Query 006645
Match_columns 637
No_of_seqs 551 out of 3256
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 05:08:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006645.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006645hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 100.0 1.5E-38 5.2E-43 328.6 33.4 260 164-467 23-291 (306)
2 2xn4_A Kelch-like protein 2; s 100.0 2.8E-38 9.5E-43 326.0 34.1 248 165-456 30-283 (302)
3 1zgk_A Kelch-like ECH-associat 100.0 4E-38 1.4E-42 326.0 33.3 247 164-455 38-293 (308)
4 2vpj_A Kelch-like protein 12; 100.0 2E-37 7E-42 319.2 33.2 247 164-455 30-284 (301)
5 4asc_A Kelch repeat and BTB do 100.0 4.8E-38 1.7E-42 326.4 27.1 249 165-455 13-283 (315)
6 2woz_A Kelch repeat and BTB do 100.0 2.7E-37 9.4E-42 321.1 28.6 249 165-455 24-293 (318)
7 1zgk_A Kelch-like ECH-associat 100.0 5.7E-36 1.9E-40 309.8 26.1 235 180-456 9-247 (308)
8 2uvk_A YJHT; unknown function, 100.0 4.2E-35 1.4E-39 309.5 27.3 246 171-456 43-349 (357)
9 3ii7_A Kelch-like protein 7; p 100.0 1E-33 3.5E-38 292.4 29.2 217 195-456 11-232 (306)
10 2vpj_A Kelch-like protein 12; 100.0 1.9E-33 6.5E-38 289.5 29.6 222 193-456 12-238 (301)
11 2xn4_A Kelch-like protein 2; s 100.0 3.4E-33 1.2E-37 287.9 29.6 219 165-409 77-300 (302)
12 2woz_A Kelch repeat and BTB do 100.0 1.9E-33 6.6E-38 292.1 23.4 215 167-410 80-309 (318)
13 4asc_A Kelch repeat and BTB do 100.0 2.3E-33 7.8E-38 291.1 23.5 215 167-410 69-299 (315)
14 2uvk_A YJHT; unknown function, 100.0 8.3E-33 2.8E-37 291.9 26.7 258 181-482 5-325 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 6.5E-33 2.2E-37 317.5 27.8 248 172-457 378-643 (695)
16 2zwa_A Leucine carboxyl methyl 100.0 4.8E-33 1.6E-37 318.6 26.3 251 164-449 411-694 (695)
17 1hbk_A ACBP, acyl-COA binding 100.0 7.3E-31 2.5E-35 214.8 8.8 88 12-107 2-89 (89)
18 2cop_A Acyl-coenzyme A binding 100.0 1.9E-30 6.4E-35 219.3 10.4 94 8-111 4-97 (109)
19 3epy_A Acyl-COA-binding domain 100.0 5.5E-31 1.9E-35 214.4 6.7 87 10-106 2-88 (89)
20 1st7_A ACBP, acyl-COA-binding 100.0 5.8E-31 2E-35 213.9 6.3 85 12-106 1-85 (86)
21 2cqu_A Peroxisomal D3,D2-enoyl 100.0 2.7E-30 9.1E-35 219.6 10.0 100 2-112 7-106 (116)
22 2lbb_A Acyl COA binding protei 100.0 4.5E-30 1.5E-34 210.5 5.6 84 14-107 12-96 (96)
23 2cb8_A Acyl-COA-binding protei 100.0 1E-29 3.4E-34 206.6 7.2 84 13-106 3-86 (87)
24 3fp5_A Acyl-COA binding protei 100.0 3.8E-29 1.3E-33 209.3 7.8 89 10-104 2-90 (106)
25 2wh5_A Acyl-COA-binding domain 100.0 5.8E-29 2E-33 208.5 6.1 94 11-110 7-100 (106)
26 3flv_A Acyl-COA-binding domain 99.9 1.1E-28 3.8E-33 209.2 6.1 90 11-106 23-112 (119)
27 1k3i_A Galactose oxidase precu 99.9 8.7E-27 3E-31 266.0 23.3 267 171-481 176-529 (656)
28 1k3i_A Galactose oxidase precu 99.9 7.2E-26 2.5E-30 258.4 21.9 241 166-447 220-547 (656)
29 3mbr_X Glutamine cyclotransfer 98.2 0.00049 1.7E-08 67.0 23.3 164 185-388 20-184 (243)
30 3dsm_A Uncharacterized protein 98.0 0.0026 8.9E-08 65.0 26.2 210 182-452 40-256 (328)
31 3nol_A Glutamine cyclotransfer 97.8 0.0022 7.6E-08 62.9 21.0 162 187-388 44-206 (262)
32 3nok_A Glutaminyl cyclase; bet 97.7 0.003 1E-07 62.1 20.0 159 187-388 56-215 (268)
33 1mix_A Talin; focal adhesion, 97.7 6.5E-05 2.2E-09 71.8 7.7 70 36-106 32-115 (206)
34 2iwa_A Glutamine cyclotransfer 97.6 0.011 3.9E-07 58.3 22.9 161 188-387 23-185 (266)
35 3dsm_A Uncharacterized protein 97.5 0.026 8.9E-07 57.4 24.0 208 190-450 88-303 (328)
36 3mbr_X Glutamine cyclotransfer 97.1 0.058 2E-06 52.3 20.2 118 245-387 20-137 (243)
37 2ovr_B FBW7, F-BOX/WD repeat p 97.0 0.12 4.2E-06 54.4 23.7 159 251-449 284-442 (445)
38 2v4h_A NF-kappa-B essential mo 96.8 0.014 4.6E-07 47.9 10.6 74 515-588 25-101 (110)
39 2fxo_A Myosin heavy chain, car 96.7 0.068 2.3E-06 46.4 15.6 75 514-588 13-87 (129)
40 3q7m_A Lipoprotein YFGL, BAMB; 96.6 0.8 2.7E-05 46.8 26.4 177 172-389 31-215 (376)
41 1l0q_A Surface layer protein; 96.5 0.12 4.1E-06 53.1 18.9 146 196-389 2-153 (391)
42 3bws_A Protein LP49; two-domai 96.3 0.23 7.8E-06 51.8 20.3 143 212-388 102-248 (433)
43 3u1c_A Tropomyosin alpha-1 cha 96.3 0.098 3.4E-06 43.2 13.2 69 519-587 7-75 (101)
44 3nol_A Glutamine cyclotransfer 96.3 0.26 8.8E-06 48.2 18.4 114 249-387 46-159 (262)
45 3oja_B Anopheles plasmodium-re 96.2 0.052 1.8E-06 60.3 15.2 18 571-588 538-555 (597)
46 1p22_A F-BOX/WD-repeat protein 96.2 0.25 8.5E-06 51.9 19.5 150 191-386 138-288 (435)
47 2dfs_A Myosin-5A; myosin-V, in 96.1 0.048 1.7E-06 64.3 14.4 12 83-94 315-326 (1080)
48 3jrp_A Fusion protein of prote 96.0 0.3 1E-05 49.4 18.9 106 195-333 22-135 (379)
49 3q7m_A Lipoprotein YFGL, BAMB; 96.0 1.6 5.3E-05 44.6 24.4 153 190-388 138-303 (376)
50 4ery_A WD repeat-containing pr 96.0 1 3.5E-05 44.4 22.2 148 195-387 76-227 (312)
51 3vgz_A Uncharacterized protein 96.0 1.1 3.7E-05 44.8 22.6 158 195-387 52-219 (353)
52 1l0q_A Surface layer protein; 96.0 0.29 1E-05 50.1 18.5 148 195-387 85-237 (391)
53 3vgz_A Uncharacterized protein 96.0 1.4 4.8E-05 43.9 23.3 200 195-451 100-305 (353)
54 2fxo_A Myosin heavy chain, car 95.9 0.38 1.3E-05 41.6 15.9 100 515-614 21-124 (129)
55 1k8k_C P40, ARP2/3 complex 41 95.9 0.3 1E-05 49.3 18.3 151 195-382 19-172 (372)
56 1i84_S Smooth muscle myosin he 95.9 0.02 6.9E-07 68.8 10.4 34 516-549 859-892 (1184)
57 4aez_A CDC20, WD repeat-contai 95.8 0.9 3.1E-05 46.9 21.8 137 211-386 113-251 (401)
58 3u1c_A Tropomyosin alpha-1 cha 95.8 0.22 7.4E-06 41.1 13.1 9 516-524 11-19 (101)
59 3o0z_A RHO-associated protein 95.8 0.27 9.4E-06 43.9 14.4 49 539-587 52-100 (168)
60 1i84_S Smooth muscle myosin he 95.8 0.028 9.5E-07 67.6 10.7 34 516-549 866-899 (1184)
61 3u59_A Tropomyosin beta chain; 95.8 0.2 6.7E-06 41.4 12.7 67 519-585 7-73 (101)
62 2v71_A Nuclear distribution pr 95.8 0.3 1E-05 44.8 14.9 8 525-532 28-35 (189)
63 3ghg_A Fibrinogen alpha chain; 95.7 0.089 3E-06 54.9 12.6 23 516-538 66-88 (562)
64 3bws_A Protein LP49; two-domai 95.7 0.78 2.7E-05 47.6 20.7 152 195-387 180-338 (433)
65 2dfs_A Myosin-5A; myosin-V, in 95.7 0.066 2.3E-06 63.2 13.1 16 592-607 1028-1043(1080)
66 3oja_B Anopheles plasmodium-re 95.7 0.12 4.2E-06 57.2 14.9 27 519-545 461-487 (597)
67 1gxr_A ESG1, transducin-like e 95.7 0.71 2.4E-05 45.6 19.4 148 195-387 108-259 (337)
68 2hqs_A Protein TOLB; TOLB, PAL 95.6 0.41 1.4E-05 50.2 18.0 195 195-450 189-388 (415)
69 2iwa_A Glutamine cyclotransfer 95.6 1.2 4.1E-05 43.7 20.0 115 249-387 24-139 (266)
70 3v9f_A Two-component system se 95.5 0.38 1.3E-05 55.1 18.6 156 211-400 469-628 (781)
71 3jsv_C NF-kappa-B essential mo 95.4 0.13 4.5E-06 40.9 9.7 72 517-588 5-79 (94)
72 1ic2_A Tropomyosin alpha chain 95.4 0.28 9.5E-06 38.7 11.8 57 556-615 20-76 (81)
73 3jrp_A Fusion protein of prote 95.3 0.38 1.3E-05 48.6 16.2 149 196-384 69-241 (379)
74 1p22_A F-BOX/WD-repeat protein 95.3 1.1 3.9E-05 46.7 20.3 149 193-386 180-328 (435)
75 1yiq_A Quinohemoprotein alcoho 95.3 5 0.00017 45.1 28.1 144 172-338 51-200 (689)
76 1kb0_A Quinohemoprotein alcoho 95.3 3.7 0.00013 46.0 25.5 144 172-339 58-208 (677)
77 2hqs_A Protein TOLB; TOLB, PAL 95.3 1.4 4.8E-05 45.9 20.9 159 195-389 143-306 (415)
78 3nok_A Glutaminyl cyclase; bet 95.2 0.72 2.5E-05 45.1 16.7 112 248-387 57-168 (268)
79 4aez_A CDC20, WD repeat-contai 95.2 0.67 2.3E-05 47.9 18.0 111 255-389 228-342 (401)
80 3hnw_A Uncharacterized protein 95.2 0.17 6E-06 44.2 10.9 56 535-590 68-123 (138)
81 2eqb_B RAB guanine nucleotide 95.2 0.37 1.3E-05 38.8 11.7 29 519-547 10-38 (97)
82 2jee_A YIIU; FTSZ, septum, coi 95.0 0.27 9.2E-06 38.2 10.1 64 523-586 8-71 (81)
83 3u59_A Tropomyosin beta chain; 94.9 0.66 2.3E-05 38.2 13.3 49 516-564 11-59 (101)
84 3fm0_A Protein CIAO1; WDR39,SG 94.9 1.1 3.7E-05 45.3 18.2 156 195-389 27-187 (345)
85 3cve_A Homer protein homolog 1 94.9 0.34 1.2E-05 36.8 10.2 64 539-605 4-67 (72)
86 3cvf_A Homer-3, homer protein 94.8 0.17 5.9E-06 39.2 8.6 66 537-605 8-73 (79)
87 4ery_A WD repeat-containing pr 94.8 2.7 9.2E-05 41.3 20.3 147 195-387 34-184 (312)
88 3v7d_B Cell division control p 94.7 2.4 8.3E-05 44.3 21.1 148 195-388 279-426 (464)
89 2ojh_A Uncharacterized protein 94.7 1.4 4.9E-05 42.2 17.8 157 195-389 52-212 (297)
90 3ghg_A Fibrinogen alpha chain; 94.7 0.22 7.4E-06 52.1 11.7 22 589-610 133-154 (562)
91 3o0z_A RHO-associated protein 94.7 1.1 3.9E-05 39.9 14.7 70 519-588 11-80 (168)
92 1gxr_A ESG1, transducin-like e 94.7 1.5 5.2E-05 43.1 18.3 109 255-387 108-218 (337)
93 2z3z_A Dipeptidyl aminopeptida 94.6 2.2 7.6E-05 47.6 21.4 157 210-390 234-398 (706)
94 4h22_A Leucine-rich repeat fli 94.5 0.14 4.7E-06 41.5 7.7 66 525-590 20-85 (103)
95 3e5z_A Putative gluconolactona 94.4 2.9 9.9E-05 40.8 19.5 153 196-386 40-206 (296)
96 3jro_A Fusion protein of prote 94.4 1 3.6E-05 51.2 18.1 106 195-333 20-133 (753)
97 1m1j_B Fibrinogen beta chain; 94.3 0.86 2.9E-05 47.9 15.6 26 539-564 125-150 (464)
98 3ow8_A WD repeat-containing pr 94.3 4.2 0.00014 40.4 20.8 107 255-387 175-283 (321)
99 3u4y_A Uncharacterized protein 94.3 2.4 8.1E-05 41.9 18.9 145 195-383 9-160 (331)
100 2aq5_A Coronin-1A; WD40 repeat 94.3 3.2 0.00011 42.6 20.2 154 195-385 93-256 (402)
101 3q8t_A Beclin-1; autophagy, AT 94.3 1.2 4.3E-05 36.1 13.1 42 524-565 7-48 (96)
102 2efr_A General control protein 94.2 1.1 3.6E-05 39.8 13.6 43 569-611 69-115 (155)
103 1ic2_A Tropomyosin alpha chain 94.2 0.39 1.3E-05 37.8 9.9 46 520-565 5-50 (81)
104 3dwl_C Actin-related protein 2 94.0 0.24 8.2E-06 50.5 10.8 152 195-385 22-179 (377)
105 1jmx_B Amine dehydrogenase; ox 94.0 1.5 5.2E-05 43.5 16.6 160 195-388 10-180 (349)
106 3hnw_A Uncharacterized protein 93.9 0.42 1.4E-05 41.7 10.3 12 595-606 118-129 (138)
107 4gqb_B Methylosome protein 50; 93.9 2.6 8.9E-05 42.7 18.4 106 255-385 138-248 (344)
108 3bas_A Myosin heavy chain, str 93.9 0.55 1.9E-05 37.6 10.3 37 553-589 46-82 (89)
109 2z2n_A Virginiamycin B lyase; 93.8 4.9 0.00017 38.6 20.9 155 189-389 102-260 (299)
110 3i00_A HIP-I, huntingtin-inter 93.8 0.29 1E-05 41.5 8.8 76 510-588 11-86 (120)
111 1ri6_A Putative isomerase YBHE 93.8 3.8 0.00013 40.3 19.2 162 195-390 140-317 (343)
112 1ri6_A Putative isomerase YBHE 93.8 3.6 0.00012 40.5 19.0 154 195-387 49-215 (343)
113 3v7d_B Cell division control p 93.8 6.6 0.00022 40.9 21.9 155 195-387 172-345 (464)
114 3ei3_B DNA damage-binding prot 93.7 5.6 0.00019 40.2 20.6 144 197-383 87-236 (383)
115 3jro_A Fusion protein of prote 93.7 0.43 1.5E-05 54.4 13.1 149 196-384 67-239 (753)
116 2ad6_A Methanol dehydrogenase 93.7 9.8 0.00034 41.5 24.5 128 189-339 56-194 (571)
117 3ow8_A WD repeat-containing pr 93.7 6.2 0.00021 39.2 21.3 108 255-387 91-199 (321)
118 2ovr_B FBW7, F-BOX/WD repeat p 93.5 4.6 0.00016 42.0 20.1 117 252-383 325-442 (445)
119 2v4h_A NF-kappa-B essential mo 93.5 0.92 3.2E-05 37.1 10.8 27 538-564 27-53 (110)
120 2z2n_A Virginiamycin B lyase; 93.5 5.6 0.00019 38.3 19.9 150 195-389 67-218 (299)
121 1got_B GT-beta; complex (GTP-b 93.5 6.7 0.00023 39.1 22.4 105 255-386 154-260 (340)
122 1r5m_A SIR4-interacting protei 93.5 1.6 5.5E-05 44.6 16.1 151 191-385 212-363 (425)
123 3vkg_A Dynein heavy chain, cyt 93.4 0.44 1.5E-05 61.9 13.5 29 516-544 1936-1964(3245)
124 3hfq_A Uncharacterized protein 93.4 3.1 0.00011 41.5 17.9 148 212-388 19-177 (347)
125 1kv9_A Type II quinohemoprotei 93.4 12 0.0004 41.7 25.9 144 172-339 47-196 (668)
126 4a2l_A BT_4663, two-component 93.4 1.3 4.4E-05 50.6 16.6 157 211-400 471-631 (795)
127 1q7f_A NHL, brain tumor CG1071 93.3 6.1 0.00021 38.0 22.2 159 195-390 40-201 (286)
128 4gqb_B Methylosome protein 50; 93.3 2.7 9.2E-05 42.6 17.2 149 195-388 138-294 (344)
129 4g56_B MGC81050 protein; prote 93.2 1.3 4.3E-05 45.2 14.6 149 195-388 150-306 (357)
130 3vl1_A 26S proteasome regulato 93.2 5.4 0.00019 40.7 19.7 104 195-335 108-215 (420)
131 1flg_A Protein (quinoprotein e 93.2 9.3 0.00032 41.8 22.4 139 172-338 47-201 (582)
132 1pjx_A Dfpase, DIISOPROPYLFLUO 93.1 3.5 0.00012 40.3 17.4 156 196-385 83-258 (314)
133 2ojh_A Uncharacterized protein 93.1 4.5 0.00015 38.5 17.9 146 210-389 21-168 (297)
134 3u4y_A Uncharacterized protein 93.0 3.9 0.00013 40.2 17.8 152 195-386 51-210 (331)
135 3hfq_A Uncharacterized protein 93.0 3.7 0.00013 40.9 17.7 163 195-389 50-226 (347)
136 2eqb_B RAB guanine nucleotide 93.0 1.6 5.4E-05 35.2 11.3 50 539-588 9-58 (97)
137 1pjx_A Dfpase, DIISOPROPYLFLUO 92.9 5.6 0.00019 38.7 18.6 163 195-386 28-211 (314)
138 2qc5_A Streptogramin B lactona 92.9 6.9 0.00024 37.6 19.3 150 195-389 30-181 (300)
139 4f7g_A Talin-1; alpha-helix bu 92.9 0.21 7.4E-06 47.6 7.5 70 36-106 43-126 (222)
140 1qhu_A Protein (hemopexin); be 92.8 2.1 7.3E-05 45.3 15.8 59 195-282 158-216 (460)
141 2ecf_A Dipeptidyl peptidase IV 92.7 2.2 7.6E-05 47.9 17.1 126 195-340 47-189 (741)
142 4gga_A P55CDC, cell division c 92.7 8 0.00027 39.8 20.3 136 211-384 125-262 (420)
143 1vyh_C Platelet-activating fac 92.6 9.1 0.00031 39.4 20.6 146 196-387 120-269 (410)
144 2xdw_A Prolyl endopeptidase; a 92.6 8.4 0.00029 43.1 21.6 170 195-390 135-330 (710)
145 1x79_B RAB GTPase binding effe 92.6 2.4 8.1E-05 35.2 12.1 27 517-543 9-35 (112)
146 1r5m_A SIR4-interacting protei 92.5 4 0.00014 41.4 17.5 107 255-387 216-323 (425)
147 3vl1_A 26S proteasome regulato 92.5 10 0.00035 38.5 21.9 106 255-387 108-216 (420)
148 2z3z_A Dipeptidyl aminopeptida 92.5 9 0.00031 42.5 21.6 114 270-390 233-351 (706)
149 4a11_B DNA excision repair pro 92.4 3.3 0.00011 41.9 16.6 152 195-386 111-279 (408)
150 3zwl_B Eukaryotic translation 92.4 3.9 0.00013 40.6 16.9 151 195-383 43-206 (369)
151 3vkg_A Dynein heavy chain, cyt 92.4 1.3 4.3E-05 57.8 15.4 13 214-226 1408-1420(3245)
152 1erj_A Transcriptional repress 92.2 4.7 0.00016 41.3 17.5 147 195-384 134-288 (393)
153 3mkq_A Coatomer beta'-subunit; 92.2 3.8 0.00013 46.3 18.3 147 195-386 66-220 (814)
154 3mq7_A Bone marrow stromal ant 92.1 4.3 0.00015 33.4 14.0 36 569-607 70-105 (121)
155 2oto_A M protein; helical coil 92.0 4.8 0.00016 35.8 14.8 47 519-565 34-80 (155)
156 3oja_A Leucine-rich immune mol 92.0 0.67 2.3E-05 49.8 11.0 8 214-221 83-90 (487)
157 1kb0_A Quinohemoprotein alcoho 92.0 8.6 0.00029 43.0 20.5 83 189-288 122-208 (677)
158 3ol1_A Vimentin; structural ge 91.9 4.5 0.00015 34.2 13.7 49 568-616 60-116 (119)
159 1rwi_B Serine/threonine-protei 91.9 8.2 0.00028 36.6 17.9 149 195-388 34-185 (270)
160 4a11_B DNA excision repair pro 91.9 3.2 0.00011 42.1 15.6 157 195-384 55-219 (408)
161 3no2_A Uncharacterized protein 91.8 8 0.00028 37.6 17.9 167 172-388 28-202 (276)
162 3mkq_A Coatomer beta'-subunit; 91.8 3.8 0.00013 46.3 17.7 147 195-385 24-174 (814)
163 2dg1_A DRP35, lactonase; beta 91.8 2.8 9.7E-05 41.5 14.8 155 195-383 55-213 (333)
164 1got_B GT-beta; complex (GTP-b 91.8 11 0.00038 37.4 21.3 107 255-385 195-303 (340)
165 1rwi_B Serine/threonine-protei 91.8 8 0.00027 36.6 17.7 152 190-386 71-225 (270)
166 1pex_A Collagenase-3, MMP-13; 91.4 7.9 0.00027 36.2 16.3 158 189-387 27-196 (207)
167 4e54_B DNA damage-binding prot 91.4 3.6 0.00012 42.8 15.7 149 195-385 131-284 (435)
168 3qh9_A Liprin-beta-2; coiled-c 91.4 2 6.7E-05 33.1 9.5 33 532-564 23-55 (81)
169 1deq_A Fibrinogen (alpha chain 91.3 2.7 9.3E-05 42.3 13.3 33 514-546 67-99 (390)
170 4e54_B DNA damage-binding prot 91.3 3.3 0.00011 43.2 15.3 109 255-385 131-242 (435)
171 2qc5_A Streptogramin B lactona 91.2 11 0.00037 36.1 19.5 150 195-389 72-223 (300)
172 1nir_A Nitrite reductase; hemo 91.2 9.5 0.00033 41.3 19.3 162 188-389 181-361 (543)
173 1sq9_A Antiviral protein SKI8; 91.2 11 0.00037 38.0 18.8 112 257-387 82-220 (397)
174 3pe7_A Oligogalacturonate lyas 91.1 13 0.00044 37.4 19.4 167 195-390 46-232 (388)
175 3mq9_A Bone marrow stromal ant 91.1 2.8 9.7E-05 44.6 14.7 20 86-106 29-48 (471)
176 2ad6_A Methanol dehydrogenase 91.1 17 0.00058 39.6 21.3 81 190-288 110-194 (571)
177 3tnu_B Keratin, type II cytosk 91.1 1.6 5.4E-05 37.6 10.2 32 532-563 40-71 (129)
178 1ef1_A Moesin; membrane, FERM 91.1 0.27 9.3E-06 49.1 6.1 70 36-106 110-199 (294)
179 1k8k_C P40, ARP2/3 complex 41 91.0 1.9 6.7E-05 43.2 12.8 108 255-384 19-128 (372)
180 2xbg_A YCF48-like protein; pho 91.0 14 0.00047 36.9 19.6 172 172-390 110-286 (327)
181 3zwl_B Eukaryotic translation 91.0 5.9 0.0002 39.2 16.3 109 255-385 186-306 (369)
182 3cvf_A Homer-3, homer protein 91.0 1.6 5.6E-05 33.7 8.9 30 524-553 9-38 (79)
183 3qij_A Protein 4.1; cytoskelet 90.8 0.22 7.4E-06 49.9 5.1 72 35-107 123-206 (296)
184 2v66_B Nuclear distribution pr 90.8 6.2 0.00021 32.7 14.7 26 589-614 79-104 (111)
185 1h4r_A Merlin; FERM, neurofibr 90.8 0.31 1.1E-05 49.2 6.3 69 36-105 130-218 (314)
186 2zqm_A Prefoldin beta subunit 90.7 2.6 9E-05 35.4 11.2 26 591-616 88-113 (117)
187 1yiq_A Quinohemoprotein alcoho 90.7 23 0.0008 39.5 22.4 81 190-287 116-200 (689)
188 1sq9_A Antiviral protein SKI8; 90.6 9.5 0.00032 38.4 17.8 72 306-386 197-270 (397)
189 4g56_B MGC81050 protein; prote 90.6 2.7 9.3E-05 42.6 13.5 66 306-386 150-216 (357)
190 3g4e_A Regucalcin; six bladed 90.5 12 0.0004 36.6 17.7 152 195-386 24-185 (297)
191 3g4e_A Regucalcin; six bladed 90.5 4.4 0.00015 39.7 14.6 160 195-387 64-233 (297)
192 1m1j_B Fibrinogen beta chain; 90.4 4.7 0.00016 42.4 14.8 15 595-609 176-190 (464)
193 3q8t_A Beclin-1; autophagy, AT 90.4 6.1 0.00021 31.9 12.9 40 516-555 13-52 (96)
194 1pby_B Quinohemoprotein amine 90.3 5.2 0.00018 39.1 15.1 53 324-387 220-273 (337)
195 1wt6_A Myotonin-protein kinase 90.3 2.1 7.1E-05 33.0 8.8 16 540-555 29-44 (81)
196 2b9c_A Striated-muscle alpha t 90.3 5.9 0.0002 34.8 13.2 42 550-591 74-115 (147)
197 3oja_A Leucine-rich immune mol 90.2 1.8 6.1E-05 46.4 12.1 14 273-286 145-158 (487)
198 1q7f_A NHL, brain tumor CG1071 90.2 13 0.00045 35.5 24.0 160 189-389 80-244 (286)
199 3bas_A Myosin heavy chain, str 90.2 5.1 0.00018 31.9 11.7 38 574-614 46-83 (89)
200 3tnu_A Keratin, type I cytoske 90.2 1.5 5.2E-05 37.9 9.3 34 530-563 40-73 (131)
201 3ni0_A Bone marrow stromal ant 90.1 3.5 0.00012 32.6 10.1 17 571-587 68-84 (99)
202 2xdw_A Prolyl endopeptidase; a 90.1 10 0.00034 42.5 18.9 180 193-390 81-283 (710)
203 1f5n_A Interferon-induced guan 90.0 2.5 8.7E-05 46.3 13.0 14 575-588 543-556 (592)
204 1pgu_A Actin interacting prote 89.9 7.4 0.00025 42.0 17.1 111 255-387 77-196 (615)
205 4a2l_A BT_4663, two-component 89.8 10 0.00035 43.1 18.7 145 212-390 428-578 (795)
206 3c5m_A Oligogalacturonate lyas 89.7 7.4 0.00025 39.2 16.0 153 211-390 168-336 (396)
207 3sfz_A APAF-1, apoptotic pepti 89.7 2.7 9.3E-05 50.4 14.4 147 195-385 972-1118(1249)
208 3sfz_A APAF-1, apoptotic pepti 89.7 21 0.00071 42.6 22.2 145 195-385 626-776 (1249)
209 3fvz_A Peptidyl-glycine alpha- 89.6 17 0.00059 35.9 23.7 149 211-388 69-232 (329)
210 3cve_A Homer protein homolog 1 89.5 3.9 0.00013 31.0 9.7 22 530-551 9-30 (72)
211 2k48_A Nucleoprotein; viral pr 89.4 2.1 7.3E-05 34.5 8.6 28 522-549 36-63 (107)
212 4gkw_A Spindle assembly abnorm 89.4 8.7 0.0003 32.2 13.0 19 516-534 13-31 (167)
213 3ivf_A Talin-1; FERM domain, c 89.4 0.71 2.4E-05 47.8 7.7 70 36-106 197-280 (371)
214 2k48_A Nucleoprotein; viral pr 89.2 3.6 0.00012 33.2 9.7 12 575-586 87-98 (107)
215 3azo_A Aminopeptidase; POP fam 89.1 5.4 0.00018 44.0 15.4 154 210-390 160-332 (662)
216 3dwl_C Actin-related protein 2 89.1 0.73 2.5E-05 46.8 7.6 109 255-385 22-133 (377)
217 3ei3_B DNA damage-binding prot 89.0 14 0.00048 37.1 17.5 111 257-389 87-200 (383)
218 1t3j_A Mitofusin 1; coiled coi 89.0 1.3 4.6E-05 35.5 7.2 42 573-614 50-91 (96)
219 2pbi_B Guanine nucleotide-bind 88.9 20 0.00069 35.8 22.1 148 255-450 165-316 (354)
220 3dm0_A Maltose-binding peripla 88.7 13 0.00046 41.2 18.5 149 195-386 441-595 (694)
221 3iz6_a 40S ribosomal protein R 88.6 12 0.00042 37.8 16.8 111 255-383 260-375 (380)
222 1kv9_A Type II quinohemoprotei 88.6 30 0.001 38.5 21.0 81 190-288 112-196 (668)
223 1qks_A Cytochrome CD1 nitrite 88.3 25 0.00085 38.3 19.7 125 255-398 254-389 (567)
224 3jsv_C NF-kappa-B essential mo 88.3 3.8 0.00013 32.6 9.2 14 601-614 68-81 (94)
225 2vdu_B TRNA (guanine-N(7)-)-me 88.3 26 0.00089 36.2 19.5 65 256-336 210-275 (450)
226 4emc_A Monopolin complex subun 88.2 2.5 8.4E-05 38.2 9.2 32 522-553 7-38 (190)
227 1gen_A Gelatinase A; hydrolase 88.2 17 0.00059 34.1 16.7 157 189-385 34-204 (218)
228 2fp8_A Strictosidine synthase; 88.1 15 0.0005 36.3 16.6 169 189-390 83-276 (322)
229 3ol1_A Vimentin; structural ge 88.1 6.5 0.00022 33.2 11.6 50 553-602 66-116 (119)
230 3tnu_B Keratin, type II cytosk 88.1 10 0.00035 32.5 13.0 13 598-610 107-119 (129)
231 4aow_A Guanine nucleotide-bind 88.1 20 0.00069 34.8 18.7 102 257-386 186-289 (340)
232 3mmy_A MRNA export factor; mRN 88.0 15 0.00053 36.0 16.8 145 195-384 97-248 (368)
233 2dg1_A DRP35, lactonase; beta 87.9 12 0.00041 36.8 15.8 121 255-389 55-177 (333)
234 3odt_A Protein DOA1; ubiquitin 87.9 19 0.00067 34.4 19.5 144 194-381 27-172 (313)
235 2efr_A General control protein 87.9 14 0.00047 32.6 15.5 35 554-588 75-109 (155)
236 3tnu_A Keratin, type I cytoske 87.8 8.1 0.00028 33.2 12.2 12 599-610 110-121 (131)
237 1nir_A Nitrite reductase; hemo 87.8 9 0.00031 41.5 15.7 149 211-386 302-461 (543)
238 2ocy_A RAB guanine nucleotide 87.8 11 0.00037 33.2 12.9 13 575-587 113-125 (154)
239 2pm7_B Protein transport prote 87.8 21 0.00071 34.6 17.6 106 195-333 20-133 (297)
240 4gga_A P55CDC, cell division c 87.6 24 0.00082 36.1 18.4 54 323-385 301-355 (420)
241 1jmx_B Amine dehydrogenase; ox 87.5 2.9 9.8E-05 41.4 10.8 115 255-384 10-135 (349)
242 1yfq_A Cell cycle arrest prote 87.5 22 0.00076 34.6 17.5 146 195-383 67-225 (342)
243 2i1j_A Moesin; FERM, coiled-co 87.5 0.44 1.5E-05 52.3 4.8 66 36-101 113-198 (575)
244 1vyh_C Platelet-activating fac 87.4 12 0.00041 38.5 15.9 106 255-386 119-226 (410)
245 2lw1_A ABC transporter ATP-bin 87.3 3.4 0.00012 32.9 8.9 25 542-566 22-46 (89)
246 3scy_A Hypothetical bacterial 87.3 25 0.00084 34.9 23.9 33 352-389 215-248 (361)
247 4aow_A Guanine nucleotide-bind 87.3 6.6 0.00022 38.5 13.3 146 197-384 186-338 (340)
248 2xyi_A Probable histone-bindin 87.2 6.5 0.00022 40.8 13.8 65 309-384 196-264 (430)
249 2bkl_A Prolyl endopeptidase; m 87.1 12 0.00042 41.6 16.8 165 195-389 178-357 (695)
250 2xdj_A Uncharacterized protein 87.0 4.9 0.00017 31.5 9.2 11 554-564 32-42 (83)
251 3i2n_A WD repeat-containing pr 86.9 11 0.00036 37.2 14.7 105 255-384 179-292 (357)
252 1yr2_A Prolyl oligopeptidase; 86.7 24 0.00082 39.6 19.1 170 195-390 173-359 (741)
253 3scy_A Hypothetical bacterial 86.7 27 0.00091 34.7 21.6 158 197-384 14-187 (361)
254 4dci_A Uncharacterized protein 86.7 3.3 0.00011 36.4 8.9 16 596-611 86-101 (150)
255 1pgu_A Actin interacting prote 86.6 37 0.0013 36.3 21.8 105 256-384 456-573 (615)
256 2b9c_A Striated-muscle alpha t 86.6 5.6 0.00019 34.9 10.5 52 524-575 27-78 (147)
257 3fm0_A Protein CIAO1; WDR39,SG 86.5 6.3 0.00021 39.5 12.8 109 255-384 27-137 (345)
258 3s84_A Apolipoprotein A-IV; fo 86.4 19 0.00065 35.1 15.5 10 556-565 66-75 (273)
259 2i1j_A Moesin; FERM, coiled-co 86.3 0.9 3.1E-05 49.8 6.5 9 375-383 224-232 (575)
260 3iox_A AGI/II, PA; alpha helix 86.3 20 0.00067 37.6 15.9 28 591-618 84-111 (497)
261 2bkl_A Prolyl endopeptidase; m 86.3 9.2 0.00032 42.6 15.2 180 194-390 78-268 (695)
262 1pby_B Quinohemoprotein amine 86.3 20 0.0007 34.7 16.4 145 211-387 11-167 (337)
263 3lrv_A PRE-mRNA-splicing facto 86.3 27 0.00094 34.4 20.8 67 306-386 138-204 (343)
264 3c5m_A Oligogalacturonate lyas 86.2 6.3 0.00021 39.7 12.8 155 211-389 216-390 (396)
265 1ik9_A DNA repair protein XRCC 86.0 12 0.00041 35.1 13.1 22 527-548 138-159 (213)
266 3bg1_A Protein SEC13 homolog; 85.9 24 0.00081 34.6 16.6 111 195-338 24-143 (316)
267 2ynn_A Coatomer subunit beta'; 85.8 27 0.00092 33.9 18.2 147 195-384 24-173 (304)
268 3v9f_A Two-component system se 85.7 6.8 0.00023 44.4 13.9 137 212-383 516-656 (781)
269 2ecf_A Dipeptidyl peptidase IV 85.6 43 0.0015 37.1 20.4 111 271-389 262-374 (741)
270 3i2n_A WD repeat-containing pr 85.5 20 0.00068 35.1 15.9 152 196-387 31-203 (357)
271 3a7p_A Autophagy protein 16; c 85.4 16 0.00055 31.8 12.5 27 538-564 71-97 (152)
272 2pm9_A Protein WEB1, protein t 85.4 17 0.00058 36.7 15.7 114 255-388 78-202 (416)
273 3dr2_A Exported gluconolactona 85.3 28 0.00094 33.9 16.7 157 195-385 56-226 (305)
274 2pm9_A Protein WEB1, protein t 85.3 15 0.0005 37.2 15.2 113 256-384 126-250 (416)
275 2ece_A 462AA long hypothetical 85.3 30 0.001 36.4 17.2 180 194-390 94-296 (462)
276 3k29_A Putative uncharacterize 85.3 19 0.00066 31.8 15.4 7 564-570 100-106 (169)
277 3mq9_A Bone marrow stromal ant 85.3 9.5 0.00033 40.4 14.0 8 194-201 113-120 (471)
278 2pbi_B Guanine nucleotide-bind 85.3 32 0.0011 34.3 20.8 106 255-385 209-317 (354)
279 2xyi_A Probable histone-bindin 85.1 12 0.00041 38.7 14.6 103 258-383 196-309 (430)
280 1gk4_A Vimentin; intermediate 85.1 10 0.00035 29.7 10.5 18 518-535 5-22 (84)
281 3ajw_A Flagellar FLIJ protein; 85.0 19 0.00063 31.3 15.3 38 513-550 11-48 (150)
282 3c7x_A Matrix metalloproteinas 85.0 19 0.00064 33.2 14.0 153 190-385 10-177 (196)
283 3iuj_A Prolyl endopeptidase; h 85.0 52 0.0018 36.5 21.2 169 195-390 139-324 (693)
284 1ik9_A DNA repair protein XRCC 84.9 8.6 0.00029 36.0 11.6 30 532-561 136-165 (213)
285 2vdu_B TRNA (guanine-N(7)-)-me 84.9 24 0.00082 36.5 16.9 159 196-387 210-397 (450)
286 2ghs_A AGR_C_1268P; regucalcin 84.9 23 0.0008 35.0 16.1 147 195-382 60-209 (326)
287 3au4_A Myosin-X; protein-prote 84.8 1.4 4.8E-05 48.2 7.2 71 35-107 334-452 (555)
288 2ic9_A Nucleocapsid protein; h 84.8 6.5 0.00022 31.3 8.9 16 573-588 55-70 (96)
289 2no2_A HIP-I, huntingtin-inter 84.8 15 0.00052 30.2 13.9 23 580-602 61-83 (107)
290 3k26_A Polycomb protein EED; W 84.5 27 0.00092 34.2 16.4 108 307-450 85-193 (366)
291 1go4_E MAD1 (mitotic arrest de 84.4 2.5 8.5E-05 34.3 6.5 30 536-565 13-42 (100)
292 1f5n_A Interferon-induced guan 84.3 6.4 0.00022 43.1 12.0 12 604-615 570-581 (592)
293 3ju4_A Endo-N-acetylneuraminid 84.3 40 0.0014 34.6 18.8 181 172-367 271-481 (670)
294 3azo_A Aminopeptidase; POP fam 84.2 23 0.00079 38.7 17.1 149 211-390 217-376 (662)
295 2xdj_A Uncharacterized protein 84.2 6.8 0.00023 30.7 8.8 10 574-583 31-40 (83)
296 2e7s_A RAB guanine nucleotide 84.2 1.6 5.6E-05 37.4 5.6 13 533-545 44-56 (135)
297 1yr2_A Prolyl oligopeptidase; 84.2 19 0.00066 40.4 16.7 149 210-390 293-448 (741)
298 3ott_A Two-component system se 84.0 24 0.00082 39.7 17.4 142 195-383 482-626 (758)
299 2ic6_A Nucleocapsid protein; h 84.0 6.3 0.00021 30.2 8.2 12 575-586 57-68 (78)
300 3fx0_A NF-kappa-B essential mo 83.9 0.19 6.4E-06 39.9 -0.3 71 516-586 19-92 (96)
301 4fi5_A Nucleoprotein; structur 83.9 4.6 0.00016 33.0 7.8 16 573-588 72-87 (113)
302 1m1j_A Fibrinogen alpha subuni 83.8 18 0.00062 37.2 14.0 22 589-610 134-155 (491)
303 1itv_A MMP9; adaptive molecula 83.8 26 0.0009 32.2 17.5 155 189-386 10-177 (195)
304 1qks_A Cytochrome CD1 nitrite 83.8 26 0.0009 38.1 16.9 198 211-451 320-540 (567)
305 4b6x_A AVRRPS4, avirulence pro 83.6 10 0.00035 28.9 9.0 24 540-563 27-50 (90)
306 1w6s_A Methanol dehydrogenase 83.5 56 0.0019 35.7 19.4 80 191-288 111-200 (599)
307 3iz6_a 40S ribosomal protein R 83.5 40 0.0014 33.9 23.4 109 255-386 217-332 (380)
308 1w6s_A Methanol dehydrogenase 82.8 60 0.002 35.5 24.1 128 189-339 56-200 (599)
309 3k26_A Polycomb protein EED; W 82.7 37 0.0013 33.1 18.1 107 256-385 85-194 (366)
310 2lw1_A ABC transporter ATP-bin 82.7 4.2 0.00014 32.4 7.3 23 537-559 24-46 (89)
311 2aq5_A Coronin-1A; WD40 repeat 82.6 18 0.00061 36.7 14.4 152 197-385 145-301 (402)
312 3lay_A Zinc resistance-associa 82.5 8.5 0.00029 34.8 10.1 8 558-565 94-101 (175)
313 3e5z_A Putative gluconolactona 82.3 25 0.00086 33.8 14.8 161 195-390 79-253 (296)
314 3iv1_A Tumor susceptibility ge 82.3 15 0.00051 28.2 10.2 21 574-594 50-70 (78)
315 3dm0_A Maltose-binding peripla 82.2 35 0.0012 37.7 17.7 109 255-387 441-554 (694)
316 3ba0_A Macrophage metalloelast 82.2 47 0.0016 33.8 17.6 158 189-388 184-355 (365)
317 1su3_A Interstitial collagenas 82.1 20 0.00069 37.7 14.5 157 190-388 267-437 (450)
318 1yfq_A Cell cycle arrest prote 82.1 39 0.0013 32.8 18.1 104 255-383 67-179 (342)
319 3lay_A Zinc resistance-associa 82.0 4 0.00014 37.0 7.7 12 574-585 117-128 (175)
320 4h22_A Leucine-rich repeat fli 81.9 19 0.00065 29.1 11.0 23 592-614 63-85 (103)
321 3swk_A Vimentin; cytoskeleton, 81.9 17 0.00058 28.6 10.5 48 558-605 30-81 (86)
322 3ott_A Two-component system se 81.7 62 0.0021 36.2 19.6 157 195-389 383-551 (758)
323 1l8d_A DNA double-strand break 81.6 17 0.00058 30.0 11.2 10 599-608 90-99 (112)
324 3pe7_A Oligogalacturonate lyas 81.5 29 0.00099 34.7 15.4 112 271-390 167-280 (388)
325 2q6q_A Spindle POLE BODY compo 81.5 10 0.00036 27.8 8.1 39 562-600 9-47 (74)
326 4h5i_A Guanine nucleotide-exch 81.1 48 0.0016 33.2 21.3 144 211-386 157-303 (365)
327 2hes_X YDR267CP; beta-propelle 81.0 44 0.0015 32.8 21.2 160 191-389 20-190 (330)
328 4emc_A Monopolin complex subun 80.8 4.7 0.00016 36.4 7.5 47 519-565 11-57 (190)
329 1x8y_A Lamin A/C; structural p 80.6 8.1 0.00028 30.5 8.2 7 526-532 15-21 (86)
330 2e7s_A RAB guanine nucleotide 80.4 11 0.00036 32.4 9.3 29 540-568 30-58 (135)
331 2ghs_A AGR_C_1268P; regucalcin 80.3 47 0.0016 32.7 20.2 157 194-389 99-266 (326)
332 3ibp_A Chromosome partition pr 80.3 22 0.00076 34.5 12.6 28 519-546 8-35 (302)
333 3iuj_A Prolyl endopeptidase; h 80.1 37 0.0013 37.7 16.9 146 211-391 259-413 (693)
334 3iv1_A Tumor susceptibility ge 80.1 18 0.00061 27.8 9.5 11 592-602 58-68 (78)
335 1qhu_A Protein (hemopexin); be 80.0 63 0.0022 34.0 17.8 59 255-333 158-216 (460)
336 2hes_X YDR267CP; beta-propelle 79.9 17 0.00057 36.0 12.7 150 195-382 164-327 (330)
337 1fxk_A Prefoldin; archaeal pro 79.8 16 0.00054 29.8 10.3 24 538-561 11-34 (107)
338 4dk0_A Putative MACA; alpha-ha 79.5 3.6 0.00012 42.1 7.6 17 598-614 133-149 (369)
339 3mov_A Lamin-B1; LMNB1, B-type 79.3 7.3 0.00025 31.4 7.6 8 525-532 23-30 (95)
340 3no2_A Uncharacterized protein 79.1 47 0.0016 32.0 20.6 150 195-388 4-161 (276)
341 2ynn_A Coatomer subunit beta'; 79.0 48 0.0016 32.0 18.5 148 195-386 66-220 (304)
342 3lrv_A PRE-mRNA-splicing facto 78.8 52 0.0018 32.3 18.7 154 195-388 138-299 (343)
343 3ibp_A Chromosome partition pr 78.8 21 0.00071 34.8 11.8 35 523-557 5-39 (302)
344 1erj_A Transcriptional repress 78.7 58 0.002 32.8 21.4 106 255-387 134-242 (393)
345 3hrp_A Uncharacterized protein 78.4 64 0.0022 33.1 19.9 152 195-384 141-299 (409)
346 4dk0_A Putative MACA; alpha-ha 78.4 7.6 0.00026 39.6 9.7 27 587-613 129-155 (369)
347 3ju4_A Endo-N-acetylneuraminid 78.3 64 0.0022 33.1 23.7 121 241-366 279-405 (670)
348 1lwu_C Fibrinogen gamma chain; 78.3 3.7 0.00013 41.1 6.8 44 540-583 10-53 (323)
349 3i00_A HIP-I, huntingtin-inter 78.3 12 0.0004 31.6 8.9 42 537-581 17-58 (120)
350 1pex_A Collagenase-3, MMP-13; 78.1 44 0.0015 31.0 17.5 111 250-385 28-147 (207)
351 2qyw_A Vesicle transport throu 77.8 18 0.00063 29.4 9.8 53 555-609 48-100 (102)
352 3a7o_A Autophagy protein 16; c 77.6 17 0.00058 26.9 8.2 36 523-558 20-55 (75)
353 3hrp_A Uncharacterized protein 77.4 68 0.0023 32.9 17.2 111 255-389 141-255 (409)
354 3dr2_A Exported gluconolactona 77.1 55 0.0019 31.6 16.1 166 195-390 96-274 (305)
355 2zqm_A Prefoldin beta subunit 77.0 30 0.001 28.6 11.8 23 538-560 16-38 (117)
356 1itv_A MMP9; adaptive molecula 76.8 45 0.0015 30.5 14.6 111 250-385 11-129 (195)
357 1xfd_A DIP, dipeptidyl aminope 76.3 52 0.0018 36.2 16.7 111 212-340 38-151 (723)
358 3oyo_A Hemopexin fold protein 76.3 41 0.0014 31.7 13.3 62 306-382 127-197 (225)
359 4b6x_A AVRRPS4, avirulence pro 76.3 17 0.00059 27.6 8.2 26 525-550 26-51 (90)
360 3fvz_A Peptidyl-glycine alpha- 76.0 62 0.0021 31.7 25.8 169 195-389 101-283 (329)
361 3odt_A Protein DOA1; ubiquitin 76.0 54 0.0019 31.0 20.8 106 255-388 154-260 (313)
362 2w83_C C-JUN-amino-terminal ki 75.9 21 0.00071 27.1 8.5 50 515-564 10-59 (77)
363 3bg1_A Protein SEC13 homolog; 75.9 41 0.0014 32.8 14.1 67 196-286 71-142 (316)
364 2pm7_B Protein transport prote 75.8 58 0.002 31.2 17.6 63 196-282 67-133 (297)
365 3o4h_A Acylamino-acid-releasin 75.4 36 0.0012 36.6 14.6 111 255-387 121-231 (582)
366 3iox_A AGI/II, PA; alpha helix 75.1 47 0.0016 34.8 14.0 19 592-610 78-96 (497)
367 3mov_A Lamin-B1; LMNB1, B-type 75.0 19 0.00064 29.0 8.9 8 603-610 74-81 (95)
368 1vcs_A Vesicle transport throu 74.5 15 0.00053 29.9 8.5 20 593-612 73-92 (102)
369 2jo8_A Serine/threonine-protei 74.5 9.5 0.00033 26.6 5.9 34 580-613 13-47 (51)
370 1xaw_A Occludin; coiled-coil, 74.4 16 0.00053 31.6 8.7 25 566-590 112-136 (140)
371 4fla_A Regulation of nuclear P 74.2 45 0.0015 29.3 12.1 18 580-597 124-141 (152)
372 1deq_A Fibrinogen (alpha chain 73.7 39 0.0013 34.0 12.6 37 574-610 117-157 (390)
373 3fpp_A Macrolide-specific effl 73.6 14 0.00049 37.1 10.1 23 594-616 128-150 (341)
374 3c7x_A Matrix metalloproteinas 73.5 46 0.0016 30.5 12.6 112 250-385 10-129 (196)
375 3ajw_A Flagellar FLIJ protein; 73.3 21 0.00072 31.0 9.9 36 530-565 21-56 (150)
376 3etw_A Adhesin A; antiparallel 72.8 21 0.00073 29.8 8.9 15 582-596 73-87 (119)
377 3gre_A Serine/threonine-protei 72.8 85 0.0029 31.8 16.9 109 255-386 181-295 (437)
378 3mmy_A MRNA export factor; mRN 72.7 72 0.0025 30.9 20.4 103 196-334 54-162 (368)
379 3k6s_A Integrin alpha-X; cell 72.6 1.6E+02 0.0054 34.8 20.7 190 185-386 333-545 (1095)
380 4dxa_B KREV interaction trappe 72.6 2.3 8E-05 42.8 3.8 70 35-105 127-221 (322)
381 3f3f_A Nucleoporin SEH1; struc 72.2 69 0.0024 30.5 21.1 151 196-383 71-249 (351)
382 3fpp_A Macrolide-specific effl 72.0 5.7 0.0002 40.1 6.6 24 589-612 130-153 (341)
383 1fxk_C Protein (prefoldin); ar 71.5 47 0.0016 28.2 12.2 25 591-615 106-130 (133)
384 2hz6_A Endoplasmic reticulum t 71.2 1.2 4E-05 45.9 1.1 66 192-286 6-75 (369)
385 3o4h_A Acylamino-acid-releasin 71.0 1.1E+02 0.0039 32.5 17.4 114 256-390 75-191 (582)
386 4ggc_A P55CDC, cell division c 70.9 73 0.0025 30.2 19.7 136 211-384 45-182 (318)
387 2zdi_C Prefoldin subunit alpha 70.4 23 0.00077 31.1 9.3 25 591-615 116-140 (151)
388 2xbg_A YCF48-like protein; pho 70.2 87 0.003 30.8 22.8 173 171-390 25-200 (327)
389 2lw9_A Unconventionnal myosin- 70.1 5.3 0.00018 27.3 3.7 12 574-585 10-21 (51)
390 1flg_A Protein (quinoprotein e 70.1 32 0.0011 37.5 12.5 121 251-388 64-200 (582)
391 1zxa_A CGMP-dependent protein 69.5 5.9 0.0002 29.5 4.3 31 531-561 21-51 (67)
392 3tul_A Cell invasion protein S 69.4 54 0.0018 28.2 10.8 43 566-608 72-121 (158)
393 3f3f_A Nucleoporin SEH1; struc 69.4 80 0.0027 30.1 22.4 107 195-334 22-145 (351)
394 1cii_A Colicin IA; bacteriocin 69.2 73 0.0025 32.8 13.4 12 575-586 403-414 (602)
395 1fxk_C Protein (prefoldin); ar 68.5 54 0.0019 27.8 12.0 33 519-551 6-38 (133)
396 3ghg_B Fibrinogen beta chain; 68.3 25 0.00084 36.7 10.1 22 519-540 86-107 (461)
397 1k32_A Tricorn protease; prote 68.1 67 0.0023 37.5 15.6 76 255-339 389-468 (1045)
398 3qh9_A Liprin-beta-2; coiled-c 68.1 39 0.0013 26.0 9.3 61 533-603 17-77 (81)
399 1fxk_A Prefoldin; archaeal pro 67.5 48 0.0016 26.8 10.8 10 533-542 20-29 (107)
400 2qag_B Septin-6, protein NEDD5 67.1 1.1 3.9E-05 46.9 0.0 26 540-565 346-371 (427)
401 1k32_A Tricorn protease; prote 66.9 1E+02 0.0034 36.0 16.8 143 211-389 317-467 (1045)
402 3a7o_A Autophagy protein 16; c 66.6 37 0.0013 25.2 7.9 26 536-561 19-44 (75)
403 3qne_A Seryl-tRNA synthetase, 66.5 15 0.00053 38.9 8.5 12 575-586 76-87 (485)
404 3k6s_A Integrin alpha-X; cell 66.5 97 0.0033 36.5 16.3 162 244-409 332-511 (1095)
405 3ter_A Mammalian stromal inter 66.4 61 0.0021 27.6 11.7 16 592-607 109-124 (136)
406 2zdi_C Prefoldin subunit alpha 66.3 39 0.0013 29.5 10.0 38 515-552 10-50 (151)
407 1u2m_A Histone-like protein HL 66.2 5.1 0.00017 34.9 4.1 23 537-559 32-54 (143)
408 3lp9_A LS-24; SEED albumin, pl 65.7 24 0.00083 33.3 9.1 62 306-384 129-202 (227)
409 4e61_A Protein BIM1; EB1-like 65.4 54 0.0019 26.7 9.6 39 527-565 10-48 (106)
410 2dq0_A Seryl-tRNA synthetase; 65.3 21 0.00072 37.6 9.4 7 604-610 93-99 (455)
411 1wle_A Seryl-tRNA synthetase; 65.3 50 0.0017 35.1 12.3 7 604-610 140-146 (501)
412 3onj_A T-snare VTI1; helix, HA 64.4 54 0.0018 26.3 9.8 25 558-582 36-60 (97)
413 1uii_A Geminin; human, DNA rep 64.3 25 0.00086 27.2 7.0 47 512-561 26-72 (83)
414 4d9s_A UVB-resistance protein 64.3 77 0.0026 32.5 13.6 19 349-367 338-356 (406)
415 2p9w_A MAL S 1 allergenic prot 64.0 97 0.0033 31.0 13.5 145 195-367 147-304 (334)
416 1gk4_A Vimentin; intermediate 63.8 50 0.0017 25.7 11.2 14 597-610 57-70 (84)
417 2al6_A Focal adhesion kinase 1 63.6 3.7 0.00013 42.3 3.1 68 38-106 131-224 (375)
418 2gop_A Trilobed protease; beta 63.4 1.1E+02 0.0038 29.6 17.8 101 271-389 151-257 (347)
419 4d9s_A UVB-resistance protein 63.3 90 0.0031 31.9 13.9 19 349-367 234-252 (406)
420 1wlq_A Geminin; coiled-coil; 2 63.1 35 0.0012 26.4 7.5 47 512-561 18-64 (83)
421 3vem_A Helicase protein MOM1; 62.8 63 0.0022 26.6 9.9 19 573-591 79-97 (115)
422 2qag_C Septin-7; cell cycle, c 62.8 1.5 5.3E-05 45.9 0.0 23 540-562 342-364 (418)
423 3viq_A SWI5-dependent recombin 62.5 42 0.0014 28.3 8.8 16 595-610 40-55 (122)
424 1lrz_A FEMA, factor essential 62.5 19 0.00067 37.5 8.5 75 549-633 254-337 (426)
425 3mtu_A Tropomyosin alpha-1 cha 62.2 25 0.00084 26.9 6.7 40 534-573 8-47 (75)
426 2ymu_A WD-40 repeat protein; u 62.2 1.6E+02 0.0054 30.9 18.2 105 255-387 396-502 (577)
427 1t2k_D Cyclic-AMP-dependent tr 62.1 18 0.00062 26.3 5.8 10 539-548 26-35 (61)
428 2mad_H Methylamine dehydrogena 62.0 1.4E+02 0.0047 30.1 15.5 140 190-345 219-364 (373)
429 3m9b_A Proteasome-associated A 61.8 7.8 0.00027 36.9 4.6 11 573-583 71-81 (251)
430 1go4_E MAD1 (mitotic arrest de 61.7 41 0.0014 27.1 8.2 30 522-551 13-42 (100)
431 3ghg_C Fibrinogen gamma chain; 60.8 40 0.0014 34.7 10.0 11 577-587 105-115 (411)
432 3uul_A Utrophin; spectrin repe 60.8 58 0.002 26.4 9.7 11 604-614 106-116 (118)
433 4a5s_A Dipeptidyl peptidase 4 60.5 79 0.0027 35.2 13.8 69 211-288 36-108 (740)
434 3frx_A Guanine nucleotide-bind 60.3 1.2E+02 0.0043 29.1 17.2 145 195-386 76-230 (319)
435 3plt_A Sphingolipid long chain 60.3 1.1E+02 0.0039 28.7 12.5 6 574-579 115-120 (234)
436 3ni0_A Bone marrow stromal ant 60.3 62 0.0021 25.6 12.4 19 596-614 69-87 (99)
437 2b5u_A Colicin E3; high resolu 60.1 58 0.002 34.0 10.9 7 360-366 195-201 (551)
438 1ykh_B RNA polymerase II holoe 59.7 45 0.0015 28.5 8.8 26 523-548 59-84 (132)
439 4ggc_A P55CDC, cell division c 59.7 1.2E+02 0.004 28.7 19.9 56 323-386 221-276 (318)
440 4dyl_A Tyrosine-protein kinase 59.6 51 0.0017 34.1 11.0 32 530-561 311-342 (406)
441 3gre_A Serine/threonine-protei 59.3 1.5E+02 0.0052 29.8 17.9 151 195-385 181-361 (437)
442 2c5k_T Syntaxin TLG1, T-snare 59.3 28 0.00095 27.9 6.9 24 538-561 39-62 (95)
443 1npe_A Nidogen, entactin; glyc 59.2 1.2E+02 0.004 28.4 22.3 156 189-388 82-243 (267)
444 4h5i_A Guanine nucleotide-exch 59.2 1.4E+02 0.0049 29.5 17.3 154 195-382 187-342 (365)
445 3hhm_B NISH2 P85alpha; PI3KCA, 59.1 92 0.0031 31.7 12.5 89 528-616 126-241 (373)
446 1npe_A Nidogen, entactin; glyc 58.8 1.2E+02 0.004 28.4 24.1 155 189-385 39-200 (267)
447 1ck7_A Protein (gelatinase A); 58.7 62 0.0021 35.5 11.8 155 189-384 447-616 (631)
448 3uux_B Mitochondrial division 58.4 62 0.0021 30.4 9.9 14 542-555 177-190 (242)
449 1xfd_A DIP, dipeptidyl aminope 58.4 70 0.0024 35.1 12.8 64 324-389 229-295 (723)
450 1fmh_A General control protein 57.3 20 0.0007 21.3 4.1 10 573-582 18-27 (33)
451 1yke_B RNA polymerase II holoe 57.2 44 0.0015 29.3 8.4 75 517-601 53-127 (151)
452 4fla_A Regulation of nuclear P 57.1 67 0.0023 28.2 9.6 83 507-589 65-147 (152)
453 1lwu_C Fibrinogen gamma chain; 57.1 21 0.00071 35.7 7.0 50 516-565 7-56 (323)
454 2oiz_A Aromatic amine dehydrog 56.9 1.6E+02 0.0054 29.3 21.9 212 195-450 61-335 (361)
455 2gop_A Trilobed protease; beta 56.8 1.4E+02 0.0049 28.7 14.6 171 184-389 14-213 (347)
456 2v66_B Nuclear distribution pr 56.6 83 0.0028 25.9 14.7 96 512-607 12-107 (111)
457 3s84_A Apolipoprotein A-IV; fo 56.0 1.5E+02 0.0051 28.7 15.6 102 512-613 101-224 (273)
458 3azd_A Short alpha-tropomyosin 55.6 5.8 0.0002 25.9 1.8 31 589-619 6-36 (37)
459 3cl3_D NF-kappa-B essential mo 55.5 35 0.0012 28.6 6.9 102 509-615 25-130 (130)
460 3a2a_A Voltage-gated hydrogen 55.5 34 0.0012 24.0 5.7 44 545-588 7-50 (58)
461 3haj_A Human pacsin2 F-BAR; pa 55.4 74 0.0025 33.7 11.7 101 509-609 131-239 (486)
462 1ses_A Seryl-tRNA synthetase; 55.4 48 0.0016 34.5 9.9 94 516-613 4-97 (421)
463 1gs9_A Apolipoprotein E, APOE4 55.0 58 0.002 29.0 9.0 93 512-604 57-160 (165)
464 2p4o_A Hypothetical protein; p 54.6 1.5E+02 0.0052 28.4 19.6 187 189-431 75-275 (306)
465 3b7f_A Glycosyl hydrolase, BNR 54.6 1.8E+02 0.0061 29.2 19.4 206 195-456 22-269 (394)
466 2wt7_A Proto-oncogene protein 54.1 35 0.0012 25.0 6.1 41 520-560 22-62 (63)
467 3qne_A Seryl-tRNA synthetase, 54.0 25 0.00086 37.2 7.4 67 550-616 34-100 (485)
468 1y4c_A Maltose binding protein 53.8 1.2E+02 0.004 32.2 13.0 95 520-615 386-490 (494)
469 2wvr_A Geminin; DNA replicatio 53.6 42 0.0014 30.6 7.6 70 524-593 104-173 (209)
470 3sjl_D Methylamine dehydrogena 53.6 91 0.0031 31.9 11.6 126 255-397 237-377 (386)
471 3frx_A Guanine nucleotide-bind 53.4 1.6E+02 0.0055 28.3 17.3 145 255-450 76-228 (319)
472 3htk_A Structural maintenance 53.4 59 0.002 23.2 7.9 55 533-587 3-57 (60)
473 2fp8_A Strictosidine synthase; 52.8 1.5E+02 0.0053 28.5 13.1 158 255-449 29-216 (322)
474 3hxj_A Pyrrolo-quinoline quino 52.7 1.6E+02 0.0055 28.1 16.5 178 190-431 102-280 (330)
475 3r2p_A Apolipoprotein A-I; amp 52.7 49 0.0017 30.0 8.4 102 502-613 44-152 (185)
476 3he5_A Synzip1; heterodimeric 52.1 46 0.0016 21.6 6.3 45 537-588 5-49 (49)
477 1hjb_A Ccaat/enhancer binding 52.0 26 0.00088 27.6 5.4 46 520-565 35-80 (87)
478 2a01_A Apolipoprotein A-I; fou 51.9 56 0.0019 31.1 9.0 99 512-610 101-214 (243)
479 3a2a_A Voltage-gated hydrogen 51.8 45 0.0015 23.4 5.8 45 523-567 6-50 (58)
480 3c75_H MADH, methylamine dehyd 51.7 74 0.0025 33.1 10.7 146 195-363 84-244 (426)
481 1gen_A Gelatinase A; hydrolase 51.7 1.5E+02 0.0052 27.5 18.0 172 234-449 15-202 (218)
482 3trt_A Vimentin; cytoskeleton, 51.7 76 0.0026 24.0 8.8 67 525-593 6-73 (77)
483 1t6f_A Geminin; coiled-coil, c 51.6 41 0.0014 21.3 5.0 33 530-562 2-34 (37)
484 3kci_A Probable E3 ubiquitin-p 51.6 1.2E+02 0.0042 30.6 12.4 154 187-365 62-238 (389)
485 1hxn_A Hemopexin, HPX; heme, b 51.6 76 0.0026 29.6 9.7 149 190-381 22-195 (219)
486 2xe4_A Oligopeptidase B; hydro 51.2 2.9E+02 0.01 30.7 17.4 158 195-389 282-464 (751)
487 3dw8_B Serine/threonine-protei 51.1 2E+02 0.0069 28.7 20.1 194 195-450 188-447 (447)
488 2ve7_A Kinetochore protein HEC 50.9 30 0.001 34.5 7.1 67 517-586 167-233 (315)
489 3kqg_A Langerin, C-type lectin 50.7 14 0.00048 33.3 4.4 41 574-614 3-43 (182)
490 2mad_H Methylamine dehydrogena 50.6 2.1E+02 0.0071 28.7 24.2 212 195-450 77-351 (373)
491 1wle_A Seryl-tRNA synthetase; 50.3 70 0.0024 34.0 10.2 69 514-582 70-149 (501)
492 2efk_A CDC42-interacting prote 50.3 1.8E+02 0.0062 28.0 14.9 106 511-616 99-220 (301)
493 1lrz_A FEMA, factor essential 50.2 33 0.0011 35.7 7.8 75 561-635 245-339 (426)
494 1zxa_A CGMP-dependent protein 50.1 17 0.00057 27.1 3.7 41 536-576 12-52 (67)
495 3edu_A Beta-I spectrin, spectr 50.1 64 0.0022 29.7 9.1 105 513-617 91-210 (218)
496 2oto_A M protein; helical coil 50.0 1.3E+02 0.0044 26.2 14.8 96 519-614 27-130 (155)
497 3vmx_A Voltage-gated hydrogen 50.0 59 0.002 22.3 6.3 42 547-588 2-43 (48)
498 1gd2_E Transcription factor PA 49.9 79 0.0027 23.7 7.6 60 524-583 10-70 (70)
499 2xzr_A Immunoglobulin-binding 49.3 95 0.0033 24.5 9.0 60 528-587 48-107 (114)
500 1n7d_A LDL receptor, low-densi 49.2 3.1E+02 0.011 30.3 17.5 233 182-478 402-643 (699)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=328.55 Aligned_cols=260 Identities=17% Similarity=0.286 Sum_probs=225.8
Q ss_pred Cccccccc----eEEecccCCCCCCCCcceeEEEECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCC
Q 006645 164 LGSVVVYD----QWIAPPISGQRPKARYEHGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPS 239 (637)
Q Consensus 164 ~~~~~~~~----~W~~~~~~g~~p~~R~~~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~ 239 (637)
.+.++.|| +|..++. +|.+|.+|++++++++|||+||.. ...++++++||+.+++|..+.+
T Consensus 23 ~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~~~~~W~~~~~----------- 87 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRC---PFEKRRDAACVFWDNVVYILGGSQ-LFPIKRMDCYNVVKDSWYSKLG----------- 87 (306)
T ss_dssp TTSEEEEETTTTEEEECCC---CSCCCBSCEEEEETTEEEEECCBS-SSBCCEEEEEETTTTEEEEEEC-----------
T ss_pred CceEEEecCCCCCEecCCC---CCcccceeEEEEECCEEEEEeCCC-CCCcceEEEEeCCCCeEEECCC-----------
Confidence 34556664 9999874 899999999999999999999977 6778999999999999999854
Q ss_pred CCCCCCcccceEEEeCCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCC
Q 006645 240 PALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKR 319 (637)
Q Consensus 240 ~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~ 319 (637)
+|.+|.+|+++.++++|||+||.+.....++++++||+.+++|+.+++ +|.+|.+|+++.++++||+|||.+...
T Consensus 88 --~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~iyv~GG~~~~~ 162 (306)
T 3ii7_A 88 --PPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPS---MLTQRCSHGMVEANGLIYVCGGSLGNN 162 (306)
T ss_dssp --CSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECC---CSSCCBSCEEEEETTEEEEECCEESCT
T ss_pred --CCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCC---CcCCcceeEEEEECCEEEEECCCCCCC
Confidence 478999999999999999999997555678999999999999999965 899999999999999999999986654
Q ss_pred C---CCCceEEEECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecccCCCCC
Q 006645 320 S---LLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPTQQGEIP 396 (637)
Q Consensus 320 ~---~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~~~~~~p 396 (637)
. .++++++||+.+++|+.+.. +|.+|..|+++++ +++|||+||.+....++++++||+.+++|+.+. .+|
T Consensus 163 ~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~p 235 (306)
T 3ii7_A 163 VSGRVLNSCEVYDPATETWTELCP---MIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVS---PMP 235 (306)
T ss_dssp TTCEECCCEEEEETTTTEEEEECC---CSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECC---CCS
T ss_pred CcccccceEEEeCCCCCeEEECCC---ccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECC---CCC
Confidence 3 28999999999999999974 5889999999998 677999999887777899999999999999985 788
Q ss_pred CCCcccEEEEECCccccceeeeeeccCCCCEEEEEcCCCCC-CcccEEEEeCCCCccccc-ccCCCCCCCCcc
Q 006645 397 TPRAGHAGVTIGENWFLGLSLVVSSYSGEDVIVAFGGYNGR-YNNEVHVLKPSHKSTLSS-KMIETPVPDSVS 467 (637)
Q Consensus 397 ~~R~~hs~~~~~~~~yiG~s~~~~~~~g~~~l~v~GG~~~~-~~~~v~~~d~~~~~~~~~-~~~~~~~~~~~~ 467 (637)
.+|..|+++++++ +|||+||+++. ..+++++||+.++.|... .++..+......
T Consensus 236 ~~r~~~~~~~~~~-----------------~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~ 291 (306)
T 3ii7_A 236 WKGVTVKCAAVGS-----------------IVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTSCLI 291 (306)
T ss_dssp CCBSCCEEEEETT-----------------EEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECCSCTTCEE
T ss_pred CCccceeEEEECC-----------------EEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcccccceeEEE
Confidence 9999999999866 89999999875 789999999999977654 444444444433
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=325.98 Aligned_cols=248 Identities=18% Similarity=0.307 Sum_probs=219.7
Q ss_pred ccccccc----eEEecccCCCCCCCCcceeEEEECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCC
Q 006645 165 GSVVVYD----QWIAPPISGQRPKARYEHGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSP 240 (637)
Q Consensus 165 ~~~~~~~----~W~~~~~~g~~p~~R~~~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~ 240 (637)
+.+..|| +|..++ .+|.+|.+|++++++++|||+||..+...++++++||+.+++|+.+++
T Consensus 30 ~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~------------ 94 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVA---ELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN------------ 94 (302)
T ss_dssp CCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECC------------
T ss_pred CcEEEEcCcCCcEeEcc---cCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCC------------
Confidence 4455554 999986 489999999999999999999998877788999999999999999854
Q ss_pred CCCCCcccceEEEeCCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCC-
Q 006645 241 ALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKR- 319 (637)
Q Consensus 241 ~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~- 319 (637)
+|.+|.+|+++.++++|||+||.... ..++++++||+.+++|+.+++ +|.+|.+|++++++++||+|||.+...
T Consensus 95 -~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 169 (302)
T 2xn4_A 95 -MRDRRSTLGAAVLNGLLYAVGGFDGS-TGLSSVEAYNIKSNEWFHVAP---MNTRRSSVGVGVVGGLLYAVGGYDVASR 169 (302)
T ss_dssp -CSSCCBSCEEEEETTEEEEEEEECSS-CEEEEEEEEETTTTEEEEECC---CSSCCBSCEEEEETTEEEEECCEETTTT
T ss_pred -CCccccceEEEEECCEEEEEcCCCCC-ccCceEEEEeCCCCeEeecCC---CCCcccCceEEEECCEEEEEeCCCCCCC
Confidence 47899999999999999999998764 568899999999999999976 789999999999999999999986654
Q ss_pred CCCCceEEEECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecccCCCCCCCC
Q 006645 320 SLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPTQQGEIPTPR 399 (637)
Q Consensus 320 ~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~~~~~~p~~R 399 (637)
..++++++||+.+++|+.+.. +|.+|..|+++++ +++|||+||.++....+++++||+.+++|+.+. .+|.+|
T Consensus 170 ~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~~~~r 242 (302)
T 2xn4_A 170 QCLSTVECYNATTNEWTYIAE---MSTRRSGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVA---DMNMCR 242 (302)
T ss_dssp EECCCEEEEETTTTEEEEECC---CSSCCBSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTEEEEEC---CCSSCC
T ss_pred ccccEEEEEeCCCCcEEECCC---CccccccccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCCEeeCC---CCCCcc
Confidence 357899999999999999964 5889999999988 678999999887777899999999999999986 678899
Q ss_pred cccEEEEECCccccceeeeeeccCCCCEEEEEcCCCCC-CcccEEEEeCCCCcccccc
Q 006645 400 AGHAGVTIGENWFLGLSLVVSSYSGEDVIVAFGGYNGR-YNNEVHVLKPSHKSTLSSK 456 (637)
Q Consensus 400 ~~hs~~~~~~~~yiG~s~~~~~~~g~~~l~v~GG~~~~-~~~~v~~~d~~~~~~~~~~ 456 (637)
..|+++++++ +||++||.++. ..+++++||+.++.|....
T Consensus 243 ~~~~~~~~~~-----------------~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 243 RNAGVCAVNG-----------------LLYVVGGDDGSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp BSCEEEEETT-----------------EEEEECCBCSSSBCCCEEEEETTTTEEEECS
T ss_pred ccCeEEEECC-----------------EEEEECCcCCCcccccEEEEcCCCCeEEECC
Confidence 9999998865 89999998765 6899999999999887643
No 3
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=4e-38 Score=326.05 Aligned_cols=247 Identities=19% Similarity=0.277 Sum_probs=219.5
Q ss_pred Cccccccc----eEEecccCCCCCCCCcceeEEEECCEEEEEccc----CCCcccCcEEEEEccCCeEEEeeecccccCC
Q 006645 164 LGSVVVYD----QWIAPPISGQRPKARYEHGAAVVQDKMYIYGGN----HNGRYLSDMHILDLRSWAWSKIQAKAVAEST 235 (637)
Q Consensus 164 ~~~~~~~~----~W~~~~~~g~~p~~R~~~a~~~~~~~lyv~GG~----~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~ 235 (637)
++.+..|| +|..++. +|.+|.+|++++++++|||+||. .+...++++++||+.+++|+.+++
T Consensus 38 ~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~------- 107 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLAD---LQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAP------- 107 (308)
T ss_dssp CCCEEEEETTTTEEEECCC---CSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCC-------
T ss_pred cceEEEEcCCCCeEeECCC---CCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCC-------
Confidence 44566664 9999964 89999999999999999999997 556778999999999999999854
Q ss_pred CCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCC
Q 006645 236 ESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGE 315 (637)
Q Consensus 236 ~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~ 315 (637)
+|.+|.+|+++.++++|||+||.... ...+++++||+.+++|+.+++ +|.+|.+|++++++++||+|||.
T Consensus 108 ------~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~iyv~GG~ 177 (308)
T 1zgk_A 108 ------MSVPRNRIGVGVIDGHIYAVGGSHGC-IHHNSVERYEPERDEWHLVAP---MLTRRIGVGVAVLNRLLYAVGGF 177 (308)
T ss_dssp ------CSSCCBTCEEEEETTEEEEECCEETT-EECCCEEEEETTTTEEEECCC---CSSCCBSCEEEEETTEEEEECCB
T ss_pred ------CCcCccccEEEEECCEEEEEcCCCCC-cccccEEEECCCCCeEeECCC---CCccccceEEEEECCEEEEEeCC
Confidence 47899999999999999999998764 467899999999999999976 89999999999999999999999
Q ss_pred CCCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecccCCCC
Q 006645 316 DAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPTQQGEI 395 (637)
Q Consensus 316 ~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~~~~~~ 395 (637)
+.... ++++++||+.+++|+.+.. +|.+|..|+++++ +++||||||.+....++++++||+.+++|+.+. .+
T Consensus 178 ~~~~~-~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~ 249 (308)
T 1zgk_A 178 DGTNR-LNSAECYYPERNEWRMITA---MNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETWTFVA---PM 249 (308)
T ss_dssp CSSCB-CCCEEEEETTTTEEEECCC---CSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEECC---CC
T ss_pred CCCCc-CceEEEEeCCCCeEeeCCC---CCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcEEECC---CC
Confidence 76653 8999999999999999964 5889999999988 678999999987777899999999999999986 78
Q ss_pred CCCCcccEEEEECCccccceeeeeeccCCCCEEEEEcCCCCC-CcccEEEEeCCCCccccc
Q 006645 396 PTPRAGHAGVTIGENWFLGLSLVVSSYSGEDVIVAFGGYNGR-YNNEVHVLKPSHKSTLSS 455 (637)
Q Consensus 396 p~~R~~hs~~~~~~~~yiG~s~~~~~~~g~~~l~v~GG~~~~-~~~~v~~~d~~~~~~~~~ 455 (637)
|.+|..|+++++++ +||||||+++. ..+++++||+.++.|...
T Consensus 250 p~~r~~~~~~~~~~-----------------~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 293 (308)
T 1zgk_A 250 KHRRSALGITVHQG-----------------RIYVLGGYDGHTFLDSVECYDPDTDTWSEV 293 (308)
T ss_dssp SSCCBSCEEEEETT-----------------EEEEECCBCSSCBCCEEEEEETTTTEEEEE
T ss_pred CCCccceEEEEECC-----------------EEEEEcCcCCCcccceEEEEcCCCCEEeec
Confidence 89999999999865 89999998875 689999999999977654
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=319.23 Aligned_cols=247 Identities=19% Similarity=0.347 Sum_probs=219.5
Q ss_pred Cccccccc----eEEecccCCCCCCCCcceeEEEECCEEEEEcccCCCcccCcEEEEEccCCe---EEEeeecccccCCC
Q 006645 164 LGSVVVYD----QWIAPPISGQRPKARYEHGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSWA---WSKIQAKAVAESTE 236 (637)
Q Consensus 164 ~~~~~~~~----~W~~~~~~g~~p~~R~~~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~---W~~~~~~~~~~~~~ 236 (637)
.+.+..|| +|..++. +|.+|.+|++++++++|||+||..+...++++++||+.+++ |+.+.+
T Consensus 30 ~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~-------- 98 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPS---ITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAP-------- 98 (301)
T ss_dssp CCCEEEEETTTTEEEECCC---CSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECC--------
T ss_pred eeEEEEEcCCCCeEEeCCC---CChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCC--------
Confidence 34555564 9999884 88899999999999999999998877888999999999999 999844
Q ss_pred CCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCC
Q 006645 237 SPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGED 316 (637)
Q Consensus 237 ~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~ 316 (637)
+|.+|.+|+++.++++|||+||.... ..++++++||+.+++|+.+++ +|.+|.+|++++++++||++||.+
T Consensus 99 -----~p~~r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~iyv~GG~~ 169 (301)
T 2vpj_A 99 -----MNVRRGLAGATTLGDMIYVSGGFDGS-RRHTSMERYDPNIDQWSMLGD---MQTAREGAGLVVASGVIYCLGGYD 169 (301)
T ss_dssp -----CSSCCBSCEEEEETTEEEEECCBCSS-CBCCEEEEEETTTTEEEEEEE---CSSCCBSCEEEEETTEEEEECCBC
T ss_pred -----CCCCccceeEEEECCEEEEEcccCCC-cccceEEEEcCCCCeEEECCC---CCCCcccceEEEECCEEEEECCCC
Confidence 47899999999999999999999765 458899999999999999976 789999999999999999999987
Q ss_pred CCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecccCCCCC
Q 006645 317 AKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPTQQGEIP 396 (637)
Q Consensus 317 ~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~~~~~~p 396 (637)
... .++++++||+.+++|+.+.. +|.+|..|+++++ +++|||+||.+....++++++||+.+++|+.+. .+|
T Consensus 170 ~~~-~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~p 241 (301)
T 2vpj_A 170 GLN-ILNSVEKYDPHTGHWTNVTP---MATKRSGAGVALL-NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVT---SMT 241 (301)
T ss_dssp SSC-BCCCEEEEETTTTEEEEECC---CSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEEEC---CCS
T ss_pred CCc-ccceEEEEeCCCCcEEeCCC---CCcccccceEEEE-CCEEEEEeCCCCCcccceEEEEeCCCCcEEECC---CCC
Confidence 654 58999999999999999963 5899999999998 678999999887777899999999999999985 688
Q ss_pred CCCcccEEEEECCccccceeeeeeccCCCCEEEEEcCCCCC-CcccEEEEeCCCCccccc
Q 006645 397 TPRAGHAGVTIGENWFLGLSLVVSSYSGEDVIVAFGGYNGR-YNNEVHVLKPSHKSTLSS 455 (637)
Q Consensus 397 ~~R~~hs~~~~~~~~yiG~s~~~~~~~g~~~l~v~GG~~~~-~~~~v~~~d~~~~~~~~~ 455 (637)
.+|..|+++++++ +||++||+++. ..+++++||+.++.|...
T Consensus 242 ~~r~~~~~~~~~~-----------------~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 284 (301)
T 2vpj_A 242 TPRCYVGATVLRG-----------------RLYAIAGYDGNSLLSSIECYDPIIDSWEVV 284 (301)
T ss_dssp SCCBSCEEEEETT-----------------EEEEECCBCSSSBEEEEEEEETTTTEEEEE
T ss_pred CcccceeEEEECC-----------------EEEEEcCcCCCcccccEEEEcCCCCeEEEc
Confidence 9999999999865 89999998775 578999999999977654
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=4.8e-38 Score=326.39 Aligned_cols=249 Identities=17% Similarity=0.275 Sum_probs=214.7
Q ss_pred ccccccc----eEEecccCCCCCCCCcceeEEEECCEEEEEcccC------CCcccCcEEEEEccCCeEEEeeecccccC
Q 006645 165 GSVVVYD----QWIAPPISGQRPKARYEHGAAVVQDKMYIYGGNH------NGRYLSDMHILDLRSWAWSKIQAKAVAES 234 (637)
Q Consensus 165 ~~~~~~~----~W~~~~~~g~~p~~R~~~a~~~~~~~lyv~GG~~------~~~~~~~v~~yd~~t~~W~~~~~~~~~~~ 234 (637)
..+..|| +|...+ .+.|.+|.+|++++++++|||+||.. .....+++++||+.+++|+.+++
T Consensus 13 ~~~~~yd~~~~~W~~~~--~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~------ 84 (315)
T 4asc_A 13 EGAVAYDPAANECYCAS--LSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP------ 84 (315)
T ss_dssp TEEEEEETTTTEEEEEE--CCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC------
T ss_pred CceEEECCCCCeEecCC--CCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC------
Confidence 4555664 898732 23477999999999999999999952 23445679999999999998854
Q ss_pred CCCCCCCCCCCcccceEEEeCCEEEEEEccCC--CCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEE
Q 006645 235 TESPSPALLTPCAGHSLIPWENKLLSIAGHTK--DPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIF 312 (637)
Q Consensus 235 ~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~--~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~ 312 (637)
+|.+|.+|+++.++++|||+||... .....+++++||+.+++|+.+++ +|.+|.+|++++++++||+|
T Consensus 85 -------~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~iyv~ 154 (315)
T 4asc_A 85 -------LPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDP---LPYVVYGHTVLSHMDLVYVI 154 (315)
T ss_dssp -------BSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCC---CSSCCBSCEEEEETTEEEEE
T ss_pred -------CCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCC---CCCcccceeEEEECCEEEEE
Confidence 4789999999999999999999863 34678999999999999999976 89999999999999999999
Q ss_pred eCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecccC
Q 006645 313 GGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPTQQ 392 (637)
Q Consensus 313 GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~~~ 392 (637)
||.+.....++++++||+.+++|+.+++ +|.+|..|+++++ +++|||+||.+....++++++||+.+++|+.+.
T Consensus 155 GG~~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-- 228 (315)
T 4asc_A 155 GGKGSDRKCLNKMCVYDPKKFEWKELAP---MQTARSLFGATVH-DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFE-- 228 (315)
T ss_dssp CCBCTTSCBCCCEEEEETTTTEEEECCC---CSSCCBSCEEEEE-TTEEEEEEEECSSSEEEEEEEEETTTTEEEEEC--
T ss_pred eCCCCCCcccceEEEEeCCCCeEEECCC---CCCchhceEEEEE-CCEEEEEeccCCCCccceEEEEECCCCeEEECC--
Confidence 9996656678999999999999999874 4889999999998 678999999887777899999999999999986
Q ss_pred CCCCCCCcccEEEEECCccccceeeeeeccCCCCEEEEEcCCCC----------CCcccEEEEeCCCCccccc
Q 006645 393 GEIPTPRAGHAGVTIGENWFLGLSLVVSSYSGEDVIVAFGGYNG----------RYNNEVHVLKPSHKSTLSS 455 (637)
Q Consensus 393 ~~~p~~R~~hs~~~~~~~~yiG~s~~~~~~~g~~~l~v~GG~~~----------~~~~~v~~~d~~~~~~~~~ 455 (637)
.+|.+|..|+++++++ +||++||.++ ...+++++||+.++.|...
T Consensus 229 -~~p~~r~~~~~~~~~~-----------------~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 229 -AFPQERSSLSLVSLVG-----------------TLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp -CCSSCCBSCEEEEETT-----------------EEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred -CCCCcccceeEEEECC-----------------EEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 6889999999999866 8999999853 2578999999999988766
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=2.7e-37 Score=321.15 Aligned_cols=249 Identities=21% Similarity=0.342 Sum_probs=213.6
Q ss_pred ccccccc----eEEecccCCCCCCCCcceeEEEECCEEEEEcccCC------CcccCcEEEEEccCCeEEEeeecccccC
Q 006645 165 GSVVVYD----QWIAPPISGQRPKARYEHGAAVVQDKMYIYGGNHN------GRYLSDMHILDLRSWAWSKIQAKAVAES 234 (637)
Q Consensus 165 ~~~~~~~----~W~~~~~~g~~p~~R~~~a~~~~~~~lyv~GG~~~------~~~~~~v~~yd~~t~~W~~~~~~~~~~~ 234 (637)
..+..|| +|...+. +.|.+|.+|++++++++|||+||... ....+++++||+.+++|..+++
T Consensus 24 ~~~~~yd~~~~~W~~~~~--~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~------ 95 (318)
T 2woz_A 24 TAAVAYDPMENECYLTAL--AEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP------ 95 (318)
T ss_dssp SEEEEEETTTTEEEEEEE--CTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC------
T ss_pred cceEEECCCCCceecccC--CccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC------
Confidence 3455664 9998442 34678999999999999999999521 1234459999999999999854
Q ss_pred CCCCCCCCCCCcccceEEEeCCEEEEEEccCC-CCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEe
Q 006645 235 TESPSPALLTPCAGHSLIPWENKLLSIAGHTK-DPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFG 313 (637)
Q Consensus 235 ~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~-~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~G 313 (637)
+|.+|.+|+++.++++|||+||... ....++++++||+.+++|+.+++ +|.+|.+|++++++++||+||
T Consensus 96 -------~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~iyv~G 165 (318)
T 2woz_A 96 -------LPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKN---LPIKVYGHNVISHNGMIYCLG 165 (318)
T ss_dssp -------BSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECC---CSSCEESCEEEEETTEEEEEC
T ss_pred -------CCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCC---CCCcccccEEEEECCEEEEEc
Confidence 4789999999999999999999874 34678999999999999999975 899999999999999999999
Q ss_pred CCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecccCC
Q 006645 314 GEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPTQQG 393 (637)
Q Consensus 314 G~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~~~~ 393 (637)
|.+.....++++++||+.+++|+.++. +|.+|..|+++++ +++|||+||.+....++++++||+.+++|+.+.
T Consensus 166 G~~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--- 238 (318)
T 2woz_A 166 GKTDDKKCTNRVFIYNPKKGDWKDLAP---MKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMT--- 238 (318)
T ss_dssp CEESSSCBCCCEEEEETTTTEEEEECC---CSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCCEEECC---
T ss_pred CCCCCCCccceEEEEcCCCCEEEECCC---CCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCeEEECC---
Confidence 986665678999999999999999964 5899999999987 678999999887777889999999999999985
Q ss_pred CCCCCCcccEEEEECCccccceeeeeeccCCCCEEEEEcCCCC----------CCcccEEEEeCCCCccccc
Q 006645 394 EIPTPRAGHAGVTIGENWFLGLSLVVSSYSGEDVIVAFGGYNG----------RYNNEVHVLKPSHKSTLSS 455 (637)
Q Consensus 394 ~~p~~R~~hs~~~~~~~~yiG~s~~~~~~~g~~~l~v~GG~~~----------~~~~~v~~~d~~~~~~~~~ 455 (637)
.+|.+|..|+++++++ +||++||.++ ...+++|+||+.++.|...
T Consensus 239 ~~p~~r~~~~~~~~~~-----------------~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 239 EFPQERSSISLVSLAG-----------------SLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp CCSSCCBSCEEEEETT-----------------EEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred CCCCcccceEEEEECC-----------------EEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 6889999999999866 8999999864 2479999999999988776
No 7
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=5.7e-36 Score=309.84 Aligned_cols=235 Identities=20% Similarity=0.249 Sum_probs=198.4
Q ss_pred CCCCCCCcceeEEEECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEE
Q 006645 180 GQRPKARYEHGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLL 259 (637)
Q Consensus 180 g~~p~~R~~~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~ly 259 (637)
++.|.+|..|+++.++++||+|||. .+..++++++||+.+++|..+.. +|.+|.+|+++.++++||
T Consensus 9 ~~~~~~~~~~~~~~~~~~i~v~GG~-~~~~~~~~~~~d~~~~~W~~~~~-------------~p~~r~~~~~~~~~~~ly 74 (308)
T 1zgk_A 9 HSSGLVPRGSHAPKVGRLIYTAGGY-FRQSLSYLEAYNPSNGTWLRLAD-------------LQVPRSGLAGCVVGGLLY 74 (308)
T ss_dssp ------------CCCCCCEEEECCB-SSSBCCCEEEEETTTTEEEECCC-------------CSSCCBSCEEEEETTEEE
T ss_pred ccCCeeeCCccccCCCCEEEEEeCc-CCCCcceEEEEcCCCCeEeECCC-------------CCcccccceEEEECCEEE
Confidence 3568899999999999999999998 56778999999999999999844 478999999999999999
Q ss_pred EEEccC---CCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceE
Q 006645 260 SIAGHT---KDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWD 336 (637)
Q Consensus 260 v~GG~~---~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~ 336 (637)
|+||.. ......+++++||+.+++|..+++ +|.+|.+|++++++++||++||.+... .++++++||+.+++|+
T Consensus 75 v~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~ 150 (308)
T 1zgk_A 75 AVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAP---MSVPRNRIGVGVIDGHIYAVGGSHGCI-HHNSVERYEPERDEWH 150 (308)
T ss_dssp EECCEEEETTEEEECCCEEEEETTTTEEEECCC---CSSCCBTCEEEEETTEEEEECCEETTE-ECCCEEEEETTTTEEE
T ss_pred EECCCcCCCCCCeecceEEEECCCCCeEeECCC---CCcCccccEEEEECCEEEEEcCCCCCc-ccccEEEECCCCCeEe
Confidence 999984 223467899999999999999976 889999999999999999999987654 5799999999999999
Q ss_pred EecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecccCCCCCCCCcccEEEEECCcccccee
Q 006645 337 EIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPTQQGEIPTPRAGHAGVTIGENWFLGLS 416 (637)
Q Consensus 337 ~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~~~~~~p~~R~~hs~~~~~~~~yiG~s 416 (637)
.+.. +|.+|..|+++++ +++||||||.+....++++++||+.+++|+.+. .+|.+|..|+++++++
T Consensus 151 ~~~~---~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~------- 216 (308)
T 1zgk_A 151 LVAP---MLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERNEWRMIT---AMNTIRSGAGVCVLHN------- 216 (308)
T ss_dssp ECCC---CSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETT-------
T ss_pred ECCC---CCccccceEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCC---CCCCccccceEEEECC-------
Confidence 9974 5899999999998 678999999887777899999999999999985 6889999999999865
Q ss_pred eeeeccCCCCEEEEEcCCCCC-CcccEEEEeCCCCcccccc
Q 006645 417 LVVSSYSGEDVIVAFGGYNGR-YNNEVHVLKPSHKSTLSSK 456 (637)
Q Consensus 417 ~~~~~~~g~~~l~v~GG~~~~-~~~~v~~~d~~~~~~~~~~ 456 (637)
+||||||.++. ..+++++||+.++.|....
T Consensus 217 ----------~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 247 (308)
T 1zgk_A 217 ----------CIYAAGGYDGQDQLNSVERYDVETETWTFVA 247 (308)
T ss_dssp ----------EEEEECCBCSSSBCCCEEEEETTTTEEEECC
T ss_pred ----------EEEEEeCCCCCCccceEEEEeCCCCcEEECC
Confidence 89999999765 6899999999999887654
No 8
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=4.2e-35 Score=309.53 Aligned_cols=246 Identities=18% Similarity=0.302 Sum_probs=199.5
Q ss_pred ceEEecccCCCCC-CCCcceeEEEECCEEEEEccc-C----CCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCC
Q 006645 171 DQWIAPPISGQRP-KARYEHGAAVVQDKMYIYGGN-H----NGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLT 244 (637)
Q Consensus 171 ~~W~~~~~~g~~p-~~R~~~a~~~~~~~lyv~GG~-~----~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~ 244 (637)
++|..+++ +| .+|.+|++++++++||||||. . ....++++++||+.+++|+.++++. |.
T Consensus 43 ~~W~~~~~---~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~------------p~ 107 (357)
T 2uvk_A 43 KKWTALAA---FPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA------------PM 107 (357)
T ss_dssp CCEEECCC---CTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC------------SS
T ss_pred CCeeECCC---CCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC------------Cc
Confidence 58999875 78 899999999999999999997 3 2366899999999999999997651 68
Q ss_pred CcccceEEEeCCEEEEEEccCCCC---------------------------------CcceeEEEEECCCCceEeeccCC
Q 006645 245 PCAGHSLIPWENKLLSIAGHTKDP---------------------------------SEIIQVKVFDLQTCSWSTLKTYG 291 (637)
Q Consensus 245 ~r~~hs~v~~~~~lyv~GG~~~~~---------------------------------~~~~~v~~yd~~t~~W~~~~~~g 291 (637)
+|.+|+++.++++||||||.+... ..++++++||+.+++|+.+.+
T Consensus 108 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~-- 185 (357)
T 2uvk_A 108 GMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGE-- 185 (357)
T ss_dssp CCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEE--
T ss_pred ccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCC--
Confidence 999999999999999999986431 245899999999999999976
Q ss_pred CCCCCC-CceEEEEECCEEEEEeCCCCCCCCCCceEEEEC--CCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCC
Q 006645 292 KPPVSR-GGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDL--ETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGS 368 (637)
Q Consensus 292 ~~p~~r-~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~--~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~ 368 (637)
+|.+| .+|++++++++||||||.+..+..++++++||+ .+++|+.+... ..|.+|.+|+++++ +++||||||.+
T Consensus 186 -~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~-~~~~~~~~~~~~~~-~~~iyv~GG~~ 262 (357)
T 2uvk_A 186 -SPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPV-SSPDGVAGGFAGIS-NDSLIFAGGAG 262 (357)
T ss_dssp -CSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCS-STTTCCBSCEEEEE-TTEEEEECCEE
T ss_pred -CCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCC-CCCcccccceEEEE-CCEEEEEcCcc
Confidence 67654 459999999999999998766556889999987 89999999755 23455678888887 67899999954
Q ss_pred C-----------------CCCcCcEEEEECCCCeeEecccCCCCCCCCcccEEEEECCccccceeeeeeccCCCCEEEEE
Q 006645 369 H-----------------AACFNDLHVLDLQTMEWSRPTQQGEIPTPRAGHAGVTIGENWFLGLSLVVSSYSGEDVIVAF 431 (637)
Q Consensus 369 ~-----------------~~~~~dl~~~d~~t~~W~~l~~~~~~p~~R~~hs~~~~~~~~yiG~s~~~~~~~g~~~l~v~ 431 (637)
. ...++++++||+.+++|+.+. .+|.+|..|+++++++ +||||
T Consensus 263 ~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~-----------------~i~v~ 322 (357)
T 2uvk_A 263 FKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSG---ELSQGRAYGVSLPWNN-----------------SLLII 322 (357)
T ss_dssp CTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEE---ECSSCCBSSEEEEETT-----------------EEEEE
T ss_pred ccCCcccccccceeccccccceeeEEEEecCCCceeeCC---CCCCCcccceeEEeCC-----------------EEEEE
Confidence 2 223468999999999999985 6889999999998866 89999
Q ss_pred cCCCCC--CcccEEEEeCCCCcccccc
Q 006645 432 GGYNGR--YNNEVHVLKPSHKSTLSSK 456 (637)
Q Consensus 432 GG~~~~--~~~~v~~~d~~~~~~~~~~ 456 (637)
||+++. ..+++++|+.+++.|....
T Consensus 323 GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 323 GGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp EEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 998754 5799999999999876543
No 9
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=292.36 Aligned_cols=217 Identities=18% Similarity=0.294 Sum_probs=193.1
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcceeE
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQV 274 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v 274 (637)
.+.||+|||... .+++++||+.+++|..+.+ +|.+|.+|+++.++++|||+||.. ....+++
T Consensus 11 ~~~l~~~GG~~~---~~~~~~~d~~~~~W~~~~~-------------~p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~ 72 (306)
T 3ii7_A 11 HDYRIALFGGSQ---PQSCRYFNPKDYSWTDIRC-------------PFEKRRDAACVFWDNVVYILGGSQ--LFPIKRM 72 (306)
T ss_dssp CCEEEEEECCSS---TTSEEEEETTTTEEEECCC-------------CSCCCBSCEEEEETTEEEEECCBS--SSBCCEE
T ss_pred cceEEEEeCCCC---CceEEEecCCCCCEecCCC-------------CCcccceeEEEEECCEEEEEeCCC--CCCcceE
Confidence 389999999655 7899999999999999854 478999999999999999999997 4678999
Q ss_pred EEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEE
Q 006645 275 KVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAA 354 (637)
Q Consensus 275 ~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~ 354 (637)
++||+.+++|..+++ +|.+|.+|++++++++||+|||.+.....++++++||+.+++|+.+.. +|.+|..|+++
T Consensus 73 ~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~ 146 (306)
T 3ii7_A 73 DCYNVVKDSWYSKLG---PPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPS---MLTQRCSHGMV 146 (306)
T ss_dssp EEEETTTTEEEEEEC---CSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECC---CSSCCBSCEEE
T ss_pred EEEeCCCCeEEECCC---CCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCC---CcCCcceeEEE
Confidence 999999999999976 899999999999999999999997555578999999999999999964 58999999999
Q ss_pred EEcCCEEEEEeCCCCCCC----cCcEEEEECCCCeeEecccCCCCCCCCcccEEEEECCccccceeeeeeccCCCCEEEE
Q 006645 355 VHAERYLLIFGGGSHAAC----FNDLHVLDLQTMEWSRPTQQGEIPTPRAGHAGVTIGENWFLGLSLVVSSYSGEDVIVA 430 (637)
Q Consensus 355 ~~~~~~l~v~GG~~~~~~----~~dl~~~d~~t~~W~~l~~~~~~p~~R~~hs~~~~~~~~yiG~s~~~~~~~g~~~l~v 430 (637)
++ +++||||||.+.... ++++++||+.+++|+.++ .+|.+|..|+++++++ +||+
T Consensus 147 ~~-~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~-----------------~i~v 205 (306)
T 3ii7_A 147 EA-NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELC---PMIEARKNHGLVFVKD-----------------KIFA 205 (306)
T ss_dssp EE-TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETT-----------------EEEE
T ss_pred EE-CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECC---CccchhhcceEEEECC-----------------EEEE
Confidence 88 678999999766554 899999999999999986 6889999999999865 8999
Q ss_pred EcCCCCC-CcccEEEEeCCCCcccccc
Q 006645 431 FGGYNGR-YNNEVHVLKPSHKSTLSSK 456 (637)
Q Consensus 431 ~GG~~~~-~~~~v~~~d~~~~~~~~~~ 456 (637)
+||.++. ..+++++||+.++.|....
T Consensus 206 ~GG~~~~~~~~~~~~yd~~~~~W~~~~ 232 (306)
T 3ii7_A 206 VGGQNGLGGLDNVEYYDIKLNEWKMVS 232 (306)
T ss_dssp ECCEETTEEBCCEEEEETTTTEEEECC
T ss_pred EeCCCCCCCCceEEEeeCCCCcEEECC
Confidence 9998765 6899999999999777653
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.9e-33 Score=289.48 Aligned_cols=222 Identities=18% Similarity=0.303 Sum_probs=197.3
Q ss_pred EECCEEEEEcc-cCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcc
Q 006645 193 VVQDKMYIYGG-NHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEI 271 (637)
Q Consensus 193 ~~~~~lyv~GG-~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~ 271 (637)
.+++.||+||| ..+...++++++||+.+++|..++. +|.+|.+|+++.++++||+|||.... ...
T Consensus 12 ~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~-------------~p~~r~~~~~~~~~~~l~v~GG~~~~-~~~ 77 (301)
T 2vpj_A 12 GANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPS-------------ITRKRRYVASVSLHDRIYVIGGYDGR-SRL 77 (301)
T ss_dssp -CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCC-------------CSSCCBSCEEEEETTEEEEECCBCSS-CBC
T ss_pred cCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCC-------------CChhhccccEEEECCEEEEEcCCCCC-ccC
Confidence 36899999999 6667889999999999999999854 46789999999999999999998743 578
Q ss_pred eeEEEEECCCCc---eEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcc
Q 006645 272 IQVKVFDLQTCS---WSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPR 348 (637)
Q Consensus 272 ~~v~~yd~~t~~---W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r 348 (637)
+++++||+.+++ |+.+++ +|.+|.+|++++++++||++||.+... .++++++||+.+++|+.+.. +|.+|
T Consensus 78 ~~~~~~d~~~~~~~~W~~~~~---~p~~r~~~~~~~~~~~lyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~---~p~~r 150 (301)
T 2vpj_A 78 SSVECLDYTADEDGVWYSVAP---MNVRRGLAGATTLGDMIYVSGGFDGSR-RHTSMERYDPNIDQWSMLGD---MQTAR 150 (301)
T ss_dssp CCEEEEETTCCTTCCCEEECC---CSSCCBSCEEEEETTEEEEECCBCSSC-BCCEEEEEETTTTEEEEEEE---CSSCC
T ss_pred ceEEEEECCCCCCCeeEECCC---CCCCccceeEEEECCEEEEEcccCCCc-ccceEEEEcCCCCeEEECCC---CCCCc
Confidence 899999999999 999965 889999999999999999999987654 48999999999999999974 48899
Q ss_pred cccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecccCCCCCCCCcccEEEEECCccccceeeeeeccCCCCEE
Q 006645 349 SDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPTQQGEIPTPRAGHAGVTIGENWFLGLSLVVSSYSGEDVI 428 (637)
Q Consensus 349 ~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~~~~~~p~~R~~hs~~~~~~~~yiG~s~~~~~~~g~~~l 428 (637)
..|+++++ +++|||+||.+....++++++||+.+++|+.+. .+|.+|..|+++++++ +|
T Consensus 151 ~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~-----------------~i 209 (301)
T 2vpj_A 151 EGAGLVVA-SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVT---PMATKRSGAGVALLND-----------------HI 209 (301)
T ss_dssp BSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETT-----------------EE
T ss_pred ccceEEEE-CCEEEEECCCCCCcccceEEEEeCCCCcEEeCC---CCCcccccceEEEECC-----------------EE
Confidence 99999998 678999999887778899999999999999985 7889999999999865 89
Q ss_pred EEEcCCCCC-CcccEEEEeCCCCcccccc
Q 006645 429 VAFGGYNGR-YNNEVHVLKPSHKSTLSSK 456 (637)
Q Consensus 429 ~v~GG~~~~-~~~~v~~~d~~~~~~~~~~ 456 (637)
|++||.++. ..+++++||+.++.|....
T Consensus 210 ~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 210 YVVGGFDGTAHLSSVEAYNIRTDSWTTVT 238 (301)
T ss_dssp EEECCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred EEEeCCCCCcccceEEEEeCCCCcEEECC
Confidence 999999875 5899999999999887653
No 11
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.4e-33 Score=287.89 Aligned_cols=219 Identities=19% Similarity=0.321 Sum_probs=194.5
Q ss_pred ccccccc----eEEecccCCCCCCCCcceeEEEECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCC
Q 006645 165 GSVVVYD----QWIAPPISGQRPKARYEHGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSP 240 (637)
Q Consensus 165 ~~~~~~~----~W~~~~~~g~~p~~R~~~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~ 240 (637)
..++.|| +|..++. +|.+|.+|++++++++|||+||..+...++++++||+.+++|+.+++
T Consensus 77 ~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~------------ 141 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVAN---MRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAP------------ 141 (302)
T ss_dssp CCEEEEETTTTEEEEECC---CSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECC------------
T ss_pred cceEEECCCCCceeeCCC---CCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCC------------
Confidence 4566665 9999985 89999999999999999999998877788999999999999999854
Q ss_pred CCCCCcccceEEEeCCEEEEEEccCCCC-CcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCC
Q 006645 241 ALLTPCAGHSLIPWENKLLSIAGHTKDP-SEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKR 319 (637)
Q Consensus 241 ~~p~~r~~hs~v~~~~~lyv~GG~~~~~-~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~ 319 (637)
+|.+|.+|+++.++++||++||..... ...+++++||+.+++|+.+++ +|.+|.+|++++++++||++||.+...
T Consensus 142 -~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~iyv~GG~~~~~ 217 (302)
T 2xn4_A 142 -MNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAE---MSTRRSGAGVGVLNNLLYAVGGHDGPL 217 (302)
T ss_dssp -CSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECC---CSSCCBSCEEEEETTEEEEECCBSSSS
T ss_pred -CCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCC---CccccccccEEEECCEEEEECCCCCCc
Confidence 478899999999999999999987653 357899999999999999965 889999999999999999999987654
Q ss_pred CCCCceEEEECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecccCCCCCCCC
Q 006645 320 SLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPTQQGEIPTPR 399 (637)
Q Consensus 320 ~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~~~~~~p~~R 399 (637)
.++++++||+.+++|+.+.. +|.+|..|+++++ +++|||+||.+....++++++||+.+++|+.++ ..+|.+|
T Consensus 218 -~~~~~~~yd~~~~~W~~~~~---~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~~~~~r 290 (302)
T 2xn4_A 218 -VRKSVEVYDPTTNAWRQVAD---MNMCRRNAGVCAV-NGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVS--SCMSTGR 290 (302)
T ss_dssp -BCCCEEEEETTTTEEEEECC---CSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEECS--SCCSSCC
T ss_pred -ccceEEEEeCCCCCEeeCCC---CCCccccCeEEEE-CCEEEEECCcCCCcccccEEEEcCCCCeEEECC--cccCccc
Confidence 57899999999999999974 5889999999887 678999999887777899999999999999985 3688999
Q ss_pred cccEEEEECC
Q 006645 400 AGHAGVTIGE 409 (637)
Q Consensus 400 ~~hs~~~~~~ 409 (637)
..|+++++++
T Consensus 291 ~~~~~~~~~~ 300 (302)
T 2xn4_A 291 SYAGVTVIDK 300 (302)
T ss_dssp BSCEEEEEEC
T ss_pred ccceEEEecc
Confidence 9999999875
No 12
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-33 Score=292.10 Aligned_cols=215 Identities=22% Similarity=0.378 Sum_probs=189.5
Q ss_pred ccccc----eEEecccCCCCCCCCcceeEEEECCEEEEEcccC--CCcccCcEEEEEccCCeEEEeeecccccCCCCCCC
Q 006645 167 VVVYD----QWIAPPISGQRPKARYEHGAAVVQDKMYIYGGNH--NGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSP 240 (637)
Q Consensus 167 ~~~~~----~W~~~~~~g~~p~~R~~~a~~~~~~~lyv~GG~~--~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~ 240 (637)
++.|| +|..+++ +|.+|.+|++++++++|||+||.. +...++++++||+.+++|+.+++
T Consensus 80 ~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~------------ 144 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPP---LPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKN------------ 144 (318)
T ss_dssp EEEEETTTTEEEECSC---BSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECC------------
T ss_pred EEEEeCCCCcEEECCC---CCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCC------------
Confidence 45554 9999874 899999999999999999999975 56778999999999999999854
Q ss_pred CCCCCcccceEEEeCCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCC
Q 006645 241 ALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRS 320 (637)
Q Consensus 241 ~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~ 320 (637)
+|.+|.+|+++.++++|||+||........+++++||+.+++|+.+++ +|.+|.+|++++++++|||+||.+...
T Consensus 145 -~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~iyv~GG~~~~~- 219 (318)
T 2woz_A 145 -LPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAP---MKTPRSMFGVAIHKGKIVIAGGVTEDG- 219 (318)
T ss_dssp -CSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECC---CSSCCBSCEEEEETTEEEEEEEEETTE-
T ss_pred -CCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCC---CCCCcccceEEEECCEEEEEcCcCCCC-
Confidence 478899999999999999999987666678999999999999999975 889999999999999999999987654
Q ss_pred CCCceEEEECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCC---------CCCcCcEEEEECCCCeeEeccc
Q 006645 321 LLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSH---------AACFNDLHVLDLQTMEWSRPTQ 391 (637)
Q Consensus 321 ~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~---------~~~~~dl~~~d~~t~~W~~l~~ 391 (637)
.++++++||+.+++|+.+.. +|.+|..|+++++ +++|||+||.+. ....+++++||+.+++|+.+
T Consensus 220 ~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~-- 293 (318)
T 2woz_A 220 LSASVEAFDLKTNKWEVMTE---FPQERSSISLVSL-AGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM-- 293 (318)
T ss_dssp EEEEEEEEETTTCCEEECCC---CSSCCBSCEEEEE-TTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--
T ss_pred ccceEEEEECCCCeEEECCC---CCCcccceEEEEE-CCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--
Confidence 57899999999999999964 5889999999988 568999999764 23578999999999999997
Q ss_pred CCCCCCCCcccEEEEECCc
Q 006645 392 QGEIPTPRAGHAGVTIGEN 410 (637)
Q Consensus 392 ~~~~p~~R~~hs~~~~~~~ 410 (637)
+|.+|+.|+++++++.
T Consensus 294 ---~~~~r~~~~~~~~~~~ 309 (318)
T 2woz_A 294 ---LKEIRYASGASCLATR 309 (318)
T ss_dssp ---ESCCGGGTTCEEEEEE
T ss_pred ---cccccccccceeeCCE
Confidence 5788999999999773
No 13
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2.3e-33 Score=291.14 Aligned_cols=215 Identities=18% Similarity=0.339 Sum_probs=189.1
Q ss_pred ccccc----eEEecccCCCCCCCCcceeEEEECCEEEEEcccC---CCcccCcEEEEEccCCeEEEeeecccccCCCCCC
Q 006645 167 VVVYD----QWIAPPISGQRPKARYEHGAAVVQDKMYIYGGNH---NGRYLSDMHILDLRSWAWSKIQAKAVAESTESPS 239 (637)
Q Consensus 167 ~~~~~----~W~~~~~~g~~p~~R~~~a~~~~~~~lyv~GG~~---~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~ 239 (637)
++.|| +|..+++ +|.+|.+|++++++++|||+||.. +...++++++||+.+++|+.+++
T Consensus 69 ~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~----------- 134 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPP---LPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDP----------- 134 (315)
T ss_dssp EEEEETTTTEEEECCC---BSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCC-----------
T ss_pred eEEecCCCCeEEECCC---CCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCC-----------
Confidence 45554 8999875 899999999999999999999964 46788999999999999999854
Q ss_pred CCCCCCcccceEEEeCCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCC
Q 006645 240 PALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKR 319 (637)
Q Consensus 240 ~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~ 319 (637)
+|.+|.+|+++.++++|||+||.......++++++||+.+++|+.+++ +|.+|.+|++++++++|||+||.+...
T Consensus 135 --~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~iyv~GG~~~~~ 209 (315)
T 4asc_A 135 --LPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAP---MQTARSLFGATVHDGRIIVAAGVTDTG 209 (315)
T ss_dssp --CSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCC---CSSCCBSCEEEEETTEEEEEEEECSSS
T ss_pred --CCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCC---CCCchhceEEEEECCEEEEEeccCCCC
Confidence 478999999999999999999996666788999999999999999976 899999999999999999999987664
Q ss_pred CCCCceEEEECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCC---------CCcCcEEEEECCCCeeEecc
Q 006645 320 SLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHA---------ACFNDLHVLDLQTMEWSRPT 390 (637)
Q Consensus 320 ~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~---------~~~~dl~~~d~~t~~W~~l~ 390 (637)
.++++++||+.+++|+.+.. +|.+|..|+++++ +++|||+||.+.. ..++++++||+.+++|+.+
T Consensus 210 -~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~- 283 (315)
T 4asc_A 210 -LTSSAEVYSITDNKWAPFEA---FPQERSSLSLVSL-VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV- 283 (315)
T ss_dssp -EEEEEEEEETTTTEEEEECC---CSSCCBSCEEEEE-TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE-
T ss_pred -ccceEEEEECCCCeEEECCC---CCCcccceeEEEE-CCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh-
Confidence 57899999999999999964 5899999999988 6689999997431 3568999999999999997
Q ss_pred cCCCCCCCCcccEEEEECCc
Q 006645 391 QQGEIPTPRAGHAGVTIGEN 410 (637)
Q Consensus 391 ~~~~~p~~R~~hs~~~~~~~ 410 (637)
.+.+|..|+++++++.
T Consensus 284 ----~~~~r~~~~~~~~~~~ 299 (315)
T 4asc_A 284 ----LREIAYAAGATFLPVR 299 (315)
T ss_dssp ----ESCSSCCSSCEEEEEE
T ss_pred ----ccCCcCccceEEeCCE
Confidence 4678999999999773
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=8.3e-33 Score=291.93 Aligned_cols=258 Identities=16% Similarity=0.173 Sum_probs=198.0
Q ss_pred CCCCCCcceeEEEECCEEEEEcccCCCcccCcEEEEEcc--CCeEEEeeecccccCCCCCCCCCC-CCcccceEEEeCCE
Q 006645 181 QRPKARYEHGAAVVQDKMYIYGGNHNGRYLSDMHILDLR--SWAWSKIQAKAVAESTESPSPALL-TPCAGHSLIPWENK 257 (637)
Q Consensus 181 ~~p~~R~~~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~--t~~W~~~~~~~~~~~~~~~~~~~p-~~r~~hs~v~~~~~ 257 (637)
++|.+|.+|++++++++|||+||..+ +++++||+. +++|+.+++ +| .+|.+|+++.++++
T Consensus 5 ~lP~~r~~~~~~~~~~~iyv~GG~~~----~~~~~~d~~~~~~~W~~~~~-------------~p~~~R~~~~~~~~~~~ 67 (357)
T 2uvk_A 5 ETPVPFKSGTGAIDNDTVYIGLGSAG----TAWYKLDTQAKDKKWTALAA-------------FPGGPRDQATSAFIDGN 67 (357)
T ss_dssp CCSSCCCSCEEEEETTEEEEECGGGT----TCEEEEETTSSSCCEEECCC-------------CTTCCCBSCEEEEETTE
T ss_pred CCCccccceEEEEECCEEEEEeCcCC----CeEEEEccccCCCCeeECCC-------------CCCCcCccceEEEECCE
Confidence 58999999999999999999999653 589999998 499999854 46 79999999999999
Q ss_pred EEEEEcc-C---CCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCC--------------
Q 006645 258 LLSIAGH-T---KDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKR-------------- 319 (637)
Q Consensus 258 lyv~GG~-~---~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~-------------- 319 (637)
||||||. . .....++++++||+.+++|+.+++.. |.+|.+|++++++++||||||.+...
T Consensus 68 lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~--p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~ 145 (357)
T 2uvk_A 68 LYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA--PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKD 145 (357)
T ss_dssp EEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC--SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTC
T ss_pred EEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC--CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCc
Confidence 9999998 2 12346789999999999999998742 58999999999999999999986432
Q ss_pred -------------------CCCCceEEEECCCCceEEecCCCCCCCcccc-cEEEEEcCCEEEEEeCCCCC-CCcCcEEE
Q 006645 320 -------------------SLLNDLHILDLETMTWDEIDAVGVPPSPRSD-HAAAVHAERYLLIFGGGSHA-ACFNDLHV 378 (637)
Q Consensus 320 -------------------~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~-h~~~~~~~~~l~v~GG~~~~-~~~~dl~~ 378 (637)
.+++++++||+.+++|+.+... |.+|.. |+++++ +++||||||.+.. ...+++++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~---p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~ 221 (357)
T 2uvk_A 146 STAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGES---PWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFE 221 (357)
T ss_dssp HHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEEC---SSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEE
T ss_pred ccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCC---CCCCcccccEEEE-CCEEEEEeeecCCCcccCceEE
Confidence 2468999999999999999643 655554 888877 6789999997543 35688999
Q ss_pred EEC--CCCeeEecccCCCCCCCCcccEEEEECCccccceeeeeeccCCCCEEEEEcCCCCC------------------C
Q 006645 379 LDL--QTMEWSRPTQQGEIPTPRAGHAGVTIGENWFLGLSLVVSSYSGEDVIVAFGGYNGR------------------Y 438 (637)
Q Consensus 379 ~d~--~t~~W~~l~~~~~~p~~R~~hs~~~~~~~~yiG~s~~~~~~~g~~~l~v~GG~~~~------------------~ 438 (637)
||+ .+++|+.+... ..|.+|..|+++++++ +||||||.+.. .
T Consensus 222 ~d~d~~~~~W~~~~~~-~~~~~~~~~~~~~~~~-----------------~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~ 283 (357)
T 2uvk_A 222 LDFTGNNLKWNKLAPV-SSPDGVAGGFAGISND-----------------SLIFAGGAGFKGSRENYQNGKNYAHEGLKK 283 (357)
T ss_dssp EECC---CEEEECCCS-STTTCCBSCEEEEETT-----------------EEEEECCEECTTHHHHHHTTCSSTTTTCCC
T ss_pred EEecCCCCcEEecCCC-CCCcccccceEEEECC-----------------EEEEEcCccccCCcccccccceeccccccc
Confidence 987 89999998633 2344567888888866 89999996421 3
Q ss_pred cccEEEEeCCCCccccc-ccCCCCCCCCccccccCCCCCcccchh
Q 006645 439 NNEVHVLKPSHKSTLSS-KMIETPVPDSVSAVQNNTNPTRDLESE 482 (637)
Q Consensus 439 ~~~v~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e 482 (637)
.+++++||+.++.|... .++..+.... .......+..+||.
T Consensus 284 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~---~~~~~~~i~v~GG~ 325 (357)
T 2uvk_A 284 SYSTDIHLWHNGKWDKSGELSQGRAYGV---SLPWNNSLLIIGGE 325 (357)
T ss_dssp EECCEEEECC---CEEEEECSSCCBSSE---EEEETTEEEEEEEE
T ss_pred eeeEEEEecCCCceeeCCCCCCCcccce---eEEeCCEEEEEeee
Confidence 47899999999977765 3443333322 23344566666764
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=6.5e-33 Score=317.48 Aligned_cols=248 Identities=15% Similarity=0.192 Sum_probs=208.7
Q ss_pred eEEecccCCCCCCCCcceeEEEECCEEEEEcccCCCcccCcEEEEEccCCeEEEee-ecccccCCCCCCCCCCCCcccce
Q 006645 172 QWIAPPISGQRPKARYEHGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQ-AKAVAESTESPSPALLTPCAGHS 250 (637)
Q Consensus 172 ~W~~~~~~g~~p~~R~~~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~-~~~~~~~~~~~~~~~p~~r~~hs 250 (637)
+|...+ ..|.+|++|+++ ++++|||+||..+ ..++++++||+.+++|+.+. +++ ...+|.+|.+|+
T Consensus 378 ~~~~~~---~~p~rr~g~~~~-~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p--------~~~~p~~R~~hs 444 (695)
T 2zwa_A 378 QLLECE---CPINRKFGDVDV-AGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVS--------SSEVPVARMCHT 444 (695)
T ss_dssp EEEECC---CTTCCBSCEEEE-CSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCC--------CSCCCCCCBSCE
T ss_pred eEeccC---CCCCCceeEEEE-ECCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCC--------CCCCCccccceE
Confidence 455443 356677776554 8999999999877 78899999999999999997 421 134789999999
Q ss_pred EEEe--CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE-CCEEEEEeCCCCCCCCCCceEE
Q 006645 251 LIPW--ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GTSLVIFGGEDAKRSLLNDLHI 327 (637)
Q Consensus 251 ~v~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~n~i~~ 327 (637)
++.+ +++|||+||.......++++++||+.+++|+.+++ +|.+|.+|+++++ +++||||||.+... ++++
T Consensus 445 ~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~---~p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~ 517 (695)
T 2zwa_A 445 FTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKS---LSHTRFRHSACSLPDGNVLILGGVTEGP----AMLL 517 (695)
T ss_dssp EEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCC---CSBCCBSCEEEECTTSCEEEECCBCSSC----SEEE
T ss_pred EEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCC---CCCCcccceEEEEcCCEEEEECCCCCCC----CEEE
Confidence 9999 99999999998765578999999999999999965 8999999999997 99999999987654 8999
Q ss_pred EECCCCceEEecCCCCCCCcccccEEEEEc-C-CEEEEEeCCCCC--CCcCcEEEEECCCCe------eEecccCCCCCC
Q 006645 328 LDLETMTWDEIDAVGVPPSPRSDHAAAVHA-E-RYLLIFGGGSHA--ACFNDLHVLDLQTME------WSRPTQQGEIPT 397 (637)
Q Consensus 328 yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~-~-~~l~v~GG~~~~--~~~~dl~~~d~~t~~------W~~l~~~~~~p~ 397 (637)
||+.+++|+.+.+.+.+|.+|.+|++++++ + ++||||||.+.. ..++++++||+.++. |+.+.. .++.
