEEMNGALLKDCRLFVGRFKNRKDREAEL--- 281
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
Q +++ + N+Y+KN D ++DE+LKE+FS++G S KVM D G SKG GF
Sbjct: 282 --QNKVNEF-----TNVYVKNFGDDMDDERLKEVFSKYGKTLSVKVMTDSGGKSKGFGFV 334
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+F E A +A+ EMNGK + + L+V AQ+K ER+A L+ F Q++
Sbjct: 335 SFDSHEAAKKAVEEMNGKDVNGQLLFVGRAQKKSERQAELKQMFEQLK 382
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 28/205 (13%)
Query: 199 QQNVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-SDGKSRCFGFVNFQ 255
+ NV K+ ++YV +L+ VT++ L K F G + S + +D +S + +VNF
Sbjct: 99 EMNVEAKYRQASLYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFL 158
Query: 256 SPDAAAAAVEKLNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGAN 311
A A++ +N K +W ++R+A LR K N
Sbjct: 159 KLADAQKALDTMNFDMIKGKPIRLMW--------SQRDAYLR------------KSGIGN 198
Query: 312 LYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMN 371
+++KNLD SI+++ L E FS FG I S KVM D G S+G F F A RA+ EMN
Sbjct: 199 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG-SRGYAFVHFQNQNAADRAIEEMN 257
Query: 372 GKMIGRKPLYVAVAQRKEERKARLQ 396
G ++ L+V + +++R+A LQ
Sbjct: 258 GALLKDCRLFVGRFKNRKDREAELQ 282
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
+ LY+ +L+ +++ +L+ FS + V++ R++ + S G+ + +S+P++A A
Sbjct: 392 MKLYIKNLDDTIDDEKLWREFSSFGSISRVKIMREEGR--SKGFGLICFSSPEEATKAMA 449
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKS 113
+N + KP+ I + R P RK+
Sbjct: 450 EMNGRILGSKPLYIALAQR-PXERKN 474
>gi|356548313|ref|XP_003542547.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 495
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/488 (44%), Positives = 290/488 (59%), Gaps = 32/488 (6%)
Query: 16 ATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVN 75
AT AAVP+ S+YVGDL +V E L+ F + + SVRVCRD+ +SL Y YVN
Sbjct: 5 ATVAAVPA-----SIYVGDLHPDVQEHHLFAAFVEFGSIASVRVCRDRVTMNSLCYGYVN 59
Query: 76 YSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDT 135
+ + QDA A + N +NGK IR+M+ HRDP+ RKSG GNVF+KNL SIDN L D
Sbjct: 60 FRSQQDAIRAIKLRNNSYLNGKVIRVMWLHRDPNARKSGRGNVFVKNLAGSIDNAGLHDL 119
Query: 136 FAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ 195
F +G +LS KV + +G+SKGYGFVQFE EE+A NAI+ LNG + +KQ+YVG FVR+
Sbjct: 120 FKKYGNILSSKVVMSEDGKSKGYGFVQFEWEESANNAIEKLNGSTVGNKQIYVGKFVRKG 179
Query: 196 ERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQ 255
+R K+TN+Y+ NL +T+ L++ F FG I S + KD +G S+ F FVN++
Sbjct: 180 DRILPGYDAKYTNLYIKNLDSDITEALLQEKFSSFGKIISLAISKDDNGLSKGFAFVNYE 239
Query: 256 SPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLK 315
+PD A A+E +NG K YV RAQK+AERE L +FE++R + K + +NLY+K
Sbjct: 240 NPDDAKKAMEAMNGLQFGSKYLYVARAQKKAEREQILHRQFEEKRKEQILKYQASNLYVK 299
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI 375
N+DD + D++L++LFS GTITS KVM D G SKG GF FS PEEA +A+ NG
Sbjct: 300 NIDDDVTDKELRDLFSSCGTITSVKVMRDDKGISKGFGFVCFSNPEEANKAVMSFNGCTF 359
Query: 376 GRKPLYVAVAQRKEERKARLQAQFA--QIRAPGGMSP-LASGIPGY-HHGAPRL------ 425
RKPLY+A+AQRK+ERK +L +A Q G +P + G+P Y +H L
Sbjct: 360 HRKPLYIAIAQRKKERKTQLNLHYAPQQAGLDGSSTPVIPGGVPPYFYHSVASLMFQSGL 419
Query: 426 --GPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVR 483
P L G +PP + FQ P + PN+ H Q G R
Sbjct: 420 LYQPLGLRSGWRANDFVPPARS---FQHSQVPIV----PNFTR--------HQRQNRGSR 464
Query: 484 RSGNTHQM 491
+GN + +
Sbjct: 465 MNGNLNSL 472
>gi|318087106|gb|ADV40145.1| putative apoptosis-promoting RNA-binding protein TIA-1/TIAR
[Latrodectus hesperus]
Length = 332
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/329 (56%), Positives = 238/329 (72%), Gaps = 2/329 (0%)
Query: 39 VNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKP 98
V E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA A + +NF + G+P
Sbjct: 4 VTEAMLFEKFSSAGPVLSIRVCRDLIARRSLGYAYVNFQQPVDAERALDTMNFDMVKGRP 63
Query: 99 IRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGY 158
IRIM+S RDPS+RKSG GNVFIKNLD SIDNKA+ DTF+AFG +LSCKVA D SKGY
Sbjct: 64 IRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGNILSCKVATDEESNSKGY 123
Query: 159 GFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAE 216
GFV FE EEAA NAI+ +NGML+N ++V+VG FV R ER +Q + +F NVY+ N +
Sbjct: 124 GFVHFETEEAANNAIQKVNGMLLNGRKVFVGKFVPRSEREKQLGQKARRFMNVYIKNFGD 183
Query: 217 TVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKV 276
+ DE L+++F +G ITSA VM D GK + FGFV+F+ P+ A AV LN N KV
Sbjct: 184 DLDDEKLREMFEKYGKITSAKVMADETGKPKGFGFVSFEDPENAEKAVNDLNNKELNGKV 243
Query: 277 WYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTI 336
YVGRAQK++ER A+L+ +FEQ ++ R + +G NLY+KNLDDSI+DE+L++ F+ FGTI
Sbjct: 244 LYVGRAQKKSERAAELKRRFEQLKMDRINRYQGVNLYVKNLDDSIDDERLRKEFTPFGTI 303
Query: 337 TSCKVMVDQHGFSKGSGFAAFSMPEEATR 365
TS KVM D +G SKG GF FS PEEAT+
Sbjct: 304 TSAKVMTDSNGRSKGFGFVCFSAPEEATK 332
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 157/280 (56%), Gaps = 15/280 (5%)
Query: 125 TSIDNKALCDTFAAFGTVLSCKVAIDSNGQ-SKGYGFVQFENEEAAQNAIKMLNGMLIND 183
T + L + F++ G VLS +V D + S GY +V F+ A+ A+ +N ++
Sbjct: 2 TRVTEAMLFEKFSSAGPVLSIRVCRDLIARRSLGYAYVNFQQPVDAERALDTMNFDMVKG 61
Query: 184 KQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
+ + + R + V NV++ NL +++ ++ + F FG I S V D +
Sbjct: 62 RPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKAMYDTFSAFGNILSCKVATDEE 117
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
S+ +GFV+F++ +AA A++K+NG N + +VG+ R+ERE L ++ R
Sbjct: 118 SNSKGYGFVHFETEEAANNAIQKVNGMLLNGRKVFVGKFVPRSEREKQL-----GQKARR 172
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEA 363
+ N+Y+KN D ++DEKL+E+F ++G ITS KVM D+ G KG GF +F PE A
Sbjct: 173 F-----MNVYIKNFGDDLDDEKLREMFEKYGKITSAKVMADETGKPKGFGFVSFEDPENA 227
Query: 364 TRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+A+N++N K + K LYV AQ+K ER A L+ +F Q++
Sbjct: 228 EKAVNDLNNKELNGKVLYVGRAQKKSERAAELKRRFEQLK 267
>gi|358372137|dbj|GAA88742.1| polyadenylate-binding protein [Aspergillus kawachii IFO 4308]
Length = 763
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/335 (54%), Positives = 242/335 (72%), Gaps = 2/335 (0%)
Query: 12 AVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGY 71
AV ++T A+ + + SLYVG+L+ +V E+ LY+LFS + QV S+RVCRD R SLGY
Sbjct: 36 AVENSTPASAANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGY 95
Query: 72 AYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
AYVNY+N D A E LN+ I GKP RIM+S RDP++RK+G GNVFIKNLD++IDNKA
Sbjct: 96 AYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKA 155
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+NDK+V+VG
Sbjct: 156 LHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHH 215
Query: 192 VRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCF 249
+ +++R + + FTNVY+ NL + D++ +K+F FG ITSA + +D +GKSR F
Sbjct: 216 ISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGF 275
Query: 250 GFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKG 309
GFVNF + ++A AAVE++N + YVGRAQK+ ERE +LR ++E R+ + K +G
Sbjct: 276 GFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQG 335
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
NLY+KNL D I+DEKL+ELF +GTITS KVM D
Sbjct: 336 VNLYVKNLTDDIDDEKLRELFGPYGTITSAKVMRD 370
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 202/654 (30%), Positives = 313/654 (47%), Gaps = 116/654 (17%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D+ S GY +V+Y + A
Sbjct: 137 TGQGNV--FIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSK-GYGFVHYETAEAA 193
Query: 83 ANAKEALNFMPINGKPIRIMY--SHRDPSIR----KSGYGNVFIKNLDTSIDNKALCDTF 136
NA + +N M +N K + + + S +D + K+ + NV+IKNLD+ ID+ F
Sbjct: 194 NNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMF 253
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG + S ++ D G+S+G+GFV F E+AQ A++ +N I +++YVG ++ E
Sbjct: 254 EKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHE 313
Query: 197 RAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG 244
R ++ + K+ N+YV NL + + DE L+++FG +GTITSA VM+D++
Sbjct: 314 REEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEKLRELFGPYGTITSAKVMRDTNV 373
Query: 245 KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRY 304
+ SP++A +K A +E D A E E+
Sbjct: 374 ERES-------SPESAGK--------------------EKEANKENDKEATPEAEKAEEK 406
Query: 305 EKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEAT 364
+ K A ++EK KE + K G SKG GF FS P+EA+
Sbjct: 407 AEEKPA---------ESSEEKDKE---------AKKSDKKPFGKSKGFGFVCFSSPDEAS 448
Query: 365 RALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQF-AQIRAPGGMSPLASGIPGYHHGAP 423
+A+ EMN +M+ KPLYVA+AQRK+ R+++L+A A+ + A+G+P P
Sbjct: 449 KAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEASIQARNTIRQQQAAAAAGMP-----QP 503
Query: 424 RLGPQQLYYGQGTPGLMPPQAAGYGFQQQV-----FPGLRPG---------------GPN 463
+ P ++YG G G +P G F Q PG RPG GPN
Sbjct: 504 YMQPA-VFYGPGQQGFIPGGQRGMAFPPQPGMVMGIPGGRPGQYPGPFPGQQGGRGMGPN 562
Query: 464 YIMPYHLQRQVHPG-QRTGVRRSGNTH-QMQQPQFMRNSN-----QGIRYLDNARNGTDQ 516
+P + + + G Q G +G + QM Q QF R + G+ R G
Sbjct: 563 QQIPPNFAQGIPMGMQGPGAIPNGMGYPQMAQVQFGRGAGGRGQVPGMPMGQGMRGGPGY 622
Query: 517 SVVSMVPVP-----------FEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRML 565
VPV + + PA P E L +A P + +ML
Sbjct: 623 GQGRGVPVQQGQIRPGQGGRGQNAAAPAGPQEG-----AAGGVNAQTLGAAPPAQQKQML 677
Query: 566 GEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
GE LYP ++ +P A K+TGMLLEMD TE+L L+E EAL+ KV EA++V E
Sbjct: 678 GEALYPKIQAQQPELAGKITGMLLEMDNTELLSLLEDEEALRAKVDEALSVYDE 731
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 158/290 (54%), Gaps = 19/290 (6%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ LD S+ L + F++ G V S +V D+ +S GY +V + N + A++
Sbjct: 53 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 112
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN LI K + ++ +R ++ NV++ NL + ++ L F FG I S
Sbjct: 113 LNYTLIKGKPCRI-MWSQRDPALRKTGQ---GNVFIKNLDSAIDNKALHDTFAAFGNILS 168
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V +D G S+ +GFV++++ +AA A++ +NG NDK +VG + +R+
Sbjct: 169 CKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQ------ 222
Query: 296 FEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSG 353
S++E++K N+Y+KNLD I+D++ +++F +FG ITS + DQ G S+G G
Sbjct: 223 ------SKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGFG 276
Query: 354 FAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
F FS E A A+ EMN K I + LYV AQ+K ER+ L+ Q+ R
Sbjct: 277 FVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAAR 326
>gi|410956870|ref|XP_003985059.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Felis catus]
Length = 486
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/384 (50%), Positives = 262/384 (68%), Gaps = 4/384 (1%)
Query: 12 AVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGY 71
AV + V + Y SLYVGDL +V E L+ FS V V+S+R+CRD R SLGY
Sbjct: 93 AVGRSKEMNVAAKYRQASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGY 152
Query: 72 AYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
AYVN+ DA A + +NF I GKPIR+M+S RD +RKSG GNVFIKNLD SIDNK
Sbjct: 153 AYVNFLKLADAQRALDTMNFDTIKGKPIRLMWSQRDAYLRKSGIGNVFIKNLDRSIDNKT 212
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L + F+AFG +LS KV D G S+GY FV F+N+ AA AI+ +NG L+ D +++VG F
Sbjct: 213 LYEHFSAFGKILSSKVMSDDQG-SRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRF 271
Query: 192 VRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCF 249
R++R + N + +FTNVY+ N + + DE LK++F +G S VM DS GKS+ F
Sbjct: 272 KNRKDREAELRNKANEFTNVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMTDSSGKSKGF 331
Query: 250 GFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKG 309
GFV+F S +AA AVE++NG N ++ +VGRAQK++ER+A+L+ FEQ + R+ + +G
Sbjct: 332 GFVSFDSHEAAKKAVEEMNGKDINGQLLFVGRAQKKSERQAELKQVFEQLKQERFRRCQG 391
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNE 369
LY+KNLDD+I+DEKL FS FG+I+ K+M ++ G SKG G FS PEEAT+A+ E
Sbjct: 392 MKLYIKNLDDTIDDEKLWREFSSFGSISRVKIMREE-GRSKGFGLICFSSPEEATKAMAE 450
Query: 370 MNGKMIGRKPLYVAVAQRKEERKA 393
MNG+++G KPLY+A+AQ+ ER A
Sbjct: 451 MNGRILGSKPLYIALAQKPXERNA 474
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 160/288 (55%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L F+ G VLS ++ D +S GY +V F AQ A+
Sbjct: 110 SLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQRALDT 169
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N I K + + ++ +R +++ NV++ NL ++ ++ L + F FG I S
Sbjct: 170 MNFDTIKGKPIRL-MWSQRDAYLRKS---GIGNVFIKNLDRSIDNKTLYEHFSAFGKILS 225
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ VM D G SR + FV+FQ+ AA A+E++NG D +VGR + R +REA+LR K
Sbjct: 226 SKVMSDDQG-SRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKNRKDREAELRNK 284
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ N+Y+KN D ++DE+LKE+FS++G S KVM D G SKG GF
Sbjct: 285 ANE----------FTNVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMTDSSGKSKGFGFV 334
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+F E A +A+ EMNGK I + L+V AQ+K ER+A L+ F Q++
Sbjct: 335 SFDSHEAAKKAVEEMNGKDINGQLLFVGRAQKKSERQAELKQVFEQLK 382
>gi|169771151|ref|XP_001820045.1| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
oryzae RIB40]
gi|317144326|ref|XP_003189588.1| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
oryzae RIB40]
gi|121923334|sp|Q2UK72.1|PABP_ASPOR RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|83767904|dbj|BAE58043.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391872693|gb|EIT81794.1| polyadenylate-binding protein [Aspergillus oryzae 3.042]
Length = 765
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/341 (53%), Positives = 243/341 (71%), Gaps = 2/341 (0%)
Query: 6 AAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSK 65
A A +TTA S + SLYVG+L+ +V E+ LY+LFS + QV S+RVCRD
Sbjct: 27 APAPEVTAVESTTAPNASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVT 86
Query: 66 RSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDT 125
R SLGYAYVNY+N D A E LN+ I GKP RIM+S RDP++RK+G GNVFIKNLD+
Sbjct: 87 RRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDS 146
Query: 126 SIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQ 185
+IDNKAL DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+NDK+
Sbjct: 147 AIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKK 206
Query: 186 VYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
V+VG + +++R + + FTNVY+ N+ + VT+E+ +++F FG ITSA + +D +
Sbjct: 207 VFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQE 266
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
GKSR FGFVNF + ++A AAV+++N + YVGRAQK+ ERE +LR ++E R+ +
Sbjct: 267 GKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREEELRKQYEAARLEK 326
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
K +G NLY+KNL D ++DEKL+ELF +GTITS KVM D
Sbjct: 327 ASKYQGVNLYVKNLTDDVDDEKLRELFGPYGTITSAKVMRD 367
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 158/290 (54%), Gaps = 19/290 (6%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ LD S+ L + F++ G V S +V D+ +S GY +V + N + A++
Sbjct: 50 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 109
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN LI K + ++ +R ++ NV++ NL + ++ L F FG I S
Sbjct: 110 LNYTLIKGKPCRI-MWSQRDPALRKTGQ---GNVFIKNLDSAIDNKALHDTFAAFGNILS 165
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V +D G S+ +GFV++++ +AA A++ +NG NDK +VG + +R+
Sbjct: 166 CKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQ------ 219
Query: 296 FEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSG 353
S++E++K N+Y+KN+D + +E+ +ELF +FG ITS + DQ G S+G G
Sbjct: 220 ------SKFEEMKANFTNVYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQEGKSRGFG 273
Query: 354 FAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
F FS E A A++EMN K I + LYV AQ+K ER+ L+ Q+ R
Sbjct: 274 FVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREEELRKQYEAAR 323
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 135/239 (56%), Gaps = 21/239 (8%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D+ S GY +V+Y + A
Sbjct: 134 TGQGNV--FIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSK-GYGFVHYETAEAA 190
Query: 83 ANAKEALNFMPINGKPIRIMY--SHRDPSIR----KSGYGNVFIKNLDTSIDNKALCDTF 136
NA + +N M +N K + + + S +D + K+ + NV+IKN+D + + + F
Sbjct: 191 NNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQDVTEEEFRELF 250
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG + S ++ D G+S+G+GFV F E+AQ A+ +N I +++YVG ++ E
Sbjct: 251 EKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHE 310
Query: 197 RAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
R ++ + K+ N+YV NL + V DE L+++FG +GTITSA VM+D++
Sbjct: 311 REEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFGPYGTITSAKVMRDTN 369
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 151/311 (48%), Gaps = 45/311 (14%)
Query: 347 GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQF-AQIRAP 405
G SKG GF FS P+EA++A+ EMN +M+ KPLYVA+AQRK+ R+++L+A A+
Sbjct: 430 GKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEASIQARNTIR 489
Query: 406 GGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQV------FPGLRP 459
+ A+G+P P + P ++YG G G +P Q G F Q PG RP
Sbjct: 490 QQQAAAAAGMP-----QPYMQPA-VFYGPGQQGFIPGQRGGIAFPPQPGMVMAGIPGGRP 543
Query: 460 G---------------GPNYIMPYHLQRQVHPGQRTGVRRSGNTHQ--MQQPQF------ 496
G GPN +P + Q + G G +G + M Q QF
Sbjct: 544 GQYPGPFPGQQGGRGMGPNQQLPPNFQ-GIPMGAMQGPVPNGMGYPQGMAQVQFGRGAGG 602
Query: 497 ------MRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVS-GMPATPVETPRPVPVPISTL 549
M N QG+R + V P + G A RP L
Sbjct: 603 RGQVPGMPNMGQGMRGPGYGQGRGGVPVQQGQMRPGQGGRGQNAAQAPAGRPEEAVAGGL 662
Query: 550 TS-ALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
T+ AL++A P + +MLGE LYP ++ +P A K+TGMLLEM+ TE+L L+E EAL+
Sbjct: 663 TAQALSAAPPPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMENTELLSLLEDEEALRA 722
Query: 609 KVAEAMAVLQE 619
KV EA+ V E
Sbjct: 723 KVDEALNVYDE 733
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
GKS+ FGFV F SPD A+ AV ++N N K YV AQ++ R + L A +
Sbjct: 430 GKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEASIQ 483
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 153 GQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
G+SKG+GFV F + + A A+ +N ++N K +YV L R+ R Q
Sbjct: 430 GKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQ 477
>gi|158512764|sp|A2Q848.1|PABP_ASPNC RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|134054831|emb|CAK43671.1| unnamed protein product [Aspergillus niger]
Length = 731
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/335 (54%), Positives = 241/335 (71%), Gaps = 2/335 (0%)
Query: 12 AVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGY 71
AV ++T A + + SLYVG+L+ +V E+ LY+LFS + QV S+RVCRD R SLGY
Sbjct: 38 AVENSTPAPAANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGY 97
Query: 72 AYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
AYVNY+N D A E LN+ I GKP RIM+S RDP++RK+G GNVFIKNLD++IDNKA
Sbjct: 98 AYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKA 157
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+NDK+V+VG
Sbjct: 158 LHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHH 217
Query: 192 VRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCF 249
+ +++R + + FTNVY+ NL + D++ +K+F FG ITSA + +D +GKSR F
Sbjct: 218 ISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGF 277
Query: 250 GFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKG 309
GFVNF + ++A AAVE++N + YVGRAQK+ ERE +LR ++E R+ + K +G
Sbjct: 278 GFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQG 337
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
NLY+KNL D I+DEKL+ELF +GTITS KVM D
Sbjct: 338 VNLYVKNLTDDIDDEKLRELFGPYGTITSAKVMRD 372
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 191/643 (29%), Positives = 303/643 (47%), Gaps = 117/643 (18%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D+ S GY +V+Y + A
Sbjct: 139 TGQGNV--FIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSK-GYGFVHYETAEAA 195
Query: 83 ANAKEALNFMPINGKPIRIMY--SHRDPSIR----KSGYGNVFIKNLDTSIDNKALCDTF 136
NA + +N M +N K + + + S +D + K+ + NV+IKNLD+ ID+ F
Sbjct: 196 NNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMF 255
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG + S ++ D G+S+G+GFV F E+AQ A++ +N I +++YVG ++ E
Sbjct: 256 EKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHE 315
Query: 197 RAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG 244
R ++ + K+ N+YV NL + + DE L+++FG +GTITSA VM+D++
Sbjct: 316 REEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEKLRELFGPYGTITSAKVMRDTNV 375
Query: 245 KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRY 304
+ QSPD+A +K A++E D A E E+ +
Sbjct: 376 ERD-------QSPDSAGK--------------------EKEADKENDKEATPEAEKAEKA 408
Query: 305 EKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEAT 364
E+ + K+ + +D+K G SKG GF FS P+EA+
Sbjct: 409 EEKPSESSEEKDKEAKKSDKK-------------------PFGKSKGFGFVCFSSPDEAS 449
Query: 365 RALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQF-AQIRAPGGMSPLASGIPGYHHGAP 423
+A+ EMN +M+ KPLYVA+AQRK+ R+++L+A A+ + A+G+P P
Sbjct: 450 KAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEASIQARNTIRQQQAAAAAGMP-----QP 504
Query: 424 RLGPQQLYYGQGTPGLMPPQAAGYGFQQQV-----FPGLRPG---------------GPN 463
+ P ++YG G G +P G F Q PG RPG GPN
Sbjct: 505 YMQP-AVFYGPGQQGFIPGGQRGMAFPPQPGMVMGIPGGRPGQYPGPFPGQQGGRGMGPN 563
Query: 464 YIMPYHLQRQVHPGQR--TGVRRSGNTHQMQQPQFMRNS-----------NQGIRYLDNA 510
+P + + + G + G+ QM Q QF R + QG+R
Sbjct: 564 QQIPPNFAQGIPMGMQGPGGIPNGMGYPQMAQVQFGRGAGGRGQVPGMPMGQGMRGGPGY 623
Query: 511 RNGTDQSVVSMVPVPFEV-----SGMPATPVETPRPVPVPISTLTSALASASPDDRTRML 565
G V P + + PA P E L +A P + +ML
Sbjct: 624 GQGRGAPVQQGQMRPGQGGRGQNAAAPAGPQEG-----AAGGVNAQTLGAAPPAQQKQML 678
Query: 566 GEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
GE LYP ++ +P A K+TGMLLEMD TE+L L P A ++
Sbjct: 679 GEALYPKIQAQQPELAGKITGMLLEMDNTELLSLTRKPCAPRS 721
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 161/299 (53%), Gaps = 19/299 (6%)
Query: 108 PSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENE 166
P+ + ++++ LD S+ L + F++ G V S +V D+ +S GY +V + N
Sbjct: 46 PAANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 105
Query: 167 EAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKI 226
+ A++ LN LI K + ++ +R ++ NV++ NL + ++ L
Sbjct: 106 ADGERALEDLNYTLIKGKPCRI-MWSQRDPALRKTGQ---GNVFIKNLDSAIDNKALHDT 161
Query: 227 FGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRA 286
F FG I S V +D G S+ +GFV++++ +AA A++ +NG NDK +VG +
Sbjct: 162 FAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKK 221
Query: 287 EREADLRAKFEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
+R+ S++E++K N+Y+KNLD I+D++ +++F +FG ITS + D
Sbjct: 222 DRQ------------SKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRD 269
Query: 345 QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
Q G S+G GF FS E A A+ EMN K I + LYV AQ+K ER+ L+ Q+ R
Sbjct: 270 QEGKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAAR 328
>gi|317025248|ref|XP_001388739.2| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
niger CBS 513.88]
gi|350637942|gb|EHA26298.1| hypothetical protein ASPNIDRAFT_46760 [Aspergillus niger ATCC 1015]
Length = 764
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/335 (54%), Positives = 241/335 (71%), Gaps = 2/335 (0%)
Query: 12 AVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGY 71
AV ++T A + + SLYVG+L+ +V E+ LY+LFS + QV S+RVCRD R SLGY
Sbjct: 38 AVENSTPAPAANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGY 97
Query: 72 AYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
AYVNY+N D A E LN+ I GKP RIM+S RDP++RK+G GNVFIKNLD++IDNKA
Sbjct: 98 AYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKA 157
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+NDK+V+VG
Sbjct: 158 LHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHH 217
Query: 192 VRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCF 249
+ +++R + + FTNVY+ NL + D++ +K+F FG ITSA + +D +GKSR F
Sbjct: 218 ISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGF 277
Query: 250 GFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKG 309
GFVNF + ++A AAVE++N + YVGRAQK+ ERE +LR ++E R+ + K +G
Sbjct: 278 GFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQG 337
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
NLY+KNL D I+DEKL+ELF +GTITS KVM D
Sbjct: 338 VNLYVKNLTDDIDDEKLRELFGPYGTITSAKVMRD 372
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 199/654 (30%), Positives = 312/654 (47%), Gaps = 117/654 (17%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D+ S GY +V+Y + A
Sbjct: 139 TGQGNV--FIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSK-GYGFVHYETAEAA 195
Query: 83 ANAKEALNFMPINGKPIRIMY--SHRDPSIR----KSGYGNVFIKNLDTSIDNKALCDTF 136
NA + +N M +N K + + + S +D + K+ + NV+IKNLD+ ID+ F
Sbjct: 196 NNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMF 255
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG + S ++ D G+S+G+GFV F E+AQ A++ +N I +++YVG ++ E
Sbjct: 256 EKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHE 315
Query: 197 RAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG 244
R ++ + K+ N+YV NL + + DE L+++FG +GTITSA VM+D++
Sbjct: 316 REEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEKLRELFGPYGTITSAKVMRDTN- 374
Query: 245 KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRY 304
QSPD+A +K A++E D A E E+ +
Sbjct: 375 ------VERDQSPDSAGK--------------------EKEADKENDKEATPEAEKAEKA 408
Query: 305 EKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEAT 364
E+ + K+ + +D+K G SKG GF FS P+EA+
Sbjct: 409 EEKPSESSEEKDKEAKKSDKK-------------------PFGKSKGFGFVCFSSPDEAS 449
Query: 365 RALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQF-AQIRAPGGMSPLASGIPGYHHGAP 423
+A+ EMN +M+ KPLYVA+AQRK+ R+++L+A A+ + A+G+P P
Sbjct: 450 KAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEASIQARNTIRQQQAAAAAGMP-----QP 504
Query: 424 RLGPQQLYYGQGTPGLMPPQAAGYGFQQQV-----FPGLRPG---------------GPN 463
+ P ++YG G G +P G F Q PG RPG GPN
Sbjct: 505 YMQP-AVFYGPGQQGFIPGGQRGMAFPPQPGMVMGIPGGRPGQYPGPFPGQQGGRGMGPN 563
Query: 464 YIMPYHLQRQVHPGQR--TGVRRSGNTHQMQQPQFMRNS-----------NQGIRYLDNA 510
+P + + + G + G+ QM Q QF R + QG+R
Sbjct: 564 QQIPPNFAQGIPMGMQGPGGIPNGMGYPQMAQVQFGRGAGGRGQVPGMPMGQGMRGGPGY 623
Query: 511 RNGTDQSVVSMVPVPFEV-----SGMPATPVETPRPVPVPISTLTSALASASPDDRTRML 565
G V P + + PA P E L +A P + +ML
Sbjct: 624 GQGRGAPVQQGQMRPGQGGRGQNAAAPAGPQEG-----AAGGVNAQTLGAAPPAQQKQML 678
Query: 566 GEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
GE LYP ++ +P A K+TGMLLEMD TE+L L+E EAL+ KV EA++V E
Sbjct: 679 GEALYPKIQAQQPELAGKITGMLLEMDNTELLSLLEDEEALRAKVDEALSVYDE 732
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 161/299 (53%), Gaps = 19/299 (6%)
Query: 108 PSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENE 166
P+ + ++++ LD S+ L + F++ G V S +V D+ +S GY +V + N
Sbjct: 46 PAANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 105
Query: 167 EAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKI 226
+ A++ LN LI K + ++ +R ++ NV++ NL + ++ L
Sbjct: 106 ADGERALEDLNYTLIKGKPCRI-MWSQRDPALRKTGQ---GNVFIKNLDSAIDNKALHDT 161
Query: 227 FGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRA 286
F FG I S V +D G S+ +GFV++++ +AA A++ +NG NDK +VG +
Sbjct: 162 FAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKK 221
Query: 287 EREADLRAKFEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
+R+ S++E++K N+Y+KNLD I+D++ +++F +FG ITS + D
Sbjct: 222 DRQ------------SKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRD 269
Query: 345 QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
Q G S+G GF FS E A A+ EMN K I + LYV AQ+K ER+ L+ Q+ R
Sbjct: 270 QEGKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAAR 328
>gi|302500992|ref|XP_003012489.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
gi|291176047|gb|EFE31849.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
Length = 801
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/336 (55%), Positives = 241/336 (71%), Gaps = 3/336 (0%)
Query: 10 TAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSL 69
TA S TTA S + SLYVG+L+ +V E+ LY+LFS + QV S+RVCRD R SL
Sbjct: 40 TAGEPSGTTAPATSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSL 99
Query: 70 GYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDN 129
GYAYVNY+N D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLDT+IDN
Sbjct: 100 GYAYVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDN 159
Query: 130 KALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVG 189
KAL DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+N+K+V+VG
Sbjct: 160 KALHDTFAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVG 219
Query: 190 LFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKS 246
+ +++R + + FTN+YV N+ + VTDE+ + +F +G ITSA + +D++ GKS
Sbjct: 220 HHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKS 279
Query: 247 RCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK 306
R FGFVNF +AA+AAVE LN + YVGRAQK+ ERE +LR ++E RI + K
Sbjct: 280 RGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASK 339
Query: 307 LKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVM 342
+G NLY+KNL D I+DEKL+ELFS +G ITS KVM
Sbjct: 340 YQGVNLYIKNLSDDIDDEKLRELFSSYGNITSAKVM 375
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 138/530 (26%), Positives = 241/530 (45%), Gaps = 116/530 (21%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D+ S GY +V+Y + A
Sbjct: 143 TGQGNV--FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEYGNSK-GYGFVHYETAEAA 199
Query: 83 ANAKEALNFMPINGKPIRIMY--SHRDPSIR----KSGYGNVFIKNLDTSIDNKALCDTF 136
NA + +N M +N K + + + + +D + K+ + N+++KN++ + ++ F
Sbjct: 200 TNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLF 259
Query: 137 AAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ 195
+G + S ++ D+ G+S+G+GFV F + EAA A++ LN + +++YVG ++
Sbjct: 260 EKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKH 319
Query: 196 ERAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
ER ++ + K+ N+Y+ NL++ + DE L+++F +G ITSA VM+++
Sbjct: 320 EREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGNITSAKVMREA- 378
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
D A + K +++++ E +++ K + E
Sbjct: 379 ------------IVDVPAETEKDKEADKEKAKKEGGDKSEEKGESKSESEDKSKSE---- 422
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEA 363
EK +G +S EK K + GF GF FS P+EA
Sbjct: 423 -EKTEGKT-------ESTKPEK--------------KHLGKSKGF----GFVCFSNPDEA 456
Query: 364 TRALNEMNGKMIGRKPLYVAVAQRKEERKAR--------LQAQFA--------------- 400
++A+ EMN +M+ KPLYVA+AQRK+ RK++ +++QF
Sbjct: 457 SKAVTEMNQRMVHGKPLYVALAQRKDVRKSQVSTKVIHLIRSQFTNIYQLEASIQARNTI 516
Query: 401 ---QIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQ---VF 454
Q+ A GM+ P + P Y G G +P G F Q V
Sbjct: 517 RQQQVAAAAGMA------------QPFMQPAVFYGAPGQQGFLPGAQRGMQFAGQAGMVM 564
Query: 455 PGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGI 504
PG+ G P + PGQ+ G R N +Q P F S QGI
Sbjct: 565 PGMPGGRPGQFPQF-------PGQQGG--RGMNPNQPLPPNFGMGS-QGI 604
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 158/300 (52%), Gaps = 20/300 (6%)
Query: 108 PSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENE 166
P+ + ++++ LD S+ L + F++ G V S +V D+ +S GY +V + N
Sbjct: 50 PATSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 109
Query: 167 EAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKI 226
+ A++ LN LI + + ++ +R ++ NV++ NL + ++ L
Sbjct: 110 ADGERALEDLNYTLIKGRPCRI-MWSQRDPALRKTGQ---GNVFIKNLDTAIDNKALHDT 165
Query: 227 FGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRA 286
F FG I S V +D G S+ +GFV++++ +AA A++ +NG N+K +VG +
Sbjct: 166 FAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKK 225
Query: 287 EREADLRAKFEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
+R+ S++E++K N+Y+KN++ + DE+ + LF ++G ITS + D
Sbjct: 226 DRQ------------SKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRD 273
Query: 345 -QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ G S+G GF FS E A+ A+ +N + + LYV AQ+K ER+ L+ Q+ R
Sbjct: 274 NETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAAR 333
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 539 PRPVPVPISTLTSALASASPDDRTR-MLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVL 597
PR ++ A+ +A+P+ + + MLGE +YP + +P A K+TGMLLEMD +E++
Sbjct: 693 PRDEAAGSGSINLAVFNAAPEPQQKQMLGEAIYPKILAQQPELAGKITGMLLEMDNSELI 752
Query: 598 HLIESPEALKTKVAEAMAVLQE 619
L++ AL+ KV EA+ V E
Sbjct: 753 GLVDDDVALRAKVDEALTVYDE 774
>gi|238486326|ref|XP_002374401.1| polyadenylate-binding protein [Aspergillus flavus NRRL3357]
gi|220699280|gb|EED55619.1| polyadenylate-binding protein [Aspergillus flavus NRRL3357]
Length = 713
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/341 (53%), Positives = 243/341 (71%), Gaps = 2/341 (0%)
Query: 6 AAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSK 65
A A +TTA S + SLYVG+L+ +V E+ LY+LFS + QV S+RVCRD
Sbjct: 27 APAPEVTAVESTTAPNASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVT 86
Query: 66 RSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDT 125
R SLGYAYVNY+N D A E LN+ I GKP RIM+S RDP++RK+G GNVFIKNLD+
Sbjct: 87 RRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDS 146
Query: 126 SIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQ 185
+IDNKAL DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+NDK+
Sbjct: 147 AIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKK 206
Query: 186 VYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
V+VG + +++R + + FTNVY+ N+ + VT+E+ +++F FG ITSA + +D +
Sbjct: 207 VFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQE 266
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
GKSR FGFVNF + ++A AAV+++N + YVGRAQK+ ERE +LR ++E R+ +
Sbjct: 267 GKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREEELRKQYEAARLEK 326
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
K +G NLY+KNL D ++DEKL+ELF +GTITS KVM D
Sbjct: 327 ASKYQGVNLYVKNLTDDVDDEKLRELFGPYGTITSAKVMRD 367
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 158/290 (54%), Gaps = 19/290 (6%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ LD S+ L + F++ G V S +V D+ +S GY +V + N + A++
Sbjct: 50 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 109
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN LI K + ++ +R ++ NV++ NL + ++ L F FG I S
Sbjct: 110 LNYTLIKGKPCRI-MWSQRDPALRKTGQ---GNVFIKNLDSAIDNKALHDTFAAFGNILS 165
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V +D G S+ +GFV++++ +AA A++ +NG NDK +VG + +R+
Sbjct: 166 CKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQ------ 219
Query: 296 FEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSG 353
S++E++K N+Y+KN+D + +E+ +ELF +FG ITS + DQ G S+G G
Sbjct: 220 ------SKFEEMKANFTNVYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQEGKSRGFG 273
Query: 354 FAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
F FS E A A++EMN K I + LYV AQ+K ER+ L+ Q+ R
Sbjct: 274 FVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREEELRKQYEAAR 323
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 135/239 (56%), Gaps = 21/239 (8%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D+ S GY +V+Y + A
Sbjct: 134 TGQGNV--FIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSK-GYGFVHYETAEAA 190
Query: 83 ANAKEALNFMPINGKPIRIMY--SHRDPSIR----KSGYGNVFIKNLDTSIDNKALCDTF 136
NA + +N M +N K + + + S +D + K+ + NV+IKN+D + + + F
Sbjct: 191 NNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQDVTEEEFRELF 250
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG + S ++ D G+S+G+GFV F E+AQ A+ +N I +++YVG ++ E
Sbjct: 251 EKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHE 310
Query: 197 RAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
R ++ + K+ N+YV NL + V DE L+++FG +GTITSA VM+D++
Sbjct: 311 REEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFGPYGTITSAKVMRDTN 369
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 138/291 (47%), Gaps = 45/291 (15%)
Query: 347 GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQF-AQIRAP 405
G SKG GF FS P+EA++A+ EMN +M+ KPLYVA+AQRK+ R+++L+A A+
Sbjct: 430 GKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEASIQARNTIR 489
Query: 406 GGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQV------FPGLRP 459
+ A+G+P P + P ++YG G G +P Q G F Q PG RP
Sbjct: 490 QQQAAAAAGMP-----QPYMQP-AVFYGPGQQGFIPGQRGGIAFPPQPGMVMAGIPGGRP 543
Query: 460 G---------------GPNYIMPYHLQRQVHPGQRTGVRRSGNTHQ--MQQPQF------ 496
G GPN +P + Q + G G +G + M Q QF
Sbjct: 544 GQYPGPFPGQQGGRGMGPNQQLPPNFQ-GIPMGAMQGPVPNGMGYPQGMAQVQFGRGAGG 602
Query: 497 ------MRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVS-GMPATPVETPRPVPVPISTL 549
M N QG+R + V P + G A RP L
Sbjct: 603 RGQVPGMPNMGQGMRGPGYGQGRGGVPVQQGQMRPGQGGRGQNAAQAPAGRPEEAVAGGL 662
Query: 550 TS-ALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHL 599
T+ AL++A P + +MLGE LYP ++ +P A K+TGMLLEM+ TE+L L
Sbjct: 663 TAQALSAAPPPQQKQMLGEALYPKIQAQQPELAGKITGMLLEMENTELLSL 713
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
GKS+ FGFV F SPD A+ AV ++N N K YV AQ++ R + L A +
Sbjct: 430 GKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEASIQ 483
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 153 GQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
G+SKG+GFV F + + A A+ +N ++N K +YV L R+ R Q
Sbjct: 430 GKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQ 477
>gi|324511850|gb|ADY44928.1| Polyadenylate-binding protein 1, partial [Ascaris suum]
Length = 544
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/414 (47%), Positives = 271/414 (65%), Gaps = 7/414 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +VNE+ L + FS + +V+S+RVCRD R SLGYAYVN+ P+DA A E
Sbjct: 17 SLYVGDLHPDVNETVLLEKFSNIGRVLSIRVCRDALTRRSLGYAYVNFERPEDAKQALET 76
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF ++G+PIRIM+S R PS + GNVF+KNL+ S+++KAL + F+ FG ++SCK+A
Sbjct: 77 MNFDIVHGRPIRIMWSQRRPSTSRVAAGNVFVKNLNGSVNSKALYNKFSVFGNIVSCKLA 136
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
+D +SKGYGFVQFE EEAA+ AI NG++ K++YVG F R ER++Q + F
Sbjct: 137 VDEQSKSKGYGFVQFETEEAARKAIDGTNGVIFEGKRIYVGRFQSRSERSEQAKRTTNCF 196
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNV+V N A+ + E L+++F FG I S V D DGK FGFV F++PD A AV+
Sbjct: 197 TNVFVKNFADILDKEKLQQLFAKFGKIVSCAVSVDGDGKPNGFGFVAFENPDDAEKAVKD 256
Query: 267 LNG--TTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
+ +D+ YV R QK+ ER A+L K++ E+ R ++ +GANLYLKNLDD+I+D+
Sbjct: 257 MQDYHLPGSDRKLYVSRFQKKCERLAELDRKYQLEKNERAKRYEGANLYLKNLDDAIDDD 316
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
L+ F E+G + S KVM G SKG GF F P+EA +A+ M GKM+ KPLYV++
Sbjct: 317 MLRRSFGEYGNVISAKVMRSDDGRSKGFGFVCFDKPDEAVKAMTAMKGKMVCTKPLYVSM 376
Query: 385 AQRKEERKARLQAQFAQIRAPGGM--SPLASGIPGYHHGAPRLGPQQLYYGQGT 436
AQRKE+RKA + +Q+ Q A M + SG+ Y + + P YG+GT
Sbjct: 377 AQRKEDRKAFIASQYMQRIASIRMQATSFGSGMT-YMSDSTVVQPLFACYGRGT 429
>gi|315052346|ref|XP_003175547.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
gi|311340862|gb|EFR00065.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
Length = 782
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/335 (55%), Positives = 241/335 (71%), Gaps = 3/335 (0%)
Query: 11 AAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLG 70
A +S TTA S + SLYVG+L+ +V E+ LY+LFS + QV S+RVCRD R SLG
Sbjct: 41 AGESSGTTAPATSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLG 100
Query: 71 YAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNK 130
YAYVNY+N D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLDT+IDNK
Sbjct: 101 YAYVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNK 160
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
AL DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+N+K+V+VG
Sbjct: 161 ALHDTFAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGH 220
Query: 191 FVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSR 247
+ +++R + + FTN+YV N+ + VTDE+ + +F +G ITSA + +D++ GKSR
Sbjct: 221 HIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRSLFEKYGEITSATLSRDNETGKSR 280
Query: 248 CFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKL 307
FGFVNF +AA+AAVE LN + YVGRAQK+ ERE +LR ++E RI + K
Sbjct: 281 GFGFVNFSDHEAASAAVEGLNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKY 340
Query: 308 KGANLYLKNLDDSINDEKLKELFSEFGTITSCKVM 342
+G NLY+KNL D I+DEKL+ELFS +G ITS KVM
Sbjct: 341 QGVNLYIKNLSDDIDDEKLRELFSSYGNITSAKVM 375
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 139/512 (27%), Positives = 239/512 (46%), Gaps = 96/512 (18%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D+ S GY +V+Y + A
Sbjct: 143 TGQGNV--FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEYGNSK-GYGFVHYETAEAA 199
Query: 83 ANAKEALNFMPINGKPIRIMY--SHRDPSIR----KSGYGNVFIKNLDTSIDNKALCDTF 136
NA + +N M +N K + + + + +D + K+ + N+++KN++ + ++ F
Sbjct: 200 TNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRSLF 259
Query: 137 AAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ 195
+G + S ++ D+ G+S+G+GFV F + EAA A++ LN + +++YVG ++
Sbjct: 260 EKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAAVEGLNEYELKGQKLYVGRAQKKH 319
Query: 196 ERAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
ER ++ + K+ N+Y+ NL++ + DE L+++F +G ITSA VM+++
Sbjct: 320 EREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGNITSAKVMREA- 378
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
D A A + K + + +AE ++D +++
Sbjct: 379 ------------ISDVPADAEKDKEADKEKAKKETGDKPEDKAETKSDEKSE-------- 418
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEA 363
D S ++EK + G K G SKG GF FS P+EA
Sbjct: 419 --------------DKSKSEEKTE------GKTDGAKTEKKHLGKSKGFGFVCFSNPDEA 458
Query: 364 TRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQF--------AQIRAPGGMSPLASGI 415
++A+ EMN +M+ KPLYVA+AQRK+ RK++L+A Q+ A GM+
Sbjct: 459 SKAVTEMNQRMVHGKPLYVALAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMA------ 512
Query: 416 PGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQ---VFPGLRPGGPNYIMPYHLQR 472
P + P Y G G +P G F Q V PG+ G P +
Sbjct: 513 ------QPFMQPAVFYGAPGQQGFLPGAQRGMQFAGQAGMVMPGMPGGRPGQFAQF---- 562
Query: 473 QVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGI 504
PGQ+ G R N +Q P F QGI
Sbjct: 563 ---PGQQGG--RGMNPNQPLPPNFAM-GGQGI 588
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 158/300 (52%), Gaps = 20/300 (6%)
Query: 108 PSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENE 166
P+ + ++++ LD S+ L + F++ G V S +V D+ +S GY +V + N
Sbjct: 50 PATSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 109
Query: 167 EAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKI 226
+ A++ LN LI + + ++ +R ++ NV++ NL + ++ L
Sbjct: 110 ADGERALEDLNYTLIKGRPCRI-MWSQRDPALRKTGQ---GNVFIKNLDTAIDNKALHDT 165
Query: 227 FGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRA 286
F FG I S V +D G S+ +GFV++++ +AA A++ +NG N+K +VG +
Sbjct: 166 FAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKK 225
Query: 287 EREADLRAKFEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
+R+ S++E++K N+Y+KN++ + DE+ + LF ++G ITS + D
Sbjct: 226 DRQ------------SKFEEMKANFTNIYVKNVEQDVTDEEFRSLFEKYGEITSATLSRD 273
Query: 345 -QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ G S+G GF FS E A+ A+ +N + + LYV AQ+K ER+ L+ Q+ R
Sbjct: 274 NETGKSRGFGFVNFSDHEAASAAVEGLNEYELKGQKLYVGRAQKKHEREEELRKQYEAAR 333
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 539 PRPVPVPISTLTSALASASPD-DRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVL 597
PR ++ + +A+P+ + +MLGE +YP + +P A K+TGMLLEMD +E++
Sbjct: 674 PRDEAAGPGSINLQVFNAAPEPQQKQMLGEAIYPKILAQQPELAGKITGMLLEMDNSELI 733
Query: 598 HLIESPEALKTKVAEAMAVLQE 619
L++ AL+ KV EA+ V E
Sbjct: 734 GLVDDDAALRAKVDEALTVYDE 755
>gi|403221305|dbj|BAM39438.1| polyadenylate-binding protein [Theileria orientalis strain
Shintoku]
Length = 656
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 239/652 (36%), Positives = 347/652 (53%), Gaps = 74/652 (11%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ + SLYVGDL+ +V E+ LY++F+ + V S+RVCRD R SLGYAYVNY + QDA
Sbjct: 24 FSSASLYVGDLQPDVTEAVLYEVFNTIGPVASIRVCRDSVTRKSLGYAYVNYYSTQDAEA 83
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A E LN++ I G P RIM+S+RDPS+RKSG GN+F+KNLD SID K+L DTFA FGT+LS
Sbjct: 84 ALENLNYIEIKGHPTRIMWSNRDPSLRKSGAGNIFVKNLDKSIDTKSLYDTFAHFGTILS 143
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA+DS G S+ YGFV +E+EE+A+ AI+ +NGMLI K+V V F+R+Q+R + V
Sbjct: 144 CKVAVDSTGASRRYGFVHYESEESAREAIEKVNGMLIGGKKVEVAPFLRKQDRETEEV-- 201
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
+TN+YV N +E L++ +G ITS ++ +DS G R F FVN++ A V
Sbjct: 202 -YTNLYVRNFPADWDEEALRQFLEKYGEITSMMLKEDSKG--RRFAFVNYKEASVAKEVV 258
Query: 265 EKLNGTTNNDKV--WYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
LN + V Q + +R+ L+A+F + +K +NLY+KNLDD+ +
Sbjct: 259 TTLNDLKLEEASDPLLVCPHQDKVKRQNMLKAQFSTVSPGQDDKRLTSNLYIKNLDDTFD 318
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
D L ELF +FGTITS KVM+D + S+G GF FS P+EAT+A+ M+ K++ KPLYV
Sbjct: 319 DASLGELFKQFGTITSSKVMLDANNNSRGFGFVCFSNPQEATKAIAAMHLKLVKGKPLYV 378
Query: 383 AVAQRKEERKARL-----------------------QAQFAQIRAPGGMSPLASGIPGYH 419
+A+++++R R+ Q QF + P + P P +
Sbjct: 379 GLAEKRDQRLMRMQQRRGFEPHARDLMFSDPQSMYYQRQFPGVVVPNNVPPSKKFPPNFT 438
Query: 420 HGAPRLGPQQLYYGQGTP-----------------------GLMPPQAAGYGFQQQVFPG 456
P+L Y P + P G +PG
Sbjct: 439 TTNPQLNNYPPNYNANFPPVNSYNNYPVRNVGANAAAANVRNMSPMNNTAVGSNIPHYPG 498
Query: 457 LRPGGPNYIMP------YHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNA 510
+ P +++P ++ V P V M P M G+R N
Sbjct: 499 VVPPNMAHVVPGAMGVPANMAHHVVPPNMAHVVPG----TMGVPPTMVPGAVGMRR--NN 552
Query: 511 RNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPV-PISTLTSALASASPDDRTRMLGEQL 569
N Q M PV S TP R +PV P + + + +M+GE+L
Sbjct: 553 NNAKSQ----MPPV----SAFKFTPQARNRDMPVHPQYVVNGNVQVDDVALQKQMIGERL 604
Query: 570 YPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAA 621
+P++ P A K+TGM+LE+D E+L L++ + LK K+ EA+ VL++A+
Sbjct: 605 FPIIARDNPDLAGKITGMMLEIDNQELLQLLDDNDQLKAKIDEAIRVLKQAS 656
>gi|22329932|ref|NP_174676.2| poly(A) binding protein 1 [Arabidopsis thaliana]
gi|332193555|gb|AEE31676.1| poly(A) binding protein 1 [Arabidopsis thaliana]
Length = 407
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/391 (51%), Positives = 256/391 (65%), Gaps = 24/391 (6%)
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ + GKP+RIM+S RDPS R SG GNVF+KNLD SIDNK LCD F+AFG VLSCK
Sbjct: 2 EVLNYCKLKGKPMRIMFSERDPSNRMSGRGNVFVKNLDESIDNKQLCDMFSAFGKVLSCK 61
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF 206
VA D++G SKGYGFVQF ++ + A NG LI ++ ++V FV R Q + S F
Sbjct: 62 VARDASGVSKGYGFVQFYSDLSVYTACNFHNGTLIRNQHIHVCPFV---SRGQWDKSRVF 118
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV NL ET TD DLK++FG FG ITSA+VMKD +GKSR FGFVNF+ +AA A+EK
Sbjct: 119 TNVYVKNLVETATDADLKRLFGEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEK 178
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKL-KGANLYLKNLDDSINDEK 325
+NG ++K +VGRAQ++ R DL+AKFE E+I R K KG NLY+KNLDDS+++ K
Sbjct: 179 MNGVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNTK 238
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L+ELFSEFGTITSCKVMV +G SKG GF FS EEA++A+ +MNGKM+G KP+YV++A
Sbjct: 239 LEELFSEFGTITSCKVMVHSNGISKGVGFVEFSTSEEASKAMLKMNGKMVGNKPIYVSLA 298
Query: 386 QRKEERKARLQAQ-------------FAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYY 432
Q KE+ K LQ Q F+Q+ AP M + + GY+ P +
Sbjct: 299 QCKEQHKLHLQTQFNNPPPSPHQQPIFSQVVAPATMLSQQTPLRGYN-----FQPYSM-C 352
Query: 433 GQGTPGLMPP-QAAGYGFQQQVFPGLRPGGP 462
G P PP + Q P L P P
Sbjct: 353 GSRMPNSCPPISIPNFMVPQPFRPTLYPPAP 383
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 160/294 (54%), Gaps = 29/294 (9%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GNV +V +L+++++ QL D+FS +V+S +V RD S S GY +V + +
Sbjct: 28 SGRGNV--FVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSK-GYGFVQFYS---D 81
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYG------NVFIKNLDTSIDNKALCDTF 136
+ A NF NG IR + H P + + + NV++KNL + + L F
Sbjct: 82 LSVYTACNFH--NGTLIRNQHIHVCPFVSRGQWDKSRVFTNVYVKNLVETATDADLKRLF 139
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG + S V D G+S+ +GFV FE EAA AI+ +NG+++++K+++VG R+
Sbjct: 140 GEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVVVDEKELHVGRAQRKTN 199
Query: 197 RAQQNVSPKF--------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
R +++ KF N+YV NL ++V + L+++F FGTITS VM S
Sbjct: 200 RT-EDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNTKLEELFSEFGTITSCKVMVHS 258
Query: 243 DGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKF 296
+G S+ GFV F + + A+ A+ K+NG +K YV AQ + + + L+ +F
Sbjct: 259 NGISKGVGFVEFSTSEEASKAMLKMNGKMVGNKPIYVSLAQCKEQHKLHLQTQF 312
>gi|349803919|gb|AEQ17432.1| putative poly binding cytoplasmic 1 [Hymenochirus curtipes]
Length = 590
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/336 (55%), Positives = 238/336 (70%), Gaps = 5/336 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL Q+V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
CKV D NG SKGYGFV FE +EAA+ AI +NGML+ND++V+VG F R+ER +
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N E + DE LK++FG +G S VM D GKS+ FGFV+F+ + A
Sbjct: 187 AKEFTNVYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDDSGKSKGFGFVSFERHEDAQK 246
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV+ +NG N K YVGRA K+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+
Sbjct: 247 AVDDMNGKDMNGKAIYVGRA-KKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGID 305
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
DE+L++ FS FGTITS KVM++ G SKG GF FS
Sbjct: 306 DERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFS 340
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 167/298 (56%), Gaps = 17/298 (5%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A++K+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
EREA+L A+ ++ N+Y+KN + ++DE+LKE+F ++G S KVM D
Sbjct: 177 KEREAELGARAKE----------FTNVYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDD 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G SKG GF +F E+A +A+++MNGK + K +YV A +K ER+ L+ +F Q++
Sbjct: 227 SGKSKGFGFVSFERHEDAQKAVDDMNGKDMNGKAIYVGRA-KKVERQTELKRKFEQMK 283
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
S LASA P ++ +MLGE+L+PL++ + P A K+TGMLLE+D +E+LH++ESPE+L++KV
Sbjct: 504 SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKV 563
Query: 611 AEAMAVLQEAAARSDVNEKLGSLAV 635
EA+ VLQ A+ + + + V
Sbjct: 564 DEAV-VLQAHQAKEAAQKSVSATGV 587
>gi|15228016|ref|NP_181204.1| poly(A) binding protein 7 [Arabidopsis thaliana]
gi|12229883|sp|Q9ZQA8.1|PABPX_ARATH RecName: Full=Probable polyadenylate-binding protein At2g36660;
Short=PABP; Short=Poly(A)-binding protein At2g36660
gi|4415911|gb|AAD20142.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330254185|gb|AEC09279.1| poly(A) binding protein 7 [Arabidopsis thaliana]
Length = 609
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 240/625 (38%), Positives = 351/625 (56%), Gaps = 49/625 (7%)
Query: 3 ATGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRD 62
AT AA AA S++ ++ P SLYVGDL +V E LYD F++ + SVR+C+D
Sbjct: 2 ATVHAALHAADASSSGSSSPV---TASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKD 58
Query: 63 QSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKN 122
S SL Y Y N+ + QDA A E N +NGK IR+M+S R P R++G GNVF+KN
Sbjct: 59 ASSGRSLCYGYANFLSRQDANLAIEKKNNSLLNGKMIRVMWSVRAPDARRNGVGNVFVKN 118
Query: 123 LDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIN 182
L S+ N L D F FG ++SCKVA +G+S+GYGFVQFE E+AA AI+ LN ++
Sbjct: 119 LPESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVA 178
Query: 183 DKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
DK++YVG F+++ +R + K+TN+Y+ NL V+++ L++ F FG I S + KD
Sbjct: 179 DKEIYVGKFMKKTDRVKP--EEKYTNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDE 236
Query: 243 DGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
+ R + FVNF +P+ A A E +NGT K YVGRAQK+AERE LR +F+++
Sbjct: 237 NRLCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEE 296
Query: 303 RYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEE 362
+ K +N+Y+KN++ ++ +E+L++ FS+ GTITS K+M D+ G SKG GF FS PEE
Sbjct: 297 QKMIAKVSNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEE 356
Query: 363 ATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGA 422
A A+ +G+M KPLYVA+AQ+KE+RK +LQ QF S AS PG + A
Sbjct: 357 AIDAVKTFHGQMFHGKPLYVAIAQKKEDRKMQLQVQFGNRVEARKSSSSASVNPGTY--A 414
Query: 423 PRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGV 482
P LYY PG++ Q +P L N I +P
Sbjct: 415 P------LYYTNTHPGMV----------YQSYP-LMWKSANMI------GSSYP------ 445
Query: 483 RRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPV 542
N+ + P + N+ R N D++ VS VP ++ + M + +
Sbjct: 446 ----NSEAVTYPPMVANAPSKNR--QNRIGKLDRNAVSYVPNVYQSTQMLPLSRDFSKQQ 499
Query: 543 PVPISTLTSALASASPDDRTRMLGEQL-------YPLVENIEPVHASKVTGMLLEMDQTE 595
+ + ++ +G ++ +PLVE +EP A+K+TGMLLEMD++E
Sbjct: 500 HSRTYGRGKEMKKSIQQRQSETVGMEMQLLGELLHPLVEKLEPQLANKITGMLLEMDKSE 559
Query: 596 VLHLIESPEALKTKVAEAMAVLQEA 620
+L L++SPE L +V EA VL+ +
Sbjct: 560 LLLLLKSPEDLAVRVDEAFEVLKSS 584
>gi|346323639|gb|EGX93237.1| polyadenylate-binding protein [Cordyceps militaris CM01]
Length = 736
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/344 (53%), Positives = 244/344 (70%), Gaps = 3/344 (0%)
Query: 4 TGAAAATAAVTSAT-TAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRD 62
T +AAT T +A P + SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD
Sbjct: 30 TSVSAATGDDAGPTPNSAAPHPQNSASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRD 89
Query: 63 QSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKN 122
R SLGYAYVNY++ D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKN
Sbjct: 90 AVTRRSLGYAYVNYNSTPDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKN 149
Query: 123 LDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIN 182
LD +IDNKAL DTFAAFG +LSCKVA D G SKGYGFV +E +EAAQ AIK +NGML+N
Sbjct: 150 LDVAIDNKALHDTFAAFGNILSCKVAQDETGSSKGYGFVHYETDEAAQQAIKHVNGMLLN 209
Query: 183 DKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMK 240
+K+VYVG + +++R + + FTNVY+ N+A VTD+ + +F G +TS+ + +
Sbjct: 210 EKKVYVGHHIPKKDRQSKFEEMKANFTNVYIKNIAPDVTDDQFRVLFEAHGDVTSSSIAR 269
Query: 241 DSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQER 300
D DGKSR FGFVNF + +AA+AAVE+LN + + YVGRAQK+ ERE +LR +E R
Sbjct: 270 DPDGKSRGFGFVNFTTHEAASAAVEELNNKDFHGQELYVGRAQKKHEREEELRKSYEAAR 329
Query: 301 ISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
I + K +G NLY+KNLDD ++DEKL+ +F+EFG ITS KVM D
Sbjct: 330 IEKASKYQGVNLYIKNLDDDVDDEKLRTMFTEFGPITSAKVMRD 373
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 150/290 (51%), Gaps = 19/290 (6%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ LD S+ L + F+ G V S +V D+ +S GY +V + + + A++
Sbjct: 56 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALEE 115
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN LI + + ++ +R ++ NV++ NL + ++ L F FG I S
Sbjct: 116 LNYTLIKGRPCRI-MWSQRDPALRKTGQ---GNVFIKNLDVAIDNKALHDTFAAFGNILS 171
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V +D G S+ +GFV++++ +AA A++ +NG N+K YVG + +R+
Sbjct: 172 CKVAQDETGSSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYVGHHIPKKDRQ------ 225
Query: 296 FEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSG 353
S++E++K N+Y+KN+ + D++ + LF G +TS + D G S+G G
Sbjct: 226 ------SKFEEMKANFTNVYIKNIAPDVTDDQFRVLFEAHGDVTSSSIARDPDGKSRGFG 279
Query: 354 FAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
F F+ E A+ A+ E+N K + LYV AQ+K ER+ L+ + R
Sbjct: 280 FVNFTTHEAASAAVEELNNKDFHGQELYVGRAQKKHEREEELRKSYEAAR 329
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 160/346 (46%), Gaps = 76/346 (21%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D++ SS GY +V+Y + A
Sbjct: 140 TGQGNV--FIKNLDVAIDNKALHDTFAAFGNILSCKVAQDETG-SSKGYGFVHYETDEAA 196
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIR--------KSGYGNVFIKNLDTSIDNKALCD 134
A + +N M +N K ++ H P K+ + NV+IKN+ + +
Sbjct: 197 QQAIKHVNGMLLNEK--KVYVGHHIPKKDRQSKFEEMKANFTNVYIKNIAPDVTDDQFRV 254
Query: 135 TFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRR 194
F A G V S +A D +G+S+G+GFV F EAA A++ LN + +++YVG ++
Sbjct: 255 LFEAHGDVTSSSIARDPDGKSRGFGFVNFTTHEAASAAVEELNNKDFHGQELYVGRAQKK 314
Query: 195 QERAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
ER ++ + K+ N+Y+ NL + V DE L+ +F FG ITSA VM+DS
Sbjct: 315 HEREEELRKSYEAARIEKASKYQGVNLYIKNLDDDVDDEKLRTMFTEFGPITSAKVMRDS 374
Query: 243 -------DGKS--------------------------------------------RCFGF 251
+GK + FGF
Sbjct: 375 PSDDEDEEGKEAEAEDKDKENKKADAEAEAAEAAEEENSDKEKKERKGSKKLGKSKGFGF 434
Query: 252 VNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
V F +PD A AV ++N N K YV AQ++ R++ L A +
Sbjct: 435 VCFSNPDDATKAVAEMNQRMINGKPLYVALAQRKDVRKSQLEASIQ 480
>gi|326474523|gb|EGD98532.1| polyadenylate-binding protein [Trichophyton tonsurans CBS 112818]
Length = 676
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/331 (56%), Positives = 239/331 (72%), Gaps = 3/331 (0%)
Query: 15 SATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYV 74
S TTA S + SLYVG+L+ +V E+ LY+LFS + QV S+RVCRD R SLGYAYV
Sbjct: 45 SGTTAPATSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYV 104
Query: 75 NYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCD 134
NY+N D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLDT+IDNKAL D
Sbjct: 105 NYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHD 164
Query: 135 TFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRR 194
TFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+N+K+V+VG + +
Sbjct: 165 TFAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAK 224
Query: 195 QERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFGF 251
++R + + FTN+YV N+ + VTDE+ + +F +G ITSA + +D++ GKSR FGF
Sbjct: 225 KDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGF 284
Query: 252 VNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGAN 311
VNF +AA+AAVE LN + YVGRAQK+ ERE +LR ++E RI + K +G N
Sbjct: 285 VNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVN 344
Query: 312 LYLKNLDDSINDEKLKELFSEFGTITSCKVM 342
LY+KNL D I+DEKL+ELFS +G ITS KVM
Sbjct: 345 LYIKNLSDDIDDEKLRELFSSYGNITSAKVM 375
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 162/621 (26%), Positives = 283/621 (45%), Gaps = 138/621 (22%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D+ S GY +V+Y + A
Sbjct: 143 TGQGNV--FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEYGNSK-GYGFVHYETAEAA 199
Query: 83 ANAKEALNFMPINGKPIRIMY--SHRDPSIR----KSGYGNVFIKNLDTSIDNKALCDTF 136
NA + +N M +N K + + + + +D + K+ + N+++KN++ + ++ F
Sbjct: 200 TNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLF 259
Query: 137 AAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ 195
+G + S ++ D+ G+S+G+GFV F + EAA A++ LN + +++YVG ++
Sbjct: 260 EKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKH 319
Query: 196 ERAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
ER ++ + K+ N+Y+ NL++ + DE L+++F +G ITSA VM+++
Sbjct: 320 EREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGNITSAKVMREA- 378
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
DA A A + K +++++ E AK E E
Sbjct: 379 ------------IVDAPAEAEKDKEADKEKAKKEAGDKSEEKGE------AKSESE---- 416
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEA 363
D S ++EK + G S K G SKG GF FS P+EA
Sbjct: 417 --------------DKSKSEEKTE------GKTESAKPEKKHLGKSKGFGFVCFSNPDEA 456
Query: 364 TRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ---IRAPGGMSPLASGIPGYHH 420
++A+ EMN +M+ KPLYVA+AQRK+ RK++L+ A + P +P S H
Sbjct: 457 SKAVTEMNQRMVHGKPLYVALAQRKDVRKSQLETPSANSKLLLPPEWRNPSCSLPSSMAH 516
Query: 421 GAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRT 480
A + + ++ + + V PG+ G P + PGQ+
Sbjct: 517 LASK----------ASSPVLSVECSLLVKLVWVMPGMPSGRPGQFPQF-------PGQQG 559
Query: 481 G-VRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETP 539
G G H M+QP
Sbjct: 560 GRAPGQGGIHAMKQP--------------------------------------------- 574
Query: 540 RPVPVPISTLTSALASASPDDRTR-MLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLH 598
+ ++ A+ +A+P+ + + MLGE +YP + +P A K+TGMLLEMD +E++
Sbjct: 575 ------LRSIILAVFNAAPESQQKQMLGEAIYPKILAQQPELAGKITGMLLEMDNSELIG 628
Query: 599 LIESPEALKTKVAEAMAVLQE 619
L++ AL+ KV EA+ V E
Sbjct: 629 LVDDDVALRAKVDEALTVYDE 649
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 158/300 (52%), Gaps = 20/300 (6%)
Query: 108 PSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENE 166
P+ + ++++ LD S+ L + F++ G V S +V D+ +S GY +V + N
Sbjct: 50 PATSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 109
Query: 167 EAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKI 226
+ A++ LN LI + + ++ +R ++ NV++ NL + ++ L
Sbjct: 110 ADGERALEDLNYTLIKGRPCRI-MWSQRDPALRKTGQ---GNVFIKNLDTAIDNKALHDT 165
Query: 227 FGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRA 286
F FG I S V +D G S+ +GFV++++ +AA A++ +NG N+K +VG +
Sbjct: 166 FAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKK 225
Query: 287 EREADLRAKFEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
+R+ S++E++K N+Y+KN++ + DE+ + LF ++G ITS + D
Sbjct: 226 DRQ------------SKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRD 273
Query: 345 -QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ G S+G GF FS E A+ A+ +N + + LYV AQ+K ER+ L+ Q+ R
Sbjct: 274 NETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAAR 333
>gi|326478130|gb|EGE02140.1| polyadenylate-binding protein [Trichophyton equinum CBS 127.97]
Length = 782
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/331 (56%), Positives = 239/331 (72%), Gaps = 3/331 (0%)
Query: 15 SATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYV 74
S TTA S + SLYVG+L+ +V E+ LY+LFS + QV S+RVCRD R SLGYAYV
Sbjct: 45 SGTTAPATSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYV 104
Query: 75 NYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCD 134
NY+N D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLDT+IDNKAL D
Sbjct: 105 NYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHD 164
Query: 135 TFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRR 194
TFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+N+K+V+VG + +
Sbjct: 165 TFAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAK 224
Query: 195 QERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFGF 251
++R + + FTN+YV N+ + VTDE+ + +F +G ITSA + +D++ GKSR FGF
Sbjct: 225 KDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGF 284
Query: 252 VNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGAN 311
VNF +AA+AAVE LN + YVGRAQK+ ERE +LR ++E RI + K +G N
Sbjct: 285 VNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVN 344
Query: 312 LYLKNLDDSINDEKLKELFSEFGTITSCKVM 342
LY+KNL D I+DEKL+ELFS +G ITS KVM
Sbjct: 345 LYIKNLSDDIDDEKLRELFSSYGNITSAKVM 375
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 179/668 (26%), Positives = 308/668 (46%), Gaps = 126/668 (18%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D+ S GY +V+Y + A
Sbjct: 143 TGQGNV--FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEYGNSK-GYGFVHYETAEAA 199
Query: 83 ANAKEALNFMPINGKPIRIMY--SHRDPSIR----KSGYGNVFIKNLDTSIDNKALCDTF 136
NA + +N M +N K + + + + +D + K+ + N+++KN++ + ++ F
Sbjct: 200 TNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLF 259
Query: 137 AAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ 195
+G + S ++ D+ G+S+G+GFV F + EAA A++ LN + +++YVG ++
Sbjct: 260 EKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKH 319
Query: 196 ERAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
ER ++ + K+ N+Y+ NL++ + DE L+++F +G ITSA VM+++
Sbjct: 320 EREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGNITSAKVMREA- 378
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
DA A A + K +++++ E AK E E
Sbjct: 379 ------------IVDAPAEAEKDKEADKEKAKKEAGDKSEEKGE------AKSESE---- 416
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEA 363
D S ++EK + G S K G SKG GF FS P+EA
Sbjct: 417 --------------DKSKSEEKTE------GKTESAKPEKKHLGKSKGFGFVCFSNPDEA 456
Query: 364 TRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFA--------QIRAPGGMS-PLASG 414
++A+ EMN +M+ KPLYVA+AQRK+ RK++L+A Q+ A GM+ P
Sbjct: 457 SKAVTEMNQRMVHGKPLYVALAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMAQPFMQ- 515
Query: 415 IPGYHHGAPRL-----GPQQLYYGQGTPGL-MPPQAAGYGFQQQVFPGLRPG---GPNYI 465
P +GAP G Q+ G G+ MP +G Q FPG + G PN
Sbjct: 516 -PAVFYGAPGQQGFLPGAQRGMQFAGQAGMVMPGMPSGRPGQFPQFPGQQGGRGMNPNQP 574
Query: 466 MP--YHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVP 523
+P + + Q P ++ +G + + PQ + ++ + M P
Sbjct: 575 LPPNFAMGNQAIP--MGAMQGAGIPNGLNYPQIGQ-----VQSFGRGGGRGQGPMQGMPP 627
Query: 524 VPF---EVSGMPATP----------------------------VETPRPVPVPISTLTSA 552
++ G P P PR ++ A
Sbjct: 628 AAGNAPQMRGGPGAPGFAQGRNMPIQQGGRAGPGGRGQGAPGQGGIPRDEAAGSGSINLA 687
Query: 553 LASASPDDRTR-MLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVA 611
+ +A+P+ + + MLGE +YP + +P A K+TGMLLEMD +E++ L++ AL+ KV
Sbjct: 688 VFNAAPEPQQKQMLGEAIYPKILAQQPELAGKITGMLLEMDNSELIGLVDDDVALRAKVD 747
Query: 612 EAMAVLQE 619
EA+ V E
Sbjct: 748 EALTVYDE 755
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 158/300 (52%), Gaps = 20/300 (6%)
Query: 108 PSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENE 166
P+ + ++++ LD S+ L + F++ G V S +V D+ +S GY +V + N
Sbjct: 50 PATSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 109
Query: 167 EAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKI 226
+ A++ LN LI + + ++ +R ++ NV++ NL + ++ L
Sbjct: 110 ADGERALEDLNYTLIKGRPCRI-MWSQRDPALRKTGQ---GNVFIKNLDTAIDNKALHDT 165
Query: 227 FGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRA 286
F FG I S V +D G S+ +GFV++++ +AA A++ +NG N+K +VG +
Sbjct: 166 FAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKK 225
Query: 287 EREADLRAKFEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
+R+ S++E++K N+Y+KN++ + DE+ + LF ++G ITS + D
Sbjct: 226 DRQ------------SKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRD 273
Query: 345 -QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ G S+G GF FS E A+ A+ +N + + LYV AQ+K ER+ L+ Q+ R
Sbjct: 274 NETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAAR 333
>gi|338722679|ref|XP_001915947.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) binding protein,
cytoplasmic 4-like [Equus caballus]
Length = 397
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/368 (51%), Positives = 254/368 (69%), Gaps = 4/368 (1%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
V + Y SLYVGDL +V E L+ FS V V+S+R+CRD R SLGYAYVN+
Sbjct: 3 VAAKYRQASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLA 62
Query: 81 DAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
DA A + +NF I GK IR+M+S RD +RKSG GNVFIKNLD SIDNK L + F+AFG
Sbjct: 63 DAQKALDTMNFDTIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSAFG 122
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ- 199
+LS KV D G S+GY FV F+N+ AA AI+ +NG L+ D +++VG F RQ+R
Sbjct: 123 KILSSKVMSDDQG-SRGYAFVHFQNQMAADRAIEEMNGALLKDCRLFVGRFKNRQDREAE 181
Query: 200 -QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
QN + +FTN+Y+ N + + D+ L+++F +G S VM DS GKS+ FGFV+F S +
Sbjct: 182 LQNKANEFTNIYIKNFGDDMDDKRLEEVFSKYGKTVSVKVMTDSTGKSKGFGFVSFYSHE 241
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
AA AVE++NG N ++ +VGRAQK+AER+A+L+ FEQ++ R+ + +G LY+KNLD
Sbjct: 242 AAQKAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQQKQERFRRCQGVKLYIKNLD 301
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
D+I+DEKL+ FS FG+I+ KVM + G SKG G FS PEEATRA+ EMNG+++G K
Sbjct: 302 DTIDDEKLRREFSSFGSISRVKVM-KEEGRSKGFGLICFSSPEEATRAMTEMNGRILGSK 360
Query: 379 PLYVAVAQ 386
PL +A+AQ
Sbjct: 361 PLNIALAQ 368
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 158/286 (55%), Gaps = 16/286 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L F+ G VLS ++ D +S GY +V F AQ A+
Sbjct: 11 SLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDT 70
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N I K + + ++ +R ++ NV++ NL +++ ++ L + F FG I S
Sbjct: 71 MNFDTIKGKSIRL-MWSQRDAYLRK---SGIGNVFIKNLDKSIDNKTLYEHFSAFGKILS 126
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ VM D G SR + FV+FQ+ AA A+E++NG D +VGR + R +REA+L+ K
Sbjct: 127 SKVMSDDQG-SRGYAFVHFQNQMAADRAIEEMNGALLKDCRLFVGRFKNRQDREAELQNK 185
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ N+Y+KN D ++D++L+E+FS++G S KVM D G SKG GF
Sbjct: 186 ANE----------FTNIYIKNFGDDMDDKRLEEVFSKYGKTVSVKVMTDSTGKSKGFGFV 235
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ 401
+F E A +A+ EMNGK I + L+V AQ+K ER+A L+ F Q
Sbjct: 236 SFYSHEAAQKAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQ 281
>gi|344277245|ref|XP_003410413.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Loxodonta africana]
Length = 602
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/411 (48%), Positives = 268/411 (65%), Gaps = 6/411 (1%)
Query: 7 AAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKR 66
AA T A V + Y SLYVGDL +V E L+ FS V V+S+R+CRD R
Sbjct: 182 AAETVHAGRAREMNVAAKYRMASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTR 241
Query: 67 SSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTS 126
SLGYAYVN+ + DA A + +NF I GK IR+M+S RD +RKSG GNVFIKNLD S
Sbjct: 242 RSLGYAYVNFLHVADAQKALDTMNFDVIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLDKS 301
Query: 127 IDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQV 186
IDNK L + F+ FG +LS KV D G SKGY FV F+N+ AA AI+ +NG L+ + +V
Sbjct: 302 IDNKTLYEHFSTFGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGTLLKNCRV 360
Query: 187 YVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG 244
+V F R++R + N + +FTNVY+ N + + D LK++F +GT S VM DS G
Sbjct: 361 FVSRFKSRKDRESELKNKASEFTNVYIKNFGDDMDDMRLKEVFSKYGTTLSVKVMTDSSG 420
Query: 245 KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRY 304
KS+ FGFV+F S +AA AVE++NG N ++ +VGRAQK+ ER+A+L+ FEQ R R+
Sbjct: 421 KSKGFGFVSFASHEAAKNAVEEMNGKDINGQLIFVGRAQKKIERQAELKQMFEQLRQERF 480
Query: 305 EKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEAT 364
+ +G LY+KNLDD+I+DEKL++ F+ FG+I+ KVM + G SKG G FS EEA
Sbjct: 481 RRCRGVKLYIKNLDDTIDDEKLRKEFASFGSISRVKVM-QEEGRSKGFGLICFSSHEEAI 539
Query: 365 RALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGI 415
+A+ EMNG+++G KPL +A+AQR EERK Q + GGM+ + + I
Sbjct: 540 KAMTEMNGRILGSKPLNIALAQRNEERKTCFDNQ--XVGRGGGMTVIPAXI 588
>gi|302658195|ref|XP_003020804.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
gi|291184669|gb|EFE40186.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
Length = 816
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/335 (55%), Positives = 240/335 (71%), Gaps = 3/335 (0%)
Query: 11 AAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLG 70
A S T+A S + SLYVG+L+ +V E+ LY+LFS + QV S+RVCRD R SLG
Sbjct: 57 AGEPSGTSAPATSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLG 116
Query: 71 YAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNK 130
YAYVNY+N D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLDT+IDNK
Sbjct: 117 YAYVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNK 176
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
AL DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+N+K+V+VG
Sbjct: 177 ALHDTFAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGH 236
Query: 191 FVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSR 247
+ +++R + + FTN+YV N+ + VTDE+ + +F +G ITSA + +D++ GKSR
Sbjct: 237 HIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSR 296
Query: 248 CFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKL 307
FGFVNF +AA+AAVE LN + YVGRAQK+ ERE +LR ++E RI + K
Sbjct: 297 GFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKY 356
Query: 308 KGANLYLKNLDDSINDEKLKELFSEFGTITSCKVM 342
+G NLY+KNL D I+DEKL+ELFS +G ITS KVM
Sbjct: 357 QGVNLYIKNLSDDIDDEKLRELFSSYGNITSAKVM 391
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 141/530 (26%), Positives = 240/530 (45%), Gaps = 116/530 (21%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D+ S GY +V+Y + A
Sbjct: 159 TGQGNV--FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEYGNSK-GYGFVHYETAEAA 215
Query: 83 ANAKEALNFMPINGKPIRIMY--SHRDPSIR----KSGYGNVFIKNLDTSIDNKALCDTF 136
NA + +N M +N K + + + + +D + K+ + N+++KN++ + ++ F
Sbjct: 216 TNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLF 275
Query: 137 AAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ 195
+G + S ++ D+ G+S+G+GFV F + EAA A++ LN + +++YVG ++
Sbjct: 276 EKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKH 335
Query: 196 ERAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
ER ++ + K+ N+Y+ NL++ + DE L+++F +G ITSA VM+++
Sbjct: 336 EREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGNITSAKVMREA- 394
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
D A + K +++++ E +K E E
Sbjct: 395 ------------IVDVPAETEKDKEADKEKAKKETGDKSEEKGE------SKSESE---- 432
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEA 363
D S ++EK + G S K G SKG GF FS P+EA
Sbjct: 433 --------------DKSKSEEKTE------GKTESAKPEKKHLGKSKGFGFVCFSNPDEA 472
Query: 364 TRALNEMNGKMIGRKPLYVAVAQRKEERKAR--------LQAQFA--------------- 400
++A+ EMN +M+ KPLYVA+AQRK+ RK++ L++Q
Sbjct: 473 SKAVTEMNQRMVHGKPLYVALAQRKDVRKSQVSTKVIHFLRSQVTNIYQLEASIQARNTI 532
Query: 401 ---QIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQ---VF 454
Q+ A GM+ P + P Y G G +P G F Q V
Sbjct: 533 RQQQVAAAAGMA------------QPFMQPAVFYGAPGQQGFLPGAQRGMQFAGQAGMVM 580
Query: 455 PGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGI 504
PG+ G P + PGQ+ G R N +Q P F S QGI
Sbjct: 581 PGMPGGRPGQFPQF-------PGQQGG--RGMNPNQPLPPNFAM-SGQGI 620
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 158/300 (52%), Gaps = 20/300 (6%)
Query: 108 PSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENE 166
P+ + ++++ LD S+ L + F++ G V S +V D+ +S GY +V + N
Sbjct: 66 PATSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 125
Query: 167 EAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKI 226
+ A++ LN LI + + ++ +R ++ NV++ NL + ++ L
Sbjct: 126 ADGERALEDLNYTLIKGRPCRI-MWSQRDPALRKTGQ---GNVFIKNLDTAIDNKALHDT 181
Query: 227 FGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRA 286
F FG I S V +D G S+ +GFV++++ +AA A++ +NG N+K +VG +
Sbjct: 182 FAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKK 241
Query: 287 EREADLRAKFEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
+R+ S++E++K N+Y+KN++ + DE+ + LF ++G ITS + D
Sbjct: 242 DRQ------------SKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRD 289
Query: 345 -QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ G S+G GF FS E A+ A+ +N + + LYV AQ+K ER+ L+ Q+ R
Sbjct: 290 NETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAAR 349
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 539 PRPVPVPISTLTSALASASPD-DRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVL 597
PR ++ A+ +A+P+ + +MLGE +YP + +P A K+TGMLLEMD +E++
Sbjct: 708 PRDEAAGSGSINLAVFNAAPEPQQKQMLGEAIYPKILAQQPELAGKITGMLLEMDNSELI 767
Query: 598 HLIESPEALKTKVAEAMAVLQE 619
L++ AL+ KV EA+ V E
Sbjct: 768 GLVDDDVALRAKVDEALTVYDE 789
>gi|410076202|ref|XP_003955683.1| hypothetical protein KAFR_0B02500 [Kazachstania africana CBS 2517]
gi|372462266|emb|CCF56548.1| hypothetical protein KAFR_0B02500 [Kazachstania africana CBS 2517]
Length = 582
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 220/469 (46%), Positives = 300/469 (63%), Gaps = 25/469 (5%)
Query: 12 AVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGY 71
A +S + S + SLYVGDL+ +V+E+ LYD+FS + V S+RVCRD ++SLGY
Sbjct: 24 APSSTGSEGQQSDSNSTSLYVGDLDPSVSEALLYDIFSPIGSVTSIRVCRDAITKTSLGY 83
Query: 72 AYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
AYVN+++ + A E LN+ PI G+ RIM+S RDP++RK G GN+FIKNL+ IDNKA
Sbjct: 84 AYVNFADHEAGKVAIERLNYTPIKGRLCRIMWSQRDPALRKKGNGNIFIKNLNADIDNKA 143
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L DTF+ FG +LS K+A D NG SKG+GFV FE E AA+ AI LNGML+N +++YV
Sbjct: 144 LYDTFSVFGNILSSKIATDENGNSKGFGFVHFEEEAAAKEAIDALNGMLLNGQEIYVAPH 203
Query: 192 VRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCF 249
+ R+ER Q FTNVYV N+ T+E+ K++F G +S ++ K DGK + F
Sbjct: 204 LSRKERDSQLEKTRANFTNVYVKNVPLDTTEEEFKELFEKPGKTSSIVLEKGEDGKLKGF 263
Query: 250 GFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKG 309
GFVN+++ + A AVE+LN T + YVGRAQK+ ER L+ ++E R+ + K +G
Sbjct: 264 GFVNYENHEDALKAVEELNNTEFKGQELYVGRAQKKYERMQALKQQYEATRLEKMAKYQG 323
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNE 369
NL++KNLDDSI+DEKLKE F+ FGTITS KVM ++G SKG GF FS PEEAT+A+ E
Sbjct: 324 VNLFIKNLDDSIDDEKLKEEFAPFGTITSTKVMRTENGKSKGFGFVCFSSPEEATKAITE 383
Query: 370 MNGKMIGRKPLYVAVAQRKEERKARLQAQF---AQIR---APGGMSPLASGIPGYHHGAP 423
N +++ KPLYVA+AQRKE R+++L Q +Q+R A + A+GIPG
Sbjct: 384 KNQQIVAGKPLYVAIAQRKEVRRSQLAQQIQARSQMRYQQATAAAAAAAAGIPG------ 437
Query: 424 RLGPQQLYYGQGTPGLMPPQAAGY-GFQQQVFPGLRP----GGPNYIMP 467
+ P Y G+MPP+ + G Q G+ P GP Y MP
Sbjct: 438 QFMPPMFY------GVMPPRGVPFNGPNPQQMNGVPPQQFRNGPMYGMP 480
>gi|443926079|gb|ELU44821.1| polyadenylate-binding protein [Rhizoctonia solani AG-1 IA]
Length = 593
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/437 (46%), Positives = 278/437 (63%), Gaps = 38/437 (8%)
Query: 19 AAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSN 78
AAVP SLYVG+L+ V+E+ L+++F+ + V S+RVCRD R SLGYAYVNY N
Sbjct: 168 AAVPQ---TASLYVGELDHTVSEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLN 224
Query: 79 PQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAA 138
D RDP++RK+G GN+FIKNLD +IDNKAL DTFAA
Sbjct: 225 AADG---------------------ERRDPALRKTGQGNIFIKNLDEAIDNKALHDTFAA 263
Query: 139 FGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA 198
FG VLSCKVA D G+S+GYG+V +E E+A+ AIK +N ML+NDKQV+VG + R+ER
Sbjct: 264 FGNVLSCKVATDETGKSRGYGYVHYETAESAEAAIKAVNRMLLNDKQVFVGHHISRKERQ 323
Query: 199 QQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQS 256
Q +FTN+YV NL +T+ + + +F FG ITSA++ D++GKSR FGFVN+++
Sbjct: 324 SQIDEARAQFTNIYVKNLDTDITEAEFRVMFEEFGNITSAVLQTDNEGKSRGFGFVNYEN 383
Query: 257 PDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
+ A AV +++ KV +VGRAQK++ER+++L E + R K G NLY+KN
Sbjct: 384 HEEAERAVNEMHEKEIKGKVLFVGRAQKKSERQSELARSHEAAKQERQNKYAGVNLYVKN 443
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
LDD ++D+KL+ F FGTITSCKVM ++ SKG GF FS P+EAT+A+ EMN KMIG
Sbjct: 444 LDDDVDDDKLRAEFEAFGTITSCKVMRNERDISKGFGFVCFSTPDEATKAVTEMNNKMIG 503
Query: 377 RKPLYVAVAQRKEERKARLQAQFAQ----------IRAPGGMSPLASGIPGYHHGAPRLG 426
KPLYV++AQR++ R+ +L+ Q Q + PG M P PG P+ G
Sbjct: 504 TKPLYVSLAQRRDVRRQQLEGQIMQRNQMRMQQAPMMGPGYMQPQMYYGPGPGGYPPQAG 563
Query: 427 PQQLYYGQGTPGLMPPQ 443
+ Y Q PG+MPP+
Sbjct: 564 RGVMGYPQ--PGMMPPR 578
>gi|330938161|ref|XP_003305701.1| hypothetical protein PTT_18612 [Pyrenophora teres f. teres 0-1]
gi|311317207|gb|EFQ86241.1| hypothetical protein PTT_18612 [Pyrenophora teres f. teres 0-1]
Length = 749
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/343 (53%), Positives = 243/343 (70%), Gaps = 2/343 (0%)
Query: 4 TGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQ 63
T AA V + T+AA + SLYVG+L+ +V E+ L++LFS + QV S+RVCRD
Sbjct: 24 TNVPAAQGEVPTPTSAAPAHNQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDA 83
Query: 64 SKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
R SLGYAYVNY++ +D A E LN+ I GKP RIM+S RDP++RK+G GNVFIKNL
Sbjct: 84 VTRRSLGYAYVNYNSSEDGEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNL 143
Query: 124 DTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND 183
D +IDNKAL DTFAAFG +LSCKVA D G SKGYGFV +E EAA NAIK +NGML+N+
Sbjct: 144 DHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNE 203
Query: 184 KQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD 241
K+V+VG + ++ER + + FTN+YV N+ V+D+D + +F G ITSA + +D
Sbjct: 204 KKVFVGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVSDDDFRDLFEKHGDITSASIARD 263
Query: 242 SDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERI 301
GKSR FGFVN+ +AA+AAV+ LN T + YVGRAQK+ ERE +LR ++E R+
Sbjct: 264 DQGKSRGFGFVNYIKHEAASAAVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAARL 323
Query: 302 SRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
+ K +G NLY+KNL+D ++DEKL+++F+ FGTITS KVM D
Sbjct: 324 EKQSKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVMRD 366
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 155/290 (53%), Gaps = 19/290 (6%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ LD S+ L + F++ G V S +V D+ +S GY +V + + E + A++
Sbjct: 49 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEE 108
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN +I K + ++ +R ++ NV++ NL + ++ L F FG I S
Sbjct: 109 LNYTVIKGKPCRI-MWSQRDPALRKTGQ---GNVFIKNLDHAIDNKALHDTFAAFGNILS 164
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V +D G S+ +GFV++++ +AA A++ +NG N+K +VG +
Sbjct: 165 CKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPK---------- 214
Query: 296 FEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSG 353
+ER+S++E++K N+Y+KN+D ++D+ ++LF + G ITS + D G S+G G
Sbjct: 215 --KERMSKFEEMKANFTNIYVKNIDLDVSDDDFRDLFEKHGDITSASIARDDQGKSRGFG 272
Query: 354 FAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
F + E A+ A++ +N + LYV AQ+K ER+ L+ Q+ R
Sbjct: 273 FVNYIKHEAASAAVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAAR 322
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 154/349 (44%), Gaps = 79/349 (22%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D+ S GY +V+Y + A
Sbjct: 133 TGQGNV--FIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNSK-GYGFVHYETAEAA 189
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIR--------KSGYGNVFIKNLDTSIDNKALCD 134
NA + +N M +N K ++ H P K+ + N+++KN+D + + D
Sbjct: 190 NNAIKHVNGMLLNEK--KVFVGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVSDDDFRD 247
Query: 135 TFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRR 194
F G + S +A D G+S+G+GFV + EAA A+ LN +++YVG ++
Sbjct: 248 LFEKHGDITSASIARDDQGKSRGFGFVNYIKHEAASAAVDALNDTDFRGQKLYVGRAQKK 307
Query: 195 QERAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
ER ++ K+ N+Y+ NL + V DE L+ +F FGTITSA VM+D+
Sbjct: 308 HEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVMRDA 367
Query: 243 ------------------------------------------------DGKSRCFG---- 250
G+ + G
Sbjct: 368 MPAAGSEDATDEKKDETKEETEKPEEAKDESKEDSDDKKDEKADKVTIKGEKKILGKSKG 427
Query: 251 --FVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
FV F +PD A AV ++N +K YV AQ++ R+ L A +
Sbjct: 428 FGFVCFSNPDEATKAVTEMNQKMIENKPLYVALAQRKDVRKNQLEATIQ 476
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 47/69 (68%)
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
SAL A+P + +MLGE LYP + ++P A K+TGMLLEMD +E+++L AL+ KV
Sbjct: 658 SALQGAAPGQQKQMLGEALYPKIAEMQPELAGKITGMLLEMDNSELINLTADEAALRAKV 717
Query: 611 AEAMAVLQE 619
EAM+V E
Sbjct: 718 DEAMSVYDE 726
>gi|378732913|gb|EHY59372.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 779
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/339 (53%), Positives = 242/339 (71%), Gaps = 6/339 (1%)
Query: 8 AATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRS 67
A+T S +TAA S SLYVG+L+ +V E+ L++LFS + QV S+RVCRD R
Sbjct: 45 ASTPYSASPSTAAQHS----ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRR 100
Query: 68 SLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSI 127
SLGYAYVNY+N D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLD +I
Sbjct: 101 SLGYAYVNYNNTADGERALEDLNYTSIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDAAI 160
Query: 128 DNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVY 187
DNKAL DTF+ FG +LSCKVA D G SKGYGFV +E EAA AIK +NGML+NDK+V+
Sbjct: 161 DNKALHDTFSQFGNILSCKVAQDELGNSKGYGFVHYETAEAANQAIKSVNGMLLNDKKVF 220
Query: 188 VGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK 245
VG + +++R + + FTNVY+ N+ E+V+DE+ K+F +G + SA + +D +GK
Sbjct: 221 VGHHIAKRDRQSKLEEMKANFTNVYIKNIDESVSDEEFTKLFEPYGEVVSATITRDENGK 280
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYE 305
SR FGFVNF S ++AA AVE+LN + K YVGRAQK+ ERE +LR ++E R+ +
Sbjct: 281 SRGFGFVNFASHESAAKAVEELNDKEFHGKKLYVGRAQKKHEREEELRRQYEAARMEKAS 340
Query: 306 KLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
K +G NLY+KNL D ++D+KL+ELFS +GTITS KVM D
Sbjct: 341 KYQGVNLYVKNLTDDVDDDKLRELFSSYGTITSAKVMRD 379
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 158/299 (52%), Gaps = 19/299 (6%)
Query: 108 PSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENE 166
PS ++++ LD S+ L + F++ G V S +V D+ +S GY +V + N
Sbjct: 53 PSTAAQHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 112
Query: 167 EAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKI 226
+ A++ LN I + + ++ +R ++ NV++ NL + ++ L
Sbjct: 113 ADGERALEDLNYTSIKGRPCRI-MWSQRDPALRKTGQ---GNVFIKNLDAAIDNKALHDT 168
Query: 227 FGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRA 286
F FG I S V +D G S+ +GFV++++ +AA A++ +NG NDK +VG +
Sbjct: 169 FSQFGNILSCKVAQDELGNSKGYGFVHYETAEAANQAIKSVNGMLLNDKKVFVGHHIAKR 228
Query: 287 EREADLRAKFEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
+R+ S+ E++K N+Y+KN+D+S++DE+ +LF +G + S + D
Sbjct: 229 DRQ------------SKLEEMKANFTNVYIKNIDESVSDEEFTKLFEPYGEVVSATITRD 276
Query: 345 QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
++G S+G GF F+ E A +A+ E+N K K LYV AQ+K ER+ L+ Q+ R
Sbjct: 277 ENGKSRGFGFVNFASHESAAKAVEELNDKEFHGKKLYVGRAQKKHEREEELRRQYEAAR 335
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 137/238 (57%), Gaps = 21/238 (8%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D FSQ ++S +V +D+ S GY +V+Y + A
Sbjct: 146 TGQGNV--FIKNLDAAIDNKALHDTFSQFGNILSCKVAQDELGNSK-GYGFVHYETAEAA 202
Query: 83 ANAKEALNFMPINGKPIRIMY--SHRDPSIR----KSGYGNVFIKNLDTSIDNKALCDTF 136
A +++N M +N K + + + + RD + K+ + NV+IKN+D S+ ++ F
Sbjct: 203 NQAIKSVNGMLLNDKKVFVGHHIAKRDRQSKLEEMKANFTNVYIKNIDESVSDEEFTKLF 262
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
+G V+S + D NG+S+G+GFV F + E+A A++ LN + K++YVG ++ E
Sbjct: 263 EPYGEVVSATITRDENGKSRGFGFVNFASHESAAKAVEELNDKEFHGKKLYVGRAQKKHE 322
Query: 197 R----------AQQNVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
R A+ + K+ N+YV NL + V D+ L+++F +GTITSA VM+DS
Sbjct: 323 REEELRRQYEAARMEKASKYQGVNLYVKNLTDDVDDDKLRELFSSYGTITSAKVMRDS 380
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 150/319 (47%), Gaps = 55/319 (17%)
Query: 347 GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQF-AQIRAP 405
G SKG GF FS P+EA++A++EMN KM+ KPLYVA+AQRK+ R+ +L+A A+
Sbjct: 440 GKSKGFGFVCFSNPDEASKAVSEMNQKMVNGKPLYVALAQRKDVRRNQLEASIQARNTLR 499
Query: 406 GGMSPLASGIP-GYHHGAPRLGPQQLYYGQ--------------GTPGLMPPQAAGYGFQ 450
A+G+P GY + P Y GQ G PG++ P G Q
Sbjct: 500 QQQQAAAAGMPQGY------IQPTVFYPGQQFLPPGAQRGMPFAGQPGMVIPGMQGGRGQ 553
Query: 451 QQVFPGLRPGG-----------PNYIMPYHLQRQVHPGQRTGV---------------RR 484
FPG P G PN+ +P + +P G+ R
Sbjct: 554 ---FPGGFPQGGRGIPQGQQLPPNFGLPGQMPFIQNPALVNGMYNNPQALAQMQGQMGRG 610
Query: 485 SGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVP- 543
+G QMQ Q M + QG+ + N M +P P + +P
Sbjct: 611 AGGRGQMQGMQGMPPNMQGMGGMRGGPNFPQGGRGGMQNIPGGQGAGRIPPQGRGQMIPN 670
Query: 544 -VPISTLTSA--LASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLI 600
I+T +S LAS + ++LGE +YP ++ I+P A K+TGMLLEMD +E+L L+
Sbjct: 671 REEINTPSSLHNLASLPQSQQKQILGEAIYPKIQQIQPELAGKITGMLLEMDNSELLSLV 730
Query: 601 ESPEALKTKVAEAMAVLQE 619
+ AL++KV EA+ V +
Sbjct: 731 DDDAALRSKVDEALRVYDD 749
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
GKS+ FGFV F +PD A+ AV ++N N K YV AQ++ R L A +
Sbjct: 440 GKSKGFGFVCFSNPDEASKAVSEMNQKMVNGKPLYVALAQRKDVRRNQLEASIQ 493
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 153 GQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
G+SKG+GFV F N + A A+ +N ++N K +YV L R+ R Q
Sbjct: 440 GKSKGFGFVCFSNPDEASKAVSEMNQKMVNGKPLYVALAQRKDVRRNQ 487
>gi|335293857|ref|XP_003357073.1| PREDICTED: polyadenylate-binding protein 4-like [Sus scrofa]
Length = 370
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/369 (50%), Positives = 255/369 (69%), Gaps = 4/369 (1%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
+ + Y SLYVGDL +V E L+ FS V V+S+R+CRD R SLGYAYVN+
Sbjct: 3 IAAKYRQASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLA 62
Query: 81 DAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
DA A + +NF I GK IR+M+S RD +RKSG GNVFIKNLD SIDNK L + F+AFG
Sbjct: 63 DAQKALDTMNFDLIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSAFG 122
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ- 199
+LS KV D G S+GY FV F+N+ AA AI+ +NG L+ D +++VG F R++R
Sbjct: 123 KILSSKVMSDDQG-SRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKNRKDREAE 181
Query: 200 -QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
QN + +FTNVY+ N + + DE LK++F +G S VM+DS GKS+ FGFV+F S +
Sbjct: 182 LQNKANEFTNVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMRDSSGKSKGFGFVSFDSHE 241
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
AA AVE++NG N ++ +VGRAQK+AER+A+L+ FEQ + R+ + +G LY+KNLD
Sbjct: 242 AAKKAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQLKRERFRRCQGVKLYIKNLD 301
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
++I+DEKL+ FS FG+I+ KVM + G SKG G FS PEEAT+A+ EMNG+++G K
Sbjct: 302 ETIDDEKLRREFSSFGSISRVKVM-QEEGRSKGFGLICFSSPEEATKAMTEMNGRILGSK 360
Query: 379 PLYVAVAQR 387
PL +A+AQ+
Sbjct: 361 PLNIALAQK 369
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 161/288 (55%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L F+ G VLS ++ D +S GY +V F AQ A+
Sbjct: 11 SLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDT 70
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N LI K + + ++ +R ++ NV++ NL +++ ++ L + F FG I S
Sbjct: 71 MNFDLIKGKSIRL-MWSQRDAYLRK---SGIGNVFIKNLDKSIDNKTLYEHFSAFGKILS 126
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ VM D G SR + FV+FQ+ AA A+E++NG D +VGR + R +REA+L+ K
Sbjct: 127 SKVMSDDQG-SRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKNRKDREAELQNK 185
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ N+Y+KN D ++DE+LKE+FS++G S KVM D G SKG GF
Sbjct: 186 ANE----------FTNVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMRDSSGKSKGFGFV 235
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+F E A +A+ EMNGK I + L+V AQ+K ER+A L+ F Q++
Sbjct: 236 SFDSHEAAKKAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQLK 283
>gi|74189486|dbj|BAE22747.1| unnamed protein product [Mus musculus]
Length = 590
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/318 (59%), Positives = 238/318 (74%), Gaps = 10/318 (3%)
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF + GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AFG +LSCKV
Sbjct: 1 MNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVV 60
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER + + +F
Sbjct: 61 CDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEF 119
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVY+ N E V D +LK++F FG S VM+DS GKS+ FGFV+++ + A AVE+
Sbjct: 120 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEE 179
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ---ERISRYEKLKGANLYLKNLDDSIND 323
+NG + K +VGRAQK+ ER+A+L+ KFEQ ERISRY+ G NLY+KNLDD+I+D
Sbjct: 180 MNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYIKNLDDTIDD 236
Query: 324 EKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVA 383
EKL+ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++G KPLYVA
Sbjct: 237 EKLRREFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVA 295
Query: 384 VAQRKEERKARLQAQFAQ 401
+AQRKEERKA L Q+ Q
Sbjct: 296 LAQRKEERKAHLTNQYMQ 313
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 168/295 (56%), Gaps = 25/295 (8%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GNV ++ +L+++++ LYD FS ++S +V D++ S GYA+V++ + A
Sbjct: 25 SGVGNV--FIKNLDESIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYAFVHFETQEAA 80
Query: 83 ANAKEALNFMPINGKPIRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDTF 136
A E +N M +N + + + R+ + + + NV+IKN +D+ L + F
Sbjct: 81 DKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELF 140
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
+ FG LS KV DS+G+SKG+GFV +E E A A++ +NG ++ K ++VG ++ E
Sbjct: 141 SQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVE 200
Query: 197 RAQQNVSPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
R Q + KF N+Y+ NL +T+ DE L++ F FG+ITSA VM + D
Sbjct: 201 R-QAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLE-D 258
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
G+S+ FGFV F SP+ A AV ++NG K YV AQ++ ER+A L ++ Q
Sbjct: 259 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQ 313
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 110/204 (53%), Gaps = 23/204 (11%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + + V++ L +LFSQ + +SV+V RD S +S G+ +V+Y +DA A E
Sbjct: 120 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSK-GFGFVSYEKHEDANKAVE 178
Query: 88 ALNFMPINGKPI----------------RIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
+N ++GK I R + I + N++IKNLD +ID++
Sbjct: 179 EMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 238
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L F+ FG++ S KV ++ +G+SKG+GFV F + E A A+ +NG ++ K +YV L
Sbjct: 239 LRREFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 297
Query: 192 VRRQERAQQNVSPKFTNVYVNNLA 215
R++ER TN Y+ +A
Sbjct: 298 QRKEERKAH-----LTNQYMQRVA 316
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 83/119 (69%), Gaps = 8/119 (6%)
Query: 522 VPVPFEVSGMPAT-PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVEN 575
V + + +PA P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++
Sbjct: 470 VRLQLSAAALPAIQPLQAPQPAVQVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQT 527
Query: 576 IEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
+ A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 528 MHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGTVA 586
>gi|334349575|ref|XP_003342221.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 707
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/325 (56%), Positives = 235/325 (72%), Gaps = 4/325 (1%)
Query: 79 PQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAA 138
P DA A E +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+A
Sbjct: 131 PADAERALETMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALFDTFSA 190
Query: 139 FGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA 198
FG +LSCKV D +G SKGYGFV FE +AA+ AI +NGML+ND++V+VG F R+ER
Sbjct: 191 FGNILSCKVVCDEHG-SKGYGFVHFETRDAAERAIDKMNGMLLNDRKVFVGRFKSRKERE 249
Query: 199 QQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQS 256
+ + +FTNVY+ N E + D LK++FG FG S VM D G S+ FGFVNF+
Sbjct: 250 AELGARAKEFTNVYIKNFGEDMDDLRLKRLFGKFGPALSVKVMTDESGTSKGFGFVNFER 309
Query: 257 PDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
+ A AVE++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KN
Sbjct: 310 HEDAQKAVEEMNGKELNGKKIYVGRAQKKGERQTELKRKFEQLKQDRITRYQGVNLYVKN 369
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
LDD I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++
Sbjct: 370 LDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVA 428
Query: 377 RKPLYVAVAQRKEERKARLQAQFAQ 401
KPLY+A+AQRKEER+A L Q+ Q
Sbjct: 429 TKPLYIALAQRKEERQAHLTNQYMQ 453
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 109/205 (53%), Gaps = 25/205 (12%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + +++++ +L LF + +SV+V D+S +S G+ +VN+ +DA A E
Sbjct: 260 TNVYIKNFGEDMDDLRLKRLFGKFGPALSVKVMTDESG-TSKGFGFVNFERHEDAQKAVE 318
Query: 88 ALNFMPINGKPIRIMYSHR-----------------DPSIRKSGYGNVFIKNLDTSIDNK 130
+N +NGK I + + + D R G N+++KNLD ID++
Sbjct: 319 EMNGKELNGKKIYVGRAQKKGERQTELKRKFEQLKQDRITRYQGV-NLYVKNLDDGIDDE 377
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L F+ FGT+ S KV ++ G+SKG+GFV F + E A A+ +NG ++ K +Y+ L
Sbjct: 378 RLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYIAL 436
Query: 191 FVRRQERAQQNVSPKFTNVYVNNLA 215
R++ER TN Y+ +A
Sbjct: 437 AQRKEERQAH-----LTNQYMQRMA 456
>gi|118486179|gb|ABK94932.1| unknown [Populus trichocarpa]
Length = 408
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/413 (53%), Positives = 281/413 (68%), Gaps = 23/413 (5%)
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
M+D DGKSRCFGFVNF++ D AA A E LNG +DK W+VG+AQK+ ERE +L+ +FEQ
Sbjct: 1 MRDGDGKSRCFGFVNFENADDAAKAAEALNGKKFDDKEWFVGKAQKKYEREVELKQRFEQ 60
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
+K +GANLY+KNLDDSI DEK+KELFS FGTITSCKVM D +G S+GSGF AFS
Sbjct: 61 SMKEAADKFQGANLYIKNLDDSIGDEKIKELFSPFGTITSCKVMRDPNGISRGSGFVAFS 120
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGY 418
PEEA+RAL EMNGKM+ KPLYVA+AQRKE+R+ARLQAQF+Q+R P M+P +P Y
Sbjct: 121 TPEEASRALLEMNGKMVASKPLYVALAQRKEDRRARLQAQFSQMR-PVAMAPSVGRMPMY 179
Query: 419 HHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGG---PNYIMPY---HLQR 472
P LG QQ++YGQG P +MPPQ G+G+QQQ+ PG+RPGG PN+ +P Q
Sbjct: 180 PPTGPGLG-QQIFYGQGPPAIMPPQ-PGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQG 237
Query: 473 QVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVV----SMVPVPFEV 528
Q G+R G + Q M + RY R D + M+ VP+++
Sbjct: 238 QRPGGRRAGTGQQSQQPVQLMQQQMLPRGRVYRY-PPGRGLPDVPMTGVAGGMLSVPYDM 296
Query: 529 SGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGML 588
GMP + P+PI L +ALA+A+PD + MLGE LYPLVE +EP A+KVTGML
Sbjct: 297 GGMPMRDAALSQ--PIPIGALATALANATPDQQRTMLGENLYPLVEQLEPEAAAKVTGML 354
Query: 589 LEMDQTEVLHLIESPEALKTKVAEAMAVL----QEAAARSDVNEKLGSLAVNE 637
LEMDQTEVLHL+ESPEALK+KV EAM VL Q+A +D +L SL++N+
Sbjct: 355 LEMDQTEVLHLLESPEALKSKVNEAMEVLRTVQQQATGTAD---QLASLSLND 404
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 12/163 (7%)
Query: 150 DSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER----------AQ 199
D +G+S+ +GFV FEN + A A + LNG +DK+ +VG ++ ER +
Sbjct: 3 DGDGKSRCFGFVNFENADDAAKAAEALNGKKFDDKEWFVGKAQKKYEREVELKQRFEQSM 62
Query: 200 QNVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + KF N+Y+ NL +++ DE +K++F FGTITS VM+D +G SR GFV F +P
Sbjct: 63 KEAADKFQGANLYIKNLDDSIGDEKIKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTP 122
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQER 300
+ A+ A+ ++NG K YV AQ++ +R A L+A+F Q R
Sbjct: 123 EEASRALLEMNGKMVASKPLYVALAQRKEDRRARLQAQFSQMR 165
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N++IKNLD SI ++ + + F+ FGT+ SCKV D NG S+G GFV F E A A+ +
Sbjct: 73 NLYIKNLDDSIGDEKIKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALLEM 132
Query: 177 NGMLINDKQVYVGLFVRRQER 197
NG ++ K +YV L R+++R
Sbjct: 133 NGKMVASKPLYVALAQRKEDR 153
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ +LY+ +L+ ++ + ++ +LFS + S +V RD + S G +V +S P++A+
Sbjct: 69 FQGANLYIKNLDDSIGDEKIKELFSPFGTITSCKVMRDPNGISR-GSGFVAFSTPEEASR 127
Query: 85 AKEALNFMPINGKPIRIMYSHR 106
A +N + KP+ + + R
Sbjct: 128 ALLEMNGKMVASKPLYVALAQR 149
>gi|13435438|gb|AAH04587.1| Pabpc1 protein [Mus musculus]
Length = 527
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 234/546 (42%), Positives = 319/546 (58%), Gaps = 64/546 (11%)
Query: 127 IDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQV 186
IDNKAL DTF+AFG +LSCKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V
Sbjct: 1 IDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKV 59
Query: 187 YVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG 244
+VG F R+ER + + +FTNVY+ N E + DE LK++FG FG S VM D G
Sbjct: 60 FVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESG 119
Query: 245 KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRY 304
KS+ FGFV+F+ + A AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R
Sbjct: 120 KSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRI 179
Query: 305 EKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEAT 364
+ +G NLY+KNLDD I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT
Sbjct: 180 TRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEAT 238
Query: 365 RALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ----IRA-------------PGG 407
+A+ EMNG+++ KPLYVA+AQRKEER+A L Q+ Q +RA P G
Sbjct: 239 KAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSG 298
Query: 408 MSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIM 466
+ IP + A P Q+ + +P A + FQ PG +RP P
Sbjct: 299 Y--FMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--P 352
Query: 467 PYHLQRQVH---PGQRTGVRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNG 513
P+ R P + R + + Q P+ +R Q +Y RN
Sbjct: 353 PFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNP 411
Query: 514 TD----QSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQL 569
Q V+M PA V+ P+ S LA A P ++ +MLGE+L
Sbjct: 412 QQHLNAQPQVTM--------QQPAVHVQGQEPL------TASMLAFAPPQEQKQMLGERL 457
Query: 570 YPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSD 625
+PL++ + P A K+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+
Sbjct: 458 FPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKA 517
Query: 626 VNEKLG 631
VN G
Sbjct: 518 VNSATG 523
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 154/283 (54%), Gaps = 23/283 (8%)
Query: 39 VNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKP 98
++ LYD FS ++S +V D++ S GY +V++ + A A E +N M +N +
Sbjct: 1 IDNKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAAERAIEKMNGMLLNDRK 58
Query: 99 IRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSN 152
+ + R+ + R + NV+IKN +D++ L + F FG LS KV D +
Sbjct: 59 VFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDES 118
Query: 153 GQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF------ 206
G+SKG+GFV FE E AQ A+ +NG +N KQ+YVG ++ ER Q + KF
Sbjct: 119 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVER-QTELKRKFEQMKQD 177
Query: 207 -------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDA 259
N+YV NL + + DE L+K F FGTITSA VM + G+S+ FGFV F SP+
Sbjct: 178 RITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEE 236
Query: 260 AAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
A AV ++NG K YV AQ++ ER+A L ++ Q S
Sbjct: 237 ATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMAS 279
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 110/205 (53%), Gaps = 25/205 (12%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + +++++ +L +LF + +SV+V D+S +S G+ +V++ +DA A +
Sbjct: 82 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 140
Query: 88 ALNFMPINGKPIRIMYSHR-----------------DPSIRKSGYGNVFIKNLDTSIDNK 130
+N +NGK I + + + D R G N+++KNLD ID++
Sbjct: 141 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDE 199
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L F+ FGT+ S KV ++ G+SKG+GFV F + E A A+ +NG ++ K +YV L
Sbjct: 200 RLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 258
Query: 191 FVRRQERAQQNVSPKFTNVYVNNLA 215
R++ER TN Y+ +A
Sbjct: 259 AQRKEERQAH-----LTNQYMQRMA 278
>gi|407920118|gb|EKG13336.1| hypothetical protein MPH_09618 [Macrophomina phaseolina MS6]
Length = 768
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/351 (54%), Positives = 250/351 (71%), Gaps = 16/351 (4%)
Query: 3 ATGAAAATAAVTSATTAAVPSGYGN-VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCR 61
+ G+A AT A T T+A PS + N SLYVG+L+ +V E+ L++LFS + QV S+RVCR
Sbjct: 33 SAGSAGATEAPTP--TSAAPSAHQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCR 90
Query: 62 DQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIK 121
D R SLGYAYVNY++ D A E LN+ I GKP RIM+S RDP++RK+G GNVFIK
Sbjct: 91 DAVTRRSLGYAYVNYNSSDDGEKALEELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIK 150
Query: 122 NLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLI 181
NLD +IDNKAL DTFAAFG +LSCKVA D NG SKGYGFV +E EAA NAIK +NGML+
Sbjct: 151 NLDGAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETAEAANNAIKAVNGMLL 210
Query: 182 NDKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVM 239
N+K+V+VG + +++R + + FTNVYV N+ VTD++ +++F +G ITSA +
Sbjct: 211 NEKKVFVGHHIPKKDRMSKFEEMKANFTNVYVKNIDLEVTDDEFRELFEKYGQITSASLA 270
Query: 240 KDSD-GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVW-----YVGRAQKRAEREADLR 293
D++ GKSR FGFVNF ++AA AV++L NDK W YVGRAQK+ ERE +LR
Sbjct: 271 HDNETGKSRGFGFVNFVKHESAAKAVDEL-----NDKDWKGQKLYVGRAQKKHEREEELR 325
Query: 294 AKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
++E R + K +G NLY+KNL D ++DEKL+++F+ FGTITS KVM D
Sbjct: 326 KQYEAARAEKQSKYQGVNLYVKNLHDDVDDEKLRDMFAPFGTITSAKVMRD 376
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 161/292 (55%), Gaps = 20/292 (6%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ LD S+ L + F++ G V S +V D+ +S GY +V + + + + A++
Sbjct: 58 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSDDGEKALEE 117
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN LI K + ++ +R ++ NV++ NL + ++ L F FG I S
Sbjct: 118 LNYTLIKGKPCRI-MWSQRDPALRKTGQ---GNVFIKNLDGAIDNKALHDTFAAFGNILS 173
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V +D +G S+ +GFV++++ +AA A++ +NG N+K +VG +
Sbjct: 174 CKVAQDENGNSKGYGFVHYETAEAANNAIKAVNGMLLNEKKVFVGHHIPK---------- 223
Query: 296 FEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD-QHGFSKGS 352
++R+S++E++K N+Y+KN+D + D++ +ELF ++G ITS + D + G S+G
Sbjct: 224 --KDRMSKFEEMKANFTNVYVKNIDLEVTDDEFRELFEKYGQITSASLAHDNETGKSRGF 281
Query: 353 GFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRA 404
GF F E A +A++E+N K + LYV AQ+K ER+ L+ Q+ RA
Sbjct: 282 GFVNFVKHESAAKAVDELNDKDWKGQKLYVGRAQKKHEREEELRKQYEAARA 333
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 129/241 (53%), Gaps = 26/241 (10%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D++ S GY +V+Y + A
Sbjct: 142 TGQGNV--FIKNLDGAIDNKALHDTFAAFGNILSCKVAQDENGNSK-GYGFVHYETAEAA 198
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIR--------KSGYGNVFIKNLDTSIDNKALCD 134
NA +A+N M +N K ++ H P K+ + NV++KN+D + + +
Sbjct: 199 NNAIKAVNGMLLNEK--KVFVGHHIPKKDRMSKFEEMKANFTNVYVKNIDLEVTDDEFRE 256
Query: 135 TFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVR 193
F +G + S +A D+ G+S+G+GFV F E+A A+ LN +++YVG +
Sbjct: 257 LFEKYGQITSASLAHDNETGKSRGFGFVNFVKHESAAKAVDELNDKDWKGQKLYVGRAQK 316
Query: 194 RQER------------AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD 241
+ ER A++ + N+YV NL + V DE L+ +F FGTITSA VM+D
Sbjct: 317 KHEREEELRKQYEAARAEKQSKYQGVNLYVKNLHDDVDDEKLRDMFAPFGTITSAKVMRD 376
Query: 242 S 242
+
Sbjct: 377 T 377
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 116/337 (34%), Positives = 154/337 (45%), Gaps = 47/337 (13%)
Query: 319 DSINDEKLKELFSEFGTIT---SCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI 375
D N + + +L E +T K++ G SKG GF FS P+EAT+A+ EMN KM+
Sbjct: 413 DEENKDGVDKLTKEMDKVTIKGEQKIL----GKSKGFGFVCFSNPDEATKAVTEMNQKMM 468
Query: 376 GRKPLYVAVAQRKEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGAPRL----GPQ 428
KPLYVA+AQRK+ RK++L+A QIR + A+G+P P++ G Q
Sbjct: 469 NGKPLYVALAQRKDVRKSQLEATIQARNQIRM--QQAAAAAGMPTQQFVQPQMFFGPGQQ 526
Query: 429 QLYYGQGT---PGLMPPQAAGYGFQQQV--------------------FPGL-RPGG-PN 463
G+G P MP G GF Q + FPG PGG P
Sbjct: 527 PFMGGRGQMPFPQGMPAGGRGAGFPQGMPMQGGRGGPNAQQIPPMGMPFPGAPLPGGIPP 586
Query: 464 YIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVP 523
P + Q G R P + N R G + +
Sbjct: 587 QYNPAYAQMLAAQQAAMGGRGGSRGPMPGMPGMPGMPQMAGQIPANNRGGPNNRGGANRN 646
Query: 524 VPFEVSGMPATPVETPRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHAS 582
P SG PA P P P + SAL SA+P + +MLGE LYP + ++P A
Sbjct: 647 QPGFPSGRPA-----PGQAPTPGEGVDLSALQSAAPPQQKQMLGEALYPKIHAMQPELAG 701
Query: 583 KVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
K+TGMLLEMD TE+++L AL+ KV EAM V QE
Sbjct: 702 KITGMLLEMDNTELINLTSDENALRAKVDEAMGVYQE 738
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
GKS+ FGFV F +PD A AV ++N N K YV AQ++ R++ L A +
Sbjct: 440 GKSKGFGFVCFSNPDEATKAVTEMNQKMMNGKPLYVALAQRKDVRKSQLEATIQ 493
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 153 GQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
G+SKG+GFV F N + A A+ +N ++N K +YV L R+ R Q
Sbjct: 440 GKSKGFGFVCFSNPDEATKAVTEMNQKMMNGKPLYVALAQRKDVRKSQ 487
>gi|396492663|ref|XP_003843853.1| hypothetical protein LEMA_P015040.1 [Leptosphaeria maculans JN3]
gi|312220433|emb|CBY00374.1| hypothetical protein LEMA_P015040.1 [Leptosphaeria maculans JN3]
Length = 747
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/339 (53%), Positives = 240/339 (70%), Gaps = 2/339 (0%)
Query: 8 AATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRS 67
AT T A + + SLYVG+L+ +V E+ L++LFS + QV S+RVCRD R
Sbjct: 27 GATQGEAPTPTTAQQAHQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRR 86
Query: 68 SLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSI 127
SLGYAYVNY++ +D A E LN+ I GKP RIM+S RDP++RK+G GNVFIKNLD +I
Sbjct: 87 SLGYAYVNYNSSEDGEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAI 146
Query: 128 DNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVY 187
DNKAL DTFAAFG +LSCKVA D +G SKGYGFV +E EAA NAIK +NGML+N+K+V+
Sbjct: 147 DNKALHDTFAAFGNILSCKVAQDEHGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVF 206
Query: 188 VGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK 245
VG + ++ER + + FTN+YV N+ VTD++ + +F G ITSA + +D GK
Sbjct: 207 VGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVTDDEFRDLFEKHGDITSASIARDDQGK 266
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYE 305
SR FGFVN+ +AA+ AVE LN T + + YVGRAQK+ ERE +LR ++E R+ +
Sbjct: 267 SRGFGFVNYIKHEAASVAVETLNDTEFHGQKLYVGRAQKKHEREEELRKQYEAARLEKQS 326
Query: 306 KLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
K +G NLY+KNL+D ++DEKL+++F+ FGTITS KVM D
Sbjct: 327 KYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVMRD 365
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 154/290 (53%), Gaps = 19/290 (6%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ LD S+ L + F++ G V S +V D+ +S GY +V + + E + A++
Sbjct: 48 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEE 107
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN +I K + ++ +R ++ NV++ NL + ++ L F FG I S
Sbjct: 108 LNYTVIKGKPCRI-MWSQRDPALRKTGQ---GNVFIKNLDHAIDNKALHDTFAAFGNILS 163
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V +D G S+ +GFV++++ +AA A++ +NG N+K +VG +
Sbjct: 164 CKVAQDEHGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPK---------- 213
Query: 296 FEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSG 353
+ER+S++E++K N+Y+KN+D + D++ ++LF + G ITS + D G S+G G
Sbjct: 214 --KERMSKFEEMKANFTNIYVKNIDLDVTDDEFRDLFEKHGDITSASIARDDQGKSRGFG 271
Query: 354 FAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
F + E A+ A+ +N + LYV AQ+K ER+ L+ Q+ R
Sbjct: 272 FVNYIKHEAASVAVETLNDTEFHGQKLYVGRAQKKHEREEELRKQYEAAR 321
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 155/351 (44%), Gaps = 81/351 (23%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D+ S GY +V+Y + A
Sbjct: 132 TGQGNV--FIKNLDHAIDNKALHDTFAAFGNILSCKVAQDEHGNSK-GYGFVHYETAEAA 188
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIR--------KSGYGNVFIKNLDTSIDNKALCD 134
NA + +N M +N K ++ H P K+ + N+++KN+D + + D
Sbjct: 189 NNAIKHVNGMLLNEK--KVFVGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVTDDEFRD 246
Query: 135 TFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRR 194
F G + S +A D G+S+G+GFV + EAA A++ LN + +++YVG ++
Sbjct: 247 LFEKHGDITSASIARDDQGKSRGFGFVNYIKHEAASVAVETLNDTEFHGQKLYVGRAQKK 306
Query: 195 QERAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
ER ++ K+ N+Y+ NL + V DE L+ +F FGTITSA VM+D+
Sbjct: 307 HEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVMRDA 366
Query: 243 --------------------------------------------------DGKSRCFG-- 250
G+ + G
Sbjct: 367 MPADRSDSPSDKKEEEKDGKEESKETEGEAKEDSTDDKKEDTKAGDKVTIKGEKKILGKS 426
Query: 251 ----FVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
FV F +PD A AV ++N K YV AQ++ R+ L A +
Sbjct: 427 KGFGFVCFSNPDEATKAVTEMNQKMLEGKPLYVALAQRKDVRKNQLEATIQ 477
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 109/211 (51%), Gaps = 24/211 (11%)
Query: 196 ERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNF 254
++A QN + ++YV L +VT+ L ++F G + S V +D+ +S + +VN+
Sbjct: 40 QQAHQNSA----SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNY 95
Query: 255 QSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYL 314
S + A+E+LN T K + +Q R+ LR K N+++
Sbjct: 96 NSSEDGEKALEELNYTVIKGKPCRIMWSQ----RDPALR------------KTGQGNVFI 139
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLD +I+++ L + F+ FG I SCKV D+HG SKG GF + E A A+ +NG +
Sbjct: 140 KNLDHAIDNKALHDTFAAFGNILSCKVAQDEHGNSKGYGFVHYETAEAANNAIKHVNGML 199
Query: 375 IGRKPLYVAVAQRKEERKAR---LQAQFAQI 402
+ K ++V K+ER ++ ++A F I
Sbjct: 200 LNEKKVFVGHHIPKKERMSKFEEMKANFTNI 230
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%)
Query: 552 ALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVA 611
AL+SA P + +MLGE LYP + ++P A K+TGMLLEMD +E+++L AL+ KV
Sbjct: 657 ALSSAPPGQQKQMLGEALYPKIHEMQPEFAGKITGMLLEMDNSELINLTSDEAALRAKVE 716
Query: 612 EAMAVLQE 619
EAM+V E
Sbjct: 717 EAMSVYDE 724
>gi|419961|pir||JN0573 polyadenylate-binding protein - fruit fly (Drosophila melanogaster)
Length = 598
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/380 (54%), Positives = 261/380 (68%), Gaps = 21/380 (5%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL Q+VNES L+D FS V+ RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVI--RVCRDVITRRSLGYAYVNFQQPADAERALDT 60
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+N + KPIRIM+S RDPS+R+SG GNVFIKNLD + NKA+ DTF+AFG +LSCKVA
Sbjct: 61 MNL--VRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRA--NKAIYDTFSAFGNILSCKVA 116
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
D G SKGYGFV EEAA +I +NGML+N K+VYVG F+ R+E Q+ + FTN
Sbjct: 117 TDEKGNSKGYGFVH--TEEAANTSIDKVNGMLLNGKKVYVGKFIPRKE--QEEKAKLFTN 172
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
VYV N E DE LK+ F +G IT VM DGKS+ FGFV F++ +AA AAV+ LN
Sbjct: 173 VYVKNFTEDFDDEKLKEFFEPYGKITK--VMSKEDGKSKGFGFVAFETTEAAEAAVQALN 230
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G K YV RAQK+AER+ +L+ KFE+ + R+E G NLY+KNLDD+I+D++L+
Sbjct: 231 G-KGEGKSLYVARAQKKAERQQELKRKFEELKQKRHE--FGVNLYVKNLDDTIDDDRLRI 287
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRK 388
FS +G ITS K VD+ G SKG GF F+ EAT A+ E+NG+++G LYVA+AQRK
Sbjct: 288 AFSPYGNITSAK--VDEEGRSKGFGFVCFNPESEATCAVTELNGRVVG--SLYVALAQRK 343
Query: 389 EERKARLQAQFAQIRAPGGM 408
EERKA L +Q+ +R GM
Sbjct: 344 EERKADLASQY--MRHMTGM 361
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFG-TITSCKVMVDQHGFSKGSGFAAFSMPEEATRALN 368
A+LY+ +L +N+ L + FS G I C+ ++ + S G + F P +A RAL+
Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPVIRVCRDVITRR--SLGYAYVNFQQPADAERALD 59
Query: 369 EMNGKMIGRKPLYVAVAQR 387
MN ++ KP+ + +QR
Sbjct: 60 TMN--LVRNKPIRIMWSQR 76
>gi|297263480|ref|XP_001096930.2| PREDICTED: polyadenylate-binding protein 3 [Macaca mulatta]
Length = 592
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 237/323 (73%), Gaps = 4/323 (1%)
Query: 81 DAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
DA A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG
Sbjct: 109 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 168
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
+LSCKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 169 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 227
Query: 201 --NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
+ +FTNVY+ N E + DE LK +FG FG S V+ D GKS+ FGFV+F+ +
Sbjct: 228 LGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVVTDESGKSKGFGFVSFERHE 287
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
A AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLD
Sbjct: 288 DARKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 347
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
D I+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ K
Sbjct: 348 DGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 406
Query: 379 PLYVAVAQRKEERKARLQAQFAQ 401
PLYVA+AQRKEER+A L Q+ Q
Sbjct: 407 PLYVALAQRKEERQAHLTNQYMQ 429
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 166/299 (55%), Gaps = 25/299 (8%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ ++ +L+++++ LYD FS ++S +V D++ S GY +V++ + A
Sbjct: 141 SGVGNI--FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAA 196
Query: 83 ANAKEALNFMPINGKPIRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDTF 136
A E +N M +N + + + R+ + R + NV+IKN +D++ L D F
Sbjct: 197 ERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLF 256
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG LS KV D +G+SKG+GFV FE E A+ A+ +NG +N KQ+YVG ++ E
Sbjct: 257 GKFGPALSVKVVTDESGKSKGFGFVSFERHEDARKAVDEMNGKELNGKQIYVGRAQKKVE 316
Query: 197 RAQQNVSPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
R Q + KF N+YV NL + + DE L+K F FGTITSA VM +
Sbjct: 317 R-QTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG- 374
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
G+S+ FGFV F SP+ A AV ++NG K YV AQ++ ER+A L ++ Q S
Sbjct: 375 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMAS 433
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 140/235 (59%), Gaps = 15/235 (6%)
Query: 169 AQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFG 228
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L F
Sbjct: 110 AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYDTFS 165
Query: 229 HFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAER 288
FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R ER
Sbjct: 166 AFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKER 224
Query: 289 EADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGF 348
EA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KV+ D+ G
Sbjct: 225 EAELGARAKE----------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVVTDESGK 274
Query: 349 SKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 275 SKGFGFVSFERHEDARKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 329
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 65/92 (70%), Gaps = 6/92 (6%)
Query: 532 PATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEM 591
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TGMLLE+
Sbjct: 491 PAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEI 544
Query: 592 DQTEVLHLIESPEALKTKVAEAMAVLQEAAAR 623
D +E+LH++ESPE+L++KV EA+AVLQ A+
Sbjct: 545 DNSELLHMLESPESLRSKVDEAVAVLQAHQAK 576
>gi|425772940|gb|EKV11320.1| Polyadenylate-binding protein [Penicillium digitatum PHI26]
gi|425781989|gb|EKV19920.1| Polyadenylate-binding protein [Penicillium digitatum Pd1]
Length = 736
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/359 (51%), Positives = 241/359 (67%), Gaps = 21/359 (5%)
Query: 7 AAATAAVTSATTAAVPSGYG-------------------NVSLYVGDLEQNVNESQLYDL 47
A TA VT AAVP G + SLYVG+L+ +V E+ LY+L
Sbjct: 5 APTTAPVTDNVVAAVPEANGAPVEATSEAAGDAANNQPHSASLYVGELDPSVTEAMLYEL 64
Query: 48 FSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRD 107
FS + QV S+RVCRD R SLGYAYVNY+N D A E LN+ I GKP RIM+S RD
Sbjct: 65 FSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRD 124
Query: 108 PSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEE 167
P++RK+G GNVFIKNLD +IDNKAL DTFAAFG +LSCKVA D SKGYGFV +E E
Sbjct: 125 PALRKTGQGNVFIKNLDNAIDNKALHDTFAAFGNILSCKVAQDEFANSKGYGFVHYETAE 184
Query: 168 AAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKK 225
AA NAIK +NGML+NDK+V+VG + +++R + + FTN+Y+ N+ +TD++ +
Sbjct: 185 AANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNIYIKNIDLEITDDEFRV 244
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
+F FG ITSA + D DGKSR FGFVN+ + ++A AAV ++N + YVGRAQK+
Sbjct: 245 MFEAFGEITSATLSHDQDGKSRGFGFVNYANHESAEAAVAEMNEKEVKTQKLYVGRAQKK 304
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
ERE +LR ++E R+ + K +G NLY+KNL D I+DEKL++LF+ +GTITS KVM D
Sbjct: 305 HEREEELRKQYEAARMEKASKYQGVNLYVKNLTDDIDDEKLRDLFTPYGTITSAKVMRD 363
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 154/290 (53%), Gaps = 19/290 (6%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ LD S+ L + F++ G V S +V D+ +S GY +V + N + A++
Sbjct: 46 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 105
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN LI K + ++ +R ++ NV++ NL + ++ L F FG I S
Sbjct: 106 LNYTLIKGKPCRI-MWSQRDPALRKTGQ---GNVFIKNLDNAIDNKALHDTFAAFGNILS 161
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V +D S+ +GFV++++ +AA A++ +NG NDK +VG + +R+
Sbjct: 162 CKVAQDEFANSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQ------ 215
Query: 296 FEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSG 353
S++E++K N+Y+KN+D I D++ + +F FG ITS + DQ G S+G G
Sbjct: 216 ------SKFEEMKANFTNIYIKNIDLEITDDEFRVMFEAFGEITSATLSHDQDGKSRGFG 269
Query: 354 FAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
F ++ E A A+ EMN K + + LYV AQ+K ER+ L+ Q+ R
Sbjct: 270 FVNYANHESAEAAVAEMNEKEVKTQKLYVGRAQKKHEREEELRKQYEAAR 319
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 166/356 (46%), Gaps = 78/356 (21%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D+ S GY +V+Y + A
Sbjct: 130 TGQGNV--FIKNLDNAIDNKALHDTFAAFGNILSCKVAQDEFANSK-GYGFVHYETAEAA 186
Query: 83 ANAKEALNFMPINGKPIRIMY--SHRDPSIR----KSGYGNVFIKNLDTSIDNKALCDTF 136
NA + +N M +N K + + + S +D + K+ + N++IKN+D I + F
Sbjct: 187 NNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNIYIKNIDLEITDDEFRVMF 246
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
AFG + S ++ D +G+S+G+GFV + N E+A+ A+ +N + +++YVG ++ E
Sbjct: 247 EAFGEITSATLSHDQDGKSRGFGFVNYANHESAEAAVAEMNEKEVKTQKLYVGRAQKKHE 306
Query: 197 R----------AQQNVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG 244
R A+ + K+ N+YV NL + + DE L+ +F +GTITSA VM+D+
Sbjct: 307 REEELRKQYEAARMEKASKYQGVNLYVKNLTDDIDDEKLRDLFTPYGTITSAKVMRDAAE 366
Query: 245 KS---------------------------------------------------RCFG--- 250
+S + FG
Sbjct: 367 RSPTPEAEDKETKGSEEKEVKTEETAEVKTEETTEEKKTEEQGEASEEKKAEKKAFGKSK 426
Query: 251 ---FVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
FV F SPD A+ AV ++N N K YV AQ++ R + L A + R
Sbjct: 427 GFGFVCFSSPDEASKAVTEMNQRMVNAKPLYVALAQRKDVRRSQLEASIQARNTIR 482
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 144/294 (48%), Gaps = 30/294 (10%)
Query: 347 GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQF-AQIRAP 405
G SKG GF FS P+EA++A+ EMN +M+ KPLYVA+AQRK+ R+++L+A A+
Sbjct: 423 GKSKGFGFVCFSSPDEASKAVTEMNQRMVNAKPLYVALAQRKDVRRSQLEASIQARNTIR 482
Query: 406 GGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPP-QAAGYGFQQQ---VFPGLRPGG 461
+ A+G+P P + P ++YG G G MPP Q G F Q P + G
Sbjct: 483 QQQAAAAAGMP-----QPFMQPA-VFYGAGQQGFMPPGQRGGMPFAPQGGMPMPNMPAGR 536
Query: 462 PNYIMPY-HLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVS 520
P Y P+ R + P Q+ G MQ P + N G+ Y G
Sbjct: 537 PQYPGPFPQGGRGMPPNQQLPPNFQGMPMGMQAPGGIPN---GMGYPMPQAFGRGGGGRG 593
Query: 521 MVPVPFEVSGMPATPVETP---------------RPVPVPISTLTSALASASPDDRTRML 565
+ +P + G P P +P ++ AL +A P + +ML
Sbjct: 594 VPGMPMNMRGGPGFSRGGPQMGRGGGRGQPAPGGQPAGGEPASANQALLAAPPAQQKQML 653
Query: 566 GEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
GE LYP ++ +P A K+TGMLLEMD E+L L++ EAL+ KV EA+ V E
Sbjct: 654 GEALYPKIQAQQPELAGKITGMLLEMDNAELLGLLDDEEALRGKVDEALNVYDE 707
>gi|444721742|gb|ELW62457.1| Polyadenylate-binding protein 4-like protein [Tupaia chinensis]
Length = 370
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/369 (50%), Positives = 253/369 (68%), Gaps = 4/369 (1%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
V + Y SLYVGDL +V E L+ FS V V+S+R+CRD R SLGYAYVN+
Sbjct: 3 VEAKYRMASLYVGDLSADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLA 62
Query: 81 DAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
DA A + +NF I GK IR+M+S RD +RKSG GNVFIKNLD SIDNK L + F+AFG
Sbjct: 63 DAQKALDTMNFDMIKGKSIRLMWSQRDACLRKSGIGNVFIKNLDRSIDNKTLYEHFSAFG 122
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
+LS KV D G SKGY FV F+N+ AA AI+ +NG L+ D +V+VG F R++R +
Sbjct: 123 KILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKDCKVFVGRFKNRKDREAE 181
Query: 201 --NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
N + +FTNVY+ N + + DE L+++F +G S VM D GKS+ FGFV+F + +
Sbjct: 182 LRNKASEFTNVYIKNFGDDMDDERLREVFSKYGKTLSVKVMTDPSGKSKGFGFVSFDNHE 241
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
AA AVE++NG N ++ +VGRAQK+ ER+A+L+ FEQ++ R K +G LY+KNLD
Sbjct: 242 AAQKAVEEMNGKDINGQLIFVGRAQKKVERQAELKQMFEQQKRERIRKCQGVKLYIKNLD 301
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
D+I+DEKL++ FS FG+I+ KVM + G SKG G FS PEEAT+A+ EMNG+++G K
Sbjct: 302 DTIDDEKLRKEFSSFGSISRVKVM-QEEGQSKGFGLICFSSPEEATKAMTEMNGQILGSK 360
Query: 379 PLYVAVAQR 387
PL +A++Q+
Sbjct: 361 PLNIALSQK 369
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 157/289 (54%), Gaps = 22/289 (7%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L F+ G VLS ++ D +S GY +V F AQ A+
Sbjct: 11 SLYVGDLSADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDT 70
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPK---FTNVYVNNLAETVTDEDLKKIFGHFGT 232
+N +I K + R +Q++ + NV++ NL ++ ++ L + F FG
Sbjct: 71 MNFDMIKGKSI-------RLMWSQRDACLRKSGIGNVFIKNLDRSIDNKTLYEHFSAFGK 123
Query: 233 ITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADL 292
I S+ VM D G S+ + FV+FQ+ AA A+E++NG D +VGR + R +REA+L
Sbjct: 124 ILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKDCKVFVGRFKNRKDREAEL 182
Query: 293 RAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGS 352
R K + N+Y+KN D ++DE+L+E+FS++G S KVM D G SKG
Sbjct: 183 RNKASE----------FTNVYIKNFGDDMDDERLREVFSKYGKTLSVKVMTDPSGKSKGF 232
Query: 353 GFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ 401
GF +F E A +A+ EMNGK I + ++V AQ+K ER+A L+ F Q
Sbjct: 233 GFVSFDNHEAAQKAVEEMNGKDINGQLIFVGRAQKKVERQAELKQMFEQ 281
>gi|440893983|gb|ELR46563.1| Polyadenylate-binding protein 4-like protein [Bos grunniens mutus]
Length = 370
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/369 (50%), Positives = 254/369 (68%), Gaps = 4/369 (1%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
+ + Y SLYVGDL +V E L+ FS V V+S+R+CRD R SLGYAYVN+
Sbjct: 3 IAAKYRQASLYVGDLHADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLQLA 62
Query: 81 DAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
DA A + +NF I GK IR+M+S RD +RKSG GNVFIKNLD SIDNK L + F+AFG
Sbjct: 63 DAQKALDTMNFDLIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLDRSIDNKTLYEHFSAFG 122
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ- 199
+LS KV D +G S+GY FV F+N+ AA AI+ +NG L+ D +++VG F R++R
Sbjct: 123 KILSSKVMSDDHG-SRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKSRKDREAE 181
Query: 200 -QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
QN + +FTNVY+ N + + DE L ++F +G S VM DS GKS+ FGFV+F S +
Sbjct: 182 FQNKAHEFTNVYIKNFGDEMDDERLNEVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHE 241
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
AA AVE++NG N ++ +VGRAQK+AER+A+L+ FEQ + R+ + +GA LY+KNLD
Sbjct: 242 AAKRAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQLKHERFRRCQGAKLYIKNLD 301
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
++I+DEKL+ FS FG+I+ KVM + G SKG G FS EEAT+A+ EMNG+++G K
Sbjct: 302 ETIDDEKLRREFSSFGSISRVKVM-QEEGRSKGFGLICFSSAEEATKAMTEMNGRILGSK 360
Query: 379 PLYVAVAQR 387
PL +A+AQ+
Sbjct: 361 PLNIALAQK 369
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 159/288 (55%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L F+A G VLS ++ D +S GY +V F AQ A+
Sbjct: 11 SLYVGDLHADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDT 70
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N LI K + + ++ +R ++ NV++ NL ++ ++ L + F FG I S
Sbjct: 71 MNFDLIKGKSIRL-MWSQRDAYLRK---SGIGNVFIKNLDRSIDNKTLYEHFSAFGKILS 126
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ VM D G SR + FV+FQ+ AA A+E++NG D +VGR + R +REA+ + K
Sbjct: 127 SKVMSDDHG-SRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKSRKDREAEFQNK 185
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ N+Y+KN D ++DE+L E+FS++G S KVM D G SKG GF
Sbjct: 186 AHE----------FTNVYIKNFGDEMDDERLNEVFSKYGKTLSVKVMTDSSGKSKGFGFV 235
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+F E A RA+ EMNGK I + L+V AQ+K ER+A L+ F Q++
Sbjct: 236 SFDSHEAAKRAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQLK 283
>gi|398404546|ref|XP_003853739.1| hypothetical protein MYCGRDRAFT_56466 [Zymoseptoria tritici IPO323]
gi|339473622|gb|EGP88715.1| hypothetical protein MYCGRDRAFT_56466 [Zymoseptoria tritici IPO323]
Length = 763
Score = 370 bits (951), Expect = e-99, Method: Compositional matrix adjust.
