Your job contains 1 sequence.
>006652
MEGRKTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLK
CVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS
SITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQK
PTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG
SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD
IRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA
VSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLG
RTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLL
LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKI
LRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC
CLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006652
(637 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2056896 - symbol:AT2G03270 species:3702 "Arabi... 2517 1.4e-261 1
UNIPROTKB|Q60560 - symbol:IGHMBP2 "DNA-binding protein SM... 1246 6.8e-127 1
RGD|68325 - symbol:Ighmbp2 "immunoglobulin mu binding pro... 1233 1.6e-125 1
UNIPROTKB|Q9EQN5 - symbol:Ighmbp2 "DNA-binding protein SM... 1233 1.6e-125 1
MGI|MGI:99954 - symbol:Ighmbp2 "immunoglobulin mu binding... 1226 8.9e-125 1
UNIPROTKB|P38935 - symbol:IGHMBP2 "DNA-binding protein SM... 1212 2.7e-123 1
UNIPROTKB|F1MHU8 - symbol:IGHMBP2 "Uncharacterized protei... 1202 3.1e-122 1
UNIPROTKB|E2R760 - symbol:IGHMBP2 "Uncharacterized protei... 1198 8.3e-122 1
UNIPROTKB|E2R8W1 - symbol:IGHMBP2 "Uncharacterized protei... 1198 8.3e-122 1
UNIPROTKB|E1BY42 - symbol:E1BY42 "Uncharacterized protein... 1189 7.4e-121 1
UNIPROTKB|F1RY71 - symbol:IGHMBP2 "Uncharacterized protei... 1174 2.9e-119 1
DICTYBASE|DDB_G0271732 - symbol:DDB_G0271732 "AN1-type zi... 956 6.5e-116 3
POMBASE|SPCC737.07c - symbol:SPCC737.07c "DNA polymerase ... 925 7.0e-93 1
SGD|S000001500 - symbol:HCS1 "Hexameric DNA polymerase al... 428 2.8e-70 3
TAIR|locus:2162858 - symbol:AT5G35970 species:3702 "Arabi... 434 7.8e-68 3
CGD|CAL0006154 - symbol:orf19.6199 species:5476 "Candida ... 342 1.5e-55 2
UNIPROTKB|Q5AAW1 - symbol:HCS1 "Putative uncharacterized ... 342 1.5e-55 2
TAIR|locus:2171007 - symbol:LBA1 "LOW-LEVEL BETA-AMYLASE ... 443 2.0e-39 1
DICTYBASE|DDB_G0288923 - symbol:upf1 "regulator of nonsen... 443 2.2e-39 1
CGD|CAL0003666 - symbol:NAM7 species:5476 "Candida albica... 439 4.8e-39 1
UNIPROTKB|Q5A507 - symbol:NAM7 "Putative uncharacterized ... 439 4.8e-39 1
UNIPROTKB|G4ND47 - symbol:MGG_00976 "Regulator-nonsense t... 438 9.4e-39 2
ZFIN|ZDB-GENE-040426-2836 - symbol:upf1 "upf1 regulator o... 436 1.5e-38 1
UNIPROTKB|E1C0J4 - symbol:UPF1 "Uncharacterized protein" ... 434 2.9e-38 1
MGI|MGI:107995 - symbol:Upf1 "UPF1 regulator of nonsense ... 432 5.4e-38 1
UNIPROTKB|E1BEK9 - symbol:UPF1 "Uncharacterized protein" ... 432 5.4e-38 1
UNIPROTKB|E1C0J3 - symbol:UPF1 "Uncharacterized protein" ... 432 5.4e-38 1
UNIPROTKB|Q92900 - symbol:UPF1 "Regulator of nonsense tra... 432 5.4e-38 1
UNIPROTKB|E2RL81 - symbol:UPF1 "Uncharacterized protein" ... 432 5.4e-38 1
ASPGD|ASPL0000056713 - symbol:AN0646 species:162425 "Emer... 430 8.9e-38 1
SGD|S000004685 - symbol:NAM7 "ATP-dependent RNA helicase ... 431 1.0e-37 2
POMBASE|SPAC6G9.10c - symbol:sen1 "ATP-dependent 5' to 3'... 429 2.2e-37 3