T Consensus 518 yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~--~p~~ 595 (695)
T 2zwa_A 518 YNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ--HPLF 595 (695)
T ss_dssp EETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE--CGGG
T ss_pred EECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC--CCCC
Confidence 999999999999877789999999977764 2 789999997543 568999999999999 888763 1358
Q ss_pred CCcccEEEEECCccccceeeeeeccCCCCEEEEEcCCCCC----CcccEEEEeCCCCccccccc
Q 006645 398 PRAGHAGVTIGENWFLGLSLVVSSYSGEDVIVAFGGYNGR----YNNEVHVLKPSHKSTLSSKM 457 (637)
Q Consensus 398 ~R~~hs~~~~~~~~yiG~s~~~~~~~g~~~l~v~GG~~~~----~~~~v~~~d~~~~~~~~~~~ 457 (637)
+|++|+++++++ ++|||+||+++. ..+++++||+.++.|....+
T Consensus 596 ~R~~~~~~~~~~----------------~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 643 (695)
T 2zwa_A 596 QRYGSQIKYITP----------------RKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPI 643 (695)
T ss_dssp CCBSCEEEEEET----------------TEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECCC
T ss_pred CcccceEEEeCC----------------CEEEEECCccCCCCCCCCCeEEEEECCCCeEEEeec
Confidence 899999999872 289999998653 58999999999998885444
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=4.8e-33 Score=318.60 Aligned_cols=251 Identities=19% Similarity=0.198 Sum_probs=207.5
Q ss_pred Cccccccc----eEEecc-c--CCCCCCCCcceeEEEE--CCEEEEEcccCCCc-ccCcEEEEEccCCeEEEeeeccccc
Q 006645 164 LGSVVVYD----QWIAPP-I--SGQRPKARYEHGAAVV--QDKMYIYGGNHNGR-YLSDMHILDLRSWAWSKIQAKAVAE 233 (637)
Q Consensus 164 ~~~~~~~~----~W~~~~-~--~g~~p~~R~~~a~~~~--~~~lyv~GG~~~~~-~~~~v~~yd~~t~~W~~~~~~~~~~ 233 (637)
++.++.|| +|..++ + .|.+|.+|.+|+++++ +++|||+||..+.. .++++++||+.+++|+.+.+
T Consensus 411 ~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~----- 485 (695)
T 2zwa_A 411 VNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKS----- 485 (695)
T ss_dssp CCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCC-----
T ss_pred cCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCC-----
Confidence 45566675 899987 3 4678999999999999 99999999986643 78999999999999999854
Q ss_pred CCCCCCCCCCCCcccceEEEe-CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEEC---CEE
Q 006645 234 STESPSPALLTPCAGHSLIPW-ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVG---TSL 309 (637)
Q Consensus 234 ~~~~~~~~~p~~r~~hs~v~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~---~~l 309 (637)
+|.+|.+|+++.+ +++||||||.+... ++++||+.+++|+.+++.|.+|.+|.+|++++++ ++|
T Consensus 486 --------~p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 486 --------LSHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp --------CSBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred --------CCCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 4789999999997 99999999997653 8999999999999999888899999999988877 899
Q ss_pred EEEeCCCCCC-CCCCceEEEECCCCc------eEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCC---CcCcEEEE
Q 006645 310 VIFGGEDAKR-SLLNDLHILDLETMT------WDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAA---CFNDLHVL 379 (637)
Q Consensus 310 yv~GG~~~~~-~~~n~i~~yd~~t~~------W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~---~~~dl~~~ 379 (637)
|||||....+ .+++++++||+.+++ |+.+... ++.+|.+|+++++++++|||+||.+... ..+++++|
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~--p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~y 631 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQH--PLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISL 631 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEEC--GGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEE
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCC--CCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEE
Confidence 9999986543 568999999999999 8888653 3688999999998658899999976543 57899999
Q ss_pred ECCCCeeEecccCCC----CCCCCcccEEEEECCccccceeeeeeccCCCCEEEEEcCCC-----CCCcccEEEEeCCC
Q 006645 380 DLQTMEWSRPTQQGE----IPTPRAGHAGVTIGENWFLGLSLVVSSYSGEDVIVAFGGYN-----GRYNNEVHVLKPSH 449 (637)
Q Consensus 380 d~~t~~W~~l~~~~~----~p~~R~~hs~~~~~~~~yiG~s~~~~~~~g~~~l~v~GG~~-----~~~~~~v~~~d~~~ 449 (637)
|+.+++|+.+..... .++.+.+|+++++++. +||||||.. |.+.|++|.+|+..
T Consensus 632 d~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~~g----------------~i~v~GGg~~cfsfGt~~n~i~~ldl~~ 694 (695)
T 2zwa_A 632 DPLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMG----------------TIHIIGGGATCYGFGSVTNVGLKLIAIA 694 (695)
T ss_dssp ETTTTEEEECCCCHHHHHHSCCCCSSCEEECC-------------------CEEEECCEEECTTSCEEECCCEEEEECC
T ss_pred ECCCCeEEEeeccccccCCCCccceeeeEEEeCCC----------------EEEEEeCCccCcCccccccceEEEEEEc
Confidence 999999997643211 1235778988877542 799999942 44677999998764
No 17
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=99.97 E-value=7.3e-31 Score=214.77 Aligned_cols=88 Identities=27% Similarity=0.554 Sum_probs=81.3
Q ss_pred cHHHHHHHHHHhcccCCCCcccccccCCCChHHHHHHhhhheeeeeCCCCCCCCCCCCHhhhHHHHHHhcCCCCCHHHHH
Q 006645 12 YPERFYAAASYAGFDGSPNSSAKELTSKFSNDSALLLYALYQQATVGPCNVPKPSSWSPVEQSKWKSWQGLGNMATTEAM 91 (637)
Q Consensus 12 ~~~~f~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~ly~l~kqa~~g~~~~~~p~~~~~~~~~k~~aw~~~~~~s~~~a~ 91 (637)
|+++|++|+++|+... + ...|+++++|+|||||||||+|||++++||+||++|++||+||++++|||++|||
T Consensus 2 l~~~F~~A~~~v~~l~------~--~~~~~~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~ 73 (89)
T 1hbk_A 2 MAQVFEECVSFINGLP------R--TINLPNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKKYEAWKSVENLNREDAQ 73 (89)
T ss_dssp HHHHHHHHHHHHHHSC------T--TCCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTSHHHHHHHHHHHHTTTCCHHHHH
T ss_pred hHHHHHHHHHHHHhcC------C--cCCCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHhHHHHHHHHHhcCCCHHHHH
Confidence 6799999999996321 1 2789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCccc
Q 006645 92 RLFVKILEEEDPGWYS 107 (637)
Q Consensus 92 ~~yv~~~~~~~~~~~~ 107 (637)
++||++|++++|+|.+
T Consensus 74 ~~YI~~v~~l~~~~~~ 89 (89)
T 1hbk_A 74 KRYVDIVSEIFPYWQD 89 (89)
T ss_dssp HHHHHHHHHHCTTTTC
T ss_pred HHHHHHHHHHcccccC
Confidence 9999999999999964
No 18
>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.96 E-value=1.9e-30 Score=219.32 Aligned_cols=94 Identities=33% Similarity=0.648 Sum_probs=87.8
Q ss_pred CCCCcHHHHHHHHHHhcccCCCCcccccccCCCChHHHHHHhhhheeeeeCCCCCCCCCCCCHhhhHHHHHHhcCCCCCH
Q 006645 8 SGLAYPERFYAAASYAGFDGSPNSSAKELTSKFSNDSALLLYALYQQATVGPCNVPKPSSWSPVEQSKWKSWQGLGNMAT 87 (637)
Q Consensus 8 ~~~~~~~~f~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~ly~l~kqa~~g~~~~~~p~~~~~~~~~k~~aw~~~~~~s~ 87 (637)
....|+++|++|+++|+ .+...|+++++|+|||||||||+|||++++|++||+++++||+||++|+|||+
T Consensus 4 ~~~~l~~~F~~A~~~vk----------~l~~~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~ 73 (109)
T 2cop_A 4 GSSGLAELFEKAAAHLQ----------GLIQVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSP 73 (109)
T ss_dssp CCCCSHHHHHHHHHHHT----------TSTTTSCHHHHHHHHHHHHHHHTCSCCSCCCCSSCHHHHHHHHHHHSCTTCCH
T ss_pred cchHHHHHHHHHHHHHH----------HcccCCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHHHHHHHHHHHhcCCCH
Confidence 34568999999999995 45678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCccccCcc
Q 006645 88 TEAMRLFVKILEEEDPGWYSRASN 111 (637)
Q Consensus 88 ~~a~~~yv~~~~~~~~~~~~~~~~ 111 (637)
+|||++||++|++++|.|....+.
T Consensus 74 eeAm~~YI~lv~~l~~~~~~~~~~ 97 (109)
T 2cop_A 74 SQAMQEYIAVVKKLDPGWNPQIPE 97 (109)
T ss_dssp HHHHHHHHHHHHHHCTTCCCCCCC
T ss_pred HHHHHHHHHHHHHHhhhhcccchh
Confidence 999999999999999999988775
No 19
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1
Probab=99.96 E-value=5.5e-31 Score=214.38 Aligned_cols=87 Identities=24% Similarity=0.374 Sum_probs=82.0
Q ss_pred CCcHHHHHHHHHHhcccCCCCcccccccCCCChHHHHHHhhhheeeeeCCCCCCCCCCCCHhhhHHHHHHhcCCCCCHHH
Q 006645 10 LAYPERFYAAASYAGFDGSPNSSAKELTSKFSNDSALLLYALYQQATVGPCNVPKPSSWSPVEQSKWKSWQGLGNMATTE 89 (637)
Q Consensus 10 ~~~~~~f~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~ly~l~kqa~~g~~~~~~p~~~~~~~~~k~~aw~~~~~~s~~~ 89 (637)
++|+++|++|+++|+ .+...|+++++|+|||||||||+|||++++||+||+++++||+||++++|||++|
T Consensus 2 m~L~~~F~~A~~~vk----------~l~~~p~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~g~s~ee 71 (89)
T 3epy_A 2 MALQADFDRAAEDVR----------KLKARPDDGELKELYGLYKQAIVGDINIACPGMLDLKGKAKWEAWNLKKGLSTED 71 (89)
T ss_dssp CHHHHHHHHHHHHGG----------GCSSCCCHHHHHHHHHHHHHHHTCSCCSCCTTTTCHHHHHHHHHHHTTTTCCHHH
T ss_pred CcHHHHHHHHHHHHH----------HcCCCcCHHHHHHHHHHHHHHhhCCCCCCCCcccchHHHHHHHHHHHhhCCCHHH
Confidence 458999999999995 4567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCcc
Q 006645 90 AMRLFVKILEEEDPGWY 106 (637)
Q Consensus 90 a~~~yv~~~~~~~~~~~ 106 (637)
||++||++|++++|.|.
T Consensus 72 A~~~Yi~~v~~l~~ky~ 88 (89)
T 3epy_A 72 ATSAYISKAKELIEKYG 88 (89)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhhhc
Confidence 99999999999998763
No 20
>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.8e-31 Score=213.93 Aligned_cols=85 Identities=29% Similarity=0.502 Sum_probs=80.9
Q ss_pred cHHHHHHHHHHhcccCCCCcccccccCCCChHHHHHHhhhheeeeeCCCCCCCCCCCCHhhhHHHHHHhcCCCCCHHHHH
Q 006645 12 YPERFYAAASYAGFDGSPNSSAKELTSKFSNDSALLLYALYQQATVGPCNVPKPSSWSPVEQSKWKSWQGLGNMATTEAM 91 (637)
Q Consensus 12 ~~~~f~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~ly~l~kqa~~g~~~~~~p~~~~~~~~~k~~aw~~~~~~s~~~a~ 91 (637)
|+++|++|+++|+ .+...|+++++|+|||||||||+|||++++||+||++|++||+||++++|||++|||
T Consensus 1 l~~~F~~A~~~v~----------~l~~~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeA~ 70 (86)
T 1st7_A 1 VSQLFEEKAKAVN----------ELPTKPSTDELLELYALYKQATVGDNDKEKPGIFNMKDRYKWEAWENLKGKSQEDAE 70 (86)
T ss_dssp CHHHHHHHHHHHT----------SCSSCCCHHHHHHHHHHHHHHHHCSCCCCCCCSSCHHHHHHHHHHHTTTTTHHHHHH
T ss_pred CHHHHHHHHHHHH----------HccCCcCHHHHHHHHHHHHHHhhCCCCCCCCCccCHHHHHHHHHHHHcCCCCHHHHH
Confidence 5789999999995 455789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcc
Q 006645 92 RLFVKILEEEDPGWY 106 (637)
Q Consensus 92 ~~yv~~~~~~~~~~~ 106 (637)
++||++|++++|.|.
T Consensus 71 ~~YI~~v~~l~~~~~ 85 (86)
T 1st7_A 71 KEYIALVDQLIAKYS 85 (86)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhhhc
Confidence 999999999999985
No 21
>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.96 E-value=2.7e-30 Score=219.58 Aligned_cols=100 Identities=31% Similarity=0.581 Sum_probs=90.9
Q ss_pred ccccccCCCCcHHHHHHHHHHhcccCCCCcccccccCCCChHHHHHHhhhheeeeeCCCCCCCCCCCCHhhhHHHHHHhc
Q 006645 2 AMARASSGLAYPERFYAAASYAGFDGSPNSSAKELTSKFSNDSALLLYALYQQATVGPCNVPKPSSWSPVEQSKWKSWQG 81 (637)
Q Consensus 2 ~~~~~~~~~~~~~~f~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~ly~l~kqa~~g~~~~~~p~~~~~~~~~k~~aw~~ 81 (637)
||....|. .++++|++|+++|+ .+...|+++++|+|||||||||+|||++++|++||+++++||+||++
T Consensus 7 ~~~~~~m~-~~~~~F~~A~~~vk----------~l~~~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~ 75 (116)
T 2cqu_A 7 GMNRTAMR-ASQKDFENSMNQVK----------LLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNA 75 (116)
T ss_dssp CCCCSSCC-CCHHHHHHHHHHHH----------HCCSCCCHHHHHHHHHHHTTTTTCSCCSCCCCTTCHHHHHHHHHHHH
T ss_pred ccccccHH-HHHHHHHHHHHHHH----------HccCCCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHH
Confidence 55555554 36999999999995 55677999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCccccCccC
Q 006645 82 LGNMATTEAMRLFVKILEEEDPGWYSRASNS 112 (637)
Q Consensus 82 ~~~~s~~~a~~~yv~~~~~~~~~~~~~~~~~ 112 (637)
|+|||++|||++||++|++++|.|.+...+.
T Consensus 76 l~gms~eeAm~~YI~lv~~l~~~~~~~~~~~ 106 (116)
T 2cqu_A 76 LGSLPKEAARQNYVDLVSSLSPSLESSSQVE 106 (116)
T ss_dssp HCSCCHHHHHHHHHHHHHHHCSCCCCCCCCC
T ss_pred hcCCCHHHHHHHHHHHHHHHccccccccccc
Confidence 9999999999999999999999999887753
No 22
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}
Probab=99.96 E-value=4.5e-30 Score=210.51 Aligned_cols=84 Identities=40% Similarity=0.721 Sum_probs=79.8
Q ss_pred HHHHHHHHHhcccCCCCccccccc-CCCChHHHHHHhhhheeeeeCCCCCCCCCCCCHhhhHHHHHHhcCCCCCHHHHHH
Q 006645 14 ERFYAAASYAGFDGSPNSSAKELT-SKFSNDSALLLYALYQQATVGPCNVPKPSSWSPVEQSKWKSWQGLGNMATTEAMR 92 (637)
Q Consensus 14 ~~f~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~l~ly~l~kqa~~g~~~~~~p~~~~~~~~~k~~aw~~~~~~s~~~a~~ 92 (637)
++|++|++.|+ .++ ..|+++++|+|||||||||+|||++++||+||++|++||+||++++|||++|||+
T Consensus 12 ~~F~~A~~~vk----------~l~~~~ps~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeAm~ 81 (96)
T 2lbb_A 12 DDFDAAVKYVS----------NTTTMMASNDDKLCFYKYYKQATVGDCNKPKPGMLQLQEKYKWEAWNALRGMSTESAKE 81 (96)
T ss_dssp STHHHHHHHHH----------HCCCSCCCTTTTTHHHHHHHHTTTSSCCCCCCCSSCSHHHHHHHHHHHTTTCCHHHHHH
T ss_pred HHHHHHHHHHH----------hCCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHhHHHHHHHHHhcCCCHHHHHH
Confidence 57999999995 455 7899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCccc
Q 006645 93 LFVKILEEEDPGWYS 107 (637)
Q Consensus 93 ~yv~~~~~~~~~~~~ 107 (637)
+||++|++++|.|.+
T Consensus 82 ~YI~lv~~l~~~~~~ 96 (96)
T 2lbb_A 82 AYVKLLDTLAPSWRN 96 (96)
T ss_dssp HHHHHHHHHCGGGTC
T ss_pred HHHHHHHHHhchhcC
Confidence 999999999999964
No 23
>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A
Probab=99.96 E-value=1e-29 Score=206.56 Aligned_cols=84 Identities=29% Similarity=0.509 Sum_probs=79.9
Q ss_pred HHHHHHHHHHhcccCCCCcccccccCCCChHHHHHHhhhheeeeeCCCCCCCCCCCCHhhhHHHHHHhcCCCCCHHHHHH
Q 006645 13 PERFYAAASYAGFDGSPNSSAKELTSKFSNDSALLLYALYQQATVGPCNVPKPSSWSPVEQSKWKSWQGLGNMATTEAMR 92 (637)
Q Consensus 13 ~~~f~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~ly~l~kqa~~g~~~~~~p~~~~~~~~~k~~aw~~~~~~s~~~a~~ 92 (637)
+++|++|+++|+ .+...|+++++|+|||||||||+|||++++||+||++|++||+||++++|||++|||+
T Consensus 3 ~~~F~~A~~~vk----------~l~~~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~ 72 (87)
T 2cb8_A 3 QAEFEKAAEEVR----------HLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMK 72 (87)
T ss_dssp HHHHHHHHHHGG----------GCSSCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHH
T ss_pred HHHHHHHHHHHH----------HccCCcCHHHHHHHHHHHHhhhhCCCCCCCCCcccHHHHHHHHHHHHcCCCCHHHHHH
Confidence 789999999995 4567899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCcc
Q 006645 93 LFVKILEEEDPGWY 106 (637)
Q Consensus 93 ~yv~~~~~~~~~~~ 106 (637)
+||++|++++|.|.
T Consensus 73 ~Yi~~v~~l~~~~~ 86 (87)
T 2cb8_A 73 AYINKVEELKKKYG 86 (87)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999999874
No 24
>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0
Probab=99.95 E-value=3.8e-29 Score=209.27 Aligned_cols=89 Identities=24% Similarity=0.350 Sum_probs=81.7
Q ss_pred CCcHHHHHHHHHHhcccCCCCcccccccCCCChHHHHHHhhhheeeeeCCCCCCCCCCCCHhhhHHHHHHhcCCCCCHHH
Q 006645 10 LAYPERFYAAASYAGFDGSPNSSAKELTSKFSNDSALLLYALYQQATVGPCNVPKPSSWSPVEQSKWKSWQGLGNMATTE 89 (637)
Q Consensus 10 ~~~~~~f~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~ly~l~kqa~~g~~~~~~p~~~~~~~~~k~~aw~~~~~~s~~~ 89 (637)
++++++|++|+++|+.. ++.+...|+++++|+|||||||||+|||++++||+||+++++||+||++++|||++|
T Consensus 2 ~~~~~~F~~A~~~vk~l------~~~g~~~ps~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gmS~ee 75 (106)
T 3fp5_A 2 HMSKAKFDKAVEIVQSL------PKDGPIKPTQDEQLYFYKYFKQATVGDVNISRPGLMDFTGKAKWDAWKSVEGTSKEV 75 (106)
T ss_dssp CCCHHHHHHHHHHHHHC------CSSSSSCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHH
T ss_pred CchHHHHHHHHHHHHhc------ccccCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCccchHHHHHHHHHHHccCCCHHH
Confidence 45699999999999732 233446899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCC
Q 006645 90 AMRLFVKILEEEDPG 104 (637)
Q Consensus 90 a~~~yv~~~~~~~~~ 104 (637)
||++||++|++++|.
T Consensus 76 A~~~YI~~v~~l~~~ 90 (106)
T 3fp5_A 76 AYQKYVEKLLEILKK 90 (106)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999999987
No 25
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=99.95 E-value=5.8e-29 Score=208.49 Aligned_cols=94 Identities=31% Similarity=0.579 Sum_probs=82.5
Q ss_pred CcHHHHHHHHHHhcccCCCCcccccccCCCChHHHHHHhhhheeeeeCCCCCCCCCCCCHhhhHHHHHHhcCCCCCHHHH
Q 006645 11 AYPERFYAAASYAGFDGSPNSSAKELTSKFSNDSALLLYALYQQATVGPCNVPKPSSWSPVEQSKWKSWQGLGNMATTEA 90 (637)
Q Consensus 11 ~~~~~f~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~ly~l~kqa~~g~~~~~~p~~~~~~~~~k~~aw~~~~~~s~~~a 90 (637)
.++++|++|+++|+.. ++.+...|+++++|+|||||||||+|||+.++||+||+++++||+||++++|||++||
T Consensus 7 ~l~~~F~~A~~~vk~l------~~~g~~~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA 80 (106)
T 2wh5_A 7 DCQKQFQAAVSVIQNL------PKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEA 80 (106)
T ss_dssp --CHHHHHHHHHHHHS------CSSCSCCCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHH
T ss_pred HHHHHHHHHHHHHHhc------cccCCCCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHH
Confidence 4789999999999632 2234458999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCccccCc
Q 006645 91 MRLFVKILEEEDPGWYSRAS 110 (637)
Q Consensus 91 ~~~yv~~~~~~~~~~~~~~~ 110 (637)
|++||+++++++|.+.+..+
T Consensus 81 ~~~YI~~v~~l~~k~~~t~~ 100 (106)
T 2wh5_A 81 MSAYITEMKLVAQKVIDTVP 100 (106)
T ss_dssp HHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHhhccCC
Confidence 99999999999998876654
No 26
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}
Probab=99.95 E-value=1.1e-28 Score=209.23 Aligned_cols=90 Identities=31% Similarity=0.570 Sum_probs=81.7
Q ss_pred CcHHHHHHHHHHhcccCCCCcccccccCCCChHHHHHHhhhheeeeeCCCCCCCCCCCCHhhhHHHHHHhcCCCCCHHHH
Q 006645 11 AYPERFYAAASYAGFDGSPNSSAKELTSKFSNDSALLLYALYQQATVGPCNVPKPSSWSPVEQSKWKSWQGLGNMATTEA 90 (637)
Q Consensus 11 ~~~~~f~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~ly~l~kqa~~g~~~~~~p~~~~~~~~~k~~aw~~~~~~s~~~a 90 (637)
.|+++|++|+++|+. +++.+...|+++++|+|||||||||+|||+.++||+||+++++||+||++++|||++||
T Consensus 23 dLe~~F~~A~~~Vk~------l~~~g~~~ps~d~~L~LYaLyKQAT~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeA 96 (119)
T 3flv_A 23 MHETRFEAAVKVIQS------LPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEEA 96 (119)
T ss_dssp HHHHHHHHHHHHHHH------HHHHSSCCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHHTTTCCHHHH
T ss_pred HHHHHHHHHHHHHHh------CcccCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCccCHHHHHHHHHHHHccCCCHHHH
Confidence 578999999999963 23444557999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCcc
Q 006645 91 MRLFVKILEEEDPGWY 106 (637)
Q Consensus 91 ~~~yv~~~~~~~~~~~ 106 (637)
|++||++|++++++.-
T Consensus 97 m~~YI~~v~~l~~~~~ 112 (119)
T 3flv_A 97 MIAYVEEMKKIIETMP 112 (119)
T ss_dssp HHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhhCC
Confidence 9999999999987653
No 27
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.95 E-value=8.7e-27 Score=265.96 Aligned_cols=267 Identities=13% Similarity=0.121 Sum_probs=194.1
Q ss_pred ceEEecccCCCCCCCCcceeEEEE--CCEEEEEcccCCCc------ccCcEEEEEccCCeEEEeeecccccCCCCCCCCC
Q 006645 171 DQWIAPPISGQRPKARYEHGAAVV--QDKMYIYGGNHNGR------YLSDMHILDLRSWAWSKIQAKAVAESTESPSPAL 242 (637)
Q Consensus 171 ~~W~~~~~~g~~p~~R~~~a~~~~--~~~lyv~GG~~~~~------~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~ 242 (637)
++|..+.+ .||..|+++++ +++|||+||..... ..+++++||+.+++|+.+..+
T Consensus 176 ~~W~~~~~-----~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~------------- 237 (656)
T 1k3i_A 176 GRWGPTID-----LPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVT------------- 237 (656)
T ss_dssp CEEEEEEE-----CSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEE-------------
T ss_pred Ceeeeecc-----CCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCccc-------------
Confidence 49998763 34566777777 99999999965432 245799999999999998765
Q ss_pred CCCcccce--EEE-eCCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE-CCEEEEEeCCCCC
Q 006645 243 LTPCAGHS--LIP-WENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GTSLVIFGGEDAK 318 (637)
Q Consensus 243 p~~r~~hs--~v~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~ 318 (637)
|.+|..|+ ++. .+++||++||.... ++++||+.+++|..+++ +|.+|.+|+++++ +++||++||....
T Consensus 238 ~~~~~~~~~~~~~~~~g~lyv~GG~~~~-----~v~~yd~~t~~W~~~~~---~~~~R~~~s~~~~~dg~iyv~GG~~~~ 309 (656)
T 1k3i_A 238 VTKHDMFCPGISMDGNGQIVVTGGNDAK-----KTSLYDSSSDSWIPGPD---MQVARGYQSSATMSDGRVFTIGGSWSG 309 (656)
T ss_dssp ECSCCCSSCEEEECTTSCEEEECSSSTT-----CEEEEEGGGTEEEECCC---CSSCCSSCEEEECTTSCEEEECCCCCS
T ss_pred CCCCCCccccccCCCCCCEEEeCCCCCC-----ceEEecCcCCceeECCC---CCccccccceEEecCCeEEEEeCcccC
Confidence 34454443 443 58999999998643 79999999999999965 8999999999999 9999999995444
Q ss_pred CCCCCceEEEECCCCceEEecCCCC--CC---------------------------------------------------
Q 006645 319 RSLLNDLHILDLETMTWDEIDAVGV--PP--------------------------------------------------- 345 (637)
Q Consensus 319 ~~~~n~i~~yd~~t~~W~~~~~~~~--~p--------------------------------------------------- 345 (637)
...++++++||+.+++|+.++..+. ++
T Consensus 310 ~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~ 389 (656)
T 1k3i_A 310 GVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQ 389 (656)
T ss_dssp SSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECE
T ss_pred CcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccc
Confidence 4468999999999999999732110 01
Q ss_pred ------CcccccEEEEE--cCCEEEEEeCCCC---CCCcC---cEEEEECCCCeeEecccCCCCCCCCcccEEEEECCcc
Q 006645 346 ------SPRSDHAAAVH--AERYLLIFGGGSH---AACFN---DLHVLDLQTMEWSRPTQQGEIPTPRAGHAGVTIGENW 411 (637)
Q Consensus 346 ------~~r~~h~~~~~--~~~~l~v~GG~~~---~~~~~---dl~~~d~~t~~W~~l~~~~~~p~~R~~hs~~~~~~~~ 411 (637)
.++..++++++ .+++||||||... ...++ .+++||+.++.|..+. .+.+|.+|..|+++++.+.
T Consensus 390 ~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~-~~~mp~~R~~~~~~~l~~g- 467 (656)
T 1k3i_A 390 SNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA-SNGLYFARTFHTSVVLPDG- 467 (656)
T ss_dssp ETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC-TTCCSSCCBSCEEEECTTS-
T ss_pred cccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc-cCCCCCCcccCCeEECCCC-
Confidence 11234455542 3788999999642 33344 7899999999999875 3478999999999888331
Q ss_pred ccceeeeeeccCCCCEEEEEcCCCC-------CCcccEEEEeCCCCcccccc-cCCCCCCCCccccccCCCCCcccch
Q 006645 412 FLGLSLVVSSYSGEDVIVAFGGYNG-------RYNNEVHVLKPSHKSTLSSK-MIETPVPDSVSAVQNNTNPTRDLES 481 (637)
Q Consensus 412 yiG~s~~~~~~~g~~~l~v~GG~~~-------~~~~~v~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (637)
+|||+||.+. ...+++++||+.++.|.... ++..+..++...+.+ ...+..+|+
T Consensus 468 ---------------~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~-dg~v~v~GG 529 (656)
T 1k3i_A 468 ---------------STFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLP-DGRVFNGGG 529 (656)
T ss_dssp ---------------CEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECT-TSCEEEEEC
T ss_pred ---------------CEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCC-CcEEEecCC
Confidence 8999999752 35789999999999776543 444444444332222 233444454
No 28
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.94 E-value=7.2e-26 Score=258.35 Aligned_cols=241 Identities=12% Similarity=0.121 Sum_probs=182.6
Q ss_pred cccccc----eEEecccCCCCCCCCccee--EEE-ECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCC
Q 006645 166 SVVVYD----QWIAPPISGQRPKARYEHG--AAV-VQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESP 238 (637)
Q Consensus 166 ~~~~~~----~W~~~~~~g~~p~~R~~~a--~~~-~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~ 238 (637)
.+..|| +|..++. +|.+|..|+ +++ .+++|||+||.... ++++||+.+++|..+.+
T Consensus 220 ~~~~yd~~t~~w~~~~~---~~~~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~~W~~~~~---------- 282 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTV---TVTKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSDSWIPGPD---------- 282 (656)
T ss_dssp EEEEECTTTCCBCCCEE---EECSCCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGTEEEECCC----------
T ss_pred EEEEEeCCCCcEEeCcc---cCCCCCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCCceeECCC----------
Confidence 455564 9998875 666776654 333 58999999996543 79999999999999854
Q ss_pred CCCCCCCcccceEEEe-CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCC--CCCC--------------------
Q 006645 239 SPALLTPCAGHSLIPW-ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYG--KPPV-------------------- 295 (637)
Q Consensus 239 ~~~~p~~r~~hs~v~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g--~~p~-------------------- 295 (637)
++.+|.+|+++.+ +++|||+||........+++++||+.+++|+.++..+ +++.
T Consensus 283 ---~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~ 359 (656)
T 1k3i_A 283 ---MQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKK 359 (656)
T ss_dssp ---CSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGG
T ss_pred ---CCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCC
Confidence 4789999999999 9999999996444457889999999999999973211 0111
Q ss_pred -------------------------------------CCCceEEEE---ECCEEEEEeCCCC--CCCCCC---ceEEEEC
Q 006645 296 -------------------------------------SRGGQSVTL---VGTSLVIFGGEDA--KRSLLN---DLHILDL 330 (637)
Q Consensus 296 -------------------------------------~r~~~~~~~---~~~~lyv~GG~~~--~~~~~n---~i~~yd~ 330 (637)
++..++++. ++++||+|||.+. ....++ .+++||+
T Consensus 360 g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~ 439 (656)
T 1k3i_A 360 GSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEP 439 (656)
T ss_dssp GCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCST
T ss_pred CcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCC
Confidence 122334443 4899999999743 112344 7899999
Q ss_pred CCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCC------CCCcCcEEEEECCCCeeEecccCCCCCCCCcccEE
Q 006645 331 ETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSH------AACFNDLHVLDLQTMEWSRPTQQGEIPTPRAGHAG 404 (637)
Q Consensus 331 ~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~------~~~~~dl~~~d~~t~~W~~l~~~~~~p~~R~~hs~ 404 (637)
.+++|..+. .+.+|.+|..|+++++.+++|||+||.+. ...++++++||+.+++|+.+. .++.+|.+|++
T Consensus 440 ~~~~W~~~~-~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~---~~~~~R~~hs~ 515 (656)
T 1k3i_A 440 GTSPNTVFA-SNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQN---PNSIVRVYHSI 515 (656)
T ss_dssp TSCCEEEEC-TTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECC---CCSSCCCTTEE
T ss_pred CCCCeeEEc-cCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecC---CCCCccccccH
Confidence 999999986 23568999999999987788999999652 345789999999999999875 78899999998
Q ss_pred EEE--CCccccceeeeeeccCCCCEEEEEcCC-CCC---CcccEEEEeC
Q 006645 405 VTI--GENWFLGLSLVVSSYSGEDVIVAFGGY-NGR---YNNEVHVLKP 447 (637)
Q Consensus 405 ~~~--~~~~yiG~s~~~~~~~g~~~l~v~GG~-~~~---~~~~v~~~d~ 447 (637)
+++ ++ +||++||. ++. ...++.+|.|
T Consensus 516 a~ll~dg-----------------~v~v~GG~~~~~~~~~~~~~e~~~P 547 (656)
T 1k3i_A 516 SLLLPDG-----------------RVFNGGGGLCGDCTTNHFDAQIFTP 547 (656)
T ss_dssp EEECTTS-----------------CEEEEECCCCTTCSCCCCEEEEEEC
T ss_pred hhcCCCc-----------------EEEecCCCCCCCCCCCeeEEEEEeC
Confidence 877 33 89999995 222 2345666665
No 29
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.16 E-value=0.00049 Score=67.02 Aligned_cols=164 Identities=16% Similarity=0.137 Sum_probs=110.7
Q ss_pred CCcceeEEEECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEcc
Q 006645 185 ARYEHGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGH 264 (637)
Q Consensus 185 ~R~~~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~ 264 (637)
.-+-+..+..++.||+..|..+. +.+.++|+.|++-...... +....+.+++..+++||+....
T Consensus 20 ~~ftqGL~~~~~~LyestG~~g~---S~v~~vD~~tgkv~~~~~l-------------~~~~fgeGi~~~~~~ly~ltw~ 83 (243)
T 3mbr_X 20 TAFTEGLFYLRGHLYESTGETGR---SSVRKVDLETGRILQRAEV-------------PPPYFGAGIVAWRDRLIQLTWR 83 (243)
T ss_dssp TCCEEEEEEETTEEEEEECCTTS---CEEEEEETTTCCEEEEEEC-------------CTTCCEEEEEEETTEEEEEESS
T ss_pred ccccccEEEECCEEEEECCCCCC---ceEEEEECCCCCEEEEEeC-------------CCCcceeEEEEeCCEEEEEEee
Confidence 34556788889999999995443 6799999999877654332 4556778888899999998654
Q ss_pred CCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCC
Q 006645 265 TKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVP 344 (637)
Q Consensus 265 ~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~ 344 (637)
.+.+++||+.+.+-..--+ .+..+.+++.-+++||+.-| .+.|+++|+.|.+-..--..+..
T Consensus 84 ------~~~v~v~D~~tl~~~~ti~-----~~~~Gwglt~dg~~L~vSdg-------s~~l~~iDp~t~~~~~~I~V~~~ 145 (243)
T 3mbr_X 84 ------NHEGFVYDLATLTPRARFR-----YPGEGWALTSDDSHLYMSDG-------TAVIRKLDPDTLQQVGSIKVTAG 145 (243)
T ss_dssp ------SSEEEEEETTTTEEEEEEE-----CSSCCCEEEECSSCEEEECS-------SSEEEEECTTTCCEEEEEECEET
T ss_pred ------CCEEEEEECCcCcEEEEEe-----CCCCceEEeeCCCEEEEECC-------CCeEEEEeCCCCeEEEEEEEccC
Confidence 3579999999877554422 22356777766778998754 36799999999765433222222
Q ss_pred CCccccc-EEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEe
Q 006645 345 PSPRSDH-AAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSR 388 (637)
Q Consensus 345 p~~r~~h-~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~ 388 (637)
+.+...- -+..+ ++.||+---. .++|.+.|+.++.-..
T Consensus 146 g~~~~~lNeLe~~-~G~lyanvw~-----s~~I~vIDp~tG~V~~ 184 (243)
T 3mbr_X 146 GRPLDNLNELEWV-NGELLANVWL-----TSRIARIDPASGKVVA 184 (243)
T ss_dssp TEECCCEEEEEEE-TTEEEEEETT-----TTEEEEECTTTCBEEE
T ss_pred CcccccceeeEEe-CCEEEEEECC-----CCeEEEEECCCCCEEE
Confidence 3332222 23333 6778865422 4689999999987543
No 30
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.98 E-value=0.0026 Score=65.00 Aligned_cols=210 Identities=9% Similarity=0.022 Sum_probs=122.9
Q ss_pred CCCCCcceeEEEECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEE-eCCEEEE
Q 006645 182 RPKARYEHGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIP-WENKLLS 260 (637)
Q Consensus 182 ~p~~R~~~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~-~~~~lyv 260 (637)
.+.+...+.++..++++|+.... .+.+.++|+.|++-...-+.. .. -+.++. -+++||+
T Consensus 40 ~~lg~~~~~i~~~~~~lyv~~~~-----~~~v~viD~~t~~~~~~i~~~------------~~---p~~i~~~~~g~lyv 99 (328)
T 3dsm_A 40 FKLGDVAQSMVIRDGIGWIVVNN-----SHVIFAIDINTFKEVGRITGF------------TS---PRYIHFLSDEKAYV 99 (328)
T ss_dssp SCCBSCEEEEEEETTEEEEEEGG-----GTEEEEEETTTCCEEEEEECC------------SS---EEEEEEEETTEEEE
T ss_pred cccCccceEEEEECCEEEEEEcC-----CCEEEEEECcccEEEEEcCCC------------CC---CcEEEEeCCCeEEE
Confidence 35556667788889999998752 357999999998763321110 11 123333 5789999
Q ss_pred EEccCCCCCcceeEEEEECCCCceEeeccCCCCC-CCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEec
Q 006645 261 IAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPP-VSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEID 339 (637)
Q Consensus 261 ~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p-~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~ 339 (637)
.... .+.+.++|+.+++-...-+.+... ....-..++..+++||+..-. ..+.|.++|+.+.+....-
T Consensus 100 ~~~~------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~-----~~~~v~viD~~t~~~~~~i 168 (328)
T 3dsm_A 100 TQIW------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS-----YQNRILKIDTETDKVVDEL 168 (328)
T ss_dssp EEBS------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT-----TCCEEEEEETTTTEEEEEE
T ss_pred EECC------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC-----CCCEEEEEECCCCeEEEEE
Confidence 8753 247999999998765332222210 000112344478899998520 2467999999998765433
Q ss_pred CCCCCCCcccccEEEEEcCCEEEEEeCCCCCCC-----cCcEEEEECCCCeeEecccCCCCCCCCcccEEEEECCccccc
Q 006645 340 AVGVPPSPRSDHAAAVHAERYLLIFGGGSHAAC-----FNDLHVLDLQTMEWSRPTQQGEIPTPRAGHAGVTIGENWFLG 414 (637)
Q Consensus 340 ~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~-----~~dl~~~d~~t~~W~~l~~~~~~p~~R~~hs~~~~~~~~yiG 414 (637)
..+. .| +.+++..++.+|+......... .+.++++|+.+.+....- ..+.....+.++.-.+
T Consensus 169 ~~g~--~p---~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~---~~~~g~~p~~la~~~d----- 235 (328)
T 3dsm_A 169 TIGI--QP---TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQF---KFKLGDWPSEVQLNGT----- 235 (328)
T ss_dssp ECSS--CB---CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEE---ECCTTCCCEEEEECTT-----
T ss_pred EcCC--Cc---cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEE---ecCCCCCceeEEEecC-----
Confidence 2222 22 3445555677877753221111 267999999988765321 1222222233333221
Q ss_pred eeeeeeccCCCCEEEEEcCCCCCCcccEEEEeCCCCcc
Q 006645 415 LSLVVSSYSGEDVIVAFGGYNGRYNNEVHVLKPSHKST 452 (637)
Q Consensus 415 ~s~~~~~~~g~~~l~v~GG~~~~~~~~v~~~d~~~~~~ 452 (637)
...||+..+ .++++|+.+...
T Consensus 236 ----------~~~lyv~~~-------~v~~~d~~t~~~ 256 (328)
T 3dsm_A 236 ----------RDTLYWINN-------DIWRMPVEADRV 256 (328)
T ss_dssp ----------SCEEEEESS-------SEEEEETTCSSC
T ss_pred ----------CCEEEEEcc-------EEEEEECCCCce
Confidence 337888654 789999987654
No 31
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.82 E-value=0.0022 Score=62.91 Aligned_cols=162 Identities=14% Similarity=0.070 Sum_probs=104.8
Q ss_pred cceeEEEECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCC
Q 006645 187 YEHGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTK 266 (637)
Q Consensus 187 ~~~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~ 266 (637)
+-......++.||+..|..+ .+.+.++|+.|++-..-.+. +...++.+++..+++||+....
T Consensus 44 ftqGL~~~~~~LyestG~~g---~S~v~~vD~~Tgkv~~~~~l-------------~~~~FgeGit~~g~~ly~ltw~-- 105 (262)
T 3nol_A 44 FTEGFFYRNGYFYESTGLNG---RSSIRKVDIESGKTLQQIEL-------------GKRYFGEGISDWKDKIVGLTWK-- 105 (262)
T ss_dssp EEEEEEEETTEEEEEEEETT---EEEEEEECTTTCCEEEEEEC-------------CTTCCEEEEEEETTEEEEEESS--
T ss_pred ccceEEEECCEEEEECCCCC---CceEEEEECCCCcEEEEEec-------------CCccceeEEEEeCCEEEEEEee--
Confidence 34566666899999998544 25789999999876554332 3455667788889999999654
Q ss_pred CCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCC
Q 006645 267 DPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPS 346 (637)
Q Consensus 267 ~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~ 346 (637)
.+.+++||+.+.+-..--+ .+-.+.+++.-++.||+.-| .+.++.+|+.|.+-..--..+..+.
T Consensus 106 ----~~~v~v~D~~t~~~~~ti~-----~~~eG~glt~dg~~L~~SdG-------s~~i~~iDp~T~~v~~~I~V~~~g~ 169 (262)
T 3nol_A 106 ----NGLGFVWNIRNLRQVRSFN-----YDGEGWGLTHNDQYLIMSDG-------TPVLRFLDPESLTPVRTITVTAHGE 169 (262)
T ss_dssp ----SSEEEEEETTTCCEEEEEE-----CSSCCCCEEECSSCEEECCS-------SSEEEEECTTTCSEEEEEECEETTE
T ss_pred ----CCEEEEEECccCcEEEEEE-----CCCCceEEecCCCEEEEECC-------CCeEEEEcCCCCeEEEEEEeccCCc
Confidence 3579999999877554322 22255666666778888654 3679999999876543321111111
Q ss_pred ccccc-EEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEe
Q 006645 347 PRSDH-AAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSR 388 (637)
Q Consensus 347 ~r~~h-~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~ 388 (637)
+...- -+... ++.||+--- ..++|.+.|+.++.-..
T Consensus 170 ~~~~lNELe~~-~G~lyan~w-----~~~~I~vIDp~tG~V~~ 206 (262)
T 3nol_A 170 ELPELNELEWV-DGEIFANVW-----QTNKIVRIDPETGKVTG 206 (262)
T ss_dssp ECCCEEEEEEE-TTEEEEEET-----TSSEEEEECTTTCBEEE
T ss_pred cccccceeEEE-CCEEEEEEc-----cCCeEEEEECCCCcEEE
Confidence 21111 13344 677886432 24689999999987544
No 32
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.71 E-value=0.003 Score=62.09 Aligned_cols=159 Identities=13% Similarity=0.014 Sum_probs=104.4
Q ss_pred cceeEEEECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCC
Q 006645 187 YEHGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTK 266 (637)
Q Consensus 187 ~~~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~ 266 (637)
+..+....++.||+..|..+. +.++|+.|++-..-. . +...++.+++..+++||+....
T Consensus 56 ftqGL~~~~~~Ly~stG~~g~-----v~~iD~~Tgkv~~~~-l-------------~~~~FgeGit~~g~~Ly~ltw~-- 114 (268)
T 3nok_A 56 FTQGLVFHQGHFFESTGHQGT-----LRQLSLESAQPVWME-R-------------LGNIFAEGLASDGERLYQLTWT-- 114 (268)
T ss_dssp CEEEEEEETTEEEEEETTTTE-----EEECCSSCSSCSEEE-E-------------CTTCCEEEEEECSSCEEEEESS--
T ss_pred ccceEEEECCEEEEEcCCCCE-----EEEEECCCCcEEeEE-C-------------CCCcceeEEEEeCCEEEEEEcc--
Confidence 446777779999999995432 889999998654432 2 3344667788889999998654
Q ss_pred CCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCC
Q 006645 267 DPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPS 346 (637)
Q Consensus 267 ~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~ 346 (637)
.+.+++||+.+.+-..--+ .+-.+.+++.-+++||+.-| .+.++.+|+.|.+-..--..+..+.
T Consensus 115 ----~~~v~V~D~~Tl~~~~ti~-----~~~eGwGLt~Dg~~L~vSdG-------s~~l~~iDp~T~~v~~~I~V~~~g~ 178 (268)
T 3nok_A 115 ----EGLLFTWSGMPPQRERTTR-----YSGEGWGLCYWNGKLVRSDG-------GTMLTFHEPDGFALVGAVQVKLRGQ 178 (268)
T ss_dssp ----SCEEEEEETTTTEEEEEEE-----CSSCCCCEEEETTEEEEECS-------SSEEEEECTTTCCEEEEEECEETTE
T ss_pred ----CCEEEEEECCcCcEEEEEe-----CCCceeEEecCCCEEEEECC-------CCEEEEEcCCCCeEEEEEEeCCCCc
Confidence 3579999999877554422 12345677777889999765 4679999999976543322212222
Q ss_pred ccccc-EEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEe
Q 006645 347 PRSDH-AAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSR 388 (637)
Q Consensus 347 ~r~~h-~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~ 388 (637)
+...- -+... ++.||+--- ..++|.+.|+.++.-..
T Consensus 179 ~v~~lNeLe~~-dG~lyanvw-----~s~~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 179 PVELINELECA-NGVIYANIW-----HSSDVLEIDPATGTVVG 215 (268)
T ss_dssp ECCCEEEEEEE-TTEEEEEET-----TCSEEEEECTTTCBEEE
T ss_pred ccccccccEEe-CCEEEEEEC-----CCCeEEEEeCCCCcEEE
Confidence 22211 12333 667885332 24689999999886543
No 33
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=97.69 E-value=6.5e-05 Score=71.77 Aligned_cols=70 Identities=24% Similarity=0.221 Sum_probs=59.7
Q ss_pred ccCCCChHHHHHHhhhheeeeeCCCCCC--CCCCCCHh------------hhHHHHHHhcCCCCCHHHHHHHHHHHHHHh
Q 006645 36 LTSKFSNDSALLLYALYQQATVGPCNVP--KPSSWSPV------------EQSKWKSWQGLGNMATTEAMRLFVKILEEE 101 (637)
Q Consensus 36 ~~~~~~~~~~l~ly~l~kqa~~g~~~~~--~p~~~~~~------------~~~k~~aw~~~~~~s~~~a~~~yv~~~~~~ 101 (637)
+.-..+.++.++|.||..||..||++.. .|+.+++. .+..+++|++++|||+++||.+|++++.++
T Consensus 32 g~~~~~~~~a~~Laal~~qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~i~~~~~~~~g~s~~~A~~~yL~~~~~l 111 (206)
T 1mix_A 32 GSHPVSFDKACEFAGYQCQIQFGPHNEQKHKPGFLELKDFLPKEYIKQKGERKIFMAHKNCGNMSEIEAKVRYVKLARSL 111 (206)
T ss_dssp TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGSTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHS
T ss_pred CccccCHHHHHHHHHHhhhheecCCCcccccCCccchHhhCCHHHhhcccHHHHHHHHHHccCCCHHHHHHHHHHHHHhC
Confidence 4567899999999999999999999875 46666654 677899999999999999999999999876
Q ss_pred CCCcc
Q 006645 102 DPGWY 106 (637)
Q Consensus 102 ~~~~~ 106 (637)
|.|.
T Consensus 112 -~~yG 115 (206)
T 1mix_A 112 -KTYG 115 (206)
T ss_dssp -TTTT
T ss_pred -cccC
Confidence 6654
No 34
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.62 E-value=0.011 Score=58.28 Aligned_cols=161 Identities=14% Similarity=-0.014 Sum_probs=101.1
Q ss_pred ceeEEEEC-CEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCC
Q 006645 188 EHGAAVVQ-DKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTK 266 (637)
Q Consensus 188 ~~a~~~~~-~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~ 266 (637)
-+.++..+ +.||+..|..+ .+.+.++|+.|++-...-+. +....+..++..+++||+..-.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg~v~~~i~l-------------~~~~fgeGi~~~g~~lyv~t~~-- 84 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYG---RSSVRQVALQTGKVENIHKM-------------DDSYFGEGLTLLNEKLYQVVWL-- 84 (266)
T ss_dssp EEEEEECSTTEEEEEECSTT---TCEEEEEETTTCCEEEEEEC-------------CTTCCEEEEEEETTEEEEEETT--
T ss_pred cccEEEeCCCeEEEECCCCC---CCEEEEEECCCCCEEEEEec-------------CCCcceEEEEEeCCEEEEEEec--
Confidence 36666666 89999877432 36799999999885543222 2344556677778999998643
Q ss_pred CCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCC
Q 006645 267 DPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPS 346 (637)
Q Consensus 267 ~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~ 346 (637)
.+.+.+||+.+.+=..--+.+ .| .+.+++.-++++|+.-| .+.++++|+.+.+-..--..+..+.
T Consensus 85 ----~~~v~viD~~t~~v~~~i~~g-~~---~g~glt~Dg~~l~vs~g-------s~~l~viD~~t~~v~~~I~Vg~~~~ 149 (266)
T 2iwa_A 85 ----KNIGFIYDRRTLSNIKNFTHQ-MK---DGWGLATDGKILYGSDG-------TSILYEIDPHTFKLIKKHNVKYNGH 149 (266)
T ss_dssp ----CSEEEEEETTTTEEEEEEECC-SS---SCCEEEECSSSEEEECS-------SSEEEEECTTTCCEEEEEECEETTE
T ss_pred ----CCEEEEEECCCCcEEEEEECC-CC---CeEEEEECCCEEEEECC-------CCeEEEEECCCCcEEEEEEECCCCc
Confidence 457999999987643332222 22 23445555678998654 4689999999876443322222222
Q ss_pred ccc-ccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 347 PRS-DHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 347 ~r~-~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
|.. -..+... ++.||+--.. .++|.+.|+.+++-.
T Consensus 150 p~~~~nele~~-dg~lyvn~~~-----~~~V~vID~~tg~V~ 185 (266)
T 2iwa_A 150 RVIRLNELEYI-NGEVWANIWQ-----TDCIARISAKDGTLL 185 (266)
T ss_dssp ECCCEEEEEEE-TTEEEEEETT-----SSEEEEEETTTCCEE
T ss_pred ccccceeEEEE-CCEEEEecCC-----CCeEEEEECCCCcEE
Confidence 221 1133344 6778876432 368999999987643
No 35
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.46 E-value=0.026 Score=57.40 Aligned_cols=208 Identities=10% Similarity=-0.007 Sum_probs=113.5
Q ss_pred eEEE-ECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCC
Q 006645 190 GAAV-VQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDP 268 (637)
Q Consensus 190 a~~~-~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~ 268 (637)
.++. .+++|||.... .+.+.++|+.+++-...-+.+. ..... ..-+.++..+++|||..-.
T Consensus 88 ~i~~~~~g~lyv~~~~-----~~~v~~iD~~t~~~~~~i~~g~--------~~~~~-~~p~~i~~~~~~lyv~~~~---- 149 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQIW-----DYRIFIINPKTYEITGYIECPD--------MDMES-GSTEQMVQYGKYVYVNCWS---- 149 (328)
T ss_dssp EEEEEETTEEEEEEBS-----CSEEEEEETTTTEEEEEEECTT--------CCTTT-CBCCCEEEETTEEEEEECT----
T ss_pred EEEEeCCCeEEEEECC-----CCeEEEEECCCCeEEEEEEcCC--------ccccC-CCcceEEEECCEEEEEcCC----
Confidence 3444 67899998742 3679999999987653322210 00000 0112334478899998521
Q ss_pred CcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE-CCEEEEEeCCCCCCCC----CCceEEEECCCCceEEecCCCC
Q 006645 269 SEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GTSLVIFGGEDAKRSL----LNDLHILDLETMTWDEIDAVGV 343 (637)
Q Consensus 269 ~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~----~n~i~~yd~~t~~W~~~~~~~~ 343 (637)
..+.+.++|+.+++....-..+..| +.++.. ++++|+.......... .+.++++|+.+.+....-..
T Consensus 150 -~~~~v~viD~~t~~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~-- 221 (328)
T 3dsm_A 150 -YQNRILKIDTETDKVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF-- 221 (328)
T ss_dssp -TCCEEEEEETTTTEEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC--
T ss_pred -CCCEEEEEECCCCeEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEec--
Confidence 2347999999998866543333222 122222 5788776532211111 36799999998876533212
Q ss_pred CCCcccccEEEEEc-CCEEEEEeCCCCCCCcCcEEEEECCCCeeEecccCCCCCC-CCcccEEEEECCccccceeeeeec
Q 006645 344 PPSPRSDHAAAVHA-ERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPTQQGEIPT-PRAGHAGVTIGENWFLGLSLVVSS 421 (637)
Q Consensus 344 ~p~~r~~h~~~~~~-~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~~~~~~p~-~R~~hs~~~~~~~~yiG~s~~~~~ 421 (637)
|....-+.+++.. ++.||+..+ .+++||+.+.+..... ..+. ......+++-.
T Consensus 222 -~~g~~p~~la~~~d~~~lyv~~~--------~v~~~d~~t~~~~~~~---~~~~~~~~p~gi~vdp------------- 276 (328)
T 3dsm_A 222 -KLGDWPSEVQLNGTRDTLYWINN--------DIWRMPVEADRVPVRP---FLEFRDTKYYGLTVNP------------- 276 (328)
T ss_dssp -CTTCCCEEEEECTTSCEEEEESS--------SEEEEETTCSSCCSSC---SBCCCSSCEEEEEECT-------------
T ss_pred -CCCCCceeEEEecCCCEEEEEcc--------EEEEEECCCCceeeee---eecCCCCceEEEEEcC-------------
Confidence 2222233455543 567888653 6899999887653211 1111 12222332221
Q ss_pred cCCCCEEEEEcCCCCCCcccEEEEeCCCC
Q 006645 422 YSGEDVIVAFGGYNGRYNNEVHVLKPSHK 450 (637)
Q Consensus 422 ~~g~~~l~v~GG~~~~~~~~v~~~d~~~~ 450 (637)
. +..||+....+-...+.|.+||+...
T Consensus 277 ~--~g~lyva~~~~y~~~~~V~v~d~~g~ 303 (328)
T 3dsm_A 277 N--NGEVYVADAIDYQQQGIVYRYSPQGK 303 (328)
T ss_dssp T--TCCEEEEECTTSSSEEEEEEECTTCC
T ss_pred C--CCeEEEEcccccccCCEEEEECCCCC
Confidence 1 23788876322123567899998743
No 36
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.07 E-value=0.058 Score=52.26 Aligned_cols=118 Identities=19% Similarity=0.138 Sum_probs=83.3
Q ss_pred CcccceEEEeCCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCc
Q 006645 245 PCAGHSLIPWENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLND 324 (637)
Q Consensus 245 ~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~ 324 (637)
.-+-+.....++.||+-.|..+ .+.+..+|+.+++=..-.. +|...++.+++..+++||+.... .+.
T Consensus 20 ~~ftqGL~~~~~~LyestG~~g----~S~v~~vD~~tgkv~~~~~---l~~~~fgeGi~~~~~~ly~ltw~------~~~ 86 (243)
T 3mbr_X 20 TAFTEGLFYLRGHLYESTGETG----RSSVRKVDLETGRILQRAE---VPPPYFGAGIVAWRDRLIQLTWR------NHE 86 (243)
T ss_dssp TCCEEEEEEETTEEEEEECCTT----SCEEEEEETTTCCEEEEEE---CCTTCCEEEEEEETTEEEEEESS------SSE
T ss_pred ccccccEEEECCEEEEECCCCC----CceEEEEECCCCCEEEEEe---CCCCcceeEEEEeCCEEEEEEee------CCE
Confidence 3444567777899999999754 3579999999988665543 45556677788889999998653 578
Q ss_pred eEEEECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 325 LHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 325 i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
+++||+.|.+-..--+ .+..+.+++. .++.||+.-|. +.++.+|+.+..-.
T Consensus 87 v~v~D~~tl~~~~ti~-----~~~~Gwglt~-dg~~L~vSdgs------~~l~~iDp~t~~~~ 137 (243)
T 3mbr_X 87 GFVYDLATLTPRARFR-----YPGEGWALTS-DDSHLYMSDGT------AVIRKLDPDTLQQV 137 (243)
T ss_dssp EEEEETTTTEEEEEEE-----CSSCCCEEEE-CSSCEEEECSS------SEEEEECTTTCCEE
T ss_pred EEEEECCcCcEEEEEe-----CCCCceEEee-CCCEEEEECCC------CeEEEEeCCCCeEE
Confidence 9999998876543221 1224455554 46678887652 56999999987643
No 37
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.96 E-value=0.12 Score=54.38 Aligned_cols=159 Identities=18% Similarity=0.232 Sum_probs=83.2
Q ss_pred EEEeCCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEEC
Q 006645 251 LIPWENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDL 330 (637)
Q Consensus 251 ~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~ 330 (637)
++.+++..++.|+.++ .+.+||+.++.-...-. .......+...++.+++.|+.+ +.+.+||+
T Consensus 284 ~~~~~~~~l~~~~~d~------~i~i~d~~~~~~~~~~~-----~~~~~v~~~~~~~~~l~~~~~d------g~i~vwd~ 346 (445)
T 2ovr_B 284 SLQFDGIHVVSGSLDT------SIRVWDVETGNCIHTLT-----GHQSLTSGMELKDNILVSGNAD------STVKIWDI 346 (445)
T ss_dssp EEEECSSEEEEEETTS------CEEEEETTTCCEEEEEC-----CCCSCEEEEEEETTEEEEEETT------SCEEEEET
T ss_pred EEEECCCEEEEEeCCC------eEEEEECCCCCEEEEEc-----CCcccEEEEEEeCCEEEEEeCC------CeEEEEEC
Confidence 4444777777777654 48899988776433211 1112223334455566677643 45899999
Q ss_pred CCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecccCCCCCCCCcccEEEEECCc
Q 006645 331 ETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPTQQGEIPTPRAGHAGVTIGEN 410 (637)
Q Consensus 331 ~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~~~~~~p~~R~~hs~~~~~~~ 410 (637)
.+.+-...-.. .......-.++.+.++ +++.|+.+ ..+.+||+.+......-. .. ....|...+.
T Consensus 347 ~~~~~~~~~~~--~~~~~~~v~~~~~~~~-~l~s~~~d-----g~v~iwd~~~~~~~~~~~--~~--~~~~~~~~v~--- 411 (445)
T 2ovr_B 347 KTGQCLQTLQG--PNKHQSAVTCLQFNKN-FVITSSDD-----GTVKLWDLKTGEFIRNLV--TL--ESGGSGGVVW--- 411 (445)
T ss_dssp TTCCEEEEECS--TTSCSSCEEEEEECSS-EEEEEETT-----SEEEEEETTTCCEEEEEE--EC--TTGGGTCEEE---
T ss_pred CCCcEEEEEcc--CCCCCCCEEEEEECCC-EEEEEeCC-----CeEEEEECCCCceeeeee--cc--ccCCCCceEE---
Confidence 77654322111 0011111222333344 67777653 358999998876543210 00 0011111111
Q ss_pred cccceeeeeeccCCCCEEEEEcCCCCCCcccEEEEeCCC
Q 006645 411 WFLGLSLVVSSYSGEDVIVAFGGYNGRYNNEVHVLKPSH 449 (637)
Q Consensus 411 ~yiG~s~~~~~~~g~~~l~v~GG~~~~~~~~v~~~d~~~ 449 (637)
++ ..+....++++|+.+|.....+++||...
T Consensus 412 -----~~---~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 412 -----RI---RASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp -----EE---EECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred -----EE---EecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 00 11113378889998887667788888654
No 38
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=96.78 E-value=0.014 Score=47.85 Aligned_cols=74 Identities=16% Similarity=0.170 Sum_probs=56.5
Q ss_pred HHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHh
Q 006645 515 LIATLKAEKEELESSLSKEKLQSIQLKQDLTEAES---QNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQT 588 (637)
Q Consensus 515 ~~~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~---~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~ 588 (637)
.+..|.......++.+..++.++..|++++..++. +++-+++|...++..+..|+.--.++..++.+|+++|..
T Consensus 25 ei~~L~~~L~~AEeaL~~Kq~~idelk~ei~q~~~~lE~I~vLkaQv~IY~~DF~aERadREkl~~eKe~L~~ql~~ 101 (110)
T 2v4h_A 25 QLEDLRQQLQQAEEALVAKQELIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQ 101 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchhhHHHHHhHHHHHHHHHHH
Confidence 46678888889999999999999999998888777 666788888888888877766555566666665555443
No 39
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=96.71 E-value=0.068 Score=46.36 Aligned_cols=75 Identities=23% Similarity=0.360 Sum_probs=46.6
Q ss_pred HHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHh
Q 006645 514 HLIATLKAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQT 588 (637)
Q Consensus 514 ~~~~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~ 588 (637)
..+..+.++...++..+...+.....|..+...+..+...+..+|+.-+..+...++++..|.....+|..++..
T Consensus 13 ~E~~~~~eel~~lke~l~k~e~~r~ele~~~~~l~~Ek~~L~~qL~~E~~~l~e~EE~~~~L~~~k~eLe~~l~e 87 (129)
T 2fxo_A 13 KEMASMKEEFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKE 87 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666666666666666666666666666666666666777766666666666665555555555554444
No 40
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.59 E-value=0.8 Score=46.82 Aligned_cols=177 Identities=14% Similarity=0.116 Sum_probs=94.3
Q ss_pred eEEecccCCCCCCCCcceeEEEECCEEEEEcccCCCcccCcEEEEEccCC--eEEEeeecccccCCCCCCCCCCCCcccc
Q 006645 172 QWIAPPISGQRPKARYEHGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSW--AWSKIQAKAVAESTESPSPALLTPCAGH 249 (637)
Q Consensus 172 ~W~~~~~~g~~p~~R~~~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~~~~~~~~~~~p~~r~~h 249 (637)
.|......+.. ......+.++.++.||+... ...++.||..++ .|+.-..... ............
T Consensus 31 ~W~~~~~~~~~-~~~~~~~p~v~~~~v~~~~~------~g~v~a~d~~tG~~~W~~~~~~~~------~~~~~~~~~~~~ 97 (376)
T 3q7m_A 31 AWSTSVGSGIG-NFYSNLHPALADNVVYAADR------AGLVKALNADDGKEIWSVSLAEKD------GWFSKEPALLSG 97 (376)
T ss_dssp EEEECCTTTTT-TSCCCCCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC---------CCSCCCCCEEE
T ss_pred EeEEecCCCcc-ccceeeccEEECCEEEEEcC------CCeEEEEEccCCceeeeecCcccc------ccccccCccccc
Confidence 78865432110 01122356778999999865 247999999875 4765422110 000000122233
Q ss_pred eEEEeCCEEEEEEccCCCCCcceeEEEEECCCCc--eEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEE
Q 006645 250 SLIPWENKLLSIAGHTKDPSEIIQVKVFDLQTCS--WSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHI 327 (637)
Q Consensus 250 s~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~ 327 (637)
+.+..++.||+.... ..+++||+.+++ |...... . ...+.+..++.+|+..+ ...++.
T Consensus 98 ~~~~~~~~v~v~~~~-------g~l~a~d~~tG~~~W~~~~~~-----~-~~~~p~~~~~~v~v~~~-------~g~l~~ 157 (376)
T 3q7m_A 98 GVTVSGGHVYIGSEK-------AQVYALNTSDGTVAWQTKVAG-----E-ALSRPVVSDGLVLIHTS-------NGQLQA 157 (376)
T ss_dssp EEEEETTEEEEEETT-------SEEEEEETTTCCEEEEEECSS-----C-CCSCCEEETTEEEEECT-------TSEEEE
T ss_pred CceEeCCEEEEEcCC-------CEEEEEECCCCCEEEEEeCCC-----c-eEcCCEEECCEEEEEcC-------CCeEEE
Confidence 445568888885432 369999998765 7665321 1 11223455777777432 246999
Q ss_pred EECCCCc--eEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCC--eeEec
Q 006645 328 LDLETMT--WDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTM--EWSRP 389 (637)
Q Consensus 328 yd~~t~~--W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~--~W~~l 389 (637)
||+.+.+ |....... ....+...+.++ .++.+|+ |..+ ..++.||+.++ .|+.-
T Consensus 158 ~d~~tG~~~W~~~~~~~-~~~~~~~~~~~~-~~~~v~~-g~~~-----g~l~~~d~~tG~~~w~~~ 215 (376)
T 3q7m_A 158 LNEADGAVKWTVNLDMP-SLSLRGESAPTT-AFGAAVV-GGDN-----GRVSAVLMEQGQMIWQQR 215 (376)
T ss_dssp EETTTCCEEEEEECCC------CCCCCCEE-ETTEEEE-CCTT-----TEEEEEETTTCCEEEEEE
T ss_pred EECCCCcEEEEEeCCCC-ceeecCCCCcEE-ECCEEEE-EcCC-----CEEEEEECCCCcEEEEEe
Confidence 9998765 87654221 111111222333 3665555 4321 35899998765 47653
No 41
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.49 E-value=0.12 Score=53.09 Aligned_cols=146 Identities=15% Similarity=0.169 Sum_probs=83.8
Q ss_pred CEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe-C-CEEEEEEccCCCCCccee
Q 006645 196 DKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW-E-NKLLSIAGHTKDPSEIIQ 273 (637)
Q Consensus 196 ~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~-~-~~lyv~GG~~~~~~~~~~ 273 (637)
+.+|+.|+.+ +.+.++|+.+++-...-.. ... -++++.. + .+||+.|+.+ ..
T Consensus 2 ~~l~vs~~~d-----~~v~v~d~~~~~~~~~~~~-------------~~~--~~~~~~s~dg~~l~~~~~~d------~~ 55 (391)
T 1l0q_A 2 TFAYIANSES-----DNISVIDVTSNKVTATIPV-------------GSN--PMGAVISPDGTKVYVANAHS------ND 55 (391)
T ss_dssp EEEEEEETTT-----TEEEEEETTTTEEEEEEEC-------------SSS--EEEEEECTTSSEEEEEEGGG------TE
T ss_pred CEEEEEcCCC-----CEEEEEECCCCeEEEEeec-------------CCC--cceEEECCCCCEEEEECCCC------Ce
Confidence 4677777632 3689999998865543221 111 1222222 3 4677777653 36
Q ss_pred EEEEECCCCceEeeccCCCCCCCCCceEEEEE---CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccc
Q 006645 274 VKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV---GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSD 350 (637)
Q Consensus 274 v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~ 350 (637)
+.+||+.+++....-..+ . ....+.+ +..||+.|.. .+.|++||+.+.+.......+ ...
T Consensus 56 i~v~d~~~~~~~~~~~~~-----~-~v~~~~~spdg~~l~~~~~~------~~~v~v~d~~~~~~~~~~~~~-----~~~ 118 (391)
T 1l0q_A 56 VSIIDTATNNVIATVPAG-----S-SPQGVAVSPDGKQVYVTNMA------SSTLSVIDTTSNTVAGTVKTG-----KSP 118 (391)
T ss_dssp EEEEETTTTEEEEEEECS-----S-SEEEEEECTTSSEEEEEETT------TTEEEEEETTTTEEEEEEECS-----SSE
T ss_pred EEEEECCCCeEEEEEECC-----C-CccceEECCCCCEEEEEECC------CCEEEEEECCCCeEEEEEeCC-----CCc
Confidence 899999988765543311 1 2222333 3456666543 256999999988765443221 122
Q ss_pred cEEEEEcC-CEEEEEeCCCCCCCcCcEEEEECCCCeeEec
Q 006645 351 HAAAVHAE-RYLLIFGGGSHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 351 h~~~~~~~-~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l 389 (637)
.++++..+ +.||+.++.+ +.+++||+.+......
T Consensus 119 ~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~ 153 (391)
T 1l0q_A 119 LGLALSPDGKKLYVTNNGD-----KTVSVINTVTKAVINT 153 (391)
T ss_dssp EEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEE
T ss_pred ceEEECCCCCEEEEEeCCC-----CEEEEEECCCCcEEEE
Confidence 34444433 4576776543 4689999988876543
No 42
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.34 E-value=0.23 Score=51.76 Aligned_cols=143 Identities=16% Similarity=0.092 Sum_probs=80.3
Q ss_pred cEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe-CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccC
Q 006645 212 DMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW-ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTY 290 (637)
Q Consensus 212 ~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~ 290 (637)
.++.+|+.+..+..+.... .+..-++++.. ++.+|+.++.+. .+.+||+.+++.......
T Consensus 102 ~l~~~d~~~~~~~~~~~~~-------------~~~~~~~~~~s~~~~~~~~~~~~~------~i~~~d~~~g~~~~~~~~ 162 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFK-------------TGFQPKSVRFIDNTRLAIPLLEDE------GMDVLDINSGQTVRLSPP 162 (433)
T ss_dssp CEEECCBTTCSEEEEEEEE-------------CSSCBCCCEESSSSEEEEEBTTSS------SEEEEETTTCCEEEECCC
T ss_pred EEEEECCCCCcceEEEEEc-------------CCCCceEEEEeCCCeEEEEeCCCC------eEEEEECCCCeEeeecCc
Confidence 6888998877666655432 11111122222 678888776532 489999998887654321
Q ss_pred CCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEEEEc-CCEEEEEeCC
Q 006645 291 GKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHA-ERYLLIFGGG 367 (637)
Q Consensus 291 g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~-~~~l~v~GG~ 367 (637)
+..........++.+ ++.+|+.|+.+ +.+.+||+.+.+....-.. ....-.++++.. ++.+|+.++.
T Consensus 163 ~~~~~~~~~v~~~~~~~~~~~~~s~~~d------~~v~~~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~ 232 (433)
T 3bws_A 163 EKYKKKLGFVETISIPEHNELWVSQMQA------NAVHVFDLKTLAYKATVDL----TGKWSKILLYDPIRDLVYCSNWI 232 (433)
T ss_dssp HHHHTTCCEEEEEEEGGGTEEEEEEGGG------TEEEEEETTTCCEEEEEEC----SSSSEEEEEEETTTTEEEEEETT
T ss_pred ccccccCCceeEEEEcCCCEEEEEECCC------CEEEEEECCCceEEEEEcC----CCCCeeEEEEcCCCCEEEEEecC
Confidence 111111222233344 67888888743 4689999987654332211 111223344443 4556666653
Q ss_pred CCCCCcCcEEEEECCCCeeEe
Q 006645 368 SHAACFNDLHVLDLQTMEWSR 388 (637)
Q Consensus 368 ~~~~~~~dl~~~d~~t~~W~~ 388 (637)
+ ..+.+||+.+.....
T Consensus 233 ~-----~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 233 S-----EDISVIDRKTKLEIR 248 (433)
T ss_dssp T-----TEEEEEETTTTEEEE
T ss_pred C-----CcEEEEECCCCcEEE
Confidence 3 368999998876644
No 43
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=96.30 E-value=0.098 Score=43.17 Aligned_cols=69 Identities=14% Similarity=0.147 Sum_probs=31.1
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 006645 519 LKAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQ 587 (637)
Q Consensus 519 l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq 587 (637)
++..+..++.+.........+++.++.+.+....+++.++.++++.++.-+....+.+..+.+.+++|+
T Consensus 7 IKkKm~~lk~e~e~a~drae~~e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~kLe 75 (101)
T 3u1c_A 7 IKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLL 75 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444445555555555555555555555544443333333333334444433333
No 44
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.27 E-value=0.26 Score=48.19 Aligned_cols=114 Identities=9% Similarity=0.026 Sum_probs=78.4
Q ss_pred ceEEEeCCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEE
Q 006645 249 HSLIPWENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHIL 328 (637)
Q Consensus 249 hs~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~y 328 (637)
......++.||+..|..+ .+.+..+|+.|++-..--+ ++...++.+++..+++||+.... .+.+++|
T Consensus 46 qGL~~~~~~LyestG~~g----~S~v~~vD~~Tgkv~~~~~---l~~~~FgeGit~~g~~ly~ltw~------~~~v~v~ 112 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG----RSSIRKVDIESGKTLQQIE---LGKRYFGEGISDWKDKIVGLTWK------NGLGFVW 112 (262)
T ss_dssp EEEEEETTEEEEEEEETT----EEEEEEECTTTCCEEEEEE---CCTTCCEEEEEEETTEEEEEESS------SSEEEEE
T ss_pred ceEEEECCEEEEECCCCC----CceEEEEECCCCcEEEEEe---cCCccceeEEEEeCCEEEEEEee------CCEEEEE
Confidence 445555889999999754 3579999999988655443 44445566788889999998653 4779999
Q ss_pred ECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 329 DLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 329 d~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
|+.+.+-..--+. +-.+.+++. .++.||+.-| .+.++.+|+.+..-.
T Consensus 113 D~~t~~~~~ti~~-----~~eG~glt~-dg~~L~~SdG------s~~i~~iDp~T~~v~ 159 (262)
T 3nol_A 113 NIRNLRQVRSFNY-----DGEGWGLTH-NDQYLIMSDG------TPVLRFLDPESLTPV 159 (262)
T ss_dssp ETTTCCEEEEEEC-----SSCCCCEEE-CSSCEEECCS------SSEEEEECTTTCSEE
T ss_pred ECccCcEEEEEEC-----CCCceEEec-CCCEEEEECC------CCeEEEEcCCCCeEE
Confidence 9998765432211 123445554 4566888654 256999999986543
No 45
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=96.24 E-value=0.052 Score=60.29 Aligned_cols=18 Identities=22% Similarity=0.281 Sum_probs=7.2
Q ss_pred hhhhhHHHHHHHHHHHHh
Q 006645 571 RCFKLEVDVAELRQKLQT 588 (637)
Q Consensus 571 ~~~~le~~~~el~~~lq~ 588 (637)
..+++++++.++++++++
T Consensus 538 ~~~~~~~~~~~le~~~~~ 555 (597)
T 3oja_B 538 ETEDLEQENIALEKQLDN 555 (597)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred chhhHHhhhHHHHHHHhh
Confidence 333344444444444333
No 46
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.18 E-value=0.25 Score=51.91 Aligned_cols=150 Identities=11% Similarity=0.184 Sum_probs=83.2
Q ss_pred EEEECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCc
Q 006645 191 AAVVQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSE 270 (637)
Q Consensus 191 ~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~ 270 (637)
+...++..++.|+.+ +.+.+||..+.+-...-. .......++.+++.+++.|+.++
T Consensus 138 ~~~~d~~~l~~g~~d-----g~i~iwd~~~~~~~~~~~---------------~h~~~v~~l~~~~~~l~sg~~dg---- 193 (435)
T 1p22_A 138 CLQYDDQKIVSGLRD-----NTIKIWDKNTLECKRILT---------------GHTGSVLCLQYDERVIITGSSDS---- 193 (435)
T ss_dssp EEECCSSEEEEEESS-----SCEEEEESSSCCEEEEEC---------------CCSSCEEEEECCSSEEEEEETTS----
T ss_pred EEEECCCEEEEEeCC-----CeEEEEeCCCCeEEEEEc---------------CCCCcEEEEEECCCEEEEEcCCC----
Confidence 334467777777743 358899988866443311 11122344555788888888754
Q ss_pred ceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEe-cCCCCCCCccc
Q 006645 271 IIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEI-DAVGVPPSPRS 349 (637)
Q Consensus 271 ~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~-~~~~~~p~~r~ 349 (637)
.+.+||+.++.-...-. .......+..+.+.+++.|+.+ +.+.+||+.+..-... ... .....
T Consensus 194 --~i~vwd~~~~~~~~~~~-----~h~~~v~~l~~~~~~l~s~s~d------g~i~vwd~~~~~~~~~~~~~---~~~~~ 257 (435)
T 1p22_A 194 --TVRVWDVNTGEMLNTLI-----HHCEAVLHLRFNNGMMVTCSKD------RSIAVWDMASPTDITLRRVL---VGHRA 257 (435)
T ss_dssp --CEEEEESSSCCEEEEEC-----CCCSCEEEEECCTTEEEEEETT------SCEEEEECSSSSCCEEEEEE---CCCSS
T ss_pred --eEEEEECCCCcEEEEEc-----CCCCcEEEEEEcCCEEEEeeCC------CcEEEEeCCCCCCceeeeEe---cCCCC
Confidence 48899998876543321 1122233444456677777753 4588999876543211 100 01111
Q ss_pred ccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCee
Q 006645 350 DHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEW 386 (637)
Q Consensus 350 ~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W 386 (637)
...++...++ .++.|+.+ ..+.+||+.+..-
T Consensus 258 ~v~~~~~~~~-~l~s~~~d-----g~i~vwd~~~~~~ 288 (435)
T 1p22_A 258 AVNVVDFDDK-YIVSASGD-----RTIKVWNTSTCEF 288 (435)
T ss_dssp CEEEEEEETT-EEEEEETT-----SEEEEEETTTCCE
T ss_pred cEEEEEeCCC-EEEEEeCC-----CeEEEEECCcCcE
Confidence 1222333455 55666543 3588899887654
No 47
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=96.10 E-value=0.048 Score=64.34 Aligned_cols=12 Identities=17% Similarity=0.315 Sum_probs=6.1
Q ss_pred CCCCHHHHHHHH
Q 006645 83 GNMATTEAMRLF 94 (637)
Q Consensus 83 ~~~s~~~a~~~y 94 (637)
=|++.+|-+.-|
T Consensus 315 lg~~~~e~~~i~ 326 (1080)
T 2dfs_A 315 LGISDSYQMGIF 326 (1080)
T ss_dssp TTCCHHHHHHHH
T ss_pred cCCCHHHHHHHH
Confidence 356655544444
No 48
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.05 E-value=0.3 Score=49.37 Aligned_cols=106 Identities=10% Similarity=0.194 Sum_probs=62.7
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--C--CEEEEEEccCCCCCc
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--E--NKLLSIAGHTKDPSE 270 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~--~~lyv~GG~~~~~~~ 270 (637)
++.+++.|+.+ ..+.+||+.+..+..+.... .......++.+ + +.+++.|+.++
T Consensus 22 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~-------------~h~~~v~~~~~~~~~~~~~l~s~~~dg---- 79 (379)
T 3jrp_A 22 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLT-------------GHEGPVWRVDWAHPKFGTILASCSYDG---- 79 (379)
T ss_dssp SSSEEEEEETT-----SCEEEEEEETTEEEEEEEEC-------------CCSSCEEEEEECCGGGCSEEEEEETTS----
T ss_pred CCCEEEEEECC-----CcEEEEecCCCcceeeeEec-------------CCCCcEEEEEeCCCCCCCEEEEeccCC----
Confidence 35566666643 35888898877776665432 11112223333 2 67777777654
Q ss_pred ceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--C--CEEEEEeCCCCCCCCCCceEEEECCCC
Q 006645 271 IIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--G--TSLVIFGGEDAKRSLLNDLHILDLETM 333 (637)
Q Consensus 271 ~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~n~i~~yd~~t~ 333 (637)
.+.+||+.++.|..+... ........++.+ + +.+++.|+.+ ..+.+||+.+.
T Consensus 80 --~v~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~ 135 (379)
T 3jrp_A 80 --KVLIWKEENGRWSQIAVH---AVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKEN 135 (379)
T ss_dssp --CEEEEEEETTEEEEEEEE---CCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCTT
T ss_pred --EEEEEEcCCCceeEeeee---cCCCcceEEEEeCCCCCCCEEEEecCC------CcEEEEecCCC
Confidence 488999999988776542 212222333333 2 5677777653 45888988766
No 49
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.02 E-value=1.6 Score=44.57 Aligned_cols=153 Identities=13% Similarity=0.162 Sum_probs=84.6
Q ss_pred eEEEECCEEEEEcccCCCcccCcEEEEEccCCe--EEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCC
Q 006645 190 GAAVVQDKMYIYGGNHNGRYLSDMHILDLRSWA--WSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKD 267 (637)
Q Consensus 190 a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~ 267 (637)
+.++.++.||+..+ ...++.||+.+++ |+.-.... ....+...+.+..++.||+ |..
T Consensus 138 ~p~~~~~~v~v~~~------~g~l~~~d~~tG~~~W~~~~~~~-----------~~~~~~~~~~~~~~~~v~~-g~~--- 196 (376)
T 3q7m_A 138 RPVVSDGLVLIHTS------NGQLQALNEADGAVKWTVNLDMP-----------SLSLRGESAPTTAFGAAVV-GGD--- 196 (376)
T ss_dssp CCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC----------------CCCCCCEEETTEEEE-CCT---
T ss_pred CCEEECCEEEEEcC------CCeEEEEECCCCcEEEEEeCCCC-----------ceeecCCCCcEEECCEEEE-EcC---
Confidence 34556888888554 2469999998865 87543211 0111222334445777776 322
Q ss_pred CCcceeEEEEECCCCc--eEeeccC--CCCCCCC---CceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCC--ceEEe
Q 006645 268 PSEIIQVKVFDLQTCS--WSTLKTY--GKPPVSR---GGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETM--TWDEI 338 (637)
Q Consensus 268 ~~~~~~v~~yd~~t~~--W~~~~~~--g~~p~~r---~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~--~W~~~ 338 (637)
...+..||+.+++ |...... +.....+ .....+..++.+|+.+. ...+++||+.+. .|...
T Consensus 197 ---~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~-------~g~l~~~d~~tG~~~w~~~ 266 (376)
T 3q7m_A 197 ---NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY-------NGNLTALDLRSGQIMWKRE 266 (376)
T ss_dssp ---TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT-------TSCEEEEETTTCCEEEEEC
T ss_pred ---CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec-------CcEEEEEECCCCcEEeecc
Confidence 2368999988764 7665321 0000000 12233455778877542 346899999876 47653
Q ss_pred cCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCe--eEe
Q 006645 339 DAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTME--WSR 388 (637)
Q Consensus 339 ~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~--W~~ 388 (637)
. +. .....+.++.||+.... ..++.||+.++. |+.
T Consensus 267 ~-----~~----~~~~~~~~~~l~~~~~~------g~l~~~d~~tG~~~w~~ 303 (376)
T 3q7m_A 267 L-----GS----VNDFIVDGNRIYLVDQN------DRVMALTIDGGVTLWTQ 303 (376)
T ss_dssp C-----CC----EEEEEEETTEEEEEETT------CCEEEEETTTCCEEEEE
T ss_pred C-----CC----CCCceEECCEEEEEcCC------CeEEEEECCCCcEEEee
Confidence 2 11 12233347778886532 358999998765 765
No 50
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=95.99 E-value=1 Score=44.40 Aligned_cols=148 Identities=11% Similarity=0.065 Sum_probs=79.3
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~ 272 (637)
++.+++.||.+ ..+.+||+.+.+-...-.. ... .-.++.+ ++.+++.|+.+.
T Consensus 76 ~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~-------------~~~--~v~~~~~~~~~~~l~s~~~d~------ 129 (312)
T 4ery_A 76 DSNLLVSASDD-----KTLKIWDVSSGKCLKTLKG-------------HSN--YVFCCNFNPQSNLIVSGSFDE------ 129 (312)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTCCEEEEEEC-------------CSS--CEEEEEECSSSSEEEEEETTS------
T ss_pred CCCEEEEECCC-----CEEEEEECCCCcEEEEEcC-------------CCC--CEEEEEEcCCCCEEEEEeCCC------
Confidence 45667777643 3588899888754322110 011 1112222 456777777654
Q ss_pred eEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccc
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSD 350 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~ 350 (637)
.+.+||+.+.+-...-. .......+..+ ++.+++.|+.+ ..+.+||+.+.+........ .....
T Consensus 130 ~i~iwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~---~~~~~ 195 (312)
T 4ery_A 130 SVRIWDVKTGKCLKTLP-----AHSDPVSAVHFNRDGSLIVSSSYD------GLCRIWDTASGQCLKTLIDD---DNPPV 195 (312)
T ss_dssp CEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTCCEEEEECCS---SCCCE
T ss_pred cEEEEECCCCEEEEEec-----CCCCcEEEEEEcCCCCEEEEEeCC------CcEEEEECCCCceeeEEecc---CCCce
Confidence 48899988765433211 11112223333 45677777753 45889999877654322111 11111
Q ss_pred cEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 351 HAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 351 h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
..++...++..++.|+.+ +.+.+||+.+..-.
T Consensus 196 ~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 196 SFVKFSPNGKYILAATLD-----NTLKLWDYSKGKCL 227 (312)
T ss_dssp EEEEECTTSSEEEEEETT-----TEEEEEETTTTEEE
T ss_pred EEEEECCCCCEEEEEcCC-----CeEEEEECCCCcEE
Confidence 223333455566666653 35889999877543
No 51
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.99 E-value=1.1 Score=44.80 Aligned_cols=158 Identities=9% Similarity=-0.031 Sum_probs=82.2
Q ss_pred CCEEEEEcccC-CCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeC-CEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNH-NGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWE-NKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~-~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~-~~lyv~GG~~~~~~~~~ 272 (637)
++.||+..... .....+.++++|+.+.+....-..+ ......++.-+ +++|+.++.+ +
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~--------------~~~~~~~~s~dg~~l~v~~~~~------~ 111 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND--------------LKPFGATINNTTQTLWFGNTVN------S 111 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES--------------SCCCSEEEETTTTEEEEEETTT------T
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC--------------CCcceEEECCCCCEEEEEecCC------C
Confidence 35787765321 1112457999999987654433221 11112222233 4688776642 3
Q ss_pred eEEEEECCCCceEeeccCCCCCC-----CCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCC
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPV-----SRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPP 345 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~-----~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p 345 (637)
.+.+||+.+++-...-..+.... +..-+.++.. ++.+|+.+... .+.+++||+.+.+-...-..
T Consensus 112 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~~~~~~~~~~---- 182 (353)
T 3vgz_A 112 AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDGGNIKLKTAIQN---- 182 (353)
T ss_dssp EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEETTTTEEEEEECC----
T ss_pred EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcCCCCceEEEecC----
Confidence 79999999877533322211111 1111223333 35677766321 24699999987765443221
Q ss_pred CcccccEEEEEc-CCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 346 SPRSDHAAAVHA-ERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 346 ~~r~~h~~~~~~-~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
.....+.+++.. ++.||+... -+.+++||+.+..-.
T Consensus 183 ~~~~~~~~~~s~dg~~l~~~~~------~~~i~~~d~~~~~~~ 219 (353)
T 3vgz_A 183 TGKMSTGLALDSEGKRLYTTNA------DGELITIDTADNKIL 219 (353)
T ss_dssp CCTTCCCCEEETTTTEEEEECT------TSEEEEEETTTTEEE
T ss_pred CCCccceEEECCCCCEEEEEcC------CCeEEEEECCCCeEE
Confidence 111122334443 455666543 246889999887644
No 52
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.97 E-value=0.29 Score=50.11 Aligned_cols=148 Identities=16% Similarity=0.145 Sum_probs=81.0
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~ 272 (637)
+..||+.|.. .+.+.+||+.+++........ ..-.+++.. +..||+.++.+ .
T Consensus 85 g~~l~~~~~~-----~~~v~v~d~~~~~~~~~~~~~---------------~~~~~~~~s~dg~~l~~~~~~~------~ 138 (391)
T 1l0q_A 85 GKQVYVTNMA-----SSTLSVIDTTSNTVAGTVKTG---------------KSPLGLALSPDGKKLYVTNNGD------K 138 (391)
T ss_dssp SSEEEEEETT-----TTEEEEEETTTTEEEEEEECS---------------SSEEEEEECTTSSEEEEEETTT------T
T ss_pred CCEEEEEECC-----CCEEEEEECCCCeEEEEEeCC---------------CCcceEEECCCCCEEEEEeCCC------C
Confidence 4557666542 146999999998765442211 111223322 33677777543 3
Q ss_pred eEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccc
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSD 350 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~ 350 (637)
.+.+||+.+++....-..+.. -..++.. ++.||+.++. .+.+++||+.+......... ...-
T Consensus 139 ~v~~~d~~~~~~~~~~~~~~~-----~~~~~~~~dg~~l~~~~~~------~~~v~~~d~~~~~~~~~~~~-----~~~~ 202 (391)
T 1l0q_A 139 TVSVINTVTKAVINTVSVGRS-----PKGIAVTPDGTKVYVANFD------SMSISVIDTVTNSVIDTVKV-----EAAP 202 (391)
T ss_dssp EEEEEETTTTEEEEEEECCSS-----EEEEEECTTSSEEEEEETT------TTEEEEEETTTTEEEEEEEC-----SSEE
T ss_pred EEEEEECCCCcEEEEEecCCC-----cceEEECCCCCEEEEEeCC------CCEEEEEECCCCeEEEEEec-----CCCc
Confidence 699999998876655332211 1222222 3467777654 25699999988765544321 1112
Q ss_pred cEEEEEcC-CEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 351 HAAAVHAE-RYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 351 h~~~~~~~-~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
.++++..+ ..|++.+... .-..+.+||+.+..-.
T Consensus 203 ~~~~~~~~g~~l~~~~~~~---~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 203 SGIAVNPEGTKAYVTNVDK---YFNTVSMIDTGTNKIT 237 (391)
T ss_dssp EEEEECTTSSEEEEEEECS---SCCEEEEEETTTTEEE
T ss_pred cceEECCCCCEEEEEecCc---CCCcEEEEECCCCeEE
Confidence 23334334 4455544210 1256899999877543
No 53
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.95 E-value=1.4 Score=43.94 Aligned_cols=200 Identities=11% Similarity=0.008 Sum_probs=99.9
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~ 272 (637)
++.+|+.++.. +.+++||+.+++-...-..+... .+....+..-+.++.. ++++|+.+... ..
T Consensus 100 g~~l~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~ 164 (353)
T 3vgz_A 100 TQTLWFGNTVN-----SAVTAIDAKTGEVKGRLVLDDRK-----RTEEVRPLQPRELVADDATNTVYISGIGK-----ES 164 (353)
T ss_dssp TTEEEEEETTT-----TEEEEEETTTCCEEEEEESCCCC-----CCSSCCCCEEEEEEEETTTTEEEEEEESS-----SC
T ss_pred CCEEEEEecCC-----CEEEEEeCCCCeeEEEEecCCCc-----cccccCCCCCceEEECCCCCEEEEEecCC-----Cc
Confidence 35688876532 37899999987653332221000 0000011111223332 45677776322 23
Q ss_pred eEEEEECCCCceEeecc-CCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCccc
Q 006645 273 QVKVFDLQTCSWSTLKT-YGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRS 349 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~-~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~ 349 (637)
.+++||+.+.+-...-+ .+.. -+.++.. ++.||+... .+.+++||+.+.+-......+.......
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~~-------~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 232 (353)
T 3vgz_A 165 VIWVVDGGNIKLKTAIQNTGKM-----STGLALDSEGKRLYTTNA-------DGELITIDTADNKILSRKKLLDDGKEHF 232 (353)
T ss_dssp EEEEEETTTTEEEEEECCCCTT-----CCCCEEETTTTEEEEECT-------TSEEEEEETTTTEEEEEEECCCSSSCCC
T ss_pred eEEEEcCCCCceEEEecCCCCc-----cceEEECCCCCEEEEEcC-------CCeEEEEECCCCeEEEEEEcCCCCCCcc
Confidence 69999998876544322 1211 1222332 346666543 3578899998876443322211111122
Q ss_pred ccEEEEEc-CCEEEEEeCCCCCCCcCcEEEEECCCCeeEecccCCCCCCCCcccEEEEECCccccceeeeeeccCCCCEE
Q 006645 350 DHAAAVHA-ERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPTQQGEIPTPRAGHAGVTIGENWFLGLSLVVSSYSGEDVI 428 (637)
Q Consensus 350 ~h~~~~~~-~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~~~~~~p~~R~~hs~~~~~~~~yiG~s~~~~~~~g~~~l 428 (637)
..++++.. ++.||+.+.. .+.+++||+.+......... +.+ ...+...+ +..+
T Consensus 233 ~~~~~~s~dg~~l~~~~~~-----~~~v~~~d~~~~~~~~~~~~---~~~---~~~~~s~d---------------g~~l 286 (353)
T 3vgz_A 233 FINISLDTARQRAFITDSK-----AAEVLVVDTRNGNILAKVAA---PES---LAVLFNPA---------------RNEA 286 (353)
T ss_dssp EEEEEEETTTTEEEEEESS-----SSEEEEEETTTCCEEEEEEC---SSC---CCEEEETT---------------TTEE
T ss_pred cceEEECCCCCEEEEEeCC-----CCEEEEEECCCCcEEEEEEc---CCC---ceEEECCC---------------CCEE
Confidence 22344443 4567666532 25699999988765443211 111 12222222 2367
Q ss_pred EEEcCCCCCCcccEEEEeCCCCc
Q 006645 429 VAFGGYNGRYNNEVHVLKPSHKS 451 (637)
Q Consensus 429 ~v~GG~~~~~~~~v~~~d~~~~~ 451 (637)
|+.+..+ +.+.++|+.+..
T Consensus 287 ~v~~~~~----~~v~~~d~~~~~ 305 (353)
T 3vgz_A 287 YVTHRQA----GKVSVIDAKSYK 305 (353)
T ss_dssp EEEETTT----TEEEEEETTTTE
T ss_pred EEEECCC----CeEEEEECCCCe
Confidence 7765433 478889987653
No 54
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=95.95 E-value=0.38 Score=41.62 Aligned_cols=100 Identities=16% Similarity=0.153 Sum_probs=48.4
Q ss_pred HHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhHH----
Q 006645 515 LIATLKAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQTME---- 590 (637)
Q Consensus 515 ~~~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~~q---- 590 (637)
.+..|++.....+..+.+.+....++.++...+..+++.....+.+.+..+.....+..+|+.++.++..++.+.+
T Consensus 21 el~~lke~l~k~e~~r~ele~~~~~l~~Ek~~L~~qL~~E~~~l~e~EE~~~~L~~~k~eLe~~l~el~~rleeeee~~~ 100 (129)
T 2fxo_A 21 EFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMNKRLEDEEEMNA 100 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444444444444444444433333333333333334444566666666666666533
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 006645 591 TLQKELELLQRQKAASEQAALNAK 614 (637)
Q Consensus 591 ~~~~e~~~~~~~~~~~~~~~~~~~ 614 (637)
++..+-..++.+.+.+..++.+.+
T Consensus 101 ~L~~~kkkle~e~~~Lk~~led~e 124 (129)
T 2fxo_A 101 ELTAKKRKLEDECSELKRDIDDLE 124 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344455555566666665544
No 55
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=95.93 E-value=0.3 Score=49.34 Aligned_cols=151 Identities=11% Similarity=0.124 Sum_probs=81.3
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcceeE
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQV 274 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v 274 (637)
++.++++|+.+ +.+.+||+.+..|..+..... ...........-++.+++.|+.+. .+
T Consensus 19 ~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~-----------h~~~v~~~~~~~~~~~l~~~~~dg------~i 76 (372)
T 1k8k_C 19 DRTQIAICPNN-----HEVHIYEKSGNKWVQVHELKE-----------HNGQVTGVDWAPDSNRIVTCGTDR------NA 76 (372)
T ss_dssp TSSEEEEECSS-----SEEEEEEEETTEEEEEEEEEC-----------CSSCEEEEEEETTTTEEEEEETTS------CE
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCCcEEeeeeecC-----------CCCcccEEEEeCCCCEEEEEcCCC------eE
Confidence 45667777642 468999999998766655420 111111111122566777777543 48
Q ss_pred EEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCc-eEEecCCCCCCCccccc
Q 006645 275 KVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMT-WDEIDAVGVPPSPRSDH 351 (637)
Q Consensus 275 ~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~-W~~~~~~~~~p~~r~~h 351 (637)
.+||+.+..+...... ........++.+ ++.+++.|+.+ ..+.+||+.+.. |....... .+....-.
T Consensus 77 ~vwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d------~~v~i~d~~~~~~~~~~~~~~-~~~~~~i~ 146 (372)
T 1k8k_C 77 YVWTLKGRTWKPTLVI---LRINRAARCVRWAPNEKKFAVGSGS------RVISICYFEQENDWWVCKHIK-KPIRSTVL 146 (372)
T ss_dssp EEEEEETTEEEEEEEC---CCCSSCEEEEEECTTSSEEEEEETT------SSEEEEEEETTTTEEEEEEEC-TTCCSCEE
T ss_pred EEEECCCCeeeeeEEe---ecCCCceeEEEECCCCCEEEEEeCC------CEEEEEEecCCCcceeeeeee-cccCCCee
Confidence 8899988887665431 111222233333 45677777653 347777776554 33322110 11122223
Q ss_pred EEEEEcCCEEEEEeCCCCCCCcCcEEEEECC
Q 006645 352 AAAVHAERYLLIFGGGSHAACFNDLHVLDLQ 382 (637)
Q Consensus 352 ~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~ 382 (637)
+++...++.+++.|+.+ ..+.+||+.
T Consensus 147 ~~~~~~~~~~l~~~~~d-----g~i~~~d~~ 172 (372)
T 1k8k_C 147 SLDWHPNSVLLAAGSCD-----FKCRIFSAY 172 (372)
T ss_dssp EEEECTTSSEEEEEETT-----SCEEEEECC
T ss_pred EEEEcCCCCEEEEEcCC-----CCEEEEEcc
Confidence 44444456677777754 357888864
No 56
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=95.92 E-value=0.02 Score=68.79 Aligned_cols=34 Identities=15% Similarity=0.125 Sum_probs=13.3
Q ss_pred HHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Q 006645 516 IATLKAEKEELESSLSKEKLQSIQLKQDLTEAES 549 (637)
Q Consensus 516 ~~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~ 549 (637)
+..++++.+++++.+.+.+..+..++.++..++.
T Consensus 859 l~~L~~eL~el~~~L~~le~~l~ele~~l~~Le~ 892 (1184)
T 1i84_S 859 MQAKDEELQRTKERQQKAEAELKELEQKHTQLCE 892 (1184)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444433333333333333333
No 57
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=95.84 E-value=0.9 Score=46.88 Aligned_cols=137 Identities=12% Similarity=0.117 Sum_probs=76.2
Q ss_pred CcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcceeEEEEECCCCceEeec
Q 006645 211 SDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLK 288 (637)
Q Consensus 211 ~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 288 (637)
+.+.+||..++......... ......++.+ ++.+++.|+.++ .+.+||+.+......-
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~--------------~~~~v~~v~~s~~~~~l~~~~~dg------~i~iwd~~~~~~~~~~ 172 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETD--------------ESTYVASVKWSHDGSFLSVGLGNG------LVDIYDVESQTKLRTM 172 (401)
T ss_dssp TEEEEEETTTCCEEEEEECC--------------TTCCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEEEEE
T ss_pred CeEEEeeCCCCcEeEeeecC--------------CCCCEEEEEECCCCCEEEEECCCC------eEEEEECcCCeEEEEe
Confidence 35888999888776554321 1111223333 566777777643 5889998887644432
Q ss_pred cCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCC
Q 006645 289 TYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGS 368 (637)
Q Consensus 289 ~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~ 368 (637)
. .......++..++.+++.|+.+ ..+.+||+.+..-...... .....-.+++...++.+++.|+.+
T Consensus 173 ~-----~~~~~v~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~d 238 (401)
T 4aez_A 173 A-----GHQARVGCLSWNRHVLSSGSRS------GAIHHHDVRIANHQIGTLQ---GHSSEVCGLAWRSDGLQLASGGND 238 (401)
T ss_dssp C-----CCSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEE---CCSSCEEEEEECTTSSEEEEEETT
T ss_pred c-----CCCCceEEEEECCCEEEEEcCC------CCEEEEecccCcceeeEEc---CCCCCeeEEEEcCCCCEEEEEeCC
Confidence 1 1222333444566777777753 4688999874332111111 111122234444455677777754
Q ss_pred CCCCcCcEEEEECCCCee
Q 006645 369 HAACFNDLHVLDLQTMEW 386 (637)
Q Consensus 369 ~~~~~~dl~~~d~~t~~W 386 (637)
..+.+||+.+..-
T Consensus 239 -----~~v~iwd~~~~~~ 251 (401)
T 4aez_A 239 -----NVVQIWDARSSIP 251 (401)
T ss_dssp -----SCEEEEETTCSSE
T ss_pred -----CeEEEccCCCCCc
Confidence 3588999887543
No 58
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=95.82 E-value=0.22 Score=41.11 Aligned_cols=9 Identities=44% Similarity=0.637 Sum_probs=3.4
Q ss_pred HHhHHHHHH
Q 006645 516 IATLKAEKE 524 (637)
Q Consensus 516 ~~~l~~~~~ 524 (637)
++.|+.+..
T Consensus 11 m~~lk~e~e 19 (101)
T 3u1c_A 11 MQMLKLDKE 19 (101)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333333333
No 59
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=95.78 E-value=0.27 Score=43.86 Aligned_cols=49 Identities=14% Similarity=0.167 Sum_probs=24.8
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 006645 539 QLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQ 587 (637)
Q Consensus 539 ~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq 587 (637)
.|+..+..++.....+++++..++.+|.++++-..+-.+.+.+++-+++
T Consensus 52 ELq~~~~~L~~~k~~Leke~~~LQa~L~qEr~~r~q~se~~~elq~ri~ 100 (168)
T 3o0z_A 52 ELQERNRILENSKSQTDKDYYQLQAILEAERRDRGHDSEMIGDLQARIT 100 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444445566667777777776665444333333333333333
No 60
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=95.77 E-value=0.028 Score=67.59 Aligned_cols=34 Identities=15% Similarity=0.200 Sum_probs=13.5
Q ss_pred HHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Q 006645 516 IATLKAEKEELESSLSKEKLQSIQLKQDLTEAES 549 (637)
Q Consensus 516 ~~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~ 549 (637)
+..+++....++..+.+.+.+...|++++.+++.
T Consensus 866 L~el~~~L~~le~~l~ele~~l~~Le~e~~~l~~ 899 (1184)
T 1i84_S 866 LQRTKERQQKAEAELKELEQKHTQLCEEKNLLQE 899 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334443334444444444444444433333333
No 61
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=95.76 E-value=0.2 Score=41.38 Aligned_cols=67 Identities=21% Similarity=0.217 Sum_probs=29.4
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Q 006645 519 LKAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQK 585 (637)
Q Consensus 519 l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~ 585 (637)
++..+..++...........+++.++.+.+....+++.++..+++.++.-+......+..+.+.+++
T Consensus 7 iKkKm~~lk~e~e~a~d~ae~~e~~~k~~e~~~~~~E~ei~sL~kKiq~lE~eld~~~e~l~~a~~k 73 (101)
T 3u59_A 7 IKKKMQMLKLDKENAIDRAEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEDEVEKYSESVKEAQEK 73 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444444445555555555555555555555444433333333333333333333
No 62
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=95.76 E-value=0.3 Score=44.76 Aligned_cols=8 Identities=25% Similarity=0.322 Sum_probs=2.9
Q ss_pred HHhhhhhH
Q 006645 525 ELESSLSK 532 (637)
Q Consensus 525 ~le~~~~e 532 (637)
+++..+.+
T Consensus 28 ~le~El~E 35 (189)
T 2v71_A 28 EARDELVE 35 (189)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 63
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=95.72 E-value=0.089 Score=54.93 Aligned_cols=23 Identities=17% Similarity=0.101 Sum_probs=9.8
Q ss_pred HHhHHHHHHHHhhhhhHHHHHHH
Q 006645 516 IATLKAEKEELESSLSKEKLQSI 538 (637)
Q Consensus 516 ~~~l~~~~~~le~~~~e~~~~~~ 538 (637)
|..|+.+.+++++...++.+.++
T Consensus 66 INELKnqLEdlsKnsKdseqy~k 88 (562)
T 3ghg_A 66 INKLKNSLFEYQKNNKDSHSLTT 88 (562)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhchhHHHHHH
Confidence 34444444444444444444333
No 64
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.69 E-value=0.78 Score=47.59 Aligned_cols=152 Identities=11% Similarity=0.051 Sum_probs=81.0
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~ 272 (637)
++.+|+.|+.+ ..+.+||+.+.+....-.. ....-.+++.. +..+|+.++.+ .
T Consensus 180 ~~~~~~s~~~d-----~~v~~~d~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~l~~~~~~~------~ 234 (433)
T 3bws_A 180 HNELWVSQMQA-----NAVHVFDLKTLAYKATVDL--------------TGKWSKILLYDPIRDLVYCSNWIS------E 234 (433)
T ss_dssp GTEEEEEEGGG-----TEEEEEETTTCCEEEEEEC--------------SSSSEEEEEEETTTTEEEEEETTT------T
T ss_pred CCEEEEEECCC-----CEEEEEECCCceEEEEEcC--------------CCCCeeEEEEcCCCCEEEEEecCC------C
Confidence 67888887632 4689999988654432111 11111122222 34677776543 2
Q ss_pred eEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCC--CCCceEEEECCCCceEEecCCCCCCCcc
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRS--LLNDLHILDLETMTWDEIDAVGVPPSPR 348 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~--~~n~i~~yd~~t~~W~~~~~~~~~p~~r 348 (637)
.+.+||+.+++....-. ... ....+.+ ++..+++++...... --+.|++||+.+.+-...... +.
T Consensus 235 ~i~~~d~~~~~~~~~~~-----~~~-~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~-----~~ 303 (433)
T 3bws_A 235 DISVIDRKTKLEIRKTD-----KIG-LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP-----PG 303 (433)
T ss_dssp EEEEEETTTTEEEEECC-----CCS-EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE-----EE
T ss_pred cEEEEECCCCcEEEEec-----CCC-CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccC-----CC
Confidence 68999999887654422 111 1222333 344444444322211 124789999988755433211 11
Q ss_pred cccEEEEEcC-CEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 349 SDHAAAVHAE-RYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 349 ~~h~~~~~~~-~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
...+++...+ +.+|+.++.+ +.+.+||+.+..-.
T Consensus 304 ~~~~~~~~~~g~~l~~~~~~~-----~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 304 NKRHIVSGNTENKIYVSDMCC-----SKIEVYDLKEKKVQ 338 (433)
T ss_dssp CEEEEEECSSTTEEEEEETTT-----TEEEEEETTTTEEE
T ss_pred CcceEEECCCCCEEEEEecCC-----CEEEEEECCCCcEE
Confidence 1123333333 4688876643 46899999876544
No 65
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=95.67 E-value=0.066 Score=63.19 Aligned_cols=16 Identities=25% Similarity=0.383 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHHHHH
Q 006645 592 LQKELELLQRQKAASE 607 (637)
Q Consensus 592 ~~~e~~~~~~~~~~~~ 607 (637)
|++|.+.|++|+.+++
T Consensus 1028 L~~e~~~L~qq~~~l~ 1043 (1080)
T 2dfs_A 1028 LKEQNTLLKTEKEELN 1043 (1080)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333333333333333
No 66
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=95.66 E-value=0.12 Score=57.23 Aligned_cols=27 Identities=19% Similarity=0.275 Sum_probs=11.1
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 006645 519 LKAEKEELESSLSKEKLQSIQLKQDLT 545 (637)
Q Consensus 519 l~~~~~~le~~~~e~~~~~~~l~~~l~ 545 (637)
++.+.+.+++++.+.+...+.++++++
T Consensus 461 ~~~~i~~l~~~~~~~~~~l~~~~~~i~ 487 (597)
T 3oja_B 461 LRAEVQQLTNEQIQQEQLLQGLHAEID 487 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 333333444444444444444444443
No 67
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.66 E-value=0.71 Score=45.63 Aligned_cols=148 Identities=16% Similarity=0.124 Sum_probs=80.7
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~ 272 (637)
++.+++.|+.+ ..+.+||+.+.+........ .......++.+ ++.+++.|+.++
T Consensus 108 ~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~-------------~~~~~i~~~~~~~~~~~l~~~~~dg------ 163 (337)
T 1gxr_A 108 DGCTLIVGGEA-----STLSIWDLAAPTPRIKAELT-------------SSAPACYALAISPDSKVCFSCCSDG------ 163 (337)
T ss_dssp TSSEEEEEESS-----SEEEEEECCCC--EEEEEEE-------------CSSSCEEEEEECTTSSEEEEEETTS------
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCCcceeeecc-------------cCCCceEEEEECCCCCEEEEEeCCC------
Confidence 45566666532 36889999988755443321 11111122222 556777777643
Q ss_pred eEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccc
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSD 350 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~ 350 (637)
.+.+||+.+.+....-. .......+..+ ++..++.|+.+ ..+.+||+.+..-...... ...-
T Consensus 164 ~v~~~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~-----~~~v 227 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQ-----GHTDGASCIDISNDGTKLWTGGLD------NTVRSWDLREGRQLQQHDF-----TSQI 227 (337)
T ss_dssp CEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEEC-----SSCE
T ss_pred cEEEEeCCCCceeeeee-----cccCceEEEEECCCCCEEEEEecC------CcEEEEECCCCceEeeecC-----CCce
Confidence 48899998876544322 11122233333 45666777642 4689999987654333211 1122
Q ss_pred cEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 351 HAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 351 h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
.+++...++.++++|+.+ ..+.+||+.+..-.
T Consensus 228 ~~~~~s~~~~~l~~~~~~-----~~i~~~~~~~~~~~ 259 (337)
T 1gxr_A 228 FSLGYCPTGEWLAVGMES-----SNVEVLHVNKPDKY 259 (337)
T ss_dssp EEEEECTTSSEEEEEETT-----SCEEEEETTSSCEE
T ss_pred EEEEECCCCCEEEEEcCC-----CcEEEEECCCCCeE
Confidence 344444556677777643 35889998876543
No 68
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.59 E-value=0.41 Score=50.17 Aligned_cols=195 Identities=12% Similarity=0.113 Sum_probs=103.8
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CC-EEEEEEccCCCCCcc
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--EN-KLLSIAGHTKDPSEI 271 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~-~lyv~GG~~~~~~~~ 271 (637)
+++.+++++..++ ...++++|+.+++...+... .. ...++.+ ++ +|++.+..+. .
T Consensus 189 dg~~la~~s~~~~--~~~i~~~d~~tg~~~~l~~~--------------~~--~~~~~~~spdg~~la~~~~~~g----~ 246 (415)
T 2hqs_A 189 DGSKLAYVTFESG--RSALVIQTLANGAVRQVASF--------------PR--HNGAPAFSPDGSKLAFALSKTG----S 246 (415)
T ss_dssp TSSEEEEEECTTS--SCEEEEEETTTCCEEEEECC--------------SS--CEEEEEECTTSSEEEEEECTTS----S
T ss_pred CCCEEEEEEecCC--CcEEEEEECCCCcEEEeecC--------------CC--cccCEEEcCCCCEEEEEEecCC----C
Confidence 4555555554332 25799999999887665321 11 1222333 44 4555554322 3
Q ss_pred eeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCccc
Q 006645 272 IQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRS 349 (637)
Q Consensus 272 ~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~ 349 (637)
..++.+|+.++....+... + .......+ +++.+++++.... ...|+++|+.+..-..+... ...
T Consensus 247 ~~i~~~d~~~~~~~~l~~~---~---~~~~~~~~spdg~~l~~~s~~~g---~~~i~~~d~~~~~~~~l~~~-----~~~ 312 (415)
T 2hqs_A 247 LNLYVMDLASGQIRQVTDG---R---SNNTEPTWFPDSQNLAFTSDQAG---RPQVYKVNINGGAPQRITWE-----GSQ 312 (415)
T ss_dssp CEEEEEETTTCCEEECCCC---S---SCEEEEEECTTSSEEEEEECTTS---SCEEEEEETTSSCCEECCCS-----SSE
T ss_pred ceEEEEECCCCCEEeCcCC---C---CcccceEECCCCCEEEEEECCCC---CcEEEEEECCCCCEEEEecC-----CCc
Confidence 4799999999887655321 1 12223333 4554455443211 34699999988776554321 122
Q ss_pred ccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecccCCCCCCCCcccEEEEECCccccceeeeeeccCCCCEEE
Q 006645 350 DHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPTQQGEIPTPRAGHAGVTIGENWFLGLSLVVSSYSGEDVIV 429 (637)
Q Consensus 350 ~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~~~~~~p~~R~~hs~~~~~~~~yiG~s~~~~~~~g~~~l~ 429 (637)
..+.+...++..+++++.... ...++++|+.+.....+... . ......+. .+| ..+
T Consensus 313 ~~~~~~spdG~~l~~~~~~~g--~~~i~~~d~~~~~~~~l~~~-----~--~~~~~~~s-------------pdg--~~l 368 (415)
T 2hqs_A 313 NQDADVSSDGKFMVMVSSNGG--QQHIAKQDLATGGVQVLSST-----F--LDETPSLA-------------PNG--TMV 368 (415)
T ss_dssp EEEEEECTTSSEEEEEEECSS--CEEEEEEETTTCCEEECCCS-----S--SCEEEEEC-------------TTS--SEE
T ss_pred ccCeEECCCCCEEEEEECcCC--ceEEEEEECCCCCEEEecCC-----C--CcCCeEEc-------------CCC--CEE
Confidence 223444445545555543321 24699999999887665311 1 22222222 122 556
Q ss_pred EEcCCCCCCcccEEEEeCCCC
Q 006645 430 AFGGYNGRYNNEVHVLKPSHK 450 (637)
Q Consensus 430 v~GG~~~~~~~~v~~~d~~~~ 450 (637)
++++.++. ...++++|+...
T Consensus 369 ~~~s~~~~-~~~l~~~d~~g~ 388 (415)
T 2hqs_A 369 IYSSSQGM-GSVLNLVSTDGR 388 (415)
T ss_dssp EEEEEETT-EEEEEEEETTSC
T ss_pred EEEEcCCC-ccEEEEEECCCC
Confidence 66654322 347889987654
No 69
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.59 E-value=1.2 Score=43.70 Aligned_cols=115 Identities=20% Similarity=0.064 Sum_probs=74.7
Q ss_pred ceEEEeC-CEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEE
Q 006645 249 HSLIPWE-NKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHI 327 (637)
Q Consensus 249 hs~v~~~-~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~ 327 (637)
+.++..+ +.||+..|... .+.+.++|+.+++=..--+ .+...++.+++..+++||+..-. .+.+++
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~----~s~v~~iD~~tg~v~~~i~---l~~~~fgeGi~~~g~~lyv~t~~------~~~v~v 90 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG----RSSVRQVALQTGKVENIHK---MDDSYFGEGLTLLNEKLYQVVWL------KNIGFI 90 (266)
T ss_dssp EEEEECSTTEEEEEECSTT----TCEEEEEETTTCCEEEEEE---CCTTCCEEEEEEETTEEEEEETT------CSEEEE
T ss_pred ccEEEeCCCeEEEECCCCC----CCEEEEEECCCCCEEEEEe---cCCCcceEEEEEeCCEEEEEEec------CCEEEE
Confidence 5555555 79999888522 3579999999988655433 23334555677788999998642 467999
Q ss_pred EECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 328 LDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 328 yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
||+.+.+=..--+.+ .|. +.+++. .++++|+.-| .+.++.+|+.+..-.
T Consensus 91 iD~~t~~v~~~i~~g-~~~---g~glt~-Dg~~l~vs~g------s~~l~viD~~t~~v~ 139 (266)
T 2iwa_A 91 YDRRTLSNIKNFTHQ-MKD---GWGLAT-DGKILYGSDG------TSILYEIDPHTFKLI 139 (266)
T ss_dssp EETTTTEEEEEEECC-SSS---CCEEEE-CSSSEEEECS------SSEEEEECTTTCCEE
T ss_pred EECCCCcEEEEEECC-CCC---eEEEEE-CCCEEEEECC------CCeEEEEECCCCcEE
Confidence 999876543222222 122 233443 4667888754 357999999886543
No 70
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.48 E-value=0.38 Score=55.05 Aligned_cols=156 Identities=10% Similarity=0.039 Sum_probs=88.1
Q ss_pred CcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe-CCEEEEEEccCCCCCcceeEEEEECCCCceEeecc
Q 006645 211 SDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW-ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKT 289 (637)
Q Consensus 211 ~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~ 289 (637)
+.+++||+.+.+|....... ....+.... .+++.. ++.|++-. .. ..+++||+.+.++.....
T Consensus 469 ~Gl~~~~~~~~~~~~~~~~~--------~~~~~~~~i-~~i~~d~~g~lWigt-~~------~Gl~~~~~~~~~~~~~~~ 532 (781)
T 3v9f_A 469 AGVFVIDLASKKVIHHYDTS--------NSQLLENFV-RSIAQDSEGRFWIGT-FG------GGVGIYTPDMQLVRKFNQ 532 (781)
T ss_dssp TEEEEEESSSSSCCEEECTT--------TSSCSCSCE-EEEEECTTCCEEEEE-SS------SCEEEECTTCCEEEEECT
T ss_pred CceEEEeCCCCeEEecccCc--------cccccccee-EEEEEcCCCCEEEEE-cC------CCEEEEeCCCCeEEEccC
Confidence 35899999999887764321 001111111 122222 56777643 21 138899999999888754
Q ss_pred CCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCce-EEEECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeC
Q 006645 290 YGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDL-HILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGG 366 (637)
Q Consensus 290 ~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i-~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG 366 (637)
...+|. ....+... ++.|++-.. +-+ ++||+.+.++.........|... .++++...++.|++.+.
T Consensus 533 ~~~l~~--~~i~~i~~d~~g~lWi~T~--------~Glv~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g~lW~~t~ 601 (781)
T 3v9f_A 533 YEGFCS--NTINQIYRSSKGQMWLATG--------EGLVCFPSARNFDYQVFQRKEGLPNTH-IRAISEDKNGNIWASTN 601 (781)
T ss_dssp TTTCSC--SCEEEEEECTTSCEEEEET--------TEEEEESCTTTCCCEEECGGGTCSCCC-CCEEEECSSSCEEEECS
T ss_pred CCCCCC--CeeEEEEECCCCCEEEEEC--------CCceEEECCCCCcEEEccccCCCCCce-EEEEEECCCCCEEEEcC
Confidence 222322 11222222 456766432 236 89999999888775432233333 24555555666777642
Q ss_pred CCCCCCcCcEEEEECCCCeeEecccCCCCCCCCc
Q 006645 367 GSHAACFNDLHVLDLQTMEWSRPTQQGEIPTPRA 400 (637)
Q Consensus 367 ~~~~~~~~dl~~~d~~t~~W~~l~~~~~~p~~R~ 400 (637)
+.+.+||+.+..+.......-++..-+
T Consensus 602 -------~Gl~~~~~~~~~~~~~~~~dGl~~~~f 628 (781)
T 3v9f_A 602 -------TGISCYITSKKCFYTYDHSNNIPQGSF 628 (781)
T ss_dssp -------SCEEEEETTTTEEEEECGGGTCCSSCE
T ss_pred -------CceEEEECCCCceEEecccCCcccccc
Confidence 348999999998887653323444433
No 71
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=95.41 E-value=0.13 Score=40.91 Aligned_cols=72 Identities=17% Similarity=0.178 Sum_probs=51.3
Q ss_pred HhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHh
Q 006645 517 ATLKAEKEELESSLSKEKLQSIQLKQDLTEAE---SQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQT 588 (637)
Q Consensus 517 ~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e---~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~ 588 (637)
..|.......++.+..++.++..|++.+...+ ++++-+++|...++..+..|+.--.++..+..+|++++..
T Consensus 5 ~~L~~~L~~aEeaL~~kq~~id~lke~~~q~~~~~E~i~vLk~Qv~IY~~DF~aERadREkl~~eKe~L~~ql~~ 79 (94)
T 3jsv_C 5 EDLRQQLQQAEEALVAKQELIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQ 79 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 44666677788888888888888888887776 5666778888888888877765545555555555544443
No 72
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=95.40 E-value=0.28 Score=38.66 Aligned_cols=57 Identities=19% Similarity=0.263 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006645 556 KELQSVRGQLAAEQSRCFKLEVDVAELRQKLQTMETLQKELELLQRQKAASEQAALNAKR 615 (637)
Q Consensus 556 ~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~~q~~~~e~~~~~~~~~~~~~~~~~~~r 615 (637)
..+...+.++.+.+.+..+++.++..|+++++.++ .+++.+++++......|.+++.
T Consensus 20 ~~~~~~e~~l~~~e~~~~~~E~ev~~L~kKiq~lE---~eld~~ee~l~~a~~kLeeaek 76 (81)
T 1ic2_A 20 DRAEQAEADKKAAEERSKQLEDELVALQKKLKGTE---DELDKYSESLKDAQEKLELADK 76 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444444444455566666666666665533 3444455555555555555543
No 73
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.31 E-value=0.38 Score=48.56 Aligned_cols=149 Identities=14% Similarity=0.130 Sum_probs=80.1
Q ss_pred CEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--C--CEEEEEEccCCCCCcc
Q 006645 196 DKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--E--NKLLSIAGHTKDPSEI 271 (637)
Q Consensus 196 ~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~--~~lyv~GG~~~~~~~~ 271 (637)
+.+++.|+.+ ..+.+||+.+++|..+.... .......++.+ + +.+++.|+.+.
T Consensus 69 ~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~~~l~~~~~d~----- 125 (379)
T 3jrp_A 69 GTILASCSYD-----GKVLIWKEENGRWSQIAVHA-------------VHSASVNSVQWAPHEYGPLLLVASSDG----- 125 (379)
T ss_dssp CSEEEEEETT-----SCEEEEEEETTEEEEEEEEC-------------CCSSCEEEEEECCGGGCSEEEEEETTS-----
T ss_pred CCEEEEeccC-----CEEEEEEcCCCceeEeeeec-------------CCCcceEEEEeCCCCCCCEEEEecCCC-----
Confidence 5667777643 35889999999987775542 11112233333 3 56777777643
Q ss_pred eeEEEEECCCCceEeeccCCCCCCCCCceEEEEE---------------CCEEEEEeCCCCCCCCCCceEEEECCCCc--
Q 006645 272 IQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV---------------GTSLVIFGGEDAKRSLLNDLHILDLETMT-- 334 (637)
Q Consensus 272 ~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---------------~~~lyv~GG~~~~~~~~n~i~~yd~~t~~-- 334 (637)
.+.+||+.+..-..... .........+..+ ++.+++.|+.+ ..|.+||+.+..
T Consensus 126 -~i~v~d~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~ 195 (379)
T 3jrp_A 126 -KVSVVEFKENGTTSPII---IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD------NLVKIWKYNSDAQT 195 (379)
T ss_dssp -EEEEEECCTTSCCCEEE---EECCTTCEEEEEECCCC----------CTTCEEEEEETT------SCEEEEEEETTTTE
T ss_pred -cEEEEecCCCCceeeEE---ecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCC------CeEEEEEecCCCcc
Confidence 58888887763221111 0000111122222 36777888764 357888876543
Q ss_pred eEEecCCCCCCCcccccEEEEEcC---CEEEEEeCCCCCCCcCcEEEEECCCC
Q 006645 335 WDEIDAVGVPPSPRSDHAAAVHAE---RYLLIFGGGSHAACFNDLHVLDLQTM 384 (637)
Q Consensus 335 W~~~~~~~~~p~~r~~h~~~~~~~---~~l~v~GG~~~~~~~~dl~~~d~~t~ 384 (637)
|..+.... .....-.+++...+ +.+++.|+.++ .+.+||+.+.