Identities = 210/477 (44%), Positives = 282/477 (59%), Gaps = 68/477 (14%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
LYVG+L+ +V E+ L++LFS + QV S+RVCRD R SLGYAYVNY+ D A E L
Sbjct: 55 LYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNVAGDGERALEEL 114
Query: 90 NFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAI 149
N+ I G+P RIM+S RDP +RK+G GNVFIKNLD +IDNKAL DTFAAFG +LSCKVA
Sbjct: 115 NYTLIKGRPCRIMWSQRDPLLRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQ 174
Query: 150 DSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSPKFT 207
D N SKGYGFV +E EAA AIK +NGML+N+K+V+VG + +++R + + FT
Sbjct: 175 DENANSKGYGFVHYETAEAANQAIKNVNGMLLNEKKVFVGHHIPKKDRMSKVEEMKANFT 234
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFGFVNFQSPDAAAAAVEK 266
N+YV N+ TD + +++F +G ITSA + D++ GK+R FGFVN+ + A AVE+
Sbjct: 235 NIYVKNIDSETTDNEFRELFEKYGDITSASLAHDNESGKNRGFGFVNYIRHEDAYKAVEE 294
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
LN + + YVGRAQK+ ERE +LR ++E R + K G NLY+KNL D I+D++L
Sbjct: 295 LNDSDFKGQKLYVGRAQKKHEREEELRKQYEAARQEKSAKYTGVNLYVKNLADEIDDDEL 354
Query: 327 KELFSEFGTITSCKVMVD------------------------------------------ 344
+++F +G ITS KVM D
Sbjct: 355 RKVFEPYGAITSAKVMRDTLPADGSETPAKKEGDAEEKEAEPEKDGEKKDDVDDLSKKLD 414
Query: 345 -------QHGFSKGSGFA--AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARL 395
+ K GF FS P+EAT+A+ E+N KM+ KPLYVA+AQRKE RK++L
Sbjct: 415 TVTIQGEKKLLGKSKGFGFVCFSNPDEATKAVTELNQKMVHGKPLYVALAQRKEVRKSQL 474
Query: 396 QAQFA---QIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYG-QGTPGLMPPQAAGYG 448
+A Q+R A GIP P+ Q++ G G P +MP A G G
Sbjct: 475 EASIQARNQVRMQ--QQATAGGIP------PQFMQPQMFMGPNGQPMMMP--AGGRG 521
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 166/347 (47%), Gaps = 77/347 (22%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D++ S GY +V+Y + A
Sbjct: 138 TGQGNV--FIKNLDAAIDNKALHDTFAAFGNILSCKVAQDENANSK-GYGFVHYETAEAA 194
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIR--------KSGYGNVFIKNLDTSIDNKALCD 134
A + +N M +N K ++ H P K+ + N+++KN+D+ + +
Sbjct: 195 NQAIKNVNGMLLNEK--KVFVGHHIPKKDRMSKVEEMKANFTNIYVKNIDSETTDNEFRE 252
Query: 135 TFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVR 193
F +G + S +A D+ +G+++G+GFV + E A A++ LN +++YVG +
Sbjct: 253 LFEKYGDITSASLAHDNESGKNRGFGFVNYIRHEDAYKAVEELNDSDFKGQKLYVGRAQK 312
Query: 194 RQER----------AQQNVSPKFT--NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD 241
+ ER A+Q S K+T N+YV NLA+ + D++L+K+F +G ITSA VM+D
Sbjct: 313 KHEREEELRKQYEAARQEKSAKYTGVNLYVKNLADEIDDDELRKVFEPYGAITSAKVMRD 372
Query: 242 S---DG------------------------------------------------KSRCFG 250
+ DG KS+ FG
Sbjct: 373 TLPADGSETPAKKEGDAEEKEAEPEKDGEKKDDVDDLSKKLDTVTIQGEKKLLGKSKGFG 432
Query: 251 FVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
FV F +PD A AV +LN + K YV AQ++ R++ L A +
Sbjct: 433 FVCFSNPDEATKAVTELNQKMVHGKPLYVALAQRKEVRKSQLEASIQ 479
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
+AL +AS + +MLGE LYP + +P A K+TGMLLEMD E+L+L + +AL+ KV
Sbjct: 661 AALNAASAPQQKQMLGEALYPKIHAQQPELAGKITGMLLEMDNEELLNLTGNDQALREKV 720
Query: 611 AEAMAVLQE 619
EA+ V E
Sbjct: 721 DEALTVYDE 729
>gi|255940906|ref|XP_002561222.1| Pc16g09030 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585845|emb|CAP93573.1| Pc16g09030 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 734
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 184/359 (51%), Positives = 240/359 (66%), Gaps = 21/359 (5%)
Query: 7 AAATAAVTSATTAAVPSGYG-------------------NVSLYVGDLEQNVNESQLYDL 47
A TA VT AA P G + SLYVG+L+ +V E+ LY+L
Sbjct: 5 APTTAPVTDNVVAAAPEANGAPVEATPEAAGDAANNQPHSASLYVGELDPSVTEAMLYEL 64
Query: 48 FSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRD 107
FS + QV S+RVCRD R SLGYAYVNY+N D A E LN+ I GKP RIM+S RD
Sbjct: 65 FSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRD 124
Query: 108 PSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEE 167
P++RK+G GNVFIKNLD +IDNKAL DTFAAFG +LSCKVA D SKGYGFV +E E
Sbjct: 125 PALRKTGQGNVFIKNLDNAIDNKALHDTFAAFGNILSCKVAQDEFANSKGYGFVHYETAE 184
Query: 168 AAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKK 225
AA NAIK +NGML+NDK+V+VG + +++R + + FTN+Y+ N+ +TD++ +
Sbjct: 185 AANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNIYIKNIDLEITDDEFRT 244
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
+F FG ITSA + D DGKSR FGFVN+ + ++A AAV ++N + YVGRAQK+
Sbjct: 245 MFEAFGEITSATLSHDQDGKSRGFGFVNYANHESAEAAVAEMNEKEVKSQKLYVGRAQKK 304
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
ERE +LR ++E R+ + K +G NLY+KNL D I+DEKL++LF+ +GTITS KVM D
Sbjct: 305 HEREEELRKQYEAARMEKASKYQGVNLYVKNLTDDIDDEKLRDLFTPYGTITSAKVMRD 363
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 154/290 (53%), Gaps = 19/290 (6%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ LD S+ L + F++ G V S +V D+ +S GY +V + N + A++
Sbjct: 46 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 105
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN LI K + ++ +R ++ NV++ NL + ++ L F FG I S
Sbjct: 106 LNYTLIKGKPCRI-MWSQRDPALRKTGQ---GNVFIKNLDNAIDNKALHDTFAAFGNILS 161
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V +D S+ +GFV++++ +AA A++ +NG NDK +VG + +R+
Sbjct: 162 CKVAQDEFANSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQ------ 215
Query: 296 FEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSG 353
S++E++K N+Y+KN+D I D++ + +F FG ITS + DQ G S+G G
Sbjct: 216 ------SKFEEMKANFTNIYIKNIDLEITDDEFRTMFEAFGEITSATLSHDQDGKSRGFG 269
Query: 354 FAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
F ++ E A A+ EMN K + + LYV AQ+K ER+ L+ Q+ R
Sbjct: 270 FVNYANHESAEAAVAEMNEKEVKSQKLYVGRAQKKHEREEELRKQYEAAR 319
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 166/357 (46%), Gaps = 79/357 (22%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D+ S GY +V+Y + A
Sbjct: 130 TGQGNV--FIKNLDNAIDNKALHDTFAAFGNILSCKVAQDEFANSK-GYGFVHYETAEAA 186
Query: 83 ANAKEALNFMPINGKPIRIMY--SHRDPSIR----KSGYGNVFIKNLDTSIDNKALCDTF 136
NA + +N M +N K + + + S +D + K+ + N++IKN+D I + F
Sbjct: 187 NNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNIYIKNIDLEITDDEFRTMF 246
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
AFG + S ++ D +G+S+G+GFV + N E+A+ A+ +N + +++YVG ++ E
Sbjct: 247 EAFGEITSATLSHDQDGKSRGFGFVNYANHESAEAAVAEMNEKEVKSQKLYVGRAQKKHE 306
Query: 197 R----------AQQNVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG 244
R A+ + K+ N+YV NL + + DE L+ +F +GTITSA VM+D+
Sbjct: 307 REEELRKQYEAARMEKASKYQGVNLYVKNLTDDIDDEKLRDLFTPYGTITSAKVMRDAAE 366
Query: 245 KS----------------------------------------------------RCFG-- 250
+S + FG
Sbjct: 367 RSPTPEAEEKEAAKETKDSEEKEVKTEETAEVKTEAAEKKTEEGEATEEKKTEKKAFGKS 426
Query: 251 ----FVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
FV F SPD A+ AV ++N N K YV AQ++ R + L A + R
Sbjct: 427 KGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEASIQARNTIR 483
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 144/308 (46%), Gaps = 61/308 (19%)
Query: 347 GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQF-AQIRAP 405
G SKG GF FS P+EA++A+ EMN +M+ KPLYVA+AQRK+ R+++L+A A+
Sbjct: 424 GKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEASIQARNTIR 483
Query: 406 GGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPP-QAAGYGFQQQ---VFPGLRPGG 461
+ A+G+P P + P ++YG G G MPP Q G F Q P + G
Sbjct: 484 QQQAAAAAGMP-----QPFMQPA-VFYGAGQQGFMPPGQRGGMPFAPQGGMPMPNMPGGR 537
Query: 462 PNYIMPY-HLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVS 520
P Y P+ R + P Q+ G MQ P + N G+ Y
Sbjct: 538 PQYPGPFPQGGRGMPPNQQLPPNFQGMPMGMQAPGGIPN---GMGY-------------- 580
Query: 521 MVPVP---------FEVSGMP--------------------ATPVETPRPVPVPISTLTS 551
P+P V GMP P +P P S
Sbjct: 581 --PMPQAFGRGGGGRGVPGMPMNMRGGPGFGRGGPQMGRGRGQPAPGGQPAGEPASA-NQ 637
Query: 552 ALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVA 611
AL +A P + +MLGE LYP ++ +P A K+TGMLLEMD E+L L++ EAL+ KV
Sbjct: 638 ALLAAPPAQQKQMLGEALYPKIQAQQPELAGKITGMLLEMDNAELLGLLDDEEALRGKVD 697
Query: 612 EAMAVLQE 619
EA+ V E
Sbjct: 698 EALNVYDE 705
>gi|389629168|ref|XP_003712237.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|158514092|sp|A4QUF0.1|PABP_MAGO7 RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|351644569|gb|EHA52430.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|440469069|gb|ELQ38192.1| polyadenylate-binding protein [Magnaporthe oryzae Y34]
gi|440487573|gb|ELQ67355.1| polyadenylate-binding protein [Magnaporthe oryzae P131]
Length = 762
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 182/344 (52%), Positives = 242/344 (70%), Gaps = 5/344 (1%)
Query: 4 TGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQ 63
TG TA T ++ A P + SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD
Sbjct: 39 TGEEIDTAGPTPSSAAPHPQA--SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDA 96
Query: 64 SKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
R SLGYAYVNY+ D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNL
Sbjct: 97 VTRRSLGYAYVNYNTTADGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNL 156
Query: 124 DTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND 183
D +IDNKAL DTFAAFG +LSCKVA D NG SKGYGFV +E +EAA AIK +NGML+N+
Sbjct: 157 DVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNE 216
Query: 184 KQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD 241
K+VYVG + +++R + + FTN+YV N+ VTD++ + +F +G +TS+ + +D
Sbjct: 217 KKVYVGHHIPKKDRQSKFDEMKANFTNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARD 276
Query: 242 SD-GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQER 300
+ GKSR FGFVNF S + A+ AV++LN + + YVGRAQK+ ERE +LR +E R
Sbjct: 277 QETGKSRGFGFVNFTSHEDASKAVQELNEKEFHGQNLYVGRAQKKHEREEELRKSYEAAR 336
Query: 301 ISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
+ K +G NLY+KNLDD ++DEKL++LFSEFG ITS KVM D
Sbjct: 337 QEKASKYQGVNLYIKNLDDEVDDEKLRQLFSEFGPITSAKVMRD 380
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 158/291 (54%), Gaps = 20/291 (6%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ LD S+ L + F+ G+V S +V D+ +S GY +V + + A++
Sbjct: 62 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEE 121
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN LI + + ++ +R ++ NV++ NL + ++ L F FG I S
Sbjct: 122 LNYTLIKGRPCRI-MWSQRDPALRKTGQ---GNVFIKNLDVAIDNKALHDTFAAFGNILS 177
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V +D +G S+ +GFV++++ +AA+ A++ +NG N+K YVG + +R+
Sbjct: 178 CKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQ------ 231
Query: 296 FEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH-GFSKGS 352
S+++++K N+Y+KN++ + D++ + LF ++G +TS + DQ G S+G
Sbjct: 232 ------SKFDEMKANFTNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGF 285
Query: 353 GFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
GF F+ E+A++A+ E+N K + LYV AQ+K ER+ L+ + R
Sbjct: 286 GFVNFTSHEDASKAVQELNEKEFHGQNLYVGRAQKKHEREEELRKSYEAAR 336
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 157/338 (46%), Gaps = 73/338 (21%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D++ S GY +V+Y + A
Sbjct: 146 TGQGNV--FIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSK-GYGFVHYETDEAA 202
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIR--------KSGYGNVFIKNLDTSIDNKALCD 134
+ A + +N M +N K ++ H P K+ + N+++KN++ + +
Sbjct: 203 SQAIKHVNGMLLNEK--KVYVGHHIPKKDRQSKFDEMKANFTNIYVKNINPEVTDDEFRT 260
Query: 135 TFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVR 193
F +G V S +A D G+S+G+GFV F + E A A++ LN + + +YVG +
Sbjct: 261 LFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQELNEKEFHGQNLYVGRAQK 320
Query: 194 RQER----------AQQNVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD 241
+ ER A+Q + K+ N+Y+ NL + V DE L+++F FG ITSA VM+D
Sbjct: 321 KHEREEELRKSYEAARQEKASKYQGVNLYIKNLDDEVDDEKLRQLFSEFGPITSAKVMRD 380
Query: 242 S------------------------------DGKSR-----------------CFGFVNF 254
S D K FGFV F
Sbjct: 381 SITEPGEEGESKEGEESEKNKENKPEEKEGDDSKPEEKEGEDSKSKSKLGKSKGFGFVCF 440
Query: 255 QSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADL 292
+PD A AV ++N N+K YV AQ++ R+ L
Sbjct: 441 ANPDDATKAVAEMNQRMVNNKPLYVALAQRKDVRKNQL 478
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 139/318 (43%), Gaps = 66/318 (20%)
Query: 353 GFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERK--------ARLQAQFAQIRA 404
GF F+ P++AT+A+ EMN +M+ KPLYVA+AQRK+ RK AR Q + Q A
Sbjct: 436 GFVCFANPDDATKAVAEMNQRMVNNKPLYVALAQRKDVRKNQLEQSIQARNQLRMQQAAA 495
Query: 405 PGGM------SPLASGIPGYHHG-APRLGPQQLYYGQG-------TPGLMPPQAAGYGFQ 450
GM +P+ G PG G P G + + Y QG PG P AG+ Q
Sbjct: 496 AAGMPQQYMQAPVFYG-PGSQPGFMPPAGGRGMPYPQGGMPMQPGRPGQFP---AGFAAQ 551
Query: 451 QQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQF---MRNSNQGIRYL 507
Q G R P I P + G G Q PQF M+ Q
Sbjct: 552 Q----GGRGAMPQGIPPMY-------GLPGQFPPQGPFPQPNNPQFLAAMQQIQQSALAG 600
Query: 508 DNARNGTDQSVVSMVPVPFEV--SGMPATPVETPRPVPVPIST----------------- 548
+ VPVP +G+P P + P
Sbjct: 601 GRGGPAGRGPMQGGVPVPGMPGGAGLPGFPPNARQQGPGAGRGAAAGRAPAGAPAGARGA 660
Query: 549 -----LTSALASAS--PDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIE 601
L LA+ + P + ++LGE ++P ++ I P A K+TGMLLEMD TE++ L+E
Sbjct: 661 GAPEGLQGQLAAVADNPGQQKQILGEAIFPKIQAIHPELAGKITGMLLEMDNTELVALVE 720
Query: 602 SPEALKTKVAEAMAVLQE 619
+ AL++KV EA+AV +
Sbjct: 721 NDGALRSKVDEALAVYDD 738
>gi|307095208|gb|ADN29910.1| poly A binding protein cytoplasmic 1 isoform 1-like protein
[Triatoma matogrossensis]
Length = 341
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 187/338 (55%), Positives = 242/338 (71%), Gaps = 6/338 (1%)
Query: 22 PSG--YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
P G Y SLYVGDL +V ++ L++ FS V+S+RVC+D R SLGYAYVN+ P
Sbjct: 5 PGGPNYPMASLYVGDLHSDVTKAMLFEKFSSAGPVLSIRVCKDMITRRSLGYAYVNFQQP 64
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF + G+PIRIM+S RDPS+RKSG GNVFIKNLD +IDNKA+ DTF+AF
Sbjct: 65 ADAERALDTMNFDTLKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAF 124
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKVA D +G SKGYGFV FE EEAA +I +NGML+N K+V+VG F+ R+ER +
Sbjct: 125 GNILSCKVAQDESGSSKGYGFVHFETEEAATKSIDKVNGMLLNGKKVFVGKFIPRKEREK 184
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + FTNVYV N E TD+ LK++F +G ITS V+ + D KSR FGFV F+ P
Sbjct: 185 ELGEKAKLFTNVYVKNFGEDFTDDMLKEMFEKYGPITSHTVVVNKDQKSRGFGFVAFEDP 244
Query: 258 DAAAAAVEKLNGT-TNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
+AA AVE LNG K YVGRAQK+AER+ +L+ KFEQ ++ R + +G NLY+KN
Sbjct: 245 EAAERAVEDLNGKEIIEGKQLYVGRAQKKAERQQELKRKFEQLKMERMNRYQGVNLYVKN 304
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGF 354
LDD+I+DE+L++ FS FGTITS KVM+++ SKG GF
Sbjct: 305 LDDTIDDERLRKEFSPFGTITSAKVMLEERR-SKGFGF 341
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 159/289 (55%), Gaps = 16/289 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L + F++ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 14 SLYVGDLHSDVTKAMLFEKFSSAGPVLSIRVCKDMITRRSLGYAYVNFQQPADAERALDT 73
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N + + + + R + V NV++ NL + + ++ + F FG I S
Sbjct: 74 MNFDTLKGRPIRIMWSQRDPSLRKSGVG----NVFIKNLDKNIDNKAMYDTFSAFGNILS 129
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V +D G S+ +GFV+F++ +AA +++K+NG N K +VG+ R ERE +L K
Sbjct: 130 CKVAQDESGSSKGYGFVHFETEEAATKSIDKVNGMLLNGKKVFVGKFIPRKEREKELGEK 189
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
KL N+Y+KN + D+ LKE+F ++G ITS V+V++ S+G GF
Sbjct: 190 ---------AKL-FTNVYVKNFGEDFTDDMLKEMFEKYGPITSHTVVVNKDQKSRGFGFV 239
Query: 356 AFSMPEEATRALNEMNGK-MIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
AF PE A RA+ ++NGK +I K LYV AQ+K ER+ L+ +F Q++
Sbjct: 240 AFEDPEAAERAVEDLNGKEIIEGKQLYVGRAQKKAERQQELKRKFEQLK 288
>gi|119625554|gb|EAX05149.1| hCG1647909 [Homo sapiens]
Length = 369
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/369 (50%), Positives = 249/369 (67%), Gaps = 4/369 (1%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
V + Y SLYVGDL +V E L+ FS V V+S+R+CRDQ R SLGYAYVN+
Sbjct: 3 VAAKYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLA 62
Query: 81 DAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
DA A + +NF I GK IR+M+S RD +R+SG GNVFIKNLD SIDNK L + F+AFG
Sbjct: 63 DAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFG 122
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
+LS KV D G SKGY FV F+N+ AA AI+ +NG L+ +V+VG F R++R +
Sbjct: 123 KILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAE 181
Query: 201 --NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
+ + +FTNVY+ N + DE LK +F +G S VM DS GKS+ FGFV+F S +
Sbjct: 182 LRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHE 241
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
AA AVE++NG N ++ +VGRAQK+ ER+A+L+ FEQ + R +G LY+KNLD
Sbjct: 242 AAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLD 301
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
D+I+DEKL+ FS FG+I+ KVM + G SKG G FS PE+AT+A+ EMNG+++G K
Sbjct: 302 DTIDDEKLRNEFSSFGSISRVKVM-QEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSK 360
Query: 379 PLYVAVAQR 387
PL +A+AQR
Sbjct: 361 PLSIALAQR 369
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 160/288 (55%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L F+ G VLS ++ D +S GY +V F AQ A+
Sbjct: 11 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 70
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + ++ +R ++ NV++ NL +++ ++ L + F FG I S
Sbjct: 71 MNFDIIKGKSIRL-MWSQRDAYLRR---SGIGNVFIKNLDKSIDNKTLYEHFSAFGKILS 126
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ VM D G S+ + FV+FQ+ AA A+E++NG +VGR + R +REA+LR+K
Sbjct: 127 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSK 185
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ N+Y+KN ++DE+LK++FS++G S KVM D G SKG GF
Sbjct: 186 ASE----------FTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFV 235
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+F E A +A+ EMNG+ I + ++V AQ+K ER+A L+ F Q++
Sbjct: 236 SFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLK 283
>gi|440638008|gb|ELR07927.1| hypothetical protein GMDG_02786 [Geomyces destructans 20631-21]
Length = 805
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 181/346 (52%), Positives = 242/346 (69%), Gaps = 5/346 (1%)
Query: 2 EATGAAAATAAVT-SATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVC 60
EAT TA T + AA P + SLYVG+L+ +V E+ L++LFSQ+ V S+RVC
Sbjct: 37 EATSEDPDTAGPTPTGAQAAHPQA--SASLYVGELDPSVTEAMLFELFSQIGSVASIRVC 94
Query: 61 RDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFI 120
RD R SLGYAYVNY+ D A E LN+ I G+P RIM+S RDP++RK+G GNVFI
Sbjct: 95 RDAVTRRSLGYAYVNYNTTIDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFI 154
Query: 121 KNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGML 180
KNLD +IDNKAL DTFAAFG +LSCKVA D +G SKGYGFV +E +EAA AIK +NGML
Sbjct: 155 KNLDVAIDNKALHDTFAAFGNILSCKVAQDESGNSKGYGFVHYETDEAASQAIKHVNGML 214
Query: 181 INDKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
+N+K+V+VG + +++R + + FTN+YV N+ TD+ +++F FG +TSA +
Sbjct: 215 LNEKKVFVGHHIPKKDRQSKFEEMKANFTNIYVKNIPADATDDQFRELFEKFGDVTSASL 274
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+D GK+R FGFVNF + + A+AAV++LNG + YVGRAQK+ ERE +LR +E
Sbjct: 275 ARDEAGKNRGFGFVNFINHEHASAAVDELNGKDFMGQDLYVGRAQKKHEREEELRKSYEA 334
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
RI + K +G NLY+KNL+D ++DEKL+ELF+ +G ITS KVM D
Sbjct: 335 ARIEKASKYQGVNLYVKNLEDDVDDEKLRELFAPYGAITSAKVMRD 380
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 155/290 (53%), Gaps = 19/290 (6%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ LD S+ L + F+ G+V S +V D+ +S GY +V + + A++
Sbjct: 63 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTIDGEKALEE 122
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN LI + + ++ +R ++ NV++ NL + ++ L F FG I S
Sbjct: 123 LNYTLIKGRPCRI-MWSQRDPALRKTGQ---GNVFIKNLDVAIDNKALHDTFAAFGNILS 178
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V +D G S+ +GFV++++ +AA+ A++ +NG N+K +VG + +R+
Sbjct: 179 CKVAQDESGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVFVGHHIPKKDRQ------ 232
Query: 296 FEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSG 353
S++E++K N+Y+KN+ D++ +ELF +FG +TS + D+ G ++G G
Sbjct: 233 ------SKFEEMKANFTNIYVKNIPADATDDQFRELFEKFGDVTSASLARDEAGKNRGFG 286
Query: 354 FAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
F F E A+ A++E+NGK + LYV AQ+K ER+ L+ + R
Sbjct: 287 FVNFINHEHASAAVDELNGKDFMGQDLYVGRAQKKHEREEELRKSYEAAR 336
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 126/240 (52%), Gaps = 25/240 (10%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D+S S GY +V+Y + A
Sbjct: 147 TGQGNV--FIKNLDVAIDNKALHDTFAAFGNILSCKVAQDESGNSK-GYGFVHYETDEAA 203
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIR--------KSGYGNVFIKNLDTSIDNKALCD 134
+ A + +N M +N K ++ H P K+ + N+++KN+ + +
Sbjct: 204 SQAIKHVNGMLLNEK--KVFVGHHIPKKDRQSKFEEMKANFTNIYVKNIPADATDDQFRE 261
Query: 135 TFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRR 194
F FG V S +A D G+++G+GFV F N E A A+ LNG + +YVG ++
Sbjct: 262 LFEKFGDVTSASLARDEAGKNRGFGFVNFINHEHASAAVDELNGKDFMGQDLYVGRAQKK 321
Query: 195 QERAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
ER ++ + K+ N+YV NL + V DE L+++F +G ITSA VM+D+
Sbjct: 322 HEREEELRKSYEAARIEKASKYQGVNLYVKNLEDDVDDEKLRELFAPYGAITSAKVMRDT 381
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 152/357 (42%), Gaps = 110/357 (30%)
Query: 347 GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFA---QIR 403
G SKG GF F+ P+EAT+A+ EMN +M+ KPLYVA+AQRK+ RK++L+A QIR
Sbjct: 447 GKSKGFGFVCFNNPDEATKAVTEMNQRMVNGKPLYVALAQRKDVRKSQLEASIQARNQIR 506
Query: 404 APGGMSPLASGIPGYHHGAPRLGPQQLYYGQGT-PGLMPPQAAGYGFQQQVFP------- 455
+ A+G+P AP ++YG G PG MPP A G G FP
Sbjct: 507 MQ--QAAAAAGLPQQFIQAP------MFYGPGQQPGFMPPNAGGRGMP---FPLQQGMGI 555
Query: 456 ---GLRPG---------------GPNYIMP--YHLQRQVHPGQRTGVRRSGNTHQMQQPQ 495
G RPG GP + P Y L Q PG G ++GN PQ
Sbjct: 556 PAQGARPGQYPNFPPQQAGRGGPGPQQLPPSVYGLPGQFSPGAPYG--QAGN------PQ 607
Query: 496 FMRNSN--------------------------------------------QGIRYLDNAR 511
F+ Q R +NA
Sbjct: 608 FLAAMQQAQAAALAGAGRGGPGGRMPMQALPGMPPNMAGLQGVPGPGMPPQAYRQQNNAG 667
Query: 512 NGTDQSVVSMVPVPFEVSGMP---ATPVETPRPVPVP------ISTLTSALASASPDDRT 562
G M P + G P A PVP S L + L +A P +
Sbjct: 668 RG-------MPGRPGQAGGFPPQGARSTSQAGQAPVPGASQEGASALQAQLTTAPPAQQK 720
Query: 563 RMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
++LGE L+P ++ ++P A K+TGMLLEMD E++ LIE +L+ KV EA+ V E
Sbjct: 721 QLLGEALFPKIQVMQPELAGKITGMLLEMDNAELVGLIEDESSLRAKVDEALTVYDE 777
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
GKS+ FGFV F +PD A AV ++N N K YV AQ++ R++ L A + R
Sbjct: 447 GKSKGFGFVCFNNPDEATKAVTEMNQRMVNGKPLYVALAQRKDVRKSQLEASIQARNQIR 506
Query: 304 YEKLKGA 310
++ A
Sbjct: 507 MQQAAAA 513
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 153 GQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
G+SKG+GFV F N + A A+ +N ++N K +YV L R+ R Q
Sbjct: 447 GKSKGFGFVCFNNPDEATKAVTEMNQRMVNGKPLYVALAQRKDVRKSQ 494
>gi|259515737|sp|P0CB38.1|PAB4L_HUMAN RecName: Full=Polyadenylate-binding protein 4-like;
Short=PABP-4-like; Short=Poly(A)-binding protein 4-like
Length = 370
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 187/369 (50%), Positives = 249/369 (67%), Gaps = 4/369 (1%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
V + Y SLYVGDL +V E L+ FS V V+S+R+CRDQ R SLGYAYVN+
Sbjct: 3 VAAKYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLA 62
Query: 81 DAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
DA A + +NF I GK IR+M+S RD +R+SG GNVFIKNLD SIDNK L + F+AFG
Sbjct: 63 DAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFG 122
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
+LS KV D G SKGY FV F+N+ AA AI+ +NG L+ +V+VG F R++R +
Sbjct: 123 KILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAE 181
Query: 201 --NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
+ + +FTNVY+ N + DE LK +F +G S VM DS GKS+ FGFV+F S +
Sbjct: 182 LRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHE 241
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
AA AVE++NG N ++ +VGRAQK+ ER+A+L+ FEQ + R +G LY+KNLD
Sbjct: 242 AAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLD 301
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
D+I+DEKL+ FS FG+I+ KVM + G SKG G FS PE+AT+A+ EMNG+++G K
Sbjct: 302 DTIDDEKLRNEFSSFGSISRVKVM-QEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSK 360
Query: 379 PLYVAVAQR 387
PL +A+AQR
Sbjct: 361 PLSIALAQR 369
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 160/288 (55%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L F+ G VLS ++ D +S GY +V F AQ A+
Sbjct: 11 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 70
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + ++ +R ++ NV++ NL +++ ++ L + F FG I S
Sbjct: 71 MNFDIIKGKSIRL-MWSQRDAYLRR---SGIGNVFIKNLDKSIDNKTLYEHFSAFGKILS 126
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ VM D G S+ + FV+FQ+ AA A+E++NG +VGR + R +REA+LR+K
Sbjct: 127 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSK 185
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ N+Y+KN ++DE+LK++FS++G S KVM D G SKG GF
Sbjct: 186 ASE----------FTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFV 235
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+F E A +A+ EMNG+ I + ++V AQ+K ER+A L+ F Q++
Sbjct: 236 SFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLK 283
>gi|431899704|gb|ELK07658.1| Polyadenylate-binding protein 4-like protein [Pteropus alecto]
Length = 370
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 188/369 (50%), Positives = 252/369 (68%), Gaps = 4/369 (1%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
V + Y SLYVGDL V E L+ FS V V+S+R+CRD + SLGYAYVN+ +
Sbjct: 3 VEAKYRQASLYVGDLHAEVTEDLLFKKFSAVGPVLSIRICRDLVTQRSLGYAYVNFLHLA 62
Query: 81 DAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
DA A + +NF I GK IR+M+S RD +RKSG GNVFIKNL SIDNK L + F+AFG
Sbjct: 63 DAQKALDTMNFDMIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLHKSIDNKTLYEHFSAFG 122
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ- 199
+LS KV D G S+GY FV F+++ AA AI+ +NG L+ +++VG F R++R
Sbjct: 123 KILSSKVMSDDAG-SRGYAFVHFQSQTAADRAIEAMNGALLKGCRLFVGPFKNRKDRQAE 181
Query: 200 -QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
QN + +FTNVY+ N + + DE LK+IF HFG I S VM DS G+S+ FGFV+F S +
Sbjct: 182 LQNKANEFTNVYIKNFGDDMDDERLKEIFSHFGKILSVKVMTDSRGRSKGFGFVSFDSHE 241
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
AA AVE +NG + + +VGRAQK+AER+A+L+ FEQ + RY + +G LY+KNLD
Sbjct: 242 AAQRAVEIMNGKDLSGQPLFVGRAQKKAERQAELKLMFEQMKQERYRRFRGVKLYIKNLD 301
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
DSI+DE+L+ FS FG+I+ KVM ++ G SKG G FS PEEAT+A+ EMNG+++G K
Sbjct: 302 DSIDDERLRREFSSFGSISRVKVMKEE-GRSKGFGLICFSSPEEATKAMVEMNGRILGSK 360
Query: 379 PLYVAVAQR 387
L +A+AQR
Sbjct: 361 SLNIALAQR 369
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 161/288 (55%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQ-SKGYGFVQFENEEAAQNAIKM 175
++++ +L + L F+A G VLS ++ D Q S GY +V F + AQ A+
Sbjct: 11 SLYVGDLHAEVTEDLLFKKFSAVGPVLSIRICRDLVTQRSLGYAYVNFLHLADAQKALDT 70
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + ++ +R +++ NV++ NL +++ ++ L + F FG I S
Sbjct: 71 MNFDMIKGKSIRL-MWSQRDAYLRKS---GIGNVFIKNLHKSIDNKTLYEHFSAFGKILS 126
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ VM D D SR + FV+FQS AA A+E +NG +VG + R +R+A+L+ K
Sbjct: 127 SKVMSD-DAGSRGYAFVHFQSQTAADRAIEAMNGALLKGCRLFVGPFKNRKDRQAELQNK 185
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ N+Y+KN D ++DE+LKE+FS FG I S KVM D G SKG GF
Sbjct: 186 ANE----------FTNVYIKNFGDDMDDERLKEIFSHFGKILSVKVMTDSRGRSKGFGFV 235
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+F E A RA+ MNGK + +PL+V AQ+K ER+A L+ F Q++
Sbjct: 236 SFDSHEAAQRAVEIMNGKDLSGQPLFVGRAQKKAERQAELKLMFEQMK 283
>gi|397485813|ref|XP_003814033.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Pan paniscus]
Length = 427
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 186/369 (50%), Positives = 249/369 (67%), Gaps = 4/369 (1%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
V + Y SLYVGDL +V E L+ FS V V+S+R+CRDQ R SLGYAYVN+
Sbjct: 60 VAAKYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLA 119
Query: 81 DAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
DA A + +NF I GK IR+M+S RD +R+SG GNVFIKNLD SIDNK L + F+AFG
Sbjct: 120 DAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFG 179
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
+LS KV D G SKGY FV F+N+ AA AI+ +NG L+ +V+VG F R++R +
Sbjct: 180 KILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAE 238
Query: 201 --NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
+ + +FTN+Y+ N + DE LK +F +G S VM DS GKS+ FGFV+F S +
Sbjct: 239 LRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHE 298
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
AA AVE++NG N ++ +VGRAQK+ ER+A+L+ FEQ + R +G LY+KNLD
Sbjct: 299 AAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLD 358
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
D+I+DEKL+ FS FG+I+ KVM + G SKG G FS PE+AT+A+ EMNG+++G K
Sbjct: 359 DTIDDEKLRNEFSSFGSISRVKVM-QEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSK 417
Query: 379 PLYVAVAQR 387
PL +A+AQR
Sbjct: 418 PLSIALAQR 426
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 161/288 (55%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L F+ G VLS ++ D +S GY +V F AQ A+
Sbjct: 68 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 127
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + ++ +R +++ NV++ NL +++ ++ L + F FG I S
Sbjct: 128 MNFDIIKGKSIRL-MWSQRDAYLRRS---GIGNVFIKNLDKSIDNKTLYEHFSAFGKILS 183
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ VM D G S+ + FV+FQ+ AA A+E++NG +VGR + R +REA+LR+K
Sbjct: 184 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSK 242
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ N+Y+KN ++DE+LK++FS++G S KVM D G SKG GF
Sbjct: 243 ASE----------FTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFV 292
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+F E A +A+ EMNG+ I + ++V AQ+K ER+A L+ F Q++
Sbjct: 293 SFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLK 340
>gi|291084655|ref|NP_001108206.2| polyadenylate-binding protein 4-like [Homo sapiens]
Length = 428
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 187/369 (50%), Positives = 249/369 (67%), Gaps = 4/369 (1%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
V + Y SLYVGDL +V E L+ FS V V+S+R+CRDQ R SLGYAYVN+
Sbjct: 61 VAAKYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLA 120
Query: 81 DAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
DA A + +NF I GK IR+M+S RD +R+SG GNVFIKNLD SIDNK L + F+AFG
Sbjct: 121 DAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFG 180
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
+LS KV D G SKGY FV F+N+ AA AI+ +NG L+ +V+VG F R++R +
Sbjct: 181 KILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAE 239
Query: 201 --NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
+ + +FTNVY+ N + DE LK +F +G S VM DS GKS+ FGFV+F S +
Sbjct: 240 LRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHE 299
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
AA AVE++NG N ++ +VGRAQK+ ER+A+L+ FEQ + R +G LY+KNLD
Sbjct: 300 AAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLD 359
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
D+I+DEKL+ FS FG+I+ KVM + G SKG G FS PE+AT+A+ EMNG+++G K
Sbjct: 360 DTIDDEKLRNEFSSFGSISRVKVM-QEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSK 418
Query: 379 PLYVAVAQR 387
PL +A+AQR
Sbjct: 419 PLSIALAQR 427
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 161/288 (55%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L F+ G VLS ++ D +S GY +V F AQ A+
Sbjct: 69 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 128
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + ++ +R +++ NV++ NL +++ ++ L + F FG I S
Sbjct: 129 MNFDIIKGKSIRL-MWSQRDAYLRRS---GIGNVFIKNLDKSIDNKTLYEHFSAFGKILS 184
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ VM D G S+ + FV+FQ+ AA A+E++NG +VGR + R +REA+LR+K
Sbjct: 185 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSK 243
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ N+Y+KN ++DE+LK++FS++G S KVM D G SKG GF
Sbjct: 244 ASE----------FTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFV 293
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+F E A +A+ EMNG+ I + ++V AQ+K ER+A L+ F Q++
Sbjct: 294 SFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLK 341
>gi|426345476|ref|XP_004040437.1| PREDICTED: polyadenylate-binding protein 4-like [Gorilla gorilla
gorilla]
Length = 428
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 186/369 (50%), Positives = 249/369 (67%), Gaps = 4/369 (1%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
V + Y SLYVGDL +V E L+ FS V V+S+R+CRDQ R SLGYAYVN+
Sbjct: 61 VAAKYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLA 120
Query: 81 DAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
DA A + +NF I GK IR+M+S RD +R+SG GNVFIKNLD SIDNK L + F+AFG
Sbjct: 121 DAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFG 180
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
+LS KV D G SKGY FV F+N+ AA AI+ +NG L+ +V+VG F R++R +
Sbjct: 181 KILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAE 239
Query: 201 --NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
+ + +FTN+Y+ N + DE LK +F +G S VM DS GKS+ FGFV+F S +
Sbjct: 240 LRSKASEFTNIYIKNFGGEMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHE 299
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
AA AVE++NG N ++ +VGRAQK+ ER+A+L+ FEQ + R +G LY+KNLD
Sbjct: 300 AAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLD 359
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
D+I+DEKL+ FS FG+I+ KVM + G SKG G FS PE+AT+A+ EMNG+++G K
Sbjct: 360 DTIDDEKLRNEFSSFGSISRVKVM-QEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSK 418
Query: 379 PLYVAVAQR 387
PL +A+AQR
Sbjct: 419 PLSIALAQR 427
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 161/288 (55%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L F+ G VLS ++ D +S GY +V F AQ A+
Sbjct: 69 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 128
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + ++ +R +++ NV++ NL +++ ++ L + F FG I S
Sbjct: 129 MNFDIIKGKSIRL-MWSQRDAYLRRS---GIGNVFIKNLDKSIDNKTLYEHFSAFGKILS 184
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ VM D G S+ + FV+FQ+ AA A+E++NG +VGR + R +REA+LR+K
Sbjct: 185 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSK 243
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ N+Y+KN ++DE+LK++FS++G S KVM D G SKG GF
Sbjct: 244 ASE----------FTNIYIKNFGGEMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFV 293
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+F E A +A+ EMNG+ I + ++V AQ+K ER+A L+ F Q++
Sbjct: 294 SFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLK 341
>gi|332231054|ref|XP_003264711.1| PREDICTED: polyadenylate-binding protein 4-like [Nomascus
leucogenys]
Length = 428
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 186/369 (50%), Positives = 249/369 (67%), Gaps = 4/369 (1%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
V + Y SLYVGDL +V E L+ FS V V+S+R+CRDQ R SLGYAYVN+
Sbjct: 61 VAAKYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLA 120
Query: 81 DAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
DA A + +NF I GK IR+M+S RD +R+SG GNVFIKNLD SIDNK L + F+AFG
Sbjct: 121 DAQKALDTMNFDMIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFG 180
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
+LS KV D G SKGY FV F+N+ AA AI+ +NG L+ +V+VG F R++R +
Sbjct: 181 KILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAE 239
Query: 201 --NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
+ + +FTN+Y+ N + DE LK +F +G S VM DS GKS+ FGFV+F S +
Sbjct: 240 LRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHE 299
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
AA AVE++NG N ++ +VGRAQK+ ER+A+L+ FEQ + R +G LY+KNLD
Sbjct: 300 AAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLD 359
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
D+I+DEKL+ FS FG+I+ KVM + G SKG G FS PE+AT+A+ EMNG+++G K
Sbjct: 360 DTIDDEKLRNEFSSFGSISRVKVM-QEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSK 418
Query: 379 PLYVAVAQR 387
PL +A+AQR
Sbjct: 419 PLSIALAQR 427
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 171/326 (52%), Gaps = 33/326 (10%)
Query: 96 GKPIRIMYSHRDPSIRKSG-----------------YGNVFIKNLDTSIDNKALCDTFAA 138
G+ +++ HRD S G ++++ +L + L F+
Sbjct: 31 GQSCGLVFPHRDCSKSSRGQTHSGKDKEMNVAAKYRMASLYVGDLHADVTEDLLFRKFST 90
Query: 139 FGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
G VLS ++ D +S GY +V F AQ A+ +N +I K + + ++ +R
Sbjct: 91 VGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTMNFDMIKGKSIRL-MWSQRDAY 149
Query: 198 AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+++ NV++ NL +++ ++ L + F FG I S+ VM D G S+ + FV+FQ+
Sbjct: 150 LRRS---GIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG-SKGYAFVHFQNQ 205
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
AA A+E++NG +VGR + R +REA+LR+K + N+Y+KN
Sbjct: 206 SAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKASE----------FTNIYIKNF 255
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
++DE+LK++FS++G S KVM D G SKG GF +F E A +A+ EMNG+ I
Sbjct: 256 GGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDING 315
Query: 378 KPLYVAVAQRKEERKARLQAQFAQIR 403
+ ++V AQ+K ER+A L+ F Q++
Sbjct: 316 QLIFVGRAQKKVERQAELKQMFEQLK 341
>gi|332820240|ref|XP_526690.3| PREDICTED: polyadenylate-binding protein 4-like [Pan troglodytes]
Length = 428
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 186/369 (50%), Positives = 249/369 (67%), Gaps = 4/369 (1%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
V + Y SLYVGDL +V E L+ FS V V+S+R+CRDQ R SLGYAYVN+
Sbjct: 61 VAAKYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLA 120
Query: 81 DAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
DA A + +NF I GK IR+M+S RD +R+SG GNVFIKNLD SIDNK L + F+AFG
Sbjct: 121 DAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFG 180
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
+LS KV D G SKGY FV F+N+ AA AI+ +NG L+ +V+VG F R++R +
Sbjct: 181 KILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAE 239
Query: 201 --NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
+ + +FTN+Y+ N + DE LK +F +G S VM DS GKS+ FGFV+F S +
Sbjct: 240 LRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHE 299
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
AA AVE++NG N ++ +VGRAQK+ ER+A+L+ FEQ + R +G LY+KNLD
Sbjct: 300 AAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLD 359
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
D+I+DEKL+ FS FG+I+ KVM + G SKG G FS PE+AT+A+ EMNG+++G K
Sbjct: 360 DTIDDEKLRNEFSSFGSISRVKVM-QEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSK 418
Query: 379 PLYVAVAQR 387
PL +A+AQR
Sbjct: 419 PLSIALAQR 427
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 161/288 (55%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L F+ G VLS ++ D +S GY +V F AQ A+
Sbjct: 69 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 128
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + ++ +R +++ NV++ NL +++ ++ L + F FG I S
Sbjct: 129 MNFDIIKGKSIRL-MWSQRDAYLRRS---GIGNVFIKNLDKSIDNKTLYEHFSAFGKILS 184
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ VM D G S+ + FV+FQ+ AA A+E++NG +VGR + R +REA+LR+K
Sbjct: 185 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSK 243
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ N+Y+KN ++DE+LK++FS++G S KVM D G SKG GF
Sbjct: 244 ASE----------FTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFV 293
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+F E A +A+ EMNG+ I + ++V AQ+K ER+A L+ F Q++
Sbjct: 294 SFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLK 341
>gi|432102707|gb|ELK30188.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 650
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 186/389 (47%), Positives = 262/389 (67%), Gaps = 4/389 (1%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
G+ + SLYVGDL V E+ LY+ FS ++SVRVCRD SLGY YVN+ P+DA
Sbjct: 15 GFPSASLYVGDLHPEVTEAMLYEKFSAAGPILSVRVCRDALSSRSLGYGYVNFHRPEDAG 74
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
+A +NF ++GKP+RIM+ HRDPS+R+SG GNVF+ +LD SIDNK L D FA FGT+L
Sbjct: 75 HALNTMNFDVLHGKPVRIMWCHRDPSLRRSGVGNVFVNHLDASIDNKELYDLFAGFGTIL 134
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS 203
SCKV D NG KG+GFV FE EAA AIK +NG L+ +++V+VG F R +R ++ +
Sbjct: 135 SCKVVSDENG-PKGHGFVHFETREAADKAIKEMNGSLVKERKVFVGQFKRPNQREEERRA 193
Query: 204 P--KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
+FTNVYV N A+ TDE L +IF +G ++S +M D GKS+ FGF+ F+ A
Sbjct: 194 KMEQFTNVYVKNFADGTTDEYLLEIFSQYGPLSSVKIMTDDSGKSKGFGFIRFECHADAK 253
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
A+E++NG + YV RAQK+ ERE +L+ K E+ + +R K G +L++KNL +S
Sbjct: 254 RAIEEVNGKQFGGRKIYVSRAQKKKEREEELQQKLEEIKQNRIAKYHGMSLFVKNLAEST 313
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DE L+++F+ FGT+TS KV+V + G KG GF +FS EEA +A+ EM+GKM+ +PLY
Sbjct: 314 DDEHLRKIFAPFGTVTSAKVIV-KGGRRKGFGFVSFSSREEAKKAVEEMHGKMLSARPLY 372
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSP 410
V+ A+ K+ER+A + + + +A SP
Sbjct: 373 VSYARYKQERRAYFASYYGKKKASPAKSP 401
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 59/75 (78%)
Query: 549 LTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
+TS L SASP+D+ ++LGE L+PL++ ++P ASK+ GMLLEMD +E+L L+ESPE+ +
Sbjct: 561 ITSTLVSASPEDQKKILGEWLFPLIQALQPTLASKIMGMLLEMDNSELLLLLESPESFCS 620
Query: 609 KVAEAMAVLQEAAAR 623
KV EA+AVL+ A+
Sbjct: 621 KVDEAVAVLEACQAQ 635
>gi|297674344|ref|XP_002815190.1| PREDICTED: polyadenylate-binding protein 4-like [Pongo abelii]
Length = 428
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 186/369 (50%), Positives = 249/369 (67%), Gaps = 4/369 (1%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
V + Y SLYVGDL +V E L+ FS V V+S+R+CRDQ R SLGYAYVN+
Sbjct: 61 VAAKYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLA 120
Query: 81 DAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
DA A + +NF I GK IR+M+S RD +R+SG GNVFIKNLD SIDNK L + F+AFG
Sbjct: 121 DAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFG 180
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
+LS KV D G SKGY FV F+N+ AA AI+ +NG L+ +V+VG F R++R +
Sbjct: 181 KILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAE 239
Query: 201 --NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
+ + +FTN+Y+ N + DE LK +F +G S VM DS GKS+ FGFV+F S +
Sbjct: 240 LRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHE 299
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
AA AVE++NG N ++ +VGRAQK+ ER+A+L+ FEQ + R +G LY+KNLD
Sbjct: 300 AAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERICGCQGVKLYIKNLD 359
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
D+I+DEKL+ FS FG+I+ KVM + G SKG G FS PE+AT+A+ EMNG+++G K
Sbjct: 360 DTIDDEKLRNEFSSFGSISRVKVM-QEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSK 418
Query: 379 PLYVAVAQR 387
PL +A+AQR
Sbjct: 419 PLSIALAQR 427
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 161/288 (55%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L F+ G VLS ++ D +S GY +V F AQ A+
Sbjct: 69 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 128
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + ++ +R +++ NV++ NL +++ ++ L + F FG I S
Sbjct: 129 MNFDIIKGKSIRL-MWSQRDAYLRRS---GIGNVFIKNLDKSIDNKTLYEHFSAFGKILS 184
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ VM D G S+ + FV+FQ+ AA A+E++NG +VGR + R +REA+LR+K
Sbjct: 185 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSK 243
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ N+Y+KN ++DE+LK++FS++G S KVM D G SKG GF
Sbjct: 244 ASE----------FTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFV 293
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+F E A +A+ EMNG+ I + ++V AQ+K ER+A L+ F Q++
Sbjct: 294 SFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLK 341
>gi|392927774|ref|NP_510259.2| Protein PAB-2, isoform b [Caenorhabditis elegans]
gi|371570799|emb|CAA90446.2| Protein PAB-2, isoform b [Caenorhabditis elegans]
Length = 575
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 205/415 (49%), Positives = 265/415 (63%), Gaps = 44/415 (10%)
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I+G+P+RIM+S RDP+ R++G GN+FIKNLD IDNK++ DTF+ FG +LSCKVA
Sbjct: 1 MNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVA 60
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D G SKGYGFV FE E +AQ AI+ +NGML++DK+VYVG F R +R ++ K+
Sbjct: 61 TDDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKY 120
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNV+V N E + E L +F FG ITSA+VM D+ GK + FGFV F DAA AVEK
Sbjct: 121 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 180
Query: 267 LNGTT--NNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDDSI 321
LN + D V RAQK++ER A+L+ K+E QER+ RY+ G NLY+KN+++ +
Sbjct: 181 LNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQ---GVNLYVKNIEEDL 237
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
ND+ L++ FS FGTITS KVMVD++G SKG GF F PEEAT A+ +MN KMIG KPLY
Sbjct: 238 NDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLY 297
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPG----YHHGAPRLGPQQLYY----- 432
VA+AQRKE+R+A+L +Q+ Q A M ASG+P Y G QQ Y+
Sbjct: 298 VALAQRKEDRRAQLASQYMQRLATLRMGQQASGVPAMTQLYQPG------QQGYFVPNPM 351
Query: 433 -GQGTPGLMPPQAAGYG------FQQQVFPGLRPGGPNYIMPYHL-QRQVHPGQR 479
QG PG P A G FQ Q+F M Y QRQV+P Q+
Sbjct: 352 NAQGRPGFQPQSAQIRGPPGQRVFQNQMF-----------MQYPFNQRQVYPQQQ 395
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Query: 548 TLTS-ALASASPDDRTRMLGEQLYPLVENIEPVH--ASKVTGMLLEMDQTEVLHLIESPE 604
TLTS LA A+P ++ ++LGE++Y L+E + P H A K+TGM+LE+D E++ +++ E
Sbjct: 486 TLTSHMLAQAAPQEQKQLLGERIYALIEKMFPNHKEAGKITGMMLEIDNAELIMMLQDAE 545
Query: 605 ALKTKVAEAMAVL 617
++KV EA VL
Sbjct: 546 LFRSKVEEAFGVL 558
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LYV ++E+++N+ L D FS + S +V D++ RS G+ +V + P++A
Sbjct: 223 YQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSK-GFGFVCFEKPEEATA 281
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDT 125
A +N I KP+ + + R R++ + +++ L T
Sbjct: 282 AVTDMNSKMIGAKPLYVALAQRKED-RRAQLASQYMQRLAT 321
>gi|225442420|ref|XP_002277538.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Vitis vinifera]
Length = 630
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 183/369 (49%), Positives = 256/369 (69%), Gaps = 4/369 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
+LYVGDL+ V+E +L D+FS + +VSVR+CRD SL YAYVN+ +P DA+ A
Sbjct: 30 ALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSDASKALAC 89
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LN + GKP+RIM+SHRDP RK+G N+F+KNLD SI++ +L D F FG +LSCKVA
Sbjct: 90 LNHTKLMGKPMRIMWSHRDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFGNILSCKVA 149
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
+ NG+SK +GFVQF+++++A A+ LN +++ K+++V FV++ ER + + KFTN
Sbjct: 150 -EENGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKLFVSKFVKKCERKEASEETKFTN 208
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
VYV NL E +T++ ++ F FG + + ++MKD +GKSR FGFVNF+SPD A AVE LN
Sbjct: 209 VYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGKSRGFGFVNFESPDEAKKAVEALN 268
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS-RYEKLKGANLYLKNLDDSINDEKLK 327
G K +VGRAQK+AER+ L K E+E ++ K K +NLY+KNLD S++D+KL+
Sbjct: 269 GAMLGSKKLFVGRAQKKAERQELL--KHEKEMVNCNIGKEKASNLYVKNLDASVDDDKLQ 326
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
E FS G ITS KVM G SKG GF FS EEA +AL +NG ++ + LY+A+AQR
Sbjct: 327 EHFSSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTTLNGTLLHGRSLYIAMAQR 386
Query: 388 KEERKARLQ 396
KE+R+ L+
Sbjct: 387 KEDRQRVLR 395
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 154/288 (53%), Gaps = 17/288 (5%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
+P G +L+V +L+ ++N + L D+F + ++S +V + K G +V + +
Sbjct: 110 LPRKTGLANLFVKNLDPSINSASLQDIFCKFGNILSCKVAEENGKSKCFG--FVQFDSDD 167
Query: 81 DAANAKEALNFMPINGKPI----RIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTF 136
A A ALN ++GK + + R + ++ + NV++KNL + + D F
Sbjct: 168 SATAALNALNDTMLDGKKLFVSKFVKKCERKEASEETKFTNVYVKNLGEDLTEDIIRDKF 227
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVG------- 189
+ FG V + + D NG+S+G+GFV FE+ + A+ A++ LNG ++ K+++VG
Sbjct: 228 SEFGKVGTVVIMKDGNGKSRGFGFVNFESPDEAKKAVEALNGAMLGSKKLFVGRAQKKAE 287
Query: 190 ---LFVRRQERAQQNV-SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK 245
L +E N+ K +N+YV NL +V D+ L++ F G ITSA VM+ G
Sbjct: 288 RQELLKHEKEMVNCNIGKEKASNLYVKNLDASVDDDKLQEHFSSCGQITSAKVMRHDSGL 347
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLR 293
S+ FGFV F + + A A+ LNGT + + Y+ AQ++ +R+ LR
Sbjct: 348 SKGFGFVCFSTSEEAQKALTTLNGTLLHGRSLYIAMAQRKEDRQRVLR 395
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 45/59 (76%)
Query: 564 MLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAA 622
++G LYPLV +++P A K+TGMLLEM+ ++++ L++SP++L +V +A+ L+EA A
Sbjct: 552 IIGHHLYPLVHSLQPELAGKITGMLLEMNNSDIIKLLDSPDSLAVQVEQAVQALKEAKA 610
>gi|432097499|gb|ELK27684.1| Polyadenylate-binding protein 4-like protein [Myotis davidii]
Length = 370
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 182/369 (49%), Positives = 254/369 (68%), Gaps = 4/369 (1%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
V + Y SLYVGDL +V E+ L+ FS V V+S+R+CRD R SLGYAYVN+ +
Sbjct: 3 VDAKYRQASLYVGDLPPDVTENMLFLKFSTVGTVLSIRICRDLVTRCSLGYAYVNFLHVA 62
Query: 81 DAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
DA A + +NF I G+ IR+M+S RD +RKSG GNVFIKNLD SIDNK L + F+ FG
Sbjct: 63 DAQRALDTMNFDVIQGQSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSVFG 122
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ- 199
+LS KV D G S+GYGFV F+N+ AA AI+ +NG+L+ D +++VG F R++R
Sbjct: 123 KILSSKVMCDDQG-SRGYGFVHFQNQAAADRAIEEMNGVLLKDFRLFVGPFKNRRDREAE 181
Query: 200 -QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
QN + +FTN+Y+ N + + DE LK+ F H+G I S VM DS GKS+ FGFV+F + +
Sbjct: 182 LQNKASEFTNIYIKNFGDEMDDEKLKEFFSHYGKIVSVKVMTDSSGKSKGFGFVSFDTHE 241
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
AA AV+ +NG + +VGRAQK+AER+A+L+ FEQ + R +++G +Y+KNLD
Sbjct: 242 AAKRAVDIVNGREIFGQQVFVGRAQKKAERQAELKQLFEQRKQERSWRVRGTKIYVKNLD 301
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
++I++EKL++ FS FG+I KVM + G S+G G FS PEEA RA+ EMNG+++G K
Sbjct: 302 ETIDEEKLRKAFSSFGSIIRVKVM-QEEGRSRGFGLICFSSPEEAARAMAEMNGRLLGSK 360
Query: 379 PLYVAVAQR 387
P+ +A+AQR
Sbjct: 361 PVNIALAQR 369
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 162/286 (56%), Gaps = 16/286 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQ-SKGYGFVQFENEEAAQNAIKM 175
++++ +L + L F+ GTVLS ++ D + S GY +V F + AQ A+
Sbjct: 11 SLYVGDLPPDVTENMLFLKFSTVGTVLSIRICRDLVTRCSLGYAYVNFLHVADAQRALDT 70
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I + + + ++ +R +++ NV++ NL +++ ++ L + F FG I S
Sbjct: 71 MNFDVIQGQSIRL-MWSQRDAYLRKS---GIGNVFIKNLDKSIDNKTLYEHFSVFGKILS 126
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ VM D G SR +GFV+FQ+ AA A+E++NG D +VG + R +REA+L
Sbjct: 127 SKVMCDDQG-SRGYGFVHFQNQAAADRAIEEMNGVLLKDFRLFVGPFKNRRDREAEL--- 182
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
Q + S + N+Y+KN D ++DEKLKE FS +G I S KVM D G SKG GF
Sbjct: 183 --QNKASEF-----TNIYIKNFGDEMDDEKLKEFFSHYGKIVSVKVMTDSSGKSKGFGFV 235
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ 401
+F E A RA++ +NG+ I + ++V AQ+K ER+A L+ F Q
Sbjct: 236 SFDTHEAAKRAVDIVNGREIFGQQVFVGRAQKKAERQAELKQLFEQ 281
>gi|297851860|ref|XP_002893811.1| PAB1 binding protein 1 [Arabidopsis lyrata subsp. lyrata]
gi|297339653|gb|EFH70070.1| PAB1 binding protein 1 [Arabidopsis lyrata subsp. lyrata]
Length = 403
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 257/400 (64%), Gaps = 24/400 (6%)
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LNF + GKP+RIM+S RDPS R SG GNVF+KNLD SIDNK L D F+AFG VLSCK
Sbjct: 2 EMLNFYKLKGKPMRIMFSERDPSKRLSGRGNVFVKNLDESIDNKQLSDMFSAFGKVLSCK 61
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF 206
V D++G SKGYGFVQF +E + A + NG LI ++ ++V FV R++ + V F
Sbjct: 62 VVRDASGVSKGYGFVQFYSELSVNIACNVRNGTLIRNQHIHVSPFVSRRQWDESRV---F 118
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV NLAET TD+DLK IF FG ITSA+VMKD +GKSR FGFVNF+ +AA A++K
Sbjct: 119 TNVYVKNLAETTTDDDLKMIFEEFGEITSAVVMKDKEGKSRMFGFVNFEKAEAAVTAIDK 178
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKL-KGANLYLKNLDDSINDEK 325
+NGT ++K +VGRAQ++ R DL+ F+ E+I R K KG NLY+KNLD S+++ K
Sbjct: 179 MNGTIVDEKELHVGRAQRKKNRIQDLKVIFKLEKIKRDMKTRKGTNLYVKNLDYSVDNTK 238
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L+ELFSEFGTI SCKVMV + SKG GF FS EEA++A+ +MNGK++G KP+YV++A
Sbjct: 239 LQELFSEFGTIISCKVMVHPNRISKGVGFVEFSTSEEASKAMLKMNGKVVGNKPIYVSLA 298
Query: 386 QRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAA 445
Q KEE K L QF + P + ++S I H P + Q P + P
Sbjct: 299 QCKEEHKLHLHTQFNNL--PWNV--VSSTIAPSPHQHP-------IFSQAWPPMSIPNTM 347
Query: 446 G--YGFQQQVFPGLRPGG-------PNYIMPYHLQRQVHP 476
Y FQ G R PN+++P + ++P
Sbjct: 348 QRVYNFQSYFMCGSRMSNSCPPMSMPNFMVPQPFRPTIYP 387
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
+LYV +L+ +V+ ++L +LFS+ ++S +V R S G +V +S ++A+ A
Sbjct: 224 NLYVKNLDYSVDNTKLQELFSEFGTIISCKVMV-HPNRISKGVGFVEFSTSEEASKAMLK 282
Query: 89 LNFMPINGKPIRI 101
+N + KPI +
Sbjct: 283 MNGKVVGNKPIYV 295
>gi|147769692|emb|CAN65531.1| hypothetical protein VITISV_039630 [Vitis vinifera]
Length = 555
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 182/365 (49%), Positives = 253/365 (69%), Gaps = 4/365 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
+LYVGDL+ V+E +L D+FS + +VSVR+CRD SL YAYVN+ P DA+ A
Sbjct: 30 ALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFYPSDASKALAC 89
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LN + GKP+RIM+SHRDP RK+G N+F+KNLD SI++ +L D F FG +LSCKVA
Sbjct: 90 LNHTKLMGKPMRIMWSHRDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFGNILSCKVA 149
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
+ NG+SK +GFVQF+++++A A+ LN +++ K+++V FV++ ER + + KFTN
Sbjct: 150 -EENGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKLFVSKFVKKCERKEASEETKFTN 208
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
VYV NL E +T++ ++ F FG + + ++MKD +GKSR FGFVNF+SPD A AVE LN
Sbjct: 209 VYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGKSRGFGFVNFESPDEAKKAVEALN 268
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS-RYEKLKGANLYLKNLDDSINDEKLK 327
G K +VGRAQK+AER+ L K E+E ++ K K +NLY+KNLD S++D+KL+
Sbjct: 269 GAMLGSKKLFVGRAQKKAERQELL--KHEKEMVNCNIGKEKASNLYVKNLDASVDDDKLQ 326
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
E FS G ITS KVM G SKG GF FS EEA +AL +NG ++ + LY+A+AQR
Sbjct: 327 EHFSSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTTLNGTLLHGRSLYIAMAQR 386
Query: 388 KEERK 392
KE+R+
Sbjct: 387 KEDRQ 391
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 152/284 (53%), Gaps = 17/284 (5%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
+P G +L+V +L+ ++N + L D+F + ++S +V + K G +V + +
Sbjct: 110 LPRKTGLANLFVKNLDPSINSASLQDIFCKFGNILSCKVAEENGKSKCFG--FVQFDSDD 167
Query: 81 DAANAKEALNFMPINGKPI----RIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTF 136
A A ALN ++GK + + R + ++ + NV++KNL + + D F
Sbjct: 168 SATAALNALNDTMLDGKKLFVSKFVKKCERKEASEETKFTNVYVKNLGEDLTEDIIRDKF 227
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVG------- 189
+ FG V + + D NG+S+G+GFV FE+ + A+ A++ LNG ++ K+++VG
Sbjct: 228 SEFGKVGTVVIMKDGNGKSRGFGFVNFESPDEAKKAVEALNGAMLGSKKLFVGRAQKKAE 287
Query: 190 ---LFVRRQERAQQNV-SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK 245
L +E N+ K +N+YV NL +V D+ L++ F G ITSA VM+ G
Sbjct: 288 RQELLKHEKEMVNCNIGKEKASNLYVKNLDASVDDDKLQEHFSSCGQITSAKVMRHDSGL 347
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAERE 289
S+ FGFV F + + A A+ LNGT + + Y+ AQ++ +R+
Sbjct: 348 SKGFGFVCFSTSEEAQKALTTLNGTLLHGRSLYIAMAQRKEDRQ 391
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 153/283 (54%), Gaps = 20/283 (7%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKML 176
+++ +LD + L D F+ G ++S ++ DS +G+S Y +V F A A+ L
Sbjct: 31 LYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFYPSDASKALACL 90
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSA 236
N + K + + ++ R ++ N++V NL ++ L+ IF FG I S
Sbjct: 91 NHTKLMGKPMRI-MWSHRDPLPRKT---GLANLFVKNLDPSINSASLQDIFCKFGNILSC 146
Query: 237 IVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAER-EADLRAK 295
V ++ +GKS+CFGFV F S D+A AA+ LN T + K +V + K+ ER EA K
Sbjct: 147 KVAEE-NGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKLFVSKFVKKCERKEASEETK 205
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
F N+Y+KNL + + ++ +++ FSEFG + + +M D +G S+G GF
Sbjct: 206 F-------------TNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGKSRGFGFV 252
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQ 398
F P+EA +A+ +NG M+G K L+V AQ+K ER+ L+ +
Sbjct: 253 NFESPDEAKKAVEALNGAMLGSKKLFVGRAQKKAERQELLKHE 295
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 45/59 (76%)
Query: 564 MLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAA 622
++G LYPLV +++P A K+TGMLLEM+ ++++ L++SP++L +V +A+ L+EA A
Sbjct: 477 IIGHHLYPLVHSLQPELAGKITGMLLEMNNSDIIKLLDSPDSLAVQVEQAVQALKEAKA 535
>gi|453085206|gb|EMF13249.1| polyadenylate binding protein [Mycosphaerella populorum SO2202]
Length = 760
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 217/510 (42%), Positives = 294/510 (57%), Gaps = 84/510 (16%)
Query: 18 TAAVPSGYG--NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVN 75
T+A P+ + SLYVG+L+ +V E+ L++LFS + QV S+RVCRD R SLGYAYVN
Sbjct: 41 TSAAPANANPNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVN 100
Query: 76 YSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDT 135
Y++ D A E LN+ I GKP RIM+S RDP++RK+G+GN+FIKNLD +IDNKAL DT
Sbjct: 101 YNSANDGERALEELNYTLIKGKPCRIMWSQRDPALRKTGHGNIFIKNLDAAIDNKALHDT 160
Query: 136 FAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ 195
FAAFG +LSCKVA D +G S+GYGFV +E EAA AIK +NGML+N+K+V+VG + ++
Sbjct: 161 FAAFGNILSCKVAQDESGGSRGYGFVHYETAEAANAAIKSVNGMLLNEKKVFVGHHIPKK 220
Query: 196 ERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVN 253
+R + + FTN+YV N+ TD++ +++F +G ITSA + +D +GK R FGFVN
Sbjct: 221 DRMSKFEEMKANFTNIYVKNIDTETTDDEFRELFEKYGEITSASLARDQEGKVRGFGFVN 280
Query: 254 FQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLY 313
+ + A AV++LN + YVGRAQK+ ERE +LR ++E +R + K G NLY
Sbjct: 281 YIRHEDANKAVDELNDIDFKSQKLYVGRAQKKHEREEELRRQYEAQRQEKSAKYMGVNLY 340
Query: 314 LKNL----DD-----------SINDEKL-------------------------------- 326
+KNL DD SI K+
Sbjct: 341 VKNLADDIDDEELRKVFEAYGSITSAKVMRDTTPADQVENAEEEKKEDGENEAESSEEKK 400
Query: 327 ---------KELFSEFGTIT---SCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
+EL + T+T KV+ G SKG GF FS P+EAT+A+ E+N KM
Sbjct: 401 EDEKKEDGTEELTKKLDTVTIGGEKKVL----GKSKGFGFVCFSNPDEATKAVTELNQKM 456
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFA---QIRAPGGMSPLASGIPGYHHGAPR--LGPQQ 429
I KPLYVA+AQRKE RK++L+A Q+R A GIP P+ LGP
Sbjct: 457 IHGKPLYVALAQRKEVRKSQLEASIQARNQVRMQ--QQATAGGIPPQAFMQPQFVLGP-- 512
Query: 430 LYYGQGTPGLMPPQAAGYGFQQQVFPGLRP 459
G P ++P G G Q FP + P
Sbjct: 513 ----NGQPIMIP----GSGRGQMPFPQVMP 534
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 564 MLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
MLGE LYP ++ +P A K+TGMLLEMD E+L L + +AL+ KV EA+ V E
Sbjct: 678 MLGEALYPKIQAQQPELAGKITGMLLEMDNEELLGLTTNDDALREKVQEALNVYDE 733
>gi|297743165|emb|CBI36032.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 183/369 (49%), Positives = 256/369 (69%), Gaps = 4/369 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
+LYVGDL+ V+E +L D+FS + +VSVR+CRD SL YAYVN+ +P DA+ A
Sbjct: 30 ALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSDASKALAC 89
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LN + GKP+RIM+SHRDP RK+G N+F+KNLD SI++ +L D F FG +LSCKVA
Sbjct: 90 LNHTKLMGKPMRIMWSHRDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFGNILSCKVA 149
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
+ NG+SK +GFVQF+++++A A+ LN +++ K+++V FV++ ER + + KFTN
Sbjct: 150 -EENGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKLFVSKFVKKCERKEASEETKFTN 208
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
VYV NL E +T++ ++ F FG + + ++MKD +GKSR FGFVNF+SPD A AVE LN
Sbjct: 209 VYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGKSRGFGFVNFESPDEAKKAVEALN 268
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS-RYEKLKGANLYLKNLDDSINDEKLK 327
G K +VGRAQK+AER+ L K E+E ++ K K +NLY+KNLD S++D+KL+
Sbjct: 269 GAMLGSKKLFVGRAQKKAERQELL--KHEKEMVNCNIGKEKASNLYVKNLDASVDDDKLQ 326
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
E FS G ITS KVM G SKG GF FS EEA +AL +NG ++ + LY+A+AQR
Sbjct: 327 EHFSSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTTLNGTLLHGRSLYIAMAQR 386
Query: 388 KEERKARLQ 396
KE+R+ L+
Sbjct: 387 KEDRQRVLR 395
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 154/288 (53%), Gaps = 17/288 (5%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
+P G +L+V +L+ ++N + L D+F + ++S +V + K G +V + +
Sbjct: 110 LPRKTGLANLFVKNLDPSINSASLQDIFCKFGNILSCKVAEENGKSKCFG--FVQFDSDD 167
Query: 81 DAANAKEALNFMPINGKPI----RIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTF 136
A A ALN ++GK + + R + ++ + NV++KNL + + D F
Sbjct: 168 SATAALNALNDTMLDGKKLFVSKFVKKCERKEASEETKFTNVYVKNLGEDLTEDIIRDKF 227
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVG------- 189
+ FG V + + D NG+S+G+GFV FE+ + A+ A++ LNG ++ K+++VG
Sbjct: 228 SEFGKVGTVVIMKDGNGKSRGFGFVNFESPDEAKKAVEALNGAMLGSKKLFVGRAQKKAE 287
Query: 190 ---LFVRRQERAQQNV-SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK 245
L +E N+ K +N+YV NL +V D+ L++ F G ITSA VM+ G
Sbjct: 288 RQELLKHEKEMVNCNIGKEKASNLYVKNLDASVDDDKLQEHFSSCGQITSAKVMRHDSGL 347
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLR 293
S+ FGFV F + + A A+ LNGT + + Y+ AQ++ +R+ LR
Sbjct: 348 SKGFGFVCFSTSEEAQKALTTLNGTLLHGRSLYIAMAQRKEDRQRVLR 395
>gi|38541222|gb|AAH62832.1| Pabpc1a protein, partial [Danio rerio]
Length = 327
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 181/326 (55%), Positives = 232/326 (71%), Gaps = 4/326 (1%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
+ PS Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P
Sbjct: 4 SAPS-YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I G+P+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER-A 198
G +LSCKV D NG SKGYGFV FE EAA+ AI+ +NGML+ND++V+VG F R+ER A
Sbjct: 123 GNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREA 181
Query: 199 QQNVSPK-FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ K FTNVY+ N E + DE LK+IF +G S VM D GKS+ FGFV+F+
Sbjct: 182 EMGARAKEFTNVYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTDDSGKSKGFGFVSFERH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
+ A AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNL
Sbjct: 242 EDAQRAVDEMNGKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQDRMTRYQGVNLYVKNL 301
Query: 318 DDSINDEKLKELFSEFGTITSCKVMV 343
DD ++DE+L++ FS FGTITS KVM+
Sbjct: 302 DDGLDDERLRKEFSPFGTITSAKVMM 327
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L + F+ G +LS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I + V + R + V N+++ NL +++ ++ L F FG I S
Sbjct: 72 MNFDVIKGRPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R EREA++ A+
Sbjct: 128 CKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEMGAR 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN + ++DEKLKE+F ++G S +VM D G SKG GF
Sbjct: 187 AKE----------FTNVYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTDDSGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+F E+A RA++EMNGK + K +YV AQ+K ER+ L+ +F Q++
Sbjct: 237 SFERHEDAQRAVDEMNGKEMNGKQVYVGRAQKKGERQTELKRKFEQMK 284
>gi|400597582|gb|EJP65312.1| polyadenylate-binding protein [Beauveria bassiana ARSEF 2860]
Length = 736
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 178/327 (54%), Positives = 239/327 (73%), Gaps = 2/327 (0%)
Query: 18 TAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYS 77
+A P + SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD R SLGYAYVNY+
Sbjct: 45 NSAAPHPQNSASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYN 104
Query: 78 NPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFA 137
+ D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLD +IDNKAL DTFA
Sbjct: 105 STPDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFA 164
Query: 138 AFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
AFG +LSCKVA D NG SKGYGFV +E +EAAQ AIK +NGML+N+K+VYVG + +++R
Sbjct: 165 AFGNILSCKVAQDENGSSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYVGHHIPKKDR 224
Query: 198 AQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQ 255
+ + FTNVYV N++ VTD++ +++F G +TS+ + ++ DGKSR FGFVNF
Sbjct: 225 QSKFEEMKANFTNVYVKNISPEVTDDEFRELFERHGDVTSSSIAREQDGKSRGFGFVNFT 284
Query: 256 SPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLK 315
+ +AAA AVE+LN + + YVGRAQK+ ERE +LR +E RI + K +G NLY+K
Sbjct: 285 THEAAAKAVEELNNKDLHGQELYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYIK 344
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVM 342
NLDD ++D+KL+ +F+EFG ITS KVM
Sbjct: 345 NLDDDVDDDKLRIMFAEFGPITSAKVM 371
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 153/289 (52%), Gaps = 19/289 (6%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKML 176
+++ LD S+ L + F+ G V S +V D+ +S GY +V + + + A++ L
Sbjct: 57 LYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALEEL 116
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSA 236
N LI + + ++ +R ++ NV++ NL + ++ L F FG I S
Sbjct: 117 NYTLIKGRPCRI-MWSQRDPALRKTGQ---GNVFIKNLDVAIDNKALHDTFAAFGNILSC 172
Query: 237 IVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKF 296
V +D +G S+ +GFV++++ +AA A++ +NG N+K YVG + +R+
Sbjct: 173 KVAQDENGSSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYVGHHIPKKDRQ------- 225
Query: 297 EQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGF 354
S++E++K N+Y+KN+ + D++ +ELF G +TS + +Q G S+G GF
Sbjct: 226 -----SKFEEMKANFTNVYVKNISPEVTDDEFRELFERHGDVTSSSIAREQDGKSRGFGF 280
Query: 355 AAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
F+ E A +A+ E+N K + + LYV AQ+K ER+ L+ + R
Sbjct: 281 VNFTTHEAAAKAVEELNNKDLHGQELYVGRAQKKHEREEELRKSYEAAR 329
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D++ SS GY +V+Y + A
Sbjct: 140 TGQGNV--FIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENG-SSKGYGFVHYETDEAA 196
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIR--------KSGYGNVFIKNLDTSIDNKALCD 134
A + +N M +N K ++ H P K+ + NV++KN+ + + +
Sbjct: 197 QQAIKHVNGMLLNEK--KVYVGHHIPKKDRQSKFEEMKANFTNVYVKNISPEVTDDEFRE 254
Query: 135 TFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRR 194
F G V S +A + +G+S+G+GFV F EAA A++ LN ++ +++YVG ++
Sbjct: 255 LFERHGDVTSSSIAREQDGKSRGFGFVNFTTHEAAAKAVEELNNKDLHGQELYVGRAQKK 314
Query: 195 QERAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMK 240
ER ++ + K+ N+Y+ NL + V D+ L+ +F FG ITSA VM+
Sbjct: 315 HEREEELRKSYEAARIEKASKYQGVNLYIKNLDDDVDDDKLRIMFAEFGPITSAKVMR 372
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%)
Query: 540 RPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHL 599
RP IS L + ++ A P + +MLGE ++P ++ I A K+TGMLLEMD +E+++L
Sbjct: 639 RPGDNNISALQAQISGAPPAQQKQMLGEMIFPKIQAINGELAGKITGMLLEMDNSELINL 698
Query: 600 IESPEALKTKVAEAMAVLQEAAARSDVNEK 629
IE ALK+KV EA+AV E D E+
Sbjct: 699 IEDDAALKSKVDEALAVYDEYVKTQDGGEE 728
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 249 FGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
FGFV F +PD A AV ++N N K YV AQ++ R++ L A +
Sbjct: 429 FGFVCFSNPDDATKAVAEMNQRMINGKPLYVALAQRKDVRKSQLEASIQ 477
>gi|71033649|ref|XP_766466.1| polyadenylate binding protein [Theileria parva strain Muguga]
gi|68353423|gb|EAN34183.1| polyadenylate binding protein, putative [Theileria parva]
Length = 661
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 179/367 (48%), Positives = 252/367 (68%), Gaps = 7/367 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ + SLYVGDL+ +V E+ LY++F+ V V S+RVCRD R SLGYAYVNY + QDA
Sbjct: 24 FSSASLYVGDLKPDVTEAVLYEVFNTVGPVASIRVCRDSVTRKSLGYAYVNYYSTQDAQE 83
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A E LN++ I G P RIM+S+RDPS+R+SG GN+F+KNLD SID K+L DTF+ FG +LS
Sbjct: 84 ALENLNYIEIKGHPTRIMWSNRDPSLRRSGAGNIFVKNLDKSIDTKSLYDTFSHFGPILS 143
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA+D++G SK YGFV +ENEE+A+ AI+ +NGMLI K+V V F+R+Q+R + V
Sbjct: 144 CKVAVDASGASKRYGFVHYENEESAREAIEKVNGMLIGGKRVEVAPFLRKQDRESEEV-- 201
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTN+YV N +E L++ +G ITS ++ +DS G R F FVN++ P+ A V
Sbjct: 202 -FTNLYVRNFPADWDEEALRQFLEKYGEITSMMLKEDSKG--RRFAFVNYKEPEVAKEVV 258
Query: 265 EKLNGTT--NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
LN + + V Q +A+R+ LRA+F +++ +K +NLY+KNLDDS +
Sbjct: 259 NTLNDLKLEESSEPLLVCPHQDKAKRQNLLRAQFNNSTMAQEDKRVTSNLYIKNLDDSFD 318
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE L ELF FGTITS KVM+D + S+G GF F+ P+EAT+A+ M+ K++ KPLYV
Sbjct: 319 DESLGELFKPFGTITSSKVMLDANNHSRGFGFVCFTNPQEATKAIAAMHLKLVKGKPLYV 378
Query: 383 AVAQRKE 389
+A++++
Sbjct: 379 GLAEKRD 385
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 147/302 (48%), Gaps = 26/302 (8%)
Query: 101 IMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYG 159
+M RD + S ++++ +L + L + F G V S +V DS +S GY
Sbjct: 14 MMMPMRDTQVFSSA--SLYVGDLKPDVTEAVLYEVFNTVGPVASIRVCRDSVTRKSLGYA 71
Query: 160 FVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVT 219
+V + + + AQ A++ LN + I + ++ R +++ + N++V NL +++
Sbjct: 72 YVNYYSTQDAQEALENLNYIEIKGHPTRI-MWSNRDPSLRRSGA---GNIFVKNLDKSID 127
Query: 220 DEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYV 279
+ L F HFG I S V D+ G S+ +GFV++++ ++A A+EK+NG K V
Sbjct: 128 TKSLYDTFSHFGPILSCKVAVDASGASKRYGFVHYENEESAREAIEKVNGMLIGGKRVEV 187
Query: 280 GRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSC 339
++ +RE+ +E + NLY++N ++E L++ ++G ITS
Sbjct: 188 APFLRKQDRES-------EEVFT--------NLYVRNFPADWDEEALRQFLEKYGEITSM 232
Query: 340 KVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI--GRKPLYVAVAQRKEERKARLQA 397
+ D G + F + PE A +N +N + +PL V Q K +R+ L+A
Sbjct: 233 MLKEDSKG--RRFAFVNYKEPEVAKEVVNTLNDLKLEESSEPLLVCPHQDKAKRQNLLRA 290
Query: 398 QF 399
QF
Sbjct: 291 QF 292
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 43/59 (72%)
Query: 563 RMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAA 621
+M+GE+L+P++ P A K+TGM+LE+D E+L L+E + LK K+ EA+ VL++A+
Sbjct: 603 QMIGERLFPIIARDNPDLAGKITGMMLEIDNHELLQLLEDNDQLKAKIDEAIKVLKQAS 661
>gi|403271841|ref|XP_003927812.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Saimiri boliviensis boliviensis]
Length = 647
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/369 (49%), Positives = 247/369 (66%), Gaps = 4/369 (1%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
V + Y SLYVGDL +V E L+ FS V+S+R+CRDQ R SLGYAYVN+ +
Sbjct: 280 VEAKYRMASLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQLTRRSLGYAYVNFLHLA 339
Query: 81 DAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
DA A + +NF I GK IR+M+S RD +R+SG GNVFIKNLD SIDNK L + F+AFG
Sbjct: 340 DAQKALDTMNFDVIQGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFG 399
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
+LS KV D G SKGY FV F+N+ AA AI+ +NG L+ +V+VG F RQ+R +
Sbjct: 400 RILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLQGCKVFVGRFKSRQDREAE 458
Query: 201 --NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
+ + +FTNVY+ N + DE LK +F +G S VM DS GKS+ FGFV+F S +
Sbjct: 459 LRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHE 518
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
AA AVE++NG N ++ +V RAQK+ ER+A+L+ FEQ + R + LY+KNLD
Sbjct: 519 AAKKAVEEMNGRDINGQLIFVARAQKKVERQAELKQMFEQLKNERIRGCQVVKLYVKNLD 578
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
D+I+DEKL++ FS FG+I+ KVM + G SKG G FS PE+A +A+ EMNG+++G K
Sbjct: 579 DTIDDEKLRKEFSSFGSISRVKVM-QEEGQSKGFGLICFSSPEDALKAMTEMNGRILGSK 637
Query: 379 PLYVAVAQR 387
PL +A+AQR
Sbjct: 638 PLSIALAQR 646
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 164/288 (56%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L F+A G VLS ++ D +S GY +V F + AQ A+
Sbjct: 288 SLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQLTRRSLGYAYVNFLHLADAQKALDT 347
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + ++ +R +++ NV++ NL +++ ++ L + F FG I S
Sbjct: 348 MNFDVIQGKSIRL-MWSQRDAYLRRS---GIGNVFIKNLDKSIDNKTLYEHFSAFGRILS 403
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ VM D G S+ + FV+FQ+ AA A+E++NG +VGR + R +REA+LR+K
Sbjct: 404 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLQGCKVFVGRFKSRQDREAELRSK 462
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ N+Y+KN ++DE+LK++FS++G S KVM D G SKG GF
Sbjct: 463 ASEF----------TNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFV 512
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+F E A +A+ EMNG+ I + ++VA AQ+K ER+A L+ F Q++
Sbjct: 513 SFDSHEAAKKAVEEMNGRDINGQLIFVARAQKKVERQAELKQMFEQLK 560
>gi|390460450|ref|XP_002745401.2| PREDICTED: polyadenylate-binding protein 4-like [Callithrix
jacchus]
Length = 384
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 186/373 (49%), Positives = 249/373 (66%), Gaps = 4/373 (1%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
V + Y SLYVGDL +V E L+ FS V V+S+R+CRDQ RSSLGYAYVN+ +
Sbjct: 3 VEAKYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRSSLGYAYVNFLHLA 62
Query: 81 DAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
DA A + +NF I GK IR+M+S RD +R+SG GNVFIKNLD SIDNK L + F+AFG
Sbjct: 63 DAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFG 122
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
+LS KV D G SKGY FV F+N+ AA AI+ +NG L+ +V+VG F R++R +
Sbjct: 123 KILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLQGCKVFVGRFKSRKDREAE 181
Query: 201 --NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
+ + +FTNVY+ N + DE LK +F +G S VM DS GKS+ FGFV+F S +
Sbjct: 182 LRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHE 241
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
AA AVE++NG N ++ +V RAQK+ ER+A+L+ FEQ + R + LY+KNLD
Sbjct: 242 AAKKAVEEMNGRDINGQLIFVARAQKKVERQAELKQMFEQLKKERIRGCQVVKLYVKNLD 301
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
D+I+DEKL+ FS FG+I+ KVM + G SKG G FS PE+A +A+ EMNG+++G K
Sbjct: 302 DTIDDEKLRNEFSSFGSISRVKVM-QEEGQSKGFGLICFSSPEDALKAMTEMNGRILGSK 360
Query: 379 PLYVAVAQRKEER 391
PL +A+AQ E R
Sbjct: 361 PLSIALAQCSELR 373
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 162/288 (56%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKM 175
++++ +L + L F+ G VLS ++ D +S GY +V F + AQ A+
Sbjct: 11 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRSSLGYAYVNFLHLADAQKALDT 70
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + ++ +R ++ NV++ NL +++ ++ L + F FG I S
Sbjct: 71 MNFDIIKGKSIRL-MWSQRDAYLRR---SGIGNVFIKNLDKSIDNKTLYEHFSAFGKILS 126
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ VM D G S+ + FV+FQ+ AA A+E++NG +VGR + R +REA+LR+K
Sbjct: 127 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLQGCKVFVGRFKSRKDREAELRSK 185
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ N+Y+KN ++DE+LK++FS++G S KVM D G SKG GF
Sbjct: 186 ASE----------FTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFV 235
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+F E A +A+ EMNG+ I + ++VA AQ+K ER+A L+ F Q++
Sbjct: 236 SFDSHEAAKKAVEEMNGRDINGQLIFVARAQKKVERQAELKQMFEQLK 283
>gi|84998214|ref|XP_953828.1| polyadenylate (poly(A)) binding protein [Theileria annulata]
gi|65304825|emb|CAI73150.1| polyadenylate (poly(A)) binding protein, putative [Theileria
annulata]
Length = 664
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 179/367 (48%), Positives = 253/367 (68%), Gaps = 7/367 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ + SLYVGDL+ +V E+ LY++F+ V V S+RVCRD R SLGYAYVNY + QDA
Sbjct: 24 FSSASLYVGDLKPDVTEAVLYEVFNTVGPVASIRVCRDSVTRKSLGYAYVNYYSTQDAEA 83
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A E+LN++ I G P RIM+S+RDPS+R+SG GN+F+KNLD SID K+L DTF+ FG +LS
Sbjct: 84 ALESLNYIEIKGHPTRIMWSNRDPSLRRSGAGNIFVKNLDKSIDTKSLYDTFSHFGPILS 143
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CKVA+D++G SK YGFV +ENEE+A+ AI+ +NGMLI K+V V F+R+Q+R + V
Sbjct: 144 CKVAVDASGASKRYGFVHYENEESAREAIEKVNGMLIGGKRVEVAPFLRKQDREGEEV-- 201
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTN+YV N +E L++ +G ITS ++ +DS G R F FVN++ P+ A V
Sbjct: 202 -FTNLYVRNFPADWNEEALRQFLEKYGEITSMMLKEDSKG--RRFAFVNYKEPEVAKEVV 258
Query: 265 EKLNGTTNND--KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
LN ++ + V Q +A+R+ LRA+F + + +K +NLY+KNLDDS +
Sbjct: 259 NTLNDLKLDESSEPLLVCPHQDKAKRQNLLRAQFNNSSMGQEDKRVTSNLYIKNLDDSFD 318
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE L ELF FGTITS KVM+D + S+G GF F+ P+EAT+A+ M+ K++ KPLYV
Sbjct: 319 DESLGELFKPFGTITSSKVMLDANNHSRGFGFVCFTNPQEATKAIAAMHLKLVKGKPLYV 378
Query: 383 AVAQRKE 389
+A++++
Sbjct: 379 GLAEKRD 385
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 43/59 (72%)
Query: 563 RMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAA 621
+M+GE+L+P++ P A K+TGM+LE+D E+L L+E + LK K+ EA+ VL++A+
Sbjct: 606 QMIGERLFPIIARDNPDLAGKITGMMLEIDNHELLQLLEDNDQLKAKIDEAIKVLKQAS 664
>gi|385281386|gb|AFI57844.1| polyA binding protein, partial [Cocos nucifera]
Length = 352
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 182/312 (58%), Positives = 238/312 (76%), Gaps = 7/312 (2%)
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
EEAA NAI+ LNGML+NDK+V+VG F+R+Q+R S KF NV+V NL+E+ T+++L +
Sbjct: 6 EEAAHNAIEKLNGMLLNDKKVFVGPFLRKQDRENTANSTKFNNVFVKNLSESTTEDNLLE 65
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
IFG +G ITSA+VM++ DGKS+CFGFVNF+ P+ AA AV++LNG + K WYVG+AQK+
Sbjct: 66 IFGEYGNITSAVVMREGDGKSKCFGFVNFEDPEHAAKAVKELNGKKFDGKEWYVGKAQKK 125
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
+ERE +L+ +FEQ +K +GANLYLKNLDDSI D+KL+ELFSEFG+ITSCKVM D
Sbjct: 126 SEREMELKGRFEQRMQEAADKNQGANLYLKNLDDSIGDDKLRELFSEFGSITSCKVMRDP 185
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAP 405
+G S+GSGF AF P++A++AL EMNGKMIG KPLYVA+AQRKE+R+ARLQAQF+Q+R P
Sbjct: 186 NGVSRGSGFVAFQSPDDASKALAEMNGKMIGSKPLYVALAQRKEDRRARLQAQFSQMR-P 244
Query: 406 GGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPG---G 461
+ P +A +P Y GAP +G QQL+YGQ + P G+GFQQ + PG+RPG
Sbjct: 245 VAIPPSVAPRVPMYPAGAPGMG-QQLFYGQPP-PTLIPPQPGFGFQQPLVPGMRPGVAAM 302
Query: 462 PNYIMPYHLQRQ 473
PN+ MP Q Q
Sbjct: 303 PNFYMPLVQQGQ 314
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 137/243 (56%), Gaps = 19/243 (7%)
Query: 76 YSNPQDAA-NAKEALNFMPINGKPIRI----MYSHRDPSIRKSGYGNVFIKNLDTSIDNK 130
Y +P++AA NA E LN M +N K + + R+ + + + NVF+KNL S
Sbjct: 2 YVDPEEAAHNAIEKLNGMLLNDKKVFVGPFLRKQDRENTANSTKFNNVFVKNLSESTTED 61
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L + F +G + S V + +G+SK +GFV FE+ E A A+K LNG + K+ YVG
Sbjct: 62 NLLEIFGEYGNITSAVVMREGDGKSKCFGFVNFEDPEHAAKAVKELNGKKFDGKEWYVGK 121
Query: 191 FVRRQERAQQNVSPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAI 237
++ ER + + +F N+Y+ NL +++ D+ L+++F FG+ITS
Sbjct: 122 AQKKSER-EMELKGRFEQRMQEAADKNQGANLYLKNLDDSIGDDKLRELFSEFGSITSCK 180
Query: 238 VMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
VM+D +G SR GFV FQSPD A+ A+ ++NG K YV AQ++ +R A L+A+F
Sbjct: 181 VMRDPNGVSRGSGFVAFQSPDDASKALAEMNGKMIGSKPLYVALAQRKEDRRARLQAQFS 240
Query: 298 QER 300
Q R
Sbjct: 241 QMR 243
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 100/185 (54%), Gaps = 17/185 (9%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
+++V +L ++ E L ++F + + S V R+ +S + +VN+ +P+ AA A +
Sbjct: 48 NVFVKNLSESTTEDNLLEIFGEYGNITSAVVMREGDGKSKC-FGFVNFEDPEHAAKAVKE 106
Query: 89 LNFMPINGKPIRI----MYSHRDPSIR------------KSGYGNVFIKNLDTSIDNKAL 132
LN +GK + S R+ ++ K+ N+++KNLD SI + L
Sbjct: 107 LNGKKFDGKEWYVGKAQKKSEREMELKGRFEQRMQEAADKNQGANLYLKNLDDSIGDDKL 166
Query: 133 CDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFV 192
+ F+ FG++ SCKV D NG S+G GFV F++ + A A+ +NG +I K +YV L
Sbjct: 167 RELFSEFGSITSCKVMRDPNGVSRGSGFVAFQSPDDASKALAEMNGKMIGSKPLYVALAQ 226
Query: 193 RRQER 197
R+++R
Sbjct: 227 RKEDR 231
>gi|426247620|ref|XP_004023599.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Ovis aries]
Length = 383
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 186/374 (49%), Positives = 255/374 (68%), Gaps = 9/374 (2%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
+ + Y SLYVGDL +V E L+ FS V V+S+ C +S LGYAYVN+
Sbjct: 3 IAAKYRQASLYVGDLHADVTEDLLFKKFSAVGPVLSI-TCHPRS----LGYAYVNFLQLA 57
Query: 81 DAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
DA A + +NF I GK IR+M+S RD +RKSG GNVFIKNLD SIDNK L + F+AFG
Sbjct: 58 DAQKALDTMNFDLIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLDRSIDNKTLYEHFSAFG 117
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ- 199
+LS KV D +G S+GY FV F+N+ AA AI+ +NG L+ D +++VG F R++R
Sbjct: 118 KILSSKVMSDDHG-SRGYAFVHFQNQIAADRAIEEMNGTLLKDCRLFVGRFKSRKDREAE 176
Query: 200 -QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
QN + +FTNVY+ N + + DE LK++F +G S VM DS GKS+ FGFV+F S +
Sbjct: 177 FQNKAHEFTNVYIKNFGDEMDDERLKEVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHE 236
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
AA AVE++NG N ++ +VGRAQK+AER+A+L+ FEQ + R+ + +GA LY+KNLD
Sbjct: 237 AAKRAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQLKHERFRRCRGAKLYIKNLD 296
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
++I+DEKL+ FS FG+I+ KVM ++ G SKG G FS EEAT+A+ EMNG+++G K
Sbjct: 297 ETIDDEKLRREFSSFGSISRVKVMQEE-GRSKGFGLICFSSAEEATKAMTEMNGRILGSK 355
Query: 379 PLYVAVAQRKEERK 392
PL +A+AQ+ ERK
Sbjct: 356 PLNIALAQKPXERK 369
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 161/287 (56%), Gaps = 19/287 (6%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
++++ +L + L F+A G VLS I + +S GY +V F AQ A+ +
Sbjct: 11 SLYVGDLHADVTEDLLFKKFSAVGPVLS----ITCHPRSLGYAYVNFLQLADAQKALDTM 66
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSA 236
N LI K + + ++ +R +++ NV++ NL ++ ++ L + F FG I S+
Sbjct: 67 NFDLIKGKSIRL-MWSQRDAYLRKS---GIGNVFIKNLDRSIDNKTLYEHFSAFGKILSS 122
Query: 237 IVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKF 296
VM D G SR + FV+FQ+ AA A+E++NGT D +VGR + R +REA+ + K
Sbjct: 123 KVMSDDHG-SRGYAFVHFQNQIAADRAIEEMNGTLLKDCRLFVGRFKSRKDREAEFQNKA 181
Query: 297 EQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAA 356
+ N+Y+KN D ++DE+LKE+FS++G S KVM D G SKG GF +
Sbjct: 182 HE----------FTNVYIKNFGDEMDDERLKEVFSKYGKTLSVKVMTDSSGKSKGFGFVS 231
Query: 357 FSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
F E A RA+ EMNGK I + L+V AQ+K ER+A L+ F Q++
Sbjct: 232 FDSHEAAKRAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQLK 278
>gi|344304706|gb|EGW34938.1| hypothetical protein SPAPADRAFT_58066 [Spathaspora passalidarum
NRRL Y-27907]
Length = 508
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 225/532 (42%), Positives = 308/532 (57%), Gaps = 57/532 (10%)
Query: 102 MYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFV 161
M+S RDPS R+SG GN+FIKNL +IDNKAL DTF+AFG +LSCKVA D GQSK +GFV
Sbjct: 1 MWSQRDPSSRRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSCKVATDDMGQSKCFGFV 60
Query: 162 QFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVT 219
+E EAA+ AI+ +NGML+ND++VYVG + +++R + + +TN+YV N+ +
Sbjct: 61 HYETAEAAEAAIENVNGMLLNDREVYVGKHISKKDRESKFEEMKANYTNIYVKNIDLEFS 120
Query: 220 DEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYV 279
DE+ +K+F FGTITS + KD DGKS+ FGFVN+++ ++A AVE+LN N + YV
Sbjct: 121 DEEFEKLFVPFGTITSIYLEKDQDGKSKGFGFVNYETHESAVKAVEELNDKEINGQKIYV 180
Query: 280 GRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSC 339
GRAQK+ ER +L+ ++E R+ R K +G NL++KNLDDSI+ EKL+E F FG+ITS
Sbjct: 181 GRAQKKRERMEELKKQYESTRVERLSKYQGVNLFVKNLDDSIDSEKLEEEFKPFGSITSA 240
Query: 340 KVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQF 399
KVMVD+ G SKG GF FS PEEAT+A+ EMN +MI KPLYVA+AQRK+ R+++L+ Q
Sbjct: 241 KVMVDEAGKSKGFGFVCFSSPEEATKAITEMNQRMILGKPLYVALAQRKDVRRSQLEQQI 300
Query: 400 AQIRAPGGMSPLAS--GIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGL 457
Q R M A+ GIPG + P ++YGQ G PP G FPG
Sbjct: 301 -QARNQMRMQNAAASGGIPGQF-----IPP--MFYGQ--QGFFPPNGRG----NAPFPGP 346
Query: 458 RPG-----GPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARN 512
P G + P R GQ V Q Q MR +G Y + +N
Sbjct: 347 NPQMMMRRGQQFPGPEQWPRPGPNGQPVPVYGIPPQFQDFNGQPMRQQQRGGYYPNRNQN 406
Query: 513 -GTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYP 571
G Q L + +A+A PD + R+LGE+LYP
Sbjct: 407 KGGRQQ-----------------------------KDLAAIIANAPPDQQKRILGEELYP 437
Query: 572 LV----ENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
+ + EP A K+TGM+L ++ E+L L+E E +A+ +E
Sbjct: 438 KIVATGKAQEPEAAGKITGMMLGLENQEILDLLEDDELFNNHFEDALTAFEE 489
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 96/189 (50%), Gaps = 17/189 (8%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++YV +++ ++ + LF + S+ + +DQ +S G+ +VNY + A A E
Sbjct: 108 TNIYVKNIDLEFSDEEFEKLFVPFGTITSIYLEKDQDGKSK-GFGFVNYETHESAVKAVE 166
Query: 88 ALNFMPINGKPIRI----------------MYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
LN ING+ I + S R + K N+F+KNLD SID++
Sbjct: 167 ELNDKEINGQKIYVGRAQKKRERMEELKKQYESTRVERLSKYQGVNLFVKNLDDSIDSEK 226
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L + F FG++ S KV +D G+SKG+GFV F + E A AI +N +I K +YV L
Sbjct: 227 LEEEFKPFGSITSAKVMVDEAGKSKGFGFVCFSSPEEATKAITEMNQRMILGKPLYVALA 286
Query: 192 VRRQERAQQ 200
R+ R Q
Sbjct: 287 QRKDVRRSQ 295
>gi|414588969|tpg|DAA39540.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 281
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 168/240 (70%), Positives = 206/240 (85%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL ++V ++QL+D+FSQV VVSVRVCRD + R SLGYAYVNY+N DAA A E
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF PINGKPIRIMYS+RDPS RKSG GN+FIKNLD SIDNKAL DTF AFG +LSCK+A
Sbjct: 96 LNFTPINGKPIRIMYSNRDPSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFGNILSCKIA 155
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
D +G+S+GYGFVQFE +E+AQ+AI LNGMLINDK+V+VG FVR+Q+R + + KF+N
Sbjct: 156 TDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRKQDRENVSSNIKFSN 215
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
VYV NL++TVTD++LK++FG +GTITSA+VM+DSDGKSRCFGFVNF++ DAAA AV++LN
Sbjct: 216 VYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQELN 275
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 148/259 (57%), Gaps = 17/259 (6%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNG-QSKGYGFVQFENEEAAQNAIKML 176
+++ +L S+ + L D F+ G V+S +V D N +S GY +V + N+ A A+++L
Sbjct: 37 LYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALELL 96
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSA 236
N IN K + + ++ R ++++ + N+++ NL +++ ++ L F FG I S
Sbjct: 97 NFTPINGKPIRI-MYSNRDPSSRKSGTG---NIFIKNLDKSIDNKALYDTFCAFGNILSC 152
Query: 237 IVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKF 296
+ D G+SR +GFV F+ ++A +A++KLNG NDK +VG ++ +RE
Sbjct: 153 KIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRKQDRE------- 205
Query: 297 EQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAA 356
+ +K +N+Y+KNL D++ D++LKE+F ++GTITS VM D G S+ GF
Sbjct: 206 -----NVSSNIKFSNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVN 260
Query: 357 FSMPEEATRALNEMNGKMI 375
F + A +A+ E+N ++
Sbjct: 261 FENADAAAQAVQELNDGVV 279
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 17/187 (9%)
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG-KSRCFGFVNFQSPDAAAAAVE 265
T++YV +L E+V D L +F G + S V +D + KS + +VN+ + AA A+E
Sbjct: 35 TSLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALE 94
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LN T N K +R + S + G N+++KNLD SI+++
Sbjct: 95 LLNFTPINGK---------------PIRIMYSNRDPSSRKSGTG-NIFIKNLDKSIDNKA 138
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L + F FG I SCK+ D G S+G GF F E A A++++NG +I K ++V
Sbjct: 139 LYDTFCAFGNILSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPF 198
Query: 386 QRKEERK 392
RK++R+
Sbjct: 199 VRKQDRE 205
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 92/168 (54%), Gaps = 17/168 (10%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ ++ +L+++++ LYD F ++S ++ D S S GY +V + + A
Sbjct: 120 SGTGNI--FIKNLDKSIDNKALYDTFCAFGNILSCKIATDPSGESR-GYGFVQFEKDESA 176
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSG---------YGNVFIKNLDTSIDNKALC 133
+A + LN M IN K + + P +RK + NV++KNL ++ + L
Sbjct: 177 QSAIDKLNGMLINDKKVFV-----GPFVRKQDRENVSSNIKFSNVYVKNLSDTVTDDELK 231
Query: 134 DTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLI 181
+ F +GT+ S V DS+G+S+ +GFV FEN +AA A++ LN ++
Sbjct: 232 EMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQELNDGVV 279
>gi|296815242|ref|XP_002847958.1| polyadenylate-binding protein [Arthroderma otae CBS 113480]
gi|238840983|gb|EEQ30645.1| polyadenylate-binding protein [Arthroderma otae CBS 113480]
Length = 708
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 173/302 (57%), Positives = 221/302 (73%), Gaps = 3/302 (0%)
Query: 44 LYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMY 103
LY+LFS + QV S+RVCRD R SLGYAYVNY+N D A E LN+ I G+P RIM+
Sbjct: 2 LYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGRPCRIMW 61
Query: 104 SHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQF 163
S RDP++RK+G GNVFIKNLDT+IDNKAL DTFAAFG +LSCKVA D G SKGYGFV +
Sbjct: 62 SQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEYGNSKGYGFVHY 121
Query: 164 ENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAETVTDE 221
E EAA NAIK +NGML+N+K+V+VG + +++R + + FTN+YV N+ + VTDE
Sbjct: 122 ETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDE 181
Query: 222 DLKKIFGHFGTITSAIVMKDSD-GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVG 280
+ + +F +G ITSA + +D++ GKSR FGFVNF +AA+AAVE LN + YVG
Sbjct: 182 EFRALFEKYGDITSATLSRDNETGKSRGFGFVNFSDHEAASAAVEGLNEYELKGQKLYVG 241
Query: 281 RAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCK 340
RAQK+ ERE +LR ++E RI + K +G NLY+KNL D I+DEKL+ELFS +G ITS K
Sbjct: 242 RAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGNITSAK 301
Query: 341 VM 342
VM
Sbjct: 302 VM 303
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 176/652 (26%), Positives = 296/652 (45%), Gaps = 96/652 (14%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D+ S GY +V+Y + A
Sbjct: 71 TGQGNV--FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEYGNSK-GYGFVHYETAEAA 127
Query: 83 ANAKEALNFMPINGKPIRIMY--SHRDPSIR----KSGYGNVFIKNLDTSIDNKALCDTF 136
NA + +N M +N K + + + + +D + K+ + N+++KN++ + ++ F
Sbjct: 128 TNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRALF 187
Query: 137 AAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ 195
+G + S ++ D+ G+S+G+GFV F + EAA A++ LN + +++YVG R Q
Sbjct: 188 EKYGDITSATLSRDNETGKSRGFGFVNFSDHEAASAAVEGLNEYELKGQKLYVG---RAQ 244
Query: 196 ERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQ 255
++ ++ +E+L+K + +A + K S + N
Sbjct: 245 KKHER-------------------EEELRKQY------EAARIEKASKYQGVNLYIKNL- 278
Query: 256 SPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKG-ANLYL 314
S D + +L + N + A+ E A++ + ++++ + EK KG A
Sbjct: 279 SDDIDDEKLRELFSSYGN-----ITSAKVMREATAEVPTESDKDKEADKEKAKGEAGEKT 333
Query: 315 KNLDDSINDEK--LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNG 372
+ + D+K K G K G SKG GF FS P+EA++A+ EMN
Sbjct: 334 EEGPEGKTDDKSEEKTEEKTEGKTEGAKPEKKHLGKSKGFGFVCFSNPDEASKAVTEMNQ 393
Query: 373 KMIGRKPLYVAVAQRKEERKARLQAQFA--------QIRAPGGM------------SPLA 412
+M+ KPLYVA+AQRK+ RK++L+A Q+ A GM +P
Sbjct: 394 RMVHGKPLYVALAQRKDVRKSQLEASIQARNTIRQQQVAAAAGMPQPFMQPAVFYGTPGQ 453
Query: 413 SG-IPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMP--YH 469
G +PG G + Q G PG P Q A + QQ G R PN +P +
Sbjct: 454 QGFLPGAQRGGMQFAGQAGMVMPGMPGGRPAQFAQFPGQQ----GGRGMNPNQPLPPNFA 509
Query: 470 LQRQVHPG---QRTGVRRSGNTHQMQQPQ-FMRNSNQG--IRYLDNARNGTDQSVVSMVP 523
+ Q P Q G+ N QM Q Q F R +G ++ + A P
Sbjct: 510 MGGQSLPMGAMQGAGMPNGLNYPQMAQVQSFGRGGGRGQPMQGMPPATGNAPPIRGPGGP 569
Query: 524 VPFEVSGMP---------------ATPVETPRPVPVPISTLTSALASASPD-DRTRMLGE 567
+ MP PR S++ +A+P+ + +MLGE
Sbjct: 570 GFSQGRNMPMQGGRPGPGGRGQGAPGQGGMPRDETAGPSSINLQAFNAAPEPQQKQMLGE 629
Query: 568 QLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
+YP V +P A K+TGMLLEMD +E++ L++ AL+ KV EA+ V E
Sbjct: 630 AIYPKVLAQQPELAGKITGMLLEMDNSELIGLVDDDAALRAKVDEALTVYDE 681
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 147/276 (53%), Gaps = 20/276 (7%)
Query: 132 LCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L + F++ G V S +V D+ +S GY +V + N + A++ LN LI + + +
Sbjct: 2 LYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGRPCRI-M 60
Query: 191 FVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFG 250
+ +R ++ NV++ NL + ++ L F FG I S V +D G S+ +G
Sbjct: 61 WSQRDPALRKTGQ---GNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEYGNSKGYG 117
Query: 251 FVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKG- 309
FV++++ +AA A++ +NG N+K +VG + +R+ S++E++K
Sbjct: 118 FVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQ------------SKFEEMKAN 165
Query: 310 -ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD-QHGFSKGSGFAAFSMPEEATRAL 367
N+Y+KN++ + DE+ + LF ++G ITS + D + G S+G GF FS E A+ A+
Sbjct: 166 FTNIYVKNVEQDVTDEEFRALFEKYGDITSATLSRDNETGKSRGFGFVNFSDHEAASAAV 225
Query: 368 NEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+N + + LYV AQ+K ER+ L+ Q+ R
Sbjct: 226 EGLNEYELKGQKLYVGRAQKKHEREEELRKQYEAAR 261
>gi|417399827|gb|JAA46899.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 370
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 181/370 (48%), Positives = 255/370 (68%), Gaps = 4/370 (1%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
+V + Y + SLYVGDL +V E L+ F+ V V+S+R+CRD R SLGYAYVN+ N
Sbjct: 2 SVDAKYRHASLYVGDLPADVTEDMLFRKFNPVGPVLSIRICRDLVTRRSLGYAYVNFLNL 61
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA + +NF I GK IR+M+S RD +RKSG GNVFIKNLD SIDNK L + F+AF
Sbjct: 62 ADAQKVLDTMNFDMIQGKSIRLMWSQRDAYLRKSGIGNVFIKNLDRSIDNKMLYEHFSAF 121
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LS KV D G S+GY FV F+++ AA AI+ +NG L+ + +++VG F R+ER
Sbjct: 122 GKILSSKVMSDDKG-SRGYAFVHFQSQSAADRAIEEMNGALLKNCRLFVGPFKNRKEREA 180
Query: 200 --QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
QN + +FTNVY+ N + + DE LK++F +G I S VM DS GKS+ FGFV+F +
Sbjct: 181 ELQNKANEFTNVYIKNFGDDMDDERLKEVFSQYGKIVSVKVMTDSSGKSKGFGFVSFDTH 240
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
+AA AVE +NG ++ +VGRAQK+AER+A+L+ FEQ + R+ + +G LY+KNL
Sbjct: 241 EAAQRAVEYMNGKDICGQMVFVGRAQKKAERQAELKQMFEQLKRERFGRCRGVKLYIKNL 300
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
D++I++E+L+ FS FG+++ KVM ++ G SKG G FS PEEAT+A+ EMNG+++G
Sbjct: 301 DETIDEEQLRRAFSSFGSMSRVKVM-EEEGRSKGFGLICFSCPEEATKAMAEMNGQVLGS 359
Query: 378 KPLYVAVAQR 387
K + +A+AQR
Sbjct: 360 KAINIALAQR 369
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 161/293 (54%), Gaps = 16/293 (5%)
Query: 112 KSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQ 170
K + ++++ +L + L F G VLS ++ D +S GY +V F N AQ
Sbjct: 6 KYRHASLYVGDLPADVTEDMLFRKFNPVGPVLSIRICRDLVTRRSLGYAYVNFLNLADAQ 65
Query: 171 NAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHF 230
+ +N +I K + + ++ +R +++ NV++ NL ++ ++ L + F F
Sbjct: 66 KVLDTMNFDMIQGKSIRL-MWSQRDAYLRKS---GIGNVFIKNLDRSIDNKMLYEHFSAF 121
Query: 231 GTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREA 290
G I S+ VM D G SR + FV+FQS AA A+E++NG + +VG + R EREA
Sbjct: 122 GKILSSKVMSDDKG-SRGYAFVHFQSQSAADRAIEEMNGALLKNCRLFVGPFKNRKEREA 180
Query: 291 DLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSK 350
+L+ K + N+Y+KN D ++DE+LKE+FS++G I S KVM D G SK
Sbjct: 181 ELQNKANE----------FTNVYIKNFGDDMDDERLKEVFSQYGKIVSVKVMTDSSGKSK 230
Query: 351 GSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G GF +F E A RA+ MNGK I + ++V AQ+K ER+A L+ F Q++
Sbjct: 231 GFGFVSFDTHEAAQRAVEYMNGKDICGQMVFVGRAQKKAERQAELKQMFEQLK 283
>gi|397575959|gb|EJK49989.1| hypothetical protein THAOC_31088, partial [Thalassiosira oceanica]
Length = 690
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 203/440 (46%), Positives = 271/440 (61%), Gaps = 64/440 (14%)
Query: 22 PSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQD 81
P+ + + SLYVGDL VNE LY++F+ V V S+RVCRD R SLGYAYVNY D
Sbjct: 7 PNSFTSASLYVGDLLPEVNEGLLYEIFNAVGPVASIRVCRDAVTRRSLGYAYVNYHQAAD 66
Query: 82 AANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGT 141
A A +++NF I GKP RIM+S RDPS+R+SG GN+F+KNL IDNK L DTF+ FG
Sbjct: 67 AERALDSMNFTDIKGKPCRIMWSQRDPSVRRSGVGNIFVKNLHEGIDNKQLYDTFSLFGN 126
Query: 142 VLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
+LSCKV D G SKGYG+V +E EAA +AI L+GMLI+ K+V VG+F+RR R Q
Sbjct: 127 ILSCKVVCDRETGLSKGYGYVHYETNEAAASAIDKLDGMLIDGKEVQVGVFMRRDTRPDQ 186
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV-----------------MKDSD 243
V +TN+++ N+ D+ L+ F FG I SA V KD D
Sbjct: 187 EV---YTNLFIKNMPYEWDDKRLEAEFAEFGEIVSASVKMGKRKKFAKKGKKAEAKKDED 243
Query: 244 GK----------------------------------SRCFGFVNFQSPDAAAAAVEKLNG 269
K S FGFVNF + +AAAAAVE +N
Sbjct: 244 DKEDGAEDKPAEEEKPEEEEAKPAEEEAKPESTEPESLGFGFVNFATHEAAAAAVEAMND 303
Query: 270 -----TTNNDKV---WYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
T + D+V +VGRAQK++ER+A+LR+K+E E++ R K +G NLY+KNLDD++
Sbjct: 304 KVYKVTEDGDEVEKALFVGRAQKKSERQAELRSKYEAEKMERIAKFQGVNLYVKNLDDAV 363
Query: 322 NDEKLKELFSEFGTITSCKVMVD-QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
D+ L++ F GTITS K+M D + S+G GF FS PE+ATRA+NEM+GK++ KP+
Sbjct: 364 TDDMLRDEFGGMGTITSAKIMRDAKTNNSRGFGFVCFSTPEDATRAVNEMSGKIVAGKPI 423
Query: 381 YVAVAQRKEERKARLQAQFA 400
YV++AQR+E R+A+L+AQ A
Sbjct: 424 YVSLAQRREVRRAQLEAQHA 443
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 53/67 (79%)
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
+ALASA+P+ + M+GE+LYPL+ +P A K+TGMLLEMD +E+LHL+ESPEAL K+
Sbjct: 616 AALASATPEIQKNMIGERLYPLIHQTQPDLAGKITGMLLEMDNSELLHLLESPEALGAKI 675
Query: 611 AEAMAVL 617
EA+ VL
Sbjct: 676 QEALQVL 682
>gi|291401234|ref|XP_002716993.1| PREDICTED: poly(A) binding protein, cytoplasmic 4-like [Oryctolagus
cuniculus]
Length = 370
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 183/368 (49%), Positives = 250/368 (67%), Gaps = 4/368 (1%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
V + Y SLYVGDL +V E L+ FS+V V+S+R+CRD R SLGYAYVN+
Sbjct: 3 VAAKYRMASLYVGDLHSDVTEDLLFKKFSRVGPVLSIRICRDLVTRRSLGYAYVNFLQLA 62
Query: 81 DAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
DA A + +NF + GK IR+M+S RD +RKSG GNVFIKNLD SIDNK+L + F+AFG
Sbjct: 63 DAQKALDTMNFDVVKGKAIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKSLYECFSAFG 122
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
+LS KV D G SKGY FV F+++ AA AI+ +NG + D +V+VG F R++R +
Sbjct: 123 KILSSKVMSDDRG-SKGYAFVHFQSQSAADRAIEEMNGKFLKDCKVFVGRFKSRKDREAE 181
Query: 201 --NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
N + +FTNVY+ N + + DE L+++F +G I S VM +S GKSR FGFV+F S +
Sbjct: 182 LRNKASEFTNVYIKNFGDDMDDERLREVFSTYGRILSVKVMTNSCGKSRGFGFVSFDSHE 241
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
AA AVE++NG N + +VGRAQK+ ER+A+L+ FEQ + R +GA LY+KNLD
Sbjct: 242 AARKAVEEMNGKEVNGQPIFVGRAQKKVERQAELKQMFEQLKKERIRGCQGAKLYIKNLD 301
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
++I+DEKL++ FS FG+I+ KVM + G SKG G FS E+A RA+ MNG+++G K
Sbjct: 302 ENIDDEKLRKEFSSFGSISRVKVM-QEEGQSKGFGLICFSSSEDAARAMTVMNGRILGSK 360
Query: 379 PLYVAVAQ 386
PL +A+AQ
Sbjct: 361 PLNIALAQ 368
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 163/288 (56%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + L F+ G VLS ++ D +S GY +V F AQ A+
Sbjct: 11 SLYVGDLHSDVTEDLLFKKFSRVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDT 70
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N ++ K + + ++ +R ++ NV++ NL +++ ++ L + F FG I S
Sbjct: 71 MNFDVVKGKAIRL-MWSQRDAYLRK---SGIGNVFIKNLDKSIDNKSLYECFSAFGKILS 126
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ VM D G S+ + FV+FQS AA A+E++NG D +VGR + R +REA+LR K
Sbjct: 127 SKVMSDDRG-SKGYAFVHFQSQSAADRAIEEMNGKFLKDCKVFVGRFKSRKDREAELRNK 185
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ N+Y+KN D ++DE+L+E+FS +G I S KVM + G S+G GF
Sbjct: 186 ASE----------FTNVYIKNFGDDMDDERLREVFSTYGRILSVKVMTNSCGKSRGFGFV 235
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+F E A +A+ EMNGK + +P++V AQ+K ER+A L+ F Q++
Sbjct: 236 SFDSHEAARKAVEEMNGKEVNGQPIFVGRAQKKVERQAELKQMFEQLK 283
>gi|402870468|ref|XP_003899242.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Papio anubis]
Length = 496
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 183/369 (49%), Positives = 245/369 (66%), Gaps = 4/369 (1%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
+V + Y SLYVGDL +V E L+ FS V+S+R+CRDQ R SLGYAYVN+
Sbjct: 128 SVAAKYRMASLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQVTRRSLGYAYVNFLQL 187
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GK IR+M+S RD +R+SG GNVFIKNLD SIDNK L + F+ F
Sbjct: 188 TDAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSGF 247
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LS KV D G SKGY FV F+N+ AA AI+ +NG L+ +V+VG F R++R
Sbjct: 248 GKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGRLLKSCKVFVGRFKNRKDREA 306
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + + +FTN+Y+ N + DE LK +F +G S VM DS GKS+ FGFV+F S
Sbjct: 307 ELRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSRGKSKGFGFVSFDSH 366
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
+AA AVE++NG N ++ +VGRAQK+ ER+A+L+ FEQ + R +G LY+KNL
Sbjct: 367 EAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGYQGVKLYVKNL 426
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
DD+I+DEKL+ FS FG+I KVM Q G SKG GF FS E+AT+A+ EMNG+ +G
Sbjct: 427 DDTIDDEKLRNEFSSFGSIIRVKVM-QQEGQSKGFGFICFSSLEDATKAMIEMNGRFLGS 485
Query: 378 KPLYVAVAQ 386
KP+ +A+AQ
Sbjct: 486 KPISIALAQ 494
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 162/288 (56%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L F+A G VLS ++ D +S GY +V F AQ A+
Sbjct: 137 SLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQVTRRSLGYAYVNFLQLTDAQKALDT 196
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + ++ +R +++ NV++ NL +++ ++ L + F FG I S
Sbjct: 197 MNFDIIKGKSIRL-MWSQRDAYLRRS---GIGNVFIKNLDKSIDNKTLYEHFSGFGKILS 252
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ VM D G S+ + FV+FQ+ AA A+E++NG +VGR + R +REA+LR+K
Sbjct: 253 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGRLLKSCKVFVGRFKNRKDREAELRSK 311
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ N+Y+KN ++DE+LK++FS++G S KVM D G SKG GF
Sbjct: 312 ASE----------FTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSRGKSKGFGFV 361
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+F E A +A+ EMNG+ I + ++V AQ+K ER+A L+ F Q++
Sbjct: 362 SFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLK 409
>gi|351706751|gb|EHB09670.1| Polyadenylate-binding protein 4-like protein [Heterocephalus
glaber]
Length = 370
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 176/365 (48%), Positives = 247/365 (67%), Gaps = 4/365 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL E L+ FS V+S+R+CRD + R LGYAYVN+ DA
Sbjct: 7 YRLASLYVGDLHAEATEDLLFRKFSAAGPVLSIRICRDLATRQPLGYAYVNFLQLADAQR 66
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+PIR+M+S RD +R+SG GNVF+KNLD S+DNK L + F+ FG +LS
Sbjct: 67 ALDTMNFDVIKGRPIRLMWSQRDACLRRSGIGNVFVKNLDRSVDNKTLYEHFSGFGKILS 126
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NV 202
KV D G SKGY FV F+++ AA AI+ +NG +IND+ V+V F R++R + +
Sbjct: 127 SKVMSDDQG-SKGYAFVHFQSQSAANCAIEQMNGKVINDRPVFVAPFKPRKDREAELRSR 185
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N + + DE L+ +F +G S VM DS GKS+ FGFV+F+S +AA
Sbjct: 186 ASEFTNVYIKNFGDDMDDERLQGVFSRYGKTLSVKVMTDSSGKSKGFGFVSFESHEAAKR 245
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AVE++NG N ++ +VGRAQK+ ER+A+L+ FEQ + R + +G LY+KNLDD+++
Sbjct: 246 AVEEMNGKDMNGQLVFVGRAQKKVERQAELKHMFEQMKKERIRRCQGVKLYVKNLDDTVD 305
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DE+L++ FS FG+IT KVM + G+S+G G FS PEEA +AL EMNG+++G K L +
Sbjct: 306 DEQLRKEFSSFGSITRVKVM-KEEGYSRGFGLICFSSPEEAAKALTEMNGRVLGSKALSI 364
Query: 383 AVAQR 387
A+AQR
Sbjct: 365 ALAQR 369
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 160/291 (54%), Gaps = 22/291 (7%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L L F+A G VLS ++ D + Q GY +V F AQ A+
Sbjct: 11 SLYVGDLHAEATEDLLFRKFSAAGPVLSIRICRDLATRQPLGYAYVNFLQLADAQRALDT 70
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFT---NVYVNNLAETVTDEDLKKIFGHFGT 232
+N +I + + R +Q++ + + NV+V NL +V ++ L + F FG
Sbjct: 71 MNFDVIKGRPI-------RLMWSQRDACLRRSGIGNVFVKNLDRSVDNKTLYEHFSGFGK 123
Query: 233 ITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADL 292
I S+ VM D G S+ + FV+FQS AA A+E++NG ND+ +V + R +REA+L
Sbjct: 124 ILSSKVMSDDQG-SKGYAFVHFQSQSAANCAIEQMNGKVINDRPVFVAPFKPRKDREAEL 182
Query: 293 RAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGS 352
R+ R S + N+Y+KN D ++DE+L+ +FS +G S KVM D G SKG
Sbjct: 183 RS-----RASEF-----TNVYIKNFGDDMDDERLQGVFSRYGKTLSVKVMTDSSGKSKGF 232
Query: 353 GFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
GF +F E A RA+ EMNGK + + ++V AQ+K ER+A L+ F Q++
Sbjct: 233 GFVSFESHEAAKRAVEEMNGKDMNGQLVFVGRAQKKVERQAELKHMFEQMK 283
>gi|355687608|gb|EHH26192.1| hypothetical protein EGK_16094 [Macaca mulatta]
gi|355749570|gb|EHH53969.1| hypothetical protein EGM_14691 [Macaca fascicularis]
Length = 370
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 183/369 (49%), Positives = 244/369 (66%), Gaps = 4/369 (1%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
+V + Y SLYVGDL +V E L+ FS V+S+R+CRDQ R SLGYAYVN+
Sbjct: 2 SVAAKYRMASLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQVTRRSLGYAYVNFLQL 61
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GK IR+M+S RD +R+SG GNVFIKNLD SIDNK L + F+ F
Sbjct: 62 TDAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSGF 121
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LS KV D G SKGY FV F+N+ AA AI+ +NG L+ +V+VG F R++R
Sbjct: 122 GKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKSCKVFVGRFKNRKDREA 180
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + + +FTN+Y+ N + DE LK +F +G S VM DS GKS+ FGFV+F S
Sbjct: 181 ELRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSH 240
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
+AA AVE++NG N ++ +VGRAQK+ ER+A+L+ FEQ + R +G LY+KNL
Sbjct: 241 EAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGYQGVKLYVKNL 300
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
DD+I+DEKL+ FS FG+I KVM Q G SKG GF FS E+AT+A+ EMNG +G
Sbjct: 301 DDTIDDEKLRNEFSSFGSIIRVKVM-QQEGQSKGFGFICFSSLEDATKAMIEMNGCFLGS 359
Query: 378 KPLYVAVAQ 386
KP+ +A+AQ
Sbjct: 360 KPISIALAQ 368
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 161/288 (55%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L F+A G VLS ++ D +S GY +V F AQ A+
Sbjct: 11 SLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQVTRRSLGYAYVNFLQLTDAQKALDT 70
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K + + ++ +R ++ NV++ NL +++ ++ L + F FG I S
Sbjct: 71 MNFDIIKGKSIRL-MWSQRDAYLRR---SGIGNVFIKNLDKSIDNKTLYEHFSGFGKILS 126
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ VM D G S+ + FV+FQ+ AA A+E++NG +VGR + R +REA+LR+K
Sbjct: 127 SKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKSCKVFVGRFKNRKDREAELRSK 185
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ N+Y+KN ++DE+LK++FS++G S KVM D G SKG GF
Sbjct: 186 ASE----------FTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFV 235
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+F E A +A+ EMNG+ I + ++V AQ+K ER+A L+ F Q++
Sbjct: 236 SFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLK 283
>gi|452843390|gb|EME45325.1| hypothetical protein DOTSEDRAFT_71152 [Dothistroma septosporum
NZE10]
Length = 785
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 172/331 (51%), Positives = 234/331 (70%), Gaps = 4/331 (1%)
Query: 18 TAAVPSGYG--NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVN 75
T+A PS + SLYVG+L+ +V E+ L++LFS + QV S+RVCRD R SLGYAYVN
Sbjct: 44 TSAAPSNANPNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVN 103
Query: 76 YSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDT 135
Y++ D A E LN+ I GKP RIM+S RDP++RK+G GNVFIKNLD +IDNKAL DT
Sbjct: 104 YNSANDGERALEELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDGAIDNKALHDT 163
Query: 136 FAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ 195
FAAFG +LSCKVA D +G SKGYGFV +E EAA +AIK +NGML+N+K+V+VG + ++
Sbjct: 164 FAAFGNILSCKVAQDEHGNSKGYGFVHYETAEAANSAIKSVNGMLLNEKKVFVGHHIPKK 223
Query: 196 ERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVN 253
+R + + FTN+YV N+ TD++ + +F +G ITSA + D +GKSR FGFVN
Sbjct: 224 DRMSKFEEMKANFTNIYVKNIDPEATDDEFRALFEKYGDITSASLAHDQEGKSRGFGFVN 283
Query: 254 FQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLY 313
+ + A AVE+LN + + YVGRAQK+ ERE +LR ++E +R + K +G NLY
Sbjct: 284 YIRHEDANKAVEELNNSDFKGQALYVGRAQKKHEREEELRKQYEAQRQEKSAKYQGVNLY 343
Query: 314 LKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
+KNL D I+D++L+++F +G ITS KVM D
Sbjct: 344 VKNLADEIDDDELRKIFEPYGAITSAKVMRD 374
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 158/299 (52%), Gaps = 19/299 (6%)
Query: 108 PSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENE 166
PS ++++ LD S+ L + F++ G V S +V D+ +S GY +V + +
Sbjct: 48 PSNANPNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSA 107
Query: 167 EAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKI 226
+ A++ LN LI K + ++ +R ++ NV++ NL + ++ L
Sbjct: 108 NDGERALEELNYTLIKGKPCRI-MWSQRDPALRKTGQ---GNVFIKNLDGAIDNKALHDT 163
Query: 227 FGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRA 286
F FG I S V +D G S+ +GFV++++ +AA +A++ +NG N+K +VG +
Sbjct: 164 FAAFGNILSCKVAQDEHGNSKGYGFVHYETAEAANSAIKSVNGMLLNEKKVFVGHHIPK- 222
Query: 287 EREADLRAKFEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
++R+S++E++K N+Y+KN+D D++ + LF ++G ITS + D
Sbjct: 223 -----------KDRMSKFEEMKANFTNIYVKNIDPEATDDEFRALFEKYGDITSASLAHD 271
Query: 345 QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
Q G S+G GF + E+A +A+ E+N + LYV AQ+K ER+ L+ Q+ R
Sbjct: 272 QEGKSRGFGFVNYIRHEDANKAVEELNNSDFKGQALYVGRAQKKHEREEELRKQYEAQR 330
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 42/69 (60%)
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
+AL A P + +MLGE LYP + +P A K+TGMLLEMD E++ L AL+ KV
Sbjct: 681 NALGQAPPSQQKQMLGEALYPKIHAQQPELAGKITGMLLEMDNEELIGLTGDDNALREKV 740
Query: 611 AEAMAVLQE 619
EA+ V E
Sbjct: 741 QEALNVYDE 749
>gi|348582138|ref|XP_003476833.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Cavia porcellus]
Length = 482
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 175/371 (47%), Positives = 247/371 (66%), Gaps = 4/371 (1%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
+V + Y SLYVGDL + E L+ FS V+S+R+CRD + R LGYAYVN+ P
Sbjct: 114 SVAAKYRLASLYVGDLHADATEDLLFRKFSXAGPVLSIRICRDVATRRPLGYAYVNFLRP 173
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF + GKPIR+M+S RD +RKSG GNV IKNLD S+DNK L + F+ F
Sbjct: 174 ADAQKALDTMNFDAVEGKPIRLMWSQRDACLRKSGVGNVIIKNLDRSVDNKTLYEHFSGF 233
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LS KV D G SKGY FV F+++ AA AI+ +NG +I D+QV V F R++R
Sbjct: 234 GRILSSKVMSDDQG-SKGYAFVHFQSQSAADCAIQEMNGKVIRDRQVLVAPFRSRRDREA 292
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTNVYV N E + DE L+ +F +G S VM DS GKS+ FGFV+F S
Sbjct: 293 ELRTRTSEFTNVYVKNFGEDMDDERLQGVFSKYGRTLSVKVMTDSSGKSKGFGFVSFDSH 352
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
+AA AVE++NG N ++ +VGRAQK+ ER+A+L+ FE+ + + +G LY+KNL
Sbjct: 353 EAAKKAVEEMNGKDINGQLVFVGRAQKKEERQAELKQVFEELKRDGARRCQGVKLYIKNL 412
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
DD+++D++L+ FS FG+I+ KVM ++ G KG G FS PEEA +A+ +MNG+++G
Sbjct: 413 DDTVDDDRLRRAFSSFGSISRVKVM-EEEGQRKGFGLVCFSSPEEAAKAMTQMNGRVLGS 471
Query: 378 KPLYVAVAQRK 388
KPL +A+A+R+
Sbjct: 472 KPLNIALAKRQ 482
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 154/291 (52%), Gaps = 16/291 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L L F+ G VLS ++ D + + GY +V F AQ A+
Sbjct: 123 SLYVGDLHADATEDLLFRKFSXAGPVLSIRICRDVATRRPLGYAYVNFLRPADAQKALDT 182
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N + K + + R + V NV + NL +V ++ L + F FG I S
Sbjct: 183 MNFDAVEGKPIRLMWSQRDACLRKSGVG----NVIIKNLDRSVDNKTLYEHFSGFGRILS 238
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ VM D G S+ + FV+FQS AA A++++NG D+ V + R +REA+LR
Sbjct: 239 SKVMSDDQG-SKGYAFVHFQSQSAADCAIQEMNGKVIRDRQVLVAPFRSRRDREAELRT- 296
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
R S + N+Y+KN + ++DE+L+ +FS++G S KVM D G SKG GF
Sbjct: 297 ----RTSEF-----TNVYVKNFGEDMDDERLQGVFSKYGRTLSVKVMTDSSGKSKGFGFV 347
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPG 406
+F E A +A+ EMNGK I + ++V AQ+KEER+A L+ F +++ G
Sbjct: 348 SFDSHEAAKKAVEEMNGKDINGQLVFVGRAQKKEERQAELKQVFEELKRDG 398
>gi|408395605|gb|EKJ74783.1| hypothetical protein FPSE_05031 [Fusarium pseudograminearum CS3096]
Length = 749
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 171/318 (53%), Positives = 234/318 (73%), Gaps = 2/318 (0%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG+L+ +V E+ L++LFSQ+ V S+RVCRD R SLGYAYVNY+ D A
Sbjct: 58 SASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATPDGEKAL 117
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ I G+P RIM+S RDP++RK+G GNVFIKNLD +IDNKAL DTFAAFG +LSCK
Sbjct: 118 EELNYTIIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK 177
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSP 204
VA D G SKGYGFV +E +EAA AIK +NGML+N+K+VYVG + +++R + +
Sbjct: 178 VAQDETGASKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA 237
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTNVYV N+A VT++D +++F +G +TS+ + +D +GKSR FGFVNF + ++A AV
Sbjct: 238 NFTNVYVKNIAADVTEDDFRQLFEKYGDVTSSSLARDQEGKSRGFGFVNFTTHESAFKAV 297
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
++LN + + YVGRAQK+ ERE +LR +E R+ + K +G NLY+KNLDD ++D+
Sbjct: 298 DELNNKDFHGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVDDD 357
Query: 325 KLKELFSEFGTITSCKVM 342
KL+E+F +FG+ITS KVM
Sbjct: 358 KLREMFKDFGSITSAKVM 375
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 154/290 (53%), Gaps = 19/290 (6%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ LD S+ L + F+ G V S +V D+ +S GY +V + + A++
Sbjct: 60 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATPDGEKALEE 119
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN +I + + ++ +R ++ NV++ NL + ++ L F FG I S
Sbjct: 120 LNYTIIKGRPCRI-MWSQRDPALRKTGQ---GNVFIKNLDVAIDNKALHDTFAAFGNILS 175
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V +D G S+ +GFV++++ +AA+ A++ +NG N+K YVG + +R+
Sbjct: 176 CKVAQDETGASKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQ------ 229
Query: 296 FEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSG 353
S++E++K N+Y+KN+ + ++ ++LF ++G +TS + DQ G S+G G
Sbjct: 230 ------SKFEEMKANFTNVYVKNIAADVTEDDFRQLFEKYGDVTSSSLARDQEGKSRGFG 283
Query: 354 FAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
F F+ E A +A++E+N K + LYV AQ+K ER+ L+ + R
Sbjct: 284 FVNFTTHESAFKAVDELNNKDFHGQDLYVGRAQKKHEREEELRKSYEAAR 333
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 159/349 (45%), Gaps = 79/349 (22%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G GNV ++ +L+ ++ L+D F+ ++S +V +D++ +S GY +V+Y + A
Sbjct: 144 TGQGNV--FIKNLDVAIDNKALHDTFAAFGNILSCKVAQDETG-ASKGYGFVHYETDEAA 200
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIR--------KSGYGNVFIKNLDTSIDNKALCD 134
+ A + +N M +N K ++ H P K+ + NV++KN+ +
Sbjct: 201 SQAIKHVNGMLLNEK--KVYVGHHIPKKDRQSKFEEMKANFTNVYVKNIAADVTEDDFRQ 258
Query: 135 TFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRR 194
F +G V S +A D G+S+G+GFV F E+A A+ LN + + +YVG ++
Sbjct: 259 LFEKYGDVTSSSLARDQEGKSRGFGFVNFTTHESAFKAVDELNNKDFHGQDLYVGRAQKK 318
Query: 195 QERAQQ----------NVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMK-- 240
ER ++ + K+ N+Y+ NL + V D+ L+++F FG+ITSA VM+
Sbjct: 319 HEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVDDDKLREMFKDFGSITSAKVMRET 378
Query: 241 ----DSD------------------------------------------------GKSRC 248
D D GKS+
Sbjct: 379 PTEGDEDKKEKDESDKENQEEVKEEVKEESKEESKDETKEGEEDKKAEKKSDKKLGKSKG 438
Query: 249 FGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
FGFV F +PD A AV ++N N K YV AQ++ R++ L A +
Sbjct: 439 FGFVCFSNPDDATKAVAEMNQRMFNGKPLYVALAQRKDVRKSQLEASIQ 487
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 106/313 (33%), Positives = 139/313 (44%), Gaps = 57/313 (18%)
Query: 347 GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPG 406
G SKG GF FS P++AT+A+ EMN +M KPLYVA+AQRK+ RK++L+A Q R
Sbjct: 434 GKSKGFGFVCFSNPDDATKAVAEMNQRMFNGKPLYVALAQRKDVRKSQLEASI-QARNQL 492
Query: 407 GMSPLAS--GIPGYHHGAPRLGPQQLYYGQGT-PGLMPPQAAGYGFQQQV---------- 453
M A+ G+P + P +Y+ G PG MP G F Q
Sbjct: 493 RMQQAAAVAGMPQQYMQPP------VYFAPGQQPGYMPQGGRGVPFPQGAMGMPQGRPGQ 546
Query: 454 FP----GLRPGGPNYIMP--YHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYL 507
FP G R G P + P Y + Q PG Q PQFM L
Sbjct: 547 FPYPQQGGRGGVPQQMPPNMYGMPGQFPPG----------YGQPGTPQFMAAMQAQQAAL 596
Query: 508 DN--ARNGTDQSVVSMVPVPFEVSGMPATPVETPRPV-------------------PVPI 546
A G M +P MP P R +
Sbjct: 597 GGRGAPQGGRGGPQGMPGMPPMAGNMPGFPPNNNRQGGRGGPGRNGNGPQGGRGADAAGL 656
Query: 547 STLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEAL 606
S+L LASA P + ++LGE ++P ++ I A K+TGMLLEM+ E+++LIE AL
Sbjct: 657 SSLQQQLASAPPPQQKQILGELIFPKIQAINADLAGKITGMLLEMENPELVNLIEDESAL 716
Query: 607 KTKVAEAMAVLQE 619
K KV EA+AV E
Sbjct: 717 KAKVDEALAVYDE 729
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEEATRALN 368
A+LY+ LD S+ + L ELFS+ G + S +V D S G + ++ + +AL
Sbjct: 59 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATPDGEKALE 118
Query: 369 EMNGKMIGRKPLYVAVAQR 387
E+N +I +P + +QR
Sbjct: 119 ELNYTIIKGRPCRIMWSQR 137
>gi|449302325|gb|EMC98334.1| hypothetical protein BAUCODRAFT_86883 [Baudoinia compniacensis UAMH
10762]
Length = 802
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 172/334 (51%), Positives = 240/334 (71%), Gaps = 4/334 (1%)
Query: 15 SATTAAVPSGYGN-VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAY 73
+ T+AA + + N SLYVG+L+ +V E+ L++LFS V QV S+RVCRD R SLGYAY
Sbjct: 47 TPTSAAPSTAHPNSASLYVGELDPSVTEAMLFELFSSVGQVASIRVCRDAVTRRSLGYAY 106
Query: 74 VNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALC 133
VNY++ D A E LN+ I G+P RIM+S RDP++RK+G+GNVFIKNLD +IDNKAL
Sbjct: 107 VNYNSANDGERALEELNYTLIKGRPCRIMWSQRDPALRKTGHGNVFIKNLDGAIDNKALH 166
Query: 134 DTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVR 193
DTFAAFG +LSCKVA+D G SKGYGFV +E EAA AIK +NGML+N+K+V+VG +
Sbjct: 167 DTFAAFGNILSCKVAVDELGNSKGYGFVHYETAEAASQAIKSVNGMLLNEKKVFVGHHIP 226
Query: 194 RQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFG 250
+++R + + FTN+YV N+ VTD++ +++F +G ITSA + D++ GKSR FG
Sbjct: 227 KKDRMSKFEEMKANFTNIYVKNIETEVTDDEFRELFEKYGEITSASLAHDNETGKSRGFG 286
Query: 251 FVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGA 310
FVN+ + + A AV++LN + + + YVGRAQK+ ERE +LR ++E R + K +G
Sbjct: 287 FVNYINHEDAYKAVDELNDSDFHGQKLYVGRAQKKHEREEELRKQYEAARQEKSAKYQGV 346
Query: 311 NLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
NLY+KNL D ++DE+L+++F +G ITS KVM D
Sbjct: 347 NLYVKNLADEVDDEELRKIFEAYGAITSAKVMRD 380
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 160/300 (53%), Gaps = 20/300 (6%)
Query: 108 PSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENE 166
PS ++++ LD S+ L + F++ G V S +V D+ +S GY +V + +
Sbjct: 53 PSTAHPNSASLYVGELDPSVTEAMLFELFSSVGQVASIRVCRDAVTRRSLGYAYVNYNSA 112
Query: 167 EAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKI 226
+ A++ LN LI + + ++ +R ++ NV++ NL + ++ L
Sbjct: 113 NDGERALEELNYTLIKGRPCRI-MWSQRDPALRKT---GHGNVFIKNLDGAIDNKALHDT 168
Query: 227 FGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRA 286
F FG I S V D G S+ +GFV++++ +AA+ A++ +NG N+K +VG +
Sbjct: 169 FAAFGNILSCKVAVDELGNSKGYGFVHYETAEAASQAIKSVNGMLLNEKKVFVGHHIPK- 227
Query: 287 EREADLRAKFEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD 344
++R+S++E++K N+Y+KN++ + D++ +ELF ++G ITS + D
Sbjct: 228 -----------KDRMSKFEEMKANFTNIYVKNIETEVTDDEFRELFEKYGEITSASLAHD 276
Query: 345 -QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ G S+G GF + E+A +A++E+N + LYV AQ+K ER+ L+ Q+ R
Sbjct: 277 NETGKSRGFGFVNYINHEDAYKAVDELNDSDFHGQKLYVGRAQKKHEREEELRKQYEAAR 336
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 156/353 (44%), Gaps = 84/353 (23%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+G+GNV ++ +L+ ++ L+D F+ ++S +V D+ S GY +V+Y + A
Sbjct: 146 TGHGNV--FIKNLDGAIDNKALHDTFAAFGNILSCKVAVDELGNSK-GYGFVHYETAEAA 202
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIR--------KSGYGNVFIKNLDTSIDNKALCD 134
+ A +++N M +N K ++ H P K+ + N+++KN++T + + +
Sbjct: 203 SQAIKSVNGMLLNEK--KVFVGHHIPKKDRMSKFEEMKANFTNIYVKNIETEVTDDEFRE 260
Query: 135 TFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVR 193
F +G + S +A D+ G+S+G+GFV + N E A A+ LN + +++YVG +
Sbjct: 261 LFEKYGEITSASLAHDNETGKSRGFGFVNYINHEDAYKAVDELNDSDFHGQKLYVGRAQK 320
Query: 194 RQER----------AQQNVSPKF--TNVYVNNLA-------------------------- 215
+ ER A+Q S K+ N+YV NLA
Sbjct: 321 KHEREEELRKQYEAARQEKSAKYQGVNLYVKNLADEVDDEELRKIFEAYGAITSAKVMRD 380
Query: 216 ------------ETVTDEDLKKIFGH-------------------FGTITSAIVMKDSDG 244
E TD+ K++ G T+T K G
Sbjct: 381 VTPLDKAETDAKENKTDDKEKQVDGEPTEDKNGEEQEDMEELEKKMDTVTIG-GEKKVLG 439
Query: 245 KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
KS+ FGFV F +PD A AV +LN + K YV AQ++ R+ L A +
Sbjct: 440 KSKGFGFVCFSNPDEATKAVTELNQKMIHGKPLYVALAQRKEVRKTQLEASIQ 492
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%)
Query: 553 LASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAE 612
L +A P + ++LGE LYP + +P A K+TGMLLEMD E+L L +AL+ KV E
Sbjct: 697 LNAAPPSQQKQILGEALYPKIHAQQPELAGKITGMLLEMDNHELLGLTTDDDALRAKVDE 756
Query: 613 AMAVLQE 619
AM V +E
Sbjct: 757 AMNVYEE 763
>gi|332858528|ref|XP_003317002.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 1
[Pan troglodytes]
Length = 330
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 170/323 (52%), Positives = 229/323 (70%), Gaps = 3/323 (0%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A SGY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P
Sbjct: 3 ASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF + G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ F
Sbjct: 63 ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKVA D +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTN+YV NL V ++ L+++F FG + S VM+D+ G SRCFGFVNF+
Sbjct: 182 ELGARALEFTNIYVKNLPVDVDEQGLQELFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
+ A AV +NG + ++ Y GRAQKR ER+ +L+ +FEQ + R + +G NLY+KNL
Sbjct: 242 EEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNL 301
Query: 318 DDSINDEKLKELFSEFGTITSCK 340
DDSI+D+KL++ FS +G ITS K
Sbjct: 302 DDSIDDDKLRKEFSPYGVITSAK 324
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 160/294 (54%), Gaps = 18/294 (6%)
Query: 113 SGY--GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAA 169
SGY ++++ +L + L + F+ G +LS +V D + +S GY ++ F+ A
Sbjct: 6 SGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 170 QNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGH 229
+ A+ +N ++ + + + R + V N+++ NL +++ ++ L F
Sbjct: 66 ERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVG----NIFIKNLEDSIDNKALYDTFST 121
Query: 230 FGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAERE 289
FG I S V D G SR FGFV+F++ +AA A+ +NG ND+ +VG + R ERE
Sbjct: 122 FGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRRERE 180
Query: 290 ADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFS 349
A+L A+ L+ N+Y+KNL ++++ L+ELFS+FG + S KVM D G S
Sbjct: 181 AELGAR----------ALEFTNIYVKNLPVDVDEQGLQELFSQFGKMLSVKVMRDNSGHS 230
Query: 350 KGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ GF F EEA +A+ MNGK + + LY AQ++ ER+ L+ +F Q++
Sbjct: 231 RCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMK 284
>gi|426391822|ref|XP_004062265.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Gorilla
gorilla gorilla]
gi|164651982|gb|ABY64766.1| ePAB [Homo sapiens]
Length = 330
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 170/323 (52%), Positives = 228/323 (70%), Gaps = 3/323 (0%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A SGY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P
Sbjct: 3 ASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF + G+PIRIM+S RDP +RKSG GN+FIKNL+ SIDNKAL DTF+ F
Sbjct: 63 ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKVA D +G S+G+GFV FE EAAQ AI +NGML+ND++V+VG F R+ER
Sbjct: 123 GNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREA 181
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + +FTN+YV NL V ++ L+ +F FG + S VM+D+ G SRCFGFVNF+
Sbjct: 182 ELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKH 241
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
+ A AV +NG + ++ Y GRAQKR ER+ +L+ +FEQ + R + +G NLY+KNL
Sbjct: 242 EEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNL 301
Query: 318 DDSINDEKLKELFSEFGTITSCK 340
DDSI+D+KL++ FS +G ITS K
Sbjct: 302 DDSIDDDKLRKEFSPYGVITSAK 324
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 160/294 (54%), Gaps = 18/294 (6%)
Query: 113 SGY--GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAA 169
SGY ++++ +L + L + F+ G +LS +V D + +S GY ++ F+ A
Sbjct: 6 SGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 170 QNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGH 229
+ A+ +N ++ + + + R + V N+++ NL +++ ++ L F
Sbjct: 66 ERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVG----NIFIKNLEDSIDNKALYDTFST 121
Query: 230 FGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAERE 289
FG I S V D G SR FGFV+F++ +AA A+ +NG ND+ +VG + R ERE
Sbjct: 122 FGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRRERE 180
Query: 290 ADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFS 349
A+L A+ L+ N+Y+KNL ++++ L++LFS+FG + S KVM D G S
Sbjct: 181 AELGAR----------ALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS 230
Query: 350 KGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+ GF F EEA +A+ MNGK + + LY AQ++ ER+ L+ +F Q++
Sbjct: 231 RCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMK 284
>gi|10086463|gb|AAG12523.1|AC015446_4 Similar to Polyadenylate-Binding Proteins 2 and 5 [Arabidopsis
thaliana]
Length = 338
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 176/310 (56%), Positives = 222/310 (71%), Gaps = 5/310 (1%)
Query: 33 GDLEQNVNESQLYDLFSQVAQ-VVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
GDL+ +V E LY FS+ + SV+VC D++ SLGY YVN+++ A A E LN+
Sbjct: 18 GDLDSSVEEGDLYTKFSEFTHDISSVKVCCDRNTGLSLGYGYVNFNHSSQAKTAMEVLNY 77
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
+ GKP+RIM+S RDPS R SG GNVF+KNLD SIDNK LCD F+AFG VLSCKVA D+
Sbjct: 78 CKLKGKPMRIMFSERDPSNRMSGRGNVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDA 137
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYV 211
+G SKGYGFVQF ++ + A NG LI ++ ++V FV R Q + S FTNVYV
Sbjct: 138 SGVSKGYGFVQFYSDLSVYTACNFHNGTLIRNQHIHVCPFV---SRGQWDKSRVFTNVYV 194
Query: 212 NNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTT 271
NL ET TD DLK++FG FG ITSA+VMKD +GKSR FGFVNF+ +AA A+EK+NG
Sbjct: 195 KNLVETATDADLKRLFGEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVV 254
Query: 272 NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKL-KGANLYLKNLDDSINDEKLKELF 330
++K +VGRAQ++ R DL+AKFE E+I R K KG NLY+KNLDDS+++ KL+ELF
Sbjct: 255 VDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNTKLEELF 314
Query: 331 SEFGTITSCK 340
SEFGTITSCK
Sbjct: 315 SEFGTITSCK 324
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 141/280 (50%), Gaps = 21/280 (7%)
Query: 122 NLDTSIDNKALCDTFAAFG-TVLSCKVAIDSN-GQSKGYGFVQFENEEAAQNAIKMLNGM 179
+LD+S++ L F+ F + S KV D N G S GYG+V F + A+ A+++LN
Sbjct: 19 DLDSSVEEGDLYTKFSEFTHDISSVKVCCDRNTGLSLGYGYVNFNHSSQAKTAMEVLNYC 78
Query: 180 LINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVM 239
+ K + + ER N NV+V NL E++ ++ L +F FG + S V
Sbjct: 79 KLKGKPMRIMF----SERDPSNRMSGRGNVFVKNLDESIDNKQLCDMFSAFGKVLSCKVA 134
Query: 240 KDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQE 299
+D+ G S+ +GFV F S + A NGT ++ +V R + +++
Sbjct: 135 RDASGVSKGYGFVQFYSDLSVYTACNFHNGTLIRNQHIHVCPFVSRGQ--------WDKS 186
Query: 300 RISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSM 359
R+ N+Y+KNL ++ D LK LF EFG ITS VM D G S+ GF F
Sbjct: 187 RVF-------TNVYVKNLVETATDADLKRLFGEFGEITSAVVMKDGEGKSRRFGFVNFEK 239
Query: 360 PEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQF 399
E A A+ +MNG ++ K L+V AQRK R L+A+F
Sbjct: 240 AEAAVTAIEKMNGVVVDEKELHVGRAQRKTNRTEDLKAKF 279
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 126/234 (53%), Gaps = 29/234 (12%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GNV +V +L+++++ QL D+FS +V+S +V RD S S GY +V + +
Sbjct: 99 SGRGNV--FVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSK-GYGFVQFYSD--- 152
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYG------NVFIKNLDTSIDNKALCDTF 136
+ A NF NG IR + H P + + + NV++KNL + + L F
Sbjct: 153 LSVYTACNFH--NGTLIRNQHIHVCPFVSRGQWDKSRVFTNVYVKNLVETATDADLKRLF 210
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG + S V D G+S+ +GFV FE EAA AI+ +NG+++++K+++VG R+
Sbjct: 211 GEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVVVDEKELHVGRAQRKTN 270
Query: 197 RAQQNVSPKF--------------TNVYVNNLAETVTDEDLKKIFGHFGTITSA 236
R +++ KF N+YV NL ++V + L+++F FGTITS
Sbjct: 271 RT-EDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNTKLEELFSEFGTITSC 323
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 22/142 (15%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
++YV +L + ++ L LF + ++ S V +D +S + +VN+ + A A E
Sbjct: 191 NVYVKNLVETATDADLKRLFGEFGEITSAVVMKDGEGKSRR-FGFVNFEKAEAAVTAIEK 249
Query: 89 LNFMPINGKPIRIMYSHR-------------------DPSIRKSGYGNVFIKNLDTSIDN 129
+N + ++ K + + + R D RK N+++KNLD S+DN
Sbjct: 250 MNGVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGM--NLYVKNLDDSVDN 307
Query: 130 KALCDTFAAFGTVLSCKVAIDS 151
L + F+ FGT+ SCK A +S
Sbjct: 308 TKLEELFSEFGTITSCKYACNS 329
>gi|335775987|gb|AEH58755.1| polyadenylate-binding protein 1-like protein [Equus caballus]
Length = 510
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 221/529 (41%), Positives = 304/529 (57%), Gaps = 64/529 (12%)
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--N 201
+CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 1 ACKVVRDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGA 59
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
+ +FTNVY+ N E + DE LK +FG FG S VM D GKS+ FGFV+F+ + A
Sbjct: 60 RAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQ 119
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AV+++NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I
Sbjct: 120 KAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGI 179
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+DE+L++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLY
Sbjct: 180 DDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLY 238
Query: 382 VAVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHGAPR 424
VA+AQRKEER+A L Q+ Q +RA P G + IP + A
Sbjct: 239 VALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNRAAY 296
Query: 425 LGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PGQRT 480
P Q+ + +P A + FQ PG +RP P P+ R P +
Sbjct: 297 YPPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPRVMS 352
Query: 481 GVRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVPVPF 526
R + + Q P+ +R Q +Y RN Q V+M
Sbjct: 353 TQRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM----- 406
Query: 527 EVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTG 586
PA V+ P+ S LASA P ++ +MLGE+L+PL++ + P A K+TG
Sbjct: 407 ---QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITG 457
Query: 587 MLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
MLLE+D +E+LH++ESPE+L++KV EA+AVLQ + AA+ VN G
Sbjct: 458 MLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAVNSATG 506
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 146/266 (54%), Gaps = 23/266 (8%)
Query: 56 SVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRI----MYSHRDPSI- 110
+ +V RD++ S GY +V++ + A A E +N M +N + + + R+ +
Sbjct: 1 ACKVVRDEN--GSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 58
Query: 111 -RKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAA 169
R + NV+IKN +D++ L D F FG LS KV D +G+SKG+GFV FE E A
Sbjct: 59 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDA 118
Query: 170 QNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF-------------TNVYVNNLAE 216
Q A+ +NG +N KQ+YVG ++ ER Q + KF N+YV NL +
Sbjct: 119 QKAVDEMNGKELNGKQIYVGRAQKKVER-QTELKRKFEQMKQDRITRYQGVNLYVKNLDD 177
Query: 217 TVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKV 276
+ DE L+K F FGTITSA VM + G+S+ FGFV F SP+ A AV ++NG K
Sbjct: 178 GIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 236
Query: 277 WYVGRAQKRAEREADLRAKFEQERIS 302
YV AQ++ ER+A L ++ Q S
Sbjct: 237 LYVALAQRKEERQAHLTNQYMQRMAS 262
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 110/205 (53%), Gaps = 25/205 (12%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + +++++ +L DLF + +SV+V D+S +S G+ +V++ +DA A +
Sbjct: 65 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 123
Query: 88 ALNFMPINGKPIRIMYSHR-----------------DPSIRKSGYGNVFIKNLDTSIDNK 130
+N +NGK I + + + D R G N+++KNLD ID++
Sbjct: 124 EMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDE 182
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L F+ FGT+ S KV ++ G+SKG+GFV F + E A A+ +NG ++ K +YV L
Sbjct: 183 RLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 241
Query: 191 FVRRQERAQQNVSPKFTNVYVNNLA 215
R++ER TN Y+ +A
Sbjct: 242 AQRKEERQAH-----LTNQYMQRMA 261
>gi|405970795|gb|EKC35670.1| Polyadenylate-binding protein 1 [Crassostrea gigas]
Length = 462
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 178/324 (54%), Positives = 234/324 (72%), Gaps = 6/324 (1%)
Query: 16 ATTAAVPSG--YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAY 73
+TT P+G Y SLYVGDL +V E+ L++ FS V+ +RVCRD R SLGYAY
Sbjct: 2 STTTMNPAGPSYPMASLYVGDLHPDVTEAMLFEKFSTAGPVLPIRVCRDMITRRSLGYAY 61
Query: 74 VNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALC 133
VN+ P DA A + +NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL
Sbjct: 62 VNFQQPADAERALDTMNFDTIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALY 121
Query: 134 DTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVR 193
DTF+AFG +LSCK+ D +G S+GYGFV FE EEAA+ AI+ +NGML+N K+V+VG F+
Sbjct: 122 DTFSAFGNILSCKIVCDEHG-SRGYGFVHFETEEAARIAIEKVNGMLLNGKKVFVGRFMS 180
Query: 194 RQERAQ--QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFG 250
R+ER + + KF NVYV N +E + DE L+ +F +G I SA VM D GK + FG
Sbjct: 181 RRERLEVLGDKMRKFNNVYVKNFSEEINDETLRDMFEPYGKIISAKVMTDDGSGKGKGFG 240
Query: 251 FVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGA 310
FV+F+ P+AA AVE LNG N+ K+ YVGRAQK+ ER+A+L+ KFE+ R+ R + +G
Sbjct: 241 FVSFEDPEAAEKAVEALNGNDNSGKILYVGRAQKKIERQAELKEKFERIRMERINRYQGV 300
Query: 311 NLYLKNLDDSINDEKLKELFSEFG 334
NLY+KNLDD+I+DE+L++ F++FG
Sbjct: 301 NLYVKNLDDNIDDERLRKEFAQFG 324
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 145/289 (50%), Gaps = 17/289 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L + F+ G VL +V D +S GY +V F+ A+ A+
Sbjct: 17 SLYVGDLHPDVTEAMLFEKFSTAGPVLPIRVCRDMITRRSLGYAYVNFQQPADAERALDT 76
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N I + + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 77 MNFDTIKGRPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNILS 132
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
++ D G SR +GFV+F++ +AA A+EK+NG N K +VGR R ER L K
Sbjct: 133 CKIVCDEHG-SRGYGFVHFETEEAARIAIEKVNGMLLNGKKVFVGRFMSRRERLEVLGDK 191
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGF- 354
K N+Y+KN + INDE L+++F +G I S KVM D
Sbjct: 192 MR----------KFNNVYVKNFSEEINDETLRDMFEPYGKIISAKVMTDDGSGKGKGFGF 241
Query: 355 AAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+F PE A +A+ +NG K LYV AQ+K ER+A L+ +F +IR
Sbjct: 242 VSFEDPEAAEKAVEALNGNDNSGKILYVGRAQKKIERQAELKEKFERIR 290
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 37/47 (78%)
Query: 577 EPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAAR 623
+P A K+TGMLLE+D +E+LH++ES E+L+ KV EA+AVLQ A+
Sbjct: 406 QPDLAGKITGMLLEIDNSELLHMLESQESLEAKVKEAVAVLQAHQAK 452
>gi|294940190|ref|XP_002782709.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239894589|gb|EER14504.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 716
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 186/426 (43%), Positives = 261/426 (61%), Gaps = 56/426 (13%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLY GDL +V E+ LY++F+ + V S+RVCRD R SLGYAY+N+ N DA A +
Sbjct: 49 SLYAGDLAPDVTEAVLYEVFNAIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERALDT 108
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LN+ PI G+P R+M+SHRDP++R+SG GNV++KNLD +IDNKAL DTF+ FG +LSCKVA
Sbjct: 109 LNYSPIKGRPCRLMWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFGNILSCKVA 168
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK-FT 207
+ +G+S+G+GFV FE++E+A+ AI LNGM I +K VYV F + ER + +PK FT
Sbjct: 169 LTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVAPFKKTAER--NDGTPKNFT 226
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NVY+ ++ + +E +K+ FG FG ITS V +D K R F FVN+ + A AAVE++
Sbjct: 227 NVYIKHIPASWNEEKIKEEFGAFGEITSLAV--QTDPKGRRFAFVNYAEFEQARAAVEEM 284
Query: 268 NGTTNNDKV-----------------------------------------------WYVG 280
+G ++ YV
Sbjct: 285 DGKDVRNEEEKAADRAQREREREERKAAREAAKAEGREDGDDVESDDDDEEPETSHLYVA 344
Query: 281 RAQKRAEREADLRAKFEQER-ISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSC 339
RAQ +AER A L+ +F R + G NLY+KNL + ++D +LK++F FGT+TS
Sbjct: 345 RAQPKAERAAVLKEQFSASRGAQGGGRFGGVNLYVKNLGEDVDDAELKKMFEPFGTVTSV 404
Query: 340 KVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQF 399
KVMVD G S+G GF FS EEAT+A+ +M+ K+IG KPLYV + +++E+R RLQ ++
Sbjct: 405 KVMVDDKGVSRGFGFVCFSTHEEATKAVTDMHLKLIGGKPLYVGMHEKREQRLERLQQRY 464
Query: 400 AQIRAP 405
RAP
Sbjct: 465 ---RAP 467
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 135/280 (48%), Gaps = 31/280 (11%)
Query: 115 YGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAI 173
+ +++ +L + L + F A G V S +V DS +S GY ++ F N A+ A+
Sbjct: 47 FASLYAGDLAPDVTEAVLYEVFNAIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERAL 106
Query: 174 KMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTI 233
LN I + + ++ R +++ + NVYV NL + ++ L F FG I
Sbjct: 107 DTLNYSPIKGRPCRL-MWSHRDPALRRSGA---GNVYVKNLDRNIDNKALYDTFSLFGNI 162
Query: 234 TSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLR 293
S V DGKSR FGFV+F+S ++A AA+ KLNG +K YV +K AER
Sbjct: 163 LSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVAPFKKTAERNDGTP 222
Query: 294 AKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSG 353
F N+Y+K++ S N+EK+KE F FG ITS V D G +
Sbjct: 223 KNF-------------TNVYIKHIPASWNEEKIKEEFGAFGEITSLAVQTDPKG--RRFA 267
Query: 354 FAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
F ++ E+A A+ EM+GK + R EE KA
Sbjct: 268 FVNYAEFEQARAAVEEMDGKDV-----------RNEEEKA 296
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 25/194 (12%)
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAA 261
S +F ++Y +LA VT+ L ++F G + S V +DS KS + ++NF + A
Sbjct: 44 SQQFASLYAGDLAPDVTEAVLYEVFNAIGPVASIRVCRDSVTRKSLGYAYINFHNVADAE 103
Query: 262 AAVEKLNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
A++ LN + + +W + R+ LR + N+Y+KNL
Sbjct: 104 RALDTLNYSPIKGRPCRLMW--------SHRDPALR------------RSGAGNVYVKNL 143
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
D +I+++ L + FS FG I SCKV + G S+G GF F E A A+ ++NG IG
Sbjct: 144 DRNIDNKALYDTFSLFGNILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGE 203
Query: 378 KPLYVAVAQRKEER 391
K +YVA ++ ER
Sbjct: 204 KTVYVAPFKKTAER 217
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 41/56 (73%)
Query: 563 RMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
+MLGEQLY ++ I+P A K+TGM+LEMD +E+L L+ES L+ KV EA+ VL
Sbjct: 659 QMLGEQLYTQIQRIQPQLAGKITGMMLEMDNSELLILLESESQLRAKVDEALMVLH 714
>gi|294889687|ref|XP_002772922.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239877502|gb|EER04738.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 715