FB|FBgn0030354 - symbol:Upf1 "Upf1" species:7227 "Drosoph... 419 2.4e-36 1
CGD|CAL0003335 - symbol:SEN1 species:5476 "Candida albica... 423 1.3e-35 3
TAIR|locus:2130384 - symbol:MAA3 "MAGATAMA 3" species:370... 381 5.2e-35 3
POMBASE|SPAC16C9.06c - symbol:upf1 "ATP-dependent RNA hel... 390 3.5e-33 1
POMBASE|SPBC29A10.10c - symbol:SPBC29A10.10c "tRNA-splici... 393 5.7e-33 1
UNIPROTKB|Q5ZKG3 - symbol:DNA2 "DNA replication ATP-depen... 374 5.7e-32 2
DICTYBASE|DDB_G0268924 - symbol:DDB_G0268924 "Helicase SE... 372 7.0e-32 3
SGD|S000001207 - symbol:DNA2 "Tripartite DNA replication ... 242 1.5e-31 3
UNIPROTKB|F1PYQ4 - symbol:DNA2 "Uncharacterized protein" ... 345 1.6e-31 2
UNIPROTKB|G4MK85 - symbol:MGG_02491 "DNA replication ATP-... 204 3.1e-31 3
WB|WBGene00004880 - symbol:smg-2 species:6239 "Caenorhabd... 372 5.1e-31 1
DICTYBASE|DDB_G0289529 - symbol:DDB_G0289529 species:4468... 371 6.4e-31 3
UNIPROTKB|J9NRI6 - symbol:DNA2 "Uncharacterized protein" ... 198 1.0e-30 3
UNIPROTKB|G4NIZ8 - symbol:MGG_02784 "DNA-binding protein ... 379 1.3e-30 3
UNIPROTKB|Q8QHA5 - symbol:dna2 "DNA replication ATP-depen... 202 2.0e-30 3
DICTYBASE|DDB_G0268914 - symbol:DDB_G0268914 species:4468... 344 5.7e-30 2
ZFIN|ZDB-GENE-070402-1 - symbol:setx "senataxin" species:... 367 6.6e-30 2
UNIPROTKB|F6UZP1 - symbol:DNA2 "Uncharacterized protein" ... 198 7.9e-30 3
UNIPROTKB|E2QSH2 - symbol:E2QSH2 "Uncharacterized protein... 198 8.5e-30 3
RGD|2322000 - symbol:LOC100363957 "hypothetical protein L... 358 1.4e-29 1
ZFIN|ZDB-GENE-090313-71 - symbol:dna2 "DNA replication he... 212 1.6e-29 3
DICTYBASE|DDB_G0268662 - symbol:DDB_G0268662 "DNA2/NAM7 h... 360 2.0e-29 3
RGD|1306791 - symbol:Dna2 "DNA replication helicase 2 hom... 198 3.8e-29 3
UNIPROTKB|E1BQD2 - symbol:C4H4orf21 "Uncharacterized prot... 354 3.9e-29 1
GENEDB_PFALCIPARUM|MAL7P1.12 - symbol:MAL7P1.12 "erythroc... 356 4.0e-29 3
UNIPROTKB|Q8IC35 - symbol:MAL7P1.12 "Erythrocyte membrane... 356 4.0e-29 3
DICTYBASE|DDB_G0285243 - symbol:DDB_G0285243 "putative sp... 369 8.0e-29 2
DICTYBASE|DDB_G0268660 - symbol:DDB_G0268660 "DNA2/NAM7 h... 351 1.3e-28 3
UNIPROTKB|E1BMP7 - symbol:DNA2 "DNA replication ATP-depen... 194 1.7e-28 3
UNIPROTKB|Q6ZU11 - symbol:Q6ZU11 "Uncharacterized protein... 348 1.9e-28 1
UNIPROTKB|K7DXW3 - symbol:DNA2 "DNA replication nuclease ... 194 2.3e-28 3
TAIR|locus:2018536 - symbol:AT1G65780 species:3702 "Arabi... 347 2.7e-28 2
MGI|MGI:2443732 - symbol:Dna2 "DNA replication helicase 2... 192 2.9e-28 3
TAIR|locus:2059088 - symbol:AT2G19120 "AT2G19120" species... 353 3.5e-28 3
DICTYBASE|DDB_G0274399 - symbol:DDB_G0274399 "DNA2/NAM7 h... 352 3.8e-28 3
UNIPROTKB|E1BG37 - symbol:E1BG37 "Uncharacterized protein... 345 4.1e-28 1
TAIR|locus:2166173 - symbol:AT5G37150 species:3702 "Arabi... 341 5.1e-28 2
UNIPROTKB|F1PCI1 - symbol:C4orf21 "Uncharacterized protei... 344 6.3e-28 1
TAIR|locus:2173033 - symbol:AT5G52090 species:3702 "Arabi... 336 6.5e-28 2
SGD|S000004422 - symbol:SEN1 "Presumed helicase and subun... 344 1.2e-27 2
TAIR|locus:2126480 - symbol:AT4G30100 species:3702 "Arabi... 353 2.2e-27 3
WB|WBGene00016566 - symbol:eri-7 species:6239 "Caenorhabd... 209 7.5e-27 3
UNIPROTKB|P51530 - symbol:DNA2 "DNA replication ATP-depen... 188 8.6e-27 3