T Consensus 196 ~~~~~~~~--~h~~~v~~~~~sp~~~~~~~l~s~~~dg-----~i~iwd~~~~ 241 (379)
T 3jrp_A 196 YVLESTLE--GHSDWVRDVAWSPTVLLRSYLASVSQDR-----TCIIWTQDNE 241 (379)
T ss_dssp EEEEEEEC--CCSSCEEEEEECCCCSSSEEEEEEETTS-----CEEEEEESST
T ss_pred eeeEEEEe--cccCcEeEEEECCCCCCCCeEEEEeCCC-----EEEEEeCCCC
Confidence 44433221 11112234444445 67888887543 4788887765
No 74
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.30 E-value=1.1 Score=46.72 Aligned_cols=149 Identities=13% Similarity=0.216 Sum_probs=80.8
Q ss_pred EECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcce
Q 006645 193 VVQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 193 ~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~ 272 (637)
..++.+++.|+.+ ..+.++|+.+++....-. .......++.+++.+++.|+.++
T Consensus 180 ~~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~~---------------~h~~~v~~l~~~~~~l~s~s~dg------ 233 (435)
T 1p22_A 180 QYDERVIITGSSD-----STVRVWDVNTGEMLNTLI---------------HHCEAVLHLRFNNGMMVTCSKDR------ 233 (435)
T ss_dssp ECCSSEEEEEETT-----SCEEEEESSSCCEEEEEC---------------CCCSCEEEEECCTTEEEEEETTS------
T ss_pred EECCCEEEEEcCC-----CeEEEEECCCCcEEEEEc---------------CCCCcEEEEEEcCCEEEEeeCCC------
Confidence 3467777777743 358899998876433211 11122334445566777777654
Q ss_pred eEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccE
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHA 352 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~ 352 (637)
.+.+||+.+..-...... .........++..++..++.|+.+ ..+.+||+.+..-...-.. .. ....
T Consensus 234 ~i~vwd~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~l~s~~~d------g~i~vwd~~~~~~~~~~~~----~~-~~v~ 300 (435)
T 1p22_A 234 SIAVWDMASPTDITLRRV--LVGHRAAVNVVDFDDKYIVSASGD------RTIKVWNTSTCEFVRTLNG----HK-RGIA 300 (435)
T ss_dssp CEEEEECSSSSCCEEEEE--ECCCSSCEEEEEEETTEEEEEETT------SEEEEEETTTCCEEEEEEC----CS-SCEE
T ss_pred cEEEEeCCCCCCceeeeE--ecCCCCcEEEEEeCCCEEEEEeCC------CeEEEEECCcCcEEEEEcC----CC-CcEE
Confidence 488899877653211100 111122233444466666667653 4588999987654332111 11 1112
Q ss_pred EEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCee
Q 006645 353 AAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEW 386 (637)
Q Consensus 353 ~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W 386 (637)
++...++ +++.|+.+ +.+.+||+.+..-
T Consensus 301 ~~~~~~~-~l~~g~~d-----g~i~iwd~~~~~~ 328 (435)
T 1p22_A 301 CLQYRDR-LVVSGSSD-----NTIRLWDIECGAC 328 (435)
T ss_dssp EEEEETT-EEEEEETT-----SCEEEEETTTCCE
T ss_pred EEEeCCC-EEEEEeCC-----CeEEEEECCCCCE
Confidence 2333444 66777654 3588999987653
No 75
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.29 E-value=5 Score=45.06 Aligned_cols=144 Identities=18% Similarity=0.163 Sum_probs=77.8
Q ss_pred eEEecccCCCCCCCCcceeEEEECCEEEEEcccCCCcccCcEEEEEccCC--eEEEeeecccccCCCCCCCCCCCCcccc
Q 006645 172 QWIAPPISGQRPKARYEHGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSW--AWSKIQAKAVAESTESPSPALLTPCAGH 249 (637)
Q Consensus 172 ~W~~~~~~g~~p~~R~~~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~~~~~~~~~~~p~~r~~h 249 (637)
.|+.....+ .....+-++.++.||+.+. .+.++.+|..|+ .|+.-....... ...........
T Consensus 51 ~W~~~~~~~----~~~~~~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~-----~~~~~~~~~~~ 115 (689)
T 1yiq_A 51 AWSYKLDLD----RGVEATPIVVDGVMYTTGP------FSVVYALDARDGRLIWKYDPQSDRHR-----AGEACCDAVNR 115 (689)
T ss_dssp EEEEECSSC----SCCCCCCEEETTEEEEECG------GGCEEEEETTTCCEEEEECCCCCGGG-----GGGCTTCSCCC
T ss_pred EEEEECCCC----CCceecCEEECCEEEEEcC------CCeEEEEECCCCceeEEEcCCCCccc-----cccccccCCCC
Confidence 788643211 1123445678999999865 356999999885 587542211000 00000001112
Q ss_pred eEEEeCCEEEEEEccCCCCCcceeEEEEECCCCc--eEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEE
Q 006645 250 SLIPWENKLLSIAGHTKDPSEIIQVKVFDLQTCS--WSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHI 327 (637)
Q Consensus 250 s~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~ 327 (637)
+.+..+++||+... ...++.+|..|++ |+...............+.++.++.+|+-.+.. .......++.
T Consensus 116 ~~~~~~g~v~v~~~-------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~-~~~~~g~v~a 187 (689)
T 1yiq_A 116 GVAVWKGKVYVGVL-------DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGA-EFGVRGYVTA 187 (689)
T ss_dssp CCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCT-TTCCBCEEEE
T ss_pred ccEEECCEEEEEcc-------CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCC-ccCCCCEEEE
Confidence 34556888887542 2368999998875 876532010111112223345688887633221 1112467999
Q ss_pred EECCCCc--eEEe
Q 006645 328 LDLETMT--WDEI 338 (637)
Q Consensus 328 yd~~t~~--W~~~ 338 (637)
||..|.+ |+.-
T Consensus 188 ~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 188 YDAETGKEAWRFY 200 (689)
T ss_dssp EETTTCCEEEEEE
T ss_pred EECCCCcEEEEec
Confidence 9998875 8765
No 76
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.29 E-value=3.7 Score=46.03 Aligned_cols=144 Identities=16% Similarity=0.140 Sum_probs=78.8
Q ss_pred eEEecccCCCCCCCCcceeEEEECCEEEEEcccCCCcccCcEEEEEccCC--eEEEeeecccccCCCCCCCCCCCCcccc
Q 006645 172 QWIAPPISGQRPKARYEHGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSW--AWSKIQAKAVAESTESPSPALLTPCAGH 249 (637)
Q Consensus 172 ~W~~~~~~g~~p~~R~~~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~~~~~~~~~~~p~~r~~h 249 (637)
.|+.... .. .....+-++.++.||+... .+.++.+|..|+ .|+.-....... .+.........
T Consensus 58 ~W~~~~~--~~--~g~~~~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~-----~~~~~~~~~~~ 122 (677)
T 1kb0_A 58 AWSYNLE--ST--RGVEATPVVVDGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRST-----GFKGCCDVVNR 122 (677)
T ss_dssp EEEEECC--CC--SCCCCCCEEETTEEEEECG------GGCEEEEETTTTEEEEEECCCCCGGG-----GGGSSSCSCCC
T ss_pred EEEEECC--CC--CCceeCCEEECCEEEEECC------CCeEEEEECCCCcEEEEEcCCCCccc-----cccccccCCCC
Confidence 7886432 11 1123445678999999875 357999999986 487643211000 00000001122
Q ss_pred eEEEeCCEEEEEEccCCCCCcceeEEEEECCCCc--eEeeccCCCCCC-CCCceEEEEECCEEEEEeCCCCCCCCCCceE
Q 006645 250 SLIPWENKLLSIAGHTKDPSEIIQVKVFDLQTCS--WSTLKTYGKPPV-SRGGQSVTLVGTSLVIFGGEDAKRSLLNDLH 326 (637)
Q Consensus 250 s~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~g~~p~-~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~ 326 (637)
+.+..+++||+... ...++++|..|++ |+..... ..+. .....+.++.++.+|+..+... ......|+
T Consensus 123 ~~a~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~-~~~~~~~~~~~p~v~~~~v~v~~~~~~-~~~~g~v~ 193 (677)
T 1kb0_A 123 GVALWKGKVYVGAW-------DGRLIALDAATGKEVWHQNTFE-GQKGSLTITGAPRVFKGKVIIGNGGAE-YGVRGYIT 193 (677)
T ss_dssp CCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEETTT-TCCSSCBCCSCCEEETTEEEECCBCTT-TCCBCEEE
T ss_pred CceEECCEEEEEcC-------CCEEEEEECCCCCEEeeecCCc-CcCcCcccccCcEEECCEEEEEecccc-cCCCCEEE
Confidence 34556888887632 2369999998765 8765320 1111 1112233455777776543221 11246799
Q ss_pred EEECCCCc--eEEec
Q 006645 327 ILDLETMT--WDEID 339 (637)
Q Consensus 327 ~yd~~t~~--W~~~~ 339 (637)
.||..|.+ |+.-.
T Consensus 194 a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 194 AYDAETGERKWRWFS 208 (677)
T ss_dssp EEETTTCCEEEEEES
T ss_pred EEECCCCcEEEEecc
Confidence 99998764 87654
No 77
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.28 E-value=1.4 Score=45.95 Aligned_cols=159 Identities=8% Similarity=0.110 Sum_probs=85.3
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~ 272 (637)
+++|.+.+...++.....++++|+.+..-..+... ... ...+.+ +++.+++++... ...
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~--------------~~~--v~~~~~Spdg~~la~~s~~~---~~~ 203 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRS--------------PQP--LMSPAWSPDGSKLAYVTFES---GRS 203 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEE--------------SSC--EEEEEECTTSSEEEEEECTT---SSC
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCC--------------CCc--ceeeEEcCCCCEEEEEEecC---CCc
Confidence 44554444322233335789999887655444321 111 122222 555566665532 135
Q ss_pred eEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CC-EEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCccc
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GT-SLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRS 349 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~ 349 (637)
.++++|+.+++...+... + ....+..+ ++ .|++.+..++ ...|+++|+.+.....+... ...
T Consensus 204 ~i~~~d~~tg~~~~l~~~---~---~~~~~~~~spdg~~la~~~~~~g----~~~i~~~d~~~~~~~~l~~~-----~~~ 268 (415)
T 2hqs_A 204 ALVIQTLANGAVRQVASF---P---RHNGAPAFSPDGSKLAFALSKTG----SLNLYVMDLASGQIRQVTDG-----RSN 268 (415)
T ss_dssp EEEEEETTTCCEEEEECC---S---SCEEEEEECTTSSEEEEEECTTS----SCEEEEEETTTCCEEECCCC-----SSC
T ss_pred EEEEEECCCCcEEEeecC---C---CcccCEEEcCCCCEEEEEEecCC----CceEEEEECCCCCEEeCcCC-----CCc
Confidence 799999999887766431 1 12223333 34 4555554332 34699999999887666422 112
Q ss_pred ccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEec
Q 006645 350 DHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 350 ~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l 389 (637)
..+.+...++..+++++.... ...+|++|+.+..-..+
T Consensus 269 ~~~~~~spdg~~l~~~s~~~g--~~~i~~~d~~~~~~~~l 306 (415)
T 2hqs_A 269 NTEPTWFPDSQNLAFTSDQAG--RPQVYKVNINGGAPQRI 306 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTS--SCEEEEEETTSSCCEEC
T ss_pred ccceEECCCCCEEEEEECCCC--CcEEEEEECCCCCEEEE
Confidence 223334445545555443221 24699999988765544
No 78
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.22 E-value=0.72 Score=45.09 Aligned_cols=112 Identities=10% Similarity=0.036 Sum_probs=76.0
Q ss_pred cceEEEeCCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEE
Q 006645 248 GHSLIPWENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHI 327 (637)
Q Consensus 248 ~hs~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~ 327 (637)
..+....++.||+..|..+. +..+|+.|++=..-- ++...++.+++..+++||+.... .+.+++
T Consensus 57 tqGL~~~~~~Ly~stG~~g~------v~~iD~~Tgkv~~~~----l~~~~FgeGit~~g~~Ly~ltw~------~~~v~V 120 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQGT------LRQLSLESAQPVWME----RLGNIFAEGLASDGERLYQLTWT------EGLLFT 120 (268)
T ss_dssp EEEEEEETTEEEEEETTTTE------EEECCSSCSSCSEEE----ECTTCCEEEEEECSSCEEEEESS------SCEEEE
T ss_pred cceEEEECCEEEEEcCCCCE------EEEEECCCCcEEeEE----CCCCcceeEEEEeCCEEEEEEcc------CCEEEE
Confidence 35566668999999997542 889999998754432 23334556677789999998653 467999
Q ss_pred EECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 328 LDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 328 yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
||+.+.+-..--+. +-.+.+++. .++.||+.-|. +.++.+|+.+..-.
T Consensus 121 ~D~~Tl~~~~ti~~-----~~eGwGLt~-Dg~~L~vSdGs------~~l~~iDp~T~~v~ 168 (268)
T 3nok_A 121 WSGMPPQRERTTRY-----SGEGWGLCY-WNGKLVRSDGG------TMLTFHEPDGFALV 168 (268)
T ss_dssp EETTTTEEEEEEEC-----SSCCCCEEE-ETTEEEEECSS------SEEEEECTTTCCEE
T ss_pred EECCcCcEEEEEeC-----CCceeEEec-CCCEEEEECCC------CEEEEEcCCCCeEE
Confidence 99998765432211 122345554 46788988652 57999999987644
No 79
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=95.21 E-value=0.67 Score=47.88 Aligned_cols=111 Identities=13% Similarity=0.133 Sum_probs=59.7
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE---CCEEEEEeCCCCCCCCCCceEEEECC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV---GTSLVIFGGEDAKRSLLNDLHILDLE 331 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~n~i~~yd~~ 331 (637)
++.+++.|+.++ .+.+||+.+..-...-. .......+..+ +..+++.||-.. -..+.+||+.
T Consensus 228 ~~~~l~s~~~d~------~v~iwd~~~~~~~~~~~-----~~~~~v~~~~~~p~~~~ll~~~~gs~----d~~i~i~d~~ 292 (401)
T 4aez_A 228 DGLQLASGGNDN------VVQIWDARSSIPKFTKT-----NHNAAVKAVAWCPWQSNLLATGGGTM----DKQIHFWNAA 292 (401)
T ss_dssp TSSEEEEEETTS------CEEEEETTCSSEEEEEC-----CCSSCCCEEEECTTSTTEEEEECCTT----TCEEEEEETT
T ss_pred CCCEEEEEeCCC------eEEEccCCCCCccEEec-----CCcceEEEEEECCCCCCEEEEecCCC----CCEEEEEECC
Confidence 567777787654 48899998755333211 11111222233 346777775211 3469999998
Q ss_pred CCceEEecCCCCCCCcccccEEEEEc-CCEEEEEeCCCCCCCcCcEEEEECCCCeeEec
Q 006645 332 TMTWDEIDAVGVPPSPRSDHAAAVHA-ERYLLIFGGGSHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 332 t~~W~~~~~~~~~p~~r~~h~~~~~~-~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l 389 (637)
+..-...-.. ...-.+++... +..|++.+|... +.+.+||+.+.....+
T Consensus 293 ~~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~g~~d----g~i~v~~~~~~~~~~~ 342 (401)
T 4aez_A 293 TGARVNTVDA-----GSQVTSLIWSPHSKEIMSTHGFPD----NNLSIWSYSSSGLTKQ 342 (401)
T ss_dssp TCCEEEEEEC-----SSCEEEEEECSSSSEEEEEECTTT----CEEEEEEEETTEEEEE
T ss_pred CCCEEEEEeC-----CCcEEEEEECCCCCeEEEEeecCC----CcEEEEecCCccceeE
Confidence 7765433211 11122333333 445555545432 3588999888766554
No 80
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=95.17 E-value=0.17 Score=44.15 Aligned_cols=56 Identities=14% Similarity=0.161 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhHH
Q 006645 535 LQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQTME 590 (637)
Q Consensus 535 ~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~~q 590 (637)
.+.-+++++.++++++++++.+++..+.++|...+.+...+++++.+|++++..++
T Consensus 68 dEl~k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~ 123 (138)
T 3hnw_A 68 DDYFKAKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQ 123 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456777777777788888888888888887777777666666666665555433
No 81
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=95.17 E-value=0.37 Score=38.79 Aligned_cols=29 Identities=24% Similarity=0.406 Sum_probs=12.7
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Q 006645 519 LKAEKEELESSLSKEKLQSIQLKQDLTEA 547 (637)
Q Consensus 519 l~~~~~~le~~~~e~~~~~~~l~~~l~e~ 547 (637)
++++..+++.++.....+..+|+.+|.+.
T Consensus 10 lre~l~~le~~~~~~~~e~~~L~~~l~eE 38 (97)
T 2eqb_B 10 LKEDYNTLKRELSDRDDEVKRLREDIAKE 38 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 33444444444444444444444444433
No 82
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=94.98 E-value=0.27 Score=38.19 Aligned_cols=64 Identities=19% Similarity=0.224 Sum_probs=41.9
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q 006645 523 KEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKL 586 (637)
Q Consensus 523 ~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~l 586 (637)
...|+..++..-..+..|+.++++.++++..+.++.++.+...........+|+++...-+.+|
T Consensus 8 leqLE~KIq~avdtI~lLqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl 71 (81)
T 2jee_A 8 FEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERL 71 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3466777777778888888888888888888888777766654433444444444444444443
No 83
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=94.93 E-value=0.66 Score=38.17 Aligned_cols=49 Identities=18% Similarity=0.256 Sum_probs=17.9
Q ss_pred HHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 006645 516 IATLKAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQ 564 (637)
Q Consensus 516 ~~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~q 564 (637)
++.|+.+.....+.....+.+...+.+....++..+..+++.++.++.+
T Consensus 11 m~~lk~e~e~a~d~ae~~e~~~k~~e~~~~~~E~ei~sL~kKiq~lE~e 59 (101)
T 3u59_A 11 MQMLKLDKENAIDRAEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEDE 59 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 3444444433333333333333333333333333333333333333333
No 84
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=94.93 E-value=1.1 Score=45.32 Aligned_cols=156 Identities=8% Similarity=0.130 Sum_probs=83.8
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~ 272 (637)
++.+++.||.+ ..+.++|+.+..|....... ........++.+ ++.+++.|+.+.
T Consensus 27 ~g~~las~~~D-----~~i~iw~~~~~~~~~~~~~~------------~~h~~~v~~~~~sp~g~~l~s~s~D~------ 83 (345)
T 3fm0_A 27 AGTLLASCGGD-----RRIRIWGTEGDSWICKSVLS------------EGHQRTVRKVAWSPCGNYLASASFDA------ 83 (345)
T ss_dssp TSSCEEEEETT-----SCEEEEEEETTEEEEEEEEC------------SSCSSCEEEEEECTTSSEEEEEETTS------
T ss_pred CCCEEEEEcCC-----CeEEEEEcCCCcceeeeeec------------cccCCcEEEEEECCCCCEEEEEECCC------
Confidence 56677777743 35788898888876443221 001111223333 567777787654
Q ss_pred eEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCc-eEEecCCCCCCCccc
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMT-WDEIDAVGVPPSPRS 349 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~-W~~~~~~~~~p~~r~ 349 (637)
.+.++|..+..+..+.. +........++.+ ++.+++.|+.+ ..+.+||+.+.. +..+.... .....
T Consensus 84 ~v~iw~~~~~~~~~~~~---~~~h~~~v~~v~~sp~~~~l~s~s~D------~~v~iwd~~~~~~~~~~~~~~--~h~~~ 152 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTT---LEGHENEVKSVAWAPSGNLLATCSRD------KSVWVWEVDEEDEYECVSVLN--SHTQD 152 (345)
T ss_dssp CEEEEEECCC-EEEEEE---ECCCSSCEEEEEECTTSSEEEEEETT------SCEEEEEECTTSCEEEEEEEC--CCCSC
T ss_pred cEEEEEccCCCeEEEEE---ccCCCCCceEEEEeCCCCEEEEEECC------CeEEEEECCCCCCeEEEEEec--CcCCC
Confidence 36777877776654433 1111122233333 46677777754 358888887643 33332111 01111
Q ss_pred ccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEec
Q 006645 350 DHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 350 ~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l 389 (637)
-.+++...++.+++.|+.+ ..+.+||..+..|..+
T Consensus 153 v~~~~~~p~~~~l~s~s~d-----~~i~~w~~~~~~~~~~ 187 (345)
T 3fm0_A 153 VKHVVWHPSQELLASASYD-----DTVKLYREEEDDWVCC 187 (345)
T ss_dssp EEEEEECSSSSCEEEEETT-----SCEEEEEEETTEEEEE
T ss_pred eEEEEECCCCCEEEEEeCC-----CcEEEEEecCCCEEEE
Confidence 1233344455677777754 3478888888877643
No 85
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=94.88 E-value=0.34 Score=36.80 Aligned_cols=64 Identities=25% Similarity=0.265 Sum_probs=39.4
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 006645 539 QLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQTMETLQKELELLQRQKAA 605 (637)
Q Consensus 539 ~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~~q~~~~e~~~~~~~~~~ 605 (637)
.+.++|++.+.++++++.+++..+.+|+..+.+-..++.++..+ ++.+.-+.-++.++++.++.
T Consensus 4 ~~~~kLq~~E~~N~~Le~~v~~le~~Le~s~~~q~~~~~Elk~~---~e~Ld~KI~eL~elrq~Lak 67 (72)
T 3cve_A 4 NSHMKLQEVEIRNKDLEGQLSEMEQRLEKSQSEQDAFRSNLKTL---LEILDGKIFELTELRDNLAK 67 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhhHHHHHHHHHHHHHH
Confidence 35567778888888888888888888876665444444444333 33344444555555555544
No 86
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=94.80 E-value=0.17 Score=39.20 Aligned_cols=66 Identities=18% Similarity=0.242 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 006645 537 SIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQTMETLQKELELLQRQKAA 605 (637)
Q Consensus 537 ~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~~q~~~~e~~~~~~~~~~ 605 (637)
...+.++|++.+.++++++.+++..+.+|+..+.+-..++.++..+ ++.+.-+.-++.++++.++.
T Consensus 8 ~e~~~~klq~~E~rN~~Le~~v~~le~~Le~s~~~q~~~~~Elk~l---~e~Ld~KI~eL~elRqgLak 73 (79)
T 3cvf_A 8 REETQQKVQDLETRNAELEHQLRAMERSLEEARAERERARAEVGRA---AQLLDVSLFELSELREGLAR 73 (79)
T ss_dssp --CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhhHHHHHHHHHHHHHH
Confidence 3445667777777788888888888887766655444444444333 33344444555556555544
No 87
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=94.75 E-value=2.7 Score=41.26 Aligned_cols=147 Identities=14% Similarity=0.120 Sum_probs=78.7
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~ 272 (637)
++.+++.|+.++ .+.++|..+......-.. .......+.+ ++.+++.|+.+.
T Consensus 34 ~~~~l~s~~~dg-----~i~iw~~~~~~~~~~~~~---------------h~~~v~~~~~~~~~~~l~s~~~d~------ 87 (312)
T 4ery_A 34 NGEWLASSSADK-----LIKIWGAYDGKFEKTISG---------------HKLGISDVAWSSDSNLLVSASDDK------ 87 (312)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTCCEEEEECC---------------CSSCEEEEEECTTSSEEEEEETTS------
T ss_pred CCCEEEEeeCCC-----eEEEEeCCCcccchhhcc---------------CCCceEEEEEcCCCCEEEEECCCC------
Confidence 345666666332 477888887766543211 1111222333 566777777643
Q ss_pred eEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccc
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSD 350 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~ 350 (637)
.+.+||+.+..-...-. .......++.+ ++.+++.|+.+ ..+.+||+.+.+-...-.. ....-
T Consensus 88 ~i~vwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~----~~~~v 152 (312)
T 4ery_A 88 TLKIWDVSSGKCLKTLK-----GHSNYVFCCNFNPQSNLIVSGSFD------ESVRIWDVKTGKCLKTLPA----HSDPV 152 (312)
T ss_dssp EEEEEETTTCCEEEEEE-----CCSSCEEEEEECSSSSEEEEEETT------SCEEEEETTTCCEEEEECC----CSSCE
T ss_pred EEEEEECCCCcEEEEEc-----CCCCCEEEEEEcCCCCEEEEEeCC------CcEEEEECCCCEEEEEecC----CCCcE
Confidence 58889988775433211 11111222333 45677777754 3588999987654332111 11111
Q ss_pred cEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 351 HAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 351 h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
.+++...++.+++.|+.+ ..+.+||+.+....
T Consensus 153 ~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~ 184 (312)
T 4ery_A 153 SAVHFNRDGSLIVSSSYD-----GLCRIWDTASGQCL 184 (312)
T ss_dssp EEEEECTTSSEEEEEETT-----SCEEEEETTTCCEE
T ss_pred EEEEEcCCCCEEEEEeCC-----CcEEEEECCCCcee
Confidence 233333455577777754 35889999876543
No 88
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=94.74 E-value=2.4 Score=44.32 Aligned_cols=148 Identities=10% Similarity=0.108 Sum_probs=80.6
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcceeE
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQV 274 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v 274 (637)
++.+++.|+.+ ..+.+||+.+.+-...-.. ........+..-++..++.|+.++ .+
T Consensus 279 ~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~sg~~dg------~i 334 (464)
T 3v7d_B 279 HGNIVVSGSYD-----NTLIVWDVAQMKCLYILSG-------------HTDRIYSTIYDHERKRCISASMDT------TI 334 (464)
T ss_dssp ETTEEEEEETT-----SCEEEEETTTTEEEEEECC-------------CSSCEEEEEEETTTTEEEEEETTS------CE
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEecC-------------CCCCEEEEEEcCCCCEEEEEeCCC------cE
Confidence 34556666533 3588999988664332110 111111112222556677777644 48
Q ss_pred EEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEE
Q 006645 275 KVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAA 354 (637)
Q Consensus 275 ~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~ 354 (637)
.+||+.+++-...-. .......+....+..++.|+.+ +.+.+||+.+..-...... ......++
T Consensus 335 ~vwd~~~~~~~~~~~-----~h~~~v~~~~~~~~~l~s~s~d------g~v~vwd~~~~~~~~~~~~-----~~~~~~~~ 398 (464)
T 3v7d_B 335 RIWDLENGELMYTLQ-----GHTALVGLLRLSDKFLVSAAAD------GSIRGWDANDYSRKFSYHH-----TNLSAITT 398 (464)
T ss_dssp EEEETTTTEEEEEEC-----CCSSCEEEEEECSSEEEEEETT------SEEEEEETTTCCEEEEEEC-----TTCCCEEE
T ss_pred EEEECCCCcEEEEEe-----CCCCcEEEEEEcCCEEEEEeCC------CcEEEEECCCCceeeeecC-----CCCccEEE
Confidence 899998876433311 1222334455567777777753 4588999987653322211 11122333
Q ss_pred EEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEe
Q 006645 355 VHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSR 388 (637)
Q Consensus 355 ~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~ 388 (637)
...++.+++.|+ + +.+.+||+.++.-..
T Consensus 399 ~~~~~~~l~~~~-d-----g~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 399 FYVSDNILVSGS-E-----NQFNIYNLRSGKLVH 426 (464)
T ss_dssp EEECSSEEEEEE-T-----TEEEEEETTTCCEEE
T ss_pred EEeCCCEEEEec-C-----CeEEEEECCCCcEEe
Confidence 334555777766 2 358999998876544
No 89
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=94.71 E-value=1.4 Score=42.18 Aligned_cols=157 Identities=10% Similarity=0.040 Sum_probs=81.1
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccC-CeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCccee
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRS-WAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQ 273 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t-~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~ 273 (637)
+++.+++++ ...++++|+.+ .....+.... ...........-+++.+++++.... ....
T Consensus 52 dg~~l~~~~------~~~i~~~d~~~~~~~~~~~~~~------------~~~~~~~~~~spdg~~l~~~~~~~~--~~~~ 111 (297)
T 2ojh_A 52 DGKYLLLNS------EGLLYRLSLAGDPSPEKVDTGF------------ATICNNDHGISPDGALYAISDKVEF--GKSA 111 (297)
T ss_dssp TSSEEEEEE------TTEEEEEESSSCCSCEECCCTT------------CCCBCSCCEECTTSSEEEEEECTTT--SSCE
T ss_pred CCCEEEEEc------CCeEEEEeCCCCCCceEecccc------------ccccccceEECCCCCEEEEEEeCCC--Ccce
Confidence 455555554 24799999998 7766553210 1112222222235666666653322 3467
Q ss_pred EEEEECCCCceEeeccCCCCCCCCCceEEEEE-CC-EEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCccccc
Q 006645 274 VKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GT-SLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDH 351 (637)
Q Consensus 274 v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h 351 (637)
++.+++.+.....+... .. ...+... ++ .|++.++.++ ...+|.+++.+.....+... +....
T Consensus 112 l~~~~~~~~~~~~~~~~----~~--~~~~~~spdg~~l~~~~~~~~----~~~l~~~~~~~~~~~~~~~~-----~~~~~ 176 (297)
T 2ojh_A 112 IYLLPSTGGTPRLMTKN----LP--SYWHGWSPDGKSFTYCGIRDQ----VFDIYSMDIDSGVETRLTHG-----EGRND 176 (297)
T ss_dssp EEEEETTCCCCEECCSS----SS--EEEEEECTTSSEEEEEEEETT----EEEEEEEETTTCCEEECCCS-----SSCEE
T ss_pred EEEEECCCCceEEeecC----CC--ccceEECCCCCEEEEEECCCC----ceEEEEEECCCCcceEcccC-----CCccc
Confidence 89999888775555331 11 1222222 33 4555554432 23578888887777665422 11122
Q ss_pred EEEEEcCCE-EEEEeCCCCCCCcCcEEEEECCCCeeEec
Q 006645 352 AAAVHAERY-LLIFGGGSHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 352 ~~~~~~~~~-l~v~GG~~~~~~~~dl~~~d~~t~~W~~l 389 (637)
+++...++. |++.+..++ ...+|.+++.+.....+
T Consensus 177 ~~~~s~dg~~l~~~~~~~~---~~~i~~~~~~~~~~~~~ 212 (297)
T 2ojh_A 177 GPDYSPDGRWIYFNSSRTG---QMQIWRVRVDGSSVERI 212 (297)
T ss_dssp EEEECTTSSEEEEEECTTS---SCEEEEEETTSSCEEEC
T ss_pred cceECCCCCEEEEEecCCC---CccEEEECCCCCCcEEE
Confidence 334434444 444443222 34688888777766655
No 90
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=94.70 E-value=0.22 Score=52.10 Aligned_cols=22 Identities=18% Similarity=0.107 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 006645 589 METLQKELELLQRQKAASEQAA 610 (637)
Q Consensus 589 ~q~~~~e~~~~~~~~~~~~~~~ 610 (637)
++.|+.-|++++.+++.||-.+
T Consensus 133 IrvLQsnLedq~~kIQRLEvDI 154 (562)
T 3ghg_A 133 IQLLQKNVRAQLVDMKRLEVDI 154 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444444
No 91
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=94.66 E-value=1.1 Score=39.93 Aligned_cols=70 Identities=17% Similarity=0.175 Sum_probs=29.2
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHh
Q 006645 519 LKAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQT 588 (637)
Q Consensus 519 l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~ 588 (637)
|+.+..++.+.++.......+++++..|....++.++..+.+.+..+...+.....||+++..||.+|.+
T Consensus 11 LekQL~E~n~kLk~EsE~~~rlkK~~tEl~k~~~~~E~~~rELq~~~~~L~~~k~~Leke~~~LQa~L~q 80 (168)
T 3o0z_A 11 LQKQLEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQLQAILEA 80 (168)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444444444444444444333333333332333333444444444444433
No 92
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.66 E-value=1.5 Score=43.13 Aligned_cols=109 Identities=14% Similarity=0.114 Sum_probs=60.0
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLET 332 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t 332 (637)
++.+++.|+.++ .+.+||+.+........ .........+..+ ++.+++.|+.+ ..+.+||+.+
T Consensus 108 ~~~~l~~~~~d~------~i~~~d~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~~~~~d------g~v~~~d~~~ 172 (337)
T 1gxr_A 108 DGCTLIVGGEAS------TLSIWDLAAPTPRIKAE---LTSSAPACYALAISPDSKVCFSCCSD------GNIAVWDLHN 172 (337)
T ss_dssp TSSEEEEEESSS------EEEEEECCCC--EEEEE---EECSSSCEEEEEECTTSSEEEEEETT------SCEEEEETTT
T ss_pred CCCEEEEEcCCC------cEEEEECCCCCcceeee---cccCCCceEEEEECCCCCEEEEEeCC------CcEEEEeCCC
Confidence 456667776543 68899998887544322 1111122223333 45667777653 4589999988
Q ss_pred CceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 333 MTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 333 ~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
.+....-.. ....-.+++...++..++.|+.+ ..+.+||+.+..-.
T Consensus 173 ~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~ 218 (337)
T 1gxr_A 173 QTLVRQFQG----HTDGASCIDISNDGTKLWTGGLD-----NTVRSWDLREGRQL 218 (337)
T ss_dssp TEEEEEECC----CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEE
T ss_pred Cceeeeeec----ccCceEEEEECCCCCEEEEEecC-----CcEEEEECCCCceE
Confidence 765433211 11122334444455567777643 45899999876543
No 93
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=94.61 E-value=2.2 Score=47.60 Aligned_cols=157 Identities=13% Similarity=0.065 Sum_probs=80.4
Q ss_pred cCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcceeEEEEECCCC-ceEe
Q 006645 210 LSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEIIQVKVFDLQTC-SWST 286 (637)
Q Consensus 210 ~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~-~W~~ 286 (637)
...++++|+.+.+-..+... .........+.+ +++.++++..+.. .....++.+|+.++ .+..
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~-------------~~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~~v~~~d~~~g~~~~~ 299 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTG-------------EPKEKFLTNLSWSPDENILYVAEVNRA-QNECKVNAYDAETGRFVRT 299 (706)
T ss_dssp EEEEEEEETTTTEEEECCCC-------------SCTTCEEEEEEECTTSSEEEEEEECTT-SCEEEEEEEETTTCCEEEE
T ss_pred eeEEEEEECCCCceEeeccC-------------CCCceeEeeEEEECCCCEEEEEEeCCC-CCeeEEEEEECCCCceeeE
Confidence 35689999998876554321 011112223333 5554444443322 34568999999998 6666
Q ss_pred eccCCCCC-CCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccE-EEEEcC-CEE
Q 006645 287 LKTYGKPP-VSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHA-AAVHAE-RYL 361 (637)
Q Consensus 287 ~~~~g~~p-~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~-~~~~~~-~~l 361 (637)
+....... .......+..- ++++++.+..++ ...+|.+|........+... ...... .+...+ +.|
T Consensus 300 ~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g----~~~l~~~~~~~~~~~~l~~~-----~~~v~~~~~~spdg~~l 370 (706)
T 2z3z_A 300 LFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG----WNHLYLYDTTGRLIRQVTKG-----EWEVTNFAGFDPKGTRL 370 (706)
T ss_dssp EEEEECSSCCCCCSCCEECTTCSSEEEEEECTTS----SCEEEEEETTSCEEEECCCS-----SSCEEEEEEECTTSSEE
T ss_pred EEEccCCCeECccCCceeecCCCCEEEEEEccCC----ccEEEEEECCCCEEEecCCC-----CeEEEeeeEEcCCCCEE
Confidence 54211000 00001112222 567666554432 35688888777767666321 111112 233334 455
Q ss_pred EEEeCCCCCCCcCcEEEEECCCCeeEecc
Q 006645 362 LIFGGGSHAACFNDLHVLDLQTMEWSRPT 390 (637)
Q Consensus 362 ~v~GG~~~~~~~~dl~~~d~~t~~W~~l~ 390 (637)
|+.+.. .......+|.+|+.+.....+.
T Consensus 371 ~~~~~~-~~~~~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 371 YFESTE-ASPLERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp EEEESS-SCTTCBEEEEEETTCCCCEESC
T ss_pred EEEecC-CCCceEEEEEEEcCCCCceecc
Confidence 555543 2222347899999887766553
No 94
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=94.51 E-value=0.14 Score=41.51 Aligned_cols=66 Identities=21% Similarity=0.236 Sum_probs=47.2
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhHH
Q 006645 525 ELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQTME 590 (637)
Q Consensus 525 ~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~~q 590 (637)
+|.-+.....=++..|+..|++.++.+.+++++++++.+++......+..|+.++..++.+|.+.+
T Consensus 20 QLDNEKsal~YqVdlLKD~LEe~eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~~~lk~~L~qRD 85 (103)
T 4h22_A 20 QLDNEKTNFMYQVDTLKDMLLELEEQLAESRRQYEEKNKEFEREKHAHSILQFQFAEVKEALKQRE 85 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333444455667889999999999999999998888876666666677777777776666533
No 95
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.42 E-value=2.9 Score=40.79 Aligned_cols=153 Identities=10% Similarity=-0.052 Sum_probs=79.8
Q ss_pred CEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEE-eCCEEEEEEccCCCCCcceeE
Q 006645 196 DKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIP-WENKLLSIAGHTKDPSEIIQV 274 (637)
Q Consensus 196 ~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~-~~~~lyv~GG~~~~~~~~~~v 274 (637)
+.||+.+.. .+.+++||+.+. ...+... ... -++++. -+++||+.... ...+
T Consensus 40 ~~l~~~~~~-----~~~i~~~~~~~~-~~~~~~~--------------~~~-~~~l~~~~dg~l~v~~~~------~~~i 92 (296)
T 3e5z_A 40 SAVIFSDVR-----QNRTWAWSDDGQ-LSPEMHP--------------SHH-QNGHCLNKQGHLIACSHG------LRRL 92 (296)
T ss_dssp TEEEEEEGG-----GTEEEEEETTSC-EEEEESS--------------CSS-EEEEEECTTCCEEEEETT------TTEE
T ss_pred CEEEEEeCC-----CCEEEEEECCCC-eEEEECC--------------CCC-cceeeECCCCcEEEEecC------CCeE
Confidence 458888753 246899999988 5554321 111 122332 25778776532 2368
Q ss_pred EEEECCCCceEeeccCC-CCCCCCCceEEEEECCEEEEE----eCCC------C-CCCCCCceEEEECCCCceEEecCCC
Q 006645 275 KVFDLQTCSWSTLKTYG-KPPVSRGGQSVTLVGTSLVIF----GGED------A-KRSLLNDLHILDLETMTWDEIDAVG 342 (637)
Q Consensus 275 ~~yd~~t~~W~~~~~~g-~~p~~r~~~~~~~~~~~lyv~----GG~~------~-~~~~~n~i~~yd~~t~~W~~~~~~~ 342 (637)
.+||+.+++...+.... ..+..+....++.-+++||+. |... . .....+.|++||+. .+...+...
T Consensus 93 ~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~- 170 (296)
T 3e5z_A 93 ERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRD- 170 (296)
T ss_dssp EEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECC-
T ss_pred EEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecC-
Confidence 99999888877663210 011111111222225688886 4311 0 01113579999987 555554321
Q ss_pred CCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECC-CCee
Q 006645 343 VPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQ-TMEW 386 (637)
Q Consensus 343 ~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~-t~~W 386 (637)
. ..-.++++..++.+++.+.. .+.+++||+. ++..
T Consensus 171 -~---~~~~gi~~s~dg~~lv~~~~-----~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 171 -R---VKPNGLAFLPSGNLLVSDTG-----DNATHRYCLNARGET 206 (296)
T ss_dssp -C---SSEEEEEECTTSCEEEEETT-----TTEEEEEEECSSSCE
T ss_pred -C---CCCccEEECCCCCEEEEeCC-----CCeEEEEEECCCCcC
Confidence 1 11234455445555554432 2468899886 4444
No 96
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.36 E-value=1 Score=51.15 Aligned_cols=106 Identities=10% Similarity=0.194 Sum_probs=63.8
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--C--CEEEEEEccCCCCCc
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--E--NKLLSIAGHTKDPSE 270 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~--~~lyv~GG~~~~~~~ 270 (637)
++.+++.||.+ ..+.+||+.+.++..+.... .....-.++.+ + +.+++.||.++
T Consensus 20 dg~~latg~~d-----g~I~vwd~~~~~~~~~~~l~-------------~h~~~V~~l~~s~~~~~~~l~s~s~Dg---- 77 (753)
T 3jro_A 20 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLT-------------GHEGPVWRVDWAHPKFGTILASCSYDG---- 77 (753)
T ss_dssp SSCCEEEEETT-----TEEEEEEEETTEEEEEEEEC-------------CCSSCEEEEEECCTTSCSEEEEEETTS----
T ss_pred CCCeEEEEECC-----CcEEEEecCCCCCccceecc-------------CCcCceEEEEecCCCCCCEEEEEeCCC----
Confidence 35566666643 35888898887777665542 11112223333 3 67777887754
Q ss_pred ceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--C--CEEEEEeCCCCCCCCCCceEEEECCCC
Q 006645 271 IIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--G--TSLVIFGGEDAKRSLLNDLHILDLETM 333 (637)
Q Consensus 271 ~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~n~i~~yd~~t~ 333 (637)
.|.+||+.++.|..+... ........++.+ + +.++++|+.+ ..+.+||+.+.
T Consensus 78 --~I~vwd~~~~~~~~~~~~---~~h~~~V~~v~~sp~~~~~~l~sgs~d------g~I~vwdl~~~ 133 (753)
T 3jro_A 78 --KVLIWKEENGRWSQIAVH---AVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKEN 133 (753)
T ss_dssp --CEEEEEEETTEEEEEEEE---CCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCSS
T ss_pred --eEEEEECCCCcccccccc---cCCCCCeEEEEECCCCCCCEEEEEeCC------CcEEEEEeecC
Confidence 488999999888776542 222223333333 2 6678888753 45888888765
No 97
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=94.34 E-value=0.86 Score=47.95 Aligned_cols=26 Identities=15% Similarity=0.162 Sum_probs=10.8
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHH
Q 006645 539 QLKQDLTEAESQNTDLYKELQSVRGQ 564 (637)
Q Consensus 539 ~l~~~l~e~e~~~~~~~~elq~~~~q 564 (637)
.++..+.+++.++.+.+..++++..+
T Consensus 125 ~Iq~slk~~Q~Qi~en~n~~~~~~~~ 150 (464)
T 1m1j_B 125 MIDNKLVKTQKQRKDNDIILSEYNTE 150 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcccccccchhhHHHHHHHH
Confidence 34444444444444444334433333
No 98
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=94.33 E-value=4.2 Score=40.45 Aligned_cols=107 Identities=12% Similarity=0.105 Sum_probs=60.6
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLET 332 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t 332 (637)
++++++.|+.++ .+.+||+.+++-...-. .......++.+ ++.+++.|+.+ ..|.+||+.+
T Consensus 175 dg~~lasg~~dg------~i~iwd~~~~~~~~~~~-----~h~~~v~~l~~spd~~~l~s~s~d------g~i~iwd~~~ 237 (321)
T 3ow8_A 175 DGKYLASGAIDG------IINIFDIATGKLLHTLE-----GHAMPIRSLTFSPDSQLLVTASDD------GYIKIYDVQH 237 (321)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEEEEC-----CCSSCCCEEEECTTSCEEEEECTT------SCEEEEETTT
T ss_pred CCCEEEEEcCCC------eEEEEECCCCcEEEEEc-----ccCCceeEEEEcCCCCEEEEEcCC------CeEEEEECCC
Confidence 567777777654 48899998876433211 11111122233 56777888754 3588999887
Q ss_pred CceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 333 MTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 333 ~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
......-.. ....-.+++...++..++.|+.+ ..+.+||+.+..-.
T Consensus 238 ~~~~~~~~~----h~~~v~~~~~sp~~~~l~s~s~D-----~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 238 ANLAGTLSG----HASWVLNVAFCPDDTHFVSSSSD-----KSVKVWDVGTRTCV 283 (321)
T ss_dssp CCEEEEECC----CSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEE
T ss_pred cceeEEEcC----CCCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCEEE
Confidence 665432111 11112233444455577777754 35888998876543
No 99
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=94.31 E-value=2.4 Score=41.91 Aligned_cols=145 Identities=6% Similarity=-0.027 Sum_probs=78.5
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEE-eCC-EEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIP-WEN-KLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~-~~~-~lyv~GG~~~~~~~~~ 272 (637)
++.+|+.++. .+.+.+||+.+++.......+ . ....++. -++ +||+.+... .
T Consensus 9 ~~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~-------------~--~~~~~~~s~dg~~l~~~~~~~------~ 62 (331)
T 3u4y_A 9 SNFGIVVEQH-----LRRISFFSTDTLEILNQITLG-------------Y--DFVDTAITSDCSNVVVTSDFC------Q 62 (331)
T ss_dssp CCEEEEEEGG-----GTEEEEEETTTCCEEEEEECC-------------C--CEEEEEECSSSCEEEEEESTT------C
T ss_pred CCEEEEEecC-----CCeEEEEeCcccceeeeEEcc-------------C--CcceEEEcCCCCEEEEEeCCC------C
Confidence 4678888763 247999999998876553321 1 1112222 244 577776532 3
Q ss_pred eEEEEECCCCce-EeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCccc
Q 006645 273 QVKVFDLQTCSW-STLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRS 349 (637)
Q Consensus 273 ~v~~yd~~t~~W-~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~ 349 (637)
.+++||+.++.. ......+.. ++ ++++.. +..|| .+...+. ...+++||+.+.+.......+ ..
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~--~~--~~~~~s~dg~~l~-~~~~~~~---~~~i~v~d~~~~~~~~~~~~~-----~~ 129 (331)
T 3u4y_A 63 TLVQIETQLEPPKVVAIQEGQS--SM--ADVDITPDDQFAV-TVTGLNH---PFNMQSYSFLKNKFISTIPIP-----YD 129 (331)
T ss_dssp EEEEEECSSSSCEEEEEEECSS--CC--CCEEECTTSSEEE-ECCCSSS---SCEEEEEETTTTEEEEEEECC-----TT
T ss_pred eEEEEECCCCceeEEecccCCC--Cc--cceEECCCCCEEE-EecCCCC---cccEEEEECCCCCeEEEEECC-----CC
Confidence 799999998875 332221211 11 212222 33566 3322111 137999999988765543222 12
Q ss_pred ccEEEEEcCC-EEEEEeCCCCCCCcCc-EEEEECCC
Q 006645 350 DHAAAVHAER-YLLIFGGGSHAACFND-LHVLDLQT 383 (637)
Q Consensus 350 ~h~~~~~~~~-~l~v~GG~~~~~~~~d-l~~~d~~t 383 (637)
.+.+++..++ +||+.+... +. +.+|++..
T Consensus 130 ~~~~~~spdg~~l~~~~~~~-----~~~i~~~~~~~ 160 (331)
T 3u4y_A 130 AVGIAISPNGNGLILIDRSS-----ANTVRRFKIDA 160 (331)
T ss_dssp EEEEEECTTSSCEEEEEETT-----TTEEEEEEECT
T ss_pred ccceEECCCCCEEEEEecCC-----CceEEEEEECC
Confidence 2455555554 577776532 34 67777653
No 100
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.26 E-value=3.2 Score=42.58 Aligned_cols=154 Identities=12% Similarity=0.098 Sum_probs=81.2
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEE-----EeeecccccCCCCCCCCCCCCcccceEEEe--CC-EEEEEEccCC
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWS-----KIQAKAVAESTESPSPALLTPCAGHSLIPW--EN-KLLSIAGHTK 266 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~-----~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~-~lyv~GG~~~ 266 (637)
++.+++.|+.+ ..+.+||+.++... .+.... .......++.+ ++ .+++.|+.+.
T Consensus 93 ~~~~l~s~s~d-----g~v~vw~~~~~~~~~~~~~~~~~~~-------------~h~~~v~~~~~~p~~~~~l~s~~~dg 154 (402)
T 2aq5_A 93 NDNVIASGSED-----CTVMVWEIPDGGLVLPLREPVITLE-------------GHTKRVGIVAWHPTAQNVLLSAGCDN 154 (402)
T ss_dssp CTTEEEEEETT-----SEEEEEECCTTCCSSCBCSCSEEEE-------------CCSSCEEEEEECSSBTTEEEEEETTS
T ss_pred CCCEEEEEeCC-----CeEEEEEccCCCCccccCCceEEec-------------CCCCeEEEEEECcCCCCEEEEEcCCC
Confidence 56677777743 35888998886442 111110 00111122233 33 5777777654
Q ss_pred CCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCC
Q 006645 267 DPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVP 344 (637)
Q Consensus 267 ~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~ 344 (637)
.+.+||+.++.....-.. ........++.+ ++.+++.|+.+ +.+.+||+.+..-...-..+
T Consensus 155 ------~i~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~-- 217 (402)
T 2aq5_A 155 ------VILVWDVGTGAAVLTLGP---DVHPDTIYSVDWSRDGALICTSCRD------KRVRVIEPRKGTVVAEKDRP-- 217 (402)
T ss_dssp ------CEEEEETTTTEEEEEECT---TTCCSCEEEEEECTTSSCEEEEETT------SEEEEEETTTTEEEEEEECS--
T ss_pred ------EEEEEECCCCCccEEEec---CCCCCceEEEEECCCCCEEEEEecC------CcEEEEeCCCCceeeeeccC--
Confidence 488999998875543210 111122233333 56677777653 46899999887643322011
Q ss_pred CCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 345 PSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 345 p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
........++...++.+++.|.... .-..+.+||+.+..
T Consensus 218 ~~~~~~~~~~~~~~~~~l~~g~~~~--~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 218 HEGTRPVHAVFVSEGKILTTGFSRM--SERQVALWDTKHLE 256 (402)
T ss_dssp SCSSSCCEEEECSTTEEEEEEECTT--CCEEEEEEETTBCS
T ss_pred CCCCcceEEEEcCCCcEEEEeccCC--CCceEEEEcCcccc
Confidence 1111123455556777777773111 12468899987643
No 101
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=94.25 E-value=1.2 Score=36.08 Aligned_cols=42 Identities=24% Similarity=0.375 Sum_probs=22.1
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 006645 524 EELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQL 565 (637)
Q Consensus 524 ~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql 565 (637)
+.++..++....+-..|.++|.+++.+...+..++...+.+.
T Consensus 7 ~~l~~eL~~l~~eE~~L~~eL~~lEke~~~l~~el~~le~E~ 48 (96)
T 3q8t_A 7 EQLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEA 48 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 344445555555555555555555555555555555554443
No 102
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=94.24 E-value=1.1 Score=39.79 Aligned_cols=43 Identities=19% Similarity=0.220 Sum_probs=27.6
Q ss_pred HhhhhhhHHHHHHHHHHHHhHH----HHHHHHHHHHHHHHHHHHHHH
Q 006645 569 QSRCFKLEVDVAELRQKLQTME----TLQKELELLQRQKAASEQAAL 611 (637)
Q Consensus 569 q~~~~~le~~~~el~~~lq~~q----~~~~e~~~~~~~~~~~~~~~~ 611 (637)
.+|....+.++..|..+|.+.+ ..+|.+..|+.....++..|.
T Consensus 69 sqrEd~yEeqIk~L~~kLKEAE~RAE~AERsv~kLEk~id~lEd~L~ 115 (155)
T 2efr_A 69 SQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELY 115 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455667777777777777633 455666666666666666663
No 103
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=94.24 E-value=0.39 Score=37.78 Aligned_cols=46 Identities=22% Similarity=0.220 Sum_probs=22.3
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 006645 520 KAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQL 565 (637)
Q Consensus 520 ~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql 565 (637)
+..+..++.+..........+..++.+.+....+++.++..+++.+
T Consensus 5 kkKm~~lk~e~d~a~~~~~~~e~~l~~~e~~~~~~E~ev~~L~kKi 50 (81)
T 1ic2_A 5 KKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKL 50 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3344444444444444455555555555555555555544443333
No 104
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=94.01 E-value=0.24 Score=50.48 Aligned_cols=152 Identities=10% Similarity=0.159 Sum_probs=75.1
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~ 272 (637)
++.+++.|+.+ ..+.+||+.+..|..+.... .......++.+ ++.+++.|+.+.
T Consensus 22 ~g~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~-------------~h~~~v~~~~~s~~~~~l~s~s~d~------ 77 (377)
T 3dwl_C 22 QRTEFVTTTAT-----NQVELYEQDGNGWKHARTFS-------------DHDKIVTCVDWAPKSNRIVTCSQDR------ 77 (377)
T ss_dssp SSSEEECCCSS-----SCBCEEEEETTEEEECCCBC-------------CCSSCEEEEEECTTTCCEEEEETTS------
T ss_pred CCCEEEEecCC-----CEEEEEEccCCceEEEEEEe-------------cCCceEEEEEEeCCCCEEEEEeCCC------
Confidence 45666777643 35778899898887765432 11111223333 567777777643
Q ss_pred eEEEEECCCCc-eEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCc-eEEecCCCCCCCcc
Q 006645 273 QVKVFDLQTCS-WSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMT-WDEIDAVGVPPSPR 348 (637)
Q Consensus 273 ~v~~yd~~t~~-W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~-W~~~~~~~~~p~~r 348 (637)
.+.+||+.+.. |...... ........++.+ ++.+++.|+.+ ..+.+||+.+.. |..+.... .+...
T Consensus 78 ~v~vwd~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~-~~h~~ 147 (377)
T 3dwl_C 78 NAYVYEKRPDGTWKQTLVL---LRLNRAATFVRWSPNEDKFAVGSGA------RVISVCYFEQENDWWVSKHLK-RPLRS 147 (377)
T ss_dssp SEEEC------CCCCEEEC---CCCSSCEEEEECCTTSSCCEEEESS------SCEEECCC-----CCCCEEEC-SSCCS
T ss_pred eEEEEEcCCCCceeeeeEe---cccCCceEEEEECCCCCEEEEEecC------CeEEEEEECCcccceeeeEee-cccCC
Confidence 48888888876 5444331 111222223333 45677777653 347788877654 32221110 11222
Q ss_pred cccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 349 SDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 349 ~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
.-.+++...++.+++.|+.+ ..+.+||+.+..
T Consensus 148 ~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~ 179 (377)
T 3dwl_C 148 TILSLDWHPNNVLLAAGCAD-----RKAYVLSAYVRD 179 (377)
T ss_dssp CEEEEEECTTSSEEEEEESS-----SCEEEEEECCSS
T ss_pred CeEEEEEcCCCCEEEEEeCC-----CEEEEEEEEecc
Confidence 22344444566677777754 347888876443
No 105
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=93.96 E-value=1.5 Score=43.50 Aligned_cols=160 Identities=14% Similarity=0.119 Sum_probs=80.1
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe-CC-EEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW-EN-KLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~-~~-~lyv~GG~~~~~~~~~ 272 (637)
++.+|+.++. .+.++++|+.+++....-..+ ....-+.++.. ++ .+|+.+.. ..
T Consensus 10 ~~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~-------------~~~~~~~~~~s~dg~~~~v~~~~------~~ 65 (349)
T 1jmx_B 10 GHEYMIVTNY-----PNNLHVVDVASDTVYKSCVMP-------------DKFGPGTAMMAPDNRTAYVLNNH------YG 65 (349)
T ss_dssp TCEEEEEEET-----TTEEEEEETTTTEEEEEEECS-------------SCCSSCEEEECTTSSEEEEEETT------TT
T ss_pred CCEEEEEeCC-----CCeEEEEECCCCcEEEEEecC-------------CCCCCceeEECCCCCEEEEEeCC------CC
Confidence 5778888763 257999999998765432221 10011222322 34 67777643 23
Q ss_pred eEEEEECCCCceEeeccCCCCCC--CCCceEEEEE-CC-EEEEEeCC--CCCCCC---CCceEEEECCCCceEEecCCCC
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPV--SRGGQSVTLV-GT-SLVIFGGE--DAKRSL---LNDLHILDLETMTWDEIDAVGV 343 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~--~r~~~~~~~~-~~-~lyv~GG~--~~~~~~---~n~i~~yd~~t~~W~~~~~~~~ 343 (637)
.+++||+.+++-...-..+..|. ...-+.++.. ++ .||+.+.. .....+ .+.+++||+.+..-......
T Consensus 66 ~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-- 143 (349)
T 1jmx_B 66 DIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRT-- 143 (349)
T ss_dssp EEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEE--
T ss_pred cEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeee--
Confidence 69999999887654322111110 1111222332 34 55554421 000001 25799999887432111000
Q ss_pred CCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEe
Q 006645 344 PPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSR 388 (637)
Q Consensus 344 ~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~ 388 (637)
.+.++.-+++++..++.+|+.++ +++++|+.+..-..
T Consensus 144 ~~~~~~~~~~~~s~dg~l~~~~~--------~i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 144 FPMPRQVYLMRAADDGSLYVAGP--------DIYKMDVKTGKYTV 180 (349)
T ss_dssp EECCSSCCCEEECTTSCEEEESS--------SEEEECTTTCCEEE
T ss_pred ccCCCcccceeECCCCcEEEccC--------cEEEEeCCCCceec
Confidence 01222334445555666766432 38999988776543
No 106
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=93.92 E-value=0.42 Score=41.74 Aligned_cols=12 Identities=17% Similarity=0.191 Sum_probs=4.4
Q ss_pred HHHHHHHHHHHH
Q 006645 595 ELELLQRQKAAS 606 (637)
Q Consensus 595 e~~~~~~~~~~~ 606 (637)
++..+++++..+
T Consensus 118 ~~~~l~~~~~~l 129 (138)
T 3hnw_A 118 EINKYQKNIVKL 129 (138)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 107
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=93.90 E-value=2.6 Score=42.66 Aligned_cols=106 Identities=14% Similarity=0.157 Sum_probs=56.9
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE---CCEEEEEeCCCCCCCCCCceEEEECC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV---GTSLVIFGGEDAKRSLLNDLHILDLE 331 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~n~i~~yd~~ 331 (637)
++.+++.|+.+. .|.++|+.+++-...-. .......++.+ +..+++.|+.+ +.|.+||+.
T Consensus 138 dg~~l~sgs~d~------~i~iwd~~~~~~~~~~~-----~h~~~V~~~~~~~~~~~~l~s~s~D------~~v~iwd~~ 200 (344)
T 4gqb_B 138 SGTQAVSGSKDI------CIKVWDLAQQVVLSSYR-----AHAAQVTCVAASPHKDSVFLSCSED------NRILLWDTR 200 (344)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEEEEC-----CCSSCEEEEEECSSCTTEEEEEETT------SCEEEEETT
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEEc-----CcCCceEEEEecCCCCCceeeeccc------ccccccccc
Confidence 567777787654 48899998876433311 11122223333 23577777754 358899998
Q ss_pred CCceEEecCCCCCCCccc-ccEEEEE-cCCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 332 TMTWDEIDAVGVPPSPRS-DHAAAVH-AERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 332 t~~W~~~~~~~~~p~~r~-~h~~~~~-~~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
+.+-...-.. ..... ..+++.. .++.+++.|+.+ ..|.+||+.+..
T Consensus 201 ~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~l~sg~~d-----g~v~~wd~~~~~ 248 (344)
T 4gqb_B 201 CPKPASQIGC---SAPGYLPTSLAWHPQQSEVFVFGDEN-----GTVSLVDTKSTS 248 (344)
T ss_dssp SSSCEEECC-------CCCEEEEEECSSCTTEEEEEETT-----SEEEEEESCC--
T ss_pred ccceeeeeec---ceeeccceeeeecCCCCcceEEeccC-----CcEEEEECCCCc
Confidence 7664332111 11111 1122332 245578888754 357889987653
No 108
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=93.90 E-value=0.55 Score=37.63 Aligned_cols=37 Identities=11% Similarity=0.184 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhH
Q 006645 553 DLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQTM 589 (637)
Q Consensus 553 ~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~~ 589 (637)
.+.++......|+++.++++..|.....+|..++.++
T Consensus 46 ~l~~ek~~L~~ql~eaEe~~~~L~~~K~eLE~~l~el 82 (89)
T 3bas_A 46 TLLEQKNDLFGSMKQLEDKVEELLSKNYHLENEVARL 82 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333335555556655555555554444443
No 109
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=93.84 E-value=4.9 Score=38.65 Aligned_cols=155 Identities=12% Similarity=-0.011 Sum_probs=83.3
Q ss_pred eeEEEE-CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe-CCEEEEEEccCC
Q 006645 189 HGAAVV-QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW-ENKLLSIAGHTK 266 (637)
Q Consensus 189 ~a~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~-~~~lyv~GG~~~ 266 (637)
++++.. ++.||+.... .+.+++||+ +++........ ....-++++.. +++||+....
T Consensus 102 ~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~~~-------------~~~~~~~i~~~~~g~l~v~~~~-- 160 (299)
T 2z2n_A 102 YGITEGPNGDIWFTEMN-----GNRIGRITD-DGKIREYELPN-------------KGSYPSFITLGSDNALWFTENQ-- 160 (299)
T ss_dssp EEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSS-------------TTCCEEEEEECTTSCEEEEETT--
T ss_pred eeeEECCCCCEEEEecC-----CceEEEECC-CCCEEEecCCC-------------CCCCCceEEEcCCCCEEEEeCC--
Confidence 444444 4778886532 246889998 66655442210 11112233333 5688886532
Q ss_pred CCCcceeEEEEECCCCceEeeccCCCCCCCCCce-EEEEE-CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCC
Q 006645 267 DPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQ-SVTLV-GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVP 344 (637)
Q Consensus 267 ~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~ 344 (637)
.+.+++||+ +++...... +...... .++.. ++.||+.... .+.+.+||+ +..+.......
T Consensus 161 ----~~~i~~~~~-~g~~~~~~~----~~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~-~g~~~~~~~~~-- 222 (299)
T 2z2n_A 161 ----NNAIGRITE-SGDITEFKI----PTPASGPVGITKGNDDALWFVEII------GNKIGRITT-SGEITEFKIPT-- 222 (299)
T ss_dssp ----TTEEEEECT-TCCEEEEEC----SSTTCCEEEEEECTTSSEEEEETT------TTEEEEECT-TCCEEEEECSS--
T ss_pred ----CCEEEEEcC-CCcEEEeeC----CCCCCcceeEEECCCCCEEEEccC------CceEEEECC-CCcEEEEECCC--
Confidence 246899999 777766532 1111112 22332 4578776532 356999999 77776653221
Q ss_pred CCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEec
Q 006645 345 PSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 345 p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l 389 (637)
....-+++++..++.|||.... .+.|.+||+ +.....+
T Consensus 223 -~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~ 260 (299)
T 2z2n_A 223 -PNARPHAITAGAGIDLWFTEWG-----ANKIGRLTS-NNIIEEY 260 (299)
T ss_dssp -TTCCEEEEEECSTTCEEEEETT-----TTEEEEEET-TTEEEEE
T ss_pred -CCCCceeEEECCCCCEEEeccC-----CceEEEECC-CCceEEE
Confidence 1112234445445668876522 245899998 4555544
No 110
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=93.81 E-value=0.29 Score=41.46 Aligned_cols=76 Identities=21% Similarity=0.304 Sum_probs=43.7
Q ss_pred CchhHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHh
Q 006645 510 ETTEHLIATLKAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQT 588 (637)
Q Consensus 510 ~~~e~~~~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~ 588 (637)
.+.+.+|..|+.+.+.+...+..+..+.++ -+.+++.++.+++.+|.+.+++.+.....+..|..+++.++.+.+.
T Consensus 11 d~rD~~Ie~Lkreie~lk~ele~l~~E~q~---~v~ql~~~i~~Le~eL~e~r~~~q~a~~e~e~Lr~e~~~l~~~~~~ 86 (120)
T 3i00_A 11 DEKDHLIERLYREISGLKAQLENMKTESQR---VVLQLKGHVSELEADLAEQQHLRQQAADDCEFLRAELDELRRQRED 86 (120)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 344566777777777777766665544433 3344445555666666666655555555555565666555444443
No 111
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=93.80 E-value=3.8 Score=40.30 Aligned_cols=162 Identities=8% Similarity=0.069 Sum_probs=78.0
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccC-CeEEEee--ecccccCCCCCCCCCCCCcccceEEEe-CC-EEEEEEccCCCCC
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRS-WAWSKIQ--AKAVAESTESPSPALLTPCAGHSLIPW-EN-KLLSIAGHTKDPS 269 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t-~~W~~~~--~~~~~~~~~~~~~~~p~~r~~hs~v~~-~~-~lyv~GG~~~~~~ 269 (637)
+..||+.+.. .+.+.+||+.+ .+...+. ... .+....-..++.. ++ +||+.+...
T Consensus 140 g~~l~~~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~pdg~~l~~~~~~~---- 199 (343)
T 1ri6_A 140 NRTLWVPALK-----QDRICLFTVSDDGHLVAQDPAEVT-----------TVEGAGPRHMVFHPNEQYAYCVNELN---- 199 (343)
T ss_dssp SSEEEEEEGG-----GTEEEEEEECTTSCEEEEEEEEEE-----------CSTTCCEEEEEECTTSSEEEEEETTT----
T ss_pred CCEEEEecCC-----CCEEEEEEecCCCceeeecccccc-----------cCCCCCcceEEECCCCCEEEEEeCCC----
Confidence 3467776521 24689999988 7665443 111 0111111112222 33 577766432
Q ss_pred cceeEEEEECC--CCceEeeccCCCCCCC---CCceEEEEE---CCEEEEEeCCCCCCCCCCceEEEECC--CCceEEec
Q 006645 270 EIIQVKVFDLQ--TCSWSTLKTYGKPPVS---RGGQSVTLV---GTSLVIFGGEDAKRSLLNDLHILDLE--TMTWDEID 339 (637)
Q Consensus 270 ~~~~v~~yd~~--t~~W~~~~~~g~~p~~---r~~~~~~~~---~~~lyv~GG~~~~~~~~n~i~~yd~~--t~~W~~~~ 339 (637)
+.+.+||+. ++.+.........|.. ......+.+ +..||+.+.. .+.+.+||+. +.++..+.
T Consensus 200 --~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~------~~~i~v~d~~~~~~~~~~~~ 271 (343)
T 1ri6_A 200 --SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT------ASLITVFSVSEDGSVLSKEG 271 (343)
T ss_dssp --TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT------TTEEEEEEECTTSCCEEEEE
T ss_pred --CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC------CCEEEEEEEcCCCCceEEee
Confidence 368888884 4555433221112221 112222333 3367765532 3568889887 55666553
Q ss_pred CCCCCCCcccccEEEEEcC-CEEEEEeCCCCCCCcCcEEEEECCCCeeEecc
Q 006645 340 AVGVPPSPRSDHAAAVHAE-RYLLIFGGGSHAACFNDLHVLDLQTMEWSRPT 390 (637)
Q Consensus 340 ~~~~~p~~r~~h~~~~~~~-~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~ 390 (637)
... ....-..+++..+ +.||+.++.++ . -.+|.+|+.++.++.+.
T Consensus 272 ~~~---~~~~~~~~~~s~dg~~l~~~~~~~~-~--v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 272 FQP---TETQPRGFNVDHSGKYLIAAGQKSH-H--ISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp EEE---CSSSCCCEEECTTSSEEEEECTTTC-E--EEEEEEETTTTEEEEEE
T ss_pred eec---CCCccceEEECCCCCEEEEecCCCC-e--EEEEEEcCCCceeeEcc
Confidence 221 1111223444444 44555543321 1 12455588888887764
No 112
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=93.79 E-value=3.6 Score=40.50 Aligned_cols=154 Identities=10% Similarity=0.055 Sum_probs=71.8
Q ss_pred CCEEEEEcccCCCcccCcEEEEEcc--CCeEEEeeecccccCCCCCCCCCCCCcccceEEE-eCC-EEEEEEccCCCCCc
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLR--SWAWSKIQAKAVAESTESPSPALLTPCAGHSLIP-WEN-KLLSIAGHTKDPSE 270 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~--t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~-~~~-~lyv~GG~~~~~~~ 270 (637)
+..||+.+. .+ ..+.+|++. ++++..+.... ..... ..++. -++ .||+.+..+
T Consensus 49 g~~l~~~~~-~~----~~v~~~~~~~~~~~~~~~~~~~------------~~~~~-~~~~~s~dg~~l~~~~~~~----- 105 (343)
T 1ri6_A 49 KRYLYVGVR-PE----FRVLAYRIAPDDGALTFAAESA------------LPGSL-THISTDHQGQFVFVGSYNA----- 105 (343)
T ss_dssp SSEEEEEET-TT----TEEEEEEECTTTCCEEEEEEEE------------CSSCC-SEEEECTTSSEEEEEETTT-----
T ss_pred CCEEEEeec-CC----CeEEEEEecCCCCceeeccccc------------cCCCC-cEEEEcCCCCEEEEEecCC-----
Confidence 345666544 21 467777776 77887665432 01111 12222 234 466654322
Q ss_pred ceeEEEEECCCCc-eEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCC-CceEEec--CCCCC
Q 006645 271 IIQVKVFDLQTCS-WSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLET-MTWDEID--AVGVP 344 (637)
Q Consensus 271 ~~~v~~yd~~t~~-W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t-~~W~~~~--~~~~~ 344 (637)
..+.+||+..+. ...+... +....-+.++.. +..||+.+.. .+.+.+||+.+ .+...+. ... .
T Consensus 106 -~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~s~dg~~l~~~~~~------~~~v~~~d~~~~~~~~~~~~~~~~-~ 174 (343)
T 1ri6_A 106 -GNVSVTRLEDGLPVGVVDVV---EGLDGCHSANISPDNRTLWVPALK------QDRICLFTVSDDGHLVAQDPAEVT-T 174 (343)
T ss_dssp -TEEEEEEEETTEEEEEEEEE---CCCTTBCCCEECTTSSEEEEEEGG------GTEEEEEEECTTSCEEEEEEEEEE-C
T ss_pred -CeEEEEECCCCccccccccc---cCCCCceEEEECCCCCEEEEecCC------CCEEEEEEecCCCceeeecccccc-c
Confidence 357788873222 2222211 111112222222 3367666532 24689999987 6665332 110 1
Q ss_pred CCcccccEEEEEcC-CEEEEEeCCCCCCCcCcEEEEECC--CCeeE
Q 006645 345 PSPRSDHAAAVHAE-RYLLIFGGGSHAACFNDLHVLDLQ--TMEWS 387 (637)
Q Consensus 345 p~~r~~h~~~~~~~-~~l~v~GG~~~~~~~~dl~~~d~~--t~~W~ 387 (637)
+....-..+++..+ ..||+.+..+ +.+.+||+. +..+.
T Consensus 175 ~~~~~~~~~~~~pdg~~l~~~~~~~-----~~i~~~~~~~~~g~~~ 215 (343)
T 1ri6_A 175 VEGAGPRHMVFHPNEQYAYCVNELN-----SSVDVWELKDPHGNIE 215 (343)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTT-----TEEEEEESSCTTSCCE
T ss_pred CCCCCcceEEECCCCCEEEEEeCCC-----CEEEEEEecCCCCcEE
Confidence 11111123444444 4577766432 458888884 44443
No 113
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=93.77 E-value=6.6 Score=40.89 Aligned_cols=155 Identities=13% Similarity=0.092 Sum_probs=76.6
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEE-eCCEEEEEEccCCCCCccee
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIP-WENKLLSIAGHTKDPSEIIQ 273 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~-~~~~lyv~GG~~~~~~~~~~ 273 (637)
.+.+++.|+.+ ..+.++|+.++.-...-.. ...+........ -++.+++.|+.++ .
T Consensus 172 ~~~~l~s~s~d-----g~i~vwd~~~~~~~~~~~~------------h~~~v~~l~~~~~~~~~~l~s~s~d~------~ 228 (464)
T 3v7d_B 172 HGGILVSGSTD-----RTVRVWDIKKGCCTHVFEG------------HNSTVRCLDIVEYKNIKYIVTGSRDN------T 228 (464)
T ss_dssp STTEEEEEETT-----SCEEEEETTTTEEEEEECC------------CSSCEEEEEEEESSSCEEEEEEETTS------C
T ss_pred CCCEEEEEeCC-----CCEEEEECCCCcEEEEECC------------CCCccEEEEEecCCCCCEEEEEcCCC------c
Confidence 34366666643 3588999988764332110 011111111111 1457777777654 4
Q ss_pred EEEEECCCCceEeeccCC------------------CCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCce
Q 006645 274 VKVFDLQTCSWSTLKTYG------------------KPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTW 335 (637)
Q Consensus 274 v~~yd~~t~~W~~~~~~g------------------~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W 335 (637)
+.+||+.+..-....... ..........+...++.+++.|+.+ +.+.+||+.+.+-
T Consensus 229 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d------~~i~vwd~~~~~~ 302 (464)
T 3v7d_B 229 LHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYD------NTLIVWDVAQMKC 302 (464)
T ss_dssp EEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETT------SCEEEEETTTTEE
T ss_pred EEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCC------CeEEEEECCCCcE
Confidence 778887765422110000 0000111112223345566667653 4589999987654
Q ss_pred EEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 336 DEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 336 ~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
...-. .....-.+++...++..++.|+.+ ..+.+||+.+..-.
T Consensus 303 ~~~~~----~~~~~v~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 303 LYILS----GHTDRIYSTIYDHERKRCISASMD-----TTIRIWDLENGELM 345 (464)
T ss_dssp EEEEC----CCSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTTEEE
T ss_pred EEEec----CCCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCcEE
Confidence 33221 111222344444455567777654 35899999876543
No 114
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=93.70 E-value=5.6 Score=40.20 Aligned_cols=144 Identities=10% Similarity=0.053 Sum_probs=79.1
Q ss_pred EEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe---CCEEEEEEccCCCCCccee
Q 006645 197 KMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW---ENKLLSIAGHTKDPSEIIQ 273 (637)
Q Consensus 197 ~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~---~~~lyv~GG~~~~~~~~~~ 273 (637)
.+++.|+.+ ..+.+||+.+.......... .......++.+ ++.+++.|+.+. .
T Consensus 87 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~-------------~h~~~v~~~~~~~~~~~~l~s~~~d~------~ 142 (383)
T 3ei3_B 87 TTVAVGSKG-----GDIILWDYDVQNKTSFIQGM-------------GPGDAITGMKFNQFNTNQLFVSSIRG------A 142 (383)
T ss_dssp TEEEEEEBT-----SCEEEEETTSTTCEEEECCC-------------STTCBEEEEEEETTEEEEEEEEETTT------E
T ss_pred CEEEEEcCC-----CeEEEEeCCCcccceeeecC-------------CcCCceeEEEeCCCCCCEEEEEeCCC------E
Confidence 577777643 35889999987766543210 01111222333 346777776643 5
Q ss_pred EEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCccccc
Q 006645 274 VKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDH 351 (637)
Q Consensus 274 v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h 351 (637)
+.++|+.+.....+... ........++.+ ++.+++.|+.+ ..+.+||+....-..+... ...-.
T Consensus 143 i~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~h-----~~~v~ 208 (383)
T 3ei3_B 143 TTLRDFSGSVIQVFAKT---DSWDYWYCCVDVSVSRQMLATGDST------GRLLLLGLDGHEIFKEKLH-----KAKVT 208 (383)
T ss_dssp EEEEETTSCEEEEEECC---CCSSCCEEEEEEETTTTEEEEEETT------SEEEEEETTSCEEEEEECS-----SSCEE
T ss_pred EEEEECCCCceEEEecc---CCCCCCeEEEEECCCCCEEEEECCC------CCEEEEECCCCEEEEeccC-----CCcEE
Confidence 88999987766665431 111111222222 45677777653 4689999865544444311 11222
Q ss_pred EEEEEcCCE-EEEEeCCCCCCCcCcEEEEECCC
Q 006645 352 AAAVHAERY-LLIFGGGSHAACFNDLHVLDLQT 383 (637)
Q Consensus 352 ~~~~~~~~~-l~v~GG~~~~~~~~dl~~~d~~t 383 (637)
+++...++. +++.|+.+ ..+.+||+.+
T Consensus 209 ~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~ 236 (383)
T 3ei3_B 209 HAEFNPRCDWLMATSSVD-----ATVKLWDLRN 236 (383)
T ss_dssp EEEECSSCTTEEEEEETT-----SEEEEEEGGG
T ss_pred EEEECCCCCCEEEEEeCC-----CEEEEEeCCC
Confidence 344444444 77777754 3588888876
No 115
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.69 E-value=0.43 Score=54.37 Aligned_cols=149 Identities=15% Similarity=0.138 Sum_probs=79.6
Q ss_pred CEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--C--CEEEEEEccCCCCCcc
Q 006645 196 DKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--E--NKLLSIAGHTKDPSEI 271 (637)
Q Consensus 196 ~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~--~~lyv~GG~~~~~~~~ 271 (637)
+.+++.||.+ ..+.++|+.++.|..+.... .......++.+ + +.+++.||.++
T Consensus 67 ~~~l~s~s~D-----g~I~vwd~~~~~~~~~~~~~-------------~h~~~V~~v~~sp~~~~~~l~sgs~dg----- 123 (753)
T 3jro_A 67 GTILASCSYD-----GKVLIWKEENGRWSQIAVHA-------------VHSASVNSVQWAPHEYGPLLLVASSDG----- 123 (753)
T ss_dssp CSEEEEEETT-----SCEEEEEEETTEEEEEEEEC-------------CCSSCEEEEEECCGGGCSEEEEEETTS-----
T ss_pred CCEEEEEeCC-----CeEEEEECCCCccccccccc-------------CCCCCeEEEEECCCCCCCEEEEEeCCC-----
Confidence 5677777743 35889999999887765542 11122233333 3 66778887644
Q ss_pred eeEEEEECCCCceEeeccCCCCCCCCCceEEEEE---------------CCEEEEEeCCCCCCCCCCceEEEECCCC--c
Q 006645 272 IQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV---------------GTSLVIFGGEDAKRSLLNDLHILDLETM--T 334 (637)
Q Consensus 272 ~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---------------~~~lyv~GG~~~~~~~~n~i~~yd~~t~--~ 334 (637)
.+.+||+.+..-...... ........++.+ ++.+++.|+.+ +.|.+||+.+. .
T Consensus 124 -~I~vwdl~~~~~~~~~~~---~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~d------g~I~iwd~~~~~~~ 193 (753)
T 3jro_A 124 -KVSVVEFKENGTTSPIII---DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD------NLVKIWKYNSDAQT 193 (753)
T ss_dssp -EEEEEECCSSSCCCCEEE---ECCSSCEEEEEECCCC---------CGGGCCEEEEETT------SCEEEEEEETTTTE
T ss_pred -cEEEEEeecCCCcceeEe---ecCCCceEEEEecCcccccccccccCCCCCEEEEEECC------CeEEEEeccCCccc
Confidence 588888877632111110 000111122222 25677777753 34788887654 3
Q ss_pred eEEecCCCCCCCcccccEEEEEcC---CEEEEEeCCCCCCCcCcEEEEECCCC
Q 006645 335 WDEIDAVGVPPSPRSDHAAAVHAE---RYLLIFGGGSHAACFNDLHVLDLQTM 384 (637)
Q Consensus 335 W~~~~~~~~~p~~r~~h~~~~~~~---~~l~v~GG~~~~~~~~dl~~~d~~t~ 384 (637)
+..+.... .....-.+++...+ +.+++.||.+ ..+.+||+.+.
T Consensus 194 ~~~~~~~~--~h~~~V~~l~~sp~~~~~~~l~s~s~D-----g~I~iwd~~~~ 239 (753)
T 3jro_A 194 YVLESTLE--GHSDWVRDVAWSPTVLLRSYLASVSQD-----RTCIIWTQDNE 239 (753)
T ss_dssp EEEEEEEC--CCSSCEEEEEECCCCSSSEEEEEEESS-----SCEEEEEESSS
T ss_pred ceeeeeec--CCCCcEEEEEeccCCCCCCEEEEEecC-----CEEEEecCCCC
Confidence 43332211 11122234444445 6788888864 34788887764
No 116
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=93.67 E-value=9.8 Score=41.53 Aligned_cols=128 Identities=15% Similarity=0.218 Sum_probs=71.9
Q ss_pred eeEEEECCEEEEEcccCCCcccCcEEEEEc-cCC--eEEEeeecccccCCCCCCCCCCCCc---ccceEEEeCCEEEEEE
Q 006645 189 HGAAVVQDKMYIYGGNHNGRYLSDMHILDL-RSW--AWSKIQAKAVAESTESPSPALLTPC---AGHSLIPWENKLLSIA 262 (637)
Q Consensus 189 ~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~-~t~--~W~~~~~~~~~~~~~~~~~~~p~~r---~~hs~v~~~~~lyv~G 262 (637)
.+-++.++.||+.... .+.++.||. .|+ .|+.-..... ...+..+ ...+.+..+++||+..
T Consensus 56 ~~P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~v~v~~ 122 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAF-----PNNTYALNLNDPGKIVWQHKPKQDA--------STKAVMCCDVVDRGLAYGAGQIVKKQ 122 (571)
T ss_dssp SCCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCG--------GGGGGCTTCSCCCCCEEETTEEEEEC
T ss_pred cccEEECCEEEEEeCC-----CCEEEEEeCCCCccEEEEEcCCCCc--------cccccccccccccccEEECCEEEEEe
Confidence 4556789999998652 246999999 775 5876422110 0000011 1123455688888864
Q ss_pred ccCCCCCcceeEEEEECCCCc--eEeeccCCCCCCC-CCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCC--ceEE
Q 006645 263 GHTKDPSEIIQVKVFDLQTCS--WSTLKTYGKPPVS-RGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETM--TWDE 337 (637)
Q Consensus 263 G~~~~~~~~~~v~~yd~~t~~--W~~~~~~g~~p~~-r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~--~W~~ 337 (637)
. ...++++|..+++ |+..... .+.. ....+-++.++.+|+-.+.... .....++.||+.|. .|+.
T Consensus 123 ~-------dg~l~alD~~tG~~~W~~~~~~--~~~~~~~~~~P~v~~g~v~vg~~~~~~-~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 123 A-------NGHLLALDAKTGKINWEVEVCD--PKVGSTLTQAPFVAKDTVLMGCSGAEL-GVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp T-------TSEEEEEETTTCCEEEEEECCC--GGGTCBCCSCCEEETTEEEEECBCGGG-TCCCEEEEEETTTCCEEEEE
T ss_pred C-------CCEEEEEECCCCCEEEEecCCC--CCccceeccCCEEECCEEEEEecCCcc-CCCCEEEEEECCCCcEEEEE
Confidence 3 2369999998874 8765221 1111 1112234468887765432111 12357999999876 4876
Q ss_pred ec
Q 006645 338 ID 339 (637)
Q Consensus 338 ~~ 339 (637)
-.
T Consensus 193 ~~ 194 (571)
T 2ad6_A 193 FA 194 (571)
T ss_dssp ES
T ss_pred cc
Confidence 53
No 117
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=93.65 E-value=6.2 Score=39.17 Aligned_cols=108 Identities=12% Similarity=0.135 Sum_probs=60.2
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE-CCEEEEEeCCCCCCCCCCceEEEECCCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GTSLVIFGGEDAKRSLLNDLHILDLETM 333 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~n~i~~yd~~t~ 333 (637)
++.+++.|+.+. .+.++|+.+++-...-..+ +.. ..+++.. ++..++.|+.+ ..+.+||+.+.
T Consensus 91 ~~~~l~s~s~D~------~i~lWd~~~~~~~~~~~~~--~~~--~~~~~~spdg~~l~~g~~d------g~v~i~~~~~~ 154 (321)
T 3ow8_A 91 TLPIAASSSLDA------HIRLWDLENGKQIKSIDAG--PVD--AWTLAFSPDSQYLATGTHV------GKVNIFGVESG 154 (321)
T ss_dssp SSSEEEEEETTS------EEEEEETTTTEEEEEEECC--TTC--CCCEEECTTSSEEEEECTT------SEEEEEETTTC
T ss_pred CCCEEEEEeCCC------cEEEEECCCCCEEEEEeCC--Ccc--EEEEEECCCCCEEEEEcCC------CcEEEEEcCCC
Confidence 445667776643 5888998887644332211 111 1122222 55677777653 45888998776
Q ss_pred ceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 334 TWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 334 ~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
.-...-. .....-.+++...++.+++.|+.+ ..+.+||+.+..-.
T Consensus 155 ~~~~~~~----~~~~~v~~~~~spdg~~lasg~~d-----g~i~iwd~~~~~~~ 199 (321)
T 3ow8_A 155 KKEYSLD----TRGKFILSIAYSPDGKYLASGAID-----GIINIFDIATGKLL 199 (321)
T ss_dssp SEEEEEE----CSSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEE
T ss_pred ceeEEec----CCCceEEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcEE
Confidence 5432211 111222344444566677777754 35889999877543
No 118
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=93.55 E-value=4.6 Score=41.96 Aligned_cols=117 Identities=15% Similarity=0.173 Sum_probs=63.5
Q ss_pred EEeCCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECC
Q 006645 252 IPWENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLE 331 (637)
Q Consensus 252 v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~ 331 (637)
...++.+++.|+.++ .+.+||+.++.-...-.. .........+...++.+++.|+.+ +.|.+||+.
T Consensus 325 ~~~~~~~l~~~~~dg------~i~vwd~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~l~s~~~d------g~v~iwd~~ 390 (445)
T 2ovr_B 325 MELKDNILVSGNADS------TVKIWDIKTGQCLQTLQG--PNKHQSAVTCLQFNKNFVITSSDD------GTVKLWDLK 390 (445)
T ss_dssp EEEETTEEEEEETTS------CEEEEETTTCCEEEEECS--TTSCSSCEEEEEECSSEEEEEETT------SEEEEEETT
T ss_pred EEEeCCEEEEEeCCC------eEEEEECCCCcEEEEEcc--CCCCCCCEEEEEECCCEEEEEeCC------CeEEEEECC
Confidence 344556667777543 488999887654332210 111223334455577777777753 468999998
Q ss_pred CCceEEec-CCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCC
Q 006645 332 TMTWDEID-AVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQT 383 (637)
Q Consensus 332 t~~W~~~~-~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t 383 (637)
+.+....- .....+..-.-.+++...++.++++|+.++. .-..+++||+..
T Consensus 391 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~-~~~~l~v~df~~ 442 (445)
T 2ovr_B 391 TGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT-EETKLLVLDFDV 442 (445)
T ss_dssp TCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSS-SCCEEEEEECCC
T ss_pred CCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCC-CccEEEEEECCC
Confidence 87754332 1100011111223334456667777776543 234588888764
No 119
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=93.54 E-value=0.92 Score=37.14 Aligned_cols=27 Identities=19% Similarity=0.257 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 006645 538 IQLKQDLTEAESQNTDLYKELQSVRGQ 564 (637)
Q Consensus 538 ~~l~~~l~e~e~~~~~~~~elq~~~~q 564 (637)
..|+.+|..+|+.+..++.+..+.++.
T Consensus 27 ~~L~~~L~~AEeaL~~Kq~~idelk~e 53 (110)
T 2v4h_A 27 EDLRQQLQQAEEALVAKQELIDKLKEE 53 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444444333
No 120
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=93.53 E-value=5.6 Score=38.25 Aligned_cols=150 Identities=6% Similarity=-0.083 Sum_probs=81.0
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe-CCEEEEEEccCCCCCccee
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW-ENKLLSIAGHTKDPSEIIQ 273 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~-~~~lyv~GG~~~~~~~~~~ 273 (637)
++.||+.... .+.+++||+. .....+... .....-++++.. ++.||+.... ...
T Consensus 67 ~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~~~-------------~~~~~~~~i~~~~~g~l~v~~~~------~~~ 121 (299)
T 2z2n_A 67 DGEVWFTENA-----ANKIGRITKK-GIIKEYTLP-------------NPDSAPYGITEGPNGDIWFTEMN------GNR 121 (299)
T ss_dssp TSCEEEEETT-----TTEEEEECTT-SCEEEEECS-------------STTCCEEEEEECTTSCEEEEETT------TTE
T ss_pred CCCEEEeCCC-----CCeEEEECCC-CcEEEEeCC-------------CcCCCceeeEECCCCCEEEEecC------Cce
Confidence 4678887532 1358899886 455444211 011112333333 5788887543 236
Q ss_pred EEEEECCCCceEeeccCCCCCCCCCceEEEEE-CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccE
Q 006645 274 VKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHA 352 (637)
Q Consensus 274 v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~ 352 (637)
+.+||+ ++......... ....-..++.. ++.+|+.... .+.+++||+ +.+...+.... ....-++
T Consensus 122 i~~~d~-~g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~-~g~~~~~~~~~---~~~~~~~ 187 (299)
T 2z2n_A 122 IGRITD-DGKIREYELPN---KGSYPSFITLGSDNALWFTENQ------NNAIGRITE-SGDITEFKIPT---PASGPVG 187 (299)
T ss_dssp EEEECT-TCCEEEEECSS---TTCCEEEEEECTTSCEEEEETT------TTEEEEECT-TCCEEEEECSS---TTCCEEE
T ss_pred EEEECC-CCCEEEecCCC---CCCCCceEEEcCCCCEEEEeCC------CCEEEEEcC-CCcEEEeeCCC---CCCccee
Confidence 889998 66665543211 11112233333 4678875421 356899999 77776653211 1112234
Q ss_pred EEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEec
Q 006645 353 AAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 353 ~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l 389 (637)
+++..++.||+.... .+.+++||+ +..+..+
T Consensus 188 i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~ 218 (299)
T 2z2n_A 188 ITKGNDDALWFVEII-----GNKIGRITT-SGEITEF 218 (299)
T ss_dssp EEECTTSSEEEEETT-----TTEEEEECT-TCCEEEE
T ss_pred EEECCCCCEEEEccC-----CceEEEECC-CCcEEEE
Confidence 455445668876532 246899999 6766654
No 121
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=93.50 E-value=6.7 Score=39.12 Aligned_cols=105 Identities=14% Similarity=0.144 Sum_probs=58.1
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLET 332 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t 332 (637)
++. ++.|+.+. .+.+||+.++.-...-. .......++.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 154 ~~~-l~s~s~d~------~i~~wd~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~sg~~d------~~v~~wd~~~ 215 (340)
T 1got_B 154 DNQ-IVTSSGDT------TCALWDIETGQQTTTFT-----GHTGDVMSLSLAPDTRLFVSGACD------ASAKLWDVRE 215 (340)
T ss_dssp TTE-EEEEETTS------CEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTT
T ss_pred CCc-EEEEECCC------cEEEEECCCCcEEEEEc-----CCCCceEEEEECCCCCEEEEEeCC------CcEEEEECCC
Confidence 455 45555433 48889998876543321 11112223333 45778888764 3588999887
Q ss_pred CceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCee
Q 006645 333 MTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEW 386 (637)
Q Consensus 333 ~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W 386 (637)
..-...-.. ....-.++++..++.+++.|+.+ ..+.+||+.+..-
T Consensus 216 ~~~~~~~~~----h~~~v~~v~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~ 260 (340)
T 1got_B 216 GMCRQTFTG----HESDINAICFFPNGNAFATGSDD-----ATCRLFDLRADQE 260 (340)
T ss_dssp CSEEEEECC----CSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEE
T ss_pred CeeEEEEcC----CcCCEEEEEEcCCCCEEEEEcCC-----CcEEEEECCCCcE
Confidence 654332111 11112234444556677777754 3578899887653
No 122
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=93.46 E-value=1.6 Score=44.55 Aligned_cols=151 Identities=14% Similarity=0.071 Sum_probs=75.8
Q ss_pred EEEECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCc
Q 006645 191 AAVVQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSE 270 (637)
Q Consensus 191 ~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~ 270 (637)
++...+..++.|+.+ ..+.+||+.+..-...-.. ...........-++.+++.|+.+.
T Consensus 212 ~~~~~~~~~~~~~~~-----g~i~~~d~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~l~~~~~d~---- 269 (425)
T 1r5m_A 212 VEWVDDDKFVIPGPK-----GAIFVYQITEKTPTGKLIG-------------HHGPISVLEFNDTNKLLLSASDDG---- 269 (425)
T ss_dssp CEEEETTEEEEECGG-----GCEEEEETTCSSCSEEECC-------------CSSCEEEEEEETTTTEEEEEETTS----
T ss_pred EEEcCCCEEEEEcCC-----CeEEEEEcCCCceeeeecc-------------CCCceEEEEECCCCCEEEEEcCCC----
Confidence 333334446666632 4689999987643221110 111111111122556677776543
Q ss_pred ceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE-CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCccc
Q 006645 271 IIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRS 349 (637)
Q Consensus 271 ~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~ 349 (637)
.+.+||+.+......-. .....-.+++.. ++ +++.|+.+ ..+.+||+.+..-...... ....
T Consensus 270 --~i~i~d~~~~~~~~~~~----~~~~~i~~~~~~~~~-~l~~~~~d------~~i~i~d~~~~~~~~~~~~----~~~~ 332 (425)
T 1r5m_A 270 --TLRIWHGGNGNSQNCFY----GHSQSIVSASWVGDD-KVISCSMD------GSVRLWSLKQNTLLALSIV----DGVP 332 (425)
T ss_dssp --CEEEECSSSBSCSEEEC----CCSSCEEEEEEETTT-EEEEEETT------SEEEEEETTTTEEEEEEEC----TTCC
T ss_pred --EEEEEECCCCccceEec----CCCccEEEEEECCCC-EEEEEeCC------CcEEEEECCCCcEeEeccc----CCcc
Confidence 48889887765333321 111111223333 44 66666643 4689999987654333211 1112
Q ss_pred ccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 350 DHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 350 ~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
-.+++...++.+++.|+.+ ..+.+||+.+..
T Consensus 333 i~~~~~s~~~~~l~~~~~d-----g~i~i~~~~~~~ 363 (425)
T 1r5m_A 333 IFAGRISQDGQKYAVAFMD-----GQVNVYDLKKLN 363 (425)
T ss_dssp EEEEEECTTSSEEEEEETT-----SCEEEEECHHHH
T ss_pred EEEEEEcCCCCEEEEEECC-----CeEEEEECCCCc
Confidence 2234444455577777653 357888876543
No 123
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=93.45 E-value=0.44 Score=61.88 Aligned_cols=29 Identities=14% Similarity=0.158 Sum_probs=14.8
Q ss_pred HHhHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 006645 516 IATLKAEKEELESSLSKEKLQSIQLKQDL 544 (637)
Q Consensus 516 ~~~l~~~~~~le~~~~e~~~~~~~l~~~l 544 (637)
+..++++..+.+.+|.++..+.+++-+++
T Consensus 1936 V~~l~~~L~~~~~~L~~k~~ea~~~l~~i 1964 (3245)
T 3vkg_A 1936 VKDLQVSLAQKNRELDVKNEQANQKLKQM 1964 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555555554443333
No 124
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=93.45 E-value=3.1 Score=41.53 Aligned_cols=148 Identities=13% Similarity=0.078 Sum_probs=75.7
Q ss_pred cEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCC
Q 006645 212 DMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYG 291 (637)
Q Consensus 212 ~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g 291 (637)
.++.+|..++++..+.... ........+..-+++||+.+... ....+++||+.++.+..+....
T Consensus 19 ~v~~~d~~tg~~~~~~~~~------------~~~~p~~~a~spdg~l~~~~~~~----~~~~v~~~~~~~g~~~~~~~~~ 82 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLA------------ATQNPTYLALSAKDCLYSVDKED----DEGGIAAWQIDGQTAHKLNTVV 82 (347)
T ss_dssp EEEEEETTTTEEEEEEEEE------------ECSCCCCEEECTTCEEEEEEEET----TEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEcCCCCeEEEeeeee------------ccCCcceEEEccCCeEEEEEecC----CCceEEEEEecCCcEEEeeeee
Confidence 3677788888887764432 01111112222367777776431 2357899999888876664310
Q ss_pred CCCCCCCceEEEEE-CC-EEEEEeCCCCCCCCCCceEEEECC-CCceEEec---CCCCCCCcc----cccEEEEEcCCEE
Q 006645 292 KPPVSRGGQSVTLV-GT-SLVIFGGEDAKRSLLNDLHILDLE-TMTWDEID---AVGVPPSPR----SDHAAAVHAERYL 361 (637)
Q Consensus 292 ~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~n~i~~yd~~-t~~W~~~~---~~~~~p~~r----~~h~~~~~~~~~l 361 (637)
.....-..++.. ++ .||+.+.. .+.+.+|++. +.....+. ..+..|.+| .-+++++..++.+
T Consensus 83 --~~~~~p~~~a~spdg~~l~~~~~~------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l 154 (347)
T 3hfq_A 83 --APGTPPAYVAVDEARQLVYSANYH------KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRL 154 (347)
T ss_dssp --EESCCCSEEEEETTTTEEEEEETT------TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCE
T ss_pred --cCCCCCEEEEECCCCCEEEEEeCC------CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcE
Confidence 001111123333 34 56665532 2457888875 33333332 222222222 2334555556667
Q ss_pred EEEeCCCCCCCcCcEEEEECC-CCeeEe
Q 006645 362 LIFGGGSHAACFNDLHVLDLQ-TMEWSR 388 (637)
Q Consensus 362 ~v~GG~~~~~~~~dl~~~d~~-t~~W~~ 388 (637)
|+.+..+ +.+++||+. +.....
T Consensus 155 ~v~~~~~-----~~v~~~~~~~~g~~~~ 177 (347)
T 3hfq_A 155 AVIDLGS-----DKVYVYNVSDAGQLSE 177 (347)
T ss_dssp EEEETTT-----TEEEEEEECTTSCEEE
T ss_pred EEEeCCC-----CEEEEEEECCCCcEEE
Confidence 7765432 468889887 555543
No 125
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=93.43 E-value=12 Score=41.75 Aligned_cols=144 Identities=15% Similarity=0.123 Sum_probs=78.1
Q ss_pred eEEecccCCCCCCCCcceeEEEECCEEEEEcccCCCcccCcEEEEEccCC--eEEEeeecccccCCCCCCCCCCCCcccc
Q 006645 172 QWIAPPISGQRPKARYEHGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSW--AWSKIQAKAVAESTESPSPALLTPCAGH 249 (637)
Q Consensus 172 ~W~~~~~~g~~p~~R~~~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~~~~~~~~~~~p~~r~~h 249 (637)
.|+..... ......+-++.++.||+... .+.++.+|..|+ .|+.-....... ...........
T Consensus 47 ~W~~~~~~----~~~~~~~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~-----~~~~~~~~~~~ 111 (668)
T 1kv9_A 47 AWYMDLDN----TRGLEATPLFHDGVIYTSMS------WSRVIAVDAASGKELWRYDPEVAKVK-----ARTSCCDAVNR 111 (668)
T ss_dssp EEEEECSC----CSCCCCCCEEETTEEEEEEG------GGEEEEEETTTCCEEEEECCCCCGGG-----GGGCTTCSCCC
T ss_pred EEEEECCC----CCCcccCCEEECCEEEEECC------CCeEEEEECCCChhceEECCCCCccc-----cccccccCCcc
Confidence 78864321 11123455678999999865 346999999885 587642211000 00000001122
Q ss_pred eEEEeCCEEEEEEccCCCCCcceeEEEEECCCCc--eEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEE
Q 006645 250 SLIPWENKLLSIAGHTKDPSEIIQVKVFDLQTCS--WSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHI 327 (637)
Q Consensus 250 s~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~ 327 (637)
+.+..+++||+... ...++.+|..|++ |+..... .........+.++.++.+|+-.+.. .......++.
T Consensus 112 ~~~~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~-~~~~~~~~~~P~v~~~~v~vg~~~~-~~~~~g~v~a 182 (668)
T 1kv9_A 112 GVALWGDKVYVGTL-------DGRLIALDAKTGKAIWSQQTTD-PAKPYSITGAPRVVKGKVIIGNGGA-EYGVRGFVSA 182 (668)
T ss_dssp CCEEEBTEEEEECT-------TSEEEEEETTTCCEEEEEECSC-TTSSCBCCSCCEEETTEEEECCBCT-TTCCBCEEEE
T ss_pred ceEEECCEEEEEcC-------CCEEEEEECCCCCEeeeeccCC-CCCcceecCCCEEECCEEEEeCCCC-CcCCCCEEEE
Confidence 34556888887532 2369999998875 8875321 0111112223345688877643221 1113467999
Q ss_pred EECCCCc--eEEec
Q 006645 328 LDLETMT--WDEID 339 (637)
Q Consensus 328 yd~~t~~--W~~~~ 339 (637)
||+.|.+ |+.-.
T Consensus 183 ~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 183 YDADTGKLAWRFYT 196 (668)
T ss_dssp EETTTCCEEEEEES
T ss_pred EECCCCcEEEEecc
Confidence 9998764 87653
No 126
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=93.41 E-value=1.3 Score=50.64 Aligned_cols=157 Identities=7% Similarity=0.016 Sum_probs=85.5
Q ss_pred CcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEE-eCCEEEEEEccCCCCCcceeEEEEECCCCceEeecc
Q 006645 211 SDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIP-WENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKT 289 (637)
Q Consensus 211 ~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~ 289 (637)
+.+++||+.+++|..+..... + ...+.... .++.. -++.||+... ..+++||+.+..+ ....
T Consensus 471 ~Gl~~~~~~~~~~~~~~~~~~------~-~~~~~~~i-~~i~~d~~g~lWigt~--------~Gl~~~~~~~~~~-~~~~ 533 (795)
T 4a2l_A 471 SALVRFNPEQRSFTTIEKEKD------G-TPVVSKQI-TTLFRDSHKRLWIGGE--------EGLSVFKQEGLDI-QKAS 533 (795)
T ss_dssp SCEEEEETTTTEEEECCBCTT------C-CBCCCCCE-EEEEECTTCCEEEEES--------SCEEEEEEETTEE-EECC
T ss_pred CceeEEeCCCCeEEEcccccc------c-cccCCceE-EEEEECCCCCEEEEeC--------CceEEEeCCCCeE-EEec
Confidence 348999999999987743200 0 00111111 12222 2567877543 1488999998888 4431
Q ss_pred CCCCC-CCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeC
Q 006645 290 YGKPP-VSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGG 366 (637)
Q Consensus 290 ~g~~p-~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG 366 (637)
....+ .+.....+... ++.|++-.. +.+++||+.+.++.........|... .++++...++.|++.+.
T Consensus 534 ~~~~~~l~~~~i~~i~~d~~g~lWigT~--------~Gl~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g~lWi~t~ 604 (795)
T 4a2l_A 534 ILPVSNVTKLFTNCIYEASNGIIWVGTR--------EGFYCFNEKDKQIKRYNTTNGLPNNV-VYGILEDSFGRLWLSTN 604 (795)
T ss_dssp CSCSCGGGGSCEEEEEECTTSCEEEEES--------SCEEEEETTTTEEEEECGGGTCSCSC-EEEEEECTTSCEEEEET
T ss_pred CCCCCCCCCCeeEEEEECCCCCEEEEeC--------CCceeECCCCCcEEEeCCCCCCchhh-eEEEEECCCCCEEEEcC
Confidence 10011 11111222222 456776332 24899999999998875432233322 23444444566887653
Q ss_pred CCCCCCcCcEEEEECCCCeeEecccCCCCCCCCc
Q 006645 367 GSHAACFNDLHVLDLQTMEWSRPTQQGEIPTPRA 400 (637)
Q Consensus 367 ~~~~~~~~dl~~~d~~t~~W~~l~~~~~~p~~R~ 400 (637)
+.+.+||+.+..+........++...+
T Consensus 605 -------~Gl~~~~~~~~~~~~~~~~dGl~~~~f 631 (795)
T 4a2l_A 605 -------RGISCFNPETEKFRNFTESDGLQSNQF 631 (795)
T ss_dssp -------TEEEEEETTTTEEEEECGGGTCSCSCE
T ss_pred -------CceEEEcCCCCcEEEcCCcCCCccccC
Confidence 358999999999887643323444433
No 127
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=93.29 E-value=6.1 Score=38.03 Aligned_cols=159 Identities=8% Similarity=0.032 Sum_probs=83.1
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEE--eCCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIP--WENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~--~~~~lyv~GG~~~~~~~~~ 272 (637)
++.|||.+.. ...+.+||+.......+...+ ........-++++. -++.||+.+... ..
T Consensus 40 ~g~l~v~~~~-----~~~i~~~d~~g~~~~~~~~~~---------~~~~~~~~p~~i~~~~~~g~l~v~~~~~-----~~ 100 (286)
T 1q7f_A 40 QNDIIVADTN-----NHRIQIFDKEGRFKFQFGECG---------KRDSQLLYPNRVAVVRNSGDIIVTERSP-----TH 100 (286)
T ss_dssp TCCEEEEEGG-----GTEEEEECTTSCEEEEECCBS---------SSTTCBSSEEEEEEETTTTEEEEEECGG-----GC
T ss_pred CCCEEEEECC-----CCEEEEECCCCcEEEEecccC---------CCcccccCceEEEEEcCCCeEEEEcCCC-----CC
Confidence 4678887542 246889998855444432211 00000111123333 267899887421 24
Q ss_pred eEEEEECCCCceEeeccCCCCCCCCCceEEEEE-CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCccccc
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDH 351 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h 351 (637)
.+.+||+....-..+.. +.. ..-+.++.. ++.+|+.... .+.|++||+.......+...+.. ..-.
T Consensus 101 ~i~~~d~~g~~~~~~~~-~~~---~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~~~~~~~~~~~---~~p~ 167 (286)
T 1q7f_A 101 QIQIYNQYGQFVRKFGA-TIL---QHPRGVTVDNKGRIIVVECK------VMRVIIFDQNGNVLHKFGCSKHL---EFPN 167 (286)
T ss_dssp EEEEECTTSCEEEEECT-TTC---SCEEEEEECTTSCEEEEETT------TTEEEEECTTSCEEEEEECTTTC---SSEE
T ss_pred EEEEECCCCcEEEEecC-ccC---CCceEEEEeCCCCEEEEECC------CCEEEEEcCCCCEEEEeCCCCcc---CCcE
Confidence 68899955443333321 111 111223332 5678887542 35689999876555444322111 1223
Q ss_pred EEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecc
Q 006645 352 AAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPT 390 (637)
Q Consensus 352 ~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~ 390 (637)
++++..++.|||.+.. .+.|++||+.......+.
T Consensus 168 ~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~~~ 201 (286)
T 1q7f_A 168 GVVVNDKQEIFISDNR-----AHCVKVFNYEGQYLRQIG 201 (286)
T ss_dssp EEEECSSSEEEEEEGG-----GTEEEEEETTCCEEEEES
T ss_pred EEEECCCCCEEEEECC-----CCEEEEEcCCCCEEEEEc
Confidence 4555556778887643 246899998766554443
No 128
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=93.29 E-value=2.7 Score=42.55 Aligned_cols=149 Identities=10% Similarity=0.058 Sum_probs=75.8
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe---CCEEEEEEccCCCCCcc
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW---ENKLLSIAGHTKDPSEI 271 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~---~~~lyv~GG~~~~~~~~ 271 (637)
++.+++.|+.++ .+.++|+.+++-... .. ..... -.++.+ +..+++.|+.+.
T Consensus 138 dg~~l~sgs~d~-----~i~iwd~~~~~~~~~--~~-----------~h~~~--V~~~~~~~~~~~~l~s~s~D~----- 192 (344)
T 4gqb_B 138 SGTQAVSGSKDI-----CIKVWDLAQQVVLSS--YR-----------AHAAQ--VTCVAASPHKDSVFLSCSEDN----- 192 (344)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTTEEEEE--EC-----------CCSSC--EEEEEECSSCTTEEEEEETTS-----
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCcEEEE--Ec-----------CcCCc--eEEEEecCCCCCceeeecccc-----
Confidence 456667776433 588899988754322 11 01111 122222 335777787654
Q ss_pred eeEEEEECCCCceEeeccCCCCCCCCCceEEEEE---CCEEEEEeCCCCCCCCCCceEEEECCCCce-EEecCCCCCCCc
Q 006645 272 IQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV---GTSLVIFGGEDAKRSLLNDLHILDLETMTW-DEIDAVGVPPSP 347 (637)
Q Consensus 272 ~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W-~~~~~~~~~p~~ 347 (637)
.|.+||+.+.+-...-. .........++.+ ++.+++.|+.+ ..|.+||+.+.+- ..+.. ..
T Consensus 193 -~v~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~l~sg~~d------g~v~~wd~~~~~~~~~~~~-----h~ 257 (344)
T 4gqb_B 193 -RILLWDTRCPKPASQIG---CSAPGYLPTSLAWHPQQSEVFVFGDEN------GTVSLVDTKSTSCVLSSAV-----HS 257 (344)
T ss_dssp -CEEEEETTSSSCEEECC-------CCCEEEEEECSSCTTEEEEEETT------SEEEEEESCC--CCEEEEC-----CS
T ss_pred -ccccccccccceeeeee---cceeeccceeeeecCCCCcceEEeccC------CcEEEEECCCCcEEEEEcC-----CC
Confidence 48889998776433311 1111111222332 45688888753 3588899876542 12211 11
Q ss_pred ccccEEEEEcC-CEEEEEeCCCCCCCcCcEEEEECCCCeeEe
Q 006645 348 RSDHAAAVHAE-RYLLIFGGGSHAACFNDLHVLDLQTMEWSR 388 (637)
Q Consensus 348 r~~h~~~~~~~-~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~ 388 (637)
..-.++++..+ ..+++.|+.+ ..|.+||..+..-..
T Consensus 258 ~~v~~v~fsp~g~~~lasgs~D-----~~i~vwd~~~~~~~~ 294 (344)
T 4gqb_B 258 QCVTGLVFSPHSVPFLASLSED-----CSLAVLDSSLSELFR 294 (344)
T ss_dssp SCEEEEEECSSSSCCEEEEETT-----SCEEEECTTCCEEEE
T ss_pred CCEEEEEEccCCCeEEEEEeCC-----CeEEEEECCCCcEEE
Confidence 11123333333 3567777654 347889988776443
No 129
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=93.22 E-value=1.3 Score=45.15 Aligned_cols=149 Identities=13% Similarity=0.071 Sum_probs=77.0
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe---CCEEEEEEccCCCCCcc
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW---ENKLLSIAGHTKDPSEI 271 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~---~~~lyv~GG~~~~~~~~ 271 (637)
++..++.|+.++ .+.++|+.+.+-...-.. ... .-.++.+ ++.+++.||.+.
T Consensus 150 dg~~l~sgs~dg-----~v~iwd~~~~~~~~~~~~-------------h~~--~v~~v~~s~~~~~~~~s~~~dg----- 204 (357)
T 4g56_B 150 DGTQAVSGGKDF-----SVKVWDLSQKAVLKSYNA-------------HSS--EVNCVAACPGKDTIFLSCGEDG----- 204 (357)
T ss_dssp SSSEEEEEETTS-----CEEEEETTTTEEEEEECC-------------CSS--CEEEEEECTTCSSCEEEEETTS-----
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCcEEEEEcC-------------CCC--CEEEEEEccCCCceeeeeccCC-----
Confidence 456677776433 588899988764432110 111 1122222 235777777654
Q ss_pred eeEEEEECCCCceEeeccCCCCCCCCCceEEEEE---CCEEEEEeCCCCCCCCCCceEEEECCCCceE-EecCCCCCCCc
Q 006645 272 IQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV---GTSLVIFGGEDAKRSLLNDLHILDLETMTWD-EIDAVGVPPSP 347 (637)
Q Consensus 272 ~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~-~~~~~~~~p~~ 347 (637)
.+.+||+.+.+-..... .........++.+ ++.+++.|+.+ ..|.+||+.+.+-. .+.. ..
T Consensus 205 -~v~~wd~~~~~~~~~~~---~~~~~~~v~~v~~sp~~~~~la~g~~d------~~i~~wd~~~~~~~~~~~~-----~~ 269 (357)
T 4g56_B 205 -RILLWDTRKPKPATRID---FCASDTIPTSVTWHPEKDDTFACGDET------GNVSLVNIKNPDSAQTSAV-----HS 269 (357)
T ss_dssp -CEEECCTTSSSCBCBCC---CTTCCSCEEEEEECTTSTTEEEEEESS------SCEEEEESSCGGGCEEECC-----CS
T ss_pred -ceEEEECCCCceeeeee---eccccccccchhhhhcccceEEEeecc------cceeEEECCCCcEeEEEec-----cc
Confidence 47888887765333211 1111122233333 35677787753 45889998765422 2211 11
Q ss_pred ccccEEEEEc-CCEEEEEeCCCCCCCcCcEEEEECCCCeeEe
Q 006645 348 RSDHAAAVHA-ERYLLIFGGGSHAACFNDLHVLDLQTMEWSR 388 (637)
Q Consensus 348 r~~h~~~~~~-~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~ 388 (637)
..-.++++.. ++.+++.|+.+ ..|.+||+.+.....
T Consensus 270 ~~v~~l~~sp~~~~~lasgs~D-----~~i~iwd~~~~~~~~ 306 (357)
T 4g56_B 270 QNITGLAYSYHSSPFLASISED-----CTVAVLDADFSEVFR 306 (357)
T ss_dssp SCEEEEEECSSSSCCEEEEETT-----SCEEEECTTSCEEEE
T ss_pred eeEEEEEEcCCCCCEEEEEeCC-----CEEEEEECCCCcEeE
Confidence 1112233322 34566677654 348899988776543
No 130
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=93.20 E-value=5.4 Score=40.74 Aligned_cols=104 Identities=15% Similarity=0.163 Sum_probs=56.2
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~ 272 (637)
++.+++.|+.+ ..+.+||+.+..-...-. .....-.++.+ ++.+++.|+.+.
T Consensus 108 ~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~---------------~h~~~v~~~~~~~~~~~l~s~s~d~------ 161 (420)
T 3vl1_A 108 QMRRFILGTTE-----GDIKVLDSNFNLQREIDQ---------------AHVSEITKLKFFPSGEALISSSQDM------ 161 (420)
T ss_dssp SSCEEEEEETT-----SCEEEECTTSCEEEEETT---------------SSSSCEEEEEECTTSSEEEEEETTS------
T ss_pred CCCEEEEEECC-----CCEEEEeCCCcceeeecc---------------cccCccEEEEECCCCCEEEEEeCCC------
Confidence 56777777743 358889988765443311 11111222333 556677777643
Q ss_pred eEEEEECCCCceEeeccCCCCCCCCCceEEEE-E-CCEEEEEeCCCCCCCCCCceEEEECCCCce
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTL-V-GTSLVIFGGEDAKRSLLNDLHILDLETMTW 335 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~-~-~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W 335 (637)
.+.+||+.+.+-...-. .......++. . ++.+++.|+.+ ..+.+||+.+.+-
T Consensus 162 ~i~iwd~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~~~d------~~v~iwd~~~~~~ 215 (420)
T 3vl1_A 162 QLKIWSVKDGSNPRTLI-----GHRATVTDIAIIDRGRNVLSASLD------GTIRLWECGTGTT 215 (420)
T ss_dssp EEEEEETTTCCCCEEEE-----CCSSCEEEEEEETTTTEEEEEETT------SCEEEEETTTTEE
T ss_pred eEEEEeCCCCcCceEEc-----CCCCcEEEEEEcCCCCEEEEEcCC------CcEEEeECCCCce
Confidence 58899987754222111 1111122222 2 45666677653 3588999887653
No 131
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=93.17 E-value=9.3 Score=41.83 Aligned_cols=139 Identities=17% Similarity=0.213 Sum_probs=74.4
Q ss_pred eEEecccCCCCCCCCcceeEEEECCEEEEEcccCCCcccCcEEEEEccCC--eEEEeeecccccCCCCCCCCCCCCcc--
Q 006645 172 QWIAPPISGQRPKARYEHGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSW--AWSKIQAKAVAESTESPSPALLTPCA-- 247 (637)
Q Consensus 172 ~W~~~~~~g~~p~~R~~~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~~~~~~~~~~~p~~r~-- 247 (637)
.|..... .........+.++.++.||+.+.. +.++.+|..|+ .|+.-.... .....++
T Consensus 47 ~W~~~~~--~~~~~g~~~~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~----------~~~~~~~~~ 108 (582)
T 1flg_A 47 AWSYSFG--DEKQRGQESQAIVSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLP----------DDIRPCCDV 108 (582)
T ss_dssp EEEEECC--TTCCSCCCCCCEEETTEEEEEETT------TEEEEEESSSCCEEEEEECCCC----------TTCCCSSCS
T ss_pred EEEEECC--CccCCcceeccEEECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCC----------ccccccccc
Confidence 7886442 111111234556789999998652 24999999886 487643221 0000111
Q ss_pred -cceEEEeCCEEEEEEccCCCCCcceeEEEEECCCCc--eEeeccCCCCCCC-CCceEEEEECC------EEEEEeCCCC
Q 006645 248 -GHSLIPWENKLLSIAGHTKDPSEIIQVKVFDLQTCS--WSTLKTYGKPPVS-RGGQSVTLVGT------SLVIFGGEDA 317 (637)
Q Consensus 248 -~hs~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~g~~p~~-r~~~~~~~~~~------~lyv~GG~~~ 317 (637)
..+.+..+++||+... ...++.+|..|++ |+.-... .... ....+-++.++ .+| +|....
T Consensus 109 ~~~g~a~~~~~v~~~t~-------dg~l~AlD~~TG~~~W~~~~~~--~~~~~~~~~sP~v~~~~~~G~~~v~-vg~~~~ 178 (582)
T 1flg_A 109 VNRGAAIYGDKVFFGTL-------DASVVALNKNTGKVVWKKKFAD--HGAGYTMTGAPTIVKDGKTGKVLLI-HGSSGD 178 (582)
T ss_dssp CCCCCEEETTEEEEEET-------TTEEEEEESSSCCEEEEEECSC--GGGTCBCCSCCEEEECTTTCCEEEE-ECCBCG
T ss_pred CCCccEEECCEEEEEeC-------CCEEEEEECCCCCEEeeecCCC--CCcCcccccCCEEeCCCcCCcEEEE-Eecccc
Confidence 1234567888887532 2368999998875 8765321 0000 01112233444 444 443221
Q ss_pred CCCCCCceEEEECCCCc--eEEe
Q 006645 318 KRSLLNDLHILDLETMT--WDEI 338 (637)
Q Consensus 318 ~~~~~n~i~~yd~~t~~--W~~~ 338 (637)
.......++.||+.|.+ |...
T Consensus 179 e~~~~g~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 179 EFGVVGRLFARDPDTGEEIWMRP 201 (582)
T ss_dssp GGCCBCEEEEECTTTCCEEEEEE
T ss_pred ccCCCCEEEEEECCCCCEEeecC
Confidence 11124679999998764 8654
No 132
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=93.11 E-value=3.5 Score=40.25 Aligned_cols=156 Identities=11% Similarity=0.151 Sum_probs=77.9
Q ss_pred CEEEEEcccCCCcccCcEEEEEccCCeEEEe-eecccccCCCCCCCCCCCCcccceEEE-eCCEEEEEEccCC-------
Q 006645 196 DKMYIYGGNHNGRYLSDMHILDLRSWAWSKI-QAKAVAESTESPSPALLTPCAGHSLIP-WENKLLSIAGHTK------- 266 (637)
Q Consensus 196 ~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~-~~~~~~~~~~~~~~~~p~~r~~hs~v~-~~~~lyv~GG~~~------- 266 (637)
+.|||.+.. +.+++||+. ++...+ .... ...+.... +.++. -+++||+......
T Consensus 83 g~l~v~~~~------~~l~~~d~~-g~~~~~~~~~~---------~~~~~~~~-~~i~~d~~g~l~v~~~~~~~~~~~~~ 145 (314)
T 1pjx_A 83 NQLFVADMR------LGLLVVQTD-GTFEEIAKKDS---------EGRRMQGC-NDCAFDYEGNLWITAPAGEVAPADYT 145 (314)
T ss_dssp SEEEEEETT------TEEEEEETT-SCEEECCSBCT---------TSCBCBCC-CEEEECTTSCEEEEECBCBCTTSCCC
T ss_pred CcEEEEECC------CCEEEEeCC-CCEEEEEeccC---------CCccccCC-cCEEECCCCCEEEEecCccccccccc
Confidence 688887641 368999998 776654 3211 00111111 22222 2678887664321
Q ss_pred --CCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE----C-C-EEEEEeCCCCCCCCCCceEEEECC-CCceEE
Q 006645 267 --DPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV----G-T-SLVIFGGEDAKRSLLNDLHILDLE-TMTWDE 337 (637)
Q Consensus 267 --~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~----~-~-~lyv~GG~~~~~~~~n~i~~yd~~-t~~W~~ 337 (637)
.......+++||+. ++...+... ... ....+.. . + .||+.... .+.|++||+. +.++..
T Consensus 146 ~~~~~~~~~l~~~~~~-g~~~~~~~~--~~~---~~~i~~~~~~d~dg~~l~v~~~~------~~~i~~~~~~~~g~~~~ 213 (314)
T 1pjx_A 146 RSMQEKFGSIYCFTTD-GQMIQVDTA--FQF---PNGIAVRHMNDGRPYQLIVAETP------TKKLWSYDIKGPAKIEN 213 (314)
T ss_dssp BTTSSSCEEEEEECTT-SCEEEEEEE--ESS---EEEEEEEECTTSCEEEEEEEETT------TTEEEEEEEEETTEEEE
T ss_pred ccccCCCCeEEEECCC-CCEEEeccC--CCC---cceEEEecccCCCCCEEEEEECC------CCeEEEEECCCCCcccc
Confidence 11223679999987 665544221 111 1233333 2 3 46666432 3568999876 444322
Q ss_pred ecCCCCCCCc--ccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 338 IDAVGVPPSP--RSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 338 ~~~~~~~p~~--r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
.......+.. ..-..+++..++.|||....+ +.|.+||+.+..
T Consensus 214 ~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~-----~~i~~~d~~~g~ 258 (314)
T 1pjx_A 214 KKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS-----SHIEVFGPDGGQ 258 (314)
T ss_dssp EEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT-----TEEEEECTTCBS
T ss_pred ceEEEECCCCCCCCCCceEECCCCCEEEEEcCC-----CEEEEEcCCCCc
Confidence 1110001111 112344555566788875321 358999988543
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=93.09 E-value=4.5 Score=38.49 Aligned_cols=146 Identities=11% Similarity=-0.022 Sum_probs=78.1
Q ss_pred cCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcceeEEEEECCC-CceEeec
Q 006645 210 LSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQVKVFDLQT-CSWSTLK 288 (637)
Q Consensus 210 ~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t-~~W~~~~ 288 (637)
...++.+|+.++....+.... .........-+++.+++++. ..++++|+.+ .....+.
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~--------------~~v~~~~~spdg~~l~~~~~-------~~i~~~d~~~~~~~~~~~ 79 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTP--------------ELFEAPNWSPDGKYLLLNSE-------GLLYRLSLAGDPSPEKVD 79 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEES--------------SCCEEEEECTTSSEEEEEET-------TEEEEEESSSCCSCEECC
T ss_pred ceeEEEEeCCCCceeeeccCC--------------cceEeeEECCCCCEEEEEcC-------CeEEEEeCCCCCCceEec
Confidence 457999999998877654321 11111112225565666542 2699999998 7766654
Q ss_pred cCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEEEEcC-CEEEEEeCC
Q 006645 289 TYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAE-RYLLIFGGG 367 (637)
Q Consensus 289 ~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~-~~l~v~GG~ 367 (637)
.. .........+..-+++.+++++.... ....||.+++.+.....+... .. .+.+....+ ..|++.++.