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 186/426 (43%), Positives = 261/426 (61%), Gaps = 56/426 (13%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLY GDL +V E+ LY++F+ + V S+RVCRD R SLGYAY+N+ N DA A +
Sbjct: 49 SLYAGDLAPDVTEAVLYEVFNAIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERALDT 108
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LN+ PI G+P R+M+SHRDP++R+SG GNV++KNLD +IDNKAL DTF+ FG +LSCKVA
Sbjct: 109 LNYSPIKGRPCRLMWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFGNILSCKVA 168
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK-FT 207
+ +G+S+G+GFV FE++E+A+ AI LNGM I +K VYV F + ER + +PK FT
Sbjct: 169 LTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVAPFKKTAER--NDGTPKNFT 226
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NVY+ ++ + +E +K+ FG FG ITS V +D K R F FVN+ + A AAVE++
Sbjct: 227 NVYIKHIPASWNEEKIKEEFGAFGEITSLAV--QTDPKGRRFAFVNYAEFEQARAAVEEM 284
Query: 268 NGTTNNDKV-----------------------------------------------WYVG 280
+G ++ YV
Sbjct: 285 DGKDVRNEEEKAADRAQREREREERKAAREAAKAEGREEGDDVESDDDDEEPETSHLYVA 344
Query: 281 RAQKRAEREADLRAKFEQER-ISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSC 339
RAQ +AER A L+ +F R + G NLY+KNL + ++D +LK++F FGT+TS
Sbjct: 345 RAQPKAERAAVLKEQFSASRGAQGGGRFGGVNLYVKNLGEDVDDAELKKMFEPFGTVTSV 404
Query: 340 KVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQF 399
KVMVD G S+G GF FS EEAT+A+ +M+ K+IG KPLYV + +++E+R RLQ ++
Sbjct: 405 KVMVDDKGVSRGFGFVCFSTHEEATKAVTDMHLKLIGGKPLYVGMHEKREQRLERLQQRY 464
Query: 400 AQIRAP 405
RAP
Sbjct: 465 ---RAP 467
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 135/280 (48%), Gaps = 31/280 (11%)
Query: 115 YGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAI 173
+ +++ +L + L + F A G V S +V DS +S GY ++ F N A+ A+
Sbjct: 47 FASLYAGDLAPDVTEAVLYEVFNAIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERAL 106
Query: 174 KMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTI 233
LN I + + ++ R +++ + NVYV NL + ++ L F FG I
Sbjct: 107 DTLNYSPIKGRPCRL-MWSHRDPALRRSGA---GNVYVKNLDRNIDNKALYDTFSLFGNI 162
Query: 234 TSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLR 293
S V DGKSR FGFV+F+S ++A AA+ KLNG +K YV +K AER
Sbjct: 163 LSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVAPFKKTAERNDGTP 222
Query: 294 AKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSG 353
F N+Y+K++ S N+EK+KE F FG ITS V D G +
Sbjct: 223 KNF-------------TNVYIKHIPASWNEEKIKEEFGAFGEITSLAVQTDPKG--RRFA 267
Query: 354 FAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
F ++ E+A A+ EM+GK + R EE KA
Sbjct: 268 FVNYAEFEQARAAVEEMDGKDV-----------RNEEEKA 296
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 25/194 (12%)
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAA 261
S +F ++Y +LA VT+ L ++F G + S V +DS KS + ++NF + A
Sbjct: 44 SQQFASLYAGDLAPDVTEAVLYEVFNAIGPVASIRVCRDSVTRKSLGYAYINFHNVADAE 103
Query: 262 AAVEKLNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
A++ LN + + +W + R+ LR + N+Y+KNL
Sbjct: 104 RALDTLNYSPIKGRPCRLMW--------SHRDPALR------------RSGAGNVYVKNL 143
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
D +I+++ L + FS FG I SCKV + G S+G GF F E A A+ ++NG IG
Sbjct: 144 DRNIDNKALYDTFSLFGNILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGE 203
Query: 378 KPLYVAVAQRKEER 391
K +YVA ++ ER
Sbjct: 204 KTVYVAPFKKTAER 217
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 41/56 (73%)
Query: 563 RMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
+MLGEQLY ++ I+P A K+TGM+LEMD +E+L L+ES L+ KV EA+ VL
Sbjct: 658 QMLGEQLYTQIQRIQPQLAGKITGMMLEMDNSELLILLESESQLRAKVDEALMVLH 713
>gi|7689377|gb|AAF67755.1|AF255335_1 poly(A)-binding protein [Spisula solidissima]
Length = 286
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 176/291 (60%), Positives = 220/291 (75%), Gaps = 10/291 (3%)
Query: 102 MYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFV 161
M+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AFG +LSCK+ D +G S+GYGFV
Sbjct: 1 MWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKIVSDEHG-SRGYGFV 59
Query: 162 QFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVT 219
FE EEAA+NAI+ +NGML+N K+V+VG F+ R+ER +Q + KF NVY+ N +E +
Sbjct: 60 HFETEEAARNAIEKVNGMLLNGKKVFVGRFMNRRERLEQMGDKMKKFNNVYIKNFSEEID 119
Query: 220 DEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYV 279
DE LK F FG I SA VM DGK R FGFV+++ P+AA AV ++N T +K YV
Sbjct: 120 DEKLKIWFETFGKIISAKVMTGYDGKGRGFGFVSYEEPEAAEKAVTEMNNKTFEEKTLYV 179
Query: 280 GRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTI 336
GRAQKRAER+A+L+ KF+ QER++RY+ G NLY+KNLDDSI+DEKL++ FS FGTI
Sbjct: 180 GRAQKRAERQAELKDKFDRLKQERMNRYQ---GVNLYVKNLDDSIDDEKLRKEFSAFGTI 236
Query: 337 TSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
TS KVM + G SKG GF FS PEEAT+A+ EMNG++I KPLYVA+AQR
Sbjct: 237 TSAKVMT-EGGRSKGFGFVCFSSPEEATKAVTEMNGRIIVAKPLYVALAQR 286
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 156/282 (55%), Gaps = 25/282 (8%)
Query: 22 PSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQD 81
SG GNV ++ +L+++++ LYD FS ++S ++ D+ S GY +V++ +
Sbjct: 11 KSGVGNV--FIKNLDKSIDNKALYDTFSAFGNILSCKIVSDE--HGSRGYGFVHFETEEA 66
Query: 82 AANAKEALNFMPINGKPIRI-MYSHRDPSIRKSG-----YGNVFIKNLDTSIDNKALCDT 135
A NA E +N M +NGK + + + +R + + G + NV+IKN ID++ L
Sbjct: 67 ARNAIEKVNGMLLNGKKVFVGRFMNRRERLEQMGDKMKKFNNVYIKNFSEEIDDEKLKIW 126
Query: 136 FAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ 195
F FG ++S KV +G+ +G+GFV +E EAA+ A+ +N +K +YVG +R
Sbjct: 127 FETFGKIISAKVMTGYDGKGRGFGFVSYEEPEAAEKAVTEMNNKTFEEKTLYVGRAQKRA 186
Query: 196 ERAQQNVSPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
ER Q + KF N+YV NL +++ DE L+K F FGTITSA VM +
Sbjct: 187 ER-QAELKDKFDRLKQERMNRYQGVNLYVKNLDDSIDDEKLRKEFSAFGTITSAKVMTEG 245
Query: 243 DGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQK 284
G+S+ FGFV F SP+ A AV ++NG K YV AQ+
Sbjct: 246 -GRSKGFGFVCFSSPEEATKAVTEMNGRIIVAKPLYVALAQR 286
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 112/196 (57%), Gaps = 11/196 (5%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NV++ NL +++ ++ L F FG I S ++ D G SR +GFV+F++ +AA A+EK+
Sbjct: 16 NVFIKNLDKSIDNKALYDTFSAFGNILSCKIVSDEHG-SRGYGFVHFETEEAARNAIEKV 74
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG N K +VGR R ER + K + K N+Y+KN + I+DEKLK
Sbjct: 75 NGMLLNGKKVFVGRFMNRRERLEQMGDKMK----------KFNNVYIKNFSEEIDDEKLK 124
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
F FG I S KVM G +G GF ++ PE A +A+ EMN K K LYV AQ+
Sbjct: 125 IWFETFGKIISAKVMTGYDGKGRGFGFVSYEEPEAAEKAVTEMNNKTFEEKTLYVGRAQK 184
Query: 388 KEERKARLQAQFAQIR 403
+ ER+A L+ +F +++
Sbjct: 185 RAERQAELKDKFDRLK 200
>gi|359322009|ref|XP_850457.3| PREDICTED: uncharacterized protein LOC483825 [Canis lupus
familiaris]
Length = 1009
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/371 (45%), Positives = 244/371 (65%), Gaps = 4/371 (1%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
V + Y SLYVGDL+ V E L+ FS V+S+R+CRD R SLGYAYVN+
Sbjct: 141 VAAKYRQASLYVGDLDAEVTEDALFRKFSAAGPVLSIRICRDLLTRRSLGYAYVNFLRLA 200
Query: 81 DAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
DA A + +NF + G+P+R+M+S RD +RKSG GNVFIKNLD S+D+KAL + F+AFG
Sbjct: 201 DAQRALDTMNFDVLRGRPLRLMWSQRDAHLRKSGVGNVFIKNLDRSVDDKALFERFSAFG 260
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
+LS KV D G S+GY FV F+ + AA AI+ +NG + +++VG F RQ R +
Sbjct: 261 KILSSKVVSDERG-SRGYAFVHFQEQSAADRAIEHMNGAQLRGCRLFVGRFQSRQAREAE 319
Query: 201 --NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
+ + +FTN+Y+ N + D L+ +F +G S VM D+ G+SR FGFV+F+S +
Sbjct: 320 LRSRAGEFTNLYIKNFGGRMDDARLRAVFSEYGKTLSVKVMTDASGRSRGFGFVSFESHE 379
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
AA AVE LNG + + +VGRAQ++AER+A+LR FEQ + + +GA LY+KNLD
Sbjct: 380 AARRAVEALNGRQVDGQPLFVGRAQRKAERQAELRRAFEQRQQDGLRRAQGAKLYVKNLD 439
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
D++++++L+ FS FG ++ K+M ++ G SKG G FS +EA RAL EMNG+++G K
Sbjct: 440 DAVDEDRLRREFSGFGAVSRVKIMREE-GRSKGFGLICFSSADEAARALAEMNGRVLGSK 498
Query: 379 PLYVAVAQRKE 389
PL +A+AQ +
Sbjct: 499 PLSIALAQSRR 509
>gi|432118841|gb|ELK38215.1| Polyadenylate-binding protein 5 [Myotis davidii]
Length = 382
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 176/358 (49%), Positives = 237/358 (66%), Gaps = 5/358 (1%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL+ +V E LY F + R+CRD RS LGY YVN+ P DA A +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPETRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIKNLD SIDN+AL F+AFG +LSCKV D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS---PKFTN 208
NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + + FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTN 200
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V N + V DE LK+IF +G S V++D+ GKS+ FGFV +++ +AA AV L+
Sbjct: 201 VFVKNFGDEVDDEKLKEIFSEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G + + K YVGRAQK+ ER A+LR +FE+ ++ + G +Y+KNLD++I+DEKL+E
Sbjct: 261 GKSIDGKALYVGRAQKKIERLAELRRRFERLKVKEKSRPPGVPVYIKNLDETIDDEKLRE 320
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
FS FG+I+ KVMV + G KG G FS EEAT+A+ EMNG+M+G KPL+V + Q
Sbjct: 321 EFSSFGSISRAKVMV-EVGQGKGFGVVCFSSFEEATKAVGEMNGRMVGSKPLHVTLGQ 377
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 160/300 (53%), Gaps = 17/300 (5%)
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKMLNG 178
+ +LD + L F G + ++ D +S GYG+V F A+ A+ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPETRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
LIN K + ++ + +R +++ N+++ NL +++ + L +F FG I S V
Sbjct: 82 DLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ D +G S+ + +V+F S AA A+ +NG N++ YVGR + ER A++R +
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 193
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
++ N+++KN D ++DEKLKE+FSE+G S KV+ D G SKG GF +
Sbjct: 194 ------DRATFTNVFVKNFGDEVDDEKLKEIFSEYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGY 418
E A +A+ +++GK I K LYV AQ+K ER A L+ +F +++ P G+P Y
Sbjct: 248 THEAAQKAVLDLHGKSIDGKALYVGRAQKKIERLAELRRRFERLKVKEKSRP--PGVPVY 305
>gi|226358689|gb|ACO51197.1| poly A binding protein, cytoplasmic 1 a [Hypophthalmichthys
nobilis]
Length = 290
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 164/292 (56%), Positives = 213/292 (72%), Gaps = 4/292 (1%)
Query: 91 FMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID 150
F I G+P+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LSCKV D
Sbjct: 1 FFVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD 60
Query: 151 SNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFTN 208
NG SKGYGFV FE EAA+ AI+ +NGML+ND++V+VG F R+ER + + +FTN
Sbjct: 61 ENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKERGAEMGARAKEFTN 119
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
VY+ N E + DE LK+IF +G S VM D GKS+ FGFV+F+ + A AV+++N
Sbjct: 120 VYIKNFGEDMDDEKLKEIFSKYGPALSIRVMTDESGKSKGFGFVSFERHEDAQRAVDEMN 179
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD ++DE+L++
Sbjct: 180 GKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRK 239
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
FS FGTITS KVM+ + G SKG GF FS PEEAT+A+ EMNG+++ KPL
Sbjct: 240 EFSPFGTITSAKVMM-EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 290
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 126/196 (64%), Gaps = 11/196 (5%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
N+++ NL +++ ++ L F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+
Sbjct: 27 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKM 85
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG ND+ +VGR + R ER A++ A+ ++ N+Y+KN + ++DEKLK
Sbjct: 86 NGMLLNDRKVFVGRFKSRKERGAEMGARAKE----------FTNVYIKNFGEDMDDEKLK 135
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
E+FS++G S +VM D+ G SKG GF +F E+A RA++EMNGK + K +YV AQ+
Sbjct: 136 EIFSKYGPALSIRVMTDESGKSKGFGFVSFERHEDAQRAVDEMNGKEMNGKQVYVGRAQK 195
Query: 388 KEERKARLQAQFAQIR 403
K ER+ L+ +F Q++
Sbjct: 196 KGERQTELKRKFEQMK 211
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 96/174 (55%), Gaps = 20/174 (11%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + +++++ +L ++FS+ +S+RV D+S +S G+ +V++ +DA A +
Sbjct: 118 TNVYIKNFGEDMDDEKLKEIFSKYGPALSIRVMTDESGKSK-GFGFVSFERHEDAQRAVD 176
Query: 88 ALNFMPINGKPIRIMYSHR-----------------DPSIRKSGYGNVFIKNLDTSIDNK 130
+N +NGK + + + + D R G N+++KNLD +D++
Sbjct: 177 EMNGKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQDRMTRYQGV-NLYVKNLDDGLDDE 235
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDK 184
L F+ FGT+ S KV ++ G+SKG+GFV F + E A A+ +NG ++ K
Sbjct: 236 RLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 288
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LYV +L+ +++ +L FS + S +V + + S G+ +V +S+P++A
Sbjct: 218 YQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEGGR--SKGFGFVCFSSPEEATK 275
Query: 85 AKEALNFMPINGKPI 99
A +N + KP+
Sbjct: 276 AVTEMNGRIVATKPL 290
>gi|115468728|ref|NP_001057963.1| Os06g0589700 [Oryza sativa Japonica Group]
gi|113596003|dbj|BAF19877.1| Os06g0589700 [Oryza sativa Japonica Group]
Length = 399
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 186/389 (47%), Positives = 249/389 (64%), Gaps = 29/389 (7%)
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
M+D++G SRCFGFVNF+ + A AV+ LNG + D V YV RAQK++ER+A+L+AKFE
Sbjct: 1 MRDANGLSRCFGFVNFEKSECARNAVKNLNGKSIGDMVLYVARAQKKSERQAELKAKFEH 60
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
++ ++EKL+ NLYLKNLDD INDE L++LF FG + SCKVM+D HG SKG GF +F+
Sbjct: 61 DKNQKFEKLQTVNLYLKNLDDDINDEHLRKLFECFGEVASCKVMLDSHGRSKGCGFVSFA 120
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGY 418
E+A A+ +MNGKM+G+KPLYVAVAQRKEERKA L A FA++RA M+P
Sbjct: 121 TVEDANNAILKMNGKMVGKKPLYVAVAQRKEERKAFLAAHFARVRALATMAPTL------ 174
Query: 419 HHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQ 478
P + P Q +G G P L PP Q F PN +MPY++QRQ PGQ
Sbjct: 175 ---GPNIAPHQFNFGHGVPALFPPPPPAGFGFQPNFV------PNMMMPYNMQRQ--PGQ 223
Query: 479 RTGVRRSGNTHQMQQPQ--FMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPV 536
R+G G + P F +N+NQG R++ N RNG +M+ S P P+
Sbjct: 224 RSGPPHGGMPRHLHNPHQMFHQNANQGFRHMPNRRNGVANP--AMLHQHHRFSS-PMQPM 280
Query: 537 E--TPRPVPV-----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
+ VPV P + L ++LASA+P+ + +LG+ L+PLVE + A KVTGMLL
Sbjct: 281 QQAVKHVVPVGELQAPSNNLQTSLASANPEQQREILGDMLFPLVEQLVNEKAYKVTGMLL 340
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
E+D+TEVL+L+ESP+ L+ KVAEAM VL+
Sbjct: 341 ELDKTEVLNLVESPDTLRDKVAEAMKVLE 369
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 92/164 (56%), Gaps = 14/164 (8%)
Query: 150 DSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF--- 206
D+NG S+ +GFV FE E A+NA+K LNG I D +YV ++ ER Q + KF
Sbjct: 3 DANGLSRCFGFVNFEKSECARNAVKNLNGKSIGDMVLYVARAQKKSER-QAELKAKFEHD 61
Query: 207 ----------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQS 256
N+Y+ NL + + DE L+K+F FG + S VM DS G+S+ GFV+F +
Sbjct: 62 KNQKFEKLQTVNLYLKNLDDDINDEHLRKLFECFGEVASCKVMLDSHGRSKGCGFVSFAT 121
Query: 257 PDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQER 300
+ A A+ K+NG K YV AQ++ ER+A L A F + R
Sbjct: 122 VEDANNAILKMNGKMVGKKPLYVAVAQRKEERKAFLAAHFARVR 165
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 75/146 (51%), Gaps = 16/146 (10%)
Query: 68 SLGYAYVNYSNPQDAANAKEALNFMPING---------------KPIRIMYSH-RDPSIR 111
S + +VN+ + A NA + LN I ++ + H ++
Sbjct: 8 SRCFGFVNFEKSECARNAVKNLNGKSIGDMVLYVARAQKKSERQAELKAKFEHDKNQKFE 67
Query: 112 KSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQN 171
K N+++KNLD I+++ L F FG V SCKV +DS+G+SKG GFV F E A N
Sbjct: 68 KLQTVNLYLKNLDDDINDEHLRKLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANN 127
Query: 172 AIKMLNGMLINDKQVYVGLFVRRQER 197
AI +NG ++ K +YV + R++ER
Sbjct: 128 AILKMNGKMVGKKPLYVAVAQRKEER 153
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
V+LY+ +L+ ++N+ L LF +V S +V D RS G +V+++ +DA NA
Sbjct: 72 VNLYLKNLDDDINDEHLRKLFECFGEVASCKVMLDSHGRSK-GCGFVSFATVEDANNAIL 130
Query: 88 ALNFMPINGKPIRIMYSHR 106
+N + KP+ + + R
Sbjct: 131 KMNGKMVGKKPLYVAVAQR 149
>gi|160333518|ref|NP_001103836.1| poly A binding protein, cytoplasmic 5 [Rattus norvegicus]
gi|149055477|gb|EDM07061.1| rCG38154 [Rattus norvegicus]
Length = 382
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 174/358 (48%), Positives = 238/358 (66%), Gaps = 5/358 (1%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL+ +V E LY F + R+CRD RS LGY YVN+ P DA A +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIKNLD SIDN+AL F+AFG +LSCKV D
Sbjct: 82 DLINGKPFRLMWSQPDDHLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS---PKFTN 208
NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + + FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTN 200
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V N + + DE LKK+F +G S V++D+ GKS+ FGFV +++ +AA AV +L+
Sbjct: 201 VFVKNFGDDIDDEKLKKLFSEYGPTESVKVIRDATGKSKGFGFVRYETHEAAQKAVLELH 260
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G + + KV VGRAQK+ ER A+LR +FE+ ++ + G +Y+KNLD++INDEKLKE
Sbjct: 261 GKSIDGKVLCVGRAQKKIERLAELRRRFERLKLKDKTRPPGVPIYIKNLDETINDEKLKE 320
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
FS FG+I+ KVM++ G KG G FS EEA++A+NEMNG+++G K L+V + Q
Sbjct: 321 EFSLFGSISRAKVMMEV-GQGKGFGVVCFSSFEEASKAVNEMNGRVVGSKTLHVTLGQ 377
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 153/300 (51%), Gaps = 17/300 (5%)
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKMLNG 178
+ +LD + L F G + ++ D +S GYG+V F A+ A+ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
LIN K + + V N+++ NL +++ + L +F FG I S V
Sbjct: 82 DLINGKPFRLMWSQPDDHLRKSGVG----NIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ D +G S+ + +V+F S AA A+ +NG N++ YVGR + ER A++R +
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 193
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
++ N+++KN D I+DEKLK+LFSE+G S KV+ D G SKG GF +
Sbjct: 194 ------DRATFTNVFVKNFGDDIDDEKLKKLFSEYGPTESVKVIRDATGKSKGFGFVRYE 247
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGY 418
E A +A+ E++GK I K L V AQ+K ER A L+ +F +++ P G+P Y
Sbjct: 248 THEAAQKAVLELHGKSIDGKVLCVGRAQKKIERLAELRRRFERLKLKDKTRP--PGVPIY 305
>gi|168229272|ref|NP_001094949.1| poly(A) binding protein, cytoplasmic 4-like [Mus musculus]
gi|148703238|gb|EDL35185.1| mCG12357 [Mus musculus]
Length = 370
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 177/370 (47%), Positives = 244/370 (65%), Gaps = 4/370 (1%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
++ + Y SLYVGDL ++V E L+ FS V V+S+R+CRD + SLGYAYVN+
Sbjct: 2 SLEAKYRAASLYVGDLHEDVTEDMLFRKFSTVGPVLSIRICRDLISQRSLGYAYVNFLQV 61
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A +NF I GK IR+M+S RD +R+SG GNVFIKNLD SIDNK L + F+ F
Sbjct: 62 NDAQKALVTMNFDVIKGKSIRLMWSQRDACLRRSGVGNVFIKNLDKSIDNKTLYEHFSPF 121
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER-A 198
GT++S KV D G SKGYGFV +++ AA AI+ +NG L+ + ++V F R++R A
Sbjct: 122 GTIMSSKVMTDGEG-SKGYGFVHYQDRRAADRAIEEMNGKLLRESTLFVARFKSRKDREA 180
Query: 199 QQNVSP-KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ P +FTNVY+ N + V DE L+++F +G S VMKD+ GKS+ FGFV+F S
Sbjct: 181 ELRDKPTEFTNVYIKNFGDDVDDEKLREVFSKYGQTLSVKVMKDATGKSKGFGFVSFDSH 240
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
+AA AVE +NG N + +VGRAQK+ ER+A+L+ FEQ + R + A LY+KNL
Sbjct: 241 EAAKNAVEDMNGQDINGQTIFVGRAQKKVERQAELKEMFEQMKKERIRARQAAKLYIKNL 300
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
DD+I+DE L++ FS FG+I KVM + G SKG G F PE A +A+ EMNG+++G
Sbjct: 301 DDTIDDETLRKEFSVFGSICRVKVM-QEAGQSKGFGLICFFSPEAAAKAMAEMNGRILGS 359
Query: 378 KPLYVAVAQR 387
KPL +A+ Q+
Sbjct: 360 KPLNIALGQK 369
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 161/291 (55%), Gaps = 22/291 (7%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQ-SKGYGFVQFENEEAAQNAIKM 175
++++ +L + L F+ G VLS ++ D Q S GY +V F AQ A+
Sbjct: 11 SLYVGDLHEDVTEDMLFRKFSTVGPVLSIRICRDLISQRSLGYAYVNFLQVNDAQKALVT 70
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFT---NVYVNNLAETVTDEDLKKIFGHFGT 232
+N +I K + R +Q++ + + NV++ NL +++ ++ L + F FGT
Sbjct: 71 MNFDVIKGKSI-------RLMWSQRDACLRRSGVGNVFIKNLDKSIDNKTLYEHFSPFGT 123
Query: 233 ITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADL 292
I S+ VM D +G S+ +GFV++Q AA A+E++NG + +V R + R +REA+L
Sbjct: 124 IMSSKVMTDGEG-SKGYGFVHYQDRRAADRAIEEMNGKLLRESTLFVARFKSRKDREAEL 182
Query: 293 RAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGS 352
R K + N+Y+KN D ++DEKL+E+FS++G S KVM D G SKG
Sbjct: 183 RDK----------PTEFTNVYIKNFGDDVDDEKLREVFSKYGQTLSVKVMKDATGKSKGF 232
Query: 353 GFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
GF +F E A A+ +MNG+ I + ++V AQ+K ER+A L+ F Q++
Sbjct: 233 GFVSFDSHEAAKNAVEDMNGQDINGQTIFVGRAQKKVERQAELKEMFEQMK 283
>gi|354466116|ref|XP_003495521.1| PREDICTED: polyadenylate-binding protein 4-like [Cricetulus
griseus]
gi|344243583|gb|EGV99686.1| Polyadenylate-binding protein 4-like [Cricetulus griseus]
Length = 370
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 177/370 (47%), Positives = 245/370 (66%), Gaps = 4/370 (1%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
++ + Y SLYVGDL ++V E L+ F+ V V+S+R+CRD R SLGYAYVN+
Sbjct: 2 SLEAKYRAASLYVGDLHEDVTEDVLFRKFNTVGPVLSIRICRDLVSRRSLGYAYVNFLQL 61
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GK IR+M+S RD +RKSG GNVFIKNLD SIDNK L + F+ F
Sbjct: 62 DDAQKALDTMNFDLIQGKSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSPF 121
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LS KV D G S+GYGFV ++++ AA AI+ +NG L+ D V+V F R++R
Sbjct: 122 GKILSSKVMSDEEG-SRGYGFVHYQDQSAADRAIEEMNGKLLRDCTVFVDRFKSRKDREA 180
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + + +FTNVY+ NL + + DE LK IF +G S VMKD +GKS+ FGFV+F +
Sbjct: 181 ELRSKTSEFTNVYIKNLGDNMDDEGLKNIFSKYGQTLSVKVMKDDNGKSKGFGFVSFYNH 240
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
+AA AVE++NG N + +VGRAQK+ ER+A+L+ KFEQ + R + A LY+KNL
Sbjct: 241 EAARNAVEEMNGQDINGQTIFVGRAQKKVERQAELKEKFEQMKKERIRARQAAKLYIKNL 300
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
D++I+DE L+ FS FG+I KVM + G SKG G F PE A +A+ EMNG+++G
Sbjct: 301 DETIDDETLRREFSSFGSICRVKVM-QEAGQSKGFGLICFFSPEAAAKAMAEMNGRILGS 359
Query: 378 KPLYVAVAQR 387
K L +A+ Q+
Sbjct: 360 KALNIALGQK 369
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 164/288 (56%), Gaps = 16/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L F G VLS ++ D + +S GY +V F + AQ A+
Sbjct: 11 SLYVGDLHEDVTEDVLFRKFNTVGPVLSIRICRDLVSRRSLGYAYVNFLQLDDAQKALDT 70
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N LI K + + ++ +R ++ NV++ NL +++ ++ L + F FG I S
Sbjct: 71 MNFDLIQGKSIRL-MWSQRDAYLRK---SGIGNVFIKNLDKSIDNKTLYEHFSPFGKILS 126
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ VM D +G SR +GFV++Q AA A+E++NG D +V R + R +REA+LR+K
Sbjct: 127 SKVMSDEEG-SRGYGFVHYQDQSAADRAIEEMNGKLLRDCTVFVDRFKSRKDREAELRSK 185
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ N+Y+KNL D+++DE LK +FS++G S KVM D +G SKG GF
Sbjct: 186 TSE----------FTNVYIKNLGDNMDDEGLKNIFSKYGQTLSVKVMKDDNGKSKGFGFV 235
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+F E A A+ EMNG+ I + ++V AQ+K ER+A L+ +F Q++
Sbjct: 236 SFYNHEAARNAVEEMNGQDINGQTIFVGRAQKKVERQAELKEKFEQMK 283
>gi|255549774|ref|XP_002515938.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223544843|gb|EEF46358.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 608
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 172/375 (45%), Positives = 244/375 (65%), Gaps = 3/375 (0%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
+SLYVGDL+ V E L +FS + + +V +CR SL Y YVN+ P DA A
Sbjct: 19 LSLYVGDLDPEVTEMNLRTVFSSMGPIRNVHLCRCSLTGRSLCYGYVNFYRPYDAYKALS 78
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LN + GK +RIM+ R+P RKSG GN+++KNLD SID+ L F+ FGT+LSCKV
Sbjct: 79 NLNHTYLKGKLMRIMWCQRNPCARKSGIGNLYVKNLDASIDSAGLQSLFSKFGTILSCKV 138
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER--AQQNVSPK 205
++ +G+SKGYGFVQF++E++A A L+ ++ +K++YV FV++ ER A K
Sbjct: 139 -VEEHGKSKGYGFVQFDSEDSALAARTALHDTMLKEKKLYVSRFVKKSERTTATSYDELK 197
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
FTN+YV NL++ +T + +F FG I SA++M+D +GKSR FGFV+F+SP+ A AV+
Sbjct: 198 FTNLYVKNLSKDMTQDAFHNMFSAFGEIISAVIMQDHNGKSRGFGFVDFESPEDAKKAVD 257
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LNG + +VGRAQ +AER+ L+ +++ + EK K +NLY+KNL I+++K
Sbjct: 258 ALNGYQLESRTLFVGRAQAKAERKKILQHEYKDIFNTHMEKFKASNLYVKNLALCIDNDK 317
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L+ELFS G I S KVM +G S+G GF FS PEEA +ALN +NG + K LYVA+A
Sbjct: 318 LQELFSCSGKIVSAKVMRYDNGASRGFGFVCFSSPEEAKKALNALNGAVFQGKSLYVAMA 377
Query: 386 QRKEERKARLQAQFA 400
Q K +R+ LQ F+
Sbjct: 378 QCKRDRQLALQTYFS 392
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 103/197 (52%), Gaps = 17/197 (8%)
Query: 17 TTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNY 76
TTA +LYV +L +++ + +++FS +++S + +D + +S G+ +V++
Sbjct: 188 TTATSYDELKFTNLYVKNLSKDMTQDAFHNMFSAFGEIISAVIMQDHNGKSR-GFGFVDF 246
Query: 77 SNPQDAANAKEALNFMPINGKPIRI-------------MYSHRD---PSIRKSGYGNVFI 120
+P+DA A +ALN + + + + + ++D + K N+++
Sbjct: 247 ESPEDAKKAVDALNGYQLESRTLFVGRAQAKAERKKILQHEYKDIFNTHMEKFKASNLYV 306
Query: 121 KNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGML 180
KNL IDN L + F+ G ++S KV NG S+G+GFV F + E A+ A+ LNG +
Sbjct: 307 KNLALCIDNDKLQELFSCSGKIVSAKVMRYDNGASRGFGFVCFSSPEEAKKALNALNGAV 366
Query: 181 INDKQVYVGLFVRRQER 197
K +YV + +++R
Sbjct: 367 FQGKSLYVAMAQCKRDR 383
>gi|328715672|ref|XP_001946271.2| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 964
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 211/537 (39%), Positives = 307/537 (57%), Gaps = 67/537 (12%)
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSP 204
VA D G SKGYGFV FE +++A +I+ +NGML+N K+V+VG FV R +R ++ +
Sbjct: 435 VAQDETGNSKGYGFVHFETKQSATQSIEKVNGMLLNGKKVFVGRFVGRNDREKELGQQAK 494
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
+TNVY+ N+ E V +++L ++F +GTITS VM DG SR FGFV F+ P A AV
Sbjct: 495 LYTNVYIKNIDENVNEKELFEMFKKYGTITSCKVMFKDDGSSRGFGFVAFEDPKEAEKAV 554
Query: 265 EKLNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIND 323
+L+G + + K +YV RAQK+ ER+ +L+ KFEQ +I R + +G NLY+KNLDD+I+D
Sbjct: 555 TELHGKKSPEGKTYYVNRAQKKTERQQELKRKFEQYKIERINRYQGVNLYVKNLDDTIDD 614
Query: 324 EKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVA 383
E+L+ FS FGTI S KVM+D G SKG GF FS PEEAT+A+ +MNG+++G KPLYV
Sbjct: 615 ERLRREFSAFGTIKSAKVMMDD-GRSKGFGFVYFSSPEEATKAVTDMNGRIVGTKPLYVT 673
Query: 384 VAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGA------PRLGPQQLYYG--QG 435
+AQRK++RKA L +Q++Q M + P Y GA P + Q +YG Q
Sbjct: 674 LAQRKKDRKAHLDSQYSQRNTNMRMQSIG---PIYQPGASNGYFVPTIPQPQYFYGPTQM 730
Query: 436 TPGLMPPQAAGYGFQQQVFPGL----RPGGPNYIMPYH---LQRQVHPGQRTGVRRSG-- 486
T P+ + FQ QV G PG PN + + V GQ+ + R+
Sbjct: 731 TQIRSQPR---WAFQSQVRAGTPQTAAPGYPNMATQHQNIGARAPVPAGQQAALARNVMV 787
Query: 487 -------NTHQMQQPQFM----------RNSNQGIRYLDNARN--GTDQSVVSMVP---- 523
+T Q + P + R++ G +Y N RN DQ + P
Sbjct: 788 DTNARPISTAQQKMPGAVSAGSVHVPGARDTGSGYKYTPNMRNPLSQDQGIGQAQPGQAQ 847
Query: 524 -----VPFEVSGM------PATPVETPRPVPVPIST-----LTSA-LASASPDDRTRMLG 566
P + GM A +E +P + LT+ LA+A P+D+ +MLG
Sbjct: 848 GMGQSQPGQAQGMGQAQSGQAQGMEQVQPDKAAVHVYGQEPLTATMLATAKPEDQKQMLG 907
Query: 567 EQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAAR 623
E+L+PL+E + P K+TGMLLE+D +++LH++E E+LK +V +A+A+LQ A+
Sbjct: 908 ERLFPLIERMYPELTGKITGMLLEIDNSDLLHMLEHHESLKNQVEKAVAMLQAHQAQ 964
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 143/252 (56%), Gaps = 22/252 (8%)
Query: 67 SSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRI-MYSHRDPSIRKSG-----YGNVFI 120
+S GY +V++ Q A + E +N M +NGK + + + R+ ++ G Y NV+I
Sbjct: 442 NSKGYGFVHFETKQSATQSIEKVNGMLLNGKKVFVGRFVGRNDREKELGQQAKLYTNVYI 501
Query: 121 KNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGML 180
KN+D +++ K L + F +GT+ SCKV +G S+G+GFV FE+ + A+ A+ L+G
Sbjct: 502 KNIDENVNEKELFEMFKKYGTITSCKVMFKDDGSSRGFGFVAFEDPKEAEKAVTELHGKK 561
Query: 181 IND-KQVYVGLFVRRQERAQQNVSPKF-------------TNVYVNNLAETVTDEDLKKI 226
+ K YV ++ ER QQ + KF N+YV NL +T+ DE L++
Sbjct: 562 SPEGKTYYVNRAQKKTER-QQELKRKFEQYKIERINRYQGVNLYVKNLDDTIDDERLRRE 620
Query: 227 FGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRA 286
F FGTI SA VM D DG+S+ FGFV F SP+ A AV +NG K YV AQ++
Sbjct: 621 FSAFGTIKSAKVMMD-DGRSKGFGFVYFSSPEEATKAVTDMNGRIVGTKPLYVTLAQRKK 679
Query: 287 EREADLRAKFEQ 298
+R+A L +++ Q
Sbjct: 680 DRKAHLDSQYSQ 691
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 105/191 (54%), Gaps = 23/191 (12%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVC-RDQSKRSSLGYAYVNYSNPQDAA 83
Y NV Y+ ++++NVNE +L+++F + + S +V +D SS G+ +V + +P++A
Sbjct: 496 YTNV--YIKNIDENVNEKELFEMFKKYGTITSCKVMFKDDG--SSRGFGFVAFEDPKEAE 551
Query: 84 NAKEALNFMPI-NGKPI----------------RIMYSHRDPSIRKSGYGNVFIKNLDTS 126
A L+ GK R ++ I + N+++KNLD +
Sbjct: 552 KAVTELHGKKSPEGKTYYVNRAQKKTERQQELKRKFEQYKIERINRYQGVNLYVKNLDDT 611
Query: 127 IDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQV 186
ID++ L F+AFGT+ S KV +D +G+SKG+GFV F + E A A+ +NG ++ K +
Sbjct: 612 IDDERLRREFSAFGTIKSAKVMMD-DGRSKGFGFVYFSSPEEATKAVTDMNGRIVGTKPL 670
Query: 187 YVGLFVRRQER 197
YV L R+++R
Sbjct: 671 YVTLAQRKKDR 681
>gi|157823445|ref|NP_001099899.1| polyadenylate-binding protein 4-like [Rattus norvegicus]
gi|149027259|gb|EDL82942.1| rCG37805 [Rattus norvegicus]
Length = 370
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 177/370 (47%), Positives = 241/370 (65%), Gaps = 4/370 (1%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
+V + Y SLYVGDL ++V E L+ F+ V V+S+R+CRD SLGY YVN+
Sbjct: 2 SVETKYRAASLYVGDLHEDVTEDLLFRKFNTVGPVLSIRICRDLISHRSLGYGYVNFLQV 61
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A E +NF I GK IR+M+S RD +RKSG GNVFIKNLD SIDNK L + F+ F
Sbjct: 62 GDAQKALETMNFDLIKGKSIRLMWSQRDACLRKSGIGNVFIKNLDKSIDNKTLYEHFSPF 121
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER-A 198
G ++S KV D G SKGYGFV ++++ AA AI+ +NG L+ D ++V F R++R A
Sbjct: 122 GKIMSSKVMTDEEG-SKGYGFVHYQDQRAADRAIEEMNGKLLRDSTLFVARFKSRKDREA 180
Query: 199 QQNVSP-KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ P +FTNVY+ N + + DE L+ +F +G S VMKD+ GKS+ FGFV+F S
Sbjct: 181 ELREKPAEFTNVYIKNFGDDMDDESLRSVFSKYGQTLSVKVMKDASGKSKRFGFVSFDSH 240
Query: 258 DAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
AA AVE +NG N + +VGRAQK+ ER+A+L+ FEQ + R + A LY+KNL
Sbjct: 241 KAAKNAVEDMNGRDINGQTIFVGRAQKKVERQAELKEMFEQMKKERIRARQAAKLYIKNL 300
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
DD+I+DE L++ FS FG+I KVM + G SKG G F PE A +A+ EMNG+++G
Sbjct: 301 DDTIDDETLRKEFSVFGSICRVKVM-QEAGQSKGFGLICFFSPEAAAKAMAEMNGRILGS 359
Query: 378 KPLYVAVAQR 387
KPL +A+ Q+
Sbjct: 360 KPLNIALGQK 369
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 158/291 (54%), Gaps = 22/291 (7%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L F G VLS ++ D + +S GYG+V F AQ A++
Sbjct: 11 SLYVGDLHEDVTEDLLFRKFNTVGPVLSIRICRDLISHRSLGYGYVNFLQVGDAQKALET 70
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPK---FTNVYVNNLAETVTDEDLKKIFGHFGT 232
+N LI K + R +Q++ + NV++ NL +++ ++ L + F FG
Sbjct: 71 MNFDLIKGKSI-------RLMWSQRDACLRKSGIGNVFIKNLDKSIDNKTLYEHFSPFGK 123
Query: 233 ITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADL 292
I S+ VM D +G S+ +GFV++Q AA A+E++NG D +V R + R +REA+L
Sbjct: 124 IMSSKVMTDEEG-SKGYGFVHYQDQRAADRAIEEMNGKLLRDSTLFVARFKSRKDREAEL 182
Query: 293 RAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGS 352
R K + N+Y+KN D ++DE L+ +FS++G S KVM D G SK
Sbjct: 183 REK----------PAEFTNVYIKNFGDDMDDESLRSVFSKYGQTLSVKVMKDASGKSKRF 232
Query: 353 GFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
GF +F + A A+ +MNG+ I + ++V AQ+K ER+A L+ F Q++
Sbjct: 233 GFVSFDSHKAAKNAVEDMNGRDINGQTIFVGRAQKKVERQAELKEMFEQMK 283
>gi|29336045|ref|NP_444344.1| polyadenylate-binding protein 5 [Mus musculus]
gi|26341316|dbj|BAC34320.1| unnamed protein product [Mus musculus]
gi|76827669|gb|AAI07363.1| Poly(A) binding protein, cytoplasmic 5 [Mus musculus]
gi|76828194|gb|AAI07364.1| Poly(A) binding protein, cytoplasmic 5 [Mus musculus]
gi|148701502|gb|EDL33449.1| poly A binding protein, cytoplasmic 5 [Mus musculus]
Length = 381
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 172/358 (48%), Positives = 237/358 (66%), Gaps = 5/358 (1%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL+ +V E LY F + R+CRD RS LGY YVN+ P DA A +NF
Sbjct: 21 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 80
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIKNLD +IDN+AL F+AFG +LSCKV D
Sbjct: 81 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKTIDNRALFYLFSAFGNILSCKVVCDD 140
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK---FTN 208
NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + + + FTN
Sbjct: 141 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRERATFTN 199
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V N + + DE L K+F +G S V++D+ GKS+ FGFV +++ +AA AV +L+
Sbjct: 200 VFVKNFGDDIDDEKLNKLFSEYGPTESVKVIRDATGKSKGFGFVRYETHEAAQKAVLELH 259
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G + + KV VGRAQK+ ER A+LR +FE+ ++ + G +Y+KNLD++INDEKLKE
Sbjct: 260 GKSIDGKVLCVGRAQKKIERLAELRRRFERLKLKEKNRPSGVPIYIKNLDETINDEKLKE 319
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
FS FG+I+ KVM++ G KG G FS EEA +A++EMNG++IG K L+V + Q
Sbjct: 320 EFSSFGSISRAKVMMEV-GQGKGFGVVCFSSFEEACKAVDEMNGRIIGSKTLHVTLGQ 376
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 159/300 (53%), Gaps = 17/300 (5%)
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKMLNG 178
+ +LD + L F G + ++ D +S GYG+V F A+ A+ +N
Sbjct: 21 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 80
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
LIN K + ++ + +R +++ N+++ NL +T+ + L +F FG I S V
Sbjct: 81 DLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKNLDKTIDNRALFYLFSAFGNILSCKV 136
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ D +G S+ + +V+F S AA A+ +NG N++ YVGR + ER A++R +
Sbjct: 137 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 192
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
E+ N+++KN D I+DEKL +LFSE+G S KV+ D G SKG GF +
Sbjct: 193 ------ERATFTNVFVKNFGDDIDDEKLNKLFSEYGPTESVKVIRDATGKSKGFGFVRYE 246
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGY 418
E A +A+ E++GK I K L V AQ+K ER A L+ +F +++ P SG+P Y
Sbjct: 247 THEAAQKAVLELHGKSIDGKVLCVGRAQKKIERLAELRRRFERLKLKEKNRP--SGVPIY 304
>gi|297834512|ref|XP_002885138.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330978|gb|EFH61397.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 542
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 184/435 (42%), Positives = 260/435 (59%), Gaps = 28/435 (6%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V E L FS V+SV +CR+ SL YAY+N+ +P A+NA
Sbjct: 22 SLYVGDLSPDVTEQDLIHRFSLTVPVLSVHLCRNSVTGKSLCYAYINFDSPFSASNAMAR 81
Query: 89 LNFMPINGKPIRIMYSHRDPSIRK-SGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LN + GK +RIM+S RD S R+ +G+GN+++KNLD SI + L F FG +LSCKV
Sbjct: 82 LNHTDLKGKAMRIMWSQRDLSYRRRTGFGNLYVKNLDISITSSGLERMFNPFGVILSCKV 141
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
++ NGQSKG+GFVQFE E++A A L+G +++ K+++V F+ + ER + FT
Sbjct: 142 -VEENGQSKGFGFVQFETEQSAVTARSALHGSMVDGKKLFVAKFINKNERVAMAGNKGFT 200
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NVYV NL E +T++ L ++F +GT++S +VM+D G+SR FGFVNF P+ A AV+ L
Sbjct: 201 NVYVKNLIENITEDILHRLFSQYGTVSSVVVMRDGMGRSRGFGFVNFCHPENAKKAVDSL 260
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
+G K +VG+A KR ER L+ K+ I++ ++ +NLY+KNL +S+ND L+
Sbjct: 261 HGRQVGSKTLFVGKALKRDERREMLKHKYRDNFIAK-SNMRWSNLYVKNLSESMNDTTLR 319
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
E+F +G I S KVM ++G SKG GF FS EE+ +A +NG + K L V VA+R
Sbjct: 320 EIFGRYGQIVSAKVMRHENGRSKGFGFVCFSNREESKQAKRYLNGFSVDGKLLVVRVAER 379
Query: 388 KEERKARLQAQF-AQIR-------APGGMSPLASGIPG-------YHHGAPRLGPQQLYY 432
KE+R RLQ F AQ R P P+ S +P +H GA YY
Sbjct: 380 KEDRLKRLQQYFHAQPRHYTQAPLVPSPAQPVLSYVPSSYGYLQPFHVGAS-------YY 432
Query: 433 GQGTPGLMPPQAAGY 447
GT PQ +G+
Sbjct: 433 YMGT---QLPQMSGH 444
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 108/192 (56%), Gaps = 18/192 (9%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
G+ NV YV +L +N+ E L+ LFSQ V SV V RD RS G+ +VN+ +P++A
Sbjct: 198 GFTNV--YVKNLIENITEDILHRLFSQYGTVSSVVVMRDGMGRSR-GFGFVNFCHPENAK 254
Query: 84 NAKEALNFMPINGKPI-----------RIMYSH--RDPSIRKSG--YGNVFIKNLDTSID 128
A ++L+ + K + R M H RD I KS + N+++KNL S++
Sbjct: 255 KAVDSLHGRQVGSKTLFVGKALKRDERREMLKHKYRDNFIAKSNMRWSNLYVKNLSESMN 314
Query: 129 NKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYV 188
+ L + F +G ++S KV NG+SKG+GFV F N E ++ A + LNG ++ K + V
Sbjct: 315 DTTLREIFGRYGQIVSAKVMRHENGRSKGFGFVCFSNREESKQAKRYLNGFSVDGKLLVV 374
Query: 189 GLFVRRQERAQQ 200
+ R+++R ++
Sbjct: 375 RVAERKEDRLKR 386
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 101/192 (52%), Gaps = 17/192 (8%)
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAA 261
S F ++YV +L+ VT++DL F + S + ++S GKS C+ ++NF SP +A+
Sbjct: 17 SSMFASLYVGDLSPDVTEQDLIHRFSLTVPVLSVHLCRNSVTGKSLCYAYINFDSPFSAS 76
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
A+ +LN T K +R + Q +S + NLY+KNLD SI
Sbjct: 77 NAMARLNHTDLKGKA---------------MRIMWSQRDLSYRRRTGFGNLYVKNLDISI 121
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
L+ +F+ FG I SCKV V+++G SKG GF F + A A + ++G M+ K L+
Sbjct: 122 TSSGLERMFNPFGVILSCKV-VEENGQSKGFGFVQFETEQSAVTARSALHGSMVDGKKLF 180
Query: 382 VAVAQRKEERKA 393
VA K ER A
Sbjct: 181 VAKFINKNERVA 192
>gi|6102944|emb|CAB59276.1| hypothetical protein [Homo sapiens]
Length = 367
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 178/361 (49%), Positives = 243/361 (67%), Gaps = 5/361 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
+LYVGDL+ +V E LY F + R+CRD RS LGY YVN+ P DA A
Sbjct: 4 ALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNT 63
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF INGKP R+M+S D +RKSG GN+FIKNLD SIDN+AL F+AFG +LSCKV
Sbjct: 64 MNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVV 123
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS---PK 205
D NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + +
Sbjct: 124 CDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRAT 182
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
FTNV+V N+ + + DE LK++F +G S V++D+ GKS+ FGFV +++ +AA AV
Sbjct: 183 FTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVL 242
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
L+G + + KV YVGRAQK+ ER A+LR +FE+ R+ + G +Y+KNLD++INDEK
Sbjct: 243 DLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEK 302
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
LKE FS FG+I+ KVM+ + G KG G FS EEAT+A++EMNG+++G KPL+V +
Sbjct: 303 LKEEFSSFGSISRAKVMM-EVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLG 361
Query: 386 Q 386
Q
Sbjct: 362 Q 362
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 150/277 (54%), Gaps = 15/277 (5%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKML 176
+++ +LD + L F G + ++ D +S GYG+V F A+ A+ +
Sbjct: 5 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 64
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSA 236
N LIN K + ++ + +R +++ N+++ NL +++ + L +F FG I S
Sbjct: 65 NFDLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKNLDKSIDNRALFYLFSAFGNILSC 120
Query: 237 IVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKF 296
V+ D +G S+ + +V+F S AA A+ +NG N++ YVGR + ER A++R +
Sbjct: 121 KVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR- 178
Query: 297 EQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAA 356
++ N+++KN+ D I+DEKLKELF E+G S KV+ D G SKG GF
Sbjct: 179 --------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVR 230
Query: 357 FSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
+ E A +A+ +++GK I K LYV AQ+K ER A
Sbjct: 231 YETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLA 267
>gi|74137801|dbj|BAE24074.1| unnamed protein product [Mus musculus]
Length = 550
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/303 (56%), Positives = 220/303 (72%), Gaps = 12/303 (3%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
NVFIKNLD SIDNKAL DTF+AFG +LSCKV D NG SKGY FV FE +EAA AI+ +
Sbjct: 1 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKM 59
Query: 177 NGMLINDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTIT 234
NG+L+ND++V+VG F R+ER + + +FTNVY+ N E V D +LK++F FG
Sbjct: 60 NGLLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTL 119
Query: 235 SAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRA 294
S VM+DS GKSR FGFV+++ + A AV+++NG + K +VGRAQK+ ER+A+L+
Sbjct: 120 SVKVMRDSSGKSRGFGFVSYEKHEDANKAVDEMNGKEMSGKAIFVGRAQKKVERQAELKR 179
Query: 295 KFEQ---ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKG 351
KFEQ ERISRY+ G NLY+KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG
Sbjct: 180 KFEQLKQERISRYQ---GVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKG 235
Query: 352 SGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPL 411
GF F EEAT+A+ EMNG+++G KPLYVA+AQRKEERKA L Q+ Q A G+ L
Sbjct: 236 FGFVCFPSREEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQHVA--GLRAL 293
Query: 412 ASG 414
+G
Sbjct: 294 PAG 296
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 163/289 (56%), Gaps = 23/289 (7%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
++++ +L+++++ LYD FS ++S +V D++ S GYA+V++ + A A E
Sbjct: 1 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYAFVHFETQEAADKAIEK 58
Query: 89 LNFMPINGKPIRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
+N + +N + + + R+ + + + NV+IKN +D+ L + F+ FG
Sbjct: 59 MNGLLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKT 118
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNV 202
LS KV DS+G+S+G+GFV +E E A A+ +NG ++ K ++VG ++ ER Q +
Sbjct: 119 LSVKVMRDSSGKSRGFGFVSYEKHEDANKAVDEMNGKEMSGKAIFVGRAQKKVER-QAEL 177
Query: 203 SPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCF 249
KF N+Y+ NL +T+ DE L+K F FG+ITSA VM + DG+S+ F
Sbjct: 178 KRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGF 236
Query: 250 GFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
GFV F S + A AV ++NG K YV AQ++ ER+A L ++ Q
Sbjct: 237 GFVCFPSREEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQ 285
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
Query: 533 ATPVETPRPVPVPISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEM 591
A+ V +P P LT S LA+A P ++ +MLGE+L+PL++ + A K+TGMLLE+
Sbjct: 444 ASSVRSPHPTIQRQEPLTASMLAAARPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEI 503
Query: 592 DQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
+E+LH++E+PE+L +KV EA+AVLQE A+ + +K+G++A
Sbjct: 504 GNSELLHMLETPESLCSKVDEAVAVLQEHHAKKEAAQKVGTVA 546
>gi|354499752|ref|XP_003511970.1| PREDICTED: polyadenylate-binding protein 5-like [Cricetulus
griseus]
gi|344240775|gb|EGV96878.1| Polyadenylate-binding protein 5 [Cricetulus griseus]
Length = 382
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 171/358 (47%), Positives = 233/358 (65%), Gaps = 5/358 (1%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL V E LY F + R+CRD S LGY YVN+ P DA A +NF
Sbjct: 22 VGDLGPEVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIK+LD SIDN+ L F+AFG +LSCKV D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKHLDKSIDNRTLFYLFSAFGNILSCKVVCDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS---PKFTN 208
NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + + FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVWLNNRQVYVGRFKFPEERAAEVRTRDRATFTN 200
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V NL + + DE LK++F +G S V++D+ GKS+ FGFV +++ +AA +V L+
Sbjct: 201 VFVKNLGDNMDDEKLKELFSEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKSVLDLH 260
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G T + KV YVGRAQK+ ER A+LR +FE+ ++ + G +Y+KNLD++I+DEKLKE
Sbjct: 261 GKTIDGKVLYVGRAQKKIERLAELRRRFERLKLKEKSRPPGVPIYIKNLDETIDDEKLKE 320
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
FS FG+I+ KVM++ G KG FS EEAT+A++EMNG ++G KPL V + Q
Sbjct: 321 EFSSFGSISRAKVMMEM-GQGKGFAVVCFSSFEEATKAVDEMNGPVLGSKPLSVTLGQ 377
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 148/262 (56%), Gaps = 16/262 (6%)
Query: 157 GYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAE 216
GYG+V F A+ A+ +N LIN K + ++ + +R +++ N+++ +L +
Sbjct: 60 GYGYVNFRFPADAEWALNTMNFDLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKHLDK 115
Query: 217 TVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKV 276
++ + L +F FG I S V+ D +G S+ + +V+F S AA A+ +NG N++
Sbjct: 116 SIDNRTLFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVWLNNRQ 174
Query: 277 WYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTI 336
YVGR + ER A++R + ++ N+++KNL D+++DEKLKELFSE+G
Sbjct: 175 VYVGRFKFPEERAAEVRTR---------DRATFTNVFVKNLGDNMDDEKLKELFSEYGPT 225
Query: 337 TSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQ 396
S KV+ D G SKG GF + E A +++ +++GK I K LYV AQ+K ER A L+
Sbjct: 226 ESVKVIRDASGKSKGFGFVRYETHEAAQKSVLDLHGKTIDGKVLYVGRAQKKIERLAELR 285
Query: 397 AQFAQIRAPGGMSPLASGIPGY 418
+F +++ P G+P Y
Sbjct: 286 RRFERLKLKEKSRP--PGVPIY 305
>gi|15228191|ref|NP_188259.1| poly(A) binding protein 6 [Arabidopsis thaliana]
gi|2062166|gb|AAB63640.1| poly(A)-binding protein isolog [Arabidopsis thaliana]
gi|9279720|dbj|BAB01277.1| poly(A) binding protein-like [Arabidopsis thaliana]
gi|332642284|gb|AEE75805.1| poly(A) binding protein 6 [Arabidopsis thaliana]
Length = 537
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 174/390 (44%), Positives = 250/390 (64%), Gaps = 10/390 (2%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V E L D FS VVSV +CR+ S+ YAY+N+ +P A+NA
Sbjct: 22 SLYVGDLSPDVTEKDLIDKFSLNVPVVSVHLCRNSVTGKSMCYAYINFDSPFSASNAMTR 81
Query: 89 LNFMPINGKPIRIMYSHRDPSIRK---SGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSC 145
LN + GK +RIM+S RD + R+ +G+ N+++KNLD+SI + L F FG++LSC
Sbjct: 82 LNHSDLKGKAMRIMWSQRDLAYRRRTRTGFANLYVKNLDSSITSSCLERMFCPFGSILSC 141
Query: 146 KVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK 205
KV ++ NGQSKG+GFVQF+ E++A +A L+G ++ K+++V F+ + ERA +
Sbjct: 142 KV-VEENGQSKGFGFVQFDTEQSAVSARSALHGSMVYGKKLFVAKFINKDERAAMAGNQD 200
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
TNVYV NL ETVTD+ L +F +GT++S +VM+D G+SR FGFVNF +P+ A A+E
Sbjct: 201 STNVYVKNLIETVTDDCLHTLFSQYGTVSSVVVMRDGMGRSRGFGFVNFCNPENAKKAME 260
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
L G K +VG+A K+ ER L+ KF I++ ++ +NLY+KNL +S+N+ +
Sbjct: 261 SLCGLQLGSKKLFVGKALKKDERREMLKQKFSDNFIAK-PNMRWSNLYVKNLSESMNETR 319
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L+E+F +G I S KVM ++G SKG GF FS EE+ +A +NG ++ KP+ V VA
Sbjct: 320 LREIFGCYGQIVSAKVMCHENGRSKGFGFVCFSNCEESKQAKRYLNGFLVDGKPIVVRVA 379
Query: 386 QRKEERKARLQAQF-AQIR----APGGMSP 410
+RKE+R RLQ F AQ R AP SP
Sbjct: 380 ERKEDRIKRLQQYFQAQPRQYTQAPSAPSP 409
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 103/192 (53%), Gaps = 15/192 (7%)
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAA 261
S +F ++YV +L+ VT++DL F + S + ++S GKS C+ ++NF SP +A+
Sbjct: 17 SSRFGSLYVGDLSPDVTEKDLIDKFSLNVPVVSVHLCRNSVTGKSMCYAYINFDSPFSAS 76
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
A+ +LN + K + +Q+ R F ANLY+KNLD SI
Sbjct: 77 NAMTRLNHSDLKGKAMRIMWSQRDLAYRRRTRTGF-------------ANLYVKNLDSSI 123
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
L+ +F FG+I SCKV V+++G SKG GF F + A A + ++G M+ K L+
Sbjct: 124 TSSCLERMFCPFGSILSCKV-VEENGQSKGFGFVQFDTEQSAVSARSALHGSMVYGKKLF 182
Query: 382 VAVAQRKEERKA 393
VA K+ER A
Sbjct: 183 VAKFINKDERAA 194
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 108/200 (54%), Gaps = 22/200 (11%)
Query: 19 AAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSN 78
AA+ + ++YV +L + V + L+ LFSQ V SV V RD RS G+ +VN+ N
Sbjct: 193 AAMAGNQDSTNVYVKNLIETVTDDCLHTLFSQYGTVSSVVVMRDGMGRSR-GFGFVNFCN 251
Query: 79 PQDAANAKEALNFMPINGKPI-----------RIMYSHR-------DPSIRKSGYGNVFI 120
P++A A E+L + + K + R M + P++R + N+++
Sbjct: 252 PENAKKAMESLCGLQLGSKKLFVGKALKKDERREMLKQKFSDNFIAKPNMR---WSNLYV 308
Query: 121 KNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGML 180
KNL S++ L + F +G ++S KV NG+SKG+GFV F N E ++ A + LNG L
Sbjct: 309 KNLSESMNETRLREIFGCYGQIVSAKVMCHENGRSKGFGFVCFSNCEESKQAKRYLNGFL 368
Query: 181 INDKQVYVGLFVRRQERAQQ 200
++ K + V + R+++R ++
Sbjct: 369 VDGKPIVVRVAERKEDRIKR 388
>gi|296235923|ref|XP_002763106.1| PREDICTED: polyadenylate-binding protein 5 [Callithrix jacchus]
gi|14571652|emb|CAC42812.1| Poly(A)-binding protein cytoplasmic 5 [Callithrix jacchus]
Length = 382
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 177/358 (49%), Positives = 240/358 (67%), Gaps = 5/358 (1%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL+ +V E LY F + R+CRD RS LGY YVN+ P DA A +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIKNLD SIDN+AL F+AFG +LSCKV D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS---PKFTN 208
NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + + FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTN 200
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V N+ E + DE LK++F +G S V++D+ GKS+ FGFV +++ +AA AV L+
Sbjct: 201 VFVKNIGEDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G + + KV YVGRAQK+ ER A+LR +FE+ R+ + G +Y+KNLD++INDEKLKE
Sbjct: 261 GKSVDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKE 320
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
FS FG+I+ KVM+ + G KG G FS EEAT+A++EMNG+++G KPL+V + Q
Sbjct: 321 EFSSFGSISRAKVMM-EVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 148/275 (53%), Gaps = 15/275 (5%)
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKMLNG 178
+ +LD + L F G + ++ D +S GYG+V F A+ A+ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
LIN K + ++ + +R +++ N+++ NL +++ + L +F FG I S V
Sbjct: 82 DLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ D +G S+ + +V+F S AA A+ +NG N++ YVGR + ER A++R +
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 193
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
++ N+++KN+ + I+DEKLKELF E+G S KV+ D G SKG GF +
Sbjct: 194 ------DRATFTNVFVKNIGEDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
E A +A+ +++GK + K LYV AQ+K ER A
Sbjct: 248 THEAAQKAVLDLHGKSVDGKVLYVGRAQKKIERLA 282
>gi|380503877|ref|NP_001244114.1| polyadenylate-binding protein 5 [Equus caballus]
Length = 382
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 177/358 (49%), Positives = 240/358 (67%), Gaps = 5/358 (1%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL+ +V E LY F + R+CRD RS LGY YVN+ P DA A +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIKNLD SIDN+AL F+AFG +LSCKV D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS---PKFTN 208
NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + + FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTN 200
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V N + + DE LK+IF +G+ S V++D+ GKS+ FGFV +++ +AA AV L+
Sbjct: 201 VFVKNFGDDMDDEKLKEIFSEYGSTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G + + KV YVGRAQK+ ER A+LR +FE+ R+ + G +Y+KNLD++I+DEKLKE
Sbjct: 261 GKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRAPGVPIYIKNLDETIDDEKLKE 320
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
FS FG+I+ KVMV + G KG G FS EEAT+A++EMNG+++G KPL+V + Q
Sbjct: 321 EFSSFGSISRAKVMV-EVGQGKGFGVVCFSSFEEATKAVDEMNGRIMGSKPLHVTLGQ 377
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 149/275 (54%), Gaps = 15/275 (5%)
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKMLNG 178
+ +LD + L F G + ++ D +S GYG+V F A+ A+ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
LIN K + ++ + +R +++ N+++ NL +++ + L +F FG I S V
Sbjct: 82 DLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ D +G S+ + +V+F S AA A+ +NG N++ YVGR + ER A++R +
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 193
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
++ N+++KN D ++DEKLKE+FSE+G+ S KV+ D G SKG GF +
Sbjct: 194 ------DRATFTNVFVKNFGDDMDDEKLKEIFSEYGSTESVKVIRDASGKSKGFGFVRYE 247
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
E A +A+ +++GK I K LYV AQ+K ER A
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLA 282
>gi|47223169|emb|CAG11304.1| unnamed protein product [Tetraodon nigroviridis]
Length = 642
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 184/391 (47%), Positives = 242/391 (61%), Gaps = 30/391 (7%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY FS ++S+RVCRD R SLGYAY+N+ P D +
Sbjct: 8 YPLASLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINFQQPADGSE 67
Query: 85 -AKEALNFMPINGK------PIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFA 137
+F +G+ +R + R+ S+ + G G + LC
Sbjct: 68 EVGRGKHFYQEHGRVHRQQGAVRHLLRIREHSVLQ-GKGQ----------RCQGLCRDAG 116
Query: 138 A--FGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ 195
G +V D G SKGYGFV FE EEAA AI+ +NGML+ND++V+VG F R+
Sbjct: 117 GDVTGRTALFQVVCDERG-SKGYGFVHFETEEAANRAIETMNGMLLNDRKVFVGNFKSRK 175
Query: 196 ERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVN 253
ER ++ + + KFTNVY+ N E TDE LK++F FG S VMKD G+SR FGFVN
Sbjct: 176 EREEELGSKALKFTNVYIKNFGEDYTDEKLKEVFSAFGRTLSVRVMKDERGRSRGFGFVN 235
Query: 254 FQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERISRYEKLKGA 310
F A AV+++NGT N KV YVGRAQKR ER+ +L+ KFE Q+RI RY+ G
Sbjct: 236 FAHHGDAQKAVDEMNGTELNGKVIYVGRAQKRLERQGELKRKFELIKQDRIQRYQ---GV 292
Query: 311 NLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEM 370
NLY+KNLDD I+DE+L++ F+ +GTITS KVM D S+G GF FS PEEAT+A+ EM
Sbjct: 293 NLYVKNLDDGIDDERLRKEFAPYGTITSAKVMTDGPQ-SRGFGFVCFSSPEEATKAVTEM 351
Query: 371 NGKMIGRKPLYVAVAQRKEERKARLQAQFAQ 401
NG+++ KPLYVA+AQR+EERKA L ++ Q
Sbjct: 352 NGRIVATKPLYVALAQRREERKAILTNKYMQ 382
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 144/293 (49%), Gaps = 28/293 (9%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFE-----NEEAAQ 170
++++ +L + L F+ G ++S +V D +S GY ++ F+ +EE +
Sbjct: 12 SLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINFQQPADGSEEVGR 71
Query: 171 NAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHF 230
++ +Q V +R +E + + + VT
Sbjct: 72 GKHFYQEHGRVHRQQGAVRHLLRIREHSVLQGKGQRCQGLCRDAGGDVT----------- 120
Query: 231 GTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREA 290
G V+ D G S+ +GFV+F++ +AA A+E +NG ND+ +VG + R ERE
Sbjct: 121 GRTALFQVVCDERG-SKGYGFVHFETEEAANRAIETMNGMLLNDRKVFVGNFKSRKEREE 179
Query: 291 DLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSK 350
+L +K LK N+Y+KN + DEKLKE+FS FG S +VM D+ G S+
Sbjct: 180 ELGSK----------ALKFTNVYIKNFGEDYTDEKLKEVFSAFGRTLSVRVMKDERGRSR 229
Query: 351 GSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
G GF F+ +A +A++EMNG + K +YV AQ++ ER+ L+ +F I+
Sbjct: 230 GFGFVNFAHHGDAQKAVDEMNGTELNGKVIYVGRAQKRLERQGELKRKFELIK 282
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 549 LTSALASASP-DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALK 607
LT+++ +A+P D+ ++LGE+LYPL+ + P A K+TGMLLE+D +E+LH++E+PE+L
Sbjct: 531 LTASMLAAAPLMDQKQLLGERLYPLISALHPNLAGKITGMLLEIDNSELLHMLETPESLH 590
Query: 608 TKVAEAMAVL 617
+KV+ + L
Sbjct: 591 SKVSSRSSTL 600
>gi|403295651|ref|XP_003938748.1| PREDICTED: polyadenylate-binding protein 5 [Saimiri boliviensis
boliviensis]
Length = 382
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/358 (49%), Positives = 240/358 (67%), Gaps = 5/358 (1%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL+ +V E LY F + R+CRD RS LGY YVN+ P DA A +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIKNLD SIDN+AL F+AFG +LSCKV D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS---PKFTN 208
NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + + FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTN 200
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V N+ + + DE LK++F +G S V++D+ GKS+ FGFV +++ +AA AV L+
Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G + + KV YVGRAQK+ ER A+LR +FE+ R+ + G +Y+KNLD++INDEKLKE
Sbjct: 261 GKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKE 320
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
FS FG+I+ KVM+ + G KG G FS EEAT+A++EMNG+++G KPL+V + Q
Sbjct: 321 EFSSFGSISRAKVML-EVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 148/275 (53%), Gaps = 15/275 (5%)
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKMLNG 178
+ +LD + L F G + ++ D +S GYG+V F A+ A+ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
LIN K + ++ + +R +++ N+++ NL +++ + L +F FG I S V
Sbjct: 82 DLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ D +G S+ + +V+F S AA A+ +NG N++ YVGR + ER A++R +
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 193
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
++ N+++KN+ D I+DEKLKELF E+G S KV+ D G SKG GF +
Sbjct: 194 ------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
E A +A+ +++GK I K LYV AQ+K ER A
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLA 282
>gi|18201888|ref|NP_543022.1| polyadenylate-binding protein 5 [Homo sapiens]
gi|115392093|ref|NP_001065269.1| polyadenylate-binding protein 5 [Pan troglodytes]
gi|332239776|ref|XP_003269075.1| PREDICTED: polyadenylate-binding protein 5 [Nomascus leucogenys]
gi|426396593|ref|XP_004064521.1| PREDICTED: polyadenylate-binding protein 5-like [Gorilla gorilla
gorilla]
gi|28201851|sp|Q96DU9.1|PABP5_HUMAN RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|38502886|sp|P60047.1|PABP5_GORGO RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|38502887|sp|P60048.1|PABP5_HYLLA RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|38502888|sp|P60049.1|PABP5_PANTR RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|38502889|sp|P60050.1|PABP5_PONPY RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|14571705|emb|CAC42817.1| Poly(A)-binding protein cytoplasmic 5 [Gorilla gorilla]
gi|14571711|emb|CAC42818.1| Poly(A)-binding protein cytoplasmic 5 [Hylobates lar]
gi|14571756|emb|CAC42822.1| Poly(A)-binding protein cytoplasmic 5 [Pongo pygmaeus]
gi|14571764|emb|CAC42823.1| poly(A)-binding protein cytoplasmic 5 [Pan troglodytes]
gi|14572616|emb|CAC42826.1| Poly(A)-binding protein cytoplasmic 5 [Homo sapiens]
gi|38649270|gb|AAH63113.1| Poly(A) binding protein, cytoplasmic 5 [Homo sapiens]
gi|119623181|gb|EAX02776.1| poly(A) binding protein, cytoplasmic 5 [Homo sapiens]
gi|158261233|dbj|BAF82794.1| unnamed protein product [Homo sapiens]
gi|208968659|dbj|BAG74168.1| poly(A) binding protein, cytoplasmic 5 [synthetic construct]
gi|312151110|gb|ADQ32067.1| poly(A) binding protein, cytoplasmic 5 [synthetic construct]
gi|410208314|gb|JAA01376.1| poly(A) binding protein, cytoplasmic 5 [Pan troglodytes]
gi|410305648|gb|JAA31424.1| poly(A) binding protein, cytoplasmic 5 [Pan troglodytes]
Length = 382
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/358 (49%), Positives = 240/358 (67%), Gaps = 5/358 (1%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL+ +V E LY F + R+CRD RS LGY YVN+ P DA A +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIKNLD SIDN+AL F+AFG +LSCKV D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS---PKFTN 208
NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + + FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTN 200
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V N+ + + DE LK++F +G S V++D+ GKS+ FGFV +++ +AA AV L+
Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G + + KV YVGRAQK+ ER A+LR +FE+ R+ + G +Y+KNLD++INDEKLKE
Sbjct: 261 GKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKE 320
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
FS FG+I+ KVM+ + G KG G FS EEAT+A++EMNG+++G KPL+V + Q
Sbjct: 321 EFSSFGSISRAKVMM-EVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 148/275 (53%), Gaps = 15/275 (5%)
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKMLNG 178
+ +LD + L F G + ++ D +S GYG+V F A+ A+ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
LIN K + ++ + +R +++ N+++ NL +++ + L +F FG I S V
Sbjct: 82 DLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ D +G S+ + +V+F S AA A+ +NG N++ YVGR + ER A++R +
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 193
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
++ N+++KN+ D I+DEKLKELF E+G S KV+ D G SKG GF +
Sbjct: 194 ------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
E A +A+ +++GK I K LYV AQ+K ER A
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLA 282
>gi|197097448|ref|NP_001126434.1| polyadenylate-binding protein 5 [Pongo abelii]
gi|55731438|emb|CAH92432.1| hypothetical protein [Pongo abelii]
Length = 382
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/358 (49%), Positives = 240/358 (67%), Gaps = 5/358 (1%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL+ +V E LY F + R+CRD RS LGY YVN+ P DA A +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIKNLD SIDN+AL F+AFG +LSCKV D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGDILSCKVVCDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS---PKFTN 208
NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + + FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTN 200
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V N+ + + DE LK++F +G S V++D+ GKS+ FGFV +++ +AA AV L+
Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G + + KV YVGRAQK+ ER A+LR +FE+ R+ + G +Y+KNLD++INDEKLKE
Sbjct: 261 GKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKE 320
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
FS FG+I+ KVM+ + G KG G FS EEAT+A++EMNG+++G KPL+V + Q
Sbjct: 321 EFSSFGSISRAKVMM-EVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 148/275 (53%), Gaps = 15/275 (5%)
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKMLNG 178
+ +LD + L F G + ++ D +S GYG+V F A+ A+ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
LIN K + ++ + +R +++ N+++ NL +++ + L +F FG I S V
Sbjct: 82 DLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKNLDKSIDNRALFYLFSAFGDILSCKV 137
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ D +G S+ + +V+F S AA A+ +NG N++ YVGR + ER A++R +
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 193
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
++ N+++KN+ D I+DEKLKELF E+G S KV+ D G SKG GF +
Sbjct: 194 ------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
E A +A+ +++GK I K LYV AQ+K ER A
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLA 282
>gi|113461967|ref|NP_001038193.1| polyadenylate-binding protein 5 [Macaca mulatta]
gi|402910717|ref|XP_003918003.1| PREDICTED: polyadenylate-binding protein 5 [Papio anubis]
gi|50400917|sp|Q7JGR2.1|PABP5_MACMU RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|14571725|emb|CAC42819.1| Poly(A)-binding protein cytoplasmic 5 [Macaca mulatta]
gi|14571737|emb|CAC42821.1| Poly(A)-binding protein cytoplasmic 5 [Miopithecus talapoin]
gi|90082100|dbj|BAE90331.1| unnamed protein product [Macaca fascicularis]
gi|355704969|gb|EHH30894.1| Polyadenylate-binding protein 5 [Macaca mulatta]
gi|355757521|gb|EHH61046.1| Polyadenylate-binding protein 5 [Macaca fascicularis]
Length = 382
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/358 (49%), Positives = 240/358 (67%), Gaps = 5/358 (1%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL+ +V E LY F + R+CRD RS LGY YVN+ P DA A +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIKNLD SIDN+AL F+AFG +LSCKV D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS---PKFTN 208
NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + + FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTN 200
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V N+ + + DE LK++F +G S V++D+ GKS+ FGFV +++ +AA AV L+
Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G + + KV YVGRAQK+ ER A+LR +FE+ R+ + G +Y+KNLD++INDEKLKE
Sbjct: 261 GKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKE 320
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
FS FG+I+ KVM+ + G KG G FS EEAT+A++EMNG+++G KPL+V + Q
Sbjct: 321 EFSSFGSISRAKVMM-EVGQGKGFGVVCFSSFEEATKAVDEMNGRVVGSKPLHVTLGQ 377
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 148/275 (53%), Gaps = 15/275 (5%)
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKMLNG 178
+ +LD + L F G + ++ D +S GYG+V F A+ A+ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
LIN K + ++ + +R +++ N+++ NL +++ + L +F FG I S V
Sbjct: 82 DLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ D +G S+ + +V+F S AA A+ +NG N++ YVGR + ER A++R +
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 193
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
++ N+++KN+ D I+DEKLKELF E+G S KV+ D G SKG GF +
Sbjct: 194 ------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
E A +A+ +++GK I K LYV AQ+K ER A
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLA 282
>gi|351705901|gb|EHB08820.1| Polyadenylate-binding protein 5 [Heterocephalus glaber]
Length = 382
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 176/358 (49%), Positives = 240/358 (67%), Gaps = 5/358 (1%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL+ +V E LY F + R+CRD RS LGY YVN+ P DA A +NF
Sbjct: 22 VGDLDADVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIKNLD SIDN+ L F+AFG +LSCKV D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRGLFYLFSAFGNILSCKVVCDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS---PKFTN 208
NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + + FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTN 200
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V NL + + DE LK++F +G I S V++D+ GKS+ FGFV +++ +AA AV +L+
Sbjct: 201 VFVKNLGDDMNDEKLKELFSEYGQIESVKVVRDASGKSKGFGFVKYETHEAAQKAVLELH 260
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G + + KV YVGRAQK+ ER A+LR +FE+ R+ + G +Y+KNLD+SI+DEKLKE
Sbjct: 261 GKSMDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDESIDDEKLKE 320
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
FS FG+I+ KVM+ + G KG G FS EEAT+A++EMNG+++G K L+V + Q
Sbjct: 321 EFSSFGSISRAKVMM-EVGQGKGFGVVCFSSFEEATKAVDEMNGRLVGSKALHVTLGQ 377
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 150/275 (54%), Gaps = 15/275 (5%)
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKMLNG 178
+ +LD + L F G + ++ D +S GYG+V F A+ A+ +N
Sbjct: 22 VGDLDADVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
LIN K + ++ + +R +++ N+++ NL +++ + L +F FG I S V
Sbjct: 82 DLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKNLDKSIDNRGLFYLFSAFGNILSCKV 137
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ D +G S+ + +V+F S AA A+ +NG N++ YVGR + ER A++R +
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 193
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
++ N+++KNL D +NDEKLKELFSE+G I S KV+ D G SKG GF +
Sbjct: 194 ------DRATFTNVFVKNLGDDMNDEKLKELFSEYGQIESVKVVRDASGKSKGFGFVKYE 247
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
E A +A+ E++GK + K LYV AQ+K ER A
Sbjct: 248 THEAAQKAVLELHGKSMDGKVLYVGRAQKKIERLA 282
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 155/282 (54%), Gaps = 24/282 (8%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ ++ +L+++++ L+ LFS ++S +V D + S GYAYV++ + A
Sbjct: 103 SGVGNI--FIKNLDKSIDNRGLFYLFSAFGNILSCKVVCDDN--GSKGYAYVHFDSLAAA 158
Query: 83 ANAKEALNFMPINGKPIRI----MYSHRDPSIR---KSGYGNVFIKNLDTSIDNKALCDT 135
A +N + +N + + + R +R ++ + NVF+KNL ++++ L +
Sbjct: 159 NRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNLGDDMNDEKLKEL 218
Query: 136 FAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ 195
F+ +G + S KV D++G+SKG+GFV++E EAAQ A+ L+G ++ K +YVG ++
Sbjct: 219 FSEYGQIESVKVVRDASGKSKGFGFVKYETHEAAQKAVLELHGKSMDGKVLYVGRAQKKI 278
Query: 196 ER------------AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
ER ++ P +Y+ NL E++ DE LK+ F FG+I+ A VM +
Sbjct: 279 ERLAELRRRFERLRLKEKSRPPGVPIYIKNLDESIDDEKLKEEFSSFGSISRAKVMMEV- 337
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
G+ + FG V F S + A AV+++NG K +V Q R
Sbjct: 338 GQGKGFGVVCFSSFEEATKAVDEMNGRLVGSKALHVTLGQVR 379
>gi|401430030|ref|XP_003879497.1| putative polyadenylate-binding protein 1 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495747|emb|CBZ31053.1| putative polyadenylate-binding protein 1 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 564
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 171/382 (44%), Positives = 237/382 (62%), Gaps = 18/382 (4%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
S+YVGDL+ +NE QL +LF +++VRVCRD + SLGY YVN+ N + A A E+
Sbjct: 26 SIYVGDLDAAINEPQLVELFKPFGTILNVRVCRDIITQRSLGYGYVNFDNHESAEKAIES 85
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF + K +R+M+ RDP++R SG GNVF+KNL+ +D+K+L D F FG++LSCKV
Sbjct: 86 MNFKRVGDKCVRLMWQQRDPALRYSGNGNVFVKNLEKDVDSKSLHDIFTKFGSILSCKVM 145
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLI----NDKQVYVGLFVRRQERAQQNVSP 204
D G+S+GYGFV F++E +A++AI +NG + K +YV F+RR R V+
Sbjct: 146 QDEEGKSRGYGFVHFKDETSAKDAIVKMNGAADHASEDKKALYVANFIRRNARLAALVA- 204
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTNVY+ + TV+ E ++K F FG ITSA KD G R F F NF+ D A AV
Sbjct: 205 NFTNVYIKQVLPTVSKEVIEKFFAKFGGITSAAACKDKSG--RVFAFCNFEKHDDAVKAV 262
Query: 265 E-----KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDD 319
E ++G T + YV RAQ R+ER LR K+ Q ++ L G NLY++N D
Sbjct: 263 EAMHDHHIDGITAPGEKLYVQRAQPRSERLIALRQKYMQ-----HQSL-GNNLYVRNFDP 316
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
L ELF E+G + SC+VMV + G S+G GF +FS +EA AL EMNG+M+ KP
Sbjct: 317 EFTGADLLELFKEYGDVKSCRVMVSESGASRGFGFVSFSNADEANAALREMNGRMLNGKP 376
Query: 380 LYVAVAQRKEERKARLQAQFAQ 401
L V +AQR+++R L+ QF Q
Sbjct: 377 LIVNIAQRRDQRYTMLRLQFQQ 398
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 525 PFEVSGMPATPVETPRPVPV--PISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHA 581
P V + ATP +P P P+ +T L S SP ++ LG++L+ V I P A
Sbjct: 463 PSAVGFVQATPKHSPGDAPETPPLPPITPQELESMSPQEQRAALGDRLFLKVYEIAPELA 522
Query: 582 SKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
K+TGM LEM E L+ + L+ +V EA+ VL+
Sbjct: 523 PKITGMFLEMKPKEAYELLNDQKRLEDRVTEALCVLK 559
>gi|410988961|ref|XP_004000741.1| PREDICTED: polyadenylate-binding protein 5 [Felis catus]
Length = 382
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 179/359 (49%), Positives = 239/359 (66%), Gaps = 7/359 (1%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL+ +V E LY F + R+CRD RS LGY YVN+ P DA A +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIKNLD SIDN+AL F+AFG +LSCKV D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK----FT 207
NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + V K FT
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAE-VRTKDRATFT 199
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NV+V N + + DE LK+IF +G S V++D+ GKS+ FGFV +++ +AA AV L
Sbjct: 200 NVFVKNFGDDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
+G + N KV YVGRAQK+ ER A+LR +FE+ R+ + G +Y+KNLD++I+DEKLK
Sbjct: 260 HGKSINGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETIDDEKLK 319
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
E FS FG+I+ KVMV + G KG G FS E+AT+A++EMNG+ +G KPL+V + Q
Sbjct: 320 EEFSSFGSISRAKVMV-EVGQGKGFGVVCFSSFEDATKAVDEMNGRTVGSKPLHVTLGQ 377
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 147/275 (53%), Gaps = 15/275 (5%)
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKMLNG 178
+ +LD + L F G + ++ D +S GYG+V F A+ A+ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
LIN K + ++ + +R +++ N+++ NL +++ + L +F FG I S V
Sbjct: 82 DLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ D +G S+ + +V+F S AA A+ +NG N++ YVGR + ER A++R K
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTK--- 193
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
++ N+++KN D ++DEKLKE+FS +G S KV+ D G SKG GF +
Sbjct: 194 ------DRATFTNVFVKNFGDDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
E A +A+ +++GK I K LYV AQ+K ER A
Sbjct: 248 THEAAQKAVLDLHGKSINGKVLYVGRAQKKIERLA 282
>gi|281345691|gb|EFB21275.1| hypothetical protein PANDA_019324 [Ailuropoda melanoleuca]
Length = 381
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 177/358 (49%), Positives = 237/358 (66%), Gaps = 5/358 (1%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL+ +V E LY F + R+CRD RS LGY YVN+ P DA A +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIKNLD IDN+AL F+AFG +LSCKV D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKCIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS---PKFTN 208
NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + + FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTN 200
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V N + + DE LK+IF +G S V++D+ GKS+ FGFV +++ +AA AV L+
Sbjct: 201 VFVKNFGDDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G + N KV YVGRAQK+ ER A+LR +FE+ R+ + G +Y+KNLD++I+DEKLKE
Sbjct: 261 GKSINGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETIDDEKLKE 320
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
FS FG+I+ KVMV + G KG G FS EEAT+A++EMNG+ +G KPL+V + Q
Sbjct: 321 EFSSFGSISRAKVMV-EVGQGKGFGVVCFSSFEEATKAVDEMNGRTVGSKPLHVTLGQ 377
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 146/275 (53%), Gaps = 15/275 (5%)
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKMLNG 178
+ +LD + L F G + ++ D +S GYG+V F A+ A+ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
LIN K + ++ + +R +++ N+++ NL + + + L +F FG I S V
Sbjct: 82 DLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKNLDKCIDNRALFYLFSAFGNILSCKV 137
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ D +G S+ + +V+F S AA A+ +NG N++ YVGR + ER A++R +
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 193
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
++ N+++KN D ++DEKLKE+FS +G S KV+ D G SKG GF +
Sbjct: 194 ------DRATFTNVFVKNFGDDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
E A +A+ +++GK I K LYV AQ+K ER A
Sbjct: 248 THEAAQKAVLDLHGKSINGKVLYVGRAQKKIERLA 282
>gi|397478151|ref|XP_003810419.1| PREDICTED: polyadenylate-binding protein 5-like [Pan paniscus]
Length = 382
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 175/358 (48%), Positives = 240/358 (67%), Gaps = 5/358 (1%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL+ +V E LY F + R+CRD RS LGY YVN+ P DA A +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIKNLD SIDN+AL F+AFG +LSCKV D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS---PKFTN 208
NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + + FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTN 200
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V N+ + + DE LK++F +G S V++D+ GKS+ FGFV +++ +AA AV L+
Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G + + KV YVGRAQK+ ER A+LR +FE+ R+ + G +Y+KNLD++INDEKLKE
Sbjct: 261 GKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKE 320
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
FS FG+I+ KVM+ + G KG G FS EEA++A++EMNG+++G KPL+V + Q
Sbjct: 321 EFSSFGSISRAKVMM-EVGQGKGFGVVCFSSFEEASKAVDEMNGRIVGSKPLHVTLGQ 377
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 148/275 (53%), Gaps = 15/275 (5%)
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKMLNG 178
+ +LD + L F G + ++ D +S GYG+V F A+ A+ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
LIN K + ++ + +R +++ N+++ NL +++ + L +F FG I S V
Sbjct: 82 DLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ D +G S+ + +V+F S AA A+ +NG N++ YVGR + ER A++R +
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 193
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
++ N+++KN+ D I+DEKLKELF E+G S KV+ D G SKG GF +
Sbjct: 194 ------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
E A +A+ +++GK I K LYV AQ+K ER A
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLA 282
>gi|301787589|ref|XP_002929210.1| PREDICTED: polyadenylate-binding protein 5-like [Ailuropoda
melanoleuca]
Length = 382
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 177/358 (49%), Positives = 237/358 (66%), Gaps = 5/358 (1%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL+ +V E LY F + R+CRD RS LGY YVN+ P DA A +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIKNLD IDN+AL F+AFG +LSCKV D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKCIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS---PKFTN 208
NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + + FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTN 200
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V N + + DE LK+IF +G S V++D+ GKS+ FGFV +++ +AA AV L+
Sbjct: 201 VFVKNFGDDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G + N KV YVGRAQK+ ER A+LR +FE+ R+ + G +Y+KNLD++I+DEKLKE
Sbjct: 261 GKSINGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETIDDEKLKE 320
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
FS FG+I+ KVMV + G KG G FS EEAT+A++EMNG+ +G KPL+V + Q
Sbjct: 321 EFSSFGSISRAKVMV-EVGQGKGFGVVCFSSFEEATKAVDEMNGRTVGSKPLHVTLGQ 377
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 146/275 (53%), Gaps = 15/275 (5%)
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKMLNG 178
+ +LD + L F G + ++ D +S GYG+V F A+ A+ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
LIN K + ++ + +R +++ N+++ NL + + + L +F FG I S V
Sbjct: 82 DLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKNLDKCIDNRALFYLFSAFGNILSCKV 137
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ D +G S+ + +V+F S AA A+ +NG N++ YVGR + ER A++R +
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 193
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
++ N+++KN D ++DEKLKE+FS +G S KV+ D G SKG GF +
Sbjct: 194 ------DRATFTNVFVKNFGDDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
E A +A+ +++GK I K LYV AQ+K ER A
Sbjct: 248 THEAAQKAVLDLHGKSINGKVLYVGRAQKKIERLA 282
>gi|300796236|ref|NP_001179218.1| polyadenylate-binding protein 5 [Bos taurus]
gi|296471041|tpg|DAA13156.1| TPA: poly(A) binding protein, cytoplasmic 5 [Bos taurus]
gi|440903676|gb|ELR54310.1| Polyadenylate-binding protein 5 [Bos grunniens mutus]
Length = 382
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 176/358 (49%), Positives = 238/358 (66%), Gaps = 5/358 (1%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL+ +V E LY F + R+CRD RS LGY YVN+ P DA A +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIKNLD SIDN+AL F+AFG++LSCKV D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGIGNIFIKNLDKSIDNRALFYLFSAFGSILSCKVVCDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ---NVSPKFTN 208
NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDKATFTN 200
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V N + + D+ LK++F +G S V++DS GKS+ FGFV +++ +AA AV L+
Sbjct: 201 VFVKNFGDDMDDDKLKELFSEYGPTESVKVIRDSSGKSKGFGFVRYETHEAAQKAVLDLH 260
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G + + KV YVGRAQK+ ER A+LR +FE+ R+ + G +Y+KNLD++I+DEKLKE
Sbjct: 261 GKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETIDDEKLKE 320
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
FS FG+I+ KVMV + G KG G FS EEAT+A++EMNG+++G KPL V + Q
Sbjct: 321 EFSSFGSISRAKVMV-EVGQGKGFGVICFSSFEEATKAVDEMNGRIVGSKPLQVTLGQ 377
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 149/275 (54%), Gaps = 15/275 (5%)
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKMLNG 178
+ +LD + L F G + ++ D +S GYG+V F A+ A+ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
LIN K + ++ + +R +++ N+++ NL +++ + L +F FG+I S V
Sbjct: 82 DLINGKPFRL-MWSQPDDRLRKS---GIGNIFIKNLDKSIDNRALFYLFSAFGSILSCKV 137
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ D +G S+ + +V+F S AA A+ +NG N++ YVGR + ER A++R +
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 193
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
+K N+++KN D ++D+KLKELFSE+G S KV+ D G SKG GF +
Sbjct: 194 ------DKATFTNVFVKNFGDDMDDDKLKELFSEYGPTESVKVIRDSSGKSKGFGFVRYE 247
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
E A +A+ +++GK I K LYV AQ+K ER A
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLA 282
>gi|357440279|ref|XP_003590417.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355479465|gb|AES60668.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 591
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 163/362 (45%), Positives = 234/362 (64%), Gaps = 5/362 (1%)
Query: 13 VTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYA 72
+T + AVP+ +LYVGDL +V ++QLY FS+ ++S RVC+D + SL Y
Sbjct: 1 MTDSEKDAVPASPA-ATLYVGDLHSDVTDAQLYKAFSEFNTLISARVCKDSATGKSLCYG 59
Query: 73 YVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKAL 132
YVN S+ Q+A A E N +NGK IR+M+ RD RKSG GNVF+KNL SIDN L
Sbjct: 60 YVNLSSHQEAIRAIELKNHSSLNGKVIRVMWLSRDADARKSGKGNVFVKNLAASIDNVGL 119
Query: 133 CDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFV 192
D F +G +LS K+A +G+SKG+G++QF++EE+A AI+ +NG + DKQ+YVG F+
Sbjct: 120 HDLFQKYGNILSSKIARSEDGKSKGFGYIQFDSEESANVAIQKMNGSTVRDKQIYVGKFI 179
Query: 193 RRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFV 252
R+ ER+ ++ KFTN+YV NL VT++ L + F FG I S + KD +G+S+ FGFV
Sbjct: 180 RKSERSLPDLDAKFTNLYVKNLDPVVTEKHLGEKFSSFGKIVSLAIKKDENGQSKGFGFV 239
Query: 253 NFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANL 312
N+ SPD A A+E ++G+ K+ YV RAQK+ ERE L F ++ + K G+N+
Sbjct: 240 NYDSPDDARRAMEAMDGSQFGSKILYVARAQKKVEREQILHHLFVEKGL----KHMGSNI 295
Query: 313 YLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNG 372
Y+KN+D S+ DE+L++ FS G + S KVM D G SKG GF FS EA ++++ NG
Sbjct: 296 YVKNIDTSVGDEELRDHFSACGEVLSAKVMRDDKGTSKGFGFVCFSTVVEAFKSMSCFNG 355
Query: 373 KM 374
++
Sbjct: 356 EL 357
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 163/286 (56%), Gaps = 19/286 (6%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKML 176
+++ +L + + + L F+ F T++S +V DS G+S YG+V + + A AI++
Sbjct: 17 LYVGDLHSDVTDAQLYKAFSEFNTLISARVCKDSATGKSLCYGYVNLSSHQEAIRAIELK 76
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSA 236
N +N K + V +++ R A+++ NV+V NLA ++ + L +F +G I S+
Sbjct: 77 NHSSLNGKVIRV-MWLSRDADARKSGK---GNVFVKNLAASIDNVGLHDLFQKYGNILSS 132
Query: 237 IVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREA-DLRAK 295
+ + DGKS+ FG++ F S ++A A++K+NG+T DK YVG+ +++ER DL AK
Sbjct: 133 KIARSEDGKSKGFGYIQFDSEESANVAIQKMNGSTVRDKQIYVGKFIRKSERSLPDLDAK 192
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
F NLY+KNLD + ++ L E FS FG I S + D++G SKG GF
Sbjct: 193 F-------------TNLYVKNLDPVVTEKHLGEKFSSFGKIVSLAIKKDENGQSKGFGFV 239
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ 401
+ P++A RA+ M+G G K LYVA AQ+K ER+ L F +
Sbjct: 240 NYDSPDDARRAMEAMDGSQFGSKILYVARAQKKVEREQILHHLFVE 285
>gi|444732647|gb|ELW72929.1| Polyadenylate-binding protein 5 [Tupaia chinensis]
Length = 382
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 175/358 (48%), Positives = 239/358 (66%), Gaps = 5/358 (1%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL+ +V E LY F + R+CRD RS LGY YVN+ P DA A +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIKNLD SIDN+AL F+AFG +LSCKV D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS---PKFTN 208
NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + + FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTN 200
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V N + + DE LK++F +G S V++D+ GKS+ FGFV +++ +AA AV L+
Sbjct: 201 VFVKNFGDDMDDEKLKELFSEYGPTESVKVIRDAGGKSKGFGFVRYETHEAAQKAVLDLH 260
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G + + KV YVGRAQK+ ER A+LR +FE+ R+ + G +Y+KNLD++I+DEKLKE
Sbjct: 261 GKSMDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETIDDEKLKE 320
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
FS FG+I+ KVM+ + G KG G FS EEAT+A++EMNG+++G KPL+V + Q
Sbjct: 321 EFSSFGSISRAKVMM-EVGQGKGFGVVCFSSFEEATKAVDEMNGRVVGSKPLHVTLGQ 377
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 148/275 (53%), Gaps = 15/275 (5%)
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKMLNG 178
+ +LD + L F G + ++ D +S GYG+V F A+ A+ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
LIN K + ++ + +R +++ N+++ NL +++ + L +F FG I S V
Sbjct: 82 DLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ D +G S+ + +V+F S AA A+ +NG N++ YVGR + ER A++R +
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 193
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
++ N+++KN D ++DEKLKELFSE+G S KV+ D G SKG GF +
Sbjct: 194 ------DRATFTNVFVKNFGDDMDDEKLKELFSEYGPTESVKVIRDAGGKSKGFGFVRYE 247
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
E A +A+ +++GK + K LYV AQ+K ER A
Sbjct: 248 THEAAQKAVLDLHGKSMDGKVLYVGRAQKKIERLA 282
>gi|74008013|ref|XP_549122.2| PREDICTED: polyadenylate-binding protein 5 [Canis lupus familiaris]
Length = 382
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 177/358 (49%), Positives = 237/358 (66%), Gaps = 5/358 (1%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL+ +V E LY F + R+CRD RS LGY YVN+ P DA A +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIKNLD SIDN+AL F+AFG +LSCKV D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS---PKFTN 208
NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + + FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTN 200
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V N + DE LK+IF +G S V++D+ GKS+ FGFV +++ +AA AV L+
Sbjct: 201 VFVKNFGNDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G + N KV YVGRAQK+ ER A+LR +FE+ R+ + G +Y+KNLD++I+DEKLKE
Sbjct: 261 GKSINGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETIDDEKLKE 320
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
FS FG+I+ KVMV + G KG G FS E+AT+A++EMNG+ +G KPL+V + Q
Sbjct: 321 EFSSFGSISRAKVMV-EVGQGKGFGVVCFSSFEDATKAVDEMNGRTVGSKPLHVTLGQ 377
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 147/275 (53%), Gaps = 15/275 (5%)
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKMLNG 178
+ +LD + L F G + ++ D +S GYG+V F A+ A+ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
LIN K + ++ + +R +++ N+++ NL +++ + L +F FG I S V
Sbjct: 82 DLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ D +G S+ + +V+F S AA A+ +NG N++ YVGR + ER A++R +
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 193
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
++ N+++KN + ++DEKLKE+FS +G S KV+ D G SKG GF +
Sbjct: 194 ------DRATFTNVFVKNFGNDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
E A +A+ +++GK I K LYV AQ+K ER A
Sbjct: 248 THEAAQKAVLDLHGKSINGKVLYVGRAQKKIERLA 282
>gi|395506976|ref|XP_003757804.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 594
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 202/499 (40%), Positives = 278/499 (55%), Gaps = 53/499 (10%)
Query: 145 CKVAI--DSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
C+VA+ D NG S+G+GFV FE +EAA AI +NGML+ND++V+VG F RQER +
Sbjct: 111 CRVAVVCDENG-SRGFGFVHFETQEAANQAISTMNGMLLNDRKVFVGHFKSRQEREAELG 169
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +FTN+YV N E V D+ L+++F FG S VM D +G SR FGFVNF+ + A
Sbjct: 170 ARALEFTNIYVKNFEEDVDDQCLEELFSEFGKTLSVKVMVDENGHSRGFGFVNFEKHEEA 229
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
AV +NG +V YVGRAQKR ER+ +L+ +FEQ + R + +G NLY+KNLDD
Sbjct: 230 QKAVNSMNGKALGGRVLYVGRAQKRTERQGELKRRFEQMKQERVNRYQGVNLYVKNLDDV 289
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
I+DEKL++ FS +G ITS KVM + G SKG GF FS PEEAT+A+ EMNG+++ KPL
Sbjct: 290 IDDEKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPL 348
Query: 381 YVAVAQRKEERKARLQAQFAQ-------IRAPGGMSPLASGIPGYHHGAPRLGPQQLYYG 433
YVA+AQRKEERKA L Q+ Q I P P +P R +Y
Sbjct: 349 YVALAQRKEERKAILTNQYMQRISVLRNINGPVFPQPTNYFLPAIPQSPTRAS----FY- 403
Query: 434 QGTPGLMPPQAAGYGFQQQVFPGLRPG------GPNYIMPYHLQRQVHPGQRTG----VR 483
+P M P +RP P + + + P + T VR
Sbjct: 404 --SPSTMAP--------------IRPAPRWTSYSPRSLCAFVVFLPATPRRSTSNISTVR 447
Query: 484 RSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVP 543
++ P R N G + + G S +P S MP R V
Sbjct: 448 QASTQVPRAGPHMQRVVNIGTQTMG---TGCPGSPGQAIPQYKYSSAMPNAHQVMERAVH 504
Query: 544 V----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHL 599
+ P++ S LASA P ++ +MLG++LYPL+ + A K+TGMLLE+D +E+L +
Sbjct: 505 IQGQEPLT--ASMLASAPPQEQKQMLGDRLYPLIYGVHAQLAGKITGMLLEIDNSELLLM 562
Query: 600 IESPEALKTKVAEAMAVLQ 618
+ESPE+L +K+ EA+A LQ
Sbjct: 563 LESPESLHSKIEEAVAALQ 581
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 145/270 (53%), Gaps = 25/270 (9%)
Query: 59 VCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMY----SHRDPSI--RK 112
VC + R G+ +V++ + A A +N M +N + + + + R+ + R
Sbjct: 116 VCDENGSR---GFGFVHFETQEAANQAISTMNGMLLNDRKVFVGHFKSRQEREAELGARA 172
Query: 113 SGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNA 172
+ N+++KN + +D++ L + F+ FG LS KV +D NG S+G+GFV FE E AQ A
Sbjct: 173 LEFTNIYVKNFEEDVDDQCLEELFSEFGKTLSVKVMVDENGHSRGFGFVNFEKHEEAQKA 232
Query: 173 IKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF-------------TNVYVNNLAETVT 219
+ +NG + + +YVG +R ER Q + +F N+YV NL + +
Sbjct: 233 VNSMNGKALGGRVLYVGRAQKRTER-QGELKRRFEQMKQERVNRYQGVNLYVKNLDDVID 291
Query: 220 DEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYV 279
DE L+K F +G ITSA VM + G S+ FGFV F SP+ A AV ++NG + K YV
Sbjct: 292 DEKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYV 350
Query: 280 GRAQKRAEREADLRAKFEQERISRYEKLKG 309
AQ++ ER+A L ++ Q RIS + G
Sbjct: 351 ALAQRKEERKAILTNQYMQ-RISVLRNING 379
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 110/172 (63%), Gaps = 11/172 (6%)
Query: 232 TITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
T+ V+ D +G SR FGFV+F++ +AA A+ +NG ND+ +VG + R EREA+
Sbjct: 109 TLCRVAVVCDENG-SRGFGFVHFETQEAANQAISTMNGMLLNDRKVFVGHFKSRQEREAE 167
Query: 292 LRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKG 351
L A+ L+ N+Y+KN ++ ++D+ L+ELFSEFG S KVMVD++G S+G
Sbjct: 168 LGAR----------ALEFTNIYVKNFEEDVDDQCLEELFSEFGKTLSVKVMVDENGHSRG 217
Query: 352 SGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
GF F EEA +A+N MNGK +G + LYV AQ++ ER+ L+ +F Q++
Sbjct: 218 FGFVNFEKHEEAQKAVNSMNGKALGGRVLYVGRAQKRTERQGELKRRFEQMK 269
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 101/189 (53%), Gaps = 24/189 (12%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++YV + E++V++ L +LFS+ + +SV+V D++ S G+ +VN+ ++A A
Sbjct: 176 TNIYVKNFEEDVDDQCLEELFSEFGKTLSVKVMVDENGHSR-GFGFVNFEKHEEAQKAVN 234
Query: 88 ALNFMPINGKPIRIMYSHR-------------------DPSIRKSGYGNVFIKNLDTSID 128
++N + G R++Y R + + N+++KNLD ID
Sbjct: 235 SMNGKALGG---RVLYVGRAQKRTERQGELKRRFEQMKQERVNRYQGVNLYVKNLDDVID 291
Query: 129 NKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYV 188
++ L F+ +G + S KV + G SKG+GFV F + E A A+ +NG +++ K +YV
Sbjct: 292 DEKLRKEFSPYGVITSAKV-MTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYV 350
Query: 189 GLFVRRQER 197
L R++ER
Sbjct: 351 ALAQRKEER 359
>gi|291407988|ref|XP_002720199.1| PREDICTED: poly(A) binding protein, cytoplasmic 5 [Oryctolagus
cuniculus]
Length = 382
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 175/358 (48%), Positives = 239/358 (66%), Gaps = 5/358 (1%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL+ +V E LY F + R+CRD RS LGY YVN+ P DA A +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIKNLD SIDN+AL F+AFG +LSCKV D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVSDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS---PKFTN 208
+G SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + + FTN
Sbjct: 142 HG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTN 200
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V N + + DE LK++F +G S V++D+ GKS+ FGFV +++ +AA AV L+
Sbjct: 201 VFVKNFGDDMDDEKLKELFSEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G + + KV YVGRAQK+ ER A+LR +FE+ R+ + G +Y+KNLD+SI+DEKLKE
Sbjct: 261 GKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDESISDEKLKE 320
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
FS FG+I+ KVM++ G KG G FS EEAT+A++EMNG+++G KPL+V + Q
Sbjct: 321 EFSSFGSISRAKVMMEV-GHGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 147/275 (53%), Gaps = 15/275 (5%)
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKMLNG 178
+ +LD + L F G + ++ D +S GYG+V F A+ A+ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
LIN K + ++ + +R +++ N+++ NL +++ + L +F FG I S V
Sbjct: 82 DLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ D G S+ + +V+F S AA A+ +NG N++ YVGR + ER A++R +
Sbjct: 138 VSDDHG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 193
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
++ N+++KN D ++DEKLKELFSE+G S KV+ D G SKG GF +
Sbjct: 194 ------DRATFTNVFVKNFGDDMDDEKLKELFSEYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
E A +A+ +++GK I K LYV AQ+K ER A
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLA 282
>gi|339899318|ref|XP_001469326.2| putative polyadenylate-binding protein 1 [Leishmania infantum
JPCM5]
gi|398023903|ref|XP_003865113.1| polyadenylate-binding protein 1, putative [Leishmania donovani]
gi|321398770|emb|CAM72432.2| putative polyadenylate-binding protein 1 [Leishmania infantum
JPCM5]
gi|322503349|emb|CBZ38434.1| polyadenylate-binding protein 1, putative [Leishmania donovani]
Length = 560
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/382 (44%), Positives = 235/382 (61%), Gaps = 18/382 (4%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
S+YVGDL+ +NE QL +LF +++VRVCRD + SLGY YVN+ N A A E+
Sbjct: 26 SIYVGDLDAAINEPQLVELFKPFGTILNVRVCRDIITQRSLGYGYVNFDNHDSAEKAIES 85
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF + K +R+M+ RDP++R SG GNVF+KNL+ +D+K+L D F FG++LSCKV
Sbjct: 86 MNFKRVGDKCVRLMWQQRDPALRYSGNGNVFVKNLEKDVDSKSLHDIFTKFGSILSCKVM 145
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLI----NDKQVYVGLFVRRQERAQQNVSP 204
D G+S+GYGFV F++E +A++AI +NG + K +YV F+RR R V+
Sbjct: 146 QDEEGKSRGYGFVHFKDETSAKDAIVKMNGAADHASEDKKALYVANFIRRNARLAALVA- 204
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTNVY+ + TV E ++K F FG ITSA KD G R F F NF+ D A AV
Sbjct: 205 NFTNVYIKQVLPTVNKEVIEKFFAKFGGITSAAACKDKSG--RVFAFCNFEKHDDAVKAV 262
Query: 265 E-----KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDD 319
E ++G T + YV RAQ R+ER LR K+ Q ++ L G NLY++N D
Sbjct: 263 EAMHDHHIDGITAPGEKLYVQRAQPRSERLIALRQKYMQ-----HQSL-GNNLYVRNFDP 316
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
L ELF E+G + SC+VMV + G S+G GF +FS +EA AL EMNG+M+ KP
Sbjct: 317 EFTGADLLELFKEYGEVKSCRVMVSESGASRGFGFVSFSNADEANAALREMNGRMLNGKP 376
Query: 380 LYVAVAQRKEERKARLQAQFAQ 401
L V +AQR+++R L+ QF Q
Sbjct: 377 LIVNIAQRRDQRYTMLRLQFQQ 398
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 525 PFEVSGMPATPVETPRPVPV--PISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHA 581
P V + ATP +P VP P+ +T L S SP ++ LG++L+ V I P A
Sbjct: 459 PSAVGFVQATPKHSPGDVPETPPLPPITPQELESMSPQEQRAALGDRLFLKVYEIAPELA 518
Query: 582 SKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
K+TGM LEM E L+ + L+ +V EA+ VL+
Sbjct: 519 PKITGMFLEMKPKEAYELLNDQKRLEERVTEALCVLK 555
>gi|389595349|ref|XP_003722897.1| polyadenylate-binding protein 1 [Leishmania major strain Friedlin]
gi|323364125|emb|CBZ13132.1| polyadenylate-binding protein 1 [Leishmania major strain Friedlin]
Length = 560
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 169/382 (44%), Positives = 233/382 (60%), Gaps = 18/382 (4%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
S+YVGDL+ +NE QL +LF +++VRVCRD + SLGY YVN+ N A A E+
Sbjct: 26 SIYVGDLDATINEPQLVELFKPFGTILNVRVCRDIITQRSLGYGYVNFDNHDSAEKAIES 85
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF + K +R+M+ RDP++R SG GNVF+KNL+ +D+K+L D F FG++LSCKV
Sbjct: 86 MNFKRVGDKCVRLMWQQRDPALRYSGNGNVFVKNLEKDVDSKSLHDIFTKFGSILSCKVM 145
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLI----NDKQVYVGLFVRRQERAQQNVSP 204
D G+S+GYGFV F++E +A++AI +NG + K +YV F+RR R V+
Sbjct: 146 QDEEGKSRGYGFVHFKDETSAKDAIVKMNGAADHASEDKKALYVANFIRRNARLAALVA- 204
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTNVY+ + TV + ++K F FG ITSA KD G R F F NF+ D A AV
Sbjct: 205 NFTNVYIKQVLPTVNKDVIEKFFAKFGGITSAAACKDKSG--RVFAFCNFEKHDDAVKAV 262
Query: 265 E-----KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDD 319
E ++G T + YV RAQ R+ER LR K+ Q + G NLY++N D
Sbjct: 263 EAMHDHHIDGITAPGEKLYVQRAQPRSERLIALRQKYMQHQAL------GNNLYVRNFDP 316
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
L ELF E+G + SC+VMV + G S+G GF +FS +EA AL EMNG+M+ KP
Sbjct: 317 EFTGADLLELFKEYGEVKSCRVMVSESGVSRGFGFVSFSNADEANAALREMNGRMLNGKP 376
Query: 380 LYVAVAQRKEERKARLQAQFAQ 401
L V +AQR+++R L+ QF Q
Sbjct: 377 LIVNIAQRRDQRYTMLRLQFQQ 398
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 525 PFEVSGMPATPVETPRPVPV--PISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHA 581
P V + ATP +P VP P+ +T L S SP ++ LG++L+ V I P A
Sbjct: 459 PSAVGFVQATPKHSPGDVPETPPLPPITPQELESMSPQEQRAALGDRLFLKVYEIAPELA 518
Query: 582 SKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
K+TGM LEM E L+ + L+ +V EA+ VL+
Sbjct: 519 PKITGMFLEMKPKEAYELLNDQKRLEERVTEALCVLK 555
>gi|426257905|ref|XP_004022562.1| PREDICTED: polyadenylate-binding protein 5-like [Ovis aries]
Length = 382
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 175/359 (48%), Positives = 240/359 (66%), Gaps = 7/359 (1%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL+ +V E LY F + R+CRD RS LGY YVN+ P DA A +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIKNLD SIDN+AL F+AFG++LSCKV D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGIGNIFIKNLDKSIDNRALFYLFSAFGSILSCKVVCDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS---PKFTN 208
NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + + FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTN 200
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V N + + D+ LK++F +G S V++D+ GKS+ FGFV +++ +AA AV L+
Sbjct: 201 VFVKNFGDDMDDDKLKELFSEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G + + KV YVGRAQK+ ER A+LR +FE+ R+ + G +Y+KNLD++I+DEKLKE
Sbjct: 261 GKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKTRPPGVPIYIKNLDETIDDEKLKE 320
Query: 329 LFSEFGTITSCKVMVD-QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
FS FG+I+ KVMV+ + G KG G FS EEAT+A++EMNG+++G KPL V + Q
Sbjct: 321 EFSSFGSISRAKVMVEVEQG--KGFGVVCFSSFEEATKAVDEMNGRIVGSKPLQVTLGQ 377
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 149/275 (54%), Gaps = 15/275 (5%)
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKMLNG 178
+ +LD + L F G + ++ D +S GYG+V F A+ A+ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
LIN K + ++ + +R +++ N+++ NL +++ + L +F FG+I S V
Sbjct: 82 DLINGKPFRL-MWSQPDDRLRKS---GIGNIFIKNLDKSIDNRALFYLFSAFGSILSCKV 137
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ D +G S+ + +V+F S AA A+ +NG N++ YVGR + ER A++R +
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 193
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
++ N+++KN D ++D+KLKELFSE+G S KV+ D G SKG GF +
Sbjct: 194 ------DRATFTNVFVKNFGDDMDDDKLKELFSEYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
E A +A+ +++GK I K LYV AQ+K ER A
Sbjct: 248 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLA 282
>gi|6019464|gb|AAC64372.2| polyadenylate-binding protein 1 [Leishmania major]
Length = 560
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 168/382 (43%), Positives = 233/382 (60%), Gaps = 18/382 (4%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
S+YVGDL+ +NE QL +LF +++VRVCRD + SLGY YVN+ N A A E+
Sbjct: 26 SIYVGDLDATINEPQLVELFKPFGTILNVRVCRDIITQRSLGYGYVNFDNHDSAEKAIES 85
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF + K +R+M+ RDP++R SG GNVF+KNL+ +D+K+L D F FG++LSCKV
Sbjct: 86 MNFKRVGDKCVRLMWQQRDPALRYSGNGNVFVKNLEKDVDSKSLHDIFTKFGSILSCKVM 145
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLI----NDKQVYVGLFVRRQERAQQNVSP 204
D G+S+GYGFV F++E +A++AI +NG + K +YV F+RR R V+
Sbjct: 146 QDEEGKSRGYGFVHFKDETSAKDAIVKMNGAADHASEDKKALYVANFIRRNARLAALVA- 204
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTNVY+ + TV + ++K F FG ITSA KD G R F F NF+ D A AV
Sbjct: 205 NFTNVYIKQVLPTVNKDVIEKFFAKFGGITSAAACKDKSG--RVFAFCNFEKHDDAVKAV 262
Query: 265 E-----KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDD 319
E ++G T + YV RAQ R+ER LR K+ Q + G NLY++N D
Sbjct: 263 EAMHDHHIDGITAPGEKLYVQRAQPRSERLIALRQKYMQHQAL------GNNLYVRNFDP 316
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
L ELF E+G + SC+VMV + G S+G GF +FS +EA AL EMNG+M+ KP
Sbjct: 317 EFTGADLLELFKEYGEVKSCRVMVSESGVSRGFGFVSFSNADEANAALREMNGRMLNGKP 376
Query: 380 LYVAVAQRKEERKARLQAQFAQ 401
L V +AQR+++R ++ QF Q
Sbjct: 377 LIVNIAQRRDQRYTIVRLQFQQ 398
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 525 PFEVSGMPATPVETPRPVPV--PISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHA 581
P V + ATP +P VP P+ +T L S SP ++ LG++L+ V I P A
Sbjct: 459 PSAVGFVQATPKHSPGDVPETPPLPPITPQELESMSPQEQRAALGDRLFLKVYEIPPDVA 518
Query: 582 SKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
K+TGM LEM E L+ + L+ +V EA+ VL+
Sbjct: 519 PKITGMFLEMKPKEAYELLNDQKRLEERVTEALCVLK 555
>gi|389603137|ref|XP_001568596.2| putative polyadenylate-binding protein 1 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505742|emb|CAM43715.2| putative polyadenylate-binding protein 1 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 554
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 170/382 (44%), Positives = 234/382 (61%), Gaps = 18/382 (4%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
S+YVGDL+ +NE QL +LF +++VRVCRD + SLGY YVN+ N A A E+
Sbjct: 26 SIYVGDLDAAINEPQLVELFKPFGTILNVRVCRDIITQRSLGYGYVNFDNHHSAERAIES 85
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF + K +R+M+ RDPS+R SG GNVF+KNL+ +D+K+L D F FG++LSCKV
Sbjct: 86 MNFRRVGDKCVRLMWQQRDPSLRYSGNGNVFVKNLEKDVDSKSLHDIFTKFGSILSCKVM 145
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLI----NDKQVYVGLFVRRQERAQQNVSP 204
D G+S+GYGFV F++E +A++AI +NG + K +YV F+RR R V+
Sbjct: 146 EDEEGKSRGYGFVHFKDEISAKDAIVKMNGAADHASEDKKALYVANFIRRNARLAALVA- 204
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTNVY+ + TV E ++ F FG ITSA KD G R F F NF+ D A AV
Sbjct: 205 NFTNVYIKQVLPTVNKEVIENFFAKFGGITSAAACKDKSG--RVFAFCNFEKHDDAVKAV 262
Query: 265 E-----KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDD 319
E ++G T + YV RAQ R+ER LR K+ Q ++ L G NLY++N D
Sbjct: 263 EAMHDHHIDGITAPGEKLYVQRAQPRSERLIALRQKYMQ-----HQSL-GNNLYVRNFDP 316
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
L ELF E+G + SC+VM+ + G S+G GF +FS +EA AL EMNG+M+ KP
Sbjct: 317 EFTGADLLELFKEYGDVKSCRVMMSESGASRGFGFVSFSNADEANAALREMNGRMLNGKP 376
Query: 380 LYVAVAQRKEERKARLQAQFAQ 401
L V +AQR+++R L+ QF Q
Sbjct: 377 LIVNIAQRRDQRYTMLRLQFQQ 398
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-SDGKSRCFGFVNFQSPDAAAAA 263
+ ++YV +L + + L ++F FGTI + V +D +S +G+VNF + +A A
Sbjct: 23 QIASIYVGDLDAAINEPQLVELFKPFGTILNVRVCRDIITQRSLGYGYVNFDNHHSAERA 82
Query: 264 VEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIND 323
+E +N DK + Q R+ LR N+++KNL+ ++
Sbjct: 83 IESMNFRRVGDKCVRLMWQQ----RDPSLRYS------------GNGNVFVKNLEKDVDS 126
Query: 324 EKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI----GRKP 379
+ L ++F++FG+I SCKVM D+ G S+G GF F A A+ +MNG +K
Sbjct: 127 KSLHDIFTKFGSILSCKVMEDEEGKSRGYGFVHFKDEISAKDAIVKMNGAADHASEDKKA 186
Query: 380 LYVAVAQRKEERKARLQAQFAQI 402
LYVA R+ R A L A F +
Sbjct: 187 LYVANFIRRNARLAALVANFTNV 209
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 525 PFEVSGMPATPVETPRPVPV--PISTLT-SALASASPDDRTRMLGEQLYPLVENIEPVHA 581
P V + ATP +P VP P+ +T L S SP ++ LG++L+ V I P A
Sbjct: 453 PSAVGFVQATPKHSPGQVPETPPLPPITPQELESMSPQEQRAALGDRLFLKVYEIAPELA 512
Query: 582 SKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
K+TGM LEM+ E L+ + L+ +V EA+ VL+
Sbjct: 513 PKITGMFLEMNPKEAYELLNDQKRLEERVTEALCVLK 549
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 307 LKGANLYLKNLDDSINDEKLKELFSEFGTITS---CKVMVDQHGFSKGSGFAAFSMPEEA 363
++ A++Y+ +LD +IN+ +L ELF FGTI + C+ ++ Q S G G+ F A
Sbjct: 22 MQIASIYVGDLDAAINEPQLVELFKPFGTILNVRVCRDIITQR--SLGYGYVNFDNHHSA 79
Query: 364 TRALNEMNGKMIGRKPLYVAVAQR 387
RA+ MN + +G K + + QR
Sbjct: 80 ERAIESMNFRRVGDKCVRLMWQQR 103
>gi|323305308|gb|EGA59055.1| Pab1p [Saccharomyces cerevisiae FostersB]
gi|323333819|gb|EGA75210.1| Pab1p [Saccharomyces cerevisiae AWRI796]
Length = 466
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 155/299 (51%), Positives = 210/299 (70%), Gaps = 2/299 (0%)
Query: 102 MYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFV 161
M+S RDPS+RK G GN+FIKNL IDNKAL DTF+ FG +LS K+A D NG+SKG+GFV
Sbjct: 1 MWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFV 60
Query: 162 QFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVT 219
FE E AA+ AI LNGML+N +++YV + R+ER Q +TN+YV N+ T
Sbjct: 61 HFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETT 120
Query: 220 DEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYV 279
DE +++F FG I SA + KD+DGK + FGFVN++ + A AVE LN + N + YV
Sbjct: 121 DEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYV 180
Query: 280 GRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSC 339
GRAQK+ ER L+ ++E R+ + K +G NL++KNLDDS++DEKL+E F+ +GTITS
Sbjct: 181 GRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSA 240
Query: 340 KVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQ 398
KVM ++G SKG GF FS PEEAT+A+ E N +++ KPLYVA+AQRK+ R+++L Q
Sbjct: 241 KVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQ 299
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 165/299 (55%), Gaps = 19/299 (6%)
Query: 26 GNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANA 85
G+ ++++ +L +++ LYD FS ++S ++ D++ +S G+ +V++ A A
Sbjct: 13 GSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSK-GFGFVHFEEEGAAKEA 71
Query: 86 KEALNFMPINGKPI----RIMYSHRDPSIR--KSGYGNVFIKNLDTSIDNKALCDTFAAF 139
+ALN M +NG+ I + RD + K+ Y N+++KN+++ ++ + FA F
Sbjct: 72 IDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKF 131
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA- 198
G ++S + D++G+ KG+GFV +E E A A++ LN +N +++YVG ++ ER
Sbjct: 132 GPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMH 191
Query: 199 -----------QQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSR 247
++ + N++V NL ++V DE L++ F +GTITSA VM+ +GKS+
Sbjct: 192 VLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSK 251
Query: 248 CFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK 306
FGFV F +P+ A A+ + N K YV AQ++ R + L + + RY++
Sbjct: 252 GFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQARNQMRYQQ 310
>gi|431922856|gb|ELK19640.1| Polyadenylate-binding protein 5 [Pteropus alecto]
Length = 373
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 174/355 (49%), Positives = 235/355 (66%), Gaps = 8/355 (2%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL+ +V E LY F + R+CRD RS LGY YVN+ P DA A +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIKNLD SIDN+AL F+AFG +LSCKV D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYV 211
NG SKGY +V F++ AA AI +NG+ +N++QVY VR ++RA FTNV+V
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYRAAEVRTRDRAT------FTNVFV 194
Query: 212 NNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTT 271
N + + DE LK IF +G S V++D+ GKS+ FGFV +++ +AA AV L+G +
Sbjct: 195 KNFGDDMDDEKLKDIFSEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKS 254
Query: 272 NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFS 331
+ KV YVGRAQK+ ER A+LR +FE+ R+ + G +Y+KNLD++I+DEKLKE FS
Sbjct: 255 IDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPVYIKNLDETIDDEKLKEEFS 314
Query: 332 EFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
FG+I+ KVMV + G KG G +S EEAT+A++EMNG+++G KPL+V + Q
Sbjct: 315 SFGSISRAKVMV-EVGQGKGFGVVCYSSFEEATKAVDEMNGRIMGSKPLHVTLGQ 368
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 143/275 (52%), Gaps = 24/275 (8%)
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKMLNG 178
+ +LD + L F G + ++ D +S GYG+V F A+ A+ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
LIN K + ++ + +R +++ N+++ NL +++ + L +F FG I S V
Sbjct: 82 DLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ D +G S+ + +V+F S AA A+ +NG N++ Y R A++R +
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVY---------RAAEVRTR--- 184
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
++ N+++KN D ++DEKLK++FSE+G S KV+ D G SKG GF +
Sbjct: 185 ------DRATFTNVFVKNFGDDMDDEKLKDIFSEYGPTESVKVIRDASGKSKGFGFVRYE 238
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
E A +A+ +++GK I K LYV AQ+K ER A
Sbjct: 239 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLA 273
>gi|348570452|ref|XP_003471011.1| PREDICTED: polyadenylate-binding protein 5-like [Cavia porcellus]
Length = 382
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 173/358 (48%), Positives = 235/358 (65%), Gaps = 5/358 (1%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL+ V E LY F + R+CRD S LGY YVN+ P DA A +NF
Sbjct: 22 VGDLDPEVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIKNLD SIDN++L F+AFG +LSCKV D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRSLFYLFSAFGNILSCKVVCDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ---NVSPKFTN 208
NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVQLNNRQVYVGRFKFPEERAAEVRTRDKATFTN 200
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V NL + + DE LK +F +G S +++D+ GKS+ FGFV +++ DAA AV L+
Sbjct: 201 VFVKNLGDDMDDEKLKTLFSEYGQTESVKLVRDASGKSKGFGFVRYETHDAAQKAVLDLH 260
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G + + KV YVGRAQK+ ER A+LR +FE+ R+ + G +Y+KNLD++I++EKLKE
Sbjct: 261 GKSVDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETIDEEKLKE 320
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
FS FG+I+ KVM+ + G KG G FS EEAT+A+ EMNG+++G KPL+V + Q
Sbjct: 321 EFSAFGSISRAKVMM-EVGQGKGFGVICFSSFEEATKAVEEMNGRLVGSKPLHVTLGQ 377
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 153/282 (54%), Gaps = 24/282 (8%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ ++ +L+++++ L+ LFS ++S +V D + S GYAYV++ + A
Sbjct: 103 SGVGNI--FIKNLDKSIDNRSLFYLFSAFGNILSCKVVCDDN--GSKGYAYVHFDSLAAA 158
Query: 83 ANAKEALNFMPINGKPIRI----MYSHRDPSIR---KSGYGNVFIKNLDTSIDNKALCDT 135
A +N + +N + + + R +R K+ + NVF+KNL +D++ L
Sbjct: 159 NRAIWHMNGVQLNNRQVYVGRFKFPEERAAEVRTRDKATFTNVFVKNLGDDMDDEKLKTL 218
Query: 136 FAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ 195
F+ +G S K+ D++G+SKG+GFV++E +AAQ A+ L+G ++ K +YVG ++
Sbjct: 219 FSEYGQTESVKLVRDASGKSKGFGFVRYETHDAAQKAVLDLHGKSVDGKVLYVGRAQKKI 278
Query: 196 ER------------AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
ER ++ P +Y+ NL ET+ +E LK+ F FG+I+ A VM +
Sbjct: 279 ERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETIDEEKLKEEFSAFGSISRAKVMMEV- 337
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
G+ + FG + F S + A AVE++NG K +V Q R
Sbjct: 338 GQGKGFGVICFSSFEEATKAVEEMNGRLVGSKPLHVTLGQVR 379
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 147/275 (53%), Gaps = 15/275 (5%)
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKMLNG 178
+ +LD + L F G + ++ D S GYG+V F A+ A+ +N
Sbjct: 22 VGDLDPEVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
LIN K + ++ + +R +++ N+++ NL +++ + L +F FG I S V
Sbjct: 82 DLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKNLDKSIDNRSLFYLFSAFGNILSCKV 137
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ D +G S+ + +V+F S AA A+ +NG N++ YVGR + ER A++R +
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVQLNNRQVYVGRFKFPEERAAEVRTR--- 193
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
+K N+++KNL D ++DEKLK LFSE+G S K++ D G SKG GF +
Sbjct: 194 ------DKATFTNVFVKNLGDDMDDEKLKTLFSEYGQTESVKLVRDASGKSKGFGFVRYE 247
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
+ A +A+ +++GK + K LYV AQ+K ER A
Sbjct: 248 THDAAQKAVLDLHGKSVDGKVLYVGRAQKKIERLA 282
>gi|365760982|gb|EHN02660.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 466
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 155/299 (51%), Positives = 210/299 (70%), Gaps = 2/299 (0%)
Query: 102 MYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFV 161
M+S RDPS+RK G GN+FIKNL IDNKAL DTF+ FG +LS K+A D NG+SKG+GFV
Sbjct: 1 MWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFV 60
Query: 162 QFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVT 219
FE E AA+ AI LNGML+N +++YV + R+ER Q +TN+YV N+ T
Sbjct: 61 HFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETT 120
Query: 220 DEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYV 279
DE + +F FG I SA + KD+DGK + FGFVN+++ + A AVE LN + N + YV
Sbjct: 121 DEQFQDLFIQFGPIVSASLEKDADGKLKGFGFVNYENHEDAVKAVEALNESDLNGEKLYV 180
Query: 280 GRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSC 339
GRAQK+ ER L+ ++E R+ + K +G NL++KNLDDS++DEKL+E F+ +GTITS
Sbjct: 181 GRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFTPYGTITSA 240
Query: 340 KVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQ 398
KVM ++G SKG GF FS PEEAT+A+ E N +++ KPLYVA+AQRK+ R+++L Q
Sbjct: 241 KVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQ 299
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 165/299 (55%), Gaps = 19/299 (6%)
Query: 26 GNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANA 85
G+ ++++ +L +++ LYD FS ++S ++ D++ +S G+ +V++ A A
Sbjct: 13 GSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSK-GFGFVHFEEEGAAKEA 71
Query: 86 KEALNFMPINGKPI----RIMYSHRDPSIR--KSGYGNVFIKNLDTSIDNKALCDTFAAF 139
+ALN M +NG+ I + RD + K+ Y N+++KN+++ ++ D F F
Sbjct: 72 IDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQDLFIQF 131
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA- 198
G ++S + D++G+ KG+GFV +EN E A A++ LN +N +++YVG ++ ER
Sbjct: 132 GPIVSASLEKDADGKLKGFGFVNYENHEDAVKAVEALNESDLNGEKLYVGRAQKKNERMH 191
Query: 199 -----------QQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSR 247
++ + N++V NL ++V DE L++ F +GTITSA VM+ +GKS+
Sbjct: 192 VLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFTPYGTITSAKVMRTENGKSK 251
Query: 248 CFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK 306
FGFV F +P+ A A+ + N K YV AQ++ R + L + + RY++
Sbjct: 252 GFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQARNQMRYQQ 310
>gi|395856984|ref|XP_003800896.1| PREDICTED: polyadenylate-binding protein 5 [Otolemur garnettii]
Length = 382
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 172/358 (48%), Positives = 237/358 (66%), Gaps = 5/358 (1%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL+ +V E LY F + R+CRD S LGY YVN+ P DA A +NF
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
+NGKP R+M+S D +RKSG GN+FIKNLD SIDN+AL F+AFG +LSCKV D
Sbjct: 82 DLLNGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS---PKFTN 208
NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +ERA + + FTN
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTN 200
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V+V NL + + DE LK++F +G S V++D+ GKS+ FGFV +++ +AA AV L+
Sbjct: 201 VFVKNLGDDMDDEKLKELFSEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLH 260
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G + + K+ YVGRAQK+ ER A+LR +FE+ R+ + G +Y+KNLD++I+DEKLKE
Sbjct: 261 GKSIDGKILYVGRAQKKIERLAELRRRFERLRLKDKSRPPGVPIYIKNLDETIDDEKLKE 320
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
FS FG+I+ KVM+ + G KG G FS EEA +A++EMNG+ +G KPL+V + Q
Sbjct: 321 EFSPFGSISRAKVMM-EVGQGKGFGVVCFSSFEEAAKAVDEMNGRTVGSKPLHVTLGQ 377
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 148/275 (53%), Gaps = 15/275 (5%)
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSK-GYGFVQFENEEAAQNAIKMLNG 178
+ +LD + L F G + ++ D S GYG+V F A+ A+ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
L+N K + ++ + +R +++ N+++ NL +++ + L +F FG I S V
Sbjct: 82 DLLNGKPFRL-MWSQPDDRLRKS---GVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ D +G S+ + +V+F S AA A+ +NG N++ YVGR + ER A++R +
Sbjct: 138 VCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR--- 193
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
++ N+++KNL D ++DEKLKELFSE+G S KV+ D G SKG GF +
Sbjct: 194 ------DRATFTNVFVKNLGDDMDDEKLKELFSEYGPTESVKVIRDASGKSKGFGFVRYE 247
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
E A +A+ +++GK I K LYV AQ+K ER A
Sbjct: 248 THEAAQKAVLDLHGKSIDGKILYVGRAQKKIERLA 282
>gi|402590718|gb|EJW84648.1| polyadenylate-binding protein 4, partial [Wuchereria bancrofti]
Length = 519
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 206/517 (39%), Positives = 289/517 (55%), Gaps = 52/517 (10%)
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSP 204
VA D SKGYGFV FE EE+AQ AI+ +NGML+ K+VYVG F R R ++ +
Sbjct: 1 VANDEESNSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGKFQPRTARLREMGETAR 60
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
+FTNVY+ N A+ + E L+K+F FG ITSA VM D+DGKS+ FGFV F++P+ A AV
Sbjct: 61 RFTNVYIKNFADELDKEALEKLFSKFGKITSAAVMVDADGKSKGFGFVAFENPEDAEKAV 120
Query: 265 EKLNGTT--NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
+++ ++ YV RAQK+ ER A+L+ ++EQ+++ R ++ +G NLY+KNLDD++N
Sbjct: 121 TEMHEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVN 180
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
D+ LK+ F +G ITS KVM D +G SKG GF F P+EAT+A+ EMNGKM+ KPLYV
Sbjct: 181 DDILKQNFEAYGKITSAKVMCDDNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYV 240
Query: 383 AVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLG---------------P 427
A+AQRKE+RKA+L +Q+ Q A M S +PG + P G P
Sbjct: 241 ALAQRKEDRKAQLASQYMQRLASIRMHNAGS-MPGTVY-TPGTGGFFVSSTLQNQRAFMP 298
Query: 428 QQLYYGQGTPGLMPPQ-----AAGYGFQQQVF-----------PGLRPGGPNYIMPYHLQ 471
G G P AAG+G Q G RP + + Q
Sbjct: 299 TATIPGAQMRGTTPRWNTIGAAAGFGVQSPYMVQSGGYGQAGRGGTRPAASSAAVAMRAQ 358
Query: 472 R-QVHPGQRTGVRRSGNTHQ-------MQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVP 523
+ Q PGQ TGV R G Q M Q Q R+ G R + Q + S
Sbjct: 359 QGQYGPGQ-TGVTRGGPQAQRLTAGGAMVQNQGTRSQQMGGRQTQPGKPNQGQMMYSSYS 417
Query: 524 VPFEVSGMPATPVETPRPVPVPISTLTSA--LASASPDDRTRMLGEQLYPLVENI-EPVH 580
++G P + + +A LA A P ++ +MLGE++YPL+E I +
Sbjct: 418 A---ITGRPGQVQSQQNSIVIQGQEPLTAHMLAQALPQEQKQMLGERIYPLIERIYQGPD 474
Query: 581 ASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVL 617
K+TGM+LEMD +E+L ++E+ E L++KV+EA +VL
Sbjct: 475 VGKITGMMLEMDNSELLMMLENEELLQSKVSEAASVL 511
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 144/252 (57%), Gaps = 20/252 (7%)
Query: 67 SSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRI-MYSHRDPSIRKSG-----YGNVFI 120
+S GY +V++ + A A E +N M + GK + + + R +R+ G + NV+I
Sbjct: 8 NSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGKFQPRTARLREMGETARRFTNVYI 67
Query: 121 KNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGML 180
KN +D +AL F+ FG + S V +D++G+SKG+GFV FEN E A+ A+ ++
Sbjct: 68 KNFADELDKEALEKLFSKFGKITSAAVMVDADGKSKGFGFVAFENPEDAEKAVTEMHEYE 127
Query: 181 I--NDKQVYVGLFVRRQERA--------QQNVSP----KFTNVYVNNLAETVTDEDLKKI 226
+ ++++YV ++ ER+ QQ V + N+YV NL +TV D+ LK+
Sbjct: 128 LPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVNDDILKQN 187
Query: 227 FGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRA 286
F +G ITSA VM D +G+S+ FGFV F+ PD A AV ++NG K YV AQ++
Sbjct: 188 FEAYGKITSAKVMCDDNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVALAQRKE 247
Query: 287 EREADLRAKFEQ 298
+R+A L +++ Q
Sbjct: 248 DRKAQLASQYMQ 259
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 23/196 (11%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + +++ L LFS+ ++ S V D +S G+ +V + NP+DA A
Sbjct: 63 TNVYIKNFADELDKEALEKLFSKFGKITSAAVMVDADGKSK-GFGFVAFENPEDAEKAVT 121
Query: 88 ALNFMPINGKPIRIMYSHR--------------------DPSIRKSGYGNVFIKNLDTSI 127
++ + G R +Y R + R G N+++KNLD ++
Sbjct: 122 EMHEYELPGTE-RKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGV-NLYVKNLDDTV 179
Query: 128 DNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVY 187
++ L F A+G + S KV D NG+SKG+GFV FE + A A+ +NG ++ K +Y
Sbjct: 180 NDDILKQNFEAYGKITSAKVMCDDNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLY 239
Query: 188 VGLFVRRQERAQQNVS 203
V L R+++R Q S
Sbjct: 240 VALAQRKEDRKAQLAS 255
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LYV +L+ VN+ L F ++ S +V D + RS G+ +V + P +A
Sbjct: 165 YQGVNLYVKNLDDTVNDDILKQNFEAYGKITSAKVMCDDNGRSK-GFGFVCFEKPDEATK 223
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
A +N + KP+ + + R RK+ + +++ L
Sbjct: 224 AVTEMNGKMMCTKPLYVALAQRKED-RKAQLASQYMQRL 261
>gi|71745214|ref|XP_827237.1| polyadenylate-binding protein 1 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70831402|gb|EAN76907.1| polyadenylate-binding protein 1, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|261331451|emb|CBH14445.1| PABP1 [Trypanosoma brucei gambiense DAL972]
Length = 566
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 167/376 (44%), Positives = 231/376 (61%), Gaps = 26/376 (6%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL+ +NE QL D+F +++VRVCRD + SLGY YVNY + A+ A E
Sbjct: 22 SLYVGDLDPAINEPQLVDIFKPYGTILNVRVCRDIITQRSLGYGYVNYDDVNSASKAMEE 81
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF + K IRIM+ RDP++R SG GN+F+KNL +D++ L F FG +LSCKV
Sbjct: 82 LNFKRVGEKCIRIMWQQRDPALRYSGSGNIFVKNLKEEVDSRELSLIFKKFGEILSCKVM 141
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQ--------VYVGLFVRRQERAQQ 200
D +G+S+GYGFV F++++AA+ AI+ +NG DK+ +YV F+RR R
Sbjct: 142 DDESGKSRGYGFVHFKDDDAAKAAIEKMNG----DKEHADADKAALYVANFIRRNARLAA 197
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
V+ FTNVY+ L TV + ++K F FG ITSA + KD +G R F F NF+ D A
Sbjct: 198 LVA-NFTNVYIKQLLPTVDKDVIEKFFSKFGGITSAAICKDKNG--RAFAFCNFEKHDDA 254
Query: 261 AAAVE-----KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLK 315
A+E ++ G T + YV RAQ R+ER LR K+ Q + L G NLY++
Sbjct: 255 VKAIEASHDQEVEGVTQPGEKLYVQRAQPRSERLIALRQKYMQ-----CQSL-GNNLYVR 308
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI 375
N D ++ L ELF E+G I SC+VM D +G S+G GF +F ++A AL EMNG+M+
Sbjct: 309 NFDAEFTEKDLNELFKEYGVIRSCRVMTDANGISRGFGFVSFENADQANAALREMNGRML 368
Query: 376 GRKPLYVAVAQRKEER 391
KPL V +AQR+++R
Sbjct: 369 NGKPLVVNIAQRRDQR 384
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 524 VPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASK 583
VP PA +TP P+P PIS L S D++ LG++LY V + P HA K
Sbjct: 470 VPRTPQASPAIAPDTP-PLP-PISA--EDLQQMSVDEQRAALGDRLYIKVHELAPDHAPK 525
Query: 584 VTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAA 622
+TGM LEM+ E L L+ +P+ + KV EA+ VL+ A+
Sbjct: 526 ITGMFLEMNPKEALALLSNPKLMHEKVTEALCVLKVHAS 564
>gi|395856757|ref|XP_003800785.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Otolemur garnettii]
Length = 359
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 171/384 (44%), Positives = 232/384 (60%), Gaps = 34/384 (8%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
V Y SLYVGDL +V E L+ FS V V+S+R+CRD R SLGYAYVN+
Sbjct: 3 VAPKYRMASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLA 62
Query: 81 DAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
DA A + +NF +NGK IR+M+S RD +R+SG GNV
Sbjct: 63 DAQKALDTMNFDVVNGKSIRLMWSQRDAYLRRSGIGNVMS-------------------- 102
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
D G SKGY FV F+N+ AA AI+ +NG + D +V+VG F R++R +
Sbjct: 103 ---------DDQG-SKGYAFVHFQNQSAADRAIEEMNGRQLKDCKVFVGRFKNRKDREAE 152
Query: 201 --NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
N + +FTNVY+ N E + DE LK++F +G S VM DS GKS+ FGFV+F + +
Sbjct: 153 LRNKAGEFTNVYIKNFGEDMDDEKLKEVFSKYGRTLSVKVMTDSSGKSKGFGFVSFDNHE 212
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
AA AV+++NG N ++ +VGRAQK+ ER+A+L+ FEQ + R +G LY+KNLD
Sbjct: 213 AAKKAVKEMNGKDINGQLIFVGRAQKKVERQAELKQMFEQLKKERIHGCQGVKLYIKNLD 272
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
D+I+DEKL++ FS FG+I+ KVM + G SKG G FS EEAT+A+ EMNG ++G K
Sbjct: 273 DTIDDEKLRKEFSSFGSISRVKVM-QEGGQSKGFGLICFSSLEEATKAMTEMNGHILGSK 331
Query: 379 PLYVAVAQRK-EERKARLQAQFAQ 401
PL +A+A R ERK L Q+ Q
Sbjct: 332 PLSIALAHRHYXERKIYLTRQYLQ 355
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 144/288 (50%), Gaps = 45/288 (15%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L F+ G VLS ++ D +S GY +V F AQ A+
Sbjct: 11 SLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDT 70
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N ++N K + R +Q++ + + +
Sbjct: 71 MNFDVVNGKSI-------RLMWSQRDAYLRRSGI-------------------------- 97
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
VM D G S+ + FV+FQ+ AA A+E++NG D +VGR + R +REA+LR K
Sbjct: 98 GNVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGRQLKDCKVFVGRFKNRKDREAELRNK 156
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ N+Y+KN + ++DEKLKE+FS++G S KVM D G SKG GF
Sbjct: 157 AGE----------FTNVYIKNFGEDMDDEKLKEVFSKYGRTLSVKVMTDSSGKSKGFGFV 206
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+F E A +A+ EMNGK I + ++V AQ+K ER+A L+ F Q++
Sbjct: 207 SFDNHEAAKKAVKEMNGKDINGQLIFVGRAQKKVERQAELKQMFEQLK 254
>gi|194386842|dbj|BAG59787.1| unnamed protein product [Homo sapiens]
Length = 350
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 170/346 (49%), Positives = 232/346 (67%), Gaps = 5/346 (1%)
Query: 44 LYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMY 103
LY F + R+CRD RS LGY YVN+ P DA A +NF INGKP R+M+
Sbjct: 2 LYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMW 61
Query: 104 SHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQF 163
S D +RKSG GN+FIKNLD SIDN+AL F+AFG +LSCKV D NG SKGY +V F
Sbjct: 62 SQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHF 120
Query: 164 ENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS---PKFTNVYVNNLAETVTD 220
++ AA AI +NG+ +N++QVYVG F +ERA + + FTNV+V N+ + + D
Sbjct: 121 DSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDD 180
Query: 221 EDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVG 280
E LK++F +G S V++D+ GKS+ FGFV +++ +AA AV L+G + + KV YVG
Sbjct: 181 EKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVG 240
Query: 281 RAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCK 340
RAQK+ ER A+LR +FE+ R+ + G +Y+KNLD++INDEKLKE FS FG+I+ K
Sbjct: 241 RAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAK 300
Query: 341 VMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
VM++ G KG G FS EEAT+A++EMNG+++G KPL+V + Q
Sbjct: 301 VMMEV-GQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 345
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 134/237 (56%), Gaps = 14/237 (5%)
Query: 157 GYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAE 216
GYG+V F A+ A+ +N LIN K + ++ + +R +++ N+++ NL +
Sbjct: 28 GYGYVNFRFPADAEWALNTMNFDLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKNLDK 83
Query: 217 TVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKV 276
++ + L +F FG I S V+ D +G S+ + +V+F S AA A+ +NG N++
Sbjct: 84 SIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQ 142
Query: 277 WYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTI 336
YVGR + ER A++R + ++ N+++KN+ D I+DEKLKELF E+G
Sbjct: 143 VYVGRFKFPEERAAEVRTR---------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPT 193
Query: 337 TSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
S KV+ D G SKG GF + E A +A+ +++GK I K LYV AQ+K ER A
Sbjct: 194 ESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLA 250
>gi|71659594|ref|XP_821518.1| polyadenylate-binding protein 1 [Trypanosoma cruzi strain CL
Brener]
gi|70886900|gb|EAN99667.1| polyadenylate-binding protein 1, putative [Trypanosoma cruzi]
Length = 570
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 176/424 (41%), Positives = 243/424 (57%), Gaps = 21/424 (4%)
Query: 8 AATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRS 67
AAT + T SLYVGDL+ V E L +LF +++VRVCRD +
Sbjct: 9 AATQEEITPTVPVTTKALQVASLYVGDLDPVVTEPHLVELFKPFGTILNVRVCRDIITQR 68
Query: 68 SLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSI 127
SLGY YVN+++ AA A EALNF + K +RIM+ RDP++R SG GN+F+KNL +
Sbjct: 69 SLGYGYVNFNSHDSAAKAMEALNFKRVGDKCMRIMWQQRDPTLRYSGNGNIFVKNLKNEV 128
Query: 128 DNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQ-- 185
D++ L F FG +LSCKV D G+S+GYGFV F+N+ AA+ AI+ +NG + +
Sbjct: 129 DSRELSVIFKKFGDILSCKVMEDEEGKSRGYGFVHFKNDNAAKEAIENMNGEKDHADEEK 188
Query: 186 ---VYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
+YV F+RR R V+ FTNVY+ + TV E ++K F FG ITS+ KD
Sbjct: 189 KMGLYVANFIRRNARLATLVA-NFTNVYIKQVLPTVDKEVIEKFFSKFGGITSSATCKDK 247
Query: 243 DGKSRCFGFVNFQSPDAAAAAVEK-----LNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
+G R F F NF+ + A A+E ++G + YV RAQ R+ER LR K+
Sbjct: 248 NG--RVFAFCNFEKHEDAVKAIEASHEQFVDGVVPPGEKLYVQRAQPRSERLIALRQKYM 305
Query: 298 QERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAF 357
Q + G NLY++N D +E L ELF E+G I SC+VM D +G S+G GF +F
Sbjct: 306 QCQTL------GNNLYVRNFDPEFTEENLHELFKEYGVIRSCRVMTDANGNSRGFGFVSF 359
Query: 358 SMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPG 417
++A AL EMNG+M+ KPL V +AQR+++R L+ QF Q R M + S +P
Sbjct: 360 ENADQANAALREMNGRMLNGKPLIVNIAQRRDQRFMMLRLQFQQ-RLQAMMRRMHS-MPF 417
Query: 418 YHHG 421
HG
Sbjct: 418 VSHG 421
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 526 FEVSGMPATPVETPRPVP------VPISTLTSA-LASASPDDRTRMLGEQLYPLVENIEP 578
F M P TP+P P P+ +T+ L S S D++ LG++LY V I P
Sbjct: 465 FATPSMAFAPPRTPQPSPGVAPDTPPLPPITAEDLRSMSVDEQRAALGDRLYIKVFEIAP 524
Query: 579 VHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
HA K+TGM LEMD E L+ + L+ KV EA+ VL+
Sbjct: 525 DHAPKITGMFLEMDLKEAFTLLTNQRLLQEKVIEALCVLK 564
>gi|407408437|gb|EKF31876.1| poly(A)-binding protein, putative,polyadenylate-binding protein,
putative [Trypanosoma cruzi marinkellei]
Length = 569
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 178/427 (41%), Positives = 242/427 (56%), Gaps = 29/427 (6%)
Query: 9 ATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSS 68
AT + T SLYVGDL+ V E L +LF +++VRVCRD + S
Sbjct: 3 ATQEEITPTVPVTTKALQVASLYVGDLDPIVTEPHLVELFKPFGTILNVRVCRDIITQRS 62
Query: 69 LGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSID 128
LGY Y+N++N AA A EALNF + K +RIM+ RDP++R SG GNVF+KNL +D
Sbjct: 63 LGYGYINFNNHDSAAKAMEALNFKRVGDKCMRIMWQQRDPALRYSGNGNVFVKNLKNEVD 122
Query: 129 NKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQ--- 185
++ L F FG +LSCKV D G+S+GYGFV F+N+ AA+ AI+ +NG DK
Sbjct: 123 SRELGAIFKKFGDILSCKVMEDEEGKSRGYGFVHFKNDNAAKEAIENMNG----DKDHAD 178
Query: 186 ------VYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVM 239
+YV F+RR R V+ FTNVY+ + TV E ++K F FG ITS+
Sbjct: 179 EEKKMGLYVANFIRRNARLATLVA-NFTNVYIKQVLPTVDKEVIEKFFSRFGGITSSATC 237
Query: 240 KDSDGKSRCFGFVNFQSPDAAAAAVEK-----LNGTTNNDKVWYVGRAQKRAEREADLRA 294
KD +G R F F NF+ + A A+E ++G + YV RAQ R+ER LR
Sbjct: 238 KDKNG--RVFAFCNFEKHEDAVKAIEASHEQFVDGVVPPGEKLYVQRAQPRSERLIALRQ 295
Query: 295 KFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGF 354
K+ Q + G NLY++N D +E L ELF E+G I SC+VM D +G S+G GF
Sbjct: 296 KYMQCQTL------GNNLYVRNFDPEFTEENLHELFKEYGVIRSCRVMTDANGNSRGFGF 349
Query: 355 AAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASG 414
+F ++A AL EMNG+M+ KPL V +AQR+++R L+ QF Q R M + S
Sbjct: 350 VSFGNADQANAALREMNGRMLNGKPLIVNIAQRRDQRFMMLRLQFQQ-RLQAMMRRMHS- 407
Query: 415 IPGYHHG 421
+P HG
Sbjct: 408 MPFVSHG 414
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 526 FEVSGMPATPVETPRPVP------VPISTLTSA-LASASPDDRTRMLGEQLYPLVENIEP 578
F M TP+P P P+ +T+ L + S D++ LG++LY V I P
Sbjct: 464 FATPSMAFASQRTPQPSPGVAPDTPPLPPITAEDLRTMSVDEQRAALGDRLYIKVFEIAP 523
Query: 579 VHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
HA K+TGM LEMD E L+ + L+ KV EA+ VL+
Sbjct: 524 DHAPKITGMFLEMDLKEAFTLLNNQRLLQEKVIEALCVLK 563
>gi|29841435|gb|AAP06467.1| similar to GenBank Accession Number AJ298278 poly(A) binding
protein in Rattus norvegicus [Schistosoma japonicum]
Length = 307
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 151/296 (51%), Positives = 198/296 (66%), Gaps = 5/296 (1%)
Query: 12 AVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGY 71
AVT A+ G N SLYVGDL V++S L FS++ V+S RVCRD + R SLGY
Sbjct: 2 AVTVAS-----QGLMNSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRQSLGY 56
Query: 72 AYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
YVN+ +P+ A A E LN+ P+ G+PIRIM+S RDPS+RKSG GN+FIKNLD SI+ K
Sbjct: 57 GYVNFEDPKHAEQALEVLNYEPLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKE 116
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L DTF+ FG +LSCK+ +D NGQSKGYGFV FE EE A+ AI+ +N M+I D+ VYVG F
Sbjct: 117 LYDTFSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGKF 176
Query: 192 VRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGF 251
+ + ER Q KF N+YV N +E LK++F FG I SA VMKD++GKS+ FGF
Sbjct: 177 IPKTERKSQARKVKFNNLYVKNFPPETDNEKLKEMFSEFGEIKSACVMKDNEGKSKGFGF 236
Query: 252 VNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKL 307
V + PD A AV ++G +V Y RAQ++ ER+ +L+ K E++R R +L
Sbjct: 237 VCYLDPDHAENAVRTMHGKEIEGRVLYCARAQRKEERQEELKQKIEKQRAERQSRL 292
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 165/294 (56%), Gaps = 27/294 (9%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + + AL F+ G VLS +V D + QS GYG+V FE+ + A+ A+++
Sbjct: 14 SLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRQSLGYGYVNFEDPKHAEQALEV 73
Query: 176 LNGMLINDKQVYVGLFVR--RQERAQQNVSPKFT---NVYVNNLAETVTDEDLKKIFGHF 230
LN Y L R R +Q++ S + + N+++ NL +++ ++L F F
Sbjct: 74 LN---------YEPLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFF 124
Query: 231 GTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREA 290
G I S ++ D +G+S+ +GFV+F+ + A A+EK+N D+V YVG+ + ER++
Sbjct: 125 GRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGKFIPKTERKS 184
Query: 291 DLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSK 350
R K+K NLY+KN ++EKLKE+FSEFG I S VM D G SK
Sbjct: 185 QAR------------KVKFNNLYVKNFPPETDNEKLKEMFSEFGEIKSACVMKDNEGKSK 232
Query: 351 GSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRA 404
G GF + P+ A A+ M+GK I + LY A AQRKEER+ L+ + + RA
Sbjct: 233 GFGFVCYLDPDHAENAVRTMHGKEIEGRVLYCARAQRKEERQEELKQKIEKQRA 286
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 307 LKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGF-SKGSGFAAFSMPEEATR 365
L ++LY+ +L ++D L+ FSE G + S +V D S G G+ F P+ A +
Sbjct: 10 LMNSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRQSLGYGYVNFEDPKHAEQ 69
Query: 366 ALNEMNGKMIGRKPLYVAVAQR 387
AL +N + + +P+ + +QR
Sbjct: 70 ALEVLNYEPLMGRPIRIMWSQR 91
>gi|167527097|ref|XP_001747881.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773630|gb|EDQ87268.1| predicted protein [Monosiga brevicollis MX1]
Length = 553
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/376 (46%), Positives = 238/376 (63%), Gaps = 8/376 (2%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQV-AQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL ++V E++LY+ F+ A V SVRVCRD ++SLGY YVN++ P+DAA E
Sbjct: 30 SLYVGDLSKDVIEAELYNFFNSFGATVQSVRVCRDMVTQTSLGYGYVNFATPEDAAKVYE 89
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
A NF + G+P+RIM+S RDP+ R+SG GN+FIKNL +DNKAL DTF FGTVLSC+V
Sbjct: 90 AANFEELKGQPVRIMFSERDPTKRRSGVGNIFIKNLSAEVDNKALYDTFRVFGTVLSCRV 149
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER--AQQNVSPK 205
D G S+G FVQ+E+ E A+ I +N I DK V V + R++R +
Sbjct: 150 LYDQEGNSRGIAFVQYEDAEVAKQVIAQVNDKKILDKVVKVEAYKPRRQRMLEAEETQKN 209
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
FTNV+ N+A ++DED+ K F +FG I S V+K D R +GFV ++ A AV
Sbjct: 210 FTNVFFKNVAADISDEDIMKEFENFGEIESK-VLKSHDQFGR-YGFVAYKDTADAQKAVS 267
Query: 266 KLNGTT--NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIND 323
+LN + YV RAQ+++ER LR +FE+ R K K ANLY+KN + + +
Sbjct: 268 ELNDKPLGADGTKLYVARAQRKSERMGRLRREFERRRTEMRAKYKDANLYIKNFSEDVTE 327
Query: 324 EKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR-KPLYV 382
++L+++F +GTI S +V+ D+ G S+ GF FS EEATRA+ EMNG+M KPLYV
Sbjct: 328 DELRKMFEAYGTIVSVRVVKDRDGQSRQFGFVLFSSEEEATRAIQEMNGRMTADGKPLYV 387
Query: 383 AVAQRKEERKARLQAQ 398
+ + KEER +Q Q
Sbjct: 388 SRFRNKEERAQEVQRQ 403
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 135/280 (48%), Gaps = 20/280 (7%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFG-TVLSCKVAIDSNGQ-SKGYGFVQFENEEAAQNAI 173
++++ +L + L + F +FG TV S +V D Q S GYG+V F E A
Sbjct: 29 ASLYVGDLSKDVIEAELYNFFNSFGATVQSVRVCRDMVTQTSLGYGYVNFATPEDAAKVY 88
Query: 174 KMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTI 233
+ N + + V + R + + V N+++ NL+ V ++ L F FGT+
Sbjct: 89 EAANFEELKGQPVRIMFSERDPTKRRSGVG----NIFIKNLSAEVDNKALYDTFRVFGTV 144
Query: 234 TSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLR 293
S V+ D +G SR FV ++ + A + ++N DKV V + R +R L
Sbjct: 145 LSCRVLYDQEGNSRGIAFVQYEDAEVAKQVIAQVNDKKILDKVVKVEAYKPRRQRM--LE 202
Query: 294 AKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSG 353
A+ Q+ + N++ KN+ I+DE + + F FG I S KV+ F + G
Sbjct: 203 AEETQKNFT--------NVFFKNVAADISDEDIMKEFENFGEIES-KVLKSHDQFGR-YG 252
Query: 354 FAAFSMPEEATRALNEMNGKMIGRK--PLYVAVAQRKEER 391
F A+ +A +A++E+N K +G LYVA AQRK ER
Sbjct: 253 FVAYKDTADAQKAVSELNDKPLGADGTKLYVARAQRKSER 292
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%)
Query: 561 RTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEA 620
R +LG L+ LV+ +P HA K+TGMLL+ VL +E+P ALK + +A VL E
Sbjct: 487 RNAVLGNPLFSLVQAQQPKHAPKITGMLLDQPDEAVLEYLENPAALKAALDQAYKVLVEQ 546
Query: 621 A 621
A
Sbjct: 547 A 547
>gi|91805911|gb|ABE65684.1| polyadenylate-binding protein [Arabidopsis thaliana]
Length = 267
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 153/255 (60%), Positives = 189/255 (74%), Gaps = 4/255 (1%)
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LN+ + GKP+RIM+S RDPS R SG GNVF+KNLD SIDNK LCD F+AFG VLSCK
Sbjct: 2 EVLNYCKLKGKPMRIMFSERDPSNRMSGRGNVFVKNLDESIDNKQLCDMFSAFGKVLSCK 61
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF 206
VA D++G SKGYGFVQF ++ + A NG LI ++ ++V FV R Q + S F
Sbjct: 62 VARDASGVSKGYGFVQFYSDLSVYTACNFHNGTLIRNQHIHVCPFV---SRGQWDKSRVF 118
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVYV NL ET TD DLK++FG FG ITSA+VMKD +GKSR FGFVNF+ +AA A+EK
Sbjct: 119 TNVYVKNLVETATDADLKRLFGEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEK 178
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKL-KGANLYLKNLDDSINDEK 325
+NG ++K +VGRAQ++ R DL+AKFE E+I R K KG NLY+KNLDDS+++ K
Sbjct: 179 MNGVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNTK 238
Query: 326 LKELFSEFGTITSCK 340
L+ELFSEFGTITSCK
Sbjct: 239 LEELFSEFGTITSCK 253
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 126/234 (53%), Gaps = 29/234 (12%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GNV +V +L+++++ QL D+FS +V+S +V RD S S GY +V + +
Sbjct: 28 SGRGNV--FVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSK-GYGFVQFYSD--- 81
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYG------NVFIKNLDTSIDNKALCDTF 136
+ A NF NG IR + H P + + + NV++KNL + + L F
Sbjct: 82 LSVYTACNFH--NGTLIRNQHIHVCPFVSRGQWDKSRVFTNVYVKNLVETATDADLKRLF 139
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG + S V D G+S+ +GFV FE EAA AI+ +NG+++++K+++VG R+
Sbjct: 140 GEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVVVDEKELHVGRAQRKTN 199
Query: 197 RAQQNVSPKF--------------TNVYVNNLAETVTDEDLKKIFGHFGTITSA 236
R +++ KF N+YV NL ++V + L+++F FGTITS
Sbjct: 200 RT-EDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNTKLEELFSEFGTITSC 252
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 100/192 (52%), Gaps = 15/192 (7%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NV+V NL E++ ++ L +F FG + S V +D+ G S+ +GFV F S + A
Sbjct: 32 NVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSKGYGFVQFYSDLSVYTACNFH 91
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NGT ++ +V R + +++ R+ N+Y+KNL ++ D LK
Sbjct: 92 NGTLIRNQHIHVCPFVSRGQ--------WDKSRVF-------TNVYVKNLVETATDADLK 136
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
LF EFG ITS VM D G S+ GF F E A A+ +MNG ++ K L+V AQR
Sbjct: 137 RLFGEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVVVDEKELHVGRAQR 196
Query: 388 KEERKARLQAQF 399
K R L+A+F
Sbjct: 197 KTNRTEDLKAKF 208
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 22/142 (15%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
++YV +L + ++ L LF + ++ S V +D +S + +VN+ + A A E
Sbjct: 120 NVYVKNLVETATDADLKRLFGEFGEITSAVVMKDGEGKSRR-FGFVNFEKAEAAVTAIEK 178
Query: 89 LNFMPINGKPIRIMYSHR-------------------DPSIRKSGYGNVFIKNLDTSIDN 129
+N + ++ K + + + R D RK N+++KNLD S+DN
Sbjct: 179 MNGVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGM--NLYVKNLDDSVDN 236
Query: 130 KALCDTFAAFGTVLSCKVAIDS 151
L + F+ FGT+ SCK A +S
Sbjct: 237 TKLEELFSEFGTITSCKYACNS 258
>gi|224059164|ref|XP_002299747.1| predicted protein [Populus trichocarpa]
gi|222847005|gb|EEE84552.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 228/356 (64%), Gaps = 6/356 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL+ V E+ L F V + S+R+CR + SL YAYVN + A+ A
Sbjct: 18 SLYVGDLDPEVTETDLRAAFYHVGPISSLRLCRCRLTGKSLCYAYVNLYSHAQASRALGL 77
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LN + GKP+RIM+ RDP RK+G+ N+F+KNLD SI + L F+ +GT+LSCKVA
Sbjct: 78 LNHTNLKGKPMRIMWCQRDPFARKTGFANLFVKNLDFSISSSCLESIFSKYGTILSCKVA 137
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
NG+SKG+GFVQFE++++A A L+ ++ K+++V FV++ ER FTN
Sbjct: 138 -GENGRSKGFGFVQFESQDSALVAQTALHDTMLGGKKLHVCKFVKKTERTAAAPCEVFTN 196
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
+YV NL ET+T++ LK +F G ++S +M D +GKS+ FGFVNF+SPD A AV+ +N
Sbjct: 197 LYVKNLDETITEDGLKDMFSVVGDVSSVAIMMDHEGKSKHFGFVNFKSPDDAKKAVDVMN 256
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G+ K +VG+AQ+++ER L+ +++ EKL+ +NLY+KNL+ I+D+KLKE
