Query 006648
Match_columns 637
No_of_seqs 277 out of 1416
Neff 5.0
Searched_HMMs 46136
Date Thu Mar 28 12:28:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006648.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006648hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00176 galactinol synthase 100.0 3E-45 6.4E-50 386.6 24.3 235 301-551 19-295 (333)
2 cd02537 GT8_Glycogenin Glycoge 100.0 5.5E-40 1.2E-44 331.7 22.8 230 305-550 1-240 (240)
3 cd06914 GT8_GNT1 GNT1 is a fun 100.0 1.8E-36 3.8E-41 313.5 20.8 242 305-550 1-278 (278)
4 cd00505 Glyco_transf_8 Members 100.0 2.4E-31 5.2E-36 268.6 18.0 202 306-517 2-245 (246)
5 cd04194 GT8_A4GalT_like A4GalT 100.0 2.2E-30 4.7E-35 260.7 13.1 202 312-517 6-247 (248)
6 PF01501 Glyco_transf_8: Glyco 100.0 1.6E-30 3.4E-35 255.8 10.6 201 311-519 4-249 (250)
7 PRK15171 lipopolysaccharide 1, 100.0 1E-28 2.3E-33 261.8 19.8 217 311-551 30-290 (334)
8 cd06429 GT8_like_1 GT8_like_1 99.9 1.1E-26 2.5E-31 238.4 17.9 204 316-548 9-257 (257)
9 COG1442 RfaJ Lipopolysaccharid 99.9 7E-27 1.5E-31 246.6 16.1 200 312-520 8-248 (325)
10 cd06431 GT8_LARGE_C LARGE cata 99.9 7.9E-26 1.7E-30 234.7 20.2 202 305-519 3-254 (280)
11 KOG1950 Glycosyl transferase, 99.9 6.3E-28 1.4E-32 258.6 4.5 353 241-598 7-368 (369)
12 cd06430 GT8_like_2 GT8_like_2 99.9 3.6E-22 7.9E-27 209.1 17.0 198 308-514 3-257 (304)
13 cd06432 GT8_HUGT1_C_like The C 99.9 1.5E-21 3.2E-26 199.5 15.2 185 312-512 7-239 (248)
14 PLN02523 galacturonosyltransfe 99.8 1.2E-20 2.7E-25 207.9 17.4 213 318-555 258-553 (559)
15 PLN02718 Probable galacturonos 99.8 3.2E-20 7E-25 206.7 13.7 193 315-519 321-576 (603)
16 PLN02769 Probable galacturonos 99.8 1.1E-19 2.5E-24 203.1 13.5 153 378-555 437-624 (629)
17 PLN02867 Probable galacturonos 99.8 2E-19 4.4E-24 198.4 10.1 133 379-520 331-509 (535)
18 PLN02659 Probable galacturonos 99.8 3.6E-19 7.7E-24 195.9 10.0 156 378-559 329-530 (534)
19 PLN02870 Probable galacturonos 99.8 5.4E-19 1.2E-23 194.5 8.6 132 378-519 328-505 (533)
20 PLN02742 Probable galacturonos 99.8 6.2E-18 1.3E-22 186.5 14.9 153 378-555 338-529 (534)
21 PLN02829 Probable galacturonos 99.7 4.7E-18 1E-22 189.4 10.5 156 378-559 442-636 (639)
22 PLN02910 polygalacturonate 4-a 99.7 3E-17 6.5E-22 182.9 10.1 131 379-519 461-630 (657)
23 COG5597 Alpha-N-acetylglucosam 99.7 1.1E-17 2.3E-22 173.0 0.9 200 301-519 67-339 (368)
24 PF11051 Mannosyl_trans3: Mann 98.1 1.9E-05 4.1E-10 82.3 10.8 112 314-434 9-124 (271)
25 PF03407 Nucleotid_trans: Nucl 97.7 0.00027 5.8E-09 70.0 10.5 122 345-467 11-153 (212)
26 KOG1879 UDP-glucose:glycoprote 94.5 0.27 5.9E-06 60.5 11.7 171 306-478 1182-1400(1470)
27 PLN03182 xyloglucan 6-xylosylt 94.3 0.58 1.3E-05 52.0 12.8 131 386-522 192-368 (429)
28 KOG1928 Alpha-1,4-N-acetylgluc 93.0 0.48 1E-05 52.2 9.3 185 281-470 105-319 (409)
29 PLN03181 glycosyltransferase; 89.5 2.8 6E-05 47.0 10.8 97 380-479 182-325 (453)
30 cd02525 Succinoglycan_BP_ExoA 76.6 11 0.00024 36.8 8.0 82 320-407 14-97 (249)
31 PF05637 Glyco_transf_34: gala 76.2 2.5 5.4E-05 43.7 3.4 87 380-467 60-191 (239)
32 cd02515 Glyco_transf_6 Glycosy 75.1 20 0.00044 38.2 9.8 165 301-479 32-246 (271)
33 cd00761 Glyco_tranf_GTA_type G 73.7 22 0.00047 30.8 8.3 83 318-409 9-95 (156)
34 cd06423 CESA_like CESA_like is 72.6 23 0.00049 31.5 8.4 80 319-407 10-94 (180)
35 cd06439 CESA_like_1 CESA_like_ 72.0 22 0.00048 35.2 8.9 100 302-412 28-131 (251)
36 cd04186 GT_2_like_c Subfamily 70.9 37 0.0008 30.6 9.5 108 318-437 9-122 (166)
37 PF00535 Glycos_transf_2: Glyc 69.4 14 0.00029 33.1 6.2 86 316-413 11-101 (169)
38 PF07801 DUF1647: Protein of u 67.7 31 0.00068 33.4 8.5 67 300-369 57-125 (142)
39 cd06437 CESA_CaSu_A2 Cellulose 64.8 30 0.00064 34.1 8.1 21 387-407 83-103 (232)
40 cd06433 GT_2_WfgS_like WfgS an 64.5 34 0.00073 31.9 8.1 85 319-412 11-97 (202)
41 PRK15384 type III secretion sy 60.4 6.8 0.00015 41.2 2.7 47 392-438 216-265 (336)
42 PRK15382 non-LEE encoded effec 59.7 7.3 0.00016 41.0 2.8 47 392-438 211-260 (326)
43 PRK15383 type III secretion sy 59.1 7.4 0.00016 40.9 2.7 47 392-438 219-268 (335)
44 TIGR03469 HonB hopene-associat 58.7 72 0.0016 34.9 10.4 102 302-411 39-154 (384)
45 cd06427 CESA_like_2 CESA_like_ 56.7 53 0.0012 32.7 8.4 83 320-407 15-100 (241)
46 cd04185 GT_2_like_b Subfamily 56.5 32 0.0007 32.8 6.6 82 321-407 12-95 (202)
47 PRK10063 putative glycosyl tra 55.4 68 0.0015 32.9 9.1 92 305-408 3-99 (248)
48 PRK11498 bcsA cellulose syntha 55.0 59 0.0013 40.0 9.7 82 331-421 287-374 (852)
49 cd04195 GT2_AmsE_like GT2_AmsE 54.1 82 0.0018 29.8 8.9 79 320-407 14-96 (201)
50 PRK11204 N-glycosyltransferase 52.7 54 0.0012 35.8 8.3 108 302-421 53-169 (420)
51 cd02520 Glucosylceramide_synth 52.1 28 0.0006 33.6 5.3 81 321-407 16-102 (196)
52 cd04192 GT_2_like_e Subfamily 50.8 59 0.0013 31.2 7.4 20 388-407 79-98 (229)
53 cd06438 EpsO_like EpsO protein 50.7 94 0.002 29.5 8.7 83 320-407 11-97 (183)
54 PF03314 DUF273: Protein of un 50.7 44 0.00095 34.6 6.6 79 389-467 39-126 (222)
55 COG0463 WcaA Glycosyltransfera 50.5 1E+02 0.0022 27.0 8.2 85 317-408 14-99 (291)
56 cd06421 CESA_CelA_like CESA_Ce 49.9 1.4E+02 0.0031 28.8 10.0 81 321-407 17-100 (234)
57 cd02511 Beta4Glucosyltransfera 49.2 78 0.0017 31.5 8.2 73 321-407 15-87 (229)
58 cd04196 GT_2_like_d Subfamily 48.5 89 0.0019 29.6 8.1 88 321-414 13-103 (214)
59 cd06434 GT2_HAS Hyaluronan syn 46.9 1.1E+02 0.0025 29.7 8.8 92 319-421 14-111 (235)
60 cd02522 GT_2_like_a GT_2_like_ 46.3 1.1E+02 0.0023 29.5 8.4 75 320-407 13-88 (221)
61 cd02510 pp-GalNAc-T pp-GalNAc- 46.1 87 0.0019 32.5 8.2 86 319-412 12-105 (299)
62 PF04488 Gly_transf_sug: Glyco 46.0 11 0.00023 33.6 1.3 88 322-413 5-98 (103)
63 PF10111 Glyco_tranf_2_2: Glyc 45.4 80 0.0017 32.9 7.8 88 319-413 17-111 (281)
64 cd02514 GT13_GLCNAC-TI GT13_GL 45.1 1.3E+02 0.0029 33.0 9.6 95 317-412 11-118 (334)
65 cd06913 beta3GnTL1_like Beta 1 44.6 1.3E+02 0.0029 29.2 8.8 28 380-407 73-100 (219)
66 cd06442 DPM1_like DPM1_like re 44.5 53 0.0011 31.7 6.0 79 321-407 12-94 (224)
67 cd06420 GT2_Chondriotin_Pol_N 40.8 1E+02 0.0022 28.6 7.1 79 321-407 12-95 (182)
68 PLN02726 dolichyl-phosphate be 39.8 1.9E+02 0.0041 28.9 9.3 25 388-412 90-115 (243)
69 PF03414 Glyco_transf_6: Glyco 39.5 1.1E+02 0.0025 33.7 8.0 167 303-479 99-311 (337)
70 TIGR03472 HpnI hopanoid biosyn 38.1 62 0.0013 35.2 5.9 21 387-407 122-142 (373)
71 PRK14583 hmsR N-glycosyltransf 35.8 1.7E+02 0.0037 32.7 9.0 93 303-407 75-171 (444)
72 PF05704 Caps_synth: Capsular 35.0 92 0.002 33.1 6.4 128 301-449 43-187 (276)
73 KOG1950 Glycosyl transferase, 33.4 18 0.00038 39.7 0.8 37 380-416 113-149 (369)
74 cd04184 GT2_RfbC_Mx_like Myxoc 32.8 2.3E+02 0.005 26.7 8.2 23 385-407 77-99 (202)
75 PRK10073 putative glycosyl tra 31.7 1.5E+02 0.0032 31.9 7.4 91 304-407 7-101 (328)
76 COG0144 Sun tRNA and rRNA cyto 31.6 81 0.0018 34.6 5.5 62 195-260 229-306 (355)
77 PRK13915 putative glucosyl-3-p 31.5 2E+02 0.0044 30.7 8.4 77 322-403 47-127 (306)
78 PRK10714 undecaprenyl phosphat 31.2 3.5E+02 0.0076 29.1 10.1 90 306-404 9-103 (325)
79 TIGR03111 glyc2_xrt_Gpos1 puta 29.8 1.7E+02 0.0037 32.7 7.7 95 302-407 48-147 (439)
80 cd04187 DPM1_like_bac Bacteria 29.6 3.5E+02 0.0077 25.2 8.9 24 390-413 79-103 (181)
81 cd04179 DPM_DPG-synthase_like 29.6 1.2E+02 0.0026 28.1 5.6 88 320-413 11-102 (185)
82 cd06435 CESA_NdvC_like NdvC_li 29.2 2.6E+02 0.0057 27.2 8.2 17 391-407 84-100 (236)
83 cd04191 Glucan_BSP_ModH Glucan 29.0 3.6E+02 0.0077 28.0 9.4 39 390-428 94-137 (254)
84 PF13704 Glyco_tranf_2_4: Glyc 28.7 1.5E+02 0.0032 25.3 5.7 70 334-408 18-88 (97)
85 PF03452 Anp1: Anp1; InterPro 27.4 4E+02 0.0086 28.6 9.5 42 300-343 22-65 (269)
86 PRK11933 yebU rRNA (cytosine-C 27.0 1E+02 0.0022 35.4 5.4 61 195-260 183-260 (470)
87 PF02485 Branch: Core-2/I-Bran 26.5 2.1E+02 0.0045 28.9 7.1 102 305-413 1-110 (244)
88 PF01793 Glyco_transf_15: Glyc 23.7 2.1E+02 0.0045 31.5 6.8 107 301-409 53-192 (328)
89 cd02526 GT2_RfbF_like RfbF is 23.0 2.6E+02 0.0056 27.2 6.8 21 391-411 75-96 (237)
90 PRK05454 glucosyltransferase M 22.4 3.8E+02 0.0083 32.3 9.2 112 302-420 123-254 (691)
91 TIGR00446 nop2p NOL1/NOP2/sun 22.2 1.6E+02 0.0034 30.7 5.3 19 195-213 140-158 (264)
No 1
>PLN00176 galactinol synthase
Probab=100.00 E-value=3e-45 Score=386.57 Aligned_cols=235 Identities=29% Similarity=0.508 Sum_probs=195.2
Q ss_pred CCCCEEEEEEeecCcchHHHHHHHHHHHHHhCCCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEeeccCCccccc---ccc
Q 006648 301 SVHREAYATILHSAHVYVCGAIAAAQSIRMSGSTRDLVILVDETISAYHRSGLEAAGWKVRTIQRIRNPKAEKD---AYN 377 (637)
Q Consensus 301 ~~~R~AYVTlLtsdd~YL~gAiVL~~SLr~~ns~~dlVILvtd~ISee~r~~Lk~~g~~V~~I~~I~~P~~~~~---~~~ 377 (637)
..+++||||+|+++++|++||++|++||+++++.+++|||+++++++++++.|++.|+.|+.|+++..+..... .+.
T Consensus 19 ~~~~~AyVT~L~~n~~Y~~Ga~vL~~SLr~~~s~~~lVvlVt~dVp~e~r~~L~~~g~~V~~V~~i~~~~~~~~~~~~~~ 98 (333)
T PLN00176 19 KPAKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAVLPDVPEEHRRILVSQGCIVREIEPVYPPENQTQFAMAYY 98 (333)
T ss_pred ccCceEEEEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCcccccccccchh
Confidence 46789999999988999999999999999999999999999999999999999999999999988865543211 223
Q ss_pred chhHHHHHHcccCCCceEEEecccccccCCchhhhCCCC--eeeecC---------------------------------
Q 006648 378 EWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPE--ISATGN--------------------------------- 422 (637)
Q Consensus 378 ~~tysKL~Iw~LtdYDRVLYLDAD~LVL~nLDeLFdlp~--IaAv~D--------------------------------- 422 (637)
..+|+||++|++++||||||||||+||++|||+||+++. ++|+.+
T Consensus 99 ~i~~tKl~iw~l~~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~wp~~~g~ 178 (333)
T PLN00176 99 VINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTWPAELGP 178 (333)
T ss_pred hhhhhhhhhccccccceEEEecCCEEeecChHHHhcCCCcceEEEecccccccccccccccccccccchhhccchhhccC
Confidence 458999999999999999999999999999999999974 666543
Q ss_pred -CCCcccceEEEEecCHHHHHHHHHHHHhcCCCCCCChhHHHHhcc-cceecCCccCccccccCCChHHHHhhhhcccCC
Q 006648 423 -NGTMFNSGVMVIEPSSCTFQLLMDHINEFESYNGGDQGYLNEVFT-WWHRIPKHMNFLKHFWFGDEEEVKQKKTRLFGA 500 (637)
Q Consensus 423 -~~~yFNSGVMVInPs~~~fe~L~e~l~~~~sy~~~DQdiLN~vF~-~w~~LP~rYN~l~~~w~~~~~~~~~~k~e~f~~ 500 (637)
...|||||||||+|+.+++++|++.+.....+.|+|||+||.+|. +|++||.+||++........ +.++
T Consensus 179 ~~~~yFNSGVlvinps~~~~~~ll~~l~~~~~~~f~DQD~LN~~F~~~~~~Lp~~YN~~~~~~~~~~--------~~~~- 249 (333)
T PLN00176 179 PPPLYFNAGMFVFEPSLSTYEDLLETLKITPPTPFAEQDFLNMFFRDIYKPIPPVYNLVLAMLWRHP--------ENVE- 249 (333)
T ss_pred CCCCeEEeEEEEEEcCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHcCcEEECCchhcCchhhhhhCh--------hhcc-
Confidence 124999999999999999999999987665678999999999999 89999999999875422111 1232
Q ss_pred CCCCeEEEEecC--CCCCCCCCCCCCCccccccccccchhHHhhHHHHHhhcH
Q 006648 501 DPPILYVLHYLG--MKPWLCFRDYDCNWNVDIFQEFASDVAHAKWWRVHDAMP 551 (637)
Q Consensus 501 ~~~~~kIIHF~G--~KPW~~~~~ydcnWn~~~~~~~~sd~~h~~WW~vyd~mp 551 (637)
.++++||||+| .|||+.. ...+|++.++. ..++++||++|++.-
T Consensus 250 -~~~vkIIHY~~~~~KPW~~~-~~~~~~~~~~~-----~~~~~~Ww~~~~~~~ 295 (333)
T PLN00176 250 -LDKVKVVHYCAAGSKPWRYT-GKEENMDREDI-----KMLVKKWWDIYNDES 295 (333)
T ss_pred -cCCcEEEEeeCCCCCCCCCC-CcccCCChHHH-----HHHHHHHHHHhcccc
Confidence 35799999996 7999954 45667665433 357899999999854
No 2
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=100.00 E-value=5.5e-40 Score=331.68 Aligned_cols=230 Identities=41% Similarity=0.729 Sum_probs=192.7
Q ss_pred EEEEEEeecCcchHHHHHHHHHHHHHhCCCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEeeccCCccc---cccccchhH
Q 006648 305 EAYATILHSAHVYVCGAIAAAQSIRMSGSTRDLVILVDETISAYHRSGLEAAGWKVRTIQRIRNPKAE---KDAYNEWNY 381 (637)
Q Consensus 305 ~AYVTlLtsdd~YL~gAiVL~~SLr~~ns~~dlVILvtd~ISee~r~~Lk~~g~~V~~I~~I~~P~~~---~~~~~~~ty 381 (637)
.||||+++ +++|+++|.|+++||++++++++++|+++++++++.++.|++.+.+++.++.+..+... ...+...+|
T Consensus 1 ~ay~t~~~-~~~Y~~~a~vl~~SL~~~~~~~~~~vl~~~~is~~~~~~L~~~~~~~~~v~~i~~~~~~~~~~~~~~~~~~ 79 (240)
T cd02537 1 EAYVTLLT-NDDYLPGALVLGYSLRKVGSSYDLVVLVTPGVSEESREALEEVGWIVREVEPIDPPDSANLLKRPRFKDTY 79 (240)
T ss_pred CEEEEEec-ChhHHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHcCCEEEecCccCCcchhhhccchHHHHHh
Confidence 49999987 57999999999999999999999999999999999999999999999988887655432 123445689
Q ss_pred HHHHHcccCCCceEEEecccccccCCchhhhCCC-CeeeecCCC--CcccceEEEEecCHHHHHHHHHHHHhcCCCCCCC
Q 006648 382 SKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMP-EISATGNNG--TMFNSGVMVIEPSSCTFQLLMDHINEFESYNGGD 458 (637)
Q Consensus 382 sKL~Iw~LtdYDRVLYLDAD~LVL~nLDeLFdlp-~IaAv~D~~--~yFNSGVMVInPs~~~fe~L~e~l~~~~sy~~~D 458 (637)
+||++|++++||||||||+|+||++||++||+++ .++|+.+.. .|||||||+++|+...++++++.+.+...+.++|
T Consensus 80 ~kl~~~~l~~~drvlylD~D~~v~~~i~~Lf~~~~~~~a~~d~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~D 159 (240)
T cd02537 80 TKLRLWNLTEYDKVVFLDADTLVLRNIDELFDLPGEFAAAPDCGWPDLFNSGVFVLKPSEETFNDLLDALQDTPSFDGGD 159 (240)
T ss_pred HHHHhccccccceEEEEeCCeeEccCHHHHhCCCCceeeecccCccccccceEEEEcCCHHHHHHHHHHHhccCCCCCCC
Confidence 9999999999999999999999999999999994 588887753 7999999999999999999999998766688899
Q ss_pred hhHHHHhcc-c--ceecCCccCccccccCCChHHHHhhhhcccCCCCCCeEEEEecC-CCCCCCCCCCCCCccccccccc
Q 006648 459 QGYLNEVFT-W--WHRIPKHMNFLKHFWFGDEEEVKQKKTRLFGADPPILYVLHYLG-MKPWLCFRDYDCNWNVDIFQEF 534 (637)
Q Consensus 459 QdiLN~vF~-~--w~~LP~rYN~l~~~w~~~~~~~~~~k~e~f~~~~~~~kIIHF~G-~KPW~~~~~ydcnWn~~~~~~~ 534 (637)
|++||.+|. + |..||.+||++...+....+ .. ...++++||||+| .|||+....+.+++ ..
T Consensus 160 QdiLN~~~~~~~~~~~l~~~yN~~~~~~~~~~~-------~~--~~~~~~~iiHf~g~~KPW~~~~~~~~~~------~~ 224 (240)
T cd02537 160 QGLLNSYFSDRGIWKRLPFTYNALKPLRYLHPE-------AL--WFGDEIKVVHFIGGDKPWSWWRDPETKE------KD 224 (240)
T ss_pred HHHHHHHHcCCCCEeECCcceeeehhhhccCch-------hh--cccCCcEEEEEeCCCCCCCCCcCCCccc------cc
Confidence 999999998 7 99999999998765322111 01 1235799999999 99999877654332 23
Q ss_pred cchhHHhhHHHHHhhc
Q 006648 535 ASDVAHAKWWRVHDAM 550 (637)
Q Consensus 535 ~sd~~h~~WW~vyd~m 550 (637)
..+..+..||++|++|
T Consensus 225 ~~~~~~~~w~~~~~~~ 240 (240)
T cd02537 225 DYNELHQWWWDIYDEL 240 (240)
T ss_pred chHHHHHHHHHHHhhC
Confidence 4567899999999876
No 3
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=100.00 E-value=1.8e-36 Score=313.46 Aligned_cols=242 Identities=25% Similarity=0.252 Sum_probs=178.2
Q ss_pred EEEEEEeecCcchHHHHHHHHHHHHHhCCCCcEEEEEcCCCCHHHHH-------HHHHcCCEEEEEeeccCCcccccccc
Q 006648 305 EAYATILHSAHVYVCGAIAAAQSIRMSGSTRDLVILVDETISAYHRS-------GLEAAGWKVRTIQRIRNPKAEKDAYN 377 (637)
Q Consensus 305 ~AYVTlLtsdd~YL~gAiVL~~SLr~~ns~~dlVILvtd~ISee~r~-------~Lk~~g~~V~~I~~I~~P~~~~~~~~ 377 (637)
+||||++| ++.|+|||+++++||+++++.+|+|+|++++++..... .+...++.+..|+.+..+.. ...+
T Consensus 1 fAYvtl~T-n~~YL~gAlvL~~sLr~~gs~~dlVvLvt~~~~~~~~~~~~~~~~~l~~~~~~v~~v~~~~~~~~-~~~~- 77 (278)
T cd06914 1 YAYVNYAT-NADYLCNALILFEQLRRLGSKAKLVLLVPETLLDRNLDDFVRRDLLLARDKVIVKLIPVIIASGG-DAYW- 77 (278)
T ss_pred CeEEEEec-ChhHHHHHHHHHHHHHHhCCCCCEEEEECCCCChhhhhhHHHHHHHhhccCcEEEEcCcccCCCC-CccH-
Confidence 59999998 68999999999999999999999999999999865432 23445777777765544431 1122
Q ss_pred chhHHHHHHcccCCCceEEEecccccccCCchhhhCCC-C-eeeecCCCCcccceEEEEecCHHHHHHHHHHHHhcCC--
Q 006648 378 EWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMP-E-ISATGNNGTMFNSGVMVIEPSSCTFQLLMDHINEFES-- 453 (637)
Q Consensus 378 ~~tysKL~Iw~LtdYDRVLYLDAD~LVL~nLDeLFdlp-~-IaAv~D~~~yFNSGVMVInPs~~~fe~L~e~l~~~~s-- 453 (637)
..+|+||++|++++||||||||||+||++|||+||+++ . ..|+++...|||||||||+|+.++|++|++.+.+..+
T Consensus 78 ~~~~tKl~~~~l~~y~kvlyLDaD~l~~~~ideLf~~~~~~~~Aap~~~~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~ 157 (278)
T cd06914 78 AKSLTKLRAFNQTEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAPRAYWKFASHLMVIKPSKEAFKELMTEILPAYLNK 157 (278)
T ss_pred HHHHHHHHhccccceeeEEEecCChhhhcChHHHhcCCcccceeeecCcceecceeEEEeCCHHHHHHHHHHHHHhcccC
Confidence 23699999999999999999999999999999999998 2 2344444559999999999999999999999876432
Q ss_pred CCCCChhHHHHhcc-c-------ceecCCc-cCccccccCCChHH-HHh---hhhcccCCC--CCCeEEEEecC---CCC
Q 006648 454 YNGGDQGYLNEVFT-W-------WHRIPKH-MNFLKHFWFGDEEE-VKQ---KKTRLFGAD--PPILYVLHYLG---MKP 515 (637)
Q Consensus 454 y~~~DQdiLN~vF~-~-------w~~LP~r-YN~l~~~w~~~~~~-~~~---~k~e~f~~~--~~~~kIIHF~G---~KP 515 (637)
..++|||+||.+|. + +..||.+ ||++.+..+..... .-+ ...+.|+++ .+++++|||++ .||
T Consensus 158 ~~~~DQdiLN~~~~~~~~~~~~~~~~Lp~~~y~llt~~~r~~~~~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KP 237 (278)
T cd06914 158 KNEYDMDLINEEFYNSKQLFKPSVLVLPHRQYGLLTGEFREKLHKSFLSNAQHLYEKWDPDDVFKESKVIHFSDSPLPKP 237 (278)
T ss_pred CCCCChHHHHHHHhCCccccCcceEEcCccccccCChhhcccCHHHhhccccccccccCHHHHHhhCeEEEecCCCCCCC
Confidence 36789999999999 7 8899996 99998754332211 101 123444432 36899999998 699
Q ss_pred CCCCCC-------CCCCccccccccccchhHHhhHHHHHhhc
Q 006648 516 WLCFRD-------YDCNWNVDIFQEFASDVAHAKWWRVHDAM 550 (637)
Q Consensus 516 W~~~~~-------ydcnWn~~~~~~~~sd~~h~~WW~vyd~m 550 (637)
|...+. ..|--+.+ -+.-..+..++.|+..|+++
T Consensus 238 W~~~~~~~~~~~~~~~~~~~~-~~~~~~c~~~~iW~~~y~~f 278 (278)
T cd06914 238 WNYNNLEDIYCIEKIYCKMVK-PRLEDDCRACDLWNSLYADF 278 (278)
T ss_pred cCCcCHHHHHHhCCccccCCC-CCccCcchHHHHHHHHhhcC
Confidence 997542 11100001 01112345789999999864
No 4
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=99.97 E-value=2.4e-31 Score=268.56 Aligned_cols=202 Identities=27% Similarity=0.416 Sum_probs=149.5
Q ss_pred EEEEEeecCcchHHHHHHHHHHHHHhCCC-CcEEEEEcCCCCHHHHHHHHHc----CC--EEEEEeeccCCcc-c-cccc
Q 006648 306 AYATILHSAHVYVCGAIAAAQSIRMSGST-RDLVILVDETISAYHRSGLEAA----GW--KVRTIQRIRNPKA-E-KDAY 376 (637)
Q Consensus 306 AYVTlLtsdd~YL~gAiVL~~SLr~~ns~-~dlVILvtd~ISee~r~~Lk~~----g~--~V~~I~~I~~P~~-~-~~~~ 376 (637)
++|++. +|++|++++.|+++||++++++ ..++|+. ++++++.++.|++. +. ++++++....... . ...+
T Consensus 2 ~i~~~a-~d~~y~~~~~v~i~Sl~~~~~~~~~~~il~-~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 79 (246)
T cd00505 2 AIVIVA-TGDEYLRGAIVLMKSVLRHRTKPLRFHVLT-NPLSDTFKAALDNLRKLYNFNYELIPVDILDSVDSEHLKRPI 79 (246)
T ss_pred eEEEEe-cCcchhHHHHHHHHHHHHhCCCCeEEEEEE-ccccHHHHHHHHHHHhccCceEEEEeccccCcchhhhhcCcc
Confidence 567754 4679999999999999998874 4455554 67999999888764 22 3333332111100 1 1234
Q ss_pred cchhHHHHHHcccCC-CceEEEecccccccCCchhhhCCC----CeeeecC------------------CCCcccceEEE
Q 006648 377 NEWNYSKFRLWQLTD-YDKIIFIDADLLILRNIDFLFGMP----EISATGN------------------NGTMFNSGVMV 433 (637)
Q Consensus 377 ~~~tysKL~Iw~Ltd-YDRVLYLDAD~LVL~nLDeLFdlp----~IaAv~D------------------~~~yFNSGVMV 433 (637)
+..+|+||+++++.+ |+||||||+|+||++||++||+++ .+||+++ ...||||||||
T Consensus 80 ~~~~y~RL~i~~llp~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~~yfNsGVml 159 (246)
T cd00505 80 KIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRREGKYYRQKRSHLAGPDYFNSGVFV 159 (246)
T ss_pred ccceeHHHHHHHHhhccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhccchhhcccCCCCCCCceeeeeEE
Confidence 567899999999865 999999999999999999999987 2667654 13599999999
Q ss_pred EecCHHHHHHHHHHHHh-----cCCCCCCChhHHHHhcc-c---ceecCCccCccccccCCChHHHHhhhhcccCCCCCC
Q 006648 434 IEPSSCTFQLLMDHINE-----FESYNGGDQGYLNEVFT-W---WHRIPKHMNFLKHFWFGDEEEVKQKKTRLFGADPPI 504 (637)
Q Consensus 434 InPs~~~fe~L~e~l~~-----~~sy~~~DQdiLN~vF~-~---w~~LP~rYN~l~~~w~~~~~~~~~~k~e~f~~~~~~ 504 (637)
|+++.++++++++...+ ...+.++|||+||.+|. + +..||.+||++........ +.+.+...+
T Consensus 160 inl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~~~~i~~L~~~wN~~~~~~~~~~--------~~~~~~~~~ 231 (246)
T cd00505 160 VNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQVPFIVKSLPCIWNVRLTGCYRSL--------NCFKAFVKN 231 (246)
T ss_pred EechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhcCCCeEEECCCeeeEEecCccccc--------cchhhhcCC
Confidence 99999988877665422 34577899999999999 5 9999999999875422111 111223457
Q ss_pred eEEEEecC-CCCCC
Q 006648 505 LYVLHYLG-MKPWL 517 (637)
Q Consensus 505 ~kIIHF~G-~KPW~ 517 (637)
++||||+| .|||+
T Consensus 232 ~~iiHy~g~~KPW~ 245 (246)
T cd00505 232 AKVIHFNGPTKPWN 245 (246)
T ss_pred CEEEEeCCCCCCCC
Confidence 99999999 89996
No 5
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=99.97 E-value=2.2e-30 Score=260.72 Aligned_cols=202 Identities=26% Similarity=0.406 Sum_probs=147.6
Q ss_pred ecCcchHHHHHHHHHHHHHhCC--CCcEEEEEcCCCCHHHHHHHHHc----CCEEEEEeeccCCcc-----ccccccchh
Q 006648 312 HSAHVYVCGAIAAAQSIRMSGS--TRDLVILVDETISAYHRSGLEAA----GWKVRTIQRIRNPKA-----EKDAYNEWN 380 (637)
Q Consensus 312 tsdd~YL~gAiVL~~SLr~~ns--~~dlVILvtd~ISee~r~~Lk~~----g~~V~~I~~I~~P~~-----~~~~~~~~t 380 (637)
+.|++|+.++.|++.||+++++ .++|+|++ ++++++.++.|++. +..+..+. +..+.. ....++..+
T Consensus 6 ~~d~~y~~~~~~~l~Sl~~~~~~~~~~~~il~-~~is~~~~~~L~~~~~~~~~~i~~~~-i~~~~~~~~~~~~~~~~~~~ 83 (248)
T cd04194 6 AIDDNYAPYLAVTIKSILANNSKRDYDFYILN-DDISEENKKKLKELLKKYNSSIEFIK-IDNDDFKFFPATTDHISYAT 83 (248)
T ss_pred EecHhhHHHHHHHHHHHHhcCCCCceEEEEEe-CCCCHHHHHHHHHHHHhcCCeEEEEE-cCHHHHhcCCcccccccHHH
Confidence 4488999999999999999988 45666665 57999999999876 44443322 222111 123345568
Q ss_pred HHHHHHcccC-CCceEEEecccccccCCchhhhCCCC----eeeecC-----------------CCCcccceEEEEecCH
Q 006648 381 YSKFRLWQLT-DYDKIIFIDADLLILRNIDFLFGMPE----ISATGN-----------------NGTMFNSGVMVIEPSS 438 (637)
Q Consensus 381 ysKL~Iw~Lt-dYDRVLYLDAD~LVL~nLDeLFdlp~----IaAv~D-----------------~~~yFNSGVMVInPs~ 438 (637)
|+||+++++. +|+||||||+|+||++||++||+++. ++|+++ ...||||||||++++.