TAIR|locus:2135472 - symbol:AT4G05540 species:3702 "Arabi... 334 1.1e-26 2
UNIPROTKB|F1PHA4 - symbol:SETX "Uncharacterized protein" ... 342 1.1e-26 2
UNIPROTKB|J3KPX5 - symbol:DNA2 "DNA replication ATP-depen... 188 1.2e-26 3
UNIPROTKB|H0Y455 - symbol:DNA2 "DNA replication ATP-depen... 188 1.4e-26 2
UNIPROTKB|G5EA02 - symbol:C4orf21 "Uncharacterized protei... 348 1.7e-26 2
UNIPROTKB|F1S0U6 - symbol:SETX "Uncharacterized protein" ... 340 2.2e-26 2
UNIPROTKB|E1C4T7 - symbol:Gga.18015 "Uncharacterized prot... 342 2.9e-26 2
POMBASE|SPBC16D10.04c - symbol:dna2 "DNA replication endo... 205 3.0e-26 3
FB|FBgn0030170 - symbol:CG2990 species:7227 "Drosophila m... 192 3.0e-26 3
UNIPROTKB|Q7Z333 - symbol:SETX "Probable helicase senatax... 332 6.7e-26 2
UNIPROTKB|Q4S102 - symbol:GSTENG00025786001 "Chromosome 5... 204 6.7e-26 3
ZFIN|ZDB-GENE-070424-144 - symbol:si:ch211-183d5.1 "si:ch... 317 9.0e-26 1
CGD|CAL0002159 - symbol:DNA2 species:5476 "Candida albica... 214 1.2e-25 3
TAIR|locus:2166163 - symbol:AT5G37140 species:3702 "Arabi... 322 2.8e-25 2
TAIR|locus:2152627 - symbol:AT5G37030 species:3702 "Arabi... 319 3.0e-25 2
UNIPROTKB|F1NWZ8 - symbol:DNA2 "DNA replication ATP-depen... 220 7.6e-25 3
SGD|S000000978 - symbol:ECM32 "DNA dependent ATPase/DNA h... 209 8.9e-25 2
UNIPROTKB|E1BAS6 - symbol:SETX "Uncharacterized protein" ... 322 3.1e-24 3
WB|WBGene00001016 - symbol:dna-2 species:6239 "Caenorhabd... 191 9.2e-24 2
TAIR|locus:2018561 - symbol:AT1G65810 species:3702 "Arabi... 297 1.3e-23 2
UNIPROTKB|D4AEB3 - symbol:Setx "Protein Setx" species:101... 317 4.4e-23 2
CGD|CAL0001700 - symbol:orf19.702 species:5476 "Candida a... 197 5.9e-23 2
TAIR|locus:2166183 - symbol:AT5G37160 species:3702 "Arabi... 301 7.1e-23 2
MGI|MGI:2443480 - symbol:Setx "senataxin" species:10090 "... 319 7.9e-23 4
TAIR|locus:2200996 - symbol:SDE3 "SILENCING DEFECTIVE" sp... 262 5.7e-22 2
WARNING: Descriptions of 72 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2056896 [details] [associations]
symbol:AT2G03270 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AC005313 EMBL:AC006284 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 UniGene:At.10455 UniGene:At.71239 EMBL:AY045820
EMBL:AY091361 IPI:IPI00521943 PIR:T02699 RefSeq:NP_565299.1
ProteinModelPortal:O81047 SMR:O81047 STRING:O81047 PaxDb:O81047
PRIDE:O81047 EnsemblPlants:AT2G03270.1 GeneID:814856
KEGG:ath:AT2G03270 TAIR:At2g03270 InParanoid:O81047 OMA:GHPSRVS
PhylomeDB:O81047 ProtClustDB:CLSN2687941 ArrayExpress:O81047
Genevestigator:O81047 Uniprot:O81047
Length = 639
Score = 2517 (891.1 bits), Expect = 1.4e-261, P = 1.4e-261
Identities = 501/635 (78%), Positives = 556/635 (87%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
+SL+ FVS MAPLID+EKEAEIS S+TSGASRN++TAQKKG+TILNLKCVD QTGLMGK+
Sbjct: 5 MSLEAFVSTMAPLIDMEKEAEISMSLTSGASRNIETAQKKGTTILNLKCVDVQTGLMGKS 64
Query: 73 LLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEE 132
L+EFQS KGDVLPAHKFG HDVVVLK NK+DLGS L QGVVYRLKDSSITV FD++PEE
Sbjct: 65 LIEFQSNKGDVLPAHKFGNHDVVVLKLNKSDLGSSPLAQGVVYRLKDSSITVVFDEVPEE 124
Query: 133 GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDI-AFK 191
GLN+ LRLEKLANEVTYRRMKD LIQLSKGV GPA+ L+PVLFGE++P+V KKD+ +F