Sbjct: 257 GSVIGSKTLFVGKAQRKSERTMILKQEYKDLHNRSTEKLRASNLYVKNLNVDIDDKKLKE 316
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
+FS +G I S KV+ G SK GF F+ PEEA +AL +NG PL+ +V
Sbjct: 317 VFSAYGKILSVKVICHNDGTSKQFGFVCFASPEEANKALVALNG-----HPLFFSV 367
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 151/289 (52%), Gaps = 18/289 (6%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA-IDSNGQSKGYGFVQFENEEAAQNAIK 174
++++ +LD + L F G + S ++ G+S Y +V + A A+
Sbjct: 17 ASLYVGDLDPEVTETDLRAAFYHVGPISSLRLCRCRLTGKSLCYAYVNLYSHAQASRALG 76
Query: 175 MLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTIT 234
+LN + K + + ++ +R A++ F N++V NL +++ L+ IF +GTI
Sbjct: 77 LLNHTNLKGKPMRI-MWCQRDPFARKT---GFANLFVKNLDFSISSSCLESIFSKYGTIL 132
Query: 235 SAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRA 294
S V + +G+S+ FGFV F+S D+A A L+ T K +V + K+ ER A
Sbjct: 133 SCKVAGE-NGRSKGFGFVQFESQDSALVAQTALHDTMLGGKKLHVCKFVKKTERTAAAPC 191
Query: 295 KFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGF 354
+ NLY+KNLD++I ++ LK++FS G ++S +M+D G SK GF
Sbjct: 192 EV------------FTNLYVKNLDETITEDGLKDMFSVVGDVSSVAIMMDHEGKSKHFGF 239
Query: 355 AAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
F P++A +A++ MNG +IG K L+V AQRK ER L+ ++ +
Sbjct: 240 VNFKSPDDAKKAVDVMNGSVIGSKTLFVGKAQRKSERTMILKQEYKDLH 288
>gi|342183460|emb|CCC92940.1| putative polyadenylate-binding protein 1 [Trypanosoma congolense
IL3000]
Length = 552
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 163/372 (43%), Positives = 230/372 (61%), Gaps = 18/372 (4%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL+ ++E QL ++F +++VRVCRD + SLGY YVNY N A A E
Sbjct: 22 SLYVGDLDPAISEPQLVEIFRPYGTILNVRVCRDIITQRSLGYGYVNYDNANSATKAMEE 81
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF + K IRIM+ RDP++R SG GNVF+KNL +D++ L F FG +LSCKV
Sbjct: 82 MNFKRVGEKCIRIMWQQRDPALRYSGNGNVFVKNLKGEVDSRELSLIFKKFGEILSCKVM 141
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGM--LINDKQ--VYVGLFVRRQERAQQNVSP 204
D +G S+GYGFV F+++ AA++AI+ +NG+ ++K+ +YV F+RR R V+
Sbjct: 142 DDESGNSRGYGFVHFKDDNAAKSAIESMNGVTEYADEKKTALYVANFIRRNARLAALVA- 200
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
FTNVY+ + TV ++K F FG ITSA + KD +G R F F NF+ D A A+
Sbjct: 201 NFTNVYIKQILPTVDKAIIEKFFSKFGGITSAAICKDKNG--RAFAFCNFEKHDDAVKAI 258
Query: 265 EKLN-----GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDD 319
E+ + G T + YV RAQ R+ER LR K+ Q + L G NLY++N D
Sbjct: 259 EEFHDHEVEGVTQPGEKLYVQRAQPRSERLIALRQKYMQ-----CQSL-GNNLYVRNFDP 312
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
++ L ELF E+G I SC+VM D +G S+G GF +F ++A AL EM+G+M+ KP
Sbjct: 313 EFTEKDLNELFKEYGVIRSCRVMTDANGVSRGFGFVSFENADQANAALREMSGRMLNGKP 372
Query: 380 LYVAVAQRKEER 391
L V +AQR+++R
Sbjct: 373 LVVNIAQRRDQR 384
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 153/305 (50%), Gaps = 37/305 (12%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQ-SKGYGFVQFENEEAAQNAIK 174
++++ +LD +I L + F +GT+L+ +V D Q S GYG+V ++N +A A++
Sbjct: 21 ASLYVGDLDPAISEPQLVEIFRPYGTILNVRVCRDIITQRSLGYGYVNYDNANSATKAME 80
Query: 175 MLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT---NVYVNNLAETVTDEDLKKIFGHFG 231
+N + +K + + Q++ + +++ NV+V NL V +L IF FG
Sbjct: 81 EMNFKRVGEKCIRIMW-------QQRDPALRYSGNGNVFVKNLKGEVDSRELSLIFKKFG 133
Query: 232 TITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTT----NNDKVWYVGRAQKRAE 287
I S VM D G SR +GFV+F+ +AA +A+E +NG T YV +R
Sbjct: 134 EILSCKVMDDESGNSRGYGFVHFKDDNAAKSAIESMNGVTEYADEKKTALYVANFIRRNA 193
Query: 288 READLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHG 347
R A L A F N+Y+K + +++ +++ FS+FG ITS + D++G
Sbjct: 194 RLAALVANF-------------TNVYIKQILPTVDKAIIEKFFSKFGGITSAAICKDKNG 240
Query: 348 FSKGSGFAAFSMPEEATRALNEMNGKMI------GRKPLYVAVAQRKEERKARLQAQFAQ 401
+ F F ++A +A+ E + + G K LYV AQ + ER L+ ++ Q
Sbjct: 241 --RAFAFCNFEKHDDAVKAIEEFHDHEVEGVTQPGEK-LYVQRAQPRSERLIALRQKYMQ 297
Query: 402 IRAPG 406
++ G
Sbjct: 298 CQSLG 302
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 528 VSGMPATPVETPRPVP--VPISTLTSA-LASASPDDRTRMLGEQLYPLVENIEPVHASKV 584
VS P TP +P P P+ +T+ L + + +++ LG++LY V + P HA K+
Sbjct: 453 VSAAPRTPQASPATAPDTPPLPPITAEDLQNMTMEEQRAALGDRLYIKVYELAPDHAPKI 512
Query: 585 TGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARS 624
TGM LEM+ E L+ + L+ KV EA+ VL+ A+ S
Sbjct: 513 TGMFLEMNPKEAHTLLTNQRLLQDKVTEALCVLKVHASNS 552
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Query: 305 EKLKGANLYLKNLDDSINDEKLKELFSEFGTITS---CKVMVDQHGFSKGSGFAAFSMPE 361
++L+ A+LY+ +LD +I++ +L E+F +GTI + C+ ++ Q S G G+ +
Sbjct: 16 KQLQVASLYVGDLDPAISEPQLVEIFRPYGTILNVRVCRDIITQR--SLGYGYVNYDNAN 73
Query: 362 EATRALNEMNGKMIGRKPLYVAVAQR 387
AT+A+ EMN K +G K + + QR
Sbjct: 74 SATKAMEEMNFKRVGEKCIRIMWQQR 99
>gi|7673357|gb|AAF66824.1|AF190656_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 330
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 182/335 (54%), Positives = 226/335 (67%), Gaps = 27/335 (8%)
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
I+DEKLKELFS +GTITSCKVM D G SKGSGF AFS PEEA+RAL+EMNGKM+ KPL
Sbjct: 1 ISDEKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPEEASRALSEMNGKMVVSKPL 60
Query: 381 YVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLM 440
YVA+AQRKEER+ARLQAQF+Q+R S +A +P Y G P LG QQ++YGQ P ++
Sbjct: 61 YVALAQRKEERRARLQAQFSQMRPIAMASSVAPRMPMYPPGGPGLG-QQIFYGQPQPAML 119
Query: 441 PPQAAGYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNT--HQMQQP- 494
PPQ AG+G+QQQ+ PG+RPGG PN+ MP Q Q QR G RR G Q QQP
Sbjct: 120 PPQ-AGFGYQQQLVPGMRPGGGPMPNFFMPMVQQGQQG--QRPGSRRGGAVPLQQGQQPV 176
Query: 495 ----QFMRNSNQGIRY------LDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPV 544
Q M +G RY D A G + S +P+++ GMP +P+PV
Sbjct: 177 PLMQQQMFPRGRGYRYPPGRGLPDVAFPGVGGGMFS---IPYDMGGMPVRDAGIVQPIPV 233
Query: 545 PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPE 604
L +ALA++SP ++ MLGE LYPLVE +EP A+KVTGMLLEMDQTEVLHL+ESPE
Sbjct: 234 --GALATALANSSPTEQRTMLGENLYPLVEQLEPETAAKVTGMLLEMDQTEVLHLLESPE 291
Query: 605 ALKTKVAEAMAVLQEAAARSDVN--EKLGSLAVNE 637
ALK KVAEAM VL+ + + N ++L SL++N+
Sbjct: 292 ALKAKVAEAMEVLRNVSQQQSSNPADQLASLSLND 326
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%)
Query: 218 VTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVW 277
++DE LK++F +GTITS VM+D G S+ GFV F +P+ A+ A+ ++NG K
Sbjct: 1 ISDEKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPEEASRALSEMNGKMVVSKPL 60
Query: 278 YVGRAQKRAEREADLRAKFEQER 300
YV AQ++ ER A L+A+F Q R
Sbjct: 61 YVALAQRKEERRARLQAQFSQMR 83
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%)
Query: 127 IDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQV 186
I ++ L + F+ +GT+ SCKV D +G SKG GFV F N E A A+ +NG ++ K +
Sbjct: 1 ISDEKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPEEASRALSEMNGKMVVSKPL 60
Query: 187 YVGLFVRRQER 197
YV L R++ER
Sbjct: 61 YVALAQRKEER 71
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 39 VNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKP 98
+++ +L +LFS + S +V RD S S G +V +SNP++A+ A +N + KP
Sbjct: 1 ISDEKLKELFSPYGTITSCKVMRDPSGVSK-GSGFVAFSNPEEASRALSEMNGKMVVSKP 59
Query: 99 IRIMYSHR 106
+ + + R
Sbjct: 60 LYVALAQR 67
>gi|307207781|gb|EFN85399.1| Polyadenylate-binding protein 1 [Harpegnathos saltator]
Length = 552
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 150/303 (49%), Positives = 195/303 (64%), Gaps = 30/303 (9%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL ++ E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I G+PIRIM+S RDPS+RKSG GNVFIKNLD +IDNKA+ DTF+AFG +LS
Sbjct: 68 ALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ---- 200
CKVA D +G SKGYGFV FE EEAA +I +NGML+N K+VYVG F+ R+ER ++
Sbjct: 128 CKVAQDESGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEK 187
Query: 201 ------------NVSPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+ KF N+YV NL +T+ DE L+K F FGTITS
Sbjct: 188 AKLFTNVYVKNFELKRKFEQLKIERLNRYQGVNLYVKNLDDTIDDERLRKEFTPFGTITS 247
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
A VM + +G+S+ FGFV F P+ A AV ++NG K YV AQ++ +R+A L ++
Sbjct: 248 AKVMME-EGRSKGFGFVCFSQPEEATKAVTEMNGRIVGSKPLYVALAQRKEDRKAHLASQ 306
Query: 296 FEQ 298
+ Q
Sbjct: 307 YMQ 309
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 197/562 (35%), Positives = 285/562 (50%), Gaps = 82/562 (14%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIK 174
++++ +L T I L + F++ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 11 ASLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 175 MLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTIT 234
+N +I + + + R + V NV++ NL + + ++ + F FG I
Sbjct: 71 TMNFDMIKGRPIRIMWSQRDPSLRKSGVG----NVFIKNLDKNIDNKAMYDTFSAFGNIL 126
Query: 235 SAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADL-- 292
S V +D G S+ +GFV+F++ +AA +++K+NG N K YVG+ R ERE +L
Sbjct: 127 SCKVAQDESGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGKFIPRKEREKELGE 186
Query: 293 ---------------RAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTIT 337
+ KFEQ +I R + +G NLY+KNLDD+I+DE+L++ F+ FGTIT
Sbjct: 187 KAKLFTNVYVKNFELKRKFEQLKIERLNRYQGVNLYVKNLDDTIDDERLRKEFTPFGTIT 246
Query: 338 SCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQA 397
S KVM+++ G SKG GF FS PEEAT+A+ EMNG+++G KPLYVA+AQRKE+RKA L +
Sbjct: 247 SAKVMMEE-GRSKGFGFVCFSQPEEATKAVTEMNGRIVGSKPLYVALAQRKEDRKAHLAS 305
Query: 398 QFAQIRAPGGMSPLASGI-PGY--HHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVF 454
Q+ Q A M + PG + P L Q +YG P Q A Q +
Sbjct: 306 QYMQRMANVRMQQMGQIFQPGNAGSYFVPTLPQPQRFYG-------PAQMA----QIRAT 354
Query: 455 PGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDN---AR 511
P P PN QV P +TG SG Q R + N AR
Sbjct: 355 PRW-PAQPN---------QVRPNAQTG--SSGFAMQAPFRAAPRAPAAQAGAMRNTLSAR 402
Query: 512 NGTDQSVV--------SMVPVPFEVS------------GMPATPVETPRPVPVPIS---- 547
T Q V SM VS M P P P P+
Sbjct: 403 PITGQQAVGGANMQSRSMAGPAVGVSPQSRPSNYKYTANMRNPPQTMPMPAQAPVQQAVH 462
Query: 548 ------TLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIE 601
S LA+A P ++ +MLGE+L+PL++ + P K+TGMLLE+D +E+LH++E
Sbjct: 463 IQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQCMYPALTGKITGMLLEIDNSELLHMLE 522
Query: 602 SPEALKTKVAEAMAVLQEAAAR 623
E+LK KV EA+AVLQ A+
Sbjct: 523 HSESLKAKVEEAVAVLQAHQAK 544
>gi|70947056|ref|XP_743180.1| polyadenylate-binding protein [Plasmodium chabaudi chabaudi]
gi|56522555|emb|CAH74716.1| polyadenylate-binding protein, putative [Plasmodium chabaudi
chabaudi]
Length = 629
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 136/253 (53%), Positives = 181/253 (71%), Gaps = 4/253 (1%)
Query: 17 TTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNY 76
+T +P + SLYVGDL ++V E+ LY++F+ V V+S+RVCRD R SLGYAYVNY
Sbjct: 5 STNIMPPSFSTASLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRDSVTRKSLGYAYVNY 64
Query: 77 SNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTF 136
N DA A + LN+ I G+P R+M+SHRDPS+RKSG GN+F+KNLD +IDNKAL DTF
Sbjct: 65 HNLADAERALDTLNYTNIKGQPARLMWSHRDPSLRKSGTGNIFVKNLDKTIDNKALFDTF 124
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
+ FG +LSCKVA D G+SK YGFV +E+EE+A+ AI+ +NGM + K VYVG F+++ E
Sbjct: 125 SMFGNILSCKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFIKKSE 184
Query: 197 RAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQS 256
RA + KFTN+YV N +TVT+ LK++F +G ITS IV SD K+R F F+N+
Sbjct: 185 RATNDT--KFTNLYVKNFPDTVTEAHLKELFSPYGEITSMIVK--SDNKNRKFCFINYSD 240
Query: 257 PDAAAAAVEKLNG 269
D+A A+E LNG
Sbjct: 241 ADSARNAMENLNG 253
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 214/436 (49%), Gaps = 39/436 (8%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ +V +L++ ++ L+D FS ++S +V D+ +S Y +V+Y + + A
Sbjct: 101 SGTGNI--FVKNLDKTIDNKALFDTFSMFGNILSCKVATDEFGKSK-NYGFVHYEDEESA 157
Query: 83 ANAKEALNFMPINGKPIRIMY--SHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
A E +N M + K + + + + + + + N+++KN ++ L + F+ +G
Sbjct: 158 KEAIEKVNGMQLGSKNVYVGHFIKKSERATNDTKFTNLYVKNFPDTVTEAHLKELFSPYG 217
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
+ S + + S+ +++ + F+ + + ++A+NA++ LNG I + + ++E A++
Sbjct: 218 EITS--MIVKSDNKNRKFCFINYSDADSARNAMENLNGKKITEDGKIDHNYDPKKEEAEK 275
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD--------------SDGKS 246
+ N A T KK T A +D +D K+
Sbjct: 276 AANENSNNTTSEENAATSETPAEKKTDSESATNKDATTGEDQTSANGTTTTVTSTTDAKT 335
Query: 247 RCFGFVNFQSPDAAAAA---VEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
N + +AA A +K +T + YVG Q RA R A L+AKF+
Sbjct: 336 E--EATNDSTANAATAEKKDSKKSGESTETPNILYVGPHQSRARRHALLKAKFDTLNTES 393
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEA 363
K G NLY+KNLDDS++D+ LKELF +GTITS KVM D SKG GF F EEA
Sbjct: 394 RNKHPGVNLYIKNLDDSMDDQTLKELFEPYGTITSAKVMKDDKDQSKGFGFVCFGTHEEA 453
Query: 364 TRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAP 423
+A+ EM+ K+I KPLYV +A+++E+R +RLQ +F M P+ HH
Sbjct: 454 NKAVTEMHLKIINGKPLYVGLAEKREQRLSRLQQRFR-------MHPIR------HHMNN 500
Query: 424 RLGPQQLYYGQGTPGL 439
L Y TP L
Sbjct: 501 SLNSPMQYPNSQTPQL 516
>gi|68070939|ref|XP_677383.1| polyadenylate-binding protein [Plasmodium berghei strain ANKA]
gi|56497479|emb|CAH95361.1| polyadenylate-binding protein, putative [Plasmodium berghei]
Length = 833
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 141/276 (51%), Positives = 190/276 (68%), Gaps = 6/276 (2%)
Query: 17 TTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNY 76
+T +P + SLYVGDL ++V E+ LY++F+ V V+S+RVCRD R SLGYAYVNY
Sbjct: 5 STNIMPPSFSTASLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRDSVTRKSLGYAYVNY 64
Query: 77 SNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTF 136
N DA A + LN+ I G+P R+M+SHRDPS+RKSG GN+F+KNLD +IDNKAL DTF
Sbjct: 65 HNLADAERALDTLNYTNIKGQPARLMWSHRDPSLRKSGTGNIFVKNLDKTIDNKALFDTF 124
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
+ FG +LSCKVA D G+SK YGFV +E+EE+A+ AI+ +NGM + K VYVG F+++ E
Sbjct: 125 SMFGNILSCKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFIKKSE 184
Query: 197 RAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQS 256
RA + KFTN+YV N +TVT+ LK++F +G ITS IV SD K+R F F+N+
Sbjct: 185 RATNDT--KFTNLYVKNFPDTVTEAHLKQLFSPYGEITSMIV--KSDNKNRKFCFINYSD 240
Query: 257 PDAAAAAVEKLNG--TTNNDKVWYVGRAQKRAEREA 290
D+A A+E LNG T + K+ Y +K +A
Sbjct: 241 ADSARNAMENLNGKKITEDGKIDYNYDPKKEESEKA 276
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 203/401 (50%), Gaps = 29/401 (7%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ +V +L++ ++ L+D FS ++S +V D+ +S Y +V+Y + + A
Sbjct: 101 SGTGNI--FVKNLDKTIDNKALFDTFSMFGNILSCKVATDEFGKSK-NYGFVHYEDEESA 157
Query: 83 ANAKEALNFMPINGKPIRIMY--SHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
A E +N M + K + + + + + + + N+++KN ++ L F+ +G
Sbjct: 158 KEAIEKVNGMQLGSKNVYVGHFIKKSERATNDTKFTNLYVKNFPDTVTEAHLKQLFSPYG 217
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
+ S + + S+ +++ + F+ + + ++A+NA++ LNG I + + ++E +++
Sbjct: 218 EITS--MIVKSDNKNRKFCFINYSDADSARNAMENLNGKKITEDGKIDYNYDPKKEESEK 275
Query: 201 NVSPKFTNVYVNNLAETVTDE---DLKKIFGHFGTITSAIVMKD--------------SD 243
+ + N + T E + K T A +D +D
Sbjct: 276 AANENYNNNNTTSEENATTSETPAEKKTTDSESATNKDATPGEDQTSANGTTTTVTSTTD 335
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNG-----TTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
K+ N + A+ EK + +T + YVG Q RA R A L+AKF+
Sbjct: 336 AKTEETPNDNTANAGINASITEKKDKKKSGESTETPNILYVGPHQSRARRHAILKAKFDT 395
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
K G NLY+KNLDDS+ND+ LKELF +GTITS KVM D SKG GF F
Sbjct: 396 LNTESRNKHPGVNLYIKNLDDSMNDQTLKELFEPYGTITSAKVMKDDKDQSKGFGFVCFG 455
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQF 399
EEA +A+ EM+ K+I KPLYV +A+++E R +RLQ +F
Sbjct: 456 THEEANKAVTEMHLKIINGKPLYVGLAEKREHRLSRLQQRF 496
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 60/97 (61%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
N+Y+ NL +++ D+ LK++F +GTITSA VMKD +S+ FGFV F + + A AV ++
Sbjct: 408 NLYIKNLDDSMNDQTLKELFEPYGTITSAKVMKDDKDQSKGFGFVCFGTHEEANKAVTEM 467
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRY 304
+ N K YVG A+KR R + L+ +F I +
Sbjct: 468 HLKIINGKPLYVGLAEKREHRLSRLQQRFRMNPIRHH 504
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 563 RMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEA 620
++LGE L+PLV N P A K+TGM+LEMD +E+L L+E+ + LK K+ EA+ VLQ A
Sbjct: 775 QVLGENLFPLVANYHPTLAGKITGMMLEMDNSELLILLENEDQLKKKIDEALVVLQNA 832
>gi|296424904|ref|XP_002841985.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638239|emb|CAZ86176.1| unnamed protein product [Tuber melanosporum]
Length = 374
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 141/267 (52%), Positives = 188/267 (70%), Gaps = 2/267 (0%)
Query: 4 TGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQ 63
T + A + +A +A + + + SLYVG+LE +V E+ L++LFS + V S+RVCRD
Sbjct: 29 TSDSDANNSSVAAPHSAPHNSHTSASLYVGELEPSVTEAMLFELFSTIGNVASIRVCRDA 88
Query: 64 SKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
R SLGY+YVNY+N D A E LN+ I G+P RIM+S RDP++RK+G GNVFIKNL
Sbjct: 89 VTRRSLGYSYVNYNNTADGERALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNL 148
Query: 124 DTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND 183
DT+IDNKAL DTFAAFG +LSCKVA D S+GYGFV +E EAA NAIK +NGML+N+
Sbjct: 149 DTAIDNKALHDTFAAFGNILSCKVAQDEFSNSRGYGFVHYETAEAANNAIKHVNGMLLNE 208
Query: 184 KQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD 241
K+V+VG + +++R + + FTNVYV N+ VTDE+ + +F ++G ITSA + +D
Sbjct: 209 KKVFVGHHIPKKDRQSKFDEMKANFTNVYVKNIDPEVTDEEFRTMFENYGPITSASLSRD 268
Query: 242 SDGKSRCFGFVNFQSPDAAAAAVEKLN 268
DG SR FGFVNFQ AA AVE+L+
Sbjct: 269 QDGVSRGFGFVNFQEHQHAAKAVEELH 295
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 140/272 (51%), Gaps = 25/272 (9%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIK 174
++++ L+ S+ L + F+ G V S +V D+ +S GY +V + N + A++
Sbjct: 53 ASLYVGELEPSVTEAMLFELFSTIGNVASIRVCRDAVTRRSLGYSYVNYNNTADGERALE 112
Query: 175 MLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT---NVYVNNLAETVTDEDLKKIFGHFG 231
LN LI + + +Q++ + + T NV++ NL + ++ L F FG
Sbjct: 113 ELNYTLIKGRPCRIMW-------SQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 165
Query: 232 TITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
I S V +D SR +GFV++++ +AA A++ +NG N+K +VG + +R+
Sbjct: 166 NILSCKVAQDEFSNSRGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKDRQ-- 223
Query: 292 LRAKFEQERISRYEKLKG--ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFS 349
S+++++K N+Y+KN+D + DE+ + +F +G ITS + DQ G S
Sbjct: 224 ----------SKFDEMKANFTNVYVKNIDPEVTDEEFRTMFENYGPITSASLSRDQDGVS 273
Query: 350 KGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+G GF F + A +A+ E++ + + LY
Sbjct: 274 RGFGFVNFQEHQHAAKAVEELHESELKGQTLY 305
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 101/199 (50%), Gaps = 20/199 (10%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV L +VT+ L ++F G + S V +D+ +S + +VN+ + A+E+
Sbjct: 54 SLYVGELEPSVTEAMLFELFSTIGNVASIRVCRDAVTRRSLGYSYVNYNNTADGERALEE 113
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
LN T + + +Q R+ LR K N+++KNLD +I+++ L
Sbjct: 114 LNYTLIKGRPCRIMWSQ----RDPALR------------KTGQGNVFIKNLDTAIDNKAL 157
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
+ F+ FG I SCKV D+ S+G GF + E A A+ +NG ++ K ++V
Sbjct: 158 HDTFAAFGNILSCKVAQDEFSNSRGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHI 217
Query: 387 RKEERKAR---LQAQFAQI 402
K++R+++ ++A F +
Sbjct: 218 PKKDRQSKFDEMKANFTNV 236
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 309 GANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEEATRAL 367
A+LY+ L+ S+ + L ELFS G + S +V D S G + ++ + RAL
Sbjct: 52 SASLYVGELEPSVTEAMLFELFSTIGNVASIRVCRDAVTRRSLGYSYVNYNNTADGERAL 111
Query: 368 NEMNGKMIGRKPLYVAVAQR 387
E+N +I +P + +QR
Sbjct: 112 EELNYTLIKGRPCRIMWSQR 131
>gi|82595449|ref|XP_725855.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481012|gb|EAA17420.1| polyA binding protein-related [Plasmodium yoelii yoelii]
Length = 859
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/253 (53%), Positives = 181/253 (71%), Gaps = 4/253 (1%)
Query: 17 TTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNY 76
+T +P + SLYVGDL ++V E+ LY++F+ V V+S+RVCRD R SLGYAYVNY
Sbjct: 5 STNIMPPSFSTASLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRDSVTRKSLGYAYVNY 64
Query: 77 SNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTF 136
N DA A + LN+ I G+P R+M+SHRDPS+RKSG GN+F+KNLD +IDNKAL DTF
Sbjct: 65 HNLADAERALDTLNYTNIKGQPARLMWSHRDPSLRKSGTGNIFVKNLDKTIDNKALFDTF 124
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
+ FG +LSCKVA D G+SK YGFV +E+EE+A+ AI+ +NGM + K VYVG F+++ E
Sbjct: 125 SMFGNILSCKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFIKKSE 184
Query: 197 RAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQS 256
RA + KFTN+YV N +TVT+ LK++F +G ITS IV SD K+R F F+N+
Sbjct: 185 RATNDT--KFTNLYVKNFPDTVTEAHLKQLFSPYGEITSMIV--KSDNKNRKFCFINYSD 240
Query: 257 PDAAAAAVEKLNG 269
D+A A+E LNG
Sbjct: 241 ADSARNAMENLNG 253
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 83/124 (66%)
Query: 276 VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGT 335
+ YVG Q RA R A L+AKF+ K G NLY+KNLDDS+ND+ LKELF +GT
Sbjct: 376 ILYVGPHQSRARRHAILKAKFDTLNTESRNKHPGVNLYIKNLDDSMNDQTLKELFEPYGT 435
Query: 336 ITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARL 395
ITS KVM D SKG GF F EEA +A+ EM+ K+I KPLYV +A+++E+R +RL
Sbjct: 436 ITSAKVMKDDKDQSKGFGFVCFGTHEEANKAVTEMHLKIINGKPLYVGLAEKREQRLSRL 495
Query: 396 QAQF 399
Q +F
Sbjct: 496 QQRF 499
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 61/97 (62%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
N+Y+ NL +++ D+ LK++F +GTITSA VMKD +S+ FGFV F + + A AV ++
Sbjct: 411 NLYIKNLDDSMNDQTLKELFEPYGTITSAKVMKDDKDQSKGFGFVCFGTHEEANKAVTEM 470
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRY 304
+ N K YVG A+KR +R + L+ +F I +
Sbjct: 471 HLKIINGKPLYVGLAEKREQRLSRLQQRFRMHPIRHH 507
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 40/53 (75%)
Query: 563 RMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMA 615
++LGE L+PLV N P A K+TGM+LEMD +E+L L+E+ + LK K+ EA+A
Sbjct: 783 QVLGENLFPLVANYHPTLAGKITGMMLEMDNSELLILLENEDQLKKKIDEALA 835
>gi|198422488|ref|XP_002121866.1| PREDICTED: similar to poly(A) binding protein, cytoplasmic 4
(inducible form) [Ciona intestinalis]
Length = 270
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/249 (55%), Positives = 177/249 (71%), Gaps = 3/249 (1%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+ Y SLYVGDL +V E+ LY+ FSQ V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 7 TNYPMASLYVGDLHLDVTEAMLYEKFSQAGPVLSIRVCRDVITRRSLGYAYVNFQQPADA 66
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +N+ PI G+PIRIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +
Sbjct: 67 ERALDTMNYDPIKGRPIRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNI 126
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-- 200
LSCKV+ + NG SKGYGFV FE EEA AI+ +NGML+NDK+V+VG F+ R ER ++
Sbjct: 127 LSCKVSCNENG-SKGYGFVHFETEEAGIRAIEKVNGMLLNDKKVFVGKFLTRSERIKKMG 185
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+FTNVY+ N + ++ L+ +F +G + S VM+D DG SR FGFV + S + A
Sbjct: 186 ERVRQFTNVYIKNFGDKYDEKTLQVMFEKYGVVKSVAVMRDRDGNSRGFGFVAYDSHEEA 245
Query: 261 AAAVEKLNG 269
AAVE +NG
Sbjct: 246 QAAVEAMNG 254
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 143/273 (52%), Gaps = 20/273 (7%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 13 SLYVGDLHLDVTEAMLYEKFSQAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 72
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N I + + + R + V N+++ NL +++ ++ L F FG I S
Sbjct: 73 MNYDPIKGRPIRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYDTFSAFGNILS 128
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V + +G S+ +GFV+F++ +A A+EK+NG NDK +VG+ R+ER K
Sbjct: 129 CKVSCNENG-SKGYGFVHFETEEAGIRAIEKVNGMLLNDKKVFVGKFLTRSER-----IK 182
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
ER+ ++ N+Y+KN D +++ L+ +F ++G + S VM D+ G S+G GF
Sbjct: 183 KMGERVRQF-----TNVYIKNFGDKYDEKTLQVMFEKYGVVKSVAVMRDRDGNSRGFGFV 237
Query: 356 AFSMPEEATRALNEMNGKMI----GRKPLYVAV 384
A+ EEA A+ MNG+ I G + L++ +
Sbjct: 238 AYDSHEEAQAAVEAMNGQEIEGASGWRLLFLCI 270
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 94/176 (53%), Gaps = 10/176 (5%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ ++ +L+++++ LYD FS ++S +V +++ S GY +V++ +
Sbjct: 97 SGVGNI--FIKNLDKSIDNKALYDTFSAFGNILSCKVSCNEN--GSKGYGFVHFETEEAG 152
Query: 83 ANAKEALNFMPINGKPIRI-MYSHRDPSIRKSG-----YGNVFIKNLDTSIDNKALCDTF 136
A E +N M +N K + + + R I+K G + NV+IKN D K L F
Sbjct: 153 IRAIEKVNGMLLNDKKVFVGKFLTRSERIKKMGERVRQFTNVYIKNFGDKYDEKTLQVMF 212
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFV 192
+G V S V D +G S+G+GFV +++ E AQ A++ +NG I + LF+
Sbjct: 213 EKYGVVKSVAVMRDRDGNSRGFGFVAYDSHEEAQAAVEAMNGQEIEGASGWRLLFL 268
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 22/198 (11%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G + S V +D +S + +VNFQ P A A++
Sbjct: 13 SLYVGDLHLDVTEAMLYEKFSQAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD- 71
Query: 267 LNGTTNNDKVWYVGRAQK--RAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
T N D + GR + ++R+ LR K N+++KNLD SI+++
Sbjct: 72 ---TMNYDPI--KGRPIRIMWSQRDPSLR------------KSGVGNIFIKNLDKSIDNK 114
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
L + FS FG I SCKV +++G SKG GF F E RA+ ++NG ++ K ++V
Sbjct: 115 ALYDTFSAFGNILSCKVSCNENG-SKGYGFVHFETEEAGIRAIEKVNGMLLNDKKVFVGK 173
Query: 385 AQRKEERKARLQAQFAQI 402
+ ER ++ + Q
Sbjct: 174 FLTRSERIKKMGERVRQF 191
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEEATRALN 368
A+LY+ +L + + L E FS+ G + S +V D S G + F P +A RAL+
Sbjct: 12 ASLYVGDLHLDVTEAMLYEKFSQAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 71
Query: 369 EMNGKMIGRKPLYVAVAQR 387
MN I +P+ + +QR
Sbjct: 72 TMNYDPIKGRPIRIMWSQR 90
>gi|74199920|dbj|BAE20776.1| unnamed protein product [Mus musculus]
Length = 266
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 139/256 (54%), Positives = 180/256 (70%), Gaps = 3/256 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V E+ LY+ FS ++S+RV RD R SLGYA VN+ P DA A +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDT 71
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I GKP+RIM+S RDPS+R+SG GNVFIKNL+ +IDNKAL DTF+AFG +LSCKV
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVV 131
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D NG SKG+GFV FE EEAA+ AI+ +NGML+ND++V+VG F ++ER + + +F
Sbjct: 132 SDENG-SKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGTGTKEF 190
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNVY+ N + + DE L +FG FG I S VM D GKS+ FGFV+F+ + A AV++
Sbjct: 191 TNVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDE 250
Query: 267 LNGTTNNDKVWYVGRA 282
+NG N K YVGRA
Sbjct: 251 MNGKELNGKHIYVGRA 266
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 147/270 (54%), Gaps = 16/270 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L + F++ G +LS +V D +S GY V FE A+ A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I K V + R + V NV++ NL +T+ ++ L F FG I S
Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLRRSGVG----NVFIKNLNKTIDNKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D +G S+ GFV+F++ +AA A+EK+NG ND+ +VGR + + EREA+L
Sbjct: 128 CKVVSDENG-SKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGTG 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++ N+Y+KN D ++DE L LF FG I S KVM D+ G SKG GF
Sbjct: 187 TKEF----------TNVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDEGGKSKGFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
+F E+A +A++EMNGK + K +YV A
Sbjct: 237 SFERHEDAQKAVDEMNGKELNGKHIYVGRA 266
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 28/194 (14%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGF--VNFQSPDAAAAAVE 265
++YV +L VT+ L + F G I S V +D + R G+ VNF+ P A A++
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITR-RSLGYASVNFEQPADAERALD 70
Query: 266 KLNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
+N K +W ++R+ LR + N+++KNL+ +I
Sbjct: 71 TMNFDVIKGKPVRIMW--------SQRDPSLR------------RSGVGNVFIKNLNKTI 110
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+++ L + FS FG I SCKV+ D++G SKG GF F E A RA+ +MNG ++ + ++
Sbjct: 111 DNKALYDTFSAFGNILSCKVVSDENG-SKGHGFVHFETEEAAERAIEKMNGMLLNDRKVF 169
Query: 382 VAVAQRKEERKARL 395
V + ++ER+A L
Sbjct: 170 VGRFKSQKEREAEL 183
>gi|156103277|ref|XP_001617331.1| polyadenylate-binding protein [Plasmodium vivax Sal-1]
gi|148806205|gb|EDL47604.1| polyadenylate-binding protein, putative [Plasmodium vivax]
Length = 883
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 135/257 (52%), Positives = 181/257 (70%), Gaps = 5/257 (1%)
Query: 13 VTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYA 72
+ + T PS + SLYVGDL ++V E+ LY++F+ V V S+RVCRD R SLGYA
Sbjct: 2 LATGTNIMHPS-FSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYA 60
Query: 73 YVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKAL 132
YVNY N DA A + LN+ I G+P R+M+SHRDPS+RKSG GN+F+KNLD SIDNKAL
Sbjct: 61 YVNYHNLADAERALDTLNYTNIKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDNKAL 120
Query: 133 CDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFV 192
DTF+ FG +LSCKVA D G+SK YGFV +E+EE+A+ AI+ +NG+ + K VYVG F+
Sbjct: 121 FDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFI 180
Query: 193 RRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFV 252
++ ERA + KFTN+YV N ++VT+ LK++F FG ITS IV +D K+R F F+
Sbjct: 181 KKSERATNDT--KFTNLYVKNFPDSVTEAHLKQLFSPFGEITSMIV--KTDNKNRKFCFI 236
Query: 253 NFQSPDAAAAAVEKLNG 269
N+ ++A A+E LNG
Sbjct: 237 NYADSESAKNAMENLNG 253
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/144 (48%), Positives = 97/144 (67%), Gaps = 2/144 (1%)
Query: 258 DAAAAAVEKLNGTTNND--KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLK 315
+A + +K +G+ N D + YVG Q RA R A L+AKF+ + K +G NLY+K
Sbjct: 395 EATTGSSKKESGSENADSPNILYVGPHQSRARRHAILKAKFDNLNMESKNKHQGVNLYIK 454
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI 375
NLDD+I+D+ LKELF +GTITS KVM D SKG GF F++ EEA RA+ EM+ K+I
Sbjct: 455 NLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFALQEEANRAVTEMHLKII 514
Query: 376 GRKPLYVAVAQRKEERKARLQAQF 399
KPLYV +A+++E+R +RLQ +F
Sbjct: 515 NGKPLYVGLAEKREQRLSRLQQRF 538
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 129/259 (49%), Gaps = 21/259 (8%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKML 176
+++ +L+ + L + F G V S +V DS +S GY +V + N A+ A+ L
Sbjct: 18 LYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDTL 77
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSA 236
N I + + ++ R +++ + N++V NL +++ ++ L F FG I S
Sbjct: 78 NYTNIKGQPARL-MWSHRDPSLRKSGA---GNIFVKNLDKSIDNKALFDTFSMFGNILSC 133
Query: 237 IVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKF 296
V D GKS+ +GFV+++ ++A A+EK+NG K YVG K++ER +
Sbjct: 134 KVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKKSERATN----- 188
Query: 297 EQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAA 356
K NLY+KN DS+ + LK+LFS FG ITS V D ++ F
Sbjct: 189 ---------DTKFTNLYVKNFPDSVTEAHLKQLFSPFGEITSMIVKTDNK--NRKFCFIN 237
Query: 357 FSMPEEATRALNEMNGKMI 375
++ E A A+ +NGK I
Sbjct: 238 YADSESAKNAMENLNGKKI 256
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 100/197 (50%), Gaps = 27/197 (13%)
Query: 202 VSPKFT--NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPD 258
+ P F+ ++YV +L E VT+ L +IF G ++S V +DS KS + +VN+ +
Sbjct: 9 MHPSFSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLA 68
Query: 259 AAAAAVEKLNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYL 314
A A++ LN T + +W + R+ LR K N+++
Sbjct: 69 DAERALDTLNYTNIKGQPARLMW--------SHRDPSLR------------KSGAGNIFV 108
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLD SI+++ L + FS FG I SCKV D+ G SK GF + E A A+ ++NG
Sbjct: 109 KNLDKSIDNKALFDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQ 168
Query: 375 IGRKPLYVAVAQRKEER 391
+G K +YV +K ER
Sbjct: 169 LGSKNVYVGHFIKKSER 185
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 95/179 (53%), Gaps = 7/179 (3%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ +V +L+++++ L+D FS ++S +V D+ +S Y +V+Y + + A
Sbjct: 101 SGAGNI--FVKNLDKSIDNKALFDTFSMFGNILSCKVATDEFGKSK-SYGFVHYEDEESA 157
Query: 83 ANAKEALNFMPINGKPIRIMY--SHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
A E +N + + K + + + + + + + N+++KN S+ L F+ FG
Sbjct: 158 KEAIEKVNGIQLGSKNVYVGHFIKKSERATNDTKFTNLYVKNFPDSVTEAHLKQLFSPFG 217
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
+ S V D+ +++ + F+ + + E+A+NA++ LNG I D + ++E A+
Sbjct: 218 EITSMIVKTDN--KNRKFCFINYADSESAKNAMENLNGKKITDDGQIDPTYDAKKEEAE 274
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 54/81 (66%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N++IKNLD +ID++ L + F +GT+ S KV D QSKG+GFV F +E A A+ +
Sbjct: 450 NLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFALQEEANRAVTEM 509
Query: 177 NGMLINDKQVYVGLFVRRQER 197
+ +IN K +YVGL +R++R
Sbjct: 510 HLKIINGKPLYVGLAEKREQR 530
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 59/97 (60%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
N+Y+ NL + + D+ LK++F +GTITSA VM+D +S+ FGFV F + A AV ++
Sbjct: 450 NLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFALQEEANRAVTEM 509
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRY 304
+ N K YVG A+KR +R + L+ +F I +
Sbjct: 510 HLKIINGKPLYVGLAEKREQRLSRLQQRFRMHPIRHH 546
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 45/60 (75%)
Query: 561 RTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEA 620
+ ++LGE L+PLV N P A K+TGM+LEMD +E+L L+E+ E LK K+ EA+ VLQ+A
Sbjct: 823 QKQVLGENLFPLVANYHPTLAGKITGMMLEMDNSELLILLENEEQLKKKIDEALVVLQKA 882
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
V+LY+ +L+ +++ L +LF + S +V RD K S G+ +V ++ ++A A
Sbjct: 449 VNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRD-DKEQSKGFGFVCFALQEEANRAVT 507
Query: 88 ALNFMPINGKPIRI 101
++ INGKP+ +
Sbjct: 508 EMHLKIINGKPLYV 521
>gi|221061487|ref|XP_002262313.1| polyadenylate-binding protein [Plasmodium knowlesi strain H]
gi|193811463|emb|CAQ42191.1| polyadenylate-binding protein, putative [Plasmodium knowlesi strain
H]
Length = 874
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 135/257 (52%), Positives = 181/257 (70%), Gaps = 5/257 (1%)
Query: 13 VTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYA 72
+ + T PS + SLYVGDL ++V E+ LY++F+ V V S+RVCRD R SLGYA
Sbjct: 2 LATGTNIMHPS-FSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYA 60
Query: 73 YVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKAL 132
YVNY N DA A + LN+ I G+P R+M+SHRDPS+RKSG GN+F+KNLD SIDNKAL
Sbjct: 61 YVNYHNLADAERALDTLNYTNIKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDNKAL 120
Query: 133 CDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFV 192
DTF+ FG +LSCKVA D G+SK YGFV +E+EE+A+ AI+ +NG+ + K VYVG F+
Sbjct: 121 FDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFI 180
Query: 193 RRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFV 252
+R ERA + KFTN+YV N ++VT+ LK++F +G ITS IV +D K+R F F+
Sbjct: 181 KRSERATNDT--KFTNLYVKNFPDSVTEAHLKQLFSPYGEITSMIV--KTDNKNRKFCFI 236
Query: 253 NFQSPDAAAAAVEKLNG 269
N+ ++A A+E LNG
Sbjct: 237 NYADSESAKNAMENLNG 253
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 86/124 (69%)
Query: 276 VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGT 335
+ YVG Q RA R A L+AKF+ + K +G NLY+KNLDD+I+D+ LKELF +GT
Sbjct: 406 ILYVGPHQSRARRHAILKAKFDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGT 465
Query: 336 ITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARL 395
ITS KVM D SKG GF F+ EEA +A+ EM+ K+I KPLYV +A+++E+R +RL
Sbjct: 466 ITSAKVMRDDKEQSKGFGFVCFAQQEEANKAVTEMHLKIINGKPLYVGLAEKREQRLSRL 525
Query: 396 QAQF 399
Q +F
Sbjct: 526 QQRF 529
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 130/259 (50%), Gaps = 21/259 (8%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKML 176
+++ +L+ + L + F G V S +V DS +S GY +V + N A+ A+ L
Sbjct: 18 LYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDTL 77
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSA 236
N I + + ++ R +++ + N++V NL +++ ++ L F FG I S
Sbjct: 78 NYTNIKGQPARL-MWSHRDPSLRKSGA---GNIFVKNLDKSIDNKALFDTFSMFGNILSC 133
Query: 237 IVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKF 296
V D GKS+ +GFV+++ ++A A+EK+NG K YVG KR+ER + KF
Sbjct: 134 KVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKRSERATN-DTKF 192
Query: 297 EQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAA 356
NLY+KN DS+ + LK+LFS +G ITS V D ++ F
Sbjct: 193 -------------TNLYVKNFPDSVTEAHLKQLFSPYGEITSMIVKTDNK--NRKFCFIN 237
Query: 357 FSMPEEATRALNEMNGKMI 375
++ E A A+ +NGK I
Sbjct: 238 YADSESAKNAMENLNGKKI 256
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 27/197 (13%)
Query: 202 VSPKFT--NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPD 258
+ P F+ ++YV +L E VT+ L +IF G ++S V +DS KS + +VN+ +
Sbjct: 9 MHPSFSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLA 68
Query: 259 AAAAAVEKLNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYL 314
A A++ LN T + +W + R+ LR K N+++
Sbjct: 69 DAERALDTLNYTNIKGQPARLMW--------SHRDPSLR------------KSGAGNIFV 108
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLD SI+++ L + FS FG I SCKV D+ G SK GF + E A A+ ++NG
Sbjct: 109 KNLDKSIDNKALFDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQ 168
Query: 375 IGRKPLYVAVAQRKEER 391
+G K +YV ++ ER
Sbjct: 169 LGSKNVYVGHFIKRSER 185
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 54/81 (66%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N++IKNLD +ID++ L + F +GT+ S KV D QSKG+GFV F +E A A+ +
Sbjct: 441 NLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFAQQEEANKAVTEM 500
Query: 177 NGMLINDKQVYVGLFVRRQER 197
+ +IN K +YVGL +R++R
Sbjct: 501 HLKIINGKPLYVGLAEKREQR 521
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ +V +L+++++ L+D FS ++S +V D+ +S Y +V+Y + + A
Sbjct: 101 SGAGNI--FVKNLDKSIDNKALFDTFSMFGNILSCKVATDEFGKSK-SYGFVHYEDEESA 157
Query: 83 ANAKEALNFMPINGKPIRIMY--SHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
A E +N + + K + + + + + + + N+++KN S+ L F+ +G
Sbjct: 158 KEAIEKVNGIQLGSKNVYVGHFIKRSERATNDTKFTNLYVKNFPDSVTEAHLKQLFSPYG 217
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND 183
+ S V D+ +++ + F+ + + E+A+NA++ LNG I D
Sbjct: 218 EITSMIVKTDN--KNRKFCFINYADSESAKNAMENLNGKKITD 258
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 59/97 (60%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
N+Y+ NL + + D+ LK++F +GTITSA VM+D +S+ FGFV F + A AV ++
Sbjct: 441 NLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFAQQEEANKAVTEM 500
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRY 304
+ N K YVG A+KR +R + L+ +F I +
Sbjct: 501 HLKIINGKPLYVGLAEKREQRLSRLQQRFRMHPIRHH 537
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 563 RMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEA 620
++LGE L+PLV N P A K+TGM+LEMD +E+L L+E+ E LK K+ EA+ VLQ+A
Sbjct: 816 QVLGENLFPLVANYHPTLAGKITGMMLEMDNSELLILLENEEQLKKKIDEALVVLQKA 873
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
V+LY+ +L+ +++ L +LF + S +V RD K S G+ +V ++ ++A A
Sbjct: 440 VNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRD-DKEQSKGFGFVCFAQQEEANKAVT 498
Query: 88 ALNFMPINGKPIRI 101
++ INGKP+ +
Sbjct: 499 EMHLKIINGKPLYV 512
>gi|389586343|dbj|GAB69072.1| polyadenylate-binding protein, partial [Plasmodium cynomolgi strain
B]
Length = 883
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/257 (52%), Positives = 181/257 (70%), Gaps = 5/257 (1%)
Query: 13 VTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYA 72
+ + T PS + SLYVGDL ++V E+ LY++F+ V V S+RVCRD R SLGYA
Sbjct: 2 LATGTNIMHPS-FSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYA 60
Query: 73 YVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKAL 132
YVNY N DA A + LN+ I G+P R+M+SHRDPS+RKSG GN+F+KNLD SIDNKAL
Sbjct: 61 YVNYHNLADAERALDTLNYTNIKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDNKAL 120
Query: 133 CDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFV 192
DTF+ FG +LSCKVA D G+SK YGFV +E+EE+A+ AI+ +NG+ + K VYVG F+
Sbjct: 121 FDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFI 180
Query: 193 RRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFV 252
++ ERA + KFTN+YV N ++VT+ LK++F +G ITS IV +D K+R F F+
Sbjct: 181 KKSERATNDT--KFTNLYVKNFPDSVTETHLKELFSPYGEITSMIV--KTDNKNRKFCFI 236
Query: 253 NFQSPDAAAAAVEKLNG 269
N+ ++A A+E LNG
Sbjct: 237 NYADSESAKNAMENLNG 253
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 94/137 (68%), Gaps = 2/137 (1%)
Query: 265 EKLNGTTNND--KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
+K +G+ N D + YVG Q RA R A L+AKF+ + K +G NLY+KNLDD+I+
Sbjct: 402 KKESGSENADSPNILYVGPHQSRARRHAILKAKFDNLNMESKNKHQGVNLYIKNLDDAID 461
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
D+ LKELF +GTITS KVM D SKG GF F++ EEA +A+ EM+ K+I KPLYV
Sbjct: 462 DQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFALQEEANKAVTEMHLKIINGKPLYV 521
Query: 383 AVAQRKEERKARLQAQF 399
+A+++E+R +RLQ +F
Sbjct: 522 GLAEKREQRLSRLQQRF 538
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 129/259 (49%), Gaps = 21/259 (8%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKML 176
+++ +L+ + L + F G V S +V DS +S GY +V + N A+ A+ L
Sbjct: 18 LYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDTL 77
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSA 236
N I + + ++ R +++ + N++V NL +++ ++ L F FG I S
Sbjct: 78 NYTNIKGQPARL-MWSHRDPSLRKSGA---GNIFVKNLDKSIDNKALFDTFSMFGNILSC 133
Query: 237 IVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKF 296
V D GKS+ +GFV+++ ++A A+EK+NG K YVG K++ER +
Sbjct: 134 KVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKKSERATN----- 188
Query: 297 EQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAA 356
K NLY+KN DS+ + LKELFS +G ITS V D ++ F
Sbjct: 189 ---------DTKFTNLYVKNFPDSVTETHLKELFSPYGEITSMIVKTDNK--NRKFCFIN 237
Query: 357 FSMPEEATRALNEMNGKMI 375
++ E A A+ +NGK I
Sbjct: 238 YADSESAKNAMENLNGKKI 256
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 100/197 (50%), Gaps = 27/197 (13%)
Query: 202 VSPKFT--NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPD 258
+ P F+ ++YV +L E VT+ L +IF G ++S V +DS KS + +VN+ +
Sbjct: 9 MHPSFSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLA 68
Query: 259 AAAAAVEKLNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYL 314
A A++ LN T + +W + R+ LR K N+++
Sbjct: 69 DAERALDTLNYTNIKGQPARLMW--------SHRDPSLR------------KSGAGNIFV 108
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLD SI+++ L + FS FG I SCKV D+ G SK GF + E A A+ ++NG
Sbjct: 109 KNLDKSIDNKALFDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQ 168
Query: 375 IGRKPLYVAVAQRKEER 391
+G K +YV +K ER
Sbjct: 169 LGSKNVYVGHFIKKSER 185
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 54/81 (66%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N++IKNLD +ID++ L + F +GT+ S KV D QSKG+GFV F +E A A+ +
Sbjct: 450 NLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFALQEEANKAVTEM 509
Query: 177 NGMLINDKQVYVGLFVRRQER 197
+ +IN K +YVGL +R++R
Sbjct: 510 HLKIINGKPLYVGLAEKREQR 530
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 59/97 (60%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
N+Y+ NL + + D+ LK++F +GTITSA VM+D +S+ FGFV F + A AV ++
Sbjct: 450 NLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFALQEEANKAVTEM 509
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRY 304
+ N K YVG A+KR +R + L+ +F I +
Sbjct: 510 HLKIINGKPLYVGLAEKREQRLSRLQQRFRMHPIRHH 546
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 45/60 (75%)
Query: 561 RTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEA 620
+ ++LGE L+PLV N P A K+TGM+LEMD +E+L L+E+ E LK K+ EA+ VLQ+A
Sbjct: 824 QKQVLGENLFPLVANYHPTLAGKITGMMLEMDNSELLILLENEEQLKKKIDEALVVLQKA 883
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
V+LY+ +L+ +++ L +LF + S +V RD K S G+ +V ++ ++A A
Sbjct: 449 VNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRD-DKEQSKGFGFVCFALQEEANKAVT 507
Query: 88 ALNFMPINGKPIRI 101
++ INGKP+ +
Sbjct: 508 EMHLKIINGKPLYV 521
>gi|124806145|ref|XP_001350640.1| polyadenylate-binding protein, putative [Plasmodium falciparum 3D7]
gi|23496765|gb|AAN36320.1|AE014847_47 polyadenylate-binding protein, putative [Plasmodium falciparum 3D7]
gi|119352249|gb|ABL63812.1| polyadenylate-binding protein [Plasmodium falciparum]
Length = 875
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/257 (51%), Positives = 181/257 (70%), Gaps = 5/257 (1%)
Query: 13 VTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYA 72
+ + T PS + SLYVGDL ++V E+ LY++F+ V V S+RVCRD R SLGYA
Sbjct: 2 IATGTNMMHPS-FSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYA 60
Query: 73 YVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKAL 132
YVNY N DA A + LN+ I G+P R+M+SHRDPS+RKSG GN+F+KNLD SIDNKAL
Sbjct: 61 YVNYHNLADAERALDTLNYTNIKGQPARLMWSHRDPSLRKSGTGNIFVKNLDKSIDNKAL 120
Query: 133 CDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFV 192
DTF+ FG +LSCKVA D G+SK YGFV +E+EE+A+ AI+ +NG+ + K VYVG F+
Sbjct: 121 FDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGVQLGSKNVYVGPFI 180
Query: 193 RRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFV 252
++ ERA + KFTN+YV N ++VT+ L+++F +G ITS IV D+ K+R F F+
Sbjct: 181 KKSERATNDT--KFTNLYVKNFPDSVTETHLRQLFNPYGEITSMIVKMDN--KNRKFCFI 236
Query: 253 NFQSPDAAAAAVEKLNG 269
N+ ++A A++ LNG
Sbjct: 237 NYADAESAKNAMDNLNG 253
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 85/124 (68%)
Query: 276 VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGT 335
+ YVG Q RA R A L+AKF+ + K +G NLY+KNLDD I+D L+ELF FGT
Sbjct: 416 ILYVGPHQSRARRHAILKAKFDNLNVENKNKHQGVNLYIKNLDDGIDDIMLRELFEPFGT 475
Query: 336 ITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARL 395
ITS KVM D+ SKG GF F+ EEA +A+ EM+ K+I KPLYV +A+++E+R +RL
Sbjct: 476 ITSAKVMRDEKEQSKGFGFVCFASQEEANKAVTEMHLKIINGKPLYVGLAEKREQRLSRL 535
Query: 396 QAQF 399
Q +F
Sbjct: 536 QQRF 539
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 131/259 (50%), Gaps = 21/259 (8%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKML 176
+++ +L+ + L + F G V S +V DS +S GY +V + N A+ A+ L
Sbjct: 18 LYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDTL 77
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSA 236
N I + + ++ R +++ + N++V NL +++ ++ L F FG I S
Sbjct: 78 NYTNIKGQPARL-MWSHRDPSLRKSGT---GNIFVKNLDKSIDNKALFDTFSMFGNILSC 133
Query: 237 IVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKF 296
V D GKS+ +GFV+++ ++A A+EK+NG K YVG K++ER +
Sbjct: 134 KVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGVQLGSKNVYVGPFIKKSERATN----- 188
Query: 297 EQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAA 356
K NLY+KN DS+ + L++LF+ +G ITS V +D ++ F
Sbjct: 189 ---------DTKFTNLYVKNFPDSVTETHLRQLFNPYGEITSMIVKMDNK--NRKFCFIN 237
Query: 357 FSMPEEATRALNEMNGKMI 375
++ E A A++ +NGK I
Sbjct: 238 YADAESAKNAMDNLNGKKI 256
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 100/197 (50%), Gaps = 27/197 (13%)
Query: 202 VSPKFT--NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPD 258
+ P F+ ++YV +L E VT+ L +IF G ++S V +DS KS + +VN+ +
Sbjct: 9 MHPSFSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLA 68
Query: 259 AAAAAVEKLNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYL 314
A A++ LN T + +W + R+ LR K N+++
Sbjct: 69 DAERALDTLNYTNIKGQPARLMW--------SHRDPSLR------------KSGTGNIFV 108
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLD SI+++ L + FS FG I SCKV D+ G SK GF + E A A+ ++NG
Sbjct: 109 KNLDKSIDNKALFDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGVQ 168
Query: 375 IGRKPLYVAVAQRKEER 391
+G K +YV +K ER
Sbjct: 169 LGSKNVYVGPFIKKSER 185
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N++IKNLD ID+ L + F FGT+ S KV D QSKG+GFV F ++E A A+ +
Sbjct: 451 NLYIKNLDDGIDDIMLRELFEPFGTITSAKVMRDEKEQSKGFGFVCFASQEEANKAVTEM 510
Query: 177 NGMLINDKQVYVGLFVRRQER 197
+ +IN K +YVGL +R++R
Sbjct: 511 HLKIINGKPLYVGLAEKREQR 531
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 89/168 (52%), Gaps = 17/168 (10%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ +V +L+++++ L+D FS ++S +V D+ +S Y +V+Y + + A
Sbjct: 101 SGTGNI--FVKNLDKSIDNKALFDTFSMFGNILSCKVATDEFGKSK-SYGFVHYEDEESA 157
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKS-------GYGNVFIKNLDTSIDNKALCDT 135
A E +N + + K + + P I+KS + N+++KN S+ L
Sbjct: 158 KEAIEKVNGVQLGSKNVYV-----GPFIKKSERATNDTKFTNLYVKNFPDSVTETHLRQL 212
Query: 136 FAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND 183
F +G + S V +D+ +++ + F+ + + E+A+NA+ LNG I D
Sbjct: 213 FNPYGEITSMIVKMDN--KNRKFCFINYADAESAKNAMDNLNGKKITD 258
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 59/97 (60%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
N+Y+ NL + + D L+++F FGTITSA VM+D +S+ FGFV F S + A AV ++
Sbjct: 451 NLYIKNLDDGIDDIMLRELFEPFGTITSAKVMRDEKEQSKGFGFVCFASQEEANKAVTEM 510
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRY 304
+ N K YVG A+KR +R + L+ +F I +
Sbjct: 511 HLKIINGKPLYVGLAEKREQRLSRLQQRFRMHPIRHH 547
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 563 RMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEA 620
++LGE L+PLV N P A K+TGM+LEMD +E+L L+E+ E LK K+ EA+ VLQ+A
Sbjct: 817 QVLGENLFPLVANYHPTLAGKITGMMLEMDNSELLILLENEEQLKKKIDEALVVLQKA 874
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
V+LY+ +L+ +++ L +LF + S +V RD+ K S G+ +V +++ ++A A
Sbjct: 450 VNLYIKNLDDGIDDIMLRELFEPFGTITSAKVMRDE-KEQSKGFGFVCFASQEEANKAVT 508
Query: 88 ALNFMPINGKPIRI 101
++ INGKP+ +
Sbjct: 509 EMHLKIINGKPLYV 522
>gi|157870420|ref|XP_001683760.1| poly(A)-binding protein 3 [Leishmania major strain Friedlin]
gi|68126827|emb|CAJ04400.1| poly(A)-binding protein 3 [Leishmania major strain Friedlin]
Length = 544
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 232/398 (58%), Gaps = 19/398 (4%)
Query: 29 SLYVGDLEQNVN--ESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
S+YVGDL ++ E + +LFS VA VVSV+VCRD + + SLGY YVN+ DA
Sbjct: 9 SVYVGDLPIDLPRPEEAINNLFSTVAPVVSVKVCRDMATQRSLGYGYVNFQTTADAEKVI 68
Query: 87 EALNFMPIN-GKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSC 145
+ALN+ I G+ IR+M+S RDP RKSG NVF+K LDT+I+ K L F+ G VLSC
Sbjct: 69 DALNYTGIAPGRQIRVMFSIRDPLQRKSGMNNVFVKKLDTAINAKELQAAFSKCGRVLSC 128
Query: 146 KVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK 205
KVA+DS G SKGYGFVQFE + + A++M NG + D +V V FVRR +R + +
Sbjct: 129 KVALDSAGNSKGYGFVQFETADGTKAALEM-NGSKLGDSEVVVAPFVRRVDR-EAMAAKS 186
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
F N+Y+ N+ + T+ D+K I FG + S + + + ++ F V F+ AA A+
Sbjct: 187 FRNIYIKNITASATEADVKAIVEEFGKVDSLFLSEHARFPTK-FALVAFEEHQAAVQAIA 245
Query: 266 KLN-----GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
LN G T V RA ++ER+ E+++ + + G NLY+K+L D
Sbjct: 246 ALNESEESGLTEKAVKLVVCRALSKSERDR------EKKKAASLYQNHGRNLYIKHLPDD 299
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR--K 378
I D++L+E+F FG ITSC +M + +G KG F F + A+ AL +NG + K
Sbjct: 300 ITDDRLREIFEPFGKITSCAIMKEPNGTLKGFAFVCFEDKQHASAALRSLNGHPLEHSAK 359
Query: 379 PLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIP 416
PLYV+ A++K+ R LQ + A +R M+PL + P
Sbjct: 360 PLYVSHAEQKDMRIRLLQQRRAAMRHQSRMAPLMNTFP 397
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 553 LASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAE 612
L++ SP+ + LGE LY + +E +A+K+TGMLLEM + E+ ++ AL +K+ E
Sbjct: 474 LSTLSPEQQKNYLGELLYSRILPLESSNAAKITGMLLEMSREEIFEILADHFALLSKIQE 533
Query: 613 AMAVLQE 619
A AVLQ+
Sbjct: 534 ANAVLQQ 540
>gi|71993217|ref|NP_001021711.1| Protein PAB-1, isoform c [Caenorhabditis elegans]
gi|38422743|emb|CAE54917.1| Protein PAB-1, isoform c [Caenorhabditis elegans]
Length = 586
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 203/569 (35%), Positives = 293/569 (51%), Gaps = 89/569 (15%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQ-SKGYGFVQFENEEAAQNAIKM 175
++++ +L ++ L + F+A G VLS +V D+ + S GY +V F+ A+ A+
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 176 LNGMLINDK---------------------------QVYVGLFVRRQERAQQN-----VS 203
+N ++ K +V+VG F Q RAQ+N +
Sbjct: 93 MNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVFVGKF---QPRAQRNRELGETA 149
Query: 204 PKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAA 263
+FTNVYV N + E L+K+F FG ITS VM +GKS+ FGFV F +P+ A A
Sbjct: 150 KQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVM-TVEGKSKGFGFVAFANPEEAETA 208
Query: 264 VEKLNGTT--NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
V+ L+ +T D +V RAQK++ER A+L+ K EQ + R +K +G NLY+KNLD+++
Sbjct: 209 VQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETV 268
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+D+ LK+ F +G ITS KVM D++G SKG GF F PEEAT A+ EMN KM+ KPLY
Sbjct: 269 DDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLY 328
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMP 441
VA+AQRKE+R+A+L +Q+ Q A M G Y+ P G YY M
Sbjct: 329 VAIAQRKEDRRAQLASQYMQRLASMRMHGNVPGAAMYNPTQPGPG----YY---VANPMQ 381
Query: 442 PQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSN 501
Q G QQ V PG R G N Y +Q Q Q GV + ++M +PQ N
Sbjct: 382 QQRNFAGGQQMVRPGGRWGMQNQ---YPVQNQYMMAQGPGVYQ----NRMGRPQ---NQQ 431
Query: 502 QGIRYLDNARNGTDQSVVSMVPVP-----------------------FEVSGMPATP--- 535
G R N Q V M P +G A P
Sbjct: 432 GGPRGPPQQYNQVAQGGVRMQGPPRTQNPGVQQQNVPRPPQQQQQQRPAPTGPKAPPQPY 491
Query: 536 -VETPRPVPVPI---STLTSA-LASASPDDRTRMLGEQLYPLVENIEPVH--ASKVTGML 588
RP + I LTSA LA+A+P ++ ++LGE++Y L+E + P H A K+TGM+
Sbjct: 492 QAYQQRPQGIVIGGQEPLTSAMLAAAAPQEQKQLLGERIYALIEKLYPGHKDAGKITGMM 551
Query: 589 LEMDQTEVLHLIESPEALKTKVAEAMAVL 617
LE+D +E++ +++ E ++KV EA +VL
Sbjct: 552 LEIDNSELIMMLQDSELFRSKVDEAASVL 580
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/340 (39%), Positives = 190/340 (55%), Gaps = 50/340 (14%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y SLYVGDL +VNES L++ FS V+S+RVCRD + R SLGYAYVN+ P DA
Sbjct: 27 SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADA 86
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSI---------DNKALC 133
A + +NF ++GKP+RIM+S RDP++R+SG GN+FIKNLD N+ L
Sbjct: 87 ERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVFVGKFQPRAQRNRELG 146
Query: 134 DT------------------------FAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAA 169
+T FA FG + SC+V + G+SKG+GFV F N E A
Sbjct: 147 ETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEV-MTVEGKSKGFGFVAFANPEEA 205
Query: 170 QNAIKMLNGMLI--NDKQVYVGLFVRRQER------------AQQNVSPKFTNVYVNNLA 215
+ A++ L+ I D +++V ++ ER A++ + N+YV NL
Sbjct: 206 ETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLD 265
Query: 216 ETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDK 275
ETV D+ LKK F +G ITSA VM D +G+S+ FGFV F+ P+ A +AV ++N K
Sbjct: 266 ETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSK 325
Query: 276 VWYVGRAQKRAEREADLRAKFEQERIS--RYEKLKGANLY 313
YV AQ++ +R A L +++ Q S + + GA +Y
Sbjct: 326 PLYVAIAQRKEDRRAQLASQYMQRLASMRMHGNVPGAAMY 365
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHG-FSKGSGFAAFSMPEEATRALN 368
A+LY+ +L +N+ L E FS G + S +V D S G + F P +A RA++
Sbjct: 32 ASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMD 91
Query: 369 EMNGKMIGRKPLYVAVAQR 387
MN + + KP+ + +QR
Sbjct: 92 TMNFEALHGKPMRIMWSQR 110
>gi|154338582|ref|XP_001565513.1| putative poly(A)-binding protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062565|emb|CAM39007.1| putative poly(A)-binding protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 552
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 157/398 (39%), Positives = 235/398 (59%), Gaps = 19/398 (4%)
Query: 29 SLYVGDLEQNVN--ESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
S++VGDL ++ E + +LFS +A VVSV+VCRD + + SLGY YVN+ DA
Sbjct: 9 SVFVGDLPVDLPRPEEAINNLFSSIAPVVSVKVCRDIATQRSLGYGYVNFQTTADAEKVI 68
Query: 87 EALNFMPIN-GKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSC 145
+ALNF I G+ IR+M++ RDP RKSG N+F+K LD ++ KAL F+ G VLSC
Sbjct: 69 DALNFTGIAPGRYIRVMFAIRDPLQRKSGANNIFVKKLDAAVSAKALQAAFSRCGRVLSC 128
Query: 146 KVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK 205
KVA+DS G SKGYGFVQFE + A+ A+ M NG + D +V V FVRR +R + +
Sbjct: 129 KVALDSEGHSKGYGFVQFETADGAKAALDM-NGAKVGDSEVEVAPFVRRVDR-EAMAAKS 186
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
F N+Y+ N+ T T+ D++ FG +TS + + + ++ F F+ +AA A+
Sbjct: 187 FRNIYIKNIKATATEVDMRTTLEKFGKVTSLFLAEHAPFLTK-FALAVFEEHEAAVKAIA 245
Query: 266 KLN-----GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
+LN G T V RA ++ER+ E+++ + + G NLY+K+L D
Sbjct: 246 ELNESEESGLTEEAVKLVVCRALSKSERDR------ERKKTASLYQNHGRNLYVKHLPDD 299
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI--GRK 378
I D+KL+E+F+ FG ITSC +M + +G +G F F + AT A+ E+NG+ + +K
Sbjct: 300 ITDDKLREIFAPFGKITSCAIMRESNGSLRGFAFVCFEDKQHATAAMRELNGRSLESSKK 359
Query: 379 PLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIP 416
PLYV+ A++K+ R LQ + A +R M+P + P
Sbjct: 360 PLYVSQAEQKDMRIRLLQQRRAAMRHQTRMAPPMNTFP 397
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 553 LASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAE 612
L + SP+ + LGE LY + +E +A+K+TGMLLEM + E+ ++ AL K+ E
Sbjct: 482 LNTLSPEQQKNYLGELLYSRIMPVESFNAAKITGMLLEMSREEIFEVLRDHFALLAKIQE 541
Query: 613 AMAVLQE 619
A AVLQ+
Sbjct: 542 ANAVLQQ 548
>gi|398016302|ref|XP_003861339.1| poly(A)-binding protein, putative [Leishmania donovani]
gi|322499565|emb|CBZ34638.1| poly(A)-binding protein, putative [Leishmania donovani]
Length = 544
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 231/398 (58%), Gaps = 19/398 (4%)
Query: 29 SLYVGDLEQNVN--ESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
S+YVGDL ++ E + +LFS VA VVSV+VCRD + + SLGY YVN+ DA
Sbjct: 9 SVYVGDLPIDLPRPEEAINNLFSTVAPVVSVKVCRDMATQRSLGYGYVNFQTTADAEKVI 68
Query: 87 EALNFMPIN-GKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSC 145
+ALN+ I G+ IR+M+S RDP RKSG NVF+K LDT+I+ K L F G VLSC
Sbjct: 69 DALNYTGIAPGRQIRVMFSIRDPLQRKSGMNNVFVKKLDTAINAKELQAAFTKCGRVLSC 128
Query: 146 KVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK 205
KVA+DS G SKGYGFVQFE E A+ A+ M NG + D +V V FVRR +R + +
Sbjct: 129 KVALDSAGNSKGYGFVQFETAEGAKAALDM-NGSKLGDSEVVVAPFVRRVDR-EVMAAKS 186
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
F N+Y+ N+A T+ D+K FG + S + + + ++ F V F+ +AA A+
Sbjct: 187 FRNIYIKNIAAAATEADVKAAAEKFGKVNSLFLSEHAPFPTK-FALVAFEEHEAAVQAIA 245
Query: 266 KLN-----GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
LN G T V RA ++ER+ E+++ + + G NLY+K+L D
Sbjct: 246 ALNESEESGLTEKAAKLVVCRALSKSERDR------EKKKAASLYQNHGRNLYVKHLPDD 299
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI--GRK 378
I D++L+E+F FG ITSC +M + +G KG F F + A+ AL +NG+ + +K
Sbjct: 300 ITDDRLREIFEPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAALRSLNGQPLEHSKK 359
Query: 379 PLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIP 416
PLYV+ A++K+ R LQ + A +R M P + P
Sbjct: 360 PLYVSHAEQKDMRIRLLQQRRAAMRHQSRMVPPMNTFP 397
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 553 LASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAE 612
L++ SP+ + LGE LY + +E +A+K+TGMLLEM + E+ ++ AL +K+ E
Sbjct: 474 LSTLSPEQQKNYLGELLYSRILPLESSNAAKITGMLLEMSREEIFEILADHFALLSKIQE 533
Query: 613 AMAVLQE 619
A AVLQ+
Sbjct: 534 ANAVLQQ 540
>gi|146088402|ref|XP_001466041.1| putative poly(A)-binding protein 3 [Leishmania infantum JPCM5]
gi|134070143|emb|CAM68476.1| putative poly(A)-binding protein 3 [Leishmania infantum JPCM5]
Length = 544
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/398 (40%), Positives = 230/398 (57%), Gaps = 19/398 (4%)
Query: 29 SLYVGDLEQNVN--ESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
S+YVGDL ++ E + +LFS VA VVSV+VCRD + + SLGY YVN+ DA
Sbjct: 9 SVYVGDLPIDLPRPEEAINNLFSTVAPVVSVKVCRDMATQRSLGYGYVNFQTTADAEKVI 68
Query: 87 EALNFMPIN-GKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSC 145
+ALN+ I G IR+M+S RDP RKSG NVF+K LDT+I+ K L F G VLSC
Sbjct: 69 DALNYTGIAPGLQIRVMFSIRDPLQRKSGMNNVFVKKLDTAINAKELQAAFTKCGRVLSC 128
Query: 146 KVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK 205
KVA+DS G SKGYGFVQFE E A+ A+ M NG + D +V V FVRR +R + +
Sbjct: 129 KVALDSAGNSKGYGFVQFETAEGAKAALDM-NGSKLGDSEVVVAPFVRRVDR-EVMAAKS 186
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
F N+Y+ N+A T+ D+K FG + S + + + ++ F V F+ +AA A+
Sbjct: 187 FRNIYIKNIAAAATEADVKAAAEKFGKVNSLFLSEHAPFPTK-FALVAFEEHEAAVQAIA 245
Query: 266 KLN-----GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
LN G T V RA ++ER+ E+++ + + G NLY+K+L D
Sbjct: 246 ALNESEESGLTEKAAKLVVCRALSKSERDR------EKKKAASLYQNHGRNLYVKHLPDD 299
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI--GRK 378
I D+KL+E+F FG ITSC +M + +G KG F F + A+ AL +NG+ + +K
Sbjct: 300 ITDDKLREIFEPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAALRSLNGQPLEHSKK 359
Query: 379 PLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIP 416
PLYV+ A++K+ R LQ + A +R M P + P
Sbjct: 360 PLYVSHAEQKDMRIRLLQQRRAAMRHQSRMVPPMNTFP 397
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 553 LASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAE 612
L++ SP+ + LGE LY + +E +A+K+TGMLLEM + E+ ++ AL +K+ E
Sbjct: 474 LSTLSPEQQKNYLGELLYSRILPLESSNAAKITGMLLEMSREEIFEILADHFALLSKIQE 533
Query: 613 AMAVLQE 619
A AVLQ+
Sbjct: 534 ANAVLQQ 540
>gi|345316987|ref|XP_003429815.1| PREDICTED: embryonic polyadenylate-binding protein A-like
[Ornithorhynchus anatinus]
Length = 540
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 151/347 (43%), Positives = 195/347 (56%), Gaps = 63/347 (18%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A +GY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P
Sbjct: 3 ATGAGYPLASLYVGDLHVDVTEAMLYEKFSPAGSIISIRVCRDVASRRSLGYAYINFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I G+PIRIM+S RDP +RKSG GN+FIKNLD SIDNKAL DTF+ F
Sbjct: 63 ADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNLDDSIDNKALYDTFSTF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQV------------- 186
G +LSCKV D +G S+G+GFV FE EAA AI +NGML+ND++V
Sbjct: 123 GNILSCKVVCDEHG-SRGFGFVHFETREAASQAISTMNGMLLNDRKVGAQPCCPAGRVGS 181
Query: 187 ---------------------------------YVGLFVRRQERAQQNVSPKF------- 206
YVG +R ER Q + KF
Sbjct: 182 GKRPPSGRSRPAGPVPAQAVTSMNGKELNGRVLYVGRAQKRTER-QSELKRKFEQIKQER 240
Query: 207 ------TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
N+YV NL + + DE L+K F +GTITSA VM +S G S+ FGFV F SP+ A
Sbjct: 241 VNRYQGVNLYVKNLDDCIDDEKLRKEFSPYGTITSAKVMTES-GHSKGFGFVCFSSPEEA 299
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKL 307
AV ++NG + K YV AQ++ ER+A L ++ R+S L
Sbjct: 300 TKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQY-MHRLSTIRTL 345
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 121/336 (36%), Positives = 185/336 (55%), Gaps = 55/336 (16%)
Query: 113 SGY--GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAA 169
+GY ++++ +L + L + F+ G+++S +V D ++ +S GY ++ F+ A
Sbjct: 6 AGYPLASLYVGDLHVDVTEAMLYEKFSPAGSIISIRVCRDVASRRSLGYAYINFQQPADA 65
Query: 170 QNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGH 229
+ A+ +N +I + + + R + V N+++ NL +++ ++ L F
Sbjct: 66 ERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVG----NIFIKNLDDSIDNKALYDTFST 121
Query: 230 FGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDK-------------- 275
FG I S V+ D G SR FGFV+F++ +AA+ A+ +NG ND+
Sbjct: 122 FGNILSCKVVCDEHG-SRGFGFVHFETREAASQAISTMNGMLLNDRKVGAQPCCPAGRVG 180
Query: 276 --------------------------------VWYVGRAQKRAEREADLRAKFEQERISR 303
V YVGRAQKR ER+++L+ KFEQ + R
Sbjct: 181 SGKRPPSGRSRPAGPVPAQAVTSMNGKELNGRVLYVGRAQKRTERQSELKRKFEQIKQER 240
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEA 363
+ +G NLY+KNLDD I+DEKL++ FS +GTITS KVM + G SKG GF FS PEEA
Sbjct: 241 VNRYQGVNLYVKNLDDCIDDEKLRKEFSPYGTITSAKVMTES-GHSKGFGFVCFSSPEEA 299
Query: 364 TRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQF 399
T+A+ EMNG+++ KPLYVA+AQRKEERKA L Q+
Sbjct: 300 TKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQY 335
>gi|401423147|ref|XP_003876060.1| putative poly(A)-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492301|emb|CBZ27575.1| putative poly(A)-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 544
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 159/398 (39%), Positives = 233/398 (58%), Gaps = 19/398 (4%)
Query: 29 SLYVGDLEQNVN--ESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
S+YVGDL ++ E + +LFS VA VVSV+VCRD + + SLGY YVN+ P DA
Sbjct: 9 SVYVGDLPIDLPRPEEAINNLFSTVAPVVSVKVCRDMATQRSLGYGYVNFQTPADAEKVI 68
Query: 87 EALNFMPIN-GKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSC 145
+ALN+ I G+ IR+M+S RDP RKSG NVF+K LDT+++ K L F G VLSC
Sbjct: 69 DALNYTGITPGRQIRVMFSIRDPIQRKSGMNNVFVKKLDTAVNAKELQAAFTKCGRVLSC 128
Query: 146 KVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK 205
KVA+DS G SKGYGFVQFE + A+ A++M +G + D +V V F+RR +R + +
Sbjct: 129 KVALDSAGNSKGYGFVQFETADGAKAALEM-DGSKLGDCEVVVAPFLRRVDR-EVMAAKS 186
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
F N+Y+ NL TV + D+K FG + S + + + ++ F V F+ +AA A+
Sbjct: 187 FRNIYIKNLKATVAEADVKTTVETFGKVNSLFLSEHAPFPTK-FALVAFEEHEAAVKAIA 245
Query: 266 KLN-----GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
LN G T V RA ++ER+ E+++ + + G NLY+K+L D
Sbjct: 246 ALNESEESGLTEKAAKLVVCRALSKSERDR------EKKKAASLYQNHGRNLYVKHLPDD 299
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI--GRK 378
I D++L+E+F+ FG ITSC +M + +G KG F F + A+ AL +NG + +K
Sbjct: 300 ITDDRLREIFAPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAALRSLNGHSLDNSKK 359
Query: 379 PLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIP 416
LYV+ A++K+ R LQ + A +R M+P + P
Sbjct: 360 LLYVSQAEQKDMRIRLLQQRRAAMRHQSRMAPPMNTFP 397
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 553 LASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAE 612
L++ SP+ + LGE LY + +E +A+K+TGMLLEM + E+ ++ AL +K+ E
Sbjct: 474 LSTLSPEQQKNYLGELLYSRILPLESSNAAKITGMLLEMSREEIFEILGDQFALLSKIQE 533
Query: 613 AMAVLQE 619
A VLQ+
Sbjct: 534 ANVVLQQ 540
>gi|340386042|ref|XP_003391517.1| PREDICTED: polyadenylate-binding protein 1-like, partial
[Amphimedon queenslandica]
Length = 393
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 130/256 (50%), Positives = 183/256 (71%), Gaps = 1/256 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +VNE+ L+D FS+ V+S+ VCRD + SLGYAY+ + P DA A +
Sbjct: 12 SLYVGDLLPDVNEADLFDHFSKAGPVLSICVCRDLITKRSLGYAYIYFQQPADAERAFDT 71
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+N+ PI G+P IM+S RDPS+R+S G++FIKNL+ SID+KAL DTF+AFG +LSCKVA
Sbjct: 72 MNYEPIKGQPCYIMWSQRDPSLRRSRAGHIFIKNLERSIDHKALYDTFSAFGNILSCKVA 131
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
D NGQSKG GFV F+ +EAA AI+ +NG L+N+++V+VG F+ R++R+ + +TN
Sbjct: 132 TDLNGQSKGIGFVHFDEQEAADLAIEKVNGQLLNNRKVHVGKFIPRKDRSHTGFNQHYTN 191
Query: 209 -VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
V+V N E TDE L F FG+I +A+VMKD++G S+ FGFV+F+S +AA+AAV+ +
Sbjct: 192 VVFVKNFGEDFTDEMLYNFFEKFGSIAAAVVMKDNEGVSKDFGFVSFESHEAASAAVQAV 251
Query: 268 NGTTNNDKVWYVGRAQ 283
+ + N + Y RA
Sbjct: 252 HSSIVNGRQVYCSRAH 267
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 134/271 (49%), Gaps = 16/271 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L ++ L D F+ G VLS V D +S GY ++ F+ A+ A
Sbjct: 12 SLYVGDLLPDVNEADLFDHFSKAGPVLSICVCRDLITKRSLGYAYIYFQQPADAERAFDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N I + Y+ ++ +R +++ + ++++ NL ++ + L F FG I S
Sbjct: 72 MNYEPIKGQPCYI-MWSQRDPSLRRS---RAGHIFIKNLERSIDHKALYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V D +G+S+ GFV+F +AA A+EK+NG N++ +VG+ R +R
Sbjct: 128 CKVATDLNGQSKGIGFVHFDEQEAADLAIEKVNGQLLNNRKVHVGKFIPRKDRS---HTG 184
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
F Q Y + +++KN + DE L F +FG+I + VM D G SK GF
Sbjct: 185 FNQ----HYTNV----VFVKNFGEDFTDEMLYNFFEKFGSIAAAVVMKDNEGVSKDFGFV 236
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
+F E A+ A+ ++ ++ + +Y + A
Sbjct: 237 SFESHEAASAAVQAVHSSIVNGRQVYCSRAH 267
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 20/199 (10%)
Query: 204 PKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK-SRCFGFVNFQSPDAAAA 262
P ++YV +L V + DL F G + S V +D K S + ++ FQ P A
Sbjct: 8 PPLQSLYVGDLLPDVNEADLFDHFSKAGPVLSICVCRDLITKRSLGYAYIYFQQPADAER 67
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
A + +N + Y+ +Q R+ LR + + ++++KNL+ SI+
Sbjct: 68 AFDTMNYEPIKGQPCYIMWSQ----RDPSLR------------RSRAGHIFIKNLERSID 111
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
+ L + FS FG I SCKV D +G SKG GF F E A A+ ++NG+++ + ++V
Sbjct: 112 HKALYDTFSAFGNILSCKVATDLNGQSKGIGFVHFDEQEAADLAIEKVNGQLLNNRKVHV 171
Query: 383 AVAQRKEERKARLQAQFAQ 401
+ RK R F Q
Sbjct: 172 G---KFIPRKDRSHTGFNQ 187
>gi|355709043|gb|AES03462.1| poly binding protein, cytoplasmic 1 [Mustela putorius furo]
Length = 230
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 129/228 (56%), Positives = 164/228 (71%), Gaps = 3/228 (1%)
Query: 44 LYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMY 103
LY+ FS ++S+RVCRD R SLGYAYVN+ P DA A + +NF I GKP+RIM+
Sbjct: 1 LYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMW 60
Query: 104 SHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQF 163
S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LSCKV D NG SKGYGFV F
Sbjct: 61 SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHF 119
Query: 164 ENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDE 221
E +EAA+ AI+ +NGML+ND++V+VG F R+ER + + +FTNVY+ N E + DE
Sbjct: 120 ETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDE 179
Query: 222 DLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNG 269
LK +FG FG S VM D GKS+ FGFV+F+ + A AV+++NG
Sbjct: 180 RLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNG 227
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 140/243 (57%), Gaps = 16/243 (6%)
Query: 132 LCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L + F+ G +LS +V D +S GY +V F+ A+ A+ +N +I K V +
Sbjct: 1 LYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMW 60
Query: 191 FVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFG 250
R + V N+++ NL +++ ++ L F FG I S V+ D +G S+ +G
Sbjct: 61 SQRDPSLRKSGVG----NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYG 115
Query: 251 FVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGA 310
FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L A+ ++
Sbjct: 116 FVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKE----------FT 165
Query: 311 NLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEM 370
N+Y+KN + ++DE+LK+LF +FG S KVM D+ G SKG GF +F E+A +A++EM
Sbjct: 166 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 225
Query: 371 NGK 373
NGK
Sbjct: 226 NGK 228
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 26/173 (15%)
Query: 231 GTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDK----VWYVGRAQKR 285
G I S V +D +S + +VNFQ P A A++ +N K +W
Sbjct: 9 GPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMW-------- 60
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
++R+ LR K N+++KNLD SI+++ L + FS FG I SCKV+ D+
Sbjct: 61 SQRDPSLR------------KSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE 108
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQ 398
+G SKG GF F E A RA+ +MNG ++ + ++V + ++ER+A L A+
Sbjct: 109 NG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 160
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + +++++ +L DLF + +SV+V D+S +S G+ +V++ +DA A +
Sbjct: 165 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVD 223
Query: 88 ALN 90
+N
Sbjct: 224 EMN 226
>gi|67623121|ref|XP_667843.1| poly(a)-binding protein fabm [Cryptosporidium hominis TU502]
gi|54659004|gb|EAL37605.1| poly(a)-binding protein fabm [Cryptosporidium hominis]
Length = 746
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 154/376 (40%), Positives = 218/376 (57%), Gaps = 35/376 (9%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL+ +V E+ LY++F+ VA V SVR+CRD R SLGYAYVNY++ DA A +
Sbjct: 13 SLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERALDT 72
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF I G+P RIM+ RDP+ R++ GNVF+KNLD SIDNK L DTF+ FG ++SCK+A
Sbjct: 73 LNFTCIRGRPCRIMWCLRDPASRRNNDGNVFVKNLDKSIDNKTLFDTFSLFGNIMSCKIA 132
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
D G+S GYGF+ FE+ ++A+ AI LNG ++ D+ +YVG F ++ ER + FTN
Sbjct: 133 TDVEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPIYVGKFQKKAERFSEK-DKTFTN 191
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
VYV ++ ++ T++ L KIFG +G I+S ++ DS G R FGFVNF++PD+A AAV L
Sbjct: 192 VYVKHIPKSWTEDLLYKIFGVYGKISSLVLQSDSKG--RPFGFVNFENPDSAKAAVAAL- 248
Query: 269 GTTNNDKVWYVG-RAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
+N V VG AE AD A + E S+ E + +N ++ D
Sbjct: 249 ---HNALVTPVGVELDSTAETSADNEAGADSETSSKQESGEASNKKQTASSETSKD---- 301
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
S G+ F+ E+ + N R LYV+ AQ+
Sbjct: 302 ---------------------SSGTSNEEFAQNEDGSADKNVSADVQPNR--LYVSRAQK 338
Query: 388 KEERKARLQAQFAQIR 403
K ER+ L++Q ++
Sbjct: 339 KNERQVVLKSQHEAVK 354
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 196/691 (28%), Positives = 311/691 (45%), Gaps = 146/691 (21%)
Query: 26 GNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANA 85
GNV +V +L+++++ L+D FS ++S ++ D +S LGY ++++ + A A
Sbjct: 100 GNV--FVKNLDKSIDNKTLFDTFSLFGNIMSCKIATDVEGKS-LGYGFIHFEHADSAKEA 156
Query: 86 KEALNFMPINGKPIRI--------MYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFA 137
LN + +PI + +S +D + + NV++K++ S L F
Sbjct: 157 ISRLNGAVLGDRPIYVGKFQKKAERFSEKDKT-----FTNVYVKHIPKSWTEDLLYKIFG 211
Query: 138 AFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVR---- 193
+G + S + DS G + +GFV FEN ++A+ A+ L+ L+ V +
Sbjct: 212 VYGKISSLVLQSDSKG--RPFGFVNFENPDSAKAAVAALHNALVTPVGVELDSTAETSAD 269
Query: 194 RQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVN 253
+ A S K + +N +T + E K G ++ ++ DG
Sbjct: 270 NEAGADSETSSKQESGEASNKKQTASSETSKDSSG----TSNEEFAQNEDG--------- 316
Query: 254 FQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLY 313
S D +A + N YV RAQK+ ER+ L+++ E + S +++ +G NLY
Sbjct: 317 --SADKNVSADVQPN-------RLYVSRAQKKNERQVVLKSQHEAVKES-HQRYQGVNLY 366
Query: 314 LKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGK 373
+KNL DSIN+E L+ +F FGT++S + D+ G S+G GF +F P+EAT+A+ EM+ K
Sbjct: 367 VKNLADSINEEDLRSMFEPFGTVSSVSIKTDESGVSRGFGFVSFLSPDEATKAITEMHLK 426
Query: 374 MIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYH-----HGAP-RLG- 426
++ KPLYV + +RKE+R RLQ + IR G + P+ HGAP + G
Sbjct: 427 LVRGKPLYVGLHERKEQRALRLQQR---IRG-GAVPPVLRPGAIPPGPPGVHGAPMQFGV 482
Query: 427 PQQLYYGQG---------------------------------------TPGLMPPQAAG- 446
P Q+Y+ G T G +PPQ G
Sbjct: 483 PPQMYFIPGNPNVAATAMPHGRAMVTGGFPNQNAMNNPWRPNPTRMPYTAGGVPPQMTGG 542
Query: 447 -----------------------------YGFQQQVFPGL------RPGGPNY-IMPYHL 470
G PG+ R GG N I H+
Sbjct: 543 PQMTAYNGNVIQQNGVSPNGAANATGSVQNGVTGNAVPGVQGAQNNRTGGNNQRIHNRHV 602
Query: 471 QRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSG 530
Q G G R + HQ+QQ Q QG ++ N + Q V M + S
Sbjct: 603 Q-----GNGQGGRPGSHGHQVQQMQ-----KQGFKFPQNVKGSEMQRVDMMQNRQMDPSN 652
Query: 531 MPATPVETPRPVPVP-ISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
V+ P +P P + + LA+ASP + ++LGE+L+P++ +P A K+TGM+L
Sbjct: 653 --GALVQNPL-IPQPDVPLTAATLAAASPSMQKQLLGERLFPIIAQFQPELAGKITGMML 709
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEA 620
EMD E+L L+ S +K KV EAM VL+ A
Sbjct: 710 EMDNNELLELLSSDIEIKNKVDEAMVVLERA 740
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 198 AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQS 256
+ NV P ++YV +L VT+ L +IF ++S + +D+ +S + +VN+ S
Sbjct: 3 SNNNVVPVSASLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNS 62
Query: 257 PDAAAAAVEKLNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANL 312
A A++ LN T + +W + R + N+
Sbjct: 63 VADAERALDTLNFTCIRGRPCRIMWCLRDPASRRNND--------------------GNV 102
Query: 313 YLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNG 372
++KNLD SI+++ L + FS FG I SCK+ D G S G GF F + A A++ +NG
Sbjct: 103 FVKNLDKSIDNKTLFDTFSLFGNIMSCKIATDVEGKSLGYGFIHFEHADSAKEAISRLNG 162
Query: 373 KMIGRKPLYVAVAQRKEERKARLQAQFAQI 402
++G +P+YV Q+K ER + F +
Sbjct: 163 AVLGDRPIYVGKFQKKAERFSEKDKTFTNV 192
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LYV +L ++NE L +F V SV + D+S S G+ +V++ +P +A
Sbjct: 360 YQGVNLYVKNLADSINEEDLRSMFEPFGTVSSVSIKTDESGVSR-GFGFVSFLSPDEATK 418
Query: 85 AKEALNFMPINGKPIRIMYSHR 106
A ++ + GKP+ + R
Sbjct: 419 AITEMHLKLVRGKPLYVGLHER 440
>gi|294461458|gb|ADE76290.1| unknown [Picea sitchensis]
Length = 313
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 157/311 (50%), Positives = 205/311 (65%), Gaps = 17/311 (5%)
Query: 342 MVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ 401
M D HG SKGSGF AFS P+EA+RAL EMNGK++ KPLYVA+AQRKEER+ARLQAQF+Q
Sbjct: 1 MRDFHGHSKGSGFVAFSSPDEASRALAEMNGKIVVSKPLYVALAQRKEERRARLQAQFSQ 60
Query: 402 IRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPG 460
+R P GM+P + + +P Y G P L QQ++YGQG P L+PPQAAG+G+QQQ+ PG+RPG
Sbjct: 61 LRNPVGMAPAVPARVPMYPPGGPGLN-QQIFYGQGPPALIPPQAAGFGYQQQLIPGMRPG 119
Query: 461 G---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMR------NSNQGIRYLDNAR 511
PN+ +P +Q + Q QQ + N+ RY R
Sbjct: 120 SAPIPNFYLPLMQAQQGQRPGGRRGGVAPIQQQPQQQLPLLQQQMLPRGNRVYRY-PPGR 178
Query: 512 NGTDQSVVS----MVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGE 567
N + + M P+P ++ G+P ET P+PI L SALA+A+P+ + MLGE
Sbjct: 179 NVNEIPLSGVAGGMHPLPLDMGGLPLRAAETTISQPIPIGALASALANATPEQQRTMLGE 238
Query: 568 QLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAA-ARSDV 626
LYPLV+ +E HA+KVTGMLLEMDQTEVLHL+ESPEALK KVAEAM VL+ A+++
Sbjct: 239 SLYPLVDQLEHDHAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVTQAQANP 298
Query: 627 NEKLGSLAVNE 637
E+L +L++NE
Sbjct: 299 AEQLAALSLNE 309
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
M+D G S+ GFV F SPD A+ A+ ++NG K YV AQ++ ER A L+A+F Q
Sbjct: 1 MRDFHGHSKGSGFVAFSSPDEASRALAEMNGKIVVSKPLYVALAQRKEERRARLQAQFSQ 60
Query: 299 ER 300
R
Sbjct: 61 LR 62
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 150 DSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
D +G SKG GFV F + + A A+ +NG ++ K +YV L R++ER
Sbjct: 3 DFHGHSKGSGFVAFSSPDEASRALAEMNGKIVVSKPLYVALAQRKEER 50
>gi|449016981|dbj|BAM80383.1| polyadenylate-binding protein [Cyanidioschyzon merolae strain 10D]
Length = 999
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 167/408 (40%), Positives = 229/408 (56%), Gaps = 44/408 (10%)
Query: 1 MEATGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVC 60
+ A+GA A AA S T +P NVSLYVGDL+ +V E L++LFS V VVSVRVC
Sbjct: 154 LPASGATAVPAASASGT-GELP----NVSLYVGDLQPDVVEQNLFELFSSVGPVVSVRVC 208
Query: 61 RDQSKRSSLGYAYVNYSNPQDAANAKEALNFM--PIN-GKPIRIMYSHRDPSIRKSGYGN 117
RD R SLGYAYVN+ NP+DA A + L F P+ KPIRIM+ DPS R++ GN
Sbjct: 209 RDVVTRRSLGYAYVNFQNPEDAERAIDVLQFYEGPLTKNKPIRIMWKRSDPSQRRNPEGN 268
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLN 177
+FIKNLD SIDNKAL DTF+ FG VLSCK+A D G S GY FV +++ A+ I +N
Sbjct: 269 IFIKNLDKSIDNKALYDTFSTFGKVLSCKLATDDKGNSLGYAFVHYQDANVAKYVISKMN 328
Query: 178 GMLINDKQVYVGLFVRRQER-AQQNVSPKFTNVYVNNLAETV-TDEDLKKIFGHFGTITS 235
GML+N ++VYVG F R+ER A +S KFTNVYV NL E++ T E++ K+F +G ITS
Sbjct: 329 GMLLNGQKVYVGEFRPRREREATGELSTKFTNVYVKNLDESLCTTEEVTKLFAPYGNITS 388
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ ++ + + ++P A++ G ++ + V G Q A +
Sbjct: 389 IFIPTETVQEQQPHHEDEHRAPSEEASSEAGRQGGSSQE-VKSAGADQSNAAPD------ 441
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ E+ GA K ++ + + + V V GF+ F
Sbjct: 442 -----LETSERNDGA----KAPENRAHAQSV--------------VRVRPRGFA----FV 474
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
F PE+A A+ +NG + K LYV AQ+K ER+A L+AQ Q+R
Sbjct: 475 NFETPEQAAAAVEALNGMELNGKTLYVGRAQKKAEREAMLRAQMEQLR 522
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 216/383 (56%), Gaps = 37/383 (9%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
+++ +L+++++ LYD FS +V+S ++ D K +SLGYA+V+Y + A +
Sbjct: 269 IFIKNLDKSIDNKALYDTFSTFGKVLSCKLATDD-KGNSLGYAFVHYQDANVAKYVISKM 327
Query: 90 NFMPINGKPIRIMYSHRDPSIRKSGYG-------NVFIKNLDTSI-DNKALCDTFAAFGT 141
N M +NG+ ++ P + G NV++KNLD S+ + + FA +G
Sbjct: 328 NGMLLNGQ--KVYVGEFRPRREREATGELSTKFTNVYVKNLDESLCTTEEVTKLFAPYGN 385
Query: 142 VLSCKVAIDSNGQSKGYGFVQFE--NEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
+ S + ++ + + + + +EEA+ A +Q V+ Q
Sbjct: 386 ITSIFIPTETVQEQQPHHEDEHRAPSEEASSEA----------GRQGGSSQEVKSAGADQ 435
Query: 200 QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDA 259
N +P N+ A+ + H ++ + R F FVNF++P+
Sbjct: 436 SNAAPDLETSERNDGAKAPENR------AHAQSVVRV--------RPRGFAFVNFETPEQ 481
Query: 260 AAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDD 319
AAAAVE LNG N K YVGRAQK+AEREA LRA+ EQ R R +KL+ NL++KNL D
Sbjct: 482 AAAAVEALNGMELNGKTLYVGRAQKKAEREAMLRAQMEQLRNDRMQKLQDVNLFVKNLSD 541
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
+++ +L+E FS FGTITS ++M D+ G SKG GF AFS P+EA +A+ EMN +++G+KP
Sbjct: 542 DVDENRLREEFSRFGTITSLRIMRDEKGVSKGFGFVAFSHPDEAIKAVTEMNQRIVGQKP 601
Query: 380 LYVAVAQRKEERKARLQAQFAQI 402
+YVA+AQRK++R+A+++AQ A +
Sbjct: 602 IYVALAQRKDQRRAQIEAQRAAM 624
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 5/72 (6%)
Query: 553 LASASPDDRTRMLGEQLYPLV-----ENIEPVHASKVTGMLLEMDQTEVLHLIESPEALK 607
LA+A P + ++LGE+LYPLV + A K+TGMLLEMD +EVLHL+ESPEAL+
Sbjct: 899 LANADPKQQKQILGERLYPLVYQQLVREGKRELAPKITGMLLEMDNSEVLHLVESPEALQ 958
Query: 608 TKVAEAMAVLQE 619
KV EA+ VLQ+
Sbjct: 959 EKVEEALEVLQQ 970
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+V+L+V +L +V+E++L + FS+ + S+R+ RD+ K S G+ +V +S+P +A A
Sbjct: 531 DVNLFVKNLSDDVDENRLREEFSRFGTITSLRIMRDE-KGVSKGFGFVAFSHPDEAIKAV 589
Query: 87 EALNFMPINGKPIRIMYSHR 106
+N + KPI + + R
Sbjct: 590 TEMNQRIVGQKPIYVALAQR 609
>gi|330843410|ref|XP_003293648.1| hypothetical protein DICPUDRAFT_158538 [Dictyostelium purpureum]
gi|325076001|gb|EGC29827.1| hypothetical protein DICPUDRAFT_158538 [Dictyostelium purpureum]
Length = 735
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 149/367 (40%), Positives = 214/367 (58%), Gaps = 20/367 (5%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQ--VVSVRVCRDQSKRSSLGYAYVNYSNPQDAANA 85
SLYVGDL +VNE L +LFS+V + + S+ VCRD + SLGYAYVN+ N DA A
Sbjct: 120 TSLYVGDLASDVNEVVLNELFSKVGRNAIASIHVCRDSNTYRSLGYAYVNFYNNHDAERA 179
Query: 86 KEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSC 145
+ LN+ I+GKP RIM+S+RDP+ RK+ GNVF+KNL+ ++DN L D F++FG +LSC
Sbjct: 180 LDTLNYSMIHGKPCRIMWSYRDPTKRKTNVGNVFVKNLEKAVDNAMLYDVFSSFGNILSC 239
Query: 146 KVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK 205
KV + G SKGYG+V FE E++ AI+ +NG L+ K ++ FV + ER + V K
Sbjct: 240 KVEYEK-GISKGYGYVHFETSESSGKAIERINGTLVLGKPIFCEPFVAKVERYK--VENK 296
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQS-PDAAAAAV 264
V+ N E+VT E +++ FG I + DS GKS+ G V F++ DA
Sbjct: 297 ---VFFRNADESVTQEMIQEELSKFGEIEICTLKIDSTGKSKGLGTVEFKNCEDAQKLLA 353
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
+ + N K R + + ER +LR K + L+L N+D+SI E
Sbjct: 354 VEADSIQINGKPITFDRVKNKIERVTELRKKTTDQ-----------TLFLSNIDESIEKE 402
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
+KE FS+ G I CK++ D+ G +KG GF FS EA +AL +NG G K + V++
Sbjct: 403 TIKEEFSKHGAIIGCKIVQDESGKNKGYGFITFSEVSEANKALEALNGFTFGNKQITVSL 462
Query: 385 AQRKEER 391
+ KE++
Sbjct: 463 SSNKEQQ 469
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFG--TITSCKVMVDQHGF-SKGSGFAAFSMP 360
Y+ + +LY+ +L +N+ L ELFS+ G I S V D + + S G + F
Sbjct: 114 YQPSQLTSLYVGDLASDVNEVVLNELFSKVGRNAIASIHVCRDSNTYRSLGYAYVNFYNN 173
Query: 361 EEATRALNEMNGKMIGRKPLYVAVAQR 387
+A RAL+ +N MI KP + + R
Sbjct: 174 HDAERALDTLNYSMIHGKPCRIMWSYR 200
>gi|106879567|emb|CAJ38367.1| polyA-binding protein [Plantago major]
Length = 314
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 161/323 (49%), Positives = 209/323 (64%), Gaps = 33/323 (10%)
Query: 335 TITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKAR 394
TITSCKVM D G S+GSGF AFS PEE+ RAL+EMNGKM+ KPLYVA+AQRKEER+AR
Sbjct: 1 TITSCKVMRDPSGISRGSGFVAFSTPEESARALSEMNGKMVISKPLYVALAQRKEERRAR 60
Query: 395 LQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQV 453
LQAQF+Q+R P M P +A +P Y GAP +G QQL+YGQG P ++P Q AG+G+QQQ+
Sbjct: 61 LQAQFSQMR-PVAMPPSIAPRMPMYPPGAPGIG-QQLFYGQGPPAMIPSQ-AGFGYQQQL 117
Query: 454 FPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQ------PQFMRNSNQGI 504
PG+RPGG PN+ MP Q Q MQQ + +G
Sbjct: 118 VPGMRPGGTPMPNFFMPMVQQGQQG----QRPGGRRGGGPMQQAQQPVPVMQQQMMPRGR 173
Query: 505 RY-LDNARNGTDQSVV--SMVPVPFEVSGMPATPVETPR-----PVPVPISTLTSALASA 556
Y RN D + M VP++++GM PR P P+P++ L SALA+A
Sbjct: 174 MYRFPPGRNVPDVPMTGGGMFSVPYDMTGM------LPRDAAAIPQPMPVTALASALANA 227
Query: 557 SPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAV 616
+P+ + MLGE LYPLV+ +E HA+KVTGMLLEMDQTEVLHL+ESP+ALK+KV EAM V
Sbjct: 228 TPEQQRTMLGENLYPLVDQLEHEHAAKVTGMLLEMDQTEVLHLLESPDALKSKVNEAMEV 287
Query: 617 LQEAAARSDVN--EKLGSLAVNE 637
L+ + + + ++L SL++N+
Sbjct: 288 LRNVQQQGNNSPADQLASLSLND 310
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%)
Query: 232 TITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
TITS VM+D G SR GFV F +P+ +A A+ ++NG K YV AQ++ ER A
Sbjct: 1 TITSCKVMRDPSGISRGSGFVAFSTPEESARALSEMNGKMVISKPLYVALAQRKEERRAR 60
Query: 292 LRAKFEQER 300
L+A+F Q R
Sbjct: 61 LQAQFSQMR 69
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
T+ SCKV D +G S+G GFV F E + A+ +NG ++ K +YV L R++ER
Sbjct: 1 TITSCKVMRDPSGISRGSGFVAFSTPEESARALSEMNGKMVISKPLYVALAQRKEER 57
>gi|126649325|ref|XP_001388334.1| poly(a)-binding protein fabm [Cryptosporidium parvum Iowa II]
gi|32398879|emb|CAD98589.1| putative poly(a)-binding protein fabm, possible [Cryptosporidium
parvum]
gi|126117428|gb|EAZ51528.1| poly(a)-binding protein fabm, putative [Cryptosporidium parvum Iowa
II]
Length = 746
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 136/284 (47%), Positives = 187/284 (65%), Gaps = 8/284 (2%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL+ +V E+ LY++F+ VA V SVR+CRD R SLGYAYVNY++ DA A +
Sbjct: 13 SLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERALDT 72
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF I G+P RIM+ RDP+ R++ GNVF+KNLD SIDNK L DTF+ FG ++SCK+A
Sbjct: 73 LNFTCIRGRPCRIMWCLRDPASRRNNDGNVFVKNLDKSIDNKTLFDTFSLFGNIMSCKIA 132
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
D G+S GYGF+ FE+ ++A+ AI LNG ++ D+ +YVG F ++ ER + FTN
Sbjct: 133 TDVEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPIYVGKFQKKAERFSEK-DKTFTN 191
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
VYV ++ ++ T++ L KIFG +G I+S ++ DS G R FGFVNF++PD+A AAV L
Sbjct: 192 VYVKHIPKSWTEDLLYKIFGVYGKISSLVLQSDSKG--RPFGFVNFENPDSAKAAVAAL- 248
Query: 269 GTTNNDKVWYVG-RAQKRAEREADLRAKFEQERISRYEKLKGAN 311
+N V VG AE D A + E S+ E + +N
Sbjct: 249 ---HNALVTPVGVELDSTAETPVDNEAGADSETSSKQESGEASN 289
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 131/434 (30%), Positives = 213/434 (49%), Gaps = 58/434 (13%)
Query: 26 GNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANA 85
GNV +V +L+++++ L+D FS ++S ++ D +S LGY ++++ + A A
Sbjct: 100 GNV--FVKNLDKSIDNKTLFDTFSLFGNIMSCKIATDVEGKS-LGYGFIHFEHADSAKEA 156
Query: 86 KEALNFMPINGKPIRI--------MYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFA 137
LN + +PI + +S +D + + NV++K++ S L F
Sbjct: 157 ISRLNGAVLGDRPIYVGKFQKKAERFSEKDKT-----FTNVYVKHIPKSWTEDLLYKIFG 211
Query: 138 AFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF----VR 193
+G + S + DS G + +GFV FEN ++A+ A+ L+ L+ V + V
Sbjct: 212 VYGKISSLVLQSDSKG--RPFGFVNFENPDSAKAAVAALHNALVTPVGVELDSTAETPVD 269
Query: 194 RQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVN 253
+ A S K + +N +T + E KDS G S N
Sbjct: 270 NEAGADSETSSKQESGEASNKKQTASGE----------------ASKDSSGTS------N 307
Query: 254 FQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLY 313
+S + +K YV RAQK+ ER+ L+++ E + S +++ +G NLY
Sbjct: 308 EESAQNEDGSADKNVSADVQPNRLYVSRAQKKNERQVVLKSQHEAVKES-HQRYQGVNLY 366
Query: 314 LKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGK 373
+KNL DSIN+E L+ +F FGT++S + D+ G S+G GF +F P+EAT+A+ EM+ K
Sbjct: 367 VKNLADSINEEDLRSMFEPFGTVSSVSIKTDESGVSRGFGFVSFLSPDEATKAITEMHLK 426
Query: 374 MIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSP------LASGIPGYHHGAP-RLG 426
++ KPLYV + +RKE+R RLQ R GG P P HGAP + G
Sbjct: 427 LVRGKPLYVGLHERKEQRALRLQQ-----RIRGGAVPPVLRPGAIPPGPPGVHGAPMQFG 481
Query: 427 -PQQLYYGQGTPGL 439
P Q+Y+ G P +
Sbjct: 482 VPPQMYFIPGNPNV 495
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 198 AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQS 256
+ NV P ++YV +L VT+ L +IF ++S + +D+ +S + +VN+ S
Sbjct: 3 SNNNVVPVSASLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNS 62
Query: 257 PDAAAAAVEKLNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANL 312
A A++ LN T + +W + R + N+
Sbjct: 63 VADAERALDTLNFTCIRGRPCRIMWCLRDPASRRNND--------------------GNV 102
Query: 313 YLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNG 372
++KNLD SI+++ L + FS FG I SCK+ D G S G GF F + A A++ +NG
Sbjct: 103 FVKNLDKSIDNKTLFDTFSLFGNIMSCKIATDVEGKSLGYGFIHFEHADSAKEAISRLNG 162
Query: 373 KMIGRKPLYVAVAQRKEERKARLQAQFAQI 402
++G +P+YV Q+K ER + F +
Sbjct: 163 AVLGDRPIYVGKFQKKAERFSEKDKTFTNV 192
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 85/165 (51%), Gaps = 15/165 (9%)
Query: 458 RPGGPNY-IMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQ 516
R GG N I H+Q G G R + HQ+QQ Q QG ++ N + Q
Sbjct: 589 RTGGNNQRIHNRHVQ-----GNGQGGRPGSHGHQVQQMQ-----KQGFKFPQNVKGSEMQ 638
Query: 517 SVVSMVPVPFEVSGMPATPVETPRPVPVP-ISTLTSALASASPDDRTRMLGEQLYPLVEN 575
V M + S V+ P +P P + + LA+ASP + ++LGE+L+P++
Sbjct: 639 RVDMMQNRQMDSSN--GALVQNPL-IPQPDVPLTAATLAAASPSMQKQLLGERLFPIIAQ 695
Query: 576 IEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEA 620
+P A K+TGM+LEMD E+L L+ S +K KV EAM VL+ A
Sbjct: 696 FQPELAGKITGMMLEMDNNELLELLSSDIEIKNKVDEAMVVLERA 740
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LYV +L ++NE L +F V SV + D+S S G+ +V++ +P +A
Sbjct: 360 YQGVNLYVKNLADSINEEDLRSMFEPFGTVSSVSIKTDESGVSR-GFGFVSFLSPDEATK 418
Query: 85 AKEALNFMPINGKPIRIMYSHR 106
A ++ + GKP+ + R
Sbjct: 419 AITEMHLKLVRGKPLYVGLHER 440
>gi|294877113|ref|XP_002767904.1| protein HSH49, putative [Perkinsus marinus ATCC 50983]
gi|239869872|gb|EER00622.1| protein HSH49, putative [Perkinsus marinus ATCC 50983]
Length = 289
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/242 (52%), Positives = 174/242 (71%), Gaps = 5/242 (2%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLY GDL +VNE+ LY++F+ + V S+RVCRD R SLGYAY+N+ N DA A +
Sbjct: 50 SLYAGDLAPDVNEAVLYEVFNGIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERALDT 109
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LN+ PING+P R+M+SHRDP++R+SG GNV++KNLD +IDNKAL DTF+ FG +LSCKVA
Sbjct: 110 LNYSPINGRPCRLMWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFGNILSCKVA 169
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK-FT 207
+ +G+S+G+GFV FE++E+A+ AI LNGM I +K VYV F + +R+ SPK FT
Sbjct: 170 LTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVAQFKKTADRSDG--SPKNFT 227
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NVY+ ++ + T+E +++ FG FG ITS + +D K R F FVNF + A AAVE +
Sbjct: 228 NVYIKHIPPSWTEEKIREEFGAFGEITSFAMQ--TDPKGRRFAFVNFAEFEQARAAVEDM 285
Query: 268 NG 269
+G
Sbjct: 286 DG 287
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 130/260 (50%), Gaps = 20/260 (7%)
Query: 115 YGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAI 173
+ +++ +L ++ L + F G V S +V DS +S GY ++ F N A+ A+
Sbjct: 48 FASLYAGDLAPDVNEAVLYEVFNGIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERAL 107
Query: 174 KMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTI 233
LN IN + + ++ R +++ + NVYV NL + ++ L F FG I
Sbjct: 108 DTLNYSPINGRPCRL-MWSHRDPALRRSGA---GNVYVKNLDRNIDNKALYDTFSLFGNI 163
Query: 234 TSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLR 293
S V DGKSR FGFV+F+S ++A AA+ KLNG +K YV + +K A+R
Sbjct: 164 LSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVAQFKKTADRSDGSP 223
Query: 294 AKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSG 353
F N+Y+K++ S +EK++E F FG ITS + D G +
Sbjct: 224 KNF-------------TNVYIKHIPPSWTEEKIREEFGAFGEITSFAMQTDPKG--RRFA 268
Query: 354 FAAFSMPEEATRALNEMNGK 373
F F+ E+A A+ +M+G+
Sbjct: 269 FVNFAEFEQARAAVEDMDGE 288
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 25/203 (12%)
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAA 263
+F ++Y +LA V + L ++F G + S V +DS KS + ++NF + A A
Sbjct: 47 QFASLYAGDLAPDVNEAVLYEVFNGIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERA 106
Query: 264 VEKLNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDD 319
++ LN + N + +W + R+ LR + N+Y+KNLD
Sbjct: 107 LDTLNYSPINGRPCRLMW--------SHRDPALR------------RSGAGNVYVKNLDR 146
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
+I+++ L + FS FG I SCKV + G S+G GF F E A A+ ++NG IG K
Sbjct: 147 NIDNKALYDTFSLFGNILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKT 206
Query: 380 LYVAVAQRKEERKARLQAQFAQI 402
+YVA ++ +R F +
Sbjct: 207 VYVAQFKKTADRSDGSPKNFTNV 229
>gi|111226286|ref|XP_001134510.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|122096694|sp|Q1ZXC2.1|PAP1B_DICDI RecName: Full=Polyadenylate-binding protein 1-B; Short=PABP-1-B;
Short=Poly(A)-binding protein, cytoplasmic 1-B
gi|90970453|gb|EAS66827.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 814
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 147/381 (38%), Positives = 225/381 (59%), Gaps = 38/381 (9%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQ--VVSVRVCRDQSKRSSLGYAYVNYSNPQDAANA 85
SLYVGDL +VNE L +LFS+V + + S+ VCRD + SLGYAYVN+ N DA A
Sbjct: 184 TSLYVGDLAADVNEIILNELFSKVGRNAIASIHVCRDSNTLRSLGYAYVNFFNNHDAERA 243
Query: 86 KEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSC 145
+ LN+ ++GKP RIM+S+RDP+ RK+ GN+F+KNL+ +DN L DTF++FG +LSC
Sbjct: 244 LDTLNYTLVHGKPCRIMWSYRDPTKRKTNVGNIFVKNLEKGVDNAMLYDTFSSFGNILSC 303
Query: 146 KVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK 205
KV + G SKGYG+V FE ++A+ AI+ +NG LI K + V FV + ER + V K
Sbjct: 304 KVEFEK-GISKGYGYVHFETNDSAEKAIEKVNGTLILGKPINVERFVSKVERYK--VENK 360
Query: 206 FTNVYVNNLAETVTDEDLKK-IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA---- 260
V+ N E++T E L++ + FG I S I+ D++GKS+ G V F++ + A
Sbjct: 361 ---VFFRNADESITIEILQQELSNRFGEIESCILKNDANGKSKGLGLVEFKNQEDAQKIL 417
Query: 261 ----AAAVEKLNGTTN----------NDKVWYVGRAQKRAEREADLRAKFEQERISRYEK 306
A + ++GTT N K + R + + ER + R +K
Sbjct: 418 TESGALIISTIDGTTTVSSNGGTIEINGKPITIDRIKSKVERFTEYR-----------KK 466
Query: 307 LKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRA 366
+L++ N+D+SI+ + +KE F++ GTI K++ D++ +KG GF +FS +EA +A
Sbjct: 467 TTDLSLFINNIDESIDRDLIKEEFAKHGTIIGIKIVQDENARNKGFGFISFSEIQEAQKA 526
Query: 367 LNEMNGKMIGRKPLYVAVAQR 387
L+ +NG G K + V+ + +
Sbjct: 527 LDSLNGFTFGSKQIQVSFSNK 547
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 28/194 (14%)
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFG--TITSAIVMKDSDG-KSRCFGFVNFQSPDAAA 261
+ T++YV +LA V + L ++F G I S V +DS+ +S + +VNF + A
Sbjct: 182 QLTSLYVGDLAADVNEIILNELFSKVGRNAIASIHVCRDSNTLRSLGYAYVNFFNNHDAE 241
Query: 262 AAVEKLNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
A++ LN T + K +W KR K N+++KNL
Sbjct: 242 RALDTLNYTLVHGKPCRIMWSYRDPTKR--------------------KTNVGNIFVKNL 281
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGR 377
+ +++ L + FS FG I SCKV ++ G SKG G+ F + A +A+ ++NG +I
Sbjct: 282 EKGVDNAMLYDTFSSFGNILSCKVEFEK-GISKGYGYVHFETNDSAEKAIEKVNGTLILG 340
Query: 378 KPLYVAVAQRKEER 391
KP+ V K ER
Sbjct: 341 KPINVERFVSKVER 354
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/81 (19%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
++SL++ +++++++ + + F++ ++ +++ +D++ R+ G+ ++++S Q+A A
Sbjct: 469 DLSLFINNIDESIDRDLIKEEFAKHGTIIGIKIVQDENARNK-GFGFISFSEIQEAQKAL 527
Query: 87 EALNFMPINGKPIRIMYSHRD 107
++LN K I++ +S++D
Sbjct: 528 DSLNGFTFGSKQIQVSFSNKD 548
>gi|281204064|gb|EFA78260.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 617
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 149/413 (36%), Positives = 224/413 (54%), Gaps = 49/413 (11%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQ--VVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
SLYVGDL +VNE L +LFS+V + V S+ VCRD SLGYAYVN+ N DA A
Sbjct: 139 SLYVGDLAPDVNEIMLSELFSKVGRSAVASIHVCRDSITFRSLGYAYVNFFNSIDAERAL 198
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
+ LN+ I G+P RIM+S RDP+ RKS GN+F+KNLD +DN L DTF+ FG +LSCK
Sbjct: 199 DTLNYSQIMGRPCRIMWSLRDPTKRKSNVGNIFVKNLDKQVDNAMLFDTFSKFGNILSCK 258
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF 206
+ + G SKGYG+V FE +E++ AI+ +NG ++ K + V FV + ER ++ K
Sbjct: 259 IEYEK-GVSKGYGYVHFETQESSDRAIQGVNGTMLCGKPITVEQFVSKVERFKEKNEHK- 316
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
+++ N+ E T E L+ FG I S I+ D++GKS+ GFV F+S + A ++
Sbjct: 317 --LFIKNIDELATVEQLQAELSRFGEIESCIIRLDNNGKSKGLGFVEFKSVEDAQRLMDN 374
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLK------------------ 308
K + R + + ER + R +Q+
Sbjct: 375 PEPIQILSKPITIDRIKNKMERNIEHRQIKQQQANGNPNNNNNVVNNSTAPTVAATTTTT 434
Query: 309 -----------------------GANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
L++ N+D+SI+ E ++E F++ GTI K+ V +
Sbjct: 435 TTTVDSNGNPTNSSNNNNSVAPTNLTLFIHNIDESIDKEVIREEFAKHGTILGIKI-VQE 493
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRK-EERKARLQA 397
+G ++G GF ++S EEA A+ +MNG ++G KPL V+ + RK ++R +LQ+
Sbjct: 494 NGKNRGFGFLSYSTQEEANIAIEKMNGFILGSKPLSVSFSNRKYKKRMQQLQS 546
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 136/285 (47%), Gaps = 29/285 (10%)
Query: 113 SGYGNVFIKNLDTSIDNKALCDTFAAFG--TVLSCKVAIDS-NGQSKGYGFVQFENEEAA 169
S Y ++++ +L ++ L + F+ G V S V DS +S GY +V F N A
Sbjct: 135 SQYTSLYVGDLAPDVNEIMLSELFSKVGRSAVASIHVCRDSITFRSLGYAYVNFFNSIDA 194
Query: 170 QNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGH 229
+ A+ LN I + + +R + + NV N++V NL + V + L F
Sbjct: 195 ERALDTLNYSQIMGRPCRIMWSLRDPTKRKSNVG----NIFVKNLDKQVDNAMLFDTFSK 250
Query: 230 FGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAERE 289
FG I S + + G S+ +G+V+F++ +++ A++ +NGT K V
Sbjct: 251 FGNILSCKIEYEK-GVSKGYGYVHFETQESSDRAIQGVNGTMLCGKPITV---------- 299
Query: 290 ADLRAKFEQERISRYEKLKGAN---LYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH 346
++ +S+ E+ K N L++KN+D+ E+L+ S FG I SC + +D +
Sbjct: 300 --------EQFVSKVERFKEKNEHKLFIKNIDELATVEQLQAELSRFGEIESCIIRLDNN 351
Query: 347 GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEER 391
G SKG GF F E+A R ++ I KP+ + + K ER
Sbjct: 352 GKSKGLGFVEFKSVEDAQRLMDNPEPIQILSKPITIDRIKNKMER 396
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/80 (18%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
N++L++ ++++++++ + + F++ ++ +++ ++ K G+ +++YS ++A A
Sbjct: 458 NLTLFIHNIDESIDKEVIREEFAKHGTILGIKIVQENGKNR--GFGFLSYSTQEEANIAI 515
Query: 87 EALNFMPINGKPIRIMYSHR 106
E +N + KP+ + +S+R
Sbjct: 516 EKMNGFILGSKPLSVSFSNR 535
>gi|62751624|ref|NP_001015753.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Xenopus
(Silurana) tropicalis]
gi|58476781|gb|AAH89689.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Xenopus
(Silurana) tropicalis]
Length = 217
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 126/217 (58%), Positives = 152/217 (70%), Gaps = 5/217 (2%)
Query: 18 TAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYS 77
TAA S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+
Sbjct: 3 TAA--SSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ 60
Query: 78 NPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFA 137
P DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+
Sbjct: 61 QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS 120
Query: 138 AFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF-VRRQE 196
AFG +LSCKV D NG SKGY FV FE ++AA AI+ +NGML+ND++V+VG F RR+
Sbjct: 121 AFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKCRRER 179
Query: 197 RAQQNVSPK-FTNVYVNNLAETVTDEDLKKIFGHFGT 232
A+ K FTNVY+ N E + DE LK+ F +G
Sbjct: 180 EAELGAKAKEFTNVYIKNFGEDMDDERLKETFSKYGC 216
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 120/221 (54%), Gaps = 16/221 (7%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIK 174
++++ +L + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 175 MLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTIT 234
+N +I K + + R + V NV++ NL +++ ++ L F FG I
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKALYDTFSAFGNIL 126
Query: 235 SAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRA 294
S V+ D +G S+ + FV+F++ DAA A+EK+NG ND+ +VGR + R EREA+L A
Sbjct: 127 SCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKCRREREAELGA 185
Query: 295 KFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGT 335
K ++ N+Y+KN + ++DE+LKE FS++G
Sbjct: 186 KAKE----------FTNVYIKNFGEDMDDERLKETFSKYGC 216
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 26/196 (13%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G + S V +D +S + +VNFQ P A A++
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 267 LNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
+N K +W ++R+ LR K N+++KNLD SI+
Sbjct: 72 MNFDVIKGKPIRIMW--------SQRDPSLR------------KSGVGNVFIKNLDKSID 111
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
++ L + FS FG I SCKV+ D++G SKG F F + A RA+ +MNG ++ + ++V
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFV 170
Query: 383 AVAQRKEERKARLQAQ 398
+ + ER+A L A+
Sbjct: 171 GRFKCRREREAELGAK 186
>gi|328876647|gb|EGG25010.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 748
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 215/391 (54%), Gaps = 36/391 (9%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQ--VVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
SLYVGDL Q VNE L +LFS+V + V S+ VCRD + SLGYAYVN+ N DA A
Sbjct: 131 SLYVGDLSQEVNELILAELFSKVGRTAVASIHVCRDSATLRSLGYAYVNFYNSVDAERAL 190
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
+ LN+ I G+P RIM+SHRDP+ RKS GN+F+KNL+ ++DN L DTF+ +G +LSCK
Sbjct: 191 DTLNYSLILGRPCRIMWSHRDPTKRKSNVGNIFVKNLEKNVDNALLFDTFSTYGNILSCK 250
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF 206
+ + G SKGYG+V FEN+E+++ AI +NG ++ K + V FV + ER ++ +
Sbjct: 251 IEYEK-GISKGYGYVHFENQESSEQAILKVNGTILLGKPIIVEPFVSKVERFKEKKNE-- 307
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
+++ N+ E VT E L++ FG I S + D GK + FV F++ + A A +E
Sbjct: 308 NKLFIKNIDENVTSEMLQQELSRFGEIESCNIRTDPTGKPKGLAFVEFKTSEDAQALLES 367
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAK-------------------------FEQERI 301
T K R + + ER + K +Q
Sbjct: 368 TEAITILSKQITFDRIKNKVERSIEKNQKLINELNNNNNNHNNNNINHHINSSSLQQNGS 427
Query: 302 SRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPE 361
+ ++ + L++ N+D ++ E ++E F++ G I K+ S+G F +S E
Sbjct: 428 TSQQQQQNLTLFINNIDMEVDKEIIREEFAKHGNILGIKIK------SRGFAFLTYSTQE 481
Query: 362 EATRALNEMNGKMIGRKPLYVAVAQRKEERK 392
EA A+ +MNG + G K L V+++ ++E++
Sbjct: 482 EAAVAIEKMNGYVFGTKALVVSLSNSRKEKR 512
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 24/195 (12%)
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFG--TITSAIVMKDSDG-KSRCFGFVNFQSPDAAA 261
+FT++YV +L++ V + L ++F G + S V +DS +S + +VNF + A
Sbjct: 128 QFTSLYVGDLSQEVNELILAELFSKVGRTAVASIHVCRDSATLRSLGYAYVNFYNSVDAE 187
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
A++ LN + +GR + D + K N+++KNL+ ++
Sbjct: 188 RALDTLNYS------LILGRPCRIMWSHRDPTKR----------KSNVGNIFVKNLEKNV 231
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL- 380
++ L + FS +G I SCK+ ++ G SKG G+ F E + +A+ ++NG ++ KP+
Sbjct: 232 DNALLFDTFSTYGNILSCKIEYEK-GISKGYGYVHFENQESSEQAILKVNGTILLGKPII 290
Query: 381 ---YVAVAQRKEERK 392
+V+ +R +E+K
Sbjct: 291 VEPFVSKVERFKEKK 305
>gi|318087158|gb|ADV40171.1| putative polyA binding protein cytoplasmic 1 isoform 1 [Latrodectus
hesperus]
Length = 217
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 118/210 (56%), Positives = 150/210 (71%), Gaps = 4/210 (1%)
Query: 22 PSG--YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
P+G Y SLYVGDL +V E+ L++ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 5 PNGPNYPVASLYVGDLHNDVTEAMLFEKFSSAGPVLSIRVCRDLIARRSLGYAYVNFQQP 64
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF + G+PIRIM+S RDPS+RKSG GNVFIKNLD SIDNKA+ DTF+AF
Sbjct: 65 VDAERALDTMNFDMVKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 124
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKVA D SKGYGFV FE EEAA NAI+ +NGML+N ++V+VG FV R ER +
Sbjct: 125 GNILSCKVATDEESNSKGYGFVHFETEEAANNAIQKVNGMLLNGRKVFVGKFVPRSEREK 184
Query: 200 Q--NVSPKFTNVYVNNLAETVTDEDLKKIF 227
Q + +F NVY+ N + + DE L+++
Sbjct: 185 QLGQKARRFMNVYIKNFGDDLDDEKLREML 214
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 112/214 (52%), Gaps = 15/214 (7%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQ-SKGYGFVQFENEEAAQNAIKML 176
+++ +L + L + F++ G VLS +V D + S GY +V F+ A+ A+ +
Sbjct: 15 LYVGDLHNDVTEAMLFEKFSSAGPVLSIRVCRDLIARRSLGYAYVNFQQPVDAERALDTM 74
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSA 236
N ++ + + + R + V NV++ NL +++ ++ + F FG I S
Sbjct: 75 NFDMVKGRPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKAMYDTFSAFGNILSC 130
Query: 237 IVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKF 296
V D + S+ +GFV+F++ +AA A++K+NG N + +VG+ R+ERE L
Sbjct: 131 KVATDEESNSKGYGFVHFETEEAANNAIQKVNGMLLNGRKVFVGKFVPRSEREKQL---- 186
Query: 297 EQERISRYEKLKGANLYLKNLDDSINDEKLKELF 330
++ R+ N+Y+KN D ++DEKL+E+
Sbjct: 187 -GQKARRF-----MNVYIKNFGDDLDDEKLREML 214
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 21/190 (11%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK-SRCFGFVNFQSPDAAAAAVEKL 267
+YV +L VT+ L + F G + S V +D + S + +VNFQ P A A++
Sbjct: 15 LYVGDLHNDVTEAMLFEKFSSAGPVLSIRVCRDLIARRSLGYAYVNFQQPVDAERALD-- 72
Query: 268 NGTTNNDKVWYVGRAQK--RAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
T N D V GR + ++R+ LR K N+++KNLD SI+++
Sbjct: 73 --TMNFDMV--KGRPIRIMWSQRDPSLR------------KSGVGNVFIKNLDKSIDNKA 116
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
+ + FS FG I SCKV D+ SKG GF F E A A+ ++NG ++ + ++V
Sbjct: 117 MYDTFSAFGNILSCKVATDEESNSKGYGFVHFETEEAANNAIQKVNGMLLNGRKVFVGKF 176
Query: 386 QRKEERKARL 395
+ ER+ +L
Sbjct: 177 VPRSEREKQL 186
>gi|340056243|emb|CCC50573.1| putative polyadenylate-binding protein 1 [Trypanosoma vivax Y486]
Length = 482
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 135/313 (43%), Positives = 187/313 (59%), Gaps = 26/313 (8%)
Query: 102 MYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFV 161
M+ RDP++R SG GN+F+KNL +D++ L F FG +LSCKV D G+S+GYGFV
Sbjct: 1 MWQQRDPALRYSGNGNIFVKNLKGEVDSRELSVIFKRFGEILSCKVMSDEGGRSRGYGFV 60
Query: 162 QFENEEAAQNAIKMLNGMLINDKQ--------VYVGLFVRRQERAQQNVSPKFTNVYVNN 213
F+++ AA+NAI+ +NG DK+ +YV F+RR R V+ FTNVY+
Sbjct: 61 HFKDDTAAKNAIESMNG----DKEHADAAKAALYVANFIRRNARLAALVA-NFTNVYIKQ 115
Query: 214 LAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN----- 268
L TV + ++K F FG ITSA KD +G R F F NF+ D A A+E +
Sbjct: 116 LLPTVNKDTIEKFFSKFGGITSAATCKDKNG--RAFAFCNFEKHDDAVKAIEAFHDQVIE 173
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G T + YV RAQ R+ER LR K+ Q + L G NLY++N D +++ L
Sbjct: 174 GVTPPGEKLYVQRAQPRSERLIALRQKYMQ-----CQSL-GNNLYVRNFDVEFSEKDLHV 227
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRK 388
LF E+GTI SC+VM D +G S+G GF +F ++A AL EMNG+M+ KPL V +AQR+
Sbjct: 228 LFEEYGTIRSCRVMTDANGNSRGFGFVSFENADQANAALREMNGRMLNGKPLIVNIAQRR 287
Query: 389 EERKARLQAQFAQ 401
++R L+ QF Q
Sbjct: 288 DQRFMMLRVQFQQ 300
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 102/198 (51%), Gaps = 20/198 (10%)
Query: 15 SATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYV 74
+A AA+ + + NV Y+ L VN+ + FS+ + S C+D++ R+ +A+
Sbjct: 98 NARLAALVANFTNV--YIKQLLPTVNKDTIEKFFSKFGGITSAATCKDKNGRA---FAFC 152
Query: 75 NYSNPQDAANAKEALNFMPING--KPIRIMY-------SHRDPSIR------KSGYGNVF 119
N+ DA A EA + I G P +Y S R ++R +S N++
Sbjct: 153 NFEKHDDAVKAIEAFHDQVIEGVTPPGEKLYVQRAQPRSERLIALRQKYMQCQSLGNNLY 212
Query: 120 IKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGM 179
++N D K L F +GT+ SC+V D+NG S+G+GFV FEN + A A++ +NG
Sbjct: 213 VRNFDVEFSEKDLHVLFEEYGTIRSCRVMTDANGNSRGFGFVSFENADQANAALREMNGR 272
Query: 180 LINDKQVYVGLFVRRQER 197
++N K + V + RR +R
Sbjct: 273 MLNGKPLIVNIAQRRDQR 290
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 528 VSGMPATPVETPRPVP--VPISTLTSA-LASASPDDRTRMLGEQLYPLVENIEPVHASKV 584
VS P TP +P P P+ ++S L++ + +++ LG++LY V I P +A K+
Sbjct: 383 VSAAPRTPQASPSTAPDTPPLPPISSEDLSNMTLEEQRAALGDRLYIKVYEIAPDYAPKI 442
Query: 585 TGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARS 624
TGM LEMD + L+ + + L+ KV EA+ VL+ A+ S
Sbjct: 443 TGMFLEMDMKDAFVLLSNQKLLEDKVTEALCVLKVHASSS 482
>gi|294939182|ref|XP_002782349.1| RNA-binding motif, single-stranded-interacting protein, putative
[Perkinsus marinus ATCC 50983]
gi|239893941|gb|EER14144.1| RNA-binding motif, single-stranded-interacting protein, putative
[Perkinsus marinus ATCC 50983]
Length = 266
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/208 (53%), Positives = 155/208 (74%), Gaps = 3/208 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLY GDL +VNE+ LY++F+ + V S+RVCRD R SLGYAY+N+ N DA A +
Sbjct: 49 SLYAGDLAPDVNEAVLYEVFNGIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERALDT 108
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LN+ PING+P R+M+SHRDP++R+SG GNV++KNLD +IDNKAL DTF+ FG +LSCKVA
Sbjct: 109 LNYSPINGRPCRLMWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFGNILSCKVA 168
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK-FT 207
+ +G+S+G+GFV FE++E+A+ AI LNGM I +K VYV F + +R+ SPK FT
Sbjct: 169 LTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVAQFKKTADRSDG--SPKNFT 226
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITS 235
NVY+ ++ + T+E +++ FG FG ITS
Sbjct: 227 NVYIKHIPPSWTEEKIREEFGAFGEITS 254
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 113/225 (50%), Gaps = 18/225 (8%)
Query: 115 YGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAI 173
+ +++ +L ++ L + F G V S +V DS +S GY ++ F N A+ A+
Sbjct: 47 FASLYAGDLAPDVNEAVLYEVFNGIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERAL 106
Query: 174 KMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTI 233
LN IN + + ++ R +++ + NVYV NL + ++ L F FG I
Sbjct: 107 DTLNYSPINGRPCRL-MWSHRDPALRRSGA---GNVYVKNLDRNIDNKALYDTFSLFGNI 162
Query: 234 TSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLR 293
S V DGKSR FGFV+F+S ++A AA+ KLNG +K YV + +K A+R
Sbjct: 163 LSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVAQFKKTADRSDGSP 222
Query: 294 AKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITS 338
F N+Y+K++ S +EK++E F FG ITS
Sbjct: 223 KNF-------------TNVYIKHIPPSWTEEKIREEFGAFGEITS 254
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 99/201 (49%), Gaps = 21/201 (10%)
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAA 263
+F ++Y +LA V + L ++F G + S V +DS KS + ++NF + A A
Sbjct: 46 QFASLYAGDLAPDVNEAVLYEVFNGIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERA 105
Query: 264 VEKLNGTTNNDKVWYVGRAQK--RAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
++ LN + N GR + + R+ LR + N+Y+KNLD +I
Sbjct: 106 LDTLNYSPIN------GRPCRLMWSHRDPALR------------RSGAGNVYVKNLDRNI 147
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+++ L + FS FG I SCKV + G S+G GF F E A A+ ++NG IG K +Y
Sbjct: 148 DNKALYDTFSLFGNILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVY 207
Query: 382 VAVAQRKEERKARLQAQFAQI 402
VA ++ +R F +
Sbjct: 208 VAQFKKTADRSDGSPKNFTNV 228
>gi|440913528|gb|ELR62976.1| Polyadenylate-binding protein 4, partial [Bos grunniens mutus]
Length = 196
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/195 (60%), Positives = 142/195 (72%), Gaps = 3/195 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P DA A +
Sbjct: 3 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SID+KAL DTF+AFG +LSCKV
Sbjct: 63 MNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDNSIDDKALYDTFSAFGNILSCKVV 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D NG SKGY FV FE +EAA AI+ +NGML+ND++V+VG F R+ER + + +F
Sbjct: 123 CDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEF 181
Query: 207 TNVYVNNLAETVTDE 221
TNVY+ N E V DE
Sbjct: 182 TNVYIKNFGEEVDDE 196
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 16/210 (7%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIK 174
++++ +L + + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 2 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 61
Query: 175 MLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTIT 234
+N +I K + + R + V NV++ NL ++ D+ L F FG I
Sbjct: 62 TMNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDNSIDDKALYDTFSAFGNIL 117
Query: 235 SAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRA 294
S V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR + R EREA+L A
Sbjct: 118 SCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGA 176
Query: 295 KFEQERISRYEKLKGANLYLKNLDDSINDE 324
K ++ N+Y+KN + ++DE
Sbjct: 177 KAKE----------FTNVYIKNFGEEVDDE 196
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 26/196 (13%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G + S V +D +S + +VNFQ P A A++
Sbjct: 3 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 62
Query: 267 LNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
+N K +W ++R+ LR K N+++KNLD+SI+
Sbjct: 63 MNFDVIKGKPIRIMW--------SQRDPSLR------------KSGVGNVFIKNLDNSID 102
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
D+ L + FS FG I SCKV+ D++G SKG F F E A +A+ +MNG ++ + ++V
Sbjct: 103 DKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV 161
Query: 383 AVAQRKEERKARLQAQ 398
+ ++ER+A L A+
Sbjct: 162 GRFKSRKEREAELGAK 177
>gi|273068254|gb|ACZ97550.1| apoptosis-promoting RNA-binding protein [Ornithodoros moubata]
Length = 204
Score = 240 bits (612), Expect = 2e-60, Method: Composition-based stats.
Identities = 119/204 (58%), Positives = 149/204 (73%), Gaps = 2/204 (0%)
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF PI KPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKA+ DTF+AFG +LS
Sbjct: 1 ALDTMNFDPIKNKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGNILS 60
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNV 202
C+VA D SKGYGFV FE EEAA NAI +NGML+N K+V+VG F+ R+ER + +
Sbjct: 61 CRVATDEEANSKGYGFVHFETEEAANNAISKVNGMLLNGKKVFVGRFIPRKERERLLGDK 120
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+ +FTNVY+ N + + DE L IF +G +TSA VM D +GK+R FGFV+F+ P+ A
Sbjct: 121 ARRFTNVYIKNFGDELDDEKLVVIFDKYGKVTSAKVMVDENGKNRGFGFVSFEDPECAEK 180
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRA 286
AVE+LNG K YVGRAQK+A
Sbjct: 181 AVEELNGKDVGGKPLYVGRAQKKA 204
Score = 137 bits (344), Expect = 2e-29, Method: Composition-based stats.
Identities = 72/181 (39%), Positives = 112/181 (61%), Gaps = 10/181 (5%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NV++ NL +++ ++ + F FG I S V D + S+ +GFV+F++ +AA A+ K+
Sbjct: 33 NVFIKNLDKSIDNKAMYDTFSAFGNILSCRVATDEEANSKGYGFVHFETEEAANNAISKV 92
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG N K +VGR R ERE + ++ R+ N+Y+KN D ++DEKL
Sbjct: 93 NGMLLNGKKVFVGRFIPRKERE-----RLLGDKARRF-----TNVYIKNFGDELDDEKLV 142
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
+F ++G +TS KVMVD++G ++G GF +F PE A +A+ E+NGK +G KPLYV AQ+
Sbjct: 143 VIFDKYGKVTSAKVMVDENGKNRGFGFVSFEDPECAEKAVEELNGKDVGGKPLYVGRAQK 202
Query: 388 K 388
K
Sbjct: 203 K 203
Score = 108 bits (271), Expect = 8e-21, Method: Composition-based stats.
Identities = 64/182 (35%), Positives = 104/182 (57%), Gaps = 12/182 (6%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GNV ++ +L+++++ +YD FS ++S RV D+ S GY +V++ + A
Sbjct: 29 SGVGNV--FIKNLDKSIDNKAMYDTFSAFGNILSCRVATDEEANSK-GYGFVHFETEEAA 85
Query: 83 ANAKEALNFMPINGKPIRI-MYSHRDPSIRKSG-----YGNVFIKNLDTSIDNKALCDTF 136
NA +N M +NGK + + + R R G + NV+IKN +D++ L F
Sbjct: 86 NNAISKVNGMLLNGKKVFVGRFIPRKERERLLGDKARRFTNVYIKNFGDELDDEKLVVIF 145
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
+G V S KV +D NG+++G+GFV FE+ E A+ A++ LNG + K +YVG R Q+
Sbjct: 146 DKYGKVTSAKVMVDENGKNRGFGFVSFEDPECAEKAVEELNGKDVGGKPLYVG---RAQK 202
Query: 197 RA 198
+A
Sbjct: 203 KA 204
Score = 67.4 bits (163), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 53/86 (61%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNE 369
N+++KNLD SI+++ + + FS FG I SC+V D+ SKG GF F E A A+++
Sbjct: 32 GNVFIKNLDKSIDNKAMYDTFSAFGNILSCRVATDEEANSKGYGFVHFETEEAANNAISK 91
Query: 370 MNGKMIGRKPLYVAVAQRKEERKARL 395
+NG ++ K ++V ++ER+ L
Sbjct: 92 VNGMLLNGKKVFVGRFIPRKERERLL 117
>gi|392339709|ref|XP_003753884.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) binding protein,
cytoplasmic 1-like [Rattus norvegicus]
Length = 475
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 125/275 (45%), Positives = 170/275 (61%), Gaps = 32/275 (11%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V E+ LY++FS + ++S+RVCRD + R SLGYAY+N+ P DA A +
Sbjct: 12 SLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I G+PIRIM+SHRDP +R+SG GN+FIKNL+ SIDNKAL DTF+ FG++LS KV
Sbjct: 72 MNFEMIKGQPIRIMWSHRDPGLRRSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKVV 131
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
+ +G S+G+GFV FE EAAQ AI +NGML+ND++V R +
Sbjct: 132 YNEHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKV-------RSD------------ 171
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
Y +LA + F VM +S S+ FGFV F SP+ A AV ++N
Sbjct: 172 -YPWSLASLCPATLISSCFQ---------VMTESS-HSKGFGFVCFSSPEEATKAVTEMN 220
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR 303
G K YV AQ++ ER+A L ++ + R+SR
Sbjct: 221 GRIVGTKPLYVALAQRKEERKAILTNQY-RRRLSR 254
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 150/530 (28%), Positives = 242/530 (45%), Gaps = 107/530 (20%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L + F+ GT+LS +V D + +S GY ++ F+ A+ A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I + + + ++ R +++ N+++ NL ++ ++ L F FG+I S
Sbjct: 72 MNFEMIKGQPIRI-MWSHRDPGLRRS---GMGNIFIKNLENSIDNKALYDTFSTFGSILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ V+ + G SR FGFV+F++ +AA A+ +NG ND+ +R+
Sbjct: 128 SKVVYNEHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDR---------------KVRSD 171
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ S L A L I+SC ++ + SKG GF
Sbjct: 172 YPWSLAS----LCPATL-----------------------ISSCFQVMTESSHSKGFGFV 204
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMS----PL 411
FS PEEAT+A+ EMNG+++G KPLYVA+AQRKEERKA L Q+ + + +S P
Sbjct: 205 CFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYRRRLSRSVLSSFQQPT 264
Query: 412 ASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQ----AAGYGFQQQVFPGLRPGGPNYIMP 467
+ +P H Q +YY + M P A +G P P P
Sbjct: 265 SYLLPAVHQST----TQTMYYSSASIAPMQPDPRWTAQPHGPSSTCPPAASVVQPLSTAP 320
Query: 468 Y----------------HLQRQVHPG-QRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNA 510
+ H QR V+ G Q TG G+ QP + + ++
Sbjct: 321 HPCIHLSSASQASSQVPHTQRVVNIGTQTTGPGGEGSCIP-GQPLLAHRGSSAV----HS 375
Query: 511 RNGTDQSVVSMVP--VPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQ 568
+G +S V VP P VS + A P+ ++ +M+GE+
Sbjct: 376 AHGVQESTV-YVPGHQPLTVSMLDAAPLH----------------------EQKQMIGER 412
Query: 569 LYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
LY L+ + K+TGMLLEMD E+L L+ESPE+L K+ EA+AVL+
Sbjct: 413 LYSLIHDACAPLTGKITGMLLEMDNLELLLLLESPESLHAKIEEAVAVLK 462
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 26/175 (14%)
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-SDGKSRCFGFVNFQSPDAAAAAV 264
+++YV +L VT+ L ++F GTI S V +D + +S + ++NFQ P A A+
Sbjct: 10 LSSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 265 EKLNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
+ +N + +W + R+ LR + N+++KNL++S
Sbjct: 70 DTMNFEMIKGQPIRIMW--------SHRDPGLR------------RSGMGNIFIKNLENS 109
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI 375
I+++ L + FS FG+I S KV+ ++HG S+G GF F E A +A+N MNG ++
Sbjct: 110 IDNKALYDTFSTFGSILSSKVVYNEHG-SRGFGFVHFETHEAAQKAINTMNGMLL 163
>gi|342183555|emb|CCC93035.1| poly(A)-binding protein 1 [Trypanosoma congolense IL3000]
Length = 557
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 159/434 (36%), Positives = 239/434 (55%), Gaps = 26/434 (5%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
S++VG L+ N+NE +LYD F +V V SVRVC D + SLGY YVN+ NP DA A +
Sbjct: 10 SIWVGGLDPNLNEQKLYDHFVRVGPVASVRVCVDTVTQKSLGYGYVNFQNPADAEKALDQ 69
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+ + K IRI RDPS R+SG N+ +K L +++D AL + F+ FG + + +A
Sbjct: 70 AG-VKLGTKHIRIAKIQRDPSKRRSGVTNIVVKKLPSTVDTYALKEMFSKFGRLTAIGLA 128
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
D G+S+GY + +E EE+A A++ LNG+ I+D + V R Q ++ ++TN
Sbjct: 129 TDEKGESRGYARISYEKEESAVEAVRELNGVSIDDCSITVE---RYQPHHREEQLKQYTN 185
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
+YV NL +V DE LK++F FG +TSA V + S F +V + + +AAA AVE+L+
Sbjct: 186 LYVKNLDPSVDDEKLKEVFAKFGEVTSAKVRDLGNNSSVGFAYVAYATHEAAAKAVEELD 245
Query: 269 GTTNN-DKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
++ K + RE R + R + + K NLY+KN DD++ EKLK
Sbjct: 246 EKSSTLAKEGMKLSVCRFRSREERQRERERVRRERQQQHGKYPNLYVKNFDDTVTSEKLK 305
Query: 328 ELFSEFGTITSCKVMVDQHG-FSKGSGFAAFSMPEEATRALNEMNGKM-IGRKPLYVAVA 385
ELF FG S VM+D+ S+ GF +F A++A+ E++G +G +PL+V A
Sbjct: 306 ELFERFGETVSVSVMMDKATQVSRCFGFVSFKEQSAASQAIQELHGSTALGPRPLFVTYA 365
Query: 386 QRKEERKARLQA---QFAQIRAPGGMSPLASGIPGYHHGAPRLG---PQQLYYGQGTPGL 439
RK+ R+ L+ + ++R P M L SG+ AP+LG P ++ G P +
Sbjct: 366 LRKDARRQTLEDIRNKQPRMRQP-PMGGLMSGM-----MAPQLGFMNPPTMF--NGLPFM 417
Query: 440 MP-----PQAAGYG 448
P P A G G
Sbjct: 418 NPRMPMMPSAMGMG 431
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 49/69 (71%)
Query: 549 LTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
L++ LAS P+ + +LGE+LY + P A+KVTGMLLEMD +E+L+L++SP L T
Sbjct: 483 LSTMLASLPPEQQKNVLGERLYNYIVRNNPSVAAKVTGMLLEMDNSEILNLLDSPSMLDT 542
Query: 609 KVAEAMAVL 617
KV EA+ VL
Sbjct: 543 KVQEALDVL 551
>gi|444720785|gb|ELW61557.1| Polyadenylate-binding protein 1 [Tupaia chinensis]
Length = 232
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/225 (51%), Positives = 150/225 (66%), Gaps = 3/225 (1%)
Query: 68 SLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSI 127
SLGY YV++ P D A + +NF I GKP+RIM+S DPS+ KS N+FIKNL SI
Sbjct: 6 SLGYTYVDFQKPTDMERALDTMNFDVIKGKPVRIMWSQHDPSLHKSEVSNIFIKNLGKSI 65
Query: 128 DNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVY 187
DNKAL DTF AFG +LSCKV D NG SKGYGFV FE +EA + AI+ ++GML+ND +V+
Sbjct: 66 DNKALYDTFPAFGNILSCKVVCDENG-SKGYGFVHFETQEAVERAIEKMSGMLLNDFKVF 124
Query: 188 VGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK 245
VG F R+ER + + +FTNVY+ N E + DE LK +FG FG VM D GK
Sbjct: 125 VGQFKSRKEREAELGARAKEFTNVYIKNFGEDMDDEHLKDLFGKFGPALRVKVMTDESGK 184
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREA 290
S+ FGFV+F+ + A AV ++NG N K Y+GRAQK+ E++
Sbjct: 185 SKGFGFVSFERHEDAQKAVNEMNGKELNGKQIYIGRAQKKVEQQT 229
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 135/240 (56%), Gaps = 15/240 (6%)
Query: 154 QSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNN 213
S GY +V F+ + A+ +N +I K V + + VS N+++ N
Sbjct: 5 HSLGYTYVDFQKPTDMERALDTMNFDVIKGKPVRIMWSQHDPSLHKSEVS----NIFIKN 60
Query: 214 LAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNN 273
L +++ ++ L F FG I S V+ D +G S+ +GFV+F++ +A A+EK++G N
Sbjct: 61 LGKSIDNKALYDTFPAFGNILSCKVVCDENG-SKGYGFVHFETQEAVERAIEKMSGMLLN 119
Query: 274 DKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEF 333
D +VG+ + R EREA+L A+ ++ N+Y+KN + ++DE LK+LF +F
Sbjct: 120 DFKVFVGQFKSRKEREAELGARAKE----------FTNVYIKNFGEDMDDEHLKDLFGKF 169
Query: 334 GTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
G KVM D+ G SKG GF +F E+A +A+NEMNGK + K +Y+ AQ+K E++
Sbjct: 170 GPALRVKVMTDESGKSKGFGFVSFERHEDAQKAVNEMNGKELNGKQIYIGRAQKKVEQQT 229
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNE 369
+N+++KNL SI+++ L + F FG I SCKV+ D++G SKG GF F E RA+ +
Sbjct: 54 SNIFIKNLGKSIDNKALYDTFPAFGNILSCKVVCDENG-SKGYGFVHFETQEAVERAIEK 112
Query: 370 MNGKMIGRKPLYVAVAQRKEERKARLQAQ 398
M+G ++ ++V + ++ER+A L A+
Sbjct: 113 MSGMLLNDFKVFVGQFKSRKEREAELGAR 141
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
++Y+ + +++++ L DLF + + V+V D+S +S G+ +V++ +DA A
Sbjct: 147 NVYIKNFGEDMDDEHLKDLFGKFGPALRVKVMTDESGKSK-GFGFVSFERHEDAQKAVNE 205
Query: 89 LNFMPINGKPIRI 101
+N +NGK I I
Sbjct: 206 MNGKELNGKQIYI 218
>gi|384495100|gb|EIE85591.1| hypothetical protein RO3G_10301 [Rhizopus delemar RA 99-880]
Length = 359
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 141/367 (38%), Positives = 203/367 (55%), Gaps = 58/367 (15%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVG+L +++E+ L + F V SV+VCRD SLGYA++N+ PQD + A E
Sbjct: 40 SLYVGELAPHIDEAMLKEHFGNVK---SVQVCRDSVTNQSLGYAHINFYTPQDCSAAFEN 96
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LN I+G R+M S R+ + R SG GN+ +KNL ++DNK+L DTF+ +G V+SC+V
Sbjct: 97 LNHSKIDGTTYRLMISERETTKRVSGAGNIILKNLHPNVDNKSLYDTFSRWGNVISCRVF 156
Query: 149 IDSNGQS-KGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA-------QQ 200
G S KGYGFV ++ AA+ AI +NG ++ K+V+ V + E+ QQ
Sbjct: 157 NKLTGGSVKGYGFVNYDTYAAAERAISFVNGKMLFGKEVHASHQVLKNEKESLLSHNDQQ 216
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +FTNVYV NL+ VT++DL ++F G ++S +V +D K + FGFVNF+ P+ A
Sbjct: 217 HC--RFTNVYVKNLSSDVTEDDLGELFSTIGPVSSVLVQRDDQHKPKGFGFVNFELPEDA 274
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
AV +L +DK ++ +
Sbjct: 275 ERAVNEL-----HDKDFFA---------------------------------------ED 290
Query: 321 INDEKLKELFSEFGTITSCKVMVDQH-GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
+ DE L F +GTITS K+M D+ G KG GF FS +EA RA+ EMNG+ I KP
Sbjct: 291 VTDEILINNFLPYGTITSAKIMKDESTGAPKGFGFVCFSSSDEANRAVAEMNGRFISSKP 350
Query: 380 LYVAVAQ 386
+YVA+AQ
Sbjct: 351 IYVALAQ 357
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 126/283 (44%), Gaps = 48/283 (16%)
Query: 13 VTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYA 72
++ T SG GN+ L +L NV+ LYD FS+ V+S RV + S GY
Sbjct: 111 ISERETTKRVSGAGNIIL--KNLHPNVDNKSLYDTFSRWGNVISCRVFNKLTGGSVKGYG 168
Query: 73 YVNYSNPQDAANAKEALNFMPINGKPIRI-----------MYSHRDPSIRKSGYGNVFIK 121
+VNY A A +N + GK + + SH D + + NV++K
Sbjct: 169 FVNYDTYAAAERAISFVNGKMLFGKEVHASHQVLKNEKESLLSHNDQ--QHCRFTNVYVK 226
Query: 122 NLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLI 181
NL + + L + F+ G V S V D + KG+GFV FE E A+ A+ L
Sbjct: 227 NLSSDVTEDDLGELFSTIGPVSSVLVQRDDQHKPKGFGFVNFELPEDAERAVNEL----- 281
Query: 182 NDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD 241
+DK + AE VTDE L F +GTITSA +MKD
Sbjct: 282 HDKDFF---------------------------AEDVTDEILINNFLPYGTITSAKIMKD 314
Query: 242 -SDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQ 283
S G + FGFV F S D A AV ++NG + K YV AQ
Sbjct: 315 ESTGAPKGFGFVCFSSSDEANRAVAEMNGRFISSKPIYVALAQ 357
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 23/192 (11%)
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVE 265
T++YV LA + + LK+ HFG + S V +DS +S + +NF +P +AA E
Sbjct: 39 TSLYVGELAPHIDEAMLKE---HFGNVKSVQVCRDSVTNQSLGYAHINFYTPQDCSAAFE 95
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGA-NLYLKNLDDSINDE 324
LN + + + + +ERE R + GA N+ LKNL +++++
Sbjct: 96 NLNHSKIDGTTYRL----MISERETTKR-------------VSGAGNIILKNLHPNVDNK 138
Query: 325 KLKELFSEFGTITSCKVMVDQHGFS-KGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVA 383
L + FS +G + SC+V G S KG GF + A RA++ +NGKM+ K ++ +
Sbjct: 139 SLYDTFSRWGNVISCRVFNKLTGGSVKGYGFVNYDTYAAAERAISFVNGKMLFGKEVHAS 198
Query: 384 VAQRKEERKARL 395
K E+++ L
Sbjct: 199 HQVLKNEKESLL 210
>gi|295414050|gb|ADG08184.1| cytoplasmic poly(A) binding protein, partial [Schmidtea
mediterranea]
Length = 491
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 179/472 (37%), Positives = 237/472 (50%), Gaps = 94/472 (19%)
Query: 223 LKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRA 282
L+++F FG ITSA VM D +GKS+ FGFV F+ + A +AV+ LNG D+ YVGRA
Sbjct: 10 LREMFLEFGEITSAKVMIDENGKSKGFGFVCFKDSETAESAVKALNGKMFKDRQLYVGRA 69
Query: 283 QKRAEREADLRAKFEQERISRYEK-LKGANLYLKNLDDSINDEKLKELFSEFGTITSCKV 341
QK+ ER +LR+ FE++R R + +G NLY+KNLDDSI+D +LK+ F FG ITS KV
Sbjct: 70 QKKNERLDELRSHFEKQRAERSSRYTQGVNLYVKNLDDSIDDTRLKQEFVVFGNITSAKV 129
Query: 342 MVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ 401
M D + SKG GF FS PEEAT+A+ EMNGK+ G KPLYVA+AQRKE+RKA L +Q+ Q
Sbjct: 130 MTDSNNRSKGFGFVCFSNPEEATKAVTEMNGKICGSKPLYVALAQRKEDRKAHLASQYMQ 189
Query: 402 IRAPG--------GMSPLASGIPGYHHGAPRLGPQQLYYGQGTP-------GLMPPQAAG 446
P ++ L SG P G P + P TP MPPQ
Sbjct: 190 RVNPHRNNYPNQVSVNTLISGGP---PGGPSILPYAFAPNASTPRVYTQSAAFMPPQNRW 246
Query: 447 YGFQQQVFPGLRPGGPNYIMPYHLQ------RQV---HPGQRTG--VRRSGNTHQMQQPQ 495
N + P LQ RQ+ H G G V NT MQ Q
Sbjct: 247 S---------------NRMHPSQLQFNGGNMRQLANAHFGNMEGSSVPIQNNTMGMQANQ 291
Query: 496 F-----------MRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSG--MP----ATPVET 538
M ++N + + NG +V S ++G MP A+ +
Sbjct: 292 IRQVSMIPNQRPMLSNNANVSASNVMMNGVANTVKSAPQNSRPITGVQMPITSQASNISQ 351
Query: 539 PRP-------------------VPVPISTLTSALASASPDDRTRM------LGEQLYPLV 573
RP V PI+ ++ L S + + T + EQ L
Sbjct: 352 QRPPNQPTRQITGQSVISGNQNVNRPINNGSNQLVSGNLEPLTISTLASAPIAEQKQMLG 411
Query: 574 ENIEP-VH------ASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
E + P VH A K+TGMLLE+D TE+LH++ES ++L TK+ EAM VLQ
Sbjct: 412 ERLYPLVHRMYPELAGKITGMLLEIDNTELLHMLESEDSLTTKIEEAMNVLQ 463
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 110/180 (61%), Gaps = 13/180 (7%)
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L + F FG + S KV ID NG+SKG+GFV F++ E A++A+K LNG + D+Q+YVG
Sbjct: 10 LREMFLEFGEITSAKVMIDENGKSKGFGFVCFKDSETAESAVKALNGKMFKDRQLYVGRA 69
Query: 192 VRRQERAQQ----------NVSPKFT---NVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
++ ER + S ++T N+YV NL +++ D LK+ F FG ITSA V
Sbjct: 70 QKKNERLDELRSHFEKQRAERSSRYTQGVNLYVKNLDDSIDDTRLKQEFVVFGNITSAKV 129
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
M DS+ +S+ FGFV F +P+ A AV ++NG K YV AQ++ +R+A L +++ Q
Sbjct: 130 MTDSNNRSKGFGFVCFSNPEEATKAVTEMNGKICGSKPLYVALAQRKEDRKAHLASQYMQ 189
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 92/172 (53%), Gaps = 18/172 (10%)
Query: 43 QLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRI- 101
+L ++F + ++ S +V D++ +S G+ +V + + + A +A +ALN + + +
Sbjct: 9 KLREMFLEFGEITSAKVMIDENGKSK-GFGFVCFKDSETAESAVKALNGKMFKDRQLYVG 67
Query: 102 -----------MYSH--RDPSIRKSGYG---NVFIKNLDTSIDNKALCDTFAAFGTVLSC 145
+ SH + + R S Y N+++KNLD SID+ L F FG + S
Sbjct: 68 RAQKKNERLDELRSHFEKQRAERSSRYTQGVNLYVKNLDDSIDDTRLKQEFVVFGNITSA 127
Query: 146 KVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
KV DSN +SKG+GFV F N E A A+ +NG + K +YV L R+++R
Sbjct: 128 KVMTDSNNRSKGFGFVCFSNPEEATKAVTEMNGKICGSKPLYVALAQRKEDR 179
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 52/80 (65%)
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
KL+E+F EFG ITS KVM+D++G SKG GF F E A A+ +NGKM + LYV
Sbjct: 9 KLREMFLEFGEITSAKVMIDENGKSKGFGFVCFKDSETAESAVKALNGKMFKDRQLYVGR 68
Query: 385 AQRKEERKARLQAQFAQIRA 404
AQ+K ER L++ F + RA
Sbjct: 69 AQKKNERLDELRSHFEKQRA 88
>gi|71659778|ref|XP_821609.1| poly(A)-binding protein [Trypanosoma cruzi strain CL Brener]
gi|459650|gb|AAC46487.1| poly(A) binding protein [Trypanosoma cruzi]
gi|515321|gb|AAC46489.1| poly(A) binding protein [Trypanosoma cruzi]
gi|2854066|gb|AAC02537.1| poly(A)-binding protein [Trypanosoma cruzi]
gi|2854068|gb|AAC02538.1| poly(A)-binding protein [Trypanosoma cruzi]
gi|70886993|gb|EAN99758.1| poly(A)-binding protein, putative [Trypanosoma cruzi]
gi|407408287|gb|EKF31789.1| poly(A)-binding protein, putative,polyadenylate-binding protein,
putative [Trypanosoma cruzi marinkellei]
gi|407847529|gb|EKG03215.1| poly(A)-binding protein, putative,polyadenylate-binding protein,
putative [Trypanosoma cruzi]
Length = 550
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 158/466 (33%), Positives = 238/466 (51%), Gaps = 68/466 (14%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
S++VG L+ N+NE +LYD F ++ V SVRVC D + SLGY YVN+ NP DA A +
Sbjct: 10 SIWVGGLDPNLNEQKLYDHFVRLGPVASVRVCVDSVTQKSLGYGYVNFQNPADAEKALDQ 69
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+ + K IRI RDPS R+SG N+ +K L S+D AL + F+ +G + + +A
Sbjct: 70 AG-VKLGSKHIRIAKIQRDPSKRRSGVTNIVVKKLPPSVDTYALKEMFSKYGRLTAIGLA 128
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
+ NG+S+GY + +E EE+A A++ +NGM+I+D + V R Q ++ +FTN
Sbjct: 129 TNENGESRGYARISYEKEESAIQAVQEVNGMVIDDCAITVE---RYQPHHREEQLKQFTN 185
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
+YV NL +V DE LK++F FG +TSA V ++ F +V + + +AAA AVE+L+
Sbjct: 186 LYVKNLDPSVNDEKLKEVFSAFGEVTSAKVRDLGANQTVGFAYVAYATHEAAAKAVEELD 245
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKL-------------------KG 309
E+E+ L + + + R+ K
Sbjct: 246 ------------------EKESPLAKEGMKLSVCRFRSRDERQRERERLRRERQQQHSKY 287
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHG-FSKGSGFAAFSMPEEATRALN 368
NLY+KN DD++ E+LKELF G S VM+D+ S+ GF +F A+RA+
Sbjct: 288 PNLYVKNFDDTVTSERLKELFERCGETVSVSVMMDRATRVSRCFGFVSFKEQSAASRAIQ 347
Query: 369 EMNGKM-IGRKPLYVAVAQRKEERKARLQ----AQFAQIRAPGGMSPLASGIP--GYHHG 421
E++G +G +PL+V A RK+ R+ L+ Q + P G P G+
Sbjct: 348 ELHGSTALGPRPLFVTYALRKDARRQTLEDMRNKQPRMRQPPMGSLMGGMMGPQLGF--- 404
Query: 422 APRLGPQQLYYGQGTPGLMP-----PQAAGYGFQQQVFPGLRPGGP 462
+GPQ ++ G P + P P G G Q LRP GP
Sbjct: 405 ---MGPQAMF--NGVPFVNPRMSMMPTPMGMGGQ------LRPMGP 439
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 25/124 (20%)
Query: 519 VSMVPVPFEVSG----MPATPVETPR---------------PVPVPIS------TLTSAL 553
+SM+P P + G M TP+ R P P P S L++ L
Sbjct: 421 MSMMPTPMGMGGQLRPMGPTPMNQVRARPMPQRPPMQPIMAPPPQPQSLASQGQNLSTVL 480
Query: 554 ASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEA 613
A+ +P+ + +LGE+LY + I P A+KVTGMLLEMD E+L+L+++P L KV EA
Sbjct: 481 ANLTPEQQKNVLGERLYNHIVAINPAAAAKVTGMLLEMDNGEILNLLDTPGLLDAKVQEA 540
Query: 614 MAVL 617
+ VL
Sbjct: 541 LEVL 544
>gi|198422109|ref|XP_002123332.1| PREDICTED: similar to poly A binding protein, cytoplasmic 1 b,
partial [Ciona intestinalis]
Length = 500
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 112/237 (47%), Positives = 164/237 (69%), Gaps = 11/237 (4%)
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTI 233
+NGML+NDK+V+VG F+ R ER ++ +FTNVY+ N + ++ L+ +F +G +
Sbjct: 1 VNGMLLNDKKVFVGKFLTRSERIKKMGERVRQFTNVYIKNFGDKYDEKTLQVMFEKYGVV 60
Query: 234 TSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNG-----TTNNDKVWYVGRAQKRAER 288
S VM+D DG SR FGFV + S + A AAVE +NG + + + YVGRAQK+ ER
Sbjct: 61 KSVAVMRDRDGNSRGFGFVAYDSHEEAQAAVEAMNGQEIEGASGSTDILYVGRAQKKQER 120
Query: 289 EADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGF 348
+ +LR ++EQ++ R ++ +G NLY+KNLDD++ D++L+E F+ +GTITS K+M D
Sbjct: 121 QQELRGQYEQQKQERIQRFQGVNLYVKNLDDNVTDDELREAFATYGTITSAKIMSDGECS 180
Query: 349 ----SKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ 401
S+G GF FS PEEAT+A+ EMNG+++G KPLYVA+AQR+E+RKA L AQ+ Q
Sbjct: 181 TGERSRGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRREDRKAHLTAQYMQ 237
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 128/241 (53%), Gaps = 27/241 (11%)
Query: 89 LNFMPINGKPIRI-MYSHRDPSIRKSG-----YGNVFIKNLDTSIDNKALCDTFAAFGTV 142
+N M +N K + + + R I+K G + NV+IKN D K L F +G V
Sbjct: 1 VNGMLLNDKKVFVGKFLTRSERIKKMGERVRQFTNVYIKNFGDKYDEKTLQVMFEKYGVV 60
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQ-----VYVGLFVRRQER 197
S V D +G S+G+GFV +++ E AQ A++ +NG I +YVG ++QER
Sbjct: 61 KSVAVMRDRDGNSRGFGFVAYDSHEEAQAAVEAMNGQEIEGASGSTDILYVGRAQKKQER 120
Query: 198 AQ----------QNVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG- 244
Q Q +F N+YV NL + VTD++L++ F +GTITSA +M D +
Sbjct: 121 QQELRGQYEQQKQERIQRFQGVNLYVKNLDDNVTDDELREAFATYGTITSAKIMSDGECS 180
Query: 245 ---KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERI 301
+SR FGFV F SP+ A AV ++NG K YV AQ+R +R+A L A++ Q
Sbjct: 181 TGERSRGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRREDRKAHLTAQYMQRMT 240
Query: 302 S 302
S
Sbjct: 241 S 241
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 26/195 (13%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + +E L +F + V SV V RD+ +S G+ +V Y + ++A A E
Sbjct: 34 TNVYIKNFGDKYDEKTLQVMFEKYGVVKSVAVMRDRDG-NSRGFGFVAYDSHEEAQAAVE 92
Query: 88 ALNFMPING--------------------KPIRIMYS-HRDPSIRKSGYGNVFIKNLDTS 126
A+N I G + +R Y + I++ N+++KNLD +
Sbjct: 93 AMNGQEIEGASGSTDILYVGRAQKKQERQQELRGQYEQQKQERIQRFQGVNLYVKNLDDN 152
Query: 127 IDNKALCDTFAAFGTVLSCKVAID---SNGQ-SKGYGFVQFENEEAAQNAIKMLNGMLIN 182
+ + L + FA +GT+ S K+ D S G+ S+G+GFV F + E A A+ +NG ++
Sbjct: 153 VTDDELREAFATYGTITSAKIMSDGECSTGERSRGFGFVCFSSPEEATKAVTEMNGRIVG 212
Query: 183 DKQVYVGLFVRRQER 197
K +YV L RR++R
Sbjct: 213 TKPLYVALAQRREDR 227
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRD---QSKRSSLGYAYVNYSNPQD 81
+ V+LYV +L+ NV + +L + F+ + S ++ D + S G+ +V +S+P++
Sbjct: 139 FQGVNLYVKNLDDNVTDDELREAFATYGTITSAKIMSDGECSTGERSRGFGFVCFSSPEE 198
Query: 82 AANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSI 127
A A +N + KP+ + + R RK+ +++ + +S+
Sbjct: 199 ATKAVTEMNGRIVGTKPLYVALAQRRED-RKAHLTAQYMQRMTSSM 243
>gi|71745456|ref|XP_827358.1| poly(A)-binding protein 1 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|4104919|gb|AAD13337.1| poly(A) binding protein I [Trypanosoma brucei]
gi|70831523|gb|EAN77028.1| poly(A)-binding protein 1 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|261331563|emb|CBH14557.1| PABP2 [Trypanosoma brucei gambiense DAL972]
Length = 555
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 139/381 (36%), Positives = 217/381 (56%), Gaps = 27/381 (7%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
S++VG L+ N+NE +LYD F +V V SVRVC D + SLGY YVN+ NP DA A +
Sbjct: 10 SIWVGGLDPNLNEQKLYDHFVRVGPVASVRVCVDSVTQKSLGYGYVNFQNPADAEKALDQ 69
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+ + K IRI RDPS R+SG N+ +K L ++D AL + F+ +G + + +A
Sbjct: 70 AG-VKLGTKHIRIAKIQRDPSKRRSGVTNIIVKKLPPTVDTYALKEMFSKYGRLTAIGLA 128
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
D G+S+GY + +E EE+A +A++ LNG+ I+D + V R Q ++ ++TN
Sbjct: 129 TDEKGESRGYARISYEKEESAVDAVRELNGVSIDDCAITVE---RYQPHHREEQLKQYTN 185
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
+YV NL +V DE LK++F FG +TSA V + + FG+V + + +AAA AVE+L
Sbjct: 186 LYVKNLDPSVDDEKLKEVFSPFGEVTSAKVRDLAGRPTVGFGYVAYATHEAAAKAVEEL- 244
Query: 269 GTTNNDKVWYVGRAQKR-----------AEREADLRAKFEQERISRYEKLKGANLYLKNL 317
+DK + + + +RE + + Q++ S+Y NLY+KN
Sbjct: 245 ----DDKESPLAKEGMKLSVCRFRSREERKRERERLRRERQQQHSKY-----PNLYVKNF 295
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEEATRALNEMNGKM-I 375
DD++ E+LK LF FG S VM+D+ S+ GF +F A +A+ E++G +
Sbjct: 296 DDTVTSERLKALFDPFGETVSVSVMMDKATKVSRCFGFVSFKEQSSAAQAIQELHGSTAL 355
Query: 376 GRKPLYVAVAQRKEERKARLQ 396
G +PL+V+ A RK+ R+ L+
Sbjct: 356 GPRPLFVSYALRKDARRQTLE 376
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 537 ETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEV 596
+ P+P L++ LAS +PD + +LGE+LY + P A+KVTGMLLEMD +E+
Sbjct: 469 QIPQPPVAQGQNLSTVLASMTPDQQKNVLGERLYNYIVRNNPSFAAKVTGMLLEMDNSEI 528
Query: 597 LHLIESPEALKTKVAEAMAVL 617
L+L+++ L TKV EA+ VL
Sbjct: 529 LNLLDNHSLLDTKVQEALDVL 549
>gi|6137350|pdb|1CVJ|A Chain A, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137351|pdb|1CVJ|B Chain B, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137352|pdb|1CVJ|C Chain C, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137353|pdb|1CVJ|D Chain D, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137354|pdb|1CVJ|E Chain E, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137355|pdb|1CVJ|F Chain F, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137356|pdb|1CVJ|G Chain G, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137357|pdb|1CVJ|H Chain H, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
Length = 190
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 131/173 (75%), Gaps = 1/173 (0%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKER 179
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 103/196 (52%), Gaps = 26/196 (13%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G I S V +D +S + +VNFQ P A A++
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 267 LNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
+N K +W ++R+ LR K N+++KNLD SI+
Sbjct: 72 MNFDVIKGKPVRIMW--------SQRDPSLR------------KSGVGNIFIKNLDKSID 111
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
++ L + FS FG I SCKV+ D++G SKG GF F E A RA+ +MNG ++ + ++V
Sbjct: 112 NKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV 170
Query: 383 AVAQRKEERKARLQAQ 398
+ ++ER+A L A+
Sbjct: 171 GRFKSRKEREAELGAR 186
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 102/190 (53%), Gaps = 6/190 (3%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 286 AEREADLRAK 295
EREA+L A+
Sbjct: 177 KEREAELGAR 186
>gi|115520925|gb|ABJ08845.1| putative polyadenylate-binding protein 1 [Squalus acanthias]
Length = 212
Score = 227 bits (579), Expect = 1e-56, Method: Composition-based stats.