T Consensus 84 y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~~~~~~~~~~~~~yfNsGv~l~nl~~ 163 (248)
T cd04194 84 YYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKKRKRRLGGYDDGSYFNSGVLLINLKK 163 (248)
T ss_pred HHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHHHHhhcCCCcccceeeecchheeHHH
Confidence 9999999985 59999999999999999999999862 666653 2469999999999987
Q ss_pred HHHH----HHHHHHHhc-CCCCCCChhHHHHhcc-cceecCCccCccccccCCChHHHHhhhhcccCCCCCCeEEEEecC
Q 006648 439 CTFQ----LLMDHINEF-ESYNGGDQGYLNEVFT-WWHRIPKHMNFLKHFWFGDEEEVKQKKTRLFGADPPILYVLHYLG 512 (637)
Q Consensus 439 ~~fe----~L~e~l~~~-~sy~~~DQdiLN~vF~-~w~~LP~rYN~l~~~w~~~~~~~~~~k~e~f~~~~~~~kIIHF~G 512 (637)
++.+ ++++.+.+. ..+.++||++||.+|. +|+.||.+||++........... ...+.+....++++||||+|
T Consensus 164 ~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~~~~L~~~~N~~~~~~~~~~~~~--~~~~~~~~~~~~~~iiHf~g 241 (248)
T cd04194 164 WREENITEKLLELIKEYGGRLIYPDQDILNAVLKDKILYLPPRYNFQTGFYYLLKKKS--KEEQELEEARKNPVIIHYTG 241 (248)
T ss_pred HHHhhhHHHHHHHHHhCCCceeeCChHHHHHHHhCCeEEcCcccccchhHhHHhhccc--hhHHHHHHHhcCCEEEEeCC
Confidence 7655 445555443 3477899999999999 79999999999876432111000 00011222356899999999
Q ss_pred -CCCCC
Q 006648 513 -MKPWL 517 (637)
Q Consensus 513 -~KPW~ 517 (637)
.|||+
T Consensus 242 ~~KPW~ 247 (248)
T cd04194 242 SDKPWN 247 (248)
T ss_pred CCCCCC
Confidence 99997
No 6
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=99.97 E-value=1.6e-30 Score=255.79 Aligned_cols=201 Identities=27% Similarity=0.416 Sum_probs=142.0
Q ss_pred eecCcchHHHHHHHHHHHHHhCCC-CcE-EEEEcCCCCHHHHHHHHHcCCEEEEEeeccCCc-----------ccccccc
Q 006648 311 LHSAHVYVCGAIAAAQSIRMSGST-RDL-VILVDETISAYHRSGLEAAGWKVRTIQRIRNPK-----------AEKDAYN 377 (637)
Q Consensus 311 Ltsdd~YL~gAiVL~~SLr~~ns~-~dl-VILvtd~ISee~r~~Lk~~g~~V~~I~~I~~P~-----------~~~~~~~ 377 (637)
++.|++|+++++|+++||++++++ .++ +++++++++++.++.|++.+.++..+..+..+. .....+.
T Consensus 4 ~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (250)
T PF01501_consen 4 LACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSPSKRHFS 83 (250)
T ss_dssp EECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSGGHHH--TTS-HCCTCGG
T ss_pred EEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccccceeeeccchHHhhhhhhhccccccccc
Confidence 445789999999999999999985 555 555778999999999988876654332221111 1112334
Q ss_pred chhHHHHHHccc-CCCceEEEecccccccCCchhhhCCCC----eeeecC--------------------CCCcccceEE
Q 006648 378 EWNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFGMPE----ISATGN--------------------NGTMFNSGVM 432 (637)
Q Consensus 378 ~~tysKL~Iw~L-tdYDRVLYLDAD~LVL~nLDeLFdlp~----IaAv~D--------------------~~~yFNSGVM 432 (637)
..+|.||+++++ ++||||||||+|+||++||++||+++. ++|+.+ ...+||||||
T Consensus 84 ~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~fNsGv~ 163 (250)
T PF01501_consen 84 PATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFDNFPNKRFPFSERKQPGNKPYFNSGVM 163 (250)
T ss_dssp GGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----HHHHTSTTSSEEECESTTTTSEEEEEE
T ss_pred HHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhhhhhhcccchhhcccCcccccccCcEE
Confidence 568999999999 999999999999999999999999762 555533 4589999999
Q ss_pred EEecCHHHHHHHHHHHHh-----cCCCCCCChhHHHHhcc-cceecCCccCccccccCCChHHHHhhhhcccCCCCCCeE
Q 006648 433 VIEPSSCTFQLLMDHINE-----FESYNGGDQGYLNEVFT-WWHRIPKHMNFLKHFWFGDEEEVKQKKTRLFGADPPILY 506 (637)
Q Consensus 433 VInPs~~~fe~L~e~l~~-----~~sy~~~DQdiLN~vF~-~w~~LP~rYN~l~~~w~~~~~~~~~~k~e~f~~~~~~~k 506 (637)
+++++..+++.+.+.+.+ ...+.++||++||.+|. .+..||.+||++........ ..+.....+++
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~~~~~~L~~~~N~~~~~~~~~~--------~~~~~~~~~~~ 235 (250)
T PF01501_consen 164 LFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFYGNIKPLPCRYNCQPSWYNQSD--------DYFNPILEDAK 235 (250)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHTTGEEEEEGGGSEEHHHHHHTH--------HHHHHHGCC-S
T ss_pred EEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhccceeEEECchhccccccccccc--------hhhHhhcCCeE
Confidence 999999888877665532 23467899999999999 89999999999876541000 00111134689
Q ss_pred EEEecC-CCCCCCC
Q 006648 507 VLHYLG-MKPWLCF 519 (637)
Q Consensus 507 IIHF~G-~KPW~~~ 519 (637)
||||+| .|||...
T Consensus 236 iiHy~g~~KPW~~~ 249 (250)
T PF01501_consen 236 IIHYSGPPKPWKST 249 (250)
T ss_dssp EEE--SSS-TTSTT
T ss_pred EEEeCCCCcCCCCC
Confidence 999999 9999853
No 7
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=99.96 E-value=1e-28 Score=261.76 Aligned_cols=217 Identities=18% Similarity=0.297 Sum_probs=155.7
Q ss_pred eecCcchHHHHHHHHHHHHHhCCCC--cEEEEEcCCCCHHHHHHHHHc----CCEEEEEeeccCC----ccccccccchh
Q 006648 311 LHSAHVYVCGAIAAAQSIRMSGSTR--DLVILVDETISAYHRSGLEAA----GWKVRTIQRIRNP----KAEKDAYNEWN 380 (637)
Q Consensus 311 Ltsdd~YL~gAiVL~~SLr~~ns~~--dlVILvtd~ISee~r~~Lk~~----g~~V~~I~~I~~P----~~~~~~~~~~t 380 (637)
++.|++|+.++.|++.||..++++. +++|+ ++++|++.++.|++. +.++..+. +... ......++..+
T Consensus 30 ~~~D~ny~~~~~vsi~Sil~nn~~~~~~f~Il-~~~is~e~~~~l~~l~~~~~~~i~~~~-id~~~~~~~~~~~~~s~at 107 (334)
T PRK15171 30 YGIDKNFLFGCGVSIASVLLNNPDKSLVFHVF-TDYISDADKQRFSALAKQYNTRINIYL-INCERLKSLPSTKNWTYAT 107 (334)
T ss_pred EECcHhhHHHHHHHHHHHHHhCCCCCEEEEEE-eCCCCHHHHHHHHHHHHhcCCeEEEEE-eCHHHHhCCcccCcCCHHH
Confidence 4558999999999999999988764 45665 478999998877653 44443222 1110 01123456679
Q ss_pred HHHHHHccc-C-CCceEEEecccccccCCchhhhCCCC----eeeec-C------------------CCCcccceEEEEe
Q 006648 381 YSKFRLWQL-T-DYDKIIFIDADLLILRNIDFLFGMPE----ISATG-N------------------NGTMFNSGVMVIE 435 (637)
Q Consensus 381 ysKL~Iw~L-t-dYDRVLYLDAD~LVL~nLDeLFdlp~----IaAv~-D------------------~~~yFNSGVMVIn 435 (637)
|+||+++++ + ++|||||||+|+||.+||++||+++. ++|+. + ...||||||||||
T Consensus 108 Y~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~~~~~~~~~l~~~~~~~~YFNsGVlliN 187 (334)
T PRK15171 108 YFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAEWWSKRAQSLQTPGLASGYFNSGFLLIN 187 (334)
T ss_pred HHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchhHHHHHHHhcCCccccccceecceEEEc
Confidence 999999997 3 69999999999999999999999862 56552 1 1259999999999
Q ss_pred cCHHHHHHH----HHHHHhc---CCCCCCChhHHHHhcc-cceecCCccCccccccCCChHHHHhhhhcccCCCCCCeEE
Q 006648 436 PSSCTFQLL----MDHINEF---ESYNGGDQGYLNEVFT-WWHRIPKHMNFLKHFWFGDEEEVKQKKTRLFGADPPILYV 507 (637)
Q Consensus 436 Ps~~~fe~L----~e~l~~~---~sy~~~DQdiLN~vF~-~w~~LP~rYN~l~~~w~~~~~~~~~~k~e~f~~~~~~~kI 507 (637)
++.++.+.+ ++.+.+. ..+.++|||+||.+|. +|..||.+||++.+... +.. .........+++|
T Consensus 188 l~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~~~~~L~~~wN~~~~~~~----~~~---~~~~~~~~~~p~I 260 (334)
T PRK15171 188 IPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAGKVKFIDAKYNTQFSLNY----ELK---DSVINPVNDETVF 260 (334)
T ss_pred HHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcCCeEECCHhhCCccchhH----HHH---hcccccccCCCEE
Confidence 988776655 4444432 3567899999999999 89999999998764311 100 0111122347899
Q ss_pred EEecC-CCCCCCCCCCCCCccccccccccchhHHhhHHHHHhhcH
Q 006648 508 LHYLG-MKPWLCFRDYDCNWNVDIFQEFASDVAHAKWWRVHDAMP 551 (637)
Q Consensus 508 IHF~G-~KPW~~~~~ydcnWn~~~~~~~~sd~~h~~WW~vyd~mp 551 (637)
|||+| .|||+.+..+ ...+.||+++.+.|
T Consensus 261 IHy~G~~KPW~~~~~~---------------~~~~~f~~~~~~sp 290 (334)
T PRK15171 261 IHYIGPTKPWHSWADY---------------PVSQYFLKAKEASP 290 (334)
T ss_pred EEECCCCCCCCCCCCC---------------chHHHHHHHHhcCC
Confidence 99999 9999854322 23589999999876
No 8
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.94 E-value=1.1e-26 Score=238.39 Aligned_cols=204 Identities=18% Similarity=0.163 Sum_probs=139.8
Q ss_pred chHHHHHHHHHHHHHhCCC-CcEEE-EEcCCCCHHHHHHHHHc----CCE--EEEEeecc---CCc--------------
Q 006648 316 VYVCGAIAAAQSIRMSGST-RDLVI-LVDETISAYHRSGLEAA----GWK--VRTIQRIR---NPK-------------- 370 (637)
Q Consensus 316 ~YL~gAiVL~~SLr~~ns~-~dlVI-Lvtd~ISee~r~~Lk~~----g~~--V~~I~~I~---~P~-------------- 370 (637)
+|+. +.+++.|+..++++ .++++ +++++++.+..+.+.+. +.+ ++.++... ...
T Consensus 9 n~l~-~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 87 (257)
T cd06429 9 NRLA-AAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSLMQLESEADTS 87 (257)
T ss_pred chhH-HHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchhhhhhcccccc
Confidence 8995 44555566666644 55432 35788998887777543 333 33332210 000
Q ss_pred ----cccccccchhHHHHHHccc-CCCceEEEecccccccCCchhhhCCCC----eeeecCCCCcccceEEEEecCHHHH
Q 006648 371 ----AEKDAYNEWNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFGMPE----ISATGNNGTMFNSGVMVIEPSSCTF 441 (637)
Q Consensus 371 ----~~~~~~~~~tysKL~Iw~L-tdYDRVLYLDAD~LVL~nLDeLFdlp~----IaAv~D~~~yFNSGVMVInPs~~~f 441 (637)
.....++..+|+||.++++ ++++||||||+|+||.+||++||+++. +||+.| |||||||||+++.++.
T Consensus 88 ~~~~~~~~~~s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d---yfNsGV~linl~~wr~ 164 (257)
T cd06429 88 NLKQRKPEYISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET---SWNPGVNVVNLTEWRR 164 (257)
T ss_pred ccccCCccccCHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh---hcccceEEEeHHHHHh
Confidence 0112345568999999997 679999999999999999999999873 667766 9999999999988776
Q ss_pred HHH----HHHHHhc--C---CCCCCChhHHHHhcc-cceecCCccCccccccCCChHHHHhhhhcccCCCCCCeEEEEec
Q 006648 442 QLL----MDHINEF--E---SYNGGDQGYLNEVFT-WWHRIPKHMNFLKHFWFGDEEEVKQKKTRLFGADPPILYVLHYL 511 (637)
Q Consensus 442 e~L----~e~l~~~--~---sy~~~DQdiLN~vF~-~w~~LP~rYN~l~~~w~~~~~~~~~~k~e~f~~~~~~~kIIHF~ 511 (637)
+.+ ++.+++. . .+.++||++||.+|. +|..||.+||++...+.... . .....+++||||+
T Consensus 165 ~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~~~~~L~~~wN~~~l~~~~~~------~----~~~~~~~~IIHy~ 234 (257)
T cd06429 165 QNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYGLTSPLDPSWHVRGLGYNYGI------R----PQDIKAAAVLHFN 234 (257)
T ss_pred ccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccCeeEECChHHcccCCcccccc------c----ccccCCcEEEEEC
Confidence 554 3333322 1 246789999999998 89999999998732221100 0 1123478999999
Q ss_pred C-CCCCCCCCCCCCCccccccccccchhHHhhHHHHHh
Q 006648 512 G-MKPWLCFRDYDCNWNVDIFQEFASDVAHAKWWRVHD 548 (637)
Q Consensus 512 G-~KPW~~~~~ydcnWn~~~~~~~~sd~~h~~WW~vyd 548 (637)
| .|||+....+ ..++.||+++.
T Consensus 235 G~~KPW~~~~~~---------------~~~~~w~~yl~ 257 (257)
T cd06429 235 GNMKPWLRTAIP---------------SYKELWEKYLS 257 (257)
T ss_pred CCCCCcCCCCCC---------------hHHHHHHHHhC
Confidence 9 9999965321 34689999863
No 9
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.94 E-value=7e-27 Score=246.63 Aligned_cols=200 Identities=20% Similarity=0.280 Sum_probs=151.1
Q ss_pred ecCcchHHHHHHHHHHHHHhCC--CCcEEEEEcCCCCHHHHHHHHHc----CCEEE--EE--eecc-CCccccccccchh
Q 006648 312 HSAHVYVCGAIAAAQSIRMSGS--TRDLVILVDETISAYHRSGLEAA----GWKVR--TI--QRIR-NPKAEKDAYNEWN 380 (637)
Q Consensus 312 tsdd~YL~gAiVL~~SLr~~ns--~~dlVILvtd~ISee~r~~Lk~~----g~~V~--~I--~~I~-~P~~~~~~~~~~t 380 (637)
+.|++|+.+|.|++.||..|+. .+.++||+ ++++++..+.|++. +..+. .+ +.+. .|. ....++..+
T Consensus 8 a~D~nY~~~~gvsI~SiL~~n~~~~~~fhil~-~~i~~e~~~~l~~~~~~f~~~i~~~~id~~~~~~~~~-~~~~~s~~v 85 (325)
T COG1442 8 AFDKNYLIPAGVSIYSLLEHNRKIFYKFHILV-DGLNEEDKKKLNETAEPFKSFIVLEVIDIEPFLDYPP-FTKRFSKMV 85 (325)
T ss_pred EcccccchhHHHHHHHHHHhCccccEEEEEEe-cCCCHHHHHHHHHHHHhhccceeeEEEechhhhcccc-cccchHHHH
Confidence 3489999999999999999998 78889887 58999998877654 33332 22 2111 110 223556678
Q ss_pred HHHHHHccc-CCCceEEEecccccccCCchhhhCCCC----eeeecC------------------CCCcccceEEEEecC
Q 006648 381 YSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFGMPE----ISATGN------------------NGTMFNSGVMVIEPS 437 (637)
Q Consensus 381 ysKL~Iw~L-tdYDRVLYLDAD~LVL~nLDeLFdlp~----IaAv~D------------------~~~yFNSGVMVInPs 437 (637)
|.|+++.++ ++|||+||||+|+||+++|++||.++. ++||.| .+.|||||||++|..
T Consensus 86 ~~R~fiadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~~~~~~~~~~~~~~~~~yFNaG~llinl~ 165 (325)
T COG1442 86 LVRYFLADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHYMKEGALRLEKGDLEGSYFNAGVLLINLK 165 (325)
T ss_pred HHHHHHHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhhhhhhhhHhhhcccccccCccceeeehHH
Confidence 999999998 789999999999999999999999873 666643 358999999999998
Q ss_pred HHHHHHHHHH----HHh-cCCCCCCChhHHHHhcc-cceecCCccCccccccCCChHHHHhhhhcccCCCCCCeEEEEec
Q 006648 438 SCTFQLLMDH----INE-FESYNGGDQGYLNEVFT-WWHRIPKHMNFLKHFWFGDEEEVKQKKTRLFGADPPILYVLHYL 511 (637)
Q Consensus 438 ~~~fe~L~e~----l~~-~~sy~~~DQdiLN~vF~-~w~~LP~rYN~l~~~w~~~~~~~~~~k~e~f~~~~~~~kIIHF~ 511 (637)
.++.+.+.+. +++ ...+..+|||+||.+|. +|..||.+||++.++-..... + .......++.|+||+
T Consensus 166 ~W~~~~i~~k~i~~~~~~~~~~~~~DQdiLN~i~~~~~~~L~~~YN~~~~~~~~~~~-----~--~~~~~~~~~~iiHy~ 238 (325)
T COG1442 166 LWREENIFEKLIELLKDKENDLLYPDQDILNMIFEDRVLELPIRYNAIPYIDSQLKD-----K--YIYPFGDDPVILHYA 238 (325)
T ss_pred HHHHhhhHHHHHHHHhccccccCCccccHHHHHHHhhhhccCcccceeehhhhccch-----h--hhccCCCCceEEEec
Confidence 8877666554 332 34678899999999999 999999999998765321110 0 001123468999999
Q ss_pred C-CCCCCCCC
Q 006648 512 G-MKPWLCFR 520 (637)
Q Consensus 512 G-~KPW~~~~ 520 (637)
| .|||+.+.
T Consensus 239 g~~KPW~~~~ 248 (325)
T COG1442 239 GPTKPWHSDS 248 (325)
T ss_pred CCCCCCcCcc
Confidence 9 69999765
No 10
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=99.94 E-value=7.9e-26 Score=234.70 Aligned_cols=202 Identities=16% Similarity=0.161 Sum_probs=140.3
Q ss_pred EEEEEEeecCcchHHHHHHHHHHHHHhCC-CCcEEEEEcCCCCHHHHHHHHHc----CCEEEEEee--ccCCcc--cccc
Q 006648 305 EAYATILHSAHVYVCGAIAAAQSIRMSGS-TRDLVILVDETISAYHRSGLEAA----GWKVRTIQR--IRNPKA--EKDA 375 (637)
Q Consensus 305 ~AYVTlLtsdd~YL~gAiVL~~SLr~~ns-~~dlVILvtd~ISee~r~~Lk~~----g~~V~~I~~--I~~P~~--~~~~ 375 (637)
.|+| ++. ++|++++.|++.||..++. .+.++|+ +++++++..+.|.+. +.++..+.. ...... ....
T Consensus 3 ~~iv--~~~-~~y~~~~~~~i~Sil~n~~~~~~fhii-~d~~s~~~~~~l~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~ 78 (280)
T cd06431 3 VAIV--CAG-YNASRDVVTLVKSVLFYRRNPLHFHLI-TDEIARRILATLFQTWMVPAVEVSFYNAEELKSRVSWIPNKH 78 (280)
T ss_pred EEEE--Ecc-CCcHHHHHHHHHHHHHcCCCCEEEEEE-ECCcCHHHHHHHHHhccccCcEEEEEEhHHhhhhhccCcccc
Confidence 3455 344 7999999999999999864 3556665 468999988877643 555544432 111100 1123
Q ss_pred ccch-hHHHHHHccc-C-CCceEEEecccccccCCchhhhCC--C----Ce-eeecC------------------CCCcc
Q 006648 376 YNEW-NYSKFRLWQL-T-DYDKIIFIDADLLILRNIDFLFGM--P----EI-SATGN------------------NGTMF 427 (637)
Q Consensus 376 ~~~~-tysKL~Iw~L-t-dYDRVLYLDAD~LVL~nLDeLFdl--p----~I-aAv~D------------------~~~yF 427 (637)
++.. +|+||+++++ + ++|||||||+|+||++||++||++ + .+ ||+.+ .+.||
T Consensus 79 ~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~yF 158 (280)
T cd06431 79 YSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGF 158 (280)
T ss_pred hhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccchhhhhhhhhhccCCCcccccce
Confidence 3333 6799999997 4 599999999999999999999987 2 13 33322 12499
Q ss_pred cceEEEEecCHHHHHHHHHHHH----h----cCCCCCCChhHHHHhcc-c---ceecCCccCccccccCCChHHHHhhhh
Q 006648 428 NSGVMVIEPSSCTFQLLMDHIN----E----FESYNGGDQGYLNEVFT-W---WHRIPKHMNFLKHFWFGDEEEVKQKKT 495 (637)
Q Consensus 428 NSGVMVInPs~~~fe~L~e~l~----~----~~sy~~~DQdiLN~vF~-~---w~~LP~rYN~l~~~w~~~~~~~~~~k~ 495 (637)
|||||+||.+.++.+.+.+.+. + ...+.++|||+||.+|. + ++.||.+||++...... . .
T Consensus 159 NsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~~~~~~~L~~~wN~~~~~~~~-~-------~ 230 (280)
T cd06431 159 NTGVILLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQNPFLVYQLPCAWNVQLSDHTR-S-------E 230 (280)
T ss_pred eeeeeeeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCCcceeEECCCccccccCccch-H-------h
Confidence 9999999999887665544332 2 23567899999999998 6 78999999998643211 0 1
Q ss_pred cccCCCCCCeEEEEecC-CCCCCCC
Q 006648 496 RLFGADPPILYVLHYLG-MKPWLCF 519 (637)
Q Consensus 496 e~f~~~~~~~kIIHF~G-~KPW~~~ 519 (637)
+.+. +..++.||||+| .|||...
T Consensus 231 ~~~~-~~~~p~IIHf~g~~KPW~~~ 254 (280)
T cd06431 231 QCYR-DVSDLKVIHWNSPKKLRVKN 254 (280)
T ss_pred Hhhc-CcCCCEEEEeCCCCCCCCcC
Confidence 1122 245799999999 9999843
No 11
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=99.94 E-value=6.3e-28 Score=258.65 Aligned_cols=353 Identities=37% Similarity=0.541 Sum_probs=288.7
Q ss_pred EEecccCCCCcccccccccccCceeeeccChHHHHhhcCccCccccccc--cccccCCC----CCCCCCCEEEEEEeecC
Q 006648 241 LITKCFPIPNLFPCKELVTREGNAWLYKPNLNVLREKLQLPVGSCELAL--PLRDKDRV----YSGSVHREAYATILHSA 314 (637)
Q Consensus 241 ~~~~c~p~~~~f~c~~l~~~~~~~w~y~~~~~~l~~kl~lpvgsc~la~--pl~~~~~~----~s~~~~R~AYVTlLtsd 314 (637)
+.+.|+++..+++|+.++.++++.|+|++.+...++++.++|++|.+.. ........ ......+.+|++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 86 (369)
T KOG1950|consen 7 EATSLLPVDLLLTIDKLVLNEGDLLLYKTLFLFDDQALVDLVTSLDLLGLLKIGSPLKGVRTTLKLVPKREAYVSLLASR 86 (369)
T ss_pred ccccccccccchhhhHHHhcccceEEeecceeeehhhhhccccchhhhcccccchhhhhhhhhccCCccchhheeeecce
Confidence 6788999999999999999999999999999999999999999999863 22222111 12235689999999988
Q ss_pred cchHHHHHHHHHHHHHhCCCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEeeccCCccccccccchhHHHHHHcccCCCce
Q 006648 315 HVYVCGAIAAAQSIRMSGSTRDLVILVDETISAYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDK 394 (637)
Q Consensus 315 d~YL~gAiVL~~SLr~~ns~~dlVILvtd~ISee~r~~Lk~~g~~V~~I~~I~~P~~~~~~~~~~tysKL~Iw~LtdYDR 394 (637)
-.|.+...|..++.+...+..+++++..+.+.........+.++.+..|+.+.++....+..+.+.|.+++.|.+..+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~a~i~~~~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 166 (369)
T KOG1950|consen 87 VLFKDLDIVIPQSIKSKYSSADLVLLRDDKIKIWRLIEDGAAIYLVDDIQRFRNDDANFDVPNELNYAKLYMFQLDFYSK 166 (369)
T ss_pred eEEEeeeeccCccccccccceeEEeecccceeecceeccCceEEEecchhhccCccccccccchhcccccceeeeccccc
Confidence 88999999999999998888888887544444333222223333334444444444445556677899999999999999
Q ss_pred EEEecccccccCCchhhhC-CCCeeeecCCCCcccceEEEEecCHHHHHHHHHHHHhcCCCCCCChhHHHHhcccce-ec
Q 006648 395 IIFIDADLLILRNIDFLFG-MPEISATGNNGTMFNSGVMVIEPSSCTFQLLMDHINEFESYNGGDQGYLNEVFTWWH-RI 472 (637)
Q Consensus 395 VLYLDAD~LVL~nLDeLFd-lp~IaAv~D~~~yFNSGVMVInPs~~~fe~L~e~l~~~~sy~~~DQdiLN~vF~~w~-~L 472 (637)
.+.+|+|..++.+.+.+|. ++.+++++....+||+|.|++.|+.+.++.+++......++.++||+++|.+|.++. +.
