BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 006642
         (637 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q5ZIB2|FBF1_CHICK Fas-binding factor 1 homolog OS=Gallus gallus GN=FBF1 PE=2 SV=1
          Length = 1132

 Score = 33.9 bits (76), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)

Query: 529 VAEALQSFCSSINQLLEQ----HHVELQQMAMGRRDVDRKLKILEREEKKMQKAMQEREK 584
           V E ++ F S ++ L  +    HH   Q++AMG R  D +LK+L+    + Q+ M+E   
Sbjct: 736 VIEQMERFSSDLHSLSHKVEATHHTTSQELAMGARQRDEQLKVLQDRLSQQQRDMEEERS 795

Query: 585 KM 586
           ++
Sbjct: 796 RL 797



 Score = 32.7 bits (73), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 6/64 (9%)

Query: 532 ALQSFCSSINQLLE-QHHVELQQMAMGRRDVDR-KLKILEREEKKMQKAMQEREKKMTSL 589
           A+QS   S+ + LE Q  +  QQ++M R +++R K  +LE ++  MQK  +ER K    L
Sbjct: 824 AVQSKVESLQRSLEEQRRLMTQQLSMERAELERAKSALLEEQKSVMQKCSEERRK----L 879

Query: 590 AREW 593
           A EW
Sbjct: 880 AVEW 883


>sp|Q62868|ROCK2_RAT Rho-associated protein kinase 2 OS=Rattus norvegicus GN=Rock2 PE=1
           SV=2
          Length = 1388

 Score = 32.7 bits (73), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 34/60 (56%)

Query: 526 EKEVAEALQSFCSSINQLLEQHHVELQQMAMGRRDVDRKLKILEREEKKMQKAMQEREKK 585
           E +  E L+  C SIN  LE+   EL++    R++V+  L+ LERE+  +Q    E ++K
Sbjct: 459 EVQAKEELEQKCKSINTRLEKTAKELEEEITFRKNVESTLRQLEREKALLQHKNAEYQRK 518


>sp|Q8TES7|FBF1_HUMAN Fas-binding factor 1 OS=Homo sapiens GN=FBF1 PE=1 SV=2
          Length = 1133

 Score = 32.7 bits (73), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 6/73 (8%)

Query: 532 ALQSFCSSINQLLE-QHHVELQQMAMGRRDVDR-KLKILEREEKKMQKAMQEREKKMTSL 589
           A QS   S+ + LE Q  V  QQMAM R +++R K  +LE ++  M K  +ER +    L
Sbjct: 828 AEQSKAESMQRALEEQRKVTAQQMAMERAELERAKSALLEEQKSVMLKCGEERRR----L 883

Query: 590 AREWNKITSTGSL 602
           A EW + ++   L
Sbjct: 884 AAEWAEFSAQQKL 896


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.315    0.128    0.374 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 233,703,147
Number of Sequences: 539616
Number of extensions: 9953722
Number of successful extensions: 50353
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 233
Number of HSP's that attempted gapping in prelim test: 46114
Number of HSP's gapped (non-prelim): 3146
length of query: 637
length of database: 191,569,459
effective HSP length: 124
effective length of query: 513
effective length of database: 124,657,075
effective search space: 63949079475
effective search space used: 63949079475
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)