Identities = 113/212 (53%), Positives = 148/212 (69%), Gaps = 3/212 (1%)
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
+ +N I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LSCK
Sbjct: 2 DTMNSDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCK 61
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSP 204
V D NG SKGYGFV FE EAA+ AI+ +NGML+ND++V+VG F R+ER + +
Sbjct: 62 VVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAK 120
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
+FTNVY+ N E + DE LK+IF FG S VM D G+S+ FGFV+F+ + A AV
Sbjct: 121 EFTNVYIKNFGEDMDDERLKEIFNKFGAFLSVKVMTDDSGRSKGFGFVSFEKHEDAQKAV 180
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKF 296
+++NG N + YVG + ER+ +L+ KF
Sbjct: 181 DEMNGKEINGRQVYVGPCPXKVERQTELKRKF 212
Score = 145 bits (366), Expect = 7e-32, Method: Composition-based stats.
Identities = 77/192 (40%), Positives = 120/192 (62%), Gaps = 11/192 (5%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
N+++ NL +++ ++ L F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+
Sbjct: 32 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKM 90
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG ND+ +VGR + R EREA+L AK ++ N+Y+KN + ++DE+LK
Sbjct: 91 NGMLLNDRKVFVGRFKSRKEREAELGAKAKE----------FTNVYIKNFGEDMDDERLK 140
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
E+F++FG S KVM D G SKG GF +F E+A +A++EMNGK I + +YV
Sbjct: 141 EIFNKFGAFLSVKVMTDDSGRSKGFGFVSFEKHEDAQKAVDEMNGKEINGRQVYVGPCPX 200
Query: 388 KEERKARLQAQF 399
K ER+ L+ +F
Sbjct: 201 KVERQTELKRKF 212
Score = 43.5 bits (101), Expect = 0.37, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
++Y+ + +++++ +L ++F++ +SV+V D S RS G+ +V++ +DA A +
Sbjct: 124 NVYIKNFGEDMDDERLKEIFNKFGAFLSVKVMTDDSGRSK-GFGFVSFEKHEDAQKAVDE 182
Query: 89 LNFMPINGKPIRI 101
+N ING+ + +
Sbjct: 183 MNGKEINGRQVYV 195
>gi|400260922|pdb|4F02|A Chain A, Crystal Structure Of The Pabp-Binding Site Of Eif4g In
Complex With Rrm1-2 Of Pabp And Poly(A)
gi|400260925|pdb|4F02|D Chain D, Crystal Structure Of The Pabp-Binding Site Of Eif4g In
Complex With Rrm1-2 Of Pabp And Poly(A)
Length = 213
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/176 (60%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 13 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 72
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 73 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 132
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 133 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 187
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 103/196 (52%), Gaps = 26/196 (13%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G I S V +D +S + +VNFQ P A A++
Sbjct: 17 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 76
Query: 267 LNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
+N K +W ++R+ LR K N+++KNLD SI+
Sbjct: 77 MNFDVIKGKPVRIMW--------SQRDPSLR------------KSGVGNIFIKNLDKSID 116
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
++ L + FS FG I SCKV+ D++G SKG GF F E A RA+ +MNG ++ + ++V
Sbjct: 117 NKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV 175
Query: 383 AVAQRKEERKARLQAQ 398
+ ++ER+A L A+
Sbjct: 176 GRFKSRKEREAELGAR 191
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 102/190 (53%), Gaps = 6/190 (3%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 7 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 66
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 67 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 122
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+ +VGR + R
Sbjct: 123 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 181
Query: 286 AEREADLRAK 295
EREA+L A+
Sbjct: 182 KEREAELGAR 191
>gi|340056333|emb|CCC50664.1| poly(A)-binding protein [Trypanosoma vivax Y486]
Length = 548
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/374 (37%), Positives = 213/374 (56%), Gaps = 13/374 (3%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
S++VG L+ N+NE +LYD F +V V SVRVC D + SLGY YVN+ NP DA A +
Sbjct: 10 SIWVGGLDPNLNEQKLYDHFVRVGPVASVRVCVDTVTQKSLGYGYVNFQNPADAEKALDQ 69
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+ + K IRI RDPS R+SG N+ +K L ++D AL + F+ +G + + +A
Sbjct: 70 AG-VKLGSKHIRIARIQRDPSKRRSGVTNIVVKKLPPTVDTYALKEMFSKYGRLTAIGLA 128
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTN 208
+ G+S+GY + +E EE+A A++ +NGM I+D + V R Q ++ +TN
Sbjct: 129 TNEKGESRGYARISYEKEESAIEAVQGVNGMTIDDCPITVE---RYQPHHREEQLKLYTN 185
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK-SRCFGFVNFQSPDAAAAAVEKL 267
+YV NL +V DE LK++F +G +TSA V +D GK S F +V + + +AA AVE+L
Sbjct: 186 LYVKNLDPSVGDEKLKEVFSAYGEVTSAKV-RDLGGKMSVGFAYVAYATHEAAVKAVEEL 244
Query: 268 NGTTN---NDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
+ N + + + E R + +ER Y K NLY+KN DD++ E
Sbjct: 245 DDKENPLAKEGMKLSVCRFRSREERQRERERLRRERQQLYSKY--PNLYVKNFDDTVTSE 302
Query: 325 KLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEEATRALNEMNGKM-IGRKPLYV 382
+LKELF FG S VMVD+ S+ GF +F A+RA+ E++G +G +PL+V
Sbjct: 303 RLKELFERFGETVSVSVMVDKATKVSRCFGFVSFKEQNSASRAIQELHGSTALGPRPLFV 362
Query: 383 AVAQRKEERKARLQ 396
A RK+ R+ L+
Sbjct: 363 TYALRKDARRQTLE 376
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 51/69 (73%)
Query: 549 LTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
L++ LA+ +P+ + +LGE+LY + + P A+KVTGMLLEMD +E+L+L+++P L T
Sbjct: 474 LSTMLANLTPEQQKNVLGERLYNHIVRVNPSVAAKVTGMLLEMDNSEILNLLDTPGLLDT 533
Query: 609 KVAEAMAVL 617
KV EA+ VL
Sbjct: 534 KVQEALEVL 542
>gi|52221255|gb|AAU29548.1| poly(A)-binding protein [Crithidia fasciculata]
Length = 564
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 142/403 (35%), Positives = 218/403 (54%), Gaps = 27/403 (6%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
N S++VG L+ +NE +LYD F ++ V SVRVC D + + SLGY YVN+ +P DA A
Sbjct: 7 NPSIWVGGLDPELNEQKLYDYFVRIGPVASVRVCVDSATQKSLGYGYVNFQDPSDAEKAL 66
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
+ + + +RI RDPS R+SG N+ +K L S+D AL + F +G + +
Sbjct: 67 DQAG-AKLGTRFLRIAKIQRDPSKRRSGVNNILVKKLPKSVDTFALKEMFGKYGRLTAIG 125
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF 206
+A D G+S+GY + FE EE+A +A+K ++GM ++ + + V R Q + + + +F
Sbjct: 126 LACDERGESRGYARISFEREESAVDAVKEMDGMEMDGQAIVVE---RYQAQHRDEMLKQF 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRC-FGFVNFQSPDAAAAAVE 265
TN+YV NL TVTD L+ F +G ++SA V D +S FG+V F+ + AA AVE
Sbjct: 183 TNLYVKNLEPTVTDSKLRAFFAKYGEVSSAKVRDLGDAQSEVGFGYVAFEKHEDAAKAVE 242
Query: 266 KLNGTTNNDKVWYVGRA------QKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDD 319
+LNG K + +A + RE R + Q R + K NLY+K DD
Sbjct: 243 ELNG-----KECEIAKAGAPLDVSRFRSREERQRDRERQRRERAQQHSKYPNLYVKGFDD 297
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQH-GFSKGSGFAAFSMPEEATRALNEMNGK-MIGR 377
++ E+L+ELF +G S VM D+ G S+ GF + A+ A+ ++NG +
Sbjct: 298 TVTSERLEELFQRYGETVSVTVMTDKDTGMSRCFGFVSMKDQGAASHAIQDLNGSTFLSP 357
Query: 378 KPLYVAVAQRKEERKARLQAQFAQIRAP---------GGMSPL 411
+PL+V A RK+ R+ L+ + Q R GGM P+
Sbjct: 358 RPLFVTYALRKDARRQNLEERSKQFRMRQNPMNGPNMGGMPPM 400
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 49/69 (71%)
Query: 549 LTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
L + LA+ +P+ + +LGE+LY + P A+K+TGMLLEMD +E+L++++SP L +
Sbjct: 490 LAAVLANLNPEQQKNVLGERLYSYIVRNHPSVAAKITGMLLEMDNSEILNMLDSPVVLDS 549
Query: 609 KVAEAMAVL 617
K+AEA VL
Sbjct: 550 KIAEAQDVL 558
>gi|1262583|dbj|BAA02244.1| polyadenylate binding protein II [Homo sapiens]
Length = 193
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 146/193 (75%), Gaps = 7/193 (3%)
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
FTNVY+ N E V DE LK++F FG S VM+D +GKS+ FGFV+++ + A AVE
Sbjct: 1 FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVE 60
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ---ERISRYEKLKGANLYLKNLDDSIN 322
++NG + K+ +VGRAQK+ ER+A+L+ KFEQ ERISRY+ G NLY+KNLDD+I+
Sbjct: 61 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYIKNLDDTID 117
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
DEKL++ FS FG+ITS KVM+ + G SKG GF FS PEEAT+A+ EMNG+++G KPLYV
Sbjct: 118 DEKLRKEFSPFGSITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYV 176
Query: 383 AVAQRKEERKARL 395
A+AQRKEERKA L
Sbjct: 177 ALAQRKEERKAHL 189
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 115/191 (60%), Gaps = 15/191 (7%)
Query: 115 YGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIK 174
+ NV+IKN +D+++L + F+ FG LS KV D NG+SKG+GFV +E E A A++
Sbjct: 1 FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVE 60
Query: 175 MLNGMLINDKQVYVGLFVRRQERAQQNVSPKF-------------TNVYVNNLAETVTDE 221
+NG I+ K ++VG ++ ER Q + KF N+Y+ NL +T+ DE
Sbjct: 61 EMNGKEISGKIIFVGRAQKKVER-QAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDE 119
Query: 222 DLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGR 281
L+K F FG+ITSA VM + DG+S+ FGFV F SP+ A AV ++NG K YV
Sbjct: 120 KLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVAL 178
Query: 282 AQKRAEREADL 292
AQ++ ER+A L
Sbjct: 179 AQRKEERKAHL 189
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 107/194 (55%), Gaps = 18/194 (9%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + + V++ L +LFSQ + +SV+V RD + +S G+ +V+Y +DA A E
Sbjct: 2 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSK-GFGFVSYEKHEDANKAVE 60
Query: 88 ALNFMPINGKPI----------------RIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
+N I+GK I R + I + N++IKNLD +ID++
Sbjct: 61 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 120
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L F+ FG++ S KV ++ +G+SKG+GFV F + E A A+ +NG ++ K +YV L
Sbjct: 121 LRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 179
Query: 192 VRRQERAQQNVSPK 205
R++ER +P+
Sbjct: 180 QRKEERKAHLTNPE 193
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 65/94 (69%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNE 369
N+Y+KN + ++DE LKELFS+FG S KVM D +G SKG GF ++ E+A +A+ E
Sbjct: 2 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 61
Query: 370 MNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
MNGK I K ++V AQ+K ER+A L+ +F Q++
Sbjct: 62 MNGKEISGKIIFVGRAQKKVERQAELKRKFEQLK 95
>gi|389595175|ref|XP_003722810.1| poly(A)-binding protein 2 [Leishmania major strain Friedlin]
gi|323364038|emb|CBZ13044.1| poly(A)-binding protein 2 [Leishmania major strain Friedlin]
Length = 594
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 214/386 (55%), Gaps = 18/386 (4%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
N S++VG L+ ++ E +LYD F ++ V SVRVC D + + SLGY YVN+ +P DA A
Sbjct: 7 NPSIWVGGLDPDLQEQKLYDYFVRIGPVTSVRVCVDSATQKSLGYGYVNFQDPADAEKAL 66
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
+ + + +RI RDPS R+SG N+ +K L S+D AL + F+ FG + +
Sbjct: 67 DQAG-SKLGSRYLRIAKIQRDPSKRRSGVNNILVKKLPKSVDTYALKEMFSKFGRLTAIG 125
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF 206
+A D G+S+GY + FE EE+A +A++ ++GM ++ + + V R Q + + + +F
Sbjct: 126 LACDEKGESRGYARISFEREESAVDAVREMDGMEMDGQAIVVE---RYQAQHRDELLKQF 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRC-FGFVNFQSPDAAAAAVE 265
TN+YV NL VTDE L+ F +G ++SA V +S G+V FQ + AA AVE
Sbjct: 183 TNLYVKNLDPAVTDEKLRAFFAKYGEVSSAKVRDLGAAQSEAGLGYVAFQKHENAARAVE 242
Query: 266 KLNGTTNNDKVWYVGRA------QKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDD 319
+LNG K + +A + RE R + Q R + K NLY+K DD
Sbjct: 243 ELNG-----KECEIAKAGSPLDVSRFRSREERQRDRERQRRERAQQHSKYPNLYVKGFDD 297
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQH-GFSKGSGFAAFSMPEEATRALNEMNGK-MIGR 377
++ E+L+ELF +G S VM+D+ G S+ GF + A++A+ E+NG +
Sbjct: 298 TVTSERLEELFQRYGETVSVTVMMDKETGVSRCFGFVSMKDQNAASQAIQELNGSTFLSP 357
Query: 378 KPLYVAVAQRKEERKARLQAQFAQIR 403
+PL+V A RK+ R+ L+ + Q R
Sbjct: 358 RPLFVTYALRKDARRQNLEERSKQFR 383
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%)
Query: 549 LTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
L + LA+ +P+ + +LGE+LY + P A+K+TGMLLEMD E+L++++SP L +
Sbjct: 520 LAAVLANLNPEQQKNVLGERLYSYIVRSHPSVAAKITGMLLEMDNAEILNMLDSPTMLDS 579
Query: 609 KVAEAMAVL 617
K+AEA VL
Sbjct: 580 KIAEAQDVL 588
>gi|399950033|gb|AFP65689.1| polyadenylate-binding protein [Chroomonas mesostigmatica CCMP1168]
Length = 490
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 184/288 (63%), Gaps = 9/288 (3%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL V ES L +FS++ +V S+++CRD S S GY+YVN+ NP+DA A +
Sbjct: 35 CSLYVGDLSIYVEESSLMKIFSKIGKVHSIQICRDFSTGISRGYSYVNFLNPKDAQKAFK 94
Query: 88 ALNFMP---INGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
LN+ ++ KP+RIM+ +D S+R SG GN+FIKN+ DNK+L F+ FG +LS
Sbjct: 95 LLNYYTDETLHYKPLRIMWVQKDKSLRFSGTGNLFIKNIPRRYDNKSLSKLFSQFGKILS 154
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CK+A+D N +S GYGFV ++ E+ ++ AI+ +N I+ ++++VG F+ + +R +N S
Sbjct: 155 CKIALDENKRSMGYGFVHYKEEKDSKKAIEKMNNCFIDGEKIFVGPFISKVKRNNRNNSK 214
Query: 205 -KFTNVYVNN-LAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+FTNVY+ N L + + +K +F FG ITS + K ++ F FVNF++P+ A
Sbjct: 215 LRFTNVYIKNILFQNCNEIYIKDLFEIFGPITSIFIPKANEA-PLGFAFVNFENPEDAED 273
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISR---YEKL 307
A+ K+NG K YVG+A+ R ER+ L KF +++S+ Y+KL
Sbjct: 274 AIFKMNGKKIKGKTLYVGKAETRIERQRRLAKKFLDKKMSKVCFYKKL 321
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 144/287 (50%), Gaps = 21/287 (7%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKML 176
+++ +L ++ +L F+ G V S ++ D S G S+GY +V F N + AQ A K+L
Sbjct: 37 LYVGDLSIYVEESSLMKIFSKIGKVHSIQICRDFSTGISRGYSYVNFLNPKDAQKAFKLL 96
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFT---NVYVNNLAETVTDEDLKKIFGHFGTI 233
N ++ Y L R Q++ S +F+ N+++ N+ ++ L K+F FG I
Sbjct: 97 N-YYTDETLHYKPL---RIMWVQKDKSLRFSGTGNLFIKNIPRRYDNKSLSKLFSQFGKI 152
Query: 234 TSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLR 293
S + D + +S +GFV+++ + A+EK+N + + +VG + +R
Sbjct: 153 LSCKIALDENKRSMGYGFVHYKEEKDSKKAIEKMNNCFIDGEKIFVGPFISKVKRNNRNN 212
Query: 294 AKFEQERISRYEKLKGANLYLKN-LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGS 352
+K L+ N+Y+KN L + N+ +K+LF FG ITS + G
Sbjct: 213 SK-----------LRFTNVYIKNILFQNCNEIYIKDLFEIFGPITSIFIPKANEA-PLGF 260
Query: 353 GFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQF 399
F F PE+A A+ +MNGK I K LYV A+ + ER+ RL +F
Sbjct: 261 AFVNFENPEDAEDAIFKMNGKKIKGKTLYVGKAETRIERQRRLAKKF 307
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 15/194 (7%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN L++ ++ + + L LFSQ +++S ++ D++KR S+GY +V+Y +D+
Sbjct: 123 SGTGN--LFIKNIPRRYDNKSLSKLFSQFGKILSCKIALDENKR-SMGYGFVHYKEEKDS 179
Query: 83 ANAKEALNFMPINGKPI-------RIMYSHRDPSIRKSGYGNVFIKN-LDTSIDNKALCD 134
A E +N I+G+ I ++ ++R+ S K + NV+IKN L + + + D
Sbjct: 180 KKAIEKMNNCFIDGEKIFVGPFISKVKRNNRNNS--KLRFTNVYIKNILFQNCNEIYIKD 237
Query: 135 TFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRR 194
F FG + S + +N G+ FV FEN E A++AI +NG I K +YVG R
Sbjct: 238 LFEIFGPITSIFIP-KANEAPLGFAFVNFENPEDAEDAIFKMNGKKIKGKTLYVGKAETR 296
Query: 195 QERAQQNVSPKFTN 208
ER Q+ ++ KF +
Sbjct: 297 IER-QRRLAKKFLD 309
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 21/206 (10%)
Query: 191 FVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-SDGKSRCF 249
F++R+ + + S +YV +L+ V + L KIF G + S + +D S G SR +
Sbjct: 24 FLKRKIKIKNPCS-----LYVGDLSIYVEESSLMKIFSKIGKVHSIQICRDFSTGISRGY 78
Query: 250 GFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKG 309
+VNF +P A A + LN T+ + + Y +++ LR G
Sbjct: 79 SYVNFLNPKDAQKAFKLLNYYTD-ETLHYKPLRIMWVQKDKSLR-------------FSG 124
Query: 310 A-NLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALN 368
NL++KN+ +++ L +LFS+FG I SCK+ +D++ S G GF + +++ +A+
Sbjct: 125 TGNLFIKNIPRRYDNKSLSKLFSQFGKILSCKIALDENKRSMGYGFVHYKEEKDSKKAIE 184
Query: 369 EMNGKMIGRKPLYVAVAQRKEERKAR 394
+MN I + ++V K +R R
Sbjct: 185 KMNNCFIDGEKIFVGPFISKVKRNNR 210
>gi|146101854|ref|XP_001469222.1| poly(A)-binding protein 2 [Leishmania infantum JPCM5]
gi|398023673|ref|XP_003864998.1| poly(a) binding protein, putative [Leishmania donovani]
gi|134073591|emb|CAM72325.1| poly(A)-binding protein 2 [Leishmania infantum JPCM5]
gi|322503234|emb|CBZ38319.1| poly(a) binding protein, putative [Leishmania donovani]
Length = 585
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 136/381 (35%), Positives = 211/381 (55%), Gaps = 8/381 (2%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
N S++VG L+ ++ E +LYD F ++ V SVRVC D + + SLGY YVN+ +P DA A
Sbjct: 7 NPSIWVGGLDPDLQEQKLYDYFVRIGPVTSVRVCVDSATQKSLGYGYVNFQDPADAEKAL 66
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
+ + + +RI RDPS R+SG N+ +K L S+D AL + F+ FG + +
Sbjct: 67 DQAG-SKLGSRYLRIAKIQRDPSKRRSGVNNILVKKLPKSVDTYALKEMFSKFGRLTAIG 125
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF 206
+A D G+S+GY + FE EE+A +A++ ++GM ++ + + V R Q + + + +F
Sbjct: 126 LACDEKGESRGYARISFEREESAVDAVREMDGMEMDGQAIVVE---RYQAQHRDELLKQF 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRC-FGFVNFQSPDAAAAAVE 265
TN+YV NL VTDE L+ F +G ++SA V +S G+V FQ + AA AVE
Sbjct: 183 TNLYVKNLDPAVTDEKLRAFFAKYGEVSSAKVRDLGAVQSEAGLGYVAFQKHEDAARAVE 242
Query: 266 KLNGTTNN-DKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
+LNG K + RE R + Q R + K NLY+K DD++ E
Sbjct: 243 ELNGKECEISKAGSPLDVSRFRSREERQRDRERQRRERAQQHSKYPNLYVKGFDDTVTSE 302
Query: 325 KLKELFSEFGTITSCKVMVDQH-GFSKGSGFAAFSMPEEATRALNEMNGK-MIGRKPLYV 382
+L+ELF +G S VM+D+ G S+ GF + A++A+ E+NG + +PL+V
Sbjct: 303 RLEELFQRYGETVSVTVMMDKETGVSRCFGFVSMKDQNAASQAIQELNGSTFLSPRPLFV 362
Query: 383 AVAQRKEERKARLQAQFAQIR 403
A RK+ R+ L+ + Q R
Sbjct: 363 TYALRKDARRQNLEERSKQFR 383
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 49/69 (71%)
Query: 549 LTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
L + LA+ +P+ + +LGE+LY + P A+K+TGMLLEMD +E+L++++SP L +
Sbjct: 511 LAAVLANLNPEQQKNVLGERLYSYIVRSHPSVAAKITGMLLEMDNSEILNMLDSPTMLDS 570
Query: 609 KVAEAMAVL 617
K+AEA VL
Sbjct: 571 KIAEAQDVL 579
>gi|401429856|ref|XP_003879410.1| putative poly(a) binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495660|emb|CBZ30966.1| putative poly(a) binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 594
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 214/386 (55%), Gaps = 18/386 (4%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
N S++VG L+ ++ E +LYD F ++ V SVRVC D + + SLGY YVN+ +P DA A
Sbjct: 7 NPSIWVGGLDPDLQEQKLYDYFVRIGPVTSVRVCVDSATQKSLGYGYVNFQDPADAEKAL 66
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
+ + + +RI RDPS R+SG N+ +K L S+D AL + F+ FG + +
Sbjct: 67 DQAG-SKLGSRYLRIAKIQRDPSKRRSGVNNILVKKLPKSVDTYALKEMFSKFGRLTAIG 125
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF 206
+A D G+S+GY + FE EE+A +A++ ++GM ++ + + V R Q + + + +F
Sbjct: 126 LACDEKGESRGYARISFEREESAVDAVREMDGMEMDGQAIVVE---RYQAQHRDELLKQF 182
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRC-FGFVNFQSPDAAAAAVE 265
TN+YV NL VTDE L+ F +G ++SA V +S G+V FQ + AA AVE
Sbjct: 183 TNLYVKNLDPAVTDEKLRAFFAKYGEVSSAKVRDLGAVQSEAGLGYVAFQKHEDAARAVE 242
Query: 266 KLNGTTNNDKVWYVGRA------QKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDD 319
+LNG K + +A + RE R + Q R + K NLY+K DD
Sbjct: 243 ELNG-----KECEIAKAGSPLDVSRFRSREERQRDRERQRRERAQQHSKYPNLYVKGFDD 297
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQH-GFSKGSGFAAFSMPEEATRALNEMNGK-MIGR 377
++ E+L+ELF +G S VM+D+ G S+ GF + A++A+ E+NG +
Sbjct: 298 TVTSERLEELFQRYGETVSVTVMMDKETGVSRCFGFVSMKDQNAASQAIQELNGSTFLSP 357
Query: 378 KPLYVAVAQRKEERKARLQAQFAQIR 403
+PL+V A RK+ R+ L+ + Q R
Sbjct: 358 RPLFVTYALRKDARRQNLEERSKQFR 383
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 49/69 (71%)
Query: 549 LTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
L + LA+ +P+ + +LGE+LY + P A+K+TGMLLEMD +E+L++++SP L +
Sbjct: 520 LAAVLANLNPEQQKNVLGERLYSYIVRSHPSVAAKITGMLLEMDNSEILNMLDSPTMLDS 579
Query: 609 KVAEAMAVL 617
K+AEA VL
Sbjct: 580 KIAEAQDVL 588
>gi|47229361|emb|CAF99349.1| unnamed protein product [Tetraodon nigroviridis]
Length = 380
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 163/409 (39%), Positives = 227/409 (55%), Gaps = 56/409 (13%)
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
M D GKSR FGFV+F+ + A A NG + W QK+ ER+A+L+ KFEQ
Sbjct: 1 MTDDSGKSRGFGFVSFERHEDAQKAD---NGFLKEN--WI----QKKVERQAELKRKFEQ 51
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
+ R + +G NLY+KNLDD I+DE+L++ FS FGTITS KVM++ G SKG GF FS
Sbjct: 52 MKQDRMTRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMLE-GGRSKGFGFVCFS 110
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ----IRAPGG--MSPLA 412
PEEAT+A+ EMNG+++ KPLYVA+AQRKEER+A L Q+ Q +RA ++P
Sbjct: 111 SPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQ 170
Query: 413 SGIP-GYHHGA-PRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNY----IM 466
P GY A P+ + YY AAG Q LRP P + +
Sbjct: 171 PAPPSGYFMTAIPQTQNRGAYYP----------AAGQMAQ------LRPS-PRWPTQGVR 213
Query: 467 PYHLQRQVHPGQRTGVRRSGNTHQMQQPQF--MRNSNQGIRYLDNARNGTDQSVVSMVPV 524
P H Q ++ +R S QM F MR S+Q R + R T
Sbjct: 214 PQHFQ-----NMQSAMRSSAPRPQM----FGSMRPSSQLPRMTSSQRVATQAMGPRAATT 264
Query: 525 PFEVSGMPATPVETPRPVPVPISTLTSALASASP-DDRTRMLGEQLYPLVENIEPVHASK 583
V+ P V + LT+++ +A+P ++ +MLGE+L+PL++ + A K
Sbjct: 265 APSVTANPVRGVSQYKYATGGQEPLTTSMLAAAPLHEQKQMLGERLFPLIQAMHLSLAGK 324
Query: 584 VTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ-----EAAARSDVN 627
+TGMLLE+D +E+LH++ESPE+L++KV EA+AVLQ EAA +S N
Sbjct: 325 ITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKSVTN 373
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 93/162 (57%), Gaps = 16/162 (9%)
Query: 150 DSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ-------ERAQQNV 202
D +G+S+G+GFV FE E AQ A NG L K+ ++ V RQ E+ +Q+
Sbjct: 3 DDSGKSRGFGFVSFERHEDAQKAD---NGFL---KENWIQKKVERQAELKRKFEQMKQDR 56
Query: 203 SPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
++ N+YV NL + + DE L+K F FGTITSA VM + G+S+ FGFV F SP+ A
Sbjct: 57 MTRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMLEG-GRSKGFGFVCFSSPEEA 115
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
AV ++NG K YV AQ++ ER+A L ++ Q S
Sbjct: 116 TKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMAS 157
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N+++KNLD ID++ L F+ FGT+ S KV ++ G+SKG+GFV F + E A A+ +
Sbjct: 64 NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMLE-GGRSKGFGFVCFSSPEEATKAVTEM 122
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLA 215
NG ++ K +YV L R++ER TN Y+ +A
Sbjct: 123 NGRIVATKPLYVALAQRKEERQAH-----LTNQYMQRMA 156
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LYV +L+ +++ +L FS + S +V + + S G+ +V +S+P++A
Sbjct: 60 YQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMLEGGR--SKGFGFVCFSSPEEATK 117
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
A +N + KP+ + + R R++ N +++ +
Sbjct: 118 AVTEMNGRIVATKPLYVALAQRKEE-RQAHLTNQYMQRM 155
>gi|392355792|ref|XP_228576.4| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Rattus norvegicus]
Length = 456
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 125/173 (72%), Gaps = 1/173 (0%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ SLYVGDL V ES LY+ FS ++S+R+CRD+ R SLGYAYVNY P DA
Sbjct: 255 FPTASLYVGDLHPEVTESMLYEKFSPAGPILSIRLCRDKVTRRSLGYAYVNYQQPVDAKR 314
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A E +NF ING+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+AFG +LS
Sbjct: 315 ALETMNFDVINGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILS 374
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
CKVA D G KGYGFV F+ +E+A+ AI LNGM +N ++++VG F +ER
Sbjct: 375 CKVACDEKG-PKGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFKSHKER 426
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 94/183 (51%), Gaps = 6/183 (3%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L + F+ G +LS ++ D +S GY +V ++ A+ A++
Sbjct: 259 SLYVGDLHPEVTESMLYEKFSPAGPILSIRLCRDKVTRRSLGYAYVNYQQPVDAKRALET 318
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +IN + V + R + V NV++ NL +T+ ++ L IF FG I S
Sbjct: 319 MNFDVINGRPVRIMWSQRDPSLRKSGVG----NVFIKNLGKTIDNKALYNIFSAFGNILS 374
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V D G + +GFV+FQ ++A A++ LNG N + +VGR + EREA+ A
Sbjct: 375 CKVACDEKG-PKGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFKSHKEREAERGAW 433
Query: 296 FEQ 298
Q
Sbjct: 434 ARQ 436
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G I S + +D +S + +VN+Q P A A+E
Sbjct: 259 SLYVGDLHPEVTESMLYEKFSPAGPILSIRLCRDKVTRRSLGYAYVNYQQPVDAKRALET 318
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
+N N + + +Q R+ LR K N+++KNL +I+++ L
Sbjct: 319 MNFDVINGRPVRIMWSQ----RDPSLR------------KSGVGNVFIKNLGKTIDNKAL 362
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
+FS FG I SCKV D+ G KG GF F E A RA++ +NG + + ++V +
Sbjct: 363 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFK 421
Query: 387 RKEERKA 393
+ER+A
Sbjct: 422 SHKEREA 428
>gi|293351002|ref|XP_001054954.2| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Rattus norvegicus]
Length = 438
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 125/173 (72%), Gaps = 1/173 (0%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
+ SLYVGDL V ES LY+ FS ++S+R+CRD+ R SLGYAYVNY P DA
Sbjct: 237 FPTASLYVGDLHPEVTESMLYEKFSPAGPILSIRLCRDKVTRRSLGYAYVNYQQPVDAKR 296
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A E +NF ING+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+AFG +LS
Sbjct: 297 ALETMNFDVINGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILS 356
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
CKVA D G KGYGFV F+ +E+A+ AI LNGM +N ++++VG F +ER
Sbjct: 357 CKVACDEKG-PKGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFKSHKER 408
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 94/183 (51%), Gaps = 6/183 (3%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L + F+ G +LS ++ D +S GY +V ++ A+ A++
Sbjct: 241 SLYVGDLHPEVTESMLYEKFSPAGPILSIRLCRDKVTRRSLGYAYVNYQQPVDAKRALET 300
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +IN + V + R + V NV++ NL +T+ ++ L IF FG I S
Sbjct: 301 MNFDVINGRPVRIMWSQRDPSLRKSGVG----NVFIKNLGKTIDNKALYNIFSAFGNILS 356
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V D G + +GFV+FQ ++A A++ LNG N + +VGR + EREA+ A
Sbjct: 357 CKVACDEKGP-KGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFKSHKEREAERGAW 415
Query: 296 FEQ 298
Q
Sbjct: 416 ARQ 418
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 18/195 (9%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G I S + +D +S + +VN+Q P A A+E
Sbjct: 241 SLYVGDLHPEVTESMLYEKFSPAGPILSIRLCRDKVTRRSLGYAYVNYQQPVDAKRALET 300
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
+N N + + +Q R+ LR K N+++KNL +I+++ L
Sbjct: 301 MNFDVINGRPVRIMWSQ----RDPSLR------------KSGVGNVFIKNLGKTIDNKAL 344
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
+FS FG I SCKV D+ G KG GF F E A RA++ +NG + + ++V +
Sbjct: 345 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFK 403
Query: 387 RKEERKARLQAQFAQ 401
+ER+A A Q
Sbjct: 404 SHKEREAERGAWARQ 418
>gi|190405722|gb|EDV08989.1| poly(A) binding protein [Saccharomyces cerevisiae RM11-1a]
Length = 262
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 102/185 (55%), Positives = 133/185 (71%), Gaps = 2/185 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDLE +V+E+ LYD+FS + V S+RVCRD ++SLGYAYVN+++ + A E
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LN+ PI G+ RIM+S RDPS+RK G GN+FIKNL IDNKAL DTF+ FG +LS K+A
Sbjct: 99 LNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIA 158
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKF 206
D NG+SKG+GFV FE E AA+ AI LNGML+N +++YV + R+ER Q +
Sbjct: 159 TDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHY 218
Query: 207 TNVYV 211
TN+YV
Sbjct: 219 TNLYV 223
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 104/198 (52%), Gaps = 17/198 (8%)
Query: 200 QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRC-FGFVNFQSPD 258
Q+V ++YV +L +V++ L IF G+++S V +D+ K+ + +VNF +
Sbjct: 31 QSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHE 90
Query: 259 AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
A A+E+LN T ++ + +Q R+ LR K N+++KNL
Sbjct: 91 AGRKAIEQLNYTPIKGRLCRIMWSQ----RDPSLRKK------------GSGNIFIKNLH 134
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
I+++ L + FS FG I S K+ D++G SKG GF F A A++ +NG ++ +
Sbjct: 135 PDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQ 194
Query: 379 PLYVAVAQRKEERKARLQ 396
+YVA ++ER ++L+
Sbjct: 195 EIYVAPHLSRKERDSQLE 212
>gi|380799249|gb|AFE71500.1| polyadenylate-binding protein 5, partial [Macaca mulatta]
Length = 256
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 121/253 (47%), Positives = 174/253 (68%), Gaps = 5/253 (1%)
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
+AFG +LSCKV D NG SKGY +V F++ AA AI +NG+ +N++QVYVG F +E
Sbjct: 1 SAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEE 59
Query: 197 RAQQNVS---PKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVN 253
RA + + FTNV+V N+ + + DE LK++F +G S V++D+ GKS+ FGFV
Sbjct: 60 RAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVR 119
Query: 254 FQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLY 313
+++ +AA AV L+G + + KV YVGRAQK+ ER A+LR +FE+ R+ + G +Y
Sbjct: 120 YETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIY 179
Query: 314 LKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGK 373
+KNLD++INDEKLKE FS FG+I+ KVM++ G KG G FS EEAT+A++EMNG+
Sbjct: 180 IKNLDETINDEKLKEEFSSFGSISRAKVMMEV-GQGKGFGVVCFSSFEEATKAVDEMNGR 238
Query: 374 MIGRKPLYVAVAQ 386
++G KPL+V + Q
Sbjct: 239 VVGSKPLHVTLGQ 251
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 140/259 (54%), Gaps = 24/259 (9%)
Query: 49 SQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPI---RIMY-S 104
S ++S +V D + S GYAYV++ + A A +N + +N + + R +
Sbjct: 1 SAFGNILSCKVVCDDN--GSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPE 58
Query: 105 HRDPSIR---KSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFV 161
R +R ++ + NVF+KN+ ID++ L + F +G S KV D++G+SKG+GFV
Sbjct: 59 ERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFV 118
Query: 162 QFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER------------AQQNVSPKFTNV 209
++E EAAQ A+ L+G I+ K +YVG ++ ER ++ P +
Sbjct: 119 RYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPI 178
Query: 210 YVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNG 269
Y+ NL ET+ DE LK+ F FG+I+ A VM + G+ + FG V F S + A AV+++NG
Sbjct: 179 YIKNLDETINDEKLKEEFSSFGSISRAKVMMEV-GQGKGFGVVCFSSFEEATKAVDEMNG 237
Query: 270 TTNNDKVWYV--GRAQKRA 286
K +V G+A++R
Sbjct: 238 RVVGSKPLHVTLGQARRRC 256
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 96/164 (58%), Gaps = 10/164 (6%)
Query: 230 FGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAERE 289
FG I S V+ D +G S+ + +V+F S AA A+ +NG N++ YVGR + ER
Sbjct: 3 FGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERA 61
Query: 290 ADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFS 349
A++R + ++ N+++KN+ D I+DEKLKELF E+G S KV+ D G S
Sbjct: 62 AEVRTR---------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKS 112
Query: 350 KGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
KG GF + E A +A+ +++GK I K LYV AQ+K ER A
Sbjct: 113 KGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLA 156
>gi|14906166|gb|AAK72507.1| putative polyadenylate-binding protein [Aedes aegypti]
Length = 289
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 122/249 (48%), Positives = 167/249 (67%), Gaps = 17/249 (6%)
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
FTNVYV + + + DE LK++F +GTITS VM DGK R FGFV F++P++A AV+
Sbjct: 6 FTNVYVKDFGDELNDETLKEMFEKYGTITSHRVM-IKDGKGRGFGFVAFENPESAEHAVQ 64
Query: 266 KLNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
+LNG + K+ YVGRAQK+ ER+ +L+ +FEQ ++ R + +G NLY+KNLDDSI+DE
Sbjct: 65 ELNGKELGEGKILYVGRAQKKNERQMELKRRFEQLKMERLTRYQGVNLYVKNLDDSIDDE 124
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSM-PEEATRALNEMNGKMIGRKPLYVA 383
+L++ FS FGTITS KVM+++ G SKG GF FS EEAT+A+ EMNG+++G KPLYVA
Sbjct: 125 RLRKEFSPFGTITSAKVMLEE-GRSKGFGFVLFSQHAEEATKAVTEMNGRIVGSKPLYVA 183
Query: 384 VAQRKEERKARLQAQFAQIRAPGGMSPLAS-----GIPGYHHGAPRL-GPQQLYYGQ--- 434
+AQR E+RKA L +Q+ Q A M + G GY+ P L PQ+ + Q
Sbjct: 184 LAQRTEDRKAHLASQYMQRMANMRMQHMGQIFQPGGNGGYY--VPTLPQPQRFFSKQVSQ 241
Query: 435 --GTPGLMP 441
TPG +P
Sbjct: 242 IRTTPGWLP 250
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 119/199 (59%), Gaps = 18/199 (9%)
Query: 115 YGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIK 174
+ NV++K+ ++++ L + F +GT+ S +V I +G+ +G+GFV FEN E+A++A++
Sbjct: 6 FTNVYVKDFGDELNDETLKEMFEKYGTITSHRVMI-KDGKGRGFGFVAFENPESAEHAVQ 64
Query: 175 MLNGMLIND-KQVYVGLFVRRQERAQQNVSPKF-------------TNVYVNNLAETVTD 220
LNG + + K +YVG ++ ER Q + +F N+YV NL +++ D
Sbjct: 65 ELNGKELGEGKILYVGRAQKKNER-QMELKRRFEQLKMERLTRYQGVNLYVKNLDDSIDD 123
Query: 221 EDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNF-QSPDAAAAAVEKLNGTTNNDKVWYV 279
E L+K F FGTITSA VM + +G+S+ FGFV F Q + A AV ++NG K YV
Sbjct: 124 ERLRKEFSPFGTITSAKVMLE-EGRSKGFGFVLFSQHAEEATKAVTEMNGRIVGSKPLYV 182
Query: 280 GRAQKRAEREADLRAKFEQ 298
AQ+ +R+A L +++ Q
Sbjct: 183 ALAQRTEDRKAHLASQYMQ 201
>gi|326430719|gb|EGD76289.1| polyadenylate binding protein [Salpingoeca sp. ATCC 50818]
Length = 642
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/370 (37%), Positives = 199/370 (53%), Gaps = 44/370 (11%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL VNE++L++LFS + V+SVRVCRDQ RSSLGY YVN++ +DA A
Sbjct: 71 SLYVGDLSPQVNETELFNLFSSIGSVMSVRVCRDQITRSSLGYGYVNFNKAEDAEAAMGQ 130
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF ++G+ IRIM RDP R+SG GN+FI L + L DTF FG +LSCK
Sbjct: 131 LNFHDLHGRHIRIMKVERDPKKRRSGVGNIFISGLPADTTSVHLRDTFEQFGKILSCKAV 190
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLI-NDKQVYVGLFVRRQER--AQQNVSPK 205
+D +G+ +G+GFV FE+ + A+ AI NG D+++ V F R++R Q+ +
Sbjct: 191 LDHSGRCRGFGFVHFEDPKVAERAIAEANGKDAGGDRKLRVAPFKPRKQREQEQEERTKN 250
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV----MKDSDGKSRCFGFVNFQSPDAAA 261
FTNVYV +L +E+L K+F +G ITS + +KD++ R +GFVNF +AA
Sbjct: 251 FTNVYVKSLRRGADEEELGKLFEPYGDITSKALRTYKLKDTE---RPYGFVNFADTEAAQ 307
Query: 262 AAVEKLNGTTNNDKVWYV-GRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
VE+ G + ++YV G A + ++ D + E+ G+ + +L
Sbjct: 308 KCVEE--GEMHQRDIFYVDGMAFEEGKKVEDF--------VKTVEECAGSEVERHHL--Q 355
Query: 321 INDEKLKE--LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
+ D KL LF E G T K M +PE+ A + I +
Sbjct: 356 VADGKLSGFILFKEHGEETVDKAMT--------------GLPEKMEAATDH-----ISKA 396
Query: 379 PLYVAVAQRK 388
LYV AQ+K
Sbjct: 397 KLYVQRAQKK 406
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 188/429 (43%), Gaps = 70/429 (16%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ ++ L + L D F Q +++S + D S R G+ +V++ +P+ A
Sbjct: 155 SGVGNI--FISGLPADTTSVHLRDTFEQFGKILSCKAVLDHSGRCR-GFGFVHFEDPKVA 211
Query: 83 ------ANAKEA-----LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
AN K+A L P + R ++ R + NV++K+L D +
Sbjct: 212 ERAIAEANGKDAGGDRKLRVAPFKPRKQR----EQEQEERTKNFTNVYVKSLRRGADEEE 267
Query: 132 LCDTFAAFGTVLSCKV-AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L F +G + S + + YGFV F + EAAQ ++
Sbjct: 268 LGKLFEPYGDITSKALRTYKLKDTERPYGFVNFADTEAAQKCVE---------------- 311
Query: 191 FVRRQERAQQNVSPKFTNVYVNNLA--ETVTDEDLKKIFGHF-GTITSAIVMKDSDGKSR 247
E Q+++ YV+ +A E ED K G+ ++ +DGK
Sbjct: 312 ---EGEMHQRDI------FYVDGMAFEEGKKVEDFVKTVEECAGSEVERHHLQVADGKLS 362
Query: 248 CFGFVNF-----QSPDAAAAAV-EKLNGTTNN--DKVWYVGRAQKRAEREADLRAKFEQE 299
GF+ F ++ D A + EK+ T++ YV RAQK+ ER LR + +
Sbjct: 363 --GFILFKEHGEETVDKAMTGLPEKMEAATDHISKAKLYVQRAQKKQERIRRLRRR--LQ 418
Query: 300 RISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSM 359
R + +G NLY+KN ++++ +E L++ F E G + S KVM D+ G S+ GF F+
Sbjct: 419 ERRRELRQRGGNLYVKNFNENVTEEDLRKFFEECGHVMSVKVMRDKEGVSRCFGFVTFAT 478
Query: 360 PEEATRALNEMNGKMIGRKPLYVAVA-QRKEERKARLQAQFAQIRAPGGMSPLASGIPGY 418
EEA A+ + N + + +P+YVA R+E A + P +P +
Sbjct: 479 REEAESAIAKKNRQPLQDRPIYVAFHLTRQEAAAAPTAPTAGHVHVP--------AVPRH 530
Query: 419 HHG--APRL 425
HG PRL
Sbjct: 531 AHGRVWPRL 539
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSK-GSGFAAFSMPEEATRALN 368
A+LY+ +L +N+ +L LFS G++ S +V DQ S G G+ F+ E+A A+
Sbjct: 70 ASLYVGDLSPQVNETELFNLFSSIGSVMSVRVCRDQITRSSLGYGYVNFNKAEDAEAAMG 129
Query: 369 EMN 371
++N
Sbjct: 130 QLN 132
>gi|12836631|dbj|BAB23742.1| unnamed protein product [Mus musculus]
Length = 168
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/162 (62%), Positives = 123/162 (75%), Gaps = 1/162 (0%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 8 YPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS 144
A + +NF I GKP+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LS
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQV 186
CKV D NG SKGYGFV FE +EAA+ AI+ +NGML+ND++V
Sbjct: 128 CKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKV 168
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 88/169 (52%), Gaps = 18/169 (10%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G I S V +D +S + +VNFQ P A A++
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
+N K + +Q R+ LR K N+++KNLD SI+++ L
Sbjct: 72 MNFDVIKGKPVRIMWSQ----RDPSLR------------KSGVGNIFIKNLDKSIDNKAL 115
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI 375
+ FS FG I SCKV+ D++G SKG GF F E A RA+ +MNG ++
Sbjct: 116 YDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLL 163
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 6/170 (3%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I K V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDK 275
F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG ND+
Sbjct: 118 TFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDR 166
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITS---CKVMVDQHGFSKGSGFAAFSMPEEATRA 366
A+LY+ +L + + L E FS G I S C+ M+ + S G + F P +A RA
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRR--SLGYAYVNFQQPADAERA 68
Query: 367 LNEMNGKMIGRKPLYVAVAQR 387
L+ MN +I KP+ + +QR
Sbjct: 69 LDTMNFDVIKGKPVRIMWSQR 89
>gi|326430672|gb|EGD76242.1| polyadenylate binding protein [Salpingoeca sp. ATCC 50818]
Length = 765
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/370 (37%), Positives = 199/370 (53%), Gaps = 44/370 (11%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL VNE++L++LFS + V+SVRVCRDQ RSSLGY YVN++ +DA A
Sbjct: 80 SLYVGDLSPQVNETELFNLFSSIGSVMSVRVCRDQITRSSLGYGYVNFNKAEDAEAAMGQ 139
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF ++G+ IRIM RDP R+SG GN+FI L + L DTF FG +LSCK
Sbjct: 140 LNFHDLHGRHIRIMKVERDPKKRRSGVGNIFISGLPADTTSVHLRDTFEQFGKILSCKAV 199
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLI-NDKQVYVGLFVRRQER--AQQNVSPK 205
+D +G+ +G+GFV FE+ + A+ AI NG D+++ V F R++R Q+ +
Sbjct: 200 LDHSGRCRGFGFVHFEDPKVAERAIAEANGKDAGGDRKLRVAPFKPRKQREQEQEERTKN 259
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV----MKDSDGKSRCFGFVNFQSPDAAA 261
FTNVYV +L +E+L K+F +G ITS + +KD++ R +GFVNF +AA
Sbjct: 260 FTNVYVKSLRRDADEEELGKLFEPYGDITSKALRTYKLKDTE---RPYGFVNFADTEAAQ 316
Query: 262 AAVEKLNGTTNNDKVWYV-GRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
VE+ G + ++YV G A + ++ D + E+ G+ + +L
Sbjct: 317 KCVEE--GEMHQRDIFYVDGMAFEEGKKVEDF--------VKTVEECAGSEVERHHL--Q 364
Query: 321 INDEKLKE--LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
+ D KL LF E G T K M +PE+ A + I +
Sbjct: 365 VADGKLSGFILFKEHGEETVDKAMT--------------GLPEKMEAATDH-----ISKA 405
Query: 379 PLYVAVAQRK 388
LYV AQ+K
Sbjct: 406 KLYVQRAQKK 415
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 130/470 (27%), Positives = 205/470 (43%), Gaps = 70/470 (14%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ ++ L + L D F Q +++S + D S R G+ +V++ +P+ A
Sbjct: 164 SGVGNI--FISGLPADTTSVHLRDTFEQFGKILSCKAVLDHSGRCR-GFGFVHFEDPKVA 220
Query: 83 ------ANAKEA-----LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKA 131
AN K+A L P + R ++ R + NV++K+L D +
Sbjct: 221 ERAIAEANGKDAGGDRKLRVAPFKPRKQR----EQEQEERTKNFTNVYVKSLRRDADEEE 276
Query: 132 LCDTFAAFGTVLSCKV-AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L F +G + S + + YGFV F + EAAQ ++
Sbjct: 277 LGKLFEPYGDITSKALRTYKLKDTERPYGFVNFADTEAAQKCVE---------------- 320
Query: 191 FVRRQERAQQNVSPKFTNVYVNNLA--ETVTDEDLKKIFGHF-GTITSAIVMKDSDGKSR 247
E Q+++ YV+ +A E ED K G+ ++ +DGK
Sbjct: 321 ---EGEMHQRDI------FYVDGMAFEEGKKVEDFVKTVEECAGSEVERHHLQVADGK-- 369
Query: 248 CFGFVNF-----QSPDAAAAAV-EKLNGTTNN--DKVWYVGRAQKRAEREADLRAKFEQE 299
GF+ F ++ D A + EK+ T++ YV RAQK+ ER LR + +
Sbjct: 370 LSGFILFKEHGEETVDKAMTGLPEKMEAATDHISKAKLYVQRAQKKQERIRRLRRR--LQ 427
Query: 300 RISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSM 359
R + +G NL++KN ++++ +E L++ F E G + S KVM D+ G S+ GF F+
Sbjct: 428 ERRRELRQRGGNLFVKNFNENVTEEDLRKFFEECGHVMSVKVMRDKEGVSRCFGFVTFAT 487
Query: 360 PEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGG-MSPLASGIPGY 418
EEA A+ + N + + +P+YVA ++ER+AR Q Q Q G M P G+P
Sbjct: 488 REEAESAIAKKNRQPLQDRPIYVAFHLTRQERQARKQQQHPQHPQQGMYMYPQYPGMPMG 547
Query: 419 HHGAPRLGPQQLYYGQGTPGLM--PPQAAGYGFQQQVFPGLRPGGPNYIM 466
G PQ + P M P QA G GGPN M
Sbjct: 548 AFGPGYYNPQMMMVNPQMPRAMNFPAQAGNRGGP--------VGGPNRYM 589
>gi|341883809|gb|EGT39744.1| hypothetical protein CAEBREN_05859 [Caenorhabditis brenneri]
Length = 467
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 189/312 (60%), Gaps = 23/312 (7%)
Query: 179 MLINDKQVYVGLFVRRQERAQQN-----VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTI 233
ML+ K+V+VG F Q RAQ+N + K+TNVYV N + E L+K+F +GTI
Sbjct: 1 MLLAGKKVFVGKF---QPRAQRNRELGETAKKYTNVYVKNFGDHYNKESLEKLFAKYGTI 57
Query: 234 TSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGT--TNNDKVWYVGRAQKRAEREAD 291
TS VM SDGKS+ FGFV F P+ A AAV+ LN + +D +V RAQK++ER A+
Sbjct: 58 TSCDVM-TSDGKSKGFGFVAFAEPEEAEAAVQALNDSPVEGSDLKLHVCRAQKKSERHAE 116
Query: 292 LRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKG 351
L+ K EQ ++ R +K +G NLY+KNLD+S++DE LK+ F FG ITS KVM D++G SKG
Sbjct: 117 LKKKHEQHKVERMQKYQGVNLYVKNLDESVDDEALKKQFESFGNITSAKVMTDENGRSKG 176
Query: 352 SGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPL 411
GF F PEEAT A+ EMN KM+ KPLYVA+AQRKE+R+A+L +Q+ Q A M
Sbjct: 177 FGFVCFEKPEEATTAVTEMNSKMVCSKPLYVALAQRKEDRRAQLASQYMQRLASMRMH-- 234
Query: 412 ASGIPGYHHGAPRLGPQQLYYGQGTPGLMP-PQAAGYGFQQQVFPGLRPGGPNYIMPYHL 470
+ +PG G L PQQ G G P Q +G Q V PG R G N Y +
Sbjct: 235 -TNVPG---GG--LYPQQPQPGPGYYVANPMQQQRNFGGPQMVRPGGRWGPQNQ---YPV 285
Query: 471 QRQVHPGQRTGV 482
Q Q Q GV
Sbjct: 286 QNQYMMAQGPGV 297
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 119/215 (55%), Gaps = 17/215 (7%)
Query: 115 YGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIK 174
Y NV++KN + ++L FA +GT+ SC V + S+G+SKG+GFV F E A+ A++
Sbjct: 30 YTNVYVKNFGDHYNKESLEKLFAKYGTITSCDV-MTSDGKSKGFGFVAFAEPEEAEAAVQ 88
Query: 175 MLNGMLI--NDKQVYVGLFVRRQER--------AQQNVSP----KFTNVYVNNLAETVTD 220
LN + +D +++V ++ ER Q V + N+YV NL E+V D
Sbjct: 89 ALNDSPVEGSDLKLHVCRAQKKSERHAELKKKHEQHKVERMQKYQGVNLYVKNLDESVDD 148
Query: 221 EDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVG 280
E LKK F FG ITSA VM D +G+S+ FGFV F+ P+ A AV ++N K YV
Sbjct: 149 EALKKQFESFGNITSAKVMTDENGRSKGFGFVCFEKPEEATTAVTEMNSKMVCSKPLYVA 208
Query: 281 RAQKRAEREADLRAKFEQERIS--RYEKLKGANLY 313
AQ++ +R A L +++ Q S + + G LY
Sbjct: 209 LAQRKEDRRAQLASQYMQRLASMRMHTNVPGGGLY 243
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y NV YV + + N+ L LF++ + S V K S G+ +V ++ P++A
Sbjct: 30 YTNV--YVKNFGDHYNKESLEKLFAKYGTITSCDVMTSDGK--SKGFGFVAFAEPEEAEA 85
Query: 85 AKEALNFMPINGKPIRIMYS------------------HRDPSIRKSGYGNVFIKNLDTS 126
A +ALN P+ G +++ H+ ++K N+++KNLD S
Sbjct: 86 AVQALNDSPVEGSDLKLHVCRAQKKSERHAELKKKHEQHKVERMQKYQGVNLYVKNLDES 145
Query: 127 IDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQV 186
+D++AL F +FG + S KV D NG+SKG+GFV FE E A A+ +N ++ K +
Sbjct: 146 VDDEALKKQFESFGNITSAKVMTDENGRSKGFGFVCFEKPEEATTAVTEMNSKMVCSKPL 205
Query: 187 YVGLFVRRQERAQQNVS 203
YV L R+++R Q S
Sbjct: 206 YVALAQRKEDRRAQLAS 222
>gi|395754119|ref|XP_002831853.2| PREDICTED: uncharacterized protein LOC100437512 [Pongo abelii]
Length = 528
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 124/170 (72%), Gaps = 1/170 (0%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL V E+ LY+ FS ++S+R+CRD+ R SLGYAYVNY P DA A E
Sbjct: 330 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 389
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LNF I G+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+AFG +LSCKV
Sbjct: 390 TLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKV 449
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
A D G KGYGFV F+ +E+A+ AI ++NGM +N ++++VG F +ER
Sbjct: 450 ACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKER 498
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 95/195 (48%), Gaps = 18/195 (9%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G I S + +D +S + +VN+Q P A A+E
Sbjct: 331 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 390
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
LN + + +Q R+ LR K N+++KNL +I+++ L
Sbjct: 391 LNFDVIKGRPVRIMWSQ----RDPSLR------------KSGVGNVFIKNLGKTIDNKAL 434
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
+FS FG I SCKV D+ G KG GF F E A RA++ MNG + + ++V +
Sbjct: 435 YNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFK 493
Query: 387 RKEERKARLQAQFAQ 401
+ER+A A Q
Sbjct: 494 SHKEREAERGAWARQ 508
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 6/183 (3%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L + F+ G +LS ++ D +S GY +V ++ A+ A++
Sbjct: 331 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 390
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN +I + V + R + V NV++ NL +T+ ++ L IF FG I S
Sbjct: 391 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----NVFIKNLGKTIDNKALYNIFSAFGNILS 446
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V D G + +GFV+FQ ++A A++ +NG N + +VGR + EREA+ A
Sbjct: 447 CKVACDEKGP-KGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAERGAW 505
Query: 296 FEQ 298
Q
Sbjct: 506 ARQ 508
>gi|449486336|ref|XP_004177123.1| PREDICTED: embryonic polyadenylate-binding protein A-like
[Taeniopygia guttata]
Length = 167
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 100/163 (61%), Positives = 122/163 (74%), Gaps = 1/163 (0%)
Query: 24 GYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAA 83
GY SLYVGDL +V E+ LY+ FS ++S+RVCRD + R SLGYAY+N+ P DA
Sbjct: 6 GYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAE 65
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A + +NF I G+PIRIM+S RDP +RKSG GNVFIKNLD SIDNKAL DTF+AFG +L
Sbjct: 66 RALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGNIL 125
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQV 186
SCKV D NG S+GYGFV FE EAA AI+ +NGML+ND++V
Sbjct: 126 SCKVVCDENG-SRGYGFVHFETHEAATRAIETMNGMLLNDRKV 167
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 18/171 (10%)
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-SDGKSRCFGFVNFQSPDAAAAAV 264
++YV +L VT+ L + F G I S V +D + +S + ++NFQ P A A+
Sbjct: 9 LASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERAL 68
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
+ +N + + +Q R+ LR K N+++KNLDDSI+++
Sbjct: 69 DTMNFEVIKGRPIRIMWSQ----RDPGLR------------KSGVGNVFIKNLDDSIDNK 112
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI 375
L + FS FG I SCKV+ D++G S+G GF F E ATRA+ MNG ++
Sbjct: 113 ALYDTFSAFGNILSCKVVCDENG-SRGYGFVHFETHEAATRAIETMNGMLL 162
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 85/160 (53%), Gaps = 6/160 (3%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L + F+ G ++S +V D + +S GY ++ F+ A+ A+
Sbjct: 11 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALDT 70
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +I + + + R + V NV++ NL +++ ++ L F FG I S
Sbjct: 71 MNFEVIKGRPIRIMWSQRDPGLRKSGVG----NVFIKNLDDSIDNKALYDTFSAFGNILS 126
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDK 275
V+ D +G SR +GFV+F++ +AA A+E +NG ND+
Sbjct: 127 CKVVCDENG-SRGYGFVHFETHEAATRAIETMNGMLLNDR 165
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD-QHGFSKGSGFAAFSMPEEATRALN 368
A+LY+ +L + + L E FS G I S +V D S G + F P +A RAL+
Sbjct: 10 ASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALD 69
Query: 369 EMNGKMIGRKPLYVAVAQR 387
MN ++I +P+ + +QR
Sbjct: 70 TMNFEVIKGRPIRIMWSQR 88
>gi|426396432|ref|XP_004064447.1| PREDICTED: uncharacterized protein LOC101125114 [Gorilla gorilla
gorilla]
Length = 533
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 124/170 (72%), Gaps = 1/170 (0%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL V E+ LY+ FS ++S+R+CRD+ R SLGYAYVNY P DA A E
Sbjct: 335 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 394
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LNF I G+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+AFG +LSCKV
Sbjct: 395 TLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKV 454
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
A D G KGYGFV F+ +E+A+ AI ++NGM +N ++++VG F +ER
Sbjct: 455 ACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKER 503
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 18/198 (9%)
Query: 205 KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAA 263
+ ++YV +L VT+ L + F G I S + +D +S + +VN+Q P A A
Sbjct: 333 QMASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRA 392
Query: 264 VEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIND 323
+E LN + + +Q R+ LR K N+++KNL +I++
Sbjct: 393 LETLNFDVIKGRPVRIMWSQ----RDPSLR------------KSGVGNVFIKNLGKTIDN 436
Query: 324 EKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVA 383
+ L +FS FG I SCKV D+ G KG GF F E A RA++ MNG + + ++V
Sbjct: 437 KALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVG 495
Query: 384 VAQRKEERKARLQAQFAQ 401
+ +ER+A A Q
Sbjct: 496 RFKSHKEREAERGAWARQ 513
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 6/183 (3%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L + F+ G +LS ++ D +S GY +V ++ A+ A++
Sbjct: 336 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 395
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN +I + V + R + V NV++ NL +T+ ++ L IF FG I S
Sbjct: 396 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----NVFIKNLGKTIDNKALYNIFSAFGNILS 451
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V D G + +GFV+FQ ++A A++ +NG N + +VGR + EREA+ A
Sbjct: 452 CKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAERGAW 510
Query: 296 FEQ 298
Q
Sbjct: 511 ARQ 513
>gi|441675859|ref|XP_003280927.2| PREDICTED: uncharacterized protein LOC100588478 [Nomascus
leucogenys]
Length = 485
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 134/196 (68%), Gaps = 3/196 (1%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL V E+ LY+ FS ++S+R+CRD+ R SLGYAYVNY P DA A E
Sbjct: 287 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 346
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LNF I G+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+AFG +LSCKV
Sbjct: 347 TLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKV 406
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQN--VSPK 205
A D G KGYGFV F+ +E+A+ AI ++NGM +N ++++VG F +ER + + +
Sbjct: 407 ACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAERGAWARQ 465
Query: 206 FTNVYVNNLAETVTDE 221
T+ V + E +E
Sbjct: 466 STSADVKDFEEDTDEE 481
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 18/189 (9%)
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAV 264
++YV +L VT+ L + F G I S + +D +S + +VN+Q P A A+
Sbjct: 286 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 345
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
E LN + + +Q R+ LR K N+++KNL +I+++
Sbjct: 346 ETLNFDVIKGRPVRIMWSQ----RDPSLR------------KSGVGNVFIKNLGKTIDNK 389
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
L +FS FG I SCKV D+ G KG GF F E A RA++ MNG + + ++V
Sbjct: 390 ALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGR 448
Query: 385 AQRKEERKA 393
+ +ER+A
Sbjct: 449 FKSHKEREA 457
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L + F+ G +LS ++ D +S GY +V ++ A+ A++
Sbjct: 288 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 347
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN +I + V + R + V NV++ NL +T+ ++ L IF FG I S
Sbjct: 348 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----NVFIKNLGKTIDNKALYNIFSAFGNILS 403
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
V D G + +GFV+FQ ++A A++ +NG N + +VGR + EREA+
Sbjct: 404 CKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAE 458
>gi|344281910|ref|XP_003412719.1| PREDICTED: hypothetical protein LOC100664266 [Loxodonta africana]
Length = 708
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 96/171 (56%), Positives = 124/171 (72%), Gaps = 1/171 (0%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
SLYVGDL V E+ LY+ FS +++S+R+CRD+ R SLGYAYVNY P DA A
Sbjct: 350 TASLYVGDLHPEVTEAMLYEKFSPAGRILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 409
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LNF I G+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+ FG +LSCK
Sbjct: 410 ETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSTFGNILSCK 469
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
VA D G KGYGFV F+ +E+A+ AI ++NGM +N ++++VG F +ER
Sbjct: 470 VACDEKG-PKGYGFVHFQEQESAERAIDVMNGMFLNYRKIFVGRFKSHKER 519
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 24/223 (10%)
Query: 188 VGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKS 246
+G++ +R A + P ++YV +L VT+ L + F G I S + +D +S
Sbjct: 334 MGIYTKRIISASPD--PPTASLYVGDLHPEVTEAMLYEKFSPAGRILSIRICRDKITRRS 391
Query: 247 RCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK 306
+ +VN+Q P A A+E LN + + +Q R+ LR K
Sbjct: 392 LGYAYVNYQQPVDAKRALETLNFDVIKGRPVRIMWSQ----RDPSLR------------K 435
Query: 307 LKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRA 366
N+++KNL +I+++ L +FS FG I SCKV D+ G KG GF F E A RA
Sbjct: 436 SGVGNVFIKNLGKTIDNKALYNIFSTFGNILSCKVACDEKG-PKGYGFVHFQEQESAERA 494
Query: 367 LNEMNGKMIGRKPLYVAVAQRKEERKA----RLQAQFAQIRAP 405
++ MNG + + ++V + +ER++ +L A +R P
Sbjct: 495 IDVMNGMFLNYRKIFVGRFKSHKERESWSDPQLPAWGGALRTP 537
>gi|119627672|gb|EAX07267.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_g [Homo sapiens]
Length = 338
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/196 (54%), Positives = 133/196 (67%), Gaps = 6/196 (3%)
Query: 20 AVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
A S Y SLYVGDL +V E+ LY+ FS V+S+RVCRD R SLGYAYVN+ P
Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
DA A + +NF I GKPIRIM+S RDPS+RKSG GNVFIKNLD SIDNKAL DTF+AF
Sbjct: 63 ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 122
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ 199
G +LSCKV ++ +G+SKG+GFV F + E A A+ +NG ++ K +YV L R++ER
Sbjct: 123 GNILSCKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKA 181
Query: 200 QNVSPKFTNVYVNNLA 215
TN Y+ +A
Sbjct: 182 H-----LTNQYMQRVA 192
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 113/197 (57%), Gaps = 18/197 (9%)
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAV 264
++YV +L VT+ L + F G + S V +D +S + +VNFQ P A A+
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
+ +N K + +Q R+ LR K N+++KNLD SI+++
Sbjct: 70 DTMNFDVIKGKPIRIMWSQ----RDPSLR------------KSGVGNVFIKNLDKSIDNK 113
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
L + FS FG I SCKVM++ G SKG GF FS PEEAT+A+ EMNG+++G KPLYVA+
Sbjct: 114 ALYDTFSAFGNILSCKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVAL 172
Query: 385 AQRKEERKARLQAQFAQ 401
AQRKEERKA L Q+ Q
Sbjct: 173 AQRKEERKAHLTNQYMQ 189
>gi|344281908|ref|XP_003412718.1| PREDICTED: hypothetical protein LOC100663984 [Loxodonta africana]
Length = 640
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 96/171 (56%), Positives = 124/171 (72%), Gaps = 1/171 (0%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
SLYVGDL V E+ LY+ FS +++S+R+CRD+ R SLGYAYVNY P DA A
Sbjct: 441 TASLYVGDLHPEVTEAMLYEKFSPAGRILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 500
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
E LNF I G+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+ FG +LSCK
Sbjct: 501 ETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSTFGNILSCK 560
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
VA D G KGYGFV F+ +E+A+ AI ++NGM +N ++++VG F +ER
Sbjct: 561 VACDEKG-PKGYGFVHFQEQESAERAIDVMNGMFLNYRKIFVGRFKSHKER 610
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 28/211 (13%)
Query: 188 VGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKS 246
+G++ +R A + P ++YV +L VT+ L + F G I S + +D +S
Sbjct: 425 MGIYTKRIISASPD--PPTASLYVGDLHPEVTEAMLYEKFSPAGRILSIRICRDKITRRS 482
Query: 247 RCFGFVNFQSPDAAAAAVEKLNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERIS 302
+ +VN+Q P A A+E LN + +W ++R+ LR
Sbjct: 483 LGYAYVNYQQPVDAKRALETLNFDVIKGRPVRIMW--------SQRDPSLR--------- 525
Query: 303 RYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEE 362
K N+++KNL +I+++ L +FS FG I SCKV D+ G KG GF F E
Sbjct: 526 ---KSGVGNVFIKNLGKTIDNKALYNIFSTFGNILSCKVACDEKG-PKGYGFVHFQEQES 581
Query: 363 ATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
A RA++ MNG + + ++V + +ER+A
Sbjct: 582 AERAIDVMNGMFLNYRKIFVGRFKSHKEREA 612
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 100 RIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGY 158
RI+ + DP ++++ +L + L + F+ G +LS ++ D +S GY
Sbjct: 431 RIISASPDPPT-----ASLYVGDLHPEVTEAMLYEKFSPAGRILSIRICRDKITRRSLGY 485
Query: 159 GFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETV 218
+V ++ A+ A++ LN +I + V + R + V NV++ NL +T+
Sbjct: 486 AYVNYQQPVDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVG----NVFIKNLGKTI 541
Query: 219 TDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWY 278
++ L IF FG I S V D G + +GFV+FQ ++A A++ +NG N + +
Sbjct: 542 DNKALYNIFSTFGNILSCKVACDEKGP-KGYGFVHFQEQESAERAIDVMNGMFLNYRKIF 600
Query: 279 VGRAQKRAEREADLRAKFEQ 298
VGR + EREA+ A Q
Sbjct: 601 VGRFKSHKEREAERGAWARQ 620
>gi|309271474|ref|XP_003085306.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Mus
musculus]
Length = 229
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/169 (58%), Positives = 124/169 (73%), Gaps = 1/169 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL V ES LY+ FS ++S+R+CRD+ R SLGYAYVNY P DA A E
Sbjct: 32 SLYVGDLHPEVTESMLYEKFSPAGPILSIRICRDKVTRRSLGYAYVNYQQPVDAKRALET 91
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF ING+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+AFG +LSCKVA
Sbjct: 92 MNFDVINGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 151
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
D G KGYGFV F+ +E+A+ AI LNGM +N ++++VG F +ER
Sbjct: 152 CDEKG-PKGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFKSHKER 199
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 28/198 (14%)
Query: 203 SPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDA 259
+P F ++YV +L VT+ L + F G I S + +D +S + +VN+Q P
Sbjct: 25 NPDFPTASLYVGDLHPEVTESMLYEKFSPAGPILSIRICRDKVTRRSLGYAYVNYQQPVD 84
Query: 260 AAAAVEKLNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLK 315
A A+E +N N + +W ++R+ LR K N+++K
Sbjct: 85 AKRALETMNFDVINGRPVRIMW--------SQRDPSLR------------KSGVGNVFIK 124
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI 375
NL +I+++ L +FS FG I SCKV D+ G KG GF F E A RA++ +NG +
Sbjct: 125 NLGKTIDNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDALNGMFL 183
Query: 376 GRKPLYVAVAQRKEERKA 393
+ ++V + +ER+A
Sbjct: 184 NYRKIFVGRFKSHKEREA 201
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 6/176 (3%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L + F+ G +LS ++ D +S GY +V ++ A+ A++
Sbjct: 32 SLYVGDLHPEVTESMLYEKFSPAGPILSIRICRDKVTRRSLGYAYVNYQQPVDAKRALET 91
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N +IN + V + R + V NV++ NL +T+ ++ L IF FG I S
Sbjct: 92 MNFDVINGRPVRIMWSQRDPSLRKSGVG----NVFIKNLGKTIDNKALYNIFSAFGNILS 147
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
V D G + +GFV+FQ ++A A++ LNG N + +VGR + EREA+
Sbjct: 148 CKVACDEKG-PKGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFKSHKEREAE 202
>gi|296470851|tpg|DAA12966.1| TPA: PABPC1L2B protein-like [Bos taurus]
Length = 489
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 123/170 (72%), Gaps = 1/170 (0%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDL V E+ LY+ FS ++S+R+CRD+ R SLGYAYVNY P DA A E
Sbjct: 291 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 350
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LNF I G+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+AFG +LSCKV
Sbjct: 351 TLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKV 410
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
A D G KGYGFV F+ +E+A+ AI +NGM +N ++++VG F +ER
Sbjct: 411 ACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKER 459
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 18/197 (9%)
Query: 198 AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQS 256
+++N + ++YV +L VT+ L + F G I S + +D +S + +VN+Q
Sbjct: 282 SERNPNFPMASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQ 341
Query: 257 PDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
P A A+E LN + + +Q R+ LR K N+++KN
Sbjct: 342 PVDAKRALETLNFDVIKGRPVRIMWSQ----RDPSLR------------KSGVGNVFIKN 385
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
L +I+++ L +FS FG I SCKV D+ G KG GF F E A RA++ MNG +
Sbjct: 386 LGKTIDNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLN 444
Query: 377 RKPLYVAVAQRKEERKA 393
+ ++V + +ER+A
Sbjct: 445 YRKIFVGRFKSHKEREA 461
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L + F+ G +LS ++ D +S GY +V ++ A+ A++
Sbjct: 292 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 351
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN +I + V + R + V NV++ NL +T+ ++ L IF FG I S
Sbjct: 352 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----NVFIKNLGKTIDNKALYNIFSAFGNILS 407
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
V D G + +GFV+FQ ++A A++ +NG N + +VGR + EREA+
Sbjct: 408 CKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAE 462
>gi|397508069|ref|XP_003824497.1| PREDICTED: polyadenylate-binding protein 1-like 2-like, partial
[Pan paniscus]
Length = 293
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 124/169 (73%), Gaps = 1/169 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL V E+ LY+ FS ++S+R+CRD+ R SLGYAYVNY P DA A E
Sbjct: 96 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 155
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF I G+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+AFG +LSCKVA
Sbjct: 156 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 215
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
D G KGYGFV F+ +E+A+ AI ++NGM +N ++++VG F +ER
Sbjct: 216 CDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKER 263
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 20/194 (10%)
Query: 203 SPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDA 259
+P F ++YV +L VT+ L + F G I S + +D +S + +VN+Q P
Sbjct: 89 NPDFQMASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVD 148
Query: 260 AAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDD 319
A A+E LN + + +Q R+ LR K N+++KNL
Sbjct: 149 AKRALETLNFDVIKGRPVRIMWSQ----RDPSLR------------KSGVGNVFIKNLGK 192
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
+I+++ L +FS FG I SCKV D+ G KG GF F E A RA++ MNG + +
Sbjct: 193 TIDNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRK 251
Query: 380 LYVAVAQRKEERKA 393
++V + +ER+A
Sbjct: 252 IFVGRFKSHKEREA 265
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L + F+ G +LS ++ D +S GY +V ++ A+ A++
Sbjct: 96 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 155
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN +I + V + R + V NV++ NL +T+ ++ L IF FG I S
Sbjct: 156 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----NVFIKNLGKTIDNKALYNIFSAFGNILS 211
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
V D G + +GFV+FQ ++A A++ +NG N + +VGR + EREA+
Sbjct: 212 CKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAE 266
>gi|431844457|gb|ELK01429.1| Polyadenylate-binding protein 1-like 2 [Pteropus alecto]
Length = 200
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 123/169 (72%), Gaps = 1/169 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL V E+ LY+ FS ++S+R+CRD+ R SLGYAYVNY P DA A E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPMDAKRALET 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF I G+P+RIM+S RDPS+RKSG GNVFIKNL SIDNKAL + F+AFG +LSCKVA
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKSIDNKALYNIFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
D G KGYGFV F+ +E+A+ AI +NGM +N ++++VG F +ER
Sbjct: 123 CDEKG-PKGYGFVHFQKQESAERAINAMNGMFLNYRKIFVGRFKSHKER 170
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 94/191 (49%), Gaps = 26/191 (13%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G I S + +D +S + +VN+Q P A A+E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPMDAKRALET 62
Query: 267 LNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
LN + +W ++R+ LR K N+++KNL SI+
Sbjct: 63 LNFDVIKGRPVRIMW--------SQRDPSLR------------KSGVGNVFIKNLGKSID 102
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
++ L +FS FG I SCKV D+ G KG GF F E A RA+N MNG + + ++V
Sbjct: 103 NKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAINAMNGMFLNYRKIFV 161
Query: 383 AVAQRKEERKA 393
+ +ER+A
Sbjct: 162 GRFKSHKEREA 172
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 6/176 (3%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L + F+ G +LS ++ D +S GY +V ++ A+ A++
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPMDAKRALET 62
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN +I + V + R + V NV++ NL +++ ++ L IF FG I S
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----NVFIKNLGKSIDNKALYNIFSAFGNILS 118
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
V D G + +GFV+FQ ++A A+ +NG N + +VGR + EREA+
Sbjct: 119 CKVACDEKG-PKGYGFVHFQKQESAERAINAMNGMFLNYRKIFVGRFKSHKEREAE 173
>gi|297304162|ref|XP_002806331.1| PREDICTED: polyadenylate-binding protein 1-like 2-like, partial
[Macaca mulatta]
Length = 249
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 124/169 (73%), Gaps = 1/169 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL V E+ LY+ FS ++S+R+CRD+ R SLGYAYVNY P DA A E
Sbjct: 52 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 111
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF I G+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+AFG +LSCKVA
Sbjct: 112 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 171
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
D G KGYGFV F+ +E+A+ AI ++NGM +N ++++VG F +ER
Sbjct: 172 CDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKER 219
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 28/206 (13%)
Query: 203 SPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDA 259
+P F ++YV +L VT+ L + F G I S + +D +S + +VN+Q P
Sbjct: 45 NPDFPMASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVD 104
Query: 260 AAAAVEKLNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLK 315
A A+E LN + +W ++R+ LR K N+++K
Sbjct: 105 AKRALETLNFDVIKGRPVRIMW--------SQRDPSLR------------KSGVGNVFIK 144
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI 375
NL +I+++ L +FS FG I SCKV D+ G KG GF F E A RA++ MNG +
Sbjct: 145 NLGKTIDNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFL 203
Query: 376 GRKPLYVAVAQRKEERKARLQAQFAQ 401
+ ++V + +ER+A A Q
Sbjct: 204 NYRKIFVGRFKSHKEREAERGAWARQ 229
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L + F+ G +LS ++ D +S GY +V ++ A+ A++
Sbjct: 52 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 111
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN +I + V + R + V NV++ NL +T+ ++ L IF FG I S
Sbjct: 112 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----NVFIKNLGKTIDNKALYNIFSAFGNILS 167
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
V D G + +GFV+FQ ++A A++ +NG N + +VGR + EREA+
Sbjct: 168 CKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAE 222
>gi|61175237|ref|NP_001012995.1| polyadenylate-binding protein 1-like 2 [Homo sapiens]
gi|109948285|ref|NP_001035971.1| polyadenylate-binding protein 1-like 2 [Homo sapiens]
gi|402910552|ref|XP_003917938.1| PREDICTED: polyadenylate-binding protein 1-like 2 [Papio anubis]
gi|426396426|ref|XP_004064444.1| PREDICTED: polyadenylate-binding protein 1-like 2 [Gorilla gorilla
gorilla]
gi|74755614|sp|Q5JQF8.1|PAP1M_HUMAN RecName: Full=Polyadenylate-binding protein 1-like 2; AltName:
Full=RNA-binding motif protein 32; AltName:
Full=RNA-binding protein 32
gi|119619077|gb|EAW98671.1| hCG1811470 [Homo sapiens]
gi|187951483|gb|AAI36493.1| PABPC1L2A protein [Homo sapiens]
gi|261861056|dbj|BAI47050.1| poly(A) binding protein, cytoplasmic 1-like 2A [synthetic
construct]
gi|355704922|gb|EHH30847.1| RNA-binding protein 32 [Macaca mulatta]
gi|355767263|gb|EHH62597.1| RNA-binding protein 32 [Macaca fascicularis]
gi|380784435|gb|AFE64093.1| polyadenylate-binding protein 1-like 2 [Macaca mulatta]
Length = 200
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 124/169 (73%), Gaps = 1/169 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL V E+ LY+ FS ++S+R+CRD+ R SLGYAYVNY P DA A E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF I G+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+AFG +LSCKVA
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
D G KGYGFV F+ +E+A+ AI ++NGM +N ++++VG F +ER
Sbjct: 123 CDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKER 170
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 26/191 (13%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G I S + +D +S + +VN+Q P A A+E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 267 LNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
LN + +W ++R+ LR K N+++KNL +I+
Sbjct: 63 LNFDVIKGRPVRIMW--------SQRDPSLR------------KSGVGNVFIKNLGKTID 102
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
++ L +FS FG I SCKV D+ G KG GF F E A RA++ MNG + + ++V
Sbjct: 103 NKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFV 161
Query: 383 AVAQRKEERKA 393
+ +ER+A
Sbjct: 162 GRFKSHKEREA 172
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 91/177 (51%), Gaps = 6/177 (3%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIK 174
++++ +L + L + F+ G +LS ++ D +S GY +V ++ A+ A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 175 MLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTIT 234
LN +I + V + R + V NV++ NL +T+ ++ L IF FG I
Sbjct: 62 TLNFDVIKGRPVRIMWSQRDPSLRKSGVG----NVFIKNLGKTIDNKALYNIFSAFGNIL 117
Query: 235 SAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
S V D G + +GFV+FQ ++A A++ +NG N + +VGR + EREA+
Sbjct: 118 SCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAE 173
>gi|5007080|gb|AAD37807.1| poly(A)-binding protein [Oryza sativa]
Length = 183
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/184 (57%), Positives = 138/184 (75%), Gaps = 3/184 (1%)
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
AV++LNG +DK WYVGRAQK++ RE +L+ KFE+ +K + NLYLKNLDDS++
Sbjct: 2 AVQELNGKKFDDKEWYVGRAQKKSGREMELKEKFEKNLQEAADKYQNTNLYLKNLDDSVD 61
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
D+KL+ELF+E+GTITSCKVM D +G S+GSGF AF E+A+RAL EMN KM+G KPLYV
Sbjct: 62 DDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEMNSKMVGSKPLYV 121
Query: 383 AVAQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMP 441
A+AQRKE+RKARLQAQF+Q+R P ++P + +P + G P +G QQL+YGQ P +
Sbjct: 122 ALAQRKEDRKARLQAQFSQLR-PVPLAPSVGPRMPMFPPGVPGVG-QQLFYGQPPPAFIN 179
Query: 442 PQAA 445
Q A
Sbjct: 180 TQPA 183
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%), Gaps = 12/141 (8%)
Query: 172 AIKMLNGMLINDKQVYVGLFVRRQ----------ERAQQNVSPKF--TNVYVNNLAETVT 219
A++ LNG +DK+ YVG ++ E+ Q + K+ TN+Y+ NL ++V
Sbjct: 2 AVQELNGKKFDDKEWYVGRAQKKSGREMELKEKFEKNLQEAADKYQNTNLYLKNLDDSVD 61
Query: 220 DEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYV 279
D+ L+++F +GTITS VM+DS+G SR GFV F+S + A+ A+ ++N K YV
Sbjct: 62 DDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEMNSKMVGSKPLYV 121
Query: 280 GRAQKRAEREADLRAKFEQER 300
AQ++ +R+A L+A+F Q R
Sbjct: 122 ALAQRKEDRKARLQAQFSQLR 142
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 55/81 (67%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N+++KNLD S+D+ L + FA +GT+ SCKV DSNG S+G GFV F++ E A A+ +
Sbjct: 50 NLYLKNLDDSVDDDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEM 109
Query: 177 NGMLINDKQVYVGLFVRRQER 197
N ++ K +YV L R+++R
Sbjct: 110 NSKMVGSKPLYVALAQRKEDR 130
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y N +LY+ +L+ +V++ +L +LF++ + S +V RD S S G +V + + +DA+
Sbjct: 46 YQNTNLYLKNLDDSVDDDKLRELFAEYGTITSCKVMRD-SNGVSRGSGFVAFKSAEDASR 104
Query: 85 AKEALNFMPINGKPIRIMYSHR 106
A +N + KP+ + + R
Sbjct: 105 ALAEMNSKMVGSKPLYVALAQR 126
>gi|359081870|ref|XP_003588203.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like 2A [Bos
taurus]
gi|395862938|ref|XP_003803673.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Otolemur
garnettii]
Length = 200
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 123/169 (72%), Gaps = 1/169 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL V E+ LY+ FS ++S+R+CRD+ R SLGYAYVNY P DA A E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF I G+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+AFG +LSCKVA
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
D G KGYGFV F+ +E+A+ AI +NGM +N ++++VG F +ER
Sbjct: 123 CDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKER 170
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 26/191 (13%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G I S + +D +S + +VN+Q P A A+E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 267 LNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
LN + +W ++R+ LR K N+++KNL +I+
Sbjct: 63 LNFDVIKGRPVRIMW--------SQRDPSLR------------KSGVGNVFIKNLGKTID 102
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
++ L +FS FG I SCKV D+ G KG GF F E A RA++ MNG + + ++V
Sbjct: 103 NKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFV 161
Query: 383 AVAQRKEERKA 393
+ +ER+A
Sbjct: 162 GRFKSHKEREA 172
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 91/177 (51%), Gaps = 6/177 (3%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIK 174
++++ +L + L + F+ G +LS ++ D +S GY +V ++ A+ A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 175 MLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTIT 234
LN +I + V + R + V NV++ NL +T+ ++ L IF FG I
Sbjct: 62 TLNFDVIKGRPVRIMWSQRDPSLRKSGVG----NVFIKNLGKTIDNKALYNIFSAFGNIL 117
Query: 235 SAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
S V D G + +GFV+FQ ++A A++ +NG N + +VGR + EREA+
Sbjct: 118 SCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAE 173
>gi|291407697|ref|XP_002720156.1| PREDICTED: polyadenylate-binding protein 1-like [Oryctolagus
cuniculus]
gi|301792853|ref|XP_002931393.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Ailuropoda
melanoleuca]
gi|311276495|ref|XP_003135232.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Sus scrofa]
gi|335306198|ref|XP_003360416.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Sus scrofa]
gi|281338845|gb|EFB14429.1| hypothetical protein PANDA_022442 [Ailuropoda melanoleuca]
Length = 200
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 123/169 (72%), Gaps = 1/169 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL V E+ LY+ FS ++S+R+CRD+ R SLGYAYVNY P DA A E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF I G+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+AFG +LSCKVA
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
D G KGYGFV F+ +E+A+ AI +NGM +N ++++VG F +ER
Sbjct: 123 CDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKER 170
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 26/191 (13%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G I S + +D +S + +VN+Q P A A+E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 267 LNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
LN + +W ++R+ LR K N+++KNL +I+
Sbjct: 63 LNFDVIKGRPVRIMW--------SQRDPSLR------------KSGVGNVFIKNLGKTID 102
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
++ L +FS FG I SCKV D+ G KG GF F E A RA++ MNG + + ++V
Sbjct: 103 NKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFV 161
Query: 383 AVAQRKEERKA 393
+ +ER+A
Sbjct: 162 GRFKSHKEREA 172
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 91/177 (51%), Gaps = 6/177 (3%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIK 174
++++ +L + L + F+ G +LS ++ D +S GY +V ++ A+ A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 175 MLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTIT 234
LN +I + V + R + V NV++ NL +T+ ++ L IF FG I
Sbjct: 62 TLNFDVIKGRPVRIMWSQRDPSLRKSGVG----NVFIKNLGKTIDNKALYNIFSAFGNIL 117
Query: 235 SAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
S V D G + +GFV+FQ ++A A++ +NG N + +VGR + EREA+
Sbjct: 118 SCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAE 173
>gi|348570494|ref|XP_003471032.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Cavia
porcellus]
Length = 200
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 123/169 (72%), Gaps = 1/169 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL V E+ LY+ FS ++S+R+CRD+ R SLGYAYVNY P DA A E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF I G+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+AFG +LSCKVA
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
D G KGYGFV F+ +E+A+ AI +NGM +N ++++VG F +ER
Sbjct: 123 CDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKER 170
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 26/191 (13%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G I S + +D +S + +VN+Q P A A+E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 267 LNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
LN + +W ++R+ LR K N+++KNL +I+
Sbjct: 63 LNFDVIKGRPVRIMW--------SQRDPSLR------------KSGVGNVFIKNLGKTID 102
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
++ L +FS FG I SCKV D+ G KG GF F E A RA++ MNG + + ++V
Sbjct: 103 NKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFV 161
Query: 383 AVAQRKEERKA 393
+ +ER+A
Sbjct: 162 GRFKSHKEREA 172
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 91/177 (51%), Gaps = 6/177 (3%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIK 174
++++ +L + L + F+ G +LS ++ D +S GY +V ++ A+ A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 175 MLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTIT 234
LN +I + V + R + V NV++ NL +T+ ++ L IF FG I
Sbjct: 62 TLNFDVIKGRPVRIMWSQRDPSLRKSGVG----NVFIKNLGKTIDNKALYNIFSAFGNIL 117
Query: 235 SAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
S V D G + +GFV+FQ ++A A++ +NG N + +VGR + EREA+
Sbjct: 118 SCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAE 173
>gi|444516866|gb|ELV11302.1| Polyadenylate-binding protein 1-like 2 [Tupaia chinensis]
Length = 200
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 123/169 (72%), Gaps = 1/169 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL V E+ LY+ FS ++S+R+CRD+ R SLGYAYVNY P DA A E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF I G+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+AFG +LSCKVA
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
D G KGYGFV F+ +E+A+ AI +NGM +N ++++VG F +ER
Sbjct: 123 CDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKER 170
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 26/191 (13%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G I S + +D +S + +VN+Q P A A+E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 267 LNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
LN + +W ++R+ LR K N+++KNL +I+
Sbjct: 63 LNFDVIKGRPVRIMW--------SQRDPSLR------------KSGVGNVFIKNLGKTID 102
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
++ L +FS FG I SCKV D+ G KG GF F E A RA++ MNG + + ++V
Sbjct: 103 NKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFV 161
Query: 383 AVAQRKEERKA 393
+ +ER+A
Sbjct: 162 GRFKSHKEREA 172
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 91/177 (51%), Gaps = 6/177 (3%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIK 174
++++ +L + L + F+ G +LS ++ D +S GY +V ++ A+ A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 175 MLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTIT 234
LN +I + V + R + V NV++ NL +T+ ++ L IF FG I
Sbjct: 62 TLNFDVIKGRPVRIMWSQRDPSLRKSGVG----NVFIKNLGKTIDNKALYNIFSAFGNIL 117
Query: 235 SAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
S V D G + +GFV+FQ ++A A++ +NG N + +VGR + EREA+
Sbjct: 118 SCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAE 173
>gi|395863403|ref|XP_003803885.1| PREDICTED: polyadenylate-binding protein 1-like 2-like, partial
[Otolemur garnettii]
Length = 203
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 123/169 (72%), Gaps = 1/169 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL V E+ LY+ FS ++S+R+CRD+ R SLGYAYVNY P DA A E
Sbjct: 6 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 65
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF I G+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+AFG +LSCKVA
Sbjct: 66 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 125
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
D G KGYGFV F+ +E+A+ AI +NGM +N ++++VG F +ER
Sbjct: 126 CDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKER 173
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 26/191 (13%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G I S + +D +S + +VN+Q P A A+E
Sbjct: 6 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 65
Query: 267 LNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
LN + +W ++R+ LR K N+++KNL +I+
Sbjct: 66 LNFDVIKGRPVRIMW--------SQRDPSLR------------KSGVGNVFIKNLGKTID 105
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
++ L +FS FG I SCKV D+ G KG GF F E A RA++ MNG + + ++V
Sbjct: 106 NKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFV 164
Query: 383 AVAQRKEERKA 393
+ +ER+A
Sbjct: 165 GRFKSHKEREA 175
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 91/177 (51%), Gaps = 6/177 (3%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIK 174
++++ +L + L + F+ G +LS ++ D +S GY +V ++ A+ A++
Sbjct: 5 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 64
Query: 175 MLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTIT 234
LN +I + V + R + V NV++ NL +T+ ++ L IF FG I
Sbjct: 65 TLNFDVIKGRPVRIMWSQRDPSLRKSGVG----NVFIKNLGKTIDNKALYNIFSAFGNIL 120
Query: 235 SAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
S V D G + +GFV+FQ ++A A++ +NG N + +VGR + EREA+
Sbjct: 121 SCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAE 176
>gi|426257244|ref|XP_004022242.1| PREDICTED: polyadenylate-binding protein 1-like 2 [Ovis aries]
Length = 200
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 123/169 (72%), Gaps = 1/169 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL V E+ LY+ FS ++S+R+CRD+ R SLGYAYVNY P DA A E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF I G+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+AFG +LSCKVA
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
D G KGYGFV F+ +E+A+ AI +NGM +N ++++VG F +ER
Sbjct: 123 CDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKER 170
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 26/191 (13%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G I S + +D +S + +VN+Q P A A+E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 267 LNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
LN + +W ++R+ LR K N+++KNL +I+
Sbjct: 63 LNFDVIKGRPVRIMW--------SQRDPSLR------------KSGVGNVFIKNLGKTID 102
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
++ L +FS FG I SCKV D+ G KG GF F E A RA++ MNG + + ++V
Sbjct: 103 NKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFV 161
Query: 383 AVAQRKEERKA 393
+ +ER+A
Sbjct: 162 GRFKSHKEREA 172
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 91/177 (51%), Gaps = 6/177 (3%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIK 174
++++ +L + L + F+ G +LS ++ D +S GY +V ++ A+ A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 175 MLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTIT 234
LN +I + V + R + V NV++ NL +T+ ++ L IF FG I
Sbjct: 62 TLNFDVIKGRPVRIMWSQRDPSLRKSGVG----NVFIKNLGKTIDNKALYNIFSAFGNIL 117
Query: 235 SAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
S V D G + +GFV+FQ ++A A++ +NG N + +VGR + EREA+
Sbjct: 118 SCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAE 173
>gi|119923699|ref|XP_599343.3| PREDICTED: poly(A) binding protein, cytoplasmic 1-like 2A [Bos
taurus]
gi|297493007|ref|XP_002700050.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like 2A [Bos
taurus]
gi|358420984|ref|XP_003584787.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like 2A [Bos
taurus]
gi|296470850|tpg|DAA12965.1| TPA: PABPC1L2B protein-like [Bos taurus]
gi|440892195|gb|ELR45496.1| Polyadenylate-binding protein 1-like 2 [Bos grunniens mutus]
Length = 200
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 123/169 (72%), Gaps = 1/169 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL V E+ LY+ FS ++S+R+CRD+ R SLGYAYVNY P DA A E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF I G+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+AFG +LSCKVA
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
D G KGYGFV F+ +E+A+ AI +NGM +N ++++VG F +ER
Sbjct: 123 CDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKER 170
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 26/191 (13%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G I S + +D +S + +VN+Q P A A+E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 267 LNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
LN + +W ++R+ LR K N+++KNL +I+
Sbjct: 63 LNFDVIKGRPVRIMW--------SQRDPSLR------------KSGVGNVFIKNLGKTID 102
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
++ L +FS FG I SCKV D+ G KG GF F E A RA++ MNG + + ++V
Sbjct: 103 NKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFV 161
Query: 383 AVAQRKEERKA 393
+ +ER+A
Sbjct: 162 GRFKSHKEREA 172
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 91/177 (51%), Gaps = 6/177 (3%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIK 174
++++ +L + L + F+ G +LS ++ D +S GY +V ++ A+ A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 175 MLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTIT 234
LN +I + V + R + V NV++ NL +T+ ++ L IF FG I
Sbjct: 62 TLNFDVIKGRPVRIMWSQRDPSLRKSGVG----NVFIKNLGKTIDNKALYNIFSAFGNIL 117
Query: 235 SAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
S V D G + +GFV+FQ ++A A++ +NG N + +VGR + EREA+
Sbjct: 118 SCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAE 173
>gi|351699464|gb|EHB02383.1| Polyadenylate-binding protein 1-like 2 [Heterocephalus glaber]
Length = 200
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 122/169 (72%), Gaps = 1/169 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL V E+ LY+ FS ++S+R+CRD+ R SLGYAYVNY P DA A E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF I G+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+ FG +LSCKVA
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSTFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
D G KGYGFV F+ +E+A+ AI +NGM +N ++++VG F +ER
Sbjct: 123 CDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKER 170
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 26/191 (13%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G I S + +D +S + +VN+Q P A A+E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 267 LNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
LN + +W ++R+ LR K N+++KNL +I+
Sbjct: 63 LNFDVIKGRPVRIMW--------SQRDPSLR------------KSGVGNVFIKNLGKTID 102
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
++ L +FS FG I SCKV D+ G KG GF F E A RA++ MNG + + ++V
Sbjct: 103 NKALYNIFSTFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFV 161
Query: 383 AVAQRKEERKA 393
+ +ER+A
Sbjct: 162 GRFKSHKEREA 172
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L + F+ G +LS ++ D +S GY +V ++ A+ A++
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN +I + V + R + V NV++ NL +T+ ++ L IF FG I S
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----NVFIKNLGKTIDNKALYNIFSTFGNILS 118
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
V D G + +GFV+FQ ++A A++ +NG N + +VGR + EREA+
Sbjct: 119 CKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAE 173
>gi|194228035|ref|XP_001914759.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Equus
caballus]
Length = 200
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 122/169 (72%), Gaps = 1/169 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL V E+ LY+ F ++S+R+CRD+ R SLGYAYVNY P DA A E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFRPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF I G+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+AFG +LSCKVA
Sbjct: 63 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
D G KGYGFV F+ +E+A+ AI +NGM +N ++++VG F +ER
Sbjct: 123 CDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKER 170
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 26/191 (13%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G I S + +D +S + +VN+Q P A A+E
Sbjct: 3 SLYVGDLHPEVTEAMLYEKFRPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62
Query: 267 LNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
LN + +W ++R+ LR K N+++KNL +I+
Sbjct: 63 LNFDVIKGRPVRIMW--------SQRDPSLR------------KSGVGNVFIKNLGKTID 102
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
++ L +FS FG I SCKV D+ G KG GF F E A RA++ MNG + + ++V
Sbjct: 103 NKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFV 161
Query: 383 AVAQRKEERKA 393
+ +ER+A
Sbjct: 162 GRFKSHKEREA 172
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 6/177 (3%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIK 174
++++ +L + L + F G +LS ++ D +S GY +V ++ A+ A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFRPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 175 MLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTIT 234
LN +I + V + R + V NV++ NL +T+ ++ L IF FG I
Sbjct: 62 TLNFDVIKGRPVRIMWSQRDPSLRKSGVG----NVFIKNLGKTIDNKALYNIFSAFGNIL 117
Query: 235 SAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
S V D G + +GFV+FQ ++A A++ +NG N + +VGR + EREA+
Sbjct: 118 SCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAE 173
>gi|27469824|gb|AAH41956.1| PABPC1L2B protein [Homo sapiens]
Length = 243
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 123/169 (72%), Gaps = 1/169 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL V E+ LY+ FS ++S+ +CRD+ R SLGYAYVNY P DA A E
Sbjct: 46 SLYVGDLHPEVTEAMLYEKFSPAGPILSISICRDKITRRSLGYAYVNYQQPVDAKRALET 105
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF I G+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+AFG +LSCKVA
Sbjct: 106 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 165
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
D G KGYGFV F+ +E+A+ AI ++NGM +N ++++VG F +ER
Sbjct: 166 CDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKER 213
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 28/198 (14%)
Query: 203 SPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDA 259
+P F ++YV +L VT+ L + F G I S + +D +S + +VN+Q P
Sbjct: 39 NPDFQMASLYVGDLHPEVTEAMLYEKFSPAGPILSISICRDKITRRSLGYAYVNYQQPVD 98
Query: 260 AAAAVEKLNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLK 315
A A+E LN + +W ++R+ LR K N+++K
Sbjct: 99 AKRALETLNFDVIKGRPVRIMW--------SQRDPSLR------------KSGVGNVFIK 138
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI 375
NL +I+++ L +FS FG I SCKV D+ G KG GF F E A RA++ MNG +
Sbjct: 139 NLGKTIDNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFL 197
Query: 376 GRKPLYVAVAQRKEERKA 393
+ ++V + +ER+A
Sbjct: 198 NYRKIFVGRFKSHKEREA 215
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 6/176 (3%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L + F+ G +LS + D +S GY +V ++ A+ A++
Sbjct: 46 SLYVGDLHPEVTEAMLYEKFSPAGPILSISICRDKITRRSLGYAYVNYQQPVDAKRALET 105
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN +I + V + R + V NV++ NL +T+ ++ L IF FG I S
Sbjct: 106 LNFDVIKGRPVRIMWSQRDPSLRKSGVG----NVFIKNLGKTIDNKALYNIFSAFGNILS 161
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
V D G + +GFV+FQ ++A A++ +NG N + +VGR + EREA+
Sbjct: 162 CKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAE 216
>gi|348677381|gb|EGZ17198.1| hypothetical protein PHYSODRAFT_354553 [Phytophthora sojae]
Length = 317
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 148/214 (69%), Gaps = 14/214 (6%)
Query: 102 MYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGF 160
M+S RDPS+RKSG GN+F+KNLDTSIDNKAL DTF+ FG +LSCKVAID + G SKGYG+
Sbjct: 1 MWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDHTTGASKGYGY 60
Query: 161 VQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTD 220
V +E EAA AI +NGMLI +V+VG F +RQ+R + +TN YV N+ TD
Sbjct: 61 VHYETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDRPDAD---DWTNCYVKNIPTQWTD 117
Query: 221 EDLKKIFGHFGTITSAIVMKDSDG--KSRCFGFVNFQSPDAAAAAVEKLNGTT-----NN 273
DL K F FG + SA+VMKD+ ++R FGFVN++ +AA AV+ LNG +
Sbjct: 118 ADLLKEFEPFGKVLSAVVMKDNANPEQNRGFGFVNYEDSEAAHKAVDALNGKSYPAGEGV 177
Query: 274 DKVWYVGRAQKRAEREADLRAKFEQ---ERISRY 304
+ YVG+AQKR+ERE +LR KFEQ ERI++Y
Sbjct: 178 ETELYVGKAQKRSERERELRNKFEQLKMERINKY 211
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 166/325 (51%), Gaps = 42/325 (12%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH-GFSKGSGFAAFSMPEEATRALN 368
N+++KNLD SI+++ L + FS FG I SCKV +D G SKG G+ + E AT A+
Sbjct: 15 GNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDHTTGASKGYGYVHYETAEAATEAIA 74
Query: 369 EMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQ 428
++NG +I ++V Q++++R A + IP A L
Sbjct: 75 KINGMLIAGTEVFVGHFQKRQDRP----------DADDWTNCYVKNIPTQWTDADLLKEF 124
Query: 429 QLYYGQGTPGLM-----PPQAAGYGF--------QQQVFPGLRPGGPNYIMPYHLQRQVH 475
+ + + +M P Q G+GF + L G +Y ++ +++
Sbjct: 125 EPFGKVLSAVVMKDNANPEQNRGFGFVNYEDSEAAHKAVDAL--NGKSYPAGEGVETELY 182
Query: 476 PG--QRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPA 533
G Q+ R ++ +Q + R + +Y NARN + V +P PA
Sbjct: 183 VGKAQKRSERERELRNKFEQLKMERIN----KYTANARNHPARDVPPQGVMP------PA 232
Query: 534 TPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQ 593
PV+ P P+ ++ALA+ASP+ + M+GE+LYPL+ +P A K+TGMLLEMD
Sbjct: 233 APVQNAGPEPL----TSAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDN 288
Query: 594 TEVLHLIESPEALKTKVAEAMAVLQ 618
E+LHL+ESPEAL+ K++EA+AVL+
Sbjct: 289 GELLHLLESPEALEAKISEALAVLE 313
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 95/186 (51%), Gaps = 10/186 (5%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GN+ +V +L+ +++ LYD FS ++S +V D + +S GY YV+Y + A
Sbjct: 12 SGVGNI--FVKNLDTSIDNKALYDTFSLFGNILSCKVAIDHTTGASKGYGYVHYETAEAA 69
Query: 83 ANAKEALNFMPINGKPIRI-MYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGT 141
A +N M I G + + + R + N ++KN+ T + L F FG
Sbjct: 70 TEAIAKINGMLIAGTEVFVGHFQKRQDRPDADDWTNCYVKNIPTQWTDADLLKEFEPFGK 129
Query: 142 VLSCKVAIDSNG--QSKGYGFVQFENEEAAQNAIKMLNGMLIN-----DKQVYVGLFVRR 194
VLS V D+ Q++G+GFV +E+ EAA A+ LNG + ++YVG +R
Sbjct: 130 VLSAVVMKDNANPEQNRGFGFVNYEDSEAAHKAVDALNGKSYPAGEGVETELYVGKAQKR 189
Query: 195 QERAQQ 200
ER ++
Sbjct: 190 SERERE 195
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 25/205 (12%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-SDGKSRCFGFVNFQSPDAAAAAVEK 266
N++V NL ++ ++ L F FG I S V D + G S+ +G+V++++ +AA A+ K
Sbjct: 16 NIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDHTTGASKGYGYVHYETAEAATEAIAK 75
Query: 267 LNGTTNNDKVWYVGRAQKRAER-EADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
+NG +VG QKR +R +AD N Y+KN+ D
Sbjct: 76 INGMLIAGTEVFVGHFQKRQDRPDAD----------------DWTNCYVKNIPTQWTDAD 119
Query: 326 LKELFSEFGTITSCKVMVDQHG--FSKGSGFAAFSMPEEATRALNEMNGKMIG-----RK 378
L + F FG + S VM D ++G GF + E A +A++ +NGK
Sbjct: 120 LLKEFEPFGKVLSAVVMKDNANPEQNRGFGFVNYEDSEAAHKAVDALNGKSYPAGEGVET 179
Query: 379 PLYVAVAQRKEERKARLQAQFAQIR 403
LYV AQ++ ER+ L+ +F Q++
Sbjct: 180 ELYVGKAQKRSERERELRNKFEQLK 204
>gi|160331003|ref|XP_001712209.1| pab1 [Hemiselmis andersenii]
gi|159765656|gb|ABW97884.1| pab1 [Hemiselmis andersenii]
Length = 502
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/283 (38%), Positives = 175/283 (61%), Gaps = 6/283 (2%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
LYVGDL N+ E + +F + + SV++ RD S +GY +V + N +DA A
Sbjct: 41 CLYVGDLPLNLKEEDIEKIFLTIGPLKSVKIYRDISSGEFMGYCFVEFENFKDAERALTK 100
Query: 89 LN--FMPIN-GKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSC 145
LN F P KP+R+M+ +D + KSG GN+FIKNL D+K+L F FG +LSC
Sbjct: 101 LNYYFDPEKMKKPLRLMWYQKDKFLLKSGGGNIFIKNLPLFFDSKSLEKMFLDFGKILSC 160
Query: 146 KVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK 205
KVA+D NG S GYGFV FE+E+A++ AI+ NG++I +K+++VG F+ R++R ++
Sbjct: 161 KVALDENGTSLGYGFVHFEDEKASKIAIEKTNGLIIGEKKIFVGPFLSRKDRKNFGMTKT 220
Query: 206 -FTNVYVNNLA-ETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAA 263
FTN+Y+ N++ E + +K +F FG ITS + K+++ ++ F FVN++ P+ A A
Sbjct: 221 GFTNIYIKNISPENCNETFIKDLFDIFGKITSIYIPKNNNF-TKGFAFVNYELPEEAEDA 279
Query: 264 VEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK 306
+ ++N + YVG+A+ + ER+ L+ KF +++I EK
Sbjct: 280 IFRMNKKKIKNLTLYVGKAETKIERQRHLQKKFLEKKIGPIEK 322
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 134/274 (48%), Gaps = 27/274 (9%)
Query: 136 FAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRR 194
F G + S K+ D S+G+ GY FV+FEN + A+ A+ LN +K +++
Sbjct: 60 FLTIGPLKSVKIYRDISSGEFMGYCFVEFENFKDAERALTKLNYYFDPEK-------MKK 112
Query: 195 QERAQQNVSPKFT------NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRC 248
R KF N+++ NL + L+K+F FG I S V D +G S
Sbjct: 113 PLRLMWYQKDKFLLKSGGGNIFIKNLPLFFDSKSLEKMFLDFGKILSCKVALDENGTSLG 172
Query: 249 FGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLK 308
+GFV+F+ A+ A+EK NG +K +VG R +R+ K
Sbjct: 173 YGFVHFEDEKASKIAIEKTNGLIIGEKKIFVGPFLSRKDRKN-----------FGMTKTG 221
Query: 309 GANLYLKNLD-DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRAL 367
N+Y+KN+ ++ N+ +K+LF FG ITS + + F+KG F + +PEEA A+
Sbjct: 222 FTNIYIKNISPENCNETFIKDLFDIFGKITSIYI-PKNNNFTKGFAFVNYELPEEAEDAI 280
Query: 368 NEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ 401
MN K I LYV A+ K ER+ LQ +F +
Sbjct: 281 FRMNKKKIKNLTLYVGKAETKIERQRHLQKKFLE 314
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 98/193 (50%), Gaps = 26/193 (13%)
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-SDGKSRCFGFVNFQSPDAAAAAVE 265
T +YV +L + +ED++KIF G + S + +D S G+ + FV F++ A A+
Sbjct: 40 TCLYVGDLPLNLKEEDIEKIFLTIGPLKSVKIYRDISSGEFMGYCFVEFENFKDAERALT 99
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLK------GANLYLKNLDD 319
KLN +Y + + R+ Y+K K G N+++KNL
Sbjct: 100 KLN--------YYFDPEKMKKPL-----------RLMWYQKDKFLLKSGGGNIFIKNLPL 140
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
+ + L+++F +FG I SCKV +D++G S G GF F + + A+ + NG +IG K
Sbjct: 141 FFDSKSLEKMFLDFGKILSCKVALDENGTSLGYGFVHFEDEKASKIAIEKTNGLIIGEKK 200
Query: 380 LYVAVAQRKEERK 392
++V +++RK
Sbjct: 201 IFVGPFLSRKDRK 213
>gi|281340677|gb|EFB16261.1| hypothetical protein PANDA_006204 [Ailuropoda melanoleuca]
Length = 196
Score = 200 bits (509), Expect = 2e-48, Method: Composition-based stats.
Identities = 103/195 (52%), Positives = 131/195 (67%), Gaps = 3/195 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V E L+ FS V V+S+R+CRD R SLGYAYVN+ DA A +
Sbjct: 3 SLYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQKALDT 62
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+NF I GKPIR+M+S RD +RKSG GNVFIKNLD SIDNK L + F+AFG +LS KV
Sbjct: 63 MNFDMIKGKPIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVM 122
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSPKF 206
D G S+GY FV F+N+ AA AI+ +NG L+ D +++VG F R++R QN +F
Sbjct: 123 SDDQG-SRGYAFVHFQNQNAADRAIEEMNGALLKDCRLFVGRFKNRKDREAELQNKVNEF 181
Query: 207 TNVYVNNLAETVTDE 221
TNVYV N + + DE
Sbjct: 182 TNVYVKNFGDDMDDE 196
Score = 98.2 bits (243), Expect = 1e-17, Method: Composition-based stats.
Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 16/210 (7%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIK 174
++++ +L + L F+A G VLS ++ D +S GY +V F AQ A+
Sbjct: 2 ASLYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQKALD 61
Query: 175 MLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTIT 234
+N +I K + + ++ +R +++ NV++ NL +++ ++ L + F FG I
Sbjct: 62 TMNFDMIKGKPIRL-MWSQRDAYLRKS---GIGNVFIKNLDKSIDNKTLYEHFSAFGKIL 117
Query: 235 SAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRA 294
S+ VM D G SR + FV+FQ+ +AA A+E++NG D +VGR + R +REA+L
Sbjct: 118 SSKVMSDDQG-SRGYAFVHFQNQNAADRAIEEMNGALLKDCRLFVGRFKNRKDREAEL-- 174
Query: 295 KFEQERISRYEKLKGANLYLKNLDDSINDE 324
Q +++ + N+Y+KN D ++DE
Sbjct: 175 ---QNKVNEF-----TNVYVKNFGDDMDDE 196
Score = 81.3 bits (199), Expect = 1e-12, Method: Composition-based stats.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 26/194 (13%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-SDGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L+ VT++ L K F G + S + +D +S + +VNF A A++
Sbjct: 3 SLYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQKALDT 62
Query: 267 LNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
+N K +W ++R+A LR K N+++KNLD SI+
Sbjct: 63 MNFDMIKGKPIRLMW--------SQRDAYLR------------KSGIGNVFIKNLDKSID 102
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
++ L E FS FG I S KVM D G S+G F F A RA+ EMNG ++ L+V
Sbjct: 103 NKTLYEHFSAFGKILSSKVMSDDQG-SRGYAFVHFQNQNAADRAIEEMNGALLKDCRLFV 161
Query: 383 AVAQRKEERKARLQ 396
+ +++R+A LQ
Sbjct: 162 GRFKNRKDREAELQ 175
>gi|401827787|ref|XP_003888186.1| polyadenylate-binding protein [Encephalitozoon hellem ATCC 50504]
gi|392999386|gb|AFM99205.1| polyadenylate-binding protein [Encephalitozoon hellem ATCC 50504]
Length = 500
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/376 (32%), Positives = 202/376 (53%), Gaps = 22/376 (5%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
+++YVGDL +S L+ +FS V +++++++ + S+ +A+V + N +DA A
Sbjct: 14 LTIYVGDLPPKTIDSDLFRIFSNVGKILNIKLIK--RGESAPSFAFVTFENEEDAEKAVR 71
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
++ + IR+M P GN+F+KNL S +K L D F+ FG ++SCKV
Sbjct: 72 EYKHYELHDRQIRVMRKDERPP----ETGNIFVKNLPESFTSKDLDDAFSMFGEIVSCKV 127
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIK---MLNGMLINDKQVYVGLFVRRQERAQ-QNVS 203
A G+SKGYGFVQF+ + +A+ IK LNG+++ ++ V L+ ++ + + VS
Sbjct: 128 ATTPQGKSKGYGFVQFKEKRSAKKVIKNFNNLNGLMLGGNKIVVELYNPEMKKGESKKVS 187
Query: 204 PKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAA 263
FTN ++ N +V +++L + +G +TS DGK + F F NF++ ++A A
Sbjct: 188 TMFTNCFIKNFPGSVGEKELLDLLEKYGKVTSLCFPTKDDGKPKGFAFANFETHESALNA 247
Query: 264 VEKLNGTTNND------KVWYVGRAQKRAEREADLRAKFEQERI--SRYEKLKGANLYLK 315
+ L+GT D + +Y+ + QKR ER LR FEQ + Y+K NLY+
Sbjct: 248 INGLHGTFPFDNGKDGGEPFYIQKGQKREERAEVLRKMFEQLSMQGQNYKK----NLYIT 303
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI 375
N+ + E+L +F EFG+ITS V VD K + +S PEEA+ A+ N +
Sbjct: 304 NIPEGFGAEELSNIFKEFGSITSMSVGVDGANNQKQYAYICYSTPEEASIAVERGNEIYL 363
Query: 376 GRKPLYVAVAQRKEER 391
L VA + K ER
Sbjct: 364 DGNRLQVAYFKNKLER 379
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 143/307 (46%), Gaps = 24/307 (7%)
Query: 107 DPSIR-KSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFEN 165
D S R KS +++ +L + L F+ G +L+ K+ I + + FV FEN
Sbjct: 4 DESKRAKSDSLTIYVGDLPPKTIDSDLFRIFSNVGKILNIKL-IKRGESAPSFAFVTFEN 62
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
EE A+ A++ ++D+Q+ V +R+ ER P+ N++V NL E+ T +DL
Sbjct: 63 EEDAEKAVREYKHYELHDRQIRV---MRKDERP-----PETGNIFVKNLPESFTSKDLDD 114
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG I S V GKS+ +GFV F+ +A ++ N N +G +
Sbjct: 115 AFSMFGEIVSCKVATTPQGKSKGYGFVQFKEKRSAKKVIKNFN----NLNGLMLGGNKIV 170
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
E K E +++S N ++KN S+ +++L +L ++G +TS
Sbjct: 171 VELYNPEMKKGESKKVSTM----FTNCFIKNFPGSVGEKELLDLLEKYGKVTSLCFPTKD 226
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKM------IGRKPLYVAVAQRKEERKARLQAQF 399
G KG FA F E A A+N ++G G +P Y+ Q++EER L+ F
Sbjct: 227 DGKPKGFAFANFETHESALNAINGLHGTFPFDNGKDGGEPFYIQKGQKREERAEVLRKMF 286
Query: 400 AQIRAPG 406
Q+ G
Sbjct: 287 EQLSMQG 293
>gi|123408784|ref|XP_001303266.1| Polyadenylate-binding protein [Trichomonas vaginalis G3]
gi|121884631|gb|EAX90336.1| Polyadenylate-binding protein, putative [Trichomonas vaginalis G3]
Length = 461
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/366 (34%), Positives = 204/366 (55%), Gaps = 13/366 (3%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVV-SVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
++VGDL ++++ES L F++ +++ + + + K +A+V ++ + AA A +
Sbjct: 8 IFVGDLPKDIDESFLKQFFAESGEIIPNSGIVLKKHKTLDSSFAFVTFATHEQAAKAMKN 67
Query: 89 LNFMPINGKPIRIMYSHRD-PSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
LN+ ++G+PIRI++ + +I KSG G++FI LD SI+ L D F+ FG ++SCK+
Sbjct: 68 LNYTKLDGRPIRILWCDTETKAIIKSGRGSLFINGLDESIEVSQLHDAFSNFGEIISCKI 127
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
+ ++G+S+GYG++QF N E A+ A L IN K + + + R+ R N FT
Sbjct: 128 PL-TDGKSRGYGYIQFRNPENAEKAKLELADASINGKPIKIDNYNRKSRR---NPDEDFT 183
Query: 208 NVYVNNLA--ETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
NVY+ L + TDEDL+KIF FG I + + KD +G S+ FGF NF+ + A AVE
Sbjct: 184 NVYIKPLPVDQVKTDEDLRKIFEPFGEIQNPSLKKDENGNSKGFGFCNFKLHEDAVKAVE 243
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRY-EKLKGANLYLKNLDDSINDE 324
LNG V R + E+E K E++ ++ E+ G NLY+K+ + D+
Sbjct: 244 GLNGQEMFGVTLQVNRLMSKREKEL-YNIKKHTEKVEKFAEETNGRNLYVKSFSKDVTDK 302
Query: 325 KLKELFSEFGTITSCKV-MVDQHGFSKGSGFAAFSMPEEATRALN-EMNGKMIGRKPLYV 382
+ +E FS+FG I K+ V + SKG GF + E+A A+ M ++ G P YV
Sbjct: 303 EFQEYFSKFGEIELFKIERVPETKESKGFGFVLYKSKEDAQNAIEMAMLERLHGDLP-YV 361
Query: 383 AVAQRK 388
Q K
Sbjct: 362 GFFQTK 367
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 149/294 (50%), Gaps = 26/294 (8%)
Query: 15 SATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYV 74
+ T A + SG G SL++ L++++ SQL+D FS +++S ++ K S GY Y+
Sbjct: 85 TETKAIIKSGRG--SLFINGLDESIEVSQLHDAFSNFGEIISCKIPLTDGK--SRGYGYI 140
Query: 75 NYSNPQDAANAKEALNFMPINGKPIRI----MYSHRDPSIRKSGYGNVFIKNL--DTSID 128
+ NP++A AK L INGKPI+I S R+P + NV+IK L D
Sbjct: 141 QFRNPENAEKAKLELADASINGKPIKIDNYNRKSRRNPD---EDFTNVYIKPLPVDQVKT 197
Query: 129 NKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYV 188
++ L F FG + + + D NG SKG+GF F+ E A A++ LNG + + V
Sbjct: 198 DEDLRKIFEPFGEIQNPSLKKDENGNSKGFGFCNFKLHEDAVKAVEGLNGQEMFGVTLQV 257
Query: 189 GLFVRRQERAQQNVSP------KFT------NVYVNNLAETVTDEDLKKIFGHFGTITSA 236
+ ++E+ N+ KF N+YV + ++ VTD++ ++ F FG I
Sbjct: 258 NRLMSKREKELYNIKKHTEKVEKFAEETNGRNLYVKSFSKDVTDKEFQEYFSKFGEIELF 317
Query: 237 IVMKDSDGK-SRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAERE 289
+ + + K S+ FGFV ++S + A A+E + + YVG Q +A E
Sbjct: 318 KIERVPETKESKGFGFVLYKSKEDAQNAIEMAMLERLHGDLPYVGFFQTKAAHE 371
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 131/279 (46%), Gaps = 23/279 (8%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVL--SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKM 175
+F+ +L ID L FA G ++ S V + FV F E A A+K
Sbjct: 8 IFVGDLPKDIDESFLKQFFAESGEIIPNSGIVLKKHKTLDSSFAFVTFATHEQAAKAMKN 67
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN ++ + + + L+ + +A + ++++N L E++ L F +FG I S
Sbjct: 68 LNYTKLDGRPIRI-LWCDTETKAI--IKSGRGSLFINGLDESIEVSQLHDAFSNFGEIIS 124
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ +DGKSR +G++ F++P+ A A +L + N K + +++ R D
Sbjct: 125 CKIPL-TDGKSRGYGYIQFRNPENAEKAKLELADASINGKPIKIDNYNRKSRRNPD---- 179
Query: 296 FEQERISRYEKLKGANLYLKNL--DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSG 353
E + N+Y+K L D DE L+++F FG I + + D++G SKG G
Sbjct: 180 ---EDFT--------NVYIKPLPVDQVKTDEDLRKIFEPFGEIQNPSLKKDENGNSKGFG 228
Query: 354 FAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERK 392
F F + E+A +A+ +NG+ + L V K E++
Sbjct: 229 FCNFKLHEDAVKAVEGLNGQEMFGVTLQVNRLMSKREKE 267
>gi|326429915|gb|EGD75485.1| poly(A)-binding protein [Salpingoeca sp. ATCC 50818]
Length = 1688
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/370 (35%), Positives = 193/370 (52%), Gaps = 44/370 (11%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL VNE++L++LFS + V+SVRVCRDQ SLGY YVN++ +DA A
Sbjct: 249 SLYVGDLSPQVNETELFNLFSSIGSVMSVRVCRDQITHGSLGYGYVNFNKAEDAEAAMGQ 308
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF ++G+ IRIM RDP R+S N+ + L + L DTF FG +LSCK
Sbjct: 309 LNFHDLHGRHIRIMKVERDPKKRRSDPRNIVVTGLPADTTSVHLRDTFEQFGKILSCKAV 368
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLI-NDKQVYVGLFVRRQERAQQNV--SPK 205
+D +G+ +G+GFV FE+ + A+ AI NG D+++ V F R++R Q+ +
Sbjct: 369 LDHSGRCRGFGFVHFEDPKVAERAIAEANGKDAGGDRKLRVAPFKPRKQREQEQEERTKN 428
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV----MKDSDGKSRCFGFVNFQSPDAAA 261
FTNVYV +L +E+L K+F +G ITS + +KD++ R +GFVNF +AA
Sbjct: 429 FTNVYVKSLRRDADEEELGKLFEPYGDITSKALRTYKLKDTE---RPYGFVNFADTEAAQ 485
Query: 262 AAVEKLNGTTNNDKVWYV-GRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
VE+ G + ++YV G A + ++ D + E+ G+ + +L
Sbjct: 486 KCVEE--GEMHQRDIFYVDGMAFEEGKKVEDF--------VKTVEECAGSEVERHHL--Q 533
Query: 321 INDEKLKE--LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
+ D KL LF E G T K M +PE+ A + I +
Sbjct: 534 VADGKLSGFILFKEHGEETVDKAMT--------------GLPEKMEAATDH-----ISKA 574
Query: 379 PLYVAVAQRK 388
LYV AQ K
Sbjct: 575 KLYVQRAQTK 584
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 191/449 (42%), Gaps = 70/449 (15%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA------ 82
++ V L + L D F Q +++S + D S R G+ +V++ +P+ A
Sbjct: 337 NIVVTGLPADTTSVHLRDTFEQFGKILSCKAVLDHSGRCR-GFGFVHFEDPKVAERAIAE 395
Query: 83 ANAKEA-----LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFA 137
AN K+A L P + R ++ R + NV++K+L D + L F
Sbjct: 396 ANGKDAGGDRKLRVAPFKPRKQR----EQEQEERTKNFTNVYVKSLRRDADEEELGKLFE 451
Query: 138 AFGTVLSCKV-AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
+G + S + + YGFV F + EAAQ V E
Sbjct: 452 PYGDITSKALRTYKLKDTERPYGFVNFADTEAAQKC-------------------VEEGE 492
Query: 197 RAQQNVSPKFTNVYVNNLA--ETVTDEDLKKIFGHF-GTITSAIVMKDSDGKSRCFGFVN 253
Q+++ YV+ +A E ED K G+ ++ +DGK GF+
Sbjct: 493 MHQRDI------FYVDGMAFEEGKKVEDFVKTVEECAGSEVERHHLQVADGK--LSGFIL 544
Query: 254 F-----QSPDAAAAAV-EKLNGTTNN--DKVWYVGRAQKRAEREADLRAKFEQERISRYE 305
F ++ D A + EK+ T++ YV RAQ + ER R + + R
Sbjct: 545 FKEHGEETVDKAMTGLPEKMEAATDHISKAKLYVQRAQTKQERIR--RLRRRLQERRREL 602
Query: 306 KLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATR 365
+ +G NL++KN ++++ +E L++ F E G + KVM D G S+ GF F+ EEA
Sbjct: 603 RQRGGNLFVKNFNENVTEEDLRKFFEECGHVIDVKVMRDMEGVSRCFGFVIFATREEAES 662
Query: 366 ALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ----IRAPGGMSPLASGIPGYHHG 421
A+ + N + + +P+YVA ++ER + Q Q Q + P+ + PGY++
Sbjct: 663 AIAKKNRQTLQDRPIYVAFHLTRQER-CKQQPQHPQQGVYMYPQCPRMPMGAFGPGYYN- 720
Query: 422 APRLGPQQLYYGQGTPGLM--PPQAAGYG 448
PQ + P M P QA G
Sbjct: 721 -----PQMMMVNPQMPRAMNFPAQAGNRG 744
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 549 LTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
+TS LA + R LG+ LY V I+ A K+TGMLL D +++L+ S AL+
Sbjct: 1019 VTSQLAHMDEEQRRGYLGDMLYHRVAGIDKERAPKITGMLLAYDAGHLMNLLASDAALRE 1078
Query: 609 KVAEAMAVL 617
+V A +L
Sbjct: 1079 QVVLAQNIL 1087
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%)
Query: 549 LTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKT 608
+TS LA + R R LG+ L V +I+ A K+TGMLL D +++L+ S AL+
Sbjct: 917 VTSQLAHMDEEQRRRYLGDMLCHRVASIDKERAPKITGMLLAYDAGHLMNLLVSDAALRE 976
Query: 609 KVAEAMAVL 617
+V A +L
Sbjct: 977 QVVLARNIL 985
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 309 GANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ--HGFSKGSGFAAFSMPEEATRA 366
G +LY+ +L +N+ +L LFS G++ S +V DQ HG S G G+ F+ E+A A
Sbjct: 247 GTSLYVGDLSPQVNETELFNLFSSIGSVMSVRVCRDQITHG-SLGYGYVNFNKAEDAEAA 305
Query: 367 LNEMN-GKMIGRKPLYVAVAQRKEERKA 393
+ ++N + GR + V + ++R++
Sbjct: 306 MGQLNFHDLHGRHIRIMKVERDPKKRRS 333
>gi|402585898|gb|EJW79837.1| Poly(A) binding protein [Wuchereria bancrofti]
Length = 175
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/164 (58%), Positives = 116/164 (70%), Gaps = 1/164 (0%)
Query: 11 AAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLG 70
A V +A PS Y SLYVGDL +V E+ L++ FS V+S+RVCRD R SLG
Sbjct: 2 ATVATAGAGMTPS-YPMASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLG 60
Query: 71 YAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNK 130
YAYVN+ P DA A + +NF + GKPIRIM+S RDPS+R+SG GN+FIKNLD SIDNK
Sbjct: 61 YAYVNFQQPADAERALDTMNFDMMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNK 120
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIK 174
A+ DTF+ FG +LSCKVA D SKGYGFV FE EE+AQ AI+
Sbjct: 121 AIYDTFSMFGNILSCKVANDEESNSKGYGFVHFETEESAQKAIE 164
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 17/164 (10%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G + S V +D+ +S + +VNFQ P A A++
Sbjct: 19 SLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALDT 78
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
+N K + +Q R+ +R + N+++KNLD SI+++ +
Sbjct: 79 MNFDMMYGKPIRIMWSQ----RDPSMR------------RSGAGNIFIKNLDKSIDNKAI 122
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEM 370
+ FS FG I SCKV D+ SKG GF F E A +A+ ++
Sbjct: 123 YDTFSMFGNILSCKVANDEESNSKGYGFVHFETEESAQKAIEKV 166
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEEATRALN 368
A+LY+ +L + + L E FS G + S +V D S G + F P +A RAL+
Sbjct: 18 ASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALD 77
Query: 369 EMNGKMIGRKPLYVAVAQR 387
MN M+ KP+ + +QR
Sbjct: 78 TMNFDMMYGKPIRIMWSQR 96
>gi|300707142|ref|XP_002995792.1| hypothetical protein NCER_101231 [Nosema ceranae BRL01]
gi|239605007|gb|EEQ82121.1| hypothetical protein NCER_101231 [Nosema ceranae BRL01]
Length = 508
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 210/388 (54%), Gaps = 36/388 (9%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
++YVGDL ES L+ +FS + +VV +++ + SS +A+V ++N A A +
Sbjct: 13 TIYVGDLSSKTLESDLFRIFSSIGEVVKIKLKKRIEPLSS--FAFVTFANGDAADRAIKE 70
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
N +N K IR++ + S R+ N+ +KNL +S N+ L DTF+ FGT++S K+A
Sbjct: 71 YNNFRLNKKNIRVLPCMDEKSKREDA--NLIVKNLPSSFTNENLYDTFSVFGTIISAKIA 128
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ-------- 200
++G+ K YGFVQF+ +++A+ AIK +G +++K + V +F + + R Q+
Sbjct: 129 TYADGKPKNYGFVQFDKKKSAKMAIKHCDGGKLDNKIIQVEIFDKEKRRKQEEQALENKP 188
Query: 201 -NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV-MKDSDGKSRCFGFVNFQSPD 258
+ PKFTN ++ N E+ T++DL+ + +G ITS +KD S+ F F NF+S +
Sbjct: 189 VKLEPKFTNCFIKNFPESFTEKDLESLLNKYGNITSIYFPLKDGTFVSKGFAFANFESHE 248
Query: 259 AAAAAVEKLNGT----------TNNDKVWYVGRAQKRAEREADLRAKFEQ-----ERISR 303
+A A+++L+G T + +Y+ +AQK+ ERE L+ FEQ + I R
Sbjct: 249 SAQNAIQELHGKQIFPFEENSYTTKLEPFYIQKAQKKEEREEYLKRSFEQLSLEGQNIKR 308
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEA 363
NLY+ N+ I + + E+FSEFG+I S + +D + + +S +EA
Sbjct: 309 -------NLYITNIPAFIEKDDIFEIFSEFGSIVSFSIGIDAVNEQRKYAYVCYSTSDEA 361
Query: 364 TRALNEMNGKMIGRKPLYVAVAQRKEER 391
A+ + N I L V + K ER
Sbjct: 362 FIAIEKGNELFIDNNKLNVTYFKNKAER 389
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 145/305 (47%), Gaps = 25/305 (8%)
Query: 115 YGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIK 174
+ +++ +L + L F++ G V+ K+ S + FV F N +AA AIK
Sbjct: 11 FATIYVGDLSSKTLESDLFRIFSSIGEVVKIKLKKRIEPLS-SFAFVTFANGDAADRAIK 69
Query: 175 MLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTIT 234
N +N K + V + + + + N+ V NL + T+E+L F FGTI
Sbjct: 70 EYNNFRLNKKNIRVLPCMDEKSKRED------ANLIVKNLPSSFTNENLYDTFSVFGTII 123
Query: 235 SAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRA 294
SA + +DGK + +GFV F +A A++ +G ++K+ V K R+ +
Sbjct: 124 SAKIATYADGKPKNYGFVQFDKKKSAKMAIKHCDGGKLDNKIIQVEIFDKEKRRKQE--- 180
Query: 295 KFEQERISRYEKL--KGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGF-SKG 351
EQ ++ KL K N ++KN +S ++ L+ L +++G ITS + F SKG
Sbjct: 181 --EQALENKPVKLEPKFTNCFIKNFPESFTEKDLESLLNKYGNITSIYFPLKDGTFVSKG 238
Query: 352 SGFAAFSMPEEATRALNEMNGKMI----------GRKPLYVAVAQRKEERKARLQAQFAQ 401
FA F E A A+ E++GK I +P Y+ AQ+KEER+ L+ F Q
Sbjct: 239 FAFANFESHESAQNAIQELHGKQIFPFEENSYTTKLEPFYIQKAQKKEEREEYLKRSFEQ 298
Query: 402 IRAPG 406
+ G
Sbjct: 299 LSLEG 303
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 132/303 (43%), Gaps = 45/303 (14%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ +L V +L + LYD FS ++S ++ + Y +V + + A A
Sbjct: 95 DANLIVKNLPSSFTNENLYDTFSVFGTIISAKIATYADGKPK-NYGFVQFDKKKSAKMAI 153
Query: 87 EALNFMPINGKPIRIMYSHRD-------------PSIRKSGYGNVFIKNLDTSIDNKALC 133
+ + ++ K I++ ++ P + + N FIKN S K L
Sbjct: 154 KHCDGGKLDNKIIQVEIFDKEKRRKQEEQALENKPVKLEPKFTNCFIKNFPESFTEKDLE 213
Query: 134 DTFAAFGTVLSCKVAI-DSNGQSKGYGFVQFENEEAAQNAIKMLNGMLI----------N 182
+G + S + D SKG+ F FE+ E+AQNAI+ L+G I
Sbjct: 214 SLLNKYGNITSIYFPLKDGTFVSKGFAFANFESHESAQNAIQELHGKQIFPFEENSYTTK 273
Query: 183 DKQVYVGLFVRRQERAQ-------------QNVSPKFTNVYVNNLAETVTDEDLKKIFGH 229
+ Y+ +++ER + QN+ N+Y+ N+ + +D+ +IF
Sbjct: 274 LEPFYIQKAQKKEEREEYLKRSFEQLSLEGQNIK---RNLYITNIPAFIEKDDIFEIFSE 330
Query: 230 FGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGT-TNNDKV---WYVGRAQKR 285
FG+I S + D+ + R + +V + + D A A+EK N +N+K+ ++ +A++
Sbjct: 331 FGSIVSFSIGIDAVNEQRKYAYVCYSTSDEAFIAIEKGNELFIDNNKLNVTYFKNKAERT 390
Query: 286 AER 288
E+
Sbjct: 391 KEK 393
>gi|123407356|ref|XP_001302991.1| Polyadenylate-binding protein [Trichomonas vaginalis G3]
gi|121884332|gb|EAX90061.1| Polyadenylate-binding protein, putative [Trichomonas vaginalis G3]
Length = 477
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/402 (32%), Positives = 211/402 (52%), Gaps = 22/402 (5%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
++VGDL +V+E+ + ++F S V + K +A+V + + + A A +
Sbjct: 8 VFVGDLPGSVDENFIKEIFKDYGSFPSGTVTVKKHKSLDKSFAFVTFESHELAKRAISEV 67
Query: 90 NFMPINGKPIRIMYSHRDPSIR---KSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
N+ ++G PIRI++S DP + K+ G +FI+ LD +I+ L D F+ FG ++SCK
Sbjct: 68 NYTKLDGVPIRILWS--DPGTKRAIKNNVGALFIRGLDENIEVSQLHDAFSNFGEIVSCK 125
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF 206
+ + +NG+S+GYGF+ F E+ A+ A L IN K + + + Q+ ++N F
Sbjct: 126 IPL-TNGKSRGYGFITFYKEDDAKRAKTDLADASINGKPIQIEFY---QKPTRKNPEETF 181
Query: 207 TNVYVNNLAETV--TDEDLKKIFGHFGTIT-----SAIVMKDSDGKSRCFGFVNFQSPDA 259
TNV++ L + TD+DL F FG + + + DG S FGF NF+ +
Sbjct: 182 TNVFIKPLPADIFKTDDDLANFFKEFGDFVVTGKANPAIKRKEDGSSCEFGFCNFKHHED 241
Query: 260 AAAAVEKLNGTTNND-KVWY-VGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
A AV+ LNG + KV + RAQ +AER+A L + + R E+ +G NLY+KN
Sbjct: 242 AVKAVDALNGKQHESGKVTFSCCRAQTKAERQAFLAKQSAEFRRRLNEETRGRNLYVKNF 301
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVD--QHGFSKGSGFAAFSMPEEATRAL-NEMNGKM 374
D S+ DE+ KE F +FG + C + + + SKG GF F E A AL N + +
Sbjct: 302 DQSVTDEQFKEYFEQFGEVEKCSIRREAQEPHESKGFGFVLFKTKESAQNALENAVITPL 361
Query: 375 IGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIP 416
G+ P Y+ + + KEER+ + + + G M P G P
Sbjct: 362 NGKTP-YIGLFKMKEEREREKASNQRKQQPKGAMIPNTIGGP 402
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 147/298 (49%), Gaps = 30/298 (10%)
Query: 17 TTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNY 76
T A+ + G +L++ L++N+ SQL+D FS ++VS ++ K S GY ++ +
Sbjct: 86 TKRAIKNNVG--ALFIRGLDENIEVSQLHDAFSNFGEIVSCKIPLTNGK--SRGYGFITF 141
Query: 77 SNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIR--KSGYGNVFIKNLDTSI--DNKAL 132
DA AK L INGKPI+I + ++ P+ + + + NVFIK L I + L
Sbjct: 142 YKEDDAKRAKTDLADASINGKPIQIEF-YQKPTRKNPEETFTNVFIKPLPADIFKTDDDL 200
Query: 133 CDTFAAFGT-VLSCK----VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVY 187
+ F FG V++ K + +G S +GF F++ E A A+ LNG +V
Sbjct: 201 ANFFKEFGDFVVTGKANPAIKRKEDGSSCEFGFCNFKHHEDAVKAVDALNGKQHESGKVT 260
Query: 188 VGL-----------FVRRQE---RAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTI 233
F+ +Q R + N + N+YV N ++VTDE K+ F FG +
Sbjct: 261 FSCCRAQTKAERQAFLAKQSAEFRRRLNEETRGRNLYVKNFDQSVTDEQFKEYFEQFGEV 320
Query: 234 TSAIVMKDSD--GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAERE 289
+ +++ +S+ FGFV F++ ++A A+E T N K Y+G + + ERE
Sbjct: 321 EKCSIRREAQEPHESKGFGFVLFKTKESAQNALENAVITPLNGKTPYIGLFKMKEERE 378
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 17/187 (9%)
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV-MKDSDGKSRCFGFVNFQSPDAA 260
+ P + V+V +L +V + +K+IF +G+ S V +K + F FV F+S + A
Sbjct: 1 MDPNWKEVFVGDLPGSVDENFIKEIFKDYGSFPSGTVTVKKHKSLDKSFAFVTFESHELA 60
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
A+ ++N T + +R + R K L+++ LD++
Sbjct: 61 KRAISEVNYTKLDG---------------VPIRILWSDPGTKRAIKNNVGALFIRGLDEN 105
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
I +L + FS FG I SCK+ + +G S+G GF F ++A RA ++ I KP+
Sbjct: 106 IEVSQLHDAFSNFGEIVSCKIPL-TNGKSRGYGFITFYKEDDAKRAKTDLADASINGKPI 164
Query: 381 YVAVAQR 387
+ Q+
Sbjct: 165 QIEFYQK 171
>gi|147835778|emb|CAN72942.1| hypothetical protein VITISV_011270 [Vitis vinifera]
Length = 185
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/119 (75%), Positives = 100/119 (84%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
SLYVGDLE NVN+ QLYDLF+Q+ VVSVRVCRD S R SLGY YVNYSNPQDAA A +
Sbjct: 30 TSLYVGDLELNVNDPQLYDLFNQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALD 89
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
LNF P+NGKP+RIMYSH DPSIRKSG GN+FIKNLD ID+KAL DTF+AFG +LSCK
Sbjct: 90 VLNFTPLNGKPLRIMYSHCDPSIRKSGTGNIFIKNLDKGIDHKALHDTFSAFGNILSCK 148
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-SDGKSRCFGFVNFQSPDAAAAAVE 265
T++YV +L V D L +F G + S V +D S +S +G+VN+ +P AA A++
Sbjct: 30 TSLYVGDLELNVNDPQLYDLFNQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALD 89
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LN T N K LR + S K N+++KNLD I+ +
Sbjct: 90 VLNFTPLNGK---------------PLRIMYSHCDPS-IRKSGTGNIFIKNLDKGIDHKA 133
Query: 326 LKELFSEFGTITSCK 340
L + FS FG I SCK
Sbjct: 134 LHDTFSAFGNILSCK 148
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 8/141 (5%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKML 176
+++ +L+ ++++ L D F G V+S +V D S +S GYG+V + N + A A+ +L
Sbjct: 32 LYVGDLELNVNDPQLYDLFNQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDVL 91
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSA 236
N +N K + + ++ +++ + N+++ NL + + + L F FG I S
Sbjct: 92 NFTPLNGKPLRI-MYSHCDPSIRKSGT---GNIFIKNLDKGIDHKALHDTFSAFGNILSC 147
Query: 237 IVMKDSDGKSRCFGFVNFQSP 257
KD D ++SP
Sbjct: 148 ---KDLDTYQNNMRLHPWESP 165
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 312 LYLKNLDDSINDEKLKELFSEFGTITSCKVMVD-QHGFSKGSGFAAFSMPEEATRALNEM 370
LY+ +L+ ++ND +L +LF++ G + S +V D S G G+ +S P++A RAL+ +
Sbjct: 32 LYVGDLELNVNDPQLYDLFNQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDVL 91
Query: 371 NGKMIGRKPLYVAVAQ 386
N + KPL + +
Sbjct: 92 NFTPLNGKPLRIMYSH 107
>gi|340546029|gb|AEK51813.1| cytoplasmic poly(A) binding protein 1 [Alligator mississippiensis]
gi|402697275|gb|AFQ90825.1| polyA-binding protein cytoplasmic 1, partial [Anniella pulchra]
gi|402697277|gb|AFQ90826.1| polyA-binding protein cytoplasmic 1, partial [Chelydra serpentina]
gi|402697281|gb|AFQ90828.1| polyA-binding protein cytoplasmic 1, partial [Cyrtodactylus sp.
JJF-2012]
gi|402697287|gb|AFQ90831.1| polyA-binding protein cytoplasmic 1, partial [Draco beccarii]
gi|402697289|gb|AFQ90832.1| polyA-binding protein cytoplasmic 1, partial [Draco sumatranus]
Length = 177
Score = 191 bits (484), Expect = 1e-45, Method: Composition-based stats.
Identities = 98/178 (55%), Positives = 127/178 (71%), Gaps = 3/178 (1%)
Query: 121 KNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGML 180
KNLD SIDNKAL DTF+AFG +LSCKV D NG SKGYGFV FE +EAA+ AI+ +NGML
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 181 INDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
+ND++V+VG F R+ER + + +FTNVY+ N E + DE LK++FG FG S V
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKV 119
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKF 296
M D GKS+ FGFV+F+ + A AV+++NG N K YVGRAQK+ ER+ +L+ KF
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKF 177
Score = 143 bits (360), Expect = 3e-31, Method: Composition-based stats.
Identities = 78/187 (41%), Positives = 119/187 (63%), Gaps = 11/187 (5%)
Query: 213 NLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTN 272
NL +++ ++ L F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG
Sbjct: 2 NLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLL 60
Query: 273 NDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSE 332
ND+ +VGR + R EREA+L A+ ++ N+Y+KN + ++DE+LKELF +
Sbjct: 61 NDRKVFVGRFKSRKEREAELGARAKE----------FTNVYIKNFGEDMDDERLKELFGK 110
Query: 333 FGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERK 392
FG S KVM D+ G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+
Sbjct: 111 FGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ 170
Query: 393 ARLQAQF 399
L+ +F
Sbjct: 171 TELKRKF 177
Score = 105 bits (262), Expect = 7e-20, Method: Composition-based stats.
Identities = 62/179 (34%), Positives = 100/179 (55%), Gaps = 9/179 (5%)
Query: 34 DLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMP 93
+L+++++ LYD FS ++S +V D++ S GY +V++ + A A E +N M
Sbjct: 2 NLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAAERAIEKMNGML 59
Query: 94 INGKPIRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
+N + + + R+ + R + NV+IKN +D++ L + F FG LS KV
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKV 119
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF 206
D +G+SKG+GFV FE E AQ A+ +NG +N KQ+YVG ++ ER Q + KF
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVER-QTELKRKF 177
Score = 72.8 bits (177), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLD SI+++ L + FS FG I SCKV+ D++G SKG GF F E A RA+ +MNG +
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 375 IGRKPLYVAVAQRKEERKARLQAQ 398
+ + ++V + ++ER+A L A+
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGAR 83
Score = 43.5 bits (101), Expect = 0.38, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
++Y+ + +++++ +L +LF + +SV+V D+S +S G+ +V++ +DA A +
Sbjct: 89 NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVDE 147
Query: 89 LNFMPINGKPIRI 101
+N +NGK I +
Sbjct: 148 MNGKELNGKQIYV 160
>gi|429966446|gb|ELA48443.1| hypothetical protein VCUG_00052 [Vavraia culicis 'floridensis']
Length = 511
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 205/381 (53%), Gaps = 27/381 (7%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCR---DQSKRSSLGYAYVNYSNPQDAA 83
N ++YVGDL ES LY +FS V ++++++ + D + YAYV +S ++A
Sbjct: 15 NCTVYVGDLSLKAVESDLYKIFSTVGSIITIKLVKPAMDNFPNYTTCYAYVLFSQEEEAL 74
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A LNF ++ K +R+M ++ I+ GN+ IKNL D+K L DTF+ FG +L
Sbjct: 75 EAVNKLNFFKVHDKEMRVMLYDKE-RIKSMDRGNIVIKNLSADCDSKTLHDTFSIFGEIL 133
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS 203
SCKVA++S G+ KG+GFVQF+N+ A+ A+K M ++ + V E+ ++N
Sbjct: 134 SCKVALNSQGKCKGFGFVQFKNKNGARKALKFGTEMQMDGHAIKV-------EKYEKNYK 186
Query: 204 PK-----FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
K FTNV+ N T T++++K IF G ++S DG R FGF N+++
Sbjct: 187 IKTGSRAFTNVFFKNFPLTTTEQEMKDIFMSIGKVSSFYFAAKPDGTLRGFGFANYENAT 246
Query: 259 AAAAAVEKLNGTTNND----KVWYVGRAQKRAEREADLRAKFEQERIS--RYEKLKGANL 312
A A+++L+G + + +YV +AQ + +R L + FE+ +S Y++ NL
Sbjct: 247 DAQRAIDELSGKDVFEGKYPEPFYVQQAQTKQQRLDSLSSAFEKLSMSGLNYKR----NL 302
Query: 313 YLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEEATRALNEMN 371
Y+ L ++ E+++ELFS+FG + S V D K + FS +EA+ A+ + N
Sbjct: 303 YVTRLPNTYGKEEVQELFSQFGKVISVCVGKDNVVNEDKNWAYVCFSTADEASIAVEKGN 362
Query: 372 GKMIGRKPLYVAVAQRKEERK 392
I + + + K ER+
Sbjct: 363 EIYIDSVKINITYFKSKNERE 383
>gi|402697293|gb|AFQ90834.1| polyA-binding protein cytoplasmic 1, partial [Oscaecilia
ochrocephala]
Length = 177
Score = 189 bits (481), Expect = 3e-45, Method: Composition-based stats.
Identities = 97/178 (54%), Positives = 126/178 (70%), Gaps = 3/178 (1%)
Query: 121 KNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGML 180
KNLD SIDNKAL DTF+AFG +LSCKV D NG SKGYGFV FE +EAA+ AI+ +NGML
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVXFETQEAAERAIEKMNGML 59
Query: 181 INDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
+ND++V+VG F R+ER + + +FTNVY+ N E + DE LK++FG +G S V
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEVFGKYGPALSVKV 119
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKF 296
M D GKS+ FGFV+F+ + A AV+ +NG N K YVGRAQK+ ER+ +L+ KF
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVDXMNGKELNGKXIYVGRAQKKVERQTELKRKF 177
Score = 137 bits (346), Expect = 1e-29, Method: Composition-based stats.
Identities = 75/187 (40%), Positives = 117/187 (62%), Gaps = 11/187 (5%)
Query: 213 NLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTN 272
NL +++ ++ L F FG I S V+ D +G S+ +GFV F++ +AA A+EK+NG
Sbjct: 2 NLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVXFETQEAAERAIEKMNGMLL 60
Query: 273 NDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSE 332
ND+ +VGR + R EREA+L A+ ++ N+Y+KN + ++DE+LKE+F +
Sbjct: 61 NDRKVFVGRFKSRKEREAELGARAKE----------FTNVYIKNFGEDMDDERLKEVFGK 110
Query: 333 FGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERK 392
+G S KVM D+ G SKG GF +F E+A +A++ MNGK + K +YV AQ+K ER+
Sbjct: 111 YGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDXMNGKELNGKXIYVGRAQKKVERQ 170
Query: 393 ARLQAQF 399
L+ +F
Sbjct: 171 TELKRKF 177
Score = 102 bits (254), Expect = 6e-19, Method: Composition-based stats.
Identities = 60/179 (33%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 34 DLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMP 93
+L+++++ LYD FS ++S +V D++ S GY +V + + A A E +N M
Sbjct: 2 NLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVXFETQEAAERAIEKMNGML 59
Query: 94 INGKPIRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
+N + + + R+ + R + NV+IKN +D++ L + F +G LS KV
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEVFGKYGPALSVKV 119
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF 206
D +G+SKG+GFV FE E AQ A+ +NG +N K +YVG ++ ER Q + KF
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVDXMNGKELNGKXIYVGRAQKKVER-QTELKRKF 177
Score = 73.2 bits (178), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLD SI+++ L + FS FG I SCKV+ D++G SKG GF F E A RA+ +MNG +
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVXFETQEAAERAIEKMNGML 59
Query: 375 IGRKPLYVAVAQRKEERKARLQAQ 398
+ + ++V + ++ER+A L A+
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGAR 83
Score = 42.0 bits (97), Expect = 1.0, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
++Y+ + +++++ +L ++F + +SV+V D+S +S G+ +V++ +DA A +
Sbjct: 89 NVYIKNFGEDMDDERLKEVFGKYGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVDX 147
Query: 89 LNFMPINGKPIRI 101
+N +NGK I +
Sbjct: 148 MNGKELNGKXIYV 160
>gi|387594015|gb|EIJ89039.1| hypothetical protein NEQG_00858 [Nematocida parisii ERTm3]
gi|387595783|gb|EIJ93406.1| hypothetical protein NEPG_01748 [Nematocida parisii ERTm1]
Length = 512
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 209/376 (55%), Gaps = 22/376 (5%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQ-SKRSSLGYAYVNYSNPQDAANAKE 87
++YVGD+ ES+L+ +FS+V Q+ ++ + R + S YAYV + + A E
Sbjct: 20 TIYVGDIPMATTESELFQIFSKVGQIYTISILRKEVSIVKDKCYAYVTFFDESSVPIAIE 79
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
NF ++G IR+M +++ S+ + GN+ IKNL DN+ L DTF FG +LSCKV
Sbjct: 80 TFNFYSLHGSQIRVMPFNKE-SVVGNREGNIVIKNLPKETDNQTLYDTFIVFGPILSCKV 138
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFV--RRQERAQQNVSPK 205
++ + G G++Q+++ + A+ AI+M+N +++N K++ + ++E+ ++NV+
Sbjct: 139 VKNNLSECTGVGYIQYKDPKVAEVAIQMINKIVLNGKKLCATQCIPNDKREKKRENVAKI 198
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
FTN+YV N +T+E+++ +G +TS + + G+ R F F N+Q+ + AAAA+E
Sbjct: 199 FTNIYVKNFPAGITEEEIEAKLKEYGELTSFLAPRTDSGEMRGFAFANYQTHEMAAAAIE 258
Query: 266 KLN---------GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKN 316
L+ GT N YV RA+ + ER ++ F Q + +E+ + N+Y+ N
Sbjct: 259 ALHDKPFPGYPEGTEN----LYVQRAKLKNERVEEMLEYFSQ--VPEHERRR--NIYITN 310
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
L +N+E + + FS++G I + K+ D ++ G+ + E+A +A+ N
Sbjct: 311 LPGELNEEDVVKYFSKYGPIVTYKLGTDAKN-NRSYGYVFYQKAEDAAKAVELANKSEYC 369
Query: 377 RKPLYVAVAQRKEERK 392
+ L VA + K+ R+
Sbjct: 370 EQTLDVAFFKCKKLRE 385
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 127/292 (43%), Gaps = 22/292 (7%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID--SNGQSKGYGFVQFENEEAAQNAIKM 175
+++ ++ + L F+ G + + + S + K Y +V F +E + AI+
Sbjct: 21 IYVGDIPMATTESELFQIFSKVGQIYTISILRKEVSIVKDKCYAYVTFFDESSVPIAIET 80
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
N ++ Q+ V F + + V + N+ + NL + ++ L F FG I S
Sbjct: 81 FNFYSLHGSQIRVMPFNK-----ESVVGNREGNIVIKNLPKETDNQTLYDTFIVFGPILS 135
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+K++ + G++ ++ P A A++ +N N K + +RE
Sbjct: 136 CKVVKNNLSECTGVGYIQYKDPKVAEVAIQMINKIVLNGKKLCATQCIPNDKREK----- 190
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
++E +++ N+Y+KN I +E+++ E+G +TS G +G FA
Sbjct: 191 -KRENVAKI----FTNIYVKNFPAGITEEEIEAKLKEYGELTSFLAPRTDSGEMRGFAFA 245
Query: 356 AFSMPEEATRALNEMNGKMI-----GRKPLYVAVAQRKEERKARLQAQFAQI 402
+ E A A+ ++ K G + LYV A+ K ER + F+Q+
Sbjct: 246 NYQTHEMAAAAIEALHDKPFPGYPEGTENLYVQRAKLKNERVEEMLEYFSQV 297
>gi|440857933|gb|ELR44433.1| hypothetical protein M91_06292, partial [Bos grunniens mutus]
Length = 149
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/150 (60%), Positives = 110/150 (73%), Gaps = 1/150 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL V E+ LY+ FS ++S+R+CRD+ R SLGYAYVNY P DA A E
Sbjct: 1 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALET 60
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF I G+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+AFG +LSCKVA
Sbjct: 61 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 120
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNG 178
D G KGYGFV F+ +E+A+ AI +NG
Sbjct: 121 CDEKG-PKGYGFVHFQKQESAERAIDAMNG 149
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 26/170 (15%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G I S + +D +S + +VN+Q P A A+E
Sbjct: 1 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALET 60
Query: 267 LNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
LN + +W ++R+ LR K N+++KNL +I+
Sbjct: 61 LNFDVIKGRPVRIMW--------SQRDPSLR------------KSGVGNVFIKNLGKTID 100
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNG 372
++ L +FS FG I SCKV D+ G KG GF F E A RA++ MNG
Sbjct: 101 NKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNG 149
>gi|440493085|gb|ELQ75593.1| Polyadenylate-binding protein (RRM superfamily), partial
[Trachipleistophora hominis]
Length = 513
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 203/381 (53%), Gaps = 27/381 (7%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCR---DQSKRSSLGYAYVNYSNPQDAA 83
N ++YVGDL ES LY +FS V ++++++ + D + YAYV +S ++A
Sbjct: 17 NCTVYVGDLSLKTVESDLYKIFSTVGSIITIKLVKPVMDNFPNYTTCYAYVLFSQEEEAL 76
Query: 84 NAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
A LNF ++ K +R+M ++ I+ GN+ IKNL D+K L DTF+ FG +L
Sbjct: 77 EAVNKLNFFKVHDKEMRVMLYDKE-RIKSMDRGNIVIKNLSADCDSKTLHDTFSIFGEIL 135
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS 203
SCKVA +S G+ KG+GFVQF+N+ A+ A+K M ++ + V E+ ++N
Sbjct: 136 SCKVAQNSQGKCKGFGFVQFKNKNGARKALKFGTEMQMDGHAIKV-------EKYEKNYK 188
Query: 204 PK-----FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPD 258
K FTNV+ N T T++ LK+IF G ++S DG R FGF N+++
Sbjct: 189 IKTGSRAFTNVFFKNFPSTTTEQQLKEIFMSIGKVSSFYFATKPDGGLRGFGFANYENAA 248
Query: 259 AAAAAVEKLNGTTNND----KVWYVGRAQKRAEREADLRAKFEQERIS--RYEKLKGANL 312
A A+++L+G + + +YV +AQ + +R L + FE+ +S Y++ NL
Sbjct: 249 DAQKAIDELSGKDIFEGKYPEPFYVQQAQTKQQRLDSLSSAFEKLSMSGLNYKR----NL 304
Query: 313 YLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEEATRALNEMN 371
Y+ L + E+++ELFS++G I S V D K + FS +EA+ A+ + N
Sbjct: 305 YVTRLPSTYGKEEVEELFSQYGKIISVCVGKDNVVNEDKNWAYVCFSTADEASIAVEKGN 364
Query: 372 GKMIGRKPLYVAVAQRKEERK 392
I + V + K ER+
Sbjct: 365 EVYIDSVKINVTYFKSKNERE 385
>gi|340546031|gb|AEK51814.1| cytoplasmic poly(A) binding protein 1 [Heteronotia binoei]
Length = 177
Score = 188 bits (477), Expect = 8e-45, Method: Composition-based stats.