T Consensus 167 ~~~~d~~~~~~~~~~~~f~~~~~~~~~~~l~~~~n~~~~v~~ps~~~~~~~~~~~~~~~~~~~~~q~~l~~~f~~~~~~~ 246 (369)
T KOG1950|consen 167 LVKIDADDCILKNDDLLFSNWPDLFATNILPLIFNSGLLVFEPSLCNYKDLMEFSEEFESYNGADQGFLHLIFSWIPDRP 246 (369)
T ss_pred ceEEeccchhcCChhhhhhhchhhccCCCccceeccCccccCCCccchhhHHHhhcccCCCCCccchhhHHHhhcccCCC
Confidence 9999999999999999999 788999988888899999999999999999999888888999999999999999777 88
Q ss_pred CCccCccccccCCChHHHHhhhhcccCCCCCCeEEEEecC-CCCCCCCCCCCCCccccccccccchhHHhhHHHHHhhcH
Q 006648 473 PKHMNFLKHFWFGDEEEVKQKKTRLFGADPPILYVLHYLG-MKPWLCFRDYDCNWNVDIFQEFASDVAHAKWWRVHDAMP 551 (637)
Q Consensus 473 P~rYN~l~~~w~~~~~~~~~~k~e~f~~~~~~~kIIHF~G-~KPW~~~~~ydcnWn~~~~~~~~sd~~h~~WW~vyd~mp 551 (637)
|..+|+....+.+... +....+......+.+||.| .|||.++++++||++....+.+..+..+..||.+|++++
T Consensus 247 ~~~~n~~~~~~~~~p~-----~~~l~~~~~~~~~~~~y~~~~~p~~~~~~~~~n~~~~~~~~~~~~~~~~~~w~~~~~~~ 321 (369)
T KOG1950|consen 247 PPSVNLNLAKLWRHPK-----KNDLSRASSVLRYALHYLGANKPELCYRDFDCNLDGDEFPRKDIDSLHKKWWDVYDDMS 321 (369)
T ss_pred cccccccccccccCcc-----ccchhhcccccchhhhccccCCCCccccCcccccccccccchhHHHHHhccchhhccCc
Confidence 9999998776443321 1223334445667889999 699999999999998766666677888999999999999
Q ss_pred HHHHHHhhhhhhhhhhhhhhHHHHHHcCCCCCcceeeeecCcccccc
Q 006648 552 EQLQQFCLLRSKQKAQLEFDRRQAEMANYTDGHYKIKVEDGRLKICI 598 (637)
Q Consensus 552 ~~l~~~c~l~~~~~~~~~~~r~~a~~~~~~~~hw~~~~~d~r~~~~~ 598 (637)
..++.+|.+...+.....+.+.+++.+.++.+||.+...+|+...|+
T Consensus 322 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (369)
T KOG1950|consen 322 LDLKVHCKLWAKESTEYPLVRPQAELAAFPEEHDKIDYKAPRAFKAI 368 (369)
T ss_pred hhhhhccccccccccccchhhchhHHhhcccccccccccCchhhhcc
Confidence 99999999998776777789999999999999999999999987764
No 12
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.88 E-value=3.6e-22 Score=209.10 Aligned_cols=198 Identities=18% Similarity=0.256 Sum_probs=138.6
Q ss_pred EEEeecCcchHHHHHHHHHHHHHhCC-CCcEEEEEcCCCCHHHHHHHHHc---CCEEE--EEeeccCCccccccc----c
Q 006648 308 ATILHSAHVYVCGAIAAAQSIRMSGS-TRDLVILVDETISAYHRSGLEAA---GWKVR--TIQRIRNPKAEKDAY----N 377 (637)
Q Consensus 308 VTlLtsdd~YL~gAiVL~~SLr~~ns-~~dlVILvtd~ISee~r~~Lk~~---g~~V~--~I~~I~~P~~~~~~~----~ 377 (637)
++++++++. +..+.+++.|+..++. ...|+|+.++.++++.+++|++. +.+.+ .+.+|..|......+ .
T Consensus 3 ~~vv~~g~~-~~~~~~~lkSil~~n~~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I~~P~~~~~~ws~l~~ 81 (304)
T cd06430 3 LAVVACGER-LEETLTMLKSAIVFSQKPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPITFPSGNAAEWKKLFK 81 (304)
T ss_pred EEEEEcCCc-HHHHHHHHHHHHHhCCCCEEEEEEECCccCHHHHHHHHHHHHhccceeeeEEEEEecCccchhhhhhccc
Confidence 455566554 8999999999988763 45678887777888887777765 22333 445555554432222 2
Q ss_pred chhHHHHHHccc-CCCceEEEecccccccCCchhhhCC--C----Ceeee-cCC------------------CCcccceE
Q 006648 378 EWNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFGM--P----EISAT-GNN------------------GTMFNSGV 431 (637)
Q Consensus 378 ~~tysKL~Iw~L-tdYDRVLYLDAD~LVL~nLDeLFdl--p----~IaAv-~D~------------------~~yFNSGV 431 (637)
..+|+||+++++ +++|||||||+|+||++||++||++ + .++|+ ++. ..+|||||
T Consensus 82 ~~~y~RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~~~~~~~~~~~~~~~~gFNSGV 161 (304)
T cd06430 82 PCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYNRFARHPYYGKTGVNSGV 161 (304)
T ss_pred HHHHHHHHHHHHhhhhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccchhhhhhhcccCcccccccccce
Confidence 368999999996 7889999999999999999999986 3 25554 221 13599999
Q ss_pred EEEecCHHHH---------------HHHHHHHHh-cCCCCCCChhHHHHhcc-c---ceecCCccCccccccCCChHHHH
Q 006648 432 MVIEPSSCTF---------------QLLMDHINE-FESYNGGDQGYLNEVFT-W---WHRIPKHMNFLKHFWFGDEEEVK 491 (637)
Q Consensus 432 MVInPs~~~f---------------e~L~e~l~~-~~sy~~~DQdiLN~vF~-~---w~~LP~rYN~l~~~w~~~~~~~~ 491 (637)
|+||...++. +++++.+++ ...+.++|||+||.+|. + +..||.+||++........
T Consensus 162 mLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~DQDiLN~v~~~~p~~~~~Lp~~wN~~~d~~~y~~---- 237 (304)
T cd06430 162 MLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHHNPEMLYVFPCHWNYRPDHCMYGS---- 237 (304)
T ss_pred eeeeHHHHHhhhcccccchhhhhHHHHHHHHHHhcccCCCCCCHHHHHHHHcCCCCeEEEcCccccCCccceeecc----
Confidence 9999987765 234555554 34577899999999999 4 7899999998774311000
Q ss_pred hhhhcccCCCCCCeEEEEecC-CC
Q 006648 492 QKKTRLFGADPPILYVLHYLG-MK 514 (637)
Q Consensus 492 ~~k~e~f~~~~~~~kIIHF~G-~K 514 (637)
....++...+++||..+ .|
T Consensus 238 ----~~~~~~~~~~~~~H~n~~~~ 257 (304)
T cd06430 238 ----NCKAAEEEGVFILHGNRGVY 257 (304)
T ss_pred ----cccccccccceEEEcCCCCC
Confidence 01112345799999986 44
No 13
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=99.87 E-value=1.5e-21 Score=199.52 Aligned_cols=185 Identities=18% Similarity=0.196 Sum_probs=132.2
Q ss_pred ecCcchHHHHHHHHHHHHHhCC-CCcEEEEEcCCCCHHHHHHHHHc----CCEEEEEeeccCCcccc----ccccchhHH
Q 006648 312 HSAHVYVCGAIAAAQSIRMSGS-TRDLVILVDETISAYHRSGLEAA----GWKVRTIQRIRNPKAEK----DAYNEWNYS 382 (637)
Q Consensus 312 tsdd~YL~gAiVL~~SLr~~ns-~~dlVILvtd~ISee~r~~Lk~~----g~~V~~I~~I~~P~~~~----~~~~~~tys 382 (637)
++++.|+.++.|++.||..++. .+.|+|+. +++|++.++.|++. +.++..+.. ..+.... .....++|.
T Consensus 7 ~~~~~y~~~~~v~l~Sll~nn~~~~~fyil~-~~is~e~~~~l~~~~~~~~~~i~~i~i-~~~~~~~~~~~~~~~~~~y~ 84 (248)
T cd06432 7 ASGHLYERFLRIMMLSVMKNTKSPVKFWFIK-NFLSPQFKEFLPEMAKEYGFEYELVTY-KWPRWLHKQTEKQRIIWGYK 84 (248)
T ss_pred cCcHHHHHHHHHHHHHHHHcCCCCEEEEEEe-CCCCHHHHHHHHHHHHHhCCceEEEEe-cChhhhhcccccchhHHHHH
Confidence 5678999999999999999863 56677776 68999988877653 555443322 2111100 011135788
Q ss_pred HHHHccc-C-CCceEEEecccccccCCchhhhCCCC----eeeecC-----------------------CCCcccceEEE
Q 006648 383 KFRLWQL-T-DYDKIIFIDADLLILRNIDFLFGMPE----ISATGN-----------------------NGTMFNSGVMV 433 (637)
Q Consensus 383 KL~Iw~L-t-dYDRVLYLDAD~LVL~nLDeLFdlp~----IaAv~D-----------------------~~~yFNSGVMV 433 (637)
||.+..+ + ++|||||||+|+||.+||++||+++. +||+.+ ...|||||||+
T Consensus 85 rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~~~~~~~~~~~~~~~~l~~~~YfNSGVml 164 (248)
T cd06432 85 ILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKEMDGFRFWKQGYWKSHLRGRPYHISALYV 164 (248)
T ss_pred HHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchhcccchhhhhhhhhhhcCCCCccceeeEE
Confidence 8888854 4 69999999999999999999999873 555532 11399999999
Q ss_pred EecCHHHHHHHHHH----HH---h-cCCCCCCChhHHHHhcc-c-ceecCCccCccccccCCChHHHHhhhhcccCCCCC
Q 006648 434 IEPSSCTFQLLMDH----IN---E-FESYNGGDQGYLNEVFT-W-WHRIPKHMNFLKHFWFGDEEEVKQKKTRLFGADPP 503 (637)
Q Consensus 434 InPs~~~fe~L~e~----l~---~-~~sy~~~DQdiLN~vF~-~-w~~LP~rYN~l~~~w~~~~~~~~~~k~e~f~~~~~ 503 (637)
||..+++.+.+.+. ++ + ...+.++|||+||.++. . ++.||.+||++.. |-.++ ..+
T Consensus 165 iNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN~v~~~~~i~~Lp~~w~~~~~-~~~~~-------------~~~ 230 (248)
T cd06432 165 VDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPNNMQHQVPIFSLPQEWLWCET-WCSDE-------------SKK 230 (248)
T ss_pred EeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchhhHHHhccCCeEECChHHHHHHH-Hhccc-------------ccC
Confidence 99998887765542 22 2 34578899999999996 4 9999999999643 22211 134
Q ss_pred CeEEEEecC
Q 006648 504 ILYVLHYLG 512 (637)
Q Consensus 504 ~~kIIHF~G 512 (637)
.+++|||..
T Consensus 231 ~~~~~~~~~ 239 (248)
T cd06432 231 KAKTIDLCN 239 (248)
T ss_pred ccceeeccc
Confidence 688999974
No 14
>PLN02523 galacturonosyltransferase
Probab=99.85 E-value=1.2e-20 Score=207.91 Aligned_cols=213 Identities=18% Similarity=0.207 Sum_probs=146.8
Q ss_pred HHHHHHHHHHHHHh-CCCCcEE-EEEcCCCCHHHHHHHHHc----C--CEEEEEeecc--C----Cc-----c-------
Q 006648 318 VCGAIAAAQSIRMS-GSTRDLV-ILVDETISAYHRSGLEAA----G--WKVRTIQRIR--N----PK-----A------- 371 (637)
Q Consensus 318 L~gAiVL~~SLr~~-ns~~dlV-ILvtd~ISee~r~~Lk~~----g--~~V~~I~~I~--~----P~-----~------- 371 (637)
+.+|.|.+.|+..+ ++..++| .++||.++....+.+-.. + ++|..|+.+. + |. .
T Consensus 258 vlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V~~Iedf~~ln~~~~pvlk~l~s~~~~~~~ 337 (559)
T PLN02523 258 VIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEVKAVEDYKFLNSSYVPVLRQLESANLQKFY 337 (559)
T ss_pred chhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEEEEeehhhhcccccchHHHhhhhhhhhhhh
Confidence 89999999999987 5554543 346788998776655332 2 3345554211 1 10 0
Q ss_pred --------c----------cccccchhHHHHHHccc-CCCceEEEecccccccCCchhhhCCCC----eeeecCC-----
Q 006648 372 --------E----------KDAYNEWNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFGMPE----ISATGNN----- 423 (637)
Q Consensus 372 --------~----------~~~~~~~tysKL~Iw~L-tdYDRVLYLDAD~LVL~nLDeLFdlp~----IaAv~D~----- 423 (637)
. ....+..+|+||+|+++ ++++||||||+|+||.+||++||+++. ++|+.+.
T Consensus 338 f~~~~~~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~ldKVLYLD~DVVVq~DLseLw~iDL~gkv~aAVeDc~~~~~ 417 (559)
T PLN02523 338 FENKLENATKDSSNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWKIDMDGKVNGAVETCFGSFH 417 (559)
T ss_pred ccccccccccccccccccCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEecCCHHHHHhCcCCCceEEEehhhhhHHH
Confidence 0 01123357999999997 779999999999999999999999873 5555431
Q ss_pred -------------CCcccc-------eEEEEecCHHHHHHHHHHHH----hcCCCCCCChhHHH---Hhcc-cceecCCc
Q 006648 424 -------------GTMFNS-------GVMVIEPSSCTFQLLMDHIN----EFESYNGGDQGYLN---EVFT-WWHRIPKH 475 (637)
Q Consensus 424 -------------~~yFNS-------GVMVInPs~~~fe~L~e~l~----~~~sy~~~DQdiLN---~vF~-~w~~LP~r 475 (637)
..|||+ ||||||...++.+++.+.+. ........|||.|| .+|. ++..|+.+
T Consensus 418 r~~~~ln~s~p~i~~yFNs~aC~wnsGVmlINL~~WRe~nITek~~~w~~ln~~~~l~DqdaLpp~LivF~gri~~LD~r 497 (559)
T PLN02523 418 RYAQYLNFSHPLIKEKFNPKACAWAYGMNIFDLDAWRREKCTEQYHYWQNLNENRTLWKLGTLPPGLITFYSTTKPLDKS 497 (559)
T ss_pred HHHHhhcccchhhhhCcCCCcccccCCcEEEeHHHHHHhchHHHHHHHHHhccccccccccccchHHHHhcCceEecCch
Confidence 136776 99999999998887766543 12345678999996 7787 99999999
Q ss_pred cCccccccCCChHHHHhhhhcccCCCCCCeEEEEecC-CCCCCCCCCCCCCccccccccccchhHHhhHHHHHhhcHHHH
Q 006648 476 MNFLKHFWFGDEEEVKQKKTRLFGADPPILYVLHYLG-MKPWLCFRDYDCNWNVDIFQEFASDVAHAKWWRVHDAMPEQL 554 (637)
Q Consensus 476 YN~l~~~w~~~~~~~~~~k~e~f~~~~~~~kIIHF~G-~KPW~~~~~ydcnWn~~~~~~~~sd~~h~~WW~vyd~mp~~l 554 (637)
||++...+.. .....+.+++.||||+| .|||...... .+.+.||++++.=-+.+
T Consensus 498 WNvlglGy~~----------~i~~~~i~~paIIHYnG~~KPWle~~i~---------------~yr~~W~kYl~~~~~fl 552 (559)
T PLN02523 498 WHVLGLGYNP----------SISMDEIRNAAVIHFNGNMKPWLDIAMN---------------QFKPLWTKYVDYDMEFV 552 (559)
T ss_pred hhccCCccCC----------CccccccCCCEEEEECCCCCccccCCCC---------------cchHHHHHHHccCCHHH
Confidence 9986533211 01112346799999999 9999854321 24678999887655555
Q ss_pred H
Q 006648 555 Q 555 (637)
Q Consensus 555 ~ 555 (637)
+
T Consensus 553 ~ 553 (559)
T PLN02523 553 Q 553 (559)
T ss_pred H
Confidence 4
No 15
>PLN02718 Probable galacturonosyltransferase
Probab=99.83 E-value=3.2e-20 Score=206.68 Aligned_cols=193 Identities=18% Similarity=0.167 Sum_probs=133.2
Q ss_pred cchHHHHHHHHHHHHHh--CCC-CcEEEEEcCCCCHHHHHHHHHc----CCE--EEEEeeccC-Ccc-----------cc
Q 006648 315 HVYVCGAIAAAQSIRMS--GST-RDLVILVDETISAYHRSGLEAA----GWK--VRTIQRIRN-PKA-----------EK 373 (637)
Q Consensus 315 d~YL~gAiVL~~SLr~~--ns~-~dlVILvtd~ISee~r~~Lk~~----g~~--V~~I~~I~~-P~~-----------~~ 373 (637)
|+|+ ++.|++.|+..+ ++. +.|+ +++|+++.+..+.+... +.. ++.|+.... |.. ..
T Consensus 321 DNvl-aasVvInSil~Ns~np~~ivFH-VvTD~is~~~mk~wf~l~~~~~a~I~V~~Iddf~~lp~~~~~~lk~l~s~~~ 398 (603)
T PLN02718 321 DNVL-ACSVVVNSTISSSKEPEKIVFH-VVTDSLNYPAISMWFLLNPPGKATIQILNIDDMNVLPADYNSLLMKQNSHDP 398 (603)
T ss_pred CCce-eEEEEhhhhhhccCCCCcEEEE-EEeCCCCHHHHHHHHHhCCCCCcEEEEEecchhccccccchhhhhhcccccc
Confidence 5675 899999999987 343 3334 35788999888766543 223 333332110 110 01
Q ss_pred ccccchhHHHHHHccc-CCCceEEEecccccccCCchhhhCCCC----eeeecC--------------------------
Q 006648 374 DAYNEWNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFGMPE----ISATGN-------------------------- 422 (637)
Q Consensus 374 ~~~~~~tysKL~Iw~L-tdYDRVLYLDAD~LVL~nLDeLFdlp~----IaAv~D-------------------------- 422 (637)
..++..+|+||+++++ ++++||||||+|+||.+||++||+++. ++|+.+
T Consensus 399 ~~~S~~~y~Rl~ipellp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~~~lnfs~p~i~~~f 478 (603)
T PLN02718 399 RYISALNHARFYLPDIFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMDTFINFSDPWVAKKF 478 (603)
T ss_pred ccccHHHHHHHHHHHHhcccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhhhhhhccchhhhccc
Confidence 2334568999999997 679999999999999999999999873 444432
Q ss_pred --CCCcccceEEEEecCHHHHHHHHH----HHHhcCCCCCCChhHHH---Hhcc-cceecCCccCccccccCCChHHHHh
Q 006648 423 --NGTMFNSGVMVIEPSSCTFQLLMD----HINEFESYNGGDQGYLN---EVFT-WWHRIPKHMNFLKHFWFGDEEEVKQ 492 (637)
Q Consensus 423 --~~~yFNSGVMVInPs~~~fe~L~e----~l~~~~sy~~~DQdiLN---~vF~-~w~~LP~rYN~l~~~w~~~~~~~~~ 492 (637)
..+|||+|||||++..++.+.+.+ .+.......+.|||.|| .+|. ++..||.+||.+...+....
T Consensus 479 n~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~n~~~~l~dqdaLpp~LlvF~gri~~LD~rWNv~gLG~~~~i----- 553 (603)
T PLN02718 479 DPKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVKRPLWKAGSLPIGWLTFYNQTVALDKRWHVLGLGHESGV----- 553 (603)
T ss_pred CCCccccccceEEEeHHHHHhcChHHHHHHHHHhccCccccCcccccHHHHHhcCceeecChHHhccCccccccc-----
Confidence 125689999999999988776554 34333333567899987 7887 89999999998753321100
Q ss_pred hhhcccCCCCCCeEEEEecC-CCCCCCC
Q 006648 493 KKTRLFGADPPILYVLHYLG-MKPWLCF 519 (637)
Q Consensus 493 ~k~e~f~~~~~~~kIIHF~G-~KPW~~~ 519 (637)
...+..++.||||+| .|||...
T Consensus 554 -----~~~~i~~aaIIHYnG~~KPWle~ 576 (603)
T PLN02718 554 -----GASDIEQAAVIHYDGVMKPWLDI 576 (603)
T ss_pred -----cccccCCCEEEEECCCCCccccC
Confidence 011356789999999 9999854
No 16
>PLN02769 Probable galacturonosyltransferase
Probab=99.81 E-value=1.1e-19 Score=203.08 Aligned_cols=153 Identities=20% Similarity=0.219 Sum_probs=112.7
Q ss_pred chhHHHHHHccc-CCCceEEEecccccccCCchhhhCCCC----eeeecC-------------------CCCcccceEEE
Q 006648 378 EWNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFGMPE----ISATGN-------------------NGTMFNSGVMV 433 (637)
Q Consensus 378 ~~tysKL~Iw~L-tdYDRVLYLDAD~LVL~nLDeLFdlp~----IaAv~D-------------------~~~yFNSGVMV 433 (637)
..+|+||+|+++ ++++||||||+|+||.+||++||+++. ++|+.+ ...||||||||
T Consensus 437 ~~nh~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~rl~~~~~yl~~~~F~~~~CyFNSGVLL 516 (629)
T PLN02769 437 VFSHSHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCGVRLGQLKNYLGDTNFDTNSCAWMSGLNV 516 (629)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCCeEEEehhhhhhhhhhhhhhcccCCCccccccccCeeE
Confidence 358999999997 679999999999999999999999873 666642 23578999999
Q ss_pred EecCHHHHHHHHHH----HHh-----cCCCCCCChhHHHHhcc-cceecCCccCccccccCCChHHHHhhhhcccCCCCC
Q 006648 434 IEPSSCTFQLLMDH----INE-----FESYNGGDQGYLNEVFT-WWHRIPKHMNFLKHFWFGDEEEVKQKKTRLFGADPP 503 (637)
Q Consensus 434 InPs~~~fe~L~e~----l~~-----~~sy~~~DQdiLN~vF~-~w~~LP~rYN~l~~~w~~~~~~~~~~k~e~f~~~~~ 503 (637)
||+..++.+.+.+. +.+ ...+..++|+.+|.+|. +++.||.+||++...+... ......+
T Consensus 517 INL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~lnlvF~g~v~~LD~rWNv~gLG~~~~----------i~~~~i~ 586 (629)
T PLN02769 517 IDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASLLTFQDLIYPLDDRWVLSGLGHDYG----------IDEQAIK 586 (629)
T ss_pred eeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHHHHhcCeEEECCHHHcccccccccc----------ccccccC
Confidence 99998876654432 221 12345678889999998 8999999999864222110 0012245
Q ss_pred CeEEEEecC-CCCCCCCCCCCCCccccccccccchhHHhhHHHHHhhcHHHHH
Q 006648 504 ILYVLHYLG-MKPWLCFRDYDCNWNVDIFQEFASDVAHAKWWRVHDAMPEQLQ 555 (637)
Q Consensus 504 ~~kIIHF~G-~KPW~~~~~ydcnWn~~~~~~~~sd~~h~~WW~vyd~mp~~l~ 555 (637)
+++||||+| .|||+.... ..+.+.||+|++.=-+.++
T Consensus 587 ~paIIHYnG~~KPW~e~~i---------------~~yr~~W~kYl~~~~~fl~ 624 (629)
T PLN02769 587 KAAVLHYNGNMKPWLELGI---------------PKYKKYWKRFLNRDDRFMD 624 (629)
T ss_pred CcEEEEECCCCCCccCCCC---------------ChHHHHHHHHhccCChHHh
Confidence 799999999 999986431 1357899999886555554
No 17
>PLN02867 Probable galacturonosyltransferase
Probab=99.79 E-value=2e-19 Score=198.44 Aligned_cols=133 Identities=19% Similarity=0.232 Sum_probs=100.9
Q ss_pred hhHHHHHHccc-CCCceEEEecccccccCCchhhhCCCC----eeeecC------------------------------C
Q 006648 379 WNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFGMPE----ISATGN------------------------------N 423 (637)
Q Consensus 379 ~tysKL~Iw~L-tdYDRVLYLDAD~LVL~nLDeLFdlp~----IaAv~D------------------------------~ 423 (637)
.+|+||+|+++ ++++||||||+|+||.+||++||+++. ++|+.| .
T Consensus 331 lnYlRflIPeLLP~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlNfsnp~i~~~~~p~ 410 (535)
T PLN02867 331 LNHLRIYIPELFPDLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNFSHPLISSNLDQE 410 (535)
T ss_pred HHHHHHHHHHHhhccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhccccchhhhccCCCC
Confidence 58999999997 789999999999999999999999973 677632 1
Q ss_pred CCcccceEEEEecCHHHHHHHHHH----HHhc--CCCCCCChhHHHH---hcc-cceecCCccCccccccCCChHHHHhh
Q 006648 424 GTMFNSGVMVIEPSSCTFQLLMDH----INEF--ESYNGGDQGYLNE---VFT-WWHRIPKHMNFLKHFWFGDEEEVKQK 493 (637)
Q Consensus 424 ~~yFNSGVMVInPs~~~fe~L~e~----l~~~--~sy~~~DQdiLN~---vF~-~w~~LP~rYN~l~~~w~~~~~~~~~~ 493 (637)
..||||||||||...++.+++.+. ++.. ......|||.||. +|. +|+.||.+||++...+...
T Consensus 411 ~cYFNSGVmLINL~~WRe~nITek~~~~Le~n~~~~~~l~dqd~LN~~LlvF~g~v~~LD~rWNv~gLgy~~~------- 483 (535)
T PLN02867 411 RCAWLYGMNVFDLKAWRRTNITEAYHKWLKLSLNSGLQLWQPGALPPALLAFKGHVHPIDPSWHVAGLGSRPP------- 483 (535)
T ss_pred CcceecceeeeeHHHHHHhcHHHHHHHHHHhchhcccccccccccchHHHHhcCcEEECChhhcccCCCcccc-------
Confidence 347889999999999887777554 3332 2245689999996 777 8999999999843222110
Q ss_pred hhcccCCCCCCeEEEEecC-CCCCCCCC
Q 006648 494 KTRLFGADPPILYVLHYLG-MKPWLCFR 520 (637)
Q Consensus 494 k~e~f~~~~~~~kIIHF~G-~KPW~~~~ 520 (637)
.......+++.||||+| .|||+...
T Consensus 484 --~~~~~~i~~paIIHYnG~~KPW~e~~ 509 (535)
T PLN02867 484 --EVPREILESAAVLHFSGPAKPWLEIG 509 (535)
T ss_pred --cchhhhcCCcEEEEECCCCCcccccC
Confidence 00112246799999999 99999653
No 18
>PLN02659 Probable galacturonosyltransferase
Probab=99.78 E-value=3.6e-19 Score=195.92 Aligned_cols=156 Identities=19% Similarity=0.275 Sum_probs=113.7
Q ss_pred chhHHHHHHccc-CCCceEEEecccccccCCchhhhCCCC----eeeecC------------------------------
Q 006648 378 EWNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFGMPE----ISATGN------------------------------ 422 (637)
Q Consensus 378 ~~tysKL~Iw~L-tdYDRVLYLDAD~LVL~nLDeLFdlp~----IaAv~D------------------------------ 422 (637)
-.+|+||+|+++ ++++||||||+|+||.+||++||+++. ++|+.+
T Consensus 329 ~~nY~RL~IPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~s~p~i~~yFn~ 408 (534)
T PLN02659 329 VMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNFSHPLIAKNFDP 408 (534)
T ss_pred HHHHHHHHHHHHhhhcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhcccchhhhhccCc
Confidence 358999999997 789999999999999999999999873 455432
Q ss_pred CCCcccceEEEEecCHHHHHHHHH----HHHhc--CCCCCCChhHH---HHhcc-cceecCCccCccccccCCChHHHHh
Q 006648 423 NGTMFNSGVMVIEPSSCTFQLLMD----HINEF--ESYNGGDQGYL---NEVFT-WWHRIPKHMNFLKHFWFGDEEEVKQ 492 (637)
Q Consensus 423 ~~~yFNSGVMVInPs~~~fe~L~e----~l~~~--~sy~~~DQdiL---N~vF~-~w~~LP~rYN~l~~~w~~~~~~~~~ 492 (637)
...|||||||+||.+.++.+++.+ .+++. ..+...|||+| |.+|. +++.||.+||++...+....
T Consensus 409 ~~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~~~~l~l~DQdaLp~~LivF~g~v~~LD~rWN~~gLg~~~~~----- 483 (534)
T PLN02659 409 NECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENT----- 483 (534)
T ss_pred cccceecceeEeeHHHHHhcChHHHHHHHHHhcccccccccccccchHHHHHhcCCEEECChhheecCCcccccc-----
Confidence 124788999999999888665544 44332 34567899999 57888 99999999998543221110
Q ss_pred hhhcccCCCCCCeEEEEecC-CCCCCCCCCCCCCccccccccccchhHHhhHHHHHhhcHHHHHHHhh
Q 006648 493 KKTRLFGADPPILYVLHYLG-MKPWLCFRDYDCNWNVDIFQEFASDVAHAKWWRVHDAMPEQLQQFCL 559 (637)
Q Consensus 493 ~k~e~f~~~~~~~kIIHF~G-~KPW~~~~~ydcnWn~~~~~~~~sd~~h~~WW~vyd~mp~~l~~~c~ 559 (637)
.+. +.+++.||||+| .|||..... ..++..|=++.+.--+.++ -|.