T Consensus 80 ~~--~~~~~~~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~----~~--~~~~~~spdg~~l~~~~~~ 149 (297)
T 2ojh_A 80 TG--FATICNNDHGISPDGALYAISDKVEF--GKSAIYLLPSTGGTPRLMTKN----LP--SYWHGWSPDGKSFTYCGIR 149 (297)
T ss_dssp CT--TCCCBCSCCEECTTSSEEEEEECTTT--SSCEEEEEETTCCCCEECCSS----SS--EEEEEECTTSSEEEEEEEE
T ss_pred cc--cccccccceEECCCCCEEEEEEeCCC--CcceEEEEECCCCceEEeecC----CC--ccceEECCCCCEEEEEECC
Confidence 31 11111111122225556666654322 246799999888776655422 11 233344434 445545543
Q ss_pred CCCCCcCcEEEEECCCCeeEec
Q 006645 368 SHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 368 ~~~~~~~dl~~~d~~t~~W~~l 389 (637)
++ ...+|.+|+.+.....+
T Consensus 150 ~~---~~~l~~~~~~~~~~~~~ 168 (297)
T 2ojh_A 150 DQ---VFDIYSMDIDSGVETRL 168 (297)
T ss_dssp TT---EEEEEEEETTTCCEEEC
T ss_pred CC---ceEEEEEECCCCcceEc
Confidence 22 13578888877766655
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=93.03 E-value=3.9 Score=40.25 Aligned_cols=152 Identities=3% Similarity=-0.007 Sum_probs=75.6
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeE-EEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcc
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAW-SKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEI 271 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W-~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~ 271 (637)
+..||+.+... +.++++|+.+++. ....... ..+ .++++.. +.+|| .+... ...
T Consensus 51 g~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~------------~~~--~~~~~~s~dg~~l~-~~~~~---~~~ 107 (331)
T 3u4y_A 51 CSNVVVTSDFC-----QTLVQIETQLEPPKVVAIQEG------------QSS--MADVDITPDDQFAV-TVTGL---NHP 107 (331)
T ss_dssp SCEEEEEESTT-----CEEEEEECSSSSCEEEEEEEC------------SSC--CCCEEECTTSSEEE-ECCCS---SSS
T ss_pred CCEEEEEeCCC-----CeEEEEECCCCceeEEecccC------------CCC--ccceEECCCCCEEE-EecCC---CCc
Confidence 34577776522 3799999998875 2221111 111 1212222 34566 33221 112
Q ss_pred eeEEEEECCCCceEeeccCCCCCCCCCceEEEEE-CC-EEEEEeCCCCCCCCCCc-eEEEECCCCce-EEecCCCCCCCc
Q 006645 272 IQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GT-SLVIFGGEDAKRSLLND-LHILDLETMTW-DEIDAVGVPPSP 347 (637)
Q Consensus 272 ~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~n~-i~~yd~~t~~W-~~~~~~~~~p~~ 347 (637)
..+.+||+.+++....-+.+.. .+.++.. ++ .||+.+.. .+. +.+|++....- ...... ..+..
T Consensus 108 ~~i~v~d~~~~~~~~~~~~~~~-----~~~~~~spdg~~l~~~~~~------~~~~i~~~~~~~~g~~~~~~~~-~~~~~ 175 (331)
T 3u4y_A 108 FNMQSYSFLKNKFISTIPIPYD-----AVGIAISPNGNGLILIDRS------SANTVRRFKIDADGVLFDTGQE-FISGG 175 (331)
T ss_dssp CEEEEEETTTTEEEEEEECCTT-----EEEEEECTTSSCEEEEEET------TTTEEEEEEECTTCCEEEEEEE-EECSS
T ss_pred ccEEEEECCCCCeEEEEECCCC-----ccceEECCCCCEEEEEecC------CCceEEEEEECCCCcEeecCCc-cccCC
Confidence 3799999998876554332211 1333333 33 57776543 245 77777654321 111000 00111
Q ss_pred ccccEEEEEcCC-EEEEEeCCCCCCCcCcEEEEECCCCee
Q 006645 348 RSDHAAAVHAER-YLLIFGGGSHAACFNDLHVLDLQTMEW 386 (637)
Q Consensus 348 r~~h~~~~~~~~-~l~v~GG~~~~~~~~dl~~~d~~t~~W 386 (637)
..-+.+++..++ +||+.+..+ +.+.+||+.+...
T Consensus 176 ~~~~~~~~spdg~~l~v~~~~~-----~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 176 TRPFNITFTPDGNFAFVANLIG-----NSIGILETQNPEN 210 (331)
T ss_dssp SSEEEEEECTTSSEEEEEETTT-----TEEEEEECSSTTS
T ss_pred CCccceEECCCCCEEEEEeCCC-----CeEEEEECCCCcc
Confidence 222344554444 577766432 4689999987664
No 135
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=93.01 E-value=3.7 Score=40.91 Aligned_cols=163 Identities=10% Similarity=0.075 Sum_probs=77.9
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCC-EEEEEEccCCCCCccee
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWEN-KLLSIAGHTKDPSEIIQ 273 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~-~lyv~GG~~~~~~~~~~ 273 (637)
+++||+.+... ..+.+++||+.++.+..+..... ......+.++.-++ .||+.+.. ...
T Consensus 50 dg~l~~~~~~~---~~~~v~~~~~~~g~~~~~~~~~~-----------~~~~p~~~a~spdg~~l~~~~~~------~~~ 109 (347)
T 3hfq_A 50 KDCLYSVDKED---DEGGIAAWQIDGQTAHKLNTVVA-----------PGTPPAYVAVDEARQLVYSANYH------KGT 109 (347)
T ss_dssp TCEEEEEEEET---TEEEEEEEEEETTEEEEEEEEEE-----------ESCCCSEEEEETTTTEEEEEETT------TTE
T ss_pred CCeEEEEEecC---CCceEEEEEecCCcEEEeeeeec-----------CCCCCEEEEECCCCCEEEEEeCC------CCE
Confidence 56777775421 12568999998888877654210 01111222223344 56665532 135
Q ss_pred EEEEECC-CCceEeec---cCCCCCCCCC---ceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECC-CCceEEecCCCC
Q 006645 274 VKVFDLQ-TCSWSTLK---TYGKPPVSRG---GQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLE-TMTWDEIDAVGV 343 (637)
Q Consensus 274 v~~yd~~-t~~W~~~~---~~g~~p~~r~---~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~-t~~W~~~~~~~~ 343 (637)
+.+||+. ++....+. ..+..|.+|. ...++.+ ++++|+.+.. .+.+++|++. +.....+....
T Consensus 110 v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~------~~~v~~~~~~~~g~~~~~~~~~- 182 (347)
T 3hfq_A 110 AEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG------SDKVYVYNVSDAGQLSEQSVLT- 182 (347)
T ss_dssp EEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT------TTEEEEEEECTTSCEEEEEEEE-
T ss_pred EEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC------CCEEEEEEECCCCcEEEeeeEE-
Confidence 7778874 33333332 2222222221 1112233 4567765532 3568999988 55555432110
Q ss_pred CCCcccccEEEEEcCC-EEEEEeCCCCCCCcCcEEEEECC--CCeeEec
Q 006645 344 PPSPRSDHAAAVHAER-YLLIFGGGSHAACFNDLHVLDLQ--TMEWSRP 389 (637)
Q Consensus 344 ~p~~r~~h~~~~~~~~-~l~v~GG~~~~~~~~dl~~~d~~--t~~W~~l 389 (637)
.+....-..+++..++ +||+.+..+ +.+.+|++. +..+..+
T Consensus 183 ~~~g~~p~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~~~g~~~~~ 226 (347)
T 3hfq_A 183 MEAGFGPRHLVFSPDGQYAFLAGELS-----SQIASLKYDTQTGAFTQL 226 (347)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTT-----TEEEEEEEETTTTEEEEE
T ss_pred cCCCCCCceEEECCCCCEEEEEeCCC-----CEEEEEEecCCCCceEEe
Confidence 1111111234444444 577765432 345555544 5666544
No 136
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=93.00 E-value=1.6 Score=35.15 Aligned_cols=50 Identities=24% Similarity=0.340 Sum_probs=21.7
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHh
Q 006645 539 QLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQT 588 (637)
Q Consensus 539 ~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~ 588 (637)
.+++++..++.++...+.++......|..++.+....|.+...+.+.|+.
T Consensus 9 ~lre~l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEe 58 (97)
T 2eqb_B 9 QLKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVED 58 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444444444444444444444444444443
No 137
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=92.92 E-value=5.6 Score=38.71 Aligned_cols=163 Identities=12% Similarity=0.098 Sum_probs=81.2
Q ss_pred CCEEEEEccc--CCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe-C-CEEEEEEccCCCCCc
Q 006645 195 QDKMYIYGGN--HNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW-E-NKLLSIAGHTKDPSE 270 (637)
Q Consensus 195 ~~~lyv~GG~--~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~-~-~~lyv~GG~~~~~~~ 270 (637)
++.||+.++. ..+...+.+++||+.++++..+.... .. .....-++++.. + ++||+....
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~---------~~-~~~~~~~~i~~~~~~g~l~v~~~~------ 91 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPE---------VN-GYGGIPAGCQCDRDANQLFVADMR------ 91 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCE---------ET-TEECCEEEEEECSSSSEEEEEETT------
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecc---------cC-CCCCCCceEEEecCCCcEEEEECC------
Confidence 5678887110 00112246999999998887653210 00 000111223332 4 788887642
Q ss_pred ceeEEEEECCCCceEee-ccCCCCCCCCCceEEEEE-CCEEEEEeCCCC---------CCCCCCceEEEECCCCceEEec
Q 006645 271 IIQVKVFDLQTCSWSTL-KTYGKPPVSRGGQSVTLV-GTSLVIFGGEDA---------KRSLLNDLHILDLETMTWDEID 339 (637)
Q Consensus 271 ~~~v~~yd~~t~~W~~~-~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~---------~~~~~n~i~~yd~~t~~W~~~~ 339 (637)
+.+.+||+. ++...+ ...........-+.++.. ++.+|+...... .....+.+++||+. .+...+.
T Consensus 92 -~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~ 168 (314)
T 1pjx_A 92 -LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD 168 (314)
T ss_dssp -TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE
T ss_pred -CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec
Confidence 258899998 776655 321111111111222222 567887654321 11123578999987 5555442
Q ss_pred CCCCCCCcccccEEEEE----cCC-EEEEEeCCCCCCCcCcEEEEECC-CCee
Q 006645 340 AVGVPPSPRSDHAAAVH----AER-YLLIFGGGSHAACFNDLHVLDLQ-TMEW 386 (637)
Q Consensus 340 ~~~~~p~~r~~h~~~~~----~~~-~l~v~GG~~~~~~~~dl~~~d~~-t~~W 386 (637)
.. .......++. .++ .||+.... .+.+++||+. +..+
T Consensus 169 ~~-----~~~~~~i~~~~~~d~dg~~l~v~~~~-----~~~i~~~~~~~~g~~ 211 (314)
T 1pjx_A 169 TA-----FQFPNGIAVRHMNDGRPYQLIVAETP-----TKKLWSYDIKGPAKI 211 (314)
T ss_dssp EE-----ESSEEEEEEEECTTSCEEEEEEEETT-----TTEEEEEEEEETTEE
T ss_pred cC-----CCCcceEEEecccCCCCCEEEEEECC-----CCeEEEEECCCCCcc
Confidence 11 0111334444 454 57776532 2468889875 4443
No 138
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=92.90 E-value=6.9 Score=37.57 Aligned_cols=150 Identities=9% Similarity=-0.010 Sum_probs=81.7
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe-CCEEEEEEccCCCCCccee
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW-ENKLLSIAGHTKDPSEIIQ 273 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~-~~~lyv~GG~~~~~~~~~~ 273 (637)
++.||+.... .+.+.+||+. .+...+.... ....-++++.. ++.||+.... ...
T Consensus 30 ~g~l~v~~~~-----~~~v~~~~~~-~~~~~~~~~~-------------~~~~~~~i~~~~~g~l~v~~~~------~~~ 84 (300)
T 2qc5_A 30 DGKVWFTQHK-----ANKISSLDQS-GRIKEFEVPT-------------PDAKVMCLIVSSLGDIWFTENG------ANK 84 (300)
T ss_dssp TSCEEEEETT-----TTEEEEECTT-SCEEEEECSS-------------TTCCEEEEEECTTSCEEEEETT------TTE
T ss_pred CCCEEEEcCC-----CCeEEEECCC-CceEEEECCC-------------CCCcceeEEECCCCCEEEEecC------CCe
Confidence 4778886531 2468899988 6666543210 01111223332 5688886532 236
Q ss_pred EEEEECCCCceEeeccCCCCCCCCCceEEEEE-CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccE
Q 006645 274 VKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHA 352 (637)
Q Consensus 274 v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~ 352 (637)
+.+||+. +.+....... ....-+.++.. ++.+|+.... .+.+++||+. .+........ ....-++
T Consensus 85 v~~~d~~-g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g~~~~~~~~~---~~~~~~~ 150 (300)
T 2qc5_A 85 IGKLSKK-GGFTEYPLPQ---PDSGPYGITEGLNGDIWFTQLN------GDRIGKLTAD-GTIYEYDLPN---KGSYPAF 150 (300)
T ss_dssp EEEECTT-SCEEEEECSS---TTCCEEEEEECSTTCEEEEETT------TTEEEEECTT-SCEEEEECSS---TTCCEEE
T ss_pred EEEECCC-CCeEEecCCC---CCCCCccceECCCCCEEEEccC------CCeEEEECCC-CCEEEccCCC---CCCCcee
Confidence 8899988 7776553211 11122233332 5678876532 3468999987 6665443211 1122334
Q ss_pred EEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEec
Q 006645 353 AAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 353 ~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l 389 (637)
+++..++.||+.... .+.+++||+ +.....+
T Consensus 151 i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~ 181 (300)
T 2qc5_A 151 ITLGSDNALWFTENQ-----NNSIGRITN-TGKLEEY 181 (300)
T ss_dssp EEECTTSSEEEEETT-----TTEEEEECT-TCCEEEE
T ss_pred EEECCCCCEEEEecC-----CCeEEEECC-CCcEEEe
Confidence 455455668876532 135899998 5666654
No 139
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=92.87 E-value=0.21 Score=47.64 Aligned_cols=70 Identities=21% Similarity=0.197 Sum_probs=53.3
Q ss_pred ccCCCChHHHHHHhhhheeeeeCCCCCCC--CCCCCHh------------hhHHHHHHhcCCCCCHHHHHHHHHHHHHHh
Q 006645 36 LTSKFSNDSALLLYALYQQATVGPCNVPK--PSSWSPV------------EQSKWKSWQGLGNMATTEAMRLFVKILEEE 101 (637)
Q Consensus 36 ~~~~~~~~~~l~ly~l~kqa~~g~~~~~~--p~~~~~~------------~~~k~~aw~~~~~~s~~~a~~~yv~~~~~~ 101 (637)
+.-..+.++.++|=||--||..||++... |+.+++. .+.=.+.|++++|||++||+..|++++.++
T Consensus 43 G~~~~~~e~a~~LAal~~Qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~~~~I~~~h~~~~g~s~~eA~~~yL~~~~~l 122 (222)
T 4f7g_A 43 GSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMSEIEAKVRYVKLARSL 122 (222)
T ss_dssp TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCSSCSCGGGTSCGGGGGGCCHHHHHHHHHTTTTCCHHHHHHHHHHHHHTS
T ss_pred CcccCCHHHHHHHHHHHHHHHHCCCCchhcccCccchhhccCHHHHhhhhHHHHHHHHHhccCCCHHHHHHHHHHHHhhc
Confidence 44578999999999999999999998643 3333211 111246799999999999999999999866
Q ss_pred CCCcc
Q 006645 102 DPGWY 106 (637)
Q Consensus 102 ~~~~~ 106 (637)
|.|.
T Consensus 123 -~~yG 126 (222)
T 4f7g_A 123 -KTYG 126 (222)
T ss_dssp -TTTT
T ss_pred -cccC
Confidence 5553
No 140
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=92.83 E-value=2.1 Score=45.33 Aligned_cols=59 Identities=17% Similarity=0.267 Sum_probs=39.7
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcceeE
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQV 274 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v 274 (637)
++++|+|-| +..|+||..+.+.....- +.+| . --++....+++|+|-|. ..
T Consensus 158 ~~~~yfFkG-------~~yw~yd~~~~~~~~~~w-----------~gi~--~-iDAA~~~~g~~YfFkG~--------~y 208 (460)
T 1qhu_A 158 DEGILFFQG-------NRKWFWDLTTGTKKERSW-----------PAVG--N-CTSALRWLGRYYCFQGN--------QF 208 (460)
T ss_dssp SSEEEEEET-------TEEEEEETTTTEEEEECC-----------TTSC--C-CSEEEEETTEEEEEETT--------EE
T ss_pred CCeEEEEec-------ccEEEEecccceeecccC-----------CCCC--c-cchheeeCCceEEEECC--------EE
Confidence 678999988 578999999876553211 1112 2 23555668999999885 46
Q ss_pred EEEECCCC
Q 006645 275 KVFDLQTC 282 (637)
Q Consensus 275 ~~yd~~t~ 282 (637)
+.||..+.
T Consensus 209 ~rfd~~~~ 216 (460)
T 1qhu_A 209 LRFNPVSG 216 (460)
T ss_dssp EEECTTTC
T ss_pred EEEcCccC
Confidence 77876553
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=92.74 E-value=2.2 Score=47.88 Aligned_cols=126 Identities=13% Similarity=0.041 Sum_probs=62.7
Q ss_pred CCEEEEEccc-CCCcccCcEEEEEccCCeEEEeeecccccCC--C-CCCCCCC--CCc------ccceEEEeCCEEEEEE
Q 006645 195 QDKMYIYGGN-HNGRYLSDMHILDLRSWAWSKIQAKAVAEST--E-SPSPALL--TPC------AGHSLIPWENKLLSIA 262 (637)
Q Consensus 195 ~~~lyv~GG~-~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~--~-~~~~~~p--~~r------~~hs~v~~~~~lyv~G 262 (637)
+++.+++++. +++.....++++|+.+++...+.......+. . +...... ..+ ....+..-+++.++++
T Consensus 47 dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~ 126 (741)
T 2ecf_A 47 DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFP 126 (741)
T ss_dssp TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEE
T ss_pred CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEE
Confidence 4555555553 3433345899999999888766543210000 0 0000000 000 1111222255555555
Q ss_pred ccCCCCCcceeEEEEECCCC---ceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEE
Q 006645 263 GHTKDPSEIIQVKVFDLQTC---SWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDE 337 (637)
Q Consensus 263 G~~~~~~~~~~v~~yd~~t~---~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~ 337 (637)
+. ..++++|+.++ .-..+... . .....+.+ +++.++++.. +.|+++|+.+.....
T Consensus 127 ~~-------~~i~~~d~~~~~~~~~~~l~~~-----~-~~~~~~~~SPDG~~la~~~~-------~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 127 LG-------GELYLYDLKQEGKAAVRQLTHG-----E-GFATDAKLSPKGGFVSFIRG-------RNLWVIDLASGRQMQ 186 (741)
T ss_dssp ET-------TEEEEEESSSCSTTSCCBCCCS-----S-SCEEEEEECTTSSEEEEEET-------TEEEEEETTTTEEEE
T ss_pred eC-------CcEEEEECCCCCcceEEEcccC-----C-cccccccCCCCCCEEEEEeC-------CcEEEEecCCCCEEE
Confidence 43 57999999887 44433221 1 11222233 5555555531 369999999988776
Q ss_pred ecC
Q 006645 338 IDA 340 (637)
Q Consensus 338 ~~~ 340 (637)
+..
T Consensus 187 ~~~ 189 (741)
T 2ecf_A 187 LTA 189 (741)
T ss_dssp CCC
T ss_pred ecc
Confidence 643
No 142
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=92.70 E-value=8 Score=39.85 Aligned_cols=136 Identities=14% Similarity=0.140 Sum_probs=71.2
Q ss_pred CcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcceeEEEEECCCCceEeec
Q 006645 211 SDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLK 288 (637)
Q Consensus 211 ~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 288 (637)
+.|+++|..|++...+-... .....-.++.+ ++.+++.|+.++ .|.++|+.+++-....
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~-------------~~~~~V~sv~fspdg~~lasgs~Dg------~v~iWd~~~~~~~~~~ 185 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQME-------------QPGEYISSVAWIKEGNYLAVGTSSA------EVQLWDVQQQKRLRNM 185 (420)
T ss_dssp TEEEEEETTTCCEEEEEECC-------------STTCCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEE
T ss_pred CEEEEEECCCCCEEEEEEec-------------CCCCcEEEEEECCCCCEEEEEECCC------eEEEEEcCCCcEEEEE
Confidence 35777788877665543221 11111233333 567778887754 4889999887644332
Q ss_pred cCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCC
Q 006645 289 TYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGS 368 (637)
Q Consensus 289 ~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~ 368 (637)
. .......+...++.+++.|+.+ ..+..+|..+.........+ ............++..++.|+.+
T Consensus 186 ~-----~h~~~v~~~s~~~~~l~sgs~d------~~i~~~d~~~~~~~~~~~~~---h~~~~~~~~~~~~g~~l~s~~~D 251 (420)
T 4gga_A 186 T-----SHSARVGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLSG---HSQEVCGLRWAPDGRHLASGGND 251 (420)
T ss_dssp C-----CCSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEEC---CSSCEEEEEECTTSSEEEEEETT
T ss_pred e-----CCCCceEEEeeCCCEEEEEeCC------CceeEeeecccceeeEEecc---cccceeeeeecCCCCeeeeeecc
Confidence 2 1122234445567777777753 45777777654433221111 11111223333345566666654
Q ss_pred CCCCcCcEEEEECCCC
Q 006645 369 HAACFNDLHVLDLQTM 384 (637)
Q Consensus 369 ~~~~~~dl~~~d~~t~ 384 (637)
+.+.++|..+.
T Consensus 252 -----~~v~i~~~~~~ 262 (420)
T 4gga_A 252 -----NLVNVWPSAPG 262 (420)
T ss_dssp -----SCEEEEESSCC
T ss_pred -----ccceEEeeccc
Confidence 34677776654
No 143
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=92.64 E-value=9.1 Score=39.42 Aligned_cols=146 Identities=11% Similarity=0.091 Sum_probs=77.5
Q ss_pred CEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCccee
Q 006645 196 DKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEIIQ 273 (637)
Q Consensus 196 ~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~~ 273 (637)
+.+++.||.++ .+.++|..+......-.. ... .-.++.+ ++.+++.||.+..
T Consensus 120 ~~~l~s~s~Dg-----~i~vwd~~~~~~~~~l~~-------------h~~--~V~~v~~~~~~~~l~sgs~D~~------ 173 (410)
T 1vyh_C 120 FSVMVSASEDA-----TIKVWDYETGDFERTLKG-------------HTD--SVQDISFDHSGKLLASCSADMT------ 173 (410)
T ss_dssp SSEEEEEESSS-----CEEEEETTTCCCCEEECC-------------CSS--CEEEEEECTTSSEEEEEETTSC------
T ss_pred CCEEEEEeCCC-----eEEEEECCCCcEEEEEec-------------cCC--cEEEEEEcCCCCEEEEEeCCCe------
Confidence 45677776433 588899888654322110 111 1122223 5677788887543
Q ss_pred EEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCccccc
Q 006645 274 VKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDH 351 (637)
Q Consensus 274 v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h 351 (637)
+.+||+.+..-... +........++.+ ++..++.|+.+ ..+.+||+.+..-...-.. ....-.
T Consensus 174 i~iwd~~~~~~~~~-----~~~h~~~V~~v~~~p~~~~l~s~s~D------~~i~~wd~~~~~~~~~~~~----h~~~v~ 238 (410)
T 1vyh_C 174 IKLWDFQGFECIRT-----MHGHDHNVSSVSIMPNGDHIVSASRD------KTIKMWEVQTGYCVKTFTG----HREWVR 238 (410)
T ss_dssp CCEEETTSSCEEEC-----CCCCSSCEEEEEECSSSSEEEEEETT------SEEEEEETTTCCEEEEEEC----CSSCEE
T ss_pred EEEEeCCCCceeEE-----EcCCCCCEEEEEEeCCCCEEEEEeCC------CeEEEEECCCCcEEEEEeC----CCccEE
Confidence 66788876543222 1111222233333 45667777753 4588999987754322110 111112
Q ss_pred EEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 352 AAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 352 ~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
++....++.+++.|+.+ ..+.+||+.+....
T Consensus 239 ~~~~~~~g~~l~s~s~D-----~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 239 MVRPNQDGTLIASCSND-----QTVRVWVVATKECK 269 (410)
T ss_dssp EEEECTTSSEEEEEETT-----SCEEEEETTTCCEE
T ss_pred EEEECCCCCEEEEEcCC-----CeEEEEECCCCcee
Confidence 23333456677777754 35788888776554
No 144
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=92.57 E-value=8.4 Score=43.10 Aligned_cols=170 Identities=11% Similarity=0.072 Sum_probs=87.2
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCC-----
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKD----- 267 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~----- 267 (637)
+++.++|+...++.....++++|+.+++........ .. ...+.+ +++.++++.....
T Consensus 135 Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~--------------~~--~~~~~wspDg~~l~~~~~~~~~~~~~ 198 (710)
T 2xdw_A 135 DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER--------------VK--FSCMAWTHDGKGMFYNAYPQQDGKSD 198 (710)
T ss_dssp TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE--------------EC--SCCEEECTTSSEEEEEECCCCSSCCS
T ss_pred CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC--------------cc--cceEEEEeCCCEEEEEEECCcccccc
Confidence 455555544333333347999999999887653221 11 122223 4544444433221
Q ss_pred -----CCcceeEEEEECCCCceE--eeccCCCCCCCCCceEEEEE-CCEEEEEeCCCCCCCCCCceEEEECCC------C
Q 006645 268 -----PSEIIQVKVFDLQTCSWS--TLKTYGKPPVSRGGQSVTLV-GTSLVIFGGEDAKRSLLNDLHILDLET------M 333 (637)
Q Consensus 268 -----~~~~~~v~~yd~~t~~W~--~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~n~i~~yd~~t------~ 333 (637)
......|+++++.+.... .+.. + ...+......... +++.++++...... ..+.++++|+.+ .
T Consensus 199 ~~~~~~~~~~~v~~~~l~t~~~~~~~v~~-~-~~~~~~~~~~~~SpDg~~l~~~~~~~~~-~~~~l~~~d~~~~~~~~~~ 275 (710)
T 2xdw_A 199 GTETSTNLHQKLYYHVLGTDQSEDILCAE-F-PDEPKWMGGAELSDDGRYVLLSIREGCD-PVNRLWYCDLQQESNGITG 275 (710)
T ss_dssp SSCCCCCCCCEEEEEETTSCGGGCEEEEC-C-TTCTTCEEEEEECTTSCEEEEEEECSSS-SCCEEEEEEGGGSSSSSCS
T ss_pred ccccccCCCCEEEEEECCCCcccceEEec-c-CCCCeEEEEEEEcCCCCEEEEEEEccCC-CccEEEEEECcccccccCC
Confidence 122456899999887643 2211 1 1112222222222 44433443322211 257899999876 4
Q ss_pred --ceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCC---eeEecc
Q 006645 334 --TWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTM---EWSRPT 390 (637)
Q Consensus 334 --~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~---~W~~l~ 390 (637)
.+..+... .. .........++.||+.+..+. ....|+++|+.+. .|..+.
T Consensus 276 ~~~~~~l~~~----~~-~~~~~~s~dg~~l~~~s~~~~--~~~~l~~~d~~~~~~~~~~~l~ 330 (710)
T 2xdw_A 276 ILKWVKLIDN----FE-GEYDYVTNEGTVFTFKTNRHS--PNYRLINIDFTDPEESKWKVLV 330 (710)
T ss_dssp SCCCEEEECS----SS-SCEEEEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEE
T ss_pred ccceEEeeCC----CC-cEEEEEeccCCEEEEEECCCC--CCCEEEEEeCCCCCcccceecc
Confidence 68777532 11 112223334677888765432 2357999998875 588764
No 145
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=92.56 E-value=2.4 Score=35.17 Aligned_cols=27 Identities=15% Similarity=0.108 Sum_probs=12.1
Q ss_pred HhHHHHHHHHhhhhhHHHHHHHHHHHH
Q 006645 517 ATLKAEKEELESSLSKEKLQSIQLKQD 543 (637)
Q Consensus 517 ~~l~~~~~~le~~~~e~~~~~~~l~~~ 543 (637)
..|+.+..++++++.....+...|...
T Consensus 9 ~~lq~~~~ql~~qL~k~~~~r~~Le~~ 35 (112)
T 1x79_B 9 KKLQLMLRQANDQLEKTMKDKQELEDF 35 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444445555444444444444433
No 146
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=92.53 E-value=4 Score=41.44 Aligned_cols=107 Identities=10% Similarity=0.024 Sum_probs=56.9
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE-CCEEEEEeCCCCCCCCCCceEEEECCCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GTSLVIFGGEDAKRSLLNDLHILDLETM 333 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~n~i~~yd~~t~ 333 (637)
.+..+++|+.+ ..+.+||+.+..-...-. .....-.+++.. ++.+++.|+.+ ..+.+||+.+.
T Consensus 216 ~~~~~~~~~~~------g~i~~~d~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~ 279 (425)
T 1r5m_A 216 DDDKFVIPGPK------GAIFVYQITEKTPTGKLI----GHHGPISVLEFNDTNKLLLSASDD------GTLRIWHGGNG 279 (425)
T ss_dssp ETTEEEEECGG------GCEEEEETTCSSCSEEEC----CCSSCEEEEEEETTTTEEEEEETT------SCEEEECSSSB
T ss_pred CCCEEEEEcCC------CeEEEEEcCCCceeeeec----cCCCceEEEEECCCCCEEEEEcCC------CEEEEEECCCC
Confidence 34446666654 358899988764332211 011111222222 45566777643 35888988765
Q ss_pred ceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 334 TWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 334 ~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
.....-. .....-.+++...++ +++.|+.+ ..+.+||+.+..-.
T Consensus 280 ~~~~~~~----~~~~~i~~~~~~~~~-~l~~~~~d-----~~i~i~d~~~~~~~ 323 (425)
T 1r5m_A 280 NSQNCFY----GHSQSIVSASWVGDD-KVISCSMD-----GSVRLWSLKQNTLL 323 (425)
T ss_dssp SCSEEEC----CCSSCEEEEEEETTT-EEEEEETT-----SEEEEEETTTTEEE
T ss_pred ccceEec----CCCccEEEEEECCCC-EEEEEeCC-----CcEEEEECCCCcEe
Confidence 4322211 111223345555566 66666653 36899999876543
No 147
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=92.47 E-value=10 Score=38.54 Aligned_cols=106 Identities=8% Similarity=0.019 Sum_probs=60.4
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLET 332 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t 332 (637)
++.+++.|+.++ .+.+||+.+..-...- ........++.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 108 ~~~~l~~~~~dg------~i~iwd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~s~s~d------~~i~iwd~~~ 170 (420)
T 3vl1_A 108 QMRRFILGTTEG------DIKVLDSNFNLQREID-----QAHVSEITKLKFFPSGEALISSSQD------MQLKIWSVKD 170 (420)
T ss_dssp SSCEEEEEETTS------CEEEECTTSCEEEEET-----TSSSSCEEEEEECTTSSEEEEEETT------SEEEEEETTT
T ss_pred CCCEEEEEECCC------CEEEEeCCCcceeeec-----ccccCccEEEEECCCCCEEEEEeCC------CeEEEEeCCC
Confidence 677888887654 4889998876654431 111222233333 45677777653 4589999876
Q ss_pred CceE-EecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 333 MTWD-EIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 333 ~~W~-~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
.+-. .+.. ....-.+++...++.+++.|+.+ ..+.+||+.+..-.
T Consensus 171 ~~~~~~~~~-----h~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~ 216 (420)
T 3vl1_A 171 GSNPRTLIG-----HRATVTDIAIIDRGRNVLSASLD-----GTIRLWECGTGTTI 216 (420)
T ss_dssp CCCCEEEEC-----CSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTTEEE
T ss_pred CcCceEEcC-----CCCcEEEEEEcCCCCEEEEEcCC-----CcEEEeECCCCcee
Confidence 5422 2211 11122334444455567777754 34888998876543
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=92.47 E-value=9 Score=42.54 Aligned_cols=114 Identities=11% Similarity=-0.008 Sum_probs=60.3
Q ss_pred cceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCC-ceEEecCCCCCCC
Q 006645 270 EIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETM-TWDEIDAVGVPPS 346 (637)
Q Consensus 270 ~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~-~W~~~~~~~~~p~ 346 (637)
....++++|+.++.-..+.. ..........+.+ +++.++++..+... ....++++|+.+. .+..+........
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~---~~~~~~~~~~~~~spdg~~l~~~~~~~~~-~~~~v~~~d~~~g~~~~~~~~~~~~~~ 308 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQT---GEPKEKFLTNLSWSPDENILYVAEVNRAQ-NECKVNAYDAETGRFVRTLFVETDKHY 308 (706)
T ss_dssp CEEEEEEEETTTTEEEECCC---CSCTTCEEEEEEECTTSSEEEEEEECTTS-CEEEEEEEETTTCCEEEEEEEEECSSC
T ss_pred CeeEEEEEECCCCceEeecc---CCCCceeEeeEEEECCCCEEEEEEeCCCC-CeeEEEEEECCCCceeeEEEEccCCCe
Confidence 34679999999887655532 1111122223333 45544444433221 2457999999988 6666532110000
Q ss_pred cccccEEEEEc--CCEEEEEeCCCCCCCcCcEEEEECCCCeeEecc
Q 006645 347 PRSDHAAAVHA--ERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPT 390 (637)
Q Consensus 347 ~r~~h~~~~~~--~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~ 390 (637)
......++... ++.+++.+..++ ...+|.+|........+.
T Consensus 309 ~~~~~~~~~sp~~dg~~l~~~~~~g---~~~l~~~~~~~~~~~~l~ 351 (706)
T 2z3z_A 309 VEPLHPLTFLPGSNNQFIWQSRRDG---WNHLYLYDTTGRLIRQVT 351 (706)
T ss_dssp CCCCSCCEECTTCSSEEEEEECTTS---SCEEEEEETTSCEEEECC
T ss_pred ECccCCceeecCCCCEEEEEEccCC---ccEEEEEECCCCEEEecC
Confidence 00012334444 666666654432 356888887777776653
No 149
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=92.41 E-value=3.3 Score=41.90 Aligned_cols=152 Identities=12% Similarity=0.144 Sum_probs=77.0
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~ 272 (637)
++.+++.|+.+ ..+.+||+.+..-...-.. +........... ++.+++.|+.++
T Consensus 111 ~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~------ 166 (408)
T 4a11_B 111 DTGMFTSSSFD-----KTLKVWDTNTLQTADVFNF-------------EETVYSHHMSPVSTKHCLVAVGTRGP------ 166 (408)
T ss_dssp CTTCEEEEETT-----SEEEEEETTTTEEEEEEEC-------------SSCEEEEEECSSCSSCCEEEEEESSS------
T ss_pred CCcEEEEEeCC-----CeEEEeeCCCCccceeccC-------------CCceeeeEeecCCCCCcEEEEEcCCC------
Confidence 44567776632 3588999988765544321 111111111111 345777777643
Q ss_pred eEEEEECCCCceEeeccCCCCCCCCCceEEEEE--C-CEEEEEeCCCCCCCCCCceEEEECCCCc--eEEecCCC-----
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--G-TSLVIFGGEDAKRSLLNDLHILDLETMT--WDEIDAVG----- 342 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~-~~lyv~GG~~~~~~~~n~i~~yd~~t~~--W~~~~~~~----- 342 (637)
.+.+||+.+..-...-. .......+..+ + ..+++.|+.+ ..+.+||+.+.. ...+....
T Consensus 167 ~v~~~d~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~ll~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~ 235 (408)
T 4a11_B 167 KVQLCDLKSGSCSHILQ-----GHRQEILAVSWSPRYDYILATASAD------SRVKLWDVRRASGCLITLDQHNGKKSQ 235 (408)
T ss_dssp SEEEEESSSSCCCEEEC-----CCCSCEEEEEECSSCTTEEEEEETT------SCEEEEETTCSSCCSEECCTTTTCSCC
T ss_pred eEEEEeCCCcceeeeec-----CCCCcEEEEEECCCCCcEEEEEcCC------CcEEEEECCCCCcccccccccccccce
Confidence 48899988765333211 11122233333 2 3377788753 358889887643 22221100
Q ss_pred C-----CCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCee
Q 006645 343 V-----PPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEW 386 (637)
Q Consensus 343 ~-----~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W 386 (637)
. ......-.+++...++..++.|+.+ ..+.+||+.+..-
T Consensus 236 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~ 279 (408)
T 4a11_B 236 AVESANTAHNGKVNGLCFTSDGLHLLTVGTD-----NRMRLWNSSNGEN 279 (408)
T ss_dssp CTTTSSCSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCB
T ss_pred eeccccccccCceeEEEEcCCCCEEEEecCC-----CeEEEEECCCCcc
Confidence 0 0111112233444455566777654 3588999887653
No 150
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=92.37 E-value=3.9 Score=40.56 Aligned_cols=151 Identities=8% Similarity=0.010 Sum_probs=74.1
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~ 272 (637)
++.+++.|+.+ ..+.+||+.+.+-...-. .......++.+ ++.+++.|+.++
T Consensus 43 ~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~---------------~h~~~v~~~~~~~~~~~l~s~~~dg------ 96 (369)
T 3zwl_B 43 EGDLLFSCSKD-----SSASVWYSLNGERLGTLD---------------GHTGTIWSIDVDCFTKYCVTGSADY------ 96 (369)
T ss_dssp TSCEEEEEESS-----SCEEEEETTTCCEEEEEC---------------CCSSCEEEEEECTTSSEEEEEETTT------
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCchhhhhhh---------------hcCCcEEEEEEcCCCCEEEEEeCCC------
Confidence 45566666633 358889988765433211 11111222333 466667776643
Q ss_pred eEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCc----eEEecCCC----
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMT----WDEIDAVG---- 342 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~----W~~~~~~~---- 342 (637)
.+.+||+.+..-...-.. + . ...++.+ ++..++.++.+... ....+.+||+.+.. +.......
T Consensus 97 ~i~iwd~~~~~~~~~~~~---~--~-~v~~~~~~~~~~~l~~~~~~~~~-~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~ 169 (369)
T 3zwl_B 97 SIKLWDVSNGQCVATWKS---P--V-PVKRVEFSPCGNYFLAILDNVMK-NPGSINIYEIERDSATHELTKVSEEPIHKI 169 (369)
T ss_dssp EEEEEETTTCCEEEEEEC---S--S-CEEEEEECTTSSEEEEEECCBTT-BCCEEEEEEEEECTTTCCEEEECSSCSEEE
T ss_pred eEEEEECCCCcEEEEeec---C--C-CeEEEEEccCCCEEEEecCCccC-CCCEEEEEEecCCccceeecccccceeeec
Confidence 588999988765444321 1 1 1122222 44555555543111 13567888765432 22211100
Q ss_pred -CCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCC
Q 006645 343 -VPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQT 383 (637)
Q Consensus 343 -~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t 383 (637)
.........+++...++.++++|+.+ ..+.+||+.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~ 206 (369)
T 3zwl_B 170 ITHEGLDAATVAGWSTKGKYIIAGHKD-----GKISKYDVSN 206 (369)
T ss_dssp ECCTTCCCEEEEEECGGGCEEEEEETT-----SEEEEEETTT
T ss_pred cCCcCccceeEEEEcCCCCEEEEEcCC-----CEEEEEECCC
Confidence 00000022233343455567777653 3589999987
No 151
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=92.37 E-value=1.3 Score=57.80 Aligned_cols=13 Identities=15% Similarity=0.406 Sum_probs=8.8
Q ss_pred EEEEccCCeEEEe
Q 006645 214 HILDLRSWAWSKI 226 (637)
Q Consensus 214 ~~yd~~t~~W~~~ 226 (637)
..||+....|..+
T Consensus 1408 g~yd~~~~~~~~i 1420 (3245)
T 3vkg_A 1408 GFWRTSDHTWIKL 1420 (3245)
T ss_dssp EEEETTTTEEEEE
T ss_pred CeEECCCCeEEEe
Confidence 4577777777655
No 152
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=92.22 E-value=4.7 Score=41.31 Aligned_cols=147 Identities=16% Similarity=0.146 Sum_probs=75.7
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~ 272 (637)
++.+++.|+.+ ..+.++|+.+.+-...-.. ... ...++.+ ++..++.|+.+.
T Consensus 134 dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~--------------h~~-~v~~~~~~p~~~~l~s~s~d~------ 187 (393)
T 1erj_A 134 DGKFLATGAED-----RLIRIWDIENRKIVMILQG--------------HEQ-DIYSLDYFPSGDKLVSGSGDR------ 187 (393)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTTEEEEEECC--------------CSS-CEEEEEECTTSSEEEEEETTS------
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcEEEEEcc--------------CCC-CEEEEEEcCCCCEEEEecCCC------
Confidence 46677777643 3588999988764332110 111 1122222 455566666543
Q ss_pred eEEEEECCCCceEeeccCCCCCCCCCceEEEEE---CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCC-C--CC
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV---GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGV-P--PS 346 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~-~--p~ 346 (637)
.+.+||+.++.....-.. .....++.+ ++.+++.|+.+ ..+.+||+.+..-...-.... . ..
T Consensus 188 ~v~iwd~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~s~d------~~v~iwd~~~~~~~~~~~~~~~~~~~h 255 (393)
T 1erj_A 188 TVRIWDLRTGQCSLTLSI------EDGVTTVAVSPGDGKYIAAGSLD------RAVRVWDSETGFLVERLDSENESGTGH 255 (393)
T ss_dssp EEEEEETTTTEEEEEEEC------SSCEEEEEECSTTCCEEEEEETT------SCEEEEETTTCCEEEEEC------CCC
T ss_pred cEEEEECCCCeeEEEEEc------CCCcEEEEEECCCCCEEEEEcCC------CcEEEEECCCCcEEEeecccccCCCCC
Confidence 588899988765443221 112222333 46778888764 358899988765433211100 0 01
Q ss_pred cccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCC
Q 006645 347 PRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTM 384 (637)
Q Consensus 347 ~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~ 384 (637)
...-.+++...++.+++.|+.+ ..+.+||+.+.
T Consensus 256 ~~~v~~v~~~~~g~~l~s~s~d-----~~v~~wd~~~~ 288 (393)
T 1erj_A 256 KDSVYSVVFTRDGQSVVSGSLD-----RSVKLWNLQNA 288 (393)
T ss_dssp SSCEEEEEECTTSSEEEEEETT-----SEEEEEEC---
T ss_pred CCCEEEEEECCCCCEEEEEeCC-----CEEEEEECCCC
Confidence 1111233444456677777754 35788887653
No 153
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.19 E-value=3.8 Score=46.35 Aligned_cols=147 Identities=10% Similarity=0.015 Sum_probs=76.4
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~ 272 (637)
++..+++||.+ ..+.+||..+++....-.. ... ...++.+ ++..++.|+.++
T Consensus 66 ~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~-------------~~~--~v~~~~~s~~~~~l~~~~~dg------ 119 (814)
T 3mkq_A 66 RKNWIIVGSDD-----FRIRVFNYNTGEKVVDFEA-------------HPD--YIRSIAVHPTKPYVLSGSDDL------ 119 (814)
T ss_dssp GGTEEEEEETT-----SEEEEEETTTCCEEEEEEC-------------CSS--CEEEEEECSSSSEEEEEETTS------
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEEec-------------CCC--CEEEEEEeCCCCEEEEEcCCC------
Confidence 45566667642 4689999988776443221 111 1122222 455566666533
Q ss_pred eEEEEECCCC-ceEeeccCCCCCCCCCceEEEE-E--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcc
Q 006645 273 QVKVFDLQTC-SWSTLKTYGKPPVSRGGQSVTL-V--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPR 348 (637)
Q Consensus 273 ~v~~yd~~t~-~W~~~~~~g~~p~~r~~~~~~~-~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r 348 (637)
.+.+||+.++ .....-. .......++. . ++.++++|+.+ ..+.+||+.+..-...... ....
T Consensus 120 ~i~vw~~~~~~~~~~~~~-----~~~~~v~~~~~~p~~~~~l~~~~~d------g~v~vwd~~~~~~~~~~~~---~~~~ 185 (814)
T 3mkq_A 120 TVKLWNWENNWALEQTFE-----GHEHFVMCVAFNPKDPSTFASGCLD------RTVKVWSLGQSTPNFTLTT---GQER 185 (814)
T ss_dssp EEEEEEGGGTSEEEEEEE-----CCSSCEEEEEEETTEEEEEEEEETT------SEEEEEETTCSSCSEEEEC---CCTT
T ss_pred EEEEEECCCCceEEEEEc-----CCCCcEEEEEEEcCCCCEEEEEeCC------CeEEEEECCCCcceeEEec---CCCC
Confidence 5888888765 3322211 1111122222 3 35677777753 4588999866543222111 1112
Q ss_pred cccEEEEEc--CCEEEEEeCCCCCCCcCcEEEEECCCCee
Q 006645 349 SDHAAAVHA--ERYLLIFGGGSHAACFNDLHVLDLQTMEW 386 (637)
Q Consensus 349 ~~h~~~~~~--~~~l~v~GG~~~~~~~~dl~~~d~~t~~W 386 (637)
...+++... ++.++++|+.+ ..+.+||+.+..-
T Consensus 186 ~v~~~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~ 220 (814)
T 3mkq_A 186 GVNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSC 220 (814)
T ss_dssp CCCEEEECCSTTCCEEEEECTT-----SEEEEEETTTTEE
T ss_pred CEEEEEEEECCCCCEEEEEeCC-----CEEEEEECCCCcE
Confidence 223334433 55577777754 3588999877653
No 154
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=92.12 E-value=4.3 Score=33.39 Aligned_cols=36 Identities=31% Similarity=0.417 Sum_probs=21.3
Q ss_pred HhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 006645 569 QSRCFKLEVDVAELRQKLQTMETLQKELELLQRQKAASE 607 (637)
Q Consensus 569 q~~~~~le~~~~el~~~lq~~q~~~~e~~~~~~~~~~~~ 607 (637)
+.+..+|+.|+..|.|+||. ...|++.|+++...+.
T Consensus 70 q~~vqeLqgEI~~Lnq~Lq~---a~ae~erlr~~~~~~~ 105 (121)
T 3mq7_A 70 QKKVEELEGEITTLNHKLQD---ASAEVERLRRENQVLS 105 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHhhchhhh
Confidence 44566777777777766554 4455555655544433
No 155
>2oto_A M protein; helical coiled coil, fibrinogen-binding, virulence factor, S active protein, toxin; 3.04A {Streptococcus pyogenes serotype M1} PDB: 2xny_M
Probab=92.03 E-value=4.8 Score=35.75 Aligned_cols=47 Identities=21% Similarity=0.255 Sum_probs=22.5
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 006645 519 LKAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQL 565 (637)
Q Consensus 519 l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql 565 (637)
|+.+.+.+...+.........|+.++.+++...+++++++.+++.+.
T Consensus 34 Lk~e~e~l~~~~~~~~~~~~eL~~~~~~Le~~n~~L~~~lke~~~~~ 80 (155)
T 2oto_A 34 LKARLENAMEVAGRDFKRAEELEKAKQALEDQRKDLETKLKELQQDY 80 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444433333333334455555555555555555555555444
No 156
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=92.02 E-value=0.67 Score=49.84 Aligned_cols=8 Identities=38% Similarity=0.430 Sum_probs=3.0
Q ss_pred EEEEccCC
Q 006645 214 HILDLRSW 221 (637)
Q Consensus 214 ~~yd~~t~ 221 (637)
..+|+..+
T Consensus 83 ~~L~Ls~N 90 (487)
T 3oja_A 83 RTLDLNNN 90 (487)
T ss_dssp CEEECCSS
T ss_pred CEEEecCC
Confidence 33333333
No 157
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=91.98 E-value=8.6 Score=42.98 Aligned_cols=83 Identities=14% Similarity=0.167 Sum_probs=48.8
Q ss_pred eeEEEECCEEEEEcccCCCcccCcEEEEEccCCe--EEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCC
Q 006645 189 HGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSWA--WSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTK 266 (637)
Q Consensus 189 ~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~ 266 (637)
.+.++.++.||+... ...++.+|..|++ |+.-.... . ........+-+..++.||+..+...
T Consensus 122 ~~~a~~~~~v~v~~~------dg~l~alD~~tG~~~W~~~~~~~---------~-~~~~~~~~~p~v~~~~v~v~~~~~~ 185 (677)
T 1kb0_A 122 RGVALWKGKVYVGAW------DGRLIALDAATGKEVWHQNTFEG---------Q-KGSLTITGAPRVFKGKVIIGNGGAE 185 (677)
T ss_dssp CCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEETTTT---------C-CSSCBCCSCCEEETTEEEECCBCTT
T ss_pred CCceEECCEEEEEcC------CCEEEEEECCCCCEEeeecCCcC---------c-CcCcccccCcEEECCEEEEEecccc
Confidence 355667899998753 2469999998864 77542100 0 0001122233456788877544221
Q ss_pred CCCcceeEEEEECCCCc--eEeec
Q 006645 267 DPSEIIQVKVFDLQTCS--WSTLK 288 (637)
Q Consensus 267 ~~~~~~~v~~yd~~t~~--W~~~~ 288 (637)
......++.||..|++ |+.-.
T Consensus 186 -~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 186 -YGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp -TCCBCEEEEEETTTCCEEEEEES
T ss_pred -cCCCCEEEEEECCCCcEEEEecc
Confidence 1234679999998875 87654
No 158
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=91.91 E-value=4.5 Score=34.17 Aligned_cols=49 Identities=22% Similarity=0.229 Sum_probs=27.3
Q ss_pred HHhhhhhhHHHHHHHHHHHHh----HHHHHHHHHHHHHHHHH----HHHHHHHHhhc
Q 006645 568 EQSRCFKLEVDVAELRQKLQT----METLQKELELLQRQKAA----SEQAALNAKRQ 616 (637)
Q Consensus 568 ~q~~~~~le~~~~el~~~lq~----~q~~~~e~~~~~~~~~~----~~~~~~~~~r~ 616 (637)
+......+|.++..|++.++. .-+|+.+++-|++++.- .++++.+.+.|
T Consensus 60 E~~~r~~~E~di~~lrK~lD~~~l~r~dLE~~iesL~eEl~FLKk~heeEl~eLq~q 116 (119)
T 3ol1_A 60 EMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQELQAQ 116 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344556666666666665 22566677666666433 34555555544
No 159
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=91.90 E-value=8.2 Score=36.57 Aligned_cols=149 Identities=10% Similarity=0.002 Sum_probs=76.5
Q ss_pred CCEEEE-EcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe-CCEEEEEEccCCCCCcce
Q 006645 195 QDKMYI-YGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW-ENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv-~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~-~~~lyv~GG~~~~~~~~~ 272 (637)
++.||+ ..+. .+.+.+||+.+......... ....-++++.. ++.||+... . .
T Consensus 34 ~g~l~v~~~~~-----~~~i~~~~~~~~~~~~~~~~--------------~~~~p~~i~~~~~g~l~v~~~-~------~ 87 (270)
T 1rwi_B 34 AGNVYVTSEGM-----YGRVVKLATGSTGTTVLPFN--------------GLYQPQGLAVDGAGTVYVTDF-N------N 87 (270)
T ss_dssp TCCEEEEECSS-----SCEEEEECC-----EECCCC--------------SCCSCCCEEECTTCCEEEEET-T------T
T ss_pred CCCEEEEccCC-----CCcEEEecCCCcccceEeeC--------------CcCCcceeEECCCCCEEEEcC-C------C
Confidence 467888 5331 24688888877654433211 00111223333 567888764 1 2
Q ss_pred eEEEEECCCCceEeeccCCCCCCCCCceEEEEE-CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCccccc
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDH 351 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h 351 (637)
.+.+||+.+.........+ . ..-+.++.. +++||+.... .+.|++|+..+......... ....-.
T Consensus 88 ~i~~~d~~~~~~~~~~~~~-~---~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~~----~~~~p~ 153 (270)
T 1rwi_B 88 RVVTLAAGSNNQTVLPFDG-L---NYPEGLAVDTQGAVYVADRG------NNRVVKLAAGSKTQTVLPFT----GLNDPD 153 (270)
T ss_dssp EEEEECTTCSCCEECCCCS-C---SSEEEEEECTTCCEEEEEGG------GTEEEEECTTCCSCEECCCC----SCCSCC
T ss_pred EEEEEeCCCceEeeeecCC-c---CCCcceEECCCCCEEEEECC------CCEEEEEECCCceeEeeccc----cCCCce
Confidence 6889998876654442211 1 111233332 5678886542 34688888766655443211 111223
Q ss_pred EEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEe
Q 006645 352 AAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSR 388 (637)
Q Consensus 352 ~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~ 388 (637)
++++..++.||+.... .+.|.+||+.+..-..
T Consensus 154 ~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~ 185 (270)
T 1rwi_B 154 GVAVDNSGNVYVTDTD-----NNRVVKLEAESNNQVV 185 (270)
T ss_dssp CEEECTTCCEEEEEGG-----GTEEEEECTTTCCEEE
T ss_pred eEEEeCCCCEEEEECC-----CCEEEEEecCCCceEe
Confidence 4555555668887542 2468999988765433
No 160
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=91.86 E-value=3.2 Score=42.06 Aligned_cols=157 Identities=14% Similarity=0.174 Sum_probs=76.3
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe---CCEEEEEEccCCCCCcc
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW---ENKLLSIAGHTKDPSEI 271 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~---~~~lyv~GG~~~~~~~~ 271 (637)
++.+++.||.+ ..+.+||+.+................. ...........++.+ ++.+++.|+.++
T Consensus 55 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~----- 122 (408)
T 4a11_B 55 EGRYMLSGGSD-----GVIVLYDLENSSRQSYYTCKAVCSIGR--DHPDVHRYSVETVQWYPHDTGMFTSSSFDK----- 122 (408)
T ss_dssp TCCEEEEEETT-----SCEEEEECCCCSSSSCEEECEEEEECT--TCTTCCSSCEEEEEECTTCTTCEEEEETTS-----
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcccceEeccccccccc--cccccCCCcEEEEEEccCCCcEEEEEeCCC-----
Confidence 46677777743 358888988754322211000000000 000011112223333 445777777543
Q ss_pred eeEEEEECCCCceEeeccCCCCCCCCCceEEEEE----CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCc
Q 006645 272 IQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV----GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSP 347 (637)
Q Consensus 272 ~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~ 347 (637)
.+.+||+.+..-..... .+.+. .++... ++.+++.|+.+ ..+.+||+.+..-...-.. ..
T Consensus 123 -~i~iwd~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~------~~v~~~d~~~~~~~~~~~~----~~ 186 (408)
T 4a11_B 123 -TLKVWDTNTLQTADVFN---FEETV--YSHHMSPVSTKHCLVAVGTRG------PKVQLCDLKSGSCSHILQG----HR 186 (408)
T ss_dssp -EEEEEETTTTEEEEEEE---CSSCE--EEEEECSSCSSCCEEEEEESS------SSEEEEESSSSCCCEEECC----CC
T ss_pred -eEEEeeCCCCccceecc---CCCce--eeeEeecCCCCCcEEEEEcCC------CeEEEEeCCCcceeeeecC----CC
Confidence 58899998877555432 11111 112221 33477777653 4689999877643222110 11
Q ss_pred ccccEEEEEcC-CEEEEEeCCCCCCCcCcEEEEECCCC
Q 006645 348 RSDHAAAVHAE-RYLLIFGGGSHAACFNDLHVLDLQTM 384 (637)
Q Consensus 348 r~~h~~~~~~~-~~l~v~GG~~~~~~~~dl~~~d~~t~ 384 (637)
..-.+++...+ .++++.|+.+ ..+.+||+.+.
T Consensus 187 ~~v~~~~~~~~~~~ll~~~~~d-----g~i~i~d~~~~ 219 (408)
T 4a11_B 187 QEILAVSWSPRYDYILATASAD-----SRVKLWDVRRA 219 (408)
T ss_dssp SCEEEEEECSSCTTEEEEEETT-----SCEEEEETTCS
T ss_pred CcEEEEEECCCCCcEEEEEcCC-----CcEEEEECCCC
Confidence 11223333333 3377777754 34788888654
No 161
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=91.80 E-value=8 Score=37.63 Aligned_cols=167 Identities=10% Similarity=0.015 Sum_probs=83.3
Q ss_pred eEEecccCCCCCCCCcceeEEEECCEEEEEcccCCCcccCcEEEEEccCC--eEEEeeecccccCCCCCCCCCCCCcccc
Q 006645 172 QWIAPPISGQRPKARYEHGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSW--AWSKIQAKAVAESTESPSPALLTPCAGH 249 (637)
Q Consensus 172 ~W~~~~~~g~~p~~R~~~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~~~~~~~~~~~p~~r~~h 249 (637)
.|+.....+ ....+..+..+++||+.+. +.++.||+ ++ .|+.-.. ....-+
T Consensus 28 ~w~~~~~~~----~~~~~~~~~pdG~ilvs~~-------~~V~~~d~-~G~~~W~~~~~---------------~~~~~~ 80 (276)
T 3no2_A 28 VWEYPLEKG----WECNSVAATKAGEILFSYS-------KGAKMITR-DGRELWNIAAP---------------AGCEMQ 80 (276)
T ss_dssp EEEEECCTT----CCCCEEEECTTSCEEEECB-------SEEEEECT-TSCEEEEEECC---------------TTCEEE
T ss_pred EEEeCCCcc----CCCcCeEECCCCCEEEeCC-------CCEEEECC-CCCEEEEEcCC---------------CCcccc
Confidence 577654210 1233334444778888432 45899999 54 4654311 111223
Q ss_pred eEEEe-CCEEEEEEccCCCCCcceeEEEEECCCC-ceEeeccCC-CCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceE
Q 006645 250 SLIPW-ENKLLSIAGHTKDPSEIIQVKVFDLQTC-SWSTLKTYG-KPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLH 326 (637)
Q Consensus 250 s~v~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~-~W~~~~~~g-~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~ 326 (637)
++... ++.+++..+.. ...++.||+... .|......+ ..+...........++.+++.... .+.+.
T Consensus 81 ~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~------~~~v~ 149 (276)
T 3no2_A 81 TARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA------TSEVR 149 (276)
T ss_dssp EEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT------TTEEE
T ss_pred ccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC------CCEEE
Confidence 33333 56666554321 236788887443 244332211 011111112223335555555432 35689
Q ss_pred EEECCCC-ceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCe--eEe
Q 006645 327 ILDLETM-TWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTME--WSR 388 (637)
Q Consensus 327 ~yd~~t~-~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~--W~~ 388 (637)
+||+.-. .|+.-.. ...+++....++.++|++..+ +.+..||+.+++ |+.
T Consensus 150 ~~d~~G~~~w~~~~~-------~~~~~~~~~~~g~~~v~~~~~-----~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 150 EIAPNGQLLNSVKLS-------GTPFSSAFLDNGDCLVACGDA-----HCFVQLNLESNRIVRRV 202 (276)
T ss_dssp EECTTSCEEEEEECS-------SCCCEEEECTTSCEEEECBTT-----SEEEEECTTTCCEEEEE
T ss_pred EECCCCCEEEEEECC-------CCccceeEcCCCCEEEEeCCC-----CeEEEEeCcCCcEEEEe
Confidence 9998732 3654321 112345555566677776542 358999998554 654
No 162
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=91.80 E-value=3.8 Score=46.33 Aligned_cols=147 Identities=9% Similarity=0.022 Sum_probs=76.9
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcceeE
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQV 274 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v 274 (637)
++.++++|+.+ +.+.+||..++.....-.. ...........-++..+++||.+ ..+
T Consensus 24 ~~~~la~~~~~-----g~v~iwd~~~~~~~~~~~~-------------~~~~v~~~~~s~~~~~l~~~~~d------g~i 79 (814)
T 3mkq_A 24 TEPWVLTTLYS-----GRVEIWNYETQVEVRSIQV-------------TETPVRAGKFIARKNWIIVGSDD------FRI 79 (814)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEEC-------------CSSCEEEEEEEGGGTEEEEEETT------SEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCceEEEEec-------------CCCcEEEEEEeCCCCEEEEEeCC------CeE
Confidence 35556666532 3688999988765433221 11111111222256667777653 368
Q ss_pred EEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCC-ceEEecCCCCCCCccccc
Q 006645 275 KVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETM-TWDEIDAVGVPPSPRSDH 351 (637)
Q Consensus 275 ~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~-~W~~~~~~~~~p~~r~~h 351 (637)
.+||..++.....-.. ......++.+ ++..++.|+.+ ..+.+||+.+. .....-.. ....-.
T Consensus 80 ~vw~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~d------g~i~vw~~~~~~~~~~~~~~----~~~~v~ 144 (814)
T 3mkq_A 80 RVFNYNTGEKVVDFEA-----HPDYIRSIAVHPTKPYVLSGSDD------LTVKLWNWENNWALEQTFEG----HEHFVM 144 (814)
T ss_dssp EEEETTTCCEEEEEEC-----CSSCEEEEEECSSSSEEEEEETT------SEEEEEEGGGTSEEEEEEEC----CSSCEE
T ss_pred EEEECCCCcEEEEEec-----CCCCEEEEEEeCCCCEEEEEcCC------CEEEEEECCCCceEEEEEcC----CCCcEE
Confidence 8999988876544221 1112223333 45556666643 45889998765 33222111 111122
Q ss_pred EEEEEc-CCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 352 AAAVHA-ERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 352 ~~~~~~-~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
+++... ++.++++|+.+ ..+.+||+.+..
T Consensus 145 ~~~~~p~~~~~l~~~~~d-----g~v~vwd~~~~~ 174 (814)
T 3mkq_A 145 CVAFNPKDPSTFASGCLD-----RTVKVWSLGQST 174 (814)
T ss_dssp EEEEETTEEEEEEEEETT-----SEEEEEETTCSS
T ss_pred EEEEEcCCCCEEEEEeCC-----CeEEEEECCCCc
Confidence 334444 45677777754 358888886543
No 163
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=91.79 E-value=2.8 Score=41.55 Aligned_cols=155 Identities=7% Similarity=-0.027 Sum_probs=83.5
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEE-eCCEEEEEEccCCCCCccee
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIP-WENKLLSIAGHTKDPSEIIQ 273 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~-~~~~lyv~GG~~~~~~~~~~ 273 (637)
++.||+.+... ..+++||+.+++...+... +.. .-++++. -+++||+.+.... .....
T Consensus 55 ~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~-------------~~~-~~~~i~~~~dg~l~v~~~~~~--~~~~~ 113 (333)
T 2dg1_A 55 QGQLFLLDVFE-----GNIFKINPETKEIKRPFVS-------------HKA-NPAAIKIHKDGRLFVCYLGDF--KSTGG 113 (333)
T ss_dssp TSCEEEEETTT-----CEEEEECTTTCCEEEEEEC-------------SSS-SEEEEEECTTSCEEEEECTTS--SSCCE
T ss_pred CCCEEEEECCC-----CEEEEEeCCCCcEEEEeeC-------------CCC-CcceEEECCCCcEEEEeCCCC--CCCce
Confidence 56788876532 3689999999888765321 011 1122332 2568888764321 12347
Q ss_pred EEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCccccc
Q 006645 274 VKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDH 351 (637)
Q Consensus 274 v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h 351 (637)
+++||+.+.....+... ..... ......+ ++.+|+.............|++||+.+.+...+... .....
T Consensus 114 i~~~d~~~~~~~~~~~~--~~~~~-~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~ 185 (333)
T 2dg1_A 114 IFAATENGDNLQDIIED--LSTAY-CIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN-----ISVAN 185 (333)
T ss_dssp EEEECTTSCSCEEEECS--SSSCC-CEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE-----ESSEE
T ss_pred EEEEeCCCCEEEEEEcc--CccCC-cccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC-----CCccc
Confidence 99999988876533221 11111 1222233 567777543211111245799999888777655311 11123
Q ss_pred EEEEEcCC-EEEEEeCCCCCCCcCcEEEEECCC
Q 006645 352 AAAVHAER-YLLIFGGGSHAACFNDLHVLDLQT 383 (637)
Q Consensus 352 ~~~~~~~~-~l~v~GG~~~~~~~~dl~~~d~~t 383 (637)
++++..++ .||+.... .+.|++||+.+
T Consensus 186 ~i~~~~dg~~l~v~~~~-----~~~i~~~d~~~ 213 (333)
T 2dg1_A 186 GIALSTDEKVLWVTETT-----ANRLHRIALED 213 (333)
T ss_dssp EEEECTTSSEEEEEEGG-----GTEEEEEEECT
T ss_pred ceEECCCCCEEEEEeCC-----CCeEEEEEecC
Confidence 34444444 57776532 24689999853
No 164
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=91.79 E-value=11 Score=37.43 Aligned_cols=107 Identities=12% Similarity=0.079 Sum_probs=58.7
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLET 332 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t 332 (637)
++.+++.|+.+. .+.+||+.+..-...-. .......++.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 195 ~~~~l~sg~~d~------~v~~wd~~~~~~~~~~~-----~h~~~v~~v~~~p~~~~l~s~s~d------~~v~iwd~~~ 257 (340)
T 1got_B 195 DTRLFVSGACDA------SAKLWDVREGMCRQTFT-----GHESDINAICFFPNGNAFATGSDD------ATCRLFDLRA 257 (340)
T ss_dssp TSSEEEEEETTS------CEEEEETTTCSEEEEEC-----CCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTT
T ss_pred CCCEEEEEeCCC------cEEEEECCCCeeEEEEc-----CCcCCEEEEEEcCCCCEEEEEcCC------CcEEEEECCC
Confidence 567788887654 48889988765333211 11112223333 46677777754 3588999887
Q ss_pred CceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 333 MTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 333 ~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
..-...-... .....-.+++...++.+++.|+.+ ..+.+||..+..
T Consensus 258 ~~~~~~~~~~--~~~~~v~~~~~s~~g~~l~~g~~d-----~~i~vwd~~~~~ 303 (340)
T 1got_B 258 DQELMTYSHD--NIICGITSVSFSKSGRLLLAGYDD-----FNCNVWDALKAD 303 (340)
T ss_dssp TEEEEEECCT--TCCSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCC
T ss_pred CcEEEEEccC--CcccceEEEEECCCCCEEEEECCC-----CeEEEEEcccCc
Confidence 6533221110 011112233444566677777754 358889976643
No 165
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=91.76 E-value=8 Score=36.64 Aligned_cols=152 Identities=12% Similarity=-0.004 Sum_probs=81.6
Q ss_pred eEEEE-CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe-CCEEEEEEccCCC
Q 006645 190 GAAVV-QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW-ENKLLSIAGHTKD 267 (637)
Q Consensus 190 a~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~-~~~lyv~GG~~~~ 267 (637)
+++.. ++.|||... .+.+++||+.+.....+... ....-++++.. +++||+....
T Consensus 71 ~i~~~~~g~l~v~~~------~~~i~~~d~~~~~~~~~~~~--------------~~~~p~~i~~~~~g~l~v~~~~--- 127 (270)
T 1rwi_B 71 GLAVDGAGTVYVTDF------NNRVVTLAAGSNNQTVLPFD--------------GLNYPEGLAVDTQGAVYVADRG--- 127 (270)
T ss_dssp CEEECTTCCEEEEET------TTEEEEECTTCSCCEECCCC--------------SCSSEEEEEECTTCCEEEEEGG---
T ss_pred eeEECCCCCEEEEcC------CCEEEEEeCCCceEeeeecC--------------CcCCCcceEECCCCCEEEEECC---
Confidence 34443 467888754 24689999887654433211 00111223332 5688887543
Q ss_pred CCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE-CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCC
Q 006645 268 PSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPS 346 (637)
Q Consensus 268 ~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~ 346 (637)
...+.+|+..+.........+ ...+ ..++.. +++||+.... .+.|.+||+.+..-......+
T Consensus 128 ---~~~i~~~~~~~~~~~~~~~~~-~~~p---~~i~~~~~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~~~---- 190 (270)
T 1rwi_B 128 ---NNRVVKLAAGSKTQTVLPFTG-LNDP---DGVAVDNSGNVYVTDTD------NNRVVKLEAESNNQVVLPFTD---- 190 (270)
T ss_dssp ---GTEEEEECTTCCSCEECCCCS-CCSC---CCEEECTTCCEEEEEGG------GTEEEEECTTTCCEEECCCSS----
T ss_pred ---CCEEEEEECCCceeEeecccc-CCCc---eeEEEeCCCCEEEEECC------CCEEEEEecCCCceEeecccC----
Confidence 236888887766544332211 1111 223333 4678876542 356899998876644332111
Q ss_pred cccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCee
Q 006645 347 PRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEW 386 (637)
Q Consensus 347 ~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W 386 (637)
...-.++++..++.|||....+ +.|.+||+.+..-
T Consensus 191 ~~~p~~i~~d~~g~l~v~~~~~-----~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 191 ITAPWGIAVDEAGTVYVTEHNT-----NQVVKLLAGSTTS 225 (270)
T ss_dssp CCSEEEEEECTTCCEEEEETTT-----SCEEEECTTCSCC
T ss_pred CCCceEEEECCCCCEEEEECCC-----CcEEEEcCCCCcc
Confidence 1222344554556788876432 3589999876543
No 166
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=91.41 E-value=7.9 Score=36.18 Aligned_cols=158 Identities=13% Similarity=0.108 Sum_probs=80.8
Q ss_pred eeEEEECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe-CCEEEEEEccCCC
Q 006645 189 HGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW-ENKLLSIAGHTKD 267 (637)
Q Consensus 189 ~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~-~~~lyv~GG~~~~ 267 (637)
-|++.+.+.+|+|=| +.+|+++.....+......... +.+| .....+.... ++++|+|-|.
T Consensus 27 DAi~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~w-------p~Lp-~~iDAa~~~~~~~~iyfFkG~--- 88 (207)
T 1pex_A 27 DAITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSFW-------PELP-NRIDAAYEHPSHDLIFIFRGR--- 88 (207)
T ss_dssp SEEEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHHC-------TTSC-SSCCEEEEETTTTEEEEEETT---
T ss_pred eEEEeCCCcEEEEEC-------CEEEEEeCCCcCCCceehhHhc-------cCCC-CCccEEEEeccCCcEEEEccC---
Confidence 345567899999977 4577777655443322111100 1122 2222222222 6899999875
Q ss_pred CCcceeEEEEECCCCce---EeeccCCCCCCCCCceEEEE-E--CCEEEEEeCCCCCCCCCCceEEEECCCCceEE----
Q 006645 268 PSEIIQVKVFDLQTCSW---STLKTYGKPPVSRGGQSVTL-V--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDE---- 337 (637)
Q Consensus 268 ~~~~~~v~~yd~~t~~W---~~~~~~g~~p~~r~~~~~~~-~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~---- 337 (637)
.+|+|+-.+..- ..+...| .|......-++. . ++++|+|-| +..|+||..+.+-..
T Consensus 89 -----~~w~~~~~~~~~gyPk~I~~~G-lP~~~~~IDAA~~~~~~gk~yfFkG--------~~ywr~d~~~~~~d~gyPr 154 (207)
T 1pex_A 89 -----KFWALNGYDILEGYPKKISELG-LPKEVKKISAAVHFEDTGKTLLFSG--------NQVWRYDDTNHIMDKDYPR 154 (207)
T ss_dssp -----EEEEESTTCCCTTCSEESTTTT-CCTTCCCCCEEEECTTTSEEEEEET--------TEEEEEETTTTEECSSCCC
T ss_pred -----EEEEEeCCeeccCCceeccccC-CCCCCccccEEEEeCCCCEEEEEeC--------CEEEEEeCcCccccCCCCc
Confidence 467776432211 1222222 232111222333 2 479999977 457999987643210
Q ss_pred -ecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 338 -IDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 338 -~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
+... -+-.|..-.++... ++.+|+|-|. ..|.||..+..-.
T Consensus 155 ~i~~~-~~Gip~~iDaAf~~-~g~~YfFkg~-------~y~rf~~~~~~v~ 196 (207)
T 1pex_A 155 LIEED-FPGIGDKVDAVYEK-NGYIYFFNGP-------IQFEYSIWSNRIV 196 (207)
T ss_dssp BHHHH-STTSCSCCSEEEEE-TTEEEEEETT-------EEEEEETTTTEEE
T ss_pred cHHHc-CCCCCCCccEEEEc-CCcEEEEECC-------EEEEEeCCccEEe
Confidence 0000 00112222344443 7789999884 5899998776543
No 167
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=91.38 E-value=3.6 Score=42.82 Aligned_cols=149 Identities=7% Similarity=0.103 Sum_probs=76.7
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe---CCEEEEEEccCCCCCcc
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW---ENKLLSIAGHTKDPSEI 271 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~---~~~lyv~GG~~~~~~~~ 271 (637)
++.+++.|+.++ .|.++|+.+..-..+.... .. ...-.++.+ ++.+++.|+.++
T Consensus 131 ~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~~------------gH-~~~V~~l~f~p~~~~~l~s~s~D~----- 187 (435)
T 4e54_B 131 HPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKGI------------GA-GGSITGLKFNPLNTNQFYASSMEG----- 187 (435)
T ss_dssp CTTCEEEEETTS-----CEEEECSSCCSCCEEECCC------------SS-SCCCCEEEECSSCTTEEEEECSSS-----
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCCceeEEEcc------------CC-CCCEEEEEEeCCCCCEEEEEeCCC-----
Confidence 456778887543 5788888776543332210 00 111122332 456777777654
Q ss_pred eeEEEEECCCCceEeeccCCCCCCCCCceEEEEE-CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccc
Q 006645 272 IQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSD 350 (637)
Q Consensus 272 ~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~ 350 (637)
.|.++|+.+.....+........ ...++... ++.+++.|+.+ ..|.+||+.+..-..+.. ....-
T Consensus 188 -~v~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~g~~d------g~i~~wd~~~~~~~~~~~-----h~~~v 253 (435)
T 4e54_B 188 -TTRLQDFKGNILRVFASSDTINI--WFCSLDVSASSRMVVTGDNV------GNVILLNMDGKELWNLRM-----HKKKV 253 (435)
T ss_dssp -CEEEEETTSCEEEEEECCSSCSC--CCCCEEEETTTTEEEEECSS------SBEEEEESSSCBCCCSBC-----CSSCE
T ss_pred -EEEEeeccCCceeEEeccCCCCc--cEEEEEECCCCCEEEEEeCC------CcEeeeccCcceeEEEec-----ccceE
Confidence 47889998876655543211111 11222222 56778888753 458889987543222210 01111
Q ss_pred cEEEEE-cCCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 351 HAAAVH-AERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 351 h~~~~~-~~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
.++++. .++.+++.|+.++ .|.+||+.+..
T Consensus 254 ~~v~~~p~~~~~~~s~s~d~-----~v~iwd~~~~~ 284 (435)
T 4e54_B 254 THVALNPCCDWFLATASVDQ-----TVKIWDLRQVR 284 (435)
T ss_dssp EEEEECTTCSSEEEEEETTS-----BCCEEETTTCC
T ss_pred EeeeecCCCceEEEEecCcc-----eeeEEeccccc
Confidence 122332 2344777776542 46778876543
No 168
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=91.35 E-value=2 Score=33.05 Aligned_cols=33 Identities=15% Similarity=0.178 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 006645 532 KEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQ 564 (637)
Q Consensus 532 e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~q 564 (637)
..-+++..|+-.+.+++.+-.+.++.|.....+
T Consensus 23 ~L~qEi~~Lr~kv~elEnErlQyEkKLKsTK~E 55 (81)
T 3qh9_A 23 ELLQELRHLKIKVEELENERNQYEWKLKATKAE 55 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 344555556666666665555555555555433
No 169
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=91.35 E-value=2.7 Score=42.28 Aligned_cols=33 Identities=6% Similarity=0.032 Sum_probs=15.4
Q ss_pred HHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q 006645 514 HLIATLKAEKEELESSLSKEKLQSIQLKQDLTE 546 (637)
Q Consensus 514 ~~~~~l~~~~~~le~~~~e~~~~~~~l~~~l~e 546 (637)
.-|..|+.++..+++.-.+..+.+..+.+-+.+
T Consensus 67 ~rIe~L~~~L~~~s~s~~~~~~y~~~~~~~lk~ 99 (390)
T 1deq_A 67 SRINKLRDSLFNYQKNSKDSNTLTKNIVELMRG 99 (390)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 345555555555555444444444444333333
No 170
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=91.32 E-value=3.3 Score=43.18 Aligned_cols=109 Identities=8% Similarity=0.074 Sum_probs=61.7
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE---CCEEEEEeCCCCCCCCCCceEEEECC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV---GTSLVIFGGEDAKRSLLNDLHILDLE 331 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~n~i~~yd~~ 331 (637)
++.+++.|+.++ .|.++|+.+..-..... .........++.+ ++.+++.|+.+ ..|.+||+.
T Consensus 131 ~~~~lasGs~dg------~i~lWd~~~~~~~~~~~---~~gH~~~V~~l~f~p~~~~~l~s~s~D------~~v~iwd~~ 195 (435)
T 4e54_B 131 HPSTVAVGSKGG------DIMLWNFGIKDKPTFIK---GIGAGGSITGLKFNPLNTNQFYASSME------GTTRLQDFK 195 (435)
T ss_dssp CTTCEEEEETTS------CEEEECSSCCSCCEEEC---CCSSSCCCCEEEECSSCTTEEEEECSS------SCEEEEETT
T ss_pred CCCEEEEEeCCC------EEEEEECCCCCceeEEE---ccCCCCCEEEEEEeCCCCCEEEEEeCC------CEEEEeecc
Confidence 345777787755 38888887765433322 1111112223333 45677777764 347889998
Q ss_pred CCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 332 TMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 332 t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
+.....+.... .......++.+..++.+++.|+.+ ..|.++|+....
T Consensus 196 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~g~~d-----g~i~~wd~~~~~ 242 (435)
T 4e54_B 196 GNILRVFASSD--TINIWFCSLDVSASSRMVVTGDNV-----GNVILLNMDGKE 242 (435)
T ss_dssp SCEEEEEECCS--SCSCCCCCEEEETTTTEEEEECSS-----SBEEEEESSSCB
T ss_pred CCceeEEeccC--CCCccEEEEEECCCCCEEEEEeCC-----CcEeeeccCcce
Confidence 87766554321 112222344455566688888754 357888887543
No 171
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=91.22 E-value=11 Score=36.14 Aligned_cols=150 Identities=8% Similarity=-0.052 Sum_probs=79.9
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe-CCEEEEEEccCCCCCccee
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW-ENKLLSIAGHTKDPSEIIQ 273 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~-~~~lyv~GG~~~~~~~~~~ 273 (637)
++.||+.... .+.+++||+. +++..+.... ....-++++.. ++.||+.... .+.
T Consensus 72 ~g~l~v~~~~-----~~~v~~~d~~-g~~~~~~~~~-------------~~~~~~~i~~~~~g~l~v~~~~------~~~ 126 (300)
T 2qc5_A 72 LGDIWFTENG-----ANKIGKLSKK-GGFTEYPLPQ-------------PDSGPYGITEGLNGDIWFTQLN------GDR 126 (300)
T ss_dssp TSCEEEEETT-----TTEEEEECTT-SCEEEEECSS-------------TTCCEEEEEECSTTCEEEEETT------TTE
T ss_pred CCCEEEEecC-----CCeEEEECCC-CCeEEecCCC-------------CCCCCccceECCCCCEEEEccC------CCe
Confidence 4678886431 2458899988 6665443210 11112233333 5788887532 236
Q ss_pred EEEEECCCCceEeeccCCCCCCCCCceEEEEE-CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccE
Q 006645 274 VKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHA 352 (637)
Q Consensus 274 v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~ 352 (637)
+.+||+. +......... ....-+.++.. +++||+.... .+.+++||+ +.++..+..... ...-.+
T Consensus 127 i~~~~~~-g~~~~~~~~~---~~~~~~~i~~d~~g~l~v~~~~------~~~i~~~~~-~g~~~~~~~~~~---~~~~~~ 192 (300)
T 2qc5_A 127 IGKLTAD-GTIYEYDLPN---KGSYPAFITLGSDNALWFTENQ------NNSIGRITN-TGKLEEYPLPTN---AAAPVG 192 (300)
T ss_dssp EEEECTT-SCEEEEECSS---TTCCEEEEEECTTSSEEEEETT------TTEEEEECT-TCCEEEEECSST---TCCEEE
T ss_pred EEEECCC-CCEEEccCCC---CCCCceeEEECCCCCEEEEecC------CCeEEEECC-CCcEEEeeCCCC---CCCcce
Confidence 8899987 6665443210 11111222322 4567776532 346899998 667666532111 112234
Q ss_pred EEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEec
Q 006645 353 AAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 353 ~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l 389 (637)
+++..++.||+.... .+.+++||+ +..+...
T Consensus 193 i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~ 223 (300)
T 2qc5_A 193 ITSGNDGALWFVEIM-----GNKIGRITT-TGEISEY 223 (300)
T ss_dssp EEECTTSSEEEEETT-----TTEEEEECT-TCCEEEE
T ss_pred EEECCCCCEEEEccC-----CCEEEEEcC-CCcEEEE
Confidence 444445668876532 235899998 5556554
No 172
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=91.21 E-value=9.5 Score=41.28 Aligned_cols=162 Identities=11% Similarity=0.086 Sum_probs=79.3
Q ss_pred ceeEEEE--CCEEEEEcccCCCcccCcEEEEEc--cCCeEEEeeecccccCCCCCCCCCCCCc-ccceEEEe----CCEE
Q 006645 188 EHGAAVV--QDKMYIYGGNHNGRYLSDMHILDL--RSWAWSKIQAKAVAESTESPSPALLTPC-AGHSLIPW----ENKL 258 (637)
Q Consensus 188 ~~a~~~~--~~~lyv~GG~~~~~~~~~v~~yd~--~t~~W~~~~~~~~~~~~~~~~~~~p~~r-~~hs~v~~----~~~l 258 (637)
-|+++.. +..||+.+. . +.+.+||+ .+.+-.. ... .+. ..+.+..- +++.
T Consensus 181 ~~~v~~spdg~~l~v~~~-d-----~~V~v~D~~~~t~~~~~--~i~-------------~g~~p~~va~sp~~~~dg~~ 239 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGR-D-----ARIDMIDLWAKEPTKVA--EIK-------------IGIEARSVESSKFKGYEDRY 239 (543)
T ss_dssp EEEEEECTTSCEEEEEET-T-----SEEEEEETTSSSCEEEE--EEE-------------CCSEEEEEEECCSTTCTTTE
T ss_pred cceEEECCCCCEEEEECC-C-----CeEEEEECcCCCCcEEE--EEe-------------cCCCcceEEeCCCcCCCCCE
Confidence 3544333 346776653 1 67999999 6655322 211 111 12222222 4544
Q ss_pred EEEEccCCCCCcceeEEEEECCCCceEeeccCCCC--------CCCCCceEEEEE-CCEEEEEeCCCCCCCCCCceEEEE
Q 006645 259 LSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKP--------PVSRGGQSVTLV-GTSLVIFGGEDAKRSLLNDLHILD 329 (637)
Q Consensus 259 yv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~--------p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~n~i~~yd 329 (637)
.+++++. .+.+.++|..+.+-...-+...+ |.++....+..- +..+|+.... .+.|+++|
T Consensus 240 l~v~~~~-----~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~------~g~i~vvd 308 (543)
T 1nir_A 240 TIAGAYW-----PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE------TGKVLLVN 308 (543)
T ss_dssp EEEEEEE-----SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT------TTEEEEEE
T ss_pred EEEEEcc-----CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC------CCeEEEEE
Confidence 4444432 23688899888764433221111 112222111111 3455555432 46799999
Q ss_pred CCCCceEEecCCCCCCCcccccEEEEEcCC-EEEEEeCCCCCCCcCcEEEEECCCCeeEec
Q 006645 330 LETMTWDEIDAVGVPPSPRSDHAAAVHAER-YLLIFGGGSHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 330 ~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~-~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l 389 (637)
..+..-..+... +..+.-|..++..++ ++|+.+.. .+.|.++|+.+++-...
T Consensus 309 ~~~~~~l~~~~i---~~~~~~~~~~~spdg~~l~va~~~-----~~~v~v~D~~tg~l~~~ 361 (543)
T 1nir_A 309 YKDIDNLTVTSI---GAAPFLHDGGWDSSHRYFMTAANN-----SNKVAVIDSKDRRLSAL 361 (543)
T ss_dssp CTTSSSCEEEEE---ECCSSCCCEEECTTSCEEEEEEGG-----GTEEEEEETTTTEEEEE
T ss_pred ecCCCcceeEEe---ccCcCccCceECCCCCEEEEEecC-----CCeEEEEECCCCeEEEe
Confidence 876542211111 123344455555444 45555432 25688999998876543
No 173
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=91.16 E-value=11 Score=38.00 Aligned_cols=112 Identities=9% Similarity=0.127 Sum_probs=57.6
Q ss_pred EEEEEEccCCCCCcceeEEEEECCCCc------eEeeccCCCCCC-CCCceEEEEE-----CCEE-EEEeCCCCCCCCCC
Q 006645 257 KLLSIAGHTKDPSEIIQVKVFDLQTCS------WSTLKTYGKPPV-SRGGQSVTLV-----GTSL-VIFGGEDAKRSLLN 323 (637)
Q Consensus 257 ~lyv~GG~~~~~~~~~~v~~yd~~t~~------W~~~~~~g~~p~-~r~~~~~~~~-----~~~l-yv~GG~~~~~~~~n 323 (637)
.+++.|+.++ .+.+||+.+.. +..+.... ... ...-.++... ++.. ++.|+.+ +
T Consensus 82 ~~l~s~~~dg------~i~iw~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d------g 148 (397)
T 1sq9_A 82 CLVATTSFSG------DLLFYRITREDETKKVIFEKLDLLD-SDMKKHSFWALKWGASNDRLLSHRLVATDVK------G 148 (397)
T ss_dssp EEEEEEETTS------CEEEEEEEECTTTCCEEEEEECCSC-TTGGGSCEEEEEEECCC----CEEEEEEETT------S
T ss_pred cEEEEEcCCC------CEEEEEccCCcccccccceeecccc-cccCCCcEEEEEEeeccCCCCceEEEEEeCC------C
Confidence 7888887644 47888887766 55553310 000 0111222233 3455 7777653 4
Q ss_pred ceEEEECCC------Cc---eE---EecC--CCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 324 DLHILDLET------MT---WD---EIDA--VGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 324 ~i~~yd~~t------~~---W~---~~~~--~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
.+.+||+.+ .. |. .+.. .........-.++++..++ ++++|+.+ ..+.+||+.+....
T Consensus 149 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-----g~i~i~d~~~~~~~ 220 (397)
T 1sq9_A 149 TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN-----GTVQISELSTLRPL 220 (397)
T ss_dssp CEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-----SEEEEEETTTTEEE
T ss_pred cEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-----CcEEEEECCCCcee
Confidence 578888766 22 11 1110 0000112223455555567 77777753 35899999876543
No 174
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=91.14 E-value=13 Score=37.36 Aligned_cols=167 Identities=12% Similarity=0.062 Sum_probs=81.8
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcceeE
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQV 274 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v 274 (637)
+++.++|....++ ...++++|+.+..-..+.... .......+..-+++.++++... ..+
T Consensus 46 Dg~~l~~~~~~~g--~~~l~~~d~~~g~~~~lt~~~-------------~~~~~~~~~spdg~~l~~~~~~------~~l 104 (388)
T 3pe7_A 46 DGSKLLFGGAFDG--PWNYYLLDLNTQVATQLTEGR-------------GDNTFGGFLSPDDDALFYVKDG------RNL 104 (388)
T ss_dssp TSCEEEEEECTTS--SCEEEEEETTTCEEEECCCSS-------------CBCSSSCEECTTSSEEEEEETT------TEE
T ss_pred CCCEEEEEEcCCC--CceEEEEeCCCCceEEeeeCC-------------CCCccceEEcCCCCEEEEEeCC------CeE
Confidence 4544444442222 246999999998877764321 1111111222345444444321 368
Q ss_pred EEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEE-e--CCCC-------------CCCCCCceEEEECCCCceE
Q 006645 275 KVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIF-G--GEDA-------------KRSLLNDLHILDLETMTWD 336 (637)
Q Consensus 275 ~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~-G--G~~~-------------~~~~~n~i~~yd~~t~~W~ 336 (637)
+.+|+.+++-..+.. .|........... ++++++. - +... .......|+++|+.+.+-.
T Consensus 105 ~~~d~~~g~~~~~~~---~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~ 181 (388)
T 3pe7_A 105 MRVDLATLEENVVYQ---VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST 181 (388)
T ss_dssp EEEETTTCCEEEEEE---CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE
T ss_pred EEEECCCCcceeeee---chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE
Confidence 999999887665533 2222211111221 2333221 1 0000 0112367999999988766
Q ss_pred EecCCCCCCCcccccEEEEEc-CCEEEEEeCCCC-CCCcCcEEEEECCCCeeEecc
Q 006645 337 EIDAVGVPPSPRSDHAAAVHA-ERYLLIFGGGSH-AACFNDLHVLDLQTMEWSRPT 390 (637)
Q Consensus 337 ~~~~~~~~p~~r~~h~~~~~~-~~~l~v~GG~~~-~~~~~dl~~~d~~t~~W~~l~ 390 (637)
.+... ... ........ ++..+++..... ......||.+|+.+.....+.
T Consensus 182 ~l~~~----~~~-~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~ 232 (388)
T 3pe7_A 182 VILQE----NQW-LGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVK 232 (388)
T ss_dssp EEEEE----SSC-EEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESC
T ss_pred EeecC----Ccc-ccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEee
Confidence 66422 111 22333444 454444433221 122458999999887766653
No 175
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=91.14 E-value=2.8 Score=44.62 Aligned_cols=20 Identities=15% Similarity=0.129 Sum_probs=14.3
Q ss_pred CHHHHHHHHHHHHHHhCCCcc
Q 006645 86 ATTEAMRLFVKILEEEDPGWY 106 (637)
Q Consensus 86 s~~~a~~~yv~~~~~~~~~~~ 106 (637)
+..++++..|+..++. |+-.
T Consensus 29 ~~~~~~~~~i~~Fe~~-~gI~ 48 (471)
T 3mq9_A 29 KGYNGLAEVGKKFEKD-TGIK 48 (471)
T ss_dssp SCHHHHHHHHHHHHHH-HCCC
T ss_pred CccHHHHHHHHHHhhC-cCCE
Confidence 4467888888888876 6543
No 176
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=91.12 E-value=17 Score=39.59 Aligned_cols=81 Identities=15% Similarity=0.176 Sum_probs=46.9
Q ss_pred eEEEECCEEEEEcccCCCcccCcEEEEEccCC--eEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCC
Q 006645 190 GAAVVQDKMYIYGGNHNGRYLSDMHILDLRSW--AWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKD 267 (637)
Q Consensus 190 a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~ 267 (637)
+.++.++.||+... ...++.+|..|+ .|+.-.... . .......+-+..++.||+-.+...
T Consensus 110 ~~~~~~~~v~v~~~------dg~l~alD~~tG~~~W~~~~~~~----------~-~~~~~~~~P~v~~g~v~vg~~~~~- 171 (571)
T 2ad6_A 110 GLAYGAGQIVKKQA------NGHLLALDAKTGKINWEVEVCDP----------K-VGSTLTQAPFVAKDTVLMGCSGAE- 171 (571)
T ss_dssp CCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCCG----------G-GTCBCCSCCEEETTEEEEECBCGG-
T ss_pred ccEEECCEEEEEeC------CCEEEEEECCCCCEEEEecCCCC----------C-ccceeccCCEEECCEEEEEecCCc-
Confidence 45677899998754 246999999886 587542110 0 000111223446888876543211
Q ss_pred CCcceeEEEEECCCCc--eEeec
Q 006645 268 PSEIIQVKVFDLQTCS--WSTLK 288 (637)
Q Consensus 268 ~~~~~~v~~yd~~t~~--W~~~~ 288 (637)
......++.||+.|++ |+...
T Consensus 172 ~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 172 LGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp GTCCCEEEEEETTTCCEEEEEES
T ss_pred cCCCCEEEEEECCCCcEEEEEcc
Confidence 1123579999998765 87653
No 177
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=91.11 E-value=1.6 Score=37.64 Aligned_cols=32 Identities=9% Similarity=0.193 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 006645 532 KEKLQSIQLKQDLTEAESQNTDLYKELQSVRG 563 (637)
Q Consensus 532 e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ 563 (637)
+....++.|+-+|+....+...++..+.+.+.
T Consensus 40 elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~ 71 (129)
T 3tnu_B 40 EMNRMIQRLRAEIDNVKKQCANLQNAIADAEQ 71 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 33444444444444444444444444444433
No 178
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=91.07 E-value=0.27 Score=49.07 Aligned_cols=70 Identities=17% Similarity=0.177 Sum_probs=53.1
Q ss_pred ccCCCChHHHHHHhhhheeeeeCCCCCCC--CCCCC---Hh-----h-----hHHH-----HHHhcCCCCCHHHHHHHHH
Q 006645 36 LTSKFSNDSALLLYALYQQATVGPCNVPK--PSSWS---PV-----E-----QSKW-----KSWQGLGNMATTEAMRLFV 95 (637)
Q Consensus 36 ~~~~~~~~~~l~ly~l~kqa~~g~~~~~~--p~~~~---~~-----~-----~~k~-----~aw~~~~~~s~~~a~~~yv 95 (637)
+.-..+.++.++|=||--||..||++... |+.++ +. . ...| ..|++++|||+.+|+..|+
T Consensus 110 g~~~~~~e~a~~Laal~~q~~~Gd~~~~~~~~~~l~~~~~lP~~~~~~~~~~~~~~~~~I~~~~~~~~g~s~~~A~~~yL 189 (294)
T 1ef1_A 110 DDIYCPPETAVLLASYAVQSKYGDFNKEVHKSGYLAGDKLLPQRVLEQHKLNKDQWEERIQVWHEEHRGMLREDAVLEYL 189 (294)
T ss_dssp TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHHHBCCCHHHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHHhCCCCccccChhhccccccCCHHHHhhcCCCHHHHHHHHHHHHHHccCCCHHHHHHHHH
Confidence 44578899999999999999999998653 44432 11 1 1234 5689999999999999999
Q ss_pred HHHHHhCCCcc
Q 006645 96 KILEEEDPGWY 106 (637)
Q Consensus 96 ~~~~~~~~~~~ 106 (637)
+++.+ .|.|.
T Consensus 190 ~~~~~-lp~yG 199 (294)
T 1ef1_A 190 KIAQD-LEMYG 199 (294)
T ss_dssp HHHTT-STTTT
T ss_pred HHHcc-cCccC
Confidence 99985 46653
No 179
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=91.02 E-value=1.9 Score=43.15 Aligned_cols=108 Identities=12% Similarity=0.229 Sum_probs=61.3
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEE-E-CCEEEEEeCCCCCCCCCCceEEEECCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTL-V-GTSLVIFGGEDAKRSLLNDLHILDLET 332 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~-~-~~~lyv~GG~~~~~~~~n~i~~yd~~t 332 (637)
++.++++|+.+ ..+.+||+.+..|..+... ........++. . ++.+++.|+.+ ..+.+||+.+
T Consensus 19 ~~~~l~~~~~d------~~v~i~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~~~~~d------g~i~vwd~~~ 83 (372)
T 1k8k_C 19 DRTQIAICPNN------HEVHIYEKSGNKWVQVHEL---KEHNGQVTGVDWAPDSNRIVTCGTD------RNAYVWTLKG 83 (372)
T ss_dssp TSSEEEEECSS------SEEEEEEEETTEEEEEEEE---ECCSSCEEEEEEETTTTEEEEEETT------SCEEEEEEET
T ss_pred CCCEEEEEeCC------CEEEEEeCCCCcEEeeeee---cCCCCcccEEEEeCCCCEEEEEcCC------CeEEEEECCC
Confidence 56677777653 3688999999877665442 11122222222 2 45667777653 3588999988
Q ss_pred CceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCC
Q 006645 333 MTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTM 384 (637)
Q Consensus 333 ~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~ 384 (637)
..+....... .....-.++....++.++++|+.+ ..+.+||+.+.
T Consensus 84 ~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~d~~~~ 128 (372)
T 1k8k_C 84 RTWKPTLVIL--RINRAARCVRWAPNEKKFAVGSGS-----RVISICYFEQE 128 (372)
T ss_dssp TEEEEEEECC--CCSSCEEEEEECTTSSEEEEEETT-----SSEEEEEEETT
T ss_pred CeeeeeEEee--cCCCceeEEEECCCCCEEEEEeCC-----CEEEEEEecCC
Confidence 8876553221 112222334444455577777653 34667666544
No 180
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=90.98 E-value=14 Score=36.91 Aligned_cols=172 Identities=10% Similarity=0.125 Sum_probs=86.2
Q ss_pred eEEecccCCCCCCCCcceeEE-EECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccce
Q 006645 172 QWIAPPISGQRPKARYEHGAA-VVQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHS 250 (637)
Q Consensus 172 ~W~~~~~~g~~p~~R~~~a~~-~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs 250 (637)
+|..+......| -..++++ .-++.+|+.|.. ..+++-+=...+|..+... ....-++
T Consensus 110 tW~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~------g~v~~S~DgG~tW~~~~~~--------------~~~~~~~ 167 (327)
T 2xbg_A 110 SWSQIPLDPKLP--GSPRLIKALGNGSAEMITNV------GAIYRTKDSGKNWQALVQE--------------AIGVMRN 167 (327)
T ss_dssp SCEECCCCTTCS--SCEEEEEEEETTEEEEEETT------CCEEEESSTTSSEEEEECS--------------CCCCEEE
T ss_pred CceECccccCCC--CCeEEEEEECCCCEEEEeCC------ccEEEEcCCCCCCEEeecC--------------CCcceEE
Confidence 899876421122 1223333 346788888751 1344433335689988542 1112233
Q ss_pred EEEe-CCEEEEEEccCCCCCcceeEEEEE-CCCCceEeeccCCCCCCCCCceEEEEE-CCEEEEEeCCCCCCCCCCceEE
Q 006645 251 LIPW-ENKLLSIAGHTKDPSEIIQVKVFD-LQTCSWSTLKTYGKPPVSRGGQSVTLV-GTSLVIFGGEDAKRSLLNDLHI 327 (637)
Q Consensus 251 ~v~~-~~~lyv~GG~~~~~~~~~~v~~yd-~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~n~i~~ 327 (637)
++.. ++.+|++|-. . .++.-+ ..-..|..+.. +.+...+.++.. ++.+|+.+.. ..+++
T Consensus 168 ~~~~~~~~~~~~g~~-G------~~~~S~d~gG~tW~~~~~----~~~~~~~~~~~~~~g~~~~~~~~-------G~~~~ 229 (327)
T 2xbg_A 168 LNRSPSGEYVAVSSR-G------SFYSTWEPGQTAWEPHNR----TTSRRLHNMGFTPDGRLWMIVNG-------GKIAF 229 (327)
T ss_dssp EEECTTSCEEEEETT-S------SEEEEECTTCSSCEEEEC----CSSSCEEEEEECTTSCEEEEETT-------TEEEE
T ss_pred EEEcCCCcEEEEECC-C------cEEEEeCCCCCceeECCC----CCCCccceeEECCCCCEEEEeCC-------ceEEE
Confidence 3333 4566666532 1 233332 22578998853 233333444332 5678877642 12444
Q ss_pred EECC-CCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecc
Q 006645 328 LDLE-TMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPT 390 (637)
Q Consensus 328 yd~~-t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~ 390 (637)
.+.+ -.+|+.+... ..+.....++++...++.+|++|+.. .+++-.-...+|+.+.
T Consensus 230 s~~D~G~tW~~~~~~-~~~~~~~~~~v~~~~~~~~~~~g~~g------~i~~S~DgG~tW~~~~ 286 (327)
T 2xbg_A 230 SDPDNSENWGELLSP-LRRNSVGFLDLAYRTPNEVWLAGGAG------ALLCSQDGGQTWQQDV 286 (327)
T ss_dssp EETTEEEEECCCBCT-TSSCCSCEEEEEESSSSCEEEEESTT------CEEEESSTTSSCEECG
T ss_pred ecCCCCCeeEeccCC-cccCCcceEEEEecCCCEEEEEeCCC------eEEEeCCCCcccEEcC
Confidence 4333 4579876421 01122223444444456788887631 2444333467899875
No 181
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=90.96 E-value=5.9 Score=39.24 Aligned_cols=109 Identities=13% Similarity=0.151 Sum_probs=56.1
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCC-CceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQT-CSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLE 331 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t-~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~ 331 (637)
++.+++.|+.++ .+.+||+.+ ..-...-. .......++.+ ++.+++.|+.+ +.+.+||+.
T Consensus 186 ~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d------~~i~v~d~~ 248 (369)
T 3zwl_B 186 KGKYIIAGHKDG------KISKYDVSNNYEYVDSID-----LHEKSISDMQFSPDLTYFITSSRD------TNSFLVDVS 248 (369)
T ss_dssp GGCEEEEEETTS------EEEEEETTTTTEEEEEEE-----CCSSCEEEEEECTTSSEEEEEETT------SEEEEEETT
T ss_pred CCCEEEEEcCCC------EEEEEECCCCcEeEEEEe-----cCCCceeEEEECCCCCEEEEecCC------ceEEEEECC
Confidence 456666776543 588999987 33322211 11122223333 45666777643 468999998
Q ss_pred CCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCC---------cCcEEEEECCCCe
Q 006645 332 TMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAAC---------FNDLHVLDLQTME 385 (637)
Q Consensus 332 t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~---------~~dl~~~d~~t~~ 385 (637)
+......-.. .....+++...++..+++|+.++... ...+.+||..+..
T Consensus 249 ~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 306 (369)
T 3zwl_B 249 TLQVLKKYET-----DCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE 306 (369)
T ss_dssp TCCEEEEEEC-----SSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC
T ss_pred CCceeeeecC-----CCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc
Confidence 8765443221 11122344444555666665443211 1157777776654
No 182
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=90.96 E-value=1.6 Score=33.72 Aligned_cols=30 Identities=17% Similarity=0.273 Sum_probs=13.7
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHhhhHH
Q 006645 524 EELESSLSKEKLQSIQLKQDLTEAESQNTD 553 (637)
Q Consensus 524 ~~le~~~~e~~~~~~~l~~~l~e~e~~~~~ 553 (637)
+++...+++.+..++.|+++|...+.++++
T Consensus 9 e~~~~klq~~E~rN~~Le~~v~~le~~Le~ 38 (79)
T 3cvf_A 9 EETQQKVQDLETRNAELEHQLRAMERSLEE 38 (79)
T ss_dssp -CTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 334444444444445555555544444443
No 183
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=90.84 E-value=0.22 Score=49.94 Aligned_cols=72 Identities=15% Similarity=0.037 Sum_probs=53.2
Q ss_pred cccCCCChHHHHHHhhhheeeeeCCCCCC--CCCCCC-----Hh-----hhHHHHHHhcCCCCCHHHHHHHHHHHHHHhC
Q 006645 35 ELTSKFSNDSALLLYALYQQATVGPCNVP--KPSSWS-----PV-----EQSKWKSWQGLGNMATTEAMRLFVKILEEED 102 (637)
Q Consensus 35 ~~~~~~~~~~~l~ly~l~kqa~~g~~~~~--~p~~~~-----~~-----~~~k~~aw~~~~~~s~~~a~~~yv~~~~~~~ 102 (637)
.+.-..+.++.+.|=||--||..||++.. .|+.+. +. .+.=-.+|+++.|||+.||+..|++++.+ .
T Consensus 123 ~G~~~c~~e~a~~LAAl~~Qae~Gd~~~~~~~~~yl~~~~~~P~~~~~~~~~I~~~h~~~~g~s~~eA~~~yL~~a~~-l 201 (296)
T 3qij_A 123 AGRLPCSFATLALLGSYTIQSELGDYDPELHGVDYVSDFKLAPNQTKELEEKVMELHKSYRSMTPAQADLEFLENAKK-L 201 (296)
T ss_dssp HTSSCCCHHHHHHHHHHHHHHHHCSCCHHHHTTCCCTTSCCSSSCCHHHHHHHHHHHHTCCSCCHHHHHHHHHHHHTT-S
T ss_pred cCCCCCCHHHHHHHHHHHHHHhcCCCCccccchhhCcHhhcCCcCHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHhc-c
Confidence 34556889999999999999999999743 233221 11 12223679999999999999999999987 4
Q ss_pred CCccc
Q 006645 103 PGWYS 107 (637)
Q Consensus 103 ~~~~~ 107 (637)
|.|..
T Consensus 202 ~~yG~ 206 (296)
T 3qij_A 202 SMYGV 206 (296)
T ss_dssp TTTTC
T ss_pred cccCc
Confidence 66543
No 184
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=90.83 E-value=6.2 Score=32.68 Aligned_cols=26 Identities=15% Similarity=0.171 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006645 589 METLQKELELLQRQKAASEQAALNAK 614 (637)
Q Consensus 589 ~q~~~~e~~~~~~~~~~~~~~~~~~~ 614 (637)
+++++..+-+..++-+=++.+|.+++
T Consensus 79 LeD~E~k~n~aiErnalLE~El~EKe 104 (111)
T 2v66_B 79 LEDFEQRLNQAIERNAFLESELDEKE 104 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555566566666666677766655
No 185
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=90.76 E-value=0.31 Score=49.17 Aligned_cols=69 Identities=16% Similarity=0.169 Sum_probs=52.4
Q ss_pred ccCCCChHHHHHHhhhheeeeeCCCCCCC--CCCCCH---h-----h-----hHHH-----HHHhcCCCCCHHHHHHHHH
Q 006645 36 LTSKFSNDSALLLYALYQQATVGPCNVPK--PSSWSP---V-----E-----QSKW-----KSWQGLGNMATTEAMRLFV 95 (637)
Q Consensus 36 ~~~~~~~~~~l~ly~l~kqa~~g~~~~~~--p~~~~~---~-----~-----~~k~-----~aw~~~~~~s~~~a~~~yv 95 (637)
+.-..+.++.++|=||--||..||++... |+.++. . . ...| ..|+++.|||+++|+..|+
T Consensus 130 g~~~~~~e~a~~Laal~~Qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL 209 (314)
T 1h4r_A 130 EKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEERITAWYAEHRGRARDEAEMEYL 209 (314)
T ss_dssp TSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHTTSCCCHHHHHHHHHHHHHTTTTCCHHHHHHHHH
T ss_pred CCccCCHHHHHHHHHHHHHHHHCCCCccccchhhcchhhcCCHHHHhhccCCHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 34568999999999999999999998653 443221 1 0 1223 6799999999999999999
Q ss_pred HHHHHhCCCc
Q 006645 96 KILEEEDPGW 105 (637)
Q Consensus 96 ~~~~~~~~~~ 105 (637)
+++.++ |.|
T Consensus 210 ~~~~~l-p~y 218 (314)
T 1h4r_A 210 KIAQDL-EMY 218 (314)
T ss_dssp HHHTTS-TTT
T ss_pred HHHhcc-Ccc
Confidence 999764 665
No 186
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=90.70 E-value=2.6 Score=35.37 Aligned_cols=26 Identities=15% Similarity=0.153 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc
Q 006645 591 TLQKELELLQRQKAASEQAALNAKRQ 616 (637)
Q Consensus 591 ~~~~e~~~~~~~~~~~~~~~~~~~r~ 616 (637)
.+++++..++.+...++.++.+.-.+
T Consensus 88 ~le~~~~~l~~~l~~lk~~l~~~~~~ 113 (117)
T 2zqm_A 88 ALERQEKKLNEKLKELTAQIQSALRP 113 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 45555555666666666666655543
No 187
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=90.66 E-value=23 Score=39.47 Aligned_cols=81 Identities=19% Similarity=0.151 Sum_probs=48.2
Q ss_pred eEEEECCEEEEEcccCCCcccCcEEEEEccCC--eEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCC
Q 006645 190 GAAVVQDKMYIYGGNHNGRYLSDMHILDLRSW--AWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKD 267 (637)
Q Consensus 190 a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~ 267 (637)
+.++.++.||+... ...++.+|..|+ .|+.-.... + ........+-+..++.||+-.+.. .
T Consensus 116 ~~~~~~g~v~v~~~------dg~l~AlDa~TG~~~W~~~~~~~---------~-~~~~~~~~sP~v~~g~v~vg~~~~-~ 178 (689)
T 1yiq_A 116 GVAVWKGKVYVGVL------DGRLEAIDAKTGQRAWSVDTRAD---------H-KRSYTITGAPRVVNGKVVIGNGGA-E 178 (689)
T ss_dssp CCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCSC---------T-TSCCBCCSCCEEETTEEEECCBCT-T
T ss_pred ccEEECCEEEEEcc------CCEEEEEECCCCCEeeeecCcCC---------C-CCCccccCCcEEECCEEEEEeCCC-c
Confidence 35667899988653 246899999886 487643200 0 011122223355688887743321 1
Q ss_pred CCcceeEEEEECCCCc--eEee
Q 006645 268 PSEIIQVKVFDLQTCS--WSTL 287 (637)
Q Consensus 268 ~~~~~~v~~yd~~t~~--W~~~ 287 (637)
......++.||+.|++ |+.-
T Consensus 179 ~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 179 FGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TCCBCEEEEEETTTCCEEEEEE
T ss_pred cCCCCEEEEEECCCCcEEEEec
Confidence 1234579999999876 8765
No 188
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=90.64 E-value=9.5 Score=38.43 Aligned_cols=72 Identities=15% Similarity=0.095 Sum_probs=37.8
Q ss_pred CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCC--CCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCC
Q 006645 306 GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVG--VPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQT 383 (637)
Q Consensus 306 ~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~--~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t 383 (637)
++ +++.|+.+ ..+.+||+.+..-...-... ..+....-.+++...++.+++.|+.++ ....+.+||+.+
T Consensus 197 ~~-~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~--~~g~i~i~d~~~ 267 (397)
T 1sq9_A 197 RG-LIATGFNN------GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN--SFGCITLYETEF 267 (397)
T ss_dssp TS-EEEEECTT------SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET--TEEEEEEEETTT
T ss_pred Cc-eEEEEeCC------CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC--CCceEEEEECCC
Confidence 45 77777643 46899999876543321110 000012223344444555677776431 113689999876
Q ss_pred Cee
Q 006645 384 MEW 386 (637)
Q Consensus 384 ~~W 386 (637)
..-
T Consensus 268 ~~~ 270 (397)
T 1sq9_A 268 GER 270 (397)
T ss_dssp CCE
T ss_pred Ccc
Confidence 643
No 189
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=90.63 E-value=2.7 Score=42.60 Aligned_cols=66 Identities=14% Similarity=0.152 Sum_probs=36.6
Q ss_pred CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEEEEc-CCEEEEEeCCCCCCCcCcEEEEECCCC
Q 006645 306 GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHA-ERYLLIFGGGSHAACFNDLHVLDLQTM 384 (637)
Q Consensus 306 ~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~-~~~l~v~GG~~~~~~~~dl~~~d~~t~ 384 (637)
++..++.|+.+ ..|.+||+.+.+-...-.. ... .-.++++.. ++.+++.||.+ ..|.+||+.+.
T Consensus 150 dg~~l~sgs~d------g~v~iwd~~~~~~~~~~~~---h~~-~v~~v~~s~~~~~~~~s~~~d-----g~v~~wd~~~~ 214 (357)
T 4g56_B 150 DGTQAVSGGKD------FSVKVWDLSQKAVLKSYNA---HSS-EVNCVAACPGKDTIFLSCGED-----GRILLWDTRKP 214 (357)
T ss_dssp SSSEEEEEETT------SCEEEEETTTTEEEEEECC---CSS-CEEEEEECTTCSSCEEEEETT-----SCEEECCTTSS
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEEcC---CCC-CEEEEEEccCCCceeeeeccC-----CceEEEECCCC
Confidence 55677777754 3588999988765433211 111 112233322 33467777754 34788888765
Q ss_pred ee
Q 006645 385 EW 386 (637)
Q Consensus 385 ~W 386 (637)
.-
T Consensus 215 ~~ 216 (357)
T 4g56_B 215 KP 216 (357)
T ss_dssp SC
T ss_pred ce
Confidence 43
No 190
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=90.51 E-value=12 Score=36.59 Aligned_cols=152 Identities=7% Similarity=-0.045 Sum_probs=77.2
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcceeE
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQV 274 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v 274 (637)
++.||++.-. .+.+++||+.+.....+.. ....++.+..-+++||+..+ +.+
T Consensus 24 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~---------------~~~~~~i~~~~dG~l~v~~~--------~~l 75 (297)
T 3g4e_A 24 SNSLLFVDIP-----AKKVCRWDSFTKQVQRVTM---------------DAPVSSVALRQSGGYVATIG--------TKF 75 (297)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTCCEEEEEC---------------SSCEEEEEEBTTSSEEEEET--------TEE
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEeC---------------CCceEEEEECCCCCEEEEEC--------CeE
Confidence 4678887642 2468999999876644321 11112222222566666531 368
Q ss_pred EEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCC-----CCCCCceEEEECCCCceEEecCCCCCCCc
Q 006645 275 KVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAK-----RSLLNDLHILDLETMTWDEIDAVGVPPSP 347 (637)
Q Consensus 275 ~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~-----~~~~n~i~~yd~~t~~W~~~~~~~~~p~~ 347 (637)
++||+.++++..+...... .+........+ ++++|+-.-.... ......++++++.. ....+... .
T Consensus 76 ~~~d~~~g~~~~~~~~~~~-~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~-----~ 148 (297)
T 3g4e_A 76 CALNWKEQSAVVLATVDND-KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQ-----V 148 (297)
T ss_dssp EEEETTTTEEEEEEECCTT-CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEE-----E
T ss_pred EEEECCCCcEEEEEecCCC-CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeec-----c
Confidence 9999999998877542111 11111222223 5677663211110 01235688888753 33333211 1
Q ss_pred ccccEEEEEcC-CEEEEEeCCCCCCCcCcEEEEEC--CCCee
Q 006645 348 RSDHAAAVHAE-RYLLIFGGGSHAACFNDLHVLDL--QTMEW 386 (637)
Q Consensus 348 r~~h~~~~~~~-~~l~v~GG~~~~~~~~dl~~~d~--~t~~W 386 (637)
.....+++..+ +.||+.... .+.|++||+ .+...
T Consensus 149 ~~pngi~~spdg~~lyv~~~~-----~~~i~~~~~d~~~G~~ 185 (297)
T 3g4e_A 149 DISNGLDWSLDHKIFYYIDSL-----SYSVDAFDYDLQTGQI 185 (297)
T ss_dssp SBEEEEEECTTSCEEEEEEGG-----GTEEEEEEECTTTCCE
T ss_pred ccccceEEcCCCCEEEEecCC-----CCcEEEEeccCCCCcc
Confidence 11124444433 467777643 246888876 44443
No 191
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=90.50 E-value=4.4 Score=39.71 Aligned_cols=160 Identities=7% Similarity=-0.069 Sum_probs=79.9
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCC-----CC
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKD-----PS 269 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~-----~~ 269 (637)
++.||+..+ +.+++||+.++++..+.... ...+..+....++.-+++||+-.-.... ..
T Consensus 64 dG~l~v~~~-------~~l~~~d~~~g~~~~~~~~~---------~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~ 127 (297)
T 3g4e_A 64 SGGYVATIG-------TKFCALNWKEQSAVVLATVD---------NDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLER 127 (297)
T ss_dssp TSSEEEEET-------TEEEEEETTTTEEEEEEECC---------TTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCT
T ss_pred CCCEEEEEC-------CeEEEEECCCCcEEEEEecC---------CCCCCCCCCCEEECCCCCEEEecCCcccccccccC
Confidence 456666432 46999999999988775431 0112222222222236777764311110 12
Q ss_pred cceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEEC--CCCceEEecCCCCCC
Q 006645 270 EIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDL--ETMTWDEIDAVGVPP 345 (637)
Q Consensus 270 ~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~--~t~~W~~~~~~~~~p 345 (637)
....++++|+. +....+... ... ....+.. +..||+.... .+.|++||+ .+............+
T Consensus 128 ~~~~l~~~d~~-g~~~~~~~~--~~~---pngi~~spdg~~lyv~~~~------~~~i~~~~~d~~~G~~~~~~~~~~~~ 195 (297)
T 3g4e_A 128 HQGALYSLFPD-HHVKKYFDQ--VDI---SNGLDWSLDHKIFYYIDSL------SYSVDAFDYDLQTGQISNRRSVYKLE 195 (297)
T ss_dssp TCEEEEEECTT-SCEEEEEEE--ESB---EEEEEECTTSCEEEEEEGG------GTEEEEEEECTTTCCEEEEEEEEECC
T ss_pred CCcEEEEEECC-CCEEEEeec--ccc---ccceEEcCCCCEEEEecCC------CCcEEEEeccCCCCcccCcEEEEECC
Confidence 34578888875 333333211 111 1123332 3468877643 356889986 455443211000001
Q ss_pred -CcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 346 -SPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 346 -~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
....-.++++..++.|||..... +.|++||+.+....
T Consensus 196 ~~~~~p~g~~~d~~G~lwva~~~~-----~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 196 KEEQIPDGMCIDAEGKLWVACYNG-----GRVIRLDPVTGKRL 233 (297)
T ss_dssp GGGCEEEEEEEBTTSCEEEEEETT-----TEEEEECTTTCCEE
T ss_pred CCCCCCCeeEECCCCCEEEEEcCC-----CEEEEEcCCCceEE
Confidence 11122345555566788875321 34999999876654
No 192
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=90.41 E-value=4.7 Score=42.36 Aligned_cols=15 Identities=20% Similarity=0.286 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHHHHH
Q 006645 595 ELELLQRQKAASEQA 609 (637)
Q Consensus 595 e~~~~~~~~~~~~~~ 609 (637)
.++++.++++.++..
T Consensus 176 ~~~~l~~ki~~l~~~ 190 (464)
T 1m1j_B 176 VIDSLHKKIQKLENA 190 (464)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 193
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=90.41 E-value=6.1 Score=31.94 Aligned_cols=40 Identities=18% Similarity=0.248 Sum_probs=19.0
Q ss_pred HHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHH
Q 006645 516 IATLKAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLY 555 (637)
Q Consensus 516 ~~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~ 555 (637)
+..|+.+...+-..+.+.+.+...+..+|...+.+..++.
T Consensus 13 L~~l~~eE~~L~~eL~~lEke~~~l~~el~~le~E~~~L~ 52 (96)
T 3q8t_A 13 LKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLD 52 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 3334444444445555555555555555554444444433
No 194
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=90.32 E-value=5.2 Score=39.14 Aligned_cols=53 Identities=21% Similarity=0.108 Sum_probs=30.6
Q ss_pred ceEEEECCCCceEEecCCCCCCCcccccEEEEEcCC-EEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 324 DLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAER-YLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 324 ~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~-~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
.+++||+.+.+-..+... +.....+++++..++ .||+. .+.+++||+.+..-.
T Consensus 220 ~v~~~d~~~~~~~~~~~~---~~~~~~~~~~~s~dg~~l~~~--------~~~v~~~d~~~~~~~ 273 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVR---IMDVFYFSTAVNPAKTRAFGA--------YNVLESFDLEKNASI 273 (337)
T ss_dssp EEEEEETTTCCEEEEEEE---ECSSCEEEEEECTTSSEEEEE--------ESEEEEEETTTTEEE
T ss_pred ceEEEeCCCCCceEeecC---CCCCceeeEEECCCCCEEEEe--------CCeEEEEECCCCcCc
Confidence 589999998876533211 112222334444444 45544 157999999887654
No 195
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=90.29 E-value=2.1 Score=32.96 Aligned_cols=16 Identities=13% Similarity=0.393 Sum_probs=5.9
Q ss_pred HHHHHHHHHhhhHHHH
Q 006645 540 LKQDLTEAESQNTDLY 555 (637)
Q Consensus 540 l~~~l~e~e~~~~~~~ 555 (637)
++++|......+...+
T Consensus 29 i~EELs~vr~~ni~~e 44 (81)
T 1wt6_A 29 LSREMEAIRTDNQNFA 44 (81)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3334433333333333
No 196
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=90.26 E-value=5.9 Score=34.78 Aligned_cols=42 Identities=21% Similarity=0.305 Sum_probs=21.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhHHH
Q 006645 550 QNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQTMET 591 (637)
Q Consensus 550 ~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~~q~ 591 (637)
...+..+.|..++..|.....|....+.++.+|...|..+..
T Consensus 74 KyeE~~RKl~~~E~dLeraeeRae~aE~k~~eLEeeL~~~~~ 115 (147)
T 2b9c_A 74 KYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTN 115 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444555554555555555555555555555433
No 197
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=90.24 E-value=1.8 Score=46.44 Aligned_cols=14 Identities=29% Similarity=0.377 Sum_probs=6.4
Q ss_pred eEEEEECCCCceEe
Q 006645 273 QVKVFDLQTCSWST 286 (637)
Q Consensus 273 ~v~~yd~~t~~W~~ 286 (637)
.+..+|+..+....
T Consensus 145 ~L~~L~Ls~N~l~~ 158 (487)
T 3oja_A 145 RVQYLDLKLNEIDT 158 (487)
T ss_dssp SEEEEECTTSCCCE
T ss_pred CCCEEECCCCCCCC
Confidence 34455555444433
No 198
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=90.22 E-value=13 Score=35.54 Aligned_cols=160 Identities=11% Similarity=0.117 Sum_probs=84.7
Q ss_pred eeEEEE--CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEE-eCCEEEEEEccC
Q 006645 189 HGAAVV--QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIP-WENKLLSIAGHT 265 (637)
Q Consensus 189 ~a~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~-~~~~lyv~GG~~ 265 (637)
++++.. ++.|||.+.. ..+.+.+||.....-..+... ....-+.++. -+++||+....