Identities = 97/178 (54%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 121 KNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGML 180
KNLD SIDNKAL DTF+AFG +LSCKV D NG SKGYGFV FE +EAA+ AI+ +NGML
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 181 INDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
+ND++V+VG F R+ER + + +FTNVY+ N E + DE LK +FG FG S V
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKV 119
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKF 296
M D GKS+ FGFV+F+ + A AV+++NG N K YVGRAQK+ ER+ + + KF
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTEXKRKF 177
Score = 139 bits (351), Expect = 4e-30, Method: Composition-based stats.
Identities = 76/187 (40%), Positives = 118/187 (63%), Gaps = 11/187 (5%)
Query: 213 NLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTN 272
NL +++ ++ L F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG
Sbjct: 2 NLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLL 60
Query: 273 NDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSE 332
ND+ +VGR + R EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +
Sbjct: 61 NDRKVFVGRFKSRKEREAELGARAKE----------FTNVYIKNFGEDMDDERLKDLFGK 110
Query: 333 FGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERK 392
FG S KVM D+ G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+
Sbjct: 111 FGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ 170
Query: 393 ARLQAQF 399
+ +F
Sbjct: 171 TEXKRKF 177
Score = 106 bits (265), Expect = 3e-20, Method: Composition-based stats.
Identities = 60/173 (34%), Positives = 97/173 (56%), Gaps = 8/173 (4%)
Query: 34 DLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMP 93
+L+++++ LYD FS ++S +V D++ S GY +V++ + A A E +N M
Sbjct: 2 NLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAAERAIEKMNGML 59
Query: 94 INGKPIRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
+N + + + R+ + R + NV+IKN +D++ L D F FG LS KV
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKV 119
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
D +G+SKG+GFV FE E AQ A+ +NG +N KQ+YVG ++ ER +
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 172
Score = 72.8 bits (177), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLD SI+++ L + FS FG I SCKV+ D++G SKG GF F E A RA+ +MNG +
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 375 IGRKPLYVAVAQRKEERKARLQAQ 398
+ + ++V + ++ER+A L A+
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGAR 83
Score = 45.1 bits (105), Expect = 0.12, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
++Y+ + +++++ +L DLF + +SV+V D+S +S G+ +V++ +DA A +
Sbjct: 89 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVDE 147
Query: 89 LNFMPINGKPIRI 101
+N +NGK I +
Sbjct: 148 MNGKELNGKQIYV 160
>gi|13365525|dbj|BAB39136.1| poly(A)-binding protein [Carassius auratus]
Length = 154
Score = 187 bits (476), Expect = 1e-44, Method: Composition-based stats.
Identities = 94/153 (61%), Positives = 112/153 (73%), Gaps = 3/153 (1%)
Query: 102 MYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFV 161
M+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LSCKV D NG SKGYGFV
Sbjct: 1 MWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFV 59
Query: 162 QFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER-AQQNVSPK-FTNVYVNNLAETVT 219
FE EAA+ AI+ +NGML+ND++V+VG F R+ER A+ K FTNVY+ N E +
Sbjct: 60 HFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEMGARAKEFTNVYIKNFGEDME 119
Query: 220 DEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFV 252
DE L++IF FG S VM D GKSR FGFV
Sbjct: 120 DEKLREIFSKFGPALSIRVMTDDGGKSRSFGFV 152
Score = 108 bits (269), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/147 (38%), Positives = 91/147 (61%), Gaps = 11/147 (7%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
N+++ NL +++ ++ L F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+
Sbjct: 16 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKM 74
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG ND+ +VGR + R EREA++ A+ ++ N+Y+KN + + DEKL+
Sbjct: 75 NGMLLNDRKVFVGRFKSRKEREAEMGARAKE----------FTNVYIKNFGEDMEDEKLR 124
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGF 354
E+FS+FG S +VM D G S+ GF
Sbjct: 125 EIFSKFGPALSIRVMTDDGGKSRSFGF 151
Score = 78.6 bits (192), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNE 369
N+++KNLD SI+++ L + FS FG I SCKV+ D++G SKG GF F E A RA+ +
Sbjct: 15 GNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEK 73
Query: 370 MNGKMIGRKPLYVAVAQRKEERKARLQAQ 398
MNG ++ + ++V + ++ER+A + A+
Sbjct: 74 MNGMLLNDRKVFVGRFKSRKEREAEMGAR 102
>gi|449329878|gb|AGE96146.1| polyadenylate-binding protein 2 [Encephalitozoon cuniculi]
Length = 502
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/380 (32%), Positives = 203/380 (53%), Gaps = 27/380 (7%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
++++YVG+L +S L+ +FS V +V+SV++ + SS +A+V + N +DA A
Sbjct: 13 SLTIYVGELSPKTLDSDLFRVFSNVGKVLSVKLIKRAEPVSS--FAFVTFENEEDAERAI 70
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
++ + IR+M P GN+F+KNL K L D F+ FG ++SCK
Sbjct: 71 REYKHYELHNRQIRVMKKDERPPET----GNIFVKNLPEDFTGKDLDDAFSMFGEIVSCK 126
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIK---MLNGMLINDKQVYVGLF---VRRQERAQQ 200
VA S+G+SKGYGFVQF+ ++AA+ IK L+G+L+ ++ V L+ +++ E +
Sbjct: 127 VATTSHGKSKGYGFVQFKEKKAAKKVIKNFSSLDGLLLGGNRIVVELYNPEIKKGE--SK 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
S FTN ++ N ++ +L ++ +G +TS +GK + F F NF++ ++A
Sbjct: 185 KTSATFTNCFIKNFPFDASEAELLELLERYGKVTSLFFPVKDNGKPKGFAFANFENHESA 244
Query: 261 AAAVEKLNGT-------TNNDKVWYVGRAQKRAEREADLRAKFEQERI--SRYEKLKGAN 311
A++ L+GT + +Y+ + Q++ ER +LR FEQ + Y+K N
Sbjct: 245 LNAIKNLHGTFPFGAGRDGTGEAFYIQKGQRKEERAEELRKMFEQMSMQGQSYKK----N 300
Query: 312 LYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMN 371
LY+ N+ + E+L +F EFG ITS V VD K + +S PEEA+ A+ N
Sbjct: 301 LYITNIPEGFGCEELGSIFKEFGNITSISVGVDGANSQKQYAYICYSTPEEASIAVERGN 360
Query: 372 GKMIGRKPLYVAVAQRKEER 391
+ L VA + K ER
Sbjct: 361 EIYLDGNRLQVAYFKNKLER 380
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 132/296 (44%), Gaps = 24/296 (8%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLN 177
+++ L + L F+ G VLS K+ I + FV FENEE A+ AI+
Sbjct: 16 IYVGELSPKTLDSDLFRVFSNVGKVLSVKL-IKRAEPVSSFAFVTFENEEDAERAIREYK 74
Query: 178 GMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAI 237
++++Q+ V +++ ER P+ N++V NL E T +DL F FG I S
Sbjct: 75 HYELHNRQIRV---MKKDERP-----PETGNIFVKNLPEDFTGKDLDDAFSMFGEIVSCK 126
Query: 238 VMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
V S GKS+ +GFV F+ AA ++ + +G + E K E
Sbjct: 127 VATTSHGKSKGYGFVQFKEKKAAKKVIKNFSSLDG----LLLGGNRIVVELYNPEIKKGE 182
Query: 298 QERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAF 357
++ S N ++KN ++ +L EL +G +TS V +G KG FA F
Sbjct: 183 SKKTS----ATFTNCFIKNFPFDASEAELLELLERYGKVTSLFFPVKDNGKPKGFAFANF 238
Query: 358 SMPEEATRALNEMNGKM---IGR----KPLYVAVAQRKEERKARLQAQFAQIRAPG 406
E A A+ ++G GR + Y+ QRKEER L+ F Q+ G
Sbjct: 239 ENHESALNAIKNLHGTFPFGAGRDGTGEAFYIQKGQRKEERAEELRKMFEQMSMQG 294
>gi|19074720|ref|NP_586226.1| POLYADENYLATE-BINDING PROTEIN 2 [Encephalitozoon cuniculi GB-M1]
gi|74697505|sp|Q8SR30.1|PABP_ENCCU RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|19069362|emb|CAD25830.1| POLYADENYLATE-BINDING PROTEIN 2 [Encephalitozoon cuniculi GB-M1]
Length = 502
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/380 (32%), Positives = 203/380 (53%), Gaps = 27/380 (7%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
++++YVG+L +S L+ +FS V +V+SV++ + SS +A+V + N +DA A
Sbjct: 13 SLTIYVGELSPKTLDSDLFRVFSNVGKVLSVKLIKRAEPVSS--FAFVTFENEEDAERAI 70
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
++ + IR+M P GN+F+KNL K L D F+ FG ++SCK
Sbjct: 71 REYKHYELHNRQIRVMKKDERPPET----GNIFVKNLPEDFTGKDLDDAFSMFGEIVSCK 126
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIK---MLNGMLINDKQVYVGLF---VRRQERAQQ 200
VA S+G+SKGYGFVQF+ ++AA+ IK L+G+L+ ++ V L+ +++ E +
Sbjct: 127 VATTSHGKSKGYGFVQFKEKKAAKKVIKNFSSLDGLLLGGNRIVVELYNPEIKKGE--SK 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
S FTN ++ N ++ +L ++ +G +TS +GK + F F NF++ ++A
Sbjct: 185 KTSATFTNCFIKNFPFDASEAELLELLERYGKVTSLFFPVKDNGKPKGFAFANFENHESA 244
Query: 261 AAAVEKLNGT-------TNNDKVWYVGRAQKRAEREADLRAKFEQERI--SRYEKLKGAN 311
A++ L+GT + +Y+ + Q++ ER +LR FEQ + Y+K N
Sbjct: 245 LNAIKNLHGTFPFGAGRDGTGEAFYIQKGQRKEERAEELRKMFEQMSMQGQSYKK----N 300
Query: 312 LYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMN 371
LY+ N+ + E+L +F EFG ITS V VD K + +S PEEA+ A+ N
Sbjct: 301 LYITNIPEGFGCEELGSIFKEFGNITSISVGVDGANSQKQYAYICYSTPEEASIAVERGN 360
Query: 372 GKMIGRKPLYVAVAQRKEER 391
+ L VA + K ER
Sbjct: 361 EIYLDGNRLQVAYFKNKLER 380
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 132/296 (44%), Gaps = 24/296 (8%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLN 177
+++ L + L F+ G VLS K+ I + FV FENEE A+ AI+
Sbjct: 16 IYVGELSPKTLDSDLFRVFSNVGKVLSVKL-IKRAEPVSSFAFVTFENEEDAERAIREYK 74
Query: 178 GMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAI 237
++++Q+ V +++ ER P+ N++V NL E T +DL F FG I S
Sbjct: 75 HYELHNRQIRV---MKKDERP-----PETGNIFVKNLPEDFTGKDLDDAFSMFGEIVSCK 126
Query: 238 VMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
V S GKS+ +GFV F+ AA ++ + +G + E K E
Sbjct: 127 VATTSHGKSKGYGFVQFKEKKAAKKVIKNFSSLDG----LLLGGNRIVVELYNPEIKKGE 182
Query: 298 QERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAF 357
++ S N ++KN ++ +L EL +G +TS V +G KG FA F
Sbjct: 183 SKKTS----ATFTNCFIKNFPFDASEAELLELLERYGKVTSLFFPVKDNGKPKGFAFANF 238
Query: 358 SMPEEATRALNEMNGKM---IGR----KPLYVAVAQRKEERKARLQAQFAQIRAPG 406
E A A+ ++G GR + Y+ QRKEER L+ F Q+ G
Sbjct: 239 ENHESALNAIKNLHGTFPFGAGRDGTGEAFYIQKGQRKEERAEELRKMFEQMSMQG 294
>gi|384248056|gb|EIE21541.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 537
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 247/515 (47%), Gaps = 103/515 (20%)
Query: 198 AQQNVSP--KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQ 255
AQ+ V+P + +V+VN L+ V+ E LK++FG G + SA+VM+D G SR FGFVNF
Sbjct: 13 AQEAVNPATESCSVFVNGLSLEVSSETLKEVFGRVGRVASAVVMRDHFGASRGFGFVNFT 72
Query: 256 SPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK-LKGANLYL 314
D A A+++ N + W V +A+KR K EQ+ E+ L NL++
Sbjct: 73 KADEADRAIQQFNKIPHCAGTWLVRKAEKR---------KPEQKAGQVSEQGLDLCNLFI 123
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVD-QHGFSKGSGFAAFSMPEEATRALNEMNGK 373
+ ++ I+ +L+ +F FG + S K++VD + G SK +GF F++PEEA RA++EMNGK
Sbjct: 124 RGVEPEISSIRLQSMFEAFGKVVSSKILVDPKTGASKCAGFLRFTLPEEAARAIHEMNGK 183
Query: 374 MIGRKPLYVAVAQRKEERKAR------LQAQFAQIRAPGGMS---PLASGIPGY---HHG 421
+G K L+V +AQ++ + + AQ P GM+ P++ P Y HG
Sbjct: 184 QVGSKRLFVTLAQKRATTDPQGIIHPPFEQSAAQPSTPTGMAYFMPMSGMAPQYPQGAHG 243
Query: 422 APRLGPQQLYYGQGTPGLMP--PQA--AGYGFQQQ-VFPGLRPGGPNYIMPYHLQRQVHP 476
P P YG PG++P PQA GYG Q V+ G MP + + P
Sbjct: 244 HPAFQP----YGMYPPGMVPIHPQAYQQGYGPPPQLVWQG---------MPMAAFQGMPP 290
Query: 477 GQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNARNGTDQS------------------- 517
G + R+ + Q Q +M S Q Y D A N S
Sbjct: 291 GYQQADPRAISRQQQAQQYYMMTSGQDGTYFDMASNSFMHSGRGYRSHMGRGAATPRGGG 350
Query: 518 --VVSMVPVPFEVS--GMPATPVETP-----RPV--------------PVPISTLTSALA 554
+ P P + G P PV+ P +PV P L + LA
Sbjct: 351 RRGRQLFPEPPASNHLGQPRAPVKVPLTVNSKPVARRDVAPGAAPKDAPTNTKDLVARLA 410
Query: 555 SASPDD--RTRMLGEQLYPLVENIEPVH-ASKVTGMLLEMDQTEVLHLIESPEALKTK-- 609
A+PD R M+G+ L+ LV+ ++P ++K+TGMLLEM + E+LH++E AL K
Sbjct: 411 -ATPDKLVRVSMMGDLLFTLVQGLQPAKDSAKITGMLLEMTEPEILHILEDRAALIKKAR 469
Query: 610 ---------VAEAMAVLQEAA---ARSDVNEKLGS 632
V EA+ VL+ A A+ V ++L S
Sbjct: 470 HPSHSGICSVDEALGVLKAAGYKEAKQQVPKELPS 504
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 19/195 (9%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
+VF+ L + ++ L + F G V S V D G S+G+GFV F + A AI+
Sbjct: 25 SVFVNGLSLEVSSETLKEVFGRVGRVASAVVMRDHFGASRGFGFVNFTKADEADRAIQQF 84
Query: 177 NGMLINDKQVYVGLFVRRQER----------AQQNVSPKFTNVYVNNLAETVTDEDLKKI 226
N + VR+ E+ ++Q + N+++ + ++ L+ +
Sbjct: 85 NKI----PHCAGTWLVRKAEKRKPEQKAGQVSEQGLD--LCNLFIRGVEPEISSIRLQSM 138
Query: 227 FGHFGTITSAIVMKDSD-GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
F FG + S+ ++ D G S+C GF+ F P+ AA A+ ++NG K +V AQKR
Sbjct: 139 FEAFGKVVSSKILVDPKTGASKCAGFLRFTLPEEAARAIHEMNGKQVGSKRLFVTLAQKR 198
Query: 286 A--EREADLRAKFEQ 298
A + + + FEQ
Sbjct: 199 ATTDPQGIIHPPFEQ 213
>gi|340546033|gb|AEK51815.1| cytoplasmic poly(A) binding protein 1 [Ichthyophis bannanicus]
Length = 177
Score = 187 bits (474), Expect = 2e-44, Method: Composition-based stats.
Identities = 95/178 (53%), Positives = 127/178 (71%), Gaps = 3/178 (1%)
Query: 121 KNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGML 180
KNLD SIDNKAL DTF+AFG +LSCKV D NG SKGY FV FE ++AA AI+ +NGML
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGML 59
Query: 181 INDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
+ND++V+VG F R+ER + + +FTNVY+ N + + DE LK++F +G S V
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMDDERLKEMFSKYGKTLSVKV 119
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKF 296
M DS GKS+ FGFV+F+ + A AVE++NG N K+ +VGRAQK+ ER+A+L+ KF
Sbjct: 120 MTDSTGKSKGFGFVSFEKHEDANKAVEEMNGKDVNGKMVFVGRAQKKVERQAELKRKF 177
Score = 142 bits (359), Expect = 4e-31, Method: Composition-based stats.
Identities = 78/187 (41%), Positives = 118/187 (63%), Gaps = 11/187 (5%)
Query: 213 NLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTN 272
NL +++ ++ L F FG I S V+ D +G S+ + FV+F++ DAA A+EK+NG
Sbjct: 2 NLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLL 60
Query: 273 NDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSE 332
ND+ +VGR + R EREA+L A+ ++ N+Y+KN D ++DE+LKE+FS+
Sbjct: 61 NDRKVFVGRFKSRKEREAELGARAKE----------FTNVYIKNFGDDMDDERLKEMFSK 110
Query: 333 FGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERK 392
+G S KVM D G SKG GF +F E+A +A+ EMNGK + K ++V AQ+K ER+
Sbjct: 111 YGKTLSVKVMTDSTGKSKGFGFVSFEKHEDANKAVEEMNGKDVNGKMVFVGRAQKKVERQ 170
Query: 393 ARLQAQF 399
A L+ +F
Sbjct: 171 AELKRKF 177
Score = 102 bits (255), Expect = 4e-19, Method: Composition-based stats.
Identities = 61/179 (34%), Positives = 100/179 (55%), Gaps = 9/179 (5%)
Query: 34 DLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMP 93
+L+++++ LYD FS ++S +V D++ S GYA+V++ A A E +N M
Sbjct: 2 NLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYAFVHFETQDAADRAIEKMNGML 59
Query: 94 INGKPIRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
+N + + + R+ + R + NV+IKN +D++ L + F+ +G LS KV
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMDDERLKEMFSKYGKTLSVKV 119
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF 206
DS G+SKG+GFV FE E A A++ +NG +N K V+VG ++ ER Q + KF
Sbjct: 120 MTDSTGKSKGFGFVSFEKHEDANKAVEEMNGKDVNGKMVFVGRAQKKVER-QAELKRKF 177
Score = 69.3 bits (168), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLD SI+++ L + FS FG I SCKV+ D++G SKG F F + A RA+ +MNG +
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGML 59
Query: 375 IGRKPLYVAVAQRKEERKARLQAQ 398
+ + ++V + ++ER+A L A+
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGAR 83
Score = 42.7 bits (99), Expect = 0.54, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
++Y+ + ++++ +L ++FS+ + +SV+V D + +S G+ +V++ +DA A E
Sbjct: 89 NVYIKNFGDDMDDERLKEMFSKYGKTLSVKVMTDSTGKSK-GFGFVSFEKHEDANKAVEE 147
Query: 89 LNFMPINGKPI 99
+N +NGK +
Sbjct: 148 MNGKDVNGKMV 158
>gi|402697295|gb|AFQ90835.1| polyA-binding protein cytoplasmic 1, partial [Sternotherus minor]
Length = 175
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 121/175 (69%), Gaps = 3/175 (1%)
Query: 121 KNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGML 180
KNLD SJDNKAL D F+AFG +LSCKV D NG SKGYGFV FE +EAA+ AI+ +NGML
Sbjct: 1 KNLDKSJDNKALYDXFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 181 INDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
+ND++V+VG F R+ER + +FTNVY+ N E + DE LK++FG FG S V
Sbjct: 60 LNDRKVFVGRFKSRKEREAXLGARAKEFTNVYIKNFGEDMDDERLKELFGXFGPALSVKV 119
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLR 293
M D GKS+ FGFV+F+ + A AV ++NG N K YV RAQK+ ER+ +L+
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVXEMNGKEXNGKQIYVXRAQKKVERQTELK 174
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 113/184 (61%), Gaps = 11/184 (5%)
Query: 213 NLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTN 272
NL +++ ++ L F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG
Sbjct: 2 NLDKSJDNKALYDXFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLL 60
Query: 273 NDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSE 332
ND+ +VGR + R EREA L A+ ++ N+Y+KN + ++DE+LKELF
Sbjct: 61 NDRKVFVGRFKSRKEREAXLGARAKE----------FTNVYIKNFGEDMDDERLKELFGX 110
Query: 333 FGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERK 392
FG S KVM D+ G SKG GF +F E+A +A+ EMNGK K +YV AQ+K ER+
Sbjct: 111 FGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVXEMNGKEXNGKQIYVXRAQKKVERQ 170
Query: 393 ARLQ 396
L+
Sbjct: 171 TELK 174
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 94/170 (55%), Gaps = 8/170 (4%)
Query: 34 DLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMP 93
+L+++++ LYD FS ++S +V D++ S GY +V++ + A A E +N M
Sbjct: 2 NLDKSJDNKALYDXFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAAERAIEKMNGML 59
Query: 94 INGKPIRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
+N + + + R+ + R + NV+IKN +D++ L + F FG LS KV
Sbjct: 60 LNDRKVFVGRFKSRKEREAXLGARAKEFTNVYIKNFGEDMDDERLKELFGXFGPALSVKV 119
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
D +G+SKG+GFV FE E AQ A+ +NG N KQ+YV ++ ER
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVXEMNGKEXNGKQIYVXRAQKKVER 169
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLD SJ+++ L + FS FG I SCKV+ D++G SKG GF F E A RA+ +MNG +
Sbjct: 1 KNLDKSJDNKALYDXFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 375 IGRKPLYVAVAQRKEERKARLQAQ 398
+ + ++V + ++ER+A L A+
Sbjct: 60 LNDRKVFVGRFKSRKEREAXLGAR 83
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + +++++ +L +LF +SV+V D+S +S G+ +V++ +DA A
Sbjct: 88 TNVYIKNFGEDMDDERLKELFGXFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVX 146
Query: 88 ALNFMPINGKPIRIMYSHR 106
+N NGK I + + +
Sbjct: 147 EMNGKEXNGKQIYVXRAQK 165
>gi|326531316|dbj|BAK05009.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/392 (32%), Positives = 198/392 (50%), Gaps = 30/392 (7%)
Query: 254 FQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLY 313
FQ P + L + + + G++ K+AER+ L+ E++R K G+N+Y
Sbjct: 1 FQKPRKCQESKRGLEWDRSGSENFVRGKSSKKAERKQYLQLLHEEKRNEIITKSNGSNVY 60
Query: 314 LKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGK 373
+KN+ D ++D+ L+E F+EFG ITS K+M D G SKG GF +S P+EA A++ M G
Sbjct: 61 IKNISDEVDDDTLRERFAEFGNITSVKIMRDDKGISKGFGFVCYSTPDEAKCAVSSMRGV 120
Query: 374 MIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGM-SP-LASGIPGYHHGAPRLG-PQQL 430
M KPLYVA+AQRKE+RKARL+ +FA++ G SP + +G P + P PQ
Sbjct: 121 MFYGKPLYVAIAQRKEDRKARLEQRFAELATMAGTASPVIPTGYPHVYFAHPSTHFPQ-- 178
Query: 431 YYGQGTPGLM-PPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTH 489
G G M PP G ++Q V+P P+ +Q Q+H R +
Sbjct: 179 --GPSRQGFMYPPIGLGQEWRQNVYPS----------PHSIQ-QIHAPLMPNTPRQYRNN 225
Query: 490 QMQQPQFMRNSNQGIRYLDNARNGTDQSVVS--------MVPVPFEVSGMPATPVETPRP 541
+ + M + Y+ + + D +S +P +G+ + P
Sbjct: 226 RGRMTGNMMTFPHAVNYVSHPQAAKDFMSMSRQQFGHAKYIPPDVVSNGL---AIHHSGP 282
Query: 542 VPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIE 601
+ + S LA+A PD + MLG ++YPLVE P ASK+TGMLLE+D + +L ++
Sbjct: 283 ISSVNDSFASLLAAAPPDQQRDMLGNRIYPLVERYHPDLASKITGMLLELDTSYLLSMLN 342
Query: 602 SPEALKTKVAEAMAVLQEAAARSDVNEKLGSL 633
S + L KV E + LQ + + E L +L
Sbjct: 343 SQDTLAAKVNECVQALQGQQSTKNKPEDLEAL 374
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%)
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
+NVY+ N+++ V D+ L++ F FG ITS +M+D G S+ FGFV + +PD A AV
Sbjct: 57 SNVYIKNISDEVDDDTLRERFAEFGNITSVKIMRDDKGISKGFGFVCYSTPDEAKCAVSS 116
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+ G K YV AQ++ +R+A L +F +
Sbjct: 117 MRGVMFYGKPLYVAIAQRKEDRKARLEQRFAE 148
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%)
Query: 106 RDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFEN 165
R+ I KS NV+IKN+ +D+ L + FA FG + S K+ D G SKG+GFV +
Sbjct: 47 RNEIITKSNGSNVYIKNISDEVDDDTLRERFAEFGNITSVKIMRDDKGISKGFGFVCYST 106
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
+ A+ A+ + G++ K +YV + R+++R
Sbjct: 107 PDEAKCAVSSMRGVMFYGKPLYVAIAQRKEDR 138
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
++Y+ ++ V++ L + F++ + SV++ RD K S G+ +V YS P +A A +
Sbjct: 58 NVYIKNISDEVDDDTLRERFAEFGNITSVKIMRD-DKGISKGFGFVCYSTPDEAKCAVSS 116
Query: 89 LNFMPINGKPIRIMYSHR 106
+ + GKP+ + + R
Sbjct: 117 MRGVMFYGKPLYVAIAQR 134
>gi|402697297|gb|AFQ90836.1| polyA-binding protein cytoplasmic 1, partial [Testudo hermanni]
Length = 176
Score = 185 bits (470), Expect = 6e-44, Method: Composition-based stats.
Identities = 96/177 (54%), Positives = 124/177 (70%), Gaps = 3/177 (1%)
Query: 121 KNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGML 180
KNLD SIDNKAL D F+AFG +LSCKV D NG SKGYGFV FE +EAA+ AI+ +NGML
Sbjct: 1 KNLDKSIDNKALYDXFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 181 INDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
+ND++V+VG F R+ER + + +FTNVY+ N E + DE LK++FG FG S V
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGXFGPALSVKV 119
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
M D GKS+ FGFV+F+ + A AV ++NG N K YVGRAQK+ ER+ +L+ K
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVXEMNGKELNGKQIYVGRAQKKVERQTELKRK 176
Score = 139 bits (349), Expect = 7e-30, Method: Composition-based stats.
Identities = 77/184 (41%), Positives = 115/184 (62%), Gaps = 11/184 (5%)
Query: 213 NLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTN 272
NL +++ ++ L F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG
Sbjct: 2 NLDKSIDNKALYDXFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLL 60
Query: 273 NDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSE 332
ND+ +VGR + R EREA+L A+ ++ N+Y+KN + ++DE+LKELF
Sbjct: 61 NDRKVFVGRFKSRKEREAELGARAKE----------FTNVYIKNFGEDMDDERLKELFGX 110
Query: 333 FGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERK 392
FG S KVM D+ G SKG GF +F E+A +A+ EMNGK + K +YV AQ+K ER+
Sbjct: 111 FGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVXEMNGKELNGKQIYVGRAQKKVERQ 170
Query: 393 ARLQ 396
L+
Sbjct: 171 TELK 174
Score = 105 bits (261), Expect = 1e-19, Method: Composition-based stats.
Identities = 59/173 (34%), Positives = 97/173 (56%), Gaps = 8/173 (4%)
Query: 34 DLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMP 93
+L+++++ LYD FS ++S +V D++ S GY +V++ + A A E +N M
Sbjct: 2 NLDKSIDNKALYDXFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAAERAIEKMNGML 59
Query: 94 INGKPIRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
+N + + + R+ + R + NV+IKN +D++ L + F FG LS KV
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGXFGPALSVKV 119
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
D +G+SKG+GFV FE E AQ A+ +NG +N KQ+YVG ++ ER +
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVXEMNGKELNGKQIYVGRAQKKVERQTE 172
Score = 72.4 bits (176), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLD SI+++ L + FS FG I SCKV+ D++G SKG GF F E A RA+ +MNG +
Sbjct: 1 KNLDKSIDNKALYDXFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 375 IGRKPLYVAVAQRKEERKARLQAQ 398
+ + ++V + ++ER+A L A+
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGAR 83
Score = 42.0 bits (97), Expect = 1.1, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
++Y+ + +++++ +L +LF +SV+V D+S +S G+ +V++ +DA A
Sbjct: 89 NVYIKNFGEDMDDERLKELFGXFGPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVXE 147
Query: 89 LNFMPINGKPIRI 101
+N +NGK I +
Sbjct: 148 MNGKELNGKQIYV 160
>gi|50545625|ref|XP_500351.1| YALI0B00616p [Yarrowia lipolytica]
gi|49646217|emb|CAG82565.1| YALI0B00616p [Yarrowia lipolytica CLIB122]
Length = 589
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 162/615 (26%), Positives = 274/615 (44%), Gaps = 81/615 (13%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+S+YV +L +V+E+ L++LF + +++ RD R+ LG+AYV + NP A A
Sbjct: 18 TMSIYVANLPGSVSEADLFELFKPHGPLKVIKIPRDPKLRTPLGHAYVTFYNPDHADAAL 77
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYG-------------NVFIKNLDTSIDNKALC 133
AL + G+ + + PS S VF+++ +D
Sbjct: 78 GALKETELGGQQVTCALTEEVPSSASSMSTPPSSAHSPIDPARAVFVRDTRDGVDAATTK 137
Query: 134 DTFAAFGTVLSCKVAIDSNGQSKG-YGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFV 192
+ G V + Q KG FV A+ A K+L+ L N + V
Sbjct: 138 TALESLGAV---------SLQPKGPNAFVAVF--PTAEEASKVLSDELANLEISPV---- 182
Query: 193 RRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFV 252
++ FTN++V L+ T+E L+ F FG +TS ++ D +++ FGFV
Sbjct: 183 -------RDPKTHFTNLFVRGLSRETTEEALRAEFERFGAVTSLLLPLDESHRAKGFGFV 235
Query: 253 NFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANL 312
NF+ A AV L+G V RAQ + ER+A+L+ +E RI R +G NL
Sbjct: 236 NFEEHRDAVTAVAALDGAELCGARISVSRAQSKVERQAELKRAYEANRIERLRNARGTNL 295
Query: 313 YLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNG 372
Y+ NL+ +IN+E+L+ FS+FG ITS ++M+D G SKG GF F P+ A+ A+ EM+
Sbjct: 296 YITNLNPAINNERLRAYFSKFGEITSVRIMLDAVGNSKGFGFVCFRDPDHASNAIAEMHN 355
Query: 373 KMIGRKPLYVAVAQRKEERKA--RLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQL 430
+ I L VA+A +K+ + A L +F + GG P+ G H
Sbjct: 356 RPIEGNVLQVAIAHKKDPQSAPYSLGKRFPP--SVGGAVPVV----GMH----------- 398
Query: 431 YYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQ 490
G PG MP +A P + P+ + P+ +Q + + HQ
Sbjct: 399 ---GGIPGGMPMHSA---------PNMHHVPPHLVPPHLMQSHMVQSHMMPMGPMVPMHQ 446
Query: 491 MQQPQFMRNSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLT 550
M R+ + N + + + P + +P+ P +
Sbjct: 447 MGPVMMRRDGGGNPVNPGGSTNIGNSTNSTNSSNPGKFKKR--------QPMLQPYGNIA 498
Query: 551 SALASASPDDRTR-MLGEQLYPLVENIEPV-----HASKVTGMLLEMDQTEVLHLIESPE 604
+++A+A+ + ++GE LYP+V+ + + VTG++L+ D ++L +E +
Sbjct: 499 ASVAAAATPQAAKEIVGETLYPIVQRHPAIGKDADTTAHVTGIMLQHDNADILSWLEDEQ 558
Query: 605 ALKTKVAEAMAVLQE 619
L ++ +A +E
Sbjct: 559 LLNKRIQQASDAYRE 573
>gi|426228299|ref|XP_004008250.1| PREDICTED: polyadenylate-binding protein 1-like [Ovis aries]
Length = 551
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 148/446 (33%), Positives = 215/446 (48%), Gaps = 96/446 (21%)
Query: 228 GHFGTITSAIVMKDSD-----GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRA 282
GH + V K+ D S+ +GFV+F++ +AA A+EK+NG ND+ +VGR
Sbjct: 68 GHARIVGQNWVQKEIDLPNKKNGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRF 127
Query: 283 QKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVM 342
+ R EREA+L A+ ++ N+Y+KN + ++DE+LK+LF +FG S KVM
Sbjct: 128 KSRKEREAELGARAKE----------FTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVM 177
Query: 343 VDQHGFSKGSGFAAF------------------------SMPEEATRALNEMNGKMIGRK 378
D+ G SKG GF +F S PEEAT+A+ EMNG+++ K
Sbjct: 178 TDESGKSKGFGFVSFERHEDAQKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 237
Query: 379 PLYVAVAQRKEERKARLQAQFAQ----IRA-------------PGGMSPLASGIPGYHHG 421
PLYVA+AQRKEER+A L Q+ Q +RA P G + IP +
Sbjct: 238 PLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGY--FMAAIPQTQNR 295
Query: 422 APRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPG-LRPGGPNYIMPYHLQRQVH---PG 477
A P Q+ + +P A + FQ PG +RP P P+ R P
Sbjct: 296 AAYYPPSQIAQLRPSPRWTAQGARPHPFQN--MPGAIRPAAPR--PPFSTMRPASSQVPR 351
Query: 478 QRTGVRRSGNTHQMQQPQ----------FMRNSNQGIRYLDNARNGTD----QSVVSMVP 523
+ R + + Q P+ +R Q +Y RN Q V+M
Sbjct: 352 VMSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQ-YKYAAGVRNPQQHLNAQPQVTM-- 408
Query: 524 VPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASK 583
PA V+ P+ S LASA P ++ +MLGE L+PL++ + P A K
Sbjct: 409 ------QQPAVHVQGQEPL------TASMLASAPPQEQKQMLGEGLFPLIQAMHPTLAGK 456
Query: 584 VTGMLLEMDQTEVLHLIESPEALKTK 609
+TGMLLE+D E LH++E PE+L++K
Sbjct: 457 ITGMLLEIDNLE-LHMLEPPESLRSK 481
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 98/174 (56%), Gaps = 26/174 (14%)
Query: 155 SKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVN 212
SKGYGFV FE +EAA+ AI+ +NGML+ND++V+VG F R+ER + + +FTNVY+
Sbjct: 91 SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIK 150
Query: 213 NLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQ----------------- 255
N E + DE LK +FG FG S VM D GKS+ FGFV+F+
Sbjct: 151 NFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKVMMEGGRSKG 210
Query: 256 -------SPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
SP+ A AV ++NG K YV AQ++ ER+A L ++ Q S
Sbjct: 211 FGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMAS 264
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 35/181 (19%)
Query: 65 KRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRI----MYSHRDPSI--RKSGYGNV 118
K S GY +V++ + A A E +N M +N + + + R+ + R + NV
Sbjct: 88 KNGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNV 147
Query: 119 FIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQ-------- 170
+IKN +D++ L D F FG LS KV D +G+SKG+GFV FE E AQ
Sbjct: 148 YIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKVMMEGGR 207
Query: 171 ----------------NAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNL 214
A+ +NG ++ K +YV L R++ER TN Y+ +
Sbjct: 208 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAH-----LTNQYMQRM 262
Query: 215 A 215
A
Sbjct: 263 A 263
>gi|405963265|gb|EKC28854.1| Polyadenylate-binding protein 1 [Crassostrea gigas]
Length = 172
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 89/158 (56%), Positives = 113/158 (71%), Gaps = 1/158 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL +V E LY+ FS V+S+RVCR R SLGYAYV++ + +DA A
Sbjct: 16 SLYVGDLHPDVTEDMLYEKFSTAGPVLSIRVCRVLFTRRSLGYAYVDFKHLEDAETALNT 75
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+N+ I G+PIRI + RDPS RKSG GNVFIKNLD SIDNKAL DTF+AFG +LSCK+
Sbjct: 76 MNYDTIKGQPIRITWYQRDPSPRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKIV 135
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQV 186
D +G +GYGFV FE EE+A AI+ +NG +++ K+V
Sbjct: 136 CDEHG-FRGYGFVHFEKEESATIAIERVNGTMLHGKKV 172
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 27/178 (15%)
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-SDGKSRCFGFVNFQSPDAAAAAVE 265
T++YV +L VT++ L + F G + S V + +S + +V+F+ + A A+
Sbjct: 15 TSLYVGDLHPDVTEDMLYEKFSTAGPVLSIRVCRVLFTRRSLGYAYVDFKHLEDAETALN 74
Query: 266 KLNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
+N T + WY +R+ R K N+++KNLD SI
Sbjct: 75 TMNYDTIKGQPIRITWY--------QRDPSPR------------KSGVGNVFIKNLDKSI 114
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI-GRK 378
+++ L + FS FG I SCK++ D+HGF +G GF F E AT A+ +NG M+ G+K
Sbjct: 115 DNKALYDTFSAFGNILSCKIVCDEHGF-RGYGFVHFEKEESATIAIERVNGTMLHGKK 171
>gi|289740845|gb|ADD19170.1| polyadenylate-binding protein [Glossina morsitans morsitans]
Length = 321
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 132/185 (71%), Gaps = 1/185 (0%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKM 175
G ++IKNL+ SIDNKA+ DTF+AFG +L+C VA D +G S+GYGFVQF++EEAA+ AI+
Sbjct: 128 GKIYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEHGNSRGYGFVQFDSEEAARAAIEK 187
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+NG+L N ++V+V ++ R++R Q+ + +F N+YV N E +++++K++F +G ITS
Sbjct: 188 VNGILCNSQKVHVVKYIPRRDREQEKAT-QFRNLYVKNFNEDFSEQNMKEMFEPYGRITS 246
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+M D +G+S+ FGFV F++P +A AAV LNG DK YV RA + ER+ ++ K
Sbjct: 247 HKIMTDEEGRSKRFGFVAFENPQSALAAVIALNGKQLGDKYLYVARALSKIERQQEINRK 306
Query: 296 FEQER 300
E+ +
Sbjct: 307 LEERK 311
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 109/192 (56%), Gaps = 13/192 (6%)
Query: 204 PKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAA 263
P +Y+ NL ++ ++ + F FG I + V KD G SR +GFV F S +AA AA
Sbjct: 125 PDSGKIYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEHGNSRGYGFVQFDSEEAARAA 184
Query: 264 VEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIND 323
+EK+NG N + +V + R +RE QE+ +++ NLY+KN ++ ++
Sbjct: 185 IEKVNGILCNSQKVHVVKYIPRRDRE--------QEKATQFR-----NLYVKNFNEDFSE 231
Query: 324 EKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVA 383
+ +KE+F +G ITS K+M D+ G SK GF AF P+ A A+ +NGK +G K LYVA
Sbjct: 232 QNMKEMFEPYGRITSHKIMTDEEGRSKRFGFVAFENPQSALAAVIALNGKQLGDKYLYVA 291
Query: 384 VAQRKEERKARL 395
A K ER+ +
Sbjct: 292 RALSKIERQQEI 303
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 96/174 (55%), Gaps = 4/174 (2%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
+Y+ +LE++++ +YD FS +++ V +D+ +S GY +V + + + A A E +
Sbjct: 130 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEHG-NSRGYGFVQFDSEEAARAAIEKV 188
Query: 90 NFMPINGKPIRIM--YSHRDPSIRK-SGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
N + N + + ++ RD K + + N+++KN + + + + F +G + S K
Sbjct: 189 NGILCNSQKVHVVKYIPRRDREQEKATQFRNLYVKNFNEDFSEQNMKEMFEPYGRITSHK 248
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
+ D G+SK +GFV FEN ++A A+ LNG + DK +YV + + ER Q+
Sbjct: 249 IMTDEEGRSKRFGFVAFENPQSALAAVIALNGKQLGDKYLYVARALSKIERQQE 302
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%)
Query: 312 LYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMN 371
+Y+KNL+ SI+++ + + FS FG I +C V D+HG S+G GF F E A A+ ++N
Sbjct: 130 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEHGNSRGYGFVQFDSEEAARAAIEKVN 189
Query: 372 GKMIGRKPLYVAVAQRKEERKARLQAQFAQI 402
G + + ++V + +R+ QF +
Sbjct: 190 GILCNSQKVHVVKYIPRRDREQEKATQFRNL 220
>gi|402697291|gb|AFQ90833.1| polyA-binding protein cytoplasmic 1, partial [Malaclemys terrapin]
Length = 175
Score = 181 bits (459), Expect = 1e-42, Method: Composition-based stats.
Identities = 94/175 (53%), Positives = 123/175 (70%), Gaps = 3/175 (1%)
Query: 121 KNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGML 180
KNLD SIDNKAL DTF+AFG +LSCKV D NG SKGYGFV FE +EAA+ AI+ +NGML
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 181 INDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
+ND++V+VG F R+ER + + +FTNVY+ N E + DE LK++FG S V
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGXXXPALSVKV 119
Query: 239 MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLR 293
M D GKS+ FGFV+F+ + A AV+++NG N K YVGRAQK+ ER+ +L+
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELK 174
Score = 134 bits (336), Expect = 2e-28, Method: Composition-based stats.
Identities = 75/184 (40%), Positives = 114/184 (61%), Gaps = 11/184 (5%)
Query: 213 NLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTN 272
NL +++ ++ L F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+NG
Sbjct: 2 NLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLL 60
Query: 273 NDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSE 332
ND+ +VGR + R EREA+L A+ ++ N+Y+KN + ++DE+LKELF
Sbjct: 61 NDRKVFVGRFKSRKEREAELGARAKE----------FTNVYIKNFGEDMDDERLKELFGX 110
Query: 333 FGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERK 392
S KVM D+ G SKG GF +F E+A +A++EMNGK + K +YV AQ+K ER+
Sbjct: 111 XXPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQ 170
Query: 393 ARLQ 396
L+
Sbjct: 171 TELK 174
Score = 99.0 bits (245), Expect = 6e-18, Method: Composition-based stats.
Identities = 57/173 (32%), Positives = 95/173 (54%), Gaps = 8/173 (4%)
Query: 34 DLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMP 93
+L+++++ LYD FS ++S +V D++ S GY +V++ + A A E +N M
Sbjct: 2 NLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAAERAIEKMNGML 59
Query: 94 INGKPIRI----MYSHRDPSI--RKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
+N + + + R+ + R + NV+IKN +D++ L + F LS KV
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGXXXPALSVKV 119
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
D +G+SKG+GFV FE E AQ A+ +NG +N KQ+YVG ++ ER +
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 172
Score = 72.4 bits (176), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 315 KNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM 374
KNLD SI+++ L + FS FG I SCKV+ D++G SKG GF F E A RA+ +MNG +
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 375 IGRKPLYVAVAQRKEERKARLQAQ 398
+ + ++V + ++ER+A L A+
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGAR 83
Score = 42.0 bits (97), Expect = 0.88, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
++Y+ + +++++ +L +LF +SV+V D+S +S G+ +V++ +DA A +
Sbjct: 89 NVYIKNFGEDMDDERLKELFGXXXPALSVKVMTDESGKSK-GFGFVSFERHEDAQKAVDE 147
Query: 89 LNFMPINGKPIRI 101
+N +NGK I +
Sbjct: 148 MNGKELNGKQIYV 160
>gi|296235783|ref|XP_002763047.1| PREDICTED: uncharacterized protein LOC100399785, partial
[Callithrix jacchus]
Length = 445
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 100/136 (73%), Gaps = 1/136 (0%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVGDL V E+ LY+ FS ++S+R+CRD+ R SLGYAYVNY P DA A E
Sbjct: 311 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 370
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LNF I G+P+RIM+S RDPS+RKSG GNVFIKNL +IDNKAL + F+AFG +LSCKVA
Sbjct: 371 LNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 430
Query: 149 IDSNGQSKGYGFVQFE 164
D G KGYGFV F+
Sbjct: 431 CDEKG-PKGYGFVHFQ 445
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 18/151 (11%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G I S + +D +S + +VN+Q P A A+E
Sbjct: 311 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 370
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
LN + + +Q R+ LR K N+++KNL +I+++ L
Sbjct: 371 LNFDVIKGRPVRIMWSQ----RDPSLR------------KSGVGNVFIKNLGKTIDNKAL 414
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAF 357
+FS FG I SCKV D+ G KG GF F
Sbjct: 415 YNIFSAFGNILSCKVACDEKG-PKGYGFVHF 444
>gi|13365527|dbj|BAB39137.1| poly(A)-binding protein [Carassius auratus]
Length = 154
Score = 179 bits (455), Expect = 3e-42, Method: Composition-based stats.
Identities = 88/153 (57%), Positives = 108/153 (70%), Gaps = 3/153 (1%)
Query: 102 MYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFV 161
M+S RDP +RKSG GN+FIKN+D SIDNKAL DT +AFG +LSCKV D NG SKGYGFV
Sbjct: 1 MWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTSSAFGNILSCKVVCDENG-SKGYGFV 59
Query: 162 QFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVT 219
FE +EAA AI+ +NGML+ND++V+VG F R+ER + + +FTNVY+ N +E +
Sbjct: 60 HFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKERMAEMGAKAMEFTNVYIKNFSEDID 119
Query: 220 DEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFV 252
E LK IF FG S VM D G SR FGFV
Sbjct: 120 REKLKSIFSEFGKTLSVCVMTDESGCSRGFGFV 152
Score = 102 bits (255), Expect = 4e-19, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 87/147 (59%), Gaps = 11/147 (7%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
N+++ N+ E++ ++ L FG I S V+ D +G S+ +GFV+F++ +AA A+E +
Sbjct: 16 NIFIKNMDESIDNKALYDTSSAFGNILSCKVVCDENG-SKGYGFVHFETQEAANRAIETM 74
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG ND+ +VG + R ER A++ AK ++ N+Y+KN + I+ EKLK
Sbjct: 75 NGMLLNDRKVFVGHFKSRKERMAEMGAK----------AMEFTNVYIKNFSEDIDREKLK 124
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGF 354
+FSEFG S VM D+ G S+G GF
Sbjct: 125 SIFSEFGKTLSVCVMTDESGCSRGFGF 151
Score = 74.7 bits (182), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNE 369
N+++KN+D+SI+++ L + S FG I SCKV+ D++G SKG GF F E A RA+
Sbjct: 15 GNIFIKNMDESIDNKALYDTSSAFGNILSCKVVCDENG-SKGYGFVHFETQEAANRAIET 73
Query: 370 MNGKMIGRKPLYVAVAQRKEERKARLQAQ 398
MNG ++ + ++V + ++ER A + A+
Sbjct: 74 MNGMLLNDRKVFVGHFKSRKERMAEMGAK 102
>gi|195121744|ref|XP_002005379.1| GI19109 [Drosophila mojavensis]
gi|193910447|gb|EDW09314.1| GI19109 [Drosophila mojavensis]
Length = 300
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 132/184 (71%), Gaps = 2/184 (1%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLN 177
++IKNL+ SIDNKA+ DTF+AFG +L+C VA D +G S+GYGFV F++EEAA+ AI+ +N
Sbjct: 108 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 167
Query: 178 GMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAI 237
GML N+++V+V F+ R++R Q+ + F N+YV NL+E T++ L+++F +G ITS
Sbjct: 168 GMLCNNQKVHVVKFIPRRDREQEKAT-HFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 226
Query: 238 VMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNND-KVWYVGRAQKRAEREADLRAKF 296
+M D +G+SR FGFV F+SP +A AAV L+G D K YV RA +AER+ ++ K
Sbjct: 227 LMLDEEGRSRRFGFVAFESPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKL 286
Query: 297 EQER 300
E+ +
Sbjct: 287 EERK 290
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 111/188 (59%), Gaps = 14/188 (7%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
+Y+ NL ++ ++ + F FG I + V KD DG SR +GFV+F S +AA AA+EK+N
Sbjct: 108 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 167
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G N++ +V + R +R EQE+ + ++ NLY+KNL + ++ L+E
Sbjct: 168 GMLCNNQKVHVVKFIPRRDR--------EQEKATHFK-----NLYVKNLSEEFTEQHLRE 214
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG-RKPLYVAVAQR 387
+F +G ITS K+M+D+ G S+ GF AF P+ A A+ ++GK +G K LYVA A
Sbjct: 215 MFEPYGRITSHKLMLDEEGRSRRFGFVAFESPQSALAAVIGLHGKQLGDNKFLYVARALS 274
Query: 388 KEERKARL 395
K ER+ +
Sbjct: 275 KAERQQEI 282
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 98/175 (56%), Gaps = 5/175 (2%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
+Y+ +LE++++ +YD FS +++ V +D+ +S GY +V++ + + A A E +
Sbjct: 108 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEDG-NSRGYGFVHFDSEEAARAAIEKV 166
Query: 90 NFMPINGKPIRIM--YSHRDPSIRK-SGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
N M N + + ++ RD K + + N+++KNL + L + F +G + S K
Sbjct: 167 NGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 226
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND-KQVYVGLFVRRQERAQQ 200
+ +D G+S+ +GFV FE+ ++A A+ L+G + D K +YV + + ER Q+
Sbjct: 227 LMLDEEGRSRRFGFVAFESPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQE 281
>gi|125811664|ref|XP_001361971.1| GA18301 [Drosophila pseudoobscura pseudoobscura]
gi|195171077|ref|XP_002026337.1| GL20391 [Drosophila persimilis]
gi|54637147|gb|EAL26550.1| GA18301 [Drosophila pseudoobscura pseudoobscura]
gi|194111239|gb|EDW33282.1| GL20391 [Drosophila persimilis]
Length = 296
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 88/186 (47%), Positives = 132/186 (70%), Gaps = 2/186 (1%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKM 175
G ++IKNL+ SIDNKA+ DTF+ FG +L+C VA D +G S+GYGFV F++EEAA+ AI+
Sbjct: 102 GKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEK 161
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+NGML N+++V+V F+ R++R Q+ + F N+YV NL+E T++ L+++F +G ITS
Sbjct: 162 VNGMLCNNQKVHVVKFIPRRDREQEKAT-HFKNLYVKNLSEEFTEQHLREMFEPYGRITS 220
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNND-KVWYVGRAQKRAEREADLRA 294
+M D +G+SR FGFV F++P +A AAV L+G D K YV RA +AER+ ++
Sbjct: 221 HKLMLDEEGRSRRFGFVAFENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINR 280
Query: 295 KFEQER 300
K E+ +
Sbjct: 281 KLEERK 286
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 112/193 (58%), Gaps = 14/193 (7%)
Query: 204 PKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAA 263
P +Y+ NL ++ ++ + F FG I + V KD DG SR +GFV+F S +AA AA
Sbjct: 99 PDSGKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAA 158
Query: 264 VEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIND 323
+EK+NG N++ +V + R +R EQE+ + ++ NLY+KNL + +
Sbjct: 159 IEKVNGMLCNNQKVHVVKFIPRRDR--------EQEKATHFK-----NLYVKNLSEEFTE 205
Query: 324 EKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG-RKPLYV 382
+ L+E+F +G ITS K+M+D+ G S+ GF AF P+ A A+ ++GK +G K LYV
Sbjct: 206 QHLREMFEPYGRITSHKLMLDEEGRSRRFGFVAFENPQSALAAVIGLHGKQLGDNKFLYV 265
Query: 383 AVAQRKEERKARL 395
A A K ER+ +
Sbjct: 266 ARALSKAERQQEI 278
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 98/175 (56%), Gaps = 5/175 (2%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
+Y+ +LE++++ +YD FS +++ V +D+ +S GY +V++ + + A A E +
Sbjct: 104 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDG-NSRGYGFVHFDSEEAARAAIEKV 162
Query: 90 NFMPINGKPIRIM--YSHRDPSIRK-SGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
N M N + + ++ RD K + + N+++KNL + L + F +G + S K
Sbjct: 163 NGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 222
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND-KQVYVGLFVRRQERAQQ 200
+ +D G+S+ +GFV FEN ++A A+ L+G + D K +YV + + ER Q+
Sbjct: 223 LMLDEEGRSRRFGFVAFENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQE 277
>gi|195429621|ref|XP_002062856.1| GK19472 [Drosophila willistoni]
gi|194158941|gb|EDW73842.1| GK19472 [Drosophila willistoni]
Length = 297
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 131/184 (71%), Gaps = 2/184 (1%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLN 177
++IKNL+ SIDNKA+ DTF+ FG +L+C VA D +G S+GYGFV F++EEAA+ AI+ +N
Sbjct: 105 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 164
Query: 178 GMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAI 237
GML N+++V+V F+ R++R Q+ + F N+YV NL+E T++ L+++F +G ITS
Sbjct: 165 GMLCNNQKVHVVKFIPRRDREQEKAT-HFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 223
Query: 238 VMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNND-KVWYVGRAQKRAEREADLRAKF 296
+M D +G+SR FGFV F+SP +A AAV L+G D K YV RA +AER+ ++ K
Sbjct: 224 LMLDEEGRSRKFGFVAFESPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKL 283
Query: 297 EQER 300
E+ +
Sbjct: 284 EERK 287
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 111/188 (59%), Gaps = 14/188 (7%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
+Y+ NL ++ ++ + F FG I + V KD DG SR +GFV+F S +AA AA+EK+N
Sbjct: 105 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 164
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G N++ +V + R +R EQE+ + ++ NLY+KNL + ++ L+E
Sbjct: 165 GMLCNNQKVHVVKFIPRRDR--------EQEKATHFK-----NLYVKNLSEEFTEQHLRE 211
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG-RKPLYVAVAQR 387
+F +G ITS K+M+D+ G S+ GF AF P+ A A+ ++GK +G K LYVA A
Sbjct: 212 MFEPYGRITSHKLMLDEEGRSRKFGFVAFESPQSALAAVIGLHGKQLGDNKFLYVARALS 271
Query: 388 KEERKARL 395
K ER+ +
Sbjct: 272 KAERQQEI 279
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 98/175 (56%), Gaps = 5/175 (2%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
+Y+ +LE++++ +YD FS +++ V +D+ +S GY +V++ + + A A E +
Sbjct: 105 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDG-NSRGYGFVHFDSEEAARAAIEKV 163
Query: 90 NFMPINGKPIRIM--YSHRDPSIRK-SGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
N M N + + ++ RD K + + N+++KNL + L + F +G + S K
Sbjct: 164 NGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 223
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND-KQVYVGLFVRRQERAQQ 200
+ +D G+S+ +GFV FE+ ++A A+ L+G + D K +YV + + ER Q+
Sbjct: 224 LMLDEEGRSRKFGFVAFESPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQE 278
>gi|123445099|ref|XP_001311313.1| Polyadenylate-binding protein [Trichomonas vaginalis G3]
gi|121893117|gb|EAX98383.1| Polyadenylate-binding protein, putative [Trichomonas vaginalis G3]
Length = 419
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 126/375 (33%), Positives = 191/375 (50%), Gaps = 15/375 (4%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
L+VGDL V+ + + +LF + S + + K +A+V + + + A A +
Sbjct: 8 LFVGDLPGYVDGNFIKELFREYGNFPSGTITVKKHKSLDKSFAFVTFESHELARRALLEV 67
Query: 90 NFMPINGKPIRIMYSHRDPSIR---KSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
N+ ++G PIRI++S DP+ + K + + I +LD I+ L D F+ FG V+SCK
Sbjct: 68 NYTKLDGVPIRILWS--DPATKRAIKKDFCTLIIFDLDEYIEAAQLHDIFSNFGEVVSCK 125
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF 206
+ + +NG+ +G G+V F EE A L IN K + + L+ + ++N F
Sbjct: 126 IPL-TNGKPRGDGYVTFYKEEDAMRVKNDLAQASINGKPIQIVLYCKP---TRKNSEETF 181
Query: 207 TNVYVNNLAETV--TDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
TNV++ L T+EDL K+ FG + + + DG S FGF NF A AV
Sbjct: 182 TNVFIKPLLVKYFKTNEDLAKLMKDFGEFVNPSIKFNDDGTSSEFGFCNFMYHQDAVKAV 241
Query: 265 EKLNGTTN--NDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
E LNG + + + RAQ +AER+A L + + R YE+ +G NLY+KN+D SIN
Sbjct: 242 ESLNGKMHISGEFEFVCCRAQTKAERQAFLAEQSAEFRRRLYEETRGRNLYIKNIDRSIN 301
Query: 323 DEKLKELFSEFGTITSCKVMVDQH--GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
DE+ +E F +FG + C + + SKG GF F E A AL + K L
Sbjct: 302 DEEFEEYFKQFGEVEKCLISREAQEPHESKGFGFVLFKTKEGAQNALKNTIITPLKGKIL 361
Query: 381 YVAVAQRKEERKARL 395
YV KEER+ L
Sbjct: 362 YVNYFIMKEEREHIL 376
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 141/298 (47%), Gaps = 27/298 (9%)
Query: 16 ATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVN 75
AT A+ + +L + DL++ + +QL+D+FS +VVS ++ K G YV
Sbjct: 85 ATKRAIKKDF--CTLIIFDLDEYIEAAQLHDIFSNFGEVVSCKIPLTNGK--PRGDGYVT 140
Query: 76 YSNPQDAANAKEALNFMPINGKPIRI-MYSHRDPSIRKSGYGNVFIKNLDTSI--DNKAL 132
+ +DA K L INGKPI+I +Y + + NVFIK L N+ L
Sbjct: 141 FYKEEDAMRVKNDLAQASINGKPIQIVLYCKPTRKNSEETFTNVFIKPLLVKYFKTNEDL 200
Query: 133 CDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNG-MLINDKQVYVGLF 191
FG ++ + + +G S +GF F + A A++ LNG M I+ + +V
Sbjct: 201 AKLMKDFGEFVNPSIKFNDDGTSSEFGFCNFMYHQDAVKAVESLNGKMHISGEFEFVC-- 258
Query: 192 VRRQERAQQNV-----SPKF----------TNVYVNNLAETVTDEDLKKIFGHFGTITSA 236
R Q +A++ S +F N+Y+ N+ ++ DE+ ++ F FG +
Sbjct: 259 CRAQTKAERQAFLAEQSAEFRRRLYEETRGRNLYIKNIDRSINDEEFEEYFKQFGEVEKC 318
Query: 237 IVMKDSD--GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADL 292
++ +++ +S+ FGFV F++ + A A++ T K+ YV + ERE L
Sbjct: 319 LISREAQEPHESKGFGFVLFKTKEGAQNALKNTIITPLKGKILYVNYFIMKEEREHIL 376
>gi|194757405|ref|XP_001960955.1| GF11244 [Drosophila ananassae]
gi|190622253|gb|EDV37777.1| GF11244 [Drosophila ananassae]
Length = 307
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 136/201 (67%), Gaps = 7/201 (3%)
Query: 101 IMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGF 160
I+ S+ P RK ++IKNL+ SIDNKA+ DTF+ FG +L+C VA D +G S+GYGF
Sbjct: 103 IINSNSTPDSRK-----IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGF 157
Query: 161 VQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTD 220
V F+ EEAA+ AI+ +NGML N+++V+V F+ R++R Q+ + F N+YV NL E T+
Sbjct: 158 VHFDTEEAARAAIEKVNGMLCNNQKVHVVKFIPRRDREQEKAT-HFKNLYVKNLGEEFTE 216
Query: 221 EDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNND-KVWYV 279
+ L+++F +G ITS +M D +G+SR FGFV +++P +A AAV L+G D K YV
Sbjct: 217 QHLREMFEPYGRITSHKLMLDDEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYV 276
Query: 280 GRAQKRAEREADLRAKFEQER 300
RA +AER+ ++ K E+ +
Sbjct: 277 ARALSKAERQQEINRKLEERK 297
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 115/202 (56%), Gaps = 14/202 (6%)
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
N +P +Y+ NL ++ ++ + F FG I + V KD DG SR +GFV+F + +AA
Sbjct: 107 NSTPDSRKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDTEEAA 166
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
AA+EK+NG N++ +V + R +RE QE+ + ++ NLY+KNL +
Sbjct: 167 RAAIEKVNGMLCNNQKVHVVKFIPRRDRE--------QEKATHFK-----NLYVKNLGEE 213
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG-RKP 379
++ L+E+F +G ITS K+M+D G S+ GF A+ P+ A A+ ++GK +G K
Sbjct: 214 FTEQHLREMFEPYGRITSHKLMLDDEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKF 273
Query: 380 LYVAVAQRKEERKARLQAQFAQ 401
LYVA A K ER+ + + +
Sbjct: 274 LYVARALSKAERQQEINRKLEE 295
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 97/175 (55%), Gaps = 5/175 (2%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
+Y+ +LE++++ +YD FS +++ V +D+ +S GY +V++ + A A E +
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDG-NSRGYGFVHFDTEEAARAAIEKV 173
Query: 90 NFMPINGKPIRIM--YSHRDPSIRK-SGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
N M N + + ++ RD K + + N+++KNL + L + F +G + S K
Sbjct: 174 NGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLGEEFTEQHLREMFEPYGRITSHK 233
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND-KQVYVGLFVRRQERAQQ 200
+ +D G+S+ +GFV +EN ++A A+ L+G + D K +YV + + ER Q+
Sbjct: 234 LMLDDEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQE 288
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%)
Query: 312 LYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMN 371
+Y+KNL+ SI+++ + + FS FG I +C V D+ G S+G GF F E A A+ ++N
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDTEEAARAAIEKVN 174
Query: 372 GKMIGRKPLYVAVAQRKEERKARLQAQFAQI 402
G + + ++V + +R+ F +
Sbjct: 175 GMLCNNQKVHVVKFIPRRDREQEKATHFKNL 205
>gi|194886456|ref|XP_001976617.1| GG19920 [Drosophila erecta]
gi|190659804|gb|EDV57017.1| GG19920 [Drosophila erecta]
Length = 307
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 131/184 (71%), Gaps = 2/184 (1%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLN 177
++IKNL+ SIDNKA+ DTF+ FG +L+C VA D +G S+GYGFV F++EEAA+ AI+ +N
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 178 GMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAI 237
GML N+++V+V F+ R++R Q+ + F N+YV NL+E T++ L+++F +G ITS
Sbjct: 175 GMLCNNQKVHVVKFIPRRDREQEKAT-HFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 233
Query: 238 VMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNND-KVWYVGRAQKRAEREADLRAKF 296
+M D +G+SR FGFV +++P +A AAV L+G D K YV RA +AER+ ++ K
Sbjct: 234 LMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKL 293
Query: 297 EQER 300
E+ +
Sbjct: 294 EERK 297
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 113/194 (58%), Gaps = 14/194 (7%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
+Y+ NL ++ ++ + F FG I + V KD DG SR +GFV+F S +AA AA+EK+N
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G N++ +V + R +R EQE+ + ++ NLY+KNL + ++ L+E
Sbjct: 175 GMLCNNQKVHVVKFIPRRDR--------EQEKATHFK-----NLYVKNLSEEFTEQHLRE 221
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG-RKPLYVAVAQR 387
+F +G ITS K+M+D+ G S+ GF A+ P+ A A+ ++GK +G K LYVA A
Sbjct: 222 MFEPYGRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALS 281
Query: 388 KEERKARLQAQFAQ 401
K ER+ + + +
Sbjct: 282 KAERQQEINRKLEE 295
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 98/175 (56%), Gaps = 5/175 (2%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
+Y+ +LE++++ +YD FS +++ V +D+ +S GY +V++ + + A A E +
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDG-NSRGYGFVHFDSEEAARAAIEKV 173
Query: 90 NFMPINGKPIRIM--YSHRDPSIRK-SGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
N M N + + ++ RD K + + N+++KNL + L + F +G + S K
Sbjct: 174 NGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 233
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND-KQVYVGLFVRRQERAQQ 200
+ +D G+S+ +GFV +EN ++A A+ L+G + D K +YV + + ER Q+
Sbjct: 234 LMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQE 288
>gi|19922904|ref|NP_611924.1| CG4612, isoform A [Drosophila melanogaster]
gi|386768569|ref|NP_001246493.1| CG4612, isoform C [Drosophila melanogaster]
gi|195353161|ref|XP_002043074.1| GM11822 [Drosophila sechellia]
gi|195586434|ref|XP_002082979.1| GD24944 [Drosophila simulans]
gi|7291799|gb|AAF47219.1| CG4612, isoform A [Drosophila melanogaster]
gi|16648374|gb|AAL25452.1| LD36772p [Drosophila melanogaster]
gi|194127162|gb|EDW49205.1| GM11822 [Drosophila sechellia]
gi|194194988|gb|EDX08564.1| GD24944 [Drosophila simulans]
gi|220946122|gb|ACL85604.1| CG4612-PA [synthetic construct]
gi|220955844|gb|ACL90465.1| CG4612-PA [synthetic construct]
gi|383302680|gb|AFH08246.1| CG4612, isoform C [Drosophila melanogaster]
Length = 307
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 131/184 (71%), Gaps = 2/184 (1%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLN 177
++IKNL+ SIDNKA+ DTF+ FG +L+C VA D +G S+GYGFV F++EEAA+ AI+ +N
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 178 GMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAI 237
GML N+++V+V F+ R++R Q+ + F N+YV NL+E T++ L+++F +G ITS
Sbjct: 175 GMLCNNQKVHVVKFIPRRDREQEKAT-HFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 233
Query: 238 VMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNND-KVWYVGRAQKRAEREADLRAKF 296
+M D +G+SR FGFV +++P +A AAV L+G D K YV RA +AER+ ++ K
Sbjct: 234 LMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKL 293
Query: 297 EQER 300
E+ +
Sbjct: 294 EERK 297
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 111/188 (59%), Gaps = 14/188 (7%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
+Y+ NL ++ ++ + F FG I + V KD DG SR +GFV+F S +AA AA+EK+N
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G N++ +V + R +R EQE+ + ++ NLY+KNL + ++ L+E
Sbjct: 175 GMLCNNQKVHVVKFIPRRDR--------EQEKATHFK-----NLYVKNLSEEFTEQHLRE 221
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG-RKPLYVAVAQR 387
+F +G ITS K+M+D+ G S+ GF A+ P+ A A+ ++GK +G K LYVA A
Sbjct: 222 MFEPYGRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALS 281
Query: 388 KEERKARL 395
K ER+ +
Sbjct: 282 KAERQQEI 289
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 98/175 (56%), Gaps = 5/175 (2%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
+Y+ +LE++++ +YD FS +++ V +D+ +S GY +V++ + + A A E +
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDG-NSRGYGFVHFDSEEAARAAIEKV 173
Query: 90 NFMPINGKPIRIM--YSHRDPSIRK-SGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
N M N + + ++ RD K + + N+++KNL + L + F +G + S K
Sbjct: 174 NGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 233
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND-KQVYVGLFVRRQERAQQ 200
+ +D G+S+ +GFV +EN ++A A+ L+G + D K +YV + + ER Q+
Sbjct: 234 LMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQE 288
>gi|195489681|ref|XP_002092839.1| GE11444 [Drosophila yakuba]
gi|194178940|gb|EDW92551.1| GE11444 [Drosophila yakuba]
Length = 307
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 131/184 (71%), Gaps = 2/184 (1%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLN 177
++IKNL+ SIDNKA+ DTF+ FG +L+C VA D +G S+GYGFV F++EEAA+ AI+ +N
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 178 GMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAI 237
GML N+++V+V F+ R++R Q+ + F N+YV NL+E T++ L+++F +G ITS
Sbjct: 175 GMLCNNQKVHVVKFIPRRDREQEKAT-HFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 233
Query: 238 VMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNND-KVWYVGRAQKRAEREADLRAKF 296
+M D +G+SR FGFV +++P +A AAV L+G D K YV RA +AER+ ++ K
Sbjct: 234 LMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKL 293
Query: 297 EQER 300
E+ +
Sbjct: 294 EERK 297
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 111/188 (59%), Gaps = 14/188 (7%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
+Y+ NL ++ ++ + F FG I + V KD DG SR +GFV+F S +AA AA+EK+N
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G N++ +V + R +R EQE+ + ++ NLY+KNL + ++ L+E
Sbjct: 175 GMLCNNQKVHVVKFIPRRDR--------EQEKATHFK-----NLYVKNLSEEFTEQHLRE 221
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG-RKPLYVAVAQR 387
+F +G ITS K+M+D+ G S+ GF A+ P+ A A+ ++GK +G K LYVA A
Sbjct: 222 MFEPYGRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALS 281
Query: 388 KEERKARL 395
K ER+ +
Sbjct: 282 KAERQQEI 289
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 98/175 (56%), Gaps = 5/175 (2%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
+Y+ +LE++++ +YD FS +++ V +D+ +S GY +V++ + + A A E +
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDG-NSRGYGFVHFDSEEAARAAIEKV 173
Query: 90 NFMPINGKPIRIM--YSHRDPSIRK-SGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
N M N + + ++ RD K + + N+++KNL + L + F +G + S K
Sbjct: 174 NGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 233
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND-KQVYVGLFVRRQERAQQ 200
+ +D G+S+ +GFV +EN ++A A+ L+G + D K +YV + + ER Q+
Sbjct: 234 LMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQE 288
>gi|195383760|ref|XP_002050594.1| GJ22239 [Drosophila virilis]
gi|194145391|gb|EDW61787.1| GJ22239 [Drosophila virilis]
Length = 301
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 130/184 (70%), Gaps = 2/184 (1%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLN 177
++IKNL+ SIDNKA+ +TF+ FG +L+C VA D G S+GYGFV F++EEAA+ AI+ +N
Sbjct: 109 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEGNSRGYGFVHFDSEEAARAAIEKVN 168
Query: 178 GMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAI 237
GML N+++V+V F+ R++R Q+ + F N+YV NL+E T++ L+++F +G ITS
Sbjct: 169 GMLCNNQKVHVVKFIPRRDREQEKAT-HFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 227
Query: 238 VMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNND-KVWYVGRAQKRAEREADLRAKF 296
+M D +G+SR FGFV F++P +A AAV L+G D K YV RA +AER+ ++ K
Sbjct: 228 LMLDEEGRSRRFGFVAFENPQSAVAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKL 287
Query: 297 EQER 300
E+ +
Sbjct: 288 EERK 291
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 114/194 (58%), Gaps = 14/194 (7%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
+Y+ NL ++ ++ + + F FG I + V KD +G SR +GFV+F S +AA AA+EK+N
Sbjct: 109 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEGNSRGYGFVHFDSEEAARAAIEKVN 168
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G N++ +V + R +R EQE+ + ++ NLY+KNL + ++ L+E
Sbjct: 169 GMLCNNQKVHVVKFIPRRDR--------EQEKATHFK-----NLYVKNLSEEFTEQHLRE 215
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG-RKPLYVAVAQR 387
+F +G ITS K+M+D+ G S+ GF AF P+ A A+ ++GK +G K LYVA A
Sbjct: 216 MFEPYGRITSHKLMLDEEGRSRRFGFVAFENPQSAVAAVIGLHGKQLGDNKFLYVARALS 275
Query: 388 KEERKARLQAQFAQ 401
K ER+ + + +
Sbjct: 276 KAERQQEINRKLEE 289
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 98/175 (56%), Gaps = 5/175 (2%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
+Y+ +LE++++ +Y+ FS +++ V +D+ +S GY +V++ + + A A E +
Sbjct: 109 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEG-NSRGYGFVHFDSEEAARAAIEKV 167
Query: 90 NFMPINGKPIRIM--YSHRDPSIRK-SGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
N M N + + ++ RD K + + N+++KNL + L + F +G + S K
Sbjct: 168 NGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 227
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND-KQVYVGLFVRRQERAQQ 200
+ +D G+S+ +GFV FEN ++A A+ L+G + D K +YV + + ER Q+
Sbjct: 228 LMLDEEGRSRRFGFVAFENPQSAVAAVIGLHGKQLGDNKFLYVARALSKAERQQE 282
>gi|378756066|gb|EHY66091.1| hypothetical protein NERG_00787 [Nematocida sp. 1 ERTm2]
Length = 513
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/377 (31%), Positives = 206/377 (54%), Gaps = 23/377 (6%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQ-SKRSSLGYAYVNYSNPQDAANAKE 87
S+YVGD+ + ES L+ +FS+V Q+ +V + R + S YAYV + + A E
Sbjct: 20 SIYVGDIPTSTTESDLFQIFSKVGQIYTVIIPRKELSIVKDKCYAYVTFFDEASVPTAIE 79
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
NF +NG IR+M ++ S+ + GN+ IKNL DN+ L DTF FG ++SCKV
Sbjct: 80 TFNFYELNGSQIRVMPLDKE-SVVNNREGNIVIKNLPKETDNQTLYDTFIIFGPIVSCKV 138
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFV--RRQERAQQNVSPK 205
+S + G G++Q+++ + A+ AI+M+N +++N K++ V ++E+ ++NV
Sbjct: 139 VKNSLSECSGIGYIQYKDPKIAEVAIQMINKIMLNGKKLCAVQCVPNDKREKKRENVEKI 198
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
FTN+Y+ N + V +E++KK +G +TS V + G+ R F F N+++ + A AA+
Sbjct: 199 FTNIYMKNFPKGVEEEEIKKKLEEYGELTSFFVPRAETGEMRGFAFANYKTHEMAEAAIL 258
Query: 266 KLN------GTTNNDKVWYVGRAQKRAEREADLRAKF----EQERISRYEKLKGANLYLK 315
L+ G + + YV RA+ ++ER + F EQE + R N+Y+
Sbjct: 259 GLHDKPFFGGNSGEGENLYVQRAKLKSERVEETAGYFANPPEQE-VRR-------NIYIT 310
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI 375
NL +N+E + + FS++G I + K+ D ++ G+ + E+A +A+ N
Sbjct: 311 NLPGDLNEEDVVKYFSKYGPINTYKLGTDTKN-NRSYGYVFYQKAEDAAKAVELANKSEY 369
Query: 376 GRKPLYVAVAQRKEERK 392
+PL VA + K+ R+
Sbjct: 370 CGQPLGVAFFKCKKLRE 386
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 89/200 (44%), Gaps = 22/200 (11%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD--SDGKSRCFGFVNFQSPDAAAAAVE 265
++YV ++ + T+ DL +IF G I + I+ + S K +C+ +V F + A+E
Sbjct: 20 SIYVGDIPTSTTESDLFQIFSKVGQIYTVIIPRKELSIVKDKCYAYVTFFDEASVPTAIE 79
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
N + + +Q R ++E + + N+ +KNL +++
Sbjct: 80 TFN-------FYELNGSQIRV-------MPLDKESVVNN---REGNIVIKNLPKETDNQT 122
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
L + F FG I SCKV+ + G G+ + P+ A A+ +N M+ K L
Sbjct: 123 LYDTFIIFGPIVSCKVVKNSLSECSGIGYIQYKDPKIAEVAIQMINKIMLNGKKLCAVQC 182
Query: 386 ---QRKEERKARLQAQFAQI 402
++E+++ ++ F I
Sbjct: 183 VPNDKREKKRENVEKIFTNI 202
>gi|294875884|ref|XP_002767464.1| polyadenylate-binding protein 1-A, putative [Perkinsus marinus ATCC
50983]
gi|239869099|gb|EER00182.1| polyadenylate-binding protein 1-A, putative [Perkinsus marinus ATCC
50983]
Length = 230
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 122/169 (72%), Gaps = 5/169 (2%)
Query: 102 MYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFV 161
M+SHRDP++R+SG GNV++KNLD +IDNKAL DTF+ FG +LSCKVA+ +G+S+G+GFV
Sbjct: 1 MWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFGNILSCKVALTPDGKSRGFGFV 60
Query: 162 QFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK-FTNVYVNNLAETVTD 220
FE++E+A+ AI LNGM I +K VYV F + ER + +PK FTNVY+ ++ + +
Sbjct: 61 HFESDESAEAAIAKLNGMQIGEKTVYVAPFKKTAER--NDGTPKNFTNVYIKHIPASWNE 118
Query: 221 EDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNG 269
E +K+ FG FG ITS V +D K R F FVN+ + A AAVE+++G
Sbjct: 119 EKIKEEFGAFGEITSLAVQ--TDPKGRRFAFVNYAEFEQARAAVEEMDG 165
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 93/186 (50%), Gaps = 26/186 (13%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
NVYV NL + ++ L F FG I S V DGKSR FGFV+F+S ++A AA+ KL
Sbjct: 16 NVYVKNLDRNIDNKALYDTFSLFGNILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKL 75
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG +K YV +K AER F N+Y+K++ S N+EK+K
Sbjct: 76 NGMQIGEKTVYVAPFKKTAERNDGTPKNF-------------TNVYIKHIPASWNEEKIK 122
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
E F FG ITS V D G + F ++ E+A A+ EM+GK + R
Sbjct: 123 EEFGAFGEITSLAVQTDPKG--RRFAFVNYAEFEQARAAVEEMDGKDV-----------R 169
Query: 388 KEERKA 393
EE KA
Sbjct: 170 NEEEKA 175
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 87/167 (52%), Gaps = 10/167 (5%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
SG GNV YV +L++N++ LYD FS ++S +V +S G+ +V++ + + A
Sbjct: 12 SGAGNV--YVKNLDRNIDNKALYDTFSLFGNILSCKVALTPDGKSR-GFGFVHFESDESA 68
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSG----YGNVFIKNLDTSIDNKALCDTFAA 138
A LN M I K + + + + R G + NV+IK++ S + + + + F A
Sbjct: 69 EAAIAKLNGMQIGEKTVYVA-PFKKTAERNDGTPKNFTNVYIKHIPASWNEEKIKEEFGA 127
Query: 139 FGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQ 185
FG + S V D G+ + FV + E A+ A++ ++G + +++
Sbjct: 128 FGEITSLAVQTDPKGRR--FAFVNYAEFEQARAAVEEMDGKDVRNEE 172
>gi|297830144|ref|XP_002882954.1| hypothetical protein ARALYDRAFT_897861 [Arabidopsis lyrata subsp.
lyrata]
gi|297328794|gb|EFH59213.1| hypothetical protein ARALYDRAFT_897861 [Arabidopsis lyrata subsp.
lyrata]
Length = 406
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 173/329 (52%), Gaps = 16/329 (4%)
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
+ A +A L+G +++ K+++V F+ + ERA + + +FTNVYV NL E VT++ L +
Sbjct: 25 DSAGVSARSALHGSMVDGKKLFVAKFINKDERAAMSWNQEFTNVYVENLIENVTEDILHR 84
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
+F +G ++S +VM+D G+SR GFVNF + A AVE L G K +VG+A ++
Sbjct: 85 LFSQYGIVSSVVVMRDGMGRSRGLGFVNFCHLENAKKAVEFLCGRQLGSKTLFVGKALRK 144
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
ER L+ F I++ + +N+Y+KNL +S+ND +L+E+F +G I S KVM +
Sbjct: 145 DERMEMLKQHFRDNSIAK-PNMGWSNMYVKNLSESMNDTRLREIFGRYGQIVSAKVMRHE 203
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQF-AQIR- 403
+G SKG GF FS EE+ +A +N + KPL V V +RKE+ RL F Q R
Sbjct: 204 NGRSKGFGFVCFSNREESKQAKRYLN---VDGKPLVVRVTERKEDTLKRLHQYFHGQPRH 260
Query: 404 ------APGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGY-GFQQQVFPG 456
P P+ S +P + YY GT PQ +G+ V G
Sbjct: 261 YTQAPLVPSPTQPVLSYVPSSYGYLQPFHVGTSYYFMGT---QLPQMSGHQNITTYVAAG 317
Query: 457 LRPGGPNYIMPYHLQRQVHPGQRTGVRRS 485
P N + + +P ++GV R+
Sbjct: 318 KAPLKENRSLHLVYKHPAYPVAKSGVNRN 346
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 115/207 (55%), Gaps = 17/207 (8%)
Query: 79 PQDAA--NAKEALNFMPINGKPIRIM-YSHRDPSIRKSG---YGNVFIKNLDTSIDNKAL 132
P D+A +A+ AL+ ++GK + + + ++D S + NV+++NL ++ L
Sbjct: 23 PYDSAGVSARSALHGSMVDGKKLFVAKFINKDERAAMSWNQEFTNVYVENLIENVTEDIL 82
Query: 133 CDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFV 192
F+ +G V S V D G+S+G GFV F + E A+ A++ L G + K ++VG +
Sbjct: 83 HRLFSQYGIVSSVVVMRDGMGRSRGLGFVNFCHLENAKKAVEFLCGRQLGSKTLFVGKAL 142
Query: 193 RRQERAQ-------QNVSPK----FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD 241
R+ ER + N K ++N+YV NL+E++ D L++IFG +G I SA VM+
Sbjct: 143 RKDERMEMLKQHFRDNSIAKPNMGWSNMYVKNLSESMNDTRLREIFGRYGQIVSAKVMRH 202
Query: 242 SDGKSRCFGFVNFQSPDAAAAAVEKLN 268
+G+S+ FGFV F + + + A LN
Sbjct: 203 ENGRSKGFGFVCFSNREESKQAKRYLN 229
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 93/167 (55%), Gaps = 22/167 (13%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
++YV +L +NV E L+ LFSQ V SV V RD RS G +VN+ + + NAK+A
Sbjct: 67 NVYVENLIENVTEDILHRLFSQYGIVSSVVVMRDGMGRSR-GLGFVNFCHLE---NAKKA 122
Query: 89 LNFMP---------INGKPIR------IMYSH-RDPSIRK--SGYGNVFIKNLDTSIDNK 130
+ F+ GK +R ++ H RD SI K G+ N+++KNL S+++
Sbjct: 123 VEFLCGRQLGSKTLFVGKALRKDERMEMLKQHFRDNSIAKPNMGWSNMYVKNLSESMNDT 182
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLN 177
L + F +G ++S KV NG+SKG+GFV F N E ++ A + LN
Sbjct: 183 RLREIFGRYGQIVSAKVMRHENGRSKGFGFVCFSNREESKQAKRYLN 229
>gi|241831489|ref|XP_002414860.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
gi|215509072|gb|EEC18525.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
Length = 686
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 157/288 (54%), Gaps = 15/288 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++++ +L + L + F+ G VLS +V D +S GY +V F+ A+ A+
Sbjct: 12 SLYVGDLHPEVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+N I +K + + R + V NV++ NL +T+ ++ + F FG I S
Sbjct: 72 MNFDAIKNKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKTIDNKAMYDTFSAFGNILS 127
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V D + S+ +GFV+F++ +AA A+ K+NG N+K YVG+ R ERE L K
Sbjct: 128 CRVATDEEAASKGYGFVHFETEEAANKAISKVNGMLLNNKKVYVGKFIPRKEREKMLGDK 187
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
N+Y+KN D ++D+KL +F ++G ITS KVM D G ++G GF
Sbjct: 188 ARC----------FTNVYIKNFGDELDDDKLLVIFEKYGKITSAKVMTDDSGKNRGFGFV 237
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
+F P+ A RA+ E+NGK +G +PLYV AQ+K ER++ L+ F Q++
Sbjct: 238 SFEEPDSAERAVEELNGKDMGGRPLYVGRAQKKAERQSELKRHFEQLK 285
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 2/83 (2%)
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
S LA A+P D+ +MLGE+L+PL+ + P A K+TGMLLE+D +E+LH++E E+LK KV
Sbjct: 603 SMLAEATPHDQKQMLGERLFPLIHRMYPDLAGKITGMLLEIDNSELLHMLEHHESLKAKV 662
Query: 611 AEAMAVLQEAAARSDVNEKLGSL 633
EA+AVLQ A+ V +GSL
Sbjct: 663 EEAVAVLQAHQAKETV--VVGSL 683
>gi|195029531|ref|XP_001987626.1| GH22019 [Drosophila grimshawi]
gi|193903626|gb|EDW02493.1| GH22019 [Drosophila grimshawi]
Length = 304
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 129/184 (70%), Gaps = 2/184 (1%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLN 177
++IKNL+ SIDNKA+ +TF+ FG +L+C VA D G S+GYGFV F++EEAA+ AI+ +N
Sbjct: 112 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEGNSRGYGFVHFDSEEAARAAIEKVN 171
Query: 178 GMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAI 237
GML N+++V+V F+ R++R Q+ + F N+YV NL+E T++ L+++F +G ITS
Sbjct: 172 GMLCNNQKVHVVKFIPRRDREQEKAT-HFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 230
Query: 238 VMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNND-KVWYVGRAQKRAEREADLRAKF 296
+M D +G+SR FGFV F++P +A AAV L+G D K YV RA + ER+ ++ K
Sbjct: 231 LMLDEEGRSRRFGFVAFENPQSALAAVIGLHGKQLGDNKFLYVARALSKNERQQEINRKL 290
Query: 297 EQER 300
E+ +
Sbjct: 291 EERK 294
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 114/194 (58%), Gaps = 14/194 (7%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
+Y+ NL ++ ++ + + F FG I + V KD +G SR +GFV+F S +AA AA+EK+N
Sbjct: 112 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEGNSRGYGFVHFDSEEAARAAIEKVN 171
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G N++ +V + R +R EQE+ + ++ NLY+KNL + ++ L+E
Sbjct: 172 GMLCNNQKVHVVKFIPRRDR--------EQEKATHFK-----NLYVKNLSEEFTEQHLRE 218
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG-RKPLYVAVAQR 387
+F +G ITS K+M+D+ G S+ GF AF P+ A A+ ++GK +G K LYVA A
Sbjct: 219 MFEPYGRITSHKLMLDEEGRSRRFGFVAFENPQSALAAVIGLHGKQLGDNKFLYVARALS 278
Query: 388 KEERKARLQAQFAQ 401
K ER+ + + +
Sbjct: 279 KNERQQEINRKLEE 292
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 98/175 (56%), Gaps = 5/175 (2%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
+Y+ +LE++++ +Y+ FS +++ V +D+ +S GY +V++ + + A A E +
Sbjct: 112 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEG-NSRGYGFVHFDSEEAARAAIEKV 170
Query: 90 NFMPINGKPIRIM--YSHRDPSIRK-SGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
N M N + + ++ RD K + + N+++KNL + L + F +G + S K
Sbjct: 171 NGMLCNNQKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHK 230
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND-KQVYVGLFVRRQERAQQ 200
+ +D G+S+ +GFV FEN ++A A+ L+G + D K +YV + + ER Q+
Sbjct: 231 LMLDEEGRSRRFGFVAFENPQSALAAVIGLHGKQLGDNKFLYVARALSKNERQQE 285
>gi|56971379|gb|AAH88337.1| Pabpc4 protein, partial [Rattus norvegicus]
Length = 415
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 111/142 (78%), Gaps = 7/142 (4%)
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ---ERISRYEKLKGANLYLKNLDD 319
AVE++NG + K +VGRAQK+ ER+A+L+ KFEQ ERISRY+ G NLY+KNLDD
Sbjct: 2 AVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYIKNLDD 58
Query: 320 SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++G KP
Sbjct: 59 TIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKP 117
Query: 380 LYVAVAQRKEERKARLQAQFAQ 401
LYVA+AQRKEERKA L Q+ Q
Sbjct: 118 LYVALAQRKEERKAHLTNQYMQ 139
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 81/141 (57%), Gaps = 15/141 (10%)
Query: 171 NAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF-------------TNVYVNNLAET 217
A++ +NG ++ K ++VG ++ ER Q + KF N+Y+ NL +T
Sbjct: 1 KAVEEMNGKEMSGKSIFVGRAQKKVER-QAELKRKFEQLKQERISRYQGVNLYIKNLDDT 59
Query: 218 VTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVW 277
+ DE L+K F FG+ITSA VM + DG+S+ FGFV F SP+ A AV ++NG K
Sbjct: 60 IDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 118
Query: 278 YVGRAQKRAEREADLRAKFEQ 298
YV AQ++ ER+A L ++ Q
Sbjct: 119 YVALAQRKEERKAHLTNQYMQ 139
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 66/85 (77%)
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
S LA+A P ++ +MLGE+L+PL++ + A K+TGMLLE+D +E+LH++ESPE+L++KV
Sbjct: 328 SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKV 387
Query: 611 AEAMAVLQEAAARSDVNEKLGSLAV 635
EA+AVLQ A+ + +K+G++A
Sbjct: 388 DEAVAVLQAHHAKKEAAQKVGTVAA 412
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 62/99 (62%), Gaps = 6/99 (6%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N++IKNLD +ID++ L F+ FG++ S KV ++ +G+SKG+GFV F + E A A+ +
Sbjct: 50 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM 108
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLA 215
NG ++ K +YV L R++ER TN Y+ +A
Sbjct: 109 NGRIVGSKPLYVALAQRKEERKAH-----LTNQYMQRVA 142
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y V+LY+ +L+ +++ +L FS + S +V + + S G+ +V +S+P++A
Sbjct: 44 SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR--SKGFGFVCFSSPEEA 101
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
A +N + KP+ + + R RK+ N +++ +
Sbjct: 102 TKAVTEMNGRIVGSKPLYVALAQRKEE-RKAHLTNQYMQRV 141
>gi|432114066|gb|ELK36113.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 230
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 123/185 (66%), Gaps = 7/185 (3%)
Query: 220 DEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYV 279
DE LK +FG FG S VM D G S+ FGFV+F+ + AV+++NG N K Y+
Sbjct: 3 DERLKDLFGKFGPALSVKVMMDEGGTSKGFGFVSFKRHEDTQKAVDEVNGKELNRKQIYI 62
Query: 280 GRAQKRAEREADLRAKFE---QERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTI 336
RA K AE + +LR KFE Q+R +RY+ G NLY+KNLDD I++ L++ FS FGTI
Sbjct: 63 SRAHKTAEWQTELRCKFEHMNQDRATRYQ---GVNLYVKNLDDGIDEGCLQKEFSPFGTI 119
Query: 337 TSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQ 396
T K M++ G S+G GF FS PEEAT+A+ EMNG+++ KPL VA+AQRKEER+A L
Sbjct: 120 TGAKFMMEG-GPSEGFGFVRFSSPEEATKAVTEMNGRIVATKPLCVALAQRKEERQAHLT 178
Query: 397 AQFAQ 401
Q+ Q
Sbjct: 179 NQYMQ 183
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 97/189 (51%), Gaps = 15/189 (7%)
Query: 127 IDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQV 186
+D++ L D F FG LS KV +D G SKG+GFV F+ E Q A+ +NG +N KQ+
Sbjct: 1 MDDERLKDLFGKFGPALSVKVMMDEGGTSKGFGFVSFKRHEDTQKAVDEVNGKELNRKQI 60
Query: 187 YVGLFVRRQERAQQNVSPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGTI 233
Y+ + Q + KF N+YV NL + + + L+K F FGTI
Sbjct: 61 YISR-AHKTAEWQTELRCKFEHMNQDRATRYQGVNLYVKNLDDGIDEGCLQKEFSPFGTI 119
Query: 234 TSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLR 293
T A M + G S FGFV F SP+ A AV ++NG K V AQ++ ER+A L
Sbjct: 120 TGAKFMMEG-GPSEGFGFVRFSSPEEATKAVTEMNGRIVATKPLCVALAQRKEERQAHLT 178
Query: 294 AKFEQERIS 302
++ Q S
Sbjct: 179 NQYMQRMAS 187
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 25/194 (12%)
Query: 39 VNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKP 98
+++ +L DLF + +SV+V D+ +S G+ +V++ +D A + +N +N K
Sbjct: 1 MDDERLKDLFGKFGPALSVKVMMDEGG-TSKGFGFVSFKRHEDTQKAVDEVNGKELNRKQ 59
Query: 99 IRIMYSHR-----------------DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGT 141
I I +H+ D + R G N+++KNLD ID L F+ FGT
Sbjct: 60 IYISRAHKTAEWQTELRCKFEHMNQDRATRYQGV-NLYVKNLDDGIDEGCLQKEFSPFGT 118
Query: 142 VLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQN 201
+ K ++ G S+G+GFV+F + E A A+ +NG ++ K + V L R++ER
Sbjct: 119 ITGAKFMMEG-GPSEGFGFVRFSSPEEATKAVTEMNGRIVATKPLCVALAQRKEER---- 173
Query: 202 VSPKFTNVYVNNLA 215
TN Y+ +A
Sbjct: 174 -QAHLTNQYMQRMA 186
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 55/82 (67%)
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
++DE+LK+LF +FG S KVM+D+ G SKG GF +F E+ +A++E+NGK + RK +
Sbjct: 1 MDDERLKDLFGKFGPALSVKVMMDEGGTSKGFGFVSFKRHEDTQKAVDEVNGKELNRKQI 60
Query: 381 YVAVAQRKEERKARLQAQFAQI 402
Y++ A + E + L+ +F +
Sbjct: 61 YISRAHKTAEWQTELRCKFEHM 82
>gi|351704535|gb|EHB07454.1| Polyadenylate-binding protein 1 [Heterocephalus glaber]
Length = 281
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 120/182 (65%), Gaps = 4/182 (2%)
Query: 220 DEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYV 279
DE LK +F S VM D GKS+ F FV+F+ + A AV+++NG N K YV
Sbjct: 3 DERLKDLFR---PALSVKVMTDESGKSKGFRFVSFERHEDAQKAVDEMNGKELNGKQIYV 59
Query: 280 GRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSC 339
GRAQK+ E + + + KFEQ + + +G NLY+KNLDD I+DE L++ FS FGTITS
Sbjct: 60 GRAQKKVEPQTEPKHKFEQMKQDTITRYQGVNLYVKNLDDGIDDEHLRKEFSPFGTITSA 119
Query: 340 KVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQF 399
KVM++ G SKG GF FS PEEAT+A+ EMNG+ + KPLYVA+AQ KEE A L +Q+
Sbjct: 120 KVMME-GGRSKGFGFVCFSSPEEATKAVKEMNGRTVATKPLYVALAQLKEESPAHLTSQY 178
Query: 400 AQ 401
Q
Sbjct: 179 MQ 180
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 105/191 (54%), Gaps = 22/191 (11%)
Query: 127 IDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQV 186
+D++ L D F LS KV D +G+SKG+ FV FE E AQ A+ +NG +N KQ+
Sbjct: 1 MDDERLKDLFRP---ALSVKVMTDESGKSKGFRFVSFERHEDAQKAVDEMNGKELNGKQI 57
Query: 187 YVGLFVRRQERAQQNVSPKF---------------TNVYVNNLAETVTDEDLKKIFGHFG 231
YVG R Q++ + PK N+YV NL + + DE L+K F FG
Sbjct: 58 YVG---RAQKKVEPQTEPKHKFEQMKQDTITRYQGVNLYVKNLDDGIDDEHLRKEFSPFG 114
Query: 232 TITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
TITSA VM + G+S+ FGFV F SP+ A AV+++NG T K YV AQ + E A
Sbjct: 115 TITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVKEMNGRTVATKPLYVALAQLKEESPAH 173
Query: 292 LRAKFEQERIS 302
L +++ Q S
Sbjct: 174 LTSQYMQRMAS 184
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 94/175 (53%), Gaps = 23/175 (13%)
Query: 39 VNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKP 98
+++ +L DLF +SV+V D+S +S G+ +V++ +DA A + +N +NGK
Sbjct: 1 MDDERLKDLFRPA---LSVKVMTDESGKSK-GFRFVSFERHEDAQKAVDEMNGKELNGKQ 56
Query: 99 IRIMYSHR-----------------DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGT 141
I + + + D R G N+++KNLD ID++ L F+ FGT
Sbjct: 57 IYVGRAQKKVEPQTEPKHKFEQMKQDTITRYQGV-NLYVKNLDDGIDDEHLRKEFSPFGT 115
Query: 142 VLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
+ S KV ++ G+SKG+GFV F + E A A+K +NG + K +YV L ++E
Sbjct: 116 ITSAKVMME-GGRSKGFGFVCFSSPEEATKAVKEMNGRTVATKPLYVALAQLKEE 169
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
++DE+LK+LF S KVM D+ G SKG F +F E+A +A++EMNGK + K +
Sbjct: 1 MDDERLKDLFR---PALSVKVMTDESGKSKGFRFVSFERHEDAQKAVDEMNGKELNGKQI 57
Query: 381 YVAVAQRKEERKARLQAQFAQIR 403
YV AQ+K E + + +F Q++
Sbjct: 58 YVGRAQKKVEPQTEPKHKFEQMK 80
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 4/45 (8%)
Query: 591 MDQTEVLHLIESPEALKTKVAEAMAVLQ----EAAARSDVNEKLG 631
+D +E+LH++ESPE+L +K EA+AVLQ + AA+ VN G
Sbjct: 233 IDNSELLHMLESPESLCSKADEAVAVLQAHQAKEAAQKAVNSATG 277
>gi|147864210|emb|CAN80948.1| hypothetical protein VITISV_016699 [Vitis vinifera]
Length = 183
Score = 168 bits (426), Expect = 6e-39, Method: Composition-based stats.
Identities = 80/130 (61%), Positives = 98/130 (75%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG LE NV +S L+DLF Q+ VVSV++C D S R SL Y VN+ NPQD A A
Sbjct: 17 STSLYVGGLESNVTDSHLFDLFGQLGPVVSVQICCDLSTRRSLNYGCVNHGNPQDTARAL 76
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
+ LNF +NGKP RIMYSH DPS+RKSG GN+FIKNLD +D+KAL DTF+AFG +LSCK
Sbjct: 77 DVLNFTLLNGKPTRIMYSHCDPSVRKSGTGNIFIKNLDKRVDHKALHDTFSAFGNILSCK 136
Query: 147 VAIDSNGQSK 156
VA D++G +
Sbjct: 137 VAADASGSYR 146
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/164 (30%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-SDGKSRCFGFVNFQSPDAAAAAVE 265
T++YV L VTD L +FG G + S + D S +S +G VN +P A A++
Sbjct: 18 TSLYVGGLESNVTDSHLFDLFGQLGPVVSVQICCDLSTRRSLNYGCVNHGNPQDTARALD 77
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LN T N G+ + D + K N+++KNLD ++ +
Sbjct: 78 VLNFTLLN------GKPTRIMYSHCDPSVR----------KSGTGNIFIKNLDKRVDHKA 121
Query: 326 LKELFSEFGTITSCKVMVD-----------QHGFSKGSGFAAFS 358
L + FS FG I SCKV D +H FS+G+ FS
Sbjct: 122 LHDTFSAFGNILSCKVAADASGSYREDPSIKHNFSEGNKRKEFS 165
Score = 48.9 bits (115), Expect = 0.008, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 5/132 (3%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKM 175
++++ L++++ + L D F G V+S ++ D S +S YG V N + A+ +
Sbjct: 19 SLYVGGLESNVTDSHLFDLFGQLGPVVSVQICCDLSTRRSLNYGCVNHGNPQDTARALDV 78
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN L+N K + ++ +++ + N+++ NL + V + L F FG I S
Sbjct: 79 LNFTLLNGKPTRI-MYSHCDPSVRKSGT---GNIFIKNLDKRVDHKALHDTFSAFGNILS 134
Query: 236 AIVMKDSDGKSR 247
V D+ G R
Sbjct: 135 CKVAADASGSYR 146
>gi|414588972|tpg|DAA39543.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 246
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/239 (47%), Positives = 144/239 (60%), Gaps = 27/239 (11%)
Query: 415 IPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGP--NYIMPYHLQR 472
+P + G P +G QQL+YGQ P + PQA G+ FQQ + PG+RPGGP N++MP Q
Sbjct: 14 MPMFPPGVPGVG-QQLFYGQPPPAFINPQA-GFAFQQPLMPGMRPGGPMPNFMMPMVQQG 71
Query: 473 QVHPGQRTGVRRSGNTHQMQQPQFMRNSNQ-------GIRYLDNARNGTD---QSVVSMV 522
Q QR RR+G MQQP M Q G RY R D SV +++
Sbjct: 72 QQP--QRPAGRRAGG---MQQPMPMGGQQQVFPRGGRGYRY-PTGRGMPDPGMHSVGAVM 125
Query: 523 PVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHAS 582
P +E+ GMP + P PVPI L +ALA+A PD + MLGE LYPLVE +E A+
Sbjct: 126 PPSYEMGGMP---MREAAPQPVPIGALATALANAPPDQQRLMLGENLYPLVEQLEREQAA 182
Query: 583 KVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVN----EKLGSLAVNE 637
KVTGMLLEMDQTEVLHL+ESP+ALK KVAEAM VL+ A N ++L +L++N+
Sbjct: 183 KVTGMLLEMDQTEVLHLLESPDALKAKVAEAMEVLRSAQHLQQSNVSTEQQLANLSLND 241
>gi|110002613|gb|AAI18569.1| PABPC4 protein [Homo sapiens]
Length = 252
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/138 (60%), Positives = 108/138 (78%), Gaps = 7/138 (5%)
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ---ERISRYEKLKGANLYLKNLDDSIND 323
+NG + K+ +VGRAQK+ ER+A+L+ KFEQ ERISRY+ G NLY+KNLDD+I+D
Sbjct: 1 MNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYIKNLDDTIDD 57
Query: 324 EKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVA 383
EKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++G KPLYVA
Sbjct: 58 EKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVA 116
Query: 384 VAQRKEERKARLQAQFAQ 401
+AQRKEERKA L Q+ Q
Sbjct: 117 LAQRKEERKAHLTNQYMQ 134
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 78/136 (57%), Gaps = 15/136 (11%)
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKF-------------TNVYVNNLAETVTDED 222
+NG I+ K ++VG ++ ER Q + KF N+Y+ NL +T+ DE
Sbjct: 1 MNGKEISGKIIFVGRAQKKVER-QAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 59
Query: 223 LKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRA 282
L+K F FG+ITSA VM + DG+S+ FGFV F SP+ A AV ++NG K YV A
Sbjct: 60 LRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 118
Query: 283 QKRAEREADLRAKFEQ 298
Q++ ER+A L ++ Q
Sbjct: 119 QRKEERKAHLTNQYMQ 134
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 62/99 (62%), Gaps = 6/99 (6%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N++IKNLD +ID++ L F+ FG++ S KV ++ +G+SKG+GFV F + E A A+ +
Sbjct: 45 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM 103
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLA 215
NG ++ K +YV L R++ER TN Y+ +A
Sbjct: 104 NGRIVGSKPLYVALAQRKEERKAH-----LTNQYMQRVA 137
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y V+LY+ +L+ +++ +L FS + S +V + + S G+ +V +S+P++A
Sbjct: 39 SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR--SKGFGFVCFSSPEEA 96
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
A +N + KP+ + + R RK+ N +++ +
Sbjct: 97 TKAVTEMNGRIVGSKPLYVALAQRKEE-RKAHLTNQYMQRV 136
>gi|78070599|gb|AAI06909.1| PABPC4 protein [Homo sapiens]
Length = 281
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/138 (60%), Positives = 108/138 (78%), Gaps = 7/138 (5%)
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ---ERISRYEKLKGANLYLKNLDDSIND 323
+NG + K+ +VGRAQK+ ER+A+L+ KFEQ ERISRY+ G NLY+KNLDD+I+D
Sbjct: 1 MNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQ---GVNLYIKNLDDTIDD 57
Query: 324 EKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVA 383
EKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++G KPLYVA
Sbjct: 58 EKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVA 116
Query: 384 VAQRKEERKARLQAQFAQ 401
+AQRKEERKA L Q+ Q
Sbjct: 117 LAQRKEERKAHLTNQYMQ 134
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 78/136 (57%), Gaps = 15/136 (11%)
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKF-------------TNVYVNNLAETVTDED 222
+NG I+ K ++VG ++ ER Q + KF N+Y+ NL +T+ DE
Sbjct: 1 MNGKEISGKIIFVGRAQKKVER-QAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 59
Query: 223 LKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRA 282
L+K F FG+ITSA VM + DG+S+ FGFV F SP+ A AV ++NG K YV A
Sbjct: 60 LRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 118
Query: 283 QKRAEREADLRAKFEQ 298
Q++ ER+A L ++ Q
Sbjct: 119 QRKEERKAHLTNQYMQ 134
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 62/99 (62%), Gaps = 6/99 (6%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N++IKNLD +ID++ L F+ FG++ S KV ++ +G+SKG+GFV F + E A A+ +
Sbjct: 45 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM 103
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLA 215
NG ++ K +YV L R++ER TN Y+ +A
Sbjct: 104 NGRIVGSKPLYVALAQRKEERKAH-----LTNQYMQRVA 137
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y V+LY+ +L+ +++ +L FS + S +V + + S G+ +V +S+P++A
Sbjct: 39 SRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR--SKGFGFVCFSSPEEA 96
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
A +N + KP+ + + R RK+ N +++ +
Sbjct: 97 TKAVTEMNGRIVGSKPLYVALAQRKEE-RKAHLTNQYMQRV 136
>gi|281344898|gb|EFB20482.1| hypothetical protein PANDA_020836 [Ailuropoda melanoleuca]
Length = 674
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 163/301 (54%), Gaps = 29/301 (9%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENE--------- 166
++++ +L + + L + F+ G VLS V D +S GY +V F+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQQPADVMPTSTS 71
Query: 167 ----EAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDED 222
+ A+ +N +I K + + R + V NV++ NL +++ ++
Sbjct: 72 SSPLTVTERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVG----NVFIKNLDKSIDNKA 127
Query: 223 LKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRA 282
L F FG I S V+ D +G S+ + FV+F++ +AA A+EK+NG ND+ +VGR
Sbjct: 128 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRF 186
Query: 283 QKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVM 342
+ R EREA+L AK ++ N+Y+KN + ++DE LKELFS+FG S KVM
Sbjct: 187 KSRKEREAELGAKAKE----------FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVM 236
Query: 343 VDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQI 402
D G SKG GF ++ E+A +A+ EMNGK I K ++V AQ+K ER+A L+ +F Q+
Sbjct: 237 RDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQL 296
Query: 403 R 403
+
Sbjct: 297 K 297
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 535 PVETPRP-VPV----PISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLL 589
P++ P+P V V P++ S LA+A P ++ +MLGE+L+PL++ + A K+TGMLL
Sbjct: 568 PLQAPQPAVHVQGQEPLTA--SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLL 625
Query: 590 EMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVNEKLGSLA 634
E+D +E+LH++ESPE+L++KV EA+AVLQ A+ + +K+G++A
Sbjct: 626 EIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVA 670
>gi|302408078|ref|XP_003001874.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
gi|261359595|gb|EEY22023.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
Length = 555
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 125/239 (52%), Gaps = 41/239 (17%)
Query: 1 MEATGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVC 60
+E A TA T +AVP + SLYVG+LE V E+ L++LFS + V S+RVC
Sbjct: 36 VEGAQGDADTAGPTP--NSAVPQPQASASLYVGELEPQVTEAMLFELFSHIGPVASIRVC 93
Query: 61 RDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFI 120
RD R SLGYAYVNY+ D A E LN+ ING+P RIM+S RDP++RK+G GNVFI
Sbjct: 94 RDAVTRRSLGYAYVNYNTTSDGEKALEELNYTVINGRPCRIMWSQRDPALRKNGQGNVFI 153
Query: 121 KNLDTSIDNKALCDTFAAFGTVLSCKVAI------------------DSN---------- 152
KNLD +IDNKAL DT + K DS
Sbjct: 154 KNLDVAIDNKALHDTISEGEDEDKVKEEPKEGAEEETPAPEAEVKKEDSETDAESQEAAD 213
Query: 153 -----------GQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
G+SKG+GFV F N E A A+ +N +I++K +YV L R+ R Q
Sbjct: 214 KKDAKKGDKKLGKSKGFGFVCFSNPEDATKAVADMNQRMIDNKPLYVALAQRKDVRKNQ 272
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 135/520 (25%), Positives = 204/520 (39%), Gaps = 153/520 (29%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV L VT+ L ++F H G + S V +D+ +S + +VN+ + A+E+
Sbjct: 62 SLYVGELEPQVTEAMLFELFSHIGPVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKALEE 121
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
LN T N + + +Q R+ LR + N+++KNLD +I+++ L
Sbjct: 122 LNYTVINGRPCRIMWSQ----RDPALRKNGQ------------GNVFIKNLDVAIDNKAL 165
Query: 327 KELFSEFGTITSCKVMVDQH---------------------------------------G 347
+ SE K + G
Sbjct: 166 HDTISEGEDEDKVKEEPKEGAEEETPAPEAEVKKEDSETDAESQEAADKKDAKKGDKKLG 225
Query: 348 FSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERK------------ARL 395
SKG GF FS PE+AT+A+ +MN +MI KPLYVA+AQRK+ RK R+
Sbjct: 226 KSKGFGFVCFSNPEDATKAVADMNQRMIDNKPLYVALAQRKDVRKNQLEQSIQARNQMRM 285
Query: 396 QAQFAQIRAPGGMSPLASGIPGYHHG-----------APRLGPQQLYYGQGTPGLMP--- 441
Q+ AQ P PG G P +G + G+ PG P
Sbjct: 286 QSAAAQAGMPNQFMQQPVYFPGQQPGFLPQGGRGMPFPPNMGMPNIQGGR--PGQYPAGF 343
Query: 442 PQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSN 501
PQ G G QQ+ P + Y + Q PG G Q PQFM
Sbjct: 344 PQQGGRGIPQQLPPNM----------YGVPGQFPPG--------GFPAQANNPQFMA--- 382
Query: 502 QGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRP-------------------- 541
++ + A G + P + GMPA P+ P
Sbjct: 383 -AMQQVQQASMGGGRGQGGRGP----MQGMPAGPMGPGAPGYPPNRQQPGQAGGRGGRNG 437
Query: 542 --------------------VPVPISTLTSALASASPDDR--TRMLGEQLYPLVENIEPV 579
P +S + L +A+ D R +++GE ++P + +P
Sbjct: 438 QQGNFPPQGGRGAPGAGENTPPQGLSAIQLQLNNAT-DARQQKQIIGELIFPKIAAQQPE 496
Query: 580 HASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQE 619
A K+TGMLLEM+ +E++ LIE A+K KV EA+ V +E
Sbjct: 497 LAGKITGMLLEMENSELITLIEDDNAMKLKVDEALGVYEE 536
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEEATRALN 368
A+LY+ L+ + + L ELFS G + S +V D S G + ++ + +AL
Sbjct: 61 ASLYVGELEPQVTEAMLFELFSHIGPVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKALE 120
Query: 369 EMNGKMIGRKPLYVAVAQR 387
E+N +I +P + +QR
Sbjct: 121 ELNYTVINGRPCRIMWSQR 139
>gi|296081049|emb|CBI18330.3| unnamed protein product [Vitis vinifera]
Length = 145
Score = 164 bits (416), Expect = 1e-37, Method: Composition-based stats.
Identities = 77/131 (58%), Positives = 94/131 (71%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SLYVG LE NV +S L+DLF Q+ VVSV++C D S R SL Y VN+ NPQD A
Sbjct: 14 STSLYVGGLESNVTDSHLFDLFGQLGPVVSVQICCDLSTRRSLNYGCVNHGNPQDTVRAL 73
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
+ LNF +NGKP RIMYSH DPS+RKSG N+FIKNLD +D+KAL DTF+ FG + SCK
Sbjct: 74 DVLNFTHLNGKPTRIMYSHCDPSVRKSGTRNIFIKNLDKRVDHKALRDTFSTFGNIFSCK 133
Query: 147 VAIDSNGQSKG 157
VA D++G G
Sbjct: 134 VAADASGSYSG 144
Score = 63.5 bits (153), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 17/146 (11%)
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-SDGKSRCFGFVNFQSPDAAAAAVE 265
T++YV L VTD L +FG G + S + D S +S +G VN +P A++
Sbjct: 15 TSLYVGGLESNVTDSHLFDLFGQLGPVVSVQICCDLSTRRSLNYGCVNHGNPQDTVRALD 74
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
LN T N G+ + D + R N+++KNLD ++ +
Sbjct: 75 VLNFTHLN------GKPTRIMYSHCDPSVRKSGTR----------NIFIKNLDKRVDHKA 118
Query: 326 LKELFSEFGTITSCKVMVDQHGFSKG 351
L++ FS FG I SCKV D G G
Sbjct: 119 LRDTFSTFGNIFSCKVAADASGSYSG 144
Score = 46.2 bits (108), Expect = 0.056, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKM 175
++++ L++++ + L D F G V+S ++ D S +S YG V N + A+ +
Sbjct: 16 SLYVGGLESNVTDSHLFDLFGQLGPVVSVQICCDLSTRRSLNYGCVNHGNPQDTVRALDV 75
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN +N K + ++ +++ + N+++ NL + V + L+ F FG I S
Sbjct: 76 LNFTHLNGKPTRI-MYSHCDPSVRKSGT---RNIFIKNLDKRVDHKALRDTFSTFGNIFS 131
Query: 236 AIVMKDSDG 244
V D+ G
Sbjct: 132 CKVAADASG 140
>gi|396082305|gb|AFN83915.1| polyadenylate-binding protein 2 [Encephalitozoon romaleae SJ-2008]
Length = 415
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 159/286 (55%), Gaps = 12/286 (4%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIK- 174
GN+F+KNL S +K L D F+ FG ++SCKVA G+SKGYGFVQF+ ++AA+ IK
Sbjct: 11 GNIFVKNLPESFTSKDLDDAFSMFGEIVSCKVATTPQGKSKGYGFVQFKEKKAAKKVIKN 70
Query: 175 --MLNGMLINDKQVYVGLFVRRQERAQ-QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFG 231
LNG+++ ++ V L+ ++ + + VS FTN ++ N T+++L ++ +G
Sbjct: 71 FNNLNGLMLGGNKIAVELYNPDMKKGESKKVSTMFTNCFIKNFPVDTTEKELLELLVRYG 130
Query: 232 TITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNG------TTNNDKVWYVGRAQKR 285
+TS DGK + F F NF+S ++A A+ L+G + + + +Y+ + Q++
Sbjct: 131 KVTSLYFPIKDDGKPKGFAFANFESHESALNAINNLHGAFPFDSSKDGGEPFYIQKGQRK 190
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ 345
ER +LR FEQ +S + NLY+ N+ + E+L +F EFG+ITS V +D
Sbjct: 191 EERAEELRKMFEQ--LSMQGQSYRKNLYITNIPEGFGAEELNNIFKEFGSITSMSVGIDG 248
Query: 346 HGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEER 391
K + +S PEEA+ A+ N + L V+ + K ER
Sbjct: 249 ANSQKQYAYICYSTPEEASIAVERGNEIYLDGNRLQVSYFKNKLER 294
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 125/274 (45%), Gaps = 33/274 (12%)
Query: 22 PSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQD 81
P GN+ +V +L ++ L D FS ++VS +V +S GY +V + +
Sbjct: 7 PPETGNI--FVKNLPESFTSKDLDDAFSMFGEIVSCKVATTPQGKSK-GYGFVQFK--EK 61
Query: 82 AANAKEALNFMPINGKPI---RIMYSHRDPSIRK-------SGYGNVFIKNLDTSIDNKA 131
A K NF +NG + +I +P ++K + + N FIKN K
Sbjct: 62 KAAKKVIKNFNNLNGLMLGGNKIAVELYNPDMKKGESKKVSTMFTNCFIKNFPVDTTEKE 121
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQ------ 185
L + +G V S I +G+ KG+ F FE+ E+A NAI L+G D
Sbjct: 122 LLELLVRYGKVTSLYFPIKDDGKPKGFAFANFESHESALNAINNLHGAFPFDSSKDGGEP 181
Query: 186 VYVGLFVRRQERAQQNVSPKF-----------TNVYVNNLAETVTDEDLKKIFGHFGTIT 234
Y+ R++ERA++ + F N+Y+ N+ E E+L IF FG+IT
Sbjct: 182 FYIQKGQRKEERAEE-LRKMFEQLSMQGQSYRKNLYITNIPEGFGAEELNNIFKEFGSIT 240
Query: 235 SAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
S V D + + ++ + +P+ A+ AVE+ N
Sbjct: 241 SMSVGIDGANSQKQYAYICYSTPEEASIAVERGN 274
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 101/221 (45%), Gaps = 19/221 (8%)
Query: 192 VRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGF 251
+R+ ER P+ N++V NL E+ T +DL F FG I S V GKS+ +GF
Sbjct: 1 MRKDERP-----PETGNIFVKNLPESFTSKDLDDAFSMFGEIVSCKVATTPQGKSKGYGF 55
Query: 252 VNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGAN 311
V F+ AA ++ N N + + G D++ K E +++S N
Sbjct: 56 VQFKEKKAAKKVIKNFN---NLNGLMLGGNKIAVELYNPDMK-KGESKKVSTM----FTN 107
Query: 312 LYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMN 371
++KN +++L EL +G +TS + G KG FA F E A A+N ++
Sbjct: 108 CFIKNFPVDTTEKELLELLVRYGKVTSLYFPIKDDGKPKGFAFANFESHESALNAINNLH 167
Query: 372 GKM------IGRKPLYVAVAQRKEERKARLQAQFAQIRAPG 406
G G +P Y+ QRKEER L+ F Q+ G
Sbjct: 168 GAFPFDSSKDGGEPFYIQKGQRKEERAEELRKMFEQLSMQG 208
>gi|33504432|emb|CAD43730.1| putative poly(A)-binding protein [Mangifera indica]
Length = 130
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/124 (65%), Positives = 103/124 (83%), Gaps = 6/124 (4%)
Query: 305 EKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEAT 364
+K +GANLY+KNLDDSI+D+KLK+LFS+FG+ITSCKVM D +G S+GSGF AF+ PEEA+
Sbjct: 9 DKFQGANLYMKNLDDSIDDDKLKQLFSQFGSITSCKVMRDPNGISRGSGFVAFTTPEEAS 68
Query: 365 RALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAP 423
RA+ EMNGKM+ KPL+VA+AQRKE+R+ARLQAQF+QIR P M+P +AS +P Y P
Sbjct: 69 RAILEMNGKMVVSKPLFVALAQRKEDRRARLQAQFSQIR-PVAMAPSVASRMPMY----P 123
Query: 424 RLGP 427
GP
Sbjct: 124 PCGP 127
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 69/107 (64%), Gaps = 2/107 (1%)
Query: 196 ERAQQNVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVN 253
E+A V+ KF N+Y+ NL +++ D+ LK++F FG+ITS VM+D +G SR GFV
Sbjct: 1 EQAWNEVADKFQGANLYMKNLDDSIDDDKLKQLFSQFGSITSCKVMRDPNGISRGSGFVA 60
Query: 254 FQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQER 300
F +P+ A+ A+ ++NG K +V AQ++ +R A L+A+F Q R
Sbjct: 61 FTTPEEASRAILEMNGKMVVSKPLFVALAQRKEDRRARLQAQFSQIR 107
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKM 175
N+++KNLD SID+ L F+ FG++ SCKV D NG S+G GFV F E A AI
Sbjct: 14 ANLYMKNLDDSIDDDKLKQLFSQFGSITSCKVMRDPNGISRGSGFVAFTTPEEASRAILE 73
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETV 218
+NG ++ K ++V L R+++R + + +F+ + +A +V
Sbjct: 74 MNGKMVVSKPLFVALAQRKEDR-RARLQAQFSQIRPVAMAPSV 115
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
V + +LY+ +L+ ++++ +L LFSQ + S +V RD + S G +V ++ P+
Sbjct: 7 VADKFQGANLYMKNLDDSIDDDKLKQLFSQFGSITSCKVMRDPNGISR-GSGFVAFTTPE 65
Query: 81 DAANAKEALNFMPINGKPIRIMYSHR 106
+A+ A +N + KP+ + + R
Sbjct: 66 EASRAILEMNGKMVVSKPLFVALAQR 91
>gi|293335667|ref|NP_001167831.1| uncharacterized protein LOC100381531 [Zea mays]
gi|223944311|gb|ACN26239.1| unknown [Zea mays]
Length = 249
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/239 (46%), Positives = 146/239 (61%), Gaps = 24/239 (10%)
Query: 415 IPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGP--NYIMPYHLQR 472
+P + P +G QQL+YGQ P + PQA G+ FQQ + PG+RPGGP N++MP Q
Sbjct: 14 MPMFPPSVPGVG-QQLFYGQPPPAFINPQA-GFAFQQPMMPGMRPGGPMPNFMMPMVQQG 71
Query: 473 QVHPGQRTGVRRSGNTHQMQQPQFMRNSNQ-------GIRYLDNARNGTD---QSVVSMV 522
Q QR RR+G+ MQQP M + Q G RY R D +V +++
Sbjct: 72 QQP--QRPAGRRAGSGG-MQQPMPMGSQQQIFPRGGRGYRY-ATGRGMPDPGMHNVGAVM 127
Query: 523 PVPFEVSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHAS 582
P P+E+ GM +PVP I L +ALA+ASPD + MLGE LYPLVE +E A+
Sbjct: 128 PSPYEMGGMAMRDAGVSQPVP--IGALATALANASPDQQRLMLGENLYPLVEQLEREQAA 185
Query: 583 KVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEA----AARSDVNEKLGSLAVNE 637
KVTGMLLEMDQTEVLHL+ESP+ALK KVAEAM VL+ A + + ++L +L++N+
Sbjct: 186 KVTGMLLEMDQTEVLHLLESPDALKAKVAEAMEVLRSAQHLQQSNASTEQQLANLSLND 244
>gi|47229360|emb|CAF99348.1| unnamed protein product [Tetraodon nigroviridis]
Length = 128
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 74/123 (60%), Positives = 91/123 (73%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+ Y SLYVGDL +V E+ LY+ FS ++S+RVCRD R SLGYAYVN+ P DA
Sbjct: 6 ASYPMASLYVGDLHPDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF I G+P+RIM+S RDPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +
Sbjct: 66 ERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNI 125
Query: 143 LSC 145
LSC
Sbjct: 126 LSC 128
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 25/137 (18%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEK 266
++YV +L VT+ L + F G I S V +D +S + +VNFQ P A A++
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 267 LNGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
+N + +W ++R+ LR K N+++KNLD SI+
Sbjct: 72 MNFDVIKGRPVRIMW--------SQRDPSLR------------KSGVGNIFIKNLDKSID 111
Query: 323 DEKLKELFSEFGTITSC 339
++ L + FS FG I SC
Sbjct: 112 NKALYDTFSAFGNILSC 128
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFEN 165
+PS ++++ +L + L + F+ G +LS +V D +S GY +V F+
Sbjct: 2 NPSAASYPMASLYVGDLHPDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 166 EEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKK 225
A+ A+ +N +I + V + R + V N+++ NL +++ ++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVG----NIFIKNLDKSIDNKALYD 117
Query: 226 IFGHFGTITSA 236
F FG I S
Sbjct: 118 TFSAFGNILSC 128
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITS---CKVMVDQHGFSKGSGFAAFSMPEEATRA 366
A+LY+ +L + + L E FS G I S C+ M+ + S G + F P +A RA
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGAILSIRVCRDMITRR--SLGYAYVNFQQPADAERA 68
Query: 367 LNEMNGKMIGRKPLYVAVAQR 387
L+ MN +I +P+ + +QR
Sbjct: 69 LDTMNFDVIKGRPVRIMWSQR 89
>gi|47198027|emb|CAF89020.1| unnamed protein product [Tetraodon nigroviridis]
Length = 383
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 109/160 (68%), Gaps = 8/160 (5%)
Query: 187 YVGLFVRRQERAQQNVSP--KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG 244
+VG F R+ER ++ S KFTNVY+ N E TDE LK++F FG S VMKD G
Sbjct: 1 FVGNFKSRKEREEELGSKALKFTNVYIKNFGEDYTDEKLKEVFSAFGRTLSVRVMKDERG 60
Query: 245 KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE---QERI 301
+SR FGFVNF A AV+++NGT N KV YVGRAQKR ER+ +L+ KFE Q+RI
Sbjct: 61 RSRGFGFVNFAHHGDAQKAVDEMNGTELNGKVIYVGRAQKRLERQGELKRKFELIKQDRI 120
Query: 302 SRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKV 341
RY+ G NLY+KNLDD I+DE+L++ F+ +GTITS KV
Sbjct: 121 QRYQ---GVNLYVKNLDDGIDDERLRKEFAPYGTITSAKV 157
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 76/137 (55%), Gaps = 14/137 (10%)
Query: 115 YGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIK 174
+ NV+IKN ++ L + F+AFG LS +V D G+S+G+GFV F + AQ A+
Sbjct: 22 FTNVYIKNFGEDYTDEKLKEVFSAFGRTLSVRVMKDERGRSRGFGFVNFAHHGDAQKAVD 81
Query: 175 MLNGMLINDKQVYVGLFVRRQERAQQNVSPKF-------------TNVYVNNLAETVTDE 221
+NG +N K +YVG +R ER Q + KF N+YV NL + + DE
Sbjct: 82 EMNGTELNGKVIYVGRAQKRLER-QGELKRKFELIKQDRIQRYQGVNLYVKNLDDGIDDE 140
Query: 222 DLKKIFGHFGTITSAIV 238
L+K F +GTITSA V
Sbjct: 141 RLRKEFAPYGTITSAKV 157
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 74/126 (58%), Gaps = 10/126 (7%)
Query: 278 YVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTIT 337
+VG + R ERE +L +K LK N+Y+KN + DEKLKE+FS FG
Sbjct: 1 FVGNFKSRKEREEELGSK----------ALKFTNVYIKNFGEDYTDEKLKEVFSAFGRTL 50
Query: 338 SCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQA 397
S +VM D+ G S+G GF F+ +A +A++EMNG + K +YV AQ++ ER+ L+
Sbjct: 51 SVRVMKDERGRSRGFGFVNFAHHGDAQKAVDEMNGTELNGKVIYVGRAQKRLERQGELKR 110
Query: 398 QFAQIR 403
+F I+
Sbjct: 111 KFELIK 116
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 19/137 (13%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++Y+ + ++ + +L ++FS + +SVRV +D+ RS G+ +VN+++ DA A +
Sbjct: 23 TNVYIKNFGEDYTDEKLKEVFSAFGRTLSVRVMKDERGRSR-GFGFVNFAHHGDAQKAVD 81
Query: 88 ALNFMPINGKPIRIMYSHR-----------------DPSIRKSGYGNVFIKNLDTSIDNK 130
+N +NGK I + + + D R G N+++KNLD ID++
Sbjct: 82 EMNGTELNGKVIYVGRAQKRLERQGELKRKFELIKQDRIQRYQGV-NLYVKNLDDGIDDE 140
Query: 131 ALCDTFAAFGTVLSCKV 147
L FA +GT+ S KV
Sbjct: 141 RLRKEFAPYGTITSAKV 157
>gi|297791101|ref|XP_002863435.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309270|gb|EFH39694.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 341
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 156/300 (52%), Gaps = 59/300 (19%)
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
D+ + L E T T+ + + S+GSGF AFS PEEA+RA+ EMNGKMI KPLYV
Sbjct: 84 DDNVPSLIEEVITTTTHRSL----SLSRGSGFVAFSTPEEASRAITEMNGKMIVTKPLYV 139
Query: 383 AVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPP 442
A+AQRKE+ KARLQ M P+ + P +GP+ Y G P +
Sbjct: 140 ALAQRKEDCKARLQ-----------MRPV--------NMPPAVGPRMQMYPPGGPPM--- 177
Query: 443 QAAGYGFQQQVFPGLRPGGPNYIMP----YHLQRQVHPGQRTGVRRSGNTHQMQQPQFMR 498
QQ+F G GP ++P + Q+Q+ PG R G + P F
Sbjct: 178 -------GQQLFYG---QGPPAMIPPQPGFGYQQQLVPGM-----RPGGS---PMPNFFM 219
Query: 499 NSNQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLTSALASASP 558
Q + + Q V ++P VPI L + LA+A+P
Sbjct: 220 PMMQQGQQQQQQQQQQQQQYGGGV-----------HHRDSPASQSVPIGALATQLANAAP 268
Query: 559 DDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQ 618
+ + MLGE LYPLVE +EP A+KVTGMLLEMDQTEVLHL+ESPEALK KV EAM VL+
Sbjct: 269 EQQRTMLGENLYPLVEQLEPESAAKVTGMLLEMDQTEVLHLLESPEALKAKVTEAMDVLR 328
>gi|119612220|gb|EAW91814.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_a [Homo
sapiens]
Length = 287
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/135 (57%), Positives = 101/135 (74%), Gaps = 1/135 (0%)
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
+NG N K YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+DE+L
Sbjct: 1 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 60
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
++ FS FGTITS KVM++ G SKG GF FS PEEAT+A+ EMNG+++ KPLYVA+AQ
Sbjct: 61 RKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 119
Query: 387 RKEERKARLQAQFAQ 401
RKEER+A L Q+ Q
Sbjct: 120 RKEERQAHLTNQYMQ 134
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 78/140 (55%), Gaps = 15/140 (10%)
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKF-------------TNVYVNNLAETVTDED 222
+NG +N KQ+YVG ++ ER Q + KF N+YV NL + + DE
Sbjct: 1 MNGKELNGKQIYVGRAQKKVER-QTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDER 59
Query: 223 LKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRA 282
L+K F FGTITSA VM + G+S+ FGFV F SP+ A AV ++NG K YV A
Sbjct: 60 LRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 118
Query: 283 QKRAEREADLRAKFEQERIS 302
Q++ ER+A L ++ Q S
Sbjct: 119 QRKEERQAHLTNQYMQRMAS 138
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N+++KNLD ID++ L F+ FGT+ S KV ++ G+SKG+GFV F + E A A+ +
Sbjct: 45 NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEM 103
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLA 215
NG ++ K +YV L R++ER TN Y+ +A
Sbjct: 104 NGRIVATKPLYVALAQRKEERQAH-----LTNQYMQRMA 137
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LYV +L+ +++ +L FS + S +V + + S G+ +V +S+P++A
Sbjct: 41 YQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR--SKGFGFVCFSSPEEATK 98
Query: 85 AKEALNFMPINGKPIRIMYSHRD 107
A +N + KP+ + + R
Sbjct: 99 AVTEMNGRIVATKPLYVALAQRK 121
>gi|402466517|gb|EJW01988.1| hypothetical protein EDEG_03560 [Edhazardia aedis USNM 41457]
Length = 571
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 151/254 (59%), Gaps = 7/254 (2%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRS--SLGYAYVNYSNPQDAAN 84
N ++YVGDL ++ L+ LFS V+S+++ + + S SL YAYVNY N A
Sbjct: 5 NRTVYVGDLNPLTLDTDLHRLFSTQGTVLSIKMIHNPNLESTGSLCYAYVNYENSDCALK 64
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIR--KSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + LNF ++G IR+M ++ +++ K G N+ +KNL S DNK L DTF+ FG +
Sbjct: 65 AVQNLNFAELHGTQIRVMLYNKQKNLKGQKIGKYNIIVKNLPVSCDNKTLYDTFSVFGDI 124
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA--QQ 200
+S KVA+DS + KG+GFV ++++ + + AI + +G +N + V F+R+++R +
Sbjct: 125 ISSKVAVDSENKPKGFGFVCYKDKMSVKKAILLAHGTNMNGNMLKVAKFLRKEDRVVEKD 184
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ FTN Y+ N +++E LK+I ++G ITS +V +++D + F F NF+ +A
Sbjct: 185 KIEELFTNCYIKNFG-GLSEEQLKEICANYGEITSFVVPRNADNSLKGFAFCNFKDHVSA 243
Query: 261 AAAVEKLNGTTNND 274
A+E L+ + D
Sbjct: 244 KKAIEDLHDLSIED 257
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 121/239 (50%), Gaps = 16/239 (6%)
Query: 136 FAAFGTVLSCKVAIDSNGQSKG---YGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFV 192
F+ GTVLS K+ + N +S G Y +V +EN + A A++ LN ++ Q+ V L+
Sbjct: 26 FSTQGTVLSIKMIHNPNLESTGSLCYAYVNYENSDCALKAVQNLNFAELHGTQIRVMLYN 85
Query: 193 RRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFV 252
+++ Q + N+ V NL + ++ L F FG I S+ V DS+ K + FGFV
Sbjct: 86 KQKNLKGQKIGK--YNIIVKNLPVSCDNKTLYDTFSVFGDIISSKVAVDSENKPKGFGFV 143
Query: 253 NFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANL 312
++ + A+ +GT N + V + ++ +R E+++I E+L N
Sbjct: 144 CYKDKMSVKKAILLAHGTNMNGNMLKVAKFLRKEDRVV------EKDKI---EEL-FTNC 193
Query: 313 YLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMN 371
Y+KN +++E+LKE+ + +G ITS V + KG F F A +A+ +++
Sbjct: 194 YIKNF-GGLSEEQLKEICANYGEITSFVVPRNADNSLKGFAFCNFKDHVSAKKAIEDLH 251
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 100/222 (45%), Gaps = 48/222 (21%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSR---CFGFVNFQSPDAAAAAVE 265
VYV +L D DL ++F GT+ S ++ + + +S C+ +VN+++ D A AV+
Sbjct: 8 VYVGDLNPLTLDTDLHRLFSTQGTVLSIKMIHNPNLESTGSLCYAYVNYENSDCALKAVQ 67
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK---LKGA-----NLYLKNL 317
LN A+L Q R+ Y K LKG N+ +KNL
Sbjct: 68 NLNF--------------------AELHGT--QIRVMLYNKQKNLKGQKIGKYNIIVKNL 105
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRAL-----NEMNG 372
S +++ L + FS FG I S KV VD KG GF + +A+ MNG
Sbjct: 106 PVSCDNKTLYDTFSVFGDIISSKVAVDSENKPKGFGFVCYKDKMSVKKAILLAHGTNMNG 165
Query: 373 KMIGRKPLYVAVAQRKEER---KARLQAQFAQ--IRAPGGMS 409
M L VA RKE+R K +++ F I+ GG+S
Sbjct: 166 NM-----LKVAKFLRKEDRVVEKDKIEELFTNCYIKNFGGLS 202
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 15/136 (11%)
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLR---AKFEQERISRYEKLKGANLYLKNLD 318
AA E L TT + +Y+ RAQ R ER L+ K +E +S Y++ NLY+ L
Sbjct: 347 AAFENLKITTVEN--FYIQRAQTRQERHEFLKEFIKKAAEENLS-YKR----NLYITTLP 399
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA--AFSMPEEATRALNEMNGKMIG 376
+ +++ + E+FS+ GTIT+ K+ D + G F + PEEA AL N ++
Sbjct: 400 PTASEKDVLEIFSKHGTITNFKLKSD---INTGLKFCYICYKTPEEALIALERGNETILD 456
Query: 377 RKPLYVAVAQRKEERK 392
L V+ + K+ER+
Sbjct: 457 GHKLNVSFFKTKKERQ 472
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 68/123 (55%), Gaps = 4/123 (3%)
Query: 183 DKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
++ ++ F+++ A++N+S K N+Y+ L T +++D+ +IF GTIT+ + D
Sbjct: 370 ERHEFLKEFIKKA--AEENLSYK-RNLYITTLPPTASEKDVLEIFSKHGTITNFKLKSDI 426
Query: 243 DGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
+ + F ++ +++P+ A A+E+ N T + V + + ER+ D AK E ++
Sbjct: 427 NTGLK-FCYICYKTPEEALIALERGNETILDGHKLNVSFFKTKKERQEDKIAKIEPNKLV 485
Query: 303 RYE 305
+ E
Sbjct: 486 QLE 488
>gi|14571650|emb|CAC42811.1| Poly(A)-binding protein cytoplasmic 5 [Cricetulus griseus]
Length = 177
Score = 160 bits (404), Expect = 3e-36, Method: Composition-based stats.
Identities = 80/157 (50%), Positives = 100/157 (63%), Gaps = 1/157 (0%)
Query: 32 VGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNF 91
VGDL V E LY F + R+CRD S LGY YVN+ P DA A +NF
Sbjct: 22 VGDLGPEVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 92 MPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS 151
INGKP R+M+S D +RKSG GN+FIK+LD SIDN+ L F+AFG +LSCKV D
Sbjct: 82 DLINGKPFRLMWSQPDDRLRKSGVGNIFIKHLDKSIDNRTLFYLFSAFGNILSCKVVCDD 141
Query: 152 NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYV 188
NG SKGY +V F++ AA AI +NG+ +N++QVYV
Sbjct: 142 NG-SKGYAYVHFDSLAAANRAIWHMNGVWLNNRQVYV 177
Score = 70.5 bits (171), Expect = 3e-09, Method: Composition-based stats.