T Consensus 484 ----~~~-~i~~paIIHYnG~~KPW~~~~~---------------~~yr~~W~kYl~~s~~fl~-~Cn 530 (534)
T PLN02659 484 ----SLA-DAESAGVVHFNGRAKPWLDIAF---------------PQLRPLWAKYIDSSDKFIK-SCH 530 (534)
T ss_pred ----ccc-ccCCcEEEEECCCCCccccccC---------------CcchhHHHHHhccCCHHHH-hcC
Confidence 011 246789999999 999996532 1245778777776666665 344
No 19
>PLN02870 Probable galacturonosyltransferase
Probab=99.77 E-value=5.4e-19 Score=194.51 Aligned_cols=132 Identities=21% Similarity=0.281 Sum_probs=100.3
Q ss_pred chhHHHHHHccc-CCCceEEEecccccccCCchhhhCCCC----eeeecC------------------------------
Q 006648 378 EWNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFGMPE----ISATGN------------------------------ 422 (637)
Q Consensus 378 ~~tysKL~Iw~L-tdYDRVLYLDAD~LVL~nLDeLFdlp~----IaAv~D------------------------------ 422 (637)
..+|+||+++++ ++++||||||+|+||++||++||+++. ++|+.+
T Consensus 328 ~lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfNfs~p~i~~~fd~ 407 (533)
T PLN02870 328 LLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKNLDP 407 (533)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhcccccchhhcccCc
Confidence 458999999997 779999999999999999999999973 555543
Q ss_pred CCCcccceEEEEecCHHHHHHHHH----HHHhc--CCCCCCChhHH---HHhcc-cceecCCccCccccccCCChHHHHh
Q 006648 423 NGTMFNSGVMVIEPSSCTFQLLMD----HINEF--ESYNGGDQGYL---NEVFT-WWHRIPKHMNFLKHFWFGDEEEVKQ 492 (637)
Q Consensus 423 ~~~yFNSGVMVInPs~~~fe~L~e----~l~~~--~sy~~~DQdiL---N~vF~-~w~~LP~rYN~l~~~w~~~~~~~~~ 492 (637)
...|||||||+||++.++.+++.+ .+++. ..+.+.|||.| |.+|. +++.||.+||++...+..
T Consensus 408 ~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~l~l~DQdaLp~~livf~g~v~~LD~rWN~~gLgy~~------- 480 (533)
T PLN02870 408 EECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHMLGLGYQS------- 480 (533)
T ss_pred ccceeeccchhccHHHHHHcChHHHHHHHHHhhhhcCceecccccccHhHHHhcCceEECChHHhcCCCCCcc-------
Confidence 123566999999999887766554 34332 34668999999 57887 899999999986432211
Q ss_pred hhhcccCCCCCCeEEEEecC-CCCCCCC
Q 006648 493 KKTRLFGADPPILYVLHYLG-MKPWLCF 519 (637)
Q Consensus 493 ~k~e~f~~~~~~~kIIHF~G-~KPW~~~ 519 (637)
.......+++.||||+| .|||+..
T Consensus 481 ---~~~~~~i~~aaIIHY~G~~KPW~~~ 505 (533)
T PLN02870 481 ---KTNIESVKKAAVIHYNGQSKPWLEI 505 (533)
T ss_pred ---cccccccCCcEEEEECCCCCCcccc
Confidence 11122356799999999 9999854
No 20
>PLN02742 Probable galacturonosyltransferase
Probab=99.76 E-value=6.2e-18 Score=186.49 Aligned_cols=153 Identities=18% Similarity=0.208 Sum_probs=113.4
Q ss_pred chhHHHHHHccc-CCCceEEEecccccccCCchhhhCCCC----eeeecC-------------------------CCCcc
Q 006648 378 EWNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFGMPE----ISATGN-------------------------NGTMF 427 (637)
Q Consensus 378 ~~tysKL~Iw~L-tdYDRVLYLDAD~LVL~nLDeLFdlp~----IaAv~D-------------------------~~~yF 427 (637)
..+|.||+++++ ++++||||||+|+||.+||++||+++. ++|+.+ ..++|
T Consensus 338 ~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaAVedC~~~f~ry~~yLnfS~p~i~~~f~~~aC~f 417 (534)
T PLN02742 338 MLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVETCLETFHRYHKYLNFSHPLISSHFDPDACGW 417 (534)
T ss_pred HHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEEeCchhhhhhhhhhhhcccchhhhccCCCCcccc
Confidence 358999999997 679999999999999999999999873 566542 24689
Q ss_pred cceEEEEecCHHHHHHHHHHHH----hcCCCCCCChhHHHHh---cc-cceecCCccCccccccCCChHHHHhhhhcccC
Q 006648 428 NSGVMVIEPSSCTFQLLMDHIN----EFESYNGGDQGYLNEV---FT-WWHRIPKHMNFLKHFWFGDEEEVKQKKTRLFG 499 (637)
Q Consensus 428 NSGVMVInPs~~~fe~L~e~l~----~~~sy~~~DQdiLN~v---F~-~w~~LP~rYN~l~~~w~~~~~~~~~~k~e~f~ 499 (637)
|+|||||++..++.+.+.+.+. ........|||.||.. |. .+..|+.+||++...+.... . .
T Consensus 418 NsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~gaLpp~LLaF~g~~~~LD~rWNv~gLG~~~~v------~----~ 487 (534)
T PLN02742 418 AFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTLPPGLLTFYGLTEPLDRRWHVLGLGYDTNI------D----P 487 (534)
T ss_pred ccCcEEEeHHHHHhhcHHHHHHHHHHhccccccccccccchHHHHHcCcceecChhheeccccccccc------c----h
Confidence 9999999999988777655432 2334456799999964 76 89999999998643221100 0 1
Q ss_pred CCCCCeEEEEecC-CCCCCCCCCCCCCccccccccccchhHHhhHHHHHhhcHHHHH
Q 006648 500 ADPPILYVLHYLG-MKPWLCFRDYDCNWNVDIFQEFASDVAHAKWWRVHDAMPEQLQ 555 (637)
Q Consensus 500 ~~~~~~kIIHF~G-~KPW~~~~~ydcnWn~~~~~~~~sd~~h~~WW~vyd~mp~~l~ 555 (637)
....++.||||+| .|||..... + .+.+.|+++.+.--+.++
T Consensus 488 ~~i~~aaILHynG~~KPWl~~~i----------~-----~yr~~W~kYl~~s~~fl~ 529 (534)
T PLN02742 488 RLIESAAVLHFNGNMKPWLKLAI----------E-----RYKPLWERYVNYSHPYLQ 529 (534)
T ss_pred hhccCCeEEEECCCCCcccccCC----------c-----ccchHHHHHHccCCHHHH
Confidence 1345789999999 999986521 1 135689998887666665
No 21
>PLN02829 Probable galacturonosyltransferase
Probab=99.74 E-value=4.7e-18 Score=189.42 Aligned_cols=156 Identities=19% Similarity=0.220 Sum_probs=110.9
Q ss_pred chhHHHHHHccc-CCCceEEEecccccccCCchhhhCCCC----eeeecC-------------------------CCCcc
Q 006648 378 EWNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFGMPE----ISATGN-------------------------NGTMF 427 (637)
Q Consensus 378 ~~tysKL~Iw~L-tdYDRVLYLDAD~LVL~nLDeLFdlp~----IaAv~D-------------------------~~~yF 427 (637)
..+|+||+|+++ ++++||||||+|+||++||++||+++. ++|+.+ ..+||
T Consensus 442 ~lnY~RfyLPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~~f~r~~~~l~fs~p~i~~~Fn~~~CyF 521 (639)
T PLN02829 442 ILNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVETCGESFHRFDRYLNFSNPLISKNFDPHACGW 521 (639)
T ss_pred HHHHHHHHHHHHhcccCeEEEEeCCEEeCCChHHHHhCCCCCceEEEeccchhhhhhhhhhhhccchHhhhccCCcccce
Confidence 347999999997 679999999999999999999999873 555532 23589
Q ss_pred cceEEEEecCHHHHHHHHHHH----HhcCCCCCCChhHHHHh---cc-cceecCCccCccccccCCChHHHHhhhhcccC
Q 006648 428 NSGVMVIEPSSCTFQLLMDHI----NEFESYNGGDQGYLNEV---FT-WWHRIPKHMNFLKHFWFGDEEEVKQKKTRLFG 499 (637)
Q Consensus 428 NSGVMVInPs~~~fe~L~e~l----~~~~sy~~~DQdiLN~v---F~-~w~~LP~rYN~l~~~w~~~~~~~~~~k~e~f~ 499 (637)
|+||||||...|+.+.+.+.+ .....-...|||.||.. |. ++..|+.+||++...+. ...+.
T Consensus 522 NSGVmVINL~~WRe~nITe~y~~wm~~n~~r~L~dlgaLPp~Ll~F~g~i~~LD~rWNv~GLGy~----------~~v~~ 591 (639)
T PLN02829 522 AYGMNVFDLDEWKRQNITEVYHSWQKLNHDRQLWKLGTLPPGLITFWKRTYPLDRSWHVLGLGYN----------PNVNQ 591 (639)
T ss_pred ecceEEEeHHHHHHhChHHHHHHHHHHccCCccccccCCChHHHHhcCceEecChhheecCCCCC----------cccch
Confidence 999999999998877654433 22222234789999975 45 89999999999764321 11122
Q ss_pred CCCCCeEEEEecC-CCCCCCCCCCCCCccccccccccchhHHhhHHHHHhhcHHHHHHHhh
Q 006648 500 ADPPILYVLHYLG-MKPWLCFRDYDCNWNVDIFQEFASDVAHAKWWRVHDAMPEQLQQFCL 559 (637)
Q Consensus 500 ~~~~~~kIIHF~G-~KPW~~~~~ydcnWn~~~~~~~~sd~~h~~WW~vyd~mp~~l~~~c~ 559 (637)
.+..++.||||+| .|||..... + .+.+.|..|.+.=-+.++ -|.
T Consensus 592 ~~i~~aaIIHynG~~KPWle~~i----------~-----~yr~lW~kYl~~~~~fl~-~Cn 636 (639)
T PLN02829 592 RDIERAAVIHYNGNMKPWLEIGI----------P-----KYRNYWSKYVDYDQVYLR-ECN 636 (639)
T ss_pred hcccCCeEEEECCCCCccccCCc----------c-----cchHHHHHHHhcCchHHH-hCC
Confidence 3456789999999 999986421 1 235677776655444444 354
No 22
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=99.70 E-value=3e-17 Score=182.86 Aligned_cols=131 Identities=20% Similarity=0.264 Sum_probs=100.5
Q ss_pred hhHHHHHHccc-CCCceEEEecccccccCCchhhhCCCC----eeeecC-------------------------CCCccc
Q 006648 379 WNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFGMPE----ISATGN-------------------------NGTMFN 428 (637)
Q Consensus 379 ~tysKL~Iw~L-tdYDRVLYLDAD~LVL~nLDeLFdlp~----IaAv~D-------------------------~~~yFN 428 (637)
.+|+||+++++ ++++||||||+|+||.+||++||+++. ++|+.+ ..++||
T Consensus 461 lnY~Rf~LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc~~~f~r~~~ylnfs~P~i~~yFNs~aCyfN 540 (657)
T PLN02910 461 LNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETCKESFHRFDKYLNFSNPKISENFDPNACGWA 540 (657)
T ss_pred HHHHHHHHHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecccchhhhhhhhhhccCChhhhhccCCCCceee
Confidence 47999999997 679999999999999999999999873 445432 235667
Q ss_pred ceEEEEecCHHHHHHHHHHHH---h-cCCCCCCChhHHH---Hhcc-cceecCCccCccccccCCChHHHHhhhhcccCC
Q 006648 429 SGVMVIEPSSCTFQLLMDHIN---E-FESYNGGDQGYLN---EVFT-WWHRIPKHMNFLKHFWFGDEEEVKQKKTRLFGA 500 (637)
Q Consensus 429 SGVMVInPs~~~fe~L~e~l~---~-~~sy~~~DQdiLN---~vF~-~w~~LP~rYN~l~~~w~~~~~~~~~~k~e~f~~ 500 (637)
+|||||+...++.+.+.+.+. + .......|||.|| .+|. .+..|+.+||.+...+. +..+..
T Consensus 541 sGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~dqgsLPpgLLvF~g~i~pLD~rWNv~GLGyd----------~~v~~~ 610 (657)
T PLN02910 541 FGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGLITFYNLTYPLDRSWHVLGLGYD----------PALNQT 610 (657)
T ss_pred cccEEEeHHHHHHhhHHHHHHHHHHhcccccccccCCCChHHHHHhCceeecCchheecCCCCC----------cccccc
Confidence 799999999998777655332 2 3456678999999 5676 89999999999753321 112223
Q ss_pred CCCCeEEEEecC-CCCCCCC
Q 006648 501 DPPILYVLHYLG-MKPWLCF 519 (637)
Q Consensus 501 ~~~~~kIIHF~G-~KPW~~~ 519 (637)
...++.||||+| .|||...
T Consensus 611 ~i~~AAVLHynG~~KPWl~l 630 (657)
T PLN02910 611 EIENAAVVHYNGNYKPWLDL 630 (657)
T ss_pred cccCcEEEEeCCCCCccccc
Confidence 456799999999 9999854
No 23
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.66 E-value=1.1e-17 Score=172.98 Aligned_cols=200 Identities=25% Similarity=0.435 Sum_probs=139.6
Q ss_pred CCCCEEEEEEeecCcchHHHHHHHHHHHHHhCC-CCcE-EEEEcCCCCHHHHHHHHHcCCEEEEEeeccCC----c--cc
Q 006648 301 SVHREAYATILHSAHVYVCGAIAAAQSIRMSGS-TRDL-VILVDETISAYHRSGLEAAGWKVRTIQRIRNP----K--AE 372 (637)
Q Consensus 301 ~~~R~AYVTlLtsdd~YL~gAiVL~~SLr~~ns-~~dl-VILvtd~ISee~r~~Lk~~g~~V~~I~~I~~P----~--~~ 372 (637)
....+|+++.++..|-|+....++++-|.+.+. +..+ ++|..+++.+-..+.|...|..+..|++|... + ..
T Consensus 67 ~ng~~al~n~~t~~d~y~N~Tr~lv~~Lk~~~etkaKlV~vL~mkg~d~wk~d~l~ldga~~~~vq~i~~hevv~~~~di 146 (368)
T COG5597 67 TNGDYALGNRATLRDIYLNRTRALVVVLKTGGETKAKLVEVLTMKGCDLWKTDLLPLDGAFNARVQRINVHEVVPFTKDI 146 (368)
T ss_pred hcCcccccchhhhhceeecccceehhhhhhcCcchhheeeehhhcccchhhhhccccchHHHHHhccchHhhhhhhhhcc
Confidence 456788888776555555558888898888763 3444 55666778777777777666655555544321 1 11
Q ss_pred cccccch--hHHHHHHcccCCCceEEEecccccccCCchhhhCCC--CeeeecC--------------------------
Q 006648 373 KDAYNEW--NYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMP--EISATGN-------------------------- 422 (637)
Q Consensus 373 ~~~~~~~--tysKL~Iw~LtdYDRVLYLDAD~LVL~nLDeLFdlp--~IaAv~D-------------------------- 422 (637)
+....+| +|+||++|+++|||||||||+|.||++|||+||++| +++|.+|
T Consensus 147 ~~~~~rw~~mftKLrVfeqtEyDRvifLDsDaivlknmDklFd~Pvyef~a~pD~~~sp~~fhrp~~~i~~~ft~~faay 226 (368)
T COG5597 147 KPDFHRWLDMFTKLRVFEQTEYDRVIFLDSDAIVLKNMDKLFDYPVYEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAY 226 (368)
T ss_pred CcCcCcHHHHhHHHHhhhhhhhceEEEeccchHHhhhhHHHhcchhhhhccCCchhhCHHHhcCCCCccceeecHHHHhh
Confidence 1223444 799999999999999999999999999999999987 4333210
Q ss_pred ----------------------------CCCcccceEEEEecCHHHHHHHHHHHH-hc-CCCCCCChhHHHHhcc-----
Q 006648 423 ----------------------------NGTMFNSGVMVIEPSSCTFQLLMDHIN-EF-ESYNGGDQGYLNEVFT----- 467 (637)
Q Consensus 423 ----------------------------~~~yFNSGVMVInPs~~~fe~L~e~l~-~~-~sy~~~DQdiLN~vF~----- 467 (637)
...+||||+||++|++.-+.+++..+- +. ...+-..|.++|..|+
T Consensus 227 g~~r~~ly~Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm~riv~~alPklydda~mmeqsllnlaYn~~g~F 306 (368)
T COG5597 227 GKMRAALYAPYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHMLRIVWFALPKLYDDADMMEQSLLNLAYNYEGFF 306 (368)
T ss_pred cccHhhhccccccccccCCcccccCCCcHhhhhccCceeecchHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHhhhccC
Confidence 135799999999999999999887652 11 1112236899998877
Q ss_pred cceecCCccCccccccCCChHHHHhhhhcccCCCCCCeEEEEecCCCCCCCC
Q 006648 468 WWHRIPKHMNFLKHFWFGDEEEVKQKKTRLFGADPPILYVLHYLGMKPWLCF 519 (637)
Q Consensus 468 ~w~~LP~rYN~l~~~w~~~~~~~~~~k~e~f~~~~~~~kIIHF~G~KPW~~~ 519 (637)
-|.++..+|| ++|..+.+ .+-.+.+|+ |||+..
T Consensus 307 Pwerld~~yN---G~wa~~nd-------------lPylka~Hg---K~W~y~ 339 (368)
T COG5597 307 PWERLDPRYN---GYWADAND-------------LPYLKAWHG---KPWFYT 339 (368)
T ss_pred chhhcCcccc---cccccccc-------------cchHHHhhc---CcCCCC
Confidence 4788999999 67754321 233566776 999954
No 24
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=98.09 E-value=1.9e-05 Score=82.26 Aligned_cols=112 Identities=16% Similarity=0.220 Sum_probs=78.9
Q ss_pred CcchHHHHHHHHHHHHHhCCCCcEEEEEc--CCCCHHHHHHHHH-cCCEEEEEeeccCCcccccccc-chhHHHHHHccc
Q 006648 314 AHVYVCGAIAAAQSIRMSGSTRDLVILVD--ETISAYHRSGLEA-AGWKVRTIQRIRNPKAEKDAYN-EWNYSKFRLWQL 389 (637)
Q Consensus 314 dd~YL~gAiVL~~SLr~~ns~~dlVILvt--d~ISee~r~~Lk~-~g~~V~~I~~I~~P~~~~~~~~-~~tysKL~Iw~L 389 (637)
++.|+..|..++..||..|++.||-|++. ++++++.++.|.. .....+.+..+..+........ ..-..|.++--.
T Consensus 9 g~~~~~~a~~lI~~LR~~g~~LPIEI~~~~~~dl~~~~~~~l~~~q~v~~vd~~~~~~~~~~~~~~~~~~~~~K~lA~l~ 88 (271)
T PF11051_consen 9 GDKYLWLALRLIRVLRRLGNTLPIEIIYPGDDDLSKEFCEKLLPDQDVWFVDASCVIDPDYLGKSFSKKGFQNKWLALLF 88 (271)
T ss_pred cCccHHHHHHHHHHHHHhCCCCCEEEEeCCccccCHHHHHHHhhhhhhheecceEEeeccccccccccCCchhhhhhhhh
Confidence 45899999999999999999999977765 7899999888876 2222333332222221111111 011245555556
Q ss_pred CCCceEEEecccccccCCchhhhCCCCeeeecCCCCcccceEEEE
Q 006648 390 TDYDKIIFIDADLLILRNIDFLFGMPEISATGNNGTMFNSGVMVI 434 (637)
Q Consensus 390 tdYDRVLYLDAD~LVL~nLDeLFdlp~IaAv~D~~~yFNSGVMVI 434 (637)
..++.||+||||.|.+.|++.||+.+. |-.+|.++.
T Consensus 89 ssFeevllLDaD~vpl~~p~~lF~~~~---------yk~tG~lfw 124 (271)
T PF11051_consen 89 SSFEEVLLLDADNVPLVDPEKLFESEE---------YKKTGALFW 124 (271)
T ss_pred CCcceEEEEcCCcccccCHHHHhcCcc---------ccccCEEEE
Confidence 899999999999999999999998654 667777777
No 25
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=97.68 E-value=0.00027 Score=70.01 Aligned_cols=122 Identities=23% Similarity=0.343 Sum_probs=74.3
Q ss_pred CCHHHHHHHHHcCCEEEEEeeccCCcc-c-----cccccchhHHHHHHcc-c--CCCceEEEecccccccCCchhhhCCC
Q 006648 345 ISAYHRSGLEAAGWKVRTIQRIRNPKA-E-----KDAYNEWNYSKFRLWQ-L--TDYDKIIFIDADLLILRNIDFLFGMP 415 (637)
Q Consensus 345 ISee~r~~Lk~~g~~V~~I~~I~~P~~-~-----~~~~~~~tysKL~Iw~-L--tdYDRVLYLDAD~LVL~nLDeLFdlp 415 (637)
+.++..+.|++.|..+..+.....+.. . ...+...++.|..+-. + ..| .|+|+|+|++.++|+.++|+.+
T Consensus 11 ~D~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~L~~G~-~vl~~D~Dvv~~~dp~~~~~~~ 89 (212)
T PF03407_consen 11 LDEETYDALEELGPPCFYFPSDASESEDSAFRFGSKAFQKLTWLKPKVLLDLLELGY-DVLFSDADVVWLRDPLPYFENP 89 (212)
T ss_pred ECHHHHHHHHhcCCCeEEEecccccccchhhhcCCHHHHHHHHHHHHHHHHHHHcCC-ceEEecCCEEEecCcHHhhccC
Confidence 346777888888877554432211111 0 1122234566665543 2 344 5999999999999999999333
Q ss_pred --CeeeecC---------CCCcccceEEEEecCHHHHHHHHHHHHhcCC-CCCCChhHHHHhcc
Q 006648 416 --EISATGN---------NGTMFNSGVMVIEPSSCTFQLLMDHINEFES-YNGGDQGYLNEVFT 467 (637)
Q Consensus 416 --~IaAv~D---------~~~yFNSGVMVInPs~~~fe~L~e~l~~~~s-y~~~DQdiLN~vF~ 467 (637)
++....| ....+|+|+|.++++..+..-+.+.+..... -...||.++|.++.
T Consensus 90 ~~Di~~~~d~~~~~~~~~~~~~~n~G~~~~r~t~~~~~~~~~w~~~~~~~~~~~DQ~~~n~~l~ 153 (212)
T PF03407_consen 90 DADILFSSDGWDGTNSDRNGNLVNTGFYYFRPTPRTIAFLEDWLERMAESPGCWDQQAFNELLR 153 (212)
T ss_pred CCceEEecCCCcccchhhcCCccccceEEEecCHHHHHHHHHHHHHHHhCCCcchHHHHHHHHH
Confidence 2333322 2345799999999998775544433322111 12359999999987
No 26
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=94.50 E-value=0.27 Score=60.50 Aligned_cols=171 Identities=18% Similarity=0.194 Sum_probs=105.7
Q ss_pred EEEEEeecCcchHHHHHHHHHHHHHh-CCCCcEEEEEcCCCCHHHHHHH----HHcCCEEEEEeeccCCccccc----cc
Q 006648 306 AYATILHSAHVYVCGAIAAAQSIRMS-GSTRDLVILVDETISAYHRSGL----EAAGWKVRTIQRIRNPKAEKD----AY 376 (637)
Q Consensus 306 AYVTlLtsdd~YL~gAiVL~~SLr~~-ns~~dlVILvtd~ISee~r~~L----k~~g~~V~~I~~I~~P~~~~~----~~ 376 (637)
.=+.-+++++-|-.-..+++.|+.++ ++...|-+| ..-+|+.-++.+ ++++.+..-|+. ..|.-.+. ..
T Consensus 1182 INIFSvASGHLYERflrIMm~SvlknTktpVKFWfL-kNyLSPtFKe~iP~mA~eYnFeyElv~Y-kWPrWLhqQ~EKQR 1259 (1470)
T KOG1879|consen 1182 INIFSVASGHLYERFLRIMMLSVLKNTKTPVKFWFL-KNYLSPTFKESIPHMAKEYNFEYELVQY-KWPRWLHQQTEKQR 1259 (1470)
T ss_pred EEEEeeccccHHHHHHHHHHHHHHhCCCCceeEEee-hhhcChHHHHHHHHHHHHhCceEEEEEe-cCchhhhhhhhhhh
Confidence 33444666789999999999999874 344444444 446777665544 456666655542 22322111 01
Q ss_pred cchhHHHHHHccc--CCCceEEEecccccccCCchhhhCCCCeee----ec--------C---------------CCCcc
Q 006648 377 NEWNYSKFRLWQL--TDYDKIIFIDADLLILRNIDFLFGMPEISA----TG--------N---------------NGTMF 427 (637)
Q Consensus 377 ~~~tysKL~Iw~L--tdYDRVLYLDAD~LVL~nLDeLFdlp~IaA----v~--------D---------------~~~yF 427 (637)
-.|.|--|++=-| ...+||||+|||-||..||+||.+++.=+| +| | ...|-
T Consensus 1260 iiWgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~GaPygYtPfCdsR~EMDGyRFWK~GYW~~hL~grkYH 1339 (1470)
T KOG1879|consen 1260 IIWGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFDLGGAPYGYTPFCDSRREMDGYRFWKQGYWKKHLRGRKYH 1339 (1470)
T ss_pred hhhhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHhcccCCCccccCccccccccccchhHHhhhHHHHHhccCccc
Confidence 1244444444333 478999999999999999999988874221 21 1 23566
Q ss_pred cceEEEEecCHHH----HHHHH---HHHH-hcCCCCCCChhHHHHhcc--cceecCCccCc
Q 006648 428 NSGVMVIEPSSCT----FQLLM---DHIN-EFESYNGGDQGYLNEVFT--WWHRIPKHMNF 478 (637)
Q Consensus 428 NSGVMVInPs~~~----fe~L~---e~l~-~~~sy~~~DQdiLN~vF~--~w~~LP~rYN~ 478 (637)
=|.+.|+++..-+ -+++. +.+. ...+...-|||+-|.+-+ .++.||-.|=.
T Consensus 1340 ISALYVVDLkrFReiaAGDrLR~qYQ~LS~DPNSLsNLDQDLPNnm~hqVpIkSLPqeWLW 1400 (1470)
T KOG1879|consen 1340 ISALYVVDLKRFREIAAGDRLRGQYQALSQDPNSLSNLDQDLPNNMQHQVPIKSLPQEWLW 1400 (1470)
T ss_pred cceeeeeeHHHHHhcccchHHHHHHHhhcCCcchhhhccccccccceeecccccCCcchhh
Confidence 7888888874311 11222 2221 244666679999999987 68889887544
No 27
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=94.33 E-value=0.58 Score=52.02 Aligned_cols=131 Identities=22% Similarity=0.416 Sum_probs=77.2
Q ss_pred HcccCCCceEEEecccccccCCchhhhCCCC--ee---ee--c--------CCCCcccceEEEEecCHHHHHHHHHHH--
Q 006648 386 LWQLTDYDKIIFIDADLLILRNIDFLFGMPE--IS---AT--G--------NNGTMFNSGVMVIEPSSCTFQLLMDHI-- 448 (637)
Q Consensus 386 Iw~LtdYDRVLYLDAD~LVL~nLDeLFdlp~--Ia---Av--~--------D~~~yFNSGVMVInPs~~~fe~L~e~l-- 448 (637)
+-..+++|=|-|||+|+||+. + -|++|. +. .+ + ..-..+|+|+++|+.+++..+-|-..+
T Consensus 192 M~~~PeaEWiWWLDsDALImN-m--sfelPlery~~~NlVihg~~~~l~~~kdW~GLNtGsFLIRNcqWSldlLDaWa~m 268 (429)
T PLN03182 192 MLAHPEVEWIWWMDSDALFTD-M--TFEIPLEKYEGYNLVIHGWDELVYDQKSWIGLNTGSFLIRNCQWSLDLLDAWAPM 268 (429)
T ss_pred HHHCCCceEEEEecCCceeec-C--CCCCCHhHcCCcCeeeccchhhheeccccCccceeeEEEEcCHHHHHHHHHHHhc
Confidence 334578999999999999985 2 344441 10 01 0 123579999999999988765442211
Q ss_pred ------------------HhcCCCCCCChhHHHHhcc----cce---ecCCccCccccccCCC---hHHH-HhhhhcccC
Q 006648 449 ------------------NEFESYNGGDQGYLNEVFT----WWH---RIPKHMNFLKHFWFGD---EEEV-KQKKTRLFG 499 (637)
Q Consensus 449 ------------------~~~~sy~~~DQdiLN~vF~----~w~---~LP~rYN~l~~~w~~~---~~~~-~~~k~e~f~ 499 (637)
.....+...||..|-++.. .|. .|-..|-+ .++|..- .++. ..+.. -++
T Consensus 269 gp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~kv~le~~y~l-~Gyw~~iv~~yee~~~~~~~-g~g 346 (429)
T PLN03182 269 GPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDKVYLENSYYL-HGYWVGLVDRYEEMMEKYHP-GLG 346 (429)
T ss_pred CCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccceEEeeccee-ccccHHHHHHHHHHHHhcCC-CCC
Confidence 1123455679999999874 342 45555544 2455321 0111 11110 112
Q ss_pred CCCCCeEEEEecCCCCCCCCCCC
Q 006648 500 ADPPILYVLHYLGMKPWLCFRDY 522 (637)
Q Consensus 500 ~~~~~~kIIHF~G~KPW~~~~~y 522 (637)
+-.-+.|.||+|-||-....+|
T Consensus 347 -d~rwPfvtHF~GckpC~~~~~y 368 (429)
T PLN03182 347 -DDRWPFVTHFVGCKPCGGYGDY 368 (429)
T ss_pred -CcccceeEeeccceecCCCCCc
Confidence 1235899999999998765544
No 28
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=93.03 E-value=0.48 Score=52.18 Aligned_cols=185 Identities=13% Similarity=0.196 Sum_probs=97.5
Q ss_pred cCccccccccccccC-CCCCCCCCCEEEEEEeecCcchHHHHHHHHHHHHHhCCCCcEEEEEcC-CCCH--HHHHHHHHc
Q 006648 281 PVGSCELALPLRDKD-RVYSGSVHREAYATILHSAHVYVCGAIAAAQSIRMSGSTRDLVILVDE-TISA--YHRSGLEAA 356 (637)
Q Consensus 281 pvgsc~la~pl~~~~-~~~s~~~~R~AYVTlLtsdd~YL~gAiVL~~SLr~~ns~~dlVILvtd-~ISe--e~r~~Lk~~ 356 (637)
=++||..+++.+.-. ..+..+-+...+.|-......+=.--.-.+.|+.+++|+..++|+... +.++ ...+-+-..