T Consensus 80 ~~i~~~~~~g~l~v~~~~----~~~~i~~~d~~g~~~~~~~~~--------------~~~~~~~i~~~~~g~l~v~~~~- 140 (286)
T 1q7f_A 80 NRVAVVRNSGDIIVTERS----PTHQIQIYNQYGQFVRKFGAT--------------ILQHPRGVTVDNKGRIIVVECK- 140 (286)
T ss_dssp EEEEEETTTTEEEEEECG----GGCEEEEECTTSCEEEEECTT--------------TCSCEEEEEECTTSCEEEEETT-
T ss_pred eEEEEEcCCCeEEEEcCC----CCCEEEEECCCCcEEEEecCc--------------cCCCceEEEEeCCCCEEEEECC-
Confidence 444443 6789988642 124688999554433333110 1011122332 25688887543
Q ss_pred CCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCC
Q 006645 266 KDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGV 343 (637)
Q Consensus 266 ~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~ 343 (637)
.+.+.+||+.......+...+.. .......+ ++.||+.+.. .+.|++||+.......+...+.
T Consensus 141 -----~~~i~~~~~~g~~~~~~~~~~~~----~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~~~~~~~~g~ 205 (286)
T 1q7f_A 141 -----VMRVIIFDQNGNVLHKFGCSKHL----EFPNGVVVNDKQEIFISDNR------AHCVKVFNYEGQYLRQIGGEGI 205 (286)
T ss_dssp -----TTEEEEECTTSCEEEEEECTTTC----SSEEEEEECSSSEEEEEEGG------GTEEEEEETTCCEEEEESCTTT
T ss_pred -----CCEEEEEcCCCCEEEEeCCCCcc----CCcEEEEECCCCCEEEEECC------CCEEEEEcCCCCEEEEEccCCc
Confidence 23688999766544444321111 11222333 4688887543 4579999987665555543221
Q ss_pred CCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEec
Q 006645 344 PPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 344 ~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l 389 (637)
. ..-.++++..++.|||....++ ..|.+||+....-..+
T Consensus 206 ~---~~p~~i~~d~~G~l~v~~~~~~----~~i~~~~~~g~~~~~~ 244 (286)
T 1q7f_A 206 T---NYPIGVGINSNGEILIADNHNN----FNLTIFTQDGQLISAL 244 (286)
T ss_dssp S---CSEEEEEECTTCCEEEEECSSS----CEEEEECTTSCEEEEE
T ss_pred c---CCCcEEEECCCCCEEEEeCCCC----EEEEEECCCCCEEEEE
Confidence 1 1123455545667888765421 1689999776544444
No 199
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=90.20 E-value=5.1 Score=31.90 Aligned_cols=38 Identities=21% Similarity=0.189 Sum_probs=17.6
Q ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006645 574 KLEVDVAELRQKLQTMETLQKELELLQRQKAASEQAALNAK 614 (637)
Q Consensus 574 ~le~~~~el~~~lq~~q~~~~e~~~~~~~~~~~~~~~~~~~ 614 (637)
+|.++...|+.+ +.+.+.....+..++..++.++.+.+
T Consensus 46 ~l~~ek~~L~~q---l~eaEe~~~~L~~~K~eLE~~l~el~ 83 (89)
T 3bas_A 46 TLLEQKNDLFGS---MKQLEDKVEELLSKNYHLENEVARLK 83 (89)
T ss_dssp HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444 33333444444555555555554443
No 200
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=90.17 E-value=1.5 Score=37.87 Aligned_cols=34 Identities=21% Similarity=0.287 Sum_probs=15.3
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 006645 530 LSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRG 563 (637)
Q Consensus 530 ~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ 563 (637)
+.+.+..++.|+-+|+....+...++..+.+.+.
T Consensus 40 i~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~ 73 (131)
T 3tnu_A 40 ISELRRTMQNLEIELQSQLSMKASLENSLEETKG 73 (131)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3344444444555554444444444444444433
No 201
>3ni0_A Bone marrow stromal antigen 2; coiled-coil, antiviral defense, immune system, GPI anchor; 1.60A {Mus musculus}
Probab=90.14 E-value=3.5 Score=32.57 Aligned_cols=17 Identities=41% Similarity=0.563 Sum_probs=7.3
Q ss_pred hhhhhHHHHHHHHHHHH
Q 006645 571 RCFKLEVDVAELRQKLQ 587 (637)
Q Consensus 571 ~~~~le~~~~el~~~lq 587 (637)
+..+|+.||..|.++||
T Consensus 68 ~v~elqgEI~~Lnq~Lq 84 (99)
T 3ni0_A 68 RIKELENEVTKLNQELE 84 (99)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33444444444444443
No 202
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=90.13 E-value=10 Score=42.45 Aligned_cols=180 Identities=9% Similarity=0.036 Sum_probs=89.1
Q ss_pred EECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCc
Q 006645 193 VVQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSE 270 (637)
Q Consensus 193 ~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~ 270 (637)
..|+++|++-- .++.....+|+.+..+..|..+-...... ...........+ +++.++++..... ..
T Consensus 81 ~dG~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~lld~~~l~---------~~~~~~~~~~~~SPDg~~la~~~~~~G-~~ 149 (710)
T 2xdw_A 81 KKGKRYFYFYN-TGLQNQRVLYVQDSLEGEARVFLDPNILS---------DDGTVALRGYAFSEDGEYFAYGLSASG-SD 149 (710)
T ss_dssp EETTEEEEEEE-CSSCSSCEEEEESSTTSCCEEEECGGGGC---------TTSCEEEEEEEECTTSSEEEEEEEETT-CS
T ss_pred EECCEEEEEEE-cCCceEEEEEEEcCCCCCcEEEECHHHhc---------cCCCEEEEEEEECCCCCEEEEEEcCCC-Cc
Confidence 45666665532 22334457788887777777653221000 001111122222 5655555543222 23
Q ss_pred ceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE-CCEEEEEeCCCCC----------CCCCCceEEEECCCCceE--E
Q 006645 271 IIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GTSLVIFGGEDAK----------RSLLNDLHILDLETMTWD--E 337 (637)
Q Consensus 271 ~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~----------~~~~n~i~~yd~~t~~W~--~ 337 (637)
...++++|+.+++....... ... ....+.. +++.++++..... ..+...|+++++.+.... .
T Consensus 150 ~~~i~v~d~~tg~~~~~~~~----~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~ 224 (710)
T 2xdw_A 150 WVTIKFMKVDGAKELPDVLE----RVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDIL 224 (710)
T ss_dssp CEEEEEEETTTTEEEEEEEE----EEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEE
T ss_pred eEEEEEEECCCCCCCccccc----Ccc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceE
Confidence 45899999999988764321 111 1122222 4444444443322 023456999999887643 2
Q ss_pred ecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCC------C--eeEecc
Q 006645 338 IDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQT------M--EWSRPT 390 (637)
Q Consensus 338 ~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t------~--~W~~l~ 390 (637)
+... ...+....+..+..+++.++++........++++++|+.+ . .+..+.
T Consensus 225 v~~~--~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~ 283 (710)
T 2xdw_A 225 CAEF--PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLI 283 (710)
T ss_dssp EECC--TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEE
T ss_pred Eecc--CCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEee
Confidence 2111 1123333344444455444444322222256899999876 4 577764
No 203
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=89.98 E-value=2.5 Score=46.29 Aligned_cols=14 Identities=36% Similarity=0.316 Sum_probs=6.1
Q ss_pred hHHHHHHHHHHHHh
Q 006645 575 LEVDVAELRQKLQT 588 (637)
Q Consensus 575 le~~~~el~~~lq~ 588 (637)
+++...-|..+|++
T Consensus 543 ~~e~~~~~~~~~~~ 556 (592)
T 1f5n_A 543 LKEQERTLALKLQE 556 (592)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33333444444444
No 204
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=89.86 E-value=7.4 Score=41.97 Aligned_cols=111 Identities=13% Similarity=0.069 Sum_probs=53.0
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCC------ceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceE
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTC------SWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLH 326 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~------~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~ 326 (637)
++.+++.|+.++ .+.+||+.++ ....+.. .........+..+ +++.++++|.+... ...++
T Consensus 77 ~~~~l~s~~~dg------~v~vw~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~~~~~~~--~~~v~ 145 (615)
T 1pgu_A 77 GSQYLCSGDESG------KVIVWGWTFDKESNSVEVNVKSE---FQVLAGPISDISWDFEGRRLCVVGEGRDN--FGVFI 145 (615)
T ss_dssp TCCEEEEEETTS------EEEEEEEEEEGGGTEEEEEEEEE---EECCSSCEEEEEECTTSSEEEEEECCSSC--SEEEE
T ss_pred CCCEEEEecCCC------EEEEEeCCCCcccccccccccch---hhcccccEEEEEEeCCCCEEEEeccCCCC--ccEEE
Confidence 567777777643 5778887654 3333322 1111112223333 45566666644322 34566
Q ss_pred EEECCCCceEEecCCCCCCCcccccEEEEEcCC-EEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 327 ILDLETMTWDEIDAVGVPPSPRSDHAAAVHAER-YLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 327 ~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~-~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
+||... .-..+. .....-.+++...++ .+++.|+.+ ..+.+||+.+..-.
T Consensus 146 ~~d~~~-~~~~~~-----~~~~~v~~~~~~~~~~~~l~~~~~d-----~~v~vwd~~~~~~~ 196 (615)
T 1pgu_A 146 SWDSGN-SLGEVS-----GHSQRINACHLKQSRPMRSMTVGDD-----GSVVFYQGPPFKFS 196 (615)
T ss_dssp ETTTCC-EEEECC-----SCSSCEEEEEECSSSSCEEEEEETT-----TEEEEEETTTBEEE
T ss_pred EEECCC-cceeee-----cCCccEEEEEECCCCCcEEEEEeCC-----CcEEEEeCCCccee
Confidence 666222 111111 111122233343344 367777653 45888898765543
No 205
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=89.76 E-value=10 Score=43.07 Aligned_cols=145 Identities=12% Similarity=0.089 Sum_probs=78.4
Q ss_pred cEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe-CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccC
Q 006645 212 DMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW-ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTY 290 (637)
Q Consensus 212 ~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~ 290 (637)
.+++||+.++++..+.... +..+... -.+++.. ++.|++-.. +.+++||+.+++|......
T Consensus 428 Gl~~~d~~~~~~~~~~~~~---------~~l~~~~-v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~ 489 (795)
T 4a2l_A 428 GLSILHRNSGQVENFNQRN---------SQLVNEN-VYAILPDGEGNLWLGTL--------SALVRFNPEQRSFTTIEKE 489 (795)
T ss_dssp EEEEEETTTCCEEEECTTT---------SCCSCSC-EEEEEECSSSCEEEEES--------SCEEEEETTTTEEEECCBC
T ss_pred ceeEEeCCCCcEEEeecCC---------CCcCCCe-eEEEEECCCCCEEEEec--------CceeEEeCCCCeEEEcccc
Confidence 4899999999888774321 1111111 1222222 467776542 2488999999999887542
Q ss_pred CCC-CCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCC-Cc-ccccEEEEEcCCEEEEEe
Q 006645 291 GKP-PVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPP-SP-RSDHAAAVHAERYLLIFG 365 (637)
Q Consensus 291 g~~-p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p-~~-r~~h~~~~~~~~~l~v~G 365 (637)
... +.+.....+... ++.|++-.. +.+++||+.+..+ .+......+ .+ ..-.+++...++.|+|..
T Consensus 490 ~~~~~~~~~~i~~i~~d~~g~lWigt~--------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT 560 (795)
T 4a2l_A 490 KDGTPVVSKQITTLFRDSHKRLWIGGE--------EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGT 560 (795)
T ss_dssp TTCCBCCCCCEEEEEECTTCCEEEEES--------SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEE
T ss_pred ccccccCCceEEEEEECCCCCEEEEeC--------CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEe
Confidence 100 111111122222 456776432 2489999998888 543210011 11 112223333456677743
Q ss_pred CCCCCCCcCcEEEEECCCCeeEecc
Q 006645 366 GGSHAACFNDLHVLDLQTMEWSRPT 390 (637)
Q Consensus 366 G~~~~~~~~dl~~~d~~t~~W~~l~ 390 (637)
. +.+++||+.+..+....
T Consensus 561 ~-------~Gl~~~d~~~~~~~~~~ 578 (795)
T 4a2l_A 561 R-------EGFYCFNEKDKQIKRYN 578 (795)
T ss_dssp S-------SCEEEEETTTTEEEEEC
T ss_pred C-------CCceeECCCCCcEEEeC
Confidence 2 14899999999888764
No 206
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.74 E-value=7.4 Score=39.18 Aligned_cols=153 Identities=10% Similarity=0.029 Sum_probs=79.2
Q ss_pred CcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe-CCE-EEEEEccCCCCCcceeEEEEECCCCceEeec
Q 006645 211 SDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW-ENK-LLSIAGHTKDPSEIIQVKVFDLQTCSWSTLK 288 (637)
Q Consensus 211 ~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~-~~~-lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 288 (637)
..++++|+.++....+... .....+....- ++. |++... .........++.+|+.+..+..+.
T Consensus 168 ~~l~~~d~~~g~~~~~~~~--------------~~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~ 232 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQD--------------TAWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIK 232 (396)
T ss_dssp EEEEEEETTTCCEEEEEEE--------------SSCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESS
T ss_pred ceEEEEECCCCcEEeeccC--------------CcccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEee
Confidence 4689999999887766432 11122222222 344 444432 221122357999999888777664
Q ss_pred cCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEEEEc-CCEEEEEe
Q 006645 289 TYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHA-ERYLLIFG 365 (637)
Q Consensus 289 ~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~-~~~l~v~G 365 (637)
.. .+........+ +++.+++.+..... ....|+++|+.+.....+... +. +..+... ++.+++++
T Consensus 233 ~~----~~~~~~~~~~~spdg~~l~~~~~~~~~-~~~~l~~~d~~~g~~~~l~~~---~~----~~~~~s~~dg~~l~~~ 300 (396)
T 3c5m_A 233 EH----AEGESCTHEFWIPDGSAMAYVSYFKGQ-TDRVIYKANPETLENEEVMVM---PP----CSHLMSNFDGSLMVGD 300 (396)
T ss_dssp CC----CTTEEEEEEEECTTSSCEEEEEEETTT-CCEEEEEECTTTCCEEEEEEC---CS----EEEEEECSSSSEEEEE
T ss_pred cc----CCCccccceEECCCCCEEEEEecCCCC-ccceEEEEECCCCCeEEeeeC---CC----CCCCccCCCCceEEEe
Confidence 31 11111122222 44433333322111 123499999998887776432 21 1233444 55566665
Q ss_pred CCCC-----------CCCcCcEEEEECCCCeeEecc
Q 006645 366 GGSH-----------AACFNDLHVLDLQTMEWSRPT 390 (637)
Q Consensus 366 G~~~-----------~~~~~dl~~~d~~t~~W~~l~ 390 (637)
+... ......++++|+.+.....+.
T Consensus 301 ~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 301 GCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLC 336 (396)
T ss_dssp ECCC----------CCCCCCEEEEEETTTTBCCEEE
T ss_pred cCCcceeeccccccccCCCCcEEEEecccCceEEcc
Confidence 4221 012357999999887765553
No 207
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=89.68 E-value=2.7 Score=50.40 Aligned_cols=147 Identities=10% Similarity=0.102 Sum_probs=76.1
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcceeE
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQV 274 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v 274 (637)
++..+++|+.+ ..+..||..+......... ........+..-++..++.||.++ .+
T Consensus 972 ~g~~l~~g~~~-----g~i~i~d~~~~~~~~~~~~-------------h~~~v~~l~~s~dg~~l~s~~~dg------~i 1027 (1249)
T 3sfz_A 972 HLEYVAFGDED-----GAIKIIELPNNRVFSSGVG-------------HKKAVRHIQFTADGKTLISSSEDS------VI 1027 (1249)
T ss_dssp TSSEEEEEETT-----SCCEEEETTTTSCEEECCC-------------CSSCCCCEEECSSSSCEEEECSSS------BE
T ss_pred CCCEEEEEcCC-----CCEEEEEcCCCceeeeccc-------------CCCceEEEEECCCCCEEEEEcCCC------EE
Confidence 45566666533 3578888887654332110 111111222223566777777643 58
Q ss_pred EEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEE
Q 006645 275 KVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAA 354 (637)
Q Consensus 275 ~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~ 354 (637)
.+||+.++....... ....-.++....+..++.|+.+ ..+.+||+.+.+-...-.. ... .-.+++
T Consensus 1028 ~vwd~~~~~~~~~~~-----~~~~v~~~~~~~~~~l~~~~~d------g~v~vwd~~~~~~~~~~~~---~~~-~v~~~~ 1092 (1249)
T 3sfz_A 1028 QVWNWQTGDYVFLQA-----HQETVKDFRLLQDSRLLSWSFD------GTVKVWNVITGRIERDFTC---HQG-TVLSCA 1092 (1249)
T ss_dssp EEEETTTTEEECCBC-----CSSCEEEEEECSSSEEEEEESS------SEEEEEETTTTCCCEEEEC---CSS-CCCCEE
T ss_pred EEEECCCCceEEEec-----CCCcEEEEEEcCCCcEEEEECC------CcEEEEECCCCceeEEEcc---cCC-cEEEEE
Confidence 899999887664422 1111122233334445555543 4588999887654322111 111 122344
Q ss_pred EEcCCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 355 VHAERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 355 ~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
+..++.+++.|+.++ .+.+||+.+..
T Consensus 1093 ~s~d~~~l~s~s~d~-----~v~iwd~~~~~ 1118 (1249)
T 3sfz_A 1093 ISSDATKFSSTSADK-----TAKIWSFDLLS 1118 (1249)
T ss_dssp ECSSSSSCEEECCSS-----CCCEECSSSSS
T ss_pred ECCCCCEEEEEcCCC-----cEEEEECCCcc
Confidence 445566777777543 46777776543
No 208
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=89.67 E-value=21 Score=42.60 Aligned_cols=145 Identities=12% Similarity=0.082 Sum_probs=76.6
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~ 272 (637)
++.+++.||.+ ..+.+||..+..-...-. .....-.++.+ ++.+++.||.++
T Consensus 626 ~~~~l~s~~~d-----~~i~vw~~~~~~~~~~~~---------------~h~~~v~~~~~s~~~~~l~s~~~d~------ 679 (1249)
T 3sfz_A 626 DGQRIASCGAD-----KTLQVFKAETGEKLLDIK---------------AHEDEVLCCAFSSDDSYIATCSADK------ 679 (1249)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTCCEEEEEC---------------CCSSCEEEEEECTTSSEEEEEETTS------
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCCEEEEec---------------cCCCCEEEEEEecCCCEEEEEeCCC------
Confidence 46666777643 358899998876432211 01111223333 566777776533
Q ss_pred eEEEEECCCCceEeeccCCCCCCCCCceEEEEE----CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcc
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV----GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPR 348 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r 348 (637)
.+.++|+.+++....-. .......++.+ ++.+++.|+.+ ..+.+||+.+......-.. ...
T Consensus 680 ~v~vwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~l~sg~~d------~~v~vwd~~~~~~~~~~~~----h~~ 744 (1249)
T 3sfz_A 680 KVKIWDSATGKLVHTYD-----EHSEQVNCCHFTNKSNHLLLATGSND------FFLKLWDLNQKECRNTMFG----HTN 744 (1249)
T ss_dssp EEEEEETTTCCEEEEEE-----CCSSCEEEEEECSSSSCCEEEEEETT------SCEEEEETTSSSEEEEECC----CSS
T ss_pred eEEEEECCCCceEEEEc-----CCCCcEEEEEEecCCCceEEEEEeCC------CeEEEEECCCcchhheecC----CCC
Confidence 58899998876544322 11222233333 23455666543 4588999988765433211 111
Q ss_pred cccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 349 SDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 349 ~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
.-.++++..++.+++.|+.+ ..+.+||+.+..
T Consensus 745 ~v~~~~~sp~~~~l~s~s~d-----g~v~vwd~~~~~ 776 (1249)
T 3sfz_A 745 SVNHCRFSPDDELLASCSAD-----GTLRLWDVRSAN 776 (1249)
T ss_dssp CEEEEEECSSTTEEEEEESS-----SEEEEEEGGGTE
T ss_pred CEEEEEEecCCCEEEEEECC-----CeEEEEeCCCCc
Confidence 12233344455566777653 346777776553
No 209
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=89.63 E-value=17 Score=35.94 Aligned_cols=149 Identities=12% Similarity=0.034 Sum_probs=78.6
Q ss_pred CcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEE-eCCEEEEEEccCCCCCcceeEEEEECCCC--ceEee
Q 006645 211 SDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIP-WENKLLSIAGHTKDPSEIIQVKVFDLQTC--SWSTL 287 (637)
Q Consensus 211 ~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~--~W~~~ 287 (637)
+.++++|+.+++........ .... -+.++. -++.||+.... ...|.+||+... .-..+
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~------------~~~~-p~gia~d~~g~l~v~d~~------~~~v~~~~~~g~~~~~~~~ 129 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKN------------LFYL-PHGLSIDTDGNYWVTDVA------LHQVFKLDPHSKEGPLLIL 129 (329)
T ss_dssp CCEEEECTTTCCEEEEECTT------------TCSS-EEEEEECTTSCEEEEETT------TTEEEEECTTCSSCCSEEE
T ss_pred CcEEEEECCCCeEEeccCCC------------ccCC-ceEEEECCCCCEEEEECC------CCEEEEEeCCCCeEEEEEe
Confidence 46999999887764332110 0111 122222 25788887653 246899998665 22223
Q ss_pred ccCC---CCCCCCCceEEEEE---CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCC----CCc-ccccEEEEE
Q 006645 288 KTYG---KPPVSRGGQSVTLV---GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVP----PSP-RSDHAAAVH 356 (637)
Q Consensus 288 ~~~g---~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~----p~~-r~~h~~~~~ 356 (637)
...+ ...........+.+ ++.||+..++. .+.|.+||++...-..+...+.. +.. ..-+++++.
T Consensus 130 ~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~-----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d 204 (329)
T 3fvz_A 130 GRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC-----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALV 204 (329)
T ss_dssp SBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS-----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEE
T ss_pred cccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC-----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEE
Confidence 2111 11111112223333 57899987631 35689999665544444322211 111 112445555
Q ss_pred cC-CEEEEEeCCCCCCCcCcEEEEECCCCeeEe
Q 006645 357 AE-RYLLIFGGGSHAACFNDLHVLDLQTMEWSR 388 (637)
Q Consensus 357 ~~-~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~ 388 (637)
.+ +.|||....+ +.|.+||+.+.....
T Consensus 205 ~~~g~l~v~d~~~-----~~I~~~~~~~G~~~~ 232 (329)
T 3fvz_A 205 PHLDQLCVADREN-----GRIQCFKTDTKEFVR 232 (329)
T ss_dssp TTTTEEEEEETTT-----TEEEEEETTTCCEEE
T ss_pred CCCCEEEEEECCC-----CEEEEEECCCCcEEE
Confidence 54 7899987543 468999998666544
No 210
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=89.54 E-value=3.9 Score=30.96 Aligned_cols=22 Identities=23% Similarity=0.372 Sum_probs=8.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhhh
Q 006645 530 LSKEKLQSIQLKQDLTEAESQN 551 (637)
Q Consensus 530 ~~e~~~~~~~l~~~l~e~e~~~ 551 (637)
+++.+..++.|+++|...+.++
T Consensus 9 Lq~~E~~N~~Le~~v~~le~~L 30 (72)
T 3cve_A 9 LQEVEIRNKDLEGQLSEMEQRL 30 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHH
Confidence 3333333444444444444333
No 211
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=89.41 E-value=2.1 Score=34.47 Aligned_cols=28 Identities=25% Similarity=0.419 Sum_probs=13.0
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHh
Q 006645 522 EKEELESSLSKEKLQSIQLKQDLTEAES 549 (637)
Q Consensus 522 ~~~~le~~~~e~~~~~~~l~~~l~e~e~ 549 (637)
..++||+++...++++..-.|+|.++++
T Consensus 36 ~ieeLQ~Ei~~~E~QL~iArQKLkdAe~ 63 (107)
T 2k48_A 36 TLQELQENITAHEQQLVTARQKLKDAEK 63 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555544444444444444444443
No 212
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=89.38 E-value=8.7 Score=32.18 Aligned_cols=19 Identities=32% Similarity=0.578 Sum_probs=8.2
Q ss_pred HHhHHHHHHHHhhhhhHHH
Q 006645 516 IATLKAEKEELESSLSKEK 534 (637)
Q Consensus 516 ~~~l~~~~~~le~~~~e~~ 534 (637)
+..|+...+.++.++.+.+
T Consensus 13 ia~L~~D~~s~~~eleEnq 31 (167)
T 4gkw_A 13 VADLKQDTESLQKQLEENQ 31 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444433
No 213
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=89.36 E-value=0.71 Score=47.76 Aligned_cols=70 Identities=21% Similarity=0.197 Sum_probs=52.7
Q ss_pred ccCCCChHHHHHHhhhheeeeeCCCCCCC--CCCCCHh------------hhHHHHHHhcCCCCCHHHHHHHHHHHHHHh
Q 006645 36 LTSKFSNDSALLLYALYQQATVGPCNVPK--PSSWSPV------------EQSKWKSWQGLGNMATTEAMRLFVKILEEE 101 (637)
Q Consensus 36 ~~~~~~~~~~l~ly~l~kqa~~g~~~~~~--p~~~~~~------------~~~k~~aw~~~~~~s~~~a~~~yv~~~~~~ 101 (637)
+.-..+.++.++|=||.-||..||++... ++.+++. .+.=-.+|+++.|||+++|+.+|++++.++
T Consensus 197 G~~~c~~e~a~~LAAl~~qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~e~~I~~~~~~~~g~s~~eA~~~yL~~~~~l 276 (371)
T 3ivf_A 197 GSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMSEIEAKVRYVKLARSL 276 (371)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHS
T ss_pred ceeecCHHHHHHHHHHHHHHHhCCCChhhcccchhcccccCCHHHhCchHHHHHHHHHHHccCCCHHHHHHHHHHHHhcc
Confidence 44578899999999999999999998653 3332211 122246799999999999999999999875
Q ss_pred CCCcc
Q 006645 102 DPGWY 106 (637)
Q Consensus 102 ~~~~~ 106 (637)
|.|.
T Consensus 277 -~~yG 280 (371)
T 3ivf_A 277 -KTYG 280 (371)
T ss_dssp -TTTT
T ss_pred -cccC
Confidence 5543
No 214
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=89.20 E-value=3.6 Score=33.20 Aligned_cols=12 Identities=42% Similarity=0.769 Sum_probs=4.7
Q ss_pred hHHHHHHHHHHH
Q 006645 575 LEVDVAELRQKL 586 (637)
Q Consensus 575 le~~~~el~~~l 586 (637)
+|.++++|+++|
T Consensus 87 lq~KiaeLKrqL 98 (107)
T 2k48_A 87 LETKLGELKRQL 98 (107)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333344443333
No 215
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=89.11 E-value=5.4 Score=43.99 Aligned_cols=154 Identities=14% Similarity=0.034 Sum_probs=82.4
Q ss_pred cCcEEEEEccC------CeEEEee-ecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCC--CCcceeEEEEECC
Q 006645 210 LSDMHILDLRS------WAWSKIQ-AKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKD--PSEIIQVKVFDLQ 280 (637)
Q Consensus 210 ~~~v~~yd~~t------~~W~~~~-~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~--~~~~~~v~~yd~~ 280 (637)
..+++++|+.+ .....+. .. ..........-+++.+++...... .-....++++|+.
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~--------------~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~ 225 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDA--------------HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVT 225 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSC--------------SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEEC
T ss_pred eeEEEEEECCCCccccCCceeEEEecC--------------CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEEC
Confidence 46799999988 6665553 11 111111122235554444443322 1124689999998
Q ss_pred -CC---ceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCC-CCccc---c
Q 006645 281 -TC---SWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVP-PSPRS---D 350 (637)
Q Consensus 281 -t~---~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~-p~~r~---~ 350 (637)
++ ....+... . ......... ++++|+.+..++ ...||++|+.+..+..+...... -.|.+ .
T Consensus 226 ~~g~~~~~~~l~~~---~--~~~~~~~~~spdg~l~~~~~~~~----~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~ 296 (662)
T 3azo_A 226 EDGRFADTRTLLGG---P--EEAIAQAEWAPDGSLIVATDRTG----WWNLHRVDPATGAATQLCRREEEFAGPLWTPGM 296 (662)
T ss_dssp TTSCEEEEEEEEEE---T--TBCEEEEEECTTSCEEEEECTTS----SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTC
T ss_pred CCCcccccEEeCCC---C--CceEcceEECCCCeEEEEECCCC----CeEEEEEECCCCceeecccccccccCccccccC
Confidence 57 44444221 0 111122222 567776665432 24799999988899887532110 01111 1
Q ss_pred cEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecc
Q 006645 351 HAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPT 390 (637)
Q Consensus 351 h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~ 390 (637)
.+.+...++.+++.+.. ....+|.+|+.+.....+.
T Consensus 297 ~~~~~~~~~~~~~~~~~----~~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 297 RWFAPLANGLIAVVHGK----GAAVLGILDPESGELVDAA 332 (662)
T ss_dssp CSEEECTTSCEEEEEBS----SSCEEEEEETTTTEEEECC
T ss_pred ceEeEeCCCEEEEEEEc----CccEEEEEECCCCcEEEec
Confidence 23444446667766653 2356889999888877664
No 216
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=89.08 E-value=0.73 Score=46.79 Aligned_cols=109 Identities=10% Similarity=0.127 Sum_probs=54.6
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLET 332 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t 332 (637)
++.+++.|+.+. .+.+||+.++.|..+.. .........++.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 22 ~g~~l~~~~~d~------~i~iw~~~~~~~~~~~~---~~~h~~~v~~~~~s~~~~~l~s~s~d------~~v~vwd~~~ 86 (377)
T 3dwl_C 22 QRTEFVTTTATN------QVELYEQDGNGWKHART---FSDHDKIVTCVDWAPKSNRIVTCSQD------RNAYVYEKRP 86 (377)
T ss_dssp SSSEEECCCSSS------CBCEEEEETTEEEECCC---BCCCSSCEEEEEECTTTCCEEEEETT------SSEEEC----
T ss_pred CCCEEEEecCCC------EEEEEEccCCceEEEEE---EecCCceEEEEEEeCCCCEEEEEeCC------CeEEEEEcCC
Confidence 566677776543 47788888888777654 2222222333333 45677777753 3588899887
Q ss_pred Cc-eEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 333 MT-WDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 333 ~~-W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
.. |....... .....-.+++...++.+++.|+.+ ..+.+||+.+..
T Consensus 87 ~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~ 133 (377)
T 3dwl_C 87 DGTWKQTLVLL--RLNRAATFVRWSPNEDKFAVGSGA-----RVISVCYFEQEN 133 (377)
T ss_dssp --CCCCEEECC--CCSSCEEEEECCTTSSCCEEEESS-----SCEEECCC----
T ss_pred CCceeeeeEec--ccCCceEEEEECCCCCEEEEEecC-----CeEEEEEECCcc
Confidence 76 44332221 111222233333455577777654 347788887654
No 217
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=89.02 E-value=14 Score=37.09 Aligned_cols=111 Identities=10% Similarity=0.059 Sum_probs=64.3
Q ss_pred EEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEE-E--CCEEEEEeCCCCCCCCCCceEEEECCCC
Q 006645 257 KLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTL-V--GTSLVIFGGEDAKRSLLNDLHILDLETM 333 (637)
Q Consensus 257 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~-~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~ 333 (637)
.+++.|+.++ .+.+||+.+......... ........++. . ++.+++.|+.+ ..+.+||+.+.
T Consensus 87 ~~l~s~~~dg------~i~iwd~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~ 151 (383)
T 3ei3_B 87 TTVAVGSKGG------DIILWDYDVQNKTSFIQG---MGPGDAITGMKFNQFNTNQLFVSSIR------GATTLRDFSGS 151 (383)
T ss_dssp TEEEEEEBTS------CEEEEETTSTTCEEEECC---CSTTCBEEEEEEETTEEEEEEEEETT------TEEEEEETTSC
T ss_pred CEEEEEcCCC------eEEEEeCCCcccceeeec---CCcCCceeEEEeCCCCCCEEEEEeCC------CEEEEEECCCC
Confidence 5777777644 488999988876655331 11122222333 3 34677777653 45889999987
Q ss_pred ceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEec
Q 006645 334 TWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 334 ~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l 389 (637)
....+.... .....-.+++...++.+++.|+.+ ..+.+||+....-..+
T Consensus 152 ~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~ 200 (383)
T 3ei3_B 152 VIQVFAKTD--SWDYWYCCVDVSVSRQMLATGDST-----GRLLLLGLDGHEIFKE 200 (383)
T ss_dssp EEEEEECCC--CSSCCEEEEEEETTTTEEEEEETT-----SEEEEEETTSCEEEEE
T ss_pred ceEEEeccC--CCCCCeEEEEECCCCCEEEEECCC-----CCEEEEECCCCEEEEe
Confidence 776664321 111222344444556677777754 4688999865544443
No 218
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=89.01 E-value=1.3 Score=35.50 Aligned_cols=42 Identities=24% Similarity=0.356 Sum_probs=30.5
Q ss_pred hhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006645 573 FKLEVDVAELRQKLQTMETLQKELELLQRQKAASEQAALNAK 614 (637)
Q Consensus 573 ~~le~~~~el~~~lq~~q~~~~e~~~~~~~~~~~~~~~~~~~ 614 (637)
..|+.|+.+|.++++.++..+++.-.++..-.-++.+|...+
T Consensus 50 ~eL~~EI~~L~~eI~~LE~iqs~aK~LRnKA~~L~~eLe~F~ 91 (96)
T 1t3j_A 50 KHLEEEIARLSKEIDQLEKMQNNSKLLRNKAVQLESELENFS 91 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 456677777888888888888888777766666777776554
No 219
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=88.94 E-value=20 Score=35.84 Aligned_cols=148 Identities=11% Similarity=0.056 Sum_probs=76.8
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE----CCEEEEEeCCCCCCCCCCceEEEEC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV----GTSLVIFGGEDAKRSLLNDLHILDL 330 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~n~i~~yd~ 330 (637)
++..++.|+.+. .+.++|+.+++-...-. + ......+..+ ++.+++.|+.+ ..+.+||+
T Consensus 165 ~~~~l~t~s~D~------~v~lwd~~~~~~~~~~~-~----h~~~v~~~~~~~~~~g~~l~sgs~D------g~v~~wd~ 227 (354)
T 2pbi_B 165 SDMQILTASGDG------TCALWDVESGQLLQSFH-G----HGADVLCLDLAPSETGNTFVSGGCD------KKAMVWDM 227 (354)
T ss_dssp SSSEEEEEETTS------EEEEEETTTCCEEEEEE-C----CSSCEEEEEECCCSSCCEEEEEETT------SCEEEEET
T ss_pred CCCEEEEEeCCC------cEEEEeCCCCeEEEEEc-C----CCCCeEEEEEEeCCCCCEEEEEeCC------CeEEEEEC
Confidence 344555555432 58889988876543321 0 0111122222 34677888764 35889999
Q ss_pred CCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecccCCCCCCCCcccEEEEECCc
Q 006645 331 ETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPTQQGEIPTPRAGHAGVTIGEN 410 (637)
Q Consensus 331 ~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~~~~~~p~~R~~hs~~~~~~~ 410 (637)
.+.+....-.. ....-.+++...++.+++.|+.+ ..+.+||+.+..-..+-. .........++.+.
T Consensus 228 ~~~~~~~~~~~----h~~~v~~v~~~p~~~~l~s~s~D-----~~v~lwd~~~~~~~~~~~---~~~~~~~~~~~~~s-- 293 (354)
T 2pbi_B 228 RSGQCVQAFET----HESDVNSVRYYPSGDAFASGSDD-----ATCRLYDLRADREVAIYS---KESIIFGASSVDFS-- 293 (354)
T ss_dssp TTCCEEEEECC----CSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEEC---CTTCCSCEEEEEEC--
T ss_pred CCCcEEEEecC----CCCCeEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEEEc---CCCcccceeEEEEe--
Confidence 88765443211 11112233444455577777754 347889988764332211 11111222233322
Q ss_pred cccceeeeeeccCCCCEEEEEcCCCCCCcccEEEEeCCCC
Q 006645 411 WFLGLSLVVSSYSGEDVIVAFGGYNGRYNNEVHVLKPSHK 450 (637)
Q Consensus 411 ~yiG~s~~~~~~~g~~~l~v~GG~~~~~~~~v~~~d~~~~ 450 (637)
.++ .+++.|+.++ .+.+||+.+.
T Consensus 294 -----------~~g--~~l~~g~~d~----~i~vwd~~~~ 316 (354)
T 2pbi_B 294 -----------LSG--RLLFAGYNDY----TINVWDVLKG 316 (354)
T ss_dssp -----------TTS--SEEEEEETTS----CEEEEETTTC
T ss_pred -----------CCC--CEEEEEECCC----cEEEEECCCC
Confidence 122 6777777553 5788887554
No 220
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=88.72 E-value=13 Score=41.15 Aligned_cols=149 Identities=14% Similarity=0.111 Sum_probs=77.1
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~ 272 (637)
++.+++.||.+ ..+.++|+.+..-...-.. .... -.++.+ ++..++.|+.+.
T Consensus 441 ~g~~l~sgs~D-----g~v~vwd~~~~~~~~~~~~-------------h~~~--v~~~~~s~~~~~l~s~s~D~------ 494 (694)
T 3dm0_A 441 DGQFALSGSWD-----GELRLWDLAAGVSTRRFVG-------------HTKD--VLSVAFSLDNRQIVSASRDR------ 494 (694)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEEC-------------CSSC--EEEEEECTTSSCEEEEETTS------
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCcceeEEeC-------------CCCC--EEEEEEeCCCCEEEEEeCCC------
Confidence 45666777643 3588899888754322110 1111 122222 566667777654
Q ss_pred eEEEEECCCCceEeeccCCCCCCCCCceEEEEEC--C--EEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcc
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVG--T--SLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPR 348 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~--~--~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r 348 (637)
.|.++|+....-..+... ....+....++.+. + .+++.|+.+ +.|.+||+.+..-...-.. ...
T Consensus 495 ~i~iwd~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~l~s~s~d------~~v~vwd~~~~~~~~~~~~----h~~ 562 (694)
T 3dm0_A 495 TIKLWNTLGECKYTISEG--GEGHRDWVSCVRFSPNTLQPTIVSASWD------KTVKVWNLSNCKLRSTLAG----HTG 562 (694)
T ss_dssp CEEEECTTSCEEEEECSS--TTSCSSCEEEEEECSCSSSCEEEEEETT------SCEEEEETTTCCEEEEECC----CSS
T ss_pred EEEEEECCCCcceeeccC--CCCCCCcEEEEEEeCCCCcceEEEEeCC------CeEEEEECCCCcEEEEEcC----CCC
Confidence 477788655432222221 11112223333332 2 466666653 4588999987664432111 111
Q ss_pred cccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCee
Q 006645 349 SDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEW 386 (637)
Q Consensus 349 ~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W 386 (637)
.-.++++..++.+++.||.+ ..|.++|+.+..-
T Consensus 563 ~v~~v~~spdg~~l~sg~~D-----g~i~iwd~~~~~~ 595 (694)
T 3dm0_A 563 YVSTVAVSPDGSLCASGGKD-----GVVLLWDLAEGKK 595 (694)
T ss_dssp CEEEEEECTTSSEEEEEETT-----SBCEEEETTTTEE
T ss_pred CEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCce
Confidence 12234444566678888754 3578899887753
No 221
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=88.64 E-value=12 Score=37.83 Aligned_cols=111 Identities=9% Similarity=0.067 Sum_probs=58.3
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCC--CCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEEC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKP--PVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDL 330 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~--p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~ 330 (637)
++..++.|+.+. .+.+||+.++.-...-..... ........++.+ ++.+++.|+.+ ..+.+||+
T Consensus 260 ~~~~l~s~s~D~------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d------g~i~vwd~ 327 (380)
T 3iz6_a 260 DGQRFGTGSDDG------TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN------GDCYVWDT 327 (380)
T ss_dssp TSSEEEEECSSS------CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT------SCEEEEET
T ss_pred CCCeEEEEcCCC------eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC------CCEEEEEC
Confidence 567778887654 488899988764433211000 011111222333 56777777653 45899998
Q ss_pred CCCceEE-ecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCC
Q 006645 331 ETMTWDE-IDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQT 383 (637)
Q Consensus 331 ~t~~W~~-~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t 383 (637)
.+..-.. +.... ......-.++++..++.+++.||.++ .+.++++..
T Consensus 328 ~~~~~~~~~~~~~-~~h~~~v~~l~~s~dg~~l~sgs~D~-----~i~iW~~~~ 375 (380)
T 3iz6_a 328 LLAEMVLNLGTLQ-NSHEGRISCLGLSSDGSALCTGSWDK-----NLKIWAFSG 375 (380)
T ss_dssp TTCCEEEEECCSC-SSCCCCCCEEEECSSSSEEEEECTTS-----CEEEEECCS
T ss_pred CCCceEEEEeccc-CCCCCceEEEEECCCCCEEEEeeCCC-----CEEEEecCC
Confidence 7765433 21110 01111122344445666788888653 466776654
No 222
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=88.56 E-value=30 Score=38.46 Aligned_cols=81 Identities=19% Similarity=0.176 Sum_probs=48.1
Q ss_pred eEEEECCEEEEEcccCCCcccCcEEEEEccCC--eEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCC
Q 006645 190 GAAVVQDKMYIYGGNHNGRYLSDMHILDLRSW--AWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKD 267 (637)
Q Consensus 190 a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~ 267 (637)
+.++.+++||+... ...++.+|..|+ .|+.-.... ........+-+..++.||+-.+...
T Consensus 112 ~~~~~~~~v~v~~~------dg~l~alD~~tG~~~W~~~~~~~-----------~~~~~~~~~P~v~~~~v~vg~~~~~- 173 (668)
T 1kv9_A 112 GVALWGDKVYVGTL------DGRLIALDAKTGKAIWSQQTTDP-----------AKPYSITGAPRVVKGKVIIGNGGAE- 173 (668)
T ss_dssp CCEEEBTEEEEECT------TSEEEEEETTTCCEEEEEECSCT-----------TSSCBCCSCCEEETTEEEECCBCTT-
T ss_pred ceEEECCEEEEEcC------CCEEEEEECCCCCEeeeeccCCC-----------CCcceecCCCEEECCEEEEeCCCCC-
Confidence 45667899988653 246999999886 487642210 0111222233456888877433211
Q ss_pred CCcceeEEEEECCCCc--eEeec
Q 006645 268 PSEIIQVKVFDLQTCS--WSTLK 288 (637)
Q Consensus 268 ~~~~~~v~~yd~~t~~--W~~~~ 288 (637)
......++.||+.|++ |+.-.
T Consensus 174 ~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 174 YGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp TCCBCEEEEEETTTCCEEEEEES
T ss_pred cCCCCEEEEEECCCCcEEEEecc
Confidence 1234579999998865 87653
No 223
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=88.32 E-value=25 Score=38.26 Aligned_cols=125 Identities=15% Similarity=0.145 Sum_probs=64.5
Q ss_pred CC-EEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCC--------CCCCCceEEEEECCEEEEEeCCCCCCCCCCce
Q 006645 255 EN-KLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKP--------PVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDL 325 (637)
Q Consensus 255 ~~-~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~--------p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i 325 (637)
++ ++|+..-. .+.+.+||..+.+=...-+.+.+ |.+|.........+..+++--. ..+.+
T Consensus 254 DGk~l~v~n~~------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~-----~~g~v 322 (567)
T 1qks_A 254 EDKYAIAGAYW------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK-----ETGKI 322 (567)
T ss_dssp TTTEEEEEEEE------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET-----TTTEE
T ss_pred CCCEEEEEEcc------CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec-----CCCeE
Confidence 44 66665432 24688899887664443222211 2223222222222233332211 24678
Q ss_pred EEEECCCCceEEecCCCCCCCcccccEEEEEcCC-EEEEEeCCCCCCCcCcEEEEECCCCeeEecccC-CCCCCC
Q 006645 326 HILDLETMTWDEIDAVGVPPSPRSDHAAAVHAER-YLLIFGGGSHAACFNDLHVLDLQTMEWSRPTQQ-GEIPTP 398 (637)
Q Consensus 326 ~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~-~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~~~-~~~p~~ 398 (637)
++.|..+.....+... +..+.-|...+..++ ++|+.... .+.|.++|..+++-...... +..|.|
T Consensus 323 ~~vd~~~~~~~~v~~i---~~~~~~~d~~~~pdgr~~~va~~~-----sn~V~ViD~~t~kl~~~i~vgg~~Php 389 (567)
T 1qks_A 323 LLVDYTDLNNLKTTEI---SAERFLHDGGLDGSHRYFITAANA-----RNKLVVIDTKEGKLVAIEDTGGQTPHP 389 (567)
T ss_dssp EEEETTCSSEEEEEEE---ECCSSEEEEEECTTSCEEEEEEGG-----GTEEEEEETTTTEEEEEEECSSSSBCC
T ss_pred EEEecCCCccceeeee---eccccccCceECCCCCEEEEEeCC-----CCeEEEEECCCCcEEEEEeccCcCCCC
Confidence 9999887665444332 345566666665444 45554432 46799999998875433223 444444
No 224
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=88.29 E-value=3.8 Score=32.61 Aligned_cols=14 Identities=7% Similarity=0.026 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHHHh
Q 006645 601 RQKAASEQAALNAK 614 (637)
Q Consensus 601 ~~~~~~~~~~~~~~ 614 (637)
+++.++..++...+
T Consensus 68 ~eKe~L~~ql~~lq 81 (94)
T 3jsv_C 68 EKKEYLQEQLEQLQ 81 (94)
T ss_dssp HTTSHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH
Confidence 33444444443333
No 225
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=88.26 E-value=26 Score=36.25 Aligned_cols=65 Identities=14% Similarity=0.175 Sum_probs=38.5
Q ss_pred CEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE-CCEEEEEeCCCCCCCCCCceEEEECCCCc
Q 006645 256 NKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GTSLVIFGGEDAKRSLLNDLHILDLETMT 334 (637)
Q Consensus 256 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~n~i~~yd~~t~~ 334 (637)
+.+++.|+.+. .|.+||+.+......-..+ . .....++.+ ++.+++.|+.+ +.|.+||+.+.+
T Consensus 210 ~~~l~s~~~d~------~i~vwd~~~~~~~~~~~~~--h--~~~v~~~~~sd~~~l~s~~~d------~~v~vwd~~~~~ 273 (450)
T 2vdu_B 210 HQFIITSDRDE------HIKISHYPQCFIVDKWLFG--H--KHFVSSICCGKDYLLLSAGGD------DKIFAWDWKTGK 273 (450)
T ss_dssp CEEEEEEETTS------CEEEEEESCTTCEEEECCC--C--SSCEEEEEECSTTEEEEEESS------SEEEEEETTTCC
T ss_pred CcEEEEEcCCC------cEEEEECCCCceeeeeecC--C--CCceEEEEECCCCEEEEEeCC------CeEEEEECCCCc
Confidence 77888887653 5888998776644321111 1 111122222 67777777743 468999998876
Q ss_pred eE
Q 006645 335 WD 336 (637)
Q Consensus 335 W~ 336 (637)
..
T Consensus 274 ~~ 275 (450)
T 2vdu_B 274 NL 275 (450)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 226
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=88.18 E-value=2.5 Score=38.24 Aligned_cols=32 Identities=9% Similarity=0.070 Sum_probs=8.0
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHH
Q 006645 522 EKEELESSLSKEKLQSIQLKQDLTEAESQNTD 553 (637)
Q Consensus 522 ~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~ 553 (637)
+++.+++++.....-++.|+.++..+.+++..
T Consensus 7 YK~~~q~ql~~ad~LV~~L~~En~~L~~ql~~ 38 (190)
T 4emc_A 7 YKNSVKQQIDSADLLVANLVNENFVLSEKLDT 38 (190)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444444444433333333
No 227
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=88.17 E-value=17 Score=34.10 Aligned_cols=157 Identities=15% Similarity=0.131 Sum_probs=79.4
Q ss_pred eeEEEECCEEEEEcccCCCcccCcEEEEEccCCe-EEEeeecccccCCCCCCCCCCCCcccceEEE-eCCEEEEEEccCC
Q 006645 189 HGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSWA-WSKIQAKAVAESTESPSPALLTPCAGHSLIP-WENKLLSIAGHTK 266 (637)
Q Consensus 189 ~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~-W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~-~~~~lyv~GG~~~ 266 (637)
-|++.+.+++|+|=| +.+|+++..... ........ .. +.+| .....+... .++++|+|-|.
T Consensus 34 DAi~~~~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~----~w---p~lp-~~IDAA~~~~~~~k~yfFkG~-- 96 (218)
T 1gen_A 34 DGIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVAT----FW---PELP-EKIDAVYEAPQEEKAVFFAGN-- 96 (218)
T ss_dssp SEEEEETTEEEEEET-------TEEEEESSTTSCCEEEEEGGG----TC---TTSC-SCCSEEEEETTTTEEEEEETT--
T ss_pred eEEEeCCCcEEEEEC-------CEEEEEeCCCCccCCCEEHHH----hc---CCCC-CCccEEEEECCCCEEEEEeCC--
Confidence 455667899999987 456776654422 11111110 00 1122 222222222 26899999874
Q ss_pred CCCcceeEEEEECCCCce---EeeccCCCCCCC-CCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEE---
Q 006645 267 DPSEIIQVKVFDLQTCSW---STLKTYGKPPVS-RGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDE--- 337 (637)
Q Consensus 267 ~~~~~~~v~~yd~~t~~W---~~~~~~g~~p~~-r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~--- 337 (637)
..|+||..+..- ..+...| .|.. ..--++... ++++|+|-| +..|+||..+.+-..
T Consensus 97 ------~yW~y~~~~~~~gyPk~I~~~g-~p~~~~~IDAAf~~~~~g~~YfFkG--------~~ywr~d~~~~~v~~gyP 161 (218)
T 1gen_A 97 ------EYWIYSASTLERGYPKPLTSLG-LPPDVQRVDAAFNWSKNKKTYIFAG--------DKFWRYNEVKKKMDPGFP 161 (218)
T ss_dssp ------EEEEEETTEECTTCSEEGGGGT-CCTTCCCCSEEEEETTTTEEEEEET--------TEEEEEETTTTEECSSCC
T ss_pred ------EEEEEcCccccCCCCccHhhcC-CCCCcCCccEEEEEcCCCeEEEEEC--------CEEEEEECccccccCCCC
Confidence 578888532110 1111112 2221 122233333 579999976 358899987653211
Q ss_pred --ecCCCCCCCcccccEEEEEc-CCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 338 --IDAVGVPPSPRSDHAAAVHA-ERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 338 --~~~~~~~p~~r~~h~~~~~~-~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
+... -+..|..-.++.... ++.+|+|-|. ..|.||..+..
T Consensus 162 r~i~~~-w~g~p~~idaAf~~~~~g~~YfFkg~-------~y~~~~~~~~~ 204 (218)
T 1gen_A 162 KLIADA-WNAIPDNLDAVVDLQGGGHSYFFKGA-------YYLKLENQSLK 204 (218)
T ss_dssp EEHHHH-SSSCCSSCSEEEECTTTCEEEEEETT-------EEEEEETTEEE
T ss_pred cchhhc-cCCCCCCCCEEEEEcCCCcEEEEECC-------EEEEEECCcee
Confidence 1100 011122334555443 4789999874 57888876544
No 228
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=88.14 E-value=15 Score=36.26 Aligned_cols=169 Identities=8% Similarity=-0.078 Sum_probs=87.8
Q ss_pred eeEEEE--CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEE-e-CCEEEEEEcc
Q 006645 189 HGAAVV--QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIP-W-ENKLLSIAGH 264 (637)
Q Consensus 189 ~a~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~-~-~~~lyv~GG~ 264 (637)
++++.. ++.|||.... ..+.+||+.++..+.+.... ...+..+ -..++. - ++.||+.-..
T Consensus 83 ~gi~~~~~~g~l~v~d~~------~~i~~~d~~~g~~~~~~~~~---------~~~~~~~-p~~i~~d~~~G~l~v~d~~ 146 (322)
T 2fp8_A 83 YDISYNLQNNQLYIVDCY------YHLSVVGSEGGHATQLATSV---------DGVPFKW-LYAVTVDQRTGIVYFTDVS 146 (322)
T ss_dssp EEEEEETTTTEEEEEETT------TEEEEECTTCEECEEEESEE---------TTEECSC-EEEEEECTTTCCEEEEESC
T ss_pred ceEEEcCCCCcEEEEECC------CCEEEEeCCCCEEEEecccC---------CCCcccc-cceEEEecCCCEEEEECCc
Confidence 455555 5789997431 23889998887666553321 0001111 122333 2 5688886432
Q ss_pred CCC-----------CCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE-C-CEEEEEeCCCCCCCCCCceEEEECC
Q 006645 265 TKD-----------PSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-G-TSLVIFGGEDAKRSLLNDLHILDLE 331 (637)
Q Consensus 265 ~~~-----------~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~n~i~~yd~~ 331 (637)
... ......+++||+.+.....+... ... ...++.. + +.||+.-.. .+.|++|++.
T Consensus 147 ~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~--~~~---p~gia~~~dg~~lyv~d~~------~~~I~~~~~~ 215 (322)
T 2fp8_A 147 TLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE--LHV---PGGAEVSADSSFVLVAEFL------SHQIVKYWLE 215 (322)
T ss_dssp SSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE--ESC---CCEEEECTTSSEEEEEEGG------GTEEEEEESS
T ss_pred ccccccccceehcccCCCceEEEEeCCCCEEEEeccC--Ccc---CcceEECCCCCEEEEEeCC------CCeEEEEECC
Confidence 100 01236799999988876554321 111 1223333 3 357876432 3579999987
Q ss_pred CC---ceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCC-----CCcCcEEEEECCCCeeEecc
Q 006645 332 TM---TWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHA-----ACFNDLHVLDLQTMEWSRPT 390 (637)
Q Consensus 332 t~---~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~-----~~~~dl~~~d~~t~~W~~l~ 390 (637)
+. ....+.. .+. -..+++..++.|||....... .....+.+||+....-..+.
T Consensus 216 ~~~~~~~~~~~~---~~g---P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~ 276 (322)
T 2fp8_A 216 GPKKGTAEVLVK---IPN---PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIP 276 (322)
T ss_dssp STTTTCEEEEEE---CSS---EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEE
T ss_pred CCcCCccceEEe---CCC---CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEE
Confidence 52 3443321 121 234555556668887532110 01245899998765554443
No 229
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=88.14 E-value=6.5 Score=33.18 Aligned_cols=50 Identities=24% Similarity=0.333 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhHHH-HHHHHHHHHHH
Q 006645 553 DLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQTMET-LQKELELLQRQ 602 (637)
Q Consensus 553 ~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~~q~-~~~e~~~~~~~ 602 (637)
.++.++...+..+...--.--.||.+++-|++.|.=+.. -++|+.++|.|
T Consensus 66 ~~E~di~~lrK~lD~~~l~r~dLE~~iesL~eEl~FLKk~heeEl~eLq~q 116 (119)
T 3ol1_A 66 EAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQELQAQ 116 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444432222223566666666655554442 24455555543
No 230
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=88.12 E-value=10 Score=32.46 Aligned_cols=13 Identities=23% Similarity=0.084 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHHH
Q 006645 598 LLQRQKAASEQAA 610 (637)
Q Consensus 598 ~~~~~~~~~~~~~ 610 (637)
.|..=|-.++.++
T Consensus 107 ~LlnvKl~Ld~EI 119 (129)
T 3tnu_B 107 ELMNTKLALDVEI 119 (129)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333444555444
No 231
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=88.08 E-value=20 Score=34.81 Aligned_cols=102 Identities=21% Similarity=0.213 Sum_probs=54.5
Q ss_pred EEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCc
Q 006645 257 KLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMT 334 (637)
Q Consensus 257 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~ 334 (637)
.+++.||.+. .+.+||+.+......-. .......++.+ ++.+++.|+.+ ..+.+||+.+..
T Consensus 186 ~~~~s~~~d~------~i~i~d~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~s~D------g~i~iwd~~~~~ 248 (340)
T 4aow_A 186 PIIVSCGWDK------LVKVWNLANCKLKTNHI-----GHTGYLNTVTVSPDGSLCASGGKD------GQAMLWDLNEGK 248 (340)
T ss_dssp CEEEEEETTS------CEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETT------CEEEEEETTTTE
T ss_pred cEEEEEcCCC------EEEEEECCCCceeeEec-----CCCCcEEEEEECCCCCEEEEEeCC------CeEEEEEeccCc
Confidence 4566666543 47889988876544322 11112223333 46777778754 358889987765
Q ss_pred eEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCee
Q 006645 335 WDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEW 386 (637)
Q Consensus 335 W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W 386 (637)
-...... ...-.+++...++ .++.|+.+ ..+.+||+.+..-
T Consensus 249 ~~~~~~~-----~~~v~~~~~~~~~-~~~~~~~d-----~~i~iwd~~~~~~ 289 (340)
T 4aow_A 249 HLYTLDG-----GDIINALCFSPNR-YWLCAATG-----PSIKIWDLEGKII 289 (340)
T ss_dssp EEEEEEC-----SSCEEEEEECSSS-SEEEEEET-----TEEEEEETTTTEE
T ss_pred eeeeecC-----CceEEeeecCCCC-ceeeccCC-----CEEEEEECCCCeE
Confidence 4332211 1112233333445 44455533 3578889887654
No 232
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=88.04 E-value=15 Score=36.01 Aligned_cols=145 Identities=10% Similarity=0.065 Sum_probs=73.2
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEE---EeCCEEEEEEccCCCCCcc
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLI---PWENKLLSIAGHTKDPSEI 271 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v---~~~~~lyv~GG~~~~~~~~ 271 (637)
++.+++.|+.+ ..+.+||+.+.....+... .... .++. .-++.+++.|+.++
T Consensus 97 ~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~--------------~~~v-~~~~~~~~~~~~~l~~~~~dg----- 151 (368)
T 3mmy_A 97 DGSKVFTASCD-----KTAKMWDLSSNQAIQIAQH--------------DAPV-KTIHWIKAPNYSCVMTGSWDK----- 151 (368)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEEC--------------SSCE-EEEEEEECSSCEEEEEEETTS-----
T ss_pred CCCEEEEEcCC-----CcEEEEEcCCCCceeeccc--------------cCce-EEEEEEeCCCCCEEEEccCCC-----
Confidence 45566666632 3688999999876654321 1111 1222 22567788887643
Q ss_pred eeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCccccc
Q 006645 272 IQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDH 351 (637)
Q Consensus 272 ~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h 351 (637)
.+.+||+.+..-...-. ......+.....+.+++.++ .+.+.+||+....-...... .+......
T Consensus 152 -~i~vwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~~~~~~--~~~~~~~~ 216 (368)
T 3mmy_A 152 -TLKFWDTRSSNPMMVLQ-----LPERCYCADVIYPMAVVATA-------ERGLIVYQLENQPSEFRRIE--SPLKHQHR 216 (368)
T ss_dssp -EEEEECSSCSSCSEEEE-----CSSCEEEEEEETTEEEEEEG-------GGCEEEEECSSSCEEEEECC--CSCSSCEE
T ss_pred -cEEEEECCCCcEEEEEe-----cCCCceEEEecCCeeEEEeC-------CCcEEEEEeccccchhhhcc--ccccCCCc
Confidence 58899988765332211 11223333444555554443 24588888876542222111 11112222
Q ss_pred EEEEEcC----CEEEEEeCCCCCCCcCcEEEEECCCC
Q 006645 352 AAAVHAE----RYLLIFGGGSHAACFNDLHVLDLQTM 384 (637)
Q Consensus 352 ~~~~~~~----~~l~v~GG~~~~~~~~dl~~~d~~t~ 384 (637)
...+..+ ...++.|+.+ ..+.+||+...
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~d-----g~i~i~~~~~~ 248 (368)
T 3mmy_A 217 CVAIFKDKQNKPTGFALGSIE-----GRVAIHYINPP 248 (368)
T ss_dssp EEEEEECTTSCEEEEEEEETT-----SEEEEEESSCS
T ss_pred eEEEcccCCCCCCeEEEecCC-----CcEEEEecCCC
Confidence 2222211 1236666643 35778887765
No 233
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=87.93 E-value=12 Score=36.79 Aligned_cols=121 Identities=5% Similarity=-0.090 Sum_probs=67.6
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE-CCEEEEEeCCCCCCCCCCceEEEECCCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GTSLVIFGGEDAKRSLLNDLHILDLETM 333 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~n~i~~yd~~t~ 333 (637)
+++||+.+... ..+++||+.+++...+... ....-++++.. ++++|+.+..+.. ..+.|++||+.+.
T Consensus 55 ~g~l~~~~~~~------~~i~~~d~~~~~~~~~~~~----~~~~~~~i~~~~dg~l~v~~~~~~~--~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 55 QGQLFLLDVFE------GNIFKINPETKEIKRPFVS----HKANPAAIKIHKDGRLFVCYLGDFK--STGGIFAATENGD 122 (333)
T ss_dssp TSCEEEEETTT------CEEEEECTTTCCEEEEEEC----SSSSEEEEEECTTSCEEEEECTTSS--SCCEEEEECTTSC
T ss_pred CCCEEEEECCC------CEEEEEeCCCCcEEEEeeC----CCCCcceEEECCCCcEEEEeCCCCC--CCceEEEEeCCCC
Confidence 56788877542 3689999999888765321 11112223332 5678876543211 1357999999988
Q ss_pred ceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCC-CCCCcCcEEEEECCCCeeEec
Q 006645 334 TWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGS-HAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 334 ~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~-~~~~~~dl~~~d~~t~~W~~l 389 (637)
....+... ......-..+++..++.+|+..... .......|+++|+.+.....+
T Consensus 123 ~~~~~~~~--~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 123 NLQDIIED--LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp SCEEEECS--SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred EEEEEEcc--CccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 76643211 1112222344454566677754321 111234689999887666554
No 234
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=87.87 E-value=19 Score=34.37 Aligned_cols=144 Identities=13% Similarity=0.061 Sum_probs=67.5
Q ss_pred ECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCccee
Q 006645 194 VQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQ 273 (637)
Q Consensus 194 ~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~ 273 (637)
.++.+++.|+.+ ..+.+||+.+..-...... ........+..-++.+++.|+.++ .
T Consensus 27 ~~~~~l~s~~~d-----g~v~vw~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~~~dg------~ 82 (313)
T 3odt_A 27 VDDSKVASVSRD-----GTVRLWSKDDQWLGTVVYT-------------GQGFLNSVCYDSEKELLLFGGKDT------M 82 (313)
T ss_dssp EETTEEEEEETT-----SEEEEEEESSSEEEEEEEE-------------CSSCEEEEEEETTTTEEEEEETTS------C
T ss_pred cCCCEEEEEEcC-----CcEEEEECCCCEEEEEeec-------------CCccEEEEEECCCCCEEEEecCCC------e
Confidence 445556666633 3588899877664443221 111111112222567777777654 3
Q ss_pred EEEEECCCCc-eEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccE
Q 006645 274 VKVFDLQTCS-WSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHA 352 (637)
Q Consensus 274 v~~yd~~t~~-W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~ 352 (637)
+.++++.... ...+.. .........+...++.+++.|+.+ ..+.+||.......... ....-.+
T Consensus 83 i~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~l~~~~~d------~~i~~~d~~~~~~~~~~------~~~~v~~ 147 (313)
T 3odt_A 83 INGVPLFATSGEDPLYT---LIGHQGNVCSLSFQDGVVISGSWD------KTAKVWKEGSLVYNLQA------HNASVWD 147 (313)
T ss_dssp EEEEETTCCTTSCC-CE---ECCCSSCEEEEEEETTEEEEEETT------SEEEEEETTEEEEEEEC------CSSCEEE
T ss_pred EEEEEeeecCCCCcccc---hhhcccCEEEEEecCCEEEEEeCC------CCEEEEcCCcEEEeccc------CCCceeE
Confidence 6677765432 111111 111122223334456666777653 45788883222222211 1111222
Q ss_pred EEEEc-CCEEEEEeCCCCCCCcCcEEEEEC
Q 006645 353 AAVHA-ERYLLIFGGGSHAACFNDLHVLDL 381 (637)
Q Consensus 353 ~~~~~-~~~l~v~GG~~~~~~~~dl~~~d~ 381 (637)
++... ++.+++.|+.+ ..+.+||.
T Consensus 148 ~~~~~~~~~~l~~~~~d-----~~i~i~d~ 172 (313)
T 3odt_A 148 AKVVSFSENKFLTASAD-----KTIKLWQN 172 (313)
T ss_dssp EEEEETTTTEEEEEETT-----SCEEEEET
T ss_pred EEEccCCCCEEEEEECC-----CCEEEEec
Confidence 33332 34466666643 34788883
No 235
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=87.86 E-value=14 Score=32.64 Aligned_cols=35 Identities=17% Similarity=0.280 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHh
Q 006645 554 LYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQT 588 (637)
Q Consensus 554 ~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~ 588 (637)
.+.++.....+|.+.+.|...-++.++.|++.+..
T Consensus 75 yEeqIk~L~~kLKEAE~RAE~AERsv~kLEk~id~ 109 (155)
T 2efr_A 75 YEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDD 109 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444444444444444
No 236
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=87.79 E-value=8.1 Score=33.18 Aligned_cols=12 Identities=33% Similarity=0.202 Sum_probs=5.2
Q ss_pred HHHHHHHHHHHH
Q 006645 599 LQRQKAASEQAA 610 (637)
Q Consensus 599 ~~~~~~~~~~~~ 610 (637)
|..=|-.++.++
T Consensus 110 Ll~vKl~Ld~EI 121 (131)
T 3tnu_A 110 LLDVKTRLEQEI 121 (131)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333344444444
No 237
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=87.78 E-value=9 Score=41.48 Aligned_cols=149 Identities=11% Similarity=0.086 Sum_probs=76.4
Q ss_pred CcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe-CC-EEEEEEccCCCCCcceeEEEEECCCCceEeec
Q 006645 211 SDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW-EN-KLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLK 288 (637)
Q Consensus 211 ~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~-~~-~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 288 (637)
+.++++|..+.+-..+... +.++.-|..+.. ++ ++|+.+.. .+.|.++|+.+++-...-
T Consensus 302 g~i~vvd~~~~~~l~~~~i-------------~~~~~~~~~~~spdg~~l~va~~~------~~~v~v~D~~tg~l~~~i 362 (543)
T 1nir_A 302 GKVLLVNYKDIDNLTVTSI-------------GAAPFLHDGGWDSSHRYFMTAANN------SNKVAVIDSKDRRLSALV 362 (543)
T ss_dssp TEEEEEECTTSSSCEEEEE-------------ECCSSCCCEEECTTSCEEEEEEGG------GTEEEEEETTTTEEEEEE
T ss_pred CeEEEEEecCCCcceeEEe-------------ccCcCccCceECCCCCEEEEEecC------CCeEEEEECCCCeEEEee
Confidence 5788999887542221111 112222223322 44 45555432 347889999998866554
Q ss_pred cCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCC-----ceEEecCCCCCCCcccccEEEEEcC-CE
Q 006645 289 TYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETM-----TWDEIDAVGVPPSPRSDHAAAVHAE-RY 360 (637)
Q Consensus 289 ~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~-----~W~~~~~~~~~p~~r~~h~~~~~~~-~~ 360 (637)
..+..|.+-.+... .. ++.+|+.+... .+.|-++|+.+. .|+.+..... +. .....+....+ ..
T Consensus 363 ~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~-----d~~V~v~d~~~~~~~~~~~~~v~~l~~-~g-~~~~~v~~~pdg~~ 434 (543)
T 1nir_A 363 DVGKTPHPGRGANF-VHPKYGPVWSTSHLG-----DGSISLIGTDPKNHPQYAWKKVAELQG-QG-GGSLFIKTHPKSSH 434 (543)
T ss_dssp ECSSSBCCTTCEEE-EETTTEEEEEEEBSS-----SSEEEEEECCTTTCTTTBTSEEEEEEC-SC-SCCCCEECCTTCCE
T ss_pred ccCCCCCCCCCccc-CCCCCccEEEeccCC-----CceEEEEEeCCCCCchhcCeEEEEEEc-CC-CCceEEEcCCCCCc
Confidence 44555544333332 23 36788776432 246888998772 2766543311 11 11122333333 45
Q ss_pred EEEEeCCCCC-CCcCcEEEEECCCCee
Q 006645 361 LLIFGGGSHA-ACFNDLHVLDLQTMEW 386 (637)
Q Consensus 361 l~v~GG~~~~-~~~~dl~~~d~~t~~W 386 (637)
||+-.-.+.. ...+.|.+||+.+..-
T Consensus 435 l~v~~~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 435 LYVDTTFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp EEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred EEEecCCCCCcccCceEEEEECCCCCC
Confidence 5553211111 1245799999987763
No 238
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=87.77 E-value=11 Score=33.19 Aligned_cols=13 Identities=23% Similarity=0.406 Sum_probs=5.2
Q ss_pred hHHHHHHHHHHHH
Q 006645 575 LEVDVAELRQKLQ 587 (637)
Q Consensus 575 le~~~~el~~~lq 587 (637)
++++...|++++.
T Consensus 113 ~e~r~~~L~~ql~ 125 (154)
T 2ocy_A 113 IEILNKRLTEQLR 125 (154)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3344444444433
No 239
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=87.75 E-value=21 Score=34.56 Aligned_cols=106 Identities=9% Similarity=0.187 Sum_probs=55.6
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe----CCEEEEEEccCCCCCc
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW----ENKLLSIAGHTKDPSE 270 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~----~~~lyv~GG~~~~~~~ 270 (637)
+++.++.||.+ ..+.+||+.+.....+.... ... ..-.++.+ ++.+++.|+.+.
T Consensus 20 ~g~~las~s~D-----~~v~iw~~~~~~~~~~~~l~------------gH~-~~V~~v~~s~~~~g~~l~s~s~D~---- 77 (297)
T 2pm7_B 20 YGKRMATCSSD-----KTIKIFEVEGETHKLIDTLT------------GHE-GPVWRVDWAHPKFGTILASCSYDG---- 77 (297)
T ss_dssp TSSEEEEEETT-----SCEEEEEBCSSCBCCCEEEC------------CCS-SCEEEEEECCGGGCSEEEEEETTT----
T ss_pred CCCEEEEEeCC-----CEEEEEecCCCCcEEEEEEc------------ccc-CCeEEEEecCCCcCCEEEEEcCCC----
Confidence 45666777643 35778888754433332221 000 11122332 256777777654
Q ss_pred ceeEEEEECCCCceEeeccCCCCCCCCCceEEEEEC----CEEEEEeCCCCCCCCCCceEEEECCCC
Q 006645 271 IIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVG----TSLVIFGGEDAKRSLLNDLHILDLETM 333 (637)
Q Consensus 271 ~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~----~~lyv~GG~~~~~~~~n~i~~yd~~t~ 333 (637)
.+.++|+.++.|..+... ........++.+. +.+++.|+.+ +.+.+||+.+.
T Consensus 78 --~v~iWd~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~g~~l~s~s~d------~~v~~wd~~~~ 133 (297)
T 2pm7_B 78 --KVMIWKEENGRWSQIAVH---AVHSASVNSVQWAPHEYGPMLLVASSD------GKVSVVEFKEN 133 (297)
T ss_dssp --EEEEEEBSSSCBCCCEEE---CCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEEBCSS
T ss_pred --EEEEEEcCCCceEEEEEe---ecCCCceeEEEeCcCCCCcEEEEEECC------CcEEEEEecCC
Confidence 588899988877655331 1111122233332 4567777653 35778887654
No 240
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=87.56 E-value=24 Score=36.12 Aligned_cols=54 Identities=13% Similarity=0.028 Sum_probs=29.7
Q ss_pred CceEEEECCCCceEEecCCCCCCCcccccEEEEE-cCCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 323 NDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVH-AERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 323 n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~-~~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
..|.+||+.+..-...... .....+++.. .++.+++.+|... +.|.+||..+..
T Consensus 301 ~~I~iwd~~t~~~~~~~~~-----~~~v~~~~~~~~~~~lv~~sg~~d----~~I~iwd~~~~~ 355 (420)
T 4gga_A 301 RHIRIWNVCSGACLSAVDA-----HSQVCSILWSPHYKELISGHGFAQ----NQLVIWKYPTMA 355 (420)
T ss_dssp CEEEEEETTTTEEEEEEEC-----SSCEEEEEEETTTTEEEEEECTTT----CCEEEEETTTCC
T ss_pred CEEEEEeCCccccceeecc-----ccceeeeeecCCCCeEEEEEecCC----CEEEEEECCCCc
Confidence 3588999988765443221 1111222333 3455666556433 358899987654
No 241
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=87.49 E-value=2.9 Score=41.43 Aligned_cols=115 Identities=11% Similarity=0.057 Sum_probs=60.3
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE-CC-EEEEEeCCCCCCCCCCceEEEECCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GT-SLVIFGGEDAKRSLLNDLHILDLET 332 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~n~i~~yd~~t 332 (637)
++++|+.++.+ +.++++|+.+++....-..+ ....-+.++.. ++ .+|+.+.. .+.|++||+.+
T Consensus 10 ~~~~~v~~~~~------~~v~~~d~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~~~v~~~~------~~~i~~~d~~t 74 (349)
T 1jmx_B 10 GHEYMIVTNYP------NNLHVVDVASDTVYKSCVMP---DKFGPGTAMMAPDNRTAYVLNNH------YGDIYGIDLDT 74 (349)
T ss_dssp TCEEEEEEETT------TEEEEEETTTTEEEEEEECS---SCCSSCEEEECTTSSEEEEEETT------TTEEEEEETTT
T ss_pred CCEEEEEeCCC------CeEEEEECCCCcEEEEEecC---CCCCCceeEECCCCCEEEEEeCC------CCcEEEEeCCC
Confidence 57788887753 36999999988765443211 10012233333 33 57777642 35699999988
Q ss_pred CceEEecCCCCCCC--cccccEEEEEcCC-EEEEEeCC---CCCC---CcCcEEEEECCCC
Q 006645 333 MTWDEIDAVGVPPS--PRSDHAAAVHAER-YLLIFGGG---SHAA---CFNDLHVLDLQTM 384 (637)
Q Consensus 333 ~~W~~~~~~~~~p~--~r~~h~~~~~~~~-~l~v~GG~---~~~~---~~~dl~~~d~~t~ 384 (637)
.+-......+..|. ...-+.+++..++ +||+.+.. .... ..+.+++||+.+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 135 (349)
T 1jmx_B 75 CKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG 135 (349)
T ss_dssp TEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred CcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCc
Confidence 76543322111110 1112344454444 55554421 0000 0246899998764
No 242
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=87.47 E-value=22 Score=34.60 Aligned_cols=146 Identities=10% Similarity=0.026 Sum_probs=69.9
Q ss_pred CCE-EEEEcccCCCcccCcEEEEEc-cCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcce
Q 006645 195 QDK-MYIYGGNHNGRYLSDMHILDL-RSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~-lyv~GG~~~~~~~~~v~~yd~-~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~ 272 (637)
++. +++.|+.+ ..+.+||+ .+.....+... +....-.+++...+.+++.|+.+.
T Consensus 67 ~~~~~l~~~~~d-----g~i~~wd~~~~~~~~~~~~~-------------~~~~~v~~l~~~~~~~l~s~~~d~------ 122 (342)
T 1yfq_A 67 NTDLQIYVGTVQ-----GEILKVDLIGSPSFQALTNN-------------EANLGICRICKYGDDKLIAASWDG------ 122 (342)
T ss_dssp SSSEEEEEEETT-----SCEEEECSSSSSSEEECBSC-------------CCCSCEEEEEEETTTEEEEEETTS------
T ss_pred CCCcEEEEEcCC-----CeEEEEEeccCCceEecccc-------------CCCCceEEEEeCCCCEEEEEcCCC------
Confidence 566 66677643 36889999 88766444220 011111122222255666666543
Q ss_pred eEEEEECCCCc-------eEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCC-Cc--eEEecCCC
Q 006645 273 QVKVFDLQTCS-------WSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLET-MT--WDEIDAVG 342 (637)
Q Consensus 273 ~v~~yd~~t~~-------W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t-~~--W~~~~~~~ 342 (637)
.+.+||+.+.. ...+.. ......-.++....+. ++.|+. -..+.+||+.+ .. ......
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~-l~~~~~------d~~i~i~d~~~~~~~~~~~~~~-- 190 (342)
T 1yfq_A 123 LIEVIDPRNYGDGVIAVKNLNSNN---TKVKNKIFTMDTNSSR-LIVGMN------NSQVQWFRLPLCEDDNGTIEES-- 190 (342)
T ss_dssp EEEEECHHHHTTBCEEEEESCSSS---SSSCCCEEEEEECSSE-EEEEES------TTEEEEEESSCCTTCCCEEEEC--
T ss_pred eEEEEcccccccccccccCCeeeE---EeeCCceEEEEecCCc-EEEEeC------CCeEEEEECCccccccceeeec--
Confidence 57788766410 111111 1211122223333455 555654 24689999887 33 333321
Q ss_pred CCCCcccccEEEEEc-CCEEEEEeCCCCCCCcCcEEEEECCC
Q 006645 343 VPPSPRSDHAAAVHA-ERYLLIFGGGSHAACFNDLHVLDLQT 383 (637)
Q Consensus 343 ~~p~~r~~h~~~~~~-~~~l~v~GG~~~~~~~~dl~~~d~~t 383 (637)
+....-.+++... ++.+++.|+.+ ..+.+||...
T Consensus 191 --~~~~~i~~i~~~~~~~~~l~~~~~d-----g~i~i~~~~~ 225 (342)
T 1yfq_A 191 --GLKYQIRDVALLPKEQEGYACSSID-----GRVAVEFFDD 225 (342)
T ss_dssp --SCSSCEEEEEECSGGGCEEEEEETT-----SEEEEEECCT
T ss_pred --CCCCceeEEEECCCCCCEEEEEecC-----CcEEEEEEcC
Confidence 1112223444444 55677777753 2355555543
No 243
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=87.45 E-value=0.44 Score=52.28 Aligned_cols=66 Identities=23% Similarity=0.341 Sum_probs=44.3
Q ss_pred ccCCCChHHHHHHhhhheeeeeCCCCCCC--CCCCC---Hh-----h-----hHHH-----HHHhcCCCCCHHHHHHHHH
Q 006645 36 LTSKFSNDSALLLYALYQQATVGPCNVPK--PSSWS---PV-----E-----QSKW-----KSWQGLGNMATTEAMRLFV 95 (637)
Q Consensus 36 ~~~~~~~~~~l~ly~l~kqa~~g~~~~~~--p~~~~---~~-----~-----~~k~-----~aw~~~~~~s~~~a~~~yv 95 (637)
+.-+.+.++.+.|=||--||.+||++... |++++ ++ . ...| ..|+++.|||+.+|+..|+
T Consensus 113 G~l~c~~e~a~~LAAL~lQae~GDy~~~~~~~~yl~~~~~lP~~vl~~~~~s~e~~~~~I~~~hk~l~G~s~~eA~~~yL 192 (575)
T 2i1j_A 113 DEIYCPPETSVLLASYAVQARHGDHNPAVHGPGFLANDRLLPQRVTDQHKMSREEWEQSITNWWQEHRGMLREDAMMEYL 192 (575)
T ss_dssp TSSCCCHHHHHHHHHHHHHHHHCSCCTTTCCTTTTTTCCCSCHHHHHTBCCCHHHHHHHHHHHHGGGTTCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCChhhcccccccccccCCHHHHhhcCCCHHHHHHHHHHHHHHccCCCHHHHHHHHH
Confidence 34467778888888888888888887542 44331 11 1 1233 4588888888888888888
Q ss_pred HHHHHh
Q 006645 96 KILEEE 101 (637)
Q Consensus 96 ~~~~~~ 101 (637)
.++.++
T Consensus 193 ~~a~~l 198 (575)
T 2i1j_A 193 KIAQDL 198 (575)
T ss_dssp HHHTTS
T ss_pred HHHHhc
Confidence 887653
No 244
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=87.39 E-value=12 Score=38.47 Aligned_cols=106 Identities=9% Similarity=0.099 Sum_probs=58.6
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLET 332 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t 332 (637)
++.+++.||.++ .|.+||..++.....-. .......++.+ ++.+++.||.++ .|.+||+.+
T Consensus 119 ~~~~l~s~s~Dg------~i~vwd~~~~~~~~~l~-----~h~~~V~~v~~~~~~~~l~sgs~D~------~i~iwd~~~ 181 (410)
T 1vyh_C 119 VFSVMVSASEDA------TIKVWDYETGDFERTLK-----GHTDSVQDISFDHSGKLLASCSADM------TIKLWDFQG 181 (410)
T ss_dssp SSSEEEEEESSS------CEEEEETTTCCCCEEEC-----CCSSCEEEEEECTTSSEEEEEETTS------CCCEEETTS
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEEe-----ccCCcEEEEEEcCCCCEEEEEeCCC------eEEEEeCCC
Confidence 456777777654 48899988776443311 11112223333 457778887643 467888876
Q ss_pred CceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCee
Q 006645 333 MTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEW 386 (637)
Q Consensus 333 ~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W 386 (637)
..-... .. .....-.++++..++..++.|+.+ ..+.+||+.+...
T Consensus 182 ~~~~~~--~~--~h~~~V~~v~~~p~~~~l~s~s~D-----~~i~~wd~~~~~~ 226 (410)
T 1vyh_C 182 FECIRT--MH--GHDHNVSSVSIMPNGDHIVSASRD-----KTIKMWEVQTGYC 226 (410)
T ss_dssp SCEEEC--CC--CCSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCE
T ss_pred CceeEE--Ec--CCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcE
Confidence 543221 10 111112233444455567777754 3588999887654
No 245
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=87.33 E-value=3.4 Score=32.91 Aligned_cols=25 Identities=24% Similarity=0.352 Sum_probs=13.3
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHHH
Q 006645 542 QDLTEAESQNTDLYKELQSVRGQLA 566 (637)
Q Consensus 542 ~~l~e~e~~~~~~~~elq~~~~ql~ 566 (637)
++|+.++.++..++.++..++.++.
T Consensus 22 rEle~le~~Ie~LE~~i~~le~~la 46 (89)
T 2lw1_A 22 RELEQLPQLLEDLEAKLEALQTQVA 46 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444455555555555555555554
No 246
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=87.31 E-value=25 Score=34.95 Aligned_cols=33 Identities=0% Similarity=-0.016 Sum_probs=20.2
Q ss_pred EEEEEcCC-EEEEEeCCCCCCCcCcEEEEECCCCeeEec
Q 006645 352 AAAVHAER-YLLIFGGGSHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 352 ~~~~~~~~-~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l 389 (637)
.+++..++ .||+.+..+ +.+.+||+.++.+..+
T Consensus 215 ~~~~spdg~~l~v~~~~~-----~~v~v~~~~~g~~~~~ 248 (361)
T 3scy_A 215 HLIFNSDGKFAYLINEIG-----GTVIAFRYADGMLDEI 248 (361)
T ss_dssp EEEECTTSSEEEEEETTT-----CEEEEEEEETTEEEEE
T ss_pred EEEEcCCCCEEEEEcCCC-----CeEEEEEecCCceEEe
Confidence 34444444 577765322 4588898887777554
No 247
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=87.29 E-value=6.6 Score=38.51 Aligned_cols=146 Identities=13% Similarity=0.052 Sum_probs=71.7
Q ss_pred EEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcceeE
Q 006645 197 KMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEIIQV 274 (637)
Q Consensus 197 ~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~~v 274 (637)
.+++.||.+ ..+..||+.+.+....-.. ... .-.++.+ ++.+++.|+.+. .+
T Consensus 186 ~~~~s~~~d-----~~i~i~d~~~~~~~~~~~~-------------h~~--~v~~~~~s~~~~~l~s~s~Dg------~i 239 (340)
T 4aow_A 186 PIIVSCGWD-----KLVKVWNLANCKLKTNHIG-------------HTG--YLNTVTVSPDGSLCASGGKDG------QA 239 (340)
T ss_dssp CEEEEEETT-----SCEEEEETTTTEEEEEECC-------------CSS--CEEEEEECTTSSEEEEEETTC------EE
T ss_pred cEEEEEcCC-----CEEEEEECCCCceeeEecC-------------CCC--cEEEEEECCCCCEEEEEeCCC------eE
Confidence 355555532 3478889888765433110 111 1122233 567777787643 58
Q ss_pred EEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCC-----CCccc
Q 006645 275 KVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVP-----PSPRS 349 (637)
Q Consensus 275 ~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~-----p~~r~ 349 (637)
.+||+.+..-...-.. ...-.+++...+..++.|+.+ +.|.+||+.+..-......... ..+..
T Consensus 240 ~iwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~ 308 (340)
T 4aow_A 240 MLWDLNEGKHLYTLDG-----GDIINALCFSPNRYWLCAATG------PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQ 308 (340)
T ss_dssp EEEETTTTEEEEEEEC-----SSCEEEEEECSSSSEEEEEET------TEEEEEETTTTEEEEEECCC-------CCCCC
T ss_pred EEEEeccCceeeeecC-----CceEEeeecCCCCceeeccCC------CEEEEEECCCCeEEEeccccceeeeccCCCCC
Confidence 8889887654333221 111112222234445555542 4588888877653322111000 01111
Q ss_pred ccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCC
Q 006645 350 DHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTM 384 (637)
Q Consensus 350 ~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~ 384 (637)
-.+++...++.+++.||.++ .|.+||+.++
T Consensus 309 v~~l~~s~dg~~l~sgs~Dg-----~v~iW~~~tG 338 (340)
T 4aow_A 309 CTSLAWSADGQTLFAGYTDN-----LVRVWQVTIG 338 (340)
T ss_dssp EEEEEECTTSSEEEEEETTS-----CEEEEEEEC-
T ss_pred EEEEEECCCCCEEEEEeCCC-----EEEEEeCCCc
Confidence 12333444556777777542 4788887765
No 248
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=87.22 E-value=6.5 Score=40.79 Aligned_cols=65 Identities=11% Similarity=0.045 Sum_probs=33.8
Q ss_pred EEEEeCCCCCCCCCCceEEEECCCC---ceEEecCCCCCCCcccccEEEEEc-CCEEEEEeCCCCCCCcCcEEEEECCCC
Q 006645 309 LVIFGGEDAKRSLLNDLHILDLETM---TWDEIDAVGVPPSPRSDHAAAVHA-ERYLLIFGGGSHAACFNDLHVLDLQTM 384 (637)
Q Consensus 309 lyv~GG~~~~~~~~n~i~~yd~~t~---~W~~~~~~~~~p~~r~~h~~~~~~-~~~l~v~GG~~~~~~~~dl~~~d~~t~ 384 (637)
+++.|+.+ ..|.+||+.+. .+..............-++++... ++.+++.|+.+ ..|.+||+.+.
T Consensus 196 ~l~s~~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-----g~i~i~d~~~~ 264 (430)
T 2xyi_A 196 YLLSASDD------HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-----QKLMIWDTRNN 264 (430)
T ss_dssp EEEEECTT------SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCS
T ss_pred eEEEEeCC------CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-----CeEEEEECCCC
Confidence 77777653 45889998762 222110000001112223344433 45577777643 45889998865
No 249
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=87.09 E-value=12 Score=41.63 Aligned_cols=165 Identities=12% Similarity=-0.020 Sum_probs=85.1
Q ss_pred CCEEEEEcccCCC--------cccCcEEEEEccCCeEE--EeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEE
Q 006645 195 QDKMYIYGGNHNG--------RYLSDMHILDLRSWAWS--KIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIA 262 (637)
Q Consensus 195 ~~~lyv~GG~~~~--------~~~~~v~~yd~~t~~W~--~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~G 262 (637)
+++.++++..... .....++++++.+..-. .+... +........+.+ +++..+++
T Consensus 178 Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~-------------~~~~~~~~~~~~SpDG~~l~~~ 244 (695)
T 2bkl_A 178 DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHER-------------TGDPTTFLQSDLSRDGKYLFVY 244 (695)
T ss_dssp TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECC-------------CCCTTCEEEEEECTTSCCEEEE
T ss_pred CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEec-------------CCCCEEEEEEEECCCCCEEEEE
Confidence 4555555554322 23456999999886532 22111 111111122222 45444444
Q ss_pred ccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCc---eEEec
Q 006645 263 GHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMT---WDEID 339 (637)
Q Consensus 263 G~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~---W~~~~ 339 (637)
..... ..+.++.+|..+..|..+... .. .....+..++.+|+....+. ....|+++|+.+.. |..+.
T Consensus 245 ~~~~~--~~~~l~~~~~~~~~~~~l~~~----~~-~~~~~~~~~g~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~~l~ 314 (695)
T 2bkl_A 245 ILRGW--SENDVYWKRPGEKDFRLLVKG----VG-AKYEVHAWKDRFYVLTDEGA---PRQRVFEVDPAKPARASWKEIV 314 (695)
T ss_dssp EEETT--TEEEEEEECTTCSSCEEEEEC----SS-CCEEEEEETTEEEEEECTTC---TTCEEEEEBTTBCSGGGCEEEE
T ss_pred EeCCC--CceEEEEEcCCCCceEEeecC----CC-ceEEEEecCCcEEEEECCCC---CCCEEEEEeCCCCCccCCeEEe
Confidence 43221 456888888878888888541 11 11222234566555543321 24679999987765 88875
Q ss_pred CCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEec
Q 006645 340 AVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 340 ~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l 389 (637)
... + ...-...+.. +++|++.+..++ ...++.+|+....-..+
T Consensus 315 ~~~--~-~~~l~~~~~~-~~~lv~~~~~dg---~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 315 PED--S-SASLLSVSIV-GGHLSLEYLKDA---TSEVRVATLKGKPVRTV 357 (695)
T ss_dssp CCC--S-SCEEEEEEEE-TTEEEEEEEETT---EEEEEEEETTCCEEEEC
T ss_pred cCC--C-CCeEEEEEEE-CCEEEEEEEECC---EEEEEEEeCCCCeeEEe
Confidence 321 1 1111223333 677777765332 34688888765544444
No 250
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=87.00 E-value=4.9 Score=31.51 Aligned_cols=11 Identities=36% Similarity=0.601 Sum_probs=4.0
Q ss_pred HHHHHHHHHHH
Q 006645 554 LYKELQSVRGQ 564 (637)
Q Consensus 554 ~~~elq~~~~q 564 (637)
+++|+...+.+
T Consensus 32 Lq~Ev~~LRGq 42 (83)
T 2xdj_A 32 NQSDIDSLRGQ 42 (83)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhH
Confidence 33333333333
No 251
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=86.86 E-value=11 Score=37.21 Aligned_cols=105 Identities=14% Similarity=0.257 Sum_probs=53.8
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE----CCEEEEEeCCCCCCCCCCceEEEEC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV----GTSLVIFGGEDAKRSLLNDLHILDL 330 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~n~i~~yd~ 330 (637)
++.+++.|+.++ .+.+||+.+..-..... .. ..-.+++.. ++..++.|+.+ ..+.+||+
T Consensus 179 ~~~~l~~~~~d~------~i~i~d~~~~~~~~~~~---~~--~~v~~~~~~~~~~~~~~l~~~~~d------g~i~i~d~ 241 (357)
T 3i2n_A 179 EERVVCAGYDNG------DIKLFDLRNMALRWETN---IK--NGVCSLEFDRKDISMNKLVATSLE------GKFHVFDM 241 (357)
T ss_dssp CCCEEEEEETTS------EEEEEETTTTEEEEEEE---CS--SCEEEEEESCSSSSCCEEEEEEST------TEEEEEEE
T ss_pred CCCEEEEEccCC------eEEEEECccCceeeecC---CC--CceEEEEcCCCCCCCCEEEEECCC------CeEEEEeC
Confidence 567777776533 58899998876433322 11 111222222 45667777643 35778877
Q ss_pred CCCc----eEEecCCCCCCCcccccEEEEEcCCE-EEEEeCCCCCCCcCcEEEEECCCC
Q 006645 331 ETMT----WDEIDAVGVPPSPRSDHAAAVHAERY-LLIFGGGSHAACFNDLHVLDLQTM 384 (637)
Q Consensus 331 ~t~~----W~~~~~~~~~p~~r~~h~~~~~~~~~-l~v~GG~~~~~~~~dl~~~d~~t~ 384 (637)
.+.. +...... .....-.++....++. +++.|+.+ ..+.+||+.+.
T Consensus 242 ~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~ 292 (357)
T 3i2n_A 242 RTQHPTKGFASVSEK---AHKSTVWQVRHLPQNRELFLTAGGA-----GGLHLWKYEYP 292 (357)
T ss_dssp EEEETTTEEEEEEEE---CCSSCEEEEEEETTEEEEEEEEETT-----SEEEEEEEECC
T ss_pred cCCCcccceeeeccC---CCcCCEEEEEECCCCCcEEEEEeCC-----CcEEEeecCCC
Confidence 5431 1110000 1112223444445555 77777754 34777776543
No 252
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=86.74 E-value=24 Score=39.57 Aligned_cols=170 Identities=11% Similarity=0.090 Sum_probs=84.9
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe-CCEEEEEEccCCC------
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW-ENKLLSIAGHTKD------ 267 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~-~~~lyv~GG~~~~------ 267 (637)
+++..+|+...++.-...++++|+.++......... ... .+.+.. +..||+ +.....
T Consensus 173 DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~--------------~~~-~~~~wspD~~l~~-~~~~~~~~~~~~ 236 (741)
T 1yr2_A 173 DGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKW--------------VKF-SGLAWLGNDALLY-SRFAEPKEGQAF 236 (741)
T ss_dssp TSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEE--------------EES-CCCEESTTSEEEE-EECCCC------
T ss_pred CCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCC--------------cee-ccEEEECCCEEEE-EEecCccccccc
Confidence 455555554333332347999999999876542211 000 111111 323333 333221
Q ss_pred --CCcceeEEEEECCCCceE--eeccCCCCCCCCCceEEEEE-CCEEEEEeCCCCCCCCCCceEEEECCCC--c-eEEec
Q 006645 268 --PSEIIQVKVFDLQTCSWS--TLKTYGKPPVSRGGQSVTLV-GTSLVIFGGEDAKRSLLNDLHILDLETM--T-WDEID 339 (637)
Q Consensus 268 --~~~~~~v~~yd~~t~~W~--~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~n~i~~yd~~t~--~-W~~~~ 339 (637)
......++++++.+..-. .+.. ....+......... +++.+++....... ..++++++|+.+. . |..+.
T Consensus 237 ~~~~~~~~v~~~~lgt~~~~~~lv~~--~~~~~~~~~~~~~SpDG~~l~~~~~~~~~-~~~~l~~~d~~~~~~~~~~~l~ 313 (741)
T 1yr2_A 237 QALNYNQTVWLHRLGTPQSADQPVFA--TPELPKRGHGASVSSDGRWVVITSSEGTD-PVNTVHVARVTNGKIGPVTALI 313 (741)
T ss_dssp --CCCCCEEEEEETTSCGGGCEEEEC--CTTCTTCEEEEEECTTSCEEEEEEECTTC-SCCEEEEEEEETTEECCCEEEE
T ss_pred ccCCCCCEEEEEECCCCchhCEEEec--cCCCCeEEEEEEECCCCCEEEEEEEccCC-CcceEEEEECCCCCCcccEEec
Confidence 112456888888776521 2211 11111222222222 44433443332211 2578999999877 6 88885
Q ss_pred CCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCC--CeeEecc
Q 006645 340 AVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQT--MEWSRPT 390 (637)
Q Consensus 340 ~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t--~~W~~l~ 390 (637)
.. .. .....+...++.||+....+ .....|+++|+.+ ..|..+.
T Consensus 314 ~~----~~-~~~~~~~~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~l~ 359 (741)
T 1yr2_A 314 PD----LK-AQWDFVDGVGDQLWFVSGDG--APLKKIVRVDLSGSTPRFDTVV 359 (741)
T ss_dssp CS----SS-SCEEEEEEETTEEEEEECTT--CTTCEEEEEECSSSSCEEEEEE
T ss_pred CC----CC-ceEEEEeccCCEEEEEECCC--CCCCEEEEEeCCCCccccEEEe
Confidence 32 11 11222234567777765432 2235699999988 5798874
No 253
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=86.69 E-value=27 Score=34.69 Aligned_cols=158 Identities=12% Similarity=0.124 Sum_probs=71.0
Q ss_pred EEEEEcccCCCcccCc--EEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCC-EEEEEEccCCCCCccee
Q 006645 197 KMYIYGGNHNGRYLSD--MHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWEN-KLLSIAGHTKDPSEIIQ 273 (637)
Q Consensus 197 ~lyv~GG~~~~~~~~~--v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~-~lyv~GG~~~~~~~~~~ 273 (637)
..+++|.+..+. ... ++.+|..++++..+.... .....+.+..-++ .||+.+.... ....-.
T Consensus 14 ~~~~vg~y~~~~-~~~i~~~~~d~~~g~~~~~~~~~-------------~~~p~~l~~spdg~~l~~~~~~~~-~~~~v~ 78 (361)
T 3scy_A 14 LTMLVGTYTSGN-SKGIYTFRFNEETGESLPLSDAE-------------VANPSYLIPSADGKFVYSVNEFSK-DQAAVS 78 (361)
T ss_dssp EEEEEEECCSSS-CCEEEEEEEETTTCCEEEEEEEE-------------CSCCCSEEECTTSSEEEEEECCSS-TTCEEE
T ss_pred eEEEEEeccCCC-CCCEEEEEEeCCCCCEEEeeccc-------------CCCCceEEECCCCCEEEEEEccCC-CCCcEE
Confidence 344566654321 223 555677888887765421 1111111222234 5666654321 112223
Q ss_pred EEEEECCCCceEeeccCCCCCC-CCCceEEEEECC-EEEEEeCCCCCCCCCCceEEEECCCCc-eE----EecCCCCCCC
Q 006645 274 VKVFDLQTCSWSTLKTYGKPPV-SRGGQSVTLVGT-SLVIFGGEDAKRSLLNDLHILDLETMT-WD----EIDAVGVPPS 346 (637)
Q Consensus 274 v~~yd~~t~~W~~~~~~g~~p~-~r~~~~~~~~~~-~lyv~GG~~~~~~~~n~i~~yd~~t~~-W~----~~~~~~~~p~ 346 (637)
++.++..++....+... +. ...-...+. ++ .||+.+.. .+.+.+|++.+.. .. .+...+..|.
T Consensus 79 ~~~~~~~~g~~~~~~~~---~~~~~~p~~~~~-dg~~l~~~~~~------~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~ 148 (361)
T 3scy_A 79 AFAFDKEKGTLHLLNTQ---KTMGADPCYLTT-NGKNIVTANYS------GGSITVFPIGQDGALLPASDVIEFKGSGPD 148 (361)
T ss_dssp EEEEETTTTEEEEEEEE---ECSSSCEEEEEE-CSSEEEEEETT------TTEEEEEEBCTTSCBCSCSEEEECCCCCSC
T ss_pred EEEEeCCCCcEEEeeEe---ccCCCCcEEEEE-CCCEEEEEECC------CCEEEEEEeCCCCcCcccceeEEccCCCCC
Confidence 45556666777666431 11 111122222 54 56655432 2468888886432 11 1111111121
Q ss_pred c-----ccccEEEEEcCC-EEEEEeCCCCCCCcCcEEEEECCCC
Q 006645 347 P-----RSDHAAAVHAER-YLLIFGGGSHAACFNDLHVLDLQTM 384 (637)
Q Consensus 347 ~-----r~~h~~~~~~~~-~l~v~GG~~~~~~~~dl~~~d~~t~ 384 (637)
+ ...|++++..++ +||+.+..+ +.+++|++...
T Consensus 149 ~~~~~~~~~~~~~~spdg~~l~~~~~~~-----~~v~v~~~~~~ 187 (361)
T 3scy_A 149 KERQTMPHLHCVRITPDGKYLLADDLGT-----DQIHKFNINPN 187 (361)
T ss_dssp TTTCSSCCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTT
T ss_pred ccccCCCcceEEEECCCCCEEEEEeCCC-----CEEEEEEEcCC
Confidence 1 112555555555 566665322 35777766543
No 254
>4dci_A Uncharacterized protein; PSI-biology, midwest center for structural genomics, MCSG, S genomics, unknown function; 2.82A {Synechococcus SP}
Probab=86.67 E-value=3.3 Score=36.39 Aligned_cols=16 Identities=25% Similarity=0.055 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHHHHHH
Q 006645 596 LELLQRQKAASEQAAL 611 (637)
Q Consensus 596 ~~~~~~~~~~~~~~~~ 611 (637)
..++++++..+.+++.
T Consensus 86 k~~r~e~k~~l~~ql~ 101 (150)
T 4dci_A 86 RSELEEQKRNLLQQQA 101 (150)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333333444444443
No 255
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=86.64 E-value=37 Score=36.26 Aligned_cols=105 Identities=12% Similarity=0.135 Sum_probs=59.8
Q ss_pred CEEEEEEcc-CCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCC
Q 006645 256 NKLLSIAGH-TKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLET 332 (637)
Q Consensus 256 ~~lyv~GG~-~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t 332 (637)
+.+++.|+. +. .+.+||+.+..... .. .........++.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 456 ~~~l~~~~~~d~------~i~~~~~~~~~~~~-~~---~~~~~~~v~~~~~s~~g~~l~~~~~d------g~i~iw~~~~ 519 (615)
T 1pgu_A 456 QNYVAVGLEEGN------TIQVFKLSDLEVSF-DL---KTPLRAKPSYISISPSETYIAAGDVM------GKILLYDLQS 519 (615)
T ss_dssp SSEEEEEETTTS------CEEEEETTEEEEEE-EC---SSCCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTT
T ss_pred CCEEEEeecCCC------eEEEEECCCccccc-cc---cCCccCceEEEEECCCCCEEEEcCCC------CeEEEeeCCC
Confidence 666666665 33 48899998876543 11 1222223334444 56777778753 4589999987
Q ss_pred CceEEecCCCCCCCcccccEEEEEc----------CCEEEEEeCCCCCCCcCcEEEEECCCC
Q 006645 333 MTWDEIDAVGVPPSPRSDHAAAVHA----------ERYLLIFGGGSHAACFNDLHVLDLQTM 384 (637)
Q Consensus 333 ~~W~~~~~~~~~p~~r~~h~~~~~~----------~~~l~v~GG~~~~~~~~dl~~~d~~t~ 384 (637)
..-...-. + .....-.+++... ++.+++.|+.+ ..+.+||+.+.
T Consensus 520 ~~~~~~~~-~--~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~ 573 (615)
T 1pgu_A 520 REVKTSRW-A--FRTSKINAISWKPAEKGANEEEIEEDLVATGSLD-----TNIFIYSVKRP 573 (615)
T ss_dssp TEEEECCS-C--CCSSCEEEEEECCCC------CCSCCEEEEEETT-----SCEEEEESSCT
T ss_pred CcceeEee-c--CCCCceeEEEEcCccccccccccCCCEEEEEcCC-----CcEEEEECCCC
Confidence 65433211 0 0112222344444 56677777754 35889998875
No 256
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=86.61 E-value=5.6 Score=34.93 Aligned_cols=52 Identities=10% Similarity=0.056 Sum_probs=22.4
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhh
Q 006645 524 EELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKL 575 (637)
Q Consensus 524 ~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~l 575 (637)
.+.+....+.+.-...|...-..-+..+..++.+|.+.+........++...
T Consensus 27 eeaek~adE~eR~~k~lE~r~~~deEr~~~lE~qLkeak~~aeeadrKyeE~ 78 (147)
T 2b9c_A 27 EEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEV 78 (147)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 3333333333333333443333344444555555555554444444444333
No 257
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=86.47 E-value=6.3 Score=39.47 Aligned_cols=109 Identities=10% Similarity=0.109 Sum_probs=60.6
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLET 332 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t 332 (637)
++.+++.||.+. .|.++|+.++.|...... .........++.+ ++.+++.|+.+ ..+.+||..+
T Consensus 27 ~g~~las~~~D~------~i~iw~~~~~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~s~D------~~v~iw~~~~ 92 (345)
T 3fm0_A 27 AGTLLASCGGDR------RIRIWGTEGDSWICKSVL--SEGHQRTVRKVAWSPCGNYLASASFD------ATTCIWKKNQ 92 (345)
T ss_dssp TSSCEEEEETTS------CEEEEEEETTEEEEEEEE--CSSCSSCEEEEEECTTSSEEEEEETT------SCEEEEEECC
T ss_pred CCCEEEEEcCCC------eEEEEEcCCCcceeeeee--ccccCCcEEEEEECCCCCEEEEEECC------CcEEEEEccC
Confidence 567788888754 478888888887644321 0111112223333 46677777764 3477888877
Q ss_pred CceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCC
Q 006645 333 MTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTM 384 (637)
Q Consensus 333 ~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~ 384 (637)
..+..+.... .....-.+++...++.+++.|+.+ ..+.++|+.+.
T Consensus 93 ~~~~~~~~~~--~h~~~v~~v~~sp~~~~l~s~s~D-----~~v~iwd~~~~ 137 (345)
T 3fm0_A 93 DDFECVTTLE--GHENEVKSVAWAPSGNLLATCSRD-----KSVWVWEVDEE 137 (345)
T ss_dssp C-EEEEEEEC--CCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEECTT
T ss_pred CCeEEEEEcc--CCCCCceEEEEeCCCCEEEEEECC-----CeEEEEECCCC
Confidence 7765543221 111112234444456677777754 34778887654
No 258
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=86.43 E-value=19 Score=35.12 Aligned_cols=10 Identities=30% Similarity=0.491 Sum_probs=4.2
Q ss_pred HHHHHHHHHH
Q 006645 556 KELQSVRGQL 565 (637)
Q Consensus 556 ~elq~~~~ql 565 (637)
+.+++++.+|
T Consensus 66 ~~~eelr~kL 75 (273)
T 3s84_A 66 TQAEQLRRQL 75 (273)
T ss_dssp HHHHHHHHHH
T ss_pred HhHHHHHHHH
Confidence 3344444444
No 259
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=86.32 E-value=0.9 Score=49.80 Aligned_cols=9 Identities=11% Similarity=0.368 Sum_probs=5.0
Q ss_pred cEEEEECCC
Q 006645 375 DLHVLDLQT 383 (637)
Q Consensus 375 dl~~~d~~t 383 (637)
.|.+|+..+
T Consensus 224 GI~v~~~~~ 232 (575)
T 2i1j_A 224 GLNIYEKDD 232 (575)
T ss_dssp EEEEEETTC
T ss_pred eeEEEeCCC
Confidence 356666544
No 260
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=86.31 E-value=20 Score=37.55 Aligned_cols=28 Identities=7% Similarity=0.176 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 006645 591 TLQKELELLQRQKAASEQAALNAKRQSS 618 (637)
Q Consensus 591 ~~~~e~~~~~~~~~~~~~~~~~~~r~~~ 618 (637)
+.+.++..++..+.+....+.+.+..+.
T Consensus 84 eY~~kl~aYe~~~~~~~k~lae~ek~k~ 111 (497)
T 3iox_A 84 DYPVKLKAYEDEQTSIKAALAELEKHKN 111 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4555666677777777777777765443
No 261
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=86.30 E-value=9.2 Score=42.65 Aligned_cols=180 Identities=8% Similarity=-0.036 Sum_probs=91.3
Q ss_pred ECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcc
Q 006645 194 VQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEI 271 (637)
Q Consensus 194 ~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~ 271 (637)
.|+++|.+-- .++.....+|+.+..+..|..+....... .........+.+ +++.++|.-.... ...
T Consensus 78 dG~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~l~d~~~~a---------~~~~~~~~~~~~SPDG~~la~~~~~~G-~~~ 146 (695)
T 2bkl_A 78 RNGRFFYVRT-HKDKEKAILYWRQGESGQEKVLLDPNGWS---------KDGTVSLGTWAVSWDGKKVAFAQKPNA-ADE 146 (695)
T ss_dssp ETTEEEEEEE-CTTCSSCEEEEEESTTSCCEEEECGGGSS---------SSSCEEEEEEEECTTSSEEEEEEEETT-CSC
T ss_pred ECCEEEEEEE-cCCCeEEEEEEEcCCCCCcEEEEchHHhc---------cCCCEEEEEEEECCCCCEEEEEECCCC-Cce
Confidence 4677766543 22333567899998888888775432000 000111222222 5665555433221 234
Q ss_pred eeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCC-------CCCCceEEEECCCCce--EEecCCC
Q 006645 272 IQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKR-------SLLNDLHILDLETMTW--DEIDAVG 342 (637)
Q Consensus 272 ~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~-------~~~n~i~~yd~~t~~W--~~~~~~~ 342 (637)
..|+++|+.++....... .+.......+..-+++.++++..+... .....|+++++.+..- ..+...
T Consensus 147 ~~i~v~dl~tg~~~~~~~---~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~- 222 (695)
T 2bkl_A 147 AVLHVIDVDSGEWSKVDV---IEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHER- 222 (695)
T ss_dssp CEEEEEETTTCCBCSSCC---BSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECC-
T ss_pred EEEEEEECCCCCCcCCcc---cCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEec-
Confidence 589999999988641111 111111111222255666666553321 1245699999988763 223211
Q ss_pred CCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecc
Q 006645 343 VPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPT 390 (637)
Q Consensus 343 ~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~ 390 (637)
...+....+.....++..++++..... ..+++|++|..+..|..+.
T Consensus 223 -~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~~~~~~~~~~~l~ 268 (695)
T 2bkl_A 223 -TGDPTTFLQSDLSRDGKYLFVYILRGW-SENDVYWKRPGEKDFRLLV 268 (695)
T ss_dssp -CCCTTCEEEEEECTTSCCEEEEEEETT-TEEEEEEECTTCSSCEEEE
T ss_pred -CCCCEEEEEEEECCCCCEEEEEEeCCC-CceEEEEEcCCCCceEEee
Confidence 112233334444445544444433221 3457899988777888775
No 262
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=86.29 E-value=20 Score=34.67 Aligned_cols=145 Identities=16% Similarity=0.117 Sum_probs=73.3
Q ss_pred CcEEEEEccCCeEEEeeecccccCCCCCCCCCCCC--cccceEEEeCC-EEEEEEccCCCCCcceeEEEEECCCCceEee
Q 006645 211 SDMHILDLRSWAWSKIQAKAVAESTESPSPALLTP--CAGHSLIPWEN-KLLSIAGHTKDPSEIIQVKVFDLQTCSWSTL 287 (637)
Q Consensus 211 ~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~--r~~hs~v~~~~-~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~ 287 (637)
+.+.++|+.+++....-..+ .. +..+.+..-++ .+|+.++.. ..+++||+.+++-...
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~-------------~~~~~~~~~~~s~dg~~l~v~~~~~------~~v~~~d~~~~~~~~~ 71 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIA-------------DAGPTPMVPMVAPGGRIAYATVNKS------ESLVKIDLVTGETLGR 71 (337)
T ss_dssp TEEEEEETTTTEEEEEEECT-------------TCTTCCCCEEECTTSSEEEEEETTT------TEEEEEETTTCCEEEE
T ss_pred CeEEEEECCCCcEEEEEEcC-------------CCCCCccceEEcCCCCEEEEEeCCC------CeEEEEECCCCCeEee
Confidence 46899999987654432221 10 11122222244 777776532 3699999988775432
Q ss_pred ccCCCCC-CCCCceEEEEE-CC-EEEEEeCCC--CCCC---CCCceEEEECCCCceEEecCCCCCCCcccccEEEEEcCC
Q 006645 288 KTYGKPP-VSRGGQSVTLV-GT-SLVIFGGED--AKRS---LLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAER 359 (637)
Q Consensus 288 ~~~g~~p-~~r~~~~~~~~-~~-~lyv~GG~~--~~~~---~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~ 359 (637)
-..+... ....-+.++.. ++ .||+..... .... ..+.+++||+.+.+....-..+ ...+.+++..++
T Consensus 72 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg 146 (337)
T 1pby_B 72 IDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP-----RQITMLAWARDG 146 (337)
T ss_dssp EECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC-----SSCCCEEECTTS
T ss_pred EEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC-----CCcceeEECCCC
Confidence 2211100 00011222332 33 677664210 0001 1367999999887654432221 112334444444
Q ss_pred -EEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 360 -YLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 360 -~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
+||+.+ +.+++||+.+..-.
T Consensus 147 ~~l~~~~--------~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 147 SKLYGLG--------RDLHVMDPEAGTLV 167 (337)
T ss_dssp SCEEEES--------SSEEEEETTTTEEE
T ss_pred CEEEEeC--------CeEEEEECCCCcEe
Confidence 466552 35999999887654
No 263
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=86.26 E-value=27 Score=34.43 Aligned_cols=67 Identities=15% Similarity=0.173 Sum_probs=42.0
Q ss_pred CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 306 GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 306 ~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
++.+++.|+.+ ..+.+||+.+..-...... .......+++...++.+++.|+.+ ..|.+||+.+..
T Consensus 138 ~~~~l~s~s~d------g~i~~wd~~~~~~~~~~~~---~~~~~i~~~~~~pdg~~lasg~~d-----g~i~iwd~~~~~ 203 (343)
T 3lrv_A 138 NTEYFIWADNR------GTIGFQSYEDDSQYIVHSA---KSDVEYSSGVLHKDSLLLALYSPD-----GILDVYNLSSPD 203 (343)
T ss_dssp -CCEEEEEETT------CCEEEEESSSSCEEEEECC---CSSCCCCEEEECTTSCEEEEECTT-----SCEEEEESSCTT
T ss_pred CCCEEEEEeCC------CcEEEEECCCCcEEEEEec---CCCCceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCC
Confidence 45677777753 3588999988776443311 122223455555677788888754 358999998765
Q ss_pred e
Q 006645 386 W 386 (637)
Q Consensus 386 W 386 (637)
-
T Consensus 204 ~ 204 (343)
T 3lrv_A 204 Q 204 (343)
T ss_dssp S
T ss_pred C
Confidence 3
No 264
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=86.23 E-value=6.3 Score=39.74 Aligned_cols=155 Identities=10% Similarity=0.012 Sum_probs=76.3
Q ss_pred CcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcceeEEEEECCCCceEeec
Q 006645 211 SDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLK 288 (637)
Q Consensus 211 ~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 288 (637)
..++.+|+.+..+..+... .+........+ +++.+++.+.... .....++++|+.++....+.
T Consensus 216 ~~l~~~d~~~~~~~~l~~~--------------~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~g~~~~l~ 280 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKEH--------------AEGESCTHEFWIPDGSAMAYVSYFKG-QTDRVIYKANPETLENEEVM 280 (396)
T ss_dssp CCCEEEETTSCCCEESSCC--------------CTTEEEEEEEECTTSSCEEEEEEETT-TCCEEEEEECTTTCCEEEEE
T ss_pred ceEEEEECCCCceeEeecc--------------CCCccccceEECCCCCEEEEEecCCC-CccceEEEEECCCCCeEEee
Confidence 5799999988777665321 11111112222 4543333333211 22345999999988877664
Q ss_pred cCCCCCCCCCceEEEEE-CCEEEEEeCCCCC----------CCCCCceEEEECCCCceEEecCCCCCC------Cccccc
Q 006645 289 TYGKPPVSRGGQSVTLV-GTSLVIFGGEDAK----------RSLLNDLHILDLETMTWDEIDAVGVPP------SPRSDH 351 (637)
Q Consensus 289 ~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~----------~~~~n~i~~yd~~t~~W~~~~~~~~~p------~~r~~h 351 (637)
. .+. .. .+..- +++++++++.... ..-...++++|+.+.....+....... ......
T Consensus 281 ~---~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 354 (396)
T 3c5m_A 281 V---MPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHP 354 (396)
T ss_dssp E---CCS--EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCC
T ss_pred e---CCC--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCC
Confidence 3 221 11 22222 5666666543210 011367999999988776664321100 000011
Q ss_pred EEEEEcCC-EEEEEeCCCCCCCcCcEEEEECCCCeeEec
Q 006645 352 AAAVHAER-YLLIFGGGSHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 352 ~~~~~~~~-~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l 389 (637)
..+...++ .|++..... . ...+|.+|+.+..++.+
T Consensus 355 ~~~~s~dg~~l~~~s~~~-~--~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 355 HPSFTPNDDGVLFTSDFE-G--VPAIYIADVPESYKHLE 390 (396)
T ss_dssp CCEECTTSSEEEEEECTT-S--SCEEEEEECCTTCC---
T ss_pred CceEccCCCeEEEEecCC-C--CceEEEEEEcccccccc
Confidence 22233344 454444322 2 24699999988877665
No 265
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=85.96 E-value=12 Score=35.06 Aligned_cols=22 Identities=9% Similarity=0.170 Sum_probs=8.1
Q ss_pred hhhhhHHHHHHHHHHHHHHHHH
Q 006645 527 ESSLSKEKLQSIQLKQDLTEAE 548 (637)
Q Consensus 527 e~~~~e~~~~~~~l~~~l~e~e 548 (637)
+++....+.++.+|++...++.
T Consensus 138 ~~~~~~L~~e~~~l~~~~~~l~ 159 (213)
T 1ik9_A 138 QAKNEHLQKENERLLRDWNDVQ 159 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333333
No 266
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=85.92 E-value=24 Score=34.57 Aligned_cols=111 Identities=11% Similarity=0.162 Sum_probs=59.2
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe----CCEEEEEEccCCCCCc
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW----ENKLLSIAGHTKDPSE 270 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~----~~~lyv~GG~~~~~~~ 270 (637)
++.+++.|+.+ ..+.++|+.+.....+..... ... .-.++.+ ++.+++.|+.+.
T Consensus 24 ~g~~lasgs~D-----~~v~lwd~~~~~~~~~~~l~g-----------H~~--~V~~v~~~~~~~~~~l~s~s~D~---- 81 (316)
T 3bg1_A 24 YGTRLATCSSD-----RSVKIFDVRNGGQILIADLRG-----------HEG--PVWQVAWAHPMYGNILASCSYDR---- 81 (316)
T ss_dssp GGCEEEEEETT-----TEEEEEEEETTEEEEEEEEEC-----------CSS--CEEEEEECCGGGSSCEEEEETTS----
T ss_pred CCCEEEEEeCC-----CeEEEEEecCCCcEEEEEEcC-----------CCc--cEEEEEeCCCCCCCEEEEEECCC----
Confidence 45666677632 357788888775443332210 011 1122332 256777777654
Q ss_pred ceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--C--CEEEEEeCCCCCCCCCCceEEEECCCC-ceEEe
Q 006645 271 IIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--G--TSLVIFGGEDAKRSLLNDLHILDLETM-TWDEI 338 (637)
Q Consensus 271 ~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~n~i~~yd~~t~-~W~~~ 338 (637)
.+.++|+.+..|...... ........++.+ + +.+++.|+.+ ..+.+||+.+. .|...
T Consensus 82 --~v~iWd~~~~~~~~~~~~---~~h~~~V~~v~~~p~~~g~~lasgs~D------~~i~lwd~~~~~~~~~~ 143 (316)
T 3bg1_A 82 --KVIIWREENGTWEKSHEH---AGHDSSVNSVCWAPHDYGLILACGSSD------GAISLLTYTGEGQWEVK 143 (316)
T ss_dssp --CEEEECCSSSCCCEEEEE---CCCSSCCCEEEECCTTTCSCEEEECSS------SCEEEEEECSSSCEEEC
T ss_pred --EEEEEECCCCcceEEEEc---cCCCCceEEEEECCCCCCcEEEEEcCC------CCEEEEecCCCCCccee
Confidence 488899988877654321 111111222333 2 4577777754 34778887765 56543
No 267
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=85.79 E-value=27 Score=33.87 Aligned_cols=147 Identities=8% Similarity=0.002 Sum_probs=72.6
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcceeE
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQV 274 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v 274 (637)
++.+++.|+.+ ..+..+|+.+..-...-.. ...........-++.+++.|+.+. .+
T Consensus 24 ~~~~l~s~~~d-----g~v~lWd~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~s~s~d~------~i 79 (304)
T 2ynn_A 24 TEPWVLTTLYS-----GRVELWNYETQVEVRSIQV-------------TETPVRAGKFIARKNWIIVGSDDF------RI 79 (304)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEEC-------------CSSCEEEEEEEGGGTEEEEEETTS------EE
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCceeEEeec-------------cCCcEEEEEEeCCCCEEEEECCCC------EE
Confidence 45566666643 3578889888754322111 011111112222556677777643 58
Q ss_pred EEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccE
Q 006645 275 KVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHA 352 (637)
Q Consensus 275 ~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~ 352 (637)
.+||+.++.-...-. .......++.+ ++.+++.|+.+ ..+.+||+.+.. ...... ......-.+
T Consensus 80 ~vwd~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~sgs~D------~~v~lWd~~~~~-~~~~~~--~~h~~~v~~ 145 (304)
T 2ynn_A 80 RVFNYNTGEKVVDFE-----AHPDYIRSIAVHPTKPYVLSGSDD------LTVKLWNWENNW-ALEQTF--EGHEHFVMC 145 (304)
T ss_dssp EEEETTTCCEEEEEE-----CCSSCEEEEEECSSSSEEEEEETT------SCEEEEEGGGTT-EEEEEE--CCCCSCEEE
T ss_pred EEEECCCCcEEEEEe-----CCCCcEEEEEEcCCCCEEEEECCC------CeEEEEECCCCc-chhhhh--cccCCcEEE
Confidence 889988765332211 11111223333 45667777754 357888886542 111110 001111223
Q ss_pred EEEEc-CCEEEEEeCCCCCCCcCcEEEEECCCC
Q 006645 353 AAVHA-ERYLLIFGGGSHAACFNDLHVLDLQTM 384 (637)
Q Consensus 353 ~~~~~-~~~l~v~GG~~~~~~~~dl~~~d~~t~ 384 (637)
++... ++.+++.|+.+ ..+.+||+.+.
T Consensus 146 v~~~p~~~~~l~sgs~D-----~~v~iwd~~~~ 173 (304)
T 2ynn_A 146 VAFNPKDPSTFASGCLD-----RTVKVWSLGQS 173 (304)
T ss_dssp EEECTTCTTEEEEEETT-----SEEEEEETTCS
T ss_pred EEECCCCCCEEEEEeCC-----CeEEEEECCCC
Confidence 33332 44577778764 35788887543
No 268
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=85.69 E-value=6.8 Score=44.45 Aligned_cols=137 Identities=7% Similarity=0.014 Sum_probs=78.2
Q ss_pred cEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEE-eCCEEEEEEccCCCCCcceeE-EEEECCCCceEeecc
Q 006645 212 DMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIP-WENKLLSIAGHTKDPSEIIQV-KVFDLQTCSWSTLKT 289 (637)
Q Consensus 212 ~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~-~~~~lyv~GG~~~~~~~~~~v-~~yd~~t~~W~~~~~ 289 (637)
-+++||+.+.++..+.... ..+.... .+++. -++.|++-.. +-+ .+||+.++++.....