Identities = 54/173 (31%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 211 VNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRC-FGFVNFQSPDAAAAAVEKLNG 269
V +L VT++ L K F G + + +D S +G+VNF+ P A A+ +N
Sbjct: 22 VGDLGPEVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 270 TTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKEL 329
N K + + +Q R K N+++K+LD SI++ L L
Sbjct: 82 DLINGKPFRLMWSQPD----------------DRLRKSGVGNIFIKHLDKSIDNRTLFYL 125
Query: 330 FSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
FS FG I SCKV+ D +G SKG + F A RA+ MNG + + +YV
Sbjct: 126 FSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVWLNNRQVYV 177
Score = 53.5 bits (127), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 5/123 (4%)
Query: 157 GYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAE 216
GYG+V F A+ A+ +N LIN K + ++ + +R +++ N+++ +L +
Sbjct: 60 GYGYVNFRFPADAEWALNTMNFDLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKHLDK 115
Query: 217 TVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKV 276
++ + L +F FG I S V+ D +G S+ + +V+F S AA A+ +NG N++
Sbjct: 116 SIDNRTLFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVWLNNRQ 174
Query: 277 WYV 279
YV
Sbjct: 175 VYV 177
>gi|33504434|emb|CAD44189.1| putative poly(A) binding protein [Mangifera indica]
Length = 130
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/124 (65%), Positives = 101/124 (81%), Gaps = 6/124 (4%)
Query: 305 EKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEAT 364
+K +GANLY+KNLD SI+D+KLK+LFS+FG+ITSCKVM D +G S+GSGF AF+ PEEA+
Sbjct: 9 DKFQGANLYMKNLDYSIDDDKLKQLFSQFGSITSCKVMRDPNGISRGSGFVAFTTPEEAS 68
Query: 365 RALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAP 423
RA+ EMNGKM+ KPLYVA+AQRKE R+ARLQAQF+QIR P M+P +AS +P Y P
Sbjct: 69 RAILEMNGKMVVGKPLYVALAQRKEVRRARLQAQFSQIR-PVAMAPSVASRMPMY----P 123
Query: 424 RLGP 427
GP
Sbjct: 124 PCGP 127
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Query: 196 ERAQQNVSPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVN 253
E+A V+ KF N+Y+ NL ++ D+ LK++F FG+ITS VM+D +G SR GFV
Sbjct: 1 EQAWNEVADKFQGANLYMKNLDYSIDDDKLKQLFSQFGSITSCKVMRDPNGISRGSGFVA 60
Query: 254 FQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQER 300
F +P+ A+ A+ ++NG K YV AQ++ R A L+A+F Q R
Sbjct: 61 FTTPEEASRAILEMNGKMVVGKPLYVALAQRKEVRRARLQAQFSQIR 107
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N+++KNLD SID+ L F+ FG++ SCKV D NG S+G GFV F E A AI +
Sbjct: 15 NLYMKNLDYSIDDDKLKQLFSQFGSITSCKVMRDPNGISRGSGFVAFTTPEEASRAILEM 74
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETV 218
NG ++ K +YV L +R+E + + +F+ + +A +V
Sbjct: 75 NGKMVVGKPLYVAL-AQRKEVRRARLQAQFSQIRPVAMAPSV 115
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQ 80
V + +LY+ +L+ ++++ +L LFSQ + S +V RD + S G +V ++ P+
Sbjct: 7 VADKFQGANLYMKNLDYSIDDDKLKQLFSQFGSITSCKVMRDPNGISR-GSGFVAFTTPE 65
Query: 81 DAANAKEALNFMPINGKPIRIMYSHR 106
+A+ A +N + GKP+ + + R
Sbjct: 66 EASRAILEMNGKMVVGKPLYVALAQR 91
>gi|303391122|ref|XP_003073791.1| polyadenylate-binding protein 2 [Encephalitozoon intestinalis ATCC
50506]
gi|303302939|gb|ADM12431.1| polyadenylate-binding protein 2 [Encephalitozoon intestinalis ATCC
50506]
Length = 410
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 158/285 (55%), Gaps = 11/285 (3%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIK- 174
GN+F+KNL + +K L D F+ FG + SCKVA S+G+SKGYGFVQF+ ++AA+ IK
Sbjct: 11 GNIFVKNLPENFTSKDLDDAFSMFGEITSCKVATTSHGKSKGYGFVQFKEKKAAKKVIKN 70
Query: 175 --MLNGMLINDKQVYVGLFVRRQERAQQNVSPK-FTNVYVNNLAETVTDEDLKKIFGHFG 231
LNG+++ + ++ V L+ ++ + +P FTN ++ N V +E+L+++ +G
Sbjct: 71 FNNLNGLMLGENKIVVELYNPEMKKGENKKTPTMFTNCFIKNFPVDVEEENLRELLEKYG 130
Query: 232 TITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN-----GTTNNDKVWYVGRAQKRA 286
+TS DGK + F F NF+S + A A++ L+ G + + +Y+ + Q++
Sbjct: 131 KVTSLFFPTKEDGKPKGFAFANFESHECALNAIKNLHETFPFGDGESGEPFYIQKGQRKE 190
Query: 287 EREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH 346
ER +LR FEQ +S + NLY+ N+ + E+L +F EFG ITS V D
Sbjct: 191 ERAEELRKTFEQ--LSMQGQSYKKNLYITNIPEGFGAEELNNIFREFGNITSMSVGTDGA 248
Query: 347 GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEER 391
K + +S PEEA+ A+ N + L VA + K ER
Sbjct: 249 NSQKQYAYVCYSTPEEASIAVERGNEIYLDGNRLQVAYFKNKLER 293
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 125/273 (45%), Gaps = 32/273 (11%)
Query: 22 PSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQD 81
P GN+ +V +L +N L D FS ++ S +V +S GY +V + +
Sbjct: 7 PPETGNI--FVKNLPENFTSKDLDDAFSMFGEITSCKVATTSHGKSK-GYGFVQFK--EK 61
Query: 82 AANAKEALNFMPINGKPI---RIMYSHRDPSIRK-------SGYGNVFIKNLDTSIDNKA 131
A K NF +NG + +I+ +P ++K + + N FIKN ++ +
Sbjct: 62 KAAKKVIKNFNNLNGLMLGENKIVVELYNPEMKKGENKKTPTMFTNCFIKNFPVDVEEEN 121
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGML-INDKQ----V 186
L + +G V S +G+ KG+ F FE+ E A NAIK L+ D +
Sbjct: 122 LRELLEKYGKVTSLFFPTKEDGKPKGFAFANFESHECALNAIKNLHETFPFGDGESGEPF 181
Query: 187 YVGLFVRRQERAQ-----------QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
Y+ R++ERA+ Q S K N+Y+ N+ E E+L IF FG ITS
Sbjct: 182 YIQKGQRKEERAEELRKTFEQLSMQGQSYK-KNLYITNIPEGFGAEELNNIFREFGNITS 240
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
V D + + +V + +P+ A+ AVE+ N
Sbjct: 241 MSVGTDGANSQKQYAYVCYSTPEEASIAVERGN 273
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 98/220 (44%), Gaps = 18/220 (8%)
Query: 192 VRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGF 251
+R+ ER P+ N++V NL E T +DL F FG ITS V S GKS+ +GF
Sbjct: 1 MRKDERP-----PETGNIFVKNLPENFTSKDLDDAFSMFGEITSCKVATTSHGKSKGYGF 55
Query: 252 VNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGAN 311
V F+ AA ++ NN +G + E K E ++ N
Sbjct: 56 VQFKEKKAAKKVIKNF----NNLNGLMLGENKIVVELYNPEMKKGENKKTPTM----FTN 107
Query: 312 LYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMN 371
++KN + +E L+EL ++G +TS + G KG FA F E A A+ ++
Sbjct: 108 CFIKNFPVDVEEENLRELLEKYGKVTSLFFPTKEDGKPKGFAFANFESHECALNAIKNLH 167
Query: 372 -----GKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPG 406
G +P Y+ QRKEER L+ F Q+ G
Sbjct: 168 ETFPFGDGESGEPFYIQKGQRKEERAEELRKTFEQLSMQG 207
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
+LY+ ++ + +L ++F + + S+ V D + S YAYV YS P++A+ A E
Sbjct: 213 NLYITNIPEGFGAEELNNIFREFGNITSMSVGTDGA-NSQKQYAYVCYSTPEEASIAVER 271
Query: 89 LNFMPINGKPIRIMY 103
N + ++G +++ Y
Sbjct: 272 GNEIYLDGNRLQVAY 286
>gi|300120548|emb|CBK20102.2| unnamed protein product [Blastocystis hominis]
Length = 534
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 180/365 (49%), Gaps = 13/365 (3%)
Query: 44 LYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMY 103
L + F + +V + V D++ + S Y YV++S ++A A E NF + GK +R+M
Sbjct: 5 LEEEFKKYGKVRATHVVLDKNTKQSRCYGYVDFSTAEEAEKALEGANFNILKGKEMRVMR 64
Query: 104 SHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQ 162
+ GN+F+KNL + NK L D F+A+G +LSCKVA D G+S YG+V
Sbjct: 65 QQLRFKQTCNPKGNLFVKNLPDLMTNKELLDKFSAYGNILSCKVAFDKETGKSLHYGYVH 124
Query: 163 FENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDED 222
F + Q + +N ++ + +YV + E+ ++ S + YV N T+T++
Sbjct: 125 FSDPNVTQKVLADMNKDVVEEGAMYVMEY----EKRMKDTSSDWVTCYVANFPTTLTEDG 180
Query: 223 LKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDK-----VW 277
L+ +FG +GTI S + + GFV F + D+A AVE L + V
Sbjct: 181 LRDLFGKYGTINSVYIGYKRYNPQKIQGFVTFANHDSAVKAVEGLKDQVITVEGAEPMVL 240
Query: 278 YVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTIT 337
YV R Q R ER + + E+++ E+ KG LY+ D +I E+L+E+F +G I
Sbjct: 241 YVNRLQSREERASINQKILEEKKKEEVERTKGRFLYVGFGDQTITLERLREIFQAYGNIE 300
Query: 338 SCKVMVDQHGFS-KGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQ 396
SC + D++ K GF E A A+ + L V +AQ +EER L+
Sbjct: 301 SCSIARDKNTKELKPFGFVCMDTTENAQNAIRAFRESHDLK--LKVELAQTREERAKMLK 358
Query: 397 AQFAQ 401
+ Q
Sbjct: 359 ERRKQ 363
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 124/288 (43%), Gaps = 20/288 (6%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
+L+V +L + +L D FS ++S +V D+ SL Y YV++S+P
Sbjct: 78 NLFVKNLPDLMTNKELLDKFSAYGNILSCKVAFDKETGKSLHYGYVHFSDPNVTQKVLAD 137
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+N + + +M + S + ++ N T++ L D F +GT+ S +
Sbjct: 138 MNKDVVEEGAMYVMEYEKRMKDTSSDWVTCYVANFPTTLTEDGLRDLFGKYGTINSVYIG 197
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDK-----QVYVGLFVRRQERAQQNVS 203
K GFV F N ++A A++ L +I + +YV R+ERA N
Sbjct: 198 YKRYNPQKIQGFVTFANHDSAVKAVEGLKDQVITVEGAEPMVLYVNRLQSREERASINQK 257
Query: 204 PKFTN------------VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKS-RCFG 250
+YV +T+T E L++IF +G I S + +D + K + FG
Sbjct: 258 ILEEKKKEEVERTKGRFLYVGFGDQTITLERLREIFQAYGNIESCSIARDKNTKELKPFG 317
Query: 251 FVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
FV + + A A+ + +D V AQ R ER L+ + +Q
Sbjct: 318 FVCMDTTENAQNAIRAFRES--HDLKLKVELAQTREERAKMLKERRKQ 363
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 25/194 (12%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
V+ YV + + E L DLF + + SV + + + +V ++N A A E
Sbjct: 165 VTCYVANFPTTLTEDGLRDLFGKYGTINSVYIGYKRYNPQKIQ-GFVTFANHDSAVKAVE 223
Query: 88 ALN--FMPINGKPIRIMYSHRDPSIRKSGYGN-------------------VFIKNLDTS 126
L + + G ++Y +R S + N +++ D +
Sbjct: 224 GLKDQVITVEGAEPMVLYVNRLQSREERASINQKILEEKKKEEVERTKGRFLYVGFGDQT 283
Query: 127 IDNKALCDTFAAFGTVLSCKVAIDSNGQS-KGYGFVQFENEEAAQNAIKMLNGMLINDKQ 185
I + L + F A+G + SC +A D N + K +GFV + E AQNAI+ +D +
Sbjct: 284 ITLERLREIFQAYGNIESCSIARDKNTKELKPFGFVCMDTTENAQNAIRAFRES--HDLK 341
Query: 186 VYVGLFVRRQERAQ 199
+ V L R+ERA+
Sbjct: 342 LKVELAQTREERAK 355
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 39/68 (57%)
Query: 553 LASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAE 612
+ + + ++R GE+++ L++ I SK+TGM+LE+ +++ +I P L K+ E
Sbjct: 464 IDAMTNEERRNTFGERIFYLIKTIGDPRCSKITGMMLELPVDDLMKIISDPGELLKKIDE 523
Query: 613 AMAVLQEA 620
A VL +
Sbjct: 524 ANDVLDQT 531
>gi|365760899|gb|EHN02583.1| Pes4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 598
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 182/389 (46%), Gaps = 59/389 (15%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
+ L++GDL + V E L +F + VS +VC D + SLG+ Y+N+ + ++A A E
Sbjct: 78 IPLFIGDLHETVTEETLKGIFGKFPSFVSAKVCLDSITKKSLGHGYLNFEDKEEAERAME 137
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTS---IDNKALCDTFAAFGTVLS 144
LN+ +NG+ IRIM S R+ + RK+ NVF NL + + + DTF+ +G +LS
Sbjct: 138 ELNYTDVNGREIRIMPSLRNTTFRKNFGTNVFFSNLPLNNPLLTTRVFYDTFSRYGKILS 197
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER------- 197
CK +DS K GFV FENE+ A+N IKM N K++ G+ ++ R
Sbjct: 198 CK--LDS---RKDIGFVYFENEKTARNVIKMYNNTSFFGKKILCGIHFDKEVRSVPNFET 252
Query: 198 ----------------------------AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGH 229
++ N S ++++ NL T +D+ F
Sbjct: 253 QKSRLDAETIIEKEQALNATQLKRNDGASKNNQSSSQNSIFIKNLPIITTRDDVLNFFSE 312
Query: 230 FGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAERE 289
G I S I + ++ + FV ++S + + A+++ N K V RAQ + E
Sbjct: 313 VGPIKS-IYLSNATKVKYLWAFVTYKSNEDSEKAIKRYNNFYFRGKKLLVSRAQDKEE-- 369
Query: 290 ADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFS 349
RAKF E K + L+L+NL N E LK L + I K+ +D + S
Sbjct: 370 ---RAKF-------IESQKMSTLFLENLSAVCNKEFLKYLCHQ-ENIRPFKIQIDGYNES 418
Query: 350 KG--SGFAAFSMPEEATRALNEMNGKMIG 376
SG F E+ATR N +N +++G
Sbjct: 419 SATYSGHIKFRNFEDATRIFNFLNNRLVG 447
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 88/210 (41%), Gaps = 37/210 (17%)
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAA 261
S K +++ +L ETVT+E LK IFG F + SA V DS KS G++NF+ + A
Sbjct: 74 SKKLIPLFIGDLHETVTEETLKGIFGKFPSFVSAKVCLDSITKKSLGHGYLNFEDKEEAE 133
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKR--AEREADLRAKFEQERISRYEKLKGANLYLKNL-- 317
A+E+LN T N GR + + R R F G N++ NL
Sbjct: 134 RAMEELNYTDVN------GREIRIMPSLRNTTFRKNF------------GTNVFFSNLPL 175
Query: 318 -DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
+ + + FS +G I SCK+ K GF F + A + N
Sbjct: 176 NNPLLTTRVFYDTFSRYGKILSCKL-----DSRKDIGFVYFENEKTARNVIKMYNNTSFF 230
Query: 377 RKPLYVAVAQRKEER--------KARLQAQ 398
K + + KE R K+RL A+
Sbjct: 231 GKKILCGIHFDKEVRSVPNFETQKSRLDAE 260
>gi|167534320|ref|XP_001748838.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772800|gb|EDQ86448.1| predicted protein [Monosiga brevicollis MX1]
Length = 514
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 177/369 (47%), Gaps = 14/369 (3%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ SL + L + ESQL +LF + S+ + RD LG+ YVN+ + A A
Sbjct: 10 SASLRIDHLPETATESQLAELFGAIGDFKSIHIIRDSISNKPLGHGYVNFEDVDSAIEAI 69
Query: 87 EALNFMPING----KPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
+ L+ M + G K I + ++ P+ + G +F+KNL +DNK + DTFA+ G
Sbjct: 70 KVLDGMDLTGGNDDKGISLSFTPSQPASSAASSGTLFVKNLAEDVDNKTIFDTFASIGAP 129
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNV 202
S KV + G+S+G+ V +++ + AQ A+ L G+++N K + + R Q AQ
Sbjct: 130 SSAKVMTTAEGKSRGFAIVHYDDPQLAQRALDELEGVVVNGKNIRLE---RYQTGAQLKE 186
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSA-IVMKDSDGKSRCFGFVNFQSPDAAA 261
+ VY+ L VTD+ L + FG++ S + KD D FV + A
Sbjct: 187 ESRKRTVYLAGLPHEVTDKQLIDLLSPFGSVISVKLYPKDKDRNP--VAFVTMEDEQAVL 244
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AVEKLNG + + V AQ +A A + R + E+ K A LY++N+ + +
Sbjct: 245 RAVEKLNGGSFERQRITV--AQLQARNPATQSSGPTSAR--QVEETKDATLYVRNIYEDV 300
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
D L E F FG ++ + +G ++G F F PE+ AL N +G +
Sbjct: 301 QDSDLSEAFGVFGPVSRVTIPRSANGDTRGFAFVVFENPEDRAHALAAGNMLEVGGGKVQ 360
Query: 382 VAVAQRKEE 390
+ + KEE
Sbjct: 361 YSAYRTKEE 369
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 198 AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQS 256
A +V+ ++ +++L ET T+ L ++FG G S +++DS K G+VNF+
Sbjct: 2 ATSDVNEPSASLRIDHLPETATESQLAELFGAIGDFKSIHIIRDSISNKPLGHGYVNFED 61
Query: 257 PDAAAAAVEKLNG---TTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLY 313
D+A A++ L+G T ND + + F + + G L+
Sbjct: 62 VDSAIEAIKVLDGMDLTGGND--------------DKGISLSFTPSQPASSAASSG-TLF 106
Query: 314 LKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGK 373
+KNL + ++++ + + F+ G +S KVM G S+G + P+ A RAL+E+ G
Sbjct: 107 VKNLAEDVDNKTIFDTFASIGAPSSAKVMTTAEGKSRGFAIVHYDDPQLAQRALDELEGV 166
Query: 374 MIGRKPL----YVAVAQRKEERKAR 394
++ K + Y AQ KEE + R
Sbjct: 167 VVNGKNIRLERYQTGAQLKEESRKR 191
>gi|331224641|ref|XP_003324992.1| hypothetical protein PGTG_06529 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309303982|gb|EFP80573.1| hypothetical protein PGTG_06529 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 306
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/270 (38%), Positives = 140/270 (51%), Gaps = 18/270 (6%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRV-CRDQSKRSSLGYAYVNYSNPQDAANAKE 87
S+YVGDL + E QL +FSQ + V +R+ ++ R YAYV YS+ A A
Sbjct: 29 SVYVGDLPPEITEEQLTQVFSQASPVEKIRIKLPKRNTRFRRAYAYVTYSSADAATAAIR 88
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYG----NVFIKNLDTSIDNKALCDTFAAFGTVL 143
N GKP R+M SI + G NVF+K+L + A DTFA FG VL
Sbjct: 89 EFNQTEFLGKPCRVM-----KSIHGAAKGLSEANVFVKHLPAKLSAIAFHDTFADFGEVL 143
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIN----DKQVYVGLFVRRQERAQ 199
S K+AID KGYGFVQ+ E AQ AI+ NG ++ K + LF++++ R
Sbjct: 144 SSKLAIDHLNVPKGYGFVQYATAEQAQKAIRETNGSTLDVEGATKPIKTSLFIKKENRI- 202
Query: 200 QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDA 259
VS +F NV+ NL+ +T E K+ + +G ITSA + DGK GF NF+ P A
Sbjct: 203 --VSREFKNVFFRNLSTKITLEKFKQTWSKYGVITSAFLSLGKDGKPTGTGFANFEKPSA 260
Query: 260 AAAAVEKLNGTTNNDKVWYVGRAQKRAERE 289
AA V+ +V V RA R+ERE
Sbjct: 261 AAKVVKVTQKKKAPGRVHAV-RALTRSERE 289
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 131/292 (44%), Gaps = 20/292 (6%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQS--KGYGFVQFENEEAAQNAIK 174
+V++ +L I + L F+ V ++ + + Y +V + + +AA AI+
Sbjct: 29 SVYVGDLPPEITEEQLTQVFSQASPVEKIRIKLPKRNTRFRRAYAYVTYSSADAATAAIR 88
Query: 175 MLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTIT 234
N K V ++ A + +S NV+V +L ++ F FG +
Sbjct: 89 EFNQTEFLGKPCRV---MKSIHGAAKGLSE--ANVFVKHLPAKLSAIAFHDTFADFGEVL 143
Query: 235 SAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRA 294
S+ + D + +GFV + + + A A+ + NG+T + V A K + L
Sbjct: 144 SSKLAIDHLNVPKGYGFVQYATAEQAQKAIRETNGSTLD-----VEGATKPIK--TSLFI 196
Query: 295 KFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGF 354
K E +SR K N++ +NL I EK K+ +S++G ITS + + + G G+GF
Sbjct: 197 KKENRIVSREFK----NVFFRNLSTKITLEKFKQTWSKYGVITSAFLSLGKDGKPTGTGF 252
Query: 355 AAFSMPEEATRALNEMNGKMI-GRKPLYVAVAQRKEER-KARLQAQFAQIRA 404
A F P A + + K GR A+ + + ER K+R AQ +++ A
Sbjct: 253 ANFEKPSAAAKVVKVTQKKKAPGRVHAVRALTRSERERYKSRKAAQASEVAA 304
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 23/195 (11%)
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVM--KDSDGKSRCFGFVNFQSPDAA 260
+P +VYV +L +T+E L ++F + + K + R + +V + S DAA
Sbjct: 24 TPAEYSVYVGDLPPEITEEQLTQVFSQASPVEKIRIKLPKRNTRFRRAYAYVTYSSADAA 83
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
AA+ + N T K V ++ A + L AN+++K+L
Sbjct: 84 TAAIREFNQTEFLGKPCRVMKSIHGAAK-----------------GLSEANVFVKHLPAK 126
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI----G 376
++ + F++FG + S K+ +D KG GF ++ E+A +A+ E NG +
Sbjct: 127 LSAIAFHDTFADFGEVLSSKLAIDHLNVPKGYGFVQYATAEQAQKAIRETNGSTLDVEGA 186
Query: 377 RKPLYVAVAQRKEER 391
KP+ ++ +KE R
Sbjct: 187 TKPIKTSLFIKKENR 201
>gi|269859758|ref|XP_002649603.1| poly(A)-binding protein [Enterocytozoon bieneusi H348]
gi|220066966|gb|EED44435.1| poly(A)-binding protein [Enterocytozoon bieneusi H348]
Length = 484
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 195/376 (51%), Gaps = 24/376 (6%)
Query: 30 LYVGDLEQNVNESQLYDLFS--QVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++VGD+ N ++L ++F V ++ + Q +A+V + + A A +
Sbjct: 23 IHVGDISLNTTANELKEVFKGLNVTNIIMKKTLNGQ-----YAFAFVKFDSANAAQEAVQ 77
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
N+ +NGK I + S D + S N+F+ N+ T + K L + F FG VLSCK+
Sbjct: 78 KYNYTMLNGKEILLTIS--DTQFKYSQSANIFVNNIPTDMSAKDLEEIFKNFGPVLSCKI 135
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFT 207
+ S G+SKGYG+V ++N ++A+ A+ + IN+ ++V F Q+ A+ + + FT
Sbjct: 136 SRTSEGKSKGYGYVMYKNLKSAKKAVTNCQNVKINENILFVD-FYNPQKSARNSENKAFT 194
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
N + N T+ +LK + +G IT+ SDGK F VN+ P++A A+++L
Sbjct: 195 NCFCKNFPPNYTEAELKNLLKKYGEITTIYFPTKSDGKPVGFACVNYAHPESAVRAIDEL 254
Query: 268 NGTT--NNDKV----------WYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLK 315
+ NN+++ +Y+ + +K+ ERE L++ F + KLK NL+++
Sbjct: 255 HNKQIFNNNQMQKDTKFAIEPFYIQKNEKKKEREQILKS-FYGNSVGFRNKLK-RNLFIQ 312
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI 375
N+ S ++++L E+ +FG IT K+ +D K G+ +S EEA AL + ++
Sbjct: 313 NVPTSFSEDELLEILKKFGNITDFKLKLDTLHPEKQFGYVCYSTIEEAAVALEKSKQVLL 372
Query: 376 GRKPLYVAVAQRKEER 391
L +++ + K ER
Sbjct: 373 DGNQLELSIYKSKYER 388
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 27/189 (14%)
Query: 38 NVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL-------- 89
N E++L +L + ++ ++ +S +G+A VNY++P+ A A + L
Sbjct: 204 NYTEAELKNLLKKYGEITTIYF-PTKSDGKPVGFACVNYAHPESAVRAIDELHNKQIFNN 262
Query: 90 NFMPINGK----PIRIMYSHRDPS---IRKSGYGN-----------VFIKNLDTSIDNKA 131
N M + K P I + + I KS YGN +FI+N+ TS
Sbjct: 263 NQMQKDTKFAIEPFYIQKNEKKKEREQILKSFYGNSVGFRNKLKRNLFIQNVPTSFSEDE 322
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
L + FG + K+ +D+ K +G+V + E A A++ +L++ Q+ + ++
Sbjct: 323 LLEILKKFGNITDFKLKLDTLHPEKQFGYVCYSTIEEAAVALEKSKQVLLDGNQLELSIY 382
Query: 192 VRRQERAQQ 200
+ ER+ +
Sbjct: 383 KSKYERSTE 391
>gi|242077714|ref|XP_002448793.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
gi|241939976|gb|EES13121.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
Length = 1076
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 180/382 (47%), Gaps = 43/382 (11%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
L+VG+L ++ +L +LF ++V RV D SS GY +V YS+P+ AA A + +
Sbjct: 231 LFVGNLPPSLASHKLIELFLPFGRIVKSRVVDDCFTGSSKGYGFVQYSDPRYAAEAIKHM 290
Query: 90 NFMPINGK--PIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
N + G+ +R+ + S ++ +++ NL + L D F +G V S KV
Sbjct: 291 NGRMVEGRMLEVRLAGAPSSGSTKEMDMSKLYVCNLPLLLHEDKLHDLFVPYGQVTSVKV 350
Query: 148 AID-SNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP-- 204
D + G SKGYGFV++ + + A +AI LNG LI K++ V + + +V
Sbjct: 351 MRDHATGLSKGYGFVRYSDPQHAAHAIFQLNGHLIEGKKMEVRVAAVSSSGSNTSVQAIS 410
Query: 205 ----------KFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-SDGKSRCFGFVN 253
+NVYV NL + + L +F +G +TSA V D + G S+ +GFV
Sbjct: 411 ETDHQLTKEVDMSNVYVQNLPLLMNTDKLLNLFLPYGKVTSAKVAMDYTSGISKGYGFVK 470
Query: 254 FQSPDAAAAAVEKLNGTTNNDKVWYV----------GRAQKRAEREADLRAKFEQERISR 303
F P AA AV +LNG + V A R +E D+
Sbjct: 471 FSDPHDAAHAVIELNGCLVEGRKILVRVRPPSSPVESHANNRTLKEIDM----------- 519
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEA 363
+NLY+ N+ S+N KL ELF FG IT V+ + SKG GF F+ A
Sbjct: 520 ------SNLYVCNIPSSMNKAKLVELFLPFGRITHAMVVEQSNNSSKGYGFVKFADSHCA 573
Query: 364 TRALNEMNGKMIGRKPLYVAVA 385
A+ MNG +I + + V VA
Sbjct: 574 AEAVAMMNGALIEGETISVRVA 595
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 180/375 (48%), Gaps = 29/375 (7%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
LYV +L ++E +L+DLF QV SV+V RD + S GY +V YS+PQ AA+A L
Sbjct: 321 LYVCNLPLLLHEDKLHDLFVPYGQVTSVKVMRDHATGLSKGYGFVRYSDPQHAAHAIFQL 380
Query: 90 NFMPINGKPIRI---------------MYSHRDPSIRKS-GYGNVFIKNLDTSIDNKALC 133
N I GK + + S D + K NV+++NL ++ L
Sbjct: 381 NGHLIEGKKMEVRVAAVSSSGSNTSVQAISETDHQLTKEVDMSNVYVQNLPLLMNTDKLL 440
Query: 134 DTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF- 191
+ F +G V S KVA+D ++G SKGYGFV+F + A +A+ LNG L+ +++ V +
Sbjct: 441 NLFLPYGKVTSAKVAMDYTSGISKGYGFVKFSDPHDAAHAVIELNGCLVEGRKILVRVRP 500
Query: 192 ----VRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSR 247
V + +N+YV N+ ++ L ++F FG IT A+V++ S+ S+
Sbjct: 501 PSSPVESHANNRTLKEIDMSNLYVCNIPSSMNKAKLVELFLPFGRITHAMVVEQSNNSSK 560
Query: 248 CFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKL 307
+GFV F AA AV +NG + V A + + I+ ++
Sbjct: 561 GYGFVKFADSHCAAEAVAMMNGALIEGETISVRVAGLSPSVSSSVSQHSPHSEINASPEI 620
Query: 308 KGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRAL 367
LY+ NL +++ +KL LF FG I VM ++ F ++ A +AL
Sbjct: 621 NNCRLYVTNLPQTMSADKLVSLFMPFGQIDRV-VMYAEY------SFVLYADINSAAKAL 673
Query: 368 NEMNGKMIGRKPLYV 382
M+G +I K L V
Sbjct: 674 KHMDGYLIEGKRLVV 688
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 146/281 (51%), Gaps = 6/281 (2%)
Query: 104 SHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQ 162
+H + +++ N+F+ NL S+ + L + F FG ++ +V D G SKGYGFVQ
Sbjct: 217 AHDEGKLKEGNGTNLFVGNLPPSLASHKLIELFLPFGRIVKSRVVDDCFTGSSKGYGFVQ 276
Query: 163 FENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDED 222
+ + A AIK +NG ++ + + V L + + + + +YV NL + ++
Sbjct: 277 YSDPRYAAEAIKHMNGRMVEGRMLEVRLAGAPSSGSTKEMD--MSKLYVCNLPLLLHEDK 334
Query: 223 LKKIFGHFGTITSAIVMKD-SDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGR 281
L +F +G +TS VM+D + G S+ +GFV + P AA A+ +LNG K V
Sbjct: 335 LHDLFVPYGQVTSVKVMRDHATGLSKGYGFVRYSDPQHAAHAIFQLNGHLIEGKKMEVRV 394
Query: 282 AQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKV 341
A + + +++ +N+Y++NL +N +KL LF +G +TS KV
Sbjct: 395 AAVSSSGSNTSVQAISETDHQLTKEVDMSNVYVQNLPLLMNTDKLLNLFLPYGKVTSAKV 454
Query: 342 MVD-QHGFSKGSGFAAFSMPEEATRALNEMNGKMI-GRKPL 380
+D G SKG GF FS P +A A+ E+NG ++ GRK L
Sbjct: 455 AMDYTSGISKGYGFVKFSDPHDAAHAVIELNGCLVEGRKIL 495
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 179/377 (47%), Gaps = 36/377 (9%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
+YV +L +N +L +LF +V S +V D + S GY +V +S+P DAA+A L
Sbjct: 425 VYVQNLPLLMNTDKLLNLFLPYGKVTSAKVAMDYTSGISKGYGFVKFSDPHDAAHAVIEL 484
Query: 90 NFMPINGKPIRI--------MYSH-RDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFG 140
N + G+ I + + SH + ++++ N+++ N+ +S++ L + F FG
Sbjct: 485 NGCLVEGRKILVRVRPPSSPVESHANNRTLKEIDMSNLYVCNIPSSMNKAKLVELFLPFG 544
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYV---GL------- 190
+ V SN SKGYGFV+F + A A+ M+NG LI + + V GL
Sbjct: 545 RITHAMVVEQSNNSSKGYGFVKFADSHCAAEAVAMMNGALIEGETISVRVAGLSPSVSSS 604
Query: 191 FVRRQERAQQNVSPKFTN--VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRC 248
+ ++ N SP+ N +YV NL +T++ + L +F FG I ++ +
Sbjct: 605 VSQHSPHSEINASPEINNCRLYVTNLPQTMSADKLVSLFMPFGQIDRVVMYAE------- 657
Query: 249 FGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLK 308
+ FV + ++AA A++ ++G K V ++ A ++ Q +++
Sbjct: 658 YSFVLYADINSAAKALKHMDGYLIEGKRLVVKGSEPLPANAA--QSACSQSGSKLVKEID 715
Query: 309 GANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALN 368
ANLY+ + ++ E+L ++F +G I K F G G ++ A A++
Sbjct: 716 MANLYVGRVPSAVTCEQLVQIFCLYGEIVQAK------KFDAGYGMIRYANASSAAAAID 769
Query: 369 EMNGKMIGRKPLYVAVA 385
++G IG L V VA
Sbjct: 770 HLDGYQIGGSTLVVRVA 786
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 187/453 (41%), Gaps = 56/453 (12%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
LYV ++ ++N+++L +LF ++ V +QS SS GY +V +++ AA A +
Sbjct: 522 LYVCNIPSSMNKAKLVELFLPFGRITHAMVV-EQSNNSSKGYGFVKFADSHCAAEAVAMM 580
Query: 90 NFMPINGKPIRIMYS-------------------HRDPSIRKSGYGNVFIKNLDTSIDNK 130
N I G+ I + + + P I +++ NL ++
Sbjct: 581 NGALIEGETISVRVAGLSPSVSSSVSQHSPHSEINASPEINNC---RLYVTNLPQTMSAD 637
Query: 131 ALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL 190
L F FG ID Y FV + + +A A+K ++G LI K++ V
Sbjct: 638 KLVSLFMPFGQ-------IDRVVMYAEYSFVLYADINSAAKALKHMDGYLIEGKRLVVKG 690
Query: 191 FVRRQERAQQNVSPK----------FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMK 240
A Q+ + N+YV + VT E L +IF +G I A K
Sbjct: 691 SEPLPANAAQSACSQSGSKLVKEIDMANLYVGRVPSAVTCEQLVQIFCLYGEIVQA---K 747
Query: 241 DSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQER 300
D +G + + + +AAAA++ L+G V A AE + A+ Q
Sbjct: 748 KFDAG---YGMIRYANASSAAAAIDHLDGYQIGGSTLVVRVAGLPAESDVATFARTPQTP 804
Query: 301 ISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH-GFSKGSGFAAFSM 359
+ + ++ NLY+ L + +KL ELF G IT KV+VD+ G SKG GF F+
Sbjct: 805 GNEHRQIDMTNLYVGYLPPYVTTDKLIELFLPCGQITQAKVVVDKFTGVSKGFGFVRFAD 864
Query: 360 PEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIP--- 416
A A+ MNG + L V A + A A F S +A GIP
Sbjct: 865 AYSAATAITHMNGYPLDGHMLAVRTAGVQPSDMASYMAHFYSYFTSTDPSRMAVGIPTSD 924
Query: 417 -GYHHGAPRLGPQQLYYGQG---TPGLMPPQAA 445
Y++G P YY + TP + Q A
Sbjct: 925 WSYYYGQSAYNP--YYYAESAYTTPAVHQGQGA 955
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 248 CFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKL 307
C+ + + AAA VEK ++D+ ++ + Q+ + A K ++
Sbjct: 179 CY---TYSTESFAAATVEK-RKVQSDDQDKHLCKRQELSFSSAHDEGKLKEGN------- 227
Query: 308 KGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH-GFSKGSGFAAFSMPEEATRA 366
G NL++ NL S+ KL ELF FG I +V+ D G SKG GF +S P A A
Sbjct: 228 -GTNLFVGNLPPSLASHKLIELFLPFGRIVKSRVVDDCFTGSSKGYGFVQYSDPRYAAEA 286
Query: 367 LNEMNGKMIGRKPLYVAVA 385
+ MNG+M+ + L V +A
Sbjct: 287 IKHMNGRMVEGRMLEVRLA 305
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 16 ATTAAVPSGYGN-------VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSS 68
AT A P GN +LYVG L V +L +LF Q+ +V D+ S
Sbjct: 795 ATFARTPQTPGNEHRQIDMTNLYVGYLPPYVTTDKLIELFLPCGQITQAKVVVDKFTGVS 854
Query: 69 LGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPS 109
G+ +V +++ AA A +N P++G + + + PS
Sbjct: 855 KGFGFVRFADAYSAATAITHMNGYPLDGHMLAVRTAGVQPS 895
>gi|429963232|gb|ELA42776.1| hypothetical protein VICG_00091 [Vittaforma corneae ATCC 50505]
Length = 528
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 199/391 (50%), Gaps = 40/391 (10%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQV-AQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
V++ G+L + ++L LFS+ + +++ ++ +SS YA+V + + +DA
Sbjct: 51 VTVRCGNLSPKTSIAELVALFSREPVAIEDIKMKKNDLIQSS--YAFVTFLSIEDAKRIV 108
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGY-----GNVFIKNLDTSIDNKALCDTFAAFGT 141
E N+ ++ + + +M I SG N+F+KN+ K L + F FG+
Sbjct: 109 EKYNYTTLHDREMTLM-------ILTSGNVFPENANLFVKNIPKEYTTKKLYEIFKDFGS 161
Query: 142 VLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVR----RQER 197
+ SCKV++DSNG+S+GYGFVQ+E E+A AI L K + + F R ++
Sbjct: 162 IASCKVSVDSNGESRGYGFVQYETVESADKAIADLRDEKFEGKTLSISRFDRSLRDQKHS 221
Query: 198 AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ + FTNV+V N ++T+ LK I +G I S + + + F VNF+
Sbjct: 222 DSSSSTSSFTNVFVKNFPSSLTEAKLKDILEKYGPICSIYLPLNEKSEPVGFACVNFEKA 281
Query: 258 DAAAAAVEKLNGT-------TNNDKV----WYVGRAQKRAEREADLRAKFEQERISRYEK 306
+ AA AVE L+ + V +Y+ +A++R ERE +R + E
Sbjct: 282 EDAAKAVENLHNKHIFSLEECQDSSVATCPFYIQKAERRKEREETIRKQLEA------LS 335
Query: 307 LKGA----NLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEE 362
LKG NLY+ ++ ++ +++++++LFS+FGTI S K+ +K G+ F PEE
Sbjct: 336 LKGINSKNNLYIAHIPETFSEDEIRDLFSKFGTIVSIKLQKTSSENNKQFGYICFKTPEE 395
Query: 363 ATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
A A M+G ++ L ++ + K ER+A
Sbjct: 396 AAAAFEAMDGTLLDNSKLRISFYKAKNERRA 426
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 143/297 (48%), Gaps = 40/297 (13%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
N +L+V ++ + +LY++F + S +V D S S GY +V Y + A A
Sbjct: 135 NANLFVKNIPKEYTTKKLYEIFKDFGSIASCKVSVD-SNGESRGYGFVQYETVESADKAI 193
Query: 87 EALNFMPINGKPIRIMYSHRDPSIR----------KSGYGNVFIKNLDTSIDNKALCDTF 136
L GK + I S D S+R S + NVF+KN +S+ L D
Sbjct: 194 ADLRDEKFEGKTLSI--SRFDRSLRDQKHSDSSSSTSSFTNVFVKNFPSSLTEAKLKDIL 251
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLI------NDKQV---- 186
+G + S + ++ + G+ V FE E A A++ L+ I D V
Sbjct: 252 EKYGPICSIYLPLNEKSEPVGFACVNFEKAEDAAKAVENLHNKHIFSLEECQDSSVATCP 311
Query: 187 -YVGLFVRRQERAQ-----------QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTIT 234
Y+ RR+ER + + ++ K N+Y+ ++ ET ++++++ +F FGTI
Sbjct: 312 FYIQKAERRKEREETIRKQLEALSLKGINSK-NNLYIAHIPETFSEDEIRDLFSKFGTIV 370
Query: 235 SAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGT-TNNDKV---WYVGRAQKRAE 287
S + K S ++ FG++ F++P+ AAAA E ++GT +N K+ +Y + ++RAE
Sbjct: 371 SIKLQKTSSENNKQFGYICFKTPEEAAAAFEAMDGTLLDNSKLRISFYKAKNERRAE 427
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 126/263 (47%), Gaps = 29/263 (11%)
Query: 157 GYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAE 216
Y FV F + E A+ ++ N ++D+++ + + NV P+ N++V N+ +
Sbjct: 92 SYAFVTFLSIEDAKRIVEKYNYTTLHDREMTLMIL------TSGNVFPENANLFVKNIPK 145
Query: 217 TVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKV 276
T + L +IF FG+I S V DS+G+SR +GFV +++ ++A A+ L K
Sbjct: 146 EYTTKKLYEIFKDFGSIASCKVSVDSNGESRGYGFVQYETVESADKAIADLRDEKFEGKT 205
Query: 277 WYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTI 336
+ R R+ R+ ++ S N+++KN S+ + KLK++ ++G I
Sbjct: 206 LSISRFD-RSLRD-------QKHSDSSSSTSSFTNVFVKNFPSSLTEAKLKDILEKYGPI 257
Query: 337 TSCKVMVDQHGFSKGSGFAA--FSMPEEATRALNEMNGKMI-----------GRKPLYVA 383
C + + + S+ GFA F E+A +A+ ++ K I P Y+
Sbjct: 258 --CSIYLPLNEKSEPVGFACVNFEKAEDAAKAVENLHNKHIFSLEECQDSSVATCPFYIQ 315
Query: 384 VAQRKEERKARLQAQFAQIRAPG 406
A+R++ER+ ++ Q + G
Sbjct: 316 KAERRKEREETIRKQLEALSLKG 338
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 97/201 (48%), Gaps = 26/201 (12%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
++V + ++ E++L D+ + + S+ + ++ K +G+A VN+ +DAA A E L
Sbjct: 233 VFVKNFPSSLTEAKLKDILEKYGPICSIYLPLNE-KSEPVGFACVNFEKAEDAAKAVENL 291
Query: 90 NFMPING-----------KPIRIMYSHR----DPSIRK----------SGYGNVFIKNLD 124
+ I P I + R + +IRK + N++I ++
Sbjct: 292 HNKHIFSLEECQDSSVATCPFYIQKAERRKEREETIRKQLEALSLKGINSKNNLYIAHIP 351
Query: 125 TSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDK 184
+ + D F+ FGT++S K+ S+ +K +G++ F+ E A A + ++G L+++
Sbjct: 352 ETFSEDEIRDLFSKFGTIVSIKLQKTSSENNKQFGYICFKTPEEAAAAFEAMDGTLLDNS 411
Query: 185 QVYVGLFVRRQERAQQNVSPK 205
++ + + + ER ++ S K
Sbjct: 412 KLRISFYKAKNERRAESTSGK 432
>gi|405946351|gb|EKC17616.1| Polyadenylate-binding protein 4 [Crassostrea gigas]
Length = 199
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 108/149 (72%)
Query: 253 NFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANL 312
+F+ P+AA AVE LNG N K+ YV QK ER+A+L+ KF++ R+ R + +G NL
Sbjct: 3 SFEDPEAAEKAVEALNGNDNAGKIIYVRCDQKEIERQAELKEKFQRIRMERINRYQGVNL 62
Query: 313 YLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNG 372
Y+KNL D+I+D +L++ F++FGTITS KVM + G SKG GF F PEEA +A+ EMN
Sbjct: 63 YVKNLADNIDDVRLRKEFAQFGTITSAKVMTTEDGRSKGFGFVCFRSPEEAAKAIVEMNE 122
Query: 373 KMIGRKPLYVAVAQRKEERKARLQAQFAQ 401
K+I +PLYVA+AQ+K++RKA+L +Q+ Q
Sbjct: 123 KLIEARPLYVALAQKKQDRKAQLASQYMQ 151
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 117/197 (59%), Gaps = 18/197 (9%)
Query: 163 FENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF-------------TNV 209
FE+ EAA+ A++ LNG K +YV + ER Q + KF N+
Sbjct: 4 FEDPEAAEKAVEALNGNDNAGKIIYVRCDQKEIER-QAELKEKFQRIRMERINRYQGVNL 62
Query: 210 YVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNG 269
YV NLA+ + D L+K F FGTITSA VM DG+S+ FGFV F+SP+ AA A+ ++N
Sbjct: 63 YVKNLADNIDDVRLRKEFAQFGTITSAKVMTTEDGRSKGFGFVCFRSPEEAAKAIVEMNE 122
Query: 270 TTNNDKVWYVGRAQKRAEREADLRAKFEQERISR----YEKLKGANLYLKNLDDSINDEK 325
+ YV AQK+ +R+A L +++ Q SR + G NL++KNLD SI+DEK
Sbjct: 123 KLIEARPLYVALAQKKQDRKAQLASQYMQRTSSRDMPEHRIGPGVNLFIKNLDKSIDDEK 182
Query: 326 LKELFSEFGTITSCKVM 342
L+E FS+FGTITS KV+
Sbjct: 183 LREEFSQFGTITSAKVV 199
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 96/197 (48%), Gaps = 32/197 (16%)
Query: 75 NYSNPQDAANAKEALNFMPINGKPIRIMYSHRD----------------PSIRKSGYGNV 118
++ +P+ A A EALN GK I + ++ I + N+
Sbjct: 3 SFEDPEAAEKAVEALNGNDNAGKIIYVRCDQKEIERQAELKEKFQRIRMERINRYQGVNL 62
Query: 119 FIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNG 178
++KNL +ID+ L FA FGT+ S KV +G+SKG+GFV F + E A AI +N
Sbjct: 63 YVKNLADNIDDVRLRKEFAQFGTITSAKVMTTEDGRSKGFGFVCFRSPEEAAKAIVEMNE 122
Query: 179 MLINDKQVYVGLFVRRQERAQQNVSPKF----------------TNVYVNNLAETVTDED 222
LI + +YV L ++Q+R Q S N+++ NL +++ DE
Sbjct: 123 KLIEARPLYVALAQKKQDRKAQLASQYMQRTSSRDMPEHRIGPGVNLFIKNLDKSIDDEK 182
Query: 223 LKKIFGHFGTITSAIVM 239
L++ F FGTITSA V+
Sbjct: 183 LREEFSQFGTITSAKVV 199
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 21/143 (14%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LYV +L N+++ +L F+Q + S +V + RS G+ +V + +P++AA
Sbjct: 57 YQGVNLYVKNLADNIDDVRLRKEFAQFGTITSAKVMTTEDGRSK-GFGFVCFRSPEEAAK 115
Query: 85 AKEALNFMPINGKPIRIMY-------------------SHRDPSIRKSGYG-NVFIKNLD 124
A +N I +P+ + S RD + G G N+FIKNLD
Sbjct: 116 AIVEMNEKLIEARPLYVALAQKKQDRKAQLASQYMQRTSSRDMPEHRIGPGVNLFIKNLD 175
Query: 125 TSIDNKALCDTFAAFGTVLSCKV 147
SID++ L + F+ FGT+ S KV
Sbjct: 176 KSIDDEKLREEFSQFGTITSAKV 198
>gi|162605986|ref|XP_001713508.1| polyadenylate-binding protein [Guillardia theta]
gi|13794428|gb|AAK39803.1|AF165818_11 polyadenylate-binding protein [Guillardia theta]
Length = 389
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 144/244 (59%), Gaps = 4/244 (1%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
LYVGDL ++ + L +F + ++ +R+C+D +SLGY+YV +++ A A +
Sbjct: 6 LYVGDLNVSLKDIDLERIFRKDYEISGLRICKDIFSGNSLGYSYVYFNSYSSAKKALNDM 65
Query: 90 NFMP---INGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
NF + PIRIM+ + + SIRKSGYGN+FIKNL + K L F+ +G +LS K
Sbjct: 66 NFYSDTELFKTPIRIMWKNNNNSIRKSGYGNLFIKNLPYNFSPKDLHSLFSEYGEILSSK 125
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF 206
+ D+ G S GYGFV ++ + A +AI LNG LI++K + V F+ + +R + + F
Sbjct: 126 IKYDNEGSSLGYGFVHYKEMKDAISAINNLNGKLISNKMITVKHFLNKSQRERISSCDLF 185
Query: 207 TNVYVNNL-AETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
TN+YV NL + ++++ + +FG FG ITS + + + F ++NF++ + A A+
Sbjct: 186 TNIYVKNLPVDKLSEKVIFNLFGVFGKITSIFIPLWYNSIPKGFAYINFENHEDAEEAII 245
Query: 266 KLNG 269
+N
Sbjct: 246 TMNN 249
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 116/244 (47%), Gaps = 28/244 (11%)
Query: 153 GQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVY--VGLF---VRRQERAQQNVSPK-- 205
G S GY +V F + +A+ A+ ND Y LF +R + N K
Sbjct: 42 GNSLGYSYVYFNSYSSAKKAL--------NDMNFYSDTELFKTPIRIMWKNNNNSIRKSG 93
Query: 206 FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
+ N+++ NL + +DL +F +G I S+ + D++G S +GFV+++ A +A+
Sbjct: 94 YGNLFIKNLPYNFSPKDLHSLFSEYGEILSSKIKYDNEGSSLGYGFVHYKEMKDAISAIN 153
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL-DDSINDE 324
LNG ++K+ V +++R ERIS + N+Y+KNL D ++++
Sbjct: 154 NLNGKLISNKMITVKHFLNKSQR----------ERISSCDLF--TNIYVKNLPVDKLSEK 201
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
+ LF FG ITS + + + KG + F E+A A+ MN + I K L V
Sbjct: 202 VIFNLFGVFGKITSIFIPLWYNSIPKGFAYINFENHEDAEEAIITMNNRKIAGKSLIVCK 261
Query: 385 AQRK 388
A K
Sbjct: 262 AINK 265
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 91/172 (52%), Gaps = 8/172 (4%)
Query: 22 PSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQD 81
SGYGN L++ +L N + L+ LFS+ +++S ++ D ++ SSLGY +V+Y +D
Sbjct: 91 KSGYGN--LFIKNLPYNFSPKDLHSLFSEYGEILSSKIKYD-NEGSSLGYGFVHYKEMKD 147
Query: 82 AANAKEALNFMPINGKPIRIMY----SHRDPSIRKSGYGNVFIKNLDTS-IDNKALCDTF 136
A +A LN I+ K I + + S R+ + N+++KNL + K + + F
Sbjct: 148 AISAINNLNGKLISNKMITVKHFLNKSQRERISSCDLFTNIYVKNLPVDKLSEKVIFNLF 207
Query: 137 AAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYV 188
FG + S + + N KG+ ++ FEN E A+ AI +N I K + V
Sbjct: 208 GVFGKITSIFIPLWYNSIPKGFAYINFENHEDAEEAIITMNNRKIAGKSLIV 259
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 14/184 (7%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-SDGKSRCFGFVNFQSPDAAAAAVEKL 267
+YV +L ++ D DL++IF I+ + KD G S + +V F S +A A+ +
Sbjct: 6 LYVGDLNVSLKDIDLERIFRKDYEISGLRICKDIFSGNSLGYSYVYFNSYSSAKKALNDM 65
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
N ++ + R + + ++ + NL++KNL + + + L
Sbjct: 66 NFYSDTELFKTPIRIMWKNNNNSIRKSGY-------------GNLFIKNLPYNFSPKDLH 112
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQR 387
LFSE+G I S K+ D G S G GF + ++A A+N +NGK+I K + V
Sbjct: 113 SLFSEYGEILSSKIKYDNEGSSLGYGFVHYKEMKDAISAINNLNGKLISNKMITVKHFLN 172
Query: 388 KEER 391
K +R
Sbjct: 173 KSQR 176
>gi|55417872|gb|AAV50098.1| polyadenylate binding protein [Caenorhabditis remanei]
Length = 179
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/183 (47%), Positives = 114/183 (62%), Gaps = 13/183 (7%)
Query: 282 AQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKV 341
AQK++ER A+L+ K EQ ++ R +K +G NLY+KNLD+S++DE LK+ F FG ITS KV
Sbjct: 1 AQKKSERHAELKKKHEQHKVERMQKYQGVNLYVKNLDESVDDEALKKQFENFGNITSAKV 60
Query: 342 MVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ 401
M D++G SKG GF F PEEAT A+ EMN KM+ KPLYVA+AQRKE+R+A+L +Q+ Q
Sbjct: 61 MTDENGRSKGFGFVCFEKPEEATTAVTEMNSKMVCSKPLYVALAQRKEDRRAQLASQYMQ 120
Query: 402 IRAP---------GGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQ 452
A GGM A PGY+ P QQ G P + P +G QQ
Sbjct: 121 RLASMRMHSNVPGGGMYNPAQTGPGYYVANPM---QQQRNFAGGPQIARPGGGRWG-QQN 176
Query: 453 VFP 455
+P
Sbjct: 177 QYP 179
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 59/92 (64%)
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
N+YV NL E+V DE LKK F +FG ITSA VM D +G+S+ FGFV F+ P+ A AV +
Sbjct: 29 VNLYVKNLDESVDDEALKKQFENFGNITSAKVMTDENGRSKGFGFVCFEKPEEATTAVTE 88
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+N K YV AQ++ +R A L +++ Q
Sbjct: 89 MNSKMVCSKPLYVALAQRKEDRRAQLASQYMQ 120
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 55/87 (63%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N+++KNLD S+D++AL F FG + S KV D NG+SKG+GFV FE E A A+ +
Sbjct: 30 NLYVKNLDESVDDEALKKQFENFGNITSAKVMTDENGRSKGFGFVCFEKPEEATTAVTEM 89
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVS 203
N ++ K +YV L R+++R Q S
Sbjct: 90 NSKMVCSKPLYVALAQRKEDRRAQLAS 116
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LYV +L+++V++ L F + S +V D++ RS G+ +V + P++A
Sbjct: 26 YQGVNLYVKNLDESVDDEALKKQFENFGNITSAKVMTDENGRSK-GFGFVCFEKPEEATT 84
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIR 111
A +N + KP+ + + R R
Sbjct: 85 AVTEMNSKMVCSKPLYVALAQRKEDRR 111
>gi|294879376|ref|XP_002768666.1| glycine-rich RNA-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239871376|gb|EER01384.1| glycine-rich RNA-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 342
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 134/242 (55%), Gaps = 44/242 (18%)
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
S FTNVY+ ++ + T+E +++ FG FG ITS + +D K R F FVNF + A A
Sbjct: 1 SENFTNVYIKHIPPSWTEEKIREEFGAFGEITSFAMQ--TDPKGRRFAFVNFAEFEQARA 58
Query: 263 AVEKLNG---------------------------------TTNNDKV------WYVGRAQ 283
AVE ++G ++D V YV RAQ
Sbjct: 59 AVEDMDGEDVRNEEEKAADKAQREREREERRVAREAVGDEVESDDDVEPESYRLYVARAQ 118
Query: 284 KRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMV 343
+AER A L+ +F + ++ + G NLY+KNL ++++D +LK +F FGTITS KVM
Sbjct: 119 SKAERAAVLKEQFAAGKGAQGGRFGGVNLYVKNLGETVDDNELKRMFEPFGTITSVKVMT 178
Query: 344 DQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIR 403
D G S+G GF FS EEAT+A+ +M+ K+IG KPLYV + +++E+R RLQ ++ R
Sbjct: 179 DDKGVSRGFGFVCFSTHEEATKAVTDMHLKLIGGKPLYVGMHEKREQRLERLQQRY---R 235
Query: 404 AP 405
AP
Sbjct: 236 AP 237
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 103/233 (44%), Gaps = 53/233 (22%)
Query: 115 YGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIK 174
+ NV+IK++ S + + + F AFG + S + D G+ + FV F E A+ A++
Sbjct: 4 FTNVYIKHIPPSWTEEKIREEFGAFGEITSFAMQTDPKGRR--FAFVNFAEFEQARAAVE 61
Query: 175 MLNGMLINDKQ---------------------------------------VYVGLFVRRQ 195
++G + +++ +YV +
Sbjct: 62 DMDGEDVRNEEEKAADKAQREREREERRVAREAVGDEVESDDDVEPESYRLYVARAQSKA 121
Query: 196 ERA----QQNVSPK--------FTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD 243
ERA +Q + K N+YV NL ETV D +LK++F FGTITS VM D
Sbjct: 122 ERAAVLKEQFAAGKGAQGGRFGGVNLYVKNLGETVDDNELKRMFEPFGTITSVKVMTDDK 181
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKF 296
G SR FGFV F + + A AV ++ K YVG +KR +R L+ ++
Sbjct: 182 GVSRGFGFVCFSTHEEATKAVTDMHLKLIGGKPLYVGMHEKREQRLERLQQRY 234
>gi|190406596|gb|EDV09863.1| poly(A) binding protein [Saccharomyces cerevisiae RM11-1a]
Length = 611
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 187/390 (47%), Gaps = 61/390 (15%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
V L++GDL + V E L +F + VS +VC D + SLG+ Y+N+ + ++A A E
Sbjct: 91 VPLFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAEKAME 150
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTS---IDNKALCDTFAAFGTVLS 144
LN+ +NGK IRIM S R+ + RK+ NVF NL + + + DTF+ +G +LS
Sbjct: 151 ELNYTKVNGKEIRIMPSLRNTTFRKNFGTNVFFSNLPLNNPLLTTRVFYDTFSRYGKILS 210
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA------ 198
CK +DS K GFV FE+E+ A+N IKM N K++ G+ ++ R+
Sbjct: 211 CK--LDS---RKDIGFVYFEDEKTARNVIKMYNNTSFFGKKILCGIHFDKEVRSVPNFET 265
Query: 199 -------------QQNVSPKFT----------------NVYVNNLAETVTDEDLKKIFGH 229
+Q+++ K + ++++ NL T +D+ F
Sbjct: 266 QKSRLDAETIIEKEQSLNEKHSKGNDKESKNIYSSSQNSIFIKNLPTITTRDDILNFFSE 325
Query: 230 FGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAERE 289
G I S I + ++ + FV +++ + A+++ N K V RAQ + E
Sbjct: 326 VGPIKS-IYLSNATKVKYLWAFVTYKNSSDSEKAIKRYNNFYFRGKKLLVTRAQDKEE-- 382
Query: 290 ADLRAKF-EQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD--QH 346
RAKF E ++IS L+L+NL N E LK L + I K+ +D
Sbjct: 383 ---RAKFIESQKIS--------TLFLENLSAVCNKEFLKYLCHQ-ENIRPFKIQIDGYDE 430
Query: 347 GFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
S SGF F E+ATR N +N +++G
Sbjct: 431 NSSTYSGFIKFRNFEDATRIFNFLNNRLVG 460
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 86/208 (41%), Gaps = 33/208 (15%)
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAA 261
S K +++ +L ETVT+E LK IF + + SA V DS KS G++NF+ + A
Sbjct: 87 SKKLVPLFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAE 146
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL---D 318
A+E+LN T N K + + R R F G N++ NL +
Sbjct: 147 KAMEELNYTKVNGKEIRIMPSL----RNTTFRKNF------------GTNVFFSNLPLNN 190
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
+ + FS +G I SCK+ K GF F + A + N K
Sbjct: 191 PLLTTRVFYDTFSRYGKILSCKL-----DSRKDIGFVYFEDEKTARNVIKMYNNTSFFGK 245
Query: 379 PLYVAVAQRKEER--------KARLQAQ 398
+ + KE R K+RL A+
Sbjct: 246 KILCGIHFDKEVRSVPNFETQKSRLDAE 273
>gi|14318545|ref|NP_116678.1| Pes4p [Saccharomyces cerevisiae S288c]
gi|1172434|sp|P39684.2|PES4_YEAST RecName: Full=Protein PES4; AltName: Full=DNA polymerase epsilon
suppressor 4
gi|836778|dbj|BAA09262.1| DNA polymerase epsilon suppressor 4 [Saccharomyces cerevisiae]
gi|151940784|gb|EDN59171.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345636|gb|EDZ72395.1| YFR023Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256268849|gb|EEU04202.1| Pes4p [Saccharomyces cerevisiae JAY291]
gi|259146215|emb|CAY79474.1| Pes4p [Saccharomyces cerevisiae EC1118]
gi|285811918|tpg|DAA12463.1| TPA: Pes4p [Saccharomyces cerevisiae S288c]
gi|392299695|gb|EIW10788.1| Pes4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 611
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 187/390 (47%), Gaps = 61/390 (15%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
V L++GDL + V E L +F + VS +VC D + SLG+ Y+N+ + ++A A E
Sbjct: 91 VPLFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAEKAME 150
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTS---IDNKALCDTFAAFGTVLS 144
LN+ +NGK IRIM S R+ + RK+ NVF NL + + + DTF+ +G +LS
Sbjct: 151 ELNYTKVNGKEIRIMPSLRNTTFRKNFGTNVFFSNLPLNNPLLTTRVFYDTFSRYGKILS 210
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA------ 198
CK +DS K GFV FE+E+ A+N IKM N K++ G+ ++ R+
Sbjct: 211 CK--LDS---RKDIGFVYFEDEKTARNVIKMYNNTSFFGKKILCGIHFDKEVRSVPNFET 265
Query: 199 -------------QQNVSPKFT----------------NVYVNNLAETVTDEDLKKIFGH 229
+Q+++ K + ++++ NL T +D+ F
Sbjct: 266 QKSRLDAETIIEKEQSLNEKHSKGNDKESKNIYSSSQNSIFIKNLPTITTRDDILNFFSE 325
Query: 230 FGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAERE 289
G I S I + ++ + FV +++ + A+++ N K V RAQ + E
Sbjct: 326 VGPIKS-IYLSNATKVKYLWAFVTYKNSSDSEKAIKRYNNFYFRGKKLLVTRAQDKEE-- 382
Query: 290 ADLRAKF-EQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD--QH 346
RAKF E ++IS L+L+NL N E LK L + I K+ +D
Sbjct: 383 ---RAKFIESQKIS--------TLFLENLSAVCNKEFLKYLCHQ-ENIRPFKIQIDGYDE 430
Query: 347 GFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
S SGF F E+ATR N +N +++G
Sbjct: 431 NSSTYSGFIKFRNFEDATRIFNFLNNRLVG 460
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 86/208 (41%), Gaps = 33/208 (15%)
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAA 261
S K +++ +L ETVT+E LK IF + + SA V DS KS G++NF+ + A
Sbjct: 87 SKKLVPLFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAE 146
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL---D 318
A+E+LN T N K + + R R F G N++ NL +
Sbjct: 147 KAMEELNYTKVNGKEIRIMPSL----RNTTFRKNF------------GTNVFFSNLPLNN 190
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
+ + FS +G I SCK+ K GF F + A + N K
Sbjct: 191 PLLTTRVFYDTFSRYGKILSCKL-----DSRKDIGFVYFEDEKTARNVIKMYNNTSFFGK 245
Query: 379 PLYVAVAQRKEER--------KARLQAQ 398
+ + KE R K+RL A+
Sbjct: 246 KILCGIHFDKEVRSVPNFETQKSRLDAE 273
>gi|401625916|gb|EJS43897.1| pes4p [Saccharomyces arboricola H-6]
Length = 611
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 188/392 (47%), Gaps = 65/392 (16%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
V L++GDL + V E L ++F + VS +VC D + SLG+ Y+N+ + ++A A E
Sbjct: 91 VPLFIGDLHETVTEETLKEIFGKFPSFVSAKVCLDSVTKKSLGHGYLNFDDKEEAEKAME 150
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTS---IDNKALCDTFAAFGTVLS 144
LN+ INGK +RIM S R+ + RK+ NVF NL + + + DTF+ +G +LS
Sbjct: 151 ELNYTEINGKEVRIMPSLRNTTFRKNFGTNVFFSNLPLNNPLLTTRVFYDTFSRYGKILS 210
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER------- 197
CK +DS K GFV FE+E+ A+N IKM N K++ G+ ++ R
Sbjct: 211 CK--LDS---RKDIGFVYFEDEKTARNVIKMYNNTSFFGKKILCGIHFDKEVRSVPNFET 265
Query: 198 ----------------------------AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGH 229
++ N+S ++++ NL T +D+ F
Sbjct: 266 QKSRLDSETIIEKEQALNDKKVQRNDGDSKNNLSSSQNSIFIKNLPTITTRDDILNFFSE 325
Query: 230 FGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAERE 289
G I S I + + + F+ ++S + + A+++ N K V RAQ + E
Sbjct: 326 VGPIKS-IYLSTATKVKYLWAFITYKSGEDSERAIKRYNNFYFRGKKLLVARAQDKEE-- 382
Query: 290 ADLRAKF-EQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGF 348
RAKF E ++IS L+L+NL N E LK L + I K+ +D G+
Sbjct: 383 ---RAKFIESQKIS--------TLFLENLSAVCNKEFLKYLCHQ-ENIRPFKIQMD--GY 428
Query: 349 SKG----SGFAAFSMPEEATRALNEMNGKMIG 376
++ SG+ F E+ATR N +N +++G
Sbjct: 429 NENSATYSGYIKFKNFEDATRIFNFLNNRLVG 460
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 87/208 (41%), Gaps = 33/208 (15%)
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAA 261
S K +++ +L ETVT+E LK+IFG F + SA V DS KS G++NF + A
Sbjct: 87 SKKLVPLFIGDLHETVTEETLKEIFGKFPSFVSAKVCLDSVTKKSLGHGYLNFDDKEEAE 146
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL---D 318
A+E+LN T N K + + R R F G N++ NL +
Sbjct: 147 KAMEELNYTEINGKEVRIMPSL----RNTTFRKNF------------GTNVFFSNLPLNN 190
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
+ + FS +G I SCK+ K GF F + A + N K
Sbjct: 191 PLLTTRVFYDTFSRYGKILSCKL-----DSRKDIGFVYFEDEKTARNVIKMYNNTSFFGK 245
Query: 379 PLYVAVAQRKEER--------KARLQAQ 398
+ + KE R K+RL ++
Sbjct: 246 KILCGIHFDKEVRSVPNFETQKSRLDSE 273
>gi|93359570|gb|ABF13311.1| poly-A binding protein, partial [Phaseolus vulgaris]
Length = 172
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/137 (59%), Positives = 103/137 (75%), Gaps = 8/137 (5%)
Query: 335 TITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKAR 394
TITSCKVM D +G S+GSGF AFS PEEA+RAL EMNGKM+ KPLYV +AQRKE+R+AR
Sbjct: 1 TITSCKVMRDPNGVSRGSGFVAFSTPEEASRALAEMNGKMVVSKPLYVTLAQRKEDRRAR 60
Query: 395 LQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQV 453
LQAQFAQ+R P GM P + +P Y G P +G QQ++Y QG P ++P Q G+G+QQQ+
Sbjct: 61 LQAQFAQMR-PVGMPPSVGPRVPMYPPGGPGIG-QQIFY-QGPPAIIPSQ-PGFGYQQQL 116
Query: 454 FPGLRPGG---PNYIMP 467
PG+RPG PN+ +P
Sbjct: 117 VPGMRPGAAPVPNFFVP 133
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%)
Query: 232 TITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
TITS VM+D +G SR GFV F +P+ A+ A+ ++NG K YV AQ++ +R A
Sbjct: 1 TITSCKVMRDPNGVSRGSGFVAFSTPEEASRALAEMNGKMVVSKPLYVTLAQRKEDRRAR 60
Query: 292 LRAKFEQER 300
L+A+F Q R
Sbjct: 61 LQAQFAQMR 69
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 141 TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
T+ SCKV D NG S+G GFV F E A A+ +NG ++ K +YV L R+++R
Sbjct: 1 TITSCKVMRDPNGVSRGSGFVAFSTPEEASRALAEMNGKMVVSKPLYVTLAQRKEDR 57
>gi|452239|dbj|BAA05461.1| PES4 PAB-like protein [Saccharomyces cerevisiae]
Length = 555
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 187/390 (47%), Gaps = 61/390 (15%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
V L++GDL + V E L +F + VS +VC D + SLG+ Y+N+ + ++A A E
Sbjct: 91 VPLFIGDLHETVTEETLKGIFKKYPSFVSAKVCIDSVTKKSLGHGYLNFEDKEEAEKAME 150
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTS---IDNKALCDTFAAFGTVLS 144
LN+ +NGK IRIM S R+ + RK+ NVF NL + + + DTF+ +G +LS
Sbjct: 151 ELNYTKVNGKEIRIMPSLRNTTFRKNFGTNVFFSNLPLNNPLLTTRVFYDTFSRYGKILS 210
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA------ 198
CK +DS K GFV FE+E+ A+N IKM N K++ G+ ++ R+
Sbjct: 211 CK--LDS---RKDIGFVYFEDEKTARNVIKMYNNTSFFGKKILCGIHFDKEVRSVPNFET 265
Query: 199 -------------QQNVSPKFT----------------NVYVNNLAETVTDEDLKKIFGH 229
+Q+++ K + ++++ NL T +D+ F
Sbjct: 266 QKSRLDAETIIEKEQSLNEKHSKGNDKESKNIYSSSQNSIFIKNLPTITTRDDILNFFSE 325
Query: 230 FGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAERE 289
G I S I + ++ + FV +++ + A+++ N K V RAQ + E
Sbjct: 326 VGPIKS-IYLSNATKVKYLWAFVTYKNSSDSEKAIKRYNNFYFRGKKLLVTRAQDKEE-- 382
Query: 290 ADLRAKF-EQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD--QH 346
RAKF E ++IS L+L+NL N E LK L + I K+ +D
Sbjct: 383 ---RAKFIESQKIS--------TLFLENLSAVCNKEFLKYLCHQ-ENIRPFKIQIDGYDE 430
Query: 347 GFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
S SGF F E+ATR N +N +++G
Sbjct: 431 NSSTYSGFIKFRNFEDATRIFNFLNNRLVG 460
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 86/208 (41%), Gaps = 33/208 (15%)
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAA 261
S K +++ +L ETVT+E LK IF + + SA V DS KS G++NF+ + A
Sbjct: 87 SKKLVPLFIGDLHETVTEETLKGIFKKYPSFVSAKVCIDSVTKKSLGHGYLNFEDKEEAE 146
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL---D 318
A+E+LN T N K + + R R F G N++ NL +
Sbjct: 147 KAMEELNYTKVNGKEIRIMPSL----RNTTFRKNF------------GTNVFFSNLPLNN 190
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
+ + FS +G I SCK+ K GF F + A + N K
Sbjct: 191 PLLTTRVFYDTFSRYGKILSCKL-----DSRKDIGFVYFEDEKTARNVIKMYNNTSFFGK 245
Query: 379 PLYVAVAQRKEER--------KARLQAQ 398
+ + KE R K+RL A+
Sbjct: 246 KILCGIHFDKEVRSVPNFETQKSRLDAE 273
>gi|349577937|dbj|GAA23104.1| K7_Pes4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 611
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 187/390 (47%), Gaps = 61/390 (15%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
V L++GDL + V E L ++F + VS +VC D + SLG+ Y+N+ + ++A A E
Sbjct: 91 VPLFIGDLHETVTEETLKEIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAEKAME 150
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTS---IDNKALCDTFAAFGTVLS 144
LN+ +NGK IRIM S R+ + RK+ NVF NL + + + DTF+ +G +LS
Sbjct: 151 ELNYTKVNGKEIRIMPSLRNTTFRKNFGTNVFFSNLPLNNPLLTTRVFYDTFSRYGKILS 210
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA------ 198
CK +DS K GFV FE+E+ A+N IKM N K++ G+ ++ R+
Sbjct: 211 CK--LDS---RKDIGFVYFEDEKTARNVIKMYNNTSFFGKKILCGIHFDKEVRSVPNFET 265
Query: 199 -------------QQNVSPKFT----------------NVYVNNLAETVTDEDLKKIFGH 229
+Q+++ K + ++++ NL T +D+ F
Sbjct: 266 QKSRLDAETIIEKEQSLNEKHSKGNDKESKNIYSSSQNSIFIKNLPTITTRDDILNFFSE 325
Query: 230 FGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAERE 289
G I S I + ++ + FV +++ + A+++ N K V RAQ + E
Sbjct: 326 VGPIKS-IYLSNATKVKYLWAFVTYKNSSDSEKAIKRYNNFYFRGKKLLVTRAQDKEE-- 382
Query: 290 ADLRAKF-EQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD--QH 346
RAKF E ++IS L+L+NL N E LK L + I K+ +D
Sbjct: 383 ---RAKFIESQKIS--------TLFLENLSAVCNKEFLKYLCHQ-ENIRPFKIQIDGYDE 430
Query: 347 GFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
S SG F E+ATR N +N +++G
Sbjct: 431 NSSTYSGLIKFRNFEDATRIFNFLNNRLVG 460
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 33/208 (15%)
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAA 261
S K +++ +L ETVT+E LK+IF + + SA V DS KS G++NF+ + A
Sbjct: 87 SKKLVPLFIGDLHETVTEETLKEIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAE 146
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL---D 318
A+E+LN T N K + + R R F G N++ NL +
Sbjct: 147 KAMEELNYTKVNGKEIRIMPSL----RNTTFRKNF------------GTNVFFSNLPLNN 190
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
+ + FS +G I SCK+ K GF F + A + N K
Sbjct: 191 PLLTTRVFYDTFSRYGKILSCKL-----DSRKDIGFVYFEDEKTARNVIKMYNNTSFFGK 245
Query: 379 PLYVAVAQRKEER--------KARLQAQ 398
+ + KE R K+RL A+
Sbjct: 246 KILCGIHFDKEVRSVPNFETQKSRLDAE 273
>gi|320168681|gb|EFW45580.1| polyadenylate-binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 814
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 182/365 (49%), Gaps = 33/365 (9%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S G + L V +L+ +++ QL D+F + + +V SS+G V Y + DA
Sbjct: 74 SKVGAIKLVVKNLDPRMDDQQLRDIFGEFGTMTLCKVA------SSIGVGLVTYESFDDA 127
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A +N M +NG+ +++ HR P R S + ++NL ++L FG V
Sbjct: 128 HAAMTQVNGMYLNGQQVQV---HRLPE-RPS----LIVRNLPADASEESLAALCRPFGRV 179
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER-AQQN 201
+ + G V + E A AI+ L+G + Q+ V R ER +
Sbjct: 180 -GVATIVQEAPEDAPMGVVCLDRFEDALTAIRALHGSKLGSNQLSVTFPATRAERECESA 238
Query: 202 VSPKFT----NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
V+ + + + N+ + D+ L+++F FGTI S +M+D GKS+ +GFV + +
Sbjct: 239 VAQRLERLQGKLVIKNMDVDMDDDQLEELFAPFGTIISLHIMRDETGKSKGYGFVAYSTT 298
Query: 258 DAAAAAVEKLNGTTNN------DKVWYVGRAQK---RAEREADLRAKFEQERISRYEKLK 308
+AA+ A+ +G T + D + +A R A++R E RI+++ K
Sbjct: 299 EAASKAMAATHGQTFDRLTRPLDVTIFTSSEHDGMFKANRVAEVRHHAEVARIAQFRK-- 356
Query: 309 GANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALN 368
NL ++NL +SI++++L+ LF+ FG I +C V+ D G S+ GF F+ EEA++A+
Sbjct: 357 --NLCIRNLGESIDEKQLRALFAPFGKIRTCHVLRDDMGRSRKVGFVDFATMEEASKAVA 414
Query: 369 EMNGK 373
EM+GK
Sbjct: 415 EMHGK 419
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 145/294 (49%), Gaps = 27/294 (9%)
Query: 112 KSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQN 171
K G + +KNLD +D++ L D F FGT+ CKVA S G G V +E+ + A
Sbjct: 75 KVGAIKLVVKNLDPRMDDQQLRDIFGEFGTMTLCKVA-----SSIGVGLVTYESFDDAHA 129
Query: 172 AIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFG 231
A+ +NGM +N +QV V P+ ++ V NL ++E L + FG
Sbjct: 130 AMTQVNGMYLNGQQVQVHRL------------PERPSLIVRNLPADASEESLAALCRPFG 177
Query: 232 TITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
+ A +++++ + G V + A A+ L+G+ V RAERE
Sbjct: 178 RVGVATIVQEAP-EDAPMGVVCLDRFEDALTAIRALHGSKLGSNQLSVTFPATRAEREC- 235
Query: 292 LRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKG 351
E R E+L+G L +KN+D ++D++L+ELF+ FGTI S +M D+ G SKG
Sbjct: 236 -----ESAVAQRLERLQG-KLVIKNMDVDMDDDQLEELFAPFGTIISLHIMRDETGKSKG 289
Query: 352 SGFAAFSMPEEATRALNEMNGKMIGR--KPLYVAVAQRKEERKARLQAQFAQIR 403
GF A+S E A++A+ +G+ R +PL V + E + A++R
Sbjct: 290 YGFVAYSTTEAASKAMAATHGQTFDRLTRPLDVTIFTSSEHDGMFKANRVAEVR 343
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 189/405 (46%), Gaps = 62/405 (15%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
L + +++ ++++ QL +LF+ ++S+ + RD++ +S GY +V YS + A+ A A
Sbjct: 250 LVIKNMDVDMDDDQLEELFAPFGTIISLHIMRDETGKSK-GYGFVAYSTTEAASKAMAAT 308
Query: 90 NFMPIN--GKPIRI----------MY-SHRDPSIRKSG--------YGNVFIKNLDTSID 128
+ + +P+ + M+ ++R +R N+ I+NL SID
Sbjct: 309 HGQTFDRLTRPLDVTIFTSSEHDGMFKANRVAEVRHHAEVARIAQFRKNLCIRNLGESID 368
Query: 129 NKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYV 188
K L FA FG + +C V D G+S+ GFV F E A A+ ++G Q+ +
Sbjct: 369 EKQLRALFAPFGKIRTCHVLRDDMGRSRKVGFVDFATMEEASKAVAEMHGKPSPGTQMPM 428
Query: 189 GLFVRRQERAQQ-----NVSPKFTN-----------------VYVNNLAETVTDEDLKKI 226
+ + + R Q N S K ++ +YV N+ V EDL+++
Sbjct: 429 TVTLSHRARDAQDPPAPNASGKDSSTDEAEPDAEGQIRPRKLIYVKNIDPAVELEDLQRV 488
Query: 227 FGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRA 286
FG FG I S+ +M+D G S+ G V++ DAA AAV ++G ++ G+
Sbjct: 489 FGQFGAIVSSNIMRDDAGISKGIGHVDYLHADAARAAVAAMDGK----RLTATGQP---- 540
Query: 287 EREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH 346
LR R R+ ++ A+L +KNL+ SIN L++LFS FG I S + + Q
Sbjct: 541 -----LRVSLPDPR-DRFSPIRYASLIIKNLEQSINLSALRDLFSPFGCILSSRTIETQ- 593
Query: 347 GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEER 391
+ F E A+ +NG ++ P+ + RK+ R
Sbjct: 594 ---PRAALVDFLSEEACQNAIANINGAIVNGLPVTASPYVRKDRR 635
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 177/368 (48%), Gaps = 38/368 (10%)
Query: 15 SATTAAVPSGYGNVS----LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLG 70
S+T A P G + +YV +++ V L +F Q +VS + RD + S G
Sbjct: 452 SSTDEAEPDAEGQIRPRKLIYVKNIDPAVELEDLQRVFGQFGAIVSSNIMRDDAGISK-G 510
Query: 71 YAYVNYSNPQDAANAKEALN--FMPINGKPIRIMYSHRDPSIRKS--GYGNVFIKNLDTS 126
+V+Y + A A A++ + G+P+R+ S DP R S Y ++ IKNL+ S
Sbjct: 511 IGHVDYLHADAARAAVAAMDGKRLTATGQPLRV--SLPDPRDRFSPIRYASLIIKNLEQS 568
Query: 127 IDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQV 186
I+ AL D F+ FG +LS + I++ ++ V F +EEA QNAI +NG ++N V
Sbjct: 569 INLSALRDLFSPFGCILSSRT-IETQPRA---ALVDFLSEEACQNAIANINGAIVNGLPV 624
Query: 187 YVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKS 246
+VR+ R +VYV NL L +F G I + IV +D
Sbjct: 625 TASPYVRKDRR----------SVYVANLPANYNYVKLMALFADCGKIVTTIVPRDFS--- 671
Query: 247 RCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK 306
GFV F P A+ E+ +G + YV R + + A E ++ Y
Sbjct: 672 -TVGFVCFDQP-ASVELAERFHGHVLEGEELYVSRFPLQTDPAPPPHATSE---VAPYHI 726
Query: 307 LKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRA 366
L YL N+D +++K++EL + +GT+T+ V G S+G F F+ E+A++A
Sbjct: 727 L-----YLTNVDFEASEDKVRELCAPYGTLTAVHVRRRADGTSRGFAFVHFTNVEDASKA 781
Query: 367 LNEMNGKM 374
+ ++G++
Sbjct: 782 KDALSGQI 789
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 282 AQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKV 341
AQ R+ + + RA R+ + K+ L +KNLD ++D++L+++F EFGT+T CKV
Sbjct: 53 AQSRSPQPSAARALLL--RVHQRSKVGAIKLVVKNLDPRMDDQQLRDIFGEFGTMTLCKV 110
Query: 342 MVDQHGFSKGSGFAAFSMPEEATRALNEMNG 372
S G G + ++A A+ ++NG
Sbjct: 111 -----ASSIGVGLVTYESFDDAHAAMTQVNG 136
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 80/205 (39%), Gaps = 34/205 (16%)
Query: 189 GLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRC 248
L +R +R++ + V NL + D+ L+ IFG FGT+T V S
Sbjct: 65 ALLLRVHQRSKVGA----IKLVVKNLDPRMDDQQLRDIFGEFGTMTLCKV-----ASSIG 115
Query: 249 FGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLK 308
G V ++S D A AA+ ++NG N + V R +R
Sbjct: 116 VGLVTYESFDDAHAAMTQVNGMYLNGQQVQVHRLPER----------------------- 152
Query: 309 GANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALN 368
+L ++NL ++E L L FG + +V + G E+A A+
Sbjct: 153 -PSLIVRNLPADASEESLAALCRPFGRV-GVATIVQEAPEDAPMGVVCLDRFEDALTAIR 210
Query: 369 EMNGKMIGRKPLYVAVAQRKEERKA 393
++G +G L V + ER+
Sbjct: 211 ALHGSKLGSNQLSVTFPATRAEREC 235
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
LY+ +++ +E ++ +L + + +V V R ++ +S G+A+V+++N +DA+ AK+AL
Sbjct: 727 LYLTNVDFEASEDKVRELCAPYGTLTAVHV-RRRADGTSRGFAFVHFTNVEDASKAKDAL 785
Query: 90 NFMPINGKPIRIMYSHRDP 108
+ G RI+ S+ P
Sbjct: 786 SGQIPAGFRRRIVVSYAHP 804
>gi|331243001|ref|XP_003334145.1| hypothetical protein PGTG_15382 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309313135|gb|EFP89726.1| hypothetical protein PGTG_15382 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 311
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 142/268 (52%), Gaps = 11/268 (4%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRV-CRDQSKRSSLGYAYVNYSNPQDAANAKE 87
S+YVGDL N+ E +L +FSQ + V+SV++ +S + YAY+ YS+ A
Sbjct: 29 SVYVGDLPANITEEELIKVFSQASPVLSVQIKFPSRSVKGPRAYAYIAYSSADKVDEAIR 88
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
N GKP R+M R ++ NVF+++L ++ A DTFA FG +LS ++
Sbjct: 89 EYNHTKFAGKPCRVMKPKRG-IVKGPPEANVFVQDLPLALSALAFHDTFAEFGEILSSRL 147
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIN----DKQVYVGLFVRRQERA---QQ 200
++D SKGYGF+Q+ E AQ AI NG L++ +K + +FV++ + +
Sbjct: 148 SVDRENVSKGYGFIQYATVEQAQAAIAETNGSLLDVAGGEKPIRTSIFVKKDAPSSPTSR 207
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAA 260
+ +F N++ NL +T E K + +G ITSA++ D DGK F +FQ+ +
Sbjct: 208 AAAREFKNLFFKNLPADITLEAFKATWSKYGVITSAVLTVDEDGKPTGTAFASFQN-HSD 266
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAER 288
A V K D+V+ V RA +AER
Sbjct: 267 AVRVIKATQRKGPDEVYAV-RALSKAER 293
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 14/277 (5%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQS--KGYGFVQFENEEAAQNAIK 174
+V++ +L +I + L F+ VLS ++ S + Y ++ + + + AI+
Sbjct: 29 SVYVGDLPANITEEELIKVFSQASPVLSVQIKFPSRSVKGPRAYAYIAYSSADKVDEAIR 88
Query: 175 MLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTIT 234
N K V + +R P+ NV+V +L ++ F FG I
Sbjct: 89 EYNHTKFAGKPCRV----MKPKRGIVKGPPE-ANVFVQDLPLALSALAFHDTFAEFGEIL 143
Query: 235 SAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRA 294
S+ + D + S+ +GF+ + + + A AA+ + NG+ + V +K ++
Sbjct: 144 SSRLSVDRENVSKGYGFIQYATVEQAQAAIAETNGS-----LLDVAGGEKPIRTSIFVKK 198
Query: 295 KFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGF 354
SR + NL+ KNL I E K +S++G ITS + VD+ G G+ F
Sbjct: 199 DAPSSPTSRAAAREFKNLFFKNLPADITLEAFKATWSKYGVITSAVLTVDEDGKPTGTAF 258
Query: 355 AAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEER 391
A+F +A R + K G +Y A K ER
Sbjct: 259 ASFQNHSDAVRVIKATQRK--GPDEVYAVRALSKAER 293
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 29/196 (14%)
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKS--RCFGFVNFQSPDAA 260
+P +VYV +L +T+E+L K+F + S + S R + ++ + S D
Sbjct: 24 TPAEHSVYVGDLPANITEEELIKVFSQASPVLSVQIKFPSRSVKGPRAYAYIAYSSADKV 83
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKG---ANLYLKNL 317
A+ + N T K V + ++ +KG AN+++++L
Sbjct: 84 DEAIREYNHTKFAGKPCRVMKPKRGI--------------------VKGPPEANVFVQDL 123
Query: 318 DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI-- 375
+++ + F+EFG I S ++ VD+ SKG GF ++ E+A A+ E NG ++
Sbjct: 124 PLALSALAFHDTFAEFGEILSSRLSVDRENVSKGYGFIQYATVEQAQAAIAETNGSLLDV 183
Query: 376 --GRKPLYVAVAQRKE 389
G KP+ ++ +K+
Sbjct: 184 AGGEKPIRTSIFVKKD 199
>gi|34015127|gb|AAQ56324.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
Length = 266
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 117/191 (61%), Gaps = 25/191 (13%)
Query: 446 GYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFM----- 497
G+GFQQ + PG+RP PN++MP Q Q P QR RR+G T +QQP M
Sbjct: 62 GFGFQQHLIPGMRPSVGPIPNFVMPMVQQGQ-QP-QRPAGRRAG-TGGIQQPMPMGHQQM 118
Query: 498 --RNSNQGIRYL------DNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTL 549
R S G RY DNA G V +VP P+E+ MP + + P VPI L
Sbjct: 119 LPRGSRGGYRYASGRGMPDNAFRG----VGGLVPSPYEMGRMPLS--DAGAPPQVPIGAL 172
Query: 550 TSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTK 609
SALA++ PD + MLGE LYPLV+ +E A+KVTGMLLEMDQTEVLHLIESP+ALK K
Sbjct: 173 ASALANSPPDQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKAK 232
Query: 610 VAEAMAVLQEA 620
VAEAM VL+ A
Sbjct: 233 VAEAMEVLRNA 243
>gi|222640326|gb|EEE68458.1| hypothetical protein OsJ_26852 [Oryza sativa Japonica Group]
Length = 252
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/191 (50%), Positives = 116/191 (60%), Gaps = 25/191 (13%)
Query: 446 GYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFM----- 497
G+GFQQ + PG+RP PN++MP Q Q QR RR+G T +QQP M
Sbjct: 48 GFGFQQHLIPGMRPSVGPIPNFVMPMVQQGQQP--QRPAGRRAG-TGGIQQPMPMGHQQM 104
Query: 498 --RNSNQGIRYL------DNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTL 549
R S G RY DNA G V +VP P+E+ MP + + P VPI L
Sbjct: 105 LPRGSRGGYRYASGRGMPDNAFRG----VGGLVPSPYEMGRMPLS--DAGAPPQVPIGAL 158
Query: 550 TSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTK 609
SALA++ PD + MLGE LYPLV+ +E A+KVTGMLLEMDQTEVLHLIESP+ALK K
Sbjct: 159 ASALANSPPDQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKAK 218
Query: 610 VAEAMAVLQEA 620
VAEAM VL+ A
Sbjct: 219 VAEAMEVLRNA 229
>gi|18677184|gb|AAL78224.1|AF345796_1 hypothetical protein Hgg-30 [Heterodera glycines]
Length = 219
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 98/133 (73%)
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G+ ++ + V RAQK++ER+A+L+ ++EQ + R ++ +G NLY+KNL D+INDE L+
Sbjct: 8 GSEKVEQKFTVCRAQKKSERQAELKRRYEQYKAERIQRYQGVNLYVKNLHDTINDETLRS 67
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRK 388
F +G ITS KVM D+HG SKG GF F +EAT+A+ EMN K+I KPLYVA+AQRK
Sbjct: 68 NFESYGNITSAKVMCDEHGRSKGFGFVCFEKADEATKAVVEMNNKIIENKPLYVALAQRK 127
Query: 389 EERKARLQAQFAQ 401
E+RKA+L +Q+ Q
Sbjct: 128 EDRKAQLASQYMQ 140
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%)
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
N+YV NL +T+ DE L+ F +G ITSA VM D G+S+ FGFV F+ D A AV +
Sbjct: 49 VNLYVKNLHDTINDETLRSNFESYGNITSAKVMCDEHGRSKGFGFVCFEKADEATKAVVE 108
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
+N +K YV AQ++ +R+A L +++ Q
Sbjct: 109 MNNKIIENKPLYVALAQRKEDRKAQLASQYMQ 140
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 55/87 (63%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N+++KNL +I+++ L F ++G + S KV D +G+SKG+GFV FE + A A+ +
Sbjct: 50 NLYVKNLHDTINDETLRSNFESYGNITSAKVMCDEHGRSKGFGFVCFEKADEATKAVVEM 109
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVS 203
N +I +K +YV L R+++R Q S
Sbjct: 110 NNKIIENKPLYVALAQRKEDRKAQLAS 136
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LYV +L +N+ L F + S +V D+ RS G+ +V + +A
Sbjct: 46 YQGVNLYVKNLHDTINDETLRSNFESYGNITSAKVMCDEHGRSK-GFGFVCFEKADEATK 104
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
A +N I KP+ + + R RK+ + +++ L
Sbjct: 105 AVVEMNNKIIENKPLYVALAQRKED-RKAQLASQYMQRL 142
>gi|218200922|gb|EEC83349.1| hypothetical protein OsI_28748 [Oryza sativa Indica Group]
Length = 252
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/191 (50%), Positives = 116/191 (60%), Gaps = 25/191 (13%)
Query: 446 GYGFQQQVFPGLRPGG---PNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFM----- 497
G+GFQQ + PG+RP PN++MP Q Q QR RR+G T +QQP M
Sbjct: 48 GFGFQQHLIPGMRPSVGPIPNFVMPMVQQGQQP--QRPAGRRAG-TGGIQQPMPMGHQQM 104
Query: 498 --RNSNQGIRYL------DNARNGTDQSVVSMVPVPFEVSGMPATPVETPRPVPVPISTL 549
R S G RY DNA G V +VP P+E+ MP + + P VPI L
Sbjct: 105 LPRGSRGGYRYASGRGMPDNAFRG----VGGLVPSPYEMGRMPLS--DAGAPPQVPIGAL 158
Query: 550 TSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTK 609
SALA++ PD + MLGE LYPLV+ +E A+KVTGMLLEMDQTEVLHLIESP+ALK K
Sbjct: 159 ASALANSPPDQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKAK 218
Query: 610 VAEAMAVLQEA 620
VAEAM VL+ A
Sbjct: 219 VAEAMEVLRNA 229
>gi|328851168|gb|EGG00325.1| hypothetical protein MELLADRAFT_28015 [Melampsora larici-populina
98AG31]
Length = 223
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 119/219 (54%), Gaps = 14/219 (6%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYVG+L +VN L ++FSQ + V++ RVC D+ + GY YV+Y+ P++A A
Sbjct: 1 SLYVGNLTDDVNVQDLLNIFSQASPVINARVCIDRITQKPRGYGYVSYATPEEADLALRE 60
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
N + + GKPIR+M S+ N+FIKNL S L D+F FG +LS K++
Sbjct: 61 FNHINLKGKPIRVMRSYSGKPKEFPSEANLFIKNLPKSFTPINLHDSFERFGKILSSKIS 120
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLI---------NDKQVYVGLFVRRQERAQ 199
D G SKGYG++QFEN + + AI N N K++ V +V+ ++R
Sbjct: 121 FDQLGNSKGYGYIQFENPKDSNEAILNSNDFQFDIKDEEESKNMKKLKVTSYVKPEDRK- 179
Query: 200 QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV 238
PKFTNV+ NL T+E K FG ITS I+
Sbjct: 180 ----PKFTNVFFRNLPLDFTEESFSKYASEFGKITSLIL 214
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 17/225 (7%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQS-KGYGFVQFENEEAAQNAIKML 176
+++ NL ++ + L + F+ V++ +V ID Q +GYG+V + E A A++
Sbjct: 2 LYVGNLTDDVNVQDLLNIFSQASPVINARVCIDRITQKPRGYGYVSYATPEEADLALREF 61
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSA 236
N + + K + V R + P N+++ NL ++ T +L F FG I S+
Sbjct: 62 NHINLKGKPIRV----MRSYSGKPKEFPSEANLFIKNLPKSFTPINLHDSFERFGKILSS 117
Query: 237 IVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKF 296
+ D G S+ +G++ F++P + A+ LN ND + + + E E+ K
Sbjct: 118 KISFDQLGNSKGYGYIQFENPKDSNEAI--LNS---NDFQFDI-----KDEEESKNMKKL 167
Query: 297 EQERISRYE--KLKGANLYLKNLDDSINDEKLKELFSEFGTITSC 339
+ + E K K N++ +NL +E + SEFG ITS
Sbjct: 168 KVTSYVKPEDRKPKFTNVFFRNLPLDFTEESFSKYASEFGKITSL 212
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 74/160 (46%), Gaps = 17/160 (10%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEKL 267
+YV NL + V +DL IF + +A V D K R +G+V++ +P+ A A+ +
Sbjct: 2 LYVGNLTDDVNVQDLLNIFSQASPVINARVCIDRITQKPRGYGYVSYATPEEADLALREF 61
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
N K V R+ +E F E ANL++KNL S L
Sbjct: 62 NHINLKGKPIRVMRSYSGKPKE------FPSE----------ANLFIKNLPKSFTPINLH 105
Query: 328 ELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRAL 367
+ F FG I S K+ DQ G SKG G+ F P+++ A+
Sbjct: 106 DSFERFGKILSSKISFDQLGNSKGYGYIQFENPKDSNEAI 145
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 312 LYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEEATRALNEM 370
LY+ NL D +N + L +FS+ + + +V +D+ +G G+ +++ PEEA AL E
Sbjct: 2 LYVGNLTDDVNVQDLLNIFSQASPVINARVCIDRITQKPRGYGYVSYATPEEADLALREF 61
Query: 371 NGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLG 426
N + KP+ V + + ++ +A P +P+ H R G
Sbjct: 62 NHINLKGKPIRVMRSYSGKPKEFPSEANLFIKNLPKSFTPI-----NLHDSFERFG 112
>gi|403372370|gb|EJY86082.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 695
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 165/321 (51%), Gaps = 17/321 (5%)
Query: 29 SLYVGDL--EQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
SLYV +L E + S ++ S +V + LGY Y+ +++ ++A
Sbjct: 84 SLYVSNLPKENFFDLDFFKLFTSHGFRLKSAKVVLHKRTSKPLGYGYLQFNSKEEADRCL 143
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGY---GNVFIKNLDTSIDNKALCDTFAAFGTVL 143
+ +N +NG+ +RI++S + K Y N+ +KNLD + + L D+F FG +
Sbjct: 144 QDMNNYVLNGQALRIVHS-----VSKFDYNPKANLLVKNLDKEVTQQELFDSFKQFGDIQ 198
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRR--QERAQQN 201
S K+ +G S+GY F+QF++EE A+ A+ +N I K++ + ++ +E QQ
Sbjct: 199 SLKLETYPDGSSRGYAFIQFQSEEEAEKALNAMNQAEIKGKKIEINRHEKKATRENPQQT 258
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
KF N++V NL + D+ LK +FG FG I S V +D G + +G+V F+ PD A
Sbjct: 259 ---KFNNLFVKNLPKGTDDDQLKGLFGKFGEIESVTVQRDEQGNLKDYGYVCFKEPDHAE 315
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSI 321
AAV ++N +D+ V + + + E ++ K +N+Y+K + + +
Sbjct: 316 AAVLEMNKKQIDDQFLIVNQHISKKDNEPTQGSRLN-PITQNLNKTFNSNIYIKFIPNEV 374
Query: 322 NDEKLKELFS-EFGTITSCKV 341
+E+L++ FS + I S K+
Sbjct: 375 TEEELRKTFSMKDANIVSIKL 395
>gi|74762343|sp|Q6NV95.1|PAB1L_HUMAN RecName: Full=Putative protein PABPC1-like; AltName:
Full=Polyadenylate-binding protein pseudogene 2
gi|158258146|dbj|BAF85046.1| unnamed protein product [Homo sapiens]
Length = 269
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 128/226 (56%), Gaps = 22/226 (9%)
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
++GML+N V+VG F R + Q+ AE K+ G +S
Sbjct: 1 MDGMLLNGLNVFVGRF--RSPKEQE--------------AELGARAKESKV----GPASS 40
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D GKS+ FGFV+F+ + A++ +NG + Y+ A K+ E + +L+ K
Sbjct: 41 VKVITDEGGKSKGFGFVSFERHEDPQTAMD-VNGKEFSGNQTYICLAPKKVEEQTELKCK 99
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
FEQ + R + +GAN+ +KNLD+SI+DE+L++ FS FG I S VM++ G SK GF
Sbjct: 100 FEQMKQDRITRYQGANVCVKNLDESIDDERLQKEFSPFGIINSANVMME-GGCSKRFGFV 158
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ 401
FS PEE +A+ MNGK++ KPL+VA+AQ KE+R A Q+ Q
Sbjct: 159 CFSSPEEVAKAVTAMNGKIVASKPLHVALAQCKEQRLAHFTNQYMQ 204
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 97/202 (48%), Gaps = 19/202 (9%)
Query: 117 NVFIKNLDTSIDNKALCDTFAA---FGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAI 173
NVF+ + + +A A G S KV D G+SKG+GFV FE E Q A+
Sbjct: 10 NVFVGRFRSPKEQEAELGARAKESKVGPASSVKVITDEGGKSKGFGFVSFERHEDPQTAM 69
Query: 174 KMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF-------------TNVYVNNLAETVTD 220
+NG + Q Y+ L ++ E Q + KF NV V NL E++ D
Sbjct: 70 D-VNGKEFSGNQTYICLAPKKVEE-QTELKCKFEQMKQDRITRYQGANVCVKNLDESIDD 127
Query: 221 EDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVG 280
E L+K F FG I SA VM + G S+ FGFV F SP+ A AV +NG K +V
Sbjct: 128 ERLQKEFSPFGIINSANVMMEG-GCSKRFGFVCFSSPEEVAKAVTAMNGKIVASKPLHVA 186
Query: 281 RAQKRAEREADLRAKFEQERIS 302
AQ + +R A ++ Q+ S
Sbjct: 187 LAQCKEQRLAHFTNQYMQKMAS 208
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 36/189 (19%)
Query: 49 SQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPI--------- 99
S+V SV+V D+ +S G+ +V++ +D A M +NGK
Sbjct: 33 SKVGPASSVKVITDEGGKSK-GFGFVSFERHEDPQTA------MDVNGKEFSGNQTYICL 85
Query: 100 -------------RIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
+ +D R G NV +KNLD SID++ L F+ FG + S
Sbjct: 86 APKKVEEQTELKCKFEQMKQDRITRYQG-ANVCVKNLDESIDDERLQKEFSPFGIINSAN 144
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF 206
V ++ G SK +GFV F + E A+ +NG ++ K ++V L +++R F
Sbjct: 145 VMME-GGCSKRFGFVCFSSPEEVAKAVTAMNGKIVASKPLHVALAQCKEQRLAH-----F 198
Query: 207 TNVYVNNLA 215
TN Y+ +A
Sbjct: 199 TNQYMQKMA 207
>gi|376335365|gb|AFB32372.1| hypothetical protein 0_12329_02, partial [Abies alba]
gi|376335367|gb|AFB32373.1| hypothetical protein 0_12329_02, partial [Abies alba]
gi|376335369|gb|AFB32374.1| hypothetical protein 0_12329_02, partial [Abies alba]
Length = 102
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 85/102 (83%), Gaps = 4/102 (3%)
Query: 369 EMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHHGAPRLGP 427
EMNGKM+GRKPLYVA+AQRKEER+ARLQAQFAQ+RAP G++P L + YH GAPRL P
Sbjct: 1 EMNGKMVGRKPLYVALAQRKEERRARLQAQFAQMRAPIGVTPALPISLSAYHPGAPRLAP 60
Query: 428 QQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPG---GPNYIM 466
QQL+YGQG GL+PPQ AG+G+QQQ+ PG+RPG PN+++
Sbjct: 61 QQLFYGQGPHGLIPPQPAGFGYQQQLLPGIRPGMAXXPNFLL 102
>gi|361067029|gb|AEW07826.1| Pinus taeda anonymous locus 0_12329_02 genomic sequence
gi|376335371|gb|AFB32375.1| hypothetical protein 0_12329_02, partial [Pinus cembra]
gi|376335373|gb|AFB32376.1| hypothetical protein 0_12329_02, partial [Pinus cembra]
gi|376335375|gb|AFB32377.1| hypothetical protein 0_12329_02, partial [Pinus cembra]
gi|376335377|gb|AFB32378.1| hypothetical protein 0_12329_02, partial [Pinus cembra]
gi|376335379|gb|AFB32379.1| hypothetical protein 0_12329_02, partial [Pinus cembra]
Length = 103
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/103 (67%), Positives = 87/103 (84%), Gaps = 5/103 (4%)
Query: 369 EMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHH-GAPRLG 426
EMNGKM+GRKPLYVA+AQRKEER+ARLQAQFAQ+RAP ++P L + + YHH GAPRL
Sbjct: 1 EMNGKMVGRKPLYVALAQRKEERRARLQAQFAQMRAPITVTPALPTNLSAYHHPGAPRLA 60
Query: 427 PQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPG---GPNYIM 466
PQQL+YGQG GL+PPQAAG+G+QQQ+ PG+RPG PN+++
Sbjct: 61 PQQLFYGQGPHGLIPPQAAGFGYQQQLLPGIRPGMAQMPNFLL 103
>gi|361067031|gb|AEW07827.1| Pinus taeda anonymous locus 0_12329_02 genomic sequence
gi|376335381|gb|AFB32380.1| hypothetical protein 0_12329_02, partial [Pinus mugo]
gi|376335383|gb|AFB32381.1| hypothetical protein 0_12329_02, partial [Pinus mugo]
gi|383170822|gb|AFG68672.1| Pinus taeda anonymous locus 0_12329_02 genomic sequence
gi|383170823|gb|AFG68673.1| Pinus taeda anonymous locus 0_12329_02 genomic sequence
gi|383170824|gb|AFG68674.1| Pinus taeda anonymous locus 0_12329_02 genomic sequence
Length = 103
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/103 (66%), Positives = 86/103 (83%), Gaps = 5/103 (4%)
Query: 369 EMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSP-LASGIPGYHH-GAPRLG 426
EMNGKM+GRKPLYVA+AQRKEER+ARLQAQFAQ+RAP ++P L + + YHH GAPRL
Sbjct: 1 EMNGKMVGRKPLYVALAQRKEERRARLQAQFAQMRAPITVTPALPTSLSAYHHPGAPRLA 60
Query: 427 PQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPG---GPNYIM 466
PQQL+YGQG GL+PPQ AG+G+QQQ+ PG+RPG PN+++
Sbjct: 61 PQQLFYGQGPHGLIPPQPAGFGYQQQLLPGIRPGMAQMPNFLL 103
>gi|14571727|emb|CAC42820.1| Poly(A)-binding protein cytoplasmic 5 [Mus musculus]
Length = 119
Score = 139 bits (349), Expect = 6e-30, Method: Composition-based stats.
Identities = 67/120 (55%), Positives = 85/120 (70%), Gaps = 1/120 (0%)
Query: 69 LGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSID 128
LGY YVN+ P DA A +NF INGKP R+M+S D +RKSG GN+FIKNLD +ID
Sbjct: 1 LGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKTID 60
Query: 129 NKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYV 188
N+AL F+AFG +LSCKV D NG SKGY +V F++ AA AI +NG+ +N++QVYV
Sbjct: 61 NRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHVNGVRLNNRQVYV 119
Score = 65.5 bits (158), Expect = 9e-08, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 17/134 (12%)
Query: 249 FGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLK 308
+G+VNF+ P A A+ +N N K + + +Q R K
Sbjct: 3 YGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPD----------------DRLRKSG 46
Query: 309 GANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALN 368
N+++KNLD +I++ L LFS FG I SCKV+ D +G SKG + F A RA+
Sbjct: 47 VGNIFIKNLDKTIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIW 105
Query: 369 EMNGKMIGRKPLYV 382
+NG + + +YV
Sbjct: 106 HVNGVRLNNRQVYV 119
Score = 57.0 bits (136), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 5/123 (4%)
Query: 157 GYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAE 216
GYG+V F A+ A+ +N LIN K + ++ + +R +++ N+++ NL +
Sbjct: 2 GYGYVNFRFPADAEWALNTMNFDLINGKPFRL-MWSQPDDRLRKS---GVGNIFIKNLDK 57
Query: 217 TVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKV 276
T+ + L +F FG I S V+ D +G S+ + +V+F S AA A+ +NG N++
Sbjct: 58 TIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHVNGVRLNNRQ 116
Query: 277 WYV 279
YV
Sbjct: 117 VYV 119
>gi|218195846|gb|EEC78273.1| hypothetical protein OsI_17967 [Oryza sativa Indica Group]
Length = 1001
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 182/376 (48%), Gaps = 36/376 (9%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
N +LYVG+L +V +L +LF Q+V RV D S GY +V YS+P+ A+ A
Sbjct: 296 NTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAI 355
Query: 87 EALNFMPINGKPIRIMYS--------HRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAA 138
+ +N + G+ + + + + PS +++ +++ NL S++ L F
Sbjct: 356 KRMNGRLVEGRALEVRVAGFPSSEDNSQQPS-KETDMAKLYVCNLSLSMNTDRLIHLFLP 414
Query: 139 FGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYV---GLFVRR 194
FG V + KVA D + G SKGYGFVQ+ + A A+ LNG L++ +++ V G+
Sbjct: 415 FGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIPSTL 474
Query: 195 QERAQQNVSPKFT-------NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKS- 246
A ++ S T N+YV N+ ++ + L ++F FG IT A V+ D D S
Sbjct: 475 PNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSA 534
Query: 247 RCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK 306
+ +GF+ F ++A A+ +NG ++ V R A L + +
Sbjct: 535 KGYGFIKFTDSESATKAIAAMNGALVGGEMIIV--------RVAGLSPSASISAVQTTQD 586
Query: 307 LKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRA 366
+ + LY+ NL S+ +K+ LF+ FG IT KV+++ ++ A +A
Sbjct: 587 INKSRLYITNLPRSMTADKMVNLFAPFGQIT--KVLMNLE-----YSLVWYADAPSAIKA 639
Query: 367 LNEMNGKMIGRKPLYV 382
+ M+G M+ K L V
Sbjct: 640 VQHMDGYMVEGKRLVV 655
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 187/424 (44%), Gaps = 34/424 (8%)
Query: 11 AAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLG 70
+AV S +T +LYV ++ +++ +L +LF ++ RV D S+ G
Sbjct: 477 SAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKG 536
Query: 71 YAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGY--------GNVFIKN 122
Y ++ +++ + A A A+N + G+ I + + PS S ++I N
Sbjct: 537 YGFIKFTDSESATKAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITN 596
Query: 123 LDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIN 182
L S+ + + FA FG + + ++ Y V + + +A A++ ++G ++
Sbjct: 597 LPRSMTADKMVNLFAPFGQITKVLMNLE-------YSLVWYADAPSAIKAVQHMDGYMVE 649
Query: 183 DKQVYVGLFVRRQERAQQNVSP---------KFTNVYVNNLAETVTDEDLKKIFGHFGTI 233
K+ L V+R E N S N+YV + ++T++ +F FG +
Sbjct: 650 GKR----LVVKRSELCTTNASQAGGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFGRV 705
Query: 234 TSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLR 293
A + + + +G V F +P AAAA++ L+G + V A AE A
Sbjct: 706 VQARMFR-----FQRYGMVRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGLPAESNAAKG 760
Query: 294 AKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH-GFSKGS 352
A Q + ++ NLY+ +L +N+E+L +LF G IT KV+V+++ G SKG
Sbjct: 761 ALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGF 820
Query: 353 GFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLA 412
GF F+ A AL MNG + L V +A + + A F + A
Sbjct: 821 GFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGVHPDAMSSYMAHFYSHFTMHDPAKAA 880
Query: 413 SGIP 416
GIP
Sbjct: 881 VGIP 884
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 303 RYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH-GFSKGSGFAAFSMPE 361
+ +++ NLY+ NL S+ KL ELF FG I +V+ D G S+G GF +S P
Sbjct: 290 KLKEVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPR 349
Query: 362 EATRALNEMNGKMIGRKPLYVAVA 385
A+ A+ MNG+++ + L V VA
Sbjct: 350 CASEAIKRMNGRLVEGRALEVRVA 373
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Query: 8 AATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRS 67
AA A+TS ++ +LYV L VN +L DLF Q+ +V ++
Sbjct: 757 AAKGALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGV 816
Query: 68 SLGYAYVNYSNPQDAANAKEALNFMPINGK--PIRIMYSHRD 107
S G+ +V +++ AA A +N P++G +RI H D
Sbjct: 817 SKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGVHPD 858
>gi|50302861|ref|XP_451368.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640499|emb|CAH02956.1| KLLA0A08338p [Kluyveromyces lactis]
Length = 766
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 178/386 (46%), Gaps = 51/386 (13%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
+L++GDL NV E L+++F++ SV++C D + + SLGY Y+N+ +P+DA NA +
Sbjct: 138 TALFIGDLPGNVTEDMLHNIFNKFKSFNSVKICVDSNTKKSLGYGYLNFGDPKDAENAVD 197
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL---DTSIDNKALCDTFAAFGTVLS 144
N+MPI G+ IR+M S R+ RK+ NVF NL +T + + D F FG +LS
Sbjct: 198 EYNYMPIFGREIRMMPSLRNTYFRKNIGTNVFFSNLPLDNTKLTTRVFYDEFKKFGKILS 257
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CK+ + K GF+ FEN+ AA+ AIK NG D + G+ R R SP
Sbjct: 258 CKL-----DRRKNIGFIYFENDAAAKEAIKQYNGKEFFDSTIMCGVHFDRNVRK----SP 308
Query: 205 KFTNVY--VNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
+F +NNL TV E L+ M+D + V +
Sbjct: 309 EFEQKINRINNL--TVVKEKLE--------------MEDDNN-------VTTDPSENGKK 345
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGAN-LYLKNLDDSI 321
V N T ++D VG A K E + + S+ KL N +++KNL +
Sbjct: 346 DVVAGNDTDDDDDDKAVGNATKSLVEETN--------KESKNTKLPHPNAIFVKNLPINP 397
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
+ + L FS+ G + S D F F + ++ A+ ++NG ++ +
Sbjct: 398 SHDNLLNFFSKIGPVKSV-YTSDVSKFDSSWAFITYKRIQDTKTAIEKLNGCKYMKRTIE 456
Query: 382 VAVAQRKEERKARLQAQFAQIRAPGG 407
V +K ER ++QF P
Sbjct: 457 V----KKTERHHLEESQFENNTRPNN 478
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 25/195 (12%)
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFGFVNFQSPDAAA 261
S K T +++ +L VT++ L IF F + S + DS+ KS +G++NF P A
Sbjct: 134 SEKQTALFIGDLPGNVTEDMLHNIFNKFKSFNSVKICVDSNTKKSLGYGYLNFGDPKDAE 193
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL---D 318
AV++ N Y+ + LR + ++ I G N++ NL +
Sbjct: 194 NAVDEYN---------YMPIFGREIRMMPSLRNTYFRKNI-------GTNVFFSNLPLDN 237
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
+ + F +FG I SCK+ K GF F A A+ + NGK
Sbjct: 238 TKLTTRVFYDEFKKFGKILSCKL-----DRRKNIGFIYFENDAAAKEAIKQYNGKEFFDS 292
Query: 379 PLYVAVAQRKEERKA 393
+ V + RK+
Sbjct: 293 TIMCGVHFDRNVRKS 307
>gi|170042459|ref|XP_001848942.1| polyadenylate-binding protein [Culex quinquefasciatus]
gi|167866018|gb|EDS29401.1| polyadenylate-binding protein [Culex quinquefasciatus]
Length = 339
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 139/261 (53%), Gaps = 39/261 (14%)
Query: 136 FAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ 195
F++ G VLSCKVA+D G SKGY FV F +A +AI +NG+ +N
Sbjct: 2 FSSVGNVLSCKVALDIQGCSKGYAFVYFYATSSAHSAIDRVNGLAVNG------------ 49
Query: 196 ERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQ 255
A VSP FT ++V N + +T L+++F +G+I + V KSR GF+ +
Sbjct: 50 --ASLAVSPLFTKLHVRNFGDRLTQTTLQELFAPYGSIKAHGV------KSRGCGFIIYD 101
Query: 256 SPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERI----SRYEKLKGAN 311
SP+AA A+E LNG +D G+A LR ER+ R + +
Sbjct: 102 SPEAAGHALEALNGKALSD-----GKA---------LRVVPVPERVLQPAPRLAEGEAVQ 147
Query: 312 LYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMN 371
++++NLD SI++ L ELF+ +G + +V + G SKG GF ++ E+A RA+ EMN
Sbjct: 148 VFVRNLDASIDNRHLGELFAPYGDVQR-GFIVKEQGKSKGFGFVTYASGEQAARAIVEMN 206
Query: 372 GKMIGRKPLYVAVAQRKEERK 392
+ + K +YV +A+ KE+ K
Sbjct: 207 DREVAGKRIYVVLARGKEKPK 227
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 145/299 (48%), Gaps = 32/299 (10%)
Query: 47 LFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHR 106
+FS V V+S +V D + S GYA+V + A +A + +N + +NG + +
Sbjct: 1 MFSSVGNVLSCKVALD-IQGCSKGYAFVYFYATSSAHSAIDRVNGLAVNGASLAV----- 54
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENE 166
P K + ++N + L + FA +G++ + V +S+G GF+ +++
Sbjct: 55 SPLFTK-----LHVRNFGDRLTQTTLQELFAPYGSIKAHGV------KSRGCGFIIYDSP 103
Query: 167 EAAQNAIKMLNGMLINDKQVY--VGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLK 224
EAA +A++ LNG ++D + V + R + A + + V+V NL ++ + L
Sbjct: 104 EAAGHALEALNGKALSDGKALRVVPVPERVLQPAPRLAEGEAVQVFVRNLDASIDNRHLG 163
Query: 225 KIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYV--GRA 282
++F +G + ++K+ GKS+ FGFV + S + AA A+ ++N K YV R
Sbjct: 164 ELFAPYGDVQRGFIVKE-QGKSKGFGFVTYASGEQAARAIVEMNDREVAGKRIYVVLARG 222
Query: 283 QKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSE--FGTITSC 339
+++ + +++ A E + +L LK + D ++LK L + + + +C
Sbjct: 223 KEKPKPVSEVDAGHEPATTT-----DDTSLLLKTITDP---DELKSLLAHQLYPLVKAC 273
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 22/213 (10%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
L+V + + ++ L +LF+ + + V S G ++ Y +P+ A +A EAL
Sbjct: 61 LHVRNFGDRLTQTTLQELFAPYGSIKAHGV-------KSRGCGFIIYDSPEAAGHALEAL 113
Query: 90 NFMPI-NGKPIRIM-----YSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
N + +GK +R++ P + + VF++NLD SIDN+ L + FA +G V
Sbjct: 114 NGKALSDGKALRVVPVPERVLQPAPRLAEGEAVQVFVRNLDASIDNRHLGELFAPYGDVQ 173
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ---- 199
+ + G+SKG+GFV + + E A AI +N + K++YV + R +E+ +
Sbjct: 174 RGFI-VKEQGKSKGFGFVTYASGEQAARAIVEMNDREVAGKRIYV-VLARGKEKPKPVSE 231
Query: 200 --QNVSPKFTNVYVNNLAETVTDED-LKKIFGH 229
P T + L +T+TD D LK + H
Sbjct: 232 VDAGHEPATTTDDTSLLLKTITDPDELKSLLAH 264
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 135/339 (39%), Gaps = 76/339 (22%)
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI-----GRKPLYVA 383
+FS G + SCKV +D G SKG F F A A++ +NG + PL+
Sbjct: 1 MFSSVGNVLSCKVALDIQGCSKGYAFVYFYATSSAHSAIDRVNGLAVNGASLAVSPLFTK 60
Query: 384 VAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQ 443
+ R + Q ++ AP G HG G + Y P+
Sbjct: 61 LHVRNFGDRLT-QTTLQELFAPYGSIKA--------HGVKSRGCGFIIYDS-------PE 104
Query: 444 AAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQG 503
AAG+ + L G ++P +R + P R G Q+ F+RN +
Sbjct: 105 AAGHALEALNGKALSDGKALRVVPVP-ERVLQPAPRLA---EGEAVQV----FVRNLDAS 156
Query: 504 I--RYL--------DNARN------------------GTDQSVVSMVPV-PFEVSG---- 530
I R+L D R +Q+ ++V + EV+G
Sbjct: 157 IDNRHLGELFAPYGDVQRGFIVKEQGKSKGFGFVTYASGEQAARAIVEMNDREVAGKRIY 216
Query: 531 -MPATPVETPRPV--------PVPISTLTSALAS--ASPDDRTRMLGEQLYPLVE-NIEP 578
+ A E P+PV P + TS L PD+ +L QLYPLV+ +
Sbjct: 217 VVLARGKEKPKPVSEVDAGHEPATTTDDTSLLLKTITDPDELKSLLAHQLYPLVKACVNA 276
Query: 579 VHASKVT-GMLLEMDQTEVLHLIESPEALKTKVAEAMAV 616
A ++T M+ + ++++ L++ P+ L+T VA+++A+
Sbjct: 277 QTAGRITFQMVRQHSASDLVALLKDPKRLQT-VAKSVAI 314
>gi|123446312|ref|XP_001311908.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121893735|gb|EAX98978.1| hypothetical protein TVAG_431870 [Trichomonas vaginalis G3]
Length = 574
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 148/277 (53%), Gaps = 19/277 (6%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
++V +L V L LFS+ V++V + ++ + YA+V+++ ++A A
Sbjct: 16 IHVANLPPTVTVEFLKSLFSEAGTVINVIL----KQKPTSCYAFVDFTLQEEAETAVRDF 71
Query: 90 NFMPINGKPIRIMYSHRDPSIR--KSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
N+ +NG+ I I+ P + SG GN+FIK LD SID L + FA +G ++SC++
Sbjct: 72 NYTKLNGETI-IVTRTTAPVVSAISSGQGNLFIKGLDESIDCLQLHELFANYGEIVSCRI 130
Query: 148 AIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA-----QQNV 202
NGQ +G+G+VQF +E A++A+K L +N K + +G F++R ER Q N+
Sbjct: 131 PT-LNGQPRGFGYVQFLKQEDAEHAMKELADSTVNGKPIQIGPFLKRSERPLSAAFQNNL 189
Query: 203 SPKFTNVYVNNLAETV-TDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAA 261
FTNV+V NL + + T L ++F FG +TSA ++ + R G+V +AA
Sbjct: 190 DSSFTNVFVKNLPDNINTLLSLLRLFHEFGDVTSARIVPE-----RHIGYVMMSEHEAAV 244
Query: 262 AAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
AV L G T K V R+ AER ++ E+
Sbjct: 245 RAVVGLCGRTIFGKRLSVCRSLSPAERANFIKKPIEE 281
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 137/290 (47%), Gaps = 20/290 (6%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLN 177
+ + NL ++ + L F+ GTV++ I + Y FV F +E A+ A++ N
Sbjct: 16 IHVANLPPTVTVEFLKSLFSEAGTVIN---VILKQKPTSCYAFVDFTLQEEAETAVRDFN 72
Query: 178 GMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAI 237
+N + + V R +S N+++ L E++ L ++F ++G I S
Sbjct: 73 YTKLNGETIIV---TRTTAPVVSAISSGQGNLFIKGLDESIDCLQLHELFANYGEIVSCR 129
Query: 238 VMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
+ +G+ R FG+V F + A A+++L +T N K +G KR+ER L A F+
Sbjct: 130 I-PTLNGQPRGFGYVQFLKQEDAEHAMKELADSTVNGKPIQIGPFLKRSERP--LSAAFQ 186
Query: 298 QERISRYEKLKGANLYLKNLDDSINDE-KLKELFSEFGTITSCKVMVDQHGFSKGSGFAA 356
S + N+++KNL D+IN L LF EFG +TS +++ ++H G+
Sbjct: 187 NNLDSSF-----TNVFVKNLPDNINTLLSLLRLFHEFGDVTSARIVPERH-----IGYVM 236
Query: 357 FSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPG 406
S E A RA+ + G+ I K L V + ER ++ ++ P
Sbjct: 237 MSEHEAAVRAVVGLCGRTIFGKRLSVCRSLSPAERANFIKKPIEEVDLPA 286
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 19/188 (10%)
Query: 204 PKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAA 263
PK ++V NL TVT E LK +F GT+ + I+ + + C+ FV+F + A A
Sbjct: 11 PKENGIHVANLPPTVTVEFLKSLFSEAGTVINVILKQKP---TSCYAFVDFTLQEEAETA 67
Query: 264 VEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIND 323
V N T N + V R +S +G NL++K LD+SI+
Sbjct: 68 VRDFNYTKLNGETIIVTRTTAPV--------------VSAISSGQG-NLFIKGLDESIDC 112
Query: 324 EKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVA 383
+L ELF+ +G I SC++ +G +G G+ F E+A A+ E+ + KP+ +
Sbjct: 113 LQLHELFANYGEIVSCRIPT-LNGQPRGFGYVQFLKQEDAEHAMKELADSTVNGKPIQIG 171
Query: 384 VAQRKEER 391
++ ER
Sbjct: 172 PFLKRSER 179
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 5 GAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQS 64
G T+ +A+ SG GN L++ L+++++ QL++LF+ ++VS R+
Sbjct: 78 GETIIVTRTTAPVVSAISSGQGN--LFIKGLDESIDCLQLHELFANYGEIVSCRIPTLNG 135
Query: 65 KRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRI----MYSHRDPSIR-----KSGY 115
+ G+ YV + +DA +A + L +NGKPI+I S R S S +
Sbjct: 136 QPR--GFGYVQFLKQEDAEHAMKELADSTVNGKPIQIGPFLKRSERPLSAAFQNNLDSSF 193
Query: 116 GNVFIKNLDTSIDN-KALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIK 174
NVF+KNL +I+ +L F FG V S ++ + + G+V EAA A+
Sbjct: 194 TNVFVKNLPDNINTLLSLLRLFHEFGDVTSARIVPE-----RHIGYVMMSEHEAAVRAVV 248
Query: 175 MLNGMLINDKQVYVGLFVRRQERA 198
L G I K++ V + ERA
Sbjct: 249 GLCGRTIFGKRLSVCRSLSPAERA 272
>gi|90399074|emb|CAJ86296.1| H0124B04.13 [Oryza sativa Indica Group]
Length = 913
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 182/376 (48%), Gaps = 36/376 (9%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
N +LYVG+L +V +L +LF Q+V RV D S GY +V YS+P+ A+ A
Sbjct: 208 NTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAI 267
Query: 87 EALNFMPINGKPIRIMYS--------HRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAA 138
+ +N + G+ + + + + PS +++ +++ NL S++ L F
Sbjct: 268 KRMNGRLVEGRALEVRVAGFPSSEDNSQQPS-KETDMAKLYVCNLSLSMNTDRLIHLFLP 326
Query: 139 FGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYV---GLFVRR 194
FG V + KVA D + G SKGYGFVQ+ + A A+ LNG L++ +++ V G+
Sbjct: 327 FGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIPSTL 386
Query: 195 QERAQQNVSPKFT-------NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKS- 246
A ++ S T N+YV N+ ++ + L ++F FG IT A V+ D D S
Sbjct: 387 PNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSA 446
Query: 247 RCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK 306
+ +GF+ F ++A A+ +NG ++ V R A L + +
Sbjct: 447 KGYGFIKFTDSESATKAIAAMNGALVGGEMIIV--------RVAGLSPSASISAVQTTQD 498
Query: 307 LKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRA 366
+ + LY+ NL S+ +K+ LF+ FG IT KV+++ ++ A +A
Sbjct: 499 INKSRLYITNLPRSMTADKMVNLFAPFGQIT--KVLMNLE-----YSLVWYADAPSAIKA 551
Query: 367 LNEMNGKMIGRKPLYV 382
+ M+G M+ K L V
Sbjct: 552 VQHMDGYMVEGKRLVV 567
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 187/424 (44%), Gaps = 34/424 (8%)
Query: 11 AAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLG 70
+AV S +T +LYV ++ +++ +L +LF ++ RV D S+ G
Sbjct: 389 SAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKG 448
Query: 71 YAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGY--------GNVFIKN 122
Y ++ +++ + A A A+N + G+ I + + PS S ++I N
Sbjct: 449 YGFIKFTDSESATKAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITN 508
Query: 123 LDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIN 182
L S+ + + FA FG + + ++ Y V + + +A A++ ++G ++
Sbjct: 509 LPRSMTADKMVNLFAPFGQITKVLMNLE-------YSLVWYADAPSAIKAVQHMDGYMVE 561
Query: 183 DKQVYVGLFVRRQERAQQNVSP---------KFTNVYVNNLAETVTDEDLKKIFGHFGTI 233
K+ L V+R E N S N+YV + ++T++ +F FG +
Sbjct: 562 GKR----LVVKRSELCTTNASQAGGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFGRV 617
Query: 234 TSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLR 293
A + + + +G V F +P AAAA++ L+G + V A AE A
Sbjct: 618 VQARMFR-----FQRYGMVRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGLPAESNAAKG 672
Query: 294 AKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH-GFSKGS 352
A Q + ++ NLY+ +L +N+E+L +LF G IT KV+V+++ G SKG
Sbjct: 673 ALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGF 732
Query: 353 GFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLA 412
GF F+ A AL MNG + L V +A + + A F + A
Sbjct: 733 GFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGVHPDAMSSYMAHFYSHFTMHDPAKAA 792
Query: 413 SGIP 416
GIP
Sbjct: 793 VGIP 796
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 303 RYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH-GFSKGSGFAAFSMPE 361
+ +++ NLY+ NL S+ KL ELF FG I +V+ D G S+G GF +S P
Sbjct: 202 KLKEVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPR 261
Query: 362 EATRALNEMNGKMIGRKPLYVAVA 385
A+ A+ MNG+++ + L V VA
Sbjct: 262 CASEAIKRMNGRLVEGRALEVRVA 285
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Query: 8 AATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRS 67
AA A+TS ++ +LYV L VN +L DLF Q+ +V ++
Sbjct: 669 AAKGALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGV 728
Query: 68 SLGYAYVNYSNPQDAANAKEALNFMPINGK--PIRIMYSHRD 107
S G+ +V +++ AA A +N P++G +RI H D
Sbjct: 729 SKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGVHPD 770
>gi|115461392|ref|NP_001054296.1| Os04g0682400 [Oryza sativa Japonica Group]
gi|113565867|dbj|BAF16210.1| Os04g0682400 [Oryza sativa Japonica Group]
Length = 1008
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 181/387 (46%), Gaps = 47/387 (12%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
N +LYVG+L +V +L +LF Q+V RV D S GY +V YS+P+ A+ A
Sbjct: 292 NTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAI 351
Query: 87 EALNFMPINGKPIRIMYS--------HRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAA 138
+ +N + G +++ + + PS +++ +++ NL S++ L F
Sbjct: 352 KRMNGRLVEGTALKVRVTGFPSSEDNSQQPS-KETDMAKLYVCNLSLSMNTDRLIHLFLP 410
Query: 139 FGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYV--------- 188
FG V + KVA D + G SKGYGFVQ+ + A A+ LNG L++ +++ V
Sbjct: 411 FGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIPSTL 470
Query: 189 ---GLFVRRQERAQQNVSPKFT---------NVYVNNLAETVTDEDLKKIFGHFGTITSA 236
+ R SP T N+YV N+ ++ + L ++F FG IT A
Sbjct: 471 PNSAVESPSTTRNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHA 530
Query: 237 IVMKDSDGKS-RCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D D S + +GF+ F ++A A+ +NG ++ V R A L
Sbjct: 531 RVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMIIV--------RVAGLSPS 582
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ + + + LY+ NL S+ +K+ LF+ FG IT KV+++
Sbjct: 583 ASISAVQTTQDINKSRLYITNLPRSMTADKMVNLFAPFGQIT--KVLMNLE-----YSLV 635
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYV 382
++ AT+A+ M+G M+ K L V
Sbjct: 636 WYADAPSATKAVQHMDGYMVEGKRLVV 662
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 187/424 (44%), Gaps = 34/424 (8%)
Query: 11 AAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLG 70
+AV S +T +LYV ++ +++ +L +LF ++ RV D S+ G
Sbjct: 484 SAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKG 543
Query: 71 YAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGY--------GNVFIKN 122
Y ++ +++ + A A A+N + G+ I + + PS S ++I N
Sbjct: 544 YGFIKFTDSESATKAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITN 603
Query: 123 LDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIN 182
L S+ + + FA FG + + ++ Y V + + +A A++ ++G ++
Sbjct: 604 LPRSMTADKMVNLFAPFGQITKVLMNLE-------YSLVWYADAPSATKAVQHMDGYMVE 656
Query: 183 DKQVYVGLFVRRQERAQQNVSP---------KFTNVYVNNLAETVTDEDLKKIFGHFGTI 233
K+ L V+R E N S N+YV + ++T++ +F FG +
Sbjct: 657 GKR----LVVKRSELCTTNASQAGGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFGRV 712
Query: 234 TSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLR 293
A + + + +G V F +P AAAA++ L+G + V A AE A
Sbjct: 713 VQARMFR-----FQRYGMVRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGLPAESNAAKG 767
Query: 294 AKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH-GFSKGS 352
A Q + ++ NLY+ +L +N+E+L +LF G IT KV+V+++ G SKG
Sbjct: 768 ALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGF 827
Query: 353 GFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLA 412
GF F+ A AL MNG + L V +A + + A F + A
Sbjct: 828 GFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGVHPDAMSSYMAHFYSHFTMHDPAKAA 887
Query: 413 SGIP 416
GIP
Sbjct: 888 VGIP 891
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 303 RYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH-GFSKGSGFAAFSMPE 361
+ +++ NLY+ NL S+ KL ELF FG I +V+ D G S+G GF +S P
Sbjct: 286 KLKEVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPR 345
Query: 362 EATRALNEMNGKMIGRKPLYVAV 384
A+ A+ MNG+++ L V V
Sbjct: 346 CASEAIKRMNGRLVEGTALKVRV 368
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Query: 8 AATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRS 67
AA A+TS ++ +LYV L VN +L DLF Q+ +V ++
Sbjct: 764 AAKGALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGV 823
Query: 68 SLGYAYVNYSNPQDAANAKEALNFMPINGK--PIRIMYSHRD 107
S G+ +V +++ AA A +N P++G +RI H D
Sbjct: 824 SKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGVHPD 865
>gi|222629794|gb|EEE61926.1| hypothetical protein OsJ_16667 [Oryza sativa Japonica Group]
Length = 1011
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 181/387 (46%), Gaps = 47/387 (12%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
N +LYVG+L +V +L +LF Q+V RV D S GY +V YS+P+ A+ A
Sbjct: 295 NTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAI 354
Query: 87 EALNFMPINGKPIRIMYS--------HRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAA 138
+ +N + G+ + + + + PS +++ +++ NL S++ L F
Sbjct: 355 KRMNGRLVEGRALEVRVAGFPSSEDNSQQPS-KETDMAKLYVCNLSLSMNTDRLIHLFLP 413
Query: 139 FGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYV--------- 188
FG V + KVA D + G SKGYGFVQ+ + A A+ LNG L++ +++ V
Sbjct: 414 FGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIPSTL 473
Query: 189 ---GLFVRRQERAQQNVSPKFT---------NVYVNNLAETVTDEDLKKIFGHFGTITSA 236
+ R SP T N+YV N+ ++ + L ++F FG IT A
Sbjct: 474 PNSAVESPSTTRNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHA 533
Query: 237 IVMKDSDGKS-RCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D D S + +GF+ F ++A A+ +NG ++ V R A L
Sbjct: 534 RVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMIIV--------RVAGLSPS 585
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ + + + LY+ NL S+ +K+ LF+ FG IT KV+++
Sbjct: 586 ASISAVQTTQDINKSRLYITNLPRSMTADKMVNLFAPFGQIT--KVLMNLE-----YSLV 638
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYV 382
++ AT+A+ M+G M+ K L V
Sbjct: 639 WYADAPSATKAVQHMDGYMVEGKRLVV 665
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 187/424 (44%), Gaps = 34/424 (8%)
Query: 11 AAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLG 70
+AV S +T +LYV ++ +++ +L +LF ++ RV D S+ G
Sbjct: 487 SAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKG 546
Query: 71 YAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGY--------GNVFIKN 122
Y ++ +++ + A A A+N + G+ I + + PS S ++I N
Sbjct: 547 YGFIKFTDSESATKAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITN 606
Query: 123 LDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIN 182
L S+ + + FA FG + + ++ Y V + + +A A++ ++G ++
Sbjct: 607 LPRSMTADKMVNLFAPFGQITKVLMNLE-------YSLVWYADAPSATKAVQHMDGYMVE 659
Query: 183 DKQVYVGLFVRRQERAQQNVSP---------KFTNVYVNNLAETVTDEDLKKIFGHFGTI 233
K+ L V+R E N S N+YV + ++T++ +F FG +
Sbjct: 660 GKR----LVVKRSELCTTNASQAGGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFGRV 715
Query: 234 TSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLR 293
A + + + +G V F +P AAAA++ L+G + V A AE A
Sbjct: 716 VQARMFR-----FQRYGMVRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGLPAESNAAKG 770
Query: 294 AKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH-GFSKGS 352
A Q + ++ NLY+ +L +N+E+L +LF G IT KV+V+++ G SKG
Sbjct: 771 ALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGF 830
Query: 353 GFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLA 412
GF F+ A AL MNG + L V +A + + A F + A
Sbjct: 831 GFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGVHPDAMSSYMAHFYSHFTMHDPAKAA 890
Query: 413 SGIP 416
GIP
Sbjct: 891 VGIP 894
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 303 RYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH-GFSKGSGFAAFSMPE 361
+ +++ NLY+ NL S+ KL ELF FG I +V+ D G S+G GF +S P
Sbjct: 289 KLKEVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPR 348
Query: 362 EATRALNEMNGKMIGRKPLYVAVA 385
A+ A+ MNG+++ + L V VA
Sbjct: 349 CASEAIKRMNGRLVEGRALEVRVA 372
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Query: 8 AATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRS 67
AA A+TS ++ +LYV L VN +L DLF Q+ +V ++
Sbjct: 767 AAKGALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGV 826
Query: 68 SLGYAYVNYSNPQDAANAKEALNFMPINGK--PIRIMYSHRD 107
S G+ +V +++ AA A +N P++G +RI H D
Sbjct: 827 SKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGVHPD 868
>gi|320581163|gb|EFW95384.1| poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 716
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 188/397 (47%), Gaps = 50/397 (12%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SL+VGDL+++++E L ++F++ ++SV++ D +SLGY YVNYSN A A E+
Sbjct: 181 SLFVGDLDKSLSELDLKNVFNKYPGLLSVKIPADCQTGNSLGYGYVNYSNEDQANFAMES 240
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
LN+ I IRIM S RD S R+ NVF+ NL + + + L D F G VLSCK
Sbjct: 241 LNYTTIGSSEIRIMPSLRDKSQRERIGANVFLSNLSSHLTTRQLYDRFRKHGNVLSCKY- 299
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER----------- 197
SK F+ FE++E A +K N ++ + VYVGL + +++R
Sbjct: 300 ----DSSKQQAFIHFESKEVAYEVVKTYNHTTLDGRLVYVGLHILKKDRELFGATASASS 355
Query: 198 ---AQQNV------SPKFTN------------VYVNNLAETVTDEDLKKIFGHFGTITSA 236
++++ SP F N ++V NL + + +K + +G + S
Sbjct: 356 KLTEKRDISQIPTFSPTFQNTKHKNDISTHYSIFVRNLPLNIEEHVIKSLVEPYGPVLSV 415
Query: 237 IVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKF 296
+ K K+ C+ V + ++ AV LN N + +V RA + E+ +
Sbjct: 416 LARK-VPKKNGCWALVTLSNQESVDKAVSHLNMVEINKQQLFVTRAIPKEEKSYSRK--- 471
Query: 297 EQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAA 356
QE +Y KLK + + L+ + + +K + FG+I S + + + G+ A
Sbjct: 472 -QEVQPKY-KLK---ILITGLNVNTHKDKFQNWCLTFGSIKSVE-LYGTYPQENKKGYTA 525
Query: 357 FSMPEEATRALNEM---NGKMIGRKPLYVAVAQRKEE 390
+ E A ++ N K++G + V V + +E
Sbjct: 526 YGYVEMVNEADADVLIDNLKLLGVRCFKVKVEIQDKE 562
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 146/309 (47%), Gaps = 37/309 (11%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKM 175
++F+ +LD S+ L + F + +LS K+ D G S GYG+V + NE+ A A++
Sbjct: 181 SLFVGDLDKSLSELDLKNVFNKYPGLLSVKIPADCQTGNSLGYGYVNYSNEDQANFAMES 240
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LN I ++ + +R + + ++ + NV+++NL+ +T L F G + S
Sbjct: 241 LNYTTIGSSEIRIMPSLRDKSQRERIGA----NVFLSNLSSHLTTRQLYDRFRKHGNVLS 296
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAERE-----A 290
DS S+ F++F+S + A V+ N TT + ++ YVG + +RE A
Sbjct: 297 C--KYDS---SKQQAFIHFESKEVAYEVVKTYNHTTLDGRLVYVGLHILKKDRELFGATA 351
Query: 291 DLRAKFEQER-ISR-------YEKLKGAN-------LYLKNLDDSINDEKLKELFSEFGT 335
+K ++R IS+ ++ K N ++++NL +I + +K L +G
Sbjct: 352 SASSKLTEKRDISQIPTFSPTFQNTKHKNDISTHYSIFVRNLPLNIEEHVIKSLVEPYGP 411
Query: 336 ITSCKVMVDQHGFSKGS-GFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEE---- 390
+ S V+ + G S E +A++ +N I ++ L+V A KEE
Sbjct: 412 VLS--VLARKVPKKNGCWALVTLSNQESVDKAVSHLNMVEINKQQLFVTRAIPKEEKSYS 469
Query: 391 RKARLQAQF 399
RK +Q ++
Sbjct: 470 RKQEVQPKY 478
>gi|38345560|emb|CAE03434.2| OSJNBa0032F06.17 [Oryza sativa Japonica Group]
Length = 924
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 181/387 (46%), Gaps = 47/387 (12%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
N +LYVG+L +V +L +LF Q+V RV D S GY +V YS+P+ A+ A
Sbjct: 208 NTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAI 267
Query: 87 EALNFMPINGKPIRIMYS--------HRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAA 138
+ +N + G +++ + + PS +++ +++ NL S++ L F
Sbjct: 268 KRMNGRLVEGTALKVRVTGFPSSEDNSQQPS-KETDMAKLYVCNLSLSMNTDRLIHLFLP 326
Query: 139 FGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYV--------- 188
FG V + KVA D + G SKGYGFVQ+ + A A+ LNG L++ +++ V
Sbjct: 327 FGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIPSTL 386
Query: 189 ---GLFVRRQERAQQNVSPKFT---------NVYVNNLAETVTDEDLKKIFGHFGTITSA 236
+ R SP T N+YV N+ ++ + L ++F FG IT A
Sbjct: 387 PNSAVESPSTTRNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHA 446
Query: 237 IVMKDSDGKS-RCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V+ D D S + +GF+ F ++A A+ +NG ++ V R A L
Sbjct: 447 RVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMIIV--------RVAGLSPS 498
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ + + + LY+ NL S+ +K+ LF+ FG IT KV+++
Sbjct: 499 ASISAVQTTQDINKSRLYITNLPRSMTADKMVNLFAPFGQIT--KVLMNLE-----YSLV 551
Query: 356 AFSMPEEATRALNEMNGKMIGRKPLYV 382
++ AT+A+ M+G M+ K L V
Sbjct: 552 WYADAPSATKAVQHMDGYMVEGKRLVV 578
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 187/424 (44%), Gaps = 34/424 (8%)
Query: 11 AAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLG 70
+AV S +T +LYV ++ +++ +L +LF ++ RV D S+ G
Sbjct: 400 SAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKG 459
Query: 71 YAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGY--------GNVFIKN 122
Y ++ +++ + A A A+N + G+ I + + PS S ++I N
Sbjct: 460 YGFIKFTDSESATKAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITN 519
Query: 123 LDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIN 182
L S+ + + FA FG + + ++ Y V + + +A A++ ++G ++
Sbjct: 520 LPRSMTADKMVNLFAPFGQITKVLMNLE-------YSLVWYADAPSATKAVQHMDGYMVE 572
Query: 183 DKQVYVGLFVRRQERAQQNVSP---------KFTNVYVNNLAETVTDEDLKKIFGHFGTI 233
K+ L V+R E N S N+YV + ++T++ +F FG +
Sbjct: 573 GKR----LVVKRSELCTTNASQAGGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFGRV 628
Query: 234 TSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLR 293
A + + + +G V F +P AAAA++ L+G + V A AE A
Sbjct: 629 VQARMFR-----FQRYGMVRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGLPAESNAAKG 683
Query: 294 AKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH-GFSKGS 352
A Q + ++ NLY+ +L +N+E+L +LF G IT KV+V+++ G SKG
Sbjct: 684 ALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGF 743
Query: 353 GFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLA 412
GF F+ A AL MNG + L V +A + + A F + A
Sbjct: 744 GFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGVHPDAMSSYMAHFYSHFTMHDPAKAA 803
Query: 413 SGIP 416
GIP
Sbjct: 804 VGIP 807
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 303 RYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH-GFSKGSGFAAFSMPE 361
+ +++ NLY+ NL S+ KL ELF FG I +V+ D G S+G GF +S P
Sbjct: 202 KLKEVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPR 261
Query: 362 EATRALNEMNGKMIGRKPLYVAV 384
A+ A+ MNG+++ L V V
Sbjct: 262 CASEAIKRMNGRLVEGTALKVRV 284
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Query: 8 AATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRS 67
AA A+TS ++ +LYV L VN +L DLF Q+ +V ++
Sbjct: 680 AAKGALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGV 739
Query: 68 SLGYAYVNYSNPQDAANAKEALNFMPINGK--PIRIMYSHRD 107
S G+ +V +++ AA A +N P++G +RI H D
Sbjct: 740 SKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGVHPD 781
>gi|320581035|gb|EFW95257.1| polyadenylate-binding protein [Ogataea parapolymorpha DL-1]
Length = 541
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 171/360 (47%), Gaps = 64/360 (17%)
Query: 101 IMYSH--RDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGY 158
I Y H + ++K GN++++ L + + L F+ +G ++SCK+ D G SKGY
Sbjct: 78 IEYEHVATEHELKKQLPGNLYVRGLLPTTTSDDLVRIFSRYGALVSCKIIYDDFGVSKGY 137
Query: 159 GFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ--QNVSPKFTNVYVNNLAE 216
GF+ F + AQ AI LNG+ ++ ++V + +++R + + K+TN+YV N +
Sbjct: 138 GFINFADRIEAQKAIDNLNGVNVDGNHLFVNHHISKRDRLKELEMRKLKYTNLYVKNFPD 197
Query: 217 TVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNG-TTNNDK 275
+T E L ++FG +G + S + + + +R + F+NF+S + A A E L+G
Sbjct: 198 DLTKEKLAQVFGQYGDVESVFLPQGTGNHNRGYAFINFKSHEDAVRAQENLDGFEIAPGY 257
Query: 276 VWYVGRAQKRAER--------------------------EADLRAKF----EQERISRYE 305
+G+A++R +R +L F + IS
Sbjct: 258 RLQLGKAERRKDRMQNQMNSYKPNYLPFQPQYMPPQPEHSNNLYPSFIVSPDSNLISTAT 317
Query: 306 KL-------KGANLYLKNLDDSINDEKLKELFSEFGTITSCKVM---------VDQ---- 345
L + +NLY+ +L D+ L ELF+ FG I S K+M +D+
Sbjct: 318 GLPIAGPQYQDSNLYIIHLPLEFKDQDLYELFAPFGQIMSAKIMTYPPNDSAVIDEGEED 377
Query: 346 ------HGFSKGSGFAAFSMPEEATRALNEMNG-KMIGRKPLYVAVAQRKEER--KARLQ 396
G S+G GF F+ P +A++AL MNG ++ L V+ AQRKE + K RL
Sbjct: 378 TESKSREGRSRGFGFVCFNKPLDASKALVSMNGYRVDDSHVLEVSFAQRKENKFEKGRLH 437
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 123/276 (44%), Gaps = 27/276 (9%)
Query: 128 DNKALCDTFAAFGTV-----LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIN 182
D+ L + A F ++C+V + N +S F +FE ++ + + L I
Sbjct: 21 DSAVLENLLAVFKNTYNYPEVNCEV-LKGNSESPKTVFARFEEKDHFEKFKEFLEQRDIE 79
Query: 183 DKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS 242
+ V +++Q N+YV L T T +DL +IF +G + S ++ D
Sbjct: 80 YEHVATEHELKKQLPG---------NLYVRGLLPTTTSDDLVRIFSRYGALVSCKIIYDD 130
Query: 243 DGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
G S+ +GF+NF A A++ LNG + +V + +R +L +
Sbjct: 131 FGVSKGYGFINFADRIEAQKAIDNLNGVNVDGNHLFVNHHISKRDRLKELEMR------- 183
Query: 303 RYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEE 362
KLK NLY+KN D + EKL ++F ++G + S + ++G F F E+
Sbjct: 184 ---KLKYTNLYVKNFPDDLTKEKLAQVFGQYGDVESVFLPQGTGNHNRGYAFINFKSHED 240
Query: 363 ATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQ 398
A RA ++G I P Y + E RK R+Q Q
Sbjct: 241 AVRAQENLDGFEIA--PGYRLQLGKAERRKDRMQNQ 274
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 150/361 (41%), Gaps = 84/361 (23%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
+LYV L L +FS+ +VS ++ D S GY ++N+++ +A A +
Sbjct: 96 NLYVRGLLPTTTSDDLVRIFSRYGALVSCKIIYDDFGVSK-GYGFINFADRIEAQKAIDN 154
Query: 89 LNFMPINGKPIRIMY--SHRDP----SIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
LN + ++G + + + S RD +RK Y N+++KN + + L F +G V
Sbjct: 155 LNGVNVDGNHLFVNHHISKRDRLKELEMRKLKYTNLYVKNFPDDLTKEKLAQVFGQYGDV 214
Query: 143 LSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIN-DKQVYVGLFVRRQERAQ-- 199
S + + ++GY F+ F++ E A A + L+G I ++ +G RR++R Q
Sbjct: 215 ESVFLPQGTGNHNRGYAFINFKSHEDAVRAQENLDGFEIAPGYRLQLGKAERRKDRMQNQ 274
Query: 200 -----------------------QNVSPKF------------------------TNVYVN 212
N+ P F +N+Y+
Sbjct: 275 MNSYKPNYLPFQPQYMPPQPEHSNNLYPSFIVSPDSNLISTATGLPIAGPQYQDSNLYII 334
Query: 213 NLAETVTDEDLKKIFGHFGTITSAIVM-------------------KDSDGKSRCFGFVN 253
+L D+DL ++F FG I SA +M K +G+SR FGFV
Sbjct: 335 HLPLEFKDQDLYELFAPFGQIMSAKIMTYPPNDSAVIDEGEEDTESKSREGRSRGFGFVC 394
Query: 254 FQSPDAAAAAVEKLNGTTNND-KVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANL 312
F P A+ A+ +NG +D V V AQ++ KFE+ R+ Y + N
Sbjct: 395 FNKPLDASKALVSMNGYRVDDSHVLEVSFAQRKEN-------KFEKGRLHHYNQNHLGNF 447
Query: 313 Y 313
Y
Sbjct: 448 Y 448
>gi|324525699|gb|ADY48582.1| Polyadenylate-binding protein 1, partial [Ascaris suum]
Length = 121
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 77/106 (72%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y SLYVGDL +V E+ L++ FS V+S+RVCRD R SLGYAYVN+ P DA
Sbjct: 16 YPMASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAER 75
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNK 130
A + +NF + GKPIRIM+S RDPS+R+SG GN+FIKNLD SIDNK
Sbjct: 76 ALDTMNFDVMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNK 121
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEEATRALN 368
A+LY+ +L + + L E FS G + S +V D S G + F P +A RAL+
Sbjct: 19 ASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALD 78
Query: 369 EMNGKMIGRKPLYVAVAQR 387
MN ++ KP+ + +QR
Sbjct: 79 TMNFDVMYGKPIRIMWSQR 97
>gi|403164939|ref|XP_003324991.2| hypothetical protein PGTG_06528 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165464|gb|EFP80572.2| hypothetical protein PGTG_06528 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 449
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 140/287 (48%), Gaps = 17/287 (5%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQV--VSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
S++VGDL ++ Q+ +FSQV+ + +S+R R Q+ + YAYV Y + +DA+ A
Sbjct: 174 SVFVGDLPGSITHEQIVKVFSQVSPILKISIRYPRSQAIKKLRAYAYVTYHSAEDASTAI 233
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
N GKP R++ D ++ + N+++ L S+ A DTF+ FG +LS K
Sbjct: 234 REFNQTVFEGKPCRVVRVQHD-DLKSNKEANIYVGGLPPSLTGVAFHDTFSEFGEILSSK 292
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQ----VYVGLFVRRQERAQQNV 202
+ ++ S +GF+Q+ E A+ AI+ NG ++ K + LF + +A+
Sbjct: 293 LVVNPKNVSNPFGFIQYATAEEAEIAIQKTNGATLDMKDSTRPISTSLF---EGQAKPPR 349
Query: 203 SPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAA 262
P F NVY N+ + +T + FG TS + KD+DGK GF NF + + A
Sbjct: 350 QPPFHNVYFKNIPKDITRRCFDQFCEEFGPTTSTFLKKDADGKPMGIGFANFSNTNDAVK 409
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKG 309
VE + + RA R ER +++ R+ + K +
Sbjct: 410 IVEYIRQYAPMG--LHAARAYTRGERN-----RYQSRRVPKTAKAQA 449
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 23/256 (8%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAI-----DSNGQSKGYGFVQFENEEAAQN 171
+VF+ +L SI ++ + F+ +L K++I + + + Y +V + + E A
Sbjct: 174 SVFVGDLPGSITHEQIVKVFSQVSPIL--KISIRYPRSQAIKKLRAYAYVTYHSAEDAST 231
Query: 172 AIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFG 231
AI+ N + K V VR Q + S K N+YV L ++T F FG
Sbjct: 232 AIREFNQTVFEGKPCRV---VRVQHDDLK--SNKEANIYVGGLPPSLTGVAFHDTFSEFG 286
Query: 232 TITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
I S+ ++ + S FGF+ + + + A A++K NG T + K + R
Sbjct: 287 EILSSKLVVNPKNVSNPFGFIQYATAEEAEIAIQKTNGATLD---------MKDSTRPIS 337
Query: 292 LRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKG 351
Q + R N+Y KN+ I + EFG TS + D G G
Sbjct: 338 TSLFEGQAKPPRQPPFH--NVYFKNIPKDITRRCFDQFCEEFGPTTSTFLKKDADGKPMG 395
Query: 352 SGFAAFSMPEEATRAL 367
GFA FS +A + +
Sbjct: 396 IGFANFSNTNDAVKIV 411
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 20/174 (11%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVM---KDSDGKSRCFGFVNFQSPDAAAAAV 264
+V+V +L ++T E + K+F I + + K R + +V + S + A+ A+
Sbjct: 174 SVFVGDLPGSITHEQIVKVFSQVSPILKISIRYPRSQAIKKLRAYAYVTYHSAEDASTAI 233
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
+ N T K V R Q DL++ K AN+Y+ L S+
Sbjct: 234 REFNQTVFEGKPCRVVRVQ-----HDDLKSN------------KEANIYVGGLPPSLTGV 276
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
+ FSEFG I S K++V+ S GF ++ EEA A+ + NG + K
Sbjct: 277 AFHDTFSEFGEILSSKLVVNPKNVSNPFGFIQYATAEEAEIAIQKTNGATLDMK 330
>gi|367013040|ref|XP_003681020.1| hypothetical protein TDEL_0D02250 [Torulaspora delbrueckii]
gi|359748680|emb|CCE91809.1| hypothetical protein TDEL_0D02250 [Torulaspora delbrueckii]
Length = 622
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 178/412 (43%), Gaps = 55/412 (13%)
Query: 3 ATGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRD 62
G +AA + S ++ + S V+L++GDLE +V E+ L D+F + + SV++C D
Sbjct: 73 TNGDSAANVGIKSKLSSTLESK-SVVALFIGDLEPSVTENMLRDIFGKFRSLTSVKICLD 131
Query: 63 QSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKN 122
+ SLGY Y+N++N +DA A E N+ PI G+ +RIM S R+ RK+ NVF N
Sbjct: 132 SNSGKSLGYGYLNFANSEDAEKATEEFNYRPIEGQEVRIMPSLRNSFYRKNVGTNVFFSN 191
Query: 123 L---DTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGM 179
L D+ + + DTF +G +LSCK+ + K GF+ F N+++A+ IK NG
Sbjct: 192 LPLEDSRLTTRVFYDTFKKYGKILSCKL-----DKRKDIGFIYFNNDQSARKVIKDYNGK 246
Query: 180 LINDKQVYVGLFVRRQERAQQNVSPKFTN------------------------------- 208
+V G+ + R + +N
Sbjct: 247 EFFGNKVLCGIHFDKDFRKYPEFEKRISNLDSITVAMEELTTEDSNKVVLQRDSGSQVPH 306
Query: 209 ---VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVE 265
V+V NL T+E++ F + G + S K S + FV ++ + +++
Sbjct: 307 PNAVFVKNLPMDCTNEEILDFFSNIGPVKSVFSSKAPKFNS-LWAFVTYKRGSDTSKSIQ 365
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEK 325
N ++ V +A + + + S Y+ K + + ++ +N+E
Sbjct: 366 FYNDKEFKNRRLIVSKAVPKEGK---------NQSPSNYKNYKTI-VQIDDVSPVLNEEF 415
Query: 326 LKEL-FSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG 376
L +L E I + SGF +ATR +N ++IG
Sbjct: 416 LSQLCIQERIKINKLHITSFNEKTLTYSGFIKCKTKNDATRVFASLNNRLIG 467
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 25/188 (13%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFGFVNFQSPDAAAAAVEKL 267
+++ +L +VT+ L+ IFG F ++TS + DS+ GKS +G++NF + + A A E+
Sbjct: 99 LFIGDLEPSVTENMLRDIFGKFRSLTSVKICLDSNSGKSLGYGYLNFANSEDAEKATEEF 158
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL---DDSINDE 324
N Y + LR F Y K G N++ NL D +
Sbjct: 159 N---------YRPIEGQEVRIMPSLRNSF-------YRKNVGTNVFFSNLPLEDSRLTTR 202
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
+ F ++G I SCK +D+ K GF F+ + A + + + NGK + +
Sbjct: 203 VFYDTFKKYGKILSCK--LDKR---KDIGFIYFNNDQSARKVIKDYNGKEFFGNKVLCGI 257
Query: 385 AQRKEERK 392
K+ RK
Sbjct: 258 HFDKDFRK 265
>gi|343961833|dbj|BAK62504.1| polyadenylate-binding protein 3 [Pan troglodytes]
Length = 308
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/315 (34%), Positives = 157/315 (49%), Gaps = 47/315 (14%)
Query: 347 GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ----I 402
G SKG GF FS PEEAT+A+ EMNG+++ KPLYVA+AQRKEER+A L ++ Q +
Sbjct: 5 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEYMQRMASV 64
Query: 403 RA-PGGMSP----LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGL 457
RA P +P + +P + A P Q+ + +P A + FQ + +
Sbjct: 65 RAVPNQRAPPSGYFMTAVPQTQNHAAYYPPSQITQLRPSPRWTAQGARPHPFQNKPS-AI 123
Query: 458 RPGGPNYIMPYHLQRQVH---PGQRTGVRRSGNTHQMQQPQ------FMRNSNQGIR--- 505
RPG P +P+ R P + R + + Q P+ + +R
Sbjct: 124 RPGAPR--VPFSTMRPASSQIPRVMSTQRVANTSTQTVGPRPAAAAAAAAAATPAVRTVA 181
Query: 506 ---YLDNARNGTD----QSVVSMVPVPFEVSGMPATPVETPRPVPVPISTLT-SALASAS 557
Y RN Q V+M V G TLT S LASA
Sbjct: 182 RYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQGQ---------------ETLTASRLASAP 226
Query: 558 PDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVL 617
P + +MLGE+L+PL++ + P A K+TGMLLE D +E+L+++ESPE+L++KV EA+AVL
Sbjct: 227 PQKQKQMLGERLFPLIQAMHPTLAGKITGMLLETDNSELLYMLESPESLRSKVDEAVAVL 286
Query: 618 QEAAARSDVNEKLGS 632
Q A+ + + S
Sbjct: 287 QAHQAKEATQKAVNS 301
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 244 GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERIS 302
G+S+ FGFV F SP+ A AV ++NG K YV AQ++ ER+A L ++ Q S
Sbjct: 5 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEYMQRMAS 63
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 153 GQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVN 212
G+SKG+GFV F + E A A+ +NG ++ K +YV L R++ER TN Y+
Sbjct: 5 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQA-----YLTNEYMQ 59
Query: 213 NLA 215
+A
Sbjct: 60 RMA 62
>gi|260656096|pdb|2K8G|A Chain A, Solution Structure Of Rrm2 Domain Of Pabp1
Length = 95
Score = 134 bits (336), Expect = 2e-28, Method: Composition-based stats.
Identities = 63/94 (67%), Positives = 77/94 (81%), Gaps = 1/94 (1%)
Query: 107 DPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENE 166
DPS+RKSG GN+FIKNLD SIDNKAL DTF+AFG +LSCKV D NG SKGYGFV FE +
Sbjct: 3 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQ 61
Query: 167 EAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ 200
EAA+ AI+ +NGML+ND++V+VG F R+ER +
Sbjct: 62 EAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 95
Score = 75.9 bits (185), Expect = 7e-11, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNE 369
N+++KNLD SI+++ L + FS FG I SCKV+ D++G SKG GF F E A RA+ +
Sbjct: 12 GNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEK 70
Query: 370 MNGKMIGRKPLYVAVAQRKEERKA 393
MNG ++ + ++V + ++ER+A
Sbjct: 71 MNGMLLNDRKVFVGRFKSRKEREA 94
Score = 69.7 bits (169), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
N+++ NL +++ ++ L F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+
Sbjct: 13 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKM 71
Query: 268 NGTTNNDKVWYVGRAQKRAEREAD 291
NG ND+ +VGR + R EREA+
Sbjct: 72 NGMLLNDRKVFVGRFKSRKEREAE 95
>gi|432092097|gb|ELK24806.1| Polyadenylate-binding protein 4 [Myotis davidii]
Length = 179
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 79/125 (63%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
S Y SLYV DL +V ++ LY+ FS V+S+ VC ++ SLGYAY+N+ P DA
Sbjct: 6 SSYPMASLYVADLHWDVTDAMLYEQFSPARPVLSIWVCHNKIISHSLGYAYINFQQPADA 65
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTV 142
A + +NF I GKPI IM+S RDPS+RKS GN+FIK LD SIDNKAL DTF T
Sbjct: 66 ERALDTMNFDVIKGKPIHIMWSQRDPSVRKSAVGNIFIKKLDKSIDNKALYDTFLRLETF 125
Query: 143 LSCKV 147
K
Sbjct: 126 CPVKC 130
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 310 ANLYLKNLDDSINDEKLKELFSE---FGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRA 366
A+LY+ +L + D L E FS +I C + H S G + F P +A RA
Sbjct: 11 ASLYVADLHWDVTDAMLYEQFSPARPVLSIWVCHNKIISH--SLGYAYINFQQPADAERA 68
Query: 367 LNEMNGKMIGRKPLYVAVAQR 387
L+ MN +I KP+++ +QR
Sbjct: 69 LDTMNFDVIKGKPIHIMWSQR 89
>gi|440302784|gb|ELP95091.1| polyadenylate-binding protein, cytoplasmic and nuclear, putative
[Entamoeba invadens IP1]
Length = 546
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 185/369 (50%), Gaps = 25/369 (6%)
Query: 22 PSGYGNVSLYVGDLEQNVNESQLYDLFSQV--AQVVSVRVCRDQSKRSSLGYAYVNYSNP 79
P N +++V L NV +S L + + +VVS+ V +++S + AY+N S
Sbjct: 15 PDFEDNKTIFVSGLTNNVTDSLLSSVVMEKFPTEVVSIHVTKNESHFDT-PIAYINMSTH 73
Query: 80 QDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAF 139
A LN + ++GKPI + ++ +D R N+F+KN+ S++ K L D F+A
Sbjct: 74 DAAKRVISTLNGVMVDGKPINMFWALKDFKQRTDTQTNLFVKNIKKSVNQKELQDVFSAI 133
Query: 140 GTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVG--LFVRRQER 197
G LS K++++ G+S G+G+V++ EA Q A+ + + + +G FV Q+
Sbjct: 134 GETLSVKLSLNEKGESNGFGYVKYRTLEATQAALDKSDEL-----KAKIGEETFV-VQKF 187
Query: 198 AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSA------IVMKDSDGKSRCFGF 251
+QN S K TN+YV N+ + VT+E K F FG I ++ + K GF
Sbjct: 188 EKQNKSRK-TNLYVYNIDKKVTEEQFIKYFETFGPIRKTSDKKPQVLFVSEETKDTAKGF 246
Query: 252 VNFQSPDAAAAAVEK-LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGA 310
V+F++ + AA AV N N ++ V + + ER + +AK + + + K K
Sbjct: 247 VDFENEEDAAKAVSAPKNSVLGNGEI-VVAYYKNKEERRREWKAKTAEVKANIKGKYKDF 305
Query: 311 NLYLKNLDDSINDEKLKELFSEFGTITSCKV-MVDQHGFSKGSGFAAFSMPEEATRALNE 369
NLY+ L +SI +++++E E G I S + VD+ G + ++ E A A+
Sbjct: 306 NLYVDTLKESITEKEIREGLGEEGEIYSLSIRWVDRK--PTGVAYLCYTTAEGANNAI-- 361
Query: 370 MNGKMIGRK 378
+ G +G K
Sbjct: 362 VKGTQLGWK 370
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 140/295 (47%), Gaps = 29/295 (9%)
Query: 118 VFIKNLDTSIDNKALCDT-FAAFGT-VLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKM 175
+F+ L ++ + L F T V+S V + + ++ +AA+ I
Sbjct: 23 IFVSGLTNNVTDSLLSSVVMEKFPTEVVSIHVTKNESHFDTPIAYINMSTHDAAKRVIST 82
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
LNG++++ K + +F ++ Q+ + TN++V N+ ++V ++L+ +F G S
Sbjct: 83 LNGVMVDGKPI--NMFWALKDFKQRTDTQ--TNLFVKNIKKSVNQKELQDVFSAIGETLS 138
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
+ + G+S FG+V +++ +A AA++K + + + E + K
Sbjct: 139 VKLSLNEKGESNGFGYVKYRTLEATQAALDKSD------------ELKAKIGEETFVVQK 186
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTI--TSCK----VMVDQHGFS 349
FE++ SR NLY+ N+D + +E+ + F FG I TS K + V +
Sbjct: 187 FEKQNKSR-----KTNLYVYNIDKKVTEEQFIKYFETFGPIRKTSDKKPQVLFVSEETKD 241
Query: 350 KGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRA 404
GF F E+A +A++ ++G + VA + KEER+ +A+ A+++A
Sbjct: 242 TAKGFVDFENEEDAAKAVSAPKNSVLGNGEIVVAYYKNKEERRREWKAKTAEVKA 296
>gi|62897393|dbj|BAD96637.1| PABPC4 protein variant [Homo sapiens]
Length = 371
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 78/96 (81%), Gaps = 1/96 (1%)
Query: 306 KLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATR 365
+ +G NLY+KNLDD+I+DEKL++ FS FG+ITS KVM++ G SKG GF FS PEEAT+
Sbjct: 1 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATK 59
Query: 366 ALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ 401
A+ EMNG+++G KPLYVA+AQRKEERKA L Q+ Q
Sbjct: 60 AVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQ 95
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 65/85 (76%)
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
S LA+A P ++ +MLGE+L+PL++ + A K+TGMLLE+D +E+LH++ESPE+L++KV
Sbjct: 284 SMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKV 343
Query: 611 AEAMAVLQEAAARSDVNEKLGSLAV 635
EA AVLQ A+ + +K+G++A
Sbjct: 344 DEAAAVLQAHHAKKEAAQKVGAVAA 368
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
N+Y+ NL +T+ DE L+K F FG+ITSA VM + DG+S+ FGFV F SP+ A AV ++
Sbjct: 6 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM 64
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
NG K YV AQ++ ER+A L ++ Q
Sbjct: 65 NGRIVGSKPLYVALAQRKEERKAHLTNQYMQ 95
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 62/99 (62%), Gaps = 6/99 (6%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N++IKNLD +ID++ L F+ FG++ S KV ++ +G+SKG+GFV F + E A A+ +
Sbjct: 6 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM 64
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLA 215
NG ++ K +YV L R++ER TN Y+ +A
Sbjct: 65 NGRIVGSKPLYVALAQRKEERKAH-----LTNQYMQRVA 98
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LY+ +L+ +++ +L FS + S +V + + S G+ +V +S+P++A
Sbjct: 2 YQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR--SKGFGFVCFSSPEEATK 59
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
A +N + KP+ + + R RK+ N +++ +
Sbjct: 60 AVTEMNGRIVGSKPLYVALAQRKEE-RKAHLTNQYMQRV 97
>gi|254584953|ref|XP_002498044.1| ZYRO0G00814p [Zygosaccharomyces rouxii]
gi|238940938|emb|CAR29111.1| ZYRO0G00814p [Zygosaccharomyces rouxii]
Length = 654
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 129/537 (24%), Positives = 223/537 (41%), Gaps = 86/537 (16%)
Query: 2 EATGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCR 61
E+ A + T + +V ++L++GDL++ ++E L +F + + SV+VC
Sbjct: 77 ESGVATSNTNTQNGLDSQSVIESQPTIALFIGDLDEQIDEEILIQIFKKFKSLTSVKVCT 136
Query: 62 DQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIK 121
D SLGY Y+N+S QD A E N+ PI GK +RIM S R+ RK+ N+F
Sbjct: 137 DAETGKSLGYGYLNFSRRQDTLAATEEFNYRPIFGKEVRIMPSLRNTFYRKNIGTNIFFS 196
Query: 122 NL---DTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNG 178
NL ++++ + DTF +G +LSCK+ + K GF+ F+N+ AA+ IK NG
Sbjct: 197 NLPLENSNLTTRVFYDTFKVYGNILSCKL-----DKRKNIGFIYFDNDHAARVVIKEFNG 251
Query: 179 MLINDKQVYVGL-----------FVRRQERAQQNVSPKF--------------------- 206
++ G+ F +R+ PK
Sbjct: 252 SEFFGNKILCGIHFDKELRKFPEFEKRKSSLNDITIPKEQLTLGPTDAKTVEHDSTQHLP 311
Query: 207 --TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAV 264
++V NL + D+++ F + G + S + S + FV ++ AV
Sbjct: 312 HPNAIFVKNLPPSCPDDEILDYFSNLGPVKS-VFSSTSHKYESSWAFVTYKKGSDTNKAV 370
Query: 265 EKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDE 324
+ +G + V +A+ + R + +IS Y + LYL+NL N++
Sbjct: 371 KIYHGAQFKGRKLSVIKAE--SARNGHGSYNKQSSKIS-YRPI----LYLQNLSSVCNEQ 423
Query: 325 KLKEL-FSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG------- 376
L ++ E I + + H SG+ ++A + L +N ++IG
Sbjct: 424 FLLQMCMEERIKIENLGITDFFHDSFTYSGYVKCKSKKDADKILKLLNNRLIGGCEVKIT 483
Query: 377 RKPL----------YVAVAQRKEERKARLQAQF------AQIRAPGGMSPLASGIPGYHH 420
RK L + V K + K+ + + Q+ + P+ P Y
Sbjct: 484 RKKLNNNNGNSSIPVIDVYHSKNQSKSPKHSTYNGLSKQPQVHLQSAIFPM----PIYSA 539
Query: 421 GAPRLGPQQLYYGQGTPGLMPPQAAGYGFQQQVFPGLRPGGPNYIMPYHLQRQVHPG 477
P G +YY Q P ++ P+ A + ++ L + I+ Y L+RQV G
Sbjct: 540 PTPTPGAGPMYYPQ--PMVLTPKIATFNSSKETDEQL-----SQILKY-LRRQVKKG 588
>gi|294884831|gb|ADF47427.1| poly(A) binding protein cytoplasmic-2, partial [Dugesia japonica]
Length = 309
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 87/145 (60%), Gaps = 12/145 (8%)
Query: 311 NLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEM 370
NLY+KNLDDSI+D +LK+ F FG ITS KVM D + SKG GF FS PEEAT+A+ EM
Sbjct: 1 NLYVKNLDDSIDDSRLKQEFVVFGNITSAKVMTDSNNRSKGFGFVCFSNPEEATKAVTEM 60
Query: 371 NGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMS-PLASGIPGYHHGAPRLGPQQ 429
NGK+ G KPLYVA+AQRKE+RKA L +Q+ Q P S P + G P GP
Sbjct: 61 NGKICGSKPLYVALAQRKEDRKAHLASQYMQRVNPHRSSYPNQVSVNTLISGGPPGGPSI 120
Query: 430 LYYG----QGTP-------GLMPPQ 443
L Y TP MPPQ
Sbjct: 121 LPYAFAPNASTPRVYTQSAAFMPPQ 145
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 59/92 (64%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
N+YV NL +++ D LK+ F FG ITSA VM DS+ +S+ FGFV F +P+ A AV ++
Sbjct: 1 NLYVKNLDDSIDDSRLKQEFVVFGNITSAKVMTDSNNRSKGFGFVCFSNPEEATKAVTEM 60
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQE 299
NG K YV AQ++ +R+A L +++ Q
Sbjct: 61 NGKICGSKPLYVALAQRKEDRKAHLASQYMQR 92
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N+++KNLD SID+ L F FG + S KV DSN +SKG+GFV F N E A A+ +
Sbjct: 1 NLYVKNLDDSIDDSRLKQEFVVFGNITSAKVMTDSNNRSKGFGFVCFSNPEEATKAVTEM 60
Query: 177 NGMLINDKQVYVGLFVRRQER 197
NG + K +YV L R+++R
Sbjct: 61 NGKICGSKPLYVALAQRKEDR 81
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
+LYV +L+ ++++S+L F + S +V D + RS G+ +V +SNP++A A
Sbjct: 1 NLYVKNLDDSIDDSRLKQEFVVFGNITSAKVMTDSNNRSK-GFGFVCFSNPEEATKAVTE 59
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLD---TSIDNKALCDTFAAFG 140
+N KP+ + + R RK+ + +++ ++ +S N+ +T + G
Sbjct: 60 MNGKICGSKPLYVALAQRKED-RKAHLASQYMQRVNPHRSSYPNQVSVNTLISGG 113
>gi|168018575|ref|XP_001761821.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686876|gb|EDQ73262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 153
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/148 (56%), Positives = 103/148 (69%), Gaps = 8/148 (5%)
Query: 498 RNSNQGIRYLDNARNGTDQSVV------SMVPVPFEVSGMPATPVETPRPV-PVPISTLT 550
R N+ RY+ NARN D SV +M+PVP E+ G PA V+ P P+PIS L
Sbjct: 4 RGGNRNFRYIPNARNTPDVSVPPQGIINTMLPVPLEIGGAPAANVDPGVPQQPLPISALA 63
Query: 551 SALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKV 610
SALASA PD + MLGEQLYPLV+ +E A KVTGMLLEMDQTEVLHLIESP+ALK KV
Sbjct: 64 SALASAPPDQQRAMLGEQLYPLVDQLEHDFAGKVTGMLLEMDQTEVLHLIESPDALKAKV 123
Query: 611 AEAMAVLQEA-AARSDVNEKLGSLAVNE 637
AEAM VL+ A A S ++LG+L++++
Sbjct: 124 AEAMEVLRMAQAVPSAPTDQLGNLSISD 151
>gi|440293231|gb|ELP86374.1| polyadenylate-binding protein, cytoplasmic and nuclear, putative
[Entamoeba invadens IP1]
Length = 538
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 170/342 (49%), Gaps = 32/342 (9%)
Query: 18 TAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQV--AQVVSVRVCRDQSKRSSLGYAYVN 75
T P N +++V L +NV ES LY S +QV SV V R++ +++ AYVN
Sbjct: 3 TTLFPDFDENKTVFVSGLTKNVTESLLYKEISAKFESQVASVHVSRNEHYDTAI--AYVN 60
Query: 76 YSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDT 135
+ + A A E +N I+GKP+ + +S +D R N+F+KN+ ++ K + D
Sbjct: 61 MNTHEAAKKAIETMNGALIDGKPVNMFWSLKDFKQRTETQTNLFVKNIKKTVSQKEMQDV 120
Query: 136 FAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ 195
F FG ++S K++++ NG S G+G+V++ EAA A++ N I K V +
Sbjct: 121 FMTFGEIISVKLSVNENGASNGFGYVKYRTIEAALKAVE--NAAEIKAKIGEDNFIVAKF 178
Query: 196 ERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS------AIVMKDSDGKSRCF 249
E+ +N K TN+YV+N+ ++V +E K F FG + ++ D
Sbjct: 179 EKQTKN---KKTNLYVSNIDKSVNEEQFVKYFETFGPLRKNPDNKFQVLFASKDEYPTAM 235
Query: 250 GFVNFQSPDAAAAAVEKLNGTTNN-------DKVWYVGRAQKRAEREADLRAKFEQERIS 302
GFV+F++ + A A L NN V+Y+ + ER+ + + K + S
Sbjct: 236 GFVDFENEEDAQKA---LTAPKNNVLGQGEIKVVYYMS----KKERKREYQLKNNEIMAS 288
Query: 303 RYEKLKGANLYLKNLDD---SINDEKLKELFSEFGTITSCKV 341
K K N+Y+K +D S +D +++ F++ G I S ++
Sbjct: 289 IKGKYKEFNMYVKTSNDSEHSTSDAEIRSAFADCGEIYSIRI 330
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 124/254 (48%), Gaps = 31/254 (12%)
Query: 159 GFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETV 218
+V EAA+ AI+ +NG LI+ K V +F ++ Q+ + TN++V N+ +TV
Sbjct: 57 AYVNMNTHEAAKKAIETMNGALIDGKPV--NMFWSLKDFKQRTETQ--TNLFVKNIKKTV 112
Query: 219 TDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWY 278
+ ++++ +F FG I S + + +G S FG+V +++ +AA AVE
Sbjct: 113 SQKEMQDVFMTFGEIISVKLSVNENGASNGFGYVKYRTIEAALKAVE------------- 159
Query: 279 VGRAQKRAEREAD--LRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTI 336
A+ +A+ D + AKFE++ K K NLY+ N+D S+N+E+ + F FG +
Sbjct: 160 -NAAEIKAKIGEDNFIVAKFEKQT-----KNKKTNLYVSNIDKSVNEEQFVKYFETFGPL 213
Query: 337 TSCK------VMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEE 390
+ + + GF F E+A +AL ++G+ + V K+E
Sbjct: 214 RKNPDNKFQVLFASKDEYPTAMGFVDFENEEDAQKALTAPKNNVLGQGEIKVVYYMSKKE 273
Query: 391 RKARLQAQFAQIRA 404
RK Q + +I A
Sbjct: 274 RKREYQLKNNEIMA 287
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 29/192 (15%)
Query: 209 VYVNNLAETVTDEDL-KKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
V+V+ L + VT+ L K+I F + +++ + ++ +VN + +AA A+E +
Sbjct: 15 VFVSGLTKNVTESLLYKEISAKFESQVASVHVSRNEHYDTAIAYVNMNTHEAAKKAIETM 74
Query: 268 NGTTNNDK----VWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIND 323
NG + K W + ++R E + NL++KN+ +++
Sbjct: 75 NGALIDGKPVNMFWSLKDFKQRTETQT--------------------NLFVKNIKKTVSQ 114
Query: 324 EKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALN---EMNGKMIGRKPL 380
++++++F FG I S K+ V+++G S G G+ + E A +A+ E+ K IG
Sbjct: 115 KEMQDVFMTFGEIISVKLSVNENGASNGFGYVKYRTIEAALKAVENAAEIKAK-IGEDNF 173
Query: 381 YVAVAQRKEERK 392
VA +++ + K
Sbjct: 174 IVAKFEKQTKNK 185
>gi|357162700|ref|XP_003579494.1| PREDICTED: uncharacterized protein LOC100845138 [Brachypodium
distachyon]
Length = 929
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 176/381 (46%), Gaps = 38/381 (9%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SLYV +L ++ + +L F +++ +V RD + + GY +V YSN +AANA
Sbjct: 309 SLYVRNLSLSMTKEELLQHFLPFGKIIDAKVPRDYATGLNKGYGFVRYSNSHEAANAIIH 368
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSG--------------YGNVFIKNLDTSIDNKALCD 134
LN + GK + + S P++ S N+++ N+ TSID K L +
Sbjct: 369 LNGHLVEGKKMEVRVSGVSPALSNSAVESHTDARLIKEIDMANLYVCNIPTSIDTKKLIE 428
Query: 135 TFAAFGTVLSCKVAIDSNGQS-KG-YGFVQFENEEAAQNAIKMLNGMLINDKQVYV---G 189
F FG + +VA S KG YGFV+F + + A AI +++G L+ + + V G
Sbjct: 429 IFLPFGKITHARVAAHQGTYSGKGRYGFVKFADSQCAAEAITLMDGALVEGETLVVRVAG 488
Query: 190 LFVRRQERAQQNV---SPKF--TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG 244
L A + SP+ + +Y+ NL + + + K+F FG I+ ++ +
Sbjct: 489 LSSSASSPAVHGLPIPSPEINKSRIYITNLPRSTNADMMVKLFVPFGQISKVVMNLE--- 545
Query: 245 KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRY 304
+ V + +A A++ ++G K V R+ A + Q
Sbjct: 546 ----YSLVYYADVASAVKAIKHMDGYMIGGKRLVVRRSDSCPTDAAGHTST--QSLGKEV 599
Query: 305 EKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEAT 364
+++ AN+++ + ++N ++L ELF FG I +V QH +G G F+ P A
Sbjct: 600 KEIDMANVFVGRIPSTVNGDQLVELFRPFGQIVQVRVF--QH---QGYGMFRFNDPFSAA 654
Query: 365 RALNEMNGKMIGRKPLYVAVA 385
A++ MNG IG L V VA
Sbjct: 655 AAIDHMNGYQIGGSALVVRVA 675
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 173/390 (44%), Gaps = 50/390 (12%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
N +LYVG+L +V +L +LF ++V +V + S GY +V Y +P A A
Sbjct: 203 NTNLYVGNLPASVGSHKLIELFLPFGRIVRSKVADECFTGLSKGYGFVKYDDPHSATAAI 262
Query: 87 EALNFMPINGKPIRIMY-----SHRDPSIRKSG-----------YGNVFIKNLDTSIDNK 130
+N ++GK + + S +PSI+ +++++NL S+ +
Sbjct: 263 NRMNGRLVDGKILEVRVAGVPPSGSNPSIQSVSETYSQPSEEIDMSSLYVRNLSLSMTKE 322
Query: 131 ALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVG 189
L F FG ++ KV D + G +KGYGFV++ N A NAI LNG L+ K++ V
Sbjct: 323 ELLQHFLPFGKIIDAKVPRDYATGLNKGYGFVRYSNSHEAANAIIHLNGHLVEGKKMEVR 382
Query: 190 L----------FVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVM 239
+ V A+ N+YV N+ ++ + L +IF FG IT A V
Sbjct: 383 VSGVSPALSNSAVESHTDARLIKEIDMANLYVCNIPTSIDTKKLIEIFLPFGKITHARVA 442
Query: 240 KDS---DGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKF 296
GK R +GFV F AA A+ ++G + V R A L +
Sbjct: 443 AHQGTYSGKGR-YGFVKFADSQCAAEAITLMDGALVEGETLVV--------RVAGLSSSA 493
Query: 297 EQERISRY----EKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGS 352
+ ++ + +Y+ NL S N + + +LF FG I+ KV+++
Sbjct: 494 SSPAVHGLPIPSPEINKSRIYITNLPRSTNADMMVKLFVPFGQIS--KVVMNLE-----Y 546
Query: 353 GFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
++ A +A+ M+G MIG K L V
Sbjct: 547 SLVYYADVASAVKAIKHMDGYMIGGKRLVV 576
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 201/491 (40%), Gaps = 68/491 (13%)
Query: 7 AAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKR 66
A + +AV S T A + +LYV ++ +++ +L ++F ++ RV Q
Sbjct: 389 ALSNSAVESHTDARLIKEIDMANLYVCNIPTSIDTKKLIEIFLPFGKITHARVAAHQGTY 448
Query: 67 SSLG-YAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRD---------------PSI 110
S G Y +V +++ Q AA A ++ + G+ + + + P I
Sbjct: 449 SGKGRYGFVKFADSQCAAEAITLMDGALVEGETLVVRVAGLSSSASSPAVHGLPIPSPEI 508
Query: 111 RKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQ 170
KS ++I NL S + + F FG + KV ++ Y V + + +A
Sbjct: 509 NKS---RIYITNLPRSTNADMMVKLFVPFGQI--SKVVMNLE-----YSLVYYADVASAV 558
Query: 171 NAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK--------------FTNVYVNNLAE 216
AIK ++G +I K+ L VRR + + + NV+V +
Sbjct: 559 KAIKHMDGYMIGGKR----LVVRRSDSCPTDAAGHTSTQSLGKEVKEIDMANVFVGRIPS 614
Query: 217 TVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKV 276
TV + L ++F FG I V + + +G F P +AAAA++ +NG
Sbjct: 615 TVNGDQLVELFRPFGQIVQVRVFQ-----HQGYGMFRFNDPFSAAAAIDHMNGYQIGGSA 669
Query: 277 WYVGRAQKRAEREADLRAKFEQERI----SRYEKLKGANLYLKNLDDSINDEKLKELFSE 332
V A D A + ++ + ++ ANLY+ +L I EKL E+F
Sbjct: 670 LVVRVAG--LPNPGDFSAATDDLKLQMPGNEGRQIDMANLYVCHLPLYITTEKLIEIFLP 727
Query: 333 FGTITSCKVMVDQH-GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEER 391
G IT +V+ D++ G SKG GF F+ A AL MNG + L V +A
Sbjct: 728 CGQITQARVVTDRYTGISKGFGFVRFADTYSAAVALTHMNGYPLEGHILEVRIAGVHPSD 787
Query: 392 KARLQAQ-FAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLYY------GQGTPGLMPPQA 444
Q ++Q P S + GIP + P G + +Y GQGT A
Sbjct: 788 MGSYMTQLYSQFTYPDP-STMVVGIPTSYW--PYYGAESVYSMSAENQGQGTASAT--DA 842
Query: 445 AGYGFQQQVFP 455
A QQ+ P
Sbjct: 843 ASQTSQQEGLP 853
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 303 RYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH-GFSKGSGFAAFSMPE 361
+ +++ NLY+ NL S+ KL ELF FG I KV + G SKG GF + P
Sbjct: 197 KLKEVDNTNLYVGNLPASVGSHKLIELFLPFGRIVRSKVADECFTGLSKGYGFVKYDDPH 256
Query: 362 EATRALNEMNGKMIGRKPLYVAVA 385
AT A+N MNG+++ K L V VA
Sbjct: 257 SATAAINRMNGRLVDGKILEVRVA 280
>gi|363750089|ref|XP_003645262.1| hypothetical protein Ecym_2746 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888895|gb|AET38445.1| Hypothetical protein Ecym_2746 [Eremothecium cymbalariae
DBVPG#7215]
Length = 681
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 177/418 (42%), Gaps = 66/418 (15%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
V+L++GDL++ V E L D F++ VS ++C D + + SLGY Y+N+SN +DA E
Sbjct: 120 VALFIGDLDEKVTEKNLRDTFNKFDSFVSAKICIDSNTKKSLGYGYLNFSNEEDAERVIE 179
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL---DTSIDNKALCDTFAAFGTVLS 144
N++PI G+ +RIM S R+ RK+ NVF NL + ++ + D F +G +LS
Sbjct: 180 EFNYIPIFGREVRIMPSLRNSFYRKNIGTNVFFSNLPLENLALTTRVFYDAFKKYGKILS 239
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CK+ + K GFV FE + +A+ AI NG + G+ R R SP
Sbjct: 240 CKL-----DRRKNIGFVYFEKDSSAKQAIAEYNGKQFYGNNILCGIHFDRNVRK----SP 290
Query: 205 KFTN------------------------------------VYVNNLAETVTDEDLKKIFG 228
+F V++ NL + L F
Sbjct: 291 EFEKRKARLEDMTLVKESLVMDNNQEIPSGSKMKGPHPNAVFIKNLPLNSDSDLLLDYFS 350
Query: 229 HFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAER 288
G + S I + + + F+ F+ A A++ LN + + + RAQK +
Sbjct: 351 QIGPVKS-IFTSNVSKLNSAWAFITFKKGSDAQDAIDSLNHSQLLGRTIELSRAQKNFQS 409
Query: 289 EAD------------LRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTI 336
+ D +++ + S++ +YL +L SI E+ + F I
Sbjct: 410 DIDAANAGTGNTGGSIKSADSEGSSSQHNSSYKLTVYLSSL-SSICSEQFLQCFCAEERI 468
Query: 337 TSCKVMV---DQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEER 391
+ ++ + D+ + SGF +A R +N K++G + + KE +
Sbjct: 469 KTKRISIRFYDEDTLT-FSGFVQCQTRNDANRLFELLNDKLLGDSTVKASWKPSKEAK 525
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 137/302 (45%), Gaps = 31/302 (10%)
Query: 99 IRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSN-GQSKG 157
+++ S P++ +FI +LD + K L DTF F + +S K+ IDSN +S G
Sbjct: 103 VKLGRSKDSPTLTSKKLVALFIGDLDEKVTEKNLRDTFNKFDSFVSAKICIDSNTKKSLG 162
Query: 158 YGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ-ERAQQNVSPKFTNVYVNNLAE 216
YG++ F NEE A+ I+ N + I ++V + +R R + F+N+ + NLA
Sbjct: 163 YGYLNFSNEEDAERVIEEFNYIPIFGREVRIMPSLRNSFYRKNIGTNVFFSNLPLENLA- 221
Query: 217 TVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTT---NN 273
+T F +G I S + + + GFV F+ +A A+ + NG NN
Sbjct: 222 -LTTRVFYDAFKKYGKILSCKL-----DRRKNIGFVYFEKDSSAKQAIAEYNGKQFYGNN 275
Query: 274 -------DK-VWYVGRAQKRAEREADLRAKFE------QERISRYEKLKGAN---LYLKN 316
D+ V +KR R D+ E + I K+KG + +++KN
Sbjct: 276 ILCGIHFDRNVRKSPEFEKRKARLEDMTLVKESLVMDNNQEIPSGSKMKGPHPNAVFIKN 335
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMN-GKMI 375
L + + + L + FS+ G + S + + F F +A A++ +N +++
Sbjct: 336 LPLNSDSDLLLDYFSQIGPVKSI-FTSNVSKLNSAWAFITFKKGSDAQDAIDSLNHSQLL 394
Query: 376 GR 377
GR
Sbjct: 395 GR 396
>gi|301606181|ref|XP_002932728.1| PREDICTED: polyadenylate-binding protein 1-B-like [Xenopus
(Silurana) tropicalis]
Length = 447
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 109/193 (56%), Gaps = 14/193 (7%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
+YV N + + ++D FG G T ++ + G+ FG + F A AV+K+
Sbjct: 46 IYVKNFVKEIDEDDF---FGKCGASTK--IINNDCGQQTEFGLLPFNKQKDAIRAVDKMK 100
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKE 328
G Y+ +A+ + +R+ + K E RY NLY+KNL I+D +LK+
Sbjct: 101 GMD-----IYLAQAKIKEKRQTEFSKKPEPLHKPRYN---SVNLYVKNLSYEIDDYRLKK 152
Query: 329 LFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRK 388
F+ FGTITS KVM + G SKG GF FS P EA +AL+EMNGK++ KPLYVA AQRK
Sbjct: 153 EFAPFGTITSAKVM-REGGRSKGFGFVCFSTPAEARKALSEMNGKILASKPLYVAWAQRK 211
Query: 389 EERKARLQAQFAQ 401
+ER+ L Q+ Q
Sbjct: 212 QERQVSLAQQYTQ 224
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 22/204 (10%)
Query: 105 HRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFE 164
H + + K+ +++KN ID D F G S K+ + GQ +G + F
Sbjct: 33 HVNDTESKTKTCPIYVKNFVKEIDED---DFFGKCGA--STKIINNDCGQQTEFGLLPFN 87
Query: 165 NEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS--------PKF--TNVYVNNL 214
++ A A+ + GM I Q + +E+ Q S P++ N+YV NL
Sbjct: 88 KQKDAIRAVDKMKGMDIYLAQAKI------KEKRQTEFSKKPEPLHKPRYNSVNLYVKNL 141
Query: 215 AETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNND 274
+ + D LKK F FGTITSA VM++ G+S+ FGFV F +P A A+ ++NG
Sbjct: 142 SYEIDDYRLKKEFAPFGTITSAKVMREG-GRSKGFGFVCFSTPAEARKALSEMNGKILAS 200
Query: 275 KVWYVGRAQKRAEREADLRAKFEQ 298
K YV AQ++ ER+ L ++ Q
Sbjct: 201 KPLYVAWAQRKQERQVSLAQQYTQ 224
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 58/87 (66%), Gaps = 6/87 (6%)
Query: 532 PATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEM 591
PA V+ P+ + S L SASP ++ +MLG +L+PLV+ I+ A K+TG+LLE
Sbjct: 349 PAICVQGQEPLTI------SLLVSASPHEQKQMLGVRLFPLVQIIDKKLAEKITGILLEF 402
Query: 592 DQTEVLHLIESPEALKTKVAEAMAVLQ 618
D +E+++++ESPE L+T +A+ +LQ
Sbjct: 403 DTSEIIYMLESPELLRTMANKAVTLLQ 429
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
+YV + + ++E D F + + + D +++ G + ++ +DA A + +
Sbjct: 46 IYVKNFVKEIDED---DFFGKCGASTKI-INNDCGQQTEFGL--LPFNKQKDAIRAVDKM 99
Query: 90 NFMPINGKPIRIM------YSHRDPSIRKSGYG--NVFIKNLDTSIDNKALCDTFAAFGT 141
M I +I +S + + K Y N+++KNL ID+ L FA FGT
Sbjct: 100 KGMDIYLAQAKIKEKRQTEFSKKPEPLHKPRYNSVNLYVKNLSYEIDDYRLKKEFAPFGT 159
Query: 142 VLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER 197
+ S KV + G+SKG+GFV F A+ A+ +NG ++ K +YV R+QER
Sbjct: 160 ITSAKV-MREGGRSKGFGFVCFSTPAEARKALSEMNGKILASKPLYVAWAQRKQER 214
>gi|302308066|ref|NP_984845.2| AEL016Cp [Ashbya gossypii ATCC 10895]
gi|299789279|gb|AAS52669.2| AEL016Cp [Ashbya gossypii ATCC 10895]
gi|374108067|gb|AEY96974.1| FAEL016Cp [Ashbya gossypii FDAG1]
Length = 678
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 175/418 (41%), Gaps = 66/418 (15%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
V+L++GDL++ V E L D F++ VS ++C D + + SLGY Y+N+SN +DA E
Sbjct: 116 VALFIGDLDEKVTEKNLRDTFNKFDSFVSAKICIDSNTKKSLGYGYLNFSNEEDAERVIE 175
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL---DTSIDNKALCDTFAAFGTVLS 144
N++PI G+ +RIM S R+ RK+ NVF NL + ++ + D F FG +LS
Sbjct: 176 EFNYIPIFGREVRIMPSLRNSFYRKNIGTNVFFSNLPLENLALTTRVFYDAFKKFGKILS 235
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
CK+ + K GFV FE + AA+ AI NG + G+ R R SP
Sbjct: 236 CKL-----DRRKNIGFVYFEKDSAAKQAIAEYNGKEFFGNNILCGIHFDRNVRK----SP 286
Query: 205 KFTN------------------------------------VYVNNLAETVTDEDLKKIFG 228
+F V++ NL + L F
Sbjct: 287 EFEKRKARLEDMTLVKESLVMDNNQEIPSGSKMKGPHPNAVFIKNLPLNPDSDLLLDYFS 346
Query: 229 HFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAER 288
G + S I + + + F+ F+ A A++ LN + + + RAQK +
Sbjct: 347 QIGPVKS-IFTSNVSKLNSAWAFITFKKGSDAQDAIDNLNHSQLLGRTIELSRAQKNFQT 405
Query: 289 EAD------------LRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTI 336
+ D R+ +++ +YL +L SI E+ + F I
Sbjct: 406 DIDAANAGAGNNSSTTRSNDSDPCSTQHSSSYKLTVYLSSL-SSICSEQFLQCFCAEERI 464
Query: 337 TSCKVMV---DQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEER 391
+ ++ + D+ + SGF +A R +N K++G + + KE +
Sbjct: 465 KTKRISIRFYDEATLT-FSGFVQCQTRNDANRLFELLNNKLLGDSTVKASWKPSKEAK 521
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 31/302 (10%)
Query: 99 IRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSN-GQSKG 157
+++ S P++ +FI +LD + K L DTF F + +S K+ IDSN +S G
Sbjct: 99 VKLGRSKDSPTLTSKKLVALFIGDLDEKVTEKNLRDTFNKFDSFVSAKICIDSNTKKSLG 158
Query: 158 YGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ-ERAQQNVSPKFTNVYVNNLAE 216
YG++ F NEE A+ I+ N + I ++V + +R R + F+N+ + NLA
Sbjct: 159 YGYLNFSNEEDAERVIEEFNYIPIFGREVRIMPSLRNSFYRKNIGTNVFFSNLPLENLA- 217
Query: 217 TVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTT---NN 273
+T F FG I S + + + GFV F+ AA A+ + NG NN
Sbjct: 218 -LTTRVFYDAFKKFGKILSCKL-----DRRKNIGFVYFEKDSAAKQAIAEYNGKEFFGNN 271
Query: 274 --------DKVWYVGRAQKRAEREADLRAKFE------QERISRYEKLKGAN---LYLKN 316
V +KR R D+ E + I K+KG + +++KN
Sbjct: 272 ILCGIHFDRNVRKSPEFEKRKARLEDMTLVKESLVMDNNQEIPSGSKMKGPHPNAVFIKN 331
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMN-GKMI 375
L + + + L + FS+ G + S + + F F +A A++ +N +++
Sbjct: 332 LPLNPDSDLLLDYFSQIGPVKSI-FTSNVSKLNSAWAFITFKKGSDAQDAIDNLNHSQLL 390
Query: 376 GR 377
GR
Sbjct: 391 GR 392
>gi|400260942|pdb|4F25|A Chain A, Crystal Structure Of The Second Rrm Domain Of Human Pabpc1
At Ph 6.0
gi|400260943|pdb|4F26|A Chain A, Crystal Structure Of The Second Rrm Domain Of Human Pabpc1
A Ph 9.0
Length = 115
Score = 126 bits (317), Expect = 3e-26, Method: Composition-based stats.