T Consensus 105 ~~~s~~~~~sf~~~~~~~~~~~c~~~~fm~w~S~~~~f~~r~~~sIESa~k~hP~~cv~vls~t~ds~~~~s~~kp~~~~ 184 (409)
T KOG1928|consen 105 NLSSELKSPSFQSRVNSFFRKECSVRFFMTWISPAESFGVREMCSIESAFKTHPEGCVVVLSKTMDSPNGYSILKPFLDS 184 (409)
T ss_pred eccccccCcccCCCcchhhccCCceeEEEEecccccCCChhhhhhhHHHHhhCCCceEEEEEccccCCCCccccccHhHh
Confidence 346777776664432 223333344444544443333333345578999999999999888542 1111 122333333
Q ss_pred CCEEEEEeeccCCcccc------------c-c-----c----cchhHHHHHH-cccCCCceEEEecccccccCCchhhhC
Q 006648 357 GWKVRTIQRIRNPKAEK------------D-A-----Y----NEWNYSKFRL-WQLTDYDKIIFIDADLLILRNIDFLFG 413 (637)
Q Consensus 357 g~~V~~I~~I~~P~~~~------------~-~-----~----~~~tysKL~I-w~LtdYDRVLYLDAD~LVL~nLDeLFd 413 (637)
|..+..+.+ +.|...+ + . + +-..+.||.+ |.... ||||+|+||+++|..|=+
T Consensus 185 ~lsv~~v~~-~lp~llk~t~~e~~l~~~k~g~~~~~~~~l~~~lSdl~RLA~LyKYGG----vYLDTDvIvLksl~~l~N 259 (409)
T KOG1928|consen 185 GLSVIAVTP-DLPFLLKDTPGETWLERWKDGRLDPGKIPLLQNLSDLSRLALLYKYGG----VYLDTDVIVLKSLSNLRN 259 (409)
T ss_pred hhhhccccc-CchhhHhhCccccHHHHHHhcccCCCcccchhhHHHHHHHHHHHHhCC----EEeeccEEEecccccccc
Confidence 444443322 1111110 0 0 0 0123556543 55444 899999999999998865
Q ss_pred CCCeeeecCCCCcccceEEEEecCHHHHH-HHHHHHHhc--CCCCCCChhHHHHhcccce
Q 006648 414 MPEISATGNNGTMFNSGVMVIEPSSCTFQ-LLMDHINEF--ESYNGGDQGYLNEVFTWWH 470 (637)
Q Consensus 414 lp~IaAv~D~~~yFNSGVMVInPs~~~fe-~L~e~l~~~--~sy~~~DQdiLN~vF~~w~ 470 (637)
.=...++.....+.|.+||.+++....-. .|-|+.... ..+...-.+++-.++++|.
T Consensus 260 ~ig~~~~~~~~~~lnnavl~F~k~Hpfl~~cl~eF~~tfNg~~WG~NGP~LvTRVakr~c 319 (409)
T KOG1928|consen 260 VIGVDPATQAWTRLNNAVLIFDKNHPFLLECLREFALTYNGNIWGHNGPYLVTRVAKRWC 319 (409)
T ss_pred cccccchhhHHHhhcCceeecCCCCHHHHHHHHHHHHhccccccccCCcHHHHHHHHHHh
Confidence 31111111245689999999999765443 444444331 1122223457777777443
No 29
>PLN03181 glycosyltransferase; Provisional
Probab=89.55 E-value=2.8 Score=46.99 Aligned_cols=97 Identities=16% Similarity=0.232 Sum_probs=59.2
Q ss_pred hHHHHHH-----cccCCCceEEEecccccccCCchhhhCCCC-----eeee----c------CCCCcccceEEEEecCHH
Q 006648 380 NYSKFRL-----WQLTDYDKIIFIDADLLILRNIDFLFGMPE-----ISAT----G------NNGTMFNSGVMVIEPSSC 439 (637)
Q Consensus 380 tysKL~I-----w~LtdYDRVLYLDAD~LVL~nLDeLFdlp~-----IaAv----~------D~~~yFNSGVMVInPs~~ 439 (637)
.|.|+-+ -..++++-|-|||+|+||... -|.+|. +-.+ + ..-.-||+|+++|+.+++
T Consensus 182 ~WaKipalRaAM~a~PeAEWfWWLDsDALIMNp---~~sLPl~ry~~~NLvvhg~p~~vy~~qdw~GlN~GsFLIRNcqW 258 (453)
T PLN03181 182 YWAKLPVVRAAMLAHPEAEWIWWVDSDAVFTDM---DFKLPLHRYRDHNLVVHGWPKLIYEKRSWTALNAGVFLIRNCQW 258 (453)
T ss_pred hhhHHHHHHHHHHHCCCceEEEEecCCceeecC---CCCCCHhhcCCccccccCCcccccccccccccceeeeEEecCHH
Confidence 4555543 345889999999999999854 223331 1111 1 134679999999999887
Q ss_pred HHHHHHHHH--------------------HhcCCCCCCChhHHHHhcc----cce---ecCCccCcc
Q 006648 440 TFQLLMDHI--------------------NEFESYNGGDQGYLNEVFT----WWH---RIPKHMNFL 479 (637)
Q Consensus 440 ~fe~L~e~l--------------------~~~~sy~~~DQdiLN~vF~----~w~---~LP~rYN~l 479 (637)
..+-|-... .....+.-.||..|-++.- +|. .|-..|-+.
T Consensus 259 Sl~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyll~~~~~~w~~k~ylE~~yy~~ 325 (453)
T PLN03181 259 SLDFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYLLYKHKEKWGDKIYLEGEYYFE 325 (453)
T ss_pred HHHHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHHHHhccchhccceeeecceeee
Confidence 655432211 1122344569999988754 343 466666553
No 30
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=76.62 E-value=11 Score=36.79 Aligned_cols=82 Identities=20% Similarity=0.080 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHhCCC-CcE-EEEEcCCCCHHHHHHHHHcCCEEEEEeeccCCccccccccchhHHHHHHcccCCCceEEE
Q 006648 320 GAIAAAQSIRMSGST-RDL-VILVDETISAYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIF 397 (637)
Q Consensus 320 gAiVL~~SLr~~ns~-~dl-VILvtd~ISee~r~~Lk~~g~~V~~I~~I~~P~~~~~~~~~~tysKL~Iw~LtdYDRVLY 397 (637)
.+.-++.||.+.... .++ +|+++++-+++..+.+++...+...|..+..+.... ....-...+...+|-|++
T Consensus 14 ~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~~~~~~v~~i~~~~~~~------~~a~N~g~~~a~~d~v~~ 87 (249)
T cd02525 14 YIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYAAKDPRIRLIDNPKRIQ------SAGLNIGIRNSRGDIIIR 87 (249)
T ss_pred hHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHHhcCCeEEEEeCCCCCc------hHHHHHHHHHhCCCEEEE
Confidence 345557777765431 333 444566656666666665543211122222221110 112223334457899999
Q ss_pred ecccccccCC
Q 006648 398 IDADLLILRN 407 (637)
Q Consensus 398 LDAD~LVL~n 407 (637)
+|+|.++..+
T Consensus 88 lD~D~~~~~~ 97 (249)
T cd02525 88 VDAHAVYPKD 97 (249)
T ss_pred ECCCccCCHH
Confidence 9999987544
No 31
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=76.17 E-value=2.5 Score=43.72 Aligned_cols=87 Identities=17% Similarity=0.275 Sum_probs=16.8
Q ss_pred hHHHHHHc-----ccCCCceEEEecccccccCCchhhhC-------CCC-------------e-e--ee--c--------
Q 006648 380 NYSKFRLW-----QLTDYDKIIFIDADLLILRNIDFLFG-------MPE-------------I-S--AT--G-------- 421 (637)
Q Consensus 380 tysKL~Iw-----~LtdYDRVLYLDAD~LVL~nLDeLFd-------lp~-------------I-a--Av--~-------- 421 (637)
+|.|+.+- ..++++=|+|||+|+||...=-.|.+ ++. + . .. +
T Consensus 60 ~W~K~~~lr~~m~~~P~~~wv~~lD~Dali~n~~~~L~~~il~p~~L~~~~~r~~~~~p~~~~~~~~~~~~~~~~~li~t 139 (239)
T PF05637_consen 60 SWAKIPALRAAMKKYPEAEWVWWLDSDALIMNPDFSLEEHILSPSRLDSLLLRDVPIVPPDSIIKTYSVIDGNDIHLIIT 139 (239)
T ss_dssp HHTHHHHHHHHHHH-TT-SEEEEE-TTEEE--------------------------------------------------
T ss_pred hhHHHHHHHHHHHhCCCCCEEEEEcCCeEEEecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 45665443 33788999999999999874222221 000 0 0 00 0
Q ss_pred CCCCcccceEEEEecCHHHHHHHHHHHHh----cCCC---CCCChhHHHHhcc
Q 006648 422 NNGTMFNSGVMVIEPSSCTFQLLMDHINE----FESY---NGGDQGYLNEVFT 467 (637)
Q Consensus 422 D~~~yFNSGVMVInPs~~~fe~L~e~l~~----~~sy---~~~DQdiLN~vF~ 467 (637)
.....+|+|+++++.+.+... +++.... .... .+.||..|-.++.
T Consensus 140 ~d~~gLNtGsFliRns~ws~~-fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~ 191 (239)
T PF05637_consen 140 QDWNGLNTGSFLIRNSPWSRD-FLDAWADPLYRNYDWDQLEFDEQSALEHLLQ 191 (239)
T ss_dssp -----------------------------------------------------
T ss_pred ccccccccccccccccccccc-ccccccccccccccccccccccccccccccc
Confidence 134679999999999888764 4444322 1122 3679999998887
No 32
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=75.11 E-value=20 Score=38.17 Aligned_cols=165 Identities=10% Similarity=0.025 Sum_probs=86.2
Q ss_pred CCCCEEEEEEeecCcchHHHHHHHHHHHHHhC-CCCc--EEEEEcCC--CCHHHHHHHHHcCCEEEEEeeccCCcccccc
Q 006648 301 SVHREAYATILHSAHVYVCGAIAAAQSIRMSG-STRD--LVILVDET--ISAYHRSGLEAAGWKVRTIQRIRNPKAEKDA 375 (637)
Q Consensus 301 ~~~R~AYVTlLtsdd~YL~gAiVL~~SLr~~n-s~~d--lVILvtd~--ISee~r~~Lk~~g~~V~~I~~I~~P~~~~~~ 375 (637)
...+.+...+.+ ..|+.-.--.+.|-.++- ++++ ++|+.|+. ++.-....+ ...+++.|. . ...
T Consensus 32 ~n~tIgl~vfat--GkY~~f~~~F~~SAEk~Fm~g~~v~YyVFTD~~~~~p~v~lg~~--r~~~V~~v~-----~--~~~ 100 (271)
T cd02515 32 QNITIGLTVFAV--GKYTEFLERFLESAEKHFMVGYRVIYYIFTDKPAAVPEVELGPG--RRLTVLKIA-----E--ESR 100 (271)
T ss_pred cCCEEEEEEEEe--ccHHHHHHHHHHHHHHhccCCCeeEEEEEeCCcccCcccccCCC--ceeEEEEec-----c--ccC
Confidence 345566555454 379887777888887762 4444 45554422 111000000 012222221 1 122
Q ss_pred ccchhHHHHHHc-----cc--CCCceEEEecccccccCCch-hhhCCCCeee------------------------ec-C
Q 006648 376 YNEWNYSKFRLW-----QL--TDYDKIIFIDADLLILRNID-FLFGMPEISA------------------------TG-N 422 (637)
Q Consensus 376 ~~~~tysKL~Iw-----~L--tdYDRVLYLDAD~LVL~nLD-eLFdlp~IaA------------------------v~-D 422 (637)
+...+..|+.++ ++ .++|-+.++|+|+++.+++. |.+. +.++. ++ +
T Consensus 101 W~~~sl~Rm~~~~~~~~~~~~~e~DYlF~~dvd~~F~~~ig~E~Lg-~lva~lHp~~y~~~~~~fpYERrp~S~AyIp~~ 179 (271)
T cd02515 101 WQDISMRRMKTLADHIADRIGHEVDYLFCMDVDMVFQGPFGVETLG-DSVAQLHPWWYGKPRKQFPYERRPSSAAYIPEG 179 (271)
T ss_pred CcHHHHHHHHHHHHHHHHhhcccCCEEEEeeCCceEeecCCHHHhh-hhheecChhhhcCCCCCCCCcCCCCccccccCC
Confidence 334466677666 22 48999999999999999876 3332 11111 11 1
Q ss_pred -CCCcccceEEEEecCHHHHHHHHHHHH--------hcCCCCCCChhHHHHhcc---cceecCCccCcc
Q 006648 423 -NGTMFNSGVMVIEPSSCTFQLLMDHIN--------EFESYNGGDQGYLNEVFT---WWHRIPKHMNFL 479 (637)
Q Consensus 423 -~~~yFNSGVMVInPs~~~fe~L~e~l~--------~~~sy~~~DQdiLN~vF~---~w~~LP~rYN~l 479 (637)
..-|+-+|+.-=.+ ..+-+|.+.+. +.-.-...|..-||.+|- ..+.|++.|+.-
T Consensus 180 eGdfYy~Ga~~GG~~--~~vl~l~~~c~~~i~~D~~n~I~A~wHDESHLNkYf~~~Kp~KiLSPeY~w~ 246 (271)
T cd02515 180 EGDFYYHGAVFGGSV--EEVYRLTRACHEGILADKANGIEARWHDESHLNKYFLLHKPTKVLSPEYLWD 246 (271)
T ss_pred CCCeEEeeeecCccH--HHHHHHHHHHHHHHHHHHhCCceEEeecHhHhHHHHhhCCCCeecChhhcCC
Confidence 12344444432222 22223333221 111114689999999987 378899998863
No 33
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=73.74 E-value=22 Score=30.75 Aligned_cols=83 Identities=18% Similarity=0.087 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHhCC-CCcEEEEEcCCCCHHHHHHHHHcCCE---EEEEeeccCCccccccccchhHHHHHHcccCCCc
Q 006648 318 VCGAIAAAQSIRMSGS-TRDLVILVDETISAYHRSGLEAAGWK---VRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYD 393 (637)
Q Consensus 318 L~gAiVL~~SLr~~ns-~~dlVILvtd~ISee~r~~Lk~~g~~---V~~I~~I~~P~~~~~~~~~~tysKL~Iw~LtdYD 393 (637)
......++.|+.+... .+.++| ++++-+++..+.+.+.... +..+...... .....+-.+....++|
T Consensus 9 ~~~l~~~l~s~~~~~~~~~~i~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~~~~d 79 (156)
T cd00761 9 EPYLERCLESLLAQTYPNFEVIV-VDDGSTDGTLEILEEYAKKDPRVIRVINEENQ--------GLAAARNAGLKAARGE 79 (156)
T ss_pred HHHHHHHHHHHHhCCccceEEEE-EeCCCCccHHHHHHHHHhcCCCeEEEEecCCC--------ChHHHHHHHHHHhcCC
Confidence 4566778888887663 445554 4555555555555544322 2222111110 0112222333334789
Q ss_pred eEEEecccccccCCch
Q 006648 394 KIIFIDADLLILRNID 409 (637)
Q Consensus 394 RVLYLDAD~LVL~nLD 409 (637)
.++++|+|.++..+.-
T Consensus 80 ~v~~~d~D~~~~~~~~ 95 (156)
T cd00761 80 YILFLDADDLLLPDWL 95 (156)
T ss_pred EEEEECCCCccCccHH
Confidence 9999999999977643
No 34
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=72.65 E-value=23 Score=31.46 Aligned_cols=80 Identities=13% Similarity=0.070 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHhC-CCCcEEEEEcCCCCHHHHHHHHHcCCE----EEEEeeccCCccccccccchhHHHHHHcccCCCc
Q 006648 319 CGAIAAAQSIRMSG-STRDLVILVDETISAYHRSGLEAAGWK----VRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYD 393 (637)
Q Consensus 319 ~gAiVL~~SLr~~n-s~~dlVILvtd~ISee~r~~Lk~~g~~----V~~I~~I~~P~~~~~~~~~~tysKL~Iw~LtdYD 393 (637)
....-++.||.... +..+++| ++++-++.+.+.+++.... +..+. .+.... ..-.+-...+....|
T Consensus 10 ~~l~~~l~sl~~q~~~~~~iiv-vdd~s~d~t~~~~~~~~~~~~~~~~~~~---~~~~~g-----~~~~~n~~~~~~~~~ 80 (180)
T cd06423 10 AVIERTIESLLALDYPKLEVIV-VDDGSTDDTLEILEELAALYIRRVLVVR---DKENGG-----KAGALNAGLRHAKGD 80 (180)
T ss_pred HHHHHHHHHHHhCCCCceEEEE-EeCCCccchHHHHHHHhccccceEEEEE---ecccCC-----chHHHHHHHHhcCCC
Confidence 44556678887654 3445444 5555566666666654332 21111 111100 011222333444789
Q ss_pred eEEEecccccccCC
Q 006648 394 KIIFIDADLLILRN 407 (637)
Q Consensus 394 RVLYLDAD~LVL~n 407 (637)
-|+++|+|.++-.+
T Consensus 81 ~i~~~D~D~~~~~~ 94 (180)
T cd06423 81 IVVVLDADTILEPD 94 (180)
T ss_pred EEEEECCCCCcChH
Confidence 99999999999765
No 35
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=71.96 E-value=22 Score=35.24 Aligned_cols=100 Identities=15% Similarity=0.119 Sum_probs=52.4
Q ss_pred CCCEEEEEEeecCcchHHHHHHHHHHHHHhC-CCCcE-EEEEcCCCCHHHHHHHHHcCCE-EEEEeeccCCccccccccc
Q 006648 302 VHREAYATILHSAHVYVCGAIAAAQSIRMSG-STRDL-VILVDETISAYHRSGLEAAGWK-VRTIQRIRNPKAEKDAYNE 378 (637)
Q Consensus 302 ~~R~AYVTlLtsdd~YL~gAiVL~~SLr~~n-s~~dl-VILvtd~ISee~r~~Lk~~g~~-V~~I~~I~~P~~~~~~~~~ 378 (637)
.++.+.+...+..+ ..+..+++||.... +...+ +|+++++-++...+.+++...+ +..+ ..+....
T Consensus 28 ~~~isVvip~~n~~---~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~v~~i---~~~~~~g----- 96 (251)
T cd06439 28 LPTVTIIIPAYNEE---AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYADKGVKLL---RFPERRG----- 96 (251)
T ss_pred CCEEEEEEecCCcH---HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHhhCcEEEE---EcCCCCC-----
Confidence 44566666555443 33456677776543 33223 4445666666666667665432 2222 1111100
Q ss_pred hhHHHHHHcccCCCceEEEecccccccCC-chhhh
Q 006648 379 WNYSKFRLWQLTDYDKIIFIDADLLILRN-IDFLF 412 (637)
Q Consensus 379 ~tysKL~Iw~LtdYDRVLYLDAD~LVL~n-LDeLF 412 (637)
....+-...+....|-|+++|+|+++..+ +..+.
T Consensus 97 ~~~a~n~gi~~a~~d~i~~lD~D~~~~~~~l~~l~ 131 (251)
T cd06439 97 KAAALNRALALATGEIVVFTDANALLDPDALRLLV 131 (251)
T ss_pred hHHHHHHHHHHcCCCEEEEEccccCcCHHHHHHHH
Confidence 11222233334456999999999999754 44443
No 36
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=70.86 E-value=37 Score=30.57 Aligned_cols=108 Identities=16% Similarity=0.152 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHhCC-CCcEEEEEcCCCCHHHHHHHHHcCCEEEEEeeccCCccccccccchhHHHHHHcccCCCceEE
Q 006648 318 VCGAIAAAQSIRMSGS-TRDLVILVDETISAYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKII 396 (637)
Q Consensus 318 L~gAiVL~~SLr~~ns-~~dlVILvtd~ISee~r~~Lk~~g~~V~~I~~I~~P~~~~~~~~~~tysKL~Iw~LtdYDRVL 396 (637)
.....-++.||..... ... +++++++-.++..+.+++....+..+ ..+... .....+-...+..+++-|+
T Consensus 9 ~~~l~~~l~sl~~~~~~~~~-iiivdd~s~~~~~~~~~~~~~~~~~~---~~~~~~-----g~~~a~n~~~~~~~~~~i~ 79 (166)
T cd04186 9 LEYLKACLDSLLAQTYPDFE-VIVVDNASTDGSVELLRELFPEVRLI---RNGENL-----GFGAGNNQGIREAKGDYVL 79 (166)
T ss_pred HHHHHHHHHHHHhccCCCeE-EEEEECCCCchHHHHHHHhCCCeEEE---ecCCCc-----ChHHHhhHHHhhCCCCEEE
Confidence 3445567778876543 344 44455666666667776655322222 111110 1122333444445899999
Q ss_pred EecccccccCC-chhhhC----CCCeeeecCCCCcccceEEEEecC
Q 006648 397 FIDADLLILRN-IDFLFG----MPEISATGNNGTMFNSGVMVIEPS 437 (637)
Q Consensus 397 YLDAD~LVL~n-LDeLFd----lp~IaAv~D~~~yFNSGVMVInPs 437 (637)
++|+|.++..+ +..+.+ .+.+.++... +.++.++++.+
T Consensus 80 ~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 122 (166)
T cd04186 80 LLNPDTVVEPGALLELLDAAEQDPDVGIVGPK---VSGAFLLVRRE 122 (166)
T ss_pred EECCCcEECccHHHHHHHHHHhCCCceEEEcc---CceeeEeeeHH
Confidence 99999998765 333332 1233333212 66777777644
No 37
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=69.41 E-value=14 Score=33.06 Aligned_cols=86 Identities=21% Similarity=0.276 Sum_probs=46.8
Q ss_pred chHHHHHHHHHHHHHh-CCCCcEEEEEcCCCCHHHHHHHHHc---CCEEEEEeeccCCccccccccchhHHHHHHcccCC
Q 006648 316 VYVCGAIAAAQSIRMS-GSTRDLVILVDETISAYHRSGLEAA---GWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTD 391 (637)
Q Consensus 316 ~YL~gAiVL~~SLr~~-ns~~dlVILvtd~ISee~r~~Lk~~---g~~V~~I~~I~~P~~~~~~~~~~tysKL~Iw~Ltd 391 (637)
.|+. -++.||++. ..... +++++++-+++..+.+++. +..+..+. .+... .....+-...+...
T Consensus 11 ~~l~---~~l~sl~~q~~~~~e-iivvdd~s~d~~~~~~~~~~~~~~~i~~i~---~~~n~-----g~~~~~n~~~~~a~ 78 (169)
T PF00535_consen 11 EYLE---RTLESLLKQTDPDFE-IIVVDDGSTDETEEILEEYAESDPNIRYIR---NPENL-----GFSAARNRGIKHAK 78 (169)
T ss_dssp TTHH---HHHHHHHHHSGCEEE-EEEEECS-SSSHHHHHHHHHCCSTTEEEEE---HCCCS-----HHHHHHHHHHHH--
T ss_pred HHHH---HHHHHHhhccCCCEE-EEEecccccccccccccccccccccccccc---ccccc-----cccccccccccccc
Confidence 5555 455666665 23333 4445555567777777765 33333332 11110 12234445556667
Q ss_pred CceEEEecccccccCC-chhhhC
Q 006648 392 YDKIIFIDADLLILRN-IDFLFG 413 (637)
Q Consensus 392 YDRVLYLDAD~LVL~n-LDeLFd 413 (637)
.+-|+++|+|.++..+ |..|.+
T Consensus 79 ~~~i~~ld~D~~~~~~~l~~l~~ 101 (169)
T PF00535_consen 79 GEYILFLDDDDIISPDWLEELVE 101 (169)
T ss_dssp SSEEEEEETTEEE-TTHHHHHHH
T ss_pred eeEEEEeCCCceEcHHHHHHHHH
Confidence 7799999999999988 666654
No 38
>PF07801 DUF1647: Protein of unknown function (DUF1647); InterPro: IPR012444 This entry consists of hypothetical proteins of unknown function.
Probab=67.65 E-value=31 Score=33.43 Aligned_cols=67 Identities=13% Similarity=0.144 Sum_probs=51.4
Q ss_pred CCCCCEEEEEEeecCcchHHHHHHHHHHHHHhCCCCcEEEEEcCCCCHHHHHHHHHc--CCEEEEEeeccCC
Q 006648 300 GSVHREAYATILHSAHVYVCGAIAAAQSIRMSGSTRDLVILVDETISAYHRSGLEAA--GWKVRTIQRIRNP 369 (637)
Q Consensus 300 ~~~~R~AYVTlLtsdd~YL~gAiVL~~SLr~~ns~~dlVILvtd~ISee~r~~Lk~~--g~~V~~I~~I~~P 369 (637)
...+..++||... ++++..+.-+++||++..|+.++++ ++=++++...+.|++. +.+++..+.-.-|
T Consensus 57 ~n~~~vvfVSa~S--~~h~~~~~~~i~si~~~~P~~k~il-Y~LgL~~~~i~~L~~~~~n~evr~Fn~s~YP 125 (142)
T PF07801_consen 57 KNSSDVVFVSATS--DNHFNESMKSISSIRKFYPNHKIIL-YDLGLSEEQIKKLKKNFCNVEVRKFNFSKYP 125 (142)
T ss_pred ccCCccEEEEEec--chHHHHHHHHHHHHHHHCCCCcEEE-EeCCCCHHHHHHHHhcCCceEEEECCCccCc
Confidence 3566788898553 5799999999999999999988765 6779999999999873 5666665443333
No 39
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=64.85 E-value=30 Score=34.11 Aligned_cols=21 Identities=14% Similarity=0.260 Sum_probs=17.0
Q ss_pred cccCCCceEEEecccccccCC
Q 006648 387 WQLTDYDKIIFIDADLLILRN 407 (637)
Q Consensus 387 w~LtdYDRVLYLDAD~LVL~n 407 (637)
.+..++|=|+++|+|+++-.+
T Consensus 83 ~~~a~~~~i~~~DaD~~~~~~ 103 (232)
T cd06437 83 MKVAKGEYVAIFDADFVPPPD 103 (232)
T ss_pred HHhCCCCEEEEEcCCCCCChH
Confidence 344689999999999998654
No 40
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=64.50 E-value=34 Score=31.85 Aligned_cols=85 Identities=12% Similarity=-0.027 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHh-CCCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEeeccCCccccccccchhHHHHHHcccCCCceEEE
Q 006648 319 CGAIAAAQSIRMS-GSTRDLVILVDETISAYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIF 397 (637)
Q Consensus 319 ~gAiVL~~SLr~~-ns~~dlVILvtd~ISee~r~~Lk~~g~~V~~I~~I~~P~~~~~~~~~~tysKL~Iw~LtdYDRVLY 397 (637)
..+..++.||... .++.. +|+++++-+++..+.+++...+++.+....+. . ....+-...+....|-|++
T Consensus 11 ~~l~~~l~sl~~q~~~~~e-vivvDd~s~d~~~~~~~~~~~~~~~~~~~~~~-g-------~~~a~n~~~~~a~~~~v~~ 81 (202)
T cd06433 11 ETLEETIDSVLSQTYPNIE-YIVIDGGSTDGTVDIIKKYEDKITYWISEPDK-G-------IYDAMNKGIALATGDIIGF 81 (202)
T ss_pred HHHHHHHHHHHhCCCCCce-EEEEeCCCCccHHHHHHHhHhhcEEEEecCCc-C-------HHHHHHHHHHHcCCCEEEE
Confidence 4455667777653 33333 44466666666667777665442222211111 0 1112223344456789999
Q ss_pred ecccccccCC-chhhh
Q 006648 398 IDADLLILRN-IDFLF 412 (637)
Q Consensus 398 LDAD~LVL~n-LDeLF 412 (637)
||+|.++..+ +..+.
T Consensus 82 ld~D~~~~~~~~~~~~ 97 (202)
T cd06433 82 LNSDDTLLPGALLAVV 97 (202)
T ss_pred eCCCcccCchHHHHHH
Confidence 9999998765 44443
No 41
>PRK15384 type III secretion system protein; Provisional
Probab=60.41 E-value=6.8 Score=41.17 Aligned_cols=47 Identities=15% Similarity=0.371 Sum_probs=36.7
Q ss_pred CceEEEecccccccCCchhhhCCCCeeeec---CCCCcccceEEEEecCH
Q 006648 392 YDKIIFIDADLLILRNIDFLFGMPEISATG---NNGTMFNSGVMVIEPSS 438 (637)
Q Consensus 392 YDRVLYLDAD~LVL~nLDeLFdlp~IaAv~---D~~~yFNSGVMVInPs~ 438 (637)
-+-+||||+|||+.+.|.-|+.-+.|+.-. +....+-.|.++++.+.