T Consensus 516 Gl~~~~~~~~~~~~~~~~~----------~l~~~~i-~~i~~d~~g~lWi~T~--------~Glv~~~d~~~~~~~~~~~ 576 (781)
T 3v9f_A 516 GVGIYTPDMQLVRKFNQYE----------GFCSNTI-NQIYRSSKGQMWLATG--------EGLVCFPSARNFDYQVFQR 576 (781)
T ss_dssp CEEEECTTCCEEEEECTTT----------TCSCSCE-EEEEECTTSCEEEEET--------TEEEEESCTTTCCCEEECG
T ss_pred CEEEEeCCCCeEEEccCCC----------CCCCCee-EEEEECCCCCEEEEEC--------CCceEEECCCCCcEEEccc
Confidence 4889999999888774321 1121111 12222 2567777542 135 889999988877754
Q ss_pred CCCCCCCCCceEEEEE-CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccc-cEEEEEcCCEEEEEeCC
Q 006645 290 YGKPPVSRGGQSVTLV-GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSD-HAAAVHAERYLLIFGGG 367 (637)
Q Consensus 290 ~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~-h~~~~~~~~~l~v~GG~ 367 (637)
...+|.... .+++.. ++.|++.+ .+.+.+||+.+.++.......-.+...+. .+++...++. +.|||.
T Consensus 577 ~~gl~~~~i-~~i~~d~~g~lW~~t--------~~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~-l~~g~~ 646 (781)
T 3v9f_A 577 KEGLPNTHI-RAISEDKNGNIWAST--------NTGISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGL-IYFGSI 646 (781)
T ss_dssp GGTCSCCCC-CEEEECSSSCEEEEC--------SSCEEEEETTTTEEEEECGGGTCCSSCEEEEEEEECTTSC-EEEEET
T ss_pred cCCCCCceE-EEEEECCCCCEEEEc--------CCceEEEECCCCceEEecccCCccccccccCceEECCCCE-EEEECC
Confidence 322443322 233332 46777654 23589999999999887643223443332 3344444564 555664
Q ss_pred CCCCCcCcEEEEECCC
Q 006645 368 SHAACFNDLHVLDLQT 383 (637)
Q Consensus 368 ~~~~~~~dl~~~d~~t 383 (637)
+ .+..||+..
T Consensus 647 ~------Gl~~f~p~~ 656 (781)
T 3v9f_A 647 N------GLCFFNPDI 656 (781)
T ss_dssp T------EEEEECSCC
T ss_pred C------ceEEEChhh
Confidence 3 477788764
No 269
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=85.55 E-value=43 Score=37.08 Aligned_cols=111 Identities=9% Similarity=-0.062 Sum_probs=55.7
Q ss_pred ceeEEEEECCC-CceEeeccCCCCCCCC-CceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcc
Q 006645 271 IIQVKVFDLQT-CSWSTLKTYGKPPVSR-GGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPR 348 (637)
Q Consensus 271 ~~~v~~yd~~t-~~W~~~~~~g~~p~~r-~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r 348 (637)
...++++|+.+ +.-..+... .+... ....+..-+..|++....... ....|+++|+.+.+...+........-.
T Consensus 262 ~~~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~pDg~~l~~~~~~~~~--~~~~i~~~d~~~g~~~~~~~~~~~~~~~ 337 (741)
T 2ecf_A 262 QVKLGVISPAEQAQTQWIDLG--KEQDIYLARVNWRDPQHLSFQRQSRDQ--KKLDLVEVTLASNQQRVLAHETSPTWVP 337 (741)
T ss_dssp EEEEEEECSSTTCCCEEECCC--SCSSEEEEEEEEEETTEEEEEEEETTS--SEEEEEEEETTTCCEEEEEEEECSSCCC
T ss_pred eeEEEEEECCCCCceEEecCC--CCcceEEEEEEeCCCCEEEEEEecccC--CeEEEEEEECCCCceEEEEEcCCCCcCC
Confidence 34788899888 775555321 01111 111122223345544332221 2467999999998877664221100000
Q ss_pred cccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEec
Q 006645 349 SDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 349 ~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l 389 (637)
...+.+...++.+++.++.++ ...||.+|.... ...+
T Consensus 338 ~~~~~~~spdg~~~~~~~~~g---~~~l~~~~~~~~-~~~l 374 (741)
T 2ecf_A 338 LHNSLRFLDDGSILWSSERTG---FQHLYRIDSKGK-AAAL 374 (741)
T ss_dssp CCSCCEECTTSCEEEEECTTS---SCEEEEECSSSC-EEES
T ss_pred cCCceEECCCCeEEEEecCCC---ccEEEEEcCCCC-eeee
Confidence 112334445666666665432 356888887766 5554
No 270
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=85.50 E-value=20 Score=35.12 Aligned_cols=152 Identities=12% Similarity=0.179 Sum_probs=76.7
Q ss_pred CEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--C---CEEEEEEccCCCCCc
Q 006645 196 DKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--E---NKLLSIAGHTKDPSE 270 (637)
Q Consensus 196 ~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~---~~lyv~GG~~~~~~~ 270 (637)
..+++.|+... .-..+.+||+.+.......... . .....++.+ + +.+++.|+.++
T Consensus 31 ~~l~~~~s~~~--~d~~v~iw~~~~~~~~~~~~~~-------------~-~~~v~~~~~~~~~~~~~~l~~~~~dg---- 90 (357)
T 3i2n_A 31 AKFVTMGNFAR--GTGVIQLYEIQHGDLKLLREIE-------------K-AKPIKCGTFGATSLQQRYLATGDFGG---- 90 (357)
T ss_dssp SEEEEEEC--C--CCEEEEEEEECSSSEEEEEEEE-------------E-SSCEEEEECTTCCTTTCCEEEEETTS----
T ss_pred ceEEEecCccC--CCcEEEEEeCCCCcccceeeec-------------c-cCcEEEEEEcCCCCCCceEEEecCCC----
Confidence 36666665311 1246888999888765543321 0 011122333 2 47777777654
Q ss_pred ceeEEEEECCCCc--eEeeccCCCCCCCCCceEEE-E-------ECCEEEEEeCCCCCCCCCCceEEEECCCCc--eEEe
Q 006645 271 IIQVKVFDLQTCS--WSTLKTYGKPPVSRGGQSVT-L-------VGTSLVIFGGEDAKRSLLNDLHILDLETMT--WDEI 338 (637)
Q Consensus 271 ~~~v~~yd~~t~~--W~~~~~~g~~p~~r~~~~~~-~-------~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~--W~~~ 338 (637)
.+.+||+.+.. -..+.. ......+. . -++.+++.|+.+ ..+.+||+.+.. ...+
T Consensus 91 --~i~iwd~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~s~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~ 156 (357)
T 3i2n_A 91 --NLHIWNLEAPEMPVYSVKG------HKEIINAIDGIGGLGIGEGAPEIVTGSRD------GTVKVWDPRQKDDPVANM 156 (357)
T ss_dssp --CEEEECTTSCSSCSEEECC------CSSCEEEEEEESGGGCC-CCCEEEEEETT------SCEEEECTTSCSSCSEEE
T ss_pred --eEEEEeCCCCCccEEEEEe------cccceEEEeeccccccCCCccEEEEEeCC------CeEEEEeCCCCCCcceec
Confidence 48888887765 122211 11111111 1 245567777653 358899988764 4444
Q ss_pred cCCCCCCCcccccEEE----EEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 339 DAVGVPPSPRSDHAAA----VHAERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 339 ~~~~~~p~~r~~h~~~----~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
.... ....+...+++ ...++.+++.|+.+ ..+.+||+.+..-.
T Consensus 157 ~~~~-~~~~~~v~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~ 203 (357)
T 3i2n_A 157 EPVQ-GENKRDCWTVAFGNAYNQEERVVCAGYDN-----GDIKLFDLRNMALR 203 (357)
T ss_dssp CCCT-TSCCCCEEEEEEECCCC-CCCEEEEEETT-----SEEEEEETTTTEEE
T ss_pred cccC-CCCCCceEEEEEEeccCCCCCEEEEEccC-----CeEEEEECccCcee
Confidence 3211 01111222222 12355577777643 35899999887643
No 271
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=85.43 E-value=16 Score=31.84 Aligned_cols=27 Identities=15% Similarity=0.163 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 006645 538 IQLKQDLTEAESQNTDLYKELQSVRGQ 564 (637)
Q Consensus 538 ~~l~~~l~e~e~~~~~~~~elq~~~~q 564 (637)
..|+.++..++..+.+++.++.++...
T Consensus 71 ~~L~~El~~l~~ki~dLeeel~eK~K~ 97 (152)
T 3a7p_A 71 AILQKELKSKEQEIRRLKEVIALKNKN 97 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444444333
No 272
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=85.36 E-value=17 Score=36.72 Aligned_cols=114 Identities=13% Similarity=0.138 Sum_probs=57.8
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCC--ceEeeccCCCCCCCCCceEEEEE---CCEEEEEeCCCCCCCCCCceEEEE
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTC--SWSTLKTYGKPPVSRGGQSVTLV---GTSLVIFGGEDAKRSLLNDLHILD 329 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~--~W~~~~~~g~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~n~i~~yd 329 (637)
++.+++.|+.++ .+.+||+.+. ....+.. .........++.+ ++.+++.|+.+ ..|.+||
T Consensus 78 ~~~~l~~~~~dg------~v~vw~~~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~~l~s~~~d------g~v~iwd 142 (416)
T 2pm9_A 78 NNKIIAGALDNG------SLELYSTNEANNAINSMAR---FSNHSSSVKTVKFNAKQDNVLASGGNN------GEIFIWD 142 (416)
T ss_dssp SSSCEEEEESSS------CEEEECCSSTTSCCCEEEE---CCCSSSCCCEEEECSSSTTBEEEECSS------SCEEBCB
T ss_pred CCCeEEEEccCC------eEEEeecccccccccchhh---ccCCccceEEEEEcCCCCCEEEEEcCC------CeEEEEE
Confidence 566777777643 4788888761 1112211 1111112222333 25677777753 3588888
Q ss_pred CCCCce-----EEecCCCCCCCcccccEEEEEcC-CEEEEEeCCCCCCCcCcEEEEECCCCeeEe
Q 006645 330 LETMTW-----DEIDAVGVPPSPRSDHAAAVHAE-RYLLIFGGGSHAACFNDLHVLDLQTMEWSR 388 (637)
Q Consensus 330 ~~t~~W-----~~~~~~~~~p~~r~~h~~~~~~~-~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~ 388 (637)
+.+..= ..............-.+++...+ +.+++.|+.+ ..+.+||+.+.....
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~ 202 (416)
T 2pm9_A 143 MNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS-----NFASIWDLKAKKEVI 202 (416)
T ss_dssp TTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS-----SCEEEEETTTTEEEE
T ss_pred CCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC-----CCEEEEECCCCCcce
Confidence 877640 01110000111122234444444 4577777754 358999998876543
No 273
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=85.33 E-value=28 Score=33.88 Aligned_cols=157 Identities=6% Similarity=-0.093 Sum_probs=77.9
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEE-eCCEEEEEEccCCCCCccee
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIP-WENKLLSIAGHTKDPSEIIQ 273 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~-~~~~lyv~GG~~~~~~~~~~ 273 (637)
++.||+.+-. .+.+++||+ +.....+... ... -++.+. -+++||+.... ...
T Consensus 56 g~~l~~~d~~-----~~~i~~~~~-~g~~~~~~~~--------------~~~-~~gl~~d~dG~l~v~~~~------~~~ 108 (305)
T 3dr2_A 56 QRTLVWSDLV-----GRRVLGWRE-DGTVDVLLDA--------------TAF-TNGNAVDAQQRLVHCEHG------RRA 108 (305)
T ss_dssp GTEEEEEETT-----TTEEEEEET-TSCEEEEEES--------------CSC-EEEEEECTTSCEEEEETT------TTE
T ss_pred CCEEEEEECC-----CCEEEEEeC-CCCEEEEeCC--------------CCc-cceeeECCCCCEEEEECC------CCE
Confidence 3457777542 245889988 4555444321 111 112222 25788876422 135
Q ss_pred EEEEECCCCceEeeccCC-CCCCCCCceEEEEECCEEEEE----eCCCC-------CCCCCCceEEEECCCCceEEecCC
Q 006645 274 VKVFDLQTCSWSTLKTYG-KPPVSRGGQSVTLVGTSLVIF----GGEDA-------KRSLLNDLHILDLETMTWDEIDAV 341 (637)
Q Consensus 274 v~~yd~~t~~W~~~~~~g-~~p~~r~~~~~~~~~~~lyv~----GG~~~-------~~~~~n~i~~yd~~t~~W~~~~~~ 341 (637)
+.+||+. ++...+.... ..+..+....++.-++.||+. |-... ...-.+.|++||+.+.++..+. .
T Consensus 109 v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~ 186 (305)
T 3dr2_A 109 ITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D 186 (305)
T ss_dssp EEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E
T ss_pred EEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c
Confidence 8889886 6666553211 011111111122225678875 32210 0011357999999888887764 1
Q ss_pred CCCCCcccccEEEEEcCC-EEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 342 GVPPSPRSDHAAAVHAER-YLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 342 ~~~p~~r~~h~~~~~~~~-~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
... -...++..++ .||+..........+.|++||+....
T Consensus 187 --~~~---p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 187 --LDH---PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp --ESS---EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred --CCC---CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 111 1234444444 57776543211112568999987654
No 274
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=85.33 E-value=15 Score=37.19 Aligned_cols=113 Identities=16% Similarity=0.165 Sum_probs=57.3
Q ss_pred CEEEEEEccCCCCCcceeEEEEECCCCc------eEeeccCCCCCCCCCceEEEEE--C-CEEEEEeCCCCCCCCCCceE
Q 006645 256 NKLLSIAGHTKDPSEIIQVKVFDLQTCS------WSTLKTYGKPPVSRGGQSVTLV--G-TSLVIFGGEDAKRSLLNDLH 326 (637)
Q Consensus 256 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~------W~~~~~~g~~p~~r~~~~~~~~--~-~~lyv~GG~~~~~~~~n~i~ 326 (637)
+.+++.|+.+. .+.+||+.+.. -.... ...........++.+ + +.+++.|+.+ ..+.
T Consensus 126 ~~~l~s~~~dg------~v~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------g~v~ 191 (416)
T 2pm9_A 126 DNVLASGGNNG------EIFIWDMNKCTESPSNYTPLTP--GQSMSSVDEVISLAWNQSLAHVFASAGSS------NFAS 191 (416)
T ss_dssp TTBEEEECSSS------CEEBCBTTTTSSCTTTCCCBCC--CCSCCSSCCCCEEEECSSCTTEEEEESSS------SCEE
T ss_pred CCEEEEEcCCC------eEEEEECCCCcccccccccccc--ccccCCCCCeeEEEeCCCCCcEEEEEcCC------CCEE
Confidence 67777777644 48888887765 11110 001111111222333 2 5678887753 4589
Q ss_pred EEECCCCceEEecCCCCCCC--cccccEEEEEcC-CEEEEEeCCCCCCCcCcEEEEECCCC
Q 006645 327 ILDLETMTWDEIDAVGVPPS--PRSDHAAAVHAE-RYLLIFGGGSHAACFNDLHVLDLQTM 384 (637)
Q Consensus 327 ~yd~~t~~W~~~~~~~~~p~--~r~~h~~~~~~~-~~l~v~GG~~~~~~~~dl~~~d~~t~ 384 (637)
+||+.+..-...-....... ...-.+++...+ ..+++.|+.++. ...+.+||+.+.
T Consensus 192 iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~~~~ 250 (416)
T 2pm9_A 192 IWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN--DPSILIWDLRNA 250 (416)
T ss_dssp EEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS--SCCCCEEETTST
T ss_pred EEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC--CceEEEEeCCCC
Confidence 99998876544322110000 122233334333 347777765431 125788888764
No 275
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=85.33 E-value=30 Score=36.45 Aligned_cols=180 Identities=12% Similarity=-0.024 Sum_probs=83.0
Q ss_pred ECCEEEEEcccCCCcccCcEEEEEccCC----eEEEeee-cccccCCCCCCCCCCCCcccceEEE-eCCEEEEEEccCCC
Q 006645 194 VQDKMYIYGGNHNGRYLSDMHILDLRSW----AWSKIQA-KAVAESTESPSPALLTPCAGHSLIP-WENKLLSIAGHTKD 267 (637)
Q Consensus 194 ~~~~lyv~GG~~~~~~~~~v~~yd~~t~----~W~~~~~-~~~~~~~~~~~~~~p~~r~~hs~v~-~~~~lyv~GG~~~~ 267 (637)
-..+|||-|.. .+.++++|..++ +-.+.-. .... ......+ -|.... -++ |||-.-.+..
T Consensus 94 ~r~~l~v~~l~-----s~~I~viD~~t~p~~p~~~k~ie~~~~~-------~~~g~s~-Ph~~~~~pdG-i~Vs~~g~~~ 159 (462)
T 2ece_A 94 ERRFLIVPGLR-----SSRIYIIDTKPNPREPKIIKVIEPEEVK-------KVSGYSR-LHTVHCGPDA-IYISALGNEE 159 (462)
T ss_dssp CSCEEEEEBTT-----TCCEEEEECCSCTTSCEEEEEECHHHHH-------HHHCEEE-EEEEEECSSC-EEEEEEEETT
T ss_pred cCCEEEEccCC-----CCeEEEEECCCCCCCceeeeeechhhcc-------cccCCCc-ccceeECCCe-EEEEcCCCcC
Confidence 35678887764 367999999876 3322210 0000 0000112 233333 355 7764322223
Q ss_pred CCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEe---------CCCCCC---CCCCceEEEECCCC
Q 006645 268 PSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFG---------GEDAKR---SLLNDLHILDLETM 333 (637)
Q Consensus 268 ~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~G---------G~~~~~---~~~n~i~~yd~~t~ 333 (637)
+.....+.++|..|++-...-..+..|.. .++.+... .+.+|+-- |+.... .+.+.|.+||+.+.
T Consensus 160 g~~~g~v~vlD~~T~~v~~~~~~~~~~~~-~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~ 238 (462)
T 2ece_A 160 GEGPGGILMLDHYSFEPLGKWEIDRGDQY-LAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR 238 (462)
T ss_dssp SCSCCEEEEECTTTCCEEEECCSBCTTCC-CCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT
T ss_pred CCCCCeEEEEECCCCeEEEEEccCCCCcc-ccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC
Confidence 34557899999998764333221212211 12212222 33444442 232221 35688999999876
Q ss_pred ceEEecCCCCC-CCcccccEEEEE--cCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecc
Q 006645 334 TWDEIDAVGVP-PSPRSDHAAAVH--AERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPT 390 (637)
Q Consensus 334 ~W~~~~~~~~~-p~~r~~h~~~~~--~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~ 390 (637)
+-..--..+.. ..|| |....+ .+.++||..-.+-....+.|++|....+.|....
T Consensus 239 k~~~tI~vg~~g~~P~--~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~ 296 (462)
T 2ece_A 239 KRIHSLTLGEENRMAL--ELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEK 296 (462)
T ss_dssp EEEEEEESCTTEEEEE--EEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEE
T ss_pred cEeeEEecCCCCCccc--eeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEE
Confidence 32221111100 0111 111112 2456777665222223345666555557787654
No 276
>3k29_A Putative uncharacterized protein; YSCO, type III secretion apparatus, S genomics, csgid; HET: MSE; 2.00A {Chlamydia trachomatis}
Probab=85.28 E-value=19 Score=31.77 Aligned_cols=7 Identities=14% Similarity=0.192 Sum_probs=2.5
Q ss_pred HHHHHHh
Q 006645 564 QLAAEQS 570 (637)
Q Consensus 564 ql~~~q~ 570 (637)
++..+++
T Consensus 100 ~Ve~e~q 106 (169)
T 3k29_A 100 NVLAASK 106 (169)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 277
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=85.27 E-value=9.5 Score=40.44 Aligned_cols=8 Identities=25% Similarity=0.501 Sum_probs=4.8
Q ss_pred ECCEEEEE
Q 006645 194 VQDKMYIY 201 (637)
Q Consensus 194 ~~~~lyv~ 201 (637)
++|++|.+
T Consensus 113 ~dGk~Ygl 120 (471)
T 3mq9_A 113 YNGKLIAY 120 (471)
T ss_dssp ETTEECEE
T ss_pred ECCEEEEE
Confidence 56666654
No 278
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=85.25 E-value=32 Score=34.30 Aligned_cols=106 Identities=14% Similarity=0.103 Sum_probs=59.3
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLET 332 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t 332 (637)
++.+++.|+.+. .+.+||+.+++....-. .......++.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 209 ~g~~l~sgs~Dg------~v~~wd~~~~~~~~~~~-----~h~~~v~~v~~~p~~~~l~s~s~D------~~v~lwd~~~ 271 (354)
T 2pbi_B 209 TGNTFVSGGCDK------KAMVWDMRSGQCVQAFE-----THESDVNSVRYYPSGDAFASGSDD------ATCRLYDLRA 271 (354)
T ss_dssp SCCEEEEEETTS------CEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTT
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEec-----CCCCCeEEEEEeCCCCEEEEEeCC------CeEEEEECCC
Confidence 356778887754 48899998876544321 11112223333 45677777754 3588899887
Q ss_pred CceEEecCCCCCCCcccc-cEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 333 MTWDEIDAVGVPPSPRSD-HAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 333 ~~W~~~~~~~~~p~~r~~-h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
..-...-.. ...... .+++...++.+++.|+.+ ..+.+||+.+..
T Consensus 272 ~~~~~~~~~---~~~~~~~~~~~~s~~g~~l~~g~~d-----~~i~vwd~~~~~ 317 (354)
T 2pbi_B 272 DREVAIYSK---ESIIFGASSVDFSLSGRLLFAGYND-----YTINVWDVLKGS 317 (354)
T ss_dssp TEEEEEECC---TTCCSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCS
T ss_pred CcEEEEEcC---CCcccceeEEEEeCCCCEEEEEECC-----CcEEEEECCCCc
Confidence 653332211 111112 233333456677777643 358899986654
No 279
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=85.14 E-value=12 Score=38.66 Aligned_cols=103 Identities=15% Similarity=0.133 Sum_probs=51.9
Q ss_pred EEEEEccCCCCCcceeEEEEECCCC---ceEeeccCCCCCCCCCceEEEEE---CCEEEEEeCCCCCCCCCCceEEEECC
Q 006645 258 LLSIAGHTKDPSEIIQVKVFDLQTC---SWSTLKTYGKPPVSRGGQSVTLV---GTSLVIFGGEDAKRSLLNDLHILDLE 331 (637)
Q Consensus 258 lyv~GG~~~~~~~~~~v~~yd~~t~---~W~~~~~~g~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~n~i~~yd~~ 331 (637)
+++.|+.++ .|.+||+.+. .+..... ...........++.+ ++.+++.|+.+ ..|.+||+.
T Consensus 196 ~l~s~~~dg------~i~vwd~~~~~~~~~~~~~~-~~~~~h~~~v~~v~~~p~~~~~l~s~~~d------g~i~i~d~~ 262 (430)
T 2xyi_A 196 YLLSASDDH------TICLWDINATPKEHRVIDAK-NIFTGHTAVVEDVAWHLLHESLFGSVADD------QKLMIWDTR 262 (430)
T ss_dssp EEEEECTTS------CEEEEETTSCCBGGGEEECS-EEECCCSSCEEEEEECSSCTTEEEEEETT------SEEEEEETT
T ss_pred eEEEEeCCC------eEEEEeCCCCCCCCceeccc-eeecCCCCCEeeeEEeCCCCCEEEEEeCC------CeEEEEECC
Confidence 777777654 4888998772 2221100 001111111222333 45677777643 468999988
Q ss_pred CCc----eEEecCCCCCCCcccccEEEEEc-CCEEEEEeCCCCCCCcCcEEEEECCC
Q 006645 332 TMT----WDEIDAVGVPPSPRSDHAAAVHA-ERYLLIFGGGSHAACFNDLHVLDLQT 383 (637)
Q Consensus 332 t~~----W~~~~~~~~~p~~r~~h~~~~~~-~~~l~v~GG~~~~~~~~dl~~~d~~t 383 (637)
+.. -..+.. ....-.+++... +..+++.|+.+ ..|.+||+.+
T Consensus 263 ~~~~~~~~~~~~~-----~~~~v~~i~~~p~~~~~l~tg~~d-----g~v~vwd~~~ 309 (430)
T 2xyi_A 263 NNNTSKPSHTVDA-----HTAEVNCLSFNPYSEFILATGSAD-----KTVALWDLRN 309 (430)
T ss_dssp CSCSSSCSEEEEC-----CSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTC
T ss_pred CCCCCcceeEeec-----CCCCeEEEEeCCCCCCEEEEEeCC-----CeEEEEeCCC
Confidence 652 112211 111112333333 33478888764 3588999875
No 280
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=85.12 E-value=10 Score=29.71 Aligned_cols=18 Identities=28% Similarity=0.383 Sum_probs=8.0
Q ss_pred hHHHHHHHHhhhhhHHHH
Q 006645 518 TLKAEKEELESSLSKEKL 535 (637)
Q Consensus 518 ~l~~~~~~le~~~~e~~~ 535 (637)
.++.....|+..+.+.+.
T Consensus 5 ~l~~~~~sLE~~l~e~e~ 22 (84)
T 1gk4_A 5 ALKGTNESLERQMREMEE 22 (84)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344444444444444443
No 281
>3ajw_A Flagellar FLIJ protein; flagellum, type III secretion, coiled-coil, protein transpor; 2.10A {Salmonella typhimurium}
Probab=85.02 E-value=19 Score=31.35 Aligned_cols=38 Identities=16% Similarity=0.095 Sum_probs=19.1
Q ss_pred hHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhh
Q 006645 513 EHLIATLKAEKEELESSLSKEKLQSIQLKQDLTEAESQ 550 (637)
Q Consensus 513 e~~~~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~ 550 (637)
+.++..-+...++....+.+.+...+..+.+|..++..
T Consensus 11 ~~ll~l~~~~ed~a~~~l~~a~~~~~~~~~~L~~L~~~ 48 (150)
T 3ajw_A 11 ETLKDLAEKEVDDAARLLGEMRRGCQQAEEQLKMLIDY 48 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444455555555555555555555554443
No 282
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=84.95 E-value=19 Score=33.23 Aligned_cols=153 Identities=14% Similarity=0.172 Sum_probs=78.9
Q ss_pred eEEEECCEEEEEcccCCCcccCcEEEEEccCCe---EEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCC
Q 006645 190 GAAVVQDKMYIYGGNHNGRYLSDMHILDLRSWA---WSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTK 266 (637)
Q Consensus 190 a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~---W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~ 266 (637)
|++.+.+++|+|-| +.+|+++..... =..+... . +.+|. ....+....++++|+|-|.
T Consensus 10 A~~~~~g~~~fFkg-------~~~w~~~~~~~~~gyP~~I~~~------w---~glP~-~iDAa~~~~~g~~yfFkg~-- 70 (196)
T 3c7x_A 10 TVAMLRGEMFVFKE-------RWFWRVRNNQVMDGYPMPIGQF------W---RGLPA-SINTAYERKDGKFVFFKGD-- 70 (196)
T ss_dssp EEEEETTEEEEEET-------TEEEEEETTEECTTCSEEHHHH------S---TTCCS-SCCEEEECTTSCEEEEETT--
T ss_pred EEEEcCCEEEEEEC-------CEEEEEECCccCCCCceEhhHh------c---cCCCC-CccEEEEeCCCcEEEecCC--
Confidence 45577899999988 457777532100 0111110 0 12232 2222222247889999874
Q ss_pred CCCcceeEEEEECCCCce---EeeccCC-CCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceE----
Q 006645 267 DPSEIIQVKVFDLQTCSW---STLKTYG-KPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWD---- 336 (637)
Q Consensus 267 ~~~~~~~v~~yd~~t~~W---~~~~~~g-~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~---- 336 (637)
..|+|+..+... ..++..+ .+|..... ++... ++++|+|-| +..|+||..+.+-.
T Consensus 71 ------~yw~~~~~~~~~gyPk~I~~~~~glP~~~ID-AA~~~~~~g~~yfFkG--------~~yw~yd~~~~~v~~gyP 135 (196)
T 3c7x_A 71 ------KHWVFDEASLEPGYPKHIKELGRGLPTDKID-AALFWMPNGKTYFFRG--------NKYYRFNEELRAVDSEYP 135 (196)
T ss_dssp ------EEEEEETTEECTTCSEEGGGTCBSCCSSCCS-EEEEETTTTEEEEEET--------TEEEEEETTTTEECTTCS
T ss_pred ------EEEEEeCCcccCCCCeEhhhcCCCCCCCccc-EEEEEccCCEEEEEEC--------CEEEEEeCCcccccCCCC
Confidence 578887543211 1222211 13322222 23333 579999976 35789998765321
Q ss_pred -EecCCCCCCCcccccEEEEEcCC-EEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 337 -EIDAVGVPPSPRSDHAAAVHAER-YLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 337 -~~~~~~~~p~~r~~h~~~~~~~~-~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
.+..- +-.|..-.++....++ ++|+|-|. ..|.||..+..
T Consensus 136 k~i~~~--~gip~~idaAf~~~~~~~~YfFkg~-------~y~r~d~~~~~ 177 (196)
T 3c7x_A 136 KNIKVW--EGIPESPRGSFMGSDEVFTYFYKGN-------KYWKFNNQKLK 177 (196)
T ss_dssp EEGGGS--BTCCSSCSEEEECTTSSEEEEEETT-------EEEEEETTTTE
T ss_pred ccHHHC--CCcCCCcceeEEecCCCEEEEEECC-------EEEEEECCcce
Confidence 11110 0112223444444344 89999873 58999987764
No 283
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=84.95 E-value=52 Score=36.47 Aligned_cols=169 Identities=14% Similarity=0.082 Sum_probs=85.7
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCC-EEEEEEccCCC------
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWEN-KLLSIAGHTKD------ 267 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~-~lyv~GG~~~~------ 267 (637)
+++..+|+-..++.-..+++++|+.|++....... ..+....+-. ++ .||+.......
T Consensus 139 Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~--------------~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 139 DGRILAYSLSLAGSDWREIHLMDVESKQPLETPLK--------------DVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEE--------------EEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCCEEEEEEecCCCceEEEEEEECCCCCCCccccC--------------CceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 45555554333333345799999999987654221 1111222233 55 45544332110
Q ss_pred CCcceeEEEEECCCCceE--eeccCCCCC-CCCCceEEEEE-CC-EEEEEeCCCCCCCCCCceEEEECCCC--ceEEecC
Q 006645 268 PSEIIQVKVFDLQTCSWS--TLKTYGKPP-VSRGGQSVTLV-GT-SLVIFGGEDAKRSLLNDLHILDLETM--TWDEIDA 340 (637)
Q Consensus 268 ~~~~~~v~~yd~~t~~W~--~~~~~g~~p-~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~n~i~~yd~~t~--~W~~~~~ 340 (637)
......|+++++.+..=. .+... .. .+.....+... ++ .|++...... ..+.+|++|+.+. .|..+..
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~--~~~~~~~~~~~~~SpDg~~l~~~~~~~~---~~~~i~~~d~~~~~~~~~~l~~ 278 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGA--IPAQHHRYVGATVTEDDRFLLISAANST---SGNRLYVKDLSQENAPLLTVQG 278 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESC--SGGGCCSEEEEEECTTSCEEEEEEESSS---SCCEEEEEETTSTTCCCEEEEC
T ss_pred cCCCcEEEEEECCCCcccceEEEec--CCCCCeEEEEEEEcCCCCEEEEEEccCC---CCcEEEEEECCCCCCceEEEeC
Confidence 123457888888776531 12110 11 11212222222 34 4444333221 2468999998766 7887753
Q ss_pred CCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCC---eeEecc
Q 006645 341 VGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTM---EWSRPT 390 (637)
Q Consensus 341 ~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~---~W~~l~ 390 (637)
. . ......+...++.||+....+. ....|+.+|+.+. .|+.+.
T Consensus 279 ~----~-~~~~~~~~~~g~~l~~~t~~~~--~~~~l~~~d~~~~~~~~~~~l~ 324 (693)
T 3iuj_A 279 D----L-DADVSLVDNKGSTLYLLTNRDA--PNRRLVTVDAANPGPAHWRDLI 324 (693)
T ss_dssp S----S-SSCEEEEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEE
T ss_pred C----C-CceEEEEeccCCEEEEEECCCC--CCCEEEEEeCCCCCccccEEEe
Confidence 2 1 1122223345778888875432 2357999998763 488764
No 284
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=84.89 E-value=8.6 Score=36.02 Aligned_cols=30 Identities=7% Similarity=0.134 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 006645 532 KEKLQSIQLKQDLTEAESQNTDLYKELQSV 561 (637)
Q Consensus 532 e~~~~~~~l~~~l~e~e~~~~~~~~elq~~ 561 (637)
+.++++..|.++.+.++++..++..++++.
T Consensus 136 ~~~~~~~~L~~e~~~l~~~~~~l~~qlE~~ 165 (213)
T 1ik9_A 136 ENQAKNEHLQKENERLLRDWNDVQGRFEKA 165 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444555554444444444444444333
No 285
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=84.88 E-value=24 Score=36.50 Aligned_cols=159 Identities=12% Similarity=0.064 Sum_probs=77.4
Q ss_pred CEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcceeEE
Q 006645 196 DKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQVK 275 (637)
Q Consensus 196 ~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v~ 275 (637)
+.+++.|+.+ ..+.+||+.+......-..+ ........+.. ++.+++.||.+. .|.
T Consensus 210 ~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~------------h~~~v~~~~~s-d~~~l~s~~~d~------~v~ 265 (450)
T 2vdu_B 210 HQFIITSDRD-----EHIKISHYPQCFIVDKWLFG------------HKHFVSSICCG-KDYLLLSAGGDD------KIF 265 (450)
T ss_dssp CEEEEEEETT-----SCEEEEEESCTTCEEEECCC------------CSSCEEEEEEC-STTEEEEEESSS------EEE
T ss_pred CcEEEEEcCC-----CcEEEEECCCCceeeeeecC------------CCCceEEEEEC-CCCEEEEEeCCC------eEE
Confidence 6677777743 36888998876543221110 11111222222 677777777543 688
Q ss_pred EEECCCCceEeeccCCC----------CC----------CCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEEC--C
Q 006645 276 VFDLQTCSWSTLKTYGK----------PP----------VSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDL--E 331 (637)
Q Consensus 276 ~yd~~t~~W~~~~~~g~----------~p----------~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~--~ 331 (637)
+||+.+++....-..+. .+ ........+.+ ++..+++++.. .+.|.+|++ .
T Consensus 266 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~-----d~~i~iw~~~~~ 340 (450)
T 2vdu_B 266 AWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEA-----TKCIIILEMSEK 340 (450)
T ss_dssp EEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETT-----CSEEEEEEECSS
T ss_pred EEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECC-----CCeEEEEEeccC
Confidence 99998876433321100 00 00111122222 24444444321 356888988 3
Q ss_pred C-CceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCC----CCcCcEEEEECCCCeeE
Q 006645 332 T-MTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHA----ACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 332 t-~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~----~~~~dl~~~d~~t~~W~ 387 (637)
+ ..+..+... +....-.++++.. +.+++..+.... ...-.+|.++..++.|.
T Consensus 341 ~~~~l~~~~~~---~~~~~v~~~~~~~-~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 341 QKGDLALKQII---TFPYNVISLSAHN-DEFQVTLDNKESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp STTCEEEEEEE---ECSSCEEEEEEET-TEEEEEECCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred CCCceeeccEe---ccCCceEEEEecC-CcEEEEEecccCCCCCCcceEEEEEEcCCCeEE
Confidence 3 445544322 1112223444444 456666553321 22236777788888875
No 286
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=84.87 E-value=23 Score=34.97 Aligned_cols=147 Identities=10% Similarity=-0.072 Sum_probs=77.3
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcceeE
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQV 274 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v 274 (637)
++.+|+++.. ...+++||+.++....+.. + ......+..-++++|+... +.+
T Consensus 60 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~--------------~-~~v~~i~~~~dg~l~v~~~--------~gl 111 (326)
T 2ghs_A 60 SGTAWWFNIL-----ERELHELHLASGRKTVHAL--------------P-FMGSALAKISDSKQLIASD--------DGL 111 (326)
T ss_dssp TTEEEEEEGG-----GTEEEEEETTTTEEEEEEC--------------S-SCEEEEEEEETTEEEEEET--------TEE
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEEC--------------C-CcceEEEEeCCCeEEEEEC--------CCE
Confidence 3678887643 2468999999887655421 1 1111122234778887642 248
Q ss_pred EEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccE
Q 006645 275 KVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHA 352 (637)
Q Consensus 275 ~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~ 352 (637)
++||+.+++...+...... .+........+ ++++|+.............|++|| +.+...+... .....+
T Consensus 112 ~~~d~~~g~~~~~~~~~~~-~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~-----~~~~~~ 183 (326)
T 2ghs_A 112 FLRDTATGVLTLHAELESD-LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFAD-----ISIPNS 183 (326)
T ss_dssp EEEETTTCCEEEEECSSTT-CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEE-----ESSEEE
T ss_pred EEEECCCCcEEEEeeCCCC-CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCC-----CcccCC
Confidence 9999999988776432110 11111222223 457766332111111245789998 4565554211 011123
Q ss_pred EEEEcCC-EEEEEeCCCCCCCcCcEEEEECC
Q 006645 353 AAVHAER-YLLIFGGGSHAACFNDLHVLDLQ 382 (637)
Q Consensus 353 ~~~~~~~-~l~v~GG~~~~~~~~dl~~~d~~ 382 (637)
.++..++ .||+.... .+.|++||+.
T Consensus 184 i~~s~dg~~lyv~~~~-----~~~I~~~d~~ 209 (326)
T 2ghs_A 184 ICFSPDGTTGYFVDTK-----VNRLMRVPLD 209 (326)
T ss_dssp EEECTTSCEEEEEETT-----TCEEEEEEBC
T ss_pred eEEcCCCCEEEEEECC-----CCEEEEEEcc
Confidence 4444344 57776532 2468999975
No 287
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=84.84 E-value=1.4 Score=48.16 Aligned_cols=71 Identities=18% Similarity=0.217 Sum_probs=52.2
Q ss_pred cccCCCChHHHHHHhhhheeeeeCCCCCCCCCCCCH---------hh--------------------------hHH----
Q 006645 35 ELTSKFSNDSALLLYALYQQATVGPCNVPKPSSWSP---------VE--------------------------QSK---- 75 (637)
Q Consensus 35 ~~~~~~~~~~~l~ly~l~kqa~~g~~~~~~p~~~~~---------~~--------------------------~~k---- 75 (637)
.+.-..+.++.+.|=||.-|+..||++.... ..++ .. ...
T Consensus 334 ~G~~~~~~e~a~~LAAl~lQ~~~GD~~~~~~-~~~l~~~lP~~~l~~~~~~~~k~~s~~~~~l~~~~~~~~~~~~~W~~~ 412 (555)
T 3au4_A 334 HGHHPAPEENLQVLAALRLQYLQGDYTLHAA-IPPLEEVYSLQRLKARISQSTKTFSFRTGSVVRQKVEEEQMLDMWIKE 412 (555)
T ss_dssp TTCSCCCHHHHHHHHHHHHHHHHCSCCTTCC-CCCGGGTSCCHHHHHHHHHTTCCEECCTTSCCEECCCCHHHHHHHTHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHcCCCccccc-hhhhhhhCCHHHhhhhhccccccccccccccccccchhhhhHHHHHHH
Confidence 3456788999999999999999999976421 1111 00 012
Q ss_pred ---------HHHHhcCCCCCHHHHHHHHHHHHHHhCCCccc
Q 006645 76 ---------WKSWQGLGNMATTEAMRLFVKILEEEDPGWYS 107 (637)
Q Consensus 76 ---------~~aw~~~~~~s~~~a~~~yv~~~~~~~~~~~~ 107 (637)
-..|+++.|||++||+.+|++++.++ |.|..
T Consensus 413 ~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~~~l-p~yG~ 452 (555)
T 3au4_A 413 EVSSARASIIDKWRKFQGMNQEQAMAKYMALIKEW-PGYGS 452 (555)
T ss_dssp HHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTS-TTTTC
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC-CCcCc
Confidence 25689999999999999999999877 76643
No 288
>2ic9_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 2.00A {Sin nombre virus}
Probab=84.80 E-value=6.5 Score=31.30 Aligned_cols=16 Identities=31% Similarity=0.501 Sum_probs=6.9
Q ss_pred hhhHHHHHHHHHHHHh
Q 006645 573 FKLEVDVAELRQKLQT 588 (637)
Q Consensus 573 ~~le~~~~el~~~lq~ 588 (637)
..||.++++|+++|.+
T Consensus 55 ~~lq~Ki~elkr~lAd 70 (96)
T 2ic9_A 55 SALETKLGELKRELAD 70 (96)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3344444444444433
No 289
>2no2_A HIP-I, huntingtin-interacting protein 1; clathrin light chain binding, HIP1 coiled-coil domain, endocytosis, clathrin SELF-assembly, cell adhesion; 2.80A {Homo sapiens}
Probab=84.78 E-value=15 Score=30.20 Aligned_cols=23 Identities=26% Similarity=0.330 Sum_probs=9.0
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHH
Q 006645 580 AELRQKLQTMETLQKELELLQRQ 602 (637)
Q Consensus 580 ~el~~~lq~~q~~~~e~~~~~~~ 602 (637)
++|..+-++++.+++.++..++.
T Consensus 61 ~eL~~~~~el~~lq~~l~~~~~~ 83 (107)
T 2no2_A 61 QELATSQRELQVLQGSLETSAQS 83 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333344444444444433
No 290
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=84.52 E-value=27 Score=34.20 Aligned_cols=108 Identities=13% Similarity=0.084 Sum_probs=57.8
Q ss_pred CEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEEEEc-CCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 307 TSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHA-ERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 307 ~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~-~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
+.+++.|+.+ ..|.+||+.+..-...-.. ....-.++.... ++.+++.|+.+ ..|.+||+.+..
T Consensus 85 ~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~ 149 (366)
T 3k26_A 85 HPLLAVAGSR------GIIRIINPITMQCIKHYVG----HGNAINELKFHPRDPNLLLSVSKD-----HALRLWNIQTDT 149 (366)
T ss_dssp CEEEEEEETT------CEEEEECTTTCCEEEEEES----CCSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTTTE
T ss_pred CCEEEEecCC------CEEEEEEchhceEeeeecC----CCCcEEEEEECCCCCCEEEEEeCC-----CeEEEEEeecCe
Confidence 5688888753 4588999887654322110 111222334443 55577777754 358999998776
Q ss_pred eEecccCCCCCCCCcccEEEEECCccccceeeeeeccCCCCEEEEEcCCCCCCcccEEEEeCCCC
Q 006645 386 WSRPTQQGEIPTPRAGHAGVTIGENWFLGLSLVVSSYSGEDVIVAFGGYNGRYNNEVHVLKPSHK 450 (637)
Q Consensus 386 W~~l~~~~~~p~~R~~hs~~~~~~~~yiG~s~~~~~~~g~~~l~v~GG~~~~~~~~v~~~d~~~~ 450 (637)
-...-. ........-.++.+.. ....++.||.++ .+.+||+.+.
T Consensus 150 ~~~~~~--~~~~~~~~v~~~~~~~---------------~~~~l~~~~~dg----~i~i~d~~~~ 193 (366)
T 3k26_A 150 LVAIFG--GVEGHRDEVLSADYDL---------------LGEKIMSCGMDH----SLKLWRINSK 193 (366)
T ss_dssp EEEEEC--STTSCSSCEEEEEECT---------------TSSEEEEEETTS----CEEEEESCSH
T ss_pred EEEEec--ccccccCceeEEEECC---------------CCCEEEEecCCC----CEEEEECCCC
Confidence 543310 1111111222222211 225677777654 6788888764
No 291
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=84.44 E-value=2.5 Score=34.30 Aligned_cols=30 Identities=23% Similarity=0.328 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 006645 536 QSIQLKQDLTEAESQNTDLYKELQSVRGQL 565 (637)
Q Consensus 536 ~~~~l~~~l~e~e~~~~~~~~elq~~~~ql 565 (637)
++..|+++|..++.+..++.+++...+.+|
T Consensus 13 ~~~~lr~ei~~Le~E~~rLr~~~~~LE~~L 42 (100)
T 1go4_E 13 EADTLRLKVEELEGERSRLEEEKRMLEAQL 42 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555555555555555555555555
No 292
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=84.31 E-value=6.4 Score=43.11 Aligned_cols=12 Identities=0% Similarity=-0.025 Sum_probs=5.8
Q ss_pred HHHHHHHHHHhh
Q 006645 604 AASEQAALNAKR 615 (637)
Q Consensus 604 ~~~~~~~~~~~r 615 (637)
..+.+|+.+.++
T Consensus 570 ~~~~~ei~~l~~ 581 (592)
T 1f5n_A 570 RIMKNEIQDLQT 581 (592)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 345555555443
No 293
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=84.30 E-value=40 Score=34.57 Aligned_cols=181 Identities=16% Similarity=0.237 Sum_probs=98.2
Q ss_pred eEEecccCCCCCCCCcceeEEEECCEEEEEcccCCCcccCcEEEEE-ccC-----C-eEEEeeecccccCCCCCCCCCCC
Q 006645 172 QWIAPPISGQRPKARYEHGAAVVQDKMYIYGGNHNGRYLSDMHILD-LRS-----W-AWSKIQAKAVAESTESPSPALLT 244 (637)
Q Consensus 172 ~W~~~~~~g~~p~~R~~~a~~~~~~~lyv~GG~~~~~~~~~v~~yd-~~t-----~-~W~~~~~~~~~~~~~~~~~~~p~ 244 (637)
.|+... .|..|..-.-|+.|.+++.=|++|=.+++.....+-.+- +.. . .=+.++.. .-.
T Consensus 271 pW~~t~-L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~se------------y~~ 337 (670)
T 3ju4_A 271 PWRKTD-LGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSE------------YEP 337 (670)
T ss_dssp CCEEEE-CCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGG------------GCT
T ss_pred Cceecc-cccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhh------------hcc
Confidence 566544 344666667799999999888887544443333332221 111 1 11222110 111
Q ss_pred CcccceEEEeCCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCC-------
Q 006645 245 PCAGHSLIPWENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDA------- 317 (637)
Q Consensus 245 ~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~------- 317 (637)
.-+-.|.-.+++.||+.--.......-+.+.+-+..-..|+.+.-. -.........+.+++.||+||-...
T Consensus 338 ~AsEPCvkyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp--~nvHhtnlPFakvgD~l~mFgsERA~nEWE~G 415 (670)
T 3ju4_A 338 DASEPCIKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFP--HNVHHTTLPFAKVGDDLIMFGSERAENEWEAG 415 (670)
T ss_dssp TEEEEEEEEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECT--TCCCSSCCCEEEETTEEEEEEECSSTTCSSTT
T ss_pred ccccchhhhhCCEEEEEecCcCCCCCcceeeeecccCCchhheecc--ccccccCCCcceeCCEEEEEeccccccccccC
Confidence 2222334456999999864443334556788888888899998541 1112223346778999999986421
Q ss_pred --CCCCC---Cc--eEEEE-----CCCCceEEecC---CCCCCCcccccEEEEEcCCEE-EEEeCC
Q 006645 318 --KRSLL---ND--LHILD-----LETMTWDEIDA---VGVPPSPRSDHAAAVHAERYL-LIFGGG 367 (637)
Q Consensus 318 --~~~~~---n~--i~~yd-----~~t~~W~~~~~---~~~~p~~r~~h~~~~~~~~~l-~v~GG~ 367 (637)
..+|- .. +.+.+ .+.-+|..+.. .|..-..-.+-.++++.++.| |||||-
T Consensus 416 ~pD~RY~a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgE 481 (670)
T 3ju4_A 416 APDDRYKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGE 481 (670)
T ss_dssp CCCCCSSCBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEB
T ss_pred CCcccccccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCc
Confidence 11111 11 22223 34456777642 222333344555666667765 588983
No 294
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=84.24 E-value=23 Score=38.75 Aligned_cols=149 Identities=11% Similarity=0.032 Sum_probs=82.3
Q ss_pred CcEEEEEcc-CC---eEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcceeEEEEECCCCce
Q 006645 211 SDMHILDLR-SW---AWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEIIQVKVFDLQTCSW 284 (637)
Q Consensus 211 ~~v~~yd~~-t~---~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W 284 (637)
.+++++|+. ++ ....+... ... ......+ +++||+.+..+. ...++.+|+.++.+
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~-------------~~~--~~~~~~~spdg~l~~~~~~~~----~~~l~~~~~~~~~~ 277 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGG-------------PEE--AIAQAEWAPDGSLIVATDRTG----WWNLHRVDPATGAA 277 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEE-------------TTB--CEEEEEECTTSCEEEEECTTS----SCEEEEECTTTCCE
T ss_pred cEEEEEEECCCCcccccEEeCCC-------------CCc--eEcceEECCCCeEEEEECCCC----CeEEEEEECCCCce
Confidence 579999999 57 44444221 011 1122222 677777766532 34799999989988
Q ss_pred EeeccCCC---CCCCCC-ceEEEEE-CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEEEEcCC
Q 006645 285 STLKTYGK---PPVSRG-GQSVTLV-GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAER 359 (637)
Q Consensus 285 ~~~~~~g~---~p~~r~-~~~~~~~-~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~ 359 (637)
..+..... .|.-.. ....+.. ++++++.+.. + ...||.+|+.+.....+... .. ...+.....++
T Consensus 278 ~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~----~~~l~~~d~~~~~~~~l~~~----~~-~~~~~~s~~~~ 347 (662)
T 3azo_A 278 TQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G----AAVLGILDPESGELVDAAGP----WT-EWAATLTVSGT 347 (662)
T ss_dssp EESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S----SCEEEEEETTTTEEEECCSS----CC-EEEEEEEEETT
T ss_pred eecccccccccCccccccCceEeEeCCCEEEEEEEc-C----ccEEEEEECCCCcEEEecCC----CC-eEEEEEecCCC
Confidence 87744210 011110 1123333 5677766654 2 35689999988887766421 11 11222133455
Q ss_pred EEEEEeCCCCCCCcCcEEEEECCCCeeEecc
Q 006645 360 YLLIFGGGSHAACFNDLHVLDLQTMEWSRPT 390 (637)
Q Consensus 360 ~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~ 390 (637)
.+++..+.. .....+|.+|+.+.....+.
T Consensus 348 ~~~~~~~~~--~~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 348 RAVGVAASP--RTAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp EEEEEEEET--TEEEEEEEEETTTCCEEEEE
T ss_pred EEEEEEcCC--CCCCEEEEEECCCCceEEee
Confidence 555554322 12347899999888887763
No 295
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=84.23 E-value=6.8 Score=30.69 Aligned_cols=10 Identities=30% Similarity=0.488 Sum_probs=4.0
Q ss_pred hhHHHHHHHH
Q 006645 574 KLEVDVAELR 583 (637)
Q Consensus 574 ~le~~~~el~ 583 (637)
+|+.++++|+
T Consensus 31 ~Lq~Ev~~LR 40 (83)
T 2xdj_A 31 DNQSDIDSLR 40 (83)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3334444443
No 296
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=84.21 E-value=1.6 Score=37.38 Aligned_cols=13 Identities=15% Similarity=0.348 Sum_probs=5.5
Q ss_pred HHHHHHHHHHHHH
Q 006645 533 EKLQSIQLKQDLT 545 (637)
Q Consensus 533 ~~~~~~~l~~~l~ 545 (637)
+..+..+|..++.
T Consensus 44 ~~~e~~~L~~~l~ 56 (135)
T 2e7s_A 44 RDDEVKRLREDIA 56 (135)
T ss_dssp HHHHHHTHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 4444444444443
No 297
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=84.16 E-value=19 Score=40.36 Aligned_cols=149 Identities=13% Similarity=0.080 Sum_probs=82.1
Q ss_pred cCcEEEEEccCC--e-EEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcceeEEEEECCC--Cce
Q 006645 210 LSDMHILDLRSW--A-WSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQVKVFDLQT--CSW 284 (637)
Q Consensus 210 ~~~v~~yd~~t~--~-W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t--~~W 284 (637)
.++++++|+.+. . |..+.... ... .......++.||+....+ .....++.+|+.+ ..|
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~-------------~~~-~~~~~~dg~~l~~~s~~~---~~~~~l~~~d~~~~~~~~ 355 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDL-------------KAQ-WDFVDGVGDQLWFVSGDG---APLKKIVRVDLSGSTPRF 355 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSS-------------SSC-EEEEEEETTEEEEEECTT---CTTCEEEEEECSSSSCEE
T ss_pred cceEEEEECCCCCCcccEEecCCC-------------Cce-EEEEeccCCEEEEEECCC---CCCCEEEEEeCCCCcccc
Confidence 568999999887 6 77774321 111 112224567888776542 2245799999988 579
Q ss_pred EeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEEEE-cCCEEEE
Q 006645 285 STLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVH-AERYLLI 363 (637)
Q Consensus 285 ~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~-~~~~l~v 363 (637)
..+.+.. .. .-..+...+++|++....++ ...|+++++....-..+. .|........... .++.|++
T Consensus 356 ~~l~~~~--~~--~l~~~~~~~~~lv~~~~~dg----~~~l~~~~~~g~~~~~l~----~~~~~~v~~~~~s~d~~~l~~ 423 (741)
T 1yr2_A 356 DTVVPES--KD--NLESVGIAGNRLFASYIHDA----KSQVLAFDLDGKPAGAVS----LPGIGSASGLSGRPGDRHAYL 423 (741)
T ss_dssp EEEECCC--SS--EEEEEEEEBTEEEEEEEETT----EEEEEEEETTSCEEEECB----CSSSCEEEEEECCBTCSCEEE
T ss_pred EEEecCC--CC--eEEEEEEECCEEEEEEEECC----EEEEEEEeCCCCceeecc----CCCCeEEEEeecCCCCCEEEE
Confidence 8885421 11 11123334778887765543 356899998655444443 1211111111111 2233333
Q ss_pred E-eCCCCCCCcCcEEEEECCCCeeEecc
Q 006645 364 F-GGGSHAACFNDLHVLDLQTMEWSRPT 390 (637)
Q Consensus 364 ~-GG~~~~~~~~dl~~~d~~t~~W~~l~ 390 (637)
. .+. ..-..++.||+.++..+.+.
T Consensus 424 ~~ss~---~~P~~i~~~d~~tg~~~~l~ 448 (741)
T 1yr2_A 424 SFSSF---TQPATVLALDPATAKTTPWE 448 (741)
T ss_dssp EEEET---TEEEEEEEEETTTTEEEECS
T ss_pred EEcCC---CCCCEEEEEECCCCcEEEEe
Confidence 2 222 22357999999998876664
No 298
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=84.03 E-value=24 Score=39.68 Aligned_cols=142 Identities=18% Similarity=0.148 Sum_probs=77.0
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~ 272 (637)
++.|+++||.. +-+++||+.++++..+.... ........++.. ++.|++- .. .
T Consensus 482 ~g~lWi~~~t~-----~Gl~~~d~~~~~~~~~~~~~------------~~~~~~~~~i~~d~~g~lWig-t~-------~ 536 (758)
T 3ott_A 482 EGNVWVLLYNN-----KGIDKINPRTREVTKLFADE------------LTGEKSPNYLLCDEDGLLWVG-FH-------G 536 (758)
T ss_dssp TSCEEEEETTC-----SSEEEEETTTTEEEEECTTT------------SCGGGCEEEEEECTTSCEEEE-ET-------T
T ss_pred CCCEEEEccCC-----CCcEEEeCCCCceEEecCCC------------cCCCcccceEEECCCCCEEEE-ec-------C
Confidence 46788866633 34899999999988763211 111111122222 5678864 32 1
Q ss_pred eEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccE
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHA 352 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~ 352 (637)
-+.+||+.+..+..... ..+|. ..-++++.-++.|++... +.+.+||+.+.+..... .|..... .
T Consensus 537 Gl~~~~~~~~~~~~~~~-~gl~~-~~i~~i~~~~g~lWi~t~--------~Gl~~~~~~~~~~~~~~----~~~~~~~-~ 601 (758)
T 3ott_A 537 GVMRINPKDESQQSISF-GSFSN-NEILSMTCVKNSIWVSTT--------NGLWIIDRKTMDARQQN----MTNKRFT-S 601 (758)
T ss_dssp EEEEECC--CCCCBCCC-CC----CCEEEEEEETTEEEEEES--------SCEEEEETTTCCEEEC------CCCCCS-E
T ss_pred ceEEEecCCCceEEecc-cCCCc-cceEEEEECCCCEEEECC--------CCeEEEcCCCceeEEec----CCCCcee-e
Confidence 48899999988776632 22332 222333334678887542 45899999998877653 1222222 3
Q ss_pred EEEE-cCCEEEEEeCCCCCCCcCcEEEEECCC
Q 006645 353 AAVH-AERYLLIFGGGSHAACFNDLHVLDLQT 383 (637)
Q Consensus 353 ~~~~-~~~~l~v~GG~~~~~~~~dl~~~d~~t 383 (637)
++.. .++ -+.|||. +.+..|||..
T Consensus 602 ~~~~~~~G-~l~fG~~------~Gl~~f~p~~ 626 (758)
T 3ott_A 602 LLFDPKED-CVYLGGA------DGFGISHSNL 626 (758)
T ss_dssp EEEETTTT-EEEEECB------SEEEEEEC--
T ss_pred eEEECCCC-cEEEecC------CceEEEChhh
Confidence 3333 356 4566764 3477888764
No 299
>2ic6_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 1.15A {Sin nombre virus}
Probab=83.98 E-value=6.3 Score=30.20 Aligned_cols=12 Identities=42% Similarity=0.761 Sum_probs=4.7
Q ss_pred hHHHHHHHHHHH
Q 006645 575 LEVDVAELRQKL 586 (637)
Q Consensus 575 le~~~~el~~~l 586 (637)
||.++.+|+++|
T Consensus 57 lq~Ki~elkrql 68 (78)
T 2ic6_A 57 LETKLGELKREL 68 (78)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333344443333
No 300
>3fx0_A NF-kappa-B essential modulator; coiled-coil, coiled coil, cytoplasm, disease mutation, ectodermal dysplasia, HOST-virus interaction; 3.20A {Homo sapiens}
Probab=83.90 E-value=0.19 Score=39.94 Aligned_cols=71 Identities=18% Similarity=0.199 Sum_probs=38.4
Q ss_pred HHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q 006645 516 IATLKAEKEELESSLSKEKLQSIQLKQDLTEAE---SQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKL 586 (637)
Q Consensus 516 ~~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e---~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~l 586 (637)
+..|.......++.+..++.++..|++++...+ +++.-++.|...++..+..|+.--.++..+..+|+.+|
T Consensus 19 i~~L~~~L~~AEeaL~~KQ~~ideLKe~i~q~~~~~E~i~vL~aQ~~iY~~DF~aERaaREk~~~EKe~L~~ql 92 (96)
T 3fx0_A 19 LEDLKQQLQQAEEALVAKQEVIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERQAREKLAEKKELLQEQL 92 (96)
T ss_dssp -------CCSSTTTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTSCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 334555555666667777777777777777665 45556777788887777666544334444444444333
No 301
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=83.87 E-value=4.6 Score=32.99 Aligned_cols=16 Identities=19% Similarity=0.526 Sum_probs=7.0
Q ss_pred hhhHHHHHHHHHHHHh
Q 006645 573 FKLEVDVAELRQKLQT 588 (637)
Q Consensus 573 ~~le~~~~el~~~lq~ 588 (637)
..||.++++|+++|.+
T Consensus 72 s~lq~KiaeLKrqLAd 87 (113)
T 4fi5_A 72 VSIQAKIDELKRQLAD 87 (113)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444444444444433
No 302
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=83.84 E-value=18 Score=37.25 Aligned_cols=22 Identities=14% Similarity=0.105 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 006645 589 METLQKELELLQRQKAASEQAA 610 (637)
Q Consensus 589 ~q~~~~e~~~~~~~~~~~~~~~ 610 (637)
+.-|+.-|+.++.+.+.||-.+
T Consensus 134 IrvLq~~l~~q~skIQRLE~dI 155 (491)
T 1m1j_A 134 IKALQNSIQEQVVEMKRLEVDI 155 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555555555555555
No 303
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=83.84 E-value=26 Score=32.16 Aligned_cols=155 Identities=15% Similarity=0.135 Sum_probs=81.0
Q ss_pred eeEEEECCEEEEEcccCCCcccCcEEEEEccCC--eEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEcc
Q 006645 189 HGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSW--AWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGH 264 (637)
Q Consensus 189 ~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~ 264 (637)
=|++.+.+++|+|=| +-+|+++.... ........... +.+|. ... ++... ++++|+|-|.
T Consensus 10 DAi~~~~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~w-------~glP~-~ID-Aa~~~~~~~~~yfFkG~ 73 (195)
T 1itv_A 10 DAIAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADKW-------PALPR-KLD-SVFEEPLSKKLFFFSGR 73 (195)
T ss_dssp SEEEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHHC-------TTSCS-SCS-EEEECTTTCCEEEEETT
T ss_pred CEEEEeCCEEEEEEC-------CEEEEEECCccccCCCcEEhhhcc-------CCCCC-Ccc-EEEEECCCCeEEEEeCC
Confidence 345668999999987 46788876552 22221111000 11222 222 22233 6789999884
Q ss_pred CCCCCcceeEEEEECCCCce-EeeccCCCCCCC--CCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceE-----
Q 006645 265 TKDPSEIIQVKVFDLQTCSW-STLKTYGKPPVS--RGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWD----- 336 (637)
Q Consensus 265 ~~~~~~~~~v~~yd~~t~~W-~~~~~~g~~p~~--r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~----- 336 (637)
..|+|+..+..- ..+...| .|.. ....+....++++|+|-| +..|+||..+.+-.
T Consensus 74 --------~yw~~~~~~~~~Pk~i~~~G-~p~~~~~iDAA~~~~~g~~yfFkg--------~~ywr~d~~~~~~~~gyPr 136 (195)
T 1itv_A 74 --------QVWVYTGASVLGPRRLDKLG-LGADVAQVTGALRSGRGKMLLFSG--------RRLWRFDVKAQMVDPRSAS 136 (195)
T ss_dssp --------EEEEEETTEEEEEEEGGGGT-CCTTCCCCCEEEECSTTEEEEEET--------TEEEEEETTTTEECGGGCE
T ss_pred --------EEEEEcCCccCCCEEeeecc-cCCCccceeEEEEcCCCeEEEEeC--------CEEEEEeCCcccccCCCcc
Confidence 567777543211 1111112 2321 222222222579999976 35799998765321
Q ss_pred Eec-CCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCee
Q 006645 337 EID-AVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEW 386 (637)
Q Consensus 337 ~~~-~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W 386 (637)
.+. .-. -.|..-.++... ++.+|+|-|. ..|.||..+..-
T Consensus 137 ~i~~~w~--Gvp~~idaa~~~-~g~~Yffkg~-------~y~~~~~~~~~v 177 (195)
T 1itv_A 137 EVDRMFP--GVPLDTHDVFQF-REKAYFCQDR-------FYWRVSSRSELN 177 (195)
T ss_dssp EHHHHST--TSCSSCSEEEEE-TTEEEEEETT-------EEEEEECCTTCC
T ss_pred ChhhcCC--CCCCCCCEEEEe-CCeEEEEeCC-------EEEEEECCccEE
Confidence 111 000 112223345555 4789999884 578999876653
No 304
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=83.75 E-value=26 Score=38.07 Aligned_cols=198 Identities=12% Similarity=0.083 Sum_probs=101.7
Q ss_pred CcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe-CC-EEEEEEccCCCCCcceeEEEEECCCCceEeec
Q 006645 211 SDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW-EN-KLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLK 288 (637)
Q Consensus 211 ~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~-~~-~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 288 (637)
+.++..|..+.....+... +.++.-|....- ++ ++|+... ..+.|.++|+.+++-...-
T Consensus 320 g~v~~vd~~~~~~~~v~~i-------------~~~~~~~d~~~~pdgr~~~va~~------~sn~V~ViD~~t~kl~~~i 380 (567)
T 1qks_A 320 GKILLVDYTDLNNLKTTEI-------------SAERFLHDGGLDGSHRYFITAAN------ARNKLVVIDTKEGKLVAIE 380 (567)
T ss_dssp TEEEEEETTCSSEEEEEEE-------------ECCSSEEEEEECTTSCEEEEEEG------GGTEEEEEETTTTEEEEEE
T ss_pred CeEEEEecCCCccceeeee-------------eccccccCceECCCCCEEEEEeC------CCCeEEEEECCCCcEEEEE
Confidence 4677888777654443332 234444444333 33 4555443 2457999999998765554
Q ss_pred cC-CCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCc-----eEEecCCCCCCCcccccEEEEE-cCC
Q 006645 289 TY-GKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMT-----WDEIDAVGVPPSPRSDHAAAVH-AER 359 (637)
Q Consensus 289 ~~-g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~-----W~~~~~~~~~p~~r~~h~~~~~-~~~ 359 (637)
+. |..|.+-.+... .. ++.+|+.+-.. .+.|.++|..+.. |+.+....... .... .+... ++.
T Consensus 381 ~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g-----~~~Vsvid~~~~~~~~~~~kvv~~i~~~g-~g~~-~i~~~p~~~ 452 (567)
T 1qks_A 381 DTGGQTPHPGRGANF-VHPTFGPVWATSHMG-----DDSVALIGTDPEGHPDNAWKILDSFPALG-GGSL-FIKTHPNSQ 452 (567)
T ss_dssp ECSSSSBCCTTCEEE-EETTTEEEEEEEBSS-----SSEEEEEECCTTTCTTTBTSEEEEEECSC-SCCC-CEECCTTCS
T ss_pred eccCcCCCCccceee-ECCCCCcEEEeCCCC-----CCeEEEecCCCCCCccccCEEEEEEecCC-CCCE-EEEeCCCCC
Confidence 55 566665434332 23 35677765321 2468899887633 87665431111 1111 12222 345
Q ss_pred EEEEEeCCCC-CCCcCcEEEEECCCC-------eeEecccC--CCCC--CCCcccEEEEECCccccceeeeeeccCCCCE
Q 006645 360 YLLIFGGGSH-AACFNDLHVLDLQTM-------EWSRPTQQ--GEIP--TPRAGHAGVTIGENWFLGLSLVVSSYSGEDV 427 (637)
Q Consensus 360 ~l~v~GG~~~-~~~~~dl~~~d~~t~-------~W~~l~~~--~~~p--~~R~~hs~~~~~~~~yiG~s~~~~~~~g~~~ 427 (637)
+|||---.+. ....+.|.+||+.+. .+..+++. ..++ ..|..|....- .++.
T Consensus 453 ~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~G~~ 516 (567)
T 1qks_A 453 YLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNK----------------DGTE 516 (567)
T ss_dssp EEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECT----------------TSSE
T ss_pred eEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECC----------------CCCE
Confidence 7888542221 112467999998765 23333210 0111 22333322211 1346
Q ss_pred EEEEcCCCCCCcccEEEEeCCCCc
Q 006645 428 IVAFGGYNGRYNNEVHVLKPSHKS 451 (637)
Q Consensus 428 l~v~GG~~~~~~~~v~~~d~~~~~ 451 (637)
+++--+......+.|.++|..+..
T Consensus 517 ~~~s~~~~~~~~~~i~v~D~~t~~ 540 (567)
T 1qks_A 517 VWFSVWNGKDQESALVVVDDKTLE 540 (567)
T ss_dssp EEEEEECCTTSCCEEEEEETTTTE
T ss_pred EEEEeecCCCCCCcEEEEECCCce
Confidence 766522222356889999988764
No 305
>4b6x_A AVRRPS4, avirulence protein; toxin, type 3 secreted effector; 2.20A {Pseudomonas syringae PV}
Probab=83.56 E-value=10 Score=28.87 Aligned_cols=24 Identities=25% Similarity=0.382 Sum_probs=11.9
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHH
Q 006645 540 LKQDLTEAESQNTDLYKELQSVRG 563 (637)
Q Consensus 540 l~~~l~e~e~~~~~~~~elq~~~~ 563 (637)
|+++|++++.-.+.+.+|||+-+.
T Consensus 27 lrq~I~DKQ~~i~~Lt~eLq~A~~ 50 (90)
T 4b6x_A 27 LRQEIEDKQLMVNNLTDELQDAID 50 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555555555555554433
No 306
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=83.48 E-value=56 Score=35.70 Aligned_cols=80 Identities=10% Similarity=0.095 Sum_probs=44.4
Q ss_pred EEE--ECCE----EEEEcccCCCcccCcEEEEEccCCe--EEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEE
Q 006645 191 AAV--VQDK----MYIYGGNHNGRYLSDMHILDLRSWA--WSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIA 262 (637)
Q Consensus 191 ~~~--~~~~----lyv~GG~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~G 262 (637)
.++ .++. ||+... ...++.+|..|++ |+.-.... . .......+-+..++.||+-.
T Consensus 111 ~av~p~~g~~~~rV~v~t~------dg~l~AlDa~TG~~~W~~~~~~~----------~-~~~~~~ssP~v~~g~V~vg~ 173 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQL------DGNVAALNAETGETVWKVENSDI----------K-VGSTLTIAPYVVKDKVIIGS 173 (599)
T ss_dssp CEEECCCSSSCCEEEEECT------TSEEEEEETTTCCEEEEEECCCG----------G-GTCBCCSCCEEETTEEEECC
T ss_pred eEEEecCCcceeEEEEEcC------CCEEEEEECCCCCEEEeecCCCC----------C-ccceeecCCEEECCEEEEEe
Confidence 444 5676 887643 2469999998864 87532110 0 00011122344688887643
Q ss_pred ccCCCCCcceeEEEEECCCCc--eEeec
Q 006645 263 GHTKDPSEIIQVKVFDLQTCS--WSTLK 288 (637)
Q Consensus 263 G~~~~~~~~~~v~~yd~~t~~--W~~~~ 288 (637)
+.. .......++.||..|++ |+.-.
T Consensus 174 ~g~-e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 174 SGA-ELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp BCG-GGTCCCEEEEEETTTCCEEEEEES
T ss_pred ccc-ccCCCCeEEEEECCCCcEEEEEcC
Confidence 311 11123579999998865 87653
No 307
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=83.47 E-value=40 Score=33.92 Aligned_cols=109 Identities=17% Similarity=0.127 Sum_probs=58.4
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCc--eEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEEC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCS--WSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDL 330 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~ 330 (637)
++.+++.|+.+. .+.+||+.... -..+.. ......++.+ ++..++.|+.+ ..+.+||+
T Consensus 217 ~~~~l~sgs~D~------~v~~wd~~~~~~~~~~~~~------h~~~v~~v~~~p~~~~l~s~s~D------~~i~lwd~ 278 (380)
T 3iz6_a 217 NANMFISGSCDT------TVRLWDLRITSRAVRTYHG------HEGDINSVKFFPDGQRFGTGSDD------GTCRLFDM 278 (380)
T ss_dssp SCCEEEEEETTS------CEEEEETTTTCCCCEEECC------CSSCCCEEEECTTSSEEEEECSS------SCEEEEET
T ss_pred CCCEEEEEECCC------eEEEEECCCCCcceEEECC------cCCCeEEEEEecCCCeEEEEcCC------CeEEEEEC
Confidence 567888888755 47888876321 111110 1111122333 55777888764 34889999
Q ss_pred CCCceEEecCCCCCC---CcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCee
Q 006645 331 ETMTWDEIDAVGVPP---SPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEW 386 (637)
Q Consensus 331 ~t~~W~~~~~~~~~p---~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W 386 (637)
.+..-...-...... ....-.+++...++.+++.|+.+ ..+.+||+.+..-
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-----g~i~vwd~~~~~~ 332 (380)
T 3iz6_a 279 RTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN-----GDCYVWDTLLAEM 332 (380)
T ss_dssp TTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT-----SCEEEEETTTCCE
T ss_pred CCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC-----CCEEEEECCCCce
Confidence 876543332110000 00112344444556677777653 3588999876654
No 308
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=82.75 E-value=60 Score=35.47 Aligned_cols=128 Identities=19% Similarity=0.205 Sum_probs=69.9
Q ss_pred eeEEEECCEEEEEcccCCCcccCcEEEEEc-cCC--eEEEeeecccccCCCCCCCCCCCCcc---cceEEE--eCCE---
Q 006645 189 HGAAVVQDKMYIYGGNHNGRYLSDMHILDL-RSW--AWSKIQAKAVAESTESPSPALLTPCA---GHSLIP--WENK--- 257 (637)
Q Consensus 189 ~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~-~t~--~W~~~~~~~~~~~~~~~~~~~p~~r~---~hs~v~--~~~~--- 257 (637)
.+-+++++.||+.+.. .+.++.||. .|+ .|+.-..... ...+..++ ..+.+. .+++
T Consensus 56 ~tP~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~--------~~~~~~~~~~~~~g~av~p~~g~~~~ 122 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNP--------AARAVACCDLVNRGLAYWPGDGKTPA 122 (599)
T ss_dssp SCCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCG--------GGGGGCSSCSCCCCCEEECCCSSSCC
T ss_pred eccEEECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCc--------cccccccccccccceEEEecCCccee
Confidence 4556789999998752 246999999 775 5876432210 00000111 122334 4666
Q ss_pred -EEEEEccCCCCCcceeEEEEECCCCc--eEeeccCCCCCCC-CCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCC
Q 006645 258 -LLSIAGHTKDPSEIIQVKVFDLQTCS--WSTLKTYGKPPVS-RGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETM 333 (637)
Q Consensus 258 -lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~g~~p~~-r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~ 333 (637)
||+... ...++++|..|++ |+.-... .... ....+-++.++.+|+-.+... ......|+.||..|.
T Consensus 123 rV~v~t~-------dg~l~AlDa~TG~~~W~~~~~~--~~~~~~~~ssP~v~~g~V~vg~~g~e-~g~~g~v~A~D~~TG 192 (599)
T 1w6s_A 123 LILKTQL-------DGNVAALNAETGETVWKVENSD--IKVGSTLTIAPYVVKDKVIIGSSGAE-LGVRGYLTAYDVKTG 192 (599)
T ss_dssp EEEEECT-------TSEEEEEETTTCCEEEEEECCC--GGGTCBCCSCCEEETTEEEECCBCGG-GTCCCEEEEEETTTC
T ss_pred EEEEEcC-------CCEEEEEECCCCCEEEeecCCC--CCccceeecCCEEECCEEEEEecccc-cCCCCeEEEEECCCC
Confidence 776432 2368999988875 8764221 1000 111122456887776432111 112457999999876
Q ss_pred c--eEEec
Q 006645 334 T--WDEID 339 (637)
Q Consensus 334 ~--W~~~~ 339 (637)
+ |+.-.
T Consensus 193 ~~~W~~~~ 200 (599)
T 1w6s_A 193 EQVWRAYA 200 (599)
T ss_dssp CEEEEEES
T ss_pred cEEEEEcC
Confidence 4 87654
No 309
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=82.74 E-value=37 Score=33.11 Aligned_cols=107 Identities=14% Similarity=0.108 Sum_probs=59.8
Q ss_pred CEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE---CCEEEEEeCCCCCCCCCCceEEEECCC
Q 006645 256 NKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV---GTSLVIFGGEDAKRSLLNDLHILDLET 332 (637)
Q Consensus 256 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~n~i~~yd~~t 332 (637)
+.+++.|+.++ .+.+||+.+..-...-. .......++.+ ++.+++.|+.+ ..|.+||+.+
T Consensus 85 ~~~l~~~~~dg------~i~v~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~l~s~~~d------g~i~iwd~~~ 147 (366)
T 3k26_A 85 HPLLAVAGSRG------IIRIINPITMQCIKHYV-----GHGNAINELKFHPRDPNLLLSVSKD------HALRLWNIQT 147 (366)
T ss_dssp CEEEEEEETTC------EEEEECTTTCCEEEEEE-----SCCSCEEEEEECSSCTTEEEEEETT------SCEEEEETTT
T ss_pred CCEEEEecCCC------EEEEEEchhceEeeeec-----CCCCcEEEEEECCCCCCEEEEEeCC------CeEEEEEeec
Confidence 57788887643 58899988765433211 11112223333 45677777753 4589999988
Q ss_pred CceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 333 MTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 333 ~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
.+-...-.. .......-.+++...++..++.|+.+ ..+.+||+.+..
T Consensus 148 ~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~ 194 (366)
T 3k26_A 148 DTLVAIFGG-VEGHRDEVLSADYDLLGEKIMSCGMD-----HSLKLWRINSKR 194 (366)
T ss_dssp TEEEEEECS-TTSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESCSHH
T ss_pred CeEEEEecc-cccccCceeEEEECCCCCEEEEecCC-----CCEEEEECCCCc
Confidence 765443210 00112222334444455577777754 358889987653
No 310
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=82.71 E-value=4.2 Score=32.37 Aligned_cols=23 Identities=26% Similarity=0.203 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHH
Q 006645 537 SIQLKQDLTEAESQNTDLYKELQ 559 (637)
Q Consensus 537 ~~~l~~~l~e~e~~~~~~~~elq 559 (637)
+..|..+|+.++.++.+++.++.
T Consensus 24 le~le~~Ie~LE~~i~~le~~la 46 (89)
T 2lw1_A 24 LEQLPQLLEDLEAKLEALQTQVA 46 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455555555555555555554
No 311
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=82.57 E-value=18 Score=36.73 Aligned_cols=152 Identities=11% Similarity=0.145 Sum_probs=77.1
Q ss_pred EEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcceeE
Q 006645 197 KMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEIIQV 274 (637)
Q Consensus 197 ~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~~v 274 (637)
.+++.|+.+ ..+.++|+.+.+....-... ... ....++.+ ++.+++.|+.++ .+
T Consensus 145 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~------------~~~-~~v~~~~~~~~~~~l~~~~~d~------~i 200 (402)
T 2aq5_A 145 NVLLSAGCD-----NVILVWDVGTGAAVLTLGPD------------VHP-DTIYSVDWSRDGALICTSCRDK------RV 200 (402)
T ss_dssp TEEEEEETT-----SCEEEEETTTTEEEEEECTT------------TCC-SCEEEEEECTTSSCEEEEETTS------EE
T ss_pred CEEEEEcCC-----CEEEEEECCCCCccEEEecC------------CCC-CceEEEEECCCCCEEEEEecCC------cE
Confidence 477777643 35889999988654332100 011 11223333 567777777543 58
Q ss_pred EEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCce--EEecCCCCCCCcccccE
Q 006645 275 KVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTW--DEIDAVGVPPSPRSDHA 352 (637)
Q Consensus 275 ~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W--~~~~~~~~~p~~r~~h~ 352 (637)
.+||+.+..-...-..+ ....+....+..-++.+++.|.... ....+.+||+.+..- ..... .....-.+
T Consensus 201 ~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~~~~---~d~~i~iwd~~~~~~~~~~~~~----~~~~~v~~ 272 (402)
T 2aq5_A 201 RVIEPRKGTVVAEKDRP-HEGTRPVHAVFVSEGKILTTGFSRM---SERQVALWDTKHLEEPLSLQEL----DTSSGVLL 272 (402)
T ss_dssp EEEETTTTEEEEEEECS-SCSSSCCEEEECSTTEEEEEEECTT---CCEEEEEEETTBCSSCSEEEEC----CCCSSCEE
T ss_pred EEEeCCCCceeeeeccC-CCCCcceEEEEcCCCcEEEEeccCC---CCceEEEEcCccccCCceEEec----cCCCceeE
Confidence 99999887654332111 1111111122222567777763211 135689999876442 11111 11111223
Q ss_pred EEEEc-CCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 353 AAVHA-ERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 353 ~~~~~-~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
++... ++.|++.|+.+ ..|.+||+.+..
T Consensus 273 ~~~s~~~~~l~~~g~~d-----g~i~i~d~~~~~ 301 (402)
T 2aq5_A 273 PFFDPDTNIVYLCGKGD-----SSIRYFEITSEA 301 (402)
T ss_dssp EEEETTTTEEEEEETTC-----SCEEEEEECSST
T ss_pred EEEcCCCCEEEEEEcCC-----CeEEEEEecCCC
Confidence 33433 45566666543 358888887665
No 312
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=82.45 E-value=8.5 Score=34.82 Aligned_cols=8 Identities=38% Similarity=0.210 Sum_probs=3.0
Q ss_pred HHHHHHHH
Q 006645 558 LQSVRGQL 565 (637)
Q Consensus 558 lq~~~~ql 565 (637)
+...+.+|
T Consensus 94 l~akr~EL 101 (175)
T 3lay_A 94 LISKRYEY 101 (175)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 313
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=82.33 E-value=25 Score=33.81 Aligned_cols=161 Identities=12% Similarity=0.011 Sum_probs=82.9
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEE----EccC-----
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSI----AGHT----- 265 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~----GG~~----- 265 (637)
++.||+.... ...+++||+.+++...+.... ...+..+....++.-+++||+. |...
T Consensus 79 dg~l~v~~~~-----~~~i~~~d~~~g~~~~~~~~~---------~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~ 144 (296)
T 3e5z_A 79 QGHLIACSHG-----LRRLERQREPGGEWESIADSF---------EGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGY 144 (296)
T ss_dssp TCCEEEEETT-----TTEEEEECSTTCCEEEEECEE---------TTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSS
T ss_pred CCcEEEEecC-----CCeEEEEcCCCCcEEEEeecc---------CCCCCCCCCCEEECCCCCEEEECCccccccccccc
Confidence 5678776431 146899999888877664321 0011112222233336788886 4321
Q ss_pred -C-CCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE-CCEEEEEeCCCCCCCCCCceEEEECC-CCce-EEecC
Q 006645 266 -K-DPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GTSLVIFGGEDAKRSLLNDLHILDLE-TMTW-DEIDA 340 (637)
Q Consensus 266 -~-~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~n~i~~yd~~-t~~W-~~~~~ 340 (637)
. .......++.||+. +....+... ...+ .+++.. ++++++.+.. .+.|++||+. +.+. .....
T Consensus 145 ~~~~~~~~~~l~~~~~~-g~~~~~~~~--~~~~---~gi~~s~dg~~lv~~~~------~~~i~~~~~~~~g~~~~~~~~ 212 (296)
T 3e5z_A 145 GGEMELPGRWVFRLAPD-GTLSAPIRD--RVKP---NGLAFLPSGNLLVSDTG------DNATHRYCLNARGETEYQGVH 212 (296)
T ss_dssp CCCCCSSSCEEEEECTT-SCEEEEECC--CSSE---EEEEECTTSCEEEEETT------TTEEEEEEECSSSCEEEEEEE
T ss_pred cccccCCCcEEEEECCC-CCEEEeecC--CCCC---ccEEECCCCCEEEEeCC------CCeEEEEEECCCCcCcCCCeE
Confidence 0 01123479999987 555554321 1111 222222 4555544432 3579999986 5555 21111
Q ss_pred CCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecc
Q 006645 341 VGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPT 390 (637)
Q Consensus 341 ~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~ 390 (637)
. ... ...-.++++..++.|||..+ +.|.+||+.......+.
T Consensus 213 ~-~~~-~~~p~~i~~d~~G~l~v~~~-------~~v~~~~~~g~~~~~~~ 253 (296)
T 3e5z_A 213 F-TVE-PGKTDGLRVDAGGLIWASAG-------DGVHVLTPDGDELGRVL 253 (296)
T ss_dssp E-CCS-SSCCCSEEEBTTSCEEEEET-------TEEEEECTTSCEEEEEE
T ss_pred e-eCC-CCCCCeEEECCCCCEEEEcC-------CeEEEECCCCCEEEEEE
Confidence 1 011 11112455555677888762 45899999866555553
No 314
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=82.26 E-value=15 Score=28.21 Aligned_cols=21 Identities=19% Similarity=0.495 Sum_probs=8.1
Q ss_pred hhHHHHHHHHHHHHhHHHHHH
Q 006645 574 KLEVDVAELRQKLQTMETLQK 594 (637)
Q Consensus 574 ~le~~~~el~~~lq~~q~~~~ 594 (637)
+|+++..+++..++.++++.+
T Consensus 50 ~l~~E~~~l~~ni~~lk~K~~ 70 (78)
T 3iv1_A 50 RLDQEVAEVDKNIELLKKKDE 70 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333444444433333333333
No 315
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=82.17 E-value=35 Score=37.68 Aligned_cols=109 Identities=7% Similarity=0.058 Sum_probs=55.4
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLET 332 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t 332 (637)
++.+++.|+.+. .|.++|+.++.-...-. .......++.+ ++..++.|+.+ ..|.+||+..
T Consensus 441 ~g~~l~sgs~Dg------~v~vwd~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~s~D------~~i~iwd~~~ 503 (694)
T 3dm0_A 441 DGQFALSGSWDG------ELRLWDLAAGVSTRRFV-----GHTKDVLSVAFSLDNRQIVSASRD------RTIKLWNTLG 503 (694)
T ss_dssp TSSEEEEEETTS------EEEEEETTTTEEEEEEE-----CCSSCEEEEEECTTSSCEEEEETT------SCEEEECTTS
T ss_pred CCCEEEEEeCCC------cEEEEECCCCcceeEEe-----CCCCCEEEEEEeCCCCEEEEEeCC------CEEEEEECCC
Confidence 567777777653 58899988765433211 01111222223 45666777654 3477887655
Q ss_pred CceEEecCCCCCCCcccc-cEEEEEcCC--EEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 333 MTWDEIDAVGVPPSPRSD-HAAAVHAER--YLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 333 ~~W~~~~~~~~~p~~r~~-h~~~~~~~~--~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
..-..+...+ ...+.. .+++...++ .+++.|+.+ ..|.+||+.+..-.
T Consensus 504 ~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~l~s~s~d-----~~v~vwd~~~~~~~ 554 (694)
T 3dm0_A 504 ECKYTISEGG--EGHRDWVSCVRFSPNTLQPTIVSASWD-----KTVKVWNLSNCKLR 554 (694)
T ss_dssp CEEEEECSST--TSCSSCEEEEEECSCSSSCEEEEEETT-----SCEEEEETTTCCEE
T ss_pred CcceeeccCC--CCCCCcEEEEEEeCCCCcceEEEEeCC-----CeEEEEECCCCcEE
Confidence 4332332111 111111 122222222 366667654 35888998776543
No 316
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=82.16 E-value=47 Score=33.81 Aligned_cols=158 Identities=11% Similarity=0.083 Sum_probs=81.4
Q ss_pred eeEEEECCEEEEEcccCCCcccCcEEEEEccCCeE--EEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEcc
Q 006645 189 HGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSWAW--SKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGH 264 (637)
Q Consensus 189 ~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W--~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~ 264 (637)
-+++.+.+++|+|=| +-+|+++.....- ..+... . +.+| .... ++... ++++|+|-|.
T Consensus 184 DAv~~~~g~~~fFkg-------~~~Wr~~~~~~~~~p~~I~~~------w---pgLP-~~iD-Aa~~~~~~g~~~fFkg~ 245 (365)
T 3ba0_A 184 DAVTTVGNKIFFFKD-------RFFWLKVSERPKTSVNLISSL------W---PTLP-SGIE-AAYEIEARNQVFLFKDD 245 (365)
T ss_dssp SCEEEETTEEEEEET-------TEEEECCSSCCCCCEEEHHHH------C---SSCC-SSCC-EEEEEGGGTEEEEEETT
T ss_pred eeEEEcCCeEEEEeC-------CEEEEEcCCCccCCccchhhh------c---cCCC-CCcc-EEEEecCCCEEEEEeCC
Confidence 345667999999977 3466665443221 111110 0 1223 2222 22233 7899999874
Q ss_pred CCCCCcceeEEEEECCCCc--e-EeeccCCCCCCC-CCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEe
Q 006645 265 TKDPSEIIQVKVFDLQTCS--W-STLKTYGKPPVS-RGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEI 338 (637)
Q Consensus 265 ~~~~~~~~~v~~yd~~t~~--W-~~~~~~g~~p~~-r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~ 338 (637)
..|+|+..+.. + ..++..| .|.. ..--++... ++++|+|-| +..|+||..+.+-..-
T Consensus 246 --------~yWr~~~~~~~~gyPk~I~~~G-lP~~~~~IDAA~~~~~~~~~yfFkG--------~~yw~yd~~~~~v~~g 308 (365)
T 3ba0_A 246 --------KYWLISNLRPEPNYPKSIHSFG-FPNFVKKIDAAVFNPRFYRTYFFVD--------NQYWRYDERRQMMDPG 308 (365)
T ss_dssp --------EEEECSTTSCTTTCSEETTTTT-CCTTCCCCCEEEEETTTTEEEEEET--------TEEEEEETTTTEECSS
T ss_pred --------EEEEEcCCcccCCCCceeeecc-CCCCCCCcCEEEEeCCCCEEEEEEC--------CEEEEEeCCcceecCC
Confidence 46777643221 1 1222212 2321 112233333 479999976 4589999766532210
Q ss_pred cCC----CCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEe
Q 006645 339 DAV----GVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSR 388 (637)
Q Consensus 339 ~~~----~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~ 388 (637)
-+. +-+..|..-.++....++++|+|=|. ..|.||..+..-..
T Consensus 309 yPk~I~~~f~g~p~~iDaA~~~~~g~~YfFkg~-------~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 309 YPKLITKNFQGIGPKIDAVFYSKNKYYYFFQGS-------NQFEYDFLLQRITK 355 (365)
T ss_dssp CCCCHHHHSTTCCSSCSEEEEETTTEEEEEETT-------EEEEEETTTTEEEE
T ss_pred CCcchhhcCCCCCCccceeeEecCCcEEEEeCC-------EEEEEECCccEEec
Confidence 000 00112222334555546789999873 58999998876554
No 317
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=82.13 E-value=20 Score=37.73 Aligned_cols=157 Identities=11% Similarity=0.046 Sum_probs=80.4
Q ss_pred eEEEECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEE--eCCEEEEEEccCCC
Q 006645 190 GAAVVQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIP--WENKLLSIAGHTKD 267 (637)
Q Consensus 190 a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~--~~~~lyv~GG~~~~ 267 (637)
+++.+.+.+|+|-| +-+|+++.....+......... +.+|.. .. ++.. .++++|+|=|.
T Consensus 267 Ai~~~~ge~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~W-------p~LP~~-iD-Aa~~~~~~g~~~fFKg~--- 327 (450)
T 1su3_A 267 AITTIRGEVMFFKD-------RFYMRTNPFYPEVELNFISVFW-------PQLPNG-LE-AAYEFADRDEVRFFKGN--- 327 (450)
T ss_dssp EEEEETTEEEEEET-------TEEEECCTTSSSCEEEEGGGTC-------TTSCSS-CC-EEEEEGGGTEEEEEETT---
T ss_pred eEEecCCeEEEEeC-------CEEEEEcCCCCcccceehhHhc-------cCCCCC-ee-EEEEEcCCCeEEEEeCC---
Confidence 56678999999988 3466666554443322211100 112221 22 2222 26899999875
Q ss_pred CCcceeEEEEECCCCc--e-Eeec-cCCCCCC-CCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceE----
Q 006645 268 PSEIIQVKVFDLQTCS--W-STLK-TYGKPPV-SRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWD---- 336 (637)
Q Consensus 268 ~~~~~~v~~yd~~t~~--W-~~~~-~~g~~p~-~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~---- 336 (637)
.+|+|+..+.. + ..+. ..| .|. +..--++... ++++|+|=| +..|+||..+.+-.
T Consensus 328 -----~~W~~~~~~~~~gyP~~i~~~~g-~P~~~~~IDAA~~~~~~~k~yfFkG--------~~yw~yd~~~~~~~~gYP 393 (450)
T 1su3_A 328 -----KYWAVQGQNVLHGYPKDIYSSFG-FPRTVKHIDAALSEENTGKTYFFVA--------NKYWRYDEYKRSMDPGYP 393 (450)
T ss_dssp -----EEEEEETTEECTTCSEEHHHHHC-CCTTCCCCCEEEEETTTTEEEEEET--------TEEEEEETTTTEECSSCS
T ss_pred -----EEEEecCCcccCCCceeeehhhc-CCCCCCccceEEEEcCCCeEEEEeC--------CEEEEEeCCCccccCCCC
Confidence 46777643210 0 1111 112 221 1111123333 579999976 45899987654321
Q ss_pred -EecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEe
Q 006645 337 -EIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSR 388 (637)
Q Consensus 337 -~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~ 388 (637)
.+.. +-+-.|..-.++.. .++++|+|-|. ..|.||..+..-..
T Consensus 394 k~I~~-~fpgip~~iDAA~~-~~g~~YFFkg~-------~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 394 KMIAH-DFPGIGHKVDAVFM-KDGFFYFFHGT-------RQYKFDPKTKRILT 437 (450)
T ss_dssp EEHHH-HSTTSCSCCSEEEE-ETTEEEEEETT-------EEEEEETTTTEEEE
T ss_pred cchhh-cCCCCCCCccEEEE-cCCeEEEEeCC-------EEEEEECCcceEec
Confidence 1110 00011222223433 46789999884 58999988776543
No 318
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=82.07 E-value=39 Score=32.79 Aligned_cols=104 Identities=13% Similarity=0.120 Sum_probs=52.4
Q ss_pred CCE-EEEEEccCCCCCcceeEEEEEC-CCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCC
Q 006645 255 ENK-LLSIAGHTKDPSEIIQVKVFDL-QTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLET 332 (637)
Q Consensus 255 ~~~-lyv~GG~~~~~~~~~~v~~yd~-~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t 332 (637)
++. +++.|+.++ .+.+||+ .+.....+.. .+....-.++....+.+++.|+.+ +.+.+||+.+
T Consensus 67 ~~~~~l~~~~~dg------~i~~wd~~~~~~~~~~~~---~~~~~~v~~l~~~~~~~l~s~~~d------~~i~iwd~~~ 131 (342)
T 1yfq_A 67 NTDLQIYVGTVQG------EILKVDLIGSPSFQALTN---NEANLGICRICKYGDDKLIAASWD------GLIEVIDPRN 131 (342)
T ss_dssp SSSEEEEEEETTS------CEEEECSSSSSSEEECBS---CCCCSCEEEEEEETTTEEEEEETT------SEEEEECHHH
T ss_pred CCCcEEEEEcCCC------eEEEEEeccCCceEeccc---cCCCCceEEEEeCCCCEEEEEcCC------CeEEEEcccc
Confidence 566 777777643 5889999 8876654432 001111122222225566666643 4578887654
Q ss_pred Cc-------eEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCC
Q 006645 333 MT-------WDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQT 383 (637)
Q Consensus 333 ~~-------W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t 383 (637)
.. ...+... ..+..-.++.. ..+. ++.|+.+ ..+.+||+.+
T Consensus 132 ~~~~~~~~~~~~~~~~---~~~~~v~~~~~-~~~~-l~~~~~d-----~~i~i~d~~~ 179 (342)
T 1yfq_A 132 YGDGVIAVKNLNSNNT---KVKNKIFTMDT-NSSR-LIVGMNN-----SQVQWFRLPL 179 (342)
T ss_dssp HTTBCEEEEESCSSSS---SSCCCEEEEEE-CSSE-EEEEEST-----TEEEEEESSC
T ss_pred cccccccccCCeeeEE---eeCCceEEEEe-cCCc-EEEEeCC-----CeEEEEECCc
Confidence 00 1111111 11222223333 3444 5555543 3588999887
No 319
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=82.03 E-value=4 Score=37.01 Aligned_cols=12 Identities=25% Similarity=0.365 Sum_probs=4.8
Q ss_pred hhHHHHHHHHHH
Q 006645 574 KLEVDVAELRQK 585 (637)
Q Consensus 574 ~le~~~~el~~~ 585 (637)
.|.+++.+|+++
T Consensus 117 aL~~Ei~~Lr~q 128 (175)
T 3lay_A 117 AVAKEMESLGQK 128 (175)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333444444333
No 320
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=81.89 E-value=19 Score=29.12 Aligned_cols=23 Identities=22% Similarity=0.118 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 006645 592 LQKELELLQRQKAASEQAALNAK 614 (637)
Q Consensus 592 ~~~e~~~~~~~~~~~~~~~~~~~ 614 (637)
+.+....++.+...+..+|.+++
T Consensus 63 ~Kr~~~~L~~~~~~lk~~L~qRD 85 (103)
T 4h22_A 63 EKHAHSILQFQFAEVKEALKQRE 85 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444455555555555565554
No 321
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=81.87 E-value=17 Score=28.61 Aligned_cols=48 Identities=23% Similarity=0.279 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHh----HHHHHHHHHHHHHHHHH
Q 006645 558 LQSVRGQLAAEQSRCFKLEVDVAELRQKLQT----METLQKELELLQRQKAA 605 (637)
Q Consensus 558 lq~~~~ql~~~q~~~~~le~~~~el~~~lq~----~q~~~~e~~~~~~~~~~ 605 (637)
+...+...+.|.......|.++..|++-+.. .-+|+.+++-|++++.-
T Consensus 30 ~edfk~KyE~E~~~R~~~E~d~~~LrkdvD~a~l~r~dLE~kvesL~eEl~f 81 (86)
T 3swk_A 30 IMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAF 81 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444555666666667666666 23577777777666543
No 322
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=81.67 E-value=62 Score=36.22 Aligned_cols=157 Identities=6% Similarity=-0.032 Sum_probs=79.2
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe-CCEEEEEEccCCCCCccee
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW-ENKLLSIAGHTKDPSEIIQ 273 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~-~~~lyv~GG~~~~~~~~~~ 273 (637)
++.|+|-. . +-+++||+.++++........ ........-++++.. ++.|+| |.... -
T Consensus 383 ~g~lWigt--~-----~GL~~~~~~~~~~~~~~~~~~--------~~~~~~~~v~~i~~d~~g~lWi-gT~~~------G 440 (758)
T 3ott_A 383 EQQLWIAT--D-----GSINRYDYATRQFIHYNIVDN--------TGTYNTNWTYYIFEDTAGQLWI-STCLG------G 440 (758)
T ss_dssp TSCEEEEE--T-----TEEEEEETTTTEEEEEEEECC--------C--CBSSSEEEEEECTTSEEEE-EESSS------C
T ss_pred CCCEEEEe--C-----CcHhhcCcCCCcEEEeecCCC--------cCCCCCceEEEEEEcCCCCEEE-EECCC------c
Confidence 35677632 1 248999999999987753210 000011111223322 467877 33221 3
Q ss_pred EEEEECCC------CceE---eeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCC
Q 006645 274 VKVFDLQT------CSWS---TLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVG 342 (637)
Q Consensus 274 v~~yd~~t------~~W~---~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~ 342 (637)
+++||+.+ ..+. .......++.. ...+... ++.|+++||.. +-+++||+.+.++..+...+
T Consensus 441 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~i~~i~~d~~g~lWi~~~t~------~Gl~~~d~~~~~~~~~~~~~ 512 (758)
T 3ott_A 441 IFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGM--FINQIIPDNEGNVWVLLYNN------KGIDKINPRTREVTKLFADE 512 (758)
T ss_dssp EEEEEHHHHHHCCSSEEECSEEECGGGTCSCS--CEEEEEECTTSCEEEEETTC------SSEEEEETTTTEEEEECTTT
T ss_pred eEEEccccccccCCcceecccccccccccccc--eeeeEEEcCCCCEEEEccCC------CCcEEEeCCCCceEEecCCC
Confidence 67787653 1221 11111112211 1112222 46899877753 34899999999998874321
Q ss_pred CCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEec
Q 006645 343 VPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 343 ~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l 389 (637)
.+......+++...++.|+|-. . +.+.+||+.+..+...
T Consensus 513 -~~~~~~~~~i~~d~~g~lWigt-~------~Gl~~~~~~~~~~~~~ 551 (758)
T 3ott_A 513 -LTGEKSPNYLLCDEDGLLWVGF-H------GGVMRINPKDESQQSI 551 (758)
T ss_dssp -SCGGGCEEEEEECTTSCEEEEE-T------TEEEEECC--CCCCBC
T ss_pred -cCCCcccceEEECCCCCEEEEe-c------CceEEEecCCCceEEe
Confidence 1111122233333456688643 2 2489999988877655
No 323
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=81.63 E-value=17 Score=29.99 Aligned_cols=10 Identities=20% Similarity=0.292 Sum_probs=3.6
Q ss_pred HHHHHHHHHH
Q 006645 599 LQRQKAASEQ 608 (637)
Q Consensus 599 ~~~~~~~~~~ 608 (637)
+.+++..+++
T Consensus 90 l~~~~~~l~~ 99 (112)
T 1l8d_A 90 LERELRRIDM 99 (112)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 324
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=81.49 E-value=29 Score=34.65 Aligned_cols=112 Identities=13% Similarity=0.023 Sum_probs=58.0
Q ss_pred ceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE-CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCccc
Q 006645 271 IIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRS 349 (637)
Q Consensus 271 ~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~ 349 (637)
...++.+|+.++.-..+... .....+....- +++.++|............|+.+|+.+.....+... +....
T Consensus 167 ~~~l~~~d~~~g~~~~l~~~----~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~---~~~~~ 239 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVILQE----NQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTH---AEGES 239 (388)
T ss_dssp CEEEEEEETTTCCEEEEEEE----SSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCC---CTTEE
T ss_pred cceEEEEECCCCceEEeecC----CccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeC---CCCcc
Confidence 36899999999876666431 11122222222 345444443322222246899999988777666422 11111
Q ss_pred ccEEEEEcCCE-EEEEeCCCCCCCcCcEEEEECCCCeeEecc
Q 006645 350 DHAAAVHAERY-LLIFGGGSHAACFNDLHVLDLQTMEWSRPT 390 (637)
Q Consensus 350 ~h~~~~~~~~~-l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~ 390 (637)
....+...++. |+..... .......|+++|+.+..-..+.
T Consensus 240 ~~~~~~spdg~~l~~~~~~-~~~~~~~l~~~d~~~g~~~~l~ 280 (388)
T 3pe7_A 240 CTHEFWVPDGSALVYVSYL-KGSPDRFIYSADPETLENRQLT 280 (388)
T ss_dssp EEEEEECTTSSCEEEEEEE-TTCCCEEEEEECTTTCCEEEEE
T ss_pred cccceECCCCCEEEEEecC-CCCCcceEEEEecCCCceEEEE
Confidence 12223333443 4333322 1111124999999988766553
No 325
>2q6q_A Spindle POLE BODY component SPC42; SPC42P, budding yeast, cell cycle; 1.97A {Saccharomyces cerevisiae}
Probab=81.49 E-value=10 Score=27.82 Aligned_cols=39 Identities=28% Similarity=0.324 Sum_probs=26.5
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHH
Q 006645 562 RGQLAAEQSRCFKLEVDVAELRQKLQTMETLQKELELLQ 600 (637)
Q Consensus 562 ~~ql~~~q~~~~~le~~~~el~~~lq~~q~~~~e~~~~~ 600 (637)
..+|...|+.+++|...+-.++-+|...-++.+++|..+
T Consensus 9 ~~kl~~Kq~EI~rLnvlvgslR~KLiKYtelnKKLe~~~ 47 (74)
T 2q6q_A 9 NFKLREKQNEIFELKKIAETLRSKLEKYVDITKKLEDQN 47 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444455567777778888888888777777766544
No 326
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=81.08 E-value=48 Score=33.21 Aligned_cols=144 Identities=13% Similarity=0.043 Sum_probs=73.4
Q ss_pred CcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEE-eCCEEEEEEccCCCCCcceeEEEEECCCCceEeecc
Q 006645 211 SDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIP-WENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKT 289 (637)
Q Consensus 211 ~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~ 289 (637)
..+.++|+.+.+....-.. ..... +++. -++++++.|+. +.+.+++..++.......
T Consensus 157 ~~i~iwd~~~~~~~~~~~~--------------~~~V~-~v~fspdg~~l~s~s~-------~~~~~~~~~~~~~~~~~~ 214 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIET--------------RGEVK-DLHFSTDGKVVAYITG-------SSLEVISTVTGSCIARKT 214 (365)
T ss_dssp CEEEEEETTTTEEEEEEEC--------------SSCCC-EEEECTTSSEEEEECS-------SCEEEEETTTCCEEEEEC
T ss_pred CEEEEeECCCCcEEEEeCC--------------CCceE-EEEEccCCceEEeccc-------eeEEEEEeccCcceeeee
Confidence 3578899998775443211 11111 1222 25666666653 246677777766544322
Q ss_pred CCCCCCCCCceEEE--EECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCC
Q 006645 290 YGKPPVSRGGQSVT--LVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGG 367 (637)
Q Consensus 290 ~g~~p~~r~~~~~~--~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~ 367 (637)
. ........++ .-++..++.++.+... ...++.+|....................-.++++..++.+++.|+.
T Consensus 215 ~---~~~~~~v~~v~fspdg~~l~~~s~d~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~ 289 (365)
T 4h5i_A 215 D---FDKNWSLSKINFIADDTVLIAASLKKGK--GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASN 289 (365)
T ss_dssp C---CCTTEEEEEEEEEETTEEEEEEEESSSC--CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEET
T ss_pred c---CCCCCCEEEEEEcCCCCEEEEEecCCcc--eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcC
Confidence 1 1111112222 2367888877765432 2346667766655543321100001111223444567778888886
Q ss_pred CCCCCcCcEEEEECCCCee
Q 006645 368 SHAACFNDLHVLDLQTMEW 386 (637)
Q Consensus 368 ~~~~~~~dl~~~d~~t~~W 386 (637)
+ ..|.+||+.+..-
T Consensus 290 D-----~~V~iwd~~~~~~ 303 (365)
T 4h5i_A 290 D-----NSIALVKLKDLSM 303 (365)
T ss_dssp T-----SCEEEEETTTTEE
T ss_pred C-----CEEEEEECCCCcE
Confidence 4 3588999987654
No 327
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=81.00 E-value=44 Score=32.76 Aligned_cols=160 Identities=9% Similarity=0.127 Sum_probs=76.7
Q ss_pred EEEECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCC
Q 006645 191 AAVVQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDP 268 (637)
Q Consensus 191 ~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~ 268 (637)
++..++ +++.||.+ ..+..||+.+..+..+.... .......-.++.+ ++.+++.|+.+.
T Consensus 20 ~~~s~~-~las~~~D-----~~i~lw~~~~~~~~~~~~~~-----------~~~h~~~v~~v~~sp~~~~las~s~D~-- 80 (330)
T 2hes_X 20 FDFSQG-ILATGSTD-----RKIKLVSVKYDDFTLIDVLD-----------ETAHKKAIRSVAWRPHTSLLAAGSFDS-- 80 (330)
T ss_dssp EEEETT-EEEEEESS-----SCEEEEECSSSCCEEEEEEC-----------TTCCCSCEEEEEECTTSSEEEEEETTS--
T ss_pred eccCCC-EEEEEcCC-----CEEEEEEecCCCeEEEEEEe-----------cCCccCCEEEEEECCCCCEEEEEeCCC--
Confidence 333455 66666643 35788888876554443221 0001111223333 567777777654
Q ss_pred CcceeEEEEECCCC-----ceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCC--CceEEec
Q 006645 269 SEIIQVKVFDLQTC-----SWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLET--MTWDEID 339 (637)
Q Consensus 269 ~~~~~v~~yd~~t~-----~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t--~~W~~~~ 339 (637)
.+.+||+... .+..+.. .........++.+ ++.+++.|+.+ ..+.+||+.. ..+..+.
T Consensus 81 ----~v~iw~~~~~~~~~~~~~~~~~---~~~h~~~V~~v~~sp~g~~las~s~D------~~v~iwd~~~~~~~~~~~~ 147 (330)
T 2hes_X 81 ----TVSIWAKEESADRTFEMDLLAI---IEGHENEVKGVAWSNDGYYLATCSRD------KSVWIWETDESGEEYECIS 147 (330)
T ss_dssp ----CEEEEEC-------CCCEEEEE---EC----CEEEEEECTTSCEEEEEETT------SCEEEEECCTTCCCCEEEE
T ss_pred ----cEEEEEcccCcCccccceeEEE---EcCCCCcEEEEEECCCCCEEEEEeCC------CEEEEEeccCCCCCeEEEE
Confidence 3677776432 2222211 1111111222333 45677777754 3588888843 3444433
Q ss_pred CCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEec
Q 006645 340 AVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 340 ~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l 389 (637)
... .....-.+++...++.+++.|+.+ ..+.++|..+..|..+
T Consensus 148 ~~~--~h~~~v~~v~~~p~~~~l~s~s~D-----~~i~iW~~~~~~~~~~ 190 (330)
T 2hes_X 148 VLQ--EHSQDVKHVIWHPSEALLASSSYD-----DTVRIWKDYDDDWECV 190 (330)
T ss_dssp EEC--CCSSCEEEEEECSSSSEEEEEETT-----SCEEEEEEETTEEEEE
T ss_pred Eec--cCCCceEEEEECCCCCEEEEEcCC-----CeEEEEECCCCCeeEE
Confidence 211 011111233333455577777764 3477888777766554
No 328
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=80.79 E-value=4.7 Score=36.43 Aligned_cols=47 Identities=15% Similarity=0.245 Sum_probs=17.7
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 006645 519 LKAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQL 565 (637)
Q Consensus 519 l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql 565 (637)
++++++.-..-+.+.+.++..|.++|+.++.++..+++++++.+.+.
T Consensus 11 ~q~ql~~ad~LV~~L~~En~~L~~ql~~k~~ei~~L~~ql~sl~~~~ 57 (190)
T 4emc_A 11 VKQQIDSADLLVANLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQV 57 (190)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 33333333333444444444444444444444444444444444443
No 329
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=80.55 E-value=8.1 Score=30.51 Aligned_cols=7 Identities=29% Similarity=0.335 Sum_probs=2.7
Q ss_pred HhhhhhH
Q 006645 526 LESSLSK 532 (637)
Q Consensus 526 le~~~~e 532 (637)
++..+.+
T Consensus 15 Le~~l~e 21 (86)
T 1x8y_A 15 KEAKLRD 21 (86)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 330
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=80.42 E-value=11 Score=32.35 Aligned_cols=29 Identities=28% Similarity=0.414 Sum_probs=11.2
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 006645 540 LKQDLTEAESQNTDLYKELQSVRGQLAAE 568 (637)
Q Consensus 540 l~~~l~e~e~~~~~~~~elq~~~~ql~~~ 568 (637)
++.++.++...+.....++......+..+
T Consensus 30 l~~~l~~l~~~l~~~~~e~~~L~~~l~eE 58 (135)
T 2e7s_A 30 LKEDYNTLKRELSDRDDEVKRLREDIAKE 58 (135)
T ss_dssp HHHHHHHHHHHTTTHHHHHHTHHHHHHHT
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 33333333333333334444444444333
No 331
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=80.33 E-value=47 Score=32.67 Aligned_cols=157 Identities=11% Similarity=-0.024 Sum_probs=78.7
Q ss_pred ECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCccee
Q 006645 194 VQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQ 273 (637)
Q Consensus 194 ~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~ 273 (637)
-++.+||... +.+++||+.+++...+.... ...+..+....++.-++++|+.............
T Consensus 99 ~dg~l~v~~~-------~gl~~~d~~~g~~~~~~~~~---------~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~ 162 (326)
T 2ghs_A 99 SDSKQLIASD-------DGLFLRDTATGVLTLHAELE---------SDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGS 162 (326)
T ss_dssp ETTEEEEEET-------TEEEEEETTTCCEEEEECSS---------TTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEE
T ss_pred CCCeEEEEEC-------CCEEEEECCCCcEEEEeeCC---------CCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceE
Confidence 4678887642 34999999999887664321 0011112222222225677764322111123467
Q ss_pred EEEEECCCCceEeeccCCCCCCCCCceEEEEE-CC-EEEEEeCCCCCCCCCCceEEEECC--CC-c------eEEecCCC
Q 006645 274 VKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GT-SLVIFGGEDAKRSLLNDLHILDLE--TM-T------WDEIDAVG 342 (637)
Q Consensus 274 v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~n~i~~yd~~--t~-~------W~~~~~~~ 342 (637)
+++|| +++...+... .. .....+.. ++ .||+.... .+.|++||+. +. . +..+..
T Consensus 163 l~~~~--~g~~~~~~~~--~~---~~~~i~~s~dg~~lyv~~~~------~~~I~~~d~~~~~Gl~~~~~~~~~~~~~-- 227 (326)
T 2ghs_A 163 IYHVA--KGKVTKLFAD--IS---IPNSICFSPDGTTGYFVDTK------VNRLMRVPLDARTGLPTGKAEVFIDSTG-- 227 (326)
T ss_dssp EEEEE--TTEEEEEEEE--ES---SEEEEEECTTSCEEEEEETT------TCEEEEEEBCTTTCCBSSCCEEEEECTT--
T ss_pred EEEEe--CCcEEEeeCC--Cc---ccCCeEEcCCCCEEEEEECC------CCEEEEEEcccccCCcccCceEEEECCC--
Confidence 89998 5665554221 00 11122222 33 57776432 3579999975 44 2 222110
Q ss_pred CCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEec
Q 006645 343 VPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 343 ~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l 389 (637)
....-.++++..++.|||.... -+.|.+||+....-..+
T Consensus 228 ---~~~~p~gi~~d~~G~lwva~~~-----~~~v~~~d~~g~~~~~i 266 (326)
T 2ghs_A 228 ---IKGGMDGSVCDAEGHIWNARWG-----EGAVDRYDTDGNHIARY 266 (326)
T ss_dssp ---SSSEEEEEEECTTSCEEEEEET-----TTEEEEECTTCCEEEEE
T ss_pred ---CCCCCCeeEECCCCCEEEEEeC-----CCEEEEECCCCCEEEEE
Confidence 0111124455456667776421 13589999865444444
No 332
>3ibp_A Chromosome partition protein MUKB; structural maintenance of chromosomes, SMC, condensin, chromosome segregation, hinge, dimerization domain; 3.10A {Escherichia coli}
Probab=80.28 E-value=22 Score=34.53 Aligned_cols=28 Identities=11% Similarity=0.093 Sum_probs=10.1
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q 006645 519 LKAEKEELESSLSKEKLQSIQLKQDLTE 546 (637)
Q Consensus 519 l~~~~~~le~~~~e~~~~~~~l~~~l~e 546 (637)
|..+..+.-+...+.+++.++|++++++
T Consensus 8 l~~~~~~~~e~r~~lr~~~eql~~~i~~ 35 (302)
T 3ibp_A 8 LSDSVSNAREERMALRQEQEQLQSRIQS 35 (302)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333344444444444433
No 333
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=80.15 E-value=37 Score=37.70 Aligned_cols=146 Identities=13% Similarity=-0.000 Sum_probs=82.8
Q ss_pred CcEEEEEccCC--eEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcceeEEEEECCCC---ceE
Q 006645 211 SDMHILDLRSW--AWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQVKVFDLQTC---SWS 285 (637)
Q Consensus 211 ~~v~~yd~~t~--~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~---~W~ 285 (637)
+.++.+|+.+. .|..+... ...........++.||+....+. ....++.+|+.+. .|.
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~--------------~~~~~~~~~~~g~~l~~~t~~~~---~~~~l~~~d~~~~~~~~~~ 321 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGD--------------LDADVSLVDNKGSTLYLLTNRDA---PNRRLVTVDAANPGPAHWR 321 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECS--------------SSSCEEEEEEETTEEEEEECTTC---TTCEEEEEETTSCCGGGCE
T ss_pred cEEEEEECCCCCCceEEEeCC--------------CCceEEEEeccCCEEEEEECCCC---CCCEEEEEeCCCCCccccE
Confidence 68999998775 67776432 11111223345789999876532 2457899998773 488
Q ss_pred eeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEEE-E--cCCEEE
Q 006645 286 TLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAV-H--AERYLL 362 (637)
Q Consensus 286 ~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~-~--~~~~l~ 362 (637)
.+.+.. .. . ......++.|++..-.++ ...|+++|+.+.....+.. |... ....+ . .++.|+
T Consensus 322 ~l~~~~--~~--~-~~~s~~g~~lv~~~~~~g----~~~l~~~d~~g~~~~~l~~----p~~~--~~~~~~~~~d~~~l~ 386 (693)
T 3iuj_A 322 DLIPER--QQ--V-LTVHSGSGYLFAEYMVDA----TARVEQFDYEGKRVREVAL----PGLG--SVSGFNGKHDDPALY 386 (693)
T ss_dssp EEECCC--SS--C-EEEEEETTEEEEEEEETT----EEEEEEECTTSCEEEEECC----SSSS--EEEECCCCTTCSCEE
T ss_pred EEecCC--CC--E-EEEEEECCEEEEEEEECC----eeEEEEEECCCCeeEEeec----CCCc--eEEeeecCCCCCEEE
Confidence 764421 11 1 144445777766544322 3568999988766655531 2211 11111 1 233343
Q ss_pred EE-eCCCCCCCcCcEEEEECCCCeeEeccc
Q 006645 363 IF-GGGSHAACFNDLHVLDLQTMEWSRPTQ 391 (637)
Q Consensus 363 v~-GG~~~~~~~~dl~~~d~~t~~W~~l~~ 391 (637)
+. .+. ..-..++.||+.++.++.+..
T Consensus 387 ~~~ss~---~tP~~l~~~d~~~g~~~~l~~ 413 (693)
T 3iuj_A 387 FGFENY---AQPPTLYRFEPKSGAISLYRA 413 (693)
T ss_dssp EEEECS---SSCCEEEEECTTTCCEEEEEC
T ss_pred EEecCC---CCCCEEEEEECCCCeEEEEEe
Confidence 33 222 223579999999888877653
No 334
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=80.07 E-value=18 Score=27.79 Aligned_cols=11 Identities=36% Similarity=0.815 Sum_probs=4.4
Q ss_pred HHHHHHHHHHH
Q 006645 592 LQKELELLQRQ 602 (637)
Q Consensus 592 ~~~e~~~~~~~ 602 (637)
+++.++.|+..
T Consensus 58 l~~ni~~lk~K 68 (78)
T 3iv1_A 58 VDKNIELLKKK 68 (78)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33344444433
No 335
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=80.03 E-value=63 Score=33.98 Aligned_cols=59 Identities=14% Similarity=0.044 Sum_probs=38.0
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETM 333 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~ 333 (637)
++++|+|-|. ..|.||..+.+...-.=.| .| . --++....+++|+|-|. ..|+||..+.
T Consensus 158 ~~~~yfFkG~--------~yw~yd~~~~~~~~~~w~g-i~--~-iDAA~~~~g~~YfFkG~--------~y~rfd~~~~ 216 (460)
T 1qhu_A 158 DEGILFFQGN--------RKWFWDLTTGTKKERSWPA-VG--N-CTSALRWLGRYYCFQGN--------QFLRFNPVSG 216 (460)
T ss_dssp SSEEEEEETT--------EEEEEETTTTEEEEECCTT-SC--C-CSEEEEETTEEEEEETT--------EEEEECTTTC
T ss_pred CCeEEEEecc--------cEEEEecccceeecccCCC-CC--c-cchheeeCCceEEEECC--------EEEEEcCccC
Confidence 6789999884 5799999887655321111 22 2 23455567899999873 4667776543
No 336
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=79.89 E-value=17 Score=35.98 Aligned_cols=150 Identities=11% Similarity=0.070 Sum_probs=70.9
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--C--CEEEEEEccCCCCCc
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--E--NKLLSIAGHTKDPSE 270 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~--~~lyv~GG~~~~~~~ 270 (637)
++.+++.||.++ .+..+|..+..|..+..... .... -.++.+ + +.+++.|+.+.
T Consensus 164 ~~~~l~s~s~D~-----~i~iW~~~~~~~~~~~~~~~-----------h~~~--v~~~~~~~~~~~~~l~s~s~D~---- 221 (330)
T 2hes_X 164 SEALLASSSYDD-----TVRIWKDYDDDWECVAVLNG-----------HEGT--VWSSDFDKTEGVFRLCSGSDDS---- 221 (330)
T ss_dssp SSSEEEEEETTS-----CEEEEEEETTEEEEEEEECC-----------CSSC--EEEEEECCSSSSCEEEEEETTS----
T ss_pred CCCEEEEEcCCC-----eEEEEECCCCCeeEEEEccC-----------CCCc--EEEEEecCCCCeeEEEEEeCCC----
Confidence 455667776433 47788888887776654320 1111 112222 2 34556666543
Q ss_pred ceeEEEEECCC------CceEeeccCCCCCC-CCCceEEEE-ECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCC
Q 006645 271 IIQVKVFDLQT------CSWSTLKTYGKPPV-SRGGQSVTL-VGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVG 342 (637)
Q Consensus 271 ~~~v~~yd~~t------~~W~~~~~~g~~p~-~r~~~~~~~-~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~ 342 (637)
.+.+||+.+ ..|..... .+. ......++. ..+.+++.||.+ +.+.+||..+..|..+....
T Consensus 222 --~v~iw~~~~~~~~~~~~~~~~~~---~~~~h~~~v~~v~~s~~~~l~s~~~d------g~v~iw~~~~~~~~~~~~~~ 290 (330)
T 2hes_X 222 --TVRVWKYMGDDEDDQQEWVCEAI---LPDVHKRQVYNVAWGFNGLIASVGAD------GVLAVYEEVDGEWKVFAKRA 290 (330)
T ss_dssp --CEEEEEEEEECTTSCEEEEEEEE---CCSCCSSCEEEEEECTTSCEEEEETT------SCEEEEEEETTEEEEEEEES
T ss_pred --eEEEEEecCCCccccceeEEeee---cccccccceEEEEEcCCCEEEEEeCC------CEEEEEEcCCCceEEEeccc
Confidence 355555433 24544433 111 111112222 244466667653 35888998888886553210
Q ss_pred CCCCcccccEEEEEc--CCEEEEEeCCCCCCCcCcEEEEECC
Q 006645 343 VPPSPRSDHAAAVHA--ERYLLIFGGGSHAACFNDLHVLDLQ 382 (637)
Q Consensus 343 ~~p~~r~~h~~~~~~--~~~l~v~GG~~~~~~~~dl~~~d~~ 382 (637)
.......-.++.... ++.+++.||.++ .+.++|+.
T Consensus 291 ~~h~~~~v~~v~~~~~~~~~~las~s~Dg-----~v~~W~~~ 327 (330)
T 2hes_X 291 LCHGVYEINVVKWLELNGKTILATGGDDG-----IVNFWSLE 327 (330)
T ss_dssp CTTTTSCEEEEEEC-----CCEEEEETTS-----EEEEEEC-
T ss_pred cccccceEEEEEEecCCCceEEEEecCCC-----cEEEEEec
Confidence 001110111222222 455778887642 46677654
No 337
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=79.76 E-value=16 Score=29.85 Aligned_cols=24 Identities=17% Similarity=0.192 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHH
Q 006645 538 IQLKQDLTEAESQNTDLYKELQSV 561 (637)
Q Consensus 538 ~~l~~~l~e~e~~~~~~~~elq~~ 561 (637)
++++++++....+++.++.++++.