Identities = 64/108 (59%), Positives = 80/108 (74%), Gaps = 3/108 (2%)
Query: 114 GYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAI 173
G GN+FIKNLD SIDNKAL DTF+AFG +LSCKV D NG SKGYGFV FE +EAA+ AI
Sbjct: 4 GSGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAI 62
Query: 174 KMLNGMLINDKQVYVGLFVRRQERAQQ--NVSPKFTNVYVNNLAETVT 219
+ +NGML+ND++V+VG F R+ER + + +FTNVY+ N T
Sbjct: 63 EKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGPGST 110
Score = 78.2 bits (191), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/92 (42%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 307 LKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRA 366
L N+++KNLD SI+++ L + FS FG I SCKV+ D++G SKG GF F E A RA
Sbjct: 3 LGSGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERA 61
Query: 367 LNEMNGKMIGRKPLYVAVAQRKEERKARLQAQ 398
+ +MNG ++ + ++V + ++ER+A L A+
Sbjct: 62 IEKMNGMLLNDRKVFVGRFKSRKEREAELGAR 93
Score = 72.8 bits (177), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 67/110 (60%), Gaps = 11/110 (10%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
N+++ NL +++ ++ L F FG I S V+ D +G S+ +GFV+F++ +AA A+EK+
Sbjct: 7 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKM 65
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL 317
NG ND+ +VGR + R EREA+L A+ ++ N+Y+KN
Sbjct: 66 NGMLLNDRKVFVGRFKSRKEREAELGARAKE----------FTNVYIKNF 105
>gi|413918856|gb|AFW58788.1| hypothetical protein ZEAMMB73_448418 [Zea mays]
Length = 212
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 119/207 (57%), Gaps = 21/207 (10%)
Query: 446 GYGFQQQVFPGLRPGGP---NYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNS-- 500
G+ FQQQ+ PG+RPGGP NY +P Q Q P R G+RR Q +
Sbjct: 8 GFAFQQQLVPGMRPGGPHMPNYYVPVVQQGQQGP--RPGIRRGAGAQGQQPVPPFQQQIL 65
Query: 501 NQGIRYLDNARNGTDQSVVSMVPVPFEVSGMPAT------PVETPRPVPVP-ISTLTSAL 553
+G Y R T +++ +P GM PV P I TLTSAL
Sbjct: 66 PRGRMY----RYPTGRNMPEAPAMPGVAGGMIQAYDMGGFPVRDAALSPAAQIGTLTSAL 121
Query: 554 ASASPDDRTRMLGEQLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEA 613
A+A+P+ + +LGE LYPLVE +EP A+KVTGMLLEMDQTEVLHL+ESP+ALK+KVAEA
Sbjct: 122 ANANPEQQRTILGENLYPLVEQLEPNQAAKVTGMLLEMDQTEVLHLLESPDALKSKVAEA 181
Query: 614 MAVLQEAAARSDVN---EKLGSLAVNE 637
M VL+ A + + N +L +L++ E
Sbjct: 182 MDVLRNVAHQQNPNLPTSQLAALSLTE 208
>gi|156849127|ref|XP_001647444.1| hypothetical protein Kpol_1018p122 [Vanderwaltozyma polyspora DSM
70294]
gi|156118130|gb|EDO19586.1| hypothetical protein Kpol_1018p122 [Vanderwaltozyma polyspora DSM
70294]
Length = 634
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 126/237 (53%), Gaps = 33/237 (13%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
++LY+GDLE+ V E L + F+ ++SV++C D SLGY Y+N + ++A + E
Sbjct: 99 IALYIGDLEKFVTEDMLKNFFAMYKSLLSVKICVDSHSGESLGYGYLNLTTKEEADDLME 158
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL---DTSIDNKALCDTFAAFGTVLS 144
N+ PI GK +RIM S R+ RK+ NVF +L + SI + + F A+G +LS
Sbjct: 159 RFNYTPIFGKVVRIMPSLRNSQTRKNMGTNVFFSDLPLSEKSITTRDFYNFFKAYGNILS 218
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQ------NAIKMLNGMLIN-----DKQVYVGLFVR 193
CK+ SK GF+ FENE +A+ NA ++L G IN DK + L
Sbjct: 219 CKL-----NTSKNIGFIFFENESSAKEVISKFNANELLYGYKINCGVHIDKSIRKNLGTE 273
Query: 194 RQERA-QQNVSPKFT-------------NVYVNNLAETVTDEDLKKIFGHFGTITSA 236
+Q+ A ++ S + T ++ V NL + ++D ++ IFG+FG+I S
Sbjct: 274 KQKSASSESCSHRLTPICRPNEHSTERKSILVKNLPKEISDYEISSIFGNFGSIEST 330
>gi|293331471|ref|NP_001168063.1| uncharacterized protein LOC100381794 [Zea mays]
gi|223945787|gb|ACN26977.1| unknown [Zea mays]
Length = 183
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 104/174 (59%), Gaps = 21/174 (12%)
Query: 478 QRTGVRRSGNTHQMQQPQFMRNSNQ-------GIRYLDNARNGTD---QSVVSMVPVPFE 527
QR RR+G MQQP M Q G RY R D SV +++P +E
Sbjct: 12 QRPAGRRAGG---MQQPMPMGGQQQVFPRGGRGYRY-PTGRGMPDPGMHSVGAVMPPSYE 67
Query: 528 VSGMPATPVETPRPVPVPISTLTSALASASPDDRTRMLGEQLYPLVENIEPVHASKVTGM 587
+ GMP + P PVPI L +ALA+A PD + MLGE LYPLVE +E A+KVTGM
Sbjct: 68 MGGMP---MREAAPQPVPIGALATALANAPPDQQRLMLGENLYPLVEQLEREQAAKVTGM 124
Query: 588 LLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSDVN----EKLGSLAVNE 637
LLEMDQTEVLHL+ESP+ALK KVAEAM VL+ A N ++L +L++N+
Sbjct: 125 LLEMDQTEVLHLLESPDALKAKVAEAMEVLRSAQHLQQSNVSTEQQLANLSLND 178
>gi|323650114|gb|ADX97143.1| polyadenylate-binding protein 1 [Perca flavescens]
Length = 263
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 145/282 (51%), Gaps = 40/282 (14%)
Query: 349 SKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQ----IRA 404
+K F FS PEEAT+A+ EMNG+++ KPLYVA+AQRKEER+A L Q+ Q +RA
Sbjct: 1 AKVLAFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMATVRA 60
Query: 405 -PGG-MSPLASGIP-GYHHGA-PRLGPQQLYY-----GQGTPGLMPPQAAGYGFQQQVFP 455
P ++P P GY A P+ + YY Q P P+ A G + Q F
Sbjct: 61 VPNPVLNPYQPAPPSGYFMAAIPQAQNRAAYYSANQLAQLRPS---PRWATQGVRPQHFQ 117
Query: 456 ----GLRPGGPNYIMPYHLQRQVHPGQRTGVRRSGNTHQMQQPQFMRNSNQGIRYLDNAR 511
+RP P Q R T Q P+ M + + L
Sbjct: 118 NMPNAMRPSAPR-------------PQTFNAIRPTTTPNAQVPRMMASQRMPTQALSQRP 164
Query: 512 NGTDQSVVSMVPVPFEVSGMPATPVETPRPVPV----PISTLTSALASASPDDRTRMLGE 567
G + + +P ++ P ++ P V V P++ S LA+A P ++ +MLGE
Sbjct: 165 TGASATAAPVRAMPQHMASQPQVAMQQPA-VHVQGQEPLTA--SMLAAAPPQEQKQMLGE 221
Query: 568 QLYPLVENIEPVHASKVTGMLLEMDQTEVLHLIESPEALKTK 609
+L+PL++N+ P A K+TGMLLE+D +E+LH++ESPE+L++K
Sbjct: 222 RLFPLIQNMHPSLAGKITGMLLEIDNSELLHMLESPESLRSK 263
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ 298
++ FV F SP+ A AV ++NG K YV AQ++ ER+A L ++ Q
Sbjct: 1 AKVLAFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQ 53
>gi|123430889|ref|XP_001307992.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121889649|gb|EAX95062.1| hypothetical protein TVAG_428650 [Trichomonas vaginalis G3]
Length = 537
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 144/273 (52%), Gaps = 25/273 (9%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
+++ +L + + L + +VV+V + +R + +A+V + P+ A A +
Sbjct: 11 VHISNLPSGITTDFIKILLQECGEVVNVTL----KERQNGNFAFVTFDTPESALKAIKEF 66
Query: 90 NFMPINGKPIRIMYSHRD-PSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
N+ +NG PI I + ++ ++ KSG GN++++ LD I+ L + F +G V+SCK+
Sbjct: 67 NYTKLNGSPIVITPTTQEYQNLIKSGEGNLYVRGLDVYIEVSQLHELFQTYGEVISCKLP 126
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK--- 205
++G +KGY +VQF + A+ A LN +IN K++ V + +++ER Q+ SP
Sbjct: 127 TGTDGLNKGYAYVQFRDPNDAEKARVELNDAVINGKKISVEPY-KKKERPQK-TSPASNP 184
Query: 206 ---------FTNVYVNNLAETVTDE-DLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQ 255
FTN+++ NL V +E DL +F FG + S ++ DG S GF N
Sbjct: 185 RGAPASDDVFTNIFIRNLPSNVRNETDLGNLFSEFGVVISTKMLP--DGFS---GFCNMI 239
Query: 256 SPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAER 288
D+A A++ LNG + KV V RA + ER
Sbjct: 240 DHDSAVRAIQALNGKVIDGKVLEVVRAISKEER 272
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 126/283 (44%), Gaps = 30/283 (10%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLN 177
V I NL + I + G V++ + NG + FV F+ E+A AIK N
Sbjct: 11 VHISNLPSGITTDFIKILLQECGEVVNVTLKERQNGN---FAFVTFDTPESALKAIKEFN 67
Query: 178 GMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAI 237
+N + + + Q + N+YV L + L ++F +G + S
Sbjct: 68 YTKLNGSPI---VITPTTQEYQNLIKSGEGNLYVRGLDVYIEVSQLHELFQTYGEVISCK 124
Query: 238 VMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFE 297
+ +DG ++ + +V F+ P+ A A +LN N K V K+ ER
Sbjct: 125 LPTGTDGLNKGYAYVQFRDPNDAEKARVELNDAVINGKKISV-EPYKKKERP-------- 175
Query: 298 QERISRYEKLKGA--------NLYLKNLDDSI-NDEKLKELFSEFGTITSCKVMVDQHGF 348
++ S +GA N++++NL ++ N+ L LFSEFG + S K++ D GF
Sbjct: 176 -QKTSPASNPRGAPASDDVFTNIFIRNLPSNVRNETDLGNLFSEFGVVISTKMLPD--GF 232
Query: 349 SKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEER 391
S GF + A RA+ +NGK+I K L V A KEER
Sbjct: 233 S---GFCNMIDHDSAVRAIQALNGKVIDGKVLEVVRAISKEER 272
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 102/195 (52%), Gaps = 29/195 (14%)
Query: 21 VPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSL--GYAYVNYSN 78
+ SG GN LYV L+ + SQL++LF +V+S C+ + L GYAYV + +
Sbjct: 89 IKSGEGN--LYVRGLDVYIEVSQLHELFQTYGEVIS---CKLPTGTDGLNKGYAYVQFRD 143
Query: 79 PQDAANAKEALNFMPINGKPIRIM-YSHRD------PSIRKSG-------YGNVFIKNLD 124
P DA A+ LN INGK I + Y ++ P+ G + N+FI+NL
Sbjct: 144 PNDAEKARVELNDAVINGKKISVEPYKKKERPQKTSPASNPRGAPASDDVFTNIFIRNLP 203
Query: 125 TSIDNKA-LCDTFAAFGTVLSCKVAIDSNGQSKGY-GFVQFENEEAAQNAIKMLNGMLIN 182
+++ N+ L + F+ FG V+S K+ D G+ GF + ++A AI+ LNG +I+
Sbjct: 204 SNVRNETDLGNLFSEFGVVISTKMLPD------GFSGFCNMIDHDSAVRAIQALNGKVID 257
Query: 183 DKQVYVGLFVRRQER 197
K + V + ++ER
Sbjct: 258 GKVLEVVRAISKEER 272
>gi|440293224|gb|ELP86367.1| polyadenylate-binding protein, putative [Entamoeba invadens IP1]
Length = 519
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 184/383 (48%), Gaps = 40/383 (10%)
Query: 15 SATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQV--AQVVSVRVCRDQSKRSSLGYA 72
SA P+ N +++V L +NV ES LY S +QV SV V R++ +++ A
Sbjct: 2 SAPQNLFPNFDDNKTIFVSSLSKNVTESLLYKEISAKFESQVASVHVSRNEHYDTAI--A 59
Query: 73 YVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKAL 132
YVN + + A A E +N I+GK + + +S +D R N+F+KN+ ++ K +
Sbjct: 60 YVNMNTHEAAKKAIETMNGALIDGKTVNMFWSLKDFKQRTETQTNLFVKNIKKTVSQKEM 119
Query: 133 CDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFV 192
D F FG ++S K++++ NG S G+G+V++ EAA A++ N I K V
Sbjct: 120 QDVFMTFGEIISVKLSVNENGASNGFGYVKYRTIEAALKAVE--NAAEIKAKIGEDNFIV 177
Query: 193 RRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS------AIVMKDSDGKS 246
+ E+ +N K TN+YV+N+ ++V +E K F FG + ++ D
Sbjct: 178 AKFEKQTKN---KKTNLYVSNIDKSVNEEQFVKYFETFGPLRKNPDNKFQVLFACDDKHP 234
Query: 247 RCFGFVNFQS-PDAAAAAVEKLNGTTNNDKV---WYVGRA-------QKRAEREADLRAK 295
GFV+F++ DA A N ++ +Y+ R+ QK E +++++ K
Sbjct: 235 TAMGFVDFENEEDAQKALTAPKNNVLGQGEIKVDYYMSRSERSRVWLQKSLEIKSNIQGK 294
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ K N+Y+ L + +D +++ F++ G I S +V + F
Sbjct: 295 Y-----------KDFNMYINTLKEPTSDAEIRSAFADCGEIYSVRVKYYEK-VPTSIAFV 342
Query: 356 AFSMPEEATRALNEMNGKMIGRK 378
F+ E +A+ + G+ +G K
Sbjct: 343 CFTSQEAFNKAMTK--GEELGWK 363
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 119/246 (48%), Gaps = 41/246 (16%)
Query: 159 GFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETV 218
+V EAA+ AI+ +NG LI+ K V +F ++ Q+ + TN++V N+ +TV
Sbjct: 59 AYVNMNTHEAAKKAIETMNGALIDGKTV--NMFWSLKDFKQRTETQ--TNLFVKNIKKTV 114
Query: 219 TDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWY 278
+ ++++ +F FG I S + + +G S FG+V +++ +AA AVE
Sbjct: 115 SQKEMQDVFMTFGEIISVKLSVNENGASNGFGYVKYRTIEAALKAVE------------- 161
Query: 279 VGRAQKRAEREAD--LRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFG-- 334
A+ +A+ D + AKFE++ K K NLY+ N+D S+N+E+ + F FG
Sbjct: 162 -NAAEIKAKIGEDNFIVAKFEKQT-----KNKKTNLYVSNIDKSVNEEQFVKYFETFGPL 215
Query: 335 ---------TITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
+ +C D+H GF F E+A +AL ++G+ + V
Sbjct: 216 RKNPDNKFQVLFACD---DKH--PTAMGFVDFENEEDAQKALTAPKNNVLGQGEIKVDYY 270
Query: 386 QRKEER 391
+ ER
Sbjct: 271 MSRSER 276
>gi|384247365|gb|EIE20852.1| hypothetical protein COCSUDRAFT_4708, partial [Coccomyxa
subellipsoidea C-169]
Length = 264
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 128/254 (50%), Gaps = 22/254 (8%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
+LYVG+L VNE+ L D+FS + V VR+ +D++ +S G A+V + + Q AA A +
Sbjct: 6 ALYVGNLHPYVNEAVLQDIFSTLGTVSEVRIVKDRATGNSAGSAFVKFEDHQAAAIALKT 65
Query: 89 LNFMPINGKPIRIMYS-HRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKV 147
+N + K +RI ++ ++ + + + ++F+ NL + + L F G +V
Sbjct: 66 INGRILYNKEVRIQWAFQKEKTENTASHSHIFVGNLSGDVADPVLLQAFQHLGECSDARV 125
Query: 148 AID-SNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQ------- 199
D S G+SKG+GFV F +EAA+ A+ ++G + ++ G + E
Sbjct: 126 MWDHSTGRSKGFGFVSFRTKEAAEKALAEMDGAQVGQWKIRCGWAHHKTEAVTGLDIDTV 185
Query: 200 QNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRC----FGFVNFQ 255
P TNVYV NL V +EDL+ FG +G IT G C +GFV ++
Sbjct: 186 DRADPANTNVYVGNLPTEVMEEDLRAAFGAYGEIT---------GLKPCHKGGYGFVTYR 236
Query: 256 SPDAAAAAVEKLNG 269
AA A+ +NG
Sbjct: 237 DHSAAVQAIVGMNG 250
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 132/260 (50%), Gaps = 15/260 (5%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAAQNAIKML 176
+++ NL ++ L D F+ GTV ++ D + G S G FV+FE+ +AA A+K +
Sbjct: 7 LYVGNLHPYVNEAVLQDIFSTLGTVSEVRIVKDRATGNSAGSAFVKFEDHQAAAIALKTI 66
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSA 236
NG ++ +K+V + + ++E+ + S ++++V NL+ V D L + F H G + A
Sbjct: 67 NGRILYNKEVRI-QWAFQKEKTENTASH--SHIFVGNLSGDVADPVLLQAFQHLGECSDA 123
Query: 237 IVMKD-SDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
VM D S G+S+ FGFV+F++ +AA A+ +++G G A + E L
Sbjct: 124 RVMWDHSTGRSKGFGFVSFRTKEAAEKALAEMDGAQVGQWKIRCGWAHHKTEAVTGL--- 180
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
+ + + R + N+Y+ NL + +E L+ F +G IT K G GF
Sbjct: 181 -DIDTVDRADPAN-TNVYVGNLPTEVMEEDLRAAFGAYGEITGLKPC-----HKGGYGFV 233
Query: 356 AFSMPEEATRALNEMNGKMI 375
+ A +A+ MNGK +
Sbjct: 234 TYRDHSAAVQAIVGMNGKEL 253
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 108/248 (43%), Gaps = 29/248 (11%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKD-SDGKSRCFGFVNFQSPDAAAAAVEKL 267
+YV NL V + L+ IF GT++ ++KD + G S FV F+ AAA A++ +
Sbjct: 7 LYVGNLHPYVNEAVLQDIFSTLGTVSEVRIVKDRATGNSAGSAFVKFEDHQAAAIALKTI 66
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG ++ Y +E ++ F++E+ +++++ NL + D L
Sbjct: 67 NG-----RILY--------NKEVRIQWAFQKEKTEN--TASHSHIFVGNLSGDVADPVLL 111
Query: 328 ELFSEFGTITSCKVMVDQH-GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
+ F G + +VM D G SKG GF +F E A +AL EM+G +G+ + A
Sbjct: 112 QAFQHLGECSDARVMWDHSTGRSKGFGFVSFRTKEAAEKALAEMDGAQVGQWKIRCGWAH 171
Query: 387 RKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGAPRLGPQQLY-----YGQGTPGLMP 441
K E L P + +P + + L YG+ T GL P
Sbjct: 172 HKTEAVTGLDIDTVDRADPANTNVYVGNLP------TEVMEEDLRAAFGAYGEIT-GLKP 224
Query: 442 PQAAGYGF 449
GYGF
Sbjct: 225 CHKGGYGF 232
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 26/173 (15%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
++VG+L +V + L F + + RV D S S G+ +V++ + A A +
Sbjct: 96 IFVGNLSGDVADPVLLQAFQHLGECSDARVMWDHSTGRSKGFGFVSFRTKEAAEKALAEM 155
Query: 90 NFMPINGKPIRIMYSHR----------------DPSIRKSGYGNVFIKNLDTSIDNKALC 133
+ + IR ++H DP+ NV++ NL T + + L
Sbjct: 156 DGAQVGQWKIRCGWAHHKTEAVTGLDIDTVDRADPANT-----NVYVGNLPTEVMEEDLR 210
Query: 134 DTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQV 186
F A+G + K GYGFV + + AA AI +NG + K V
Sbjct: 211 AAFGAYGEITGLKPC-----HKGGYGFVTYRDHSAAVQAIVGMNGKELKGKMV 258
>gi|196013113|ref|XP_002116418.1| hypothetical protein TRIADDRAFT_30761 [Trichoplax adhaerens]
gi|190581009|gb|EDV21088.1| hypothetical protein TRIADDRAFT_30761, partial [Trichoplax
adhaerens]
Length = 102
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/94 (61%), Positives = 76/94 (80%)
Query: 306 KLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATR 365
+ +GANLY+KNLDD+I+D +LKE FS+FG+ITS KVM D+ G SKG GF F+ EEA++
Sbjct: 3 RTQGANLYVKNLDDAIDDARLKEEFSKFGSITSAKVMCDEKGASKGFGFVCFATQEEASK 62
Query: 366 ALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQF 399
A+NEM+G++I KPLYV AQRKEERKA L +Q+
Sbjct: 63 AINEMSGRIIVSKPLYVTFAQRKEERKAFLASQY 96
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N+++KNLD +ID+ L + F+ FG++ S KV D G SKG+GFV F +E A AI +
Sbjct: 8 NLYVKNLDDAIDDARLKEEFSKFGSITSAKVMCDEKGASKGFGFVCFATQEEASKAINEM 67
Query: 177 NGMLINDKQVYVGLFVRRQER 197
+G +I K +YV R++ER
Sbjct: 68 SGRIIVSKPLYVTFAQRKEER 88
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 56/89 (62%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
N+YV NL + + D LK+ F FG+ITSA VM D G S+ FGFV F + + A+ A+ ++
Sbjct: 8 NLYVKNLDDAIDDARLKEEFSKFGSITSAKVMCDEKGASKGFGFVCFATQEEASKAINEM 67
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKF 296
+G K YV AQ++ ER+A L +++
Sbjct: 68 SGRIIVSKPLYVTFAQRKEERKAFLASQY 96
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
+LYV +L+ +++++L + FS+ + S +V D+ K +S G+ +V ++ ++A+ A
Sbjct: 8 NLYVKNLDDAIDDARLKEEFSKFGSITSAKVMCDE-KGASKGFGFVCFATQEEASKAINE 66
Query: 89 LNFMPINGKPIRIMYSHR 106
++ I KP+ + ++ R
Sbjct: 67 MSGRIIVSKPLYVTFAQR 84
>gi|82621116|gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]
Length = 423
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 144/277 (51%), Gaps = 38/277 (13%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
N ++++GDL+Q ++E L+ F+Q +V+SV+V R++ S Y ++ ++ + A
Sbjct: 78 NRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVL 137
Query: 87 EALN--FMPINGKPIRIMYSHRDPSIRKSGYG---------NVFIKNLDTSIDNKALCDT 135
++ N MP +P R+ +S +++ G ++F+ +L + + + L DT
Sbjct: 138 QSYNGTMMPNAEQPFRLNWSAFSTGEKRADVGAAAGSGSDLSIFVGDLASDVTDTMLRDT 197
Query: 136 FAA-FGTVLSCKVAIDSN-GQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVR 193
F++ + +V KV IDSN G+SKGYGFV+F++E A+ +NG+ + + + +G+
Sbjct: 198 FSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIGVATP 257
Query: 194 RQERAQQNVSPKF--------------------TNVYVNNLAETVTDEDLKKIFGHFGTI 233
++ A Q S + T V+V L VTDE+L++ F FG +
Sbjct: 258 KKPSAMQQYSSQGGHASNGAATQTSQTDSDLSNTTVFVGGLDSDVTDEELRQSFSQFGNV 317
Query: 234 TSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGT 270
S +K GK C GFV F AA A+EKLNGT
Sbjct: 318 VS---VKIPAGKG-C-GFVQFSERSAAEDAIEKLNGT 349
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 141/295 (47%), Gaps = 23/295 (7%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKML 176
++I +L +D L FA G V+S KV + GQS+ YGF++F EAA+ ++
Sbjct: 81 IWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQSY 140
Query: 177 NG-MLINDKQVY---VGLFVRRQERAQQNV---SPKFTNVYVNNLAETVTDEDLKKIFG- 228
NG M+ N +Q + F ++RA S +++V +LA VTD L+ F
Sbjct: 141 NGTMMPNAEQPFRLNWSAFSTGEKRADVGAAAGSGSDLSIFVGDLASDVTDTMLRDTFSS 200
Query: 229 HFGTITSAIVMKDSD-GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRA----- 282
+ ++ A V+ DS+ G+S+ +GFV F + A+ ++NG + + +G A
Sbjct: 201 RYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIGVATPKKP 260
Query: 283 ---QKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSC 339
Q+ + + + L +++ LD + DE+L++ FS+FG + S
Sbjct: 261 SAMQQYSSQGGHASNGAATQTSQTDSDLSNTTVFVGGLDSDVTDEELRQSFSQFGNVVSV 320
Query: 340 KVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKAR 394
K+ KG GF FS A A+ ++NG +IG + + ++ + ++ R
Sbjct: 321 KIPA-----GKGCGFVQFSERSAAEDAIEKLNGTVIGTQTVRLSWGRNPANKQFR 370
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 19 AAVPSGYGNVSLYVGDLEQNVNESQLYDLF-SQVAQVVSVRVCRDQSKRSSLGYAYVNYS 77
AA SG ++S++VGDL +V ++ L D F S+ V +V D + S GY +V +
Sbjct: 170 AAAGSG-SDLSIFVGDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFD 228
Query: 78 NPQDAANAKEALNFMPINGKPIRI-MYSHRDPSI-----RKSGYGN-------------- 117
+ + + A +N + + + +RI + + + PS + G+ +
Sbjct: 229 DESERSRAMTEMNGIYCSSRAMRIGVATPKKPSAMQQYSSQGGHASNGAATQTSQTDSDL 288
Query: 118 ----VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAI 173
VF+ LD+ + ++ L +F+ FG V+S K+ KG GFVQF AA++AI
Sbjct: 289 SNTTVFVGGLDSDVTDEELRQSFSQFGNVVSVKIPA-----GKGCGFVQFSERSAAEDAI 343
Query: 174 KMLNGMLINDKQV 186
+ LNG +I + V
Sbjct: 344 EKLNGTVIGTQTV 356
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 18/197 (9%)
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFGFVNFQSPDA 259
N S +++ +L + + + L F G + S V+++ G+S +GF+ F + +A
Sbjct: 73 NGSEDNRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEA 132
Query: 260 AAAAVEKLNGTT--NNDKVWYVG-RAQKRAEREADLRAKFEQERISRYEKLKGANL--YL 314
A ++ NGT N ++ + + A E+ AD+ A G++L ++
Sbjct: 133 AEKVLQSYNGTMMPNAEQPFRLNWSAFSTGEKRADVGAA----------AGSGSDLSIFV 182
Query: 315 KNLDDSINDEKLKELFSE-FGTITSCKVMVDQH-GFSKGSGFAAFSMPEEATRALNEMNG 372
+L + D L++ FS + ++ KV++D + G SKG GF F E +RA+ EMNG
Sbjct: 183 GDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNG 242
Query: 373 KMIGRKPLYVAVAQRKE 389
+ + + VA K+
Sbjct: 243 IYCSSRAMRIGVATPKK 259
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
Query: 5 GAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQS 64
G A+ A T T+ S N +++VG L+ +V + +L FSQ VVSV++
Sbjct: 270 GGHASNGAATQ--TSQTDSDLSNTTVFVGGLDSDVTDEELRQSFSQFGNVVSVKIP---- 323
Query: 65 KRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRK 112
+ G +V +S A +A E LN I + +R+ + R+P+ ++
Sbjct: 324 --AGKGCGFVQFSERSAAEDAIEKLNGTVIGTQTVRLSWG-RNPANKQ 368
>gi|156837090|ref|XP_001642579.1| hypothetical protein Kpol_1075p1a [Vanderwaltozyma polyspora DSM
70294]
gi|156113126|gb|EDO14721.1| hypothetical protein Kpol_1075p1a [Vanderwaltozyma polyspora DSM
70294]
Length = 264
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 99/157 (63%), Gaps = 8/157 (5%)
Query: 291 DLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSK 350
+L+ ++E R+ + K +G NL++KNLDDS++DEKL+E FS FGTI S KVM + G SK
Sbjct: 2 ELKKQYEAARLEKMTKYQGVNLFVKNLDDSVDDEKLQEEFSPFGTIISAKVMRTEDGKSK 61
Query: 351 GSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSP 410
GF FS PEEATRA+ E N +++ KPLYVA+AQRKE R+A+L AQ Q++A M
Sbjct: 62 NFGFVCFSTPEEATRAITEKNQQIVAGKPLYVAIAQRKEVRRAQL-AQ--QVQARNQMRY 118
Query: 411 LASGIPGYHHGAPRLGPQQLYYGQGTPGLMPPQAAGY 447
+ G P Q ++Y G+MPP+ +
Sbjct: 119 QQATAAAAAAGIPGQFLQPMFY-----GVMPPRGVPF 150
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%)
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
N++V NL ++V DE L++ F FGTI SA VM+ DGKS+ FGFV F +P+ A A+ +
Sbjct: 21 VNLFVKNLDDSVDDEKLQEEFSPFGTIISAKVMRTEDGKSKNFGFVCFSTPEEATRAITE 80
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK 306
N K YV AQ++ R A L + + RY++
Sbjct: 81 KNQQIVAGKPLYVAIAQRKEVRRAQLAQQVQARNQMRYQQ 120
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N+F+KNLD S+D++ L + F+ FGT++S KV +G+SK +GFV F E A AI
Sbjct: 22 NLFVKNLDDSVDDEKLQEEFSPFGTIISAKVMRTEDGKSKNFGFVCFSTPEEATRAITEK 81
Query: 177 NGMLINDKQVYVGLF----VRRQERAQQ 200
N ++ K +YV + VRR + AQQ
Sbjct: 82 NQQIVAGKPLYVAIAQRKEVRRAQLAQQ 109
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 23 SGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA 82
+ Y V+L+V +L+ +V++ +L + FS ++S +V R + +S + +V +S P++A
Sbjct: 16 TKYQGVNLFVKNLDDSVDDEKLQEEFSPFGTIISAKVMRTEDGKSK-NFGFVCFSTPEEA 74
Query: 83 ANAKEALNFMPINGKPIRIMYSHR 106
A N + GKP+ + + R
Sbjct: 75 TRAITEKNQQIVAGKPLYVAIAQR 98
>gi|297733643|emb|CBI14890.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 65/77 (84%)
Query: 77 SNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTF 136
SNPQDAA A + LNF P+NGKP+RIMYSHRDPSIRKSG N+FIKNLD ID+KAL DTF
Sbjct: 274 SNPQDAARALDVLNFTPLNGKPLRIMYSHRDPSIRKSGTENIFIKNLDKGIDHKALHDTF 333
Query: 137 AAFGTVLSCKVAIDSNG 153
+AFG +LSCK A D++G
Sbjct: 334 SAFGNILSCKEATDASG 350
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 16/92 (17%)
Query: 256 SPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLK 315
+P AA A++ LN T N K LR + R K N+++K
Sbjct: 275 NPQDAARALDVLNFTPLNGK---------------PLRIMYSH-RDPSIRKSGTENIFIK 318
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVDQHG 347
NLD I+ + L + FS FG I SCK D G
Sbjct: 319 NLDKGIDHKALHDTFSAFGNILSCKEATDASG 350
>gi|347967649|ref|XP_312633.5| AGAP002335-PA [Anopheles gambiae str. PEST]
gi|333468363|gb|EAA07505.5| AGAP002335-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 129/269 (47%), Gaps = 34/269 (12%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
+LYVG+L+ +V E L LFSQ+ V S ++ R+ S +A++ Y+N Q A A A
Sbjct: 9 TLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIRETSIDP---FAFIEYANHQSAQTALAA 65
Query: 89 LNFMPINGKPIRIMYSH---RDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSC 145
+N K IR+ ++ P S + ++F+ +L ID + L + FA FG + +C
Sbjct: 66 MNKRMFLKKEIRVNWATSAGNQPKTDTSQHHHIFVGDLSPEIDTETLREAFAPFGEISNC 125
Query: 146 KVAIDSNG-QSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ--------- 195
++ D +S+GY FV F + A+NAI M+NG + + + R+
Sbjct: 126 RIVRDPQTLKSRGYAFVSFVKKAEAENAIAMMNGQWLGSRSIRTNWSTRKPPAPRENSKG 185
Query: 196 ---------ERAQQNVSPKFTNVYVNNL-AETVTDEDLKKIFGHFGTITSAIVMKDSDGK 245
E N SP T VY +TDE ++K F FG I V KD
Sbjct: 186 IKSGKTPGFEEIYNNTSPTNTTVYCGGFPPNAITDELIQKHFAQFGHINDTRVFKD---- 241
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTTNND 274
+ + F+ F S ++AA A+E GT N++
Sbjct: 242 -KGYAFIRFASKESAARAIE---GTHNSE 266
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 124/258 (48%), Gaps = 16/258 (6%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLN 177
+++ NLDTS+ + LC F+ GTV SCK+ +++ + F+++ N ++AQ A+ +N
Sbjct: 10 LYVGNLDTSVTEELLCTLFSQMGTVKSCKIIRETS--IDPFAFIEYANHQSAQTALAAMN 67
Query: 178 GMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAI 237
+ K++ V + + + S + +++V +L+ + E L++ F FG I++
Sbjct: 68 KRMFLKKEIRVNWATSAGNQPKTDTS-QHHHIFVGDLSPEIDTETLREAFAPFGEISNCR 126
Query: 238 VMKDSDG-KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR--AEREADLRA 294
+++D KSR + FV+F A A+ +NG + + ++ A RE
Sbjct: 127 IVRDPQTLKSRGYAFVSFVKKAEAENAIAMMNGQWLGSRSIRTNWSTRKPPAPRENSKGI 186
Query: 295 KFEQ----ERISRYEKLKGANLYLKNLD-DSINDEKLKELFSEFGTITSCKVMVDQHGFS 349
K + E I +Y ++I DE +++ F++FG I +V D
Sbjct: 187 KSGKTPGFEEIYNNTSPTNTTVYCGGFPPNAITDELIQKHFAQFGHINDTRVFKD----- 241
Query: 350 KGSGFAAFSMPEEATRAL 367
KG F F+ E A RA+
Sbjct: 242 KGYAFIRFASKESAARAI 259
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 88/183 (48%), Gaps = 20/183 (10%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
+YV NL +VT+E L +F GT+ S +++++ F F+ + + +A A+ +N
Sbjct: 10 LYVGNLDTSVTEELLCTLFSQMGTVKSCKIIRETSIDP--FAFIEYANHQSAQTALAAMN 67
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQE--RISRYEKLKGANLYLKNLDDSINDEKL 326
KR + ++R + + + + ++++ +L I+ E L
Sbjct: 68 ---------------KRMFLKKEIRVNWATSAGNQPKTDTSQHHHIFVGDLSPEIDTETL 112
Query: 327 KELFSEFGTITSCKVMVDQHGF-SKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
+E F+ FG I++C+++ D S+G F +F EA A+ MNG+ +G + + +
Sbjct: 113 REAFAPFGEISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIAMMNGQWLGSRSIRTNWS 172
Query: 386 QRK 388
RK
Sbjct: 173 TRK 175
>gi|351699217|gb|EHB02136.1| Polyadenylate-binding protein 4 [Heterocephalus glaber]
Length = 205
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Query: 19 AAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSN 78
AAV S Y SL VGDL + E+ LY+ FS+ V+ +RVC D R SLG+AYV++
Sbjct: 3 AAVRS-YPVASLSVGDLHSDAAEAVLYEKFSRAGPVLPIRVCGDVITRRSLGHAYVSFQQ 61
Query: 79 PQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAA 138
P +A A + +NF I GK I IM+ +DPS+ KSG GNVFIKNLD SIDNKAL DTF+A
Sbjct: 62 PAEAERALDTMNFDGIKGKQIYIMWPQKDPSLTKSGVGNVFIKNLDKSIDNKALYDTFSA 121
Query: 139 F 139
Sbjct: 122 L 122
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 579 VHASKVTGMLLEMDQTEVLHLIESPEALKTKVAEAMAVLQEAAARSD 625
+ A + LEMD +E+LH +ESP++L +KV EA+AVLQ A+ +
Sbjct: 140 IRAWLASSQALEMDNSELLHTLESPKSLHSKVDEAVAVLQAHHAKKE 186
>gi|355709046|gb|AES03463.1| poly binding protein, cytoplasmic 1 [Mustela putorius furo]
Length = 102
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
Query: 278 YVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTIT 337
YVGRAQK+ ER+ +L+ KFEQ + R + +G NLY+KNLDD I+DE+L++ FS FGTIT
Sbjct: 2 YVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTIT 61
Query: 338 SCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKP 379
S KVM+ + G SKG GF FS PEEAT+A+ EMNG+++ KP
Sbjct: 62 SAKVMM-EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 102
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 15/97 (15%)
Query: 186 VYVGLFVRRQERAQQNVSPKF-------------TNVYVNNLAETVTDEDLKKIFGHFGT 232
+YVG ++ ER Q + KF N+YV NL + + DE L+K F FGT
Sbjct: 1 IYVGRAQKKVER-QTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGT 59
Query: 233 ITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNG 269
ITSA VM + G+S+ FGFV F SP+ A AV ++NG
Sbjct: 60 ITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNG 95
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N+++KNLD ID++ L F+ FGT+ S KV ++ G+SKG+GFV F + E A A+ +
Sbjct: 35 NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEM 93
Query: 177 NGMLINDK 184
NG ++ K
Sbjct: 94 NGRIVATK 101
>gi|406602053|emb|CCH46373.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 694
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 106/178 (59%), Gaps = 5/178 (2%)
Query: 116 GNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKM 175
GN++++ L I + L F FG + S K+ D G+SKGYGF+ + + +A +AI
Sbjct: 129 GNIYVRGLGPEITTEDLFKIFEPFGEITSSKIVNDEFGRSKGYGFINYSDGSSADDAISK 188
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPK--FTNVYVNNLAETVTDEDLKKIFGHFGTI 233
LNG+L+N ++Y+ + ++ER Q+ K FTN+Y+ NL T + + +F FG I
Sbjct: 189 LNGLLVNGSKLYLNHHIAKKERIQRIDFEKSNFTNLYIKNLPIDYTIDQFESLFAKFGEI 248
Query: 234 TSAIV--MKDSDGKSRCFGFVNFQSPDAAAAAVEKLNG-TTNNDKVWYVGRAQKRAER 288
+S+ + + D D S+ FGF+NF++ ++A +A+E LN + ++ V RAQ+R ER
Sbjct: 249 SSSFLPDLNDGDQTSKRFGFINFKNHESAISAIESLNNFEISPNQFLSVSRAQRRDER 306
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 98/192 (51%), Gaps = 13/192 (6%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
N+YV L +T EDL KIF FG ITS+ ++ D G+S+ +GF+N+ +A A+ KL
Sbjct: 130 NIYVRGLGPEITTEDLFKIFEPFGEITSSKIVNDEFGRSKGYGFINYSDGSSADDAISKL 189
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG N Y+ + ER +RI +EK NLY+KNL ++ +
Sbjct: 190 NGLLVNGSKLYLNHHIAKKER---------IQRID-FEKSNFTNLYIKNLPIDYTIDQFE 239
Query: 328 ELFSEFGTITSCKV--MVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIG-RKPLYVAV 384
LF++FG I+S + + D SK GF F E A A+ +N I + L V+
Sbjct: 240 SLFAKFGEISSSFLPDLNDGDQTSKRFGFINFKNHESAISAIESLNNFEISPNQFLSVSR 299
Query: 385 AQRKEERKARLQ 396
AQR++ER +
Sbjct: 300 AQRRDERNEQFH 311
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
++YV L + L+ +F ++ S ++ D+ RS GY ++NYS+ A +A
Sbjct: 130 NIYVRGLGPEITTEDLFKIFEPFGEITSSKIVNDEFGRSK-GYGFINYSDGSSADDAISK 188
Query: 89 LNFMPINGKPI----RIMYSHRDPSI--RKSGYGNVFIKNL--DTSIDNKALCDTFAAFG 140
LN + +NG + I R I KS + N++IKNL D +ID FA FG
Sbjct: 189 LNGLLVNGSKLYLNHHIAKKERIQRIDFEKSNFTNLYIKNLPIDYTID--QFESLFAKFG 246
Query: 141 TVLSCKVAI--DSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQ-VYVGLFVRRQER 197
+ S + D + SK +GF+ F+N E+A +AI+ LN I+ Q + V RR ER
Sbjct: 247 EISSSFLPDLNDGDQTSKRFGFINFKNHESAISAIESLNNFEISPNQFLSVSRAQRRDER 306
Query: 198 AQQ 200
+Q
Sbjct: 307 NEQ 309
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 70/142 (49%), Gaps = 12/142 (8%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNE 369
+NLY++NL SI+D L F+ FG I S K+M G S+G GF F EA+RAL
Sbjct: 425 SNLYVRNLAPSIDDSILHSSFAPFGIIVSAKIMTTDEGESRGYGFVCFRTSPEASRALIA 484
Query: 370 MNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRAPGGMSPLASGIPGYHHGA---PRLG 426
M+G ++ + L+V+ AQ+ +++ Q Q P G Y++G P
Sbjct: 485 MHGNVLHGQMLHVSFAQKNNKKRFGKQQQQQIPIHPNG---------SYYNGLYQNPNQP 535
Query: 427 PQQLYYGQGTPGLMPPQAAGYG 448
P Q Y Q + PP GYG
Sbjct: 536 PYQYYNTQAGQPVPPPSGNGYG 557
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Query: 289 EADLRAKFEQERIS-RYEKLKG-ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH 346
E + KF Q IS ++ L N+Y++ L I E L ++F FG ITS K++ D+
Sbjct: 106 EKSFKLKFPQVEISVEFDALTHPGNIYVRGLGPEITTEDLFKIFEPFGEITSSKIVNDEF 165
Query: 347 GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARL 395
G SKG GF +S A A++++NG ++ LY+ K+ER R+
Sbjct: 166 GRSKGYGFINYSDGSSADDAISKLNGLLVNGSKLYLNHHIAKKERIQRI 214
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N++++NL SID+ L +FA FG ++S K+ G+S+GYGFV F A A+ +
Sbjct: 426 NLYVRNLAPSIDDSILHSSFAPFGIIVSAKIMTTDEGESRGYGFVCFRTSPEASRALIAM 485
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKF 206
+G +++ + ++V AQ+N +F
Sbjct: 486 HGNVLHGQMLHVSF-------AQKNNKKRF 508
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%)
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
+N+YV NLA ++ D L F FG I SA +M +G+SR +GFV F++ A+ A+
Sbjct: 425 SNLYVRNLAPSIDDSILHSSFAPFGIIVSAKIMTTDEGESRGYGFVCFRTSPEASRALIA 484
Query: 267 LNGTTNNDKVWYVGRAQKRAER 288
++G + ++ +V AQK ++
Sbjct: 485 MHGNVLHGQMLHVSFAQKNNKK 506
>gi|432101459|gb|ELK29641.1| Polyadenylate-binding protein 4 [Myotis davidii]
Length = 146
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 96/141 (68%), Gaps = 8/141 (5%)
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQ---ERISRYEKLKGANLYLKNLDDSIND 323
+NG + KV VG AQK E++A+L+ KFEQ ERISRY+ G NLY+KNLDD++ D
Sbjct: 1 MNGKDISGKVISVGCAQKTVEQQAELKWKFEQLKQERISRYQ---GVNLYIKNLDDTVGD 57
Query: 324 EKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVA 383
E L++ FS FG+ITS KVM+ + G SKG GF FS P EA +A+ +MNG ++ KPLYVA
Sbjct: 58 ENLRKEFSPFGSITSAKVML-EDGRSKGFGFVCFSSP-EAIKAVTKMNGCVMSSKPLYVA 115
Query: 384 VAQRKEERKARLQAQFAQIRA 404
+A+R+ + A L Q Q A
Sbjct: 116 LARRRGKGSAYLTDQDMQWVA 136
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 73/130 (56%), Gaps = 16/130 (12%)
Query: 176 LNGMLINDKQVYVGLFVRRQERAQQNVSPKF-------------TNVYVNNLAETVTDED 222
+NG I+ K + VG + E+ Q + KF N+Y+ NL +TV DE+
Sbjct: 1 MNGKDISGKVISVGCAQKTVEQ-QAELKWKFEQLKQERISRYQGVNLYIKNLDDTVGDEN 59
Query: 223 LKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRA 282
L+K F FG+ITSA VM + DG+S+ FGFV F SP+ A AV K+NG + K YV A
Sbjct: 60 LRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPE-AIKAVTKMNGCVMSSKPLYVALA 117
Query: 283 QKRAEREADL 292
++R + A L
Sbjct: 118 RRRGKGSAYL 127
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N++IKNLD ++ ++ L F+ FG++ S KV ++ +G+SKG+GFV F + EA + KM
Sbjct: 45 NLYIKNLDDTVGDENLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEAIKAVTKM- 102
Query: 177 NGMLINDKQVYVGLFVRR 194
NG +++ K +YV L RR
Sbjct: 103 NGCVMSSKPLYVALARRR 120
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 34/269 (12%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
+LYVG+L+Q+V E L LF Q+ V S ++ R+ SS YA++ Y++ Q A A A
Sbjct: 9 TLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIRE---ASSDPYAFIEYASHQSAQTALAA 65
Query: 89 LNFMPINGKPIRIMYSH---RDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSC 145
+N K I++ ++ P S + ++F+ +L I+ + L + FA FG + +C
Sbjct: 66 MNKRLFLKKEIKVNWATSPGNQPKTDTSQHHHIFVGDLSPEIETETLREAFAPFGEISNC 125
Query: 146 KVAIDSNG-QSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ--------- 195
++ D +SKGY FV F + A+NAI+M+NG + + + R+
Sbjct: 126 RIVRDPQTLKSKGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKPPAPRENTKG 185
Query: 196 ---------ERAQQNVSPKFTNVYVNNL-AETVTDEDLKKIFGHFGTITSAIVMKDSDGK 245
E N P T VY T++D +K FG FG+I V KD
Sbjct: 186 IKSGKTPGFEEIYNNTGPTNTTVYCGGFPPNTISDNLIKTHFGQFGSIHDVRVFKD---- 241
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTTNND 274
+ + F+ F S +AAA A+E GT N++
Sbjct: 242 -KGYAFIKFISKEAAARAIE---GTHNSE 266
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 120/258 (46%), Gaps = 16/258 (6%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLN 177
+++ NLD S+ LC F G V SCK+ +++ S Y F+++ + ++AQ A+ +N
Sbjct: 10 LYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREAS--SDPYAFIEYASHQSAQTALAAMN 67
Query: 178 GMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAI 237
L K++ V + + + S + +++V +L+ + E L++ F FG I++
Sbjct: 68 KRLFLKKEIKVNWATSPGNQPKTDTS-QHHHIFVGDLSPEIETETLREAFAPFGEISNCR 126
Query: 238 VMKDSDG-KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKF 296
+++D KS+ + FV+F A A++ +NG + + ++ +
Sbjct: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKPPAPRENTKGI 186
Query: 297 EQERISRYEKL------KGANLYLKNLD-DSINDEKLKELFSEFGTITSCKVMVDQHGFS 349
+ + +E++ +Y ++I+D +K F +FG+I +V D
Sbjct: 187 KSGKTPGFEEIYNNTGPTNTTVYCGGFPPNTISDNLIKTHFGQFGSIHDVRVFKD----- 241
Query: 350 KGSGFAAFSMPEEATRAL 367
KG F F E A RA+
Sbjct: 242 KGYAFIKFISKEAAARAI 259
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 89/183 (48%), Gaps = 20/183 (10%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
+YV NL ++VT++ L +FG G + S +++++ S + F+ + S +A A+ +N
Sbjct: 10 LYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREAS--SDPYAFIEYASHQSAQTALAAMN 67
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQE--RISRYEKLKGANLYLKNLDDSINDEKL 326
KR + +++ + + + + ++++ +L I E L
Sbjct: 68 ---------------KRLFLKKEIKVNWATSPGNQPKTDTSQHHHIFVGDLSPEIETETL 112
Query: 327 KELFSEFGTITSCKVMVDQHGF-SKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
+E F+ FG I++C+++ D SKG F +F EA A+ MNG+ +G + + +
Sbjct: 113 REAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWS 172
Query: 386 QRK 388
RK
Sbjct: 173 TRK 175
>gi|123407360|ref|XP_001302992.1| embryonic poly [Trichomonas vaginalis G3]
gi|121884333|gb|EAX90062.1| embryonic poly, putative [Trichomonas vaginalis G3]
Length = 426
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 127/236 (53%), Gaps = 16/236 (6%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
++VGDL +V+E+ + ++F S V + K +A+V + + + A A +
Sbjct: 8 VFVGDLPGSVDENFIKEIFKDYGSFPSGTVTVKKHKSLDKSFAFVTFESHELAKRAISEV 67
Query: 90 NFMPINGKPIRIMYSHRDPSIR---KSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
N+ ++G PIRI++S DP + K+ G +FI+ LD +I+ L D F+ FG ++SCK
Sbjct: 68 NYTKLDGVPIRILWS--DPGTKRAIKNNVGALFIRGLDENIEVSQLHDAFSNFGEIVSCK 125
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF 206
+ + +NG+S+GYGF+ F E+ A+ A L IN K + + + Q+ ++N F
Sbjct: 126 IPL-TNGKSRGYGFITFYKEDDAKRAKTDLADASINGKPIQIEFY---QKPTRKNPEETF 181
Query: 207 TNVYVNNLAETV--TDEDLKKIFGHFGTIT-----SAIVMKDSDGKSRCFGFVNFQ 255
TNV++ L + TD+DL F FG + + + DG S FGF++F+
Sbjct: 182 TNVFIKPLPADIFKTDDDLANFFKEFGDFVVTGKANPAIKRKEDGSSCEFGFLHFK 237
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 17/187 (9%)
Query: 202 VSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIV-MKDSDGKSRCFGFVNFQSPDAA 260
+ P + V+V +L +V + +K+IF +G+ S V +K + F FV F+S + A
Sbjct: 1 MDPNWKEVFVGDLPGSVDENFIKEIFKDYGSFPSGTVTVKKHKSLDKSFAFVTFESHELA 60
Query: 261 AAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDS 320
A+ ++N T + +R + R K L+++ LD++
Sbjct: 61 KRAISEVNYTKLDG---------------VPIRILWSDPGTKRAIKNNVGALFIRGLDEN 105
Query: 321 INDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPL 380
I +L + FS FG I SCK+ + +G S+G GF F ++A RA ++ I KP+
Sbjct: 106 IEVSQLHDAFSNFGEIVSCKIPL-TNGKSRGYGFITFYKEDDAKRAKTDLADASINGKPI 164
Query: 381 YVAVAQR 387
+ Q+
Sbjct: 165 QIEFYQK 171
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 16 ATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVN 75
T A+ + G +L++ L++N+ SQL+D FS ++VS ++ K S GY ++
Sbjct: 85 GTKRAIKNNVG--ALFIRGLDENIEVSQLHDAFSNFGEIVSCKIPLTNGK--SRGYGFIT 140
Query: 76 YSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIR--KSGYGNVFIKNLDTSI--DNKA 131
+ DA AK L INGKPI+I + ++ P+ + + + NVFIK L I +
Sbjct: 141 FYKEDDAKRAKTDLADASINGKPIQIEF-YQKPTRKNPEETFTNVFIKPLPADIFKTDDD 199
Query: 132 LCDTFAAFGT-VLSCK----VAIDSNGQSKGYGFVQFENEE 167
L + F FG V++ K + +G S +GF+ F++ E
Sbjct: 200 LANFFKEFGDFVVTGKANPAIKRKEDGSSCEFGFLHFKHHE 240
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 22/223 (9%)
Query: 115 YGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQ-SKGYGFVQFENEEAAQNAI 173
+ VF+ +L S+D + + F +G+ S V + + K + FV FE+ E A+ AI
Sbjct: 5 WKEVFVGDLPGSVDENFIKEIFKDYGSFPSGTVTVKKHKSLDKSFAFVTFESHELAKRAI 64
Query: 174 KMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTI 233
+N ++ + + +RA +N +++ L E + L F +FG I
Sbjct: 65 SEVNYTKLDGVPIRILWSDPGTKRAIKN---NVGALFIRGLDENIEVSQLHDAFSNFGEI 121
Query: 234 TSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLR 293
S + ++GKSR +GF+ F D A A L + N K ++
Sbjct: 122 VSCKIPL-TNGKSRGYGFITFYKEDDAKRAKTDLADASINGK---------------PIQ 165
Query: 294 AKFEQERISRYEKLKGANLYLKNLDDSI--NDEKLKELFSEFG 334
+F Q+ + + N+++K L I D+ L F EFG
Sbjct: 166 IEFYQKPTRKNPEETFTNVFIKPLPADIFKTDDDLANFFKEFG 208
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 154 QSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS 203
+SKG+GFV F+ +E+AQNA++ +N K Y+GLF ++ER ++ S
Sbjct: 283 ESKGFGFVLFKTKESAQNALENAVITPLNGKTPYIGLFKMKEEREREKAS 332
>gi|294928940|ref|XP_002779243.1| Glycine-rich RNA-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239888268|gb|EER11038.1| Glycine-rich RNA-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 238
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 95/147 (64%), Gaps = 8/147 (5%)
Query: 278 YVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTIT 337
YV RAQ +AER A L+ +F + ++ + G NLY+KNL ++++D +LK +F FGTIT
Sbjct: 51 YVARAQSKAERAAVLKEQFAAGKGAQGGRFGGVNLYVKNLGETVDDNELKRMFEPFGTIT 110
Query: 338 SCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKARLQA 397
S KVM D G S+G GF FS EEAT+A+ +M+ K+IG KPLYV + +++E+R RLQ
Sbjct: 111 SVKVMTDDKGVSRGFGFVCFSTHEEATKAVTDMHLKLIGGKPLYVGMHEKREQRLERLQQ 170
Query: 398 QFAQIRAPGGMSPLASGIPGYHHGAPR 424
++ +P + G+++G PR
Sbjct: 171 RY--------RAPPQHEMGGFNNGLPR 189
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 53/90 (58%)
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
N+YV NL ETV D +LK++F FGTITS VM D G SR FGFV F + + A AV
Sbjct: 83 VNLYVKNLGETVDDNELKRMFEPFGTITSVKVMTDDKGVSRGFGFVCFSTHEEATKAVTD 142
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKF 296
++ K YVG +KR +R L+ ++
Sbjct: 143 MHLKLIGGKPLYVGMHEKREQRLERLQQRY 172
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N+++KNL ++D+ L F FGT+ S KV D G S+G+GFV F E A A+ +
Sbjct: 84 NLYVKNLGETVDDNELKRMFEPFGTITSVKVMTDDKGVSRGFGFVCFSTHEEATKAVTDM 143
Query: 177 NGMLINDKQVYVGLFVRRQERAQQ 200
+ LI K +YVG+ +R++R ++
Sbjct: 144 HLKLIGGKPLYVGMHEKREQRLER 167
>gi|403355351|gb|EJY77251.1| Polyadenylate-binding protein, cytoplasmic and nuclear [Oxytricha
trifallax]
Length = 712
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 155/318 (48%), Gaps = 47/318 (14%)
Query: 71 YAYVNYSNPQDAANAKEALNFMPINGKPIRIM-YS-----------HRDPSIRK--SGYG 116
+AYV + + + + LN+ I K R++ YS H S K
Sbjct: 15 FAYVCFKSQEHVDKCLQILNYPRIKDKCCRVLRYSIKLAKSQQFQDHHASSAAKFFPTDS 74
Query: 117 NVFIKNLD-TSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKM 175
+F+K + ++ L F FG V+S KV+ID+N QSKGYG+VQF + A A++M
Sbjct: 75 QLFVKGFKPLNWTHEDLTMNFKQFGEVVSAKVSIDANHQSKGYGYVQFSQKSNALKAMEM 134
Query: 176 LNGMLINDK-----QVYVGLFVRRQERAQQNVSPKFTNVYVNNLAE-TVTDEDLKKIFGH 229
+NG ++ ++Y V+ + + QN N+YV N TD++L H
Sbjct: 135 MNGKTFGNEIVLSVKLYNSSLVKEKSKKVQN------NLYVKNFPTLDFTDQEL-----H 183
Query: 230 FGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAERE 289
+G + +A +MKDS G ++ FGFV FQS + A A++ ++ TT YV AQ + ER
Sbjct: 184 YGPLINAQIMKDSQGNTKGFGFVCFQSAEDAQKALQDISSTTQ----IYVTEAQSKEERM 239
Query: 290 ADLRAKFEQERISRYEKLKGANLYLKNLDDS-INDEKLKELFSEFGTITSCKVMVDQHGF 348
++L+ K +S + NLY+K D + I D+ LK F +G + + K+
Sbjct: 240 SELQRK----NLSFKKSTMYQNLYVKGFDKNIITDDLLKIHFEAYGEVKNAKIT------ 289
Query: 349 SKGSGFAAFSMPEEATRA 366
S G+ + F E A +A
Sbjct: 290 SNGTAYVCFFDRESARKA 307
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 112/252 (44%), Gaps = 36/252 (14%)
Query: 158 YGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQ----------NVSPKFT 207
+ +V F+++E +++LN I DK V + + ++QQ P +
Sbjct: 15 FAYVCFKSQEHVDKCLQILNYPRIKDKCCRVLRYSIKLAKSQQFQDHHASSAAKFFPTDS 74
Query: 208 NVYVNNLAE-TVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
++V T EDL F FG + SA V D++ +S+ +G+V F A A+E
Sbjct: 75 QLFVKGFKPLNWTHEDLTMNFKQFGEVVSAKVSIDANHQSKGYGYVQFSQKSNALKAMEM 134
Query: 267 LNGTT-NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDD-SINDE 324
+NG T N+ V V +E + + NLY+KN D+
Sbjct: 135 MNGKTFGNEIVLSVKLYNSSLVKEKSKKVQ--------------NNLYVKNFPTLDFTDQ 180
Query: 325 KLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAV 384
+L +G + + ++M D G +KG GF F E+A +AL +++ +YV
Sbjct: 181 EL-----HYGPLINAQIMKDSQGNTKGFGFVCFQSAEDAQKALQDISSTT----QIYVTE 231
Query: 385 AQRKEERKARLQ 396
AQ KEER + LQ
Sbjct: 232 AQSKEERMSELQ 243
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 48 FSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEALNFMPINGK---PIRIMYS 104
F Q +VVS +V D + +S GY YV +S +A A E +N + +++ S
Sbjct: 95 FKQFGEVVSAKVSIDANHQSK-GYGYVQFSQKSNALKAMEMMNGKTFGNEIVLSVKLYNS 153
Query: 105 HRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFE 164
K N+++KN T +D D +G +++ ++ DS G +KG+GFV F+
Sbjct: 154 SLVKEKSKKVQNNLYVKNFPT-LD---FTDQELHYGPLINAQIMKDSQGNTKGFGFVCFQ 209
Query: 165 NEEAAQNAIKMLNGMLINDKQVYVGLFVRRQER----AQQNVSPK----FTNVYVNNLAE 216
+ E AQ A++ ++ Q+YV ++ER ++N+S K + N+YV +
Sbjct: 210 SAEDAQKALQDISSTT----QIYVTEAQSKEERMSELQRKNLSFKKSTMYQNLYVKGFDK 265
Query: 217 TVTDEDLKKI-FGHFGTITSAIVMKDSDGKSR-CF 249
+ +DL KI F +G + +A + S+G + CF
Sbjct: 266 NIITDDLLKIHFEAYGEVKNAKIT--SNGTAYVCF 298
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 7/135 (5%)
Query: 245 KSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRY 304
K+ F +V F+S + ++ LN DK V R + + +F+ S
Sbjct: 11 KNFYFAYVCFKSQEHVDKCLQILNYPRIKDKCCRVLRYSIKLAKSQ----QFQDHHASSA 66
Query: 305 EKL--KGANLYLKNLDD-SINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPE 361
K + L++K + E L F +FG + S KV +D + SKG G+ FS
Sbjct: 67 AKFFPTDSQLFVKGFKPLNWTHEDLTMNFKQFGEVVSAKVSIDANHQSKGYGYVQFSQKS 126
Query: 362 EATRALNEMNGKMIG 376
A +A+ MNGK G
Sbjct: 127 NALKAMEMMNGKTFG 141
>gi|255720292|ref|XP_002556426.1| KLTH0H12958p [Lachancea thermotolerans]
gi|238942392|emb|CAR30564.1| KLTH0H12958p [Lachancea thermotolerans CBS 6340]
Length = 639
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 145/321 (45%), Gaps = 50/321 (15%)
Query: 4 TGAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQ 63
+G+A + V + +G SL++GDL++ V E L FS + SV++C D
Sbjct: 70 SGSADSAIVVKQGAKDHLTAGPSISSLFIGDLDKGVTEKMLLHAFSGFKTLASVKICIDS 129
Query: 64 SKRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL 123
+ SLGY Y+N+++ Q+A A E +++ + GK +RIM S R+ RK+ NVF NL
Sbjct: 130 ETKKSLGYGYLNFTSAQEADEAIEKFSYVKLFGKEVRIMPSMRNSYFRKNIGTNVFFTNL 189
Query: 124 ---DTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGML 180
+ ++ + ++F +G VLSCK+ + K GFV FE++ +A+ AI N
Sbjct: 190 PLENPALTTRVFYESFRKYGRVLSCKL-----DRRKNIGFVYFESDISAKKAIDDFNSRE 244
Query: 181 INDKQVYVGLFVRRQERAQQNVSPKF---------------------------------- 206
++ GL + R SP+F
Sbjct: 245 YFGNKIACGLHFDKDIRK----SPQFEKRRSKLEGLTVIKESLESEACTDSNSLGDSPGP 300
Query: 207 ---TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAA 263
T+V+V NL V +EDL F G I S K +D + +GF+ ++ A
Sbjct: 301 TPSTSVHVKNLPIGVCNEDLLNYFSKVGPIKSVYTSK-ADVYTTSWGFITYKRSRDTIRA 359
Query: 264 VEKLNGTTNNDKVWYVGRAQK 284
+E+LNG K V RA K
Sbjct: 360 LEELNGAIFMGKRVEVTRAVK 380
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 137/318 (43%), Gaps = 53/318 (16%)
Query: 108 PSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENE 166
PSI ++FI +LD + K L F+ F T+ S K+ IDS +S GYG++ F +
Sbjct: 91 PSI-----SSLFIGDLDKGVTEKMLLHAFSGFKTLASVKICIDSETKKSLGYGYLNFTSA 145
Query: 167 EAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLA---ETVTDEDL 223
+ A AI+ + + + K+V + + R ++N+ TNV+ NL +T
Sbjct: 146 QEADEAIEKFSYVKLFGKEVRI-MPSMRNSYFRKNIG---TNVFFTNLPLENPALTTRVF 201
Query: 224 KKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQ 283
+ F +G + S + + + GFV F+S +A A++ N + ++ +
Sbjct: 202 YESFRKYGRVLSCKL-----DRRKNIGFVYFESDISAKKAIDDFNS-----REYFGNKIA 251
Query: 284 KRAEREADLRA--KFEQERISRYEKLK-------------------------GANLYLKN 316
+ D+R +FE+ R S+ E L ++++KN
Sbjct: 252 CGLHFDKDIRKSPQFEKRR-SKLEGLTVIKESLESEACTDSNSLGDSPGPTPSTSVHVKN 310
Query: 317 LDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKM-I 375
L + +E L FS+ G I S ++ GF + + RAL E+NG + +
Sbjct: 311 LPIGVCNEDLLNYFSKVGPIKSV-YTSKADVYTTSWGFITYKRSRDTIRALEELNGAIFM 369
Query: 376 GRKPLYVAVAQRKEERKA 393
G++ + ERK+
Sbjct: 370 GKRVEVTRAVKYNGERKS 387
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 85/189 (44%), Gaps = 25/189 (13%)
Query: 189 GLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSR 247
+ V++ + P +++++ +L + VT++ L F F T+ S + DS+ KS
Sbjct: 76 AIVVKQGAKDHLTAGPSISSLFIGDLDKGVTEKMLLHAFSGFKTLASVKICIDSETKKSL 135
Query: 248 CFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKL 307
+G++NF S A A+EK + YV K +R + ++ I
Sbjct: 136 GYGYLNFTSAQEADEAIEKFS---------YVKLFGKEVRIMPSMRNSYFRKNI------ 180
Query: 308 KGANLYLKNL---DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEAT 364
G N++ NL + ++ E F ++G + SCK +D+ K GF F A
Sbjct: 181 -GTNVFFTNLPLENPALTTRVFYESFRKYGRVLSCK--LDRR---KNIGFVYFESDISAK 234
Query: 365 RALNEMNGK 373
+A+++ N +
Sbjct: 235 KAIDDFNSR 243
>gi|350536139|ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum]
gi|40804404|gb|AAR91698.1| DNA-binding protein [Solanum lycopersicum]
Length = 428
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 143/282 (50%), Gaps = 43/282 (15%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
N ++++GDL+Q ++E L+ F+Q +V+SV+V R++ S Y ++ ++ + A
Sbjct: 78 NRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVL 137
Query: 87 EALN--FMPINGKPIRIMYSHRDPSIRKSGYG---------NVFIKNLDTSIDNKALCDT 135
++ N MP +P R+ +S +++ G ++F+ +L + + + L DT
Sbjct: 138 QSYNGTMMPNAEQPFRLNWSAFSSGEKRADVGAGAGSGSDLSIFVGDLASDVTDTMLRDT 197
Query: 136 FAA-FGTVLSCKVAIDSN-GQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVR 193
F++ + +V KV IDSN G+SKGYGFV+F++E A+ +NG+ + + + +G+
Sbjct: 198 FSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIGVATP 257
Query: 194 RQERAQQNVSPKF-------------------------TNVYVNNLAETVTDEDLKKIFG 228
++ Q P+ T V+V L VTDE+L++ F
Sbjct: 258 KKPSPMQQYFPQAVILAGGHASNGAATQTSQTDSDLSNTTVFVGGLDSEVTDEELRQSFS 317
Query: 229 HFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGT 270
FG + S +K GK C GFV F AA A+EKLNGT
Sbjct: 318 QFGNVVS---VKIPAGKG-C-GFVQFSERSAAEDAIEKLNGT 354
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 145/305 (47%), Gaps = 32/305 (10%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKML 176
++I +L +D L FA G V+S KV + GQS+ YGF++F EAA+ ++
Sbjct: 81 IWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQSY 140
Query: 177 NG-MLINDKQVY---VGLFVRRQERAQQNV---SPKFTNVYVNNLAETVTDEDLKKIFG- 228
NG M+ N +Q + F ++RA S +++V +LA VTD L+ F
Sbjct: 141 NGTMMPNAEQPFRLNWSAFSSGEKRADVGAGAGSGSDLSIFVGDLASDVTDTMLRDTFSS 200
Query: 229 HFGTITSAIVMKDSD-GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAE 287
+ ++ A V+ DS+ G+S+ +GFV F + A+ ++NG + + +G A +
Sbjct: 201 RYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIGVATPK-- 258
Query: 288 READLRAKFEQERI---------------SRYEKLKGANLYLKNLDDSINDEKLKELFSE 332
+ + ++ F Q I L +++ LD + DE+L++ FS+
Sbjct: 259 KPSPMQQYFPQAVILAGGHASNGAATQTSQTDSDLSNTTVFVGGLDSEVTDEELRQSFSQ 318
Query: 333 FGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERK 392
FG + S K+ KG GF FS A A+ ++NG +IG + + ++ + ++
Sbjct: 319 FGNVVSVKIPA-----GKGCGFVQFSERSAAEDAIEKLNGTVIGAQTVRLSWGRNPANKQ 373
Query: 393 ARLQA 397
R +
Sbjct: 374 FRTDS 378
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 35/190 (18%)
Query: 27 NVSLYVGDLEQNVNESQLYDLF-SQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANA 85
++S++VGDL +V ++ L D F S+ V +V D + S GY +V + + + + A
Sbjct: 177 DLSIFVGDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRA 236
Query: 86 KEALNFMPINGKPIRI-MYSHRDPS----------IRKSGYGN----------------- 117
+N + + + +RI + + + PS I G+ +
Sbjct: 237 MTEMNGIYCSSRAMRIGVATPKKPSPMQQYFPQAVILAGGHASNGAATQTSQTDSDLSNT 296
Query: 118 -VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
VF+ LD+ + ++ L +F+ FG V+S K+ KG GFVQF AA++AI+ L
Sbjct: 297 TVFVGGLDSEVTDEELRQSFSQFGNVVSVKIPA-----GKGCGFVQFSERSAAEDAIEKL 351
Query: 177 NGMLINDKQV 186
NG +I + V
Sbjct: 352 NGTVIGAQTV 361
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 18/197 (9%)
Query: 201 NVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFGFVNFQSPDA 259
N S +++ +L + + + L F G + S V+++ G+S +GF+ F + +A
Sbjct: 73 NASEDNRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEA 132
Query: 260 AAAAVEKLNGTT--NNDKVWYVG-RAQKRAEREADLRAKFEQERISRYEKLKGANL--YL 314
A ++ NGT N ++ + + A E+ AD+ A G++L ++
Sbjct: 133 AEKVLQSYNGTMMPNAEQPFRLNWSAFSSGEKRADVGAG----------AGSGSDLSIFV 182
Query: 315 KNLDDSINDEKLKELFSE-FGTITSCKVMVDQH-GFSKGSGFAAFSMPEEATRALNEMNG 372
+L + D L++ FS + ++ KV++D + G SKG GF F E +RA+ EMNG
Sbjct: 183 GDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNG 242
Query: 373 KMIGRKPLYVAVAQRKE 389
+ + + VA K+
Sbjct: 243 IYCSSRAMRIGVATPKK 259
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 5 GAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQS 64
G A+ A T T+ S N +++VG L+ V + +L FSQ VVSV++
Sbjct: 275 GGHASNGAATQ--TSQTDSDLSNTTVFVGGLDSEVTDEELRQSFSQFGNVVSVKIP---- 328
Query: 65 KRSSLGYAYVNYSNPQDAANAKEALNFMPINGKPIRIMYSHRDPSIRK 112
+ G +V +S A +A E LN I + +R+ + R+P+ ++
Sbjct: 329 --AGKGCGFVQFSERSAAEDAIEKLNGTVIGAQTVRLSWG-RNPANKQ 373
>gi|145501335|ref|XP_001436649.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403791|emb|CAK69252.1| unnamed protein product [Paramecium tetraurelia]
Length = 620
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 171/367 (46%), Gaps = 49/367 (13%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
L+V DLE+ + E QLY F + Q+ V++ R S YA++ +S+ ++A AKEA+
Sbjct: 57 LHVSDLEEGITEEQLYVEFRKFGQISFVKLHRYPFIGKSKHYAFIYFSSQEEARKAKEAM 116
Query: 90 NFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAI 149
N+ + +P+RI Y N+F + ++ K L + F +G V+S K++
Sbjct: 117 NYKQLLREPMRITYIQ-----EYEKDANLFFAGFELTVTLKQLEEFFLKWGQVVSVKLST 171
Query: 150 DSNGQSKGYGFVQFENEEAAQNAI-KMLNGMLINDK--QVYVGLFVRRQERAQQNVSPKF 206
D N +S+GYG+VQFE +E A + + +G ++ ++ ++ + FV+ + Q + K
Sbjct: 172 DENKKSRGYGWVQFEKKEQANELLAESTDGTIVYNENTKIIIKRFVK---KGQTDREDKR 228
Query: 207 TNVYVNNLAETVTDEDLK-----------------KIFGHFGTITSAIVMKDSDGKSRCF 249
N+Y+ N T+ + DL+ + F +G I S +V D + K+ F
Sbjct: 229 NNLYIKNFWPTLDNYDLENAEVRESLEKEMREKLNEWFKGYGQIVSILVKIDVERKA-PF 287
Query: 250 GFVNFQSPDAAAAAVEKLNGTTNND-----KVWYVGRAQKRAEREADLRAKFEQERISRY 304
FV+F A A +L T D ++ YVG AQ + +R+ R
Sbjct: 288 AFVSFNRHQDAKEAQRELGTTQKRDPLSTGRMMYVGWAQTKTDRKQ-----------QRD 336
Query: 305 EKLKGANLYLKNLDDSINDEKLKELFSE--FGTITSCKVMVDQHGFSK--GSGFAAFSMP 360
+ +Y +L ++ +E ++ E +G I ++ Q GF + G+ F
Sbjct: 337 NNIFAKYIYADHLSRNVTEEMIRTTLKECGYGDIQMIRLEKMQQGFQQIIRIGYIVFDQA 396
Query: 361 EEATRAL 367
+A + +
Sbjct: 397 SDANKLV 403
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 123/283 (43%), Gaps = 40/283 (14%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDA---- 82
+ +L+ E V QL + F + QVVSV++ D++K+S GY +V + + A
Sbjct: 137 DANLFFAGFELTVTLKQLEEFFLKWGQVVSVKLSTDENKKSR-GYGWVQFEKKEQANELL 195
Query: 83 ANAKEALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDN------------- 129
A + + N K I + + + R+ N++IKN ++DN
Sbjct: 196 AESTDGTIVYNENTKIIIKRFVKKGQTDREDKRNNLYIKNFWPTLDNYDLENAEVRESLE 255
Query: 130 ----KALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIND-- 183
+ L + F +G ++S V ID ++ + FV F + A+ A + L D
Sbjct: 256 KEMREKLNEWFKGYGQIVSILVKIDVERKA-PFAFVSFNRHQDAKEAQRELGTTQKRDPL 314
Query: 184 ---KQVYVGLFVRRQERAQQ---NVSPKFTNVYVNNLAETVTDEDLKKIFGH--FGTITS 235
+ +YVG + +R QQ N+ K+ +Y ++L+ VT+E ++ +G I
Sbjct: 315 STGRMMYVGWAQTKTDRKQQRDNNIFAKY--IYADHLSRNVTEEMIRTTLKECGYGDIQM 372
Query: 236 AIVMKDSDGKSRC--FGFVNFQSPDAAAAAVEKLNGTTNNDKV 276
+ K G + G++ F D A+ A + + N+K
Sbjct: 373 IRLEKMQQGFQQIIRIGYIVF---DQASDANKLVKNFKENEKF 412
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 22/167 (13%)
Query: 204 PKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMK-DSDGKSRCFGFVNFQSPDAAAA 262
P ++V++L E +T+E L F FG I+ + + GKS+ + F+ F S + A
Sbjct: 52 PSQNGLHVSDLEEGITEEQLYVEFRKFGQISFVKLHRYPFIGKSKHYAFIYFSSQEEARK 111
Query: 263 AVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSIN 322
A E +N K+ RE +R + QE YE K ANL+ + ++
Sbjct: 112 AKEAMN--------------YKQLLREP-MRITYIQE----YE--KDANLFFAGFELTVT 150
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNE 369
++L+E F ++G + S K+ D++ S+G G+ F E+A L E
Sbjct: 151 LKQLEEFFLKWGQVVSVKLSTDENKKSRGYGWVQFEKKEQANELLAE 197
>gi|406606068|emb|CCH42541.1| Polyadenylate-binding protein 1 [Wickerhamomyces ciferrii]
Length = 787
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 178/419 (42%), Gaps = 87/419 (20%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
V+LYVGDL+Q V E L LF++ +S ++C + R SLGY YVN+S+ DA A E
Sbjct: 135 VTLYVGDLDQKVTEKSLSSLFTKYESFLSAKLCYSPTTRLSLGYGYVNFSSDTDANRATE 194
Query: 88 ALNFMPINGKPIRIM--YSHRDPSIRKSGYGNVFIKNLDT-SIDNKALCDTFAAFGTVLS 144
LN+ + K IRIM +D S + NVF+ NL+T + + + F G +LS
Sbjct: 195 DLNYTLVANKEIRIMPYVKGKDKSFMST---NVFVSNLNTRELTLRLFYERFRHVGKILS 251
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL-------------- 190
CK+ + K GF+ FE+++ A++ +K N LI+ ++ +
Sbjct: 252 CKLDV-----RKRQGFISFESKDTAEDFVKNYNTALIDGCNIHCSIHIPKSLRNFSSDYN 306
Query: 191 --------------------------------FVRRQERAQQNVSPK---FTNVYVNNLA 215
V +R + PK F +YV L
Sbjct: 307 GGEVSKSQSYSESLKSIKPSLVKSNTEESLTTIVHTPKRPENESHPKDEEFNQIYVKGLP 366
Query: 216 ETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDK 275
TVTD+++ IF FG I ++ KS + V F++ +A A+E + + K
Sbjct: 367 ITVTDDEIDAIFEPFGRIMEIYKETVANFKS-TWCLVTFETHQSAVNAIENCHKVSYKGK 425
Query: 276 VWYVGRAQKRAEREADLRAK-----------FEQERIS---------RYEKLKGANLYLK 315
+A K+AER+ L +K ER S + K+ NL++
Sbjct: 426 NITCVKALKKAERQKILNSKPILQTPSPPKQLFNERESNNSFTQIHEKANKVNSTNLFVY 485
Query: 316 NLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGS--GFAAFSMPEEATRALNEMNG 372
NL S+N+ K LF T+ V + F +G+ + F +A ++NG
Sbjct: 486 NLPHSVNENFFK-LFLRSYTLDG---RVIKFSFQRGANENYIEFEKKSDAVTIHQKLNG 540
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD-QHGFSKGSGFAAFSMPEE 362
YE LY+ +LD + ++ L LF+++ + S K+ S G G+ FS +
Sbjct: 129 YENNTTVTLYVGDLDQKVTEKSLSSLFTKYESFLSAKLCYSPTTRLSLGYGYVNFSSDTD 188
Query: 363 ATRALNEMNGKMIGRKPLYV 382
A RA ++N ++ K + +
Sbjct: 189 ANRATEDLNYTLVANKEIRI 208
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 34/183 (18%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSA-IVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
+YV +L + VT++ L +F + + SA + + S +G+VNF S A A E L
Sbjct: 137 LYVGDLDQKVTEKSLSSLFTKYESFLSAKLCYSPTTRLSLGYGYVNFSSDTDANRATEDL 196
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLK-----GANLYLKNLDD-SI 321
N Y A K RI Y K K N+++ NL+ +
Sbjct: 197 N---------YTLVANKEI-------------RIMPYVKGKDKSFMSTNVFVSNLNTREL 234
Query: 322 NDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLY 381
E F G I SCK+ V K GF +F + A + N +I ++
Sbjct: 235 TLRLFYERFRHVGKILSCKLDV-----RKRQGFISFESKDTAEDFVKNYNTALIDGCNIH 289
Query: 382 VAV 384
++
Sbjct: 290 CSI 292
>gi|412993650|emb|CCO14161.1| predicted protein [Bathycoccus prasinos]
Length = 499
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 177/407 (43%), Gaps = 56/407 (13%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
+LYV + ++++E QL LF + V S + RD + S GY +V Y +DA NAKE
Sbjct: 97 NLYVWSIPRDMDERQLSTLFQKFGTVESCTIMRDVQTKQSKGYGFVKYVKFEDAVNAKEK 156
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYG----------------NVFIKNLDTSIDNKAL 132
L+ + K ++I ++ D + +G NV++K L ID L
Sbjct: 157 LHGKFVKDKQLQIKFASTDSNGLMGVHGGMIGATGVDVASIPTDNVYVKGLPLDIDEGIL 216
Query: 133 CDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFV 192
+ F AFG ++SC+V + ++FE A+ A++ NG +I ++ + V
Sbjct: 217 REKFGAFGKIVSCRVIATT-------ALIRFETVGEAEVAVREANGKMIV-SEIGGAMPV 268
Query: 193 RRQERAQQNVS---PKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGK-SRC 248
A+Q + P +N+YV N+ + + LK +F G + S +M+D + S+
Sbjct: 269 SVSFNAKQQIMASLPTHSNLYVWNIPRDMEEGSLKHLFEECGEVESVNIMRDKMSQVSKG 328
Query: 249 FGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLK 308
+GFV F + A A+EK++G + + + K A ++ A
Sbjct: 329 YGFVKFIRYEEAEKAIEKVSGRVLREDLAHRPLQVKFANTDSSGVAGSSGRGGGEAGGGG 388
Query: 309 ------------GANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAA 356
N+Y+K L N+ L F++FG I SC + +G
Sbjct: 389 GGVGGSAMTNPPSENIYIKGLPTDSNENDLVNAFAQFGRIISCTRIAT-------TGIIG 441
Query: 357 FSMPEEATRALNEMNGKMI--GRKPLYVAVAQRKEERKARLQAQFAQ 401
F EEA+RA+ NG + G PL V K+++ FAQ
Sbjct: 442 FQSVEEASRAVQGANGTTLLGGSVPLMVTF-------KSQICRAFAQ 481
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 131/294 (44%), Gaps = 37/294 (12%)
Query: 111 RKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAID-SNGQSKGYGFVQFENEEAA 169
+K + N+++ ++ +D + L F FGTV SC + D QSKGYGFV++ E A
Sbjct: 91 KKPKHSNLYVWSIPRDMDERQLSTLFQKFGTVESCTIMRDVQTKQSKGYGFVKYVKFEDA 150
Query: 170 QNAIKMLNGMLINDKQVYVGLFVRRQERAQQNV-------------SPKFTNVYVNNLAE 216
NA + L+G + DKQ+ + F V S NVYV L
Sbjct: 151 VNAKEKLHGKFVKDKQLQIK-FASTDSNGLMGVHGGMIGATGVDVASIPTDNVYVKGLPL 209
Query: 217 TVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKV 276
+ + L++ FG FG I S V+ + + F++ A AV + NG V
Sbjct: 210 DIDEGILREKFGAFGKIVSCRVIATT-------ALIRFETVGEAEVAVREANGKM---IV 259
Query: 277 WYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTI 336
+G A + F ++ +NLY+ N+ + + LK LF E G +
Sbjct: 260 SEIGGAMP-------VSVSFNAKQQIMASLPTHSNLYVWNIPRDMEEGSLKHLFEECGEV 312
Query: 337 TSCKVMVDQHG-FSKGSGFAAFSMPEEATRALNEMNGKM----IGRKPLYVAVA 385
S +M D+ SKG GF F EEA +A+ +++G++ + +PL V A
Sbjct: 313 ESVNIMRDKMSQVSKGYGFVKFIRYEEAEKAIEKVSGRVLREDLAHRPLQVKFA 366
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 119/298 (39%), Gaps = 50/298 (16%)
Query: 5 GAAAATAAVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQS 64
G T A++P+ ++YV L +++E L + F ++VS RV +
Sbjct: 181 GVHGGMIGATGVDVASIPTD----NVYVKGLPLDIDEGILREKFGAFGKIVSCRVIATTA 236
Query: 65 --KRSSLGYAYVNYSNPQDAANAKEALNFMPI----NGKPIRIMYSHRDPSIRKSGYGNV 118
+ ++G A V E MP+ N K +IM S P+ + N+
Sbjct: 237 LIRFETVGEAEVAVREANGKMIVSEIGGAMPVSVSFNAKQ-QIMASL--PT-----HSNL 288
Query: 119 FIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQ-SKGYGFVQFENEEAAQNAIKMLN 177
++ N+ ++ +L F G V S + D Q SKGYGFV+F E A+ AI+ ++
Sbjct: 289 YVWNIPRDMEEGSLKHLFEECGEVESVNIMRDKMSQVSKGYGFVKFIRYEEAEKAIEKVS 348
Query: 178 GMLINDKQVYVGLFVR------------------------RQERAQQNVSPKFTNVYVNN 213
G ++ + + L V+ +P N+Y+
Sbjct: 349 GRVLREDLAHRPLQVKFANTDSSGVAGSSGRGGGEAGGGGGGVGGSAMTNPPSENIYIKG 408
Query: 214 LAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTT 271
L + DL F FG I S + + G + FQS + A+ AV+ NGTT
Sbjct: 409 LPTDSNENDLVNAFAQFGRIISCTRIATT-------GIIGFQSVEEASRAVQGANGTT 459
>gi|303275187|ref|XP_003056892.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461244|gb|EEH58537.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 302
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 111/180 (61%), Gaps = 3/180 (1%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ ++YVG+L+ E L+++F Q VV+V V +D+ + GY +V ++N +DA A
Sbjct: 7 DATIYVGNLDLACTEEILWEVFVQAGPVVNVYVPKDRVSNAHQGYGFVEFANEEDADYAI 66
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSC- 145
+ LN + ++GKP+R+ + +D G N+F+ NLD+ +D K L DTF+AFG V++
Sbjct: 67 KVLNMIKLHGKPVRVNKASQDKKSNDVG-ANLFVGNLDSELDEKLLYDTFSAFGVVITTP 125
Query: 146 KVAID-SNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
K+ D +G S+G+GFV +++ EAA AI+ +NG + ++ + V ++ R +++ +P
Sbjct: 126 KIMRDPDSGNSRGFGFVSYDSFEAADAAIEAMNGQFLCNRPISVTFAYKKDTRGERHGTP 185
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 95/189 (50%), Gaps = 20/189 (10%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEKL 267
+YV NL T+E L ++F G + + V KD + +GFV F + + A A++ L
Sbjct: 10 IYVGNLDLACTEEILWEVFVQAGPVVNVYVPKDRVSNAHQGYGFVEFANEEDADYAIKVL 69
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
N + K V +A + ++ D+ GANL++ NLD ++++ L
Sbjct: 70 NMIKLHGKPVRVNKASQD-KKSNDV----------------GANLFVGNLDSELDEKLLY 112
Query: 328 ELFSEFGT-ITSCKVMVD-QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
+ FS FG IT+ K+M D G S+G GF ++ E A A+ MNG+ + +P+ V A
Sbjct: 113 DTFSAFGVVITTPKIMRDPDSGNSRGFGFVSYDSFEAADAAIEAMNGQFLCNRPISVTFA 172
Query: 386 QRKEERKAR 394
+K+ R R
Sbjct: 173 YKKDTRGER 181
>gi|366988141|ref|XP_003673837.1| hypothetical protein NCAS_0A08980 [Naumovozyma castellii CBS 4309]
gi|342299700|emb|CCC67456.1| hypothetical protein NCAS_0A08980 [Naumovozyma castellii CBS 4309]
Length = 605
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 169/406 (41%), Gaps = 72/406 (17%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
SL++ L +V E+ LYD+FS+ +VS+++C D + SL Y Y+N+S+ +A A +
Sbjct: 93 SLFINGLADDVTENMLYDVFSKYQSLVSLKICCDSDSKKSLNYGYLNFSDELEAKKAVDD 152
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNL---DTSIDNKALCDTFAAFGTVLSC 145
N+ + G I++M S R+ RK+ NVF NL + + +A DTF +G +LSC
Sbjct: 153 FNYTILFGNEIKMMPSLRNTIYRKNIGTNVFFANLPLENKHLTTRAFYDTFKGYGEILSC 212
Query: 146 KVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK 205
K+ + K GFV F+N++ AQ I N + ++ GL ++ R N +
Sbjct: 213 KL-----DKRKNIGFVYFDNDKPAQMVINDFNNKIYFGNKIICGLHFDKEIRNFPNFDKR 267
Query: 206 FTN---------------------------------VYVNNLAETVTDEDLKKIFGHFGT 232
N ++V NL V DE++ F G
Sbjct: 268 KANIDNKIIIDDELEAANIGVQFKKNSELILPHPNAIFVKNLPFDVPDEEILDHFSKLGP 327
Query: 233 ITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADL 292
+ S + KS + F+ ++ A N T K V RA
Sbjct: 328 VKSVFSSNVTKYKSS-WAFITYKKQTDTIRATNHFNNTKFQGKTITVSRA---------- 376
Query: 293 RAKFEQERISRYEKLKGA----NLYLKNLDDSINDEKLKELFSEFGTITSCKVMV--DQH 346
KLK +YL N+ N E L+ L + G I + K+ + D H
Sbjct: 377 -------------KLKNTEGNRTVYLNNVSVVCNQEFLRRLCLQEG-IKAQKIYLKPDDH 422
Query: 347 GFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERK 392
SG+ + + A R +NGK IG ++V+ + K+ K
Sbjct: 423 DSYSCSGYIKCNSKDNAKRVFEILNGKFIGGCYIHVSWDKIKDPLK 468
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 25/189 (13%)
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDG-KSRCFGFVNFQSPDAAAAAVE 265
T++++N LA+ VT+ L +F + ++ S + DSD KS +G++NF A AV+
Sbjct: 92 TSLFINGLADDVTENMLYDVFSKYQSLVSLKICCDSDSKKSLNYGYLNFSDELEAKKAVD 151
Query: 266 KLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNL---DDSIN 322
N T G K R + Y K G N++ NL + +
Sbjct: 152 DFNYTI------LFGNEIKMM----------PSLRNTIYRKNIGTNVFFANLPLENKHLT 195
Query: 323 DEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
+ F +G I SCK +D+ K GF F + A +N+ N K+ +
Sbjct: 196 TRAFYDTFKGYGEILSCK--LDKR---KNIGFVYFDNDKPAQMVINDFNNKIYFGNKIIC 250
Query: 383 AVAQRKEER 391
+ KE R
Sbjct: 251 GLHFDKEIR 259
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 128/310 (41%), Gaps = 49/310 (15%)
Query: 111 RKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNG-QSKGYGFVQFENEEAA 169
RK ++FI L + L D F+ + +++S K+ DS+ +S YG++ F +E A
Sbjct: 87 RKRIVTSLFINGLADDVTENMLYDVFSKYQSLVSLKICCDSDSKKSLNYGYLNFSDELEA 146
Query: 170 QNAIKMLNGMLI--NDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNL---AETVTDEDLK 224
+ A+ N ++ N+ ++ L R ++N+ TNV+ NL + +T
Sbjct: 147 KKAVDDFNYTILFGNEIKMMPSL---RNTIYRKNIG---TNVFFANLPLENKHLTTRAFY 200
Query: 225 KIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQK 284
F +G I S + K + GFV F + A + N+K+++ +
Sbjct: 201 DTFKGYGEILSCKL-----DKRKNIGFVYFDNDKPAQMVINDF-----NNKIYFGNKIIC 250
Query: 285 RAEREADLRA--KFEQE------RISRYEKLKGAN------------------LYLKNLD 318
+ ++R F++ +I ++L+ AN +++KNL
Sbjct: 251 GLHFDKEIRNFPNFDKRKANIDNKIIIDDELEAANIGVQFKKNSELILPHPNAIFVKNLP 310
Query: 319 DSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK 378
+ DE++ + FS+ G + S + + F + + RA N N K
Sbjct: 311 FDVPDEEILDHFSKLGPVKSV-FSSNVTKYKSSWAFITYKKQTDTIRATNHFNNTKFQGK 369
Query: 379 PLYVAVAQRK 388
+ V+ A+ K
Sbjct: 370 TITVSRAKLK 379
>gi|66821129|ref|XP_644081.1| RNA recognition motif-containing protein RRM [Dictyostelium
discoideum AX4]
gi|60472201|gb|EAL70154.1| RNA recognition motif-containing protein RRM [Dictyostelium
discoideum AX4]
Length = 904
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 18/207 (8%)
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNV+V +L DEDL+ +F +G + S+ VM D G S +GFV F SP +AAA+E+
Sbjct: 109 TNVFVKHLPYEFNDEDLENLFSKYGKVLSSKVMIDPKGNSYGYGFVRFSSPQESAAAIEE 168
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
L+G Y + +K R ++L K NL++K L + D++L
Sbjct: 169 LDG--------YQYQNKKLLCRLSNLYTNLN-------SKYPSNNLFIKPLPYDVTDDQL 213
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRK---PLYVA 383
++LF FG I CKVM+D +G SK +GF FS +A++A++ MNG I + PL V
Sbjct: 214 RKLFEPFGKIIECKVMLDHNGQSKFAGFVRFSSELDASKAIDAMNGVRINKDSGYPLVVK 273
Query: 384 VAQRKEERKARLQAQFAQIRAPGGMSP 410
A ++++ +R Q + I ++P
Sbjct: 274 YADTEQQKISRKQRKMQTIYQEKIIAP 300
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 96/179 (53%), Gaps = 3/179 (1%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
+++V L N+ L +LFS+ +V+S +V D K +S GY +V +S+PQ++A A E
Sbjct: 109 TNVFVKHLPYEFNDEDLENLFSKYGKVLSSKVMID-PKGNSYGYGFVRFSSPQESAAAIE 167
Query: 88 ALNFMPINGKPIRIMYSHRDPSIR-KSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
L+ K + S+ ++ K N+FIK L + + L F FG ++ CK
Sbjct: 168 ELDGYQYQNKKLLCRLSNLYTNLNSKYPSNNLFIKPLPYDVTDDQLRKLFEPFGKIIECK 227
Query: 147 VAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPK 205
V +D NGQSK GFV+F +E A AI +NG+ IN Y L V+ + QQ +S K
Sbjct: 228 VMLDHNGQSKFAGFVRFSSELDASKAIDAMNGVRINKDSGY-PLVVKYADTEQQKISRK 285
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 310 ANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH-GFSKGSGFAAFSMPEEATRALN 368
NL++ +L ++D L +LFS+FG + S +V+ D+ G +KG GF F +EA +
Sbjct: 769 TNLFVFHLPPFVDDSYLFQLFSQFGKLQSVRVITDKDTGENKGYGFVKFYQTDEALKCQK 828
Query: 369 EMNGKMIGRKPLYVAVAQRKE 389
EMNG IG K L V + KE
Sbjct: 829 EMNGFRIGSKFLKVKLKNEKE 849
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSN-GQSKGYGFVQFENEEAAQNAIKM 175
N+F+ +L +D+ L F+ FG + S +V D + G++KGYGFV+F + A K
Sbjct: 770 NLFVFHLPPFVDDSYLFQLFSQFGKLQSVRVITDKDTGENKGYGFVKFYQTDEALKCQKE 829
Query: 176 LNGMLINDKQVYVGL 190
+NG I K + V L
Sbjct: 830 MNGFRIGSKFLKVKL 844
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFGFVNFQSPDAAAAAVE 265
TN++V +L V D L ++F FG + S V+ D D G+++ +GFV F D A +
Sbjct: 769 TNLFVFHLPPFVDDSYLFQLFSQFGKLQSVRVITDKDTGENKGYGFVKFYQTDEALKCQK 828
Query: 266 KLNG 269
++NG
Sbjct: 829 EMNG 832
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 26 GNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANA 85
+ +L+V L V++S L+ LFSQ ++ SVRV D+ + GY +V + +A
Sbjct: 767 NDTNLFVFHLPPFVDDSYLFQLFSQFGKLQSVRVITDKDTGENKGYGFVKFYQTDEALKC 826
Query: 86 KEALNFMPINGKPIRI 101
++ +N I K +++
Sbjct: 827 QKEMNGFRIGSKFLKV 842
>gi|159164023|pdb|2D9P|A Chain A, Solution Structure Of Rna Binding Domain 4 In
Polyadenylation Binding Protein 3
Length = 103
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 77/95 (81%), Gaps = 4/95 (4%)
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
+RI+RY+ + NLY+KNLDD I+DE+L++ FS FGTITS KVM+ + G SKG GF FS
Sbjct: 8 DRITRYQVV---NLYVKNLDDGIDDERLRKAFSPFGTITSAKVMM-EGGRSKGFGFVCFS 63
Query: 359 MPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKA 393
PEEAT+A+ EMNG+++ KPLYVA+AQRKEER++
Sbjct: 64 SPEEATKAVTEMNGRIVATKPLYVALAQRKEERQS 98
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
N+YV NL + + DE L+K F FGTITSA VM + G+S+ FGFV F SP+ A AV ++
Sbjct: 17 NLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEM 75
Query: 268 NGTTNNDKVWYVGRAQKRAEREA 290
NG K YV AQ++ ER++
Sbjct: 76 NGRIVATKPLYVALAQRKEERQS 98
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
N+++KNLD ID++ L F+ FGT+ S KV ++ G+SKG+GFV F + E A A+ +
Sbjct: 17 NLYVKNLDDGIDDERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEM 75
Query: 177 NGMLINDKQVYVGLFVRRQER 197
NG ++ K +YV L R++ER
Sbjct: 76 NGRIVATKPLYVALAQRKEER 96
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y V+LYV +L+ +++ +L FS + S +V + + S G+ +V +S+P++A
Sbjct: 13 YQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGR--SKGFGFVCFSSPEEATK 70
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKSG 114
A +N + KP+ + + R R+SG
Sbjct: 71 AVTEMNGRIVATKPLYVALAQRKEE-RQSG 99
>gi|294925596|ref|XP_002778960.1| spliceosome-associated protein, putative [Perkinsus marinus ATCC
50983]
gi|239887806|gb|EER10755.1| spliceosome-associated protein, putative [Perkinsus marinus ATCC
50983]
Length = 388
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 102/176 (57%), Gaps = 1/176 (0%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ ++YVG+L+ V+E L++LF Q + +V + RD+ S GY +V + NP DA A
Sbjct: 21 DATIYVGNLDTKVDEELLWELFIQCGPIQNVSLPRDRIIGSHQGYGFVEFKNPDDADYAV 80
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGT-VLSC 145
+ +N + KPIR S D +R N+FI NL +D K L DTF+AFG+ V+ C
Sbjct: 81 KIMNLTKLFSKPIRCNKSSSDRIVRDEVGANLFIGNLGPDVDEKQLYDTFSAFGSIVVFC 140
Query: 146 KVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQN 201
K+ G+SKG+GFV ++ EA+ A+ +NG + ++Q+ V ++ + +++
Sbjct: 141 KIMRSETGESKGFGFVSYDGFEASDAAMAGMNGQYLCNRQISVSYSYKKDSKGERH 196
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 98/189 (51%), Gaps = 20/189 (10%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFGFVNFQSPDAAAAAVEKL 267
+YV NL V +E L ++F G I + + +D G + +GFV F++PD A AV+ +
Sbjct: 24 IYVGNLDTKVDEELLWELFIQCGPIQNVSLPRDRIIGSHQGYGFVEFKNPDDADYAVKIM 83
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRA-KFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
N T K +R K +RI R E GANL++ NL +++++L
Sbjct: 84 NLTKLFSK---------------PIRCNKSSSDRIVRDEV--GANLFIGNLGPDVDEKQL 126
Query: 327 KELFSEFGTITS-CKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
+ FS FG+I CK+M + G SKG GF ++ E + A+ MNG+ + + + V+ +
Sbjct: 127 YDTFSAFGSIVVFCKIMRSETGESKGFGFVSYDGFEASDAAMAGMNGQYLCNRQISVSYS 186
Query: 386 QRKEERKAR 394
+K+ + R
Sbjct: 187 YKKDSKGER 195
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEE 362
+E+ A +Y+ NLD +++E L ELF + G I + + D+ G +G GF F P++
Sbjct: 16 WERNPDATIYVGNLDTKVDEELLWELFIQCGPIQNVSLPRDRIIGSHQGYGFVEFKNPDD 75
Query: 363 ATRALNEMNGKMIGRKPL 380
A A+ MN + KP+
Sbjct: 76 ADYAVKIMNLTKLFSKPI 93
>gi|145491019|ref|XP_001431509.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145522722|ref|XP_001447205.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398614|emb|CAK64111.1| unnamed protein product [Paramecium tetraurelia]
gi|124414705|emb|CAK79808.1| unnamed protein product [Paramecium tetraurelia]
Length = 260
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 107/176 (60%), Gaps = 2/176 (1%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
++Y+G+L+Q V + +++LF Q VV+V + +D+ GY +V + + +DA A +
Sbjct: 20 TIYIGNLDQKVTDDIVWELFIQCGPVVNVHIPKDKISGEHQGYGFVEFKSEEDADYAIKI 79
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
++ + + GKPI++ + +D ++ G N+FI NLDT ID K L +TF+AFG +LS K+
Sbjct: 80 MHMIKLYGKPIKVNKASQDKRTQEVG-ANLFIGNLDTEIDEKTLYETFSAFGHILSTKIM 138
Query: 149 ID-SNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS 203
+ G SKGYGFV ++N E++ A+ +NG + K + V ++ + +++ S
Sbjct: 139 RNPETGVSKGYGFVSYDNFESSDGALTAMNGQFLGTKIIRVEYAFKKDAKGERHGS 194
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 110/216 (50%), Gaps = 25/216 (11%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEKL 267
+Y+ NL + VTD+ + ++F G + + + KD G+ + +GFV F+S + A A++ +
Sbjct: 21 IYIGNLDQKVTDDIVWELFIQCGPVVNVHIPKDKISGEHQGYGFVEFKSEEDADYAIKIM 80
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
+ + G+ K + D R QE GANL++ NLD I+++ L
Sbjct: 81 H------MIKLYGKPIKVNKASQDKRT---QEV--------GANLFIGNLDTEIDEKTLY 123
Query: 328 ELFSEFGTITSCKVMVD-QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
E FS FG I S K+M + + G SKG GF ++ E + AL MNG+ +G K + V A
Sbjct: 124 ETFSAFGHILSTKIMRNPETGVSKGYGFVSYDNFESSDGALTAMNGQFLGTKIIRVEYAF 183
Query: 387 RKEERKARLQAQFAQIRAPGGMSPLAS----GIPGY 418
+K+ + R +Q ++ A PLA G GY
Sbjct: 184 KKDAKGERHGSQAERLLAAN--RPLAQKALLGFVGY 217
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEE 362
YE+ + A +Y+ NLD + D+ + ELF + G + + + D+ G +G GF F E+
Sbjct: 13 YERNQEATIYIGNLDQKVTDDIVWELFIQCGPVVNVHIPKDKISGEHQGYGFVEFKSEED 72
Query: 363 ATRALNEMNGKMIGRKPLYVAVA---QRKEERKARL 395
A A+ M+ + KP+ V A +R +E A L
Sbjct: 73 ADYAIKIMHMIKLYGKPIKVNKASQDKRTQEVGANL 108
>gi|157114083|ref|XP_001657973.1| nucleolysin tia-1 [Aedes aegypti]
gi|108877443|gb|EAT41668.1| AAEL006710-PA [Aedes aegypti]
Length = 453
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 133/269 (49%), Gaps = 34/269 (12%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
+LYVG+L+Q+V E L LF Q+ V S ++ R+ SS YA++ Y+N Q A A A
Sbjct: 9 TLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIRE---ASSDPYAFIEYANHQSAQTALAA 65
Query: 89 LNFMPINGKPIRIMYSH---RDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSC 145
+N K I++ ++ P S + ++F+ +L I+ + L + FA FG + +C
Sbjct: 66 MNKRLFLKKEIKVNWATSPGNQPKTDTSQHHHIFVGDLSPEIETETLREAFAPFGEISNC 125
Query: 146 KVAIDSNG-QSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNV-- 202
++ D +S+GY FV F + A+NAI+M+NG + + + R+ ++N+
Sbjct: 126 RIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKPPAPRENIKG 185
Query: 203 -----SPKFTNVYVNN------------LAETVTDEDLKKIFGHFGTITSAIVMKDSDGK 245
+P F +Y N A + D + K FG FG I V KD
Sbjct: 186 IKSGKTPGFEEIYNNTGPTNTTVYCGGFPANAINDMLIHKHFGLFGQIQDVRVFKD---- 241
Query: 246 SRCFGFVNFQSPDAAAAAVEKLNGTTNND 274
+ + F+ F + ++AA A+E GT N++
Sbjct: 242 -KGYAFIKFNNKESAARAIE---GTHNSE 266
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 89/183 (48%), Gaps = 20/183 (10%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLN 268
+YV NL ++VT++ L +FG G + S +++++ S + F+ + + +A A+ +N
Sbjct: 10 LYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREAS--SDPYAFIEYANHQSAQTALAAMN 67
Query: 269 GTTNNDKVWYVGRAQKRAEREADLRAKFEQE--RISRYEKLKGANLYLKNLDDSINDEKL 326
KR + +++ + + + + ++++ +L I E L
Sbjct: 68 ---------------KRLFLKKEIKVNWATSPGNQPKTDTSQHHHIFVGDLSPEIETETL 112
Query: 327 KELFSEFGTITSCKVMVDQHGF-SKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
+E F+ FG I++C+++ D S+G F +F EA A+ MNG+ +G + + +
Sbjct: 113 REAFAPFGEISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWS 172
Query: 386 QRK 388
RK
Sbjct: 173 TRK 175
>gi|145347251|ref|XP_001418087.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578315|gb|ABO96380.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 319
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 107/178 (60%), Gaps = 6/178 (3%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
++YVG+L+ V E L++LF Q V +V V +D+ + GY +V + N +DA +
Sbjct: 30 TVYVGNLDPQVTEEVLWELFLQAGPVTNVYVPKDRVTSTHQGYGFVEFRNEEDAEYGIKI 89
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYG-NVFIKNLDTSIDNKALCDTFAAFGTVLSC-K 146
LN + + GKPI++ S D R+ G N+FI NLD ID K L DTF+AFG V++ K
Sbjct: 90 LNMVKLFGKPIKVNKSVGD---RRDEVGANLFIGNLDPDIDEKLLYDTFSAFGVVINTPK 146
Query: 147 VAID-SNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS 203
+ D NG SKG+GFV +++ EA+ AI+ +NG + +KQ+ V ++ + +++ S
Sbjct: 147 IMRDPDNGASKGFGFVAYDSFEASDAAIEAMNGQFLCNKQINVQYAYKKDSKGERHGS 204
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 21/199 (10%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEKL 267
VYV NL VT+E L ++F G +T+ V KD + +GFV F++ + A ++ L
Sbjct: 31 VYVGNLDPQVTEEVLWELFLQAGPVTNVYVPKDRVTSTHQGYGFVEFRNEEDAEYGIKIL 90
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
N V G+ K + D R + GANL++ NLD I+++ L
Sbjct: 91 N------MVKLFGKPIKVNKSVGDRRDEV------------GANLFIGNLDPDIDEKLLY 132
Query: 328 ELFSEFGT-ITSCKVMVD-QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVA 385
+ FS FG I + K+M D +G SKG GF A+ E + A+ MNG+ + K + V A
Sbjct: 133 DTFSAFGVVINTPKIMRDPDNGASKGFGFVAYDSFEASDAAIEAMNGQFLCNKQINVQYA 192
Query: 386 QRKEERKARLQAQFAQIRA 404
+K+ + R +Q ++ A
Sbjct: 193 YKKDSKGERHGSQAERLLA 211
>gi|410730871|ref|XP_003980256.1| hypothetical protein NDAI_0G05970 [Naumovozyma dairenensis CBS 421]
gi|401780433|emb|CCK73580.1| hypothetical protein NDAI_0G05970 [Naumovozyma dairenensis CBS 421]
Length = 611
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 164/387 (42%), Gaps = 64/387 (16%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
LY+G L ++V E L++ F + S+++CRD SLGY Y+N+SN +A +
Sbjct: 103 LYIGGLSKDVTEETLFEAFEDYKTLASIKICRDSVTNESLGYGYLNFSNSVEATKLIDDY 162
Query: 90 NFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALC-----DTFAAFGTVLS 144
N+ + G I+IM S R+ RK+ NVF NL ++NK L DTF +G +LS
Sbjct: 163 NYTNLFGNEIKIMPSMRNTLYRKNIGTNVFFSNL--PLENKQLTTRKFYDTFKKYGEILS 220
Query: 145 CKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERA------ 198
CK +DS K GFV FEN++AA AIK N + ++ G+ ++ R
Sbjct: 221 CK--LDS---RKNIGFVYFENDKAALQAIKDYNNKVFFGNKIICGIHFDKEIRTFPDFDK 275
Query: 199 ---------------------------QQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFG 231
+ + P V++ NL T D+++ F G
Sbjct: 276 RKSYLDSQLIIEDELEAGGEFLKFKQEPKCIVPHPNAVFIKNLPMTTNDDEILDFFSKIG 335
Query: 232 TITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREAD 291
+ S + S + FV ++ A++KL+ T D+ V +A+ +
Sbjct: 336 PVKSVFASQVLKYNS-LWAFVTYKKSSDTELAIQKLDQTYFKDRAISVTKAKSKK----- 389
Query: 292 LRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVD--QHGFS 349
+ ++ +YLKNL I +E+ E I K+ VD
Sbjct: 390 ----------TNFKIHDKKTVYLKNL-SPICNERFIERICLQERIRVQKISVDPISPDIL 438
Query: 350 KGSGFAAFSMPEEATRALNEMNGKMIG 376
+GF +A + N M+ ++IG
Sbjct: 439 TNTGFVTCKTEVDANKLFNFMDKRLIG 465
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 39/219 (17%)
Query: 196 ERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNF 254
++ +N+ PK T +Y+ L++ VT+E L + F + T+ S + +DS +S +G++NF
Sbjct: 90 KKLAENIKPKTTPLYIGGLSKDVTEETLFEAFEDYKTLASIKICRDSVTNESLGYGYLNF 149
Query: 255 QSPDAAAAAVEKLNGTT---NNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGAN 311
+ A ++ N T N K+ R + Y K G N
Sbjct: 150 SNSVEATKLIDDYNYTNLFGNEIKI-------------------MPSMRNTLYRKNIGTN 190
Query: 312 LYLKNL---DDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALN 368
++ NL + + K + F ++G I SCK+ K GF F + A +A+
Sbjct: 191 VFFSNLPLENKQLTTRKFYDTFKKYGEILSCKL-----DSRKNIGFVYFENDKAALQAIK 245
Query: 369 EMNGKMIGRKPLYVAVAQRKE--------ERKARLQAQF 399
+ N K+ + + KE +RK+ L +Q
Sbjct: 246 DYNNKVFFGNKIICGIHFDKEIRTFPDFDKRKSYLDSQL 284
>gi|344244233|gb|EGW00337.1| Polyadenylate-binding protein 1 [Cricetulus griseus]
Length = 101
Score = 118 bits (296), Expect = 8e-24, Method: Composition-based stats.
Identities = 60/103 (58%), Positives = 76/103 (73%), Gaps = 4/103 (3%)
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+N + GKPI IM+S RD S+RKSG GNVFIKN+D S DNKAL D FAAFG +LSC+V
Sbjct: 1 MNTDVVKGKPIPIMWSQRDSSLRKSGVGNVFIKNVDKSSDNKALYDPFAAFGNILSCQVV 60
Query: 149 IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLF 191
D NG SKGYGFV + +EA AI+ ++GML+N+ +V+V F
Sbjct: 61 FDENG-SKGYGFVHLKTQEA---AIEKMDGMLLNECKVFVCRF 99
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 299 ERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFS 358
+R S K N+++KN+D S +++ L + F+ FG I SC+V+ D++G SKG GF
Sbjct: 17 QRDSSLRKSGVGNVFIKNVDKSSDNKALYDPFAAFGNILSCQVVFDENG-SKGYGFVHLK 75
Query: 359 MPEEATRALNEMNGKMIGRKPLYV 382
E A+ +M+G ++ ++V
Sbjct: 76 TQEA---AIEKMDGMLLNECKVFV 96
>gi|326495566|dbj|BAJ85879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 146/276 (52%), Gaps = 21/276 (7%)
Query: 12 AVTSATTAAVPSGYGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGY 71
A+ S AA P N +++VGDL ++E+ L+ F +VV+++V R++ S GY
Sbjct: 137 AMGSPAPAAQPGQEENKTIWVGDLHYWMDENYLHTCFGYTGEVVAIKVIRNKQTGQSEGY 196
Query: 72 AYVNYSNPQDAANAKEAL--NFMPINGKPIRIMYSHRDPSIRKSGYG---NVFIKNLDTS 126
+V + + A + + MP +P RI ++ R+S ++F+ +L +
Sbjct: 197 GFVEFYSHAAAEKVLDGFAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASD 256
Query: 127 IDNKALCDTFAA-FGTVLSCKVAIDSN-GQSKGYGFVQFENEEAAQNAIKMLNGMLINDK 184
+++ AL +TF++ + +V KV ID+N G+SKGYGFV+F ++ NA+ +NG+ + +
Sbjct: 257 VNDTALLETFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKTNAMTEMNGVYCSTR 316
Query: 185 QVYVGLFVRRQ---------ERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITS 235
+ +G R+ A+ + T V+V L V+++DLK+ F +G I+S
Sbjct: 317 PMRIGPATPRKSSGTSGSTGSSARSDGDLTNTTVFVGGLDPNVSEDDLKQTFSQYGEISS 376
Query: 236 AIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTT 271
+K GK +C GFV F A A++ LNG+T
Sbjct: 377 ---VKIPVGK-QC-GFVQFLQRKNAEDALQGLNGST 407
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 133/287 (46%), Gaps = 24/287 (8%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKML 176
+++ +L +D L F G V++ KV + GQS+GYGFV+F + AA+ +
Sbjct: 155 IWVGDLHYWMDENYLHTCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLDGF 214
Query: 177 NGMLI-NDKQVY------VGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFG- 228
G ++ N Q + + RR + A + +++V +LA V D L + F
Sbjct: 215 AGHIMPNTDQPFRINWASFSMGDRRSDIASDH------SIFVGDLASDVNDTALLETFSS 268
Query: 229 HFGTITSAIVMKDSD-GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAE 287
+ ++ A V+ D++ G+S+ +GFV F A+ ++NG + + +G A R
Sbjct: 269 RYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKTNAMTEMNGVYCSTRPMRIGPATPRKS 328
Query: 288 READLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHG 347
L +++ LD +++++ LK+ FS++G I+S K+ V
Sbjct: 329 SGTSGSTGSSARSDG---DLTNTTVFVGGLDPNVSEDDLKQTFSQYGEISSVKIPV---- 381
Query: 348 FSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQRKEERKAR 394
K GF F + A AL +NG IG++ + ++ + ++ R
Sbjct: 382 -GKQCGFVQFLQRKNAEDALQGLNGSTIGKQTVRLSWGRNPANKQLR 427
>gi|356532261|ref|XP_003534692.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 365
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 110/180 (61%), Gaps = 3/180 (1%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ + YVG+L+ ++E L++LF Q VV+V V +D+ GY +V + + +DA A
Sbjct: 24 DATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADYAI 83
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS-C 145
+ LN + + GKPIR+ + +D G N+FI NLD +D K L DTF+AFG +++
Sbjct: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 146 KVAIDSN-GQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
K+ D + G S+G+GF+ +++ EA+ +AI+ +NG + ++Q+ V ++ + +++ +P
Sbjct: 143 KIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTP 202
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 105/210 (50%), Gaps = 23/210 (10%)
Query: 188 VGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKS 246
VG + Q A++N + YV NL +++E L ++F G + + V KD +
Sbjct: 9 VGANLLGQHAAERN---QDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQH 65
Query: 247 RCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK 306
+ +GFV F+S + A A++ LN K V +A + ++ D+
Sbjct: 66 QGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD-KKSLDV-------------- 110
Query: 307 LKGANLYLKNLDDSINDEKLKELFSEFGTI-TSCKVMVDQH-GFSKGSGFAAFSMPEEAT 364
GANL++ NLD ++++ L + FS FG I T+ K+M D G S+G GF ++ E +
Sbjct: 111 --GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASD 168
Query: 365 RALNEMNGKMIGRKPLYVAVAQRKEERKAR 394
A+ MNG+ + + + V+ A +K+ + R
Sbjct: 169 SAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
>gi|221486340|gb|EEE24601.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 576
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 104/178 (58%), Gaps = 2/178 (1%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ +LY+G+L+ V++ L++LF Q V +V V RD+ + GY +V + N DA A
Sbjct: 28 DATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYAL 87
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
+ +N + + GK +R+ S +D G NVF+ NLD +D K + DTF+AFG ++S K
Sbjct: 88 KLMNMVKLYGKALRLNKSAQDRRNFDVG-ANVFLGNLDPDVDEKTIYDTFSAFGNIISAK 146
Query: 147 VAIDS-NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS 203
+ D G S+G+GFV F+ EA+ A+ +NG I ++ ++V ++ R +++ S
Sbjct: 147 IMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKKDTRGERHGS 204
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 94/173 (54%), Gaps = 7/173 (4%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKML 176
++I NLD+ +D+ L + F G V + V D G +GYGFV+F NE A A+K++
Sbjct: 31 LYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYALKLM 90
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSA 236
N + + K + L Q+R +V NV++ NL V ++ + F FG I SA
Sbjct: 91 NMVKLYGKALR--LNKSAQDRRNFDVG---ANVFLGNLDPDVDEKTIYDTFSAFGNIISA 145
Query: 237 IVMKDSD-GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAER 288
+M+D + G SR FGFV+F + +A+ AA+ +NG ++ +V A K+ R
Sbjct: 146 KIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKKDTR 198
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 19/188 (10%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEKL 267
+Y+ NL V D+ L ++F G + + V +D G + +GFV F++ A A++ +
Sbjct: 31 LYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYALKLM 90
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
N V G+A R + A R F+ GAN++L NLD ++++ +
Sbjct: 91 N------MVKLYGKAL-RLNKSAQDRRNFD----------VGANVFLGNLDPDVDEKTIY 133
Query: 328 ELFSEFGTITSCKVMVD-QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
+ FS FG I S K+M D + G S+G GF +F E + AL MNG+ I +P++V+ A
Sbjct: 134 DTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAY 193
Query: 387 RKEERKAR 394
+K+ R R
Sbjct: 194 KKDTRGER 201
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEE 362
YE+ + A LY+ NLD ++D+ L ELF + G + + V D+ G +G GF F +
Sbjct: 23 YERNQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVD 82
Query: 363 ATRALNEMN 371
A AL MN
Sbjct: 83 ADYALKLMN 91
>gi|221508124|gb|EEE33711.1| splicing factor, putative [Toxoplasma gondii VEG]
Length = 576
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 104/178 (58%), Gaps = 2/178 (1%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ +LY+G+L+ V++ L++LF Q V +V V RD+ + GY +V + N DA A
Sbjct: 28 DATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYAL 87
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
+ +N + + GK +R+ S +D G NVF+ NLD +D K + DTF+AFG ++S K
Sbjct: 88 KLMNMVKLYGKALRLNKSAQDRRNFDVG-ANVFLGNLDPDVDEKTIYDTFSAFGNIISAK 146
Query: 147 VAIDS-NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS 203
+ D G S+G+GFV F+ EA+ A+ +NG I ++ ++V ++ R +++ S
Sbjct: 147 IMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKKDTRGERHGS 204
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 94/173 (54%), Gaps = 7/173 (4%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKML 176
++I NLD+ +D+ L + F G V + V D G +GYGFV+F NE A A+K++
Sbjct: 31 LYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYALKLM 90
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSA 236
N + + K + L Q+R +V NV++ NL V ++ + F FG I SA
Sbjct: 91 NMVKLYGKALR--LNKSAQDRRNFDVG---ANVFLGNLDPDVDEKTIYDTFSAFGNIISA 145
Query: 237 IVMKDSD-GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAER 288
+M+D + G SR FGFV+F + +A+ AA+ +NG ++ +V A K+ R
Sbjct: 146 KIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKKDTR 198
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 19/188 (10%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEKL 267
+Y+ NL V D+ L ++F G + + V +D G + +GFV F++ A A++ +
Sbjct: 31 LYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYALKLM 90
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
N V G+A R + A R F+ GAN++L NLD ++++ +
Sbjct: 91 N------MVKLYGKAL-RLNKSAQDRRNFD----------VGANVFLGNLDPDVDEKTIY 133
Query: 328 ELFSEFGTITSCKVMVD-QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
+ FS FG I S K+M D + G S+G GF +F E + AL MNG+ I +P++V+ A
Sbjct: 134 DTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAY 193
Query: 387 RKEERKAR 394
+K+ R R
Sbjct: 194 KKDTRGER 201
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEE 362
YE+ + A LY+ NLD ++D+ L ELF + G + + V D+ G +G GF F +
Sbjct: 23 YERNQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVD 82
Query: 363 ATRALNEMN 371
A AL MN
Sbjct: 83 ADYALKLMN 91
>gi|237833669|ref|XP_002366132.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211963796|gb|EEA98991.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 576
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 104/178 (58%), Gaps = 2/178 (1%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ +LY+G+L+ V++ L++LF Q V +V V RD+ + GY +V + N DA A
Sbjct: 28 DATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYAL 87
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCK 146
+ +N + + GK +R+ S +D G NVF+ NLD +D K + DTF+AFG ++S K
Sbjct: 88 KLMNMVKLYGKALRLNKSAQDRRNFDVGA-NVFLGNLDPDVDEKTIYDTFSAFGNIISAK 146
Query: 147 VAIDS-NGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVS 203
+ D G S+G+GFV F+ EA+ A+ +NG I ++ ++V ++ R +++ S
Sbjct: 147 IMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKKDTRGERHGS 204
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 94/173 (54%), Gaps = 7/173 (4%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDS-NGQSKGYGFVQFENEEAAQNAIKML 176
++I NLD+ +D+ L + F G V + V D G +GYGFV+F NE A A+K++
Sbjct: 31 LYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYALKLM 90
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSA 236
N + + K + L Q+R +V NV++ NL V ++ + F FG I SA
Sbjct: 91 NMVKLYGKALR--LNKSAQDRRNFDVG---ANVFLGNLDPDVDEKTIYDTFSAFGNIISA 145
Query: 237 IVMKDSD-GKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAER 288
+M+D + G SR FGFV+F + +A+ AA+ +NG ++ +V A K+ R
Sbjct: 146 KIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKKDTR 198
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 19/188 (10%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKSRCFGFVNFQSPDAAAAAVEKL 267
+Y+ NL V D+ L ++F G + + V +D G + +GFV F++ A A++ +
Sbjct: 31 LYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYALKLM 90
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
N V G+A R + A R F+ GAN++L NLD ++++ +
Sbjct: 91 N------MVKLYGKAL-RLNKSAQDRRNFD----------VGANVFLGNLDPDVDEKTIY 133
Query: 328 ELFSEFGTITSCKVMVD-QHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYVAVAQ 386
+ FS FG I S K+M D + G S+G GF +F E + AL MNG+ I +P++V+ A
Sbjct: 134 DTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAY 193
Query: 387 RKEERKAR 394
+K+ R R
Sbjct: 194 KKDTRGER 201
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 304 YEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQ-HGFSKGSGFAAFSMPEE 362
YE+ + A LY+ NLD ++D+ L ELF + G + + V D+ G +G GF F +
Sbjct: 23 YERNQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVD 82
Query: 363 ATRALNEMN 371
A AL MN
Sbjct: 83 ADYALKLMN 91
>gi|403339745|gb|EJY69134.1| Polyadenylate-binding protein, cytoplasmic and nuclear [Oxytricha
trifallax]
Length = 593
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 170/355 (47%), Gaps = 53/355 (14%)
Query: 89 LNFMPINGKPIRIM---------YSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFA-A 138
+ + INGKP R + + + K+ + + +KNLD SI ++ L + FA
Sbjct: 70 MKYFEINGKPCRALPNLFQLKKVIGTLENEMEKTNF--LLVKNLDKSITSQQLDEIFAKV 127
Query: 139 FG--TVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQE 196
FG VLS KV+I+S+ S+GYGFVQF + A+ A+ + + ++ + R+E
Sbjct: 128 FGDDAVLSAKVSINSDYSSRGYGFVQFACPQLAEQALAKASEF---NFEISTHQPMNREE 184
Query: 197 RAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVM----KDSDGKSRCFGFV 252
+ F N+Y+ N E +++IFG +GTI S +VM + +D ++ F FV
Sbjct: 185 -----LRKTFNNIYIKNFPSNWNKEKIEEIFGQYGTIKSTVVMMGKVQGTDQEAP-FAFV 238
Query: 253 NFQSPD-------AAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYE 305
++ PD A A+ T NDK + + Q + LR EQE+
Sbjct: 239 CYEDPDNKEYGPKCAQNAI-----TQENDKEYDGFKLQVKEALPKSLR---EQEKQREQN 290
Query: 306 KLKGA----NLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPE 361
+LK + NLY+KN ++ N+E+LK F ++G I K ++ + G + F + PE
Sbjct: 291 RLKNSKKRCNLYVKNFPENTNEEQLKAYFEKYGEIERIK-LIHKEG-AAVYAFVCYKNPE 348
Query: 362 EATRALNEMNGKMIGRKPLYVAVAQRKEERK-----ARLQAQFAQIRAPGGMSPL 411
AT A + + + K L++ ++KE RK AR + F +R S L
Sbjct: 349 SATYAKQQSQTQTLNGKQLFLNFYEQKEVRKIQQEDARDRTDFQNLRKQSPTSAL 403
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
+LYV + +N NE QL F + ++ +++ K + YA+V Y NP+ A AK+
Sbjct: 299 CNLYVKNFPENTNEEQLKAYFEKYGEIERIKLIH---KEGAAVYAFVCYKNPESATYAKQ 355
Query: 88 ALNFMPINGKPIRIMYSHRDPSIRK 112
+NGK + + + + +RK
Sbjct: 356 QSQTQTLNGKQLFLNF-YEQKEVRK 379
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 85/193 (44%), Gaps = 23/193 (11%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVS--VRVCRDQSKRSSLGYAYVNYSNPQD----- 81
++Y+ + N N+ ++ ++F Q + S V + + Q +A+V Y +P +
Sbjct: 191 NIYIKNFPSNWNKEKIEEIFGQYGTIKSTVVMMGKVQGTDQEAPFAFVCYEDPDNKEYGP 250
Query: 82 --AANAKEALNFMPING----------KPIRIMYSHRDPSIRKSGYG--NVFIKNLDTSI 127
A NA N +G K +R R+ + K+ N+++KN +
Sbjct: 251 KCAQNAITQENDKEYDGFKLQVKEALPKSLREQEKQREQNRLKNSKKRCNLYVKNFPENT 310
Query: 128 DNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVY 187
+ + L F +G + K+ I G + Y FV ++N E+A A + +N KQ++
Sbjct: 311 NEEQLKAYFEKYGEIERIKL-IHKEG-AAVYAFVCYKNPESATYAKQQSQTQTLNGKQLF 368
Query: 188 VGLFVRRQERAQQ 200
+ + +++ R Q
Sbjct: 369 LNFYEQKEVRKIQ 381
>gi|440297981|gb|ELP90622.1| nucleolysin TIA-1, putative [Entamoeba invadens IP1]
Length = 305
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 131/252 (51%), Gaps = 15/252 (5%)
Query: 29 SLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEA 88
S++V L ++V+E+ L +FS V VVS ++ +D++ + Y ++ + + A AKE
Sbjct: 40 SVHVAGLHESVDETLLSRIFSIVGHVVSCKIMKDKTGTHAR-YGFIEFIDHTTAEFAKEN 98
Query: 89 LNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVA 148
+N + GK +++ ++H S K + +F+ L T + N+ L FA FG V +V
Sbjct: 99 MNGRLVYGKELKVNWTHDSQSDAKGSF-KLFVGGLHTEVTNEILYQNFAKFGRVSDARVL 157
Query: 149 -IDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQ----------ER 197
+G+S+GYGFV F +E A+ A++M+NG I + V V Q +
Sbjct: 158 RYSQSGKSQGYGFVTFIRKEDAETAMQMMNGEKIQGRTVKVNWGTATQKPTETVKRGFDE 217
Query: 198 AQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSP 257
+ S NVYV + + + ++K+FG FG I +M+ +D + + +GFV F S
Sbjct: 218 ISRETSNTNNNVYVGGIPKETEESTMRKLFGDFGEIIDLKIMR-TDAE-KAYGFVRFVSH 275
Query: 258 DAAAAAVEKLNG 269
D A A+ LNG
Sbjct: 276 DNATKAIMMLNG 287
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 10/257 (3%)
Query: 117 NVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKML 176
+V + L S+D L F+ G V+SCK+ D G YGF++F + A+ A + +
Sbjct: 40 SVHVAGLHESVDETLLSRIFSIVGHVVSCKIMKDKTGTHARYGFIEFIDHTTAEFAKENM 99
Query: 177 NGMLINDKQVYVGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSA 236
NG L+ K+ L V +Q + F ++V L VT+E L + F FG ++ A
Sbjct: 100 NGRLVYGKE----LKVNWTHDSQSDAKGSF-KLFVGGLHTEVTNEILYQNFAKFGRVSDA 154
Query: 237 IVMKDS-DGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAK 295
V++ S GKS+ +GFV F + A A++ +NG + V + ++
Sbjct: 155 RVLRYSQSGKSQGYGFVTFIRKEDAETAMQMMNGEKIQGRTVKVNWGTATQKPTETVKRG 214
Query: 296 FEQERISRYEKLKGANLYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQHGFSKGSGFA 355
F++ ISR N+Y+ + + +++LF +FG I K+M + K GF
Sbjct: 215 FDE--ISRETSNTNNNVYVGGIPKETEESTMRKLFGDFGEIIDLKIM--RTDAEKAYGFV 270
Query: 356 AFSMPEEATRALNEMNG 372
F + AT+A+ +NG
Sbjct: 271 RFVSHDNATKAIMMLNG 287
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 16/171 (9%)
Query: 26 GNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANA 85
G+ L+VG L V LY F++ +V RV R S GY +V + +DA A
Sbjct: 123 GSFKLFVGGLHTEVTNEILYQNFAKFGRVSDARVLRYSQSGKSQGYGFVTFIRKEDAETA 182
Query: 86 KEALNFMPINGKPIRIMY---SHRDPSIRKSGY-----------GNVFIKNLDTSIDNKA 131
+ +N I G+ +++ + + + K G+ NV++ + +
Sbjct: 183 MQMMNGEKIQGRTVKVNWGTATQKPTETVKRGFDEISRETSNTNNNVYVGGIPKETEEST 242
Query: 132 LCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLIN 182
+ F FG ++ K+ K YGFV+F + + A AI MLNG +N
Sbjct: 243 MRKLFGDFGEIIDLKIM--RTDAEKAYGFVRFVSHDNATKAIMMLNGYQLN 291
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 18/169 (10%)
Query: 208 NVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKL 267
+V+V L E+V + L +IF G + S +MKD G +GF+ F A A E +
Sbjct: 40 SVHVAGLHESVDETLLSRIFSIVGHVVSCKIMKDKTGTHARYGFIEFIDHTTAEFAKENM 99
Query: 268 NGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKLK 327
NG K V + ++D + F+ L++ L + +E L
Sbjct: 100 NGRLVYGKELKVNWTH---DSQSDAKGSFK--------------LFVGGLHTEVTNEILY 142
Query: 328 ELFSEFGTITSCKVM-VDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI 375
+ F++FG ++ +V+ Q G S+G GF F E+A A+ MNG+ I
Sbjct: 143 QNFAKFGRVSDARVLRYSQSGKSQGYGFVTFIRKEDAETAMQMMNGEKI 191
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 294 AKFEQERISRYEKL------------KGANLYLKNLDDSINDEKLKELFSEFGTITSCKV 341
+ F+Q R R+E ++++ L +S+++ L +FS G + SCK+
Sbjct: 11 SSFQQPRYDRFESQPLASEVQQVPFENSKSVHVAGLHESVDETLLSRIFSIVGHVVSCKI 70
Query: 342 MVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMIGRKPLYV 382
M D+ G GF F A A MNG+++ K L V
Sbjct: 71 MKDKTGTHARYGFIEFIDHTTAEFAKENMNGRLVYGKELKV 111
>gi|357460829|ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355489744|gb|AES70947.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 379
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 110/180 (61%), Gaps = 3/180 (1%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ + YVG+L+ ++E L++LF Q VV+V V +D+ GY +V + + +DA A
Sbjct: 24 DATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADYAI 83
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS-C 145
+ LN + + GKPIR+ + +D G N+FI NLD +D K L DTF+AFG +++
Sbjct: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 146 KVAIDSN-GQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
K+ D + G S+G+GF+ +++ EA+ +AI+ +NG + ++Q+ V ++ + +++ +P
Sbjct: 143 KIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTP 202
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 105/210 (50%), Gaps = 23/210 (10%)
Query: 188 VGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDS-DGKS 246
VG + Q A++N + YV NL +++E L ++F G + + V KD +
Sbjct: 9 VGANLLGQHSAERN---QDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQH 65
Query: 247 RCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK 306
+ +GFV F+S + A A++ LN K V +A + ++ D+
Sbjct: 66 QGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD-KKSLDV-------------- 110
Query: 307 LKGANLYLKNLDDSINDEKLKELFSEFGTI-TSCKVMVD-QHGFSKGSGFAAFSMPEEAT 364
GANL++ NLD ++++ L + FS FG I T+ K+M D G S+G GF ++ E +
Sbjct: 111 --GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASD 168
Query: 365 RALNEMNGKMIGRKPLYVAVAQRKEERKAR 394
A+ MNG+ + + + V+ A +K+ + R
Sbjct: 169 SAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
>gi|338762832|gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora]
Length = 368
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 109/180 (60%), Gaps = 3/180 (1%)
Query: 27 NVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAK 86
+ + YVG+L+ V+E L++LF Q VV+V V +D+ S GY +V + + +DA A
Sbjct: 24 DATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNSHQGYGFVEFRSEEDADYAI 83
Query: 87 EALNFMPINGKPIRIMYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLS-C 145
+ LN + + GKPIR+ + +D G N+FI NLD +D K L DTF+AFG +++
Sbjct: 84 KVLNMIKLYGKPIRVNKASQDKKSVDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 146 KVAID-SNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSP 204
K+ D G S+G+GF+ +++ EA+ AI+ +NG + ++Q+ V ++ + +++ +P
Sbjct: 143 KIMRDPETGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTP 202
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 23/210 (10%)
Query: 188 VGLFVRRQERAQQNVSPKFTNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKS- 246
VG + Q A++N + YV NL V++E L ++F G + + V KD S
Sbjct: 9 VGANLLGQHSAERN---QDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNSH 65
Query: 247 RCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEK 306
+ +GFV F+S + A A++ LN K V +A + ++ D+
Sbjct: 66 QGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD-KKSVDV-------------- 110
Query: 307 LKGANLYLKNLDDSINDEKLKELFSEFGTI-TSCKVMVD-QHGFSKGSGFAAFSMPEEAT 364
GANL++ NLD ++++ L + FS FG I T+ K+M D + G S+G GF ++ E +
Sbjct: 111 --GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASD 168
Query: 365 RALNEMNGKMIGRKPLYVAVAQRKEERKAR 394
A+ MNG+ + + + V+ A +K+ + R
Sbjct: 169 AAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
>gi|281206149|gb|EFA80338.1| RNA recognition motif-containing protein RRM [Polysphondylium
pallidum PN500]
Length = 640
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 118/239 (49%), Gaps = 26/239 (10%)
Query: 207 TNVYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEK 266
TNV+V L D +L +F FG + SA VM D+ G S +GFV F SP + A++
Sbjct: 69 TNVFVKYLPNEYGDYELFTLFSPFGKVMSAKVMVDAKGNSYGYGFVRFSSPSESKKAIDN 128
Query: 267 LNGTTNNDKVWYVGRAQKRAEREADLRAKFEQERISRYEKLKGANLYLKNLDDSINDEKL 326
++G + +K R ++L + K NL+LK L +++D++L
Sbjct: 129 MDG--------FQLMHKKLLCRLSNLYSNCN-------NKYPSNNLFLKPLPATLSDDQL 173
Query: 327 KELFSEFGTITSCKVMVDQHGFSKGSGFAAFSMPEEATRALNEMNGKMI--GRKPLYVAV 384
KELFS FG I CKVM+DQ+G SK +GF F +AT+A+ MNG + PL V
Sbjct: 174 KELFSPFGEILECKVMIDQNGNSKLAGFVRFCNEADATKAMQAMNGTKMKDSPAPLVVKY 233
Query: 385 AQRKEERKARLQAQFAQIRAPGGMSP--------LASGIPGYH-HGAPRLGPQQLYYGQ 434
A + ++ R Q +++ P ++P L +P Y+ P P +Y GQ
Sbjct: 234 ADNEHQKSLRKQRKYSHFINPHPVNPYYNYVDHYLYFQVPQYYSFQDPNAPPIPIYPGQ 292
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 10/213 (4%)
Query: 108 PSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSNGQSKGYGFVQFENEE 167
P + + NVF+K L + L F+ FG V+S KV +D+ G S GYGFV+F +
Sbjct: 61 PDLLEKDQTNVFVKYLPNEYGDYELFTLFSPFGKVMSAKVMVDAKGNSYGYGFVRFSSPS 120
Query: 168 AAQNAIKMLNGMLINDKQVYVGLFVRRQERAQQNVSPKF--TNVYVNNLAETVTDEDLKK 225
++ AI ++G + K++ + R N + K+ N+++ L T++D+ LK+
Sbjct: 121 ESKKAIDNMDGFQLMHKKL-----LCRLSNLYSNCNNKYPSNNLFLKPLPATLSDDQLKE 175
Query: 226 IFGHFGTITSAIVMKDSDGKSRCFGFVNFQSPDAAAAAVEKLNGTTNNDKVWYVGRAQKR 285
+F FG I VM D +G S+ GFV F + A A++ +NGT D +
Sbjct: 176 LFSPFGEILECKVMIDQNGNSKLAGFVRFCNEADATKAMQAMNGTKMKDSPAPLVVKYAD 235
Query: 286 AEREADLRAKFEQERISRYEKLKGANLYLKNLD 318
E + LR +Q + S + N Y +D
Sbjct: 236 NEHQKSLR---KQRKYSHFINPHPVNPYYNYVD 265
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 17/198 (8%)
Query: 28 VSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKE 87
+++V L + +L+ LFS +V+S +V D +K +S GY +V +S+P ++ A +
Sbjct: 69 TNVFVKYLPNEYGDYELFTLFSPFGKVMSAKVMVD-AKGNSYGYGFVRFSSPSESKKAID 127
Query: 88 ALNFMPINGKPIRI----MYSHRDPSIRKSGYGNVFIKNLDTSIDNKALCDTFAAFGTVL 143
++ + K + +YS+ + K N+F+K L ++ + L + F+ FG +L
Sbjct: 128 NMDGFQLMHKKLLCRLSNLYSNCN---NKYPSNNLFLKPLPATLSDDQLKELFSPFGEIL 184
Query: 144 SCKVAIDSNGQSKGYGFVQFENEEAAQNAIKMLNGMLINDKQVYVGL---------FVRR 194
CKV ID NG SK GFV+F NE A A++ +NG + D + + +R+
Sbjct: 185 ECKVMIDQNGNSKLAGFVRFCNEADATKAMQAMNGTKMKDSPAPLVVKYADNEHQKSLRK 244
Query: 195 QERAQQNVSPKFTNVYVN 212
Q + ++P N Y N
Sbjct: 245 QRKYSHFINPHPVNPYYN 262
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 312 LYLKNLDDSINDEKLKELFSEFGTITSCKVMVDQH-GFSKGSGFAAFSMPEEATRALNEM 370
L++ +L ++D L +LFS FG + S +V+ D+ G +KG GF F ++A +LNEM
Sbjct: 508 LFVFHLPGFVDDSYLYKLFSRFGPLQSVRVITDKDTGENKGYGFVKFQNKDDAITSLNEM 567
Query: 371 NGKMIGRKPLYVAVAQR 387
NG +G+K L V + +
Sbjct: 568 NGLQVGQKYLKVKLKDK 584
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 118 VFIKNLDTSIDNKALCDTFAAFGTVLSCKVAIDSN-GQSKGYGFVQFENEEAAQNAIKML 176
+F+ +L +D+ L F+ FG + S +V D + G++KGYGFV+F+N++ A ++ +
Sbjct: 508 LFVFHLPGFVDDSYLYKLFSRFGPLQSVRVITDKDTGENKGYGFVKFQNKDDAITSLNEM 567
Query: 177 NGMLINDKQVYVGL 190
NG+ + K + V L
Sbjct: 568 NGLQVGQKYLKVKL 581
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 209 VYVNNLAETVTDEDLKKIFGHFGTITSAIVMKDSD-GKSRCFGFVNFQSPDAAAAAVEKL 267
++V +L V D L K+F FG + S V+ D D G+++ +GFV FQ+ D A ++ ++
Sbjct: 508 LFVFHLPGFVDDSYLYKLFSRFGPLQSVRVITDKDTGENKGYGFVKFQNKDDAITSLNEM 567
Query: 268 NG 269
NG
Sbjct: 568 NG 569
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 30 LYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAANAKEAL 89
L+V L V++S LY LFS+ + SVRV D+ + GY +V + N DA + +
Sbjct: 508 LFVFHLPGFVDDSYLYKLFSRFGPLQSVRVITDKDTGENKGYGFVKFQNKDDAITSLNEM 567
Query: 90 NFMPINGKPIRI 101
N + + K +++
Sbjct: 568 NGLQVGQKYLKV 579
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 25 YGNVSLYVGDLEQNVNESQLYDLFSQVAQVVSVRVCRDQSKRSSLGYAYVNYSNPQDAAN 84
Y + +L++ L +++ QL +LFS +++ +V DQ+ S L +V + N DA
Sbjct: 154 YPSNNLFLKPLPATLSDDQLKELFSPFGEILECKVMIDQNGNSKLA-GFVRFCNEADATK 212
Query: 85 AKEALNFMPINGKPIRIMYSHRDPSIRKS 113
A +A+N + P ++ + D +KS
Sbjct: 213 AMQAMNGTKMKDSPAPLVVKYADNEHQKS 241
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.131 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,928,797,227
Number of Sequences: 23463169
Number of extensions: 444142273
Number of successful extensions: 1662627
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13196
Number of HSP's successfully gapped in prelim test: 12888
Number of HSP's that attempted gapping in prelim test: 1501045
Number of HSP's gapped (non-prelim): 107331
length of query: 637
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 488
effective length of database: 8,863,183,186
effective search space: 4325233394768
effective search space used: 4325233394768
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)