T Consensus 216 ~~GCIYLDaDMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsn 265 (336)
T PRK15384 216 NSGCIYLDADMIITEKLGGIYIPDGIAVHVERIDGRASMENGIIAVDRNN 265 (336)
T ss_pred CCceEEeeccceeecccccEEcCCceEEEEEecCCceecccceEEEccCC
Confidence 467999999999999999998877777532 34555667888888764
No 42
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=59.74 E-value=7.3 Score=40.96 Aligned_cols=47 Identities=21% Similarity=0.490 Sum_probs=36.9
Q ss_pred CceEEEecccccccCCchhhhCCCCeeeec---CCCCcccceEEEEecCH
Q 006648 392 YDKIIFIDADLLILRNIDFLFGMPEISATG---NNGTMFNSGVMVIEPSS 438 (637)
Q Consensus 392 YDRVLYLDAD~LVL~nLDeLFdlp~IaAv~---D~~~yFNSGVMVInPs~ 438 (637)
-+-+||||+|||+.+.|.-|+.-+.||.-. +....+-.|.++++.+.
T Consensus 211 ~~GCIYLD~DMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsn 260 (326)
T PRK15382 211 CEGCIYLDADMIITDKLGVLYAPDGIAVHVDCNDDSKSLENGAIVVNRSN 260 (326)
T ss_pred CCceEEeecceeeecccccEEcCCceEEEEEecCCccccccceEEEccCC
Confidence 467999999999999999998877777532 35556667888888764
No 43
>PRK15383 type III secretion system protein; Provisional
Probab=59.11 E-value=7.4 Score=40.89 Aligned_cols=47 Identities=21% Similarity=0.380 Sum_probs=36.7
Q ss_pred CceEEEecccccccCCchhhhCCCCeeeec---CCCCcccceEEEEecCH
Q 006648 392 YDKIIFIDADLLILRNIDFLFGMPEISATG---NNGTMFNSGVMVIEPSS 438 (637)
Q Consensus 392 YDRVLYLDAD~LVL~nLDeLFdlp~IaAv~---D~~~yFNSGVMVInPs~ 438 (637)
-+-+||||+|||+.+.|.-|+.-+.||.-. +....+-.|.+++|.+.
T Consensus 219 ~~GCIYLD~DMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsn 268 (335)
T PRK15383 219 GGGCIYLDADMLLTDKLGTLYLPDGIAIHVSRKDNHVSLENGIIAVNRSE 268 (335)
T ss_pred CCceEEeecceeeecccccEEcCCceEEEEEecCCceecccceEEEccCC
Confidence 467999999999999999998877777542 34555667888888764
No 44
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=58.68 E-value=72 Score=34.86 Aligned_cols=102 Identities=14% Similarity=0.040 Sum_probs=48.6
Q ss_pred CCCEEEEEEeecCcchHHHHHHHHHHHHHhC-C-CCcEEEEEcCCCCHHHHHHHHHcCC------EEEEEeeccCCcccc
Q 006648 302 VHREAYATILHSAHVYVCGAIAAAQSIRMSG-S-TRDLVILVDETISAYHRSGLEAAGW------KVRTIQRIRNPKAEK 373 (637)
Q Consensus 302 ~~R~AYVTlLtsdd~YL~gAiVL~~SLr~~n-s-~~dlVILvtd~ISee~r~~Lk~~g~------~V~~I~~I~~P~~~~ 373 (637)
.++...+....+.+ ....-++.||.... + ++. +|+++|+-++.+.+.+++... .++.+..-..|..
T Consensus 39 ~p~VSVIIpa~Ne~---~~L~~~L~sL~~q~yp~~~e-IIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~~~g-- 112 (384)
T TIGR03469 39 WPAVVAVVPARNEA---DVIGECVTSLLEQDYPGKLH-VILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPLPPG-- 112 (384)
T ss_pred CCCEEEEEecCCcH---hHHHHHHHHHHhCCCCCceE-EEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCCCCC--
Confidence 34555554444333 44556777887542 3 233 455666666666555554321 2333321111111
Q ss_pred ccccchhHHHHHHccc-----CCCceEEEecccccccCC-chhh
Q 006648 374 DAYNEWNYSKFRLWQL-----TDYDKIIFIDADLLILRN-IDFL 411 (637)
Q Consensus 374 ~~~~~~tysKL~Iw~L-----tdYDRVLYLDAD~LVL~n-LDeL 411 (637)
+....+.--...+. .+.|-|+++|+|+++-.+ +..+
T Consensus 113 --~~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~~l~~l 154 (384)
T TIGR03469 113 --WSGKLWAVSQGIAAARTLAPPADYLLLTDADIAHGPDNLARL 154 (384)
T ss_pred --CcchHHHHHHHHHHHhccCCCCCEEEEECCCCCCChhHHHHH
Confidence 11111111111122 238999999999998544 3444
No 45
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=56.70 E-value=53 Score=32.70 Aligned_cols=83 Identities=10% Similarity=-0.036 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHhC-CCCcE-EEEEcCCCCHHHHHHHHHcCC-EEEEEeeccCCccccccccchhHHHHHHcccCCCceEE
Q 006648 320 GAIAAAQSIRMSG-STRDL-VILVDETISAYHRSGLEAAGW-KVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKII 396 (637)
Q Consensus 320 gAiVL~~SLr~~n-s~~dl-VILvtd~ISee~r~~Lk~~g~-~V~~I~~I~~P~~~~~~~~~~tysKL~Iw~LtdYDRVL 396 (637)
...-++.||.... +...+ +|+++++-++++.+.+++... ....|..+.+... .. .....=...+...+|=|+
T Consensus 15 ~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~~~~~~i~~~~~~~~-~G----~~~a~n~g~~~a~gd~i~ 89 (241)
T cd06427 15 VLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALRLPSIFRVVVVPPSQP-RT----KPKACNYALAFARGEYVV 89 (241)
T ss_pred HHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhccCCCeeEEEecCCCC-Cc----hHHHHHHHHHhcCCCEEE
Confidence 3456667776532 22223 334555556777777777542 1111211211110 00 011111233446779999
Q ss_pred EecccccccCC
Q 006648 397 FIDADLLILRN 407 (637)
Q Consensus 397 YLDAD~LVL~n 407 (637)
++|+|+++-.+
T Consensus 90 ~~DaD~~~~~~ 100 (241)
T cd06427 90 IYDAEDAPDPD 100 (241)
T ss_pred EEcCCCCCChH
Confidence 99999998765
No 46
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=56.55 E-value=32 Score=32.82 Aligned_cols=82 Identities=16% Similarity=0.138 Sum_probs=42.8
Q ss_pred HHHHHHHHHHh-CCCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEeeccCCccccccccchhH-HHHHHcccCCCceEEEe
Q 006648 321 AIAAAQSIRMS-GSTRDLVILVDETISAYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNY-SKFRLWQLTDYDKIIFI 398 (637)
Q Consensus 321 AiVL~~SLr~~-ns~~dlVILvtd~ISee~r~~Lk~~g~~V~~I~~I~~P~~~~~~~~~~ty-sKL~Iw~LtdYDRVLYL 398 (637)
..-++.||... .+... +|+++++-++.+.+.+++.+.... +..+..+...... ...+. .+... ..++|-++++
T Consensus 12 l~~~l~sl~~q~~~~~e-iiivD~~s~d~t~~~~~~~~~~~~-i~~~~~~~n~g~~-~~~n~~~~~a~--~~~~d~v~~l 86 (202)
T cd04185 12 LKECLDALLAQTRPPDH-IIVIDNASTDGTAEWLTSLGDLDN-IVYLRLPENLGGA-GGFYEGVRRAY--ELGYDWIWLM 86 (202)
T ss_pred HHHHHHHHHhccCCCce-EEEEECCCCcchHHHHHHhcCCCc-eEEEECccccchh-hHHHHHHHHHh--ccCCCEEEEe
Confidence 34556677653 34444 455666666677777777654321 2222222211100 00110 11111 3578999999
Q ss_pred cccccccCC
Q 006648 399 DADLLILRN 407 (637)
Q Consensus 399 DAD~LVL~n 407 (637)
|+|.++..+
T Consensus 87 d~D~~~~~~ 95 (202)
T cd04185 87 DDDAIPDPD 95 (202)
T ss_pred CCCCCcChH
Confidence 999999765
No 47
>PRK10063 putative glycosyl transferase; Provisional
Probab=55.39 E-value=68 Score=32.91 Aligned_cols=92 Identities=13% Similarity=0.082 Sum_probs=47.7
Q ss_pred EEEEEEeecCcchHHHHHHHHHHHHHh--CCCCcE-EEEEcCCCCHHHHHHHHHcCC--EEEEEeeccCCccccccccch
Q 006648 305 EAYATILHSAHVYVCGAIAAAQSIRMS--GSTRDL-VILVDETISAYHRSGLEAAGW--KVRTIQRIRNPKAEKDAYNEW 379 (637)
Q Consensus 305 ~AYVTlLtsdd~YL~gAiVL~~SLr~~--ns~~dl-VILvtd~ISee~r~~Lk~~g~--~V~~I~~I~~P~~~~~~~~~~ 379 (637)
...|+.......++. -++.||... .+..++ +|+++++-++.+.+.+++... .++.+ ..+... .
T Consensus 3 vSVIi~~yN~~~~l~---~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i~~~~~~~~~i~~i---~~~~~G------~ 70 (248)
T PRK10063 3 LSVITVAFRNLEGIV---KTHASLRHLAQDPGISFEWIVVDGGSNDGTREFLENLNGIFNLRFV---SEPDNG------I 70 (248)
T ss_pred EEEEEEeCCCHHHHH---HHHHHHHHHHhCCCCCEEEEEEECcCcccHHHHHHHhcccCCEEEE---ECCCCC------H
Confidence 344554554445554 445555432 122244 455677777777778877642 22222 222111 0
Q ss_pred hHHHHHHcccCCCceEEEecccccccCCc
Q 006648 380 NYSKFRLWQLTDYDKIIFIDADLLILRNI 408 (637)
Q Consensus 380 tysKL~Iw~LtdYDRVLYLDAD~LVL~nL 408 (637)
.-.+=........|-|++||+|-++..+.
T Consensus 71 ~~A~N~Gi~~a~g~~v~~ld~DD~~~~~~ 99 (248)
T PRK10063 71 YDAMNKGIAMAQGRFALFLNSGDIFHQDA 99 (248)
T ss_pred HHHHHHHHHHcCCCEEEEEeCCcccCcCH
Confidence 01111222334678999999998887763
No 48
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=55.00 E-value=59 Score=39.97 Aligned_cols=82 Identities=12% Similarity=0.126 Sum_probs=46.4
Q ss_pred hCCCCcE-EEEEcCCCCHHHHHHHHHcCCEEEEEeeccCCccccccccchhHHHHHHcccCCCceEEEecccccccCCc-
Q 006648 331 SGSTRDL-VILVDETISAYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNI- 408 (637)
Q Consensus 331 ~ns~~dl-VILvtd~ISee~r~~Lk~~g~~V~~I~~I~~P~~~~~~~~~~tysKL~Iw~LtdYDRVLYLDAD~LVL~nL- 408 (637)
..+..++ ++++||+-+++..+..++.+++++.- -.+...+..+.+ ...+..+.|=|+++|||.++..|.
T Consensus 287 dYP~~k~EViVVDDgS~D~t~~la~~~~v~yI~R--~~n~~gKAGnLN-------~aL~~a~GEyIavlDAD~ip~pdfL 357 (852)
T PRK11498 287 DWPKDKLNIWILDDGGREEFRQFAQEVGVKYIAR--PTHEHAKAGNIN-------NALKYAKGEFVAIFDCDHVPTRSFL 357 (852)
T ss_pred cCCCCceEEEEEeCCCChHHHHHHHHCCcEEEEe--CCCCcchHHHHH-------HHHHhCCCCEEEEECCCCCCChHHH
Confidence 3443334 45567777778877888887665431 111111111111 111235789999999999997763
Q ss_pred hh----hhCCCCeeeec
Q 006648 409 DF----LFGMPEISATG 421 (637)
Q Consensus 409 De----LFdlp~IaAv~ 421 (637)
.. +++-|.++++.
T Consensus 358 ~~~V~~f~~dP~VglVQ 374 (852)
T PRK11498 358 QMTMGWFLKDKKLAMMQ 374 (852)
T ss_pred HHHHHHHHhCCCeEEEE
Confidence 32 23445677664
No 49
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=54.10 E-value=82 Score=29.83 Aligned_cols=79 Identities=16% Similarity=0.102 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhC-CCCcEEEEEcCCC-CHHHHHHHHHcCC--EEEEEeeccCCccccccccchhHHHHHHcccCCCceE
Q 006648 320 GAIAAAQSIRMSG-STRDLVILVDETI-SAYHRSGLEAAGW--KVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKI 395 (637)
Q Consensus 320 gAiVL~~SLr~~n-s~~dlVILvtd~I-See~r~~Lk~~g~--~V~~I~~I~~P~~~~~~~~~~tysKL~Iw~LtdYDRV 395 (637)
.+.-++.||.... +...+ |+++|+- ++...+.+++... .+.. +..+... .....+-......+.|=|
T Consensus 14 ~l~~~l~Sl~~q~~~~~ei-iivdd~ss~d~t~~~~~~~~~~~~i~~---i~~~~n~-----G~~~a~N~g~~~a~gd~i 84 (201)
T cd04195 14 FLREALESILKQTLPPDEV-VLVKDGPVTQSLNEVLEEFKRKLPLKV---VPLEKNR-----GLGKALNEGLKHCTYDWV 84 (201)
T ss_pred HHHHHHHHHHhcCCCCcEE-EEEECCCCchhHHHHHHHHHhcCCeEE---EEcCccc-----cHHHHHHHHHHhcCCCEE
Confidence 4456677776643 33444 4455554 4445555554321 1222 2222111 112233344455678899
Q ss_pred EEecccccccCC
Q 006648 396 IFIDADLLILRN 407 (637)
Q Consensus 396 LYLDAD~LVL~n 407 (637)
+++|+|.++..+
T Consensus 85 ~~lD~Dd~~~~~ 96 (201)
T cd04195 85 ARMDTDDISLPD 96 (201)
T ss_pred EEeCCccccCcH
Confidence 999999988654
No 50
>PRK11204 N-glycosyltransferase; Provisional
Probab=52.69 E-value=54 Score=35.79 Aligned_cols=108 Identities=12% Similarity=0.085 Sum_probs=54.2
Q ss_pred CCCEEEEEEeecCcchHHHHHHHHHHHHHh-CCCCcEEEEEcCCCCHHHHHHHHHc---CCEEEEEeeccCCcccccccc
Q 006648 302 VHREAYATILHSAHVYVCGAIAAAQSIRMS-GSTRDLVILVDETISAYHRSGLEAA---GWKVRTIQRIRNPKAEKDAYN 377 (637)
Q Consensus 302 ~~R~AYVTlLtsdd~YL~gAiVL~~SLr~~-ns~~dlVILvtd~ISee~r~~Lk~~---g~~V~~I~~I~~P~~~~~~~~ 377 (637)
.++.+.+...+..+.. ..-++.|+.+. .++++++| ++|+-++++.+.+++. ..++..+..-.+. ....+
T Consensus 53 ~p~vsViIp~yne~~~---i~~~l~sl~~q~yp~~eiiV-vdD~s~d~t~~~l~~~~~~~~~v~~i~~~~n~-Gka~a-- 125 (420)
T PRK11204 53 YPGVSILVPCYNEGEN---VEETISHLLALRYPNYEVIA-INDGSSDNTGEILDRLAAQIPRLRVIHLAENQ-GKANA-- 125 (420)
T ss_pred CCCEEEEEecCCCHHH---HHHHHHHHHhCCCCCeEEEE-EECCCCccHHHHHHHHHHhCCcEEEEEcCCCC-CHHHH--
Confidence 3456655555544333 44556676653 35555544 5666555555555443 2333333211111 11111
Q ss_pred chhHHHHHHcccCCCceEEEecccccccCC-chhh---h-CCCCeeeec
Q 006648 378 EWNYSKFRLWQLTDYDKIIFIDADLLILRN-IDFL---F-GMPEISATG 421 (637)
Q Consensus 378 ~~tysKL~Iw~LtdYDRVLYLDAD~LVL~n-LDeL---F-dlp~IaAv~ 421 (637)
.=...+..++|-|+++|+|.++-.+ +.++ | +-|.++++.
T Consensus 126 -----ln~g~~~a~~d~i~~lDaD~~~~~d~L~~l~~~~~~~~~v~~v~ 169 (420)
T PRK11204 126 -----LNTGAAAARSEYLVCIDGDALLDPDAAAYMVEHFLHNPRVGAVT 169 (420)
T ss_pred -----HHHHHHHcCCCEEEEECCCCCCChhHHHHHHHHHHhCCCeEEEE
Confidence 1112233578999999999998765 3333 3 234455553
No 51
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=52.09 E-value=28 Score=33.59 Aligned_cols=81 Identities=9% Similarity=0.039 Sum_probs=39.5
Q ss_pred HHHHHHHHHHh-CCCCcEEEEEcCCCCHHHHHHHHHcC-----CEEEEEeeccCCccccccccchhHHHHHHcccCCCce
Q 006648 321 AIAAAQSIRMS-GSTRDLVILVDETISAYHRSGLEAAG-----WKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDK 394 (637)
Q Consensus 321 AiVL~~SLr~~-ns~~dlVILvtd~ISee~r~~Lk~~g-----~~V~~I~~I~~P~~~~~~~~~~tysKL~Iw~LtdYDR 394 (637)
..-++.||... .+.++++| ++++-++++.+.+++.. .+++.+.. ..... ........-...+...+|=
T Consensus 16 l~~~L~sl~~q~~~~~eiiv-Vdd~s~d~t~~~~~~~~~~~~~~~~~~~~~-~~~~g----~~~~~~~~n~g~~~a~~d~ 89 (196)
T cd02520 16 LYENLESFFQQDYPKYEILF-CVQDEDDPAIPVVRKLIAKYPNVDARLLIG-GEKVG----INPKVNNLIKGYEEARYDI 89 (196)
T ss_pred HHHHHHHHHhccCCCeEEEE-EeCCCcchHHHHHHHHHHHCCCCcEEEEec-CCcCC----CCHhHHHHHHHHHhCCCCE
Confidence 45667777753 34555554 45555555555554431 22222211 11100 0000111112344467899
Q ss_pred EEEecccccccCC
Q 006648 395 IIFIDADLLILRN 407 (637)
Q Consensus 395 VLYLDAD~LVL~n 407 (637)
++++|+|+++-.+
T Consensus 90 i~~~D~D~~~~~~ 102 (196)
T cd02520 90 LVISDSDISVPPD 102 (196)
T ss_pred EEEECCCceEChh
Confidence 9999999987443
No 52
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=50.82 E-value=59 Score=31.21 Aligned_cols=20 Identities=30% Similarity=0.325 Sum_probs=16.2
Q ss_pred ccCCCceEEEecccccccCC
Q 006648 388 QLTDYDKIIFIDADLLILRN 407 (637)
Q Consensus 388 ~LtdYDRVLYLDAD~LVL~n 407 (637)
....+|-|+++|+|.++..+
T Consensus 79 ~~~~~d~i~~~D~D~~~~~~ 98 (229)
T cd04192 79 KAAKGDWIVTTDADCVVPSN 98 (229)
T ss_pred HHhcCCEEEEECCCcccCHH
Confidence 34578999999999988654
No 53
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=50.73 E-value=94 Score=29.46 Aligned_cols=83 Identities=18% Similarity=0.199 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHhC-C--CCcEEEEEcCCCCHHHHHHHHHcCCEEEEEeeccCCccccc-cccchhHHHHHHcccCCCceE
Q 006648 320 GAIAAAQSIRMSG-S--TRDLVILVDETISAYHRSGLEAAGWKVRTIQRIRNPKAEKD-AYNEWNYSKFRLWQLTDYDKI 395 (637)
Q Consensus 320 gAiVL~~SLr~~n-s--~~dlVILvtd~ISee~r~~Lk~~g~~V~~I~~I~~P~~~~~-~~~~~tysKL~Iw~LtdYDRV 395 (637)
.+..++.||.+.. + .+. +++++++-++++.+.+++.+..++... ......+. +.+ ..+..... .-..+|-|
T Consensus 11 ~i~~~l~sl~~~~~p~~~~e-iivvdd~s~D~t~~~~~~~~~~~~~~~--~~~~~gk~~aln-~g~~~a~~-~~~~~d~v 85 (183)
T cd06438 11 VIGNTVRSLKAQDYPRELYR-IFVVADNCTDDTAQVARAAGATVLERH--DPERRGKGYALD-FGFRHLLN-LADDPDAV 85 (183)
T ss_pred HHHHHHHHHHhcCCCCcccE-EEEEeCCCCchHHHHHHHcCCeEEEeC--CCCCCCHHHHHH-HHHHHHHh-cCCCCCEE
Confidence 3445567776543 2 233 444566666777788888777643321 11111110 000 00111100 11368999
Q ss_pred EEecccccccCC
Q 006648 396 IFIDADLLILRN 407 (637)
Q Consensus 396 LYLDAD~LVL~n 407 (637)
+++|+|+++-.+
T Consensus 86 ~~~DaD~~~~p~ 97 (183)
T cd06438 86 VVFDADNLVDPN 97 (183)
T ss_pred EEEcCCCCCChh
Confidence 999999999644
No 54
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=50.72 E-value=44 Score=34.63 Aligned_cols=79 Identities=20% Similarity=0.378 Sum_probs=51.3
Q ss_pred cCCCceEEEecccccccCC---chhhhCCC-CeeeecC-CCCcccceEEEEecCHHHHHHHHHHHH---h-cCCCCCCCh
Q 006648 389 LTDYDKIIFIDADLLILRN---IDFLFGMP-EISATGN-NGTMFNSGVMVIEPSSCTFQLLMDHIN---E-FESYNGGDQ 459 (637)
Q Consensus 389 LtdYDRVLYLDAD~LVL~n---LDeLFdlp-~IaAv~D-~~~yFNSGVMVInPs~~~fe~L~e~l~---~-~~sy~~~DQ 459 (637)
|.+||-|++||+||.|..+ |.+..+-. ++.-... ...-+.+|--+++.+...-+-|.+.+. + ..++.+.|-
T Consensus 39 L~~~~~vlflDaDigVvNp~~~iEefid~~~Di~fydR~~n~Ei~agsYlvkNT~~~~~fl~~~a~~E~~lP~sfhGtDN 118 (222)
T PF03314_consen 39 LPEYDWVLFLDADIGVVNPNRRIEEFIDEGYDIIFYDRFFNWEIAAGSYLVKNTEYSRDFLKEWADYEFKLPNSFHGTDN 118 (222)
T ss_pred hccCCEEEEEcCCceeecCcccHHHhcCCCCcEEEEecccchhhhhccceeeCCHHHHHHHHHHhhhCccCCCccccCcc
Confidence 4789999999999999976 33333211 1111100 123356777888888877777766653 1 347788999
Q ss_pred hHHHHhcc
Q 006648 460 GYLNEVFT 467 (637)
Q Consensus 460 diLN~vF~ 467 (637)
|.|-.+..
T Consensus 119 GAlH~~L~ 126 (222)
T PF03314_consen 119 GALHIFLA 126 (222)
T ss_pred HHHHHHHH
Confidence 98887765
No 55
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=50.46 E-value=1e+02 Score=27.05 Aligned_cols=85 Identities=18% Similarity=0.051 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHHHHhC-CCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEeeccCCccccccccchhHHHHHHcccCCCceE
Q 006648 317 YVCGAIAAAQSIRMSG-STRDLVILVDETISAYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKI 395 (637)
Q Consensus 317 YL~gAiVL~~SLr~~n-s~~dlVILvtd~ISee~r~~Lk~~g~~V~~I~~I~~P~~~~~~~~~~tysKL~Iw~LtdYDRV 395 (637)
.-..+..++.|+.... .... +|+++++-++.+.+.++........+.....+.. ....+.+-.......-+-|
T Consensus 14 ~~~~l~~~l~s~~~q~~~~~e-iivvddgs~d~t~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~ 87 (291)
T COG0463 14 EEEYLPEALESLLNQTYKDFE-IIVVDDGSTDGTTEIAIEYGAKDVRVIRLINERN-----GGLGAARNAGLEYARGDYI 87 (291)
T ss_pred hhhhHHHHHHHHHhhhhcceE-EEEEeCCCCCChHHHHHHHhhhcceEEEeecccC-----CChHHHHHhhHHhccCCEE
Confidence 3355666777777643 3335 7778877777776777666543211100000000 0112333333333333999
Q ss_pred EEecccccccCCc
Q 006648 396 IFIDADLLILRNI 408 (637)
Q Consensus 396 LYLDAD~LVL~nL 408 (637)
+++|+|.+ ..+-
T Consensus 88 ~~~d~d~~-~~~~ 99 (291)
T COG0463 88 VFLDADDQ-HPPE 99 (291)
T ss_pred EEEccCCC-CCHH
Confidence 99999999 6653
No 56
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=49.95 E-value=1.4e+02 Score=28.78 Aligned_cols=81 Identities=12% Similarity=0.049 Sum_probs=43.0
Q ss_pred HHHHHHHHHHhC-CC--CcEEEEEcCCCCHHHHHHHHHcCCEEEEEeeccCCccccccccchhHHHHHHcccCCCceEEE
Q 006648 321 AIAAAQSIRMSG-ST--RDLVILVDETISAYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIF 397 (637)
Q Consensus 321 AiVL~~SLr~~n-s~--~dlVILvtd~ISee~r~~Lk~~g~~V~~I~~I~~P~~~~~~~~~~tysKL~Iw~LtdYDRVLY 397 (637)
...++.||.... +. +. +|+++++-+++..+.+++.+.+. .+..+..+.... .. ....-...+...+|-|++
T Consensus 17 l~~~l~sl~~q~~~~~~~e-iivvdd~s~d~t~~~~~~~~~~~-~~~~~~~~~~~~--~~--~~~~n~~~~~a~~d~i~~ 90 (234)
T cd06421 17 VRKTLRAALAIDYPHDKLR-VYVLDDGRRPELRALAAELGVEY-GYRYLTRPDNRH--AK--AGNLNNALAHTTGDFVAI 90 (234)
T ss_pred HHHHHHHHHhcCCCcccEE-EEEEcCCCchhHHHHHHHhhccc-CceEEEeCCCCC--Cc--HHHHHHHHHhCCCCEEEE
Confidence 455677777532 33 33 44467776777777777765421 111111111100 00 011123334458999999
Q ss_pred ecccccccCC
Q 006648 398 IDADLLILRN 407 (637)
Q Consensus 398 LDAD~LVL~n 407 (637)
+|+|.++-.+
T Consensus 91 lD~D~~~~~~ 100 (234)
T cd06421 91 LDADHVPTPD 100 (234)
T ss_pred EccccCcCcc
Confidence 9999999654
No 57
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=49.21 E-value=78 Score=31.52 Aligned_cols=73 Identities=18% Similarity=0.116 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhCCCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEeeccCCccccccccchhHHHHHHcccCCCceEEEecc
Q 006648 321 AIAAAQSIRMSGSTRDLVILVDETISAYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDA 400 (637)
Q Consensus 321 AiVL~~SLr~~ns~~dlVILvtd~ISee~r~~Lk~~g~~V~~I~~I~~P~~~~~~~~~~tysKL~Iw~LtdYDRVLYLDA 400 (637)
..-++.||... .+-+|+++++-++.+.+.+++.+.+++.. .+.. ....+=...+....|-|++||+
T Consensus 15 l~~~l~sl~~~---~~eiivvD~gStD~t~~i~~~~~~~v~~~---~~~g--------~~~~~n~~~~~a~~d~vl~lDa 80 (229)
T cd02511 15 IERCLESVKWA---VDEIIVVDSGSTDRTVEIAKEYGAKVYQR---WWDG--------FGAQRNFALELATNDWVLSLDA 80 (229)
T ss_pred HHHHHHHHhcc---cCEEEEEeCCCCccHHHHHHHcCCEEEEC---CCCC--------hHHHHHHHHHhCCCCEEEEEeC
Confidence 34455666532 13456677776777788888888776543 1110 1112333444456789999999
Q ss_pred cccccCC
Q 006648 401 DLLILRN 407 (637)
Q Consensus 401 D~LVL~n 407 (637)
|.++..+
T Consensus 81 D~~~~~~ 87 (229)
T cd02511 81 DERLTPE 87 (229)
T ss_pred CcCcCHH
Confidence 9988655
No 58
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=48.46 E-value=89 Score=29.62 Aligned_cols=88 Identities=22% Similarity=0.097 Sum_probs=43.8
Q ss_pred HHHHHHHHHHh-CCCCcEEEEEcCCCCHHHHHHHHHcCCEE-EEEeeccCCccccccccchhHHHHHHcccCCCceEEEe
Q 006648 321 AIAAAQSIRMS-GSTRDLVILVDETISAYHRSGLEAAGWKV-RTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFI 398 (637)
Q Consensus 321 AiVL~~SLr~~-ns~~dlVILvtd~ISee~r~~Lk~~g~~V-~~I~~I~~P~~~~~~~~~~tysKL~Iw~LtdYDRVLYL 398 (637)
+.-++.||... .++.. +|+++++-++++.+.+++...+- ..+..+..+.... ..-..-........|-|++|
T Consensus 13 l~~~l~sl~~q~~~~~e-iiVvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~~~G-----~~~~~n~g~~~~~g~~v~~l 86 (214)
T cd04196 13 LREQLDSILAQTYKNDE-LIISDDGSTDGTVEIIKEYIDKDPFIIILIRNGKNLG-----VARNFESLLQAADGDYVFFC 86 (214)
T ss_pred HHHHHHHHHhCcCCCeE-EEEEeCCCCCCcHHHHHHHHhcCCceEEEEeCCCCcc-----HHHHHHHHHHhCCCCEEEEE
Confidence 34566777653 33333 44455555555666665543221 1111111111100 01111112344678999999
Q ss_pred cccccccCC-chhhhCC
Q 006648 399 DADLLILRN-IDFLFGM 414 (637)
Q Consensus 399 DAD~LVL~n-LDeLFdl 414 (637)
|+|.++..+ +..+.+.