T Consensus 11 ~~lq~~~~~l~~q~~~l~~~~~e~ 34 (107)
T 1fxk_A 11 QQLQQQAQAISVQKQTVEMQINET 34 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444433
No 338
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=79.47 E-value=3.6 Score=42.09 Aligned_cols=17 Identities=18% Similarity=0.173 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHHHHHh
Q 006645 598 LLQRQKAASEQAALNAK 614 (637)
Q Consensus 598 ~~~~~~~~~~~~~~~~~ 614 (637)
.++.++...+.++..++
T Consensus 133 ~~~~~l~~~~~~l~~a~ 149 (369)
T 4dk0_A 133 VVQENIKQAEIEVNTAE 149 (369)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333334444444444
No 339
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=79.33 E-value=7.3 Score=31.42 Aligned_cols=8 Identities=0% Similarity=-0.002 Sum_probs=3.0
Q ss_pred HHhhhhhH
Q 006645 525 ELESSLSK 532 (637)
Q Consensus 525 ~le~~~~e 532 (637)
.|+..+++
T Consensus 23 ~LE~~l~e 30 (95)
T 3mov_A 23 ACLERIQE 30 (95)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 340
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=79.14 E-value=47 Score=31.96 Aligned_cols=150 Identities=8% Similarity=0.014 Sum_probs=73.8
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCe--EEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWA--WSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~ 272 (637)
.+++++.|.. -+.++.+|..|++ |+.-... .....+..+.-++.||+.+ .+
T Consensus 4 ~~~~lv~~~~-----~~~v~~~d~~tG~~~w~~~~~~--------------~~~~~~~~~~pdG~ilvs~--------~~ 56 (276)
T 3no2_A 4 PQHLLVGGSG-----WNKIAIINKDTKEIVWEYPLEK--------------GWECNSVAATKAGEILFSY--------SK 56 (276)
T ss_dssp CCEEEEECTT-----CSEEEEEETTTTEEEEEEECCT--------------TCCCCEEEECTTSCEEEEC--------BS
T ss_pred CCcEEEeeCC-----CCEEEEEECCCCeEEEEeCCCc--------------cCCCcCeEECCCCCEEEeC--------CC
Confidence 3667777653 2568899997865 6543110 0122223333477888832 13
Q ss_pred eEEEEECCCCc--eEeeccCCCCCCCCCceEEEEE-CCEEEEEeCCCCCCCCCCceEEEECCCC-ceEEecCCCCCCCc-
Q 006645 273 QVKVFDLQTCS--WSTLKTYGKPPVSRGGQSVTLV-GTSLVIFGGEDAKRSLLNDLHILDLETM-TWDEIDAVGVPPSP- 347 (637)
Q Consensus 273 ~v~~yd~~t~~--W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~n~i~~yd~~t~-~W~~~~~~~~~p~~- 347 (637)
.+..||+ +++ |+.-.. .....+++..+ ++.+++..+.. ...++.+|++.. .|+.....+ .+.+
T Consensus 57 ~V~~~d~-~G~~~W~~~~~-----~~~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~-~~~~~ 124 (276)
T 3no2_A 57 GAKMITR-DGRELWNIAAP-----AGCEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETG-IERPH 124 (276)
T ss_dssp EEEEECT-TSCEEEEEECC-----TTCEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCS-CSSGG
T ss_pred CEEEECC-CCCEEEEEcCC-----CCccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCC-CCccc
Confidence 5899998 543 665421 11122333333 55555554321 235788887544 244322111 1111
Q ss_pred ccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCC-eeEe
Q 006645 348 RSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTM-EWSR 388 (637)
Q Consensus 348 r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~-~W~~ 388 (637)
...+.+....++.+++.... -+.+.+||+..+ .|+.
T Consensus 125 ~~~~~v~~~~~G~~lv~~~~-----~~~v~~~d~~G~~~w~~ 161 (276)
T 3no2_A 125 AQFRQINKNKKGNYLVPLFA-----TSEVREIAPNGQLLNSV 161 (276)
T ss_dssp GSCSCCEECTTSCEEEEETT-----TTEEEEECTTSCEEEEE
T ss_pred ccccCceECCCCCEEEEecC-----CCEEEEECCCCCEEEEE
Confidence 11222334444545655432 245899998733 3553
No 341
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=79.02 E-value=48 Score=31.99 Aligned_cols=148 Identities=11% Similarity=0.015 Sum_probs=71.1
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~ 272 (637)
++.+++.|+.+ ..+.++|+.+++-...-.. ... .-.++.+ ++.+++.|+.+.
T Consensus 66 ~~~~l~s~s~d-----~~i~vwd~~~~~~~~~~~~-------------h~~--~v~~~~~~~~~~~l~sgs~D~------ 119 (304)
T 2ynn_A 66 RKNWIIVGSDD-----FRIRVFNYNTGEKVVDFEA-------------HPD--YIRSIAVHPTKPYVLSGSDDL------ 119 (304)
T ss_dssp GGTEEEEEETT-----SEEEEEETTTCCEEEEEEC-------------CSS--CEEEEEECSSSSEEEEEETTS------
T ss_pred CCCEEEEECCC-----CEEEEEECCCCcEEEEEeC-------------CCC--cEEEEEEcCCCCEEEEECCCC------
Confidence 45566666632 3588899888653221110 011 1122222 456677777654
Q ss_pred eEEEEECCCCceEeeccCCCCCCCCCceEEEEE---CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCccc
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV---GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRS 349 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~ 349 (637)
.+.++|+.++. ..... .........++.+ ++.+++.|+.+ ..+.+||+.+..-...... ...+.
T Consensus 120 ~v~lWd~~~~~-~~~~~---~~~h~~~v~~v~~~p~~~~~l~sgs~D------~~v~iwd~~~~~~~~~~~~---~~~~~ 186 (304)
T 2ynn_A 120 TVKLWNWENNW-ALEQT---FEGHEHFVMCVAFNPKDPSTFASGCLD------RTVKVWSLGQSTPNFTLTT---GQERG 186 (304)
T ss_dssp CEEEEEGGGTT-EEEEE---ECCCCSCEEEEEECTTCTTEEEEEETT------SEEEEEETTCSSCSEEEEC---CCTTC
T ss_pred eEEEEECCCCc-chhhh---hcccCCcEEEEEECCCCCCEEEEEeCC------CeEEEEECCCCCccceecc---CCcCc
Confidence 47788876542 11111 1111112223333 34677778764 3588888765431111000 01111
Q ss_pred ccEEEEE--cCCEEEEEeCCCCCCCcCcEEEEECCCCee
Q 006645 350 DHAAAVH--AERYLLIFGGGSHAACFNDLHVLDLQTMEW 386 (637)
Q Consensus 350 ~h~~~~~--~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W 386 (637)
....... .++.+++.|+.+ ..+.++|+.+..-
T Consensus 187 v~~~~~~~~~~~~~l~s~s~D-----~~i~iWd~~~~~~ 220 (304)
T 2ynn_A 187 VNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSC 220 (304)
T ss_dssp EEEEEECCSTTCCEEEEEETT-----SEEEEEETTTTEE
T ss_pred EEEEEEEEcCCCCEEEEEcCC-----CeEEEEeCCCCcc
Confidence 1112221 244566777654 3588899887653
No 342
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=78.83 E-value=52 Score=32.30 Aligned_cols=154 Identities=12% Similarity=0.158 Sum_probs=75.4
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~ 272 (637)
.+.+++.|+.+ ..+..||+.+.+-...... .... ...++.+ ++.+++.|+.++
T Consensus 138 ~~~~l~s~s~d-----g~i~~wd~~~~~~~~~~~~-------------~~~~-~i~~~~~~pdg~~lasg~~dg------ 192 (343)
T 3lrv_A 138 NTEYFIWADNR-----GTIGFQSYEDDSQYIVHSA-------------KSDV-EYSSGVLHKDSLLLALYSPDG------ 192 (343)
T ss_dssp -CCEEEEEETT-----CCEEEEESSSSCEEEEECC-------------CSSC-CCCEEEECTTSCEEEEECTTS------
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCcEEEEEec-------------CCCC-ceEEEEECCCCCEEEEEcCCC------
Confidence 45667777743 3588999988776433211 1111 1222333 577888887654
Q ss_pred eEEEEECCCCceEeeccCCCCCC-CCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceE-EecCCCCCCCcc
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPV-SRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWD-EIDAVGVPPSPR 348 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~-~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~-~~~~~~~~p~~r 348 (637)
.|.+||+.+..-.... ... ......++.+ ++..++.|+ + +.+.+||+.+..-. .+........+.
T Consensus 193 ~i~iwd~~~~~~~~~~----~~~~h~~~v~~l~fs~~g~~l~s~~-~------~~v~iwd~~~~~~~~~~~~~~~~~~~~ 261 (343)
T 3lrv_A 193 ILDVYNLSSPDQASSR----FPVDEEAKIKEVKFADNGYWMVVEC-D------QTVVCFDLRKDVGTLAYPTYTIPEFKT 261 (343)
T ss_dssp CEEEEESSCTTSCCEE----CCCCTTSCEEEEEECTTSSEEEEEE-S------SBEEEEETTSSTTCBSSCCCBC-----
T ss_pred EEEEEECCCCCCCccE----EeccCCCCEEEEEEeCCCCEEEEEe-C------CeEEEEEcCCCCcceeecccccccccc
Confidence 5889999887643111 111 1122233333 456666666 2 25899998765321 111000000111
Q ss_pred cccEEEEEcCCEEEEEeCCCCCCCcCcEEEEEC--CCCeeEe
Q 006645 349 SDHAAAVHAERYLLIFGGGSHAACFNDLHVLDL--QTMEWSR 388 (637)
Q Consensus 349 ~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~--~t~~W~~ 388 (637)
...+++...++..++.|+..+ +.+.+|+. ....|..
T Consensus 262 ~~~~~~~~~~g~~l~~~s~~d----~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 262 GTVTYDIDDSGKNMIAYSNES----NSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp CCEEEEECTTSSEEEEEETTT----TEEEEEEECTTTCSEEE
T ss_pred cceEEEECCCCCEEEEecCCC----CcEEEEEEcccccceEe
Confidence 112344444555555544311 23555554 6677986
No 343
>3ibp_A Chromosome partition protein MUKB; structural maintenance of chromosomes, SMC, condensin, chromosome segregation, hinge, dimerization domain; 3.10A {Escherichia coli}
Probab=78.83 E-value=21 Score=34.76 Aligned_cols=35 Identities=20% Similarity=0.318 Sum_probs=16.3
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 006645 523 KEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKE 557 (637)
Q Consensus 523 ~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~e 557 (637)
.++++..+.+.......+.++++++..++++++++
T Consensus 5 ~~~l~~~~~~~~e~r~~lr~~~eql~~~i~~L~~~ 39 (302)
T 3ibp_A 5 IASLSDSVSNAREERMALRQEQEQLQSRIQSLMQR 39 (302)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666665555556666655555555554443
No 344
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=78.67 E-value=58 Score=32.79 Aligned_cols=106 Identities=14% Similarity=0.149 Sum_probs=59.9
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLET 332 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t 332 (637)
++++++.|+.+. .+.+||+.+.+-...-. .......++.+ ++..++.|+.+ ..+.+||+.+
T Consensus 134 dg~~l~s~~~d~------~i~iwd~~~~~~~~~~~-----~h~~~v~~~~~~p~~~~l~s~s~d------~~v~iwd~~~ 196 (393)
T 1erj_A 134 DGKFLATGAEDR------LIRIWDIENRKIVMILQ-----GHEQDIYSLDYFPSGDKLVSGSGD------RTVRIWDLRT 196 (393)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETT------SEEEEEETTT
T ss_pred CCCEEEEEcCCC------eEEEEECCCCcEEEEEc-----cCCCCEEEEEEcCCCCEEEEecCC------CcEEEEECCC
Confidence 567777887654 58899998876543321 11111222233 45566666653 4588999988
Q ss_pred CceEEecCCCCCCCcccccEEEEEc-CCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 333 MTWDEIDAVGVPPSPRSDHAAAVHA-ERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 333 ~~W~~~~~~~~~p~~r~~h~~~~~~-~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
......-.. .....++++.. ++.+++.|+.+ ..+.+||+.+..-.
T Consensus 197 ~~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~s~d-----~~v~iwd~~~~~~~ 242 (393)
T 1erj_A 197 GQCSLTLSI-----EDGVTTVAVSPGDGKYIAAGSLD-----RAVRVWDSETGFLV 242 (393)
T ss_dssp TEEEEEEEC-----SSCEEEEEECSTTCCEEEEEETT-----SCEEEEETTTCCEE
T ss_pred CeeEEEEEc-----CCCcEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCcEE
Confidence 765433211 11122333333 55677788754 34788998876543
No 345
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=78.44 E-value=64 Score=33.11 Aligned_cols=152 Identities=9% Similarity=0.076 Sum_probs=82.1
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe-CCEEEEEEccCCCCCccee
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW-ENKLLSIAGHTKDPSEIIQ 273 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~-~~~lyv~GG~~~~~~~~~~ 273 (637)
++.||+.... .+.+.++|+.++.-..+.... ...+.++.- ++.||+...... ..
T Consensus 141 ~g~lyv~d~~-----~~~I~~id~~~g~~~~~~~~~---------------~~~~ia~~~~g~~l~~~d~~~~-----~~ 195 (409)
T 3hrp_A 141 NNTVLAYQRD-----DPRVRLISVDDNKVTTVHPGF---------------KGGKPAVTKDKQRVYSIGWEGT-----HT 195 (409)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTTEEEEEEETC---------------CBCBCEECTTSSEEEEEBSSTT-----CE
T ss_pred CCCEEEEecC-----CCcEEEEECCCCEEEEeeccC---------------CCCceeEecCCCcEEEEecCCC-----ce
Confidence 5789998652 246899999988776664321 112211222 346666543221 17
Q ss_pred EEEEECCCCce-EeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccc
Q 006645 274 VKVFDLQTCSW-STLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSD 350 (637)
Q Consensus 274 v~~yd~~t~~W-~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~ 350 (637)
++.||+.+..- ..+.... .+....-+++++. ++.||+..+ .+.|++||+.+.....+...+........
T Consensus 196 I~~~d~~~~~~~~~~g~~~-~~~~~~p~~iav~p~~g~lyv~d~-------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~ 267 (409)
T 3hrp_A 196 VYVYMKASGWAPTRIGQLG-STFSGKIGAVALDETEEWLYFVDS-------NKNFGRFNVKTQEVTLIKQLELSGSLGTN 267 (409)
T ss_dssp EEEEEGGGTTCEEEEEECC-TTSCSCCCBCEECTTSSEEEEECT-------TCEEEEEETTTCCEEEEEECCCCSCCCCS
T ss_pred EEEEEcCCCceeEEeeecc-chhcCCcEEEEEeCCCCeEEEEEC-------CCcEEEEECCCCCEEEEecccccCCCCCC
Confidence 89999865432 2331100 0011122233333 578888321 24699999998876555221111111222
Q ss_pred -c-EEEEEc-CCEEEEEeCCCCCCCcCcEEEEECCCC
Q 006645 351 -H-AAAVHA-ERYLLIFGGGSHAACFNDLHVLDLQTM 384 (637)
Q Consensus 351 -h-~~~~~~-~~~l~v~GG~~~~~~~~dl~~~d~~t~ 384 (637)
+ .+++.. ++.||+.... .+.|++||+...
T Consensus 268 P~~~ia~~p~~g~lyv~d~~-----~~~I~~~~~~g~ 299 (409)
T 3hrp_A 268 PGPYLIYYFVDSNFYMSDQN-----LSSVYKITPDGE 299 (409)
T ss_dssp SCCEEEEETTTTEEEEEETT-----TTEEEEECTTCC
T ss_pred ccccEEEeCCCCEEEEEeCC-----CCEEEEEecCCC
Confidence 2 556655 5789988643 246899988765
No 346
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=78.36 E-value=7.6 Score=39.60 Aligned_cols=27 Identities=11% Similarity=0.152 Sum_probs=14.3
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006645 587 QTMETLQKELELLQRQKAASEQAALNA 613 (637)
Q Consensus 587 q~~q~~~~e~~~~~~~~~~~~~~~~~~ 613 (637)
.+++.++.++++++.++...+.++...
T Consensus 129 a~~~~~~~~l~~~~~~l~~a~~~l~~~ 155 (369)
T 4dk0_A 129 AEMDVVQENIKQAEIEVNTAETNLGYT 155 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 334445555666665555555555333
No 347
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=78.33 E-value=64 Score=33.07 Aligned_cols=121 Identities=13% Similarity=0.105 Sum_probs=66.6
Q ss_pred CCCCCcccceEEEeCCEEEEEEccCCCC-CcceeEEEEE-----CCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeC
Q 006645 241 ALLTPCAGHSLIPWENKLLSIAGHTKDP-SEIIQVKVFD-----LQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGG 314 (637)
Q Consensus 241 ~~p~~r~~hs~v~~~~~lyv~GG~~~~~-~~~~~v~~yd-----~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG 314 (637)
..|....-|+.+.+++.-|++|=+.++- ...--+..|. +....=+.++.. .-....-.+.-.+++.||++--
T Consensus 279 ~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~se--y~~~AsEPCvkyYdgvLyLtTR 356 (670)
T 3ju4_A 279 LIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSE--YEPDASEPCIKYYDGVLYLITR 356 (670)
T ss_dssp SCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGG--GCTTEEEEEEEEETTEEEEEEE
T ss_pred cccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhh--hccccccchhhhhCCEEEEEec
Confidence 3456677899999999888999777662 1222222221 111112222211 1112223344456999998864
Q ss_pred CCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeC
Q 006645 315 EDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGG 366 (637)
Q Consensus 315 ~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG 366 (637)
-......-..+++-+.....|+.+..... .-......+.+ ++.|||||-
T Consensus 357 gt~~~~~GS~L~rs~d~Gq~w~slrfp~n--vHhtnlPFakv-gD~l~mFgs 405 (670)
T 3ju4_A 357 GTRGDRLGSSLHRSRDIGQTWESLRFPHN--VHHTTLPFAKV-GDDLIMFGS 405 (670)
T ss_dssp ESCTTSCCCEEEEESSTTSSCEEEECTTC--CCSSCCCEEEE-TTEEEEEEE
T ss_pred CcCCCCCcceeeeecccCCchhheecccc--ccccCCCccee-CCEEEEEec
Confidence 33332345677888888889999863311 11111223344 677999986
No 348
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=78.31 E-value=3.7 Score=41.07 Aligned_cols=44 Identities=11% Similarity=0.190 Sum_probs=17.2
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q 006645 540 LKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELR 583 (637)
Q Consensus 540 l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~ 583 (637)
|..++.+.|..+...+.+++..+.++...+.++.+|++++.+|+
T Consensus 10 ~~~~~~~~e~~i~~~~~~i~~L~~~l~~~~~~i~~l~~~i~~l~ 53 (323)
T 1lwu_C 10 ILEEVRILEQIGVSHDAQIQELSEMWRVNQQFVTRLQQQLVDIR 53 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333344444444444333333333333333333
No 349
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=78.28 E-value=12 Score=31.56 Aligned_cols=42 Identities=29% Similarity=0.312 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHH
Q 006645 537 SIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAE 581 (637)
Q Consensus 537 ~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~e 581 (637)
+..|+.+++....++..+..|-|.+-.+| +.++.+|+.++.+
T Consensus 17 Ie~Lkreie~lk~ele~l~~E~q~~v~ql---~~~i~~Le~eL~e 58 (120)
T 3i00_A 17 IERLYREISGLKAQLENMKTESQRVVLQL---KGHVSELEADLAE 58 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
Confidence 34444444444444443333333333333 3344444444443
No 350
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=78.08 E-value=44 Score=31.00 Aligned_cols=111 Identities=15% Similarity=0.156 Sum_probs=56.9
Q ss_pred eEEEeCCEEEEEEccCCCCCcceeEEEEECCCCceEe--eccC-CCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCc
Q 006645 250 SLIPWENKLLSIAGHTKDPSEIIQVKVFDLQTCSWST--LKTY-GKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLND 324 (637)
Q Consensus 250 s~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~--~~~~-g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~ 324 (637)
+++.+++.+|+|=|. .+|.++.....+.. ++.. ..+|.. .. ++... ++++|+|-|. .
T Consensus 28 Ai~~~~g~~y~Fkg~--------~~wr~~~~~~~~~p~~I~~~wp~Lp~~-iD-Aa~~~~~~~~iyfFkG~--------~ 89 (207)
T 1pex_A 28 AITSLRGETMIFKDR--------FFWRLHPQQVDAELFLTKSFWPELPNR-ID-AAYEHPSHDLIFIFRGR--------K 89 (207)
T ss_dssp EEEEETTEEEEEETT--------EEEEECSSSSCCEEEEHHHHCTTSCSS-CC-EEEEETTTTEEEEEETT--------E
T ss_pred EEEeCCCcEEEEECC--------EEEEEeCCCcCCCceehhHhccCCCCC-cc-EEEEeccCCcEEEEccC--------E
Confidence 444578999999875 46666654433321 1110 113322 22 23333 5899999773 4
Q ss_pred eEEEECCCCce---EEecCCCCCCCcccccEEEEE-cCCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 325 LHILDLETMTW---DEIDAVGVPPSPRSDHAAAVH-AERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 325 i~~yd~~t~~W---~~~~~~~~~p~~r~~h~~~~~-~~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
+|+|+-.+..- ..+...|-+..+..--++... .++++|+|-| +..|+||..+++
T Consensus 90 ~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~~ 147 (207)
T 1pex_A 90 FWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHI 147 (207)
T ss_dssp EEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTE
T ss_pred EEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCcCcc
Confidence 66665322111 223222222111122233333 3578999988 358999987653
No 351
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=77.78 E-value=18 Score=29.42 Aligned_cols=53 Identities=8% Similarity=0.048 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 006645 555 YKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQTMETLQKELELLQRQKAASEQA 609 (637)
Q Consensus 555 ~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~~q~~~~e~~~~~~~~~~~~~~ 609 (637)
.+.++++++.|.+.++-+.+.+-|++.+.- .....+..+++.++.++..+.++
T Consensus 48 k~~i~~ie~~ldEA~eLl~qMelE~r~~p~--s~R~~~~~klr~Yk~dL~~lk~e 100 (102)
T 2qyw_A 48 KKLVRDFDEKQQEANETLAEMEEELRYAPL--TFRNPMMSKLRNYRKDLAKLHRE 100 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCH--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHhh
Confidence 344555555555555555555555544321 11223444555555555554443
No 352
>3a7o_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.50A {Saccharomyces cerevisiae}
Probab=77.56 E-value=17 Score=26.95 Aligned_cols=36 Identities=19% Similarity=0.223 Sum_probs=18.0
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 006645 523 KEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKEL 558 (637)
Q Consensus 523 ~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~el 558 (637)
...|++.+..+++++.+|++.+.=+-+..+.+..|+
T Consensus 20 l~~Lr~eL~~Ke~eI~~L~e~i~lk~kd~ErLNDEi 55 (75)
T 3a7o_A 20 LAILQKELKSKEQEIRRLKEVIALKNKNTERLNDEL 55 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccHHHhhHHH
Confidence 345555566666666666655554333333333333
No 353
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=77.37 E-value=68 Score=32.88 Aligned_cols=111 Identities=14% Similarity=0.132 Sum_probs=63.5
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLET 332 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t 332 (637)
++.||+.... .+.|.+||+.++.-..+...+.. .+ .+.. ++.||+..... ...+++|++.+
T Consensus 141 ~g~lyv~d~~------~~~I~~id~~~g~~~~~~~~~~~-----~~-ia~~~~g~~l~~~d~~~-----~~~I~~~d~~~ 203 (409)
T 3hrp_A 141 NNTVLAYQRD------DPRVRLISVDDNKVTTVHPGFKG-----GK-PAVTKDKQRVYSIGWEG-----THTVYVYMKAS 203 (409)
T ss_dssp TTEEEEEETT------TTEEEEEETTTTEEEEEEETCCB-----CB-CEECTTSSEEEEEBSST-----TCEEEEEEGGG
T ss_pred CCCEEEEecC------CCcEEEEECCCCEEEEeeccCCC-----Cc-eeEecCCCcEEEEecCC-----CceEEEEEcCC
Confidence 6789998753 24699999998877766542211 12 2222 34666654321 12699999875
Q ss_pred Cc-eEEecCCCCCCCcccccEEEEEc-CCEEEEEeCCCCCCCcCcEEEEECCCCeeEec
Q 006645 333 MT-WDEIDAVGVPPSPRSDHAAAVHA-ERYLLIFGGGSHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 333 ~~-W~~~~~~~~~p~~r~~h~~~~~~-~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l 389 (637)
.. ...+.... .+....-+++++.. ++.||+..+ ...+++||+.+.....+
T Consensus 204 ~~~~~~~g~~~-~~~~~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 204 GWAPTRIGQLG-STFSGKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp TTCEEEEEECC-TTSCSCCCBCEECTTSSEEEEECT------TCEEEEEETTTCCEEEE
T ss_pred CceeEEeeecc-chhcCCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCCCEEEE
Confidence 43 23331110 11223334556655 678888432 23699999988765554
No 354
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=77.14 E-value=55 Score=31.65 Aligned_cols=166 Identities=6% Similarity=-0.018 Sum_probs=82.5
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEE----EccCC----
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSI----AGHTK---- 266 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~----GG~~~---- 266 (637)
+++||+.... ...+.+||+. ++...+.... ...+..+....++.-++.||+. |-...
T Consensus 96 dG~l~v~~~~-----~~~v~~~~~~-g~~~~~~~~~---------~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~ 160 (305)
T 3dr2_A 96 QQRLVHCEHG-----RRAITRSDAD-GQAHLLVGRY---------AGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGC 160 (305)
T ss_dssp TSCEEEEETT-----TTEEEEECTT-SCEEEEECEE---------TTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSC
T ss_pred CCCEEEEECC-----CCEEEEECCC-CCEEEEEecc---------CCCccCCCCCEEECCCCCEEEeCcCCCcccccccc
Confidence 4677776321 1358889886 6666554321 0001111122223336788884 32110
Q ss_pred ---CCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE-CC-EEEEEeCCCCCCCCCCceEEEECCCCceEEecCC
Q 006645 267 ---DPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GT-SLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAV 341 (637)
Q Consensus 267 ---~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~ 341 (637)
.......|++||+.++++..+. . ...+ ...+.. ++ .||+....... ...+.|++|++...........
T Consensus 161 ~~~~~~~~~~v~~~d~~~g~~~~~~-~--~~~p---~gl~~spdg~~lyv~~~~~~~-~~~~~i~~~~~~~~~l~~~~~~ 233 (305)
T 3dr2_A 161 PADPELAHHSVYRLPPDGSPLQRMA-D--LDHP---NGLAFSPDEQTLYVSQTPEQG-HGSVEITAFAWRDGALHDRRHF 233 (305)
T ss_dssp CCCCSSSCEEEEEECSSSCCCEEEE-E--ESSE---EEEEECTTSSEEEEEECCC----CCCEEEEEEEETTEEEEEEEE
T ss_pred ccccccCCCeEEEEcCCCCcEEEEe-c--CCCC---cceEEcCCCCEEEEEecCCcC-CCCCEEEEEEecCCCccCCeEE
Confidence 0112467999999888877664 1 1111 123332 33 57776542111 0135799999876543221111
Q ss_pred CCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecc
Q 006645 342 GVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPT 390 (637)
Q Consensus 342 ~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~ 390 (637)
...+ ...-.++++..++.||+..+ +.|++||+.......+.
T Consensus 234 ~~~~-~~~pdgi~~d~~G~lwv~~~-------~gv~~~~~~g~~~~~~~ 274 (305)
T 3dr2_A 234 ASVP-DGLPDGFCVDRGGWLWSSSG-------TGVCVFDSDGQLLGHIP 274 (305)
T ss_dssp ECCS-SSCCCSEEECTTSCEEECCS-------SEEEEECTTSCEEEEEE
T ss_pred EECC-CCCCCeEEECCCCCEEEecC-------CcEEEECCCCCEEEEEE
Confidence 0011 11112345555566777542 24999999776665554
No 355
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=76.99 E-value=30 Score=28.58 Aligned_cols=23 Identities=22% Similarity=0.176 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHH
Q 006645 538 IQLKQDLTEAESQNTDLYKELQS 560 (637)
Q Consensus 538 ~~l~~~l~e~e~~~~~~~~elq~ 560 (637)
++++++++....+++.++.++++
T Consensus 16 ~~l~~~~~~l~~q~~~l~~~~~e 38 (117)
T 2zqm_A 16 ESYQQQLQLVVQQKQKVQLELTE 38 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444433333
No 356
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=76.79 E-value=45 Score=30.52 Aligned_cols=111 Identities=15% Similarity=0.174 Sum_probs=57.8
Q ss_pred eEEEeCCEEEEEEccCCCCCcceeEEEEECCCC--ceEe--eccC-CCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCC
Q 006645 250 SLIPWENKLLSIAGHTKDPSEIIQVKVFDLQTC--SWST--LKTY-GKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLL 322 (637)
Q Consensus 250 s~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~--~W~~--~~~~-g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~ 322 (637)
+++.+++.+|+|=|. .+|+++.... .... ++.. ..+|... . ++... ++++|+|-|
T Consensus 11 Ai~~~~g~~yfFkg~--------~~Wr~~~~~~~~~~~p~~Is~~w~glP~~I-D-Aa~~~~~~~~~yfFkG-------- 72 (195)
T 1itv_A 11 AIAEIGNQLYLFKDG--------KYWRFSEGRGSRPQGPFLIADKWPALPRKL-D-SVFEEPLSKKLFFFSG-------- 72 (195)
T ss_dssp EEEEETTEEEEEETT--------EEEEECCSSSCCCEEEEEHHHHCTTSCSSC-S-EEEECTTTCCEEEEET--------
T ss_pred EEEEeCCEEEEEECC--------EEEEEECCccccCCCcEEhhhccCCCCCCc-c-EEEEECCCCeEEEEeC--------
Confidence 345579999999875 4677766542 1111 1110 1234322 1 22232 578999987
Q ss_pred CceEEEECCCCce-EEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 323 NDLHILDLETMTW-DEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 323 n~i~~yd~~t~~W-~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
+..|+|+..+..- ..+...|-+.....--++....++++|+|-|. ..|.||..+.+
T Consensus 73 ~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg~-------~ywr~d~~~~~ 129 (195)
T 1itv_A 73 RQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSGR-------RLWRFDVKAQM 129 (195)
T ss_dssp TEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEETT-------EEEEEETTTTE
T ss_pred CEEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeCC-------EEEEEeCCccc
Confidence 3477887543211 11211121111111223333446789999873 58999987654
No 357
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=76.34 E-value=52 Score=36.23 Aligned_cols=111 Identities=7% Similarity=-0.128 Sum_probs=55.0
Q ss_pred cEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCC---CCcceeEEEEECCCCceEeec
Q 006645 212 DMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKD---PSEIIQVKVFDLQTCSWSTLK 288 (637)
Q Consensus 212 ~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~---~~~~~~v~~yd~~t~~W~~~~ 288 (637)
.++++|+.+++-..+.... .............-+++.++++..... ......++++|+.++.-..+.
T Consensus 38 ~i~~~d~~~g~~~~~~~~~----------~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 107 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGK----------KIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLD 107 (723)
T ss_dssp CEEEBCGGGCCCEEEECTT----------TTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECC
T ss_pred CEEEEECCCCcEEEEeccc----------cccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEecc
Confidence 6888888887655443211 000001111122225665666544322 123468999999988765553
Q ss_pred cCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecC
Q 006645 289 TYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDA 340 (637)
Q Consensus 289 ~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~ 340 (637)
... .........+..-+++.++|+.. +.|+++|+.+.....+..
T Consensus 108 ~~~-~~~~~~~~~~~SPdG~~la~~~~-------~~i~~~~~~~g~~~~~~~ 151 (723)
T 1xfd_A 108 PPE-VSNAKLQYAGWGPKGQQLIFIFE-------NNIYYCAHVGKQAIRVVS 151 (723)
T ss_dssp CTT-CCSCCCSBCCBCSSTTCEEEEET-------TEEEEESSSSSCCEEEEC
T ss_pred CCc-cccccccccEECCCCCEEEEEEC-------CeEEEEECCCCceEEEec
Confidence 311 10001111111224544444432 368888888877666643
No 358
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=76.32 E-value=41 Score=31.66 Aligned_cols=62 Identities=18% Similarity=0.253 Sum_probs=38.3
Q ss_pred CCEEEEEeCCCCCCCCCCceEEEECCCCceEEe-cCCC-CCCC------cccccEEEEE-cCCEEEEEeCCCCCCCcCcE
Q 006645 306 GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEI-DAVG-VPPS------PRSDHAAAVH-AERYLLIFGGGSHAACFNDL 376 (637)
Q Consensus 306 ~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~-~~~~-~~p~------~r~~h~~~~~-~~~~l~v~GG~~~~~~~~dl 376 (637)
++++|+|-| +..|+||..+.+...- .... ..|. +..-.++... .++++|+|-|. ..
T Consensus 127 ~gk~yfFkG--------~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~-------~y 191 (225)
T 3oyo_A 127 GKEVYLFKG--------NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ-------NY 191 (225)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT-------EE
T ss_pred CCcEEEEeC--------CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC-------EE
Confidence 679999987 3579999776655431 1000 0111 2333344443 47889999884 58
Q ss_pred EEEECC
Q 006645 377 HVLDLQ 382 (637)
Q Consensus 377 ~~~d~~ 382 (637)
|+||..
T Consensus 192 wr~d~~ 197 (225)
T 3oyo_A 192 VRIDFT 197 (225)
T ss_dssp EEEECC
T ss_pred EEEeCC
Confidence 999987
No 359
>4b6x_A AVRRPS4, avirulence protein; toxin, type 3 secreted effector; 2.20A {Pseudomonas syringae PV}
Probab=76.27 E-value=17 Score=27.64 Aligned_cols=26 Identities=19% Similarity=0.350 Sum_probs=17.9
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHhh
Q 006645 525 ELESSLSKEKLQSIQLKQDLTEAESQ 550 (637)
Q Consensus 525 ~le~~~~e~~~~~~~l~~~l~e~e~~ 550 (637)
+|++.+..++.-++.|.++|+++..+
T Consensus 26 ~lrq~I~DKQ~~i~~Lt~eLq~A~~e 51 (90)
T 4b6x_A 26 ALRQEIEDKQLMVNNLTDELQDAIDE 51 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 55566666777777788887776543
No 360
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=76.04 E-value=62 Score=31.70 Aligned_cols=169 Identities=11% Similarity=0.022 Sum_probs=86.1
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCC--eEEEeeecccccCCCCCCCCCCCCcccc-eEEEe--CCEEEEEEccCCCCC
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSW--AWSKIQAKAVAESTESPSPALLTPCAGH-SLIPW--ENKLLSIAGHTKDPS 269 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~~~~~~~~~~~p~~r~~h-s~v~~--~~~lyv~GG~~~~~~ 269 (637)
++.|||.... .+.+.+||+... .-..+...... .......... .++.. ++.|||..++.
T Consensus 101 ~g~l~v~d~~-----~~~v~~~~~~g~~~~~~~~~~~~~~-------g~~~~~~~~P~~ia~~~~~g~lyv~d~~~---- 164 (329)
T 3fvz_A 101 DGNYWVTDVA-----LHQVFKLDPHSKEGPLLILGRSMQP-------GSDQNHFCQPTDVAVEPSTGAVFVSDGYC---- 164 (329)
T ss_dssp TSCEEEEETT-----TTEEEEECTTCSSCCSEEESBTTBC-------CCSTTCCSSEEEEEECTTTCCEEEEECSS----
T ss_pred CCCEEEEECC-----CCEEEEEeCCCCeEEEEEecccCCC-------CCCccccCCCcEEEEeCCCCeEEEEeCCC----
Confidence 5678887642 246889998765 22222211100 0000111112 23332 57999998632
Q ss_pred cceeEEEEECCCCceEeeccCCCC----CCCCC-ceEEEEE-C-CEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCC
Q 006645 270 EIIQVKVFDLQTCSWSTLKTYGKP----PVSRG-GQSVTLV-G-TSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVG 342 (637)
Q Consensus 270 ~~~~v~~yd~~t~~W~~~~~~g~~----p~~r~-~~~~~~~-~-~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~ 342 (637)
.+.|.+||+....-..+...+.. +.... -+.+++. + +.||+.... .+.|.+||+.+.+....-..
T Consensus 165 -~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~------~~~I~~~~~~~G~~~~~~~~- 236 (329)
T 3fvz_A 165 -NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE------NGRIQCFKTDTKEFVREIKH- 236 (329)
T ss_dssp -CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT------TTEEEEEETTTCCEEEEECC-
T ss_pred -CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC------CCEEEEEECCCCcEEEEEec-
Confidence 23688999654433333222211 11111 1233333 3 799998753 45799999987766544221
Q ss_pred CCCCcccccEEEEEcCCEEEEEeCCCC--CCCcCcEEEEECCCCeeEec
Q 006645 343 VPPSPRSDHAAAVHAERYLLIFGGGSH--AACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 343 ~~p~~r~~h~~~~~~~~~l~v~GG~~~--~~~~~dl~~~d~~t~~W~~l 389 (637)
......-.+++... +.+|+..|... ......++++|+.+......
T Consensus 237 -~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~ 283 (329)
T 3fvz_A 237 -ASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDV 283 (329)
T ss_dssp -TTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEE
T ss_pred -cccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEE
Confidence 11112222344443 66777776421 12234689999887766543
No 361
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=75.99 E-value=54 Score=31.04 Aligned_cols=106 Identities=8% Similarity=0.018 Sum_probs=53.7
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEE-ECCEEEEEeCCCCCCCCCCceEEEECCCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTL-VGTSLVIFGGEDAKRSLLNDLHILDLETM 333 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~n~i~~yd~~t~ 333 (637)
++.+++.|+.++ .+.+||.....- .... +....-.+++. -++. ++.|+.+ ..+.+||+.+.
T Consensus 154 ~~~~l~~~~~d~------~i~i~d~~~~~~-~~~~----~~~~~i~~~~~~~~~~-~~~~~~d------g~i~i~d~~~~ 215 (313)
T 3odt_A 154 SENKFLTASADK------TIKLWQNDKVIK-TFSG----IHNDVVRHLAVVDDGH-FISCSND------GLIKLVDMHTG 215 (313)
T ss_dssp TTTEEEEEETTS------CEEEEETTEEEE-EECS----SCSSCEEEEEEEETTE-EEEEETT------SEEEEEETTTC
T ss_pred CCCEEEEEECCC------CEEEEecCceEE-EEec----cCcccEEEEEEcCCCe-EEEccCC------CeEEEEECCch
Confidence 566677777644 477888332221 1111 11111122222 3566 6666643 46899999876
Q ss_pred ceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEe
Q 006645 334 TWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSR 388 (637)
Q Consensus 334 ~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~ 388 (637)
+-...-.. ....-.+++...++ .++.|+.+ ..+.+||+.+.....
T Consensus 216 ~~~~~~~~----~~~~i~~~~~~~~~-~l~~~~~d-----g~v~iwd~~~~~~~~ 260 (313)
T 3odt_A 216 DVLRTYEG----HESFVYCIKLLPNG-DIVSCGED-----RTVRIWSKENGSLKQ 260 (313)
T ss_dssp CEEEEEEC----CSSCEEEEEECTTS-CEEEEETT-----SEEEEECTTTCCEEE
T ss_pred hhhhhhhc----CCceEEEEEEecCC-CEEEEecC-----CEEEEEECCCCceeE
Confidence 53322111 11112234444455 35566643 458999988776543
No 362
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=75.92 E-value=21 Score=27.07 Aligned_cols=50 Identities=18% Similarity=0.194 Sum_probs=25.1
Q ss_pred HHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 006645 515 LIATLKAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQ 564 (637)
Q Consensus 515 ~~~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~q 564 (637)
.++.|..+-.+|-+......-....|..+++++..+..-+..|+...+.-
T Consensus 10 evEnLi~EN~eLl~TKNaLnvvk~DLI~rvdELt~E~e~l~~El~s~~~~ 59 (77)
T 2w83_C 10 EVENLILENTQLLETKNALNIVKNDLIAKVDELTCEKDVLQGELEAVKQA 59 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 33344444444444444444444556666666655555555555555443
No 363
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=75.88 E-value=41 Score=32.78 Aligned_cols=67 Identities=10% Similarity=0.228 Sum_probs=36.9
Q ss_pred CEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--C--CEEEEEEccCCCCCcc
Q 006645 196 DKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--E--NKLLSIAGHTKDPSEI 271 (637)
Q Consensus 196 ~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~--~~lyv~GG~~~~~~~~ 271 (637)
+.+++.|+.+ ..+.++|+.+..|..+.... .....-.++.+ + +.+++.|+.+.
T Consensus 71 ~~~l~s~s~D-----~~v~iWd~~~~~~~~~~~~~-------------~h~~~V~~v~~~p~~~g~~lasgs~D~----- 127 (316)
T 3bg1_A 71 GNILASCSYD-----RKVIIWREENGTWEKSHEHA-------------GHDSSVNSVCWAPHDYGLILACGSSDG----- 127 (316)
T ss_dssp SSCEEEEETT-----SCEEEECCSSSCCCEEEEEC-------------CCSSCCCEEEECCTTTCSCEEEECSSS-----
T ss_pred CCEEEEEECC-----CEEEEEECCCCcceEEEEcc-------------CCCCceEEEEECCCCCCcEEEEEcCCC-----
Confidence 5566667643 35788898888776554321 00011122222 2 56777777654
Q ss_pred eeEEEEECCCC-ceEe
Q 006645 272 IQVKVFDLQTC-SWST 286 (637)
Q Consensus 272 ~~v~~yd~~t~-~W~~ 286 (637)
.+.++|..+. .|..
T Consensus 128 -~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 128 -AISLLTYTGEGQWEV 142 (316)
T ss_dssp -CEEEEEECSSSCEEE
T ss_pred -CEEEEecCCCCCcce
Confidence 4677777664 4643
No 364
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=75.76 E-value=58 Score=31.24 Aligned_cols=63 Identities=17% Similarity=0.314 Sum_probs=35.3
Q ss_pred CEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--C--CEEEEEEccCCCCCcc
Q 006645 196 DKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--E--NKLLSIAGHTKDPSEI 271 (637)
Q Consensus 196 ~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~--~~lyv~GG~~~~~~~~ 271 (637)
+.+++.|+.+ ..+.++|+.+..|..+.... .......++.+ + +.+++.|+.+.
T Consensus 67 g~~l~s~s~D-----~~v~iWd~~~~~~~~~~~~~-------------~h~~~v~~v~~~p~~~g~~l~s~s~d~----- 123 (297)
T 2pm7_B 67 GTILASCSYD-----GKVMIWKEENGRWSQIAVHA-------------VHSASVNSVQWAPHEYGPMLLVASSDG----- 123 (297)
T ss_dssp CSEEEEEETT-----TEEEEEEBSSSCBCCCEEEC-------------CCSSCEEEEEECCGGGCSEEEEEETTS-----
T ss_pred CCEEEEEcCC-----CEEEEEEcCCCceEEEEEee-------------cCCCceeEEEeCcCCCCcEEEEEECCC-----
Confidence 5567777643 35788999888776554321 01111223333 1 45666776643
Q ss_pred eeEEEEECCCC
Q 006645 272 IQVKVFDLQTC 282 (637)
Q Consensus 272 ~~v~~yd~~t~ 282 (637)
.+.+||+.+.
T Consensus 124 -~v~~wd~~~~ 133 (297)
T 2pm7_B 124 -KVSVVEFKEN 133 (297)
T ss_dssp -EEEEEEBCSS
T ss_pred -cEEEEEecCC
Confidence 4777887654
No 365
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=75.41 E-value=36 Score=36.58 Aligned_cols=111 Identities=13% Similarity=-0.011 Sum_probs=62.3
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCc
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMT 334 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~ 334 (637)
++.++++.+... .+.+||+.++.-..+... +. ...+..-+++.+++++.+... ...|+++|+.+..
T Consensus 121 g~~~~~~s~~~~------~~~l~d~~~g~~~~l~~~---~~---~~~~~spDG~~la~~~~~~~~--~~~i~~~d~~~g~ 186 (582)
T 3o4h_A 121 GEAVVFTGATED------RVALYALDGGGLRELARL---PG---FGFVSDIRGDLIAGLGFFGGG--RVSLFTSNLSSGG 186 (582)
T ss_dssp SSCEEEEEECSS------CEEEEEEETTEEEEEEEE---SS---CEEEEEEETTEEEEEEEEETT--EEEEEEEETTTCC
T ss_pred CCeEEEEecCCC------CceEEEccCCcEEEeecC---CC---ceEEECCCCCEEEEEEEcCCC--CeEEEEEcCCCCC
Confidence 345665555432 233778888877766431 11 222233356555555543322 2459999999999
Q ss_pred eEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 335 WDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 335 W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
+..+... .......+...+++.++.+..++ ...|+++|+.++...
T Consensus 187 ~~~l~~~-----~~~~~~~~~SpDG~~l~~~~~~~---~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 187 LRVFDSG-----EGSFSSASISPGMKVTAGLETAR---EARLVTVDPRDGSVE 231 (582)
T ss_dssp CEEECCS-----SCEEEEEEECTTSCEEEEEECSS---CEEEEEECTTTCCEE
T ss_pred ceEeecC-----CCccccceECCCCCEEEEccCCC---eeEEEEEcCCCCcEE
Confidence 9877422 11223344444554444433221 246999999888776
No 366
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=75.06 E-value=47 Score=34.76 Aligned_cols=19 Identities=26% Similarity=0.181 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 006645 592 LQKELELLQRQKAASEQAA 610 (637)
Q Consensus 592 ~~~e~~~~~~~~~~~~~~~ 610 (637)
.++++-+++.++.+.++++
T Consensus 78 Y~~~~AeY~~kl~aYe~~~ 96 (497)
T 3iox_A 78 YQKDLADYPVKLKAYEDEQ 96 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3344445555555555544
No 367
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=74.96 E-value=19 Score=28.97 Aligned_cols=8 Identities=25% Similarity=0.135 Sum_probs=3.3
Q ss_pred HHHHHHHH
Q 006645 603 KAASEQAA 610 (637)
Q Consensus 603 ~~~~~~~~ 610 (637)
|..++.++
T Consensus 74 Kl~Le~EI 81 (95)
T 3mov_A 74 KLALDMEI 81 (95)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444443
No 368
>1vcs_A Vesicle transport through interaction with T- snares homolog 1A; HABC domain, VTI1, UP and DOWN three helix bundle, LEFT-handed twist; NMR {Mus musculus} SCOP: a.47.2.1
Probab=74.48 E-value=15 Score=29.89 Aligned_cols=20 Identities=5% Similarity=0.052 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 006645 593 QKELELLQRQKAASEQAALN 612 (637)
Q Consensus 593 ~~e~~~~~~~~~~~~~~~~~ 612 (637)
..+++.++.++..+.+++..
T Consensus 73 ~~klr~Yk~dL~~lk~elk~ 92 (102)
T 1vcs_A 73 SNRMRSYKQEMGKLETDFKR 92 (102)
T ss_dssp HHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444433
No 369
>2jo8_A Serine/threonine-protein kinase 4; C-terminal domain, human mammalian sterIle 20-like kinase 1, dimer, transferase; NMR {Homo sapiens}
Probab=74.47 E-value=9.5 Score=26.64 Aligned_cols=34 Identities=21% Similarity=0.500 Sum_probs=24.0
Q ss_pred HHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHHH
Q 006645 580 AELRQKLQTME-TLQKELELLQRQKAASEQAALNA 613 (637)
Q Consensus 580 ~el~~~lq~~q-~~~~e~~~~~~~~~~~~~~~~~~ 613 (637)
.||++++..++ ++++|+++++++-++..|=+.++
T Consensus 13 eEL~~rl~~Ld~~Me~Ei~elr~RY~~KRqPIldA 47 (51)
T 2jo8_A 13 EDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDA 47 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccHHHHHHHHHHHHHHHHhHhhHHHH
Confidence 46666777766 67888888887777766666554
No 370
>1xaw_A Occludin; coiled-coil, cell adhesion; 1.45A {Homo sapiens} SCOP: h.4.17.1 PDB: 1wpa_A 3g7c_A
Probab=74.43 E-value=16 Score=31.57 Aligned_cols=25 Identities=8% Similarity=0.421 Sum_probs=16.2
Q ss_pred HHHHhhhhhhHHHHHHHHHHHHhHH
Q 006645 566 AAEQSRCFKLEVDVAELRQKLQTME 590 (637)
Q Consensus 566 ~~~q~~~~~le~~~~el~~~lq~~q 590 (637)
.++.+||..|..++..|++.++..+
T Consensus 112 ~ekK~Rc~yL~~KLsHIK~lI~~YD 136 (140)
T 1xaw_A 112 KSKKNHCKQLKSKLSHIKKMVGDYD 136 (140)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4556677777777777766665544
No 371
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=74.24 E-value=45 Score=29.27 Aligned_cols=18 Identities=39% Similarity=0.604 Sum_probs=8.0
Q ss_pred HHHHHHHHhHHHHHHHHH
Q 006645 580 AELRQKLQTMETLQKELE 597 (637)
Q Consensus 580 ~el~~~lq~~q~~~~e~~ 597 (637)
.+.++++..+..+.+++.
T Consensus 124 eeyK~Kl~rv~~vkkeL~ 141 (152)
T 4fla_A 124 EEYKQKLARVTQVRKELK 141 (152)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 444444444444444443
No 372
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=73.74 E-value=39 Score=34.04 Aligned_cols=37 Identities=22% Similarity=0.186 Sum_probs=19.7
Q ss_pred hhHHHHHHHHHHHH----hHHHHHHHHHHHHHHHHHHHHHH
Q 006645 574 KLEVDVAELRQKLQ----TMETLQKELELLQRQKAASEQAA 610 (637)
Q Consensus 574 ~le~~~~el~~~lq----~~q~~~~e~~~~~~~~~~~~~~~ 610 (637)
.|++++.-||+++. .+.-|+.-|+.++.+.+.+|-.+
T Consensus 117 eLe~~i~~lk~~V~~q~~~ir~Lq~~l~~q~~kiqRLE~~I 157 (390)
T 1deq_A 117 DLRSRIEILRRKVIEQVQRINLLQKNVRDQLVDMKRLEVDI 157 (390)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444333 34555555666666666666655
No 373
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=73.58 E-value=14 Score=37.07 Aligned_cols=23 Identities=13% Similarity=0.141 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Q 006645 594 KELELLQRQKAASEQAALNAKRQ 616 (637)
Q Consensus 594 ~e~~~~~~~~~~~~~~~~~~~r~ 616 (637)
.+++.++.++...+.++..++.+
T Consensus 128 a~l~~~~a~l~~a~a~l~~a~~~ 150 (341)
T 3fpp_A 128 AQIGTIDAQIKRNQASLDTAKTN 150 (341)
T ss_dssp HHHHHHHHHHHHTHHHHTTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444444444444555444433
No 374
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=73.53 E-value=46 Score=30.52 Aligned_cols=112 Identities=12% Similarity=0.112 Sum_probs=56.5
Q ss_pred eEEEeCCEEEEEEccCCCCCcceeEEEEECCC---CceEeeccC-CCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCce
Q 006645 250 SLIPWENKLLSIAGHTKDPSEIIQVKVFDLQT---CSWSTLKTY-GKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDL 325 (637)
Q Consensus 250 s~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t---~~W~~~~~~-g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i 325 (637)
+++.+++.+|+|-|. .+|+++... +-=..++.. ..+|.. ...+....++++|+|-| +..
T Consensus 10 A~~~~~g~~~fFkg~--------~~w~~~~~~~~~gyP~~I~~~w~glP~~-iDAa~~~~~g~~yfFkg--------~~y 72 (196)
T 3c7x_A 10 TVAMLRGEMFVFKER--------WFWRVRNNQVMDGYPMPIGQFWRGLPAS-INTAYERKDGKFVFFKG--------DKH 72 (196)
T ss_dssp EEEEETTEEEEEETT--------EEEEEETTEECTTCSEEHHHHSTTCCSS-CCEEEECTTSCEEEEET--------TEE
T ss_pred EEEEcCCEEEEEECC--------EEEEEECCccCCCCceEhhHhccCCCCC-ccEEEEeCCCcEEEecC--------CEE
Confidence 344678999999875 466665321 000111111 013432 22222223678999976 357
Q ss_pred EEEECCCCce---EEecCCC-CCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 326 HILDLETMTW---DEIDAVG-VPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 326 ~~yd~~t~~W---~~~~~~~-~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
|+|+-.+... ..+...+ ..|......+.....++++|+|-|. ..|+||..+++
T Consensus 73 w~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG~-------~yw~yd~~~~~ 129 (196)
T 3c7x_A 73 WVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGN-------KYYRFNEELRA 129 (196)
T ss_dssp EEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEETT-------EEEEEETTTTE
T ss_pred EEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEECC-------EEEEEeCCccc
Confidence 8887542211 1222211 1232223322222246789999873 58999987654
No 375
>3ajw_A Flagellar FLIJ protein; flagellum, type III secretion, coiled-coil, protein transpor; 2.10A {Salmonella typhimurium}
Probab=73.28 E-value=21 Score=30.99 Aligned_cols=36 Identities=17% Similarity=0.123 Sum_probs=23.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 006645 530 LSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQL 565 (637)
Q Consensus 530 ~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql 565 (637)
..+...+....++.++..+.++.++.....++..++
T Consensus 21 ed~a~~~l~~a~~~~~~~~~~L~~L~~~~~~y~~~~ 56 (150)
T 3ajw_A 21 VDDAARLLGEMRRGCQQAEEQLKMLIDYQNEYRSNL 56 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334555556666777777777777777776665543
No 376
>3etw_A Adhesin A; antiparallel helix-loop-helix, leucine chain, cell adhesin, cell adhesion; 2.00A {Fusobacterium nucleatum} PDB: 3ety_A 3etx_A 3etz_A 2gl2_A
Probab=72.84 E-value=21 Score=29.82 Aligned_cols=15 Identities=20% Similarity=0.206 Sum_probs=6.0
Q ss_pred HHHHHHhHHHHHHHH
Q 006645 582 LRQKLQTMETLQKEL 596 (637)
Q Consensus 582 l~~~lq~~q~~~~e~ 596 (637)
..+.+.+++.+.++|
T Consensus 73 y~~l~k~Y~~~~keL 87 (119)
T 3etw_A 73 YQELASKYEDALKKL 87 (119)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 334444444333333
No 377
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=72.77 E-value=85 Score=31.77 Aligned_cols=109 Identities=15% Similarity=0.153 Sum_probs=59.6
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLET 332 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t 332 (637)
++.+++.|+.++ .+.+||+.+.+-...-. .+.......++.+ ++.+++.|+.+ ..|.+||+.+
T Consensus 181 ~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~---~~~h~~~v~~~~~s~~~~~l~s~~~d------g~i~iwd~~~ 245 (437)
T 3gre_A 181 EKSLLVALTNLS------RVIIFDIRTLERLQIIE---NSPRHGAVSSICIDEECCVLILGTTR------GIIDIWDIRF 245 (437)
T ss_dssp SCEEEEEEETTS------EEEEEETTTCCEEEEEE---CCGGGCCEEEEEECTTSCEEEEEETT------SCEEEEETTT
T ss_pred CCCEEEEEeCCC------eEEEEeCCCCeeeEEEc---cCCCCCceEEEEECCCCCEEEEEcCC------CeEEEEEcCC
Confidence 467778877643 58899998866433322 1111222333334 56777777764 4589999987
Q ss_pred CceEEecCCCCCCCcccccEEEEE----cCCEEEEEeCCCCCCCcCcEEEEECCCCee
Q 006645 333 MTWDEIDAVGVPPSPRSDHAAAVH----AERYLLIFGGGSHAACFNDLHVLDLQTMEW 386 (637)
Q Consensus 333 ~~W~~~~~~~~~p~~r~~h~~~~~----~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W 386 (637)
......-.. +....-.+++.. .++.+++.|+.+ ..|.+||+.+..-
T Consensus 246 ~~~~~~~~~---~~~~~v~~~~~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~ 295 (437)
T 3gre_A 246 NVLIRSWSF---GDHAPITHVEVCQFYGKNSVIVVGGSSK-----TFLTIWNFVKGHC 295 (437)
T ss_dssp TEEEEEEBC---TTCEEEEEEEECTTTCTTEEEEEEESTT-----EEEEEEETTTTEE
T ss_pred ccEEEEEec---CCCCceEEEEeccccCCCccEEEEEcCC-----CcEEEEEcCCCcE
Confidence 655332111 111111122111 245566666643 3588999887654
No 378
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=72.68 E-value=72 Score=30.92 Aligned_cols=103 Identities=17% Similarity=0.167 Sum_probs=57.2
Q ss_pred CEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCccee
Q 006645 196 DKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEIIQ 273 (637)
Q Consensus 196 ~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~~ 273 (637)
+.+++.|+.+ ..+.+||+.+.......... .... .-.++.+ ++.+++.|+.++ .
T Consensus 54 g~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~-----------~h~~--~v~~~~~~~~~~~l~s~~~dg------~ 109 (368)
T 3mmy_A 54 GNFLIAGSWA-----NDVRCWEVQDSGQTIPKAQQ-----------MHTG--PVLDVCWSDDGSKVFTASCDK------T 109 (368)
T ss_dssp SEEEEEEETT-----SEEEEEEECTTSCEEEEEEE-----------ECSS--CEEEEEECTTSSEEEEEETTS------E
T ss_pred ceEEEEECCC-----CcEEEEEcCCCCceeEEEec-----------cccC--CEEEEEECcCCCEEEEEcCCC------c
Confidence 3777877743 35888898873332211111 0011 1122223 566666776543 6
Q ss_pred EEEEECCCCceEeeccCCCCCCCCCceEEEEE----CCEEEEEeCCCCCCCCCCceEEEECCCCc
Q 006645 274 VKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV----GTSLVIFGGEDAKRSLLNDLHILDLETMT 334 (637)
Q Consensus 274 v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~n~i~~yd~~t~~ 334 (637)
+.+||+.+......... .....++.+ ++.+++.|+.+ ..+.+||+.+.+
T Consensus 110 v~iwd~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~ 162 (368)
T 3mmy_A 110 AKMWDLSSNQAIQIAQH------DAPVKTIHWIKAPNYSCVMTGSWD------KTLKFWDTRSSN 162 (368)
T ss_dssp EEEEETTTTEEEEEEEC------SSCEEEEEEEECSSCEEEEEEETT------SEEEEECSSCSS
T ss_pred EEEEEcCCCCceeeccc------cCceEEEEEEeCCCCCEEEEccCC------CcEEEEECCCCc
Confidence 88999998876655321 111222222 55778888753 458899987654
No 379
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=72.58 E-value=1.6e+02 Score=34.78 Aligned_cols=190 Identities=14% Similarity=0.083 Sum_probs=105.6
Q ss_pred CCcceeEEEECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe---CCEEEEE
Q 006645 185 ARYEHGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW---ENKLLSI 261 (637)
Q Consensus 185 ~R~~~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~---~~~lyv~ 261 (637)
.-.++++....+.+ ++|.-....+...++.|+.....|-.-.+.. .........|++++.. +...||+
T Consensus 333 ~q~GfSa~~t~d~~-~~GapG~~~w~G~v~~~~~~~~~~~~~~~~~--------~~~~~~sylGySVa~~~~~g~~~~v~ 403 (1095)
T 3k6s_A 333 AQEGFSAVFTPDGP-VLGAVGSFTWSGGAFLYPPNMSPTFINMSQE--------NVDMRDSYLGYSTELALWKGVQSLVL 403 (1095)
T ss_dssp CCTTSSEECCTTCC-EEEESCSTTTTBEEEECCSSSCCEEECCCSS--------CCCCCSCCBTSSEECCCCSSSCEEEE
T ss_pred ccccccceecCCcc-eEcccccCCccceeEEecCCCcceeeccccc--------cccccccccceeeEEeccCCceEEEE
Confidence 34667777676666 7886433445566788877654443221110 0122345567777653 2345677
Q ss_pred EccCCCCCcceeEEEEECCCCceEeec-cCCCCCCCCCceEEEEEC------CEEEEEeCCCC-CCCCCCceEEEECCC-
Q 006645 262 AGHTKDPSEIIQVKVFDLQTCSWSTLK-TYGKPPVSRGGQSVTLVG------TSLVIFGGEDA-KRSLLNDLHILDLET- 332 (637)
Q Consensus 262 GG~~~~~~~~~~v~~yd~~t~~W~~~~-~~g~~p~~r~~~~~~~~~------~~lyv~GG~~~-~~~~~n~i~~yd~~t- 332 (637)
|--.. .....+++|......|.... ..|.-.....++++++.+ ..|+++|.-.. .......+|+|....
T Consensus 404 GAP~~--~~~G~V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~ 481 (1095)
T 3k6s_A 404 GAPRY--QHTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRG 481 (1095)
T ss_dssp EETTG--GGTCEEEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSS
T ss_pred Ecccc--cccceEEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCC
Confidence 64321 23457899988888898764 334444556777777642 25777774321 111245689986543
Q ss_pred -CceEEecCC-CCC--CCcccccEEEEEcC----C--EEEEEeCCCCCCCcCcEEEEECCCC-ee
Q 006645 333 -MTWDEIDAV-GVP--PSPRSDHAAAVHAE----R--YLLIFGGGSHAACFNDLHVLDLQTM-EW 386 (637)
Q Consensus 333 -~~W~~~~~~-~~~--p~~r~~h~~~~~~~----~--~l~v~GG~~~~~~~~dl~~~d~~t~-~W 386 (637)
..|...... +.. +..|++++++.++| + .| ++|.-........+|+|.-... .|
T Consensus 482 ~~~~~~~~~l~g~~~~~~~~FG~sva~~gD~NgDG~~Dl-~VGAP~~~~~~G~vyi~~g~~~~g~ 545 (1095)
T 3k6s_A 482 WRRWWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDV-VIGAPGEEENRGAVYLFHGVLGPSI 545 (1095)
T ss_dssp TTCCCSCSSCCCCCSCSSCCBTSCEEEEECSSSSSCCEE-EEECTTTTTSCCBEEEEEBCSSSCB
T ss_pred CcceeeeEEeecccCCccccCccceEeecccCCCCCcCE-EEeCCcCCCCCCEEEEecCCCCCCc
Confidence 457643222 221 45788888887521 2 24 4443222233457899987665 45
No 380
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=72.58 E-value=2.3 Score=42.82 Aligned_cols=70 Identities=16% Similarity=0.171 Sum_probs=49.3
Q ss_pred cccCCCChHHHHHHhhhheeeeeCCCCCC--CCCCCC---H---h--------h----hHHHHHHhcC---CCCCHH--H
Q 006645 35 ELTSKFSNDSALLLYALYQQATVGPCNVP--KPSSWS---P---V--------E----QSKWKSWQGL---GNMATT--E 89 (637)
Q Consensus 35 ~~~~~~~~~~~l~ly~l~kqa~~g~~~~~--~p~~~~---~---~--------~----~~k~~aw~~~---~~~s~~--~ 89 (637)
.+.-..+.++.++|=||--||..||++.. .|+.++ + . . ..=..+|+++ .|||++ +
T Consensus 127 ~G~~~c~~e~a~~LAAl~~q~e~Gd~~~~~~~~~~l~~~~l~~~lP~~~~~~~~~~~~~~I~~~h~~~~~~~g~s~~~a~ 206 (322)
T 4dxa_B 127 KGFYTAPDAKLITLASLLLQIVYGNYESKKHKQGFLNEENLKSIVPVTKLKSKAPHWTNRILHEYKNLSTSEGVSKEMHH 206 (322)
T ss_dssp HTCCCCCHHHHHHHHHHHHHHHHCSCCHHHHSSSCSCHHHHTTTSCTTTTTTTGGGSHHHHHHHHHHHHC--CCCCCHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCCcccccccccchhhhhhhCCHHHHhcCHHHHHHHHHHHHHhcccccCCChhHHH
Confidence 34567889999999999999999998642 344332 1 0 1 1224679999 999975 4
Q ss_pred HHHHHHHHHHHhCCCc
Q 006645 90 AMRLFVKILEEEDPGW 105 (637)
Q Consensus 90 a~~~yv~~~~~~~~~~ 105 (637)
|+..|++++.++ |.|
T Consensus 207 a~~~yL~~~~~l-p~y 221 (322)
T 4dxa_B 207 LQRMFLQNCWEI-PTY 221 (322)
T ss_dssp HHHHHHHHHHTS-TTT
T ss_pred HHHHHHHHHhcC-CCc
Confidence 699999999854 544
No 381
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=72.20 E-value=69 Score=30.54 Aligned_cols=151 Identities=7% Similarity=0.086 Sum_probs=72.1
Q ss_pred CEEEEEcccCCCcccCcEEEEEccCC-------eEEEeeecccccCCCCCCCCCCCCcccceEEEe--C--CEEEEEEcc
Q 006645 196 DKMYIYGGNHNGRYLSDMHILDLRSW-------AWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--E--NKLLSIAGH 264 (637)
Q Consensus 196 ~~lyv~GG~~~~~~~~~v~~yd~~t~-------~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~--~~lyv~GG~ 264 (637)
+.+++.|+.+ ..+.+||+.+. .|..+.... ........+.+ + +.+++.|+.
T Consensus 71 ~~~l~s~~~d-----g~v~vwd~~~~~~~~~~~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~~~l~~~~~ 132 (351)
T 3f3f_A 71 GRIIASASYD-----KTVKLWEEDPDQEECSGRRWNKLCTLN-------------DSKGSLYSVKFAPAHLGLKLACLGN 132 (351)
T ss_dssp CSEEEEEETT-----SCEEEEEECTTSCTTSSCSEEEEEEEC-------------CCSSCEEEEEECCGGGCSEEEEEET
T ss_pred CCEEEEEcCC-----CeEEEEecCCCcccccccCcceeeeec-------------ccCCceeEEEEcCCCCCcEEEEecC
Confidence 6677777743 35788888764 344443321 11111222333 3 667777775
Q ss_pred CCCCCcceeEEEEECCCCc----eEeecc---CCCCC-CCCCceEEEEE-----CCEEEEEeCCCCCCCCCCceEEEECC
Q 006645 265 TKDPSEIIQVKVFDLQTCS----WSTLKT---YGKPP-VSRGGQSVTLV-----GTSLVIFGGEDAKRSLLNDLHILDLE 331 (637)
Q Consensus 265 ~~~~~~~~~v~~yd~~t~~----W~~~~~---~g~~p-~~r~~~~~~~~-----~~~lyv~GG~~~~~~~~n~i~~yd~~ 331 (637)
++ .+.+||+.+.. |..... ....+ .......+..+ ++.+++.|+.++ .+..++..
T Consensus 133 dg------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~------~~~~~~~~ 200 (351)
T 3f3f_A 133 DG------ILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQ------AIIYQRGK 200 (351)
T ss_dssp TC------EEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTE------EEEEEECT
T ss_pred CC------cEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCC------cEEEEccC
Confidence 43 58888887644 221110 00011 11112222222 256777776532 34455555
Q ss_pred CCceEEecCCCCCCCcccccEEEEEcCC----EEEEEeCCCCCCCcCcEEEEECCC
Q 006645 332 TMTWDEIDAVGVPPSPRSDHAAAVHAER----YLLIFGGGSHAACFNDLHVLDLQT 383 (637)
Q Consensus 332 t~~W~~~~~~~~~p~~r~~h~~~~~~~~----~l~v~GG~~~~~~~~dl~~~d~~t 383 (637)
......+.... .....-.+++...++ .+++.|+.++ .|.+||+.+
T Consensus 201 ~~~~~~~~~~~--~h~~~i~~~~~~p~~~~~~~~l~s~~~dg-----~i~iwd~~~ 249 (351)
T 3f3f_A 201 DGKLHVAAKLP--GHKSLIRSISWAPSIGRWYQLIATGCKDG-----RIRIFKITE 249 (351)
T ss_dssp TSCEEEEEECC--CCCSCEEEEEECCCSSCSSEEEEEEETTS-----CEEEEEEEE
T ss_pred CCceeeeeecC--CCCcceeEEEECCCCCCcceEEEEEcCCC-----eEEEEeCCC
Confidence 66654443221 111122334444444 6888887643 366676654
No 382
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=72.04 E-value=5.7 Score=40.07 Aligned_cols=24 Identities=8% Similarity=0.057 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 006645 589 METLQKELELLQRQKAASEQAALN 612 (637)
Q Consensus 589 ~q~~~~e~~~~~~~~~~~~~~~~~ 612 (637)
++.++.+++.++.++...+.++..
T Consensus 130 l~~~~a~l~~a~a~l~~a~~~l~~ 153 (341)
T 3fpp_A 130 IGTIDAQIKRNQASLDTAKTNLDY 153 (341)
T ss_dssp HHHHHHHHHHTHHHHTTTTTTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhC
Confidence 344445555555555444444433
No 383
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=71.50 E-value=47 Score=28.23 Aligned_cols=25 Identities=8% Similarity=-0.003 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 006645 591 TLQKELELLQRQKAASEQAALNAKR 615 (637)
Q Consensus 591 ~~~~e~~~~~~~~~~~~~~~~~~~r 615 (637)
+++++++.++.+....++++++..+
T Consensus 106 ~l~~~l~~l~~~i~~~~~~l~~~~~ 130 (133)
T 1fxk_C 106 KMGENLRAITDIMMKLSPQAEELLA 130 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4555566666666666666666543
No 384
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=71.20 E-value=1.2 Score=45.89 Aligned_cols=66 Identities=8% Similarity=0.085 Sum_probs=31.0
Q ss_pred EEECCEEEEEcccCCCcccCcEEEEEccCC--eEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCC
Q 006645 192 AVVQDKMYIYGGNHNGRYLSDMHILDLRSW--AWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPS 269 (637)
Q Consensus 192 ~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~ 269 (637)
++.++.||+.+. + ..++.+|..++ .|+.-. . + ...+.+..++.+|+.|+.++
T Consensus 6 ~v~~~~v~~gs~-d-----g~v~a~d~~tG~~~W~~~~--~---------~------~~s~p~~~~g~~~v~~s~dg--- 59 (369)
T 2hz6_A 6 TLPETLLFVSTL-D-----GSLHAVSKRTGSIKWTLKE--D---------P------VLQVPTHVEEPAFLPDPNDG--- 59 (369)
T ss_dssp --CTTEEEEEET-T-----SEEEEEETTTCCEEEEEEC--C---------C------SCCCC-----CCEEECTTTC---
T ss_pred eeeCCEEEEEcC-C-----CEEEEEECCCCCEEEEecC--C---------C------ceecceEcCCCEEEEeCCCC---
Confidence 334566776543 1 36899999886 476532 1 0 00112234566777765432
Q ss_pred cceeEEEEECCCC--ceEe
Q 006645 270 EIIQVKVFDLQTC--SWST 286 (637)
Q Consensus 270 ~~~~v~~yd~~t~--~W~~ 286 (637)
.++++|..++ .|..
T Consensus 60 ---~l~a~d~~tG~~~w~~ 75 (369)
T 2hz6_A 60 ---SLYTLGSKNNEGLTKL 75 (369)
T ss_dssp ---CEEEC-----CCSEEC
T ss_pred ---EEEEEECCCCceeeee
Confidence 4889998665 4654
No 385
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=71.01 E-value=1.1e+02 Score=32.49 Aligned_cols=114 Identities=11% Similarity=0.049 Sum_probs=57.5
Q ss_pred CEEEEEEccCCCCCcceeEEEEEC--CCCceEeeccCCCCCCCCCceEEEEEC-CEEEEEeCCCCCCCCCCceEEEECCC
Q 006645 256 NKLLSIAGHTKDPSEIIQVKVFDL--QTCSWSTLKTYGKPPVSRGGQSVTLVG-TSLVIFGGEDAKRSLLNDLHILDLET 332 (637)
Q Consensus 256 ~~lyv~GG~~~~~~~~~~v~~yd~--~t~~W~~~~~~g~~p~~r~~~~~~~~~-~~lyv~GG~~~~~~~~n~i~~yd~~t 332 (637)
+++.+.+..... .....++..++ ....- .+.. .+..+ ..+...+ +.+++..+.. +.+.+||+.+
T Consensus 75 d~~l~~~~~~~g-~~~~~l~~~~~~~~g~~~-~l~~---~~~~~--~~~~s~dg~~~~~~s~~~------~~~~l~d~~~ 141 (582)
T 3o4h_A 75 GRVILVRDVSKG-AEQHALFKVNTSRPGEEQ-RLEA---VKPMR--ILSGVDTGEAVVFTGATE------DRVALYALDG 141 (582)
T ss_dssp SEEEEEEECSTT-SCCEEEEEEETTSTTCCE-ECTT---SCSBE--EEEEEECSSCEEEEEECS------SCEEEEEEET
T ss_pred CeEEEEeccCCC-CcceEEEEEeccCCCccc-cccC---CCCce--eeeeCCCCCeEEEEecCC------CCceEEEccC
Confidence 355555443111 23446777777 43322 3321 11111 2233333 4555554432 2344789888
Q ss_pred CceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecc
Q 006645 333 MTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPT 390 (637)
Q Consensus 333 ~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~ 390 (637)
..-..+... +. .+.+...+++.+++++.+... ...|+++|+.+..+..+.
T Consensus 142 g~~~~l~~~---~~----~~~~~spDG~~la~~~~~~~~-~~~i~~~d~~~g~~~~l~ 191 (582)
T 3o4h_A 142 GGLRELARL---PG----FGFVSDIRGDLIAGLGFFGGG-RVSLFTSNLSSGGLRVFD 191 (582)
T ss_dssp TEEEEEEEE---SS----CEEEEEEETTEEEEEEEEETT-EEEEEEEETTTCCCEEEC
T ss_pred CcEEEeecC---CC----ceEEECCCCCEEEEEEEcCCC-CeEEEEEcCCCCCceEee
Confidence 877766422 11 334443455455555433211 245999999998887764
No 386
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=70.91 E-value=73 Score=30.24 Aligned_cols=136 Identities=14% Similarity=0.138 Sum_probs=68.8
Q ss_pred CcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcceeEEEEECCCCceEeec
Q 006645 211 SDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLK 288 (637)
Q Consensus 211 ~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 288 (637)
+.+.++|+.+++....-... .....-.++.+ ++++++.|+.+. .+.++|+.+++-....
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~-------------~~~~~V~~v~~~~~~~~l~sgs~Dg------~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQME-------------QPGEYISSVAWIKEGNYLAVGTSSA------EVQLWDVQQQKRLRNM 105 (318)
T ss_dssp TEEEEEETTTCCEEEEEECC-------------STTCCEEEEEECTTSSEEEEEETTS------EEEEEETTTTEEEEEE
T ss_pred CEEEEEECCCCCEEEEEEec-------------CCCCeEEEEEECCCCCEEEEEECCC------cEEEeecCCceeEEEe
Confidence 35788888887765543211 11111123333 567777887654 5888999887654432
Q ss_pred cCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCC
Q 006645 289 TYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGS 368 (637)
Q Consensus 289 ~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~ 368 (637)
.. ......+....+.+++.|+.+ ..+..++..+.........+ ............++.+++.|+.+
T Consensus 106 ~~-----h~~~~~~~~~~~~~l~s~~~~------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~s~~~d 171 (318)
T 4ggc_A 106 TS-----HSARVGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLSG---HSQEVCGLRWAPDGRHLASGGND 171 (318)
T ss_dssp EC-----CSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEEC---CSSCEEEEEECTTSSEEEEEETT
T ss_pred cC-----ccceEEEeecCCCEEEEEecC------CceEeeecCCCceeEEEEcC---ccCceEEEEEcCCCCEEEEEecC
Confidence 21 112223344455566666543 33555665544332221111 11112223333445566676654
Q ss_pred CCCCcCcEEEEECCCC
Q 006645 369 HAACFNDLHVLDLQTM 384 (637)
Q Consensus 369 ~~~~~~dl~~~d~~t~ 384 (637)
..+.+||+.+.
T Consensus 172 -----~~i~iwd~~~~ 182 (318)
T 4ggc_A 172 -----NLVNVWPSAPG 182 (318)
T ss_dssp -----SCEEEEESSCB
T ss_pred -----cceeEEECCCC
Confidence 34778888754
No 387
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=70.41 E-value=23 Score=31.11 Aligned_cols=25 Identities=16% Similarity=0.199 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 006645 591 TLQKELELLQRQKAASEQAALNAKR 615 (637)
Q Consensus 591 ~~~~e~~~~~~~~~~~~~~~~~~~r 615 (637)
++++.++.++.+....+..+++..+
T Consensus 116 ~l~~~l~~l~~~i~~~~~~l~~l~~ 140 (151)
T 2zdi_C 116 KTQGALAELEKRIGEVARKAQEVQQ 140 (151)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555666666666666666654
No 388
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=70.21 E-value=87 Score=30.82 Aligned_cols=173 Identities=9% Similarity=0.020 Sum_probs=87.6
Q ss_pred ceEEecccCCCCCCCCcceeEEEE-CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccc
Q 006645 171 DQWIAPPISGQRPKARYEHGAAVV-QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGH 249 (637)
Q Consensus 171 ~~W~~~~~~g~~p~~R~~~a~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~h 249 (637)
.+|..+.. |....-.+++.. .+.+|++|- . ..+++-.-...+|+.+.... ........
T Consensus 25 ~~W~~~~~----~~~~~~~~v~~~~~~~~~~~G~-~-----g~i~~s~DgG~tW~~~~~~~-----------~~~~~~~~ 83 (327)
T 2xbg_A 25 NPWEAIQL----PTTATILDMSFIDRHHGWLVGV-N-----ATLMETRDGGQTWEPRTLVL-----------DHSDYRFN 83 (327)
T ss_dssp CCEEEEEC----SCSSCEEEEEESSSSCEEEEET-T-----TEEEEESSTTSSCEECCCCC-----------SCCCCEEE
T ss_pred CCceEeec----CCCCcEEEEEECCCCcEEEEcC-C-----CeEEEeCCCCCCCeECCCCC-----------CCCCccEE
Confidence 38998763 323333344333 467888653 1 12443322245899875321 01111223
Q ss_pred eEEEeCCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEE-ECCEEEEEeCCCCCCCCCCceEEE
Q 006645 250 SLIPWENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTL-VGTSLVIFGGEDAKRSLLNDLHIL 328 (637)
Q Consensus 250 s~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~n~i~~y 328 (637)
++...++.+|++|.. . .++.-+=.-.+|..+......|. ..+.++. -++.+|+.|.. ..+++-
T Consensus 84 ~i~~~~~~~~~~g~~-g------~i~~S~DgG~tW~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~-------g~v~~S 147 (327)
T 2xbg_A 84 SVSFQGNEGWIVGEP-P------IMLHTTDGGQSWSQIPLDPKLPG--SPRLIKALGNGSAEMITNV-------GAIYRT 147 (327)
T ss_dssp EEEEETTEEEEEEET-T------EEEEESSTTSSCEECCCCTTCSS--CEEEEEEEETTEEEEEETT-------CCEEEE
T ss_pred EEEecCCeEEEEECC-C------eEEEECCCCCCceECccccCCCC--CeEEEEEECCCCEEEEeCC-------ccEEEE
Confidence 334446788887532 1 33332223468999864211221 1233333 36788887742 124443
Q ss_pred ECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECC-CCeeEecc
Q 006645 329 DLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQ-TMEWSRPT 390 (637)
Q Consensus 329 d~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~-t~~W~~l~ 390 (637)
+-.-.+|+.+... .+...++++...++.+|++|-. ..++.-+-. ..+|+.+.
T Consensus 148 ~DgG~tW~~~~~~----~~~~~~~~~~~~~~~~~~~g~~------G~~~~S~d~gG~tW~~~~ 200 (327)
T 2xbg_A 148 KDSGKNWQALVQE----AIGVMRNLNRSPSGEYVAVSSR------GSFYSTWEPGQTAWEPHN 200 (327)
T ss_dssp SSTTSSEEEEECS----CCCCEEEEEECTTSCEEEEETT------SSEEEEECTTCSSCEEEE
T ss_pred cCCCCCCEEeecC----CCcceEEEEEcCCCcEEEEECC------CcEEEEeCCCCCceeECC
Confidence 3335689998632 2233455555556667766632 135554333 57899874
No 389
>2lw9_A Unconventionnal myosin-X; MYO10 anti-CC, motor protein; NMR {Homo sapiens}
Probab=70.10 E-value=5.3 Score=27.26 Aligned_cols=12 Identities=25% Similarity=0.631 Sum_probs=5.3
Q ss_pred hhHHHHHHHHHH
Q 006645 574 KLEVDVAELRQK 585 (637)
Q Consensus 574 ~le~~~~el~~~ 585 (637)
.||+++..||++
T Consensus 10 RLErEIE~Lqrq 21 (51)
T 2lw9_A 10 RLEKEIEDLQRM 21 (51)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 444444444433
No 390
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=70.06 E-value=32 Score=37.53 Aligned_cols=121 Identities=17% Similarity=0.187 Sum_probs=65.7
Q ss_pred EEEeCCEEEEEEccCCCCCcceeEEEEECCCCc--eEeeccCCCCCCCCC---ceEEEEECCEEEEEeCCCCCCCCCCce
Q 006645 251 LIPWENKLLSIAGHTKDPSEIIQVKVFDLQTCS--WSTLKTYGKPPVSRG---GQSVTLVGTSLVIFGGEDAKRSLLNDL 325 (637)
Q Consensus 251 ~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~g~~p~~r~---~~~~~~~~~~lyv~GG~~~~~~~~n~i 325 (637)
-+..++.||+.+.. +.++++|..|++ |+.-........+.+ ..+.++.+++||+... ...+
T Consensus 64 P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~-------dg~l 129 (582)
T 1flg_A 64 AIVSDGVIYVTASY-------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL-------DASV 129 (582)
T ss_dssp CEEETTEEEEEETT-------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET-------TTEE
T ss_pred cEEECCEEEEEcCC-------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC-------CCEE
Confidence 35679999998763 138999998765 887643211111111 1234567888887532 3469
Q ss_pred EEEECCCCc--eEEecCCCCCCCcc--cccEEEEEcC----CEEEEEeCCCC-CCCcCcEEEEECCCCe--eEe
Q 006645 326 HILDLETMT--WDEIDAVGVPPSPR--SDHAAAVHAE----RYLLIFGGGSH-AACFNDLHVLDLQTME--WSR 388 (637)
Q Consensus 326 ~~yd~~t~~--W~~~~~~~~~p~~r--~~h~~~~~~~----~~l~v~GG~~~-~~~~~dl~~~d~~t~~--W~~ 388 (637)
+.+|..|.+ |+.-... +... ...+-++..+ ..++++|.... ...-..++.||..+++ |+.
T Consensus 130 ~AlD~~TG~~~W~~~~~~---~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 130 VALNKNTGKVVWKKKFAD---HGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EEEESSSCCEEEEEECSC---GGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred EEEECCCCCEEeeecCCC---CCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeec
Confidence 999998764 8765321 1111 1112233322 11344443211 1123469999998764 865
No 391
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=69.54 E-value=5.9 Score=29.53 Aligned_cols=31 Identities=19% Similarity=0.292 Sum_probs=13.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 006645 531 SKEKLQSIQLKQDLTEAESQNTDLYKELQSV 561 (637)
Q Consensus 531 ~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~ 561 (637)
..+...+..|+..|.+++.++++++.+|+.+
T Consensus 21 ~~Kde~I~eLE~~L~~kd~eI~eLr~~LdK~ 51 (67)
T 1zxa_A 21 MLKEERIKELEKRLSEKEEEIQELKRKLHKC 51 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334444444444444444444444443
No 392
>3tul_A Cell invasion protein SIPB; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.79A {Salmonella enterica subsp}
Probab=69.43 E-value=54 Score=28.15 Aligned_cols=43 Identities=12% Similarity=0.207 Sum_probs=25.2
Q ss_pred HHHHhhhhhhHHHHHHHHHHHHhHH-------HHHHHHHHHHHHHHHHHH
Q 006645 566 AAEQSRCFKLEVDVAELRQKLQTME-------TLQKELELLQRQKAASEQ 608 (637)
Q Consensus 566 ~~~q~~~~~le~~~~el~~~lq~~q-------~~~~e~~~~~~~~~~~~~ 608 (637)
-..++.+..+|.++.+++.+|.+++ +++..+++++.+..+..|
T Consensus 72 ~sA~~~~d~lekKl~~aq~kL~~L~P~~P~Yak~~a~~~q~~~d~~~~~~ 121 (158)
T 3tul_A 72 DTAKSVYDAATKKLTQAQNKLQSLDPADPGYAQAEAAVEQAGKEATEAKE 121 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTC-------CHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 3445566777777888888887733 345555555554444333
No 393
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=69.38 E-value=80 Score=30.08 Aligned_cols=107 Identities=16% Similarity=0.216 Sum_probs=54.7
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCC--eEEEeeecccccCCCCCCCCCCCCcccceEEEe----CCEEEEEEccCCCC
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSW--AWSKIQAKAVAESTESPSPALLTPCAGHSLIPW----ENKLLSIAGHTKDP 268 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~----~~~lyv~GG~~~~~ 268 (637)
++.+++.|+.+ ..+.+||+.+. .+..+.... .....-.++.+ ++.+++.|+.++
T Consensus 22 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~-------------~~~~~v~~~~~~~~~d~~~l~s~~~dg-- 81 (351)
T 3f3f_A 22 YGRHVATCSSD-----QHIKVFKLDKDTSNWELSDSWR-------------AHDSSIVAIDWASPEYGRIIASASYDK-- 81 (351)
T ss_dssp SSSEEEEEETT-----SEEEEEEECSSSCCEEEEEEEE-------------CCSSCEEEEEECCGGGCSEEEEEETTS--
T ss_pred CCCEEEEeeCC-----CeEEEEECCCCCCcceecceec-------------cCCCcEEEEEEcCCCCCCEEEEEcCCC--
Confidence 45566666633 35777887753 444433321 11111223333 367778887754
Q ss_pred CcceeEEEEECCCC-------ceEeeccCCCCCCCCCceEEEEE--C--CEEEEEeCCCCCCCCCCceEEEECCCCc
Q 006645 269 SEIIQVKVFDLQTC-------SWSTLKTYGKPPVSRGGQSVTLV--G--TSLVIFGGEDAKRSLLNDLHILDLETMT 334 (637)
Q Consensus 269 ~~~~~v~~yd~~t~-------~W~~~~~~g~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~n~i~~yd~~t~~ 334 (637)
.+.+||+.+. .|..+... ........++.+ + +.+++.|+.+ ..+.+||+.+..
T Consensus 82 ----~v~vwd~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~~~~~d------g~v~iwd~~~~~ 145 (351)
T 3f3f_A 82 ----TVKLWEEDPDQEECSGRRWNKLCTL---NDSKGSLYSVKFAPAHLGLKLACLGND------GILRLYDALEPS 145 (351)
T ss_dssp ----CEEEEEECTTSCTTSSCSEEEEEEE---CCCSSCEEEEEECCGGGCSEEEEEETT------CEEEEEECSSTT
T ss_pred ----eEEEEecCCCcccccccCcceeeee---cccCCceeEEEEcCCCCCcEEEEecCC------CcEEEecCCChH
Confidence 4778887664 23333321 111222223333 2 5677777653 458889887543
No 394
>1cii_A Colicin IA; bacteriocin, ION channel formation, transmembrane protein; 3.00A {Escherichia coli} SCOP: f.1.1.1 h.4.3.1
Probab=69.23 E-value=73 Score=32.82 Aligned_cols=12 Identities=17% Similarity=0.440 Sum_probs=4.9
Q ss_pred hHHHHHHHHHHH
Q 006645 575 LEVDVAELRQKL 586 (637)
Q Consensus 575 le~~~~el~~~l 586 (637)
++..+.++.++.
T Consensus 403 ~~n~~a~~~~Ki 414 (602)
T 1cii_A 403 IRNQLSGINQKI 414 (602)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHhhhhhhHH
Confidence 333444444443
No 395
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=68.50 E-value=54 Score=27.80 Aligned_cols=33 Identities=15% Similarity=0.133 Sum_probs=15.0
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhh
Q 006645 519 LKAEKEELESSLSKEKLQSIQLKQDLTEAESQN 551 (637)
Q Consensus 519 l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~ 551 (637)
|.+..+.++..+.....+.++++..+.+.+..+
T Consensus 6 l~~~~q~l~~~~~~l~~~~~~l~~~i~e~~~~~ 38 (133)
T 1fxk_C 6 IVAQLNIYQSQVELIQQQMEAVRATISELEILE 38 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444444444444333
No 396
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=68.32 E-value=25 Score=36.66 Aligned_cols=22 Identities=9% Similarity=0.122 Sum_probs=9.1
Q ss_pred HHHHHHHHhhhhhHHHHHHHHH
Q 006645 519 LKAEKEELESSLSKEKLQSIQL 540 (637)
Q Consensus 519 l~~~~~~le~~~~e~~~~~~~l 540 (637)
|..++..+...|++++..+.++
T Consensus 86 L~kye~~V~~dl~~Le~~l~~i 107 (461)
T 3ghg_B 86 LLQQERPIRNSVDELNNNVEAV 107 (461)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcccchhhHHHHHHHHHHHH
Confidence 3334444444444444433333
No 397
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=68.08 E-value=67 Score=37.55 Aligned_cols=76 Identities=12% Similarity=0.139 Sum_probs=42.2
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCC----CCCCCCceEEEEC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDA----KRSLLNDLHILDL 330 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~----~~~~~n~i~~yd~ 330 (637)
+++.+++++.. ..++++|+.+++-..+... ........+..-+++.+++++.+. .....+.++++|+
T Consensus 389 DG~~la~~~~~------~~v~~~d~~tg~~~~~~~~---~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~ 459 (1045)
T 1k32_A 389 NGKFAVVANDR------FEIMTVDLETGKPTVIERS---REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDM 459 (1045)
T ss_dssp TSSEEEEEETT------SEEEEEETTTCCEEEEEEC---SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEET
T ss_pred CCCEEEEECCC------CeEEEEECCCCceEEeccC---CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEEC
Confidence 56666666542 3799999999887666421 111111112222555555555432 0112357999999
Q ss_pred CCCceEEec
Q 006645 331 ETMTWDEID 339 (637)
Q Consensus 331 ~t~~W~~~~ 339 (637)
.+.....+.
T Consensus 460 ~~g~~~~l~ 468 (1045)
T 1k32_A 460 EGRKIFAAT 468 (1045)
T ss_dssp TTTEEEECS
T ss_pred CCCcEEEee
Confidence 988755543
No 398
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=68.08 E-value=39 Score=25.96 Aligned_cols=61 Identities=23% Similarity=0.292 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 006645 533 EKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQTMETLQKELELLQRQK 603 (637)
Q Consensus 533 ~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~~q~~~~e~~~~~~~~ 603 (637)
.....+-|.|+|.++.-.+.+++.|-.+++..|..- .++++.||++|.. .+.+++-++.++
T Consensus 17 ~~~~~E~L~qEi~~Lr~kv~elEnErlQyEkKLKsT-------K~El~~Lq~qLe~---kd~ei~rL~~~l 77 (81)
T 3qh9_A 17 KQRKAEELLQELRHLKIKVEELENERNQYEWKLKAT-------KAEVAQLQEQVAL---KDAEIERLHSQL 77 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHH---HHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------HHHHHHHHHHHHh---hHHHHHHHHHHH
Confidence 334555677777777777777777666666555322 2444555544433 344555555443
No 399
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=67.47 E-value=48 Score=26.81 Aligned_cols=10 Identities=10% Similarity=0.072 Sum_probs=3.6
Q ss_pred HHHHHHHHHH
Q 006645 533 EKLQSIQLKQ 542 (637)
Q Consensus 533 ~~~~~~~l~~ 542 (637)
...+++.++.
T Consensus 20 l~~q~~~l~~ 29 (107)
T 1fxk_A 20 ISVQKQTVEM 29 (107)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 400
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=67.07 E-value=1.1 Score=46.90 Aligned_cols=26 Identities=27% Similarity=0.296 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHH
Q 006645 540 LKQDLTEAESQNTDLYKELQSVRGQL 565 (637)
Q Consensus 540 l~~~l~e~e~~~~~~~~elq~~~~ql 565 (637)
+.+++.+++..+++.+++|+..+.++
T Consensus 346 f~~~v~~~e~~l~~~e~~l~~~~~~~ 371 (427)
T 2qag_B 346 FVQRVKEKEAELKEAEKELHEKFDRL 371 (427)
T ss_dssp --------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555566666666666555554444
No 401
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=66.94 E-value=1e+02 Score=36.00 Aligned_cols=143 Identities=12% Similarity=0.052 Sum_probs=77.3
Q ss_pred CcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcceeEE-EEECCCCceEeecc
Q 006645 211 SDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQVK-VFDLQTCSWSTLKT 289 (637)
Q Consensus 211 ~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v~-~yd~~t~~W~~~~~ 289 (637)
..++.+|..+.....+... +..+..+.... +++.+++++. ...++ ++|+.+..-..+..
T Consensus 317 ~~i~~~~~~~~~~~~~~~~-------------~~~~~~~~~~s-dg~~l~~~s~------~~~l~~~~d~~~~~~~~l~~ 376 (1045)
T 1k32_A 317 GQAFIQDVSGTYVLKVPEP-------------LRIRYVRRGGD-TKVAFIHGTR------EGDFLGIYDYRTGKAEKFEE 376 (1045)
T ss_dssp TEEEEECTTSSBEEECSCC-------------SCEEEEEECSS-SEEEEEEEET------TEEEEEEEETTTCCEEECCC
T ss_pred CEEEEEcCCCCceEEccCC-------------CcceEEeeeEc-CCCeEEEEEC------CCceEEEEECCCCCceEecC
Confidence 4688888877765544211 11022222222 5555555443 24788 89998877655531
Q ss_pred CCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCC
Q 006645 290 YGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGG 367 (637)
Q Consensus 290 ~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~ 367 (637)
. ........+ +++.+++++. .+.++++|+.+.+-..+... ......+.+...++..+++++.
T Consensus 377 -----~-~~~~~~~~~SpDG~~la~~~~------~~~v~~~d~~tg~~~~~~~~----~~~~v~~~~~SpDG~~la~~~~ 440 (1045)
T 1k32_A 377 -----N-LGNVFAMGVDRNGKFAVVAND------RFEIMTVDLETGKPTVIERS----REAMITDFTISDNSRFIAYGFP 440 (1045)
T ss_dssp -----C-CCSEEEEEECTTSSEEEEEET------TSEEEEEETTTCCEEEEEEC----SSSCCCCEEECTTSCEEEEEEE
T ss_pred -----C-ccceeeeEECCCCCEEEEECC------CCeEEEEECCCCceEEeccC----CCCCccceEECCCCCeEEEEec
Confidence 1 112222333 5565666653 24799999999887666422 1111233444456655566543
Q ss_pred CC-----CCCcCcEEEEECCCCeeEec
Q 006645 368 SH-----AACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 368 ~~-----~~~~~dl~~~d~~t~~W~~l 389 (637)
.. ......++++|+.+.....+
T Consensus 441 ~~~~~~~~~~~~~i~l~d~~~g~~~~l 467 (1045)
T 1k32_A 441 LKHGETDGYVMQAIHVYDMEGRKIFAA 467 (1045)
T ss_dssp ECSSTTCSCCEEEEEEEETTTTEEEEC
T ss_pred CccccccCCCCCeEEEEECCCCcEEEe
Confidence 22 12235799999998875554
No 402
>3a7o_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.50A {Saccharomyces cerevisiae}
Probab=66.63 E-value=37 Score=25.19 Aligned_cols=26 Identities=15% Similarity=0.143 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHH
Q 006645 536 QSIQLKQDLTEAESQNTDLYKELQSV 561 (637)
Q Consensus 536 ~~~~l~~~l~e~e~~~~~~~~elq~~ 561 (637)
.+..|+.+|.+++.++.+++..+..+
T Consensus 19 ~l~~Lr~eL~~Ke~eI~~L~e~i~lk 44 (75)
T 3a7o_A 19 TLAILQKELKSKEQEIRRLKEVIALK 44 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45556666666666666555554444
No 403
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=66.53 E-value=15 Score=38.86 Aligned_cols=12 Identities=17% Similarity=0.202 Sum_probs=4.6
Q ss_pred hHHHHHHHHHHH
Q 006645 575 LEVDVAELRQKL 586 (637)
Q Consensus 575 le~~~~el~~~l 586 (637)
|.++..+|.+++
T Consensus 76 l~~~~~~l~~~i 87 (485)
T 3qne_A 76 LIAEKEKLSNEK 87 (485)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333334443333
No 404
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=66.47 E-value=97 Score=36.55 Aligned_cols=162 Identities=14% Similarity=0.098 Sum_probs=89.3
Q ss_pred CCcccceEEEeCCEEEEEEccCCCCCcceeEEEEECCCCce-Eeecc-CCCCCCCCCceEEEEE---CCEEEEEeCCCCC
Q 006645 244 TPCAGHSLIPWENKLLSIAGHTKDPSEIIQVKVFDLQTCSW-STLKT-YGKPPVSRGGQSVTLV---GTSLVIFGGEDAK 318 (637)
Q Consensus 244 ~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W-~~~~~-~g~~p~~r~~~~~~~~---~~~lyv~GG~~~~ 318 (637)
..-.|+++....+.+ ++|.-+.. .....++.|+.....| ..... .+.+.-...++++++. +...|++|--...
T Consensus 332 ~~q~GfSa~~t~d~~-~~GapG~~-~w~G~v~~~~~~~~~~~~~~~~~~~~~~~sylGySVa~~~~~g~~~~v~GAP~~~ 409 (1095)
T 3k6s_A 332 MAQEGFSAVFTPDGP-VLGAVGSF-TWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPRYQ 409 (1095)
T ss_dssp BCCTTSSEECCTTCC-EEEESCST-TTTBEEEECCSSSCCEEECCCSSCCCCCSCCBTSSEECCCCSSSCEEEEEETTGG
T ss_pred cccccccceecCCcc-eEcccccC-CccceeEEecCCCcceeeccccccccccccccceeeEEeccCCceEEEEEccccc
Confidence 344566666666655 78765433 3455677887655443 22211 1223333445665542 2345677643211
Q ss_pred CCCCCceEEEECCCCceEEec-CCCCCCCcccccEEEEEc---C--CEEEEEeCCCC--CCCcCcEEEEECCC--CeeEe
Q 006645 319 RSLLNDLHILDLETMTWDEID-AVGVPPSPRSDHAAAVHA---E--RYLLIFGGGSH--AACFNDLHVLDLQT--MEWSR 388 (637)
Q Consensus 319 ~~~~n~i~~yd~~t~~W~~~~-~~~~~p~~r~~h~~~~~~---~--~~l~v~GG~~~--~~~~~dl~~~d~~t--~~W~~ 388 (637)
....+++|......|.... ..|......+++++++.. | ..|+++|.-.. ......+++|.... ..|..
T Consensus 410 --~~G~V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~~ 487 (1095)
T 3k6s_A 410 --HTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWC 487 (1095)
T ss_dssp --GTCEEEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCCS
T ss_pred --ccceEEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCcceee
Confidence 2467999998878887754 234444556777777641 1 24777774221 12234688886543 45764
Q ss_pred cccC-CCC--CCCCcccEEEEECC
Q 006645 389 PTQQ-GEI--PTPRAGHAGVTIGE 409 (637)
Q Consensus 389 l~~~-~~~--p~~R~~hs~~~~~~ 409 (637)
.... +.. +..|++++.+.++|
T Consensus 488 ~~~l~g~~~~~~~~FG~sva~~gD 511 (1095)
T 3k6s_A 488 DAVLYGEQGHPWGRFGAALTVLGD 511 (1095)
T ss_dssp CSSCCCCCSCSSCCBTSCEEEEEC
T ss_pred eEEeecccCCccccCccceEeecc
Confidence 3221 221 45788999888755
No 405
>3ter_A Mammalian stromal interaction molecule-1; dimer, metal binding protein; 2.55A {Caenorhabditis elegans}
Probab=66.37 E-value=61 Score=27.62 Aligned_cols=16 Identities=13% Similarity=-0.043 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHHHH
Q 006645 592 LQKELELLQRQKAASE 607 (637)
Q Consensus 592 ~~~e~~~~~~~~~~~~ 607 (637)
..+.+++.+.++++.|
T Consensus 109 vt~~l~Er~~RW~qIE 124 (136)
T 3ter_A 109 IHTLTRETQERWLQIE 124 (136)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3344444444444433
No 406
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=66.35 E-value=39 Score=29.50 Aligned_cols=38 Identities=13% Similarity=0.048 Sum_probs=20.7
Q ss_pred HHHhHHHHHHHHhhhhhHHHHHHHHH---HHHHHHHHhhhH
Q 006645 515 LIATLKAEKEELESSLSKEKLQSIQL---KQDLTEAESQNT 552 (637)
Q Consensus 515 ~~~~l~~~~~~le~~~~e~~~~~~~l---~~~l~e~e~~~~ 552 (637)
.++.+.+..+.++..+.......++| +.++.+.+..+.
T Consensus 10 ~l~ql~~~~qql~~~~~~l~~~~~~L~~a~~~~~e~~~~l~ 50 (151)
T 2zdi_C 10 ELEKLAYEYQVLQAQAQILAQNLELLNLAKAEVQTVRETLE 50 (151)
T ss_dssp HHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555556666666666666655 555555444333
No 407
>1u2m_A Histone-like protein HLP-1; coiled coil, chaperone; 2.30A {Escherichia coli} SCOP: f.48.1.1 PDB: 1sg2_A
Probab=66.17 E-value=5.1 Score=34.94 Aligned_cols=23 Identities=22% Similarity=0.141 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHH
Q 006645 537 SIQLKQDLTEAESQNTDLYKELQ 559 (637)
Q Consensus 537 ~~~l~~~l~e~e~~~~~~~~elq 559 (637)
...++.+|+.++.+++.+.++++
T Consensus 32 ~~~~~~el~~~~~el~~~~~~lq 54 (143)
T 1u2m_A 32 FKGRASELQRMETDLQAKMKKLQ 54 (143)
T ss_dssp -----------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444444444444
No 408
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=65.66 E-value=24 Score=33.29 Aligned_cols=62 Identities=16% Similarity=0.265 Sum_probs=36.9
Q ss_pred CCEEEEEeCCCCCCCCCCceEEEECCCCceE-----EecCCCCCCC------cccccEEEEE-cCCEEEEEeCCCCCCCc
Q 006645 306 GTSLVIFGGEDAKRSLLNDLHILDLETMTWD-----EIDAVGVPPS------PRSDHAAAVH-AERYLLIFGGGSHAACF 373 (637)
Q Consensus 306 ~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~-----~~~~~~~~p~------~r~~h~~~~~-~~~~l~v~GG~~~~~~~ 373 (637)
++++|+|-| +..|+||..+.+-. .+. .+ .|. |..-.++... .++++|+|-|.
T Consensus 129 ~~k~yfFkG--------~~yw~~d~~~~~~~~gyPk~i~-~g-~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg~------ 192 (227)
T 3lp9_A 129 GKEVYLFKG--------DQYARIDYGSNSMVNKEIKSIS-SG-YPCFRNTIFESGADAAFASHKTNEVYFFKDD------ 192 (227)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEESSSSCEEHH-HH-CGGGTTSGGGGCCSEEEECSSTTEEEEEETT------
T ss_pred CCEEEEEEC--------CEEEEEeCCCccccCCCCeEHH-HC-CCCccccccCCCccEEEEcCCCceEEEEECC------
Confidence 579999987 35889997654321 111 01 121 1223344433 46789999883
Q ss_pred CcEEEEECCCC
Q 006645 374 NDLHVLDLQTM 384 (637)
Q Consensus 374 ~dl~~~d~~t~ 384 (637)
..|.||..+.
T Consensus 193 -~Ywr~d~~~~ 202 (227)
T 3lp9_A 193 -HYARVKVTPX 202 (227)
T ss_dssp -EEEEEECCSS
T ss_pred -EEEEEECCcc
Confidence 5799998765
No 409
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=65.44 E-value=54 Score=26.70 Aligned_cols=39 Identities=15% Similarity=0.155 Sum_probs=20.6
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 006645 527 ESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQL 565 (637)
Q Consensus 527 e~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql 565 (637)
+.++.+...++..|.+++.+.+...+.+++|-.-+-..|
T Consensus 10 ~~eL~~~~~ei~~L~~ei~eLk~~ve~lEkERDFYF~KL 48 (106)
T 4e61_A 10 QAELTKSQETIGSLNEEIEQYKGTVSTLEIEREFYFNKL 48 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444555566666666555555555555444444
No 410
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=65.34 E-value=21 Score=37.62 Aligned_cols=7 Identities=0% Similarity=-0.026 Sum_probs=2.6
Q ss_pred HHHHHHH
Q 006645 604 AASEQAA 610 (637)
Q Consensus 604 ~~~~~~~ 610 (637)
.+.+.++
T Consensus 93 ~~~~~~~ 99 (455)
T 2dq0_A 93 EELKKKI 99 (455)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 411
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=65.33 E-value=50 Score=35.13 Aligned_cols=7 Identities=29% Similarity=0.140 Sum_probs=2.6
Q ss_pred HHHHHHH
Q 006645 604 AASEQAA 610 (637)
Q Consensus 604 ~~~~~~~ 610 (637)
.+.++++
T Consensus 140 ~~~~~~l 146 (501)
T 1wle_A 140 AQLEEQF 146 (501)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 412
>3onj_A T-snare VTI1; helix, HABC, protein transport; 1.92A {Saccharomyces cerevisiae} PDB: 3onl_C
Probab=64.45 E-value=54 Score=26.29 Aligned_cols=25 Identities=20% Similarity=0.146 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHH
Q 006645 558 LQSVRGQLAAEQSRCFKLEVDVAEL 582 (637)
Q Consensus 558 lq~~~~ql~~~q~~~~~le~~~~el 582 (637)
+..+++.+.+.++-+.+.+-|++.+
T Consensus 36 i~~ie~~ldEA~ell~qMelE~~~~ 60 (97)
T 3onj_A 36 LKHVEQQQDELFDLLDQMDVEVNNS 60 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3444444444444444444444443
No 413
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=64.35 E-value=25 Score=27.19 Aligned_cols=47 Identities=11% Similarity=0.200 Sum_probs=22.8
Q ss_pred hhHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 006645 512 TEHLIATLKAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSV 561 (637)
Q Consensus 512 ~e~~~~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~ 561 (637)
.+.+.+.|=+ +++..|.+.-.++..|.++|..++.++..+++++++.
T Consensus 26 se~YWk~lAE---~RR~AL~eaL~EN~~Lh~~ie~l~eEi~~lk~en~eL 72 (83)
T 1uii_A 26 SSQYWKEVAE---KRRKALYEALKENEKLHKEIEQKDNEIARLKKENKEL 72 (83)
T ss_dssp HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455554432 2233344444555556666665555555444444444
No 414
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=64.31 E-value=77 Score=32.46 Aligned_cols=19 Identities=26% Similarity=0.447 Sum_probs=14.8
Q ss_pred cccEEEEEcCCEEEEEeCC
Q 006645 349 SDHAAAVHAERYLLIFGGG 367 (637)
Q Consensus 349 ~~h~~~~~~~~~l~v~GG~ 367 (637)
..|++++..++.||.+|-.
T Consensus 338 ~~hs~alt~~G~v~~wG~n 356 (406)
T 4d9s_A 338 WRHTLAVTERNNVFAWGRG 356 (406)
T ss_dssp SSEEEEEETTSCEEEEECC
T ss_pred CCeEEEEeCCCCEEEecCC
Confidence 4678888778889999853
No 415
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=64.04 E-value=97 Score=30.98 Aligned_cols=145 Identities=15% Similarity=0.085 Sum_probs=72.2
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe---CCEEEEEEccCCCCCcc
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW---ENKLLSIAGHTKDPSEI 271 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~---~~~lyv~GG~~~~~~~~ 271 (637)
.+.+||.+-... +.++++|+....-...... .+....+.+..-+++ ++.|++..+ ..
T Consensus 147 ~GnaYVt~s~~~----~~I~rV~pdG~~~~~~~~~----------~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g----- 206 (334)
T 2p9w_A 147 DGNSYVAFALGM----PAIARVSADGKTVSTFAWE----------SGNGGQRPGYSGITFDPHSNKLIAFGG-PR----- 206 (334)
T ss_dssp TSCEEEEEEESS----CEEEEECTTSCCEEEEEEC----------CCCSSSCCSCSEEEEETTTTEEEEESS-SS-----
T ss_pred CCCEEEeCCCCC----CeEEEEeCCCCEEeeeeec----------CCCcccccCcceEEEeCCCCEEEEEcC-CC-----
Confidence 478999754220 4699999986532211111 011233445544444 346666654 32
Q ss_pred eeEEEEECCCCceEeeccC--CCCCCCC--CceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCc
Q 006645 272 IQVKVFDLQTCSWSTLKTY--GKPPVSR--GGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSP 347 (637)
Q Consensus 272 ~~v~~yd~~t~~W~~~~~~--g~~p~~r--~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~ 347 (637)
.++.||+.+-....++.. |...... .+......+++++++.-. .+..+.+-...+ |.+....+..|.+
T Consensus 207 -~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~------~~~~~~l~S~Dg-W~sa~~~g~~~~~ 278 (334)
T 2p9w_A 207 -ALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGAR------APYAISFRSWDN-WKSANIKKTKRSE 278 (334)
T ss_dssp -SEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEE------TTEEEEEECSST-TSEEEEEEEECGG
T ss_pred -eEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcC------CCCEEEEECCCC-cceeEEeeeecCc
Confidence 588999875332122221 2111111 111122358887555432 233455544444 9887655544442
Q ss_pred --ccccEEEEE----cCCEEEEEeCC
Q 006645 348 --RSDHAAAVH----AERYLLIFGGG 367 (637)
Q Consensus 348 --r~~h~~~~~----~~~~l~v~GG~ 367 (637)
-.+.+.+.+ .+++||++.+.
T Consensus 279 ~~~~g~tt~t~~~~~~~~~iYvv~~~ 304 (334)
T 2p9w_A 279 LQNSGFTAVADYYQGSEQGLYAVSAF 304 (334)
T ss_dssp GGSSCEEEEEEEEETTEEEEEEEECC
T ss_pred cccCceeEEEEeccccCCeEEEEeee
Confidence 123344333 56789999864
No 416
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=63.78 E-value=50 Score=25.70 Aligned_cols=14 Identities=21% Similarity=0.043 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHHH
Q 006645 597 ELLQRQKAASEQAA 610 (637)
Q Consensus 597 ~~~~~~~~~~~~~~ 610 (637)
|.|..=|..++.++
T Consensus 57 q~LlnvK~~Ld~EI 70 (84)
T 1gk4_A 57 QDLLNVKMALDIEI 70 (84)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHH
Confidence 33434444444444
No 417
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A
Probab=63.61 E-value=3.7 Score=42.30 Aligned_cols=68 Identities=15% Similarity=0.140 Sum_probs=49.0
Q ss_pred CCCChHHHHHHhhhheeeeeCCCCCCCC----C---------CCC-----Hh--------hhHHHHHHhcCCCCCHHHHH
Q 006645 38 SKFSNDSALLLYALYQQATVGPCNVPKP----S---------SWS-----PV--------EQSKWKSWQGLGNMATTEAM 91 (637)
Q Consensus 38 ~~~~~~~~l~ly~l~kqa~~g~~~~~~p----~---------~~~-----~~--------~~~k~~aw~~~~~~s~~~a~ 91 (637)
...+.++.+.|-||--|+.+||++...+ . .-. +. .+.=...|+++.|||++|||
T Consensus 131 ~~~~~e~al~LAaL~~q~~~gD~~~~~~~~k~~~~~l~k~~~l~~flP~~~~~~~~~~~~~k~I~~~~k~~~g~s~~eAk 210 (375)
T 2al6_A 131 DQVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESI 210 (375)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTCGGGTSCHHHHHSSCHHHHHHHHHHHHHTTTTCCHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHhhhccchhhcccCCHHHhhhcccHHHhCCHHHHHHhChHHHHHHHHHHHHHhhCCCHHHHH
Confidence 4578999999999999999999863211 0 001 11 11113668899999999999
Q ss_pred HHHHHHHHHhCCCcc
Q 006645 92 RLFVKILEEEDPGWY 106 (637)
Q Consensus 92 ~~yv~~~~~~~~~~~ 106 (637)
.+|++++.+ .|.|.
T Consensus 211 ~~yL~~~~~-l~~yG 224 (375)
T 2al6_A 211 LKFFEILSP-VYRFD 224 (375)
T ss_dssp HHHHHHHTT-TCCCS
T ss_pred HHHHHHHhh-cccCC
Confidence 999999988 46553
No 418
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=63.39 E-value=1.1e+02 Score=29.58 Aligned_cols=101 Identities=14% Similarity=0.089 Sum_probs=52.3
Q ss_pred ceeEEEEECCCCce-EeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCC--C-CCceEEEECCCCceEEecCCCCCCC
Q 006645 271 IIQVKVFDLQTCSW-STLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRS--L-LNDLHILDLETMTWDEIDAVGVPPS 346 (637)
Q Consensus 271 ~~~v~~yd~~t~~W-~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~--~-~n~i~~yd~~t~~W~~~~~~~~~p~ 346 (637)
...++++|+.++.. ..+.. + .....+...+.+++.+..+.... . ...+|.+| +..+..+.. .
T Consensus 151 ~~~l~~~d~~~~~~~~~l~~----~---~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~-----~ 216 (347)
T 2gop_A 151 KTTFWIFDTESEEVIEEFEK----P---RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFE-----K 216 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEE----E---TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEE-----E
T ss_pred cceEEEEECCCCeEEeeecC----C---CcccccCCCCeEEEEEecccccccccccccEEEeC--CCceEEecc-----C
Confidence 46799999999887 55532 1 22233334444555554332211 2 45788888 677766642 1
Q ss_pred cccccEEEEEcCCEEEEEeCCCC--CCCcCcEEEEECCCCeeEec
Q 006645 347 PRSDHAAAVHAERYLLIFGGGSH--AACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 347 ~r~~h~~~~~~~~~l~v~GG~~~--~~~~~dl~~~d~~t~~W~~l 389 (637)
.......-.+.+|++.+.... ......|+++| +..+..+
T Consensus 217 --~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l 257 (347)
T 2gop_A 217 --VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGI 257 (347)
T ss_dssp --ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEES
T ss_pred --cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEec
Confidence 112222223344444443221 11245799999 6666655
No 419
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=63.33 E-value=90 Score=31.93 Aligned_cols=19 Identities=21% Similarity=0.226 Sum_probs=14.9
Q ss_pred cccEEEEEcCCEEEEEeCC
Q 006645 349 SDHAAAVHAERYLLIFGGG 367 (637)
Q Consensus 349 ~~h~~~~~~~~~l~v~GG~ 367 (637)
..|++++..++.||.+|-.
T Consensus 234 ~~ht~~l~~~G~v~~wG~n 252 (406)
T 4d9s_A 234 WRHTISVSYSGALYTYGWS 252 (406)
T ss_dssp SSEEEEEETTCCEEEEECC
T ss_pred CCcEEEEcCCCCEEEeeCC
Confidence 4678888778889999953
No 420
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=63.07 E-value=35 Score=26.38 Aligned_cols=47 Identities=13% Similarity=0.217 Sum_probs=24.0
Q ss_pred hhHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 006645 512 TEHLIATLKAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSV 561 (637)
Q Consensus 512 ~e~~~~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~ 561 (637)
.+++.+.|=+ +++..|.+.-+++.+|+++++.++.++..+.++.++.
T Consensus 18 se~YWk~lAE---~Rr~AL~eaL~EN~~Lh~~ie~~~eEi~~Lk~en~~L 64 (83)
T 1wlq_A 18 SSQYWKEVAE---QRRKALYEALKENEKLHKEIEQKDSEIARLRKENKDL 64 (83)
T ss_dssp TCTHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445554432 2333444555556667666666655555555444443
No 421
>3vem_A Helicase protein MOM1; coiled-coil, hendecad, transcriptional gene silencing, siRNA nucleus, chromatin, transcription; 3.20A {Arabidopsis thaliana}
Probab=62.85 E-value=63 Score=26.58 Aligned_cols=19 Identities=21% Similarity=0.139 Sum_probs=8.0
Q ss_pred hhhHHHHHHHHHHHHhHHH
Q 006645 573 FKLEVDVAELRQKLQTMET 591 (637)
Q Consensus 573 ~~le~~~~el~~~lq~~q~ 591 (637)
.+|++...+..++...++.
T Consensus 79 ~~lqe~ese~~~kkK~le~ 97 (115)
T 3vem_A 79 RKFHEVEAEHNTRTTKIEK 97 (115)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444443
No 422
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=62.84 E-value=1.5 Score=45.92 Aligned_cols=23 Identities=22% Similarity=0.189 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHH
Q 006645 540 LKQDLTEAESQNTDLYKELQSVR 562 (637)
Q Consensus 540 l~~~l~e~e~~~~~~~~elq~~~ 562 (637)
.++++.++|..+++.+++|+..+
T Consensus 342 f~~~v~~~~~~~~~~e~~l~~~~ 364 (418)
T 2qag_C 342 FEMKVKEKVQKLKDSEAELQRRH 364 (418)
T ss_dssp -----------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555554443
No 423
>3viq_A SWI5-dependent recombination DNA repair protein 1; recombination activator; 2.20A {Schizosaccharomyces pombe}
Probab=62.47 E-value=42 Score=28.26 Aligned_cols=16 Identities=25% Similarity=0.293 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHHHH
Q 006645 595 ELELLQRQKAASEQAA 610 (637)
Q Consensus 595 e~~~~~~~~~~~~~~~ 610 (637)
+++.|-..++..+|++
T Consensus 40 eL~~LI~KWr~asq~a 55 (122)
T 3viq_A 40 DLQTLIQKWKNAAQQA 55 (122)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3445555555555544
No 424
>1lrz_A FEMA, factor essential for expression of methicillin resistance; peptidoglycan, X-RAY crystallography, multiple anomalous dispersion; 2.10A {Staphylococcus aureus} SCOP: a.2.7.4 d.108.1.4 d.108.1.4
Probab=62.45 E-value=19 Score=37.50 Aligned_cols=75 Identities=16% Similarity=0.106 Sum_probs=34.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHh-hcC--------CC
Q 006645 549 SQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQTMETLQKELELLQRQKAASEQAALNAK-RQS--------SG 619 (637)
Q Consensus 549 ~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~~q~~~~e~~~~~~~~~~~~~~~~~~~-r~~--------~~ 619 (637)
++++++++++...+..++++-. ..+.+.++.++++|++..+++..++++++.. +-+ +-. +.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~-~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~g~~~~lAgal~~~~~~ 323 (426)
T 1lrz_A 254 EERDILNKDLNKALKDIEKRPE-NKKAHNKRDNLQQQLDANEQKIEEGKRLQEE---------HGNELPISAGFFFINPF 323 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HCSEEEEEEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHhhhCcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------cCCcceeEEEEEEEECC
Confidence 3333444444444444422221 2344555666666666555444444333211 000 111 44
Q ss_pred ceeeeccCCCCCCC
Q 006645 620 GMWGWLAGAPPTQN 633 (637)
Q Consensus 620 g~w~~~~~~~~~~~ 633 (637)
-.|+|.+|+-++-+
T Consensus 324 ~~~y~y~gs~~~~~ 337 (426)
T 1lrz_A 324 EVVYYAGGTSNAFR 337 (426)
T ss_dssp CEEEEEEEECGGGG
T ss_pred EEEEEecCchhhHh
Confidence 56888888766544
No 425
>3mtu_A Tropomyosin alpha-1 chain, microtubule-associated RP/EB family member 1; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Gallus gallus} PDB: 3mud_C*
Probab=62.22 E-value=25 Score=26.90 Aligned_cols=40 Identities=20% Similarity=0.120 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhh
Q 006645 534 KLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCF 573 (637)
Q Consensus 534 ~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~ 573 (637)
...++.|+.+..++..+...+++|-.-+-..|..-+..|+
T Consensus 8 KkkmqaLk~Ekdna~e~~e~lE~ERdFYf~KLRdiE~l~q 47 (75)
T 3mtu_A 8 KKKMQMLKLDKENALDRAEQAEADKDFYFGKLRNIELICQ 47 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 3344456666666666666666644444444433333343
No 426
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=62.17 E-value=1.6e+02 Score=30.94 Aligned_cols=105 Identities=9% Similarity=0.092 Sum_probs=54.8
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLET 332 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t 332 (637)
+++.++.|+.+. .+.+||.....-..+.. ......++.+ ++++++.|+.+ ..+.+||...
T Consensus 396 dg~~l~~~~~d~------~v~~~~~~~~~~~~~~~------~~~~v~~~~~s~d~~~l~~~~~d------~~v~~w~~~~ 457 (577)
T 2ymu_A 396 DGQTIASASDDK------TVKLWNRNGQLLQTLTG------HSSSVWGVAFSPDDQTIASASDD------KTVKLWNRNG 457 (577)
T ss_dssp TSSCEEEEETTS------EEEEECTTCCEEEEEEC------CSSCEEEEEECTTSSEEEEEETT------SEEEEEETTS
T ss_pred CCCEEEEEeCCC------EEEEEeCCCCEEEEecC------CCCCeEEEEECCCCCEEEEEcCC------CEEEEEECCC
Confidence 556667776543 47778754333222211 1111222233 45666776643 3578888766
Q ss_pred CceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeE
Q 006645 333 MTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWS 387 (637)
Q Consensus 333 ~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~ 387 (637)
..-..+... ...-.++++..++.+++.|+.+ ..+.+||.....-.
T Consensus 458 ~~~~~~~~~-----~~~v~~~~~spd~~~las~~~d-----~~i~iw~~~~~~~~ 502 (577)
T 2ymu_A 458 QLLQTLTGH-----SSSVRGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQ 502 (577)
T ss_dssp CEEEEEECC-----SSCEEEEEECTTSCEEEEEETT-----SEEEEEETTSCEEE
T ss_pred CEEEEEcCC-----CCCEEEEEEcCCCCEEEEEeCC-----CEEEEEcCCCCEEE
Confidence 554444321 1222344555566677777753 34778886554333
No 427
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=62.14 E-value=18 Score=26.31 Aligned_cols=10 Identities=10% Similarity=0.262 Sum_probs=3.7
Q ss_pred HHHHHHHHHH
Q 006645 539 QLKQDLTEAE 548 (637)
Q Consensus 539 ~l~~~l~e~e 548 (637)
.|+.++..++
T Consensus 26 ~Le~~~~~L~ 35 (61)
T 1t2k_D 26 SLEKKAEDLS 35 (61)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 428
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=61.96 E-value=1.4e+02 Score=30.12 Aligned_cols=140 Identities=8% Similarity=-0.046 Sum_probs=0.0
Q ss_pred eEEEECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCC
Q 006645 190 GAAVVQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPS 269 (637)
Q Consensus 190 a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~ 269 (637)
.....++.+|+... ...+++.|..+..-..+.+..............|.+...+++..-+++|||.........