Sbjct: 125 GLNTSLRLEKLANEVTYRRMKDTLIQLSKGVLRGPASDLVPVLFGERQPSVSKKDVKSFT 184
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGSKILACAASNI 251
PFN NLD SQKDAI+KALSSK+VF+LH VVEI+LQEVKRGSKILACAASNI
Sbjct: 185 PFNKNLDQSQKDAITKALSSKDVFLLHGPPGTGKTTTVVEIVLQEVKRGSKILACAASNI 244
Query: 252 AVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGK 311
AVDNI GHPARLLPQVL+SALDAQVL+GDNS LA+DIRKEMKALNGK
Sbjct: 245 AVDNIVERLVPHKVKLVRVGHPARLLPQVLDSALDAQVLKGDNSGLANDIRKEMKALNGK 304
Query: 312 LLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
LLK KDKNTRR IQKELRTL KEERKRQQLAV+DVIKNADV+LTTLTGA++RKLDN +FD
Sbjct: 305 LLKAKDKNTRRLIQKELRTLGKEERKRQQLAVSDVIKNADVILTTLTGALTRKLDNRTFD 364
Query: 372 LVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
LVIIDE AQALE+ACWIALLKGSRCILAGDHLQLPPT+QS EAE+KGLGRTLFERLADLY
Sbjct: 365 LVIIDEGAQALEVACWIALLKGSRCILAGDHLQLPPTIQSAEAERKGLGRTLFERLADLY 424
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLL 481
GDE+ SMLTVQYRMHE IMNWSSK+LY++KI AH S V ++SSTE TLLL
Sbjct: 425 GDEIKSMLTVQYRMHELIMNWSSKELYDNKITAHSSVASHMLFDLENVTKSSSTEATLLL 484
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL 541
+D AGCDMEEKKDEE+ST NEGEAEVAMAHAKRL++SGV SDIGIITPYAAQV+LL+IL
Sbjct: 485 VDTAGCDMEEKKDEEESTYNEGEAEVAMAHAKRLMESGVQPSDIGIITPYAAQVMLLRIL 544
Query: 542 RSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
R K++KLK+ME+STVDGFQGREKEAIIISMVRSNSKKEVGFL D+RRMNVAVTR+RRQCC
Sbjct: 545 RGKEEKLKDMEISTVDGFQGREKEAIIISMVRSNSKKEVGFLKDQRRMNVAVTRSRRQCC 604
Query: 602 LVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLN 636
+VCDTETVSSD FLKR+IEYFEEH EYLS SEY N
Sbjct: 605 IVCDTETVSSDAFLKRMIEYFEEHGEYLSASEYTN 639
>UNIPROTKB|Q60560 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:10036
"Mesocricetus auratus" [GO:0000049 "tRNA binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=ISS] [GO:0043022 "ribosome binding"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0043621 "protein self-association"
evidence=ISS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0030424 GO:GO:0008270 GO:GO:0006351
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
PANTHER:PTHR10887:SF23 EMBL:L15625 PIR:T48845
ProteinModelPortal:Q60560 SMR:Q60560 Uniprot:Q60560
Length = 989
Score = 1246 (443.7 bits), Expect = 6.8e-127, P = 6.8e-127
Identities = 282/647 (43%), Positives = 392/647 (60%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
+++ FV+ L++LE++AE+ + +L Q +G +L L+ TGL G+ L
Sbjct: 5 TVESFVAQQLELLELERDAEVEERRSWQEHSSLKELQSRGVCLLKLQVSSQCTGLYGQRL 64
Query: 74 LEFQSTK-GDV--LPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIP 130
+ F+ K G V LP++ F + D+V L S L GV+ R+ S+TVAFD+
Sbjct: 65 VTFEPRKLGPVVVLPSNSFTSGDIVGLYDANE---SSQLATGVLTRITQKSVTVAFDESH 121
Query: 131 EEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
+ LN + RL KLAN+VTY+R+K AL+ L K +GPA+ LI VL G P+ +
Sbjct: 122 DFQLNLDRENTYRLLKLANDVTYKRLKKALMTLKK-YHSGPASSLIDVLLGGSSPSPTTE 180
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGSKILAC 246
F +N+ LD SQK+A+S AL+ K V ++H VVEIILQ VK+G KIL C
Sbjct: 181 IPPFTFYNTALDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQGLKILCC 240
Query: 247 AASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
A SN+AVDN+ GHPARLL + +LDA