T Consensus 87 d~Dd~~~~~~l~~~~~~ 103 (214)
T cd04196 87 DQDDIWLPDKLERLLKA 103 (214)
T ss_pred CCCcccChhHHHHHHHH
Confidence 999888766 5666553
No 59
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=46.87 E-value=1.1e+02 Score=29.67 Aligned_cols=92 Identities=15% Similarity=0.110 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEcCCCCHHHHHHHHHc--CCEEEEEeeccCCccccccccchhHHHHHHcccCCCceEE
Q 006648 319 CGAIAAAQSIRMSGSTRDLVILVDETISAYHRSGLEAA--GWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKII 396 (637)
Q Consensus 319 ~gAiVL~~SLr~~ns~~dlVILvtd~ISee~r~~Lk~~--g~~V~~I~~I~~P~~~~~~~~~~tysKL~Iw~LtdYDRVL 396 (637)
.....++.||.... ..+++| ++++-+++....|+.. ...++.+. .+...+ ....-...+...+|-|+
T Consensus 14 ~~l~~~l~sl~~q~-~~eiiv-vdd~s~d~~~~~l~~~~~~~~~~v~~---~~~~g~------~~a~n~g~~~a~~d~v~ 82 (235)
T cd06434 14 DVFRECLRSILRQK-PLEIIV-VTDGDDEPYLSILSQTVKYGGIFVIT---VPHPGK------RRALAEGIRHVTTDIVV 82 (235)
T ss_pred HHHHHHHHHHHhCC-CCEEEE-EeCCCChHHHHHHHhhccCCcEEEEe---cCCCCh------HHHHHHHHHHhCCCEEE
Confidence 44555677777654 455544 5566666666655322 12222111 111110 11111233345899999
Q ss_pred EecccccccCC-chhhh---CCCCeeeec
Q 006648 397 FIDADLLILRN-IDFLF---GMPEISATG 421 (637)
Q Consensus 397 YLDAD~LVL~n-LDeLF---dlp~IaAv~ 421 (637)
+||+|+++-.+ |..+. .-+.++++.
T Consensus 83 ~lD~D~~~~~~~l~~l~~~~~~~~v~~v~ 111 (235)
T cd06434 83 LLDSDTVWPPNALPEMLKPFEDPKVGGVG 111 (235)
T ss_pred EECCCceeChhHHHHHHHhccCCCEeEEc
Confidence 99999999887 44443 223455553
No 60
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=46.30 E-value=1.1e+02 Score=29.48 Aligned_cols=75 Identities=19% Similarity=0.114 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHhC-CCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEeeccCCccccccccchhHHHHHHcccCCCceEEEe
Q 006648 320 GAIAAAQSIRMSG-STRDLVILVDETISAYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFI 398 (637)
Q Consensus 320 gAiVL~~SLr~~n-s~~dlVILvtd~ISee~r~~Lk~~g~~V~~I~~I~~P~~~~~~~~~~tysKL~Iw~LtdYDRVLYL 398 (637)
.+.-++.||.... +...+ |+++++-+++..+.+++.+..++. .+... ...+-........+-|+++
T Consensus 13 ~l~~~l~sl~~q~~~~~ev-ivvdd~s~d~~~~~~~~~~~~~~~-----~~~g~-------~~a~n~g~~~a~~~~i~~~ 79 (221)
T cd02522 13 NLPRLLASLRRLNPLPLEI-IVVDGGSTDGTVAIARSAGVVVIS-----SPKGR-------ARQMNAGAAAARGDWLLFL 79 (221)
T ss_pred HHHHHHHHHHhccCCCcEE-EEEeCCCCccHHHHHhcCCeEEEe-----CCcCH-------HHHHHHHHHhccCCEEEEE
Confidence 4456677777643 33444 445666666666667664333221 11111 1122223344457899999
Q ss_pred cccccccCC
Q 006648 399 DADLLILRN 407 (637)
Q Consensus 399 DAD~LVL~n 407 (637)
|+|..+..+
T Consensus 80 D~D~~~~~~ 88 (221)
T cd02522 80 HADTRLPPD 88 (221)
T ss_pred cCCCCCChh
Confidence 999988654
No 61
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=46.07 E-value=87 Score=32.48 Aligned_cols=86 Identities=17% Similarity=0.106 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHhCCCC-c-EEEEEcCCCCHHHHHHHHH-----cCCEEEEEeeccCCccccccccchhHHHHHHcccCC
Q 006648 319 CGAIAAAQSIRMSGSTR-D-LVILVDETISAYHRSGLEA-----AGWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTD 391 (637)
Q Consensus 319 ~gAiVL~~SLr~~ns~~-d-lVILvtd~ISee~r~~Lk~-----~g~~V~~I~~I~~P~~~~~~~~~~tysKL~Iw~Ltd 391 (637)
....-++.||....+.. . -+|+++++-++.+...+.+ ....++.| ..+.... ..-.+=.......
T Consensus 12 ~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~vi---~~~~n~G-----~~~a~N~g~~~A~ 83 (299)
T cd02510 12 STLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKVKVL---RLKKREG-----LIRARIAGARAAT 83 (299)
T ss_pred HHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCcEEEE---EcCCCCC-----HHHHHHHHHHHcc
Confidence 56667788888654332 2 3666777666655554432 22223222 2221100 0111222223356
Q ss_pred CceEEEecccccccCC-chhhh
Q 006648 392 YDKIIFIDADLLILRN-IDFLF 412 (637)
Q Consensus 392 YDRVLYLDAD~LVL~n-LDeLF 412 (637)
.|-|++||+|+++..+ |..|.
T Consensus 84 gd~i~fLD~D~~~~~~wL~~ll 105 (299)
T cd02510 84 GDVLVFLDSHCEVNVGWLEPLL 105 (299)
T ss_pred CCEEEEEeCCcccCccHHHHHH
Confidence 7999999999999655 55554
No 62
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=46.03 E-value=11 Score=33.59 Aligned_cols=88 Identities=13% Similarity=0.139 Sum_probs=44.6
Q ss_pred HHHHHHHHHhCCCCcEEEEEcCCC----CHHHHHHHHHcCCEEEEEeeccCCccccccccchhHHHHHH-cccCCCceEE
Q 006648 322 IAAAQSIRMSGSTRDLVILVDETI----SAYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNYSKFRL-WQLTDYDKII 396 (637)
Q Consensus 322 iVL~~SLr~~ns~~dlVILvtd~I----See~r~~Lk~~g~~V~~I~~I~~P~~~~~~~~~~tysKL~I-w~LtdYDRVL 396 (637)
.-.++|.++++|++.++++.+... .....+.|.+....+.....-..+..........-+.|+.+ +.... |
T Consensus 5 ~~~i~s~~~~nP~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~sD~~R~~~L~~~GG----i 80 (103)
T PF04488_consen 5 QCSIESWARHNPDYEYILWTDESDNVRVKRIDIEFLFEKTPWFLELYNKWEPGRYPNYAHKSDLLRYLVLYKYGG----I 80 (103)
T ss_pred HHHHHHHHHHCCCCEEEEEECCCcchhhhHHHHHHHHhCChHHHHHHhhhhcccccchHHHHHHHHHHHHHHcCc----E
Confidence 346788999999999988766543 12222333322110000000000000000001123555444 33333 8
Q ss_pred EecccccccCCc-hhhhC
Q 006648 397 FIDADLLILRNI-DFLFG 413 (637)
Q Consensus 397 YLDAD~LVL~nL-DeLFd 413 (637)
|+|.|+++++++ +.+..
T Consensus 81 Y~D~D~~~~rpl~~~~~~ 98 (103)
T PF04488_consen 81 YLDLDVICLRPLDDPWLP 98 (103)
T ss_pred EEeCccccCcchhhhhhc
Confidence 999999999999 87764
No 63
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=45.38 E-value=80 Score=32.90 Aligned_cols=88 Identities=19% Similarity=0.200 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHhCCCCcEE-EEEcCCCCHHHHHHHHH----cCCE-EEEEeeccCCccccccccchhHHHHHHcccCCC
Q 006648 319 CGAIAAAQSIRMSGSTRDLV-ILVDETISAYHRSGLEA----AGWK-VRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDY 392 (637)
Q Consensus 319 ~gAiVL~~SLr~~ns~~dlV-ILvtd~ISee~r~~Lk~----~g~~-V~~I~~I~~P~~~~~~~~~~tysKL~Iw~LtdY 392 (637)
..+..++.|+....+..++. |+++++-+++....|++ .+.. .+..+ .. ...++. +-.|=...+...-
T Consensus 17 ~~l~~~l~~l~~~~~~~~~eiIvvd~~s~~~~~~~l~~~~~~~~~~~~i~~~-----~~-~~~f~~-a~arN~g~~~A~~ 89 (281)
T PF10111_consen 17 ERLRNCLESLSQFQSDPDFEIIVVDDGSSDEFDEELKKLCEKNGFIRYIRHE-----DN-GEPFSR-AKARNIGAKYARG 89 (281)
T ss_pred HHHHHHHHHHHhcCCCCCEEEEEEECCCchhHHHHHHHHHhccCceEEEEcC-----CC-CCCcCH-HHHHHHHHHHcCC
Confidence 44556678888766666663 44555555444333333 3333 22111 00 001111 1122233444578
Q ss_pred ceEEEecccccccCC-chhhhC
Q 006648 393 DKIIFIDADLLILRN-IDFLFG 413 (637)
Q Consensus 393 DRVLYLDAD~LVL~n-LDeLFd 413 (637)
|-|+++|+|+++-.+ +..+..
T Consensus 90 d~l~flD~D~i~~~~~i~~~~~ 111 (281)
T PF10111_consen 90 DYLIFLDADCIPSPDFIEKLLN 111 (281)
T ss_pred CEEEEEcCCeeeCHHHHHHHHH
Confidence 999999999999765 444444
No 64
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=45.08 E-value=1.3e+02 Score=32.99 Aligned_cols=95 Identities=14% Similarity=0.058 Sum_probs=49.2
Q ss_pred hHHHHHHHHHHHHHhCC---CCcEEEEEcCCCCHHHHHHHHHcCCEEEEEeeccCCcccc------ccccch-h---HHH
Q 006648 317 YVCGAIAAAQSIRMSGS---TRDLVILVDETISAYHRSGLEAAGWKVRTIQRIRNPKAEK------DAYNEW-N---YSK 383 (637)
Q Consensus 317 YL~gAiVL~~SLr~~ns---~~dlVILvtd~ISee~r~~Lk~~g~~V~~I~~I~~P~~~~------~~~~~~-t---ysK 383 (637)
-...+.-++.||++..| ..+++|. .|+-.++..+.++..+..+..|.......... ..+... . +..
T Consensus 11 Rp~~l~r~LesLl~~~p~~~~~~liIs-~DG~~~~~~~~v~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~ia~hyk~al 89 (334)
T cd02514 11 RPDYLRRMLDSLLSYRPSAEKFPIIVS-QDGGYEEVADVAKSFGDGVTHIQHPPISIKNVNPPHKFQGYYRIARHYKWAL 89 (334)
T ss_pred CHHHHHHHHHHHHhccccCCCceEEEE-eCCCchHHHHHHHhhccccEEEEcccccccccCcccccchhhHHHHHHHHHH
Confidence 34556677788887642 3445554 45555556666666643333333211110000 011110 0 111
Q ss_pred HHHcccCCCceEEEecccccccCCchhhh
Q 006648 384 FRLWQLTDYDKIIFIDADLLILRNIDFLF 412 (637)
Q Consensus 384 L~Iw~LtdYDRVLYLDAD~LVL~nLDeLF 412 (637)
=.+++...|++||.||.|+++--+.=+.|
T Consensus 90 n~vF~~~~~~~vIILEDDl~~sPdFf~yf 118 (334)
T cd02514 90 TQTFNLFGYSFVIILEDDLDIAPDFFSYF 118 (334)
T ss_pred HHHHHhcCCCEEEEECCCCccCHhHHHHH
Confidence 22333347999999999999987744444
No 65
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=44.56 E-value=1.3e+02 Score=29.20 Aligned_cols=28 Identities=18% Similarity=0.318 Sum_probs=21.1
Q ss_pred hHHHHHHcccCCCceEEEecccccccCC
Q 006648 380 NYSKFRLWQLTDYDKIIFIDADLLILRN 407 (637)
Q Consensus 380 tysKL~Iw~LtdYDRVLYLDAD~LVL~n 407 (637)
.+.+-...+....|-|++||+|.++..+
T Consensus 73 ~~a~N~g~~~a~gd~i~~lD~D~~~~~~ 100 (219)
T cd06913 73 GYAKNQAIAQSSGRYLCFLDSDDVMMPQ 100 (219)
T ss_pred HHHHHHHHHhcCCCEEEEECCCccCChh
Confidence 3455555666788999999999987654
No 66
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=44.45 E-value=53 Score=31.69 Aligned_cols=79 Identities=18% Similarity=0.124 Sum_probs=38.2
Q ss_pred HHHHHHHHHHhCCCCcE-EEEEcCCCCHHHHHHHHHc---CCEEEEEeeccCCccccccccchhHHHHHHcccCCCceEE
Q 006648 321 AIAAAQSIRMSGSTRDL-VILVDETISAYHRSGLEAA---GWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKII 396 (637)
Q Consensus 321 AiVL~~SLr~~ns~~dl-VILvtd~ISee~r~~Lk~~---g~~V~~I~~I~~P~~~~~~~~~~tysKL~Iw~LtdYDRVL 396 (637)
+..++.||.......++ +|+++++-++.+.+.+++. +..+..+..-. ... .....-...+....|-|+
T Consensus 12 l~~~l~sl~~q~~~~~~eiiiVDd~S~d~t~~~~~~~~~~~~~i~~~~~~~-n~G-------~~~a~n~g~~~a~gd~i~ 83 (224)
T cd06442 12 IPELIERLDAALKGIDYEIIVVDDNSPDGTAEIVRELAKEYPRVRLIVRPG-KRG-------LGSAYIEGFKAARGDVIV 83 (224)
T ss_pred HHHHHHHHHHhhcCCCeEEEEEeCCCCCChHHHHHHHHHhCCceEEEecCC-CCC-------hHHHHHHHHHHcCCCEEE
Confidence 45566677653322334 4456666555555555443 22222221111 111 111222333334458899
Q ss_pred EecccccccCC
Q 006648 397 FIDADLLILRN 407 (637)
Q Consensus 397 YLDAD~LVL~n 407 (637)
+||+|.++..+
T Consensus 84 ~lD~D~~~~~~ 94 (224)
T cd06442 84 VMDADLSHPPE 94 (224)
T ss_pred EEECCCCCCHH
Confidence 99999887543
No 67
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=40.75 E-value=1e+02 Score=28.59 Aligned_cols=79 Identities=11% Similarity=0.128 Sum_probs=41.2
Q ss_pred HHHHHHHHHHh-CCCCcEEEEEcCCCCHHHHHHHHHcC----CEEEEEeeccCCccccccccchhHHHHHHcccCCCceE
Q 006648 321 AIAAAQSIRMS-GSTRDLVILVDETISAYHRSGLEAAG----WKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKI 395 (637)
Q Consensus 321 AiVL~~SLr~~-ns~~dlVILvtd~ISee~r~~Lk~~g----~~V~~I~~I~~P~~~~~~~~~~tysKL~Iw~LtdYDRV 395 (637)
..-++.||... .....++ +++++-++...+.+++.. .+++.+. ..+.. + .....+=...+....|-|
T Consensus 12 l~~~l~sl~~q~~~~~eii-vvdd~s~d~t~~~~~~~~~~~~~~~~~~~--~~~~~----~-~~~~~~n~g~~~a~g~~i 83 (182)
T cd06420 12 LELVLKSVLNQSILPFEVI-IADDGSTEETKELIEEFKSQFPIPIKHVW--QEDEG----F-RKAKIRNKAIAAAKGDYL 83 (182)
T ss_pred HHHHHHHHHhccCCCCEEE-EEeCCCchhHHHHHHHHHhhcCCceEEEE--cCCcc----h-hHHHHHHHHHHHhcCCEE
Confidence 44566777654 3344444 455555555555565442 2232221 11111 0 011122234455678999
Q ss_pred EEecccccccCC
Q 006648 396 IFIDADLLILRN 407 (637)
Q Consensus 396 LYLDAD~LVL~n 407 (637)
++||+|.++..+
T Consensus 84 ~~lD~D~~~~~~ 95 (182)
T cd06420 84 IFIDGDCIPHPD 95 (182)
T ss_pred EEEcCCcccCHH
Confidence 999999998655
No 68
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=39.76 E-value=1.9e+02 Score=28.92 Aligned_cols=25 Identities=20% Similarity=0.263 Sum_probs=17.0
Q ss_pred ccCCCceEEEecccccccCC-chhhh
Q 006648 388 QLTDYDKIIFIDADLLILRN-IDFLF 412 (637)
Q Consensus 388 ~LtdYDRVLYLDAD~LVL~n-LDeLF 412 (637)
.....|-|+++|+|..+-.+ |..++
T Consensus 90 ~~a~g~~i~~lD~D~~~~~~~l~~l~ 115 (243)
T PLN02726 90 KHASGDFVVIMDADLSHHPKYLPSFI 115 (243)
T ss_pred HHcCCCEEEEEcCCCCCCHHHHHHHH
Confidence 34567899999999986332 34444
No 69
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=39.46 E-value=1.1e+02 Score=33.66 Aligned_cols=167 Identities=10% Similarity=0.117 Sum_probs=77.8
Q ss_pred CCEEEEEEeecCcchHHHHHHHHHHHHHh-CCCCcE--EEEEcCCCCHHHHHHHHHcCCEEEEEeeccCCccccccccch
Q 006648 303 HREAYATILHSAHVYVCGAIAAAQSIRMS-GSTRDL--VILVDETISAYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEW 379 (637)
Q Consensus 303 ~R~AYVTlLtsdd~YL~gAiVL~~SLr~~-ns~~dl--VILvtd~ISee~r~~Lk~~g~~V~~I~~I~~P~~~~~~~~~~ 379 (637)
-+.+.+.+.+ ..|+...--.+.|-.++ -+++.+ +|+. |..+.--.-.|. -+-++..+ .+ +. ...+...
T Consensus 99 ~tIGL~vfA~--GkY~~fl~~Fl~SAek~Fm~g~~V~YYVFT-D~p~~vP~i~l~-~~r~~~V~-~v--~~--~~~Wqd~ 169 (337)
T PF03414_consen 99 ITIGLTVFAT--GKYIVFLKDFLESAEKHFMVGHRVIYYVFT-DQPSKVPRIELG-PGRRLKVF-EV--QE--EKRWQDI 169 (337)
T ss_dssp -EEEEEEEE---CCHHHHHHHHHHHHHHHBSTTSEEEEEEEE-S-GGGS-------TTEEEEEE-E---SG--GSSHHHH
T ss_pred ceEEEEEEec--ccHHHHHHHHHHhHHHhccCCcEEEEEEEe-CchhhCCccccC-CCceeEEE-Ee--cc--cCCCccc
Confidence 3455555444 47999888888888876 355554 4444 432210000011 11112111 11 11 1122223
Q ss_pred hHHHHHHcc-------cCCCceEEEecccccccCCchh-hhCCCCeeee------------------------c-C-CCC
Q 006648 380 NYSKFRLWQ-------LTDYDKIIFIDADLLILRNIDF-LFGMPEISAT------------------------G-N-NGT 425 (637)
Q Consensus 380 tysKL~Iw~-------LtdYDRVLYLDAD~LVL~nLDe-LFdlp~IaAv------------------------~-D-~~~ 425 (637)
+..|+.++. +.++|-+..+|+|+++.+++.. .+. +.++.. + + ..-
T Consensus 170 sm~Rm~~i~~~i~~~~~~EvDYLFc~dvd~~F~~~vGvE~Lg-~lva~LHp~~y~~~~~~FpYERrp~S~AyIp~~eGDf 248 (337)
T PF03414_consen 170 SMMRMEMISEHIEQHIQHEVDYLFCMDVDMVFQDHVGVEILG-DLVATLHPWFYFKPRESFPYERRPKSQAYIPYGEGDF 248 (337)
T ss_dssp HHHHHHHHHHHHHHCHHHH-SEEEEEESSEEE-S-B-GGG-S-SEEEEESTTTTTSTGGGS--B-STTSTTB--TT--S-
T ss_pred hhHHHHHHHHHHHHHHhhcCCEEEEEecceEEecccCHHHHH-HHHHHhCHHHHCCChhhCccccCccccccccCCCCCe
Confidence 455555543 2568999999999999988763 221 222211 0 1 234
Q ss_pred cccceEEEEecCH------HHHHHHHHHHHhcCCCCCCChhHHHHhcc---cceecCCccCcc
Q 006648 426 MFNSGVMVIEPSS------CTFQLLMDHINEFESYNGGDQGYLNEVFT---WWHRIPKHMNFL 479 (637)
Q Consensus 426 yFNSGVMVInPs~------~~fe~L~e~l~~~~sy~~~DQdiLN~vF~---~w~~LP~rYN~l 479 (637)
|+-+|+.-=.+.. .-.+.+++-.++.-.-...|..-||.+|- ..+.|++.|+.-
T Consensus 249 YY~ga~fGGt~~~vl~Lt~~c~~~i~~D~~n~I~A~WhDESHLNKYfl~~KPtKvLSPEY~Wd 311 (337)
T PF03414_consen 249 YYHGAFFGGTVEEVLRLTEACHQGIMQDKANGIEALWHDESHLNKYFLYHKPTKVLSPEYCWD 311 (337)
T ss_dssp -EECCEEEECHHHHHHHHHHHHHHHHHHHHTT---TTCHHHHHHHHHHHS--SEEE-GGGSBS
T ss_pred EEeceecCCcHHHHHHHHHHHHHHHHhhhhcCceEeccchhhhHHHHhhCCCceecCHHHccC
Confidence 6666666544321 11222222222221224789999999985 467899999874
No 70
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=38.07 E-value=62 Score=35.17 Aligned_cols=21 Identities=14% Similarity=0.243 Sum_probs=17.1
Q ss_pred cccCCCceEEEecccccccCC
Q 006648 387 WQLTDYDKIIFIDADLLILRN 407 (637)
Q Consensus 387 w~LtdYDRVLYLDAD~LVL~n 407 (637)
.+...+|-|+++|+|+++-.+
T Consensus 122 ~~~a~ge~i~~~DaD~~~~p~ 142 (373)
T TIGR03472 122 LPHARHDILVIADSDISVGPD 142 (373)
T ss_pred HHhccCCEEEEECCCCCcChh
Confidence 344679999999999999654
No 71
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=35.77 E-value=1.7e+02 Score=32.67 Aligned_cols=93 Identities=13% Similarity=0.063 Sum_probs=46.6
Q ss_pred CCEEEEEEeecCcchHHHHHHHHHHHHHh-CCCCcEEEEEcCCCCHHHHHHHHHc---CCEEEEEeeccCCccccccccc
Q 006648 303 HREAYATILHSAHVYVCGAIAAAQSIRMS-GSTRDLVILVDETISAYHRSGLEAA---GWKVRTIQRIRNPKAEKDAYNE 378 (637)
Q Consensus 303 ~R~AYVTlLtsdd~YL~gAiVL~~SLr~~-ns~~dlVILvtd~ISee~r~~Lk~~---g~~V~~I~~I~~P~~~~~~~~~ 378 (637)
++.+.+.-.++.+.. ..-++.|+.+. .++++++| ++|+-++++.+.+++. ..+++.+.. .....+..+
T Consensus 75 p~vsViIP~yNE~~~---i~~~l~sll~q~yp~~eIiv-VdDgs~D~t~~~~~~~~~~~~~v~vv~~-~~n~Gka~A--- 146 (444)
T PRK14583 75 PLVSILVPCFNEGLN---ARETIHAALAQTYTNIEVIA-INDGSSDDTAQVLDALLAEDPRLRVIHL-AHNQGKAIA--- 146 (444)
T ss_pred CcEEEEEEeCCCHHH---HHHHHHHHHcCCCCCeEEEE-EECCCCccHHHHHHHHHHhCCCEEEEEe-CCCCCHHHH---
Confidence 455555555544433 34556676643 45666554 4555555555544432 223332221 111111111
Q ss_pred hhHHHHHHcccCCCceEEEecccccccCC
Q 006648 379 WNYSKFRLWQLTDYDKIIFIDADLLILRN 407 (637)
Q Consensus 379 ~tysKL~Iw~LtdYDRVLYLDAD~LVL~n 407 (637)
.=......++|-|+.+|+|.++-.|
T Consensus 147 ----lN~gl~~a~~d~iv~lDAD~~~~~d 171 (444)
T PRK14583 147 ----LRMGAAAARSEYLVCIDGDALLDKN 171 (444)
T ss_pred ----HHHHHHhCCCCEEEEECCCCCcCHH
Confidence 1111223578999999999998665
No 72
>PF05704 Caps_synth: Capsular polysaccharide synthesis protein; InterPro: IPR008441 This entry consists of several capsular polysaccharide proteins. Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae. This family is often transcribed with putative glycosyl transferases to give rise to bifunctional proteins [].
Probab=35.01 E-value=92 Score=33.07 Aligned_cols=128 Identities=11% Similarity=0.111 Sum_probs=74.6
Q ss_pred CCCCEEEEEEeecCcchHHHHHHHHHHHHHhCCCCcEEEEEcCCCCHH------HHHHHHHcCCEEEEEeeccCCccccc
Q 006648 301 SVHREAYATILHSAHVYVCGAIAAAQSIRMSGSTRDLVILVDETISAY------HRSGLEAAGWKVRTIQRIRNPKAEKD 374 (637)
Q Consensus 301 ~~~R~AYVTlLtsdd~YL~gAiVL~~SLr~~ns~~dlVILvtd~ISee------~r~~Lk~~g~~V~~I~~I~~P~~~~~ 374 (637)
..++..|+.-..+.++-=.-+..++.|+++++++++++++-.+++.+- -.++++. .
T Consensus 43 ~~~k~IW~~W~QG~e~aP~~Vk~ci~s~~k~~~~~~Vi~lt~~Ni~~Yv~~P~~i~~k~~~------------------g 104 (276)
T PF05704_consen 43 TNEKIIWVCWWQGEENAPEIVKKCINSWRKNAPDYEVILLTEDNIKDYVDIPDFILEKYEK------------------G 104 (276)
T ss_pred CCCCcEEEEECCCccccCHHHHHHHHHHHHHCCCCeEEEEChHHHHHHcCCchhHHHHHHc------------------C
Confidence 455668888876544443345789999999999999998764433221 1111110 0
Q ss_pred cccc---hhHHHHHHcccCCCceEEEecccccccCCchhhhC-CCCeeee--cCC-----CCcccceEEEEecCHHHHHH
Q 006648 375 AYNE---WNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFG-MPEISAT--GNN-----GTMFNSGVMVIEPSSCTFQL 443 (637)
Q Consensus 375 ~~~~---~tysKL~Iw~LtdYDRVLYLDAD~LVL~nLDeLFd-lp~IaAv--~D~-----~~yFNSGVMVInPs~~~fe~ 443 (637)
..+. .-+.|+.+-. .|. =+|+||++++.+++++.+. .+.++-. +.. .....+++|.-.++...++.
T Consensus 105 ~i~~a~~SDilR~~LL~--~yG-GvWiDatv~~t~~l~~~~~~~~ff~~~~~~~~~~~~~~~~w~~~fi~a~~~n~~~~~ 181 (276)
T PF05704_consen 105 KISPAHFSDILRLALLY--KYG-GVWIDATVYLTKPLDDEIFDSDFFSFSRPDKDYNPISISSWTNFFIAAKKGNPFIKF 181 (276)
T ss_pred CCchhHHHHHHHHHHHH--HcC-cEEeCCceEECCchhHHHhcCCeeEEeccCcCcccchHHHhHhhheeECCCCHHHHH
Confidence 1111 2345554432 222 3799999999999997754 4433321 111 12345567777777777766
Q ss_pred HHHHHH
Q 006648 444 LMDHIN 449 (637)
Q Consensus 444 L~e~l~ 449 (637)
+.+.+.
T Consensus 182 ~~~~~~ 187 (276)
T PF05704_consen 182 WRDLLL 187 (276)
T ss_pred HHHHHH
Confidence 666553
No 73
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=33.42 E-value=18 Score=39.69 Aligned_cols=37 Identities=27% Similarity=0.551 Sum_probs=34.3
Q ss_pred hHHHHHHcccCCCceEEEecccccccCCchhhhCCCC
Q 006648 380 NYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPE 416 (637)
Q Consensus 380 tysKL~Iw~LtdYDRVLYLDAD~LVL~nLDeLFdlp~ 416 (637)
.+.++.+|.+.++.+.+|+|.|+-+..+++++|+.+.