T Consensus 219 ~~~~~~~~~~~~~~------~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~ 292 (373)
T 2mad_H 219 AQANKSGRIVWPVY------SGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWK 292 (373)
T ss_pred eeEecCCEEEEEcC------CceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCccc
Q ss_pred ---cceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE-CCE-EEEEeCCCCCCCCCCceEEEECCCCceEEe-cCCCC
Q 006645 270 ---EIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GTS-LVIFGGEDAKRSLLNDLHILDLETMTWDEI-DAVGV 343 (637)
Q Consensus 270 ---~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~-~~~~~ 343 (637)
..+.|+++|+.+++-..- .|.+...+.+... +++ +++.+.. ..+++.+||+.+.+-... ...|.
T Consensus 293 ~~~~~~~V~VID~~t~~vv~~-----i~~g~~p~~i~~s~Dg~~~l~v~~~-----~~~~V~ViD~~t~~vv~~i~~vG~ 362 (373)
T 2mad_H 293 LHAAAKEVTSVTGLVGQTSSQ-----ISLGHDVDAISVAQDGGPDLYALSA-----GTEVLHIYDAGAGDQDQSTVELGS 362 (373)
T ss_pred ccCCCCeEEEEECCCCEEEEE-----EECCCCcCeEEECCCCCeEEEEEcC-----CCCeEEEEECCCCCEEeeecCCCC
Q ss_pred CC
Q 006645 344 PP 345 (637)
Q Consensus 344 ~p 345 (637)
.|
T Consensus 363 ~P 364 (373)
T 2mad_H 363 GP 364 (373)
T ss_pred CC
No 429
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=61.80 E-value=7.8 Score=36.94 Aligned_cols=11 Identities=36% Similarity=0.274 Sum_probs=4.1
Q ss_pred hhhHHHHHHHH
Q 006645 573 FKLEVDVAELR 583 (637)
Q Consensus 573 ~~le~~~~el~ 583 (637)
.+|.+.+.+++
T Consensus 71 e~L~~~Lk~ar 81 (251)
T 3m9b_A 71 SKLMETLKEAR 81 (251)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 430
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=61.68 E-value=41 Score=27.14 Aligned_cols=30 Identities=17% Similarity=0.170 Sum_probs=16.6
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHhhh
Q 006645 522 EKEELESSLSKEKLQSIQLKQDLTEAESQN 551 (637)
Q Consensus 522 ~~~~le~~~~e~~~~~~~l~~~l~e~e~~~ 551 (637)
+...+.+++...+.+..+|.++++.+|-++
T Consensus 13 ~~~~lr~ei~~Le~E~~rLr~~~~~LE~~L 42 (100)
T 1go4_E 13 EADTLRLKVEELEGERSRLEEEKRMLEAQL 42 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555556666666666555555443
No 431
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=60.81 E-value=40 Score=34.73 Aligned_cols=11 Identities=9% Similarity=0.157 Sum_probs=4.6
Q ss_pred HHHHHHHHHHH
Q 006645 577 VDVAELRQKLQ 587 (637)
Q Consensus 577 ~~~~el~~~lq 587 (637)
.++++||..+.
T Consensus 105 ~~i~~l~~~~~ 115 (411)
T 3ghg_C 105 SSIRYLQEIYN 115 (411)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33444444433
No 432
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=60.75 E-value=58 Score=26.43 Aligned_cols=11 Identities=9% Similarity=0.151 Sum_probs=4.7
Q ss_pred HHHHHHHHHHh
Q 006645 604 AASEQAALNAK 614 (637)
Q Consensus 604 ~~~~~~~~~~~ 614 (637)
..+++.|.+.+
T Consensus 106 ~~L~~aL~~~Q 116 (118)
T 3uul_A 106 SRLHDALMELQ 116 (118)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 33444444444
No 433
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=60.53 E-value=79 Score=35.21 Aligned_cols=69 Identities=9% Similarity=-0.014 Sum_probs=35.0
Q ss_pred CcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccc-eEEEeCCEEEEEEccCCC---CCcceeEEEEECCCCceEe
Q 006645 211 SDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGH-SLIPWENKLLSIAGHTKD---PSEIIQVKVFDLQTCSWST 286 (637)
Q Consensus 211 ~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~h-s~v~~~~~lyv~GG~~~~---~~~~~~v~~yd~~t~~W~~ 286 (637)
..++.||+.+++-..+-... .......... -...-+++..+++..... .....++++||+.+++-..
T Consensus 36 ~~i~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~ 106 (740)
T 4a5s_A 36 NNILVFNAEYGNSSVFLENS---------TFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT 106 (740)
T ss_dssp TEEEEEETTTCCEEEEECTT---------TTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC
T ss_pred CcEEEEECCCCceEEEEech---------hhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE
Confidence 46899999998755442211 0000000010 111225544444443211 1334688999999998666
Q ss_pred ec
Q 006645 287 LK 288 (637)
Q Consensus 287 ~~ 288 (637)
+.
T Consensus 107 l~ 108 (740)
T 4a5s_A 107 EE 108 (740)
T ss_dssp SS
T ss_pred cc
Confidence 53
No 434
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=60.33 E-value=1.2e+02 Score=29.15 Aligned_cols=145 Identities=10% Similarity=0.093 Sum_probs=74.1
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~ 272 (637)
++.+++.|+.+ ..+.++|+.+++-...-.. ... ...++.+ ++.+++.|+.+.
T Consensus 76 dg~~l~s~s~D-----~~v~~wd~~~~~~~~~~~~-------------h~~--~v~~~~~~~~~~~l~s~s~D~------ 129 (319)
T 3frx_A 76 DGAYALSASWD-----KTLRLWDVATGETYQRFVG-------------HKS--DVMSVDIDKKASMIISGSRDK------ 129 (319)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEEC-------------CSS--CEEEEEECTTSCEEEEEETTS------
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCeeEEEcc-------------CCC--cEEEEEEcCCCCEEEEEeCCC------
Confidence 45566666633 3588899988764322110 011 1122222 567777777654
Q ss_pred eEEEEECCCCceEeeccCCCCCCCCCceEEEEE--------CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCC
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--------GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVP 344 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--------~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~ 344 (637)
.+.+||+....-..+.. .......+.+ ++.+++.||.+ ..+.+||+.+.+-...-..
T Consensus 130 ~i~vwd~~~~~~~~~~~------h~~~v~~~~~~~~~~~~~~~~~l~s~~~d------~~i~~wd~~~~~~~~~~~~--- 194 (319)
T 3frx_A 130 TIKVWTIKGQCLATLLG------HNDWVSQVRVVPNEKADDDSVTIISAGND------KMVKAWNLNQFQIEADFIG--- 194 (319)
T ss_dssp CEEEEETTSCEEEEECC------CSSCEEEEEECCC------CCEEEEEETT------SCEEEEETTTTEEEEEECC---
T ss_pred eEEEEECCCCeEEEEec------cCCcEEEEEEccCCCCCCCccEEEEEeCC------CEEEEEECCcchhheeecC---
Confidence 37788876543332211 0111111211 22356666653 3588899877654322110
Q ss_pred CCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCee
Q 006645 345 PSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEW 386 (637)
Q Consensus 345 p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W 386 (637)
....-.+++...++.+++.||.+ ..+.+||+.+..-
T Consensus 195 -h~~~v~~~~~sp~g~~l~s~~~d-----g~i~iwd~~~~~~ 230 (319)
T 3frx_A 195 -HNSNINTLTASPDGTLIASAGKD-----GEIMLWNLAAKKA 230 (319)
T ss_dssp -CCSCEEEEEECTTSSEEEEEETT-----CEEEEEETTTTEE
T ss_pred -CCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcE
Confidence 11112234444566677888754 3588899887653
No 435
>3plt_A Sphingolipid long chain base-responsive protein L; eisosomes, LSP1, PIL1, BAR domain, plasma membrane, SELF-ASS phosphoprotein; 2.90A {Saccharomyces cerevisiae}
Probab=60.33 E-value=1.1e+02 Score=28.66 Aligned_cols=6 Identities=17% Similarity=0.490 Sum_probs=2.2
Q ss_pred hhHHHH
Q 006645 574 KLEVDV 579 (637)
Q Consensus 574 ~le~~~ 579 (637)
.+..++
T Consensus 115 ~l~~~I 120 (234)
T 3plt_A 115 KITDEI 120 (234)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 436
>3ni0_A Bone marrow stromal antigen 2; coiled-coil, antiviral defense, immune system, GPI anchor; 1.60A {Mus musculus}
Probab=60.28 E-value=62 Score=25.59 Aligned_cols=19 Identities=16% Similarity=0.181 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 006645 596 LELLQRQKAASEQAALNAK 614 (637)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~ 614 (637)
+++++.++..+.|+|.++.
T Consensus 69 v~elqgEI~~Lnq~Lqda~ 87 (99)
T 3ni0_A 69 IKELENEVTKLNQELENLR 87 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444443
No 437
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=60.07 E-value=58 Score=33.96 Aligned_cols=7 Identities=14% Similarity=0.453 Sum_probs=3.0
Q ss_pred EEEEEeC
Q 006645 360 YLLIFGG 366 (637)
Q Consensus 360 ~l~v~GG 366 (637)
++++++|
T Consensus 195 kvavV~~ 201 (551)
T 2b5u_A 195 NISVVSG 201 (551)
T ss_dssp EEEEEES
T ss_pred EEEEEcc
Confidence 3444444
No 438
>1ykh_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.00A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=59.73 E-value=45 Score=28.49 Aligned_cols=26 Identities=19% Similarity=0.225 Sum_probs=14.2
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHH
Q 006645 523 KEELESSLSKEKLQSIQLKQDLTEAE 548 (637)
Q Consensus 523 ~~~le~~~~e~~~~~~~l~~~l~e~e 548 (637)
..++-..+-.+.+++..|...|-+.+
T Consensus 59 ~~ela~dli~k~kqIe~LIdsLP~~~ 84 (132)
T 1ykh_B 59 IDELSTDIILKTRQINKLIDSLPGVD 84 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 33444555555666666666555444
No 439
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=59.71 E-value=1.2e+02 Score=28.67 Aligned_cols=56 Identities=13% Similarity=-0.002 Sum_probs=29.9
Q ss_pred CceEEEECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCee
Q 006645 323 NDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEW 386 (637)
Q Consensus 323 n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W 386 (637)
..+.++|..+..-...... ............++.+++.+|... +.+.+||+.+..-
T Consensus 221 ~~i~lwd~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~sg~~d----~~i~iwd~~~~~~ 276 (318)
T 4ggc_A 221 RHIRIWNVCSGACLSAVDA----HSQVCSILWSPHYKELISGHGFAQ----NQLVIWKYPTMAK 276 (318)
T ss_dssp CEEEEEETTTCCEEEEEEC----SSCEEEEEEETTTTEEEEEECTTT----CCEEEEETTTCCE
T ss_pred CEEEEEecccccccccccc----eeeeeeeeecccccceEEEEEcCC----CEEEEEECCCCcE
Confidence 4578888877665444322 111111222223555666656432 3488999877653
No 440
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=59.62 E-value=51 Score=34.07 Aligned_cols=32 Identities=16% Similarity=0.087 Sum_probs=13.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 006645 530 LSKEKLQSIQLKQDLTEAESQNTDLYKELQSV 561 (637)
Q Consensus 530 ~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~ 561 (637)
|...+.++..+++.+..+++....+++.++..
T Consensus 311 L~~~~~~l~~~~~~~~~k~~~v~~~~~~~~~~ 342 (406)
T 4dyl_A 311 LTSVTDELAVATEMVFRRQEMVTQLQQELRNE 342 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333334444444444444444444444444
No 441
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=59.31 E-value=1.5e+02 Score=29.79 Aligned_cols=151 Identities=15% Similarity=0.125 Sum_probs=78.4
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEccCCCCCcce
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGHTKDPSEII 272 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~~~~~~~~~ 272 (637)
++.+++.|+.+ ..+.+||+.+.+-...-.. +.......++.+ ++.+++.|+.++
T Consensus 181 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~-------------~~h~~~v~~~~~s~~~~~l~s~~~dg------ 236 (437)
T 3gre_A 181 EKSLLVALTNL-----SRVIIFDIRTLERLQIIEN-------------SPRHGAVSSICIDEECCVLILGTTRG------ 236 (437)
T ss_dssp SCEEEEEEETT-----SEEEEEETTTCCEEEEEEC-------------CGGGCCEEEEEECTTSCEEEEEETTS------
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeEEEcc-------------CCCCCceEEEEECCCCCEEEEEcCCC------
Confidence 36677777643 3688999988654332111 101112233333 567777887754
Q ss_pred eEEEEECCCCceEeeccCCCCCCCCCceEEEEE------CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecC-C-CCC
Q 006645 273 QVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV------GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDA-V-GVP 344 (637)
Q Consensus 273 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~------~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~-~-~~~ 344 (637)
.+.+||+.+......-. .+. .....++.+ ++.+++.|+.+ +.|.+||+.+..-...-. . +..
T Consensus 237 ~i~iwd~~~~~~~~~~~---~~~-~~~v~~~~~~~~~s~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~ 306 (437)
T 3gre_A 237 IIDIWDIRFNVLIRSWS---FGD-HAPITHVEVCQFYGKNSVIVVGGSSK------TFLTIWNFVKGHCQYAFINSDEQP 306 (437)
T ss_dssp CEEEEETTTTEEEEEEB---CTT-CEEEEEEEECTTTCTTEEEEEEESTT------EEEEEEETTTTEEEEEEESSSSCC
T ss_pred eEEEEEcCCccEEEEEe---cCC-CCceEEEEeccccCCCccEEEEEcCC------CcEEEEEcCCCcEEEEEEcCCCCC
Confidence 48899998866543311 011 111111111 23566666543 358889988765322211 0 000
Q ss_pred ------C--------------CcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 345 ------P--------------SPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 345 ------p--------------~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
| ....-.+++.. ++.+++.||.+ ..|.+||+.+..
T Consensus 307 ~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d-----~~i~~wd~~~~~ 361 (437)
T 3gre_A 307 SMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEAT-----SSIVMFSLNELS 361 (437)
T ss_dssp CGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGG-----TEEEEEETTCGG
T ss_pred ccceecccccccccceecccccCCceEEEEEC-CceEEEecCCC-----CeEEEEECCCcc
Confidence 1 11112234444 66788888754 358888887654
No 442
>2c5k_T Syntaxin TLG1, T-snare affecting A late golgi compartment protein 1; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae} PDB: 2c5j_A 2c5i_T
Probab=59.29 E-value=28 Score=27.94 Aligned_cols=24 Identities=17% Similarity=0.260 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHH
Q 006645 538 IQLKQDLTEAESQNTDLYKELQSV 561 (637)
Q Consensus 538 ~~l~~~l~e~e~~~~~~~~elq~~ 561 (637)
+.++.-+++++..+.+|.+-+...
T Consensus 39 ~El~~~l~el~e~l~DL~~SI~i~ 62 (95)
T 2c5k_T 39 EEIQDILKDVEETIVDLDRSIIVM 62 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444555554544444443
No 443
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=59.19 E-value=1.2e+02 Score=28.44 Aligned_cols=156 Identities=9% Similarity=0.030 Sum_probs=85.1
Q ss_pred eeEEEE--CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEcc
Q 006645 189 HGAAVV--QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGH 264 (637)
Q Consensus 189 ~a~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~ 264 (637)
+++++. ++.||+.-.. .+.+.++|+....-..+... ...+. ..++.. +++||+....
T Consensus 82 ~~ia~d~~~~~lyv~d~~-----~~~I~~~~~~g~~~~~~~~~-------------~~~~P-~~i~vd~~~g~lyv~~~~ 142 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQ-----LDRIEVAKMDGTQRRVLFDT-------------GLVNP-RGIVTDPVRGNLYWTDWN 142 (267)
T ss_dssp EEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECS-------------SCSSE-EEEEEETTTTEEEEEECC
T ss_pred cEEEEEecCCeEEEEECC-----CCEEEEEEcCCCCEEEEEEC-------------CCCCc-cEEEEeeCCCEEEEEECC
Confidence 445554 5789987542 35688999876443333211 01111 222332 6899987532
Q ss_pred CCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCC
Q 006645 265 TKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVG 342 (637)
Q Consensus 265 ~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~ 342 (637)
. ..+.++++++....-..+... .. ..-..++.- ++.||+.-.. .+.|++||+.+..-..+...
T Consensus 143 ~----~~~~I~~~~~dg~~~~~~~~~-~~---~~P~gia~d~~~~~lyv~d~~------~~~I~~~~~~g~~~~~~~~~- 207 (267)
T 1npe_A 143 R----DNPKIETSHMDGTNRRILAQD-NL---GLPNGLTFDAFSSQLCWVDAG------THRAECLNPAQPGRRKVLEG- 207 (267)
T ss_dssp S----SSCEEEEEETTSCCCEEEECT-TC---SCEEEEEEETTTTEEEEEETT------TTEEEEEETTEEEEEEEEEC-
T ss_pred C----CCcEEEEEecCCCCcEEEEEC-CC---CCCcEEEEcCCCCEEEEEECC------CCEEEEEecCCCceEEEecC-
Confidence 1 135788888865433333221 11 112233333 4688887542 46799999976433333211
Q ss_pred CCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEe
Q 006645 343 VPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSR 388 (637)
Q Consensus 343 ~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~ 388 (637)
...| +++++. ++.||+....+ +.|+++|+.+.+-..
T Consensus 208 -~~~P---~gi~~d-~~~lyva~~~~-----~~v~~~d~~~g~~~~ 243 (267)
T 1npe_A 208 -LQYP---FAVTSY-GKNLYYTDWKT-----NSVIAMDLAISKEMD 243 (267)
T ss_dssp -CCSE---EEEEEE-TTEEEEEETTT-----TEEEEEETTTTEEEE
T ss_pred -CCCc---eEEEEe-CCEEEEEECCC-----CeEEEEeCCCCCceE
Confidence 1222 345554 67899875432 468999998876544
No 444
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=59.19 E-value=1.4e+02 Score=29.51 Aligned_cols=154 Identities=12% Similarity=0.121 Sum_probs=77.2
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCCCcceeE
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDPSEIIQV 274 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~~~~~~v 274 (637)
++++++.|+ .+.+.+++..++......... ............-++..++.++.+.. ....+
T Consensus 187 dg~~l~s~s------~~~~~~~~~~~~~~~~~~~~~-----------~~~~~v~~v~fspdg~~l~~~s~d~~--~~~~i 247 (365)
T 4h5i_A 187 DGKVVAYIT------GSSLEVISTVTGSCIARKTDF-----------DKNWSLSKINFIADDTVLIAASLKKG--KGIVL 247 (365)
T ss_dssp TSSEEEEEC------SSCEEEEETTTCCEEEEECCC-----------CTTEEEEEEEEEETTEEEEEEEESSS--CCEEE
T ss_pred CCceEEecc------ceeEEEEEeccCcceeeeecC-----------CCCCCEEEEEEcCCCCEEEEEecCCc--ceeEE
Confidence 455666554 235778887776654332211 01111111222337788888776543 22346
Q ss_pred EEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcccccE
Q 006645 275 KVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHA 352 (637)
Q Consensus 275 ~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~ 352 (637)
+.+|............ ..........++.+ ++++++.|+.+ +.|.+||+.+.+-......+ ....-.+
T Consensus 248 ~~~~~~~~~~~~~~~~-~~~~~~~~V~~~~~Spdg~~lasgs~D------~~V~iwd~~~~~~~~~~~~g---H~~~V~~ 317 (365)
T 4h5i_A 248 TKISIKSGNTSVLRSK-QVTNRFKGITSMDVDMKGELAVLASND------NSIALVKLKDLSMSKIFKQA---HSFAITE 317 (365)
T ss_dssp EEEEEETTEEEEEEEE-EEESSCSCEEEEEECTTSCEEEEEETT------SCEEEEETTTTEEEEEETTS---SSSCEEE
T ss_pred eecccccceecceeee-eecCCCCCeEeEEECCCCCceEEEcCC------CEEEEEECCCCcEEEEecCc---ccCCEEE
Confidence 6677666555433210 01111112223333 67888888764 45899999876533211110 1111123
Q ss_pred EEEEcCCEEEEEeCCCCCCCcCcEEEEECC
Q 006645 353 AAVHAERYLLIFGGGSHAACFNDLHVLDLQ 382 (637)
Q Consensus 353 ~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~ 382 (637)
++...++.+++.|+.+ +.|.++|+.
T Consensus 318 v~fSpdg~~laS~S~D-----~tvrvw~ip 342 (365)
T 4h5i_A 318 VTISPDSTYVASVSAA-----NTIHIIKLP 342 (365)
T ss_dssp EEECTTSCEEEEEETT-----SEEEEEECC
T ss_pred EEECCCCCEEEEEeCC-----CeEEEEEcC
Confidence 4444577788888764 346777764
No 445
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A
Probab=59.12 E-value=92 Score=31.72 Aligned_cols=89 Identities=12% Similarity=0.099 Sum_probs=0.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH-----------------------
Q 006645 528 SSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQ----------------------- 584 (637)
Q Consensus 528 ~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~----------------------- 584 (637)
..+++..++.+....+...+-.......+++|.++..+.+-.+-..-.+++.+.-.+
T Consensus 126 ~~l~e~~~~~~~~~~~~~~~~~~~~~~~~e~~~k~~a~~af~~~~~~f~~q~~~~e~~~~~~~~~~~~~~~~~e~~~~~~ 205 (373)
T 3hhm_B 126 KKLHEYNTQFQEKSREYDRLYEEYTRTSQEIQMKRTAIEAFNETIKIFEEQCQTQERYSKEYIEKFKREGNEKEIQRIMH 205 (373)
T ss_dssp C--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSHHHHHHH
T ss_pred HHHHHHHHHHHhcccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcChHHHHHHHH
Q ss_pred ---HHHh-HHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 006645 585 ---KLQT-METLQKELELLQRQKAASEQAALNAKRQ 616 (637)
Q Consensus 585 ---~lq~-~q~~~~e~~~~~~~~~~~~~~~~~~~r~ 616 (637)
.|++ ++++....++|++++.......++.+|+
T Consensus 206 n~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 241 (373)
T 3hhm_B 206 NYDKLKSRISEIIDSRRRLEEDLKKQAAEYREIDKR 241 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 446
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=58.80 E-value=1.2e+02 Score=28.39 Aligned_cols=155 Identities=8% Similarity=-0.023 Sum_probs=84.6
Q ss_pred eeEEEE--CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CCEEEEEEcc
Q 006645 189 HGAAVV--QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--ENKLLSIAGH 264 (637)
Q Consensus 189 ~a~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~~lyv~GG~ 264 (637)
++++.. ++.||+.-.. .+.+++||+.+..-..+... ... .-+.++.. +++||+.-..
T Consensus 39 ~gi~~d~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~-------------~~~-~p~~ia~d~~~~~lyv~d~~ 99 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDIS-----EPSIGRASLHGGEPTTIIRQ-------------DLG-SPEGIALDHLGRTIFWTDSQ 99 (267)
T ss_dssp EEEEEETTTTEEEEEETT-----TTEEEEEESSSCCCEEEECT-------------TCC-CEEEEEEETTTTEEEEEETT
T ss_pred EEEEEecCCCEEEEEECC-----CCEEEEEecCCCCcEEEEEC-------------CCC-CccEEEEEecCCeEEEEECC
Confidence 455554 5789987542 35799999987643332111 011 11233332 5799987643
Q ss_pred CCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCC
Q 006645 265 TKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVG 342 (637)
Q Consensus 265 ~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~ 342 (637)
.+.|.+|++....-..+...+ ...| ..+++. +++||+..... ..+.|++++++...-..+...+
T Consensus 100 ------~~~I~~~~~~g~~~~~~~~~~-~~~P---~~i~vd~~~g~lyv~~~~~----~~~~I~~~~~dg~~~~~~~~~~ 165 (267)
T 1npe_A 100 ------LDRIEVAKMDGTQRRVLFDTG-LVNP---RGIVTDPVRGNLYWTDWNR----DNPKIETSHMDGTNRRILAQDN 165 (267)
T ss_dssp ------TTEEEEEETTSCSCEEEECSS-CSSE---EEEEEETTTTEEEEEECCS----SSCEEEEEETTSCCCEEEECTT
T ss_pred ------CCEEEEEEcCCCCEEEEEECC-CCCc---cEEEEeeCCCEEEEEECCC----CCcEEEEEecCCCCcEEEEECC
Confidence 346889998754433332211 1111 233333 57899876321 1357899998765444432211
Q ss_pred CCCCcccccEEEEEc-CCEEEEEeCCCCCCCcCcEEEEECCCCe
Q 006645 343 VPPSPRSDHAAAVHA-ERYLLIFGGGSHAACFNDLHVLDLQTME 385 (637)
Q Consensus 343 ~~p~~r~~h~~~~~~-~~~l~v~GG~~~~~~~~dl~~~d~~t~~ 385 (637)
...-.++++.. ++.||+.-.. .+.|++||+....
T Consensus 166 ----~~~P~gia~d~~~~~lyv~d~~-----~~~I~~~~~~g~~ 200 (267)
T 1npe_A 166 ----LGLPNGLTFDAFSSQLCWVDAG-----THRAECLNPAQPG 200 (267)
T ss_dssp ----CSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTEEE
T ss_pred ----CCCCcEEEEcCCCCEEEEEECC-----CCEEEEEecCCCc
Confidence 11223445543 5688887643 2578999987643
No 447
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=58.69 E-value=62 Score=35.51 Aligned_cols=155 Identities=15% Similarity=0.149 Sum_probs=74.9
Q ss_pred eeEEEECCEEEEEcccCCCcccCcEEEEEccCC-eEEEeeecccccCCCCCCCCCCCCcccceEEE-eCCEEEEEEccCC
Q 006645 189 HGAAVVQDKMYIYGGNHNGRYLSDMHILDLRSW-AWSKIQAKAVAESTESPSPALLTPCAGHSLIP-WENKLLSIAGHTK 266 (637)
Q Consensus 189 ~a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~t~-~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~-~~~~lyv~GG~~~ 266 (637)
-+++.+.+.+|+|=| +.+|+++.... ......... .. +.+| .....+... .++++|+|-|.
T Consensus 447 DAit~~rg~~yfFKg-------~~yWr~~~~~~~~~~P~~Is~----~w---p~LP-~~IDAA~~~~~~~k~yFFkG~-- 509 (631)
T 1ck7_A 447 DGIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVAT----FW---PELP-EKIDAVYEAPQEEKAVFFAGN-- 509 (631)
T ss_dssp SEEEECSSSEEEECS-------SEEEEESCTTSCCEEEEEGGG----TC---TTSC-SSCSBCCEETTTTEEEEEETT--
T ss_pred ceeEecCCcEEEEcC-------CEEEEEcCCCCCCCCceeccc----cC---CCCC-ccceEEEEECCCCEEEEEecC--
Confidence 345566889999988 45777765542 222111110 00 1122 222222222 26789999774
Q ss_pred CCCcceeEEEEECCCC--ce-EeeccCCCCCCC--CCceEEEE--ECCEEEEEeCCCCCCCCCCceEEEECCCCceE---
Q 006645 267 DPSEIIQVKVFDLQTC--SW-STLKTYGKPPVS--RGGQSVTL--VGTSLVIFGGEDAKRSLLNDLHILDLETMTWD--- 336 (637)
Q Consensus 267 ~~~~~~~v~~yd~~t~--~W-~~~~~~g~~p~~--r~~~~~~~--~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~--- 336 (637)
..|+|+..+. .+ ..+...| .|.. +.. ++.. .++++|+|-| +..|+||..+.+-.
T Consensus 510 ------~yWry~~~~l~~GYPk~Is~~G-~P~~~~~ID-AAf~~~~~gktYFFkG--------~~ywryd~~~~~vd~gY 573 (631)
T 1ck7_A 510 ------EYWIYSASTLERGYPKPLTSLG-LPPDVQRVD-AAFNWSKNKKTYIFAG--------DKFWRYNEVKKKMDPGF 573 (631)
T ss_dssp ------EEEEEETTEECTTCCEEGGGGT-CCTTCCCCC-BCCCCTTTCEEEEEET--------TEEEEEETTTTEECTTC
T ss_pred ------EEEEECCCccccCCCccchhcC-CCCCCCcce-eEEEecCCCeEEEEEC--------CEEEEEcCCcccccCCC
Confidence 5788875321 01 1111112 1211 111 1222 2578999976 35889997654311
Q ss_pred --EecCCCCCCCcccccEEEEEc-CCEEEEEeCCCCCCCcCcEEEEECCCC
Q 006645 337 --EIDAVGVPPSPRSDHAAAVHA-ERYLLIFGGGSHAACFNDLHVLDLQTM 384 (637)
Q Consensus 337 --~~~~~~~~p~~r~~h~~~~~~-~~~l~v~GG~~~~~~~~dl~~~d~~t~ 384 (637)
.+.. .-+..|..-.++.... ++.+|+|-|. ..|.||..+.
T Consensus 574 Pk~i~~-~w~G~p~~iDAAf~~~~~g~~YFFkG~-------~Ywr~d~~~~ 616 (631)
T 1ck7_A 574 PKLIAD-AWNAIPDNLDAVVDLQGGGHSYFFKGA-------YYLKLENQSL 616 (631)
T ss_dssp CEETTT-SCSSCCTTCCEEECCTTSCBCEEEETT-------EEECCBTTBT
T ss_pred CcchHh-hcCCCCCCCcEeEEEcCCCeEEEEECC-------EEEEEeCccc
Confidence 1110 0011122223444332 4679999884 4677776543
No 448
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=58.42 E-value=62 Score=30.40 Aligned_cols=14 Identities=14% Similarity=0.330 Sum_probs=5.8
Q ss_pred HHHHHHHhhhHHHH
Q 006645 542 QDLTEAESQNTDLY 555 (637)
Q Consensus 542 ~~l~e~e~~~~~~~ 555 (637)
.+|.|+...+++|.
T Consensus 177 sEI~EID~KI~~L~ 190 (242)
T 3uux_B 177 SEIRDIEVEVENLR 190 (242)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34444444444333
No 449
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=58.41 E-value=70 Score=35.13 Aligned_cols=64 Identities=14% Similarity=0.027 Sum_probs=34.2
Q ss_pred ceEEEECCCCce-EEecCCCCCCC--cccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEec
Q 006645 324 DLHILDLETMTW-DEIDAVGVPPS--PRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 324 ~i~~yd~~t~~W-~~~~~~~~~p~--~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l 389 (637)
.++++|+.+..- ..+.... .+. ...........++.++++..... .....++++|+.+.....+
T Consensus 229 ~l~~~d~~~~~~~~~l~~~~-~~~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 229 SLHVIGLNGPTHDLEMMPPD-DPRMREYYITMVKWATSTKVAVTWLNRA-QNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EEEEEESSSSCCCEECCCCC-CGGGSSEEEEEEEESSSSEEEEEEEETT-SCEEEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCceeEEeeCCc-cCCCccceeEEEEEeCCCeEEEEEEcCC-CCeEEEEEEeCCCCcceEE
Confidence 788999988763 4443110 000 11222344445676665543221 2235688999888765543
No 450
>1fmh_A General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_A
Probab=57.33 E-value=20 Score=21.35 Aligned_cols=10 Identities=50% Similarity=0.896 Sum_probs=4.4
Q ss_pred hhhHHHHHHH
Q 006645 573 FKLEVDVAEL 582 (637)
Q Consensus 573 ~~le~~~~el 582 (637)
.+|++++++|
T Consensus 18 yqleqevaql 27 (33)
T 1fmh_A 18 YQLEQEVAQL 27 (33)
T ss_dssp HHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 3444444443
No 451
>1yke_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.30A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=57.20 E-value=44 Score=29.29 Aligned_cols=75 Identities=13% Similarity=0.224 Sum_probs=0.0
Q ss_pred HhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhHHHHHHHH
Q 006645 517 ATLKAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQTMETLQKEL 596 (637)
Q Consensus 517 ~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~~q~~~~e~ 596 (637)
........++-..+-.+.+++..|...|-+.+....+-.+.+++.+.++.+.. +++++.+.+.+.+.+++
T Consensus 53 ~~f~~~~~ela~dli~kakqIe~LIdsLPg~~~seeeQ~~ri~~Le~E~~~~~----------~el~~~v~eae~ll~~v 122 (151)
T 1yke_B 53 EEFSNTIDELSTDIILKTRQINKLIDSLPGVDVSAEEQLRKIDMLQKKLVEVE----------DEKIEAIKKKEKLLRHV 122 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSCHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHH
Q ss_pred HHHHH
Q 006645 597 ELLQR 601 (637)
Q Consensus 597 ~~~~~ 601 (637)
+.+.+
T Consensus 123 ~~~l~ 127 (151)
T 1yke_B 123 DSLIE 127 (151)
T ss_dssp HHHHH
T ss_pred HHHHH
No 452
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=57.12 E-value=67 Score=28.15 Aligned_cols=83 Identities=13% Similarity=0.065 Sum_probs=0.0
Q ss_pred CCCCchhHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q 006645 507 KHPETTEHLIATLKAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKL 586 (637)
Q Consensus 507 ~~~~~~e~~~~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~l 586 (637)
.++..-+++...+.+-...|.+.....+.++...++=++-++.-.+..+.++.+.+..+.+-+++..++..-..+|+..+
T Consensus 65 kDk~~~e~l~~~veeA~~~L~eYn~rL~~E~~dR~~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~~hi 144 (152)
T 4fla_A 65 TDKEAAERLSKTVDEACLLLAEYNGRLAAELEDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKSHI 144 (152)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q ss_pred HhH
Q 006645 587 QTM 589 (637)
Q Consensus 587 q~~ 589 (637)
+.+
T Consensus 145 ~sL 147 (152)
T 4fla_A 145 QSL 147 (152)
T ss_dssp HTC
T ss_pred hcC
No 453
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=57.09 E-value=21 Score=35.68 Aligned_cols=50 Identities=18% Similarity=0.117 Sum_probs=0.0
Q ss_pred HHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 006645 516 IATLKAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQL 565 (637)
Q Consensus 516 ~~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql 565 (637)
.+.|++++.+++..+...+.+++.|+.+|...+.+++++++++.+.+..+
T Consensus 7 ~~~~~~~~~~~e~~i~~~~~~i~~L~~~l~~~~~~i~~l~~~i~~l~~~~ 56 (323)
T 1lwu_C 7 VQKILEEVRILEQIGVSHDAQIQELSEMWRVNQQFVTRLQQQLVDIRQTC 56 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 454
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=56.93 E-value=1.6e+02 Score=29.27 Aligned_cols=212 Identities=12% Similarity=0.108 Sum_probs=0.0
Q ss_pred CCEEEEEccc----CCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCC------CCcccceEEEeCCEEEEEEcc
Q 006645 195 QDKMYIYGGN----HNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALL------TPCAGHSLIPWENKLLSIAGH 264 (637)
Q Consensus 195 ~~~lyv~GG~----~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p------~~r~~hs~v~~~~~lyv~GG~ 264 (637)
+..||+..-. ..+...+.+.+||+.+.+-...-+. + .....+.++.-+++..+++.+
T Consensus 61 g~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~-------------~~~~~~~g~~p~~i~~spdg~~l~v~n~ 127 (361)
T 2oiz_A 61 GKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISL-------------PPKRVQGLNYDGLFRQTTDGKFIVLQNA 127 (361)
T ss_dssp SSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEE-------------CTTBCCBCCCGGGEEECTTSSEEEEEEE
T ss_pred CCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEc-------------CccccccCCCcceEEECCCCCEEEEECC
Q ss_pred CCCCCcceeEEEEECCCCceEee-ccCCCC------CCCCCceEEEEECCEEEEEeCCCCCCCC----------------
Q 006645 265 TKDPSEIIQVKVFDLQTCSWSTL-KTYGKP------PVSRGGQSVTLVGTSLVIFGGEDAKRSL---------------- 321 (637)
Q Consensus 265 ~~~~~~~~~v~~yd~~t~~W~~~-~~~g~~------p~~r~~~~~~~~~~~lyv~GG~~~~~~~---------------- 321 (637)
...+.+.+||+.+++-... -+.+.+ |.....+.+..-++++.++.-.......
T Consensus 128 ----~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~ 203 (361)
T 2oiz_A 128 ----SPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI 203 (361)
T ss_dssp ----SSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB
T ss_pred ----CCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce
Q ss_pred ----------------CCceEEEECCCCceEEecCCCCCC---------CcccccEEEEEcCCEEEEEeC-----CCCCC
Q 006645 322 ----------------LNDLHILDLETMTWDEIDAVGVPP---------SPRSDHAAAVHAERYLLIFGG-----GSHAA 371 (637)
Q Consensus 322 ----------------~n~i~~yd~~t~~W~~~~~~~~~p---------~~r~~h~~~~~~~~~l~v~GG-----~~~~~ 371 (637)
.+.++++|+..+.-..+....... +....+.+..-.++++|+... .++..
T Consensus 204 ~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~ 283 (361)
T 2oiz_A 204 FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKF 283 (361)
T ss_dssp CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTC
T ss_pred EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccC
Q ss_pred CcCcEEEEECCCCeeEecccCCCCCCCCcccEEEEECCccccceeeeeeccCCCCEEEEEcCCCCCCcccEEEEeCCCC
Q 006645 372 CFNDLHVLDLQTMEWSRPTQQGEIPTPRAGHAGVTIGENWFLGLSLVVSSYSGEDVIVAFGGYNGRYNNEVHVLKPSHK 450 (637)
Q Consensus 372 ~~~dl~~~d~~t~~W~~l~~~~~~p~~R~~hs~~~~~~~~yiG~s~~~~~~~g~~~l~v~GG~~~~~~~~v~~~d~~~~ 450 (637)
..+.++++|+.+.+-.. ..+.+. .+++++-.+ +.+||+.++ +++.+||+.+.
T Consensus 284 ~~~~v~viD~~t~~~v~-----~i~~~~-p~~ia~spd---------------g~~l~v~n~------~~v~v~D~~t~ 335 (361)
T 2oiz_A 284 PAAEIWVMDTKTKQRVA-----RIPGRD-ALSMTIDQQ---------------RNLMLTLDG------GNVNVYDISQP 335 (361)
T ss_dssp CCSEEEEEETTTTEEEE-----EEECTT-CCEEEEETT---------------TTEEEEECS------SCEEEEECSSS
T ss_pred CCceEEEEECCCCcEEE-----EEecCC-eeEEEECCC---------------CCEEEEeCC------CeEEEEECCCC
No 455
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=56.79 E-value=1.4e+02 Score=28.73 Aligned_cols=171 Identities=13% Similarity=0.100 Sum_probs=0.0
Q ss_pred CCCcceeEEEECCEEEEE---cccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEE
Q 006645 184 KARYEHGAAVVQDKMYIY---GGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLS 260 (637)
Q Consensus 184 ~~R~~~a~~~~~~~lyv~---GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv 260 (637)
.++...... .|..|++. ...........++++|+.++.-..+ .........-+++.++
T Consensus 14 ~~~~~~~~~-dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l------------------~~~~~~~~SpDg~~la 74 (347)
T 2gop_A 14 FAYLSDPRT-KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI------------------ENATMPRISPDGKKIA 74 (347)
T ss_dssp SCEEEEEEE-ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE------------------ESCEEEEECTTSSEEE
T ss_pred eEEcccceE-CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc------------------ccCCCeEECCCCCEEE
Q ss_pred EEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCC-----------------CCCCC--
Q 006645 261 IAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGED-----------------AKRSL-- 321 (637)
Q Consensus 261 ~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~-----------------~~~~~-- 321 (637)
+...... .....++++|+.++....+.. .+. .......-+++.++|.... ....+
T Consensus 75 ~~~~~~~-~~~~~l~~~~~~~g~~~~l~~---~~~--~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 148 (347)
T 2gop_A 75 FMRANEE-KKVSEIWVADLETLSSKKILE---AKN--IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFD 148 (347)
T ss_dssp EEEEETT-TTEEEEEEEETTTTEEEEEEE---ESE--EEEEEECTTSSEEEEEEECCCC---------CCCC--------
T ss_pred EEEeccC-CCcceEEEEECCCCceEEEEc---CCC--ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCccccc
Q ss_pred --CCceEEEECCCCce-EEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCC----cCcEEEEECCCCeeEec
Q 006645 322 --LNDLHILDLETMTW-DEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAAC----FNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 322 --~n~i~~yd~~t~~W-~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~----~~dl~~~d~~t~~W~~l 389 (637)
...|+++|+.+... ..+. + + .....+...++ +++.+....... ...+|.+| +..+..+
T Consensus 149 ~~~~~l~~~d~~~~~~~~~l~-----~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l 213 (347)
T 2gop_A 149 GEKTTFWIFDTESEEVIEEFE-----K-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKM 213 (347)
T ss_dssp -CEEEEEEEETTTTEEEEEEE-----E-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEE
T ss_pred CccceEEEEECCCCeEEeeec-----C-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEe
No 456
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=56.61 E-value=83 Score=25.92 Aligned_cols=96 Identities=19% Similarity=0.147 Sum_probs=0.0
Q ss_pred hhHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhHHH
Q 006645 512 TEHLIATLKAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQTMET 591 (637)
Q Consensus 512 ~e~~~~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~~q~ 591 (637)
..++...+.+.+..++....+...++..|+.+|.........+...+++.+..-..-++..+-.-.-++.+..++.+.=+
T Consensus 12 ~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k~n~aiE 91 (111)
T 2v66_B 12 NQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIE 91 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHH
Q 006645 592 LQKELELLQRQKAASE 607 (637)
Q Consensus 592 ~~~e~~~~~~~~~~~~ 607 (637)
+..=++.-..++..+.
T Consensus 92 rnalLE~El~EKe~L~ 107 (111)
T 2v66_B 92 RNAFLESELDEKESLL 107 (111)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
No 457
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=55.97 E-value=1.5e+02 Score=28.67 Aligned_cols=102 Identities=22% Similarity=0.273 Sum_probs=0.0
Q ss_pred hhHHHHhHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHhhhH--------HHHHHHHHHHHHHHHHHhhh-hhhHHHHHH
Q 006645 512 TEHLIATLKAEKEELESSLSK-EKLQSIQLKQDLTEAESQNT--------DLYKELQSVRGQLAAEQSRC-FKLEVDVAE 581 (637)
Q Consensus 512 ~e~~~~~l~~~~~~le~~~~e-~~~~~~~l~~~l~e~e~~~~--------~~~~elq~~~~ql~~~q~~~-~~le~~~~e 581 (637)
.+++...+....++++..+.- .+.-..++.+.++++.+.+. .+.+.++.+..++...-... .+++..+.+
T Consensus 101 ~eelr~kl~~~veelk~~L~Py~eelr~k~~~~leeLr~~l~P~ae~~~~kl~~~~e~L~~ql~~~a~~L~~~l~~~~ee 180 (273)
T 3s84_A 101 ADELKAKIDQNVEELKGRLTPYADEFKVKIDQTVEELRRSLAPYAQDTQEKLNHQLEGLTFQMKKNAEELKARISASAEE 180 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHh------------HHHHHHHHHHHHHHHHHHHHHHHHH
Q 006645 582 LRQKLQT------------METLQKELELLQRQKAASEQAALNA 613 (637)
Q Consensus 582 l~~~lq~------------~q~~~~e~~~~~~~~~~~~~~~~~~ 613 (637)
|+++|.- ++++.+.++.+-.++++.-++++..
T Consensus 181 Lr~~L~p~ae~lr~~l~~~~e~l~~~l~~~~~~~~qq~e~f~~~ 224 (273)
T 3s84_A 181 LRQRLAPLAEDVRGNLRGNTEGLQKSLAELGGHLDQQVEEFRRR 224 (273)
T ss_dssp HHHHHHHHHHHHHHTSSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
No 458
>3azd_A Short alpha-tropomyosin, transcription factor GCN; coiled-coil, actin-binding protein, muscle protein; 0.98A {Rattus norvegicus} PDB: 1ihq_A 2k8x_A
Probab=55.58 E-value=5.8 Score=25.85 Aligned_cols=31 Identities=19% Similarity=0.281 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 006645 589 METLQKELELLQRQKAASEQAALNAKRQSSG 619 (637)
Q Consensus 589 ~q~~~~e~~~~~~~~~~~~~~~~~~~r~~~~ 619 (637)
++.+.++++.++.++...++++..++++++.
T Consensus 6 i~avKkKiq~lq~q~d~aee~~~~~~~~l~~ 36 (37)
T 3azd_A 6 LEAVRRKIRSLQEQNYHLENEVARLKKLVGE 36 (37)
T ss_dssp CHHHHHHHHHHHHHTTTTHHHHHHHHTTTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
No 459
>3cl3_D NF-kappa-B essential modulator; death effector domain, coiled-coil, coiled coil, cytoplasm, disease mutation, ectodermal dysplasia; 3.20A {Homo sapiens}
Probab=55.53 E-value=35 Score=28.63 Aligned_cols=102 Identities=15% Similarity=0.026 Sum_probs=0.0
Q ss_pred CCchhHHHHhHHHHHHHHhhhhhHHHH----HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Q 006645 509 PETTEHLIATLKAEKEELESSLSKEKL----QSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQ 584 (637)
Q Consensus 509 ~~~~e~~~~~l~~~~~~le~~~~e~~~----~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~ 584 (637)
+...++-...+.+....++.++.+..+ ++.+|.-+++.++..+....+...+-++.|++-|-.+.+|-++-.+.=+
T Consensus 25 k~~Leek~~~~e~~~~~~~~Elee~kqq~~~~~d~L~lQ~esmeaalkmEr~~~~eEKrkLAqLQ~AY~~LfqeYd~~lK 104 (130)
T 3cl3_D 25 CQALEGRARAASEQARQLESEREALQQQHSVQVDQLRMQGQSVEAALRMERQAASEEKRKLAQLQVAYHQLFQEYDNHIK 104 (130)
T ss_dssp --------------------------CTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006645 585 KLQTMETLQKELELLQRQKAASEQAALNAKR 615 (637)
Q Consensus 585 ~lq~~q~~~~e~~~~~~~~~~~~~~~~~~~r 615 (637)
-...--++-+.+ |+..+.++|++|++
T Consensus 105 ~~~~~~e~~~~~-----ql~dL~qqLq~aee 130 (130)
T 3cl3_D 105 SSVVGSERKRGM-----QLEDLKQQLQQAEE 130 (130)
T ss_dssp HHHCC--------------------------
T ss_pred HHHHhhhhhccc-----hHHHHHHHHHHhcC
No 460
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=55.52 E-value=34 Score=23.98 Aligned_cols=44 Identities=18% Similarity=0.220 Sum_probs=0.0
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHh
Q 006645 545 TEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQT 588 (637)
Q Consensus 545 ~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~ 588 (637)
...++++..+.+.--+.-.++++-+..|.+.|+|+..|.+-|++
T Consensus 7 tRse~q~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~~LLkq 50 (58)
T 3a2a_A 7 TRSERQLLRLKQMNVQLAAKIQHLEFSCSEKEQEIERLNKLLRQ 50 (58)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 461
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=55.39 E-value=74 Score=33.70 Aligned_cols=101 Identities=10% Similarity=0.054 Sum_probs=0.0
Q ss_pred CCchhHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHH-------HHHHHHHHHHHHHHHhhhhhhHHHHHH
Q 006645 509 PETTEHLIATLKAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDL-------YKELQSVRGQLAAEQSRCFKLEVDVAE 581 (637)
Q Consensus 509 ~~~~e~~~~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~-------~~elq~~~~ql~~~q~~~~~le~~~~e 581 (637)
++..+..+..++.........+.+....+.+..++.+.++.+.+.. .++++..+..++..+..+.+.+++-..
T Consensus 131 rK~~~~~~~k~qk~l~~~~~~l~KaKk~Y~~~cke~e~a~~~~~~a~~d~~~t~k~~eK~~~k~~k~~~~~~~a~~~Y~~ 210 (486)
T 3haj_A 131 TKEAEDGFRKAQKPWAKKLKEVEAAKKAHHAACKEEKLAISREANSKADPSLNPEQLKKLQDKIEKCKQDVLKTKEKYEK 210 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHhHH-HHHHHHHHHHHHHHHHHHH
Q 006645 582 LRQKLQTME-TLQKELELLQRQKAASEQA 609 (637)
Q Consensus 582 l~~~lq~~q-~~~~e~~~~~~~~~~~~~~ 609 (637)
.-+.++..+ ..++++....++.+.+|++
T Consensus 211 ~v~~~n~~~~~y~~~~~~~~~~lQ~lEee 239 (486)
T 3haj_A 211 SLKELDQGTPQYMENMEQVFEQCQQFEEK 239 (486)
T ss_dssp HHHHHHTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 462
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=55.38 E-value=48 Score=34.46 Aligned_cols=94 Identities=17% Similarity=0.155 Sum_probs=0.0
Q ss_pred HHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhHHHHHHH
Q 006645 516 IATLKAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQTMETLQKE 595 (637)
Q Consensus 516 ~~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~~q~~~~e 595 (637)
+..+.+..+.+.+.++....... -.++-++..+..+++.+++..+.+..+-.+..-+ ..-.+..+-++++.++.++
T Consensus 4 ~~~~r~~~~~~~~~~~~r~~~~~--~~~~~~~~~~~r~~~~~~~~l~~~~n~~sk~i~~--~~~~~~~~l~~~~~~~~~~ 79 (421)
T 1ses_A 4 LKRLRQEPEVFHRAIREKGVALD--LEALLALDREVQELKKRLQEVQTERNQVAKRVPK--APPEEKEALIARGKALGEE 79 (421)
T ss_dssp HHHHHHCHHHHHHHHHHHTCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS--SCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHhCCCcC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hccccHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 006645 596 LELLQRQKAASEQAALNA 613 (637)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~ 613 (637)
+..+..++.+.+.++.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~ 97 (421)
T 1ses_A 80 AKRLEEALREKEARLEAL 97 (421)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
No 463
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=55.03 E-value=58 Score=28.99 Aligned_cols=93 Identities=24% Similarity=0.293 Sum_probs=0.0
Q ss_pred hhHHHHhHHHHHHHHhhhhhHHHHHHH----HHHHHHHHHHhhhH-HHHHHHHHHHHHHHHHHhhh-hhhHHHHHHHHHH
Q 006645 512 TEHLIATLKAEKEELESSLSKEKLQSI----QLKQDLTEAESQNT-DLYKELQSVRGQLAAEQSRC-FKLEVDVAELRQK 585 (637)
Q Consensus 512 ~e~~~~~l~~~~~~le~~~~e~~~~~~----~l~~~l~e~e~~~~-~~~~elq~~~~ql~~~q~~~-~~le~~~~el~~~ 585 (637)
..++-..|.....++...+...+..+. .+..++.+..+.++ ++.+.+.+++.+|..-.... .+++.-+.+++++
T Consensus 57 ~qel~~~l~~~ld~l~~~~~~l~~~L~P~t~el~~~l~~~~e~Lr~~L~~d~EelR~~l~p~~~el~~~l~~~~EelR~k 136 (165)
T 1gs9_A 57 TQELRALMDETMKELKAYKSELEEQLTPVAEETRARLSKELQAAQARLGADMEDVRGRLVQYRGEVQAMLGQSTEELRVR 136 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHh-----HHHHHHHHHHHHHHHH
Q 006645 586 LQT-----METLQKELELLQRQKA 604 (637)
Q Consensus 586 lq~-----~q~~~~e~~~~~~~~~ 604 (637)
|.- ...+.+.+++++.++.
T Consensus 137 l~P~~eeL~~~~~~~~eeLr~kL~ 160 (165)
T 1gs9_A 137 LASHLRKLRKRLLRDADDLQKRLA 160 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhh
No 464
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=54.65 E-value=1.5e+02 Score=28.41 Aligned_cols=187 Identities=13% Similarity=0.032 Sum_probs=0.0
Q ss_pred eeEEEE-CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCC
Q 006645 189 HGAAVV-QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKD 267 (637)
Q Consensus 189 ~a~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~ 267 (637)
++++.. +++|||.....+. ..+++||+.+++...+... +..+.....+...+...++......
T Consensus 75 ~gia~~~dG~l~vad~~~~~---~~v~~~d~~~g~~~~~~~~-------------~~~~~~~g~~~~~~~~~~v~d~~~g 138 (306)
T 2p4o_A 75 SGLAFTSNGDLVATGWNADS---IPVVSLVKSDGTVETLLTL-------------PDAIFLNGITPLSDTQYLTADSYRG 138 (306)
T ss_dssp EEEEECTTSCEEEEEECTTS---CEEEEEECTTSCEEEEEEC-------------TTCSCEEEEEESSSSEEEEEETTTT
T ss_pred eeEEEcCCCcEEEEeccCCc---ceEEEEcCCCCeEEEEEeC-------------CCccccCcccccCCCcEEEEECCCC
Q ss_pred CCcceeEEEEECCCCceEee---------ccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCC-CceEE
Q 006645 268 PSEIIQVKVFDLQTCSWSTL---------KTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLET-MTWDE 337 (637)
Q Consensus 268 ~~~~~~v~~yd~~t~~W~~~---------~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t-~~W~~ 337 (637)
.++++|+.+..-... ...+..+.+..- ..-++.||+.--. .+.|++|++.. .+...
T Consensus 139 -----~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi---s~dg~~lyv~d~~------~~~I~~~~~~~~g~~~~ 204 (306)
T 2p4o_A 139 -----AIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL---KRFGNFLYVSNTE------KMLLLRIPVDSTDKPGE 204 (306)
T ss_dssp -----EEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE---EEETTEEEEEETT------TTEEEEEEBCTTSCBCC
T ss_pred -----eEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc---CcCCCEEEEEeCC------CCEEEEEEeCCCCCCCc
Q ss_pred ecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecccCCCCCCCCcccEEEEEC---Cccccc
Q 006645 338 IDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPTQQGEIPTPRAGHAGVTIG---ENWFLG 414 (637)
Q Consensus 338 ~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~~~~~~p~~R~~hs~~~~~---~~~yiG 414 (637)
.... .....-..+++..++.|||.-..+ +.|.+||+. .....+. ..+.+-..-.++.++ ..
T Consensus 205 ~~~~---~~~~~P~gi~vd~dG~l~va~~~~-----~~V~~~~~~-G~~~~~~---~~~~~~~~p~~~a~~g~~~d---- 268 (306)
T 2p4o_A 205 PEIF---VEQTNIDDFAFDVEGNLYGATHIY-----NSVVRIAPD-RSTTIIA---QAEQGVIGSTAVAFGQTEGD---- 268 (306)
T ss_dssp CEEE---EESCCCSSEEEBTTCCEEEECBTT-----CCEEEECTT-CCEEEEE---CGGGTCTTEEEEEECCSTTT----
T ss_pred cEEE---eccCCCCCeEECCCCCEEEEeCCC-----CeEEEECCC-CCEEEEe---ecccccCCceEEEEecccCC----
Q ss_pred eeeeeeccCCCCEEEEE
Q 006645 415 LSLVVSSYSGEDVIVAF 431 (637)
Q Consensus 415 ~s~~~~~~~g~~~l~v~ 431 (637)
.+.|||.
T Consensus 269 ----------~~~LyVt 275 (306)
T 2p4o_A 269 ----------CTAIYVV 275 (306)
T ss_dssp ----------TTEEEEE
T ss_pred ----------CCEEEEE
No 465
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=54.59 E-value=1.8e+02 Score=29.19 Aligned_cols=206 Identities=10% Similarity=-0.019 Sum_probs=0.0
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccC--CeEEEeeecccccCCCCCCCCCCCCcccceEEEe---CCEEEEEEccCCCCC
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRS--WAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW---ENKLLSIAGHTKDPS 269 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t--~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~---~~~lyv~GG~~~~~~ 269 (637)
.+.|||-.- .-+++|+... .+|..+.+. +....-++++.. .+.||+.+......
T Consensus 22 ~g~l~vgt~-------~Gl~~~~~~~~g~~W~~~~~~-------------~~~~~v~~i~~dp~~~~~l~~g~~~g~~g- 80 (394)
T 3b7f_A 22 PVMLLVATI-------KGAWFLASDPARRTWELRGPV-------------FLGHTIHHIVQDPREPERMLMAARTGHLG- 80 (394)
T ss_dssp CCEEEEEET-------TEEEEEEECTTSCSEEEEEEE-------------STTSEEEEEEECSSSTTCEEEEEEC--CC-
T ss_pred CCEEEEEec-------CceEEEECCCCCCCceECCcc-------------CCCCceEEEEECCCCCCeEEEEecCCCCC-
Q ss_pred cceeEEEEECCCCceEeeccCCCCCCCC---------CceEEEEE----CCEEEEEeCCCCCCCCCCceEEEECCCCceE
Q 006645 270 EIIQVKVFDLQTCSWSTLKTYGKPPVSR---------GGQSVTLV----GTSLVIFGGEDAKRSLLNDLHILDLETMTWD 336 (637)
Q Consensus 270 ~~~~v~~yd~~t~~W~~~~~~g~~p~~r---------~~~~~~~~----~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~ 336 (637)
..|++.+-...+|..+......+... .-.+++.. .+.||+.+. ...|++.+-...+|+
T Consensus 81 --~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~-------~ggl~~S~DgG~tW~ 151 (394)
T 3b7f_A 81 --PTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS-------PQGLFRSTDHGASWE 151 (394)
T ss_dssp --EEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE-------TTEEEEESSTTSBCE
T ss_pred --ccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec-------CCcEEEEcCCCCCeE
Q ss_pred EecCCCCCCC--------------cccccEEEEE--cCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecccCCCCCC---
Q 006645 337 EIDAVGVPPS--------------PRSDHAAAVH--AERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPTQQGEIPT--- 397 (637)
Q Consensus 337 ~~~~~~~~p~--------------~r~~h~~~~~--~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~~~~~~p~--- 397 (637)
.+......|. ....+++++. ..+.|||..+. ..+++.+-...+|+.+........
T Consensus 152 ~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~------ggl~~s~DgG~tW~~~~~~~~~~~~p~ 225 (394)
T 3b7f_A 152 PVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS------GGVFESTDAGTDWKPLNRGCAANFLPD 225 (394)
T ss_dssp ECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET------BEEEEESSTTSSCEECCTTCCCTTSSS
T ss_pred ECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC------CCEEEECCCCCCceECCCCccccccCC
Q ss_pred -----CCcccEEEEECCccccceeeeeeccCCCCEEEEEcCCCCCCcccEEEEeCCCCcccccc
Q 006645 398 -----PRAGHAGVTIGENWFLGLSLVVSSYSGEDVIVAFGGYNGRYNNEVHVLKPSHKSTLSSK 456 (637)
Q Consensus 398 -----~R~~hs~~~~~~~~yiG~s~~~~~~~g~~~l~v~GG~~~~~~~~v~~~d~~~~~~~~~~ 456 (637)
....++++.... .+..+.+|...+ +++.+-....|....
T Consensus 226 ~~~~~g~~~~~i~~~~~---------------~~~~l~vg~~~g-----l~~s~D~G~tW~~~~ 269 (394)
T 3b7f_A 226 PNVEFGHDPHCVVQHPA---------------APDILYQQNHCG-----IYRMDRREGVWKRIG 269 (394)
T ss_dssp SSSSSCBCEEEEEECSS---------------STTEEEEEETTE-----EEEEETTTTEEECGG
T ss_pred CccccCcceeEEEECCC---------------CCCEEEEEcCCe-----EEEeCCCCCcceECC
No 466
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=54.05 E-value=35 Score=25.00 Aligned_cols=41 Identities=10% Similarity=0.134 Sum_probs=0.0
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 006645 520 KAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQS 560 (637)
Q Consensus 520 ~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~ 560 (637)
++...+|+.+....+.++..|+.++..++.++..+...|..
T Consensus 22 k~~~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk~~l~~ 62 (63)
T 2wt7_A 22 RELTDTLQAETDQLEDEKSALQTEIANLLKEKEKLEFILAA 62 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 467
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=53.97 E-value=25 Score=37.24 Aligned_cols=67 Identities=16% Similarity=0.174 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 006645 550 QNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQTMETLQKELELLQRQKAASEQAALNAKRQ 616 (637)
Q Consensus 550 ~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~~q~~~~e~~~~~~~~~~~~~~~~~~~r~ 616 (637)
++.++.++.++.+.++++.+.+--.+.+++.++.+.-++.+++..+..++..++.+++.++.+.+.+
T Consensus 34 ~~~~ld~~~r~~~~~~~~l~~~rn~~sk~i~~~k~~~~~~~~l~~~~~~l~~~i~~le~~~~~~~~~ 100 (485)
T 3qne_A 34 EIIAEYKEWVKLRFDLDEHNKKLNSVQKEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKEAEADKN 100 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 468
>1y4c_A Maltose binding protein fused with designed helical protein; de novo designed helical protein, maltose binding protein fusion, de novo protein; HET: GLC; 1.90A {Escherichia coli}
Probab=53.82 E-value=1.2e+02 Score=32.16 Aligned_cols=95 Identities=21% Similarity=0.240 Sum_probs=0.0
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhh-------hhhHHHHHHHHHHHHhHHHH
Q 006645 520 KAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRC-------FKLEVDVAELRQKLQTMETL 592 (637)
Q Consensus 520 ~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~-------~~le~~~~el~~~lq~~q~~ 592 (637)
+...+-|.-.+++.+..+++-+ +|..+---.+++.+-|....+.|...|+-. .-|.+-+++.||-|.+.|+|
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (494)
T 1y4c_A 386 RSSEELLKIALQEAQKTLQQAQ-ELAKKGGGEEQLKRALKRADRNLWAAQELAKKGGGGEELLKQALQQAQQLLRQAQEL 464 (494)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHHHSSCCHHHHHHHHHHHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHH-HHHHccCcHHHHHHHHHhhhhhhHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHH---HHHHHHHHHHHHHHHHHHhh
Q 006645 593 QKE---LELLQRQKAASEQAALNAKR 615 (637)
Q Consensus 593 ~~e---~~~~~~~~~~~~~~~~~~~r 615 (637)
-++ .+.+.+.+++-+|-|+++++
T Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (494)
T 1y4c_A 465 AKKGGGEELLKQALQQAQQLLQQAQE 490 (494)
T ss_dssp HHHCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHccChHHHHHHHHHHHHHHHHHHHH
No 469
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=53.65 E-value=42 Score=30.55 Aligned_cols=70 Identities=13% Similarity=0.131 Sum_probs=0.0
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhHHHHH
Q 006645 524 EELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQTMETLQ 593 (637)
Q Consensus 524 ~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~~q~~~ 593 (637)
++++..|.+.-.++..|.++|..++.++..+.+++++.+.-....|--..-+++-.-+-...++.+..+.
T Consensus 104 E~RR~AL~eaLeEN~~Lh~~ie~l~eEi~~LkeEn~eLkeLae~~q~la~vi~~l~~~~~~~~e~~~~~~ 173 (209)
T 2wvr_A 104 EKRRKALYEALKENEKLHKEIEQKDNEIARLKKENKELAEVAEHVQYMAELIERLNGEPLDNFESLDNQE 173 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCchhhh
No 470
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=53.57 E-value=91 Score=31.90 Aligned_cols=126 Identities=14% Similarity=0.047 Sum_probs=0.0
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCc------eEeecc----CCCCCCCCCceEEEEECCEEEEE---eCCCCCCCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCS------WSTLKT----YGKPPVSRGGQSVTLVGTSLVIF---GGEDAKRSL 321 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~------W~~~~~----~g~~p~~r~~~~~~~~~~~lyv~---GG~~~~~~~ 321 (637)
++++++. .....++++|..+.. |..... .|-.|......+...-++++|+. ++.......
T Consensus 237 dG~~~~v-------s~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~ 309 (386)
T 3sjl_D 237 AGRLVWP-------TYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTA 309 (386)
T ss_dssp TTEEEEE-------BTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSC
T ss_pred CCcEEEE-------eCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCC
Q ss_pred CCceEEEECCCCceEEecCCCCCCCcccccEEEEEcCCE--EEEEeCCCCCCCcCcEEEEECCCCeeEecccCCCCCC
Q 006645 322 LNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERY--LLIFGGGSHAACFNDLHVLDLQTMEWSRPTQQGEIPT 397 (637)
Q Consensus 322 ~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~--l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~~~~~~p~ 397 (637)
.+.|+++|+.|.+-..-- +.+..-+++.+..+++ ||+..+.+ +++.+||..+.+-..--..+..|.
T Consensus 310 ~~~V~viD~~t~kv~~~i-----~vg~~~~~lavs~D~~~~ly~tn~~~-----~~VsViD~~t~k~~~~i~~~~~p~ 377 (386)
T 3sjl_D 310 SRFVVVLDAKTGERLAKF-----EMGHEIDSINVSQDEKPLLYALSTGD-----KTLYIHDAESGEELRSVNQLGHGP 377 (386)
T ss_dssp EEEEEEEETTTCCEEEEE-----EEEEEECEEEECSSSSCEEEEEETTT-----TEEEEEETTTCCEEEEECCCCSSC
T ss_pred CCEEEEEECCCCeEEEEE-----ECCCCcceEEECCCCCeEEEEEcCCC-----CeEEEEECCCCcEEEEecCCCCCc
No 471
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=53.43 E-value=1.6e+02 Score=28.31 Aligned_cols=145 Identities=12% Similarity=0.156 Sum_probs=0.0
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLET 332 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t 332 (637)
++.+++.|+.+.. +.+||+.+++-... .........++.+ ++.+++.|+.++. +.+||+..
T Consensus 76 dg~~l~s~s~D~~------v~~wd~~~~~~~~~-----~~~h~~~v~~~~~~~~~~~l~s~s~D~~------i~vwd~~~ 138 (319)
T 3frx_A 76 DGAYALSASWDKT------LRLWDVATGETYQR-----FVGHKSDVMSVDIDKKASMIISGSRDKT------IKVWTIKG 138 (319)
T ss_dssp TSSEEEEEETTSE------EEEEETTTTEEEEE-----EECCSSCEEEEEECTTSCEEEEEETTSC------EEEEETTS
T ss_pred CCCEEEEEeCCCE------EEEEECCCCCeeEE-----EccCCCcEEEEEEcCCCCEEEEEeCCCe------EEEEECCC
Q ss_pred CceEEecCCCCCCCcccccEEEEEcCCE------EEEEeCCCCCCCcCcEEEEECCCCeeEecccCCCCCCCCcccEEEE
Q 006645 333 MTWDEIDAVGVPPSPRSDHAAAVHAERY------LLIFGGGSHAACFNDLHVLDLQTMEWSRPTQQGEIPTPRAGHAGVT 406 (637)
Q Consensus 333 ~~W~~~~~~~~~p~~r~~h~~~~~~~~~------l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~~~~~~p~~R~~hs~~~ 406 (637)
..-..+. .....-.++....... +++.||.+ ..+.+||+.+..-.. ........-.++.
T Consensus 139 ~~~~~~~-----~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~-----~~~~h~~~v~~~~ 203 (319)
T 3frx_A 139 QCLATLL-----GHNDWVSQVRVVPNEKADDDSVTIISAGND-----KMVKAWNLNQFQIEA-----DFIGHNSNINTLT 203 (319)
T ss_dssp CEEEEEC-----CCSSCEEEEEECCC------CCEEEEEETT-----SCEEEEETTTTEEEE-----EECCCCSCEEEEE
T ss_pred CeEEEEe-----ccCCcEEEEEEccCCCCCCCccEEEEEeCC-----CEEEEEECCcchhhe-----eecCCCCcEEEEE
Q ss_pred ECCccccceeeeeeccCCCCEEEEEcCCCCCCcccEEEEeCCCC
Q 006645 407 IGENWFLGLSLVVSSYSGEDVIVAFGGYNGRYNNEVHVLKPSHK 450 (637)
Q Consensus 407 ~~~~~yiG~s~~~~~~~g~~~l~v~GG~~~~~~~~v~~~d~~~~ 450 (637)
+.. .+.+++.||.++ .+.++|+.+.
T Consensus 204 ~sp---------------~g~~l~s~~~dg----~i~iwd~~~~ 228 (319)
T 3frx_A 204 ASP---------------DGTLIASAGKDG----EIMLWNLAAK 228 (319)
T ss_dssp ECT---------------TSSEEEEEETTC----EEEEEETTTT
T ss_pred EcC---------------CCCEEEEEeCCC----eEEEEECCCC
No 472
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=53.38 E-value=59 Score=23.25 Aligned_cols=55 Identities=7% Similarity=0.044 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 006645 533 EKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQ 587 (637)
Q Consensus 533 ~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq 587 (637)
+..+.+.++..+.+..........++++....+.+..+.+...-..+.+++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~l~~~~~~I~~~k~qi~ 57 (60)
T 3htk_A 3 FANTKKTLENQVEELTEKCSLKTDEFLKAKEKINEIFEKLNTIRDEVIKKKNQNE 57 (60)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 473
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=52.84 E-value=1.5e+02 Score=28.53 Aligned_cols=158 Identities=9% Similarity=-0.003 Sum_probs=0.0
Q ss_pred CCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCC---------------CCCCCceEEEEE--CCEEEEEeCCCC
Q 006645 255 ENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKP---------------PVSRGGQSVTLV--GTSLVIFGGEDA 317 (637)
Q Consensus 255 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~---------------p~~r~~~~~~~~--~~~lyv~GG~~~ 317 (637)
++.+|+++-.... +++||+.+..+......+.. +....-++++.. ++.|||...
T Consensus 29 ~g~~l~v~~~~~~------i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~--- 99 (322)
T 2fp8_A 29 TNKGFYTSVQDGR------VIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC--- 99 (322)
T ss_dssp TCSSEEEECTTSE------EEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET---
T ss_pred CCCEEEEEcCCCe------EEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC---
Q ss_pred CCCCCCceEEEECCCCceEEecCCCCCCCcccccEEEEEc-CCEEEEEeCCCC------------CCCcCcEEEEECCCC
Q 006645 318 KRSLLNDLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHA-ERYLLIFGGGSH------------AACFNDLHVLDLQTM 384 (637)
Q Consensus 318 ~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~-~~~l~v~GG~~~------------~~~~~dl~~~d~~t~ 384 (637)
.+.+.+||+.+...+.+...........-..+++.. ++.|||.-.... ......+++||+.+.
T Consensus 100 ----~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 175 (322)
T 2fp8_A 100 ----YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK 175 (322)
T ss_dssp ----TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred ----CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC
Q ss_pred eeEecccCCCCCCCCcccEEEEECCccccceeeeeeccCCCCEEEEEcCCCCCCcccEEEEeCCC
Q 006645 385 EWSRPTQQGEIPTPRAGHAGVTIGENWFLGLSLVVSSYSGEDVIVAFGGYNGRYNNEVHVLKPSH 449 (637)
Q Consensus 385 ~W~~l~~~~~~p~~R~~hs~~~~~~~~yiG~s~~~~~~~g~~~l~v~GG~~~~~~~~v~~~d~~~ 449 (637)
....+......|.. .+.-.+ +..||+.-. ..+.|++|++..
T Consensus 176 ~~~~~~~~~~~p~g-----ia~~~d---------------g~~lyv~d~----~~~~I~~~~~~~ 216 (322)
T 2fp8_A 176 ETTLLLKELHVPGG-----AEVSAD---------------SSFVLVAEF----LSHQIVKYWLEG 216 (322)
T ss_dssp EEEEEEEEESCCCE-----EEECTT---------------SSEEEEEEG----GGTEEEEEESSS
T ss_pred EEEEeccCCccCcc-----eEECCC---------------CCEEEEEeC----CCCeEEEEECCC
No 474
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=52.74 E-value=1.6e+02 Score=28.07 Aligned_cols=178 Identities=7% Similarity=0.020 Sum_probs=0.0
Q ss_pred eEEEECCEEEEEcccCCCcccCcEEEEEcc-CCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCC
Q 006645 190 GAAVVQDKMYIYGGNHNGRYLSDMHILDLR-SWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDP 268 (637)
Q Consensus 190 a~~~~~~~lyv~GG~~~~~~~~~v~~yd~~-t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~ 268 (637)
+.++.++.||+... ...+++||+. ...|... .......+.+...+..+++|.....
T Consensus 102 ~~~~~~~~l~v~t~------~~~l~~~d~~g~~~~~~~----------------~~~~~~~~~~~~~~g~l~vgt~~~~- 158 (330)
T 3hxj_A 102 DFTIFEDILYVTSM------DGHLYAINTDGTEKWRFK----------------TKKAIYATPIVSEDGTIYVGSNDNY- 158 (330)
T ss_dssp CEEEETTEEEEECT------TSEEEEECTTSCEEEEEE----------------CSSCCCSCCEECTTSCEEEECTTSE-
T ss_pred CceEECCEEEEEec------CCEEEEEcCCCCEEEEEc----------------CCCceeeeeEEcCCCEEEEEcCCCE-
Q ss_pred CcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCCCCCcc
Q 006645 269 SEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGVPPSPR 348 (637)
Q Consensus 269 ~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~~p~~r 348 (637)
+++||+. +.-..... .+.......+..-++.||+.. ..+++||.....-.... ....
T Consensus 159 -----l~~~d~~-g~~~~~~~---~~~~~~~~~~~d~~g~l~v~t---------~~l~~~d~~g~~~~~~~-----~~~~ 215 (330)
T 3hxj_A 159 -----LYAINPD-GTEKWRFK---TNDAITSAASIGKDGTIYFGS---------DKVYAINPDGTEKWNFY-----AGYW 215 (330)
T ss_dssp -----EEEECTT-SCEEEEEE---CSSCCCSCCEECTTCCEEEES---------SSEEEECTTSCEEEEEC-----CSSC
T ss_pred -----EEEECCC-CCEeEEEe---cCCCceeeeEEcCCCEEEEEe---------CEEEEECCCCcEEEEEc-----cCCc
Q ss_pred cccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecccCCCCCCCCcccEEEEECCccccceeeeeeccCCCCEE
Q 006645 349 SDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPTQQGEIPTPRAGHAGVTIGENWFLGLSLVVSSYSGEDVI 428 (637)
Q Consensus 349 ~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~~~~~~p~~R~~hs~~~~~~~~yiG~s~~~~~~~g~~~l 428 (637)
...+.+...++.||+.... ..+++||......... ..........+..-++++|+ .+.++ .|
T Consensus 216 ~~~~~~~~~~g~l~v~t~~------~gl~~~~~~g~~~~~~----~~~~~~~~~~~~~~~g~l~v------~t~~g--gl 277 (330)
T 3hxj_A 216 TVTRPAISEDGTIYVTSLD------GHLYAINPDGTEKWRF----KTGKRIESSPVIGNTDTIYF------GSYDG--HL 277 (330)
T ss_dssp CCSCCEECTTSCEEEEETT------TEEEEECTTSCEEEEE----ECSSCCCSCCEECTTSCEEE------ECTTC--EE
T ss_pred ceeceEECCCCeEEEEcCC------CeEEEECCCCCEeEEe----eCCCCccccceEcCCCeEEE------ecCCC--CE
Q ss_pred EEE
Q 006645 429 VAF 431 (637)
Q Consensus 429 ~v~ 431 (637)
+.+
T Consensus 278 ~~~ 280 (330)
T 3hxj_A 278 YAI 280 (330)
T ss_dssp EEE
T ss_pred EEE
No 475
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=52.67 E-value=49 Score=30.02 Aligned_cols=102 Identities=14% Similarity=0.199 Sum_probs=0.0
Q ss_pred CcccCCCCCchhHHHHhHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhh-hhhHHHH
Q 006645 502 EPLISKHPETTEHLIATLKAEKEELESSLSK-EKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRC-FKLEVDV 579 (637)
Q Consensus 502 ~~~~~~~~~~~e~~~~~l~~~~~~le~~~~e-~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~-~~le~~~ 579 (637)
+......-.....++..+++.....-+++.. .....+.|+++|. +.+.+++.+|.--.... ..+++.+
T Consensus 44 ~~~l~e~~~~l~~~~~~l~~~l~p~~~e~~~~l~~~~~~Lr~~l~----------kdlee~r~~l~P~~~e~~~~~~~~~ 113 (185)
T 3r2p_A 44 NLKLLDNWDSVTSTFSKLREQLGPVTQEFWDNLEKETEGLRQEMS----------KDLEEVKAKVQPYLDDFQKKWQEEM 113 (185)
T ss_dssp TCCCCTTCSCSSCHHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHh----------ccHHHHHHHHHHHHHHHHHHHHHhH
Q ss_pred HHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHHHH
Q 006645 580 AELRQKLQT-----METLQKELELLQRQKAASEQAALNA 613 (637)
Q Consensus 580 ~el~~~lq~-----~q~~~~e~~~~~~~~~~~~~~~~~~ 613 (637)
.+++++|.= .....+.+++++.++.-.-++++.+
T Consensus 114 e~lr~~l~Py~~el~~~~~~~~e~Lr~~L~p~~e~lr~~ 152 (185)
T 3r2p_A 114 ELYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDR 152 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTTTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
No 476
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=52.06 E-value=46 Score=21.63 Aligned_cols=45 Identities=27% Similarity=0.394 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHh
Q 006645 537 SIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQT 588 (637)
Q Consensus 537 ~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~ 588 (637)
..+|.-++..++.+.+.+.+.---+..-+ ..||.+++.|++++++
T Consensus 5 vaqlenevaslenenetlkkknlhkkdli-------aylekeianlrkkiee 49 (49)
T 3he5_A 5 VAQLENEVASLENENETLKKKNLHKKDLI-------AYLEKEIANLRKKIEE 49 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHhhcccHHHHHhcccHHHHH-------HHHHHHHHHHHHHhcC
No 477
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=51.97 E-value=26 Score=27.63 Aligned_cols=46 Identities=11% Similarity=0.153 Sum_probs=0.0
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 006645 520 KAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQL 565 (637)
Q Consensus 520 ~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql 565 (637)
+....+++....+.+.++..|+.+|++++.+++.+..-|-++...+
T Consensus 35 k~r~~e~~~r~~~Le~EN~~Lr~~v~~L~~E~~~Lr~ll~~~p~~~ 80 (87)
T 1hjb_A 35 KMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPEPL 80 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcHHH
No 478
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=51.92 E-value=56 Score=31.11 Aligned_cols=99 Identities=13% Similarity=0.174 Sum_probs=0.0
Q ss_pred hhHHHHhHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHhhhH--------HHHHHHHHHHHHHHHHHhhh-hhhHHHHHH
Q 006645 512 TEHLIATLKAEKEELESSLSK-EKLQSIQLKQDLTEAESQNT--------DLYKELQSVRGQLAAEQSRC-FKLEVDVAE 581 (637)
Q Consensus 512 ~e~~~~~l~~~~~~le~~~~e-~~~~~~~l~~~l~e~e~~~~--------~~~~elq~~~~ql~~~q~~~-~~le~~~~e 581 (637)
.+++...+....+++.+.+.- .+.-..++.+.++++..++. .+.+.+++++.+|.---+.. .++.+.+.+
T Consensus 101 ~~el~~~~~~~~eelr~~L~P~~eel~~~~~~~~eel~~~L~p~~eelr~kl~~~veelk~~l~P~~ee~r~kl~~~~~e 180 (243)
T 2a01_A 101 LDDFQKKWQEEMELYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHVDALRTHLAPYSDELRQRLAARLEA 180 (243)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCCSCCSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q ss_pred HHH----HHHhHH-HHHHHHHHHHHHHHHHHHHH
Q 006645 582 LRQ----KLQTME-TLQKELELLQRQKAASEQAA 610 (637)
Q Consensus 582 l~~----~lq~~q-~~~~e~~~~~~~~~~~~~~~ 610 (637)
++. ..++++ ++...++++++.+.-.-+++
T Consensus 181 l~~~l~p~~~e~~~kl~~~~e~lr~~l~p~~e~l 214 (243)
T 2a01_A 181 LKENGGARLAEYHAKATEHLSTLSEKAKPALEDL 214 (243)
T ss_dssp HHHHHHHTTTSSSCCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHhcchhHHHHHHHHHHHHHHHHHHhHHHHHHH
No 479
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=51.75 E-value=45 Score=23.41 Aligned_cols=45 Identities=20% Similarity=0.228 Sum_probs=0.0
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q 006645 523 KEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAA 567 (637)
Q Consensus 523 ~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~ 567 (637)
+..-++++.+..+...+|-.+++.++.+-.+.+||+.....-|.+
T Consensus 6 ktRse~q~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~~LLkq 50 (58)
T 3a2a_A 6 KTRSERQLLRLKQMNVQLAAKIQHLEFSCSEKEQEIERLNKLLRQ 50 (58)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 480
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=51.74 E-value=74 Score=33.06 Aligned_cols=146 Identities=14% Similarity=0.067 Sum_probs=0.0
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEE---ccCCCCCcc
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIA---GHTKDPSEI 271 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~G---G~~~~~~~~ 271 (637)
+.++||.-....... +.+.++|+.|++-...-+.+ ..+ +.....-+.+|||.- +....+...
T Consensus 84 ~~~vyV~n~~~~~~~-~~VsVID~~t~~vv~~I~vG------------~~P--gia~SpDgk~lyVan~~~~~~~~G~~~ 148 (426)
T 3c75_H 84 ARRVYIQDPAHFAAI-TQQFVIDGSTGRILGMTDGG------------FLP--HPVAAEDGSFFAQASTVFERIARGKRT 148 (426)
T ss_dssp TTEEEEEECTTTCSS-EEEEEEETTTTEEEEEEEEC------------SSC--EEEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred CCEEEEECCCcCCCC-CeEEEEECCCCEEEEEEECC------------CCC--ceEECCCCCEEEEEeccccccccCCCC
Q ss_pred eeEEEEECCCCceEeeccCCCCC--------CCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEEecCCCC
Q 006645 272 IQVKVFDLQTCSWSTLKTYGKPP--------VSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDEIDAVGV 343 (637)
Q Consensus 272 ~~v~~yd~~t~~W~~~~~~g~~p--------~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~~~~~~~ 343 (637)
+.|.++|+.+++-..--. .+ ..-.+.....-+.++|+..-. ..+.+.++|+.+.+-..--..+.
T Consensus 149 ~~VsviD~~t~~vv~~I~---v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~-----~~~~VsVID~~t~kvv~~I~v~g 220 (426)
T 3c75_H 149 DYVEVFDPVTFLPIADIE---LPDAPRFLVGTYQWMNALTPDNKNLLFYQFS-----PAPAVGVVDLEGKTFDRMLDVPD 220 (426)
T ss_dssp EEEEEECTTTCCEEEEEE---ETTCCCCCBSCCGGGSEECTTSSEEEEEECS-----SSCEEEEEETTTTEEEEEEECCS
T ss_pred CEEEEEECCCCcEEEEEE---CCCccccccCCCcceEEEcCCCCEEEEEecC-----CCCeEEEEECCCCeEEEEEEcCC
Q ss_pred C----CCcccccEEEEEcCCEEEE
Q 006645 344 P----PSPRSDHAAAVHAERYLLI 363 (637)
Q Consensus 344 ~----p~~r~~h~~~~~~~~~l~v 363 (637)
. |.....+.+..-.+..+||
T Consensus 221 ~~~~~p~g~~~~v~~~~dG~~~~V 244 (426)
T 3c75_H 221 CYHIFPASPTVFYMNCRDGSLARV 244 (426)
T ss_dssp EEEEEEEETTEEEEEETTSSEEEE
T ss_pred ceeeccCCCcEEEEEcCCCCEEEE
No 481
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=51.72 E-value=1.5e+02 Score=27.47 Aligned_cols=172 Identities=13% Similarity=0.075 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCcc----cceEEEeCCEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE----
Q 006645 234 STESPSPALLTPCA----GHSLIPWENKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV---- 305 (637)
Q Consensus 234 ~~~~~~~~~p~~r~----~hs~v~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---- 305 (637)
.++...|..|..|. .-+++.+++.+|+|-|. .+|.++.....-..+......-+..-...=+++
T Consensus 15 ~~p~~~p~~p~~C~~~~~~DAi~~~~g~~~fFkg~--------~~Wr~~~~~~~~~~P~~I~~~wp~lp~~IDAA~~~~~ 86 (218)
T 1gen_A 15 PTPTLGPVTPEICKQDIVFDGIAQIRGEIFFFKDR--------FIWRTVTPRDKPMGPLLVATFWPELPEKIDAVYEAPQ 86 (218)
T ss_dssp ----CCCCCCCTTTSCCCCSEEEEETTEEEEEETT--------EEEEESSTTSCCEEEEEGGGTCTTSCSCCSEEEEETT
T ss_pred CCCCCCCCCcccCCCCCcEeEEEeCCCcEEEEECC--------EEEEEeCCCCccCCCEEHHHhcCCCCCCccEEEEECC
Q ss_pred CCEEEEEeCCCCCCCCCCceEEEECCCCce---EEecCCCCCCCcccccEEEEE-cCCEEEEEeCCCCCCCcCcEEEEEC
Q 006645 306 GTSLVIFGGEDAKRSLLNDLHILDLETMTW---DEIDAVGVPPSPRSDHAAAVH-AERYLLIFGGGSHAACFNDLHVLDL 381 (637)
Q Consensus 306 ~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W---~~~~~~~~~p~~r~~h~~~~~-~~~~l~v~GG~~~~~~~~dl~~~d~ 381 (637)
++++|+|=| +..|+|+-.+..- ..+...|-+..+..-.++... .++++|+|-| +..|.||.
T Consensus 87 ~~k~yfFkG--------~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d~ 151 (218)
T 1gen_A 87 EEKAVFFAG--------NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNE 151 (218)
T ss_dssp TTEEEEEET--------TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEET
T ss_pred CCEEEEEeC--------CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEEC
Q ss_pred CCCeeEec---ccC-CCCCCCCcccEEEEECCccccceeeeeeccCCCCEEEEEcCCCCCCcccEEEEeCCC
Q 006645 382 QTMEWSRP---TQQ-GEIPTPRAGHAGVTIGENWFLGLSLVVSSYSGEDVIVAFGGYNGRYNNEVHVLKPSH 449 (637)
Q Consensus 382 ~t~~W~~l---~~~-~~~p~~R~~hs~~~~~~~~yiG~s~~~~~~~g~~~l~v~GG~~~~~~~~v~~~d~~~ 449 (637)
.+..-..- .+. .-...|..-.++....+ .+.+|.|-| +..|+||...
T Consensus 152 ~~~~v~~gyPr~i~~~w~g~p~~idaAf~~~~---------------~g~~YfFkg------~~y~~~~~~~ 202 (218)
T 1gen_A 152 VKKKMDPGFPKLIADAWNAIPDNLDAVVDLQG---------------GGHSYFFKG------AYYLKLENQS 202 (218)
T ss_dssp TTTEECSSCCEEHHHHSSSCCSSCSEEEECTT---------------TCEEEEEET------TEEEEEETTE
T ss_pred ccccccCCCCcchhhccCCCCCCCCEEEEEcC---------------CCcEEEEEC------CEEEEEECCc
No 482
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=51.71 E-value=76 Score=24.01 Aligned_cols=67 Identities=6% Similarity=0.103 Sum_probs=0.0
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhHH-HHH
Q 006645 525 ELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQTME-TLQ 593 (637)
Q Consensus 525 ~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~~q-~~~ 593 (637)
+|..-+++++.+++.+-++-. ++-..-.+.++++.+.+....-......+.++.+++.++|.++ +++
T Consensus 6 DL~~il~eiRaQYE~ia~knr--~EaE~~y~~k~eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~ 73 (77)
T 3trt_A 6 DCTAAMRDVRQQYESVAAKNL--QEAEEWYKSKFADLSEAANRNNDALRQAKQESTEYRRQVQSLTMEVD 73 (77)
T ss_dssp CCHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
No 483
>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1
Probab=51.63 E-value=41 Score=21.34 Aligned_cols=33 Identities=15% Similarity=0.251 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 006645 530 LSKEKLQSIQLKQDLTEAESQNTDLYKELQSVR 562 (637)
Q Consensus 530 ~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~ 562 (637)
+-+.-+++++|..+|+.+..++..+.++-.+..
T Consensus 2 L~~~L~ENekLhk~ie~KdeeIa~Lk~eN~eL~ 34 (37)
T 1t6f_A 2 LYEALKENEKLHKEIEQKDNEIARLKKENKELA 34 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
No 484
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=51.61 E-value=1.2e+02 Score=30.63 Aligned_cols=154 Identities=16% Similarity=0.149 Sum_probs=0.0
Q ss_pred cceeEEEE-CCEEEEEc-------ccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEE
Q 006645 187 YEHGAAVV-QDKMYIYG-------GNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKL 258 (637)
Q Consensus 187 ~~~a~~~~-~~~lyv~G-------G~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~l 258 (637)
..|++++. +++||.+| |.........-.........-.+..... .+.....+..-++.|
T Consensus 62 ~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~-------------~G~~h~~al~~~G~v 128 (389)
T 3kci_A 62 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVN-------------SGGKHCLALSSEGEV 128 (389)
T ss_dssp TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEEC-------------TTCSEEEEEETTSCE
T ss_pred CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEEC-------------cCCCeEEEEcCCCCE
Q ss_pred EEEE-------ccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE-CCEEEEEe-------CCCCCCCCCC
Q 006645 259 LSIA-------GHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV-GTSLVIFG-------GEDAKRSLLN 323 (637)
Q Consensus 259 yv~G-------G~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~-~~~lyv~G-------G~~~~~~~~n 323 (637)
|.+| |.........-..+-.+.......++. -..|++++. ++.+|.+| |.........
T Consensus 129 ~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~-------G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~ 201 (389)
T 3kci_A 129 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA-------GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK 201 (389)
T ss_dssp EEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE-------CSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEE
T ss_pred EEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEe-------CcCeEEEEeCCCeEEEeCCCCCCCcCCCCCccccc
Q ss_pred ceEEEECCCCceEEecCCCCCCCcccccEEEEEcCCEEEEEe
Q 006645 324 DLHILDLETMTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFG 365 (637)
Q Consensus 324 ~i~~yd~~t~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~G 365 (637)
-..+-.+.......+. ......|++++..++.+|.+|
T Consensus 202 p~~v~~~~~~~v~~ia-----~G~g~~~t~~l~~~G~v~~wG 238 (389)
T 3kci_A 202 PKLVEALQGHRVVDIA-----CGSGDAQTLCLTDDDTVWSWG 238 (389)
T ss_dssp EEECGGGTTSCEEEEE-----ECCSSCEEEEEETTTEEEEEE
T ss_pred ceEecccCCCeEEEEE-----EcCCCcEEEEEccCCEEEEEe
No 485
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=51.56 E-value=76 Score=29.64 Aligned_cols=149 Identities=22% Similarity=0.242 Sum_probs=0.0
Q ss_pred eEEE-ECCEEEEEcccCCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCCCCcccceEEEeCCEEEEEEccCCCC
Q 006645 190 GAAV-VQDKMYIYGGNHNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWENKLLSIAGHTKDP 268 (637)
Q Consensus 190 a~~~-~~~~lyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~~~lyv~GG~~~~~ 268 (637)
|++. .++++|+|=| +.+|+++.....+....... .-...+..=-++...++++|+|-|.
T Consensus 22 Ai~~~~~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~---------~wpgLP~~IDAA~~~~~~~yfFkG~---- 81 (219)
T 1hxn_A 22 AMVSDNHGATYVFSG-------SHYWRLDTNRDGWHSWPIAH---------QWPQGPSTVDAAFSWEDKLYLIQDT---- 81 (219)
T ss_dssp EEEECTTSCEEEEET-------TEEEESSSSSCTTCCEEGGG---------TCTTSCSSCSEEEEETTEEEEEETT----
T ss_pred EEEECCCCcEEEEeC-------CEEEEEcCCCCCCCceEhhh---------hccCCCCCccEEEEECCcEEEecCC----
Q ss_pred CcceeEEEEE------CCCCceEeeccCCCCCCC-----CCceEEEEECCEEEEEeCCCCCCCCCCceEEEECCCCceEE
Q 006645 269 SEIIQVKVFD------LQTCSWSTLKTYGKPPVS-----RGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDLETMTWDE 337 (637)
Q Consensus 269 ~~~~~v~~yd------~~t~~W~~~~~~g~~p~~-----r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~~ 337 (637)
.+|+|+ +..+-=..+...-..|.. ....-....++++|+|-| +..|+||..+.
T Consensus 82 ----~yw~~~~~~~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG--------~~ywr~d~~~~---- 145 (219)
T 1hxn_A 82 ----KVYVFLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG--------RRLWWLDLKSG---- 145 (219)
T ss_dssp ----EEEEEECSSSCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET--------TEEEEEEGGGG----
T ss_pred ----EEEEEeCCCCceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC--------CEEEEEeCCCC----
Q ss_pred ecCCC-CCCCcccccEEEEE------------cCCEEEEEeCCCCCCCcCcEEEEEC
Q 006645 338 IDAVG-VPPSPRSDHAAAVH------------AERYLLIFGGGSHAACFNDLHVLDL 381 (637)
Q Consensus 338 ~~~~~-~~p~~r~~h~~~~~------------~~~~l~v~GG~~~~~~~~dl~~~d~ 381 (637)
..... ..|.+-..--+++. .++.+|+|-| +..|.||.
T Consensus 146 P~~i~~~~~g~p~~vdAa~~~~~~~~~~~~~~~~~~~YFFkg-------~~y~r~~~ 195 (219)
T 1hxn_A 146 AQATWTELPWPHEKVDGALCMEKPLGPNSCSTSGPNLYLIHG-------PNLYCYRH 195 (219)
T ss_dssp GGCCCEEECCSCSCCSEEEEESSCSSSCCSCSSSCEEEEEET-------TEEEEESS
T ss_pred ceEhhhcCCCCCCCcCEEEEccccccccceeccCCeEEEEEC-------CEEEEEeC
No 486
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=51.23 E-value=2.9e+02 Score=30.67 Aligned_cols=158 Identities=13% Similarity=0.107 Sum_probs=0.0
Q ss_pred CCEEEEEcccCCCcccCcEEEEEccCC--eE--EEeeecccccCCCCCCCCCCCCcccceEEEe---CCEEEEEEccCCC
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLRSW--AW--SKIQAKAVAESTESPSPALLTPCAGHSLIPW---ENKLLSIAGHTKD 267 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~t~--~W--~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~---~~~lyv~GG~~~~ 267 (637)
|..|++...... .++++++|+.+. .+ ..+ .....+.....- ++.||+....+
T Consensus 282 g~~l~~~~~~~~---~~~l~~~d~~~~~~~~~~~~l----------------~~~~~~~~~s~~~~~g~~l~~~t~~~-- 340 (751)
T 2xe4_A 282 TNTLCIGSQSPE---TAEVHLLDLRKGNAHNTLEIV----------------RPREKGVRYDVQMHGTSHLVILTNEG-- 340 (751)
T ss_dssp SSEEEEEEECSS---CEEEEEEESSSCTTCCCEEES----------------SCCCTTCCEEEEEETTTEEEEEECTT--
T ss_pred CCEEEEEecCCC---CceEEEEECCCCCCCceeEEe----------------ecCCCCceEEEeeeeCCEEEEEeCCC--
Q ss_pred CCcceeEEEEECCC-CceEe-eccCCCCCCCCCceEEEEECCEEEEEeCCCCCCCCCCceEEEEC-------CCCc-eEE
Q 006645 268 PSEIIQVKVFDLQT-CSWST-LKTYGKPPVSRGGQSVTLVGTSLVIFGGEDAKRSLLNDLHILDL-------ETMT-WDE 337 (637)
Q Consensus 268 ~~~~~~v~~yd~~t-~~W~~-~~~~g~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~n~i~~yd~-------~t~~-W~~ 337 (637)
......++.+|+.+ ..|.. +-+ ......-......++.|++..-.++ ...++++|+ .+.. -..
T Consensus 341 ~a~~~~L~~~d~~~~~~~~~~li~---~~~~~~l~~~~~~~~~lv~~~~~~g----~~~l~~~dl~~~~~~~~~g~~~~~ 413 (751)
T 2xe4_A 341 GAVNHKLLIAPRGQPSDWSHVLVD---HSEDVFMESIAVRSNYLVVAGRRAG----LTRIWTMMADSQDGVFKAGTGLRE 413 (751)
T ss_dssp TCTTCEEEEEETTSTTCCCCEEEC---CCSSEEEEEEEECSSEEEEEEEETT----EEEEEEEECCTTTSCCCTTTCCEE
T ss_pred CCCCcEEEEEcCCCcccceeeEEC---CCCCcEEEEEEEECCEEEEEEEeCC----EEEEEEEecccccccccCCccceE
Q ss_pred ecCCCCCCCcccccEEEE--------EcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEec
Q 006645 338 IDAVGVPPSPRSDHAAAV--------HAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRP 389 (637)
Q Consensus 338 ~~~~~~~p~~r~~h~~~~--------~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l 389 (637)
+ +.+...+...+ -.+..+|.+.+.. .-..++.||+.++..+.+
T Consensus 414 l------~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~---~P~~~~~~d~~~~~~~~l 464 (751)
T 2xe4_A 414 V------VMEEPIFTVHLVESQMLEYEEPTFRMEYSSLA---TPNTWFDVSPQDHSRTAV 464 (751)
T ss_dssp C------CCCCSSCEEEECGGGCCCTTCSCEEEEEEETT---EEEEEEEECTTTCCEEEE
T ss_pred E------CCCCceeEEEeccCcccCCCCCEEEEEEeCCC---CCCEEEEEECCCCcEEEE
No 487
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=51.07 E-value=2e+02 Score=28.73 Aligned_cols=194 Identities=12% Similarity=0.140 Sum_probs=0.0
Q ss_pred CCEEEEEcccCCCcccCcEEEEEcc--CCeEEEeeecccccCCCCCCCCCCCCcccceEEEe--CC-EEEEEEccCCCCC
Q 006645 195 QDKMYIYGGNHNGRYLSDMHILDLR--SWAWSKIQAKAVAESTESPSPALLTPCAGHSLIPW--EN-KLLSIAGHTKDPS 269 (637)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~v~~yd~~--t~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~--~~-~lyv~GG~~~~~~ 269 (637)
++.+++.|. -..+.++|+. ...+..+.... ...........++.+ ++ .+++.|+.++.
T Consensus 188 ~~~~l~s~~------d~~i~iwd~~~~~~~~~~~~~~~---------~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~-- 250 (447)
T 3dw8_B 188 DYETYLSAD------DLRINLWHLEITDRSFNIVDIKP---------ANMEELTEVITAAEFHPNSCNTFVYSSSKGT-- 250 (447)
T ss_dssp TSSEEEEEC------SSEEEEEETTEEEEEEEEEECCC---------SSGGGCCCCEEEEEECSSCTTEEEEEETTSC--
T ss_pred CCCEEEEeC------CCeEEEEECCCCCceeeeeeccc---------ccccccCcceEEEEECCCCCcEEEEEeCCCe--
Q ss_pred cceeEEEEECCCCce----EeeccCCCCCCCCC-------ceEEEEE--CCEEEEEeCCCCCCCCCCceEEEECCCCceE
Q 006645 270 EIIQVKVFDLQTCSW----STLKTYGKPPVSRG-------GQSVTLV--GTSLVIFGGEDAKRSLLNDLHILDLETMTWD 336 (637)
Q Consensus 270 ~~~~v~~yd~~t~~W----~~~~~~g~~p~~r~-------~~~~~~~--~~~lyv~GG~~~~~~~~n~i~~yd~~t~~W~ 336 (637)
+.+||+.+..- ...-.....|..+. ...++.+ ++.+++.|+ . +.+.+||+.+
T Consensus 251 ----i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~------~-~~v~iwd~~~---- 315 (447)
T 3dw8_B 251 ----IRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD------Y-LSVKVWDLNM---- 315 (447)
T ss_dssp ----EEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE------S-SEEEEEETTC----
T ss_pred ----EEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee------C-CeEEEEeCCC----
Q ss_pred EecCCCCCCCcccccE--------------------EEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecccCCCCC
Q 006645 337 EIDAVGVPPSPRSDHA--------------------AAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPTQQGEIP 396 (637)
Q Consensus 337 ~~~~~~~~p~~r~~h~--------------------~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~~~~~~p 396 (637)
.+.+......|. ++...++..++.|+.+ ..|.+||+.+..-..+.......
T Consensus 316 ----~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~d-----g~v~iwd~~~~~~~~~~~~~~~~ 386 (447)
T 3dw8_B 316 ----ENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYN-----NFFRMFDRNTKRDITLEASRENN 386 (447)
T ss_dssp ----CSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECST-----TEEEEEETTTCCEEEEECCSTTC
T ss_pred ----CccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccC-----CEEEEEEcCCCcceeeeeccccc
Q ss_pred CCCcccE----------------------------EEEECCccccceeeeeeccCCCCEEEEEcCCCCCCcccEEEEeCC
Q 006645 397 TPRAGHA----------------------------GVTIGENWFLGLSLVVSSYSGEDVIVAFGGYNGRYNNEVHVLKPS 448 (637)
Q Consensus 397 ~~R~~hs----------------------------~~~~~~~~yiG~s~~~~~~~g~~~l~v~GG~~~~~~~~v~~~d~~ 448 (637)
.++.... ++...+. .++++|+ .+.+++|...
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~----------------~~la~~~-----~~~~~~~~~~ 445 (447)
T 3dw8_B 387 KPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKE----------------NIIAVAT-----TNNLYIFQDK 445 (447)
T ss_dssp CTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSS----------------SEEEEEC-----SSCEEEEECC
T ss_pred ccccccCCccccccCCcccccccccccccCCceeEEEECCCC----------------CEEEEEe-----cceeeeeccc
Q ss_pred CC
Q 006645 449 HK 450 (637)
Q Consensus 449 ~~ 450 (637)
.|
T Consensus 446 ~n 447 (447)
T 3dw8_B 446 VN 447 (447)
T ss_dssp C-
T ss_pred cC
No 488
>2ve7_A Kinetochore protein HEC1, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_C*
Probab=50.87 E-value=30 Score=34.49 Aligned_cols=67 Identities=13% Similarity=0.138 Sum_probs=0.0
Q ss_pred HhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q 006645 517 ATLKAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKL 586 (637)
Q Consensus 517 ~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~l 586 (637)
....+-...+++....++++++.|+.+.+++++++++++++.+.... ...++..+|++...-.++.|
T Consensus 167 ~~~~e~~~~~~~~~n~~~~eie~L~~~~~~L~eEi~~Le~~~e~~~k---~n~~rl~~Lqk~~~~~~~~L 233 (315)
T 2ve7_A 167 EMNAELQSKLKDLFNVDAFKLESLEAKNRALNEQIARLEQERSTANK---ANAERLKRLQKSADLYKDRL 233 (315)
T ss_dssp HHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHTTTTTHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh---hhHHHHHHHHHHHHHHHHHc
No 489
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Probab=50.69 E-value=14 Score=33.27 Aligned_cols=41 Identities=17% Similarity=0.282 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006645 574 KLEVDVAELRQKLQTMETLQKELELLQRQKAASEQAALNAK 614 (637)
Q Consensus 574 ~le~~~~el~~~lq~~q~~~~e~~~~~~~~~~~~~~~~~~~ 614 (637)
+|..++.+|++.++.+..|..+++.|+.++..+.+.+.+..
T Consensus 3 ~l~~~~~~l~~~~~~~~~l~~~~~~l~~~l~~~~~~l~~~~ 43 (182)
T 3kqg_A 3 TLNAQIPELKSDLEKASALNTKIRALQGSLENMSKLLKRQN 43 (182)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 490
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=50.57 E-value=2.1e+02 Score=28.72 Aligned_cols=212 Identities=9% Similarity=-0.014 Sum_probs=0.0
Q ss_pred CCEEEEEccc----CCCcccCcEEEEEccCCeEEEeeecccccCCCCCCCCCC--------CCcccceEEEeCCEEEEEE
Q 006645 195 QDKMYIYGGN----HNGRYLSDMHILDLRSWAWSKIQAKAVAESTESPSPALL--------TPCAGHSLIPWENKLLSIA 262 (637)
Q Consensus 195 ~~~lyv~GG~----~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~p--------~~r~~hs~v~~~~~lyv~G 262 (637)
+..|||..-. ..+...+.+.+||+.+.+-...-+. + ..-.+.....-+.+||+..
T Consensus 77 g~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~-------------~~~~~~~~g~~p~~~~~spDG~~l~v~n 143 (373)
T 2mad_H 77 GSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIEL-------------PDAPRFDVGPYSWMNANTPNNADLLFFQ 143 (373)
T ss_pred CCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEEC-------------CCccccccCCCccceEECCCCCEEEEEe
Q ss_pred ccCCCCCcceeEEEEECCCCceEee-ccCCC----CCCCCCceEEEEECCEEEEEeCCCCCCC-----------------
Q 006645 263 GHTKDPSEIIQVKVFDLQTCSWSTL-KTYGK----PPVSRGGQSVTLVGTSLVIFGGEDAKRS----------------- 320 (637)
Q Consensus 263 G~~~~~~~~~~v~~yd~~t~~W~~~-~~~g~----~p~~r~~~~~~~~~~~lyv~GG~~~~~~----------------- 320 (637)
-.... .+.++| .+++-... -+.+. .|.....+.+..-++++.++-- .+...
T Consensus 144 ~~~~~-----~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~ 216 (373)
T 2mad_H 144 FAAGP-----AVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLT 216 (373)
T ss_pred cCCCC-----eEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceee
Q ss_pred ---------------CCCceEEEECCCC------ceEEecCCCCCCCccccc---EEEEEcCCEEEEEeC----CCCCCC
Q 006645 321 ---------------LLNDLHILDLETM------TWDEIDAVGVPPSPRSDH---AAAVHAERYLLIFGG----GSHAAC 372 (637)
Q Consensus 321 ---------------~~n~i~~yd~~t~------~W~~~~~~~~~p~~r~~h---~~~~~~~~~l~v~GG----~~~~~~ 372 (637)
+.+.+++.|+.+. .|............+-.. .+..-.+++|||... ..+...
T Consensus 217 ~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~ 296 (373)
T 2mad_H 217 QPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAA 296 (373)
T ss_pred cceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCC
Q ss_pred cCcEEEEECCCCeeEecccCCCCCCCCcccEEEEECCccccceeeeeeccCCCC-EEEEEcCCCCCCcccEEEEeCCCC
Q 006645 373 FNDLHVLDLQTMEWSRPTQQGEIPTPRAGHAGVTIGENWFLGLSLVVSSYSGED-VIVAFGGYNGRYNNEVHVLKPSHK 450 (637)
Q Consensus 373 ~~dl~~~d~~t~~W~~l~~~~~~p~~R~~hs~~~~~~~~yiG~s~~~~~~~g~~-~l~v~GG~~~~~~~~v~~~d~~~~ 450 (637)
.++|+++|+.+.+-.. ..+.+...+++..-.+ +. .+|+..+ ..+++.++|..+.
T Consensus 297 ~~~V~VID~~t~~vv~-----~i~~g~~p~~i~~s~D---------------g~~~l~v~~~----~~~~V~ViD~~t~ 351 (373)
T 2mad_H 297 AKEVTSVTGLVGQTSS-----QISLGHDVDAISVAQD---------------GGPDLYALSA----GTEVLHIYDAGAG 351 (373)
T ss_pred CCeEEEEECCCCEEEE-----EEECCCCcCeEEECCC---------------CCeEEEEEcC----CCCeEEEEECCCC
No 491
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=50.33 E-value=70 Score=34.05 Aligned_cols=69 Identities=14% Similarity=0.053 Sum_probs=0.0
Q ss_pred HHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH-----------hhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHH
Q 006645 514 HLIATLKAEKEELESSLSKEKLQSIQLKQDLTEAE-----------SQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAEL 582 (637)
Q Consensus 514 ~~~~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e-----------~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el 582 (637)
+.+..|.++.++++.++++.+.+.+.+.++|..+. ...+++..+..++..++.+.+.+..++++++.++
T Consensus 70 ~~~~~ld~~~r~~~~~~~~l~~~rn~~sk~i~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~i~~l~~~~~~~~~~l~~~ 149 (501)
T 1wle_A 70 PGIISTWQELRQLREQIRSLEEEKEAVTEAVRALVVNQDNSQVQQDPQYQSLRARGREIRKQLTLLYPKEAQLEEQFYLR 149 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 492
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=50.30 E-value=1.8e+02 Score=28.00 Aligned_cols=106 Identities=7% Similarity=-0.003 Sum_probs=0.0
Q ss_pred chhHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH-------hhhhhhHHHHHHHH
Q 006645 511 TTEHLIATLKAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQ-------SRCFKLEVDVAELR 583 (637)
Q Consensus 511 ~~e~~~~~l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q-------~~~~~le~~~~el~ 583 (637)
+...+....+...+..++.....+.+......++.........+.+++...+....... ....+++.+..+.+
T Consensus 99 ~l~~~~~~~~~~rK~~~~~~~k~~k~~~~~~~~l~KaKk~Y~~~~~e~e~a~~~~~~a~~~~~~s~~~~eK~~~k~~~~~ 178 (301)
T 2efk_A 99 ELTKYSQEMKQERKMHFQEGRRAQQQLENGFKQLENSKRKFERDCREAEKAAQTAERLDQDINATKADVEKAKQQAHLRS 178 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCHHHHHHHHHHHHHHH
Q ss_pred HHHHh--------HHHHHHH-HHHHHHHHHHHHHHHHHHhhc
Q 006645 584 QKLQT--------METLQKE-LELLQRQKAASEQAALNAKRQ 616 (637)
Q Consensus 584 ~~lq~--------~q~~~~e-~~~~~~~~~~~~~~~~~~~r~ 616 (637)
++++. ++.+.+. -..+.+.+...-+.+++.++.
T Consensus 179 ~~~~~a~~~Y~~~v~~~n~~~~~~~~~~~p~~~~~lQ~lee~ 220 (301)
T 2efk_A 179 HMAEESKNEYAAQLQRFNRDQAHFYFSQMPQIFDKLQDMDER 220 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 493
>1lrz_A FEMA, factor essential for expression of methicillin resistance; peptidoglycan, X-RAY crystallography, multiple anomalous dispersion; 2.10A {Staphylococcus aureus} SCOP: a.2.7.4 d.108.1.4 d.108.1.4
Probab=50.20 E-value=33 Score=35.69 Aligned_cols=75 Identities=13% Similarity=0.112 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHHHh----hcC-------------CCc
Q 006645 561 VRGQLAAEQSRCFKLEVDVAELRQKLQT---METLQKELELLQRQKAASEQAALNAK----RQS-------------SGG 620 (637)
Q Consensus 561 ~~~ql~~~q~~~~~le~~~~el~~~lq~---~q~~~~e~~~~~~~~~~~~~~~~~~~----r~~-------------~~g 620 (637)
....++.-+++..+|++++.++.+++++ .++..+++.++.+|+...++.+.+++ +.. +.-
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lAgal~~~~~~~ 324 (426)
T 1lrz_A 245 FDEYIKELNEERDILNKDLNKALKDIEKRPENKKAHNKRDNLQQQLDANEQKIEEGKRLQEEHGNELPISAGFFFINPFE 324 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSEEEEEEEEEEECSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeEEEEEEEECCE
Q ss_pred eeeeccCCCCCCCcC
Q 006645 621 MWGWLAGAPPTQNAY 635 (637)
Q Consensus 621 ~w~~~~~~~~~~~~~ 635 (637)
.|+|.+|+-++-+.+
T Consensus 325 ~~y~y~gs~~~~~~~ 339 (426)
T 1lrz_A 325 VVYYAGGTSNAFRHF 339 (426)
T ss_dssp EEEEEEEECGGGGGG
T ss_pred EEEEecCchhhHhhc
No 494
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=50.14 E-value=17 Score=27.10 Aligned_cols=41 Identities=15% Similarity=0.133 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhH
Q 006645 536 QSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLE 576 (637)
Q Consensus 536 ~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le 576 (637)
..+.+.+.|..++..+.+++.+|+++...+++-++...+++
T Consensus 12 ~~e~~~~~i~~Kde~I~eLE~~L~~kd~eI~eLr~~LdK~q 52 (67)
T 1zxa_A 12 LEEDFAKILMLKEERIKELEKRLSEKEEEIQELKRKLHKCQ 52 (67)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 495
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=50.11 E-value=64 Score=29.73 Aligned_cols=105 Identities=10% Similarity=0.085 Sum_probs=0.0
Q ss_pred hHHHHhHHHHHHHHhhhh--hHHHHHHHHHHHHHHHHHhhh-----------HHHHHHHHHHHHHHHHHHhhhhhhHHHH
Q 006645 513 EHLIATLKAEKEELESSL--SKEKLQSIQLKQDLTEAESQN-----------TDLYKELQSVRGQLAAEQSRCFKLEVDV 579 (637)
Q Consensus 513 e~~~~~l~~~~~~le~~~--~e~~~~~~~l~~~l~e~e~~~-----------~~~~~elq~~~~ql~~~q~~~~~le~~~ 579 (637)
+.+......+...|+..+ +........+...|.+++..+ +.+.++.+..++.|...+.++..|+..-
T Consensus 91 ~~L~~~~~~R~~~L~~a~~~~~F~~~~~e~~~Wl~ek~~~l~~~~g~dl~~v~~l~~~h~~~e~dL~~~~~~v~~l~~~a 170 (218)
T 3edu_A 91 ADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVA 170 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------CCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHH--HhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 006645 580 AELRQKL--QTMETLQKELELLQRQKAASEQAALNAKRQS 617 (637)
Q Consensus 580 ~el~~~l--q~~q~~~~e~~~~~~~~~~~~~~~~~~~r~~ 617 (637)
.+|.+.- .....++++++++.+.+..+.....++..++
T Consensus 171 ~~L~~~~~~~~a~~i~~~~~~l~~~W~~L~~~~~~R~~~L 210 (218)
T 3edu_A 171 TRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQL 210 (218)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC------
T ss_pred HHHHHHCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 496
>2oto_A M protein; helical coiled coil, fibrinogen-binding, virulence factor, S active protein, toxin; 3.04A {Streptococcus pyogenes serotype M1} PDB: 2xny_M
Probab=50.04 E-value=1.3e+02 Score=26.24 Aligned_cols=96 Identities=16% Similarity=0.131 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhh-HHHHHHHHHHHHhHHHHHH---
Q 006645 519 LKAEKEELESSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKL-EVDVAELRQKLQTMETLQK--- 594 (637)
Q Consensus 519 l~~~~~~le~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~l-e~~~~el~~~lq~~q~~~~--- 594 (637)
+..+...|.....+.......+..+..+.+...++++...+.++..+...+.....+ +.++.+.......+.+...
T Consensus 27 l~~eN~~Lk~e~e~l~~~~~~~~~~~~eL~~~~~~Le~~n~~L~~~lke~~~~~~~l~ek~~~e~~~le~~L~e~~e~~~ 106 (155)
T 2oto_A 27 LRHENKDLKARLENAMEVAGRDFKRAEELEKAKQALEDQRKDLETKLKELQQDYDLAKESTSWDRQRLEKELEEKKEALE 106 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred -HHHHHHH---HHHHHHHHHHHHh
Q 006645 595 -ELELLQR---QKAASEQAALNAK 614 (637)
Q Consensus 595 -e~~~~~~---~~~~~~~~~~~~~ 614 (637)
.++...+ ++...++++...+
T Consensus 107 ~~l~~~~e~~~~~~~~~~e~~~~~ 130 (155)
T 2oto_A 107 LAIDQASRDYHRATALEKELEEKK 130 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
No 497
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=50.01 E-value=59 Score=22.29 Aligned_cols=42 Identities=17% Similarity=0.188 Sum_probs=0.0
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHh
Q 006645 547 AESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQT 588 (637)
Q Consensus 547 ~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq~ 588 (637)
.++++-.+.+-....-..+++-+..|.++++|+..|+.-|.+
T Consensus 2 aeq~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~LLkq 43 (48)
T 3vmx_A 2 SERQILRLKQINIQLATKIQHLEFSCSEKEQEIERLNKLLKQ 43 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
No 498
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=49.91 E-value=79 Score=23.70 Aligned_cols=60 Identities=13% Similarity=0.076 Sum_probs=0.0
Q ss_pred HHHhhhhhHHHHH-HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q 006645 524 EELESSLSKEKLQ-SIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELR 583 (637)
Q Consensus 524 ~~le~~~~e~~~~-~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~ 583 (637)
..+..+-+..+.. .++-++.|.++|.++.+++...+....+...-......|+.++.+|+
T Consensus 10 ~kR~~qNR~AQRafReRK~~~i~~LE~~v~~le~~~~~l~~en~~Lr~~i~~L~~El~~lr 70 (70)
T 1gd2_E 10 SKRKAQNRAAQRAFRKRKEDHLKALETQVVTLKELHSSTTLENDQLRQKVRQLEEELRILK 70 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHC-
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
No 499
>2xzr_A Immunoglobulin-binding protein EIBD; cell adhesion, trimeric autotransporter adhesin, TAA; 2.80A {Enterobacteria phage p-eibd}
Probab=49.29 E-value=95 Score=24.47 Aligned_cols=60 Identities=13% Similarity=0.278 Sum_probs=0.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 006645 528 SSLSKEKLQSIQLKQDLTEAESQNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQ 587 (637)
Q Consensus 528 ~~~~e~~~~~~~l~~~l~e~e~~~~~~~~elq~~~~ql~~~q~~~~~le~~~~el~~~lq 587 (637)
..+..-..+.++-...+...++++.+-.+|+.+...|.++--.+..-+|.+++.+++-+.
T Consensus 48 ~aiaanTr~lQqh~aRlnsqQrQI~ENhkEMKq~aaqsaaLlsk~yh~ene~ar~kkl~~ 107 (114)
T 2xzr_A 48 KAIAANTRTLQQHSARLDSQQRQINENHKEMKQIEDKIEEILSKIYHIENEIARIKKLIK 107 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
No 500
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=49.19 E-value=3.1e+02 Score=30.31 Aligned_cols=233 Identities=8% Similarity=-0.018 Sum_probs=0.0
Q ss_pred CCCCCcceeEEEE--CCEEEEEcccCCCcccCcEEEEEccC----CeEEEeeecccccCCCCCCCCCCCCcccceEEEeC
Q 006645 182 RPKARYEHGAAVV--QDKMYIYGGNHNGRYLSDMHILDLRS----WAWSKIQAKAVAESTESPSPALLTPCAGHSLIPWE 255 (637)
Q Consensus 182 ~p~~R~~~a~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~t----~~W~~~~~~~~~~~~~~~~~~~p~~r~~hs~v~~~ 255 (637)
.+....-++++.. ++.||+. ......|+++++.+ ..-..+.... ...-.+.++...+
T Consensus 402 ~~~~~~p~gla~d~~~~~Ly~s-----D~~~~~I~~~~~~g~~~~~~~~~~i~~~------------~~~P~glavD~~~ 464 (699)
T 1n7d_A 402 IPNLRNVVALDTEVASNRIYWS-----DLSQRMICSTQLDRAHGVSSYDTVISRD------------IQAPDGLAVDWIH 464 (699)
T ss_dssp SCCCTTCCCCEEETTTTEEEEC-----CTTTTSBEEEESCCCCC-CCCCCBCCSC------------C--CCCEECCCSS
T ss_pred eccCcceEEEccccccCeEEEE-----ecCCCeEEEEecCCCCCCcceEEEEeCC------------CCCcceEEEEeeC
Q ss_pred CEEEEEEccCCCCCcceeEEEEECCCCceEeeccCCCCCCCCCceEEEEE---CCEEEEEeCCCCCCCCCCceEEEECCC
Q 006645 256 NKLLSIAGHTKDPSEIIQVKVFDLQTCSWSTLKTYGKPPVSRGGQSVTLV---GTSLVIFGGEDAKRSLLNDLHILDLET 332 (637)
Q Consensus 256 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~n~i~~yd~~t 332 (637)
+.||+.-..... |.++++....-..+ ...........++ ++.||+..-. ..+.|+++++..
T Consensus 465 g~LY~tD~~~~~------I~v~d~dg~~~~~l-----~~~~~~~P~giavDp~~g~ly~td~~-----~~~~I~~~~~dG 528 (699)
T 1n7d_A 465 SNIYWTDSVLGT------VSVADTKGVKRKTL-----FREQGSKPRAIVVDPVHGFMYWTDWG-----TPAKIKKGGLNG 528 (699)
T ss_dssp SBCEECCTTTSC------EEEEBSSSCCEEEE-----CCCSSCCCCCEECCSSSSCCEECCCS-----SSCCEEBCCSSS
T ss_pred CcEEEEeccCCe------EEEEecCCCceEEE-----EeCCCCCcceEEEccCCCcEEEcccC-----CCCeEEEEeCCC
Q ss_pred CceEEecCCCCCCCcccccEEEEEcCCEEEEEeCCCCCCCcCcEEEEECCCCeeEecccCCCCCCCCcccEEEEECCccc
Q 006645 333 MTWDEIDAVGVPPSPRSDHAAAVHAERYLLIFGGGSHAACFNDLHVLDLQTMEWSRPTQQGEIPTPRAGHAGVTIGENWF 412 (637)
Q Consensus 333 ~~W~~~~~~~~~p~~r~~h~~~~~~~~~l~v~GG~~~~~~~~dl~~~d~~t~~W~~l~~~~~~p~~R~~hs~~~~~~~~y 412 (637)
..-..+... ....-...++-..++.||+.-... +.|+++|+....-..+.. ........+++++.++
T Consensus 529 ~~~~~l~~~---~l~~PnGlavd~~~~~LY~aD~~~-----~~I~~~d~dG~~~~~~~~--~~~~~~~P~glavd~~--- 595 (699)
T 1n7d_A 529 VDIYSLVTE---NIQWPNGITLDLLSGRLYWVDSKL-----HSISSIDVNGGNRKTILE--DEKRLAHPFSLAVFED--- 595 (699)
T ss_dssp CCCCEESCS---SCSSCCCEEECTTTCCEEEEETTT-----TEEEEECSSSSCCEEECC--CSSSCSSCCCCEEETT---
T ss_pred CCeeEEEeC---CCCCccEEEEeccCCEEEEEecCC-----CeEEEEccCCCceEEEEe--cCCcCCCceEeEEECC---
Q ss_pred cceeeeeeccCCCCEEEEEcCCCCCCcccEEEEeCCCCcccccccCCCCCCCCccccccCCCCCcc
Q 006645 413 LGLSLVVSSYSGEDVIVAFGGYNGRYNNEVHVLKPSHKSTLSSKMIETPVPDSVSAVQNNTNPTRD 478 (637)
Q Consensus 413 iG~s~~~~~~~g~~~l~v~GG~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (637)
.||+.-. ..+.|.++++.+.............+.......+...+...
T Consensus 596 --------------~lywtd~----~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~~~~~qp~~~ 643 (699)
T 1n7d_A 596 --------------KVFWTDI----INEAIFSANRLTGSDVNLLAENLLSPEDMVLFHQLTQPRGV 643 (699)
T ss_dssp --------------EEEEECS----TTTCEEEEETTTEEEEECCCTTCSSCCCCCBCSSSSSCCSC
T ss_pred --------------EEEEEeC----CCCeEEEEEccCCCceEEeecCCCCCcEEEEeCcccCCCCC
Done!