T Consensus 113 ~~~~~~~~~~~~~~a~i~~~~~i~~~~~~~~~~~v~~ 149 (369)
T KOG1950|consen 113 RDDKIKIWRLIEDGAAIYLVDDIQRFRNDDANFDVPN 149 (369)
T ss_pred cccceeecceeccCceEEEecchhhccCccccccccc
Confidence 3788999999999999999999999999999999874
No 74
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=32.79 E-value=2.3e+02 Score=26.73 Aligned_cols=23 Identities=13% Similarity=0.153 Sum_probs=17.1
Q ss_pred HHcccCCCceEEEecccccccCC
Q 006648 385 RLWQLTDYDKIIFIDADLLILRN 407 (637)
Q Consensus 385 ~Iw~LtdYDRVLYLDAD~LVL~n 407 (637)
..++....|=|+++|+|.++-.+
T Consensus 77 ~g~~~a~~d~i~~ld~D~~~~~~ 99 (202)
T cd04184 77 SALELATGEFVALLDHDDELAPH 99 (202)
T ss_pred HHHHhhcCCEEEEECCCCcCChH
Confidence 33444567999999999988654
No 75
>PRK10073 putative glycosyl transferase; Provisional
Probab=31.73 E-value=1.5e+02 Score=31.92 Aligned_cols=91 Identities=14% Similarity=0.057 Sum_probs=47.6
Q ss_pred CEEEEEEeecCcchHHHHHHHHHHHHHh-CCCCcEEEEEcCCCCHHHHHHHHHc---CCEEEEEeeccCCccccccccch
Q 006648 304 REAYATILHSAHVYVCGAIAAAQSIRMS-GSTRDLVILVDETISAYHRSGLEAA---GWKVRTIQRIRNPKAEKDAYNEW 379 (637)
Q Consensus 304 R~AYVTlLtsdd~YL~gAiVL~~SLr~~-ns~~dlVILvtd~ISee~r~~Lk~~---g~~V~~I~~I~~P~~~~~~~~~~ 379 (637)
....+.-++..+.|+. -++.||... .++.. +|+++|+-++.+.+.+++. ...+..+. .+... .
T Consensus 7 ~vSVIIP~yN~~~~L~---~~l~Sl~~Qt~~~~E-IIiVdDgStD~t~~i~~~~~~~~~~i~vi~---~~n~G------~ 73 (328)
T PRK10073 7 KLSIIIPLYNAGKDFR---AFMESLIAQTWTALE-IIIVNDGSTDNSVEIAKHYAENYPHVRLLH---QANAG------V 73 (328)
T ss_pred eEEEEEeccCCHHHHH---HHHHHHHhCCCCCeE-EEEEeCCCCccHHHHHHHHHhhCCCEEEEE---CCCCC------h
Confidence 3444444444455554 455777653 23333 4556676666666666543 22333222 11110 1
Q ss_pred hHHHHHHcccCCCceEEEecccccccCC
Q 006648 380 NYSKFRLWQLTDYDKIIFIDADLLILRN 407 (637)
Q Consensus 380 tysKL~Iw~LtdYDRVLYLDAD~LVL~n 407 (637)
...+=...+...-|-|+++|+|-.+..+
T Consensus 74 ~~arN~gl~~a~g~yi~flD~DD~~~p~ 101 (328)
T PRK10073 74 SVARNTGLAVATGKYVAFPDADDVVYPT 101 (328)
T ss_pred HHHHHHHHHhCCCCEEEEECCCCccChh
Confidence 1122233344566889999999998765
No 76
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]
Probab=31.59 E-value=81 Score=34.60 Aligned_cols=62 Identities=26% Similarity=0.483 Sum_probs=39.3
Q ss_pred cceEEEEecCCCCCCCcch-----------h---hHHHHHHHHHHhhhhccCCCccEEEEEEecccCCC--Ccccccccc
Q 006648 195 RINLIAVKLPCRNEGNWSK-----------D---VARLHLQLAAADLAASEKGAYPVHLLLITKCFPIP--NLFPCKELV 258 (637)
Q Consensus 195 ~~~~~~~~~pc~~~~~~~r-----------~---v~rl~~~l~~a~~a~~~~~~~~~~v~~~~~c~p~~--~~f~c~~l~ 258 (637)
.+|-|.+-.||++.+-+.| | ..+||.+|..+-+..-..|. +|+-|.|.-.+ |=..+...+
T Consensus 229 ~fD~iLlDaPCSg~G~irr~Pd~~~~~~~~~i~~l~~lQ~~iL~~a~~~lk~GG----~LVYSTCS~~~eENE~vV~~~L 304 (355)
T COG0144 229 KFDRILLDAPCSGTGVIRRDPDVKWRRTPEDIAELAKLQKEILAAALKLLKPGG----VLVYSTCSLTPEENEEVVERFL 304 (355)
T ss_pred cCcEEEECCCCCCCcccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCC----EEEEEccCCchhcCHHHHHHHH
Confidence 6999999999987543322 2 56778888776666222233 77888886554 444444444
Q ss_pred cc
Q 006648 259 TR 260 (637)
Q Consensus 259 ~~ 260 (637)
++
T Consensus 305 ~~ 306 (355)
T COG0144 305 ER 306 (355)
T ss_pred Hh
Confidence 43
No 77
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=31.52 E-value=2e+02 Score=30.67 Aligned_cols=77 Identities=25% Similarity=0.232 Sum_probs=40.5
Q ss_pred HHHHHHHHHhCC-CC-cEEEEEcCCCCHHHHHHHHHcCCEEEEEe-ecc-CCccccccccchhHHHHHHcccCCCceEEE
Q 006648 322 IAAAQSIRMSGS-TR-DLVILVDETISAYHRSGLEAAGWKVRTIQ-RIR-NPKAEKDAYNEWNYSKFRLWQLTDYDKIIF 397 (637)
Q Consensus 322 iVL~~SLr~~ns-~~-dlVILvtd~ISee~r~~Lk~~g~~V~~I~-~I~-~P~~~~~~~~~~tysKL~Iw~LtdYDRVLY 397 (637)
.-++.||..... .. .-+|+++++-++.+.+.+++.+.+++... .+. .+... . . ..+. -........|-|++
T Consensus 47 ~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~~~~~v~~~~~~~~~~~~n~-G-k-g~A~--~~g~~~a~gd~vv~ 121 (306)
T PRK13915 47 GKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAAAGARVVSREEILPELPPRP-G-K-GEAL--WRSLAATTGDIVVF 121 (306)
T ss_pred HHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHHhcchhhcchhhhhccccCC-C-H-HHHH--HHHHHhcCCCEEEE
Confidence 345566665321 22 23555777777777888888876653311 111 01100 0 0 0111 11233456799999
Q ss_pred eccccc
Q 006648 398 IDADLL 403 (637)
Q Consensus 398 LDAD~L 403 (637)
+|+|..
T Consensus 122 lDaD~~ 127 (306)
T PRK13915 122 VDADLI 127 (306)
T ss_pred EeCccc
Confidence 999997
No 78
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=31.16 E-value=3.5e+02 Score=29.06 Aligned_cols=90 Identities=19% Similarity=0.133 Sum_probs=43.5
Q ss_pred EEEEEeecCcchHHHHHHHHHHHH-HhCCCCcEEEEEcCCCCHHHHHHHHHc----CCEEEEEeeccCCccccccccchh
Q 006648 306 AYATILHSAHVYVCGAIAAAQSIR-MSGSTRDLVILVDETISAYHRSGLEAA----GWKVRTIQRIRNPKAEKDAYNEWN 380 (637)
Q Consensus 306 AYVTlLtsdd~YL~gAiVL~~SLr-~~ns~~dlVILvtd~ISee~r~~Lk~~----g~~V~~I~~I~~P~~~~~~~~~~t 380 (637)
..|.-....+..++..+-.+.+.. +...++. +|+++|+-++.+.+.+++. +.+++.+..-.+ ....
T Consensus 9 SVVIP~yNE~~~i~~~l~~l~~~~~~~~~~~E-IIvVDDgS~D~T~~il~~~~~~~~~~v~~i~~~~n-~G~~------- 79 (325)
T PRK10714 9 SVVIPVYNEQESLPELIRRTTAACESLGKEYE-ILLIDDGSSDNSAEMLVEAAQAPDSHIVAILLNRN-YGQH------- 79 (325)
T ss_pred EEEEcccCchhhHHHHHHHHHHHHHhCCCCEE-EEEEeCCCCCcHHHHHHHHHhhcCCcEEEEEeCCC-CCHH-------
Confidence 333333444455554443333322 2333344 4456666666665555442 445544321111 1111
Q ss_pred HHHHHHcccCCCceEEEecccccc
Q 006648 381 YSKFRLWQLTDYDKIIFIDADLLI 404 (637)
Q Consensus 381 ysKL~Iw~LtdYDRVLYLDAD~LV 404 (637)
......++....|-|+++|+|...
T Consensus 80 ~A~~~G~~~A~gd~vv~~DaD~q~ 103 (325)
T PRK10714 80 SAIMAGFSHVTGDLIITLDADLQN 103 (325)
T ss_pred HHHHHHHHhCCCCEEEEECCCCCC
Confidence 112233344578999999999985
No 79
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=29.85 E-value=1.7e+02 Score=32.68 Aligned_cols=95 Identities=11% Similarity=-0.036 Sum_probs=47.9
Q ss_pred CCCEEEEEEeecCcchHHHHHHHHHHHHHhC-CCCcE-EEEEcCCCCHHHHHHHHH---cCCEEEEEeeccCCccccccc
Q 006648 302 VHREAYATILHSAHVYVCGAIAAAQSIRMSG-STRDL-VILVDETISAYHRSGLEA---AGWKVRTIQRIRNPKAEKDAY 376 (637)
Q Consensus 302 ~~R~AYVTlLtsdd~YL~gAiVL~~SLr~~n-s~~dl-VILvtd~ISee~r~~Lk~---~g~~V~~I~~I~~P~~~~~~~ 376 (637)
.++.+.+.-.+..+ ....-++.||.... +...+ +++++++-++++.+.+++ .+..+..+ .+....+...+
T Consensus 48 ~P~vsVIIP~yNe~---~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v~v~-~~~~~~Gka~A- 122 (439)
T TIGR03111 48 LPDITIIIPVYNSE---DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGLSLR-YMNSDQGKAKA- 122 (439)
T ss_pred CCCEEEEEEeCCCh---HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCeEEE-EeCCCCCHHHH-
Confidence 34455555455443 33455667776543 43334 566777777777665543 22222211 11111111111
Q ss_pred cchhHHHHHHcccCCCceEEEecccccccCC
Q 006648 377 NEWNYSKFRLWQLTDYDKIIFIDADLLILRN 407 (637)
Q Consensus 377 ~~~tysKL~Iw~LtdYDRVLYLDAD~LVL~n 407 (637)
.=...+....|-|+++|+|.++-.|
T Consensus 123 ------lN~gl~~s~g~~v~~~DaD~~~~~d 147 (439)
T TIGR03111 123 ------LNAAIYNSIGKYIIHIDSDGKLHKD 147 (439)
T ss_pred ------HHHHHHHccCCEEEEECCCCCcChH
Confidence 1112223445679999999999654
No 80
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=29.62 E-value=3.5e+02 Score=25.19 Aligned_cols=24 Identities=29% Similarity=0.290 Sum_probs=16.9
Q ss_pred CCCceEEEecccccccCC-chhhhC
Q 006648 390 TDYDKIIFIDADLLILRN-IDFLFG 413 (637)
Q Consensus 390 tdYDRVLYLDAD~LVL~n-LDeLFd 413 (637)
...|-|+++|+|...-.+ +..+.+
T Consensus 79 a~~d~i~~~D~D~~~~~~~l~~l~~ 103 (181)
T cd04187 79 ARGDAVITMDADLQDPPELIPEMLA 103 (181)
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHH
Confidence 345889999999987543 455544
No 81
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=29.61 E-value=1.2e+02 Score=28.13 Aligned_cols=88 Identities=15% Similarity=0.070 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHhCC---CCcEEEEEcCCCCHHHHHHHHHcCCEEEEEeeccCCccccccccchhHHHHHHcccCCCceEE
Q 006648 320 GAIAAAQSIRMSGS---TRDLVILVDETISAYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKII 396 (637)
Q Consensus 320 gAiVL~~SLr~~ns---~~dlVILvtd~ISee~r~~Lk~~g~~V~~I~~I~~P~~~~~~~~~~tysKL~Iw~LtdYDRVL 396 (637)
.+.-++.||.+... .+. +|+++++-++...+.+++.+.+...+..+..+.... .....-...+...-|=|+
T Consensus 11 ~l~~~l~sl~~~~~~~~~~e-iivvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~n~G-----~~~a~n~g~~~a~gd~i~ 84 (185)
T cd04179 11 NIPELVERLLAVLEEGYDYE-IIVVDDGSTDGTAEIARELAARVPRVRVIRLSRNFG-----KGAAVRAGFKAARGDIVV 84 (185)
T ss_pred hHHHHHHHHHHHhccCCCEE-EEEEcCCCCCChHHHHHHHHHhCCCeEEEEccCCCC-----ccHHHHHHHHHhcCCEEE
Confidence 34456777776543 333 444555555556666665433221111121111100 111222333333348899
Q ss_pred EecccccccCC-chhhhC
Q 006648 397 FIDADLLILRN-IDFLFG 413 (637)
Q Consensus 397 YLDAD~LVL~n-LDeLFd 413 (637)
+||+|..+..+ ++.|..
T Consensus 85 ~lD~D~~~~~~~l~~l~~ 102 (185)
T cd04179 85 TMDADLQHPPEDIPKLLE 102 (185)
T ss_pred EEeCCCCCCHHHHHHHHH
Confidence 99999988655 555554
No 82
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=29.25 E-value=2.6e+02 Score=27.24 Aligned_cols=17 Identities=35% Similarity=0.436 Sum_probs=14.1
Q ss_pred CCceEEEecccccccCC
Q 006648 391 DYDKIIFIDADLLILRN 407 (637)
Q Consensus 391 dYDRVLYLDAD~LVL~n 407 (637)
.+|=|+++|+|.++-.+
T Consensus 84 ~~d~i~~lD~D~~~~~~ 100 (236)
T cd06435 84 DAEIIAVIDADYQVEPD 100 (236)
T ss_pred CCCEEEEEcCCCCcCHH
Confidence 48999999999987554
No 83
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=28.98 E-value=3.6e+02 Score=28.05 Aligned_cols=39 Identities=23% Similarity=0.376 Sum_probs=26.4
Q ss_pred CCCceEEEecccccccCC-chhhh----CCCCeeeecCCCCccc
Q 006648 390 TDYDKIIFIDADLLILRN-IDFLF----GMPEISATGNNGTMFN 428 (637)
Q Consensus 390 tdYDRVLYLDAD~LVL~n-LDeLF----dlp~IaAv~D~~~yFN 428 (637)
..||-|+.+|||+++..+ |..+. .-|.++++--...++|
T Consensus 94 ~~~~~i~~~DaD~~~~p~~l~~~v~~~~~~~~vg~vq~~~~~~n 137 (254)
T cd04191 94 SRYDYMVVLDADSLMSGDTIVRLVRRMEANPRAGIIQTAPKLIG 137 (254)
T ss_pred CCCCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEeCCceeEC
Confidence 578999999999999877 44443 3456777743333344
No 84
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=28.69 E-value=1.5e+02 Score=25.35 Aligned_cols=70 Identities=17% Similarity=0.189 Sum_probs=37.8
Q ss_pred CCcEEEEEcCCCCHHHHHHHHHcC-CEEEEEeeccCCccccccccchhHHHHHHcccCCCceEEEecccccccCCc
Q 006648 334 TRDLVILVDETISAYHRSGLEAAG-WKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNI 408 (637)
Q Consensus 334 ~~dlVILvtd~ISee~r~~Lk~~g-~~V~~I~~I~~P~~~~~~~~~~tysKL~Iw~LtdYDRVLYLDAD~LVL~nL 408 (637)
..+-+++++++-++.+.+.|++.. ..++.. ..+.... .....+.+..+-...+++=|+++|+|=++.-+-
T Consensus 18 G~d~i~i~d~~s~D~t~~~l~~~~~v~i~~~---~~~~~~~--~~~~~~~~~~~~~~~~~dWvl~~D~DEfl~~~~ 88 (97)
T PF13704_consen 18 GVDHIYIYDDGSTDGTREILRALPGVGIIRW---VDPYRDE--RRQRAWRNALIERAFDADWVLFLDADEFLVPPP 88 (97)
T ss_pred CCCEEEEEECCCCccHHHHHHhCCCcEEEEe---CCCccch--HHHHHHHHHHHHhCCCCCEEEEEeeeEEEecCC
Confidence 356556677777777788887762 233221 1122110 011123333333345789999999998776543
No 85
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=27.37 E-value=4e+02 Score=28.63 Aligned_cols=42 Identities=17% Similarity=0.082 Sum_probs=30.2
Q ss_pred CCCCCEEEEEEeecCcchHHHHHHHHHHHHHhCCCCc--EEEEEcC
Q 006648 300 GSVHREAYATILHSAHVYVCGAIAAAQSIRMSGSTRD--LVILVDE 343 (637)
Q Consensus 300 ~~~~R~AYVTlLtsdd~YL~gAiVL~~SLr~~ns~~d--lVILvtd 343 (637)
....+..++|-+-....|++.-.-++.+| +.|+.. +-+|+++
T Consensus 22 ~~~e~VLILtplrna~~~l~~y~~~L~~L--~YP~~lIsLgfLv~d 65 (269)
T PF03452_consen 22 RNKESVLILTPLRNAASFLPDYFDNLLSL--TYPHELISLGFLVSD 65 (269)
T ss_pred ccCCeEEEEEecCCchHHHHHHHHHHHhC--CCCchheEEEEEcCC
Confidence 45778889999987788988888888887 445443 4455543
No 86
>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed
Probab=27.04 E-value=1e+02 Score=35.35 Aligned_cols=61 Identities=25% Similarity=0.384 Sum_probs=36.6
Q ss_pred cceEEEEecCCCCCCCcchh--------------hHHHHHHHHHHhhh-hccCCCccEEEEEEecccCC--CCccccccc
Q 006648 195 RINLIAVKLPCRNEGNWSKD--------------VARLHLQLAAADLA-ASEKGAYPVHLLLITKCFPI--PNLFPCKEL 257 (637)
Q Consensus 195 ~~~~~~~~~pc~~~~~~~r~--------------v~rl~~~l~~a~~a-~~~~~~~~~~v~~~~~c~p~--~~~f~c~~l 257 (637)
.+|.|.|-.||++.+-+.|| ..+||.+|..+-.. .+. |. +|+-|.|--. -|=-.+..+
T Consensus 183 ~fD~ILvDaPCSG~G~~rk~p~~~~~~s~~~v~~l~~lQ~~iL~~A~~~Lkp-GG----~LVYSTCT~~~eENE~vV~~~ 257 (470)
T PRK11933 183 TFDAILLDAPCSGEGTVRKDPDALKNWSPESNLEIAATQRELIESAFHALKP-GG----TLVYSTCTLNREENQAVCLWL 257 (470)
T ss_pred hcCeEEEcCCCCCCcccccCHHHhhhCCHHHHHHHHHHHHHHHHHHHHHcCC-Cc----EEEEECCCCCHHHHHHHHHHH
Confidence 58999999999987665554 45677776654333 121 22 5567888633 344444444
Q ss_pred ccc
Q 006648 258 VTR 260 (637)
Q Consensus 258 ~~~ 260 (637)
+++
T Consensus 258 L~~ 260 (470)
T PRK11933 258 KET 260 (470)
T ss_pred HHH
Confidence 443
No 87
>PF02485 Branch: Core-2/I-Branching enzyme; InterPro: IPR003406 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase family 14 GT14 from CAZY, a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme (2.4.1.150 from EC) and core-2 branching enzyme (2.4.1.102 from EC). I-branching enzyme, an integral membrane protein, converts linear into branched poly-N-acetyllactosaminoglycans in the glycosylation pathway, and is responsible for the production of the blood group I-antigen during embryonic development []. Core-2 branching enzyme, also an integral membrane protein, forms crucial side-chain branches in O-glycans in the glycosylation pathway [].; GO: 0008375 acetylglucosaminyltransferase activity, 0016020 membrane; PDB: 3OTK_D 2GAM_A 2GAK_B.
Probab=26.53 E-value=2.1e+02 Score=28.91 Aligned_cols=102 Identities=13% Similarity=0.101 Sum_probs=51.8
Q ss_pred EEEEEEeecCcchHHHHHHHHHHHHHhCCCCcEEEEEcCCCCHHHHHHHHH---cCCEEEEEe-eccCCccccccccc-h
Q 006648 305 EAYATILHSAHVYVCGAIAAAQSIRMSGSTRDLVILVDETISAYHRSGLEA---AGWKVRTIQ-RIRNPKAEKDAYNE-W 379 (637)
Q Consensus 305 ~AYVTlLtsdd~YL~gAiVL~~SLr~~ns~~dlVILvtd~ISee~r~~Lk~---~g~~V~~I~-~I~~P~~~~~~~~~-~ 379 (637)
.||+.+++.+ -...+..+++.|. .++..++|.++..-+....+.+++ ....++.++ ++. .. -+.++. .
T Consensus 1 iAylil~h~~--~~~~~~~l~~~l~--~~~~~f~iHiD~k~~~~~~~~~~~~~~~~~nv~~v~~r~~--v~-WG~~S~v~ 73 (244)
T PF02485_consen 1 IAYLILAHKN--DPEQLERLLRLLY--HPDNDFYIHIDKKSPDYFYEEIKKLISCFPNVHFVPKRVD--VR-WGGFSLVE 73 (244)
T ss_dssp EEEEEEESS----HHHHHHHHHHH----TTSEEEEEE-TTS-HHHHHHHHHHHCT-TTEEE-SS--------TTSHHHHH
T ss_pred CEEEEEecCC--CHHHHHHHHHHhc--CCCCEEEEEEcCCCChHHHHHHHHhcccCCceeecccccc--cc-cCCccHHH
Confidence 4888877652 4566666777666 667778888877766666666664 233344433 111 00 011111 0
Q ss_pred hHHHHHH--cc-cCCCceEEEecccccccCCchhhhC
Q 006648 380 NYSKFRL--WQ-LTDYDKIIFIDADLLILRNIDFLFG 413 (637)
Q Consensus 380 tysKL~I--w~-LtdYDRVLYLDAD~LVL~nLDeLFd 413 (637)
+-.++.- .+ -.++|.++.|..+-+.+.+.+++.+
T Consensus 74 A~l~ll~~al~~~~~~~y~~llSg~D~Pl~s~~~i~~ 110 (244)
T PF02485_consen 74 ATLNLLREALKRDGDWDYFILLSGQDYPLKSNEEIHE 110 (244)
T ss_dssp HHHHHHHHHHHH-S---EEEEEETTEEESS-HHHHHH
T ss_pred HHHHHHHHHHhcCCCCcEEEEcccccccccchHHHHH
Confidence 1112221 12 1489999999999999999888864
No 88
>PF01793 Glyco_transf_15: Glycolipid 2-alpha-mannosyltransferase; InterPro: IPR002685 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This entry represents a family of fungi mannosyl-transferases involved in N-linked and O-linked glycosylation of proteins. They belong to the glycosyltransferase family 15 (GT15 from CAZY). Some of the enzymes in this family have been shown to be involved in O- and N-linked glycan modifications in the Golgi [].; GO: 0000030 mannosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 1S4P_A 1S4O_A 1S4N_A.
Probab=23.67 E-value=2.1e+02 Score=31.50 Aligned_cols=107 Identities=21% Similarity=0.317 Sum_probs=52.2
Q ss_pred CCCCEEEEEEeecCcchHHHHHHHHHHHHHh-CC--CCcEEEEEcCCCCHHHHHHHHHc-CCEEE--EEe--eccCCccc
Q 006648 301 SVHREAYATILHSAHVYVCGAIAAAQSIRMS-GS--TRDLVILVDETISAYHRSGLEAA-GWKVR--TIQ--RIRNPKAE 372 (637)
Q Consensus 301 ~~~R~AYVTlLtsdd~YL~gAiVL~~SLr~~-ns--~~dlVILvtd~ISee~r~~Lk~~-g~~V~--~I~--~I~~P~~~ 372 (637)
...+-|+|+++.. .=|.+++-+++||.+. |. +||.|+|.+..++++-++.+++. ..++. .|. ....|...
T Consensus 53 ~r~~Aafv~LvrN--~dL~~~l~SI~~lE~rFN~kf~YpwvFlnd~pFteeFk~~i~~~~~~~v~F~~Ip~e~W~~P~~I 130 (328)
T PF01793_consen 53 PRENAAFVMLVRN--SDLEGLLSSIRSLEDRFNKKFNYPWVFLNDEPFTEEFKEAISNATSGKVEFGLIPKEHWSYPDWI 130 (328)
T ss_dssp S---EEEEEE--G--GGHHHHHHHHHHHHHHTTTTS---EEEEESS---HHHHHHHHHH-SS-EEEEE--GGGSS--TTS
T ss_pred CCCceEEEEEEEc--hhHHHHHHHHHHHHHHccCCCCCCEEEEeCCCCCHHHHHHHHHhhcCceEEEEeCHHHcCCCCcC
Confidence 5678889987653 3499999999999874 44 68899999999999988888665 33433 222 12222210
Q ss_pred ---c-------c-----cccch----hHHHHH---Hc---ccCCCceEEEecccccccCCch
Q 006648 373 ---K-------D-----AYNEW----NYSKFR---LW---QLTDYDKIIFIDADLLILRNID 409 (637)
Q Consensus 373 ---~-------~-----~~~~~----tysKL~---Iw---~LtdYDRVLYLDAD~LVL~nLD 409 (637)
+ . .+... ...|+. .| .|.+||=.-=+++|+-+.-||+
T Consensus 131 D~~~a~~~~~~~~~~~v~yg~s~sYr~McRf~SG~F~~hp~l~~ydyyWRvEP~v~~~Cdi~ 192 (328)
T PF01793_consen 131 DQEKAAESREKMAEEGVPYGDSESYRHMCRFYSGFFYRHPLLQDYDYYWRVEPDVKFYCDID 192 (328)
T ss_dssp -HHHHHHHHHHHTT-TSTTTT-HHHHHHHHHHHHTGGGSGGGTT-SEEEE--TT-EE-S---
T ss_pred CHHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHhhhcChhhcCccEEEEeCCCceeecCCC
Confidence 0 0 01111 122322 23 3478999999999999988885
No 89
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=22.96 E-value=2.6e+02 Score=27.22 Aligned_cols=21 Identities=19% Similarity=0.338 Sum_probs=17.5
Q ss_pred CCceEEEecccccccCC-chhh
Q 006648 391 DYDKIIFIDADLLILRN-IDFL 411 (637)
Q Consensus 391 dYDRVLYLDAD~LVL~n-LDeL 411 (637)
++|-|+++|+|+++-.+ ++.+
T Consensus 75 ~~d~v~~lD~D~~~~~~~l~~l 96 (237)
T cd02526 75 GADYVLLFDQDSVPPPDMVEKL 96 (237)
T ss_pred CCCEEEEECCCCCcCHhHHHHH
Confidence 68999999999998765 5555
No 90
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=22.43 E-value=3.8e+02 Score=32.34 Aligned_cols=112 Identities=22% Similarity=0.251 Sum_probs=55.8
Q ss_pred CCCEEEEEEeecCcc--hH-HHHHHHHHHHHHhCC--CCcEEEEEcCCCCHHH-------HHHHHH-c--CCEEEEEeec
Q 006648 302 VHREAYATILHSAHV--YV-CGAIAAAQSIRMSGS--TRDLVILVDETISAYH-------RSGLEA-A--GWKVRTIQRI 366 (637)
Q Consensus 302 ~~R~AYVTlLtsdd~--YL-~gAiVL~~SLr~~ns--~~dlVILvtd~ISee~-------r~~Lk~-~--g~~V~~I~~I 366 (637)
..+.+.+.=++. ++ .+ ..+.++..||...+. +++++|+ +|+-+++. .+.|.+ . +.++....+.
T Consensus 123 ~~~VaVliP~yN-Ed~~~v~~~L~a~~~Sl~~~~~~~~~e~~vL-dD~~d~~~~~~e~~~~~~L~~~~~~~~~i~yr~R~ 200 (691)
T PRK05454 123 EARTAILMPIYN-EDPARVFAGLRAMYESLAATGHGAHFDFFIL-SDTRDPDIAAAEEAAWLELRAELGGEGRIFYRRRR 200 (691)
T ss_pred CCceEEEEeCCC-CChHHHHHHHHHHHHHHHhcCCCCCEEEEEE-ECCCChhHHHHHHHHHHHHHHhcCCCCcEEEEECC
Confidence 445555544443 33 22 355677888887654 4666554 55544332 123332 2 2344433333
Q ss_pred cCCccccccccchhHHHHHHcccCCCceEEEecccccccCC-chhhh---C-CCCeeee
Q 006648 367 RNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRN-IDFLF---G-MPEISAT 420 (637)
Q Consensus 367 ~~P~~~~~~~~~~tysKL~Iw~LtdYDRVLYLDAD~LVL~n-LDeLF---d-lp~IaAv 420 (637)
.+...+..+. ..+.+ .+. ..||-|+.||||+++-+| +..+- + -|.++++
T Consensus 201 ~n~~~KaGNl--~~~~~--~~~-~~~eyivvLDADs~m~~d~L~~lv~~m~~dP~vGlV 254 (691)
T PRK05454 201 RNVGRKAGNI--ADFCR--RWG-GAYDYMVVLDADSLMSGDTLVRLVRLMEANPRAGLI 254 (691)
T ss_pred cCCCccHHHH--HHHHH--hcC-CCcCEEEEEcCCCCCCHHHHHHHHHHHhhCcCEEEE
Confidence 3322211111 11221 111 579999999999999886 34432 2 2345555
No 91
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=22.19 E-value=1.6e+02 Score=30.73 Aligned_cols=19 Identities=32% Similarity=0.651 Sum_probs=14.6
Q ss_pred cceEEEEecCCCCCCCcch
Q 006648 195 RINLIAVKLPCRNEGNWSK 213 (637)
Q Consensus 195 ~~~~~~~~~pc~~~~~~~r 213 (637)
.+|+|++-.||.+.+-+.|
T Consensus 140 ~fD~Vl~D~Pcsg~G~~~~ 158 (264)
T TIGR00446 140 KFDAILLDAPCSGEGVIRK 158 (264)
T ss_pred CCCEEEEcCCCCCCccccc
Confidence 4899999999987654433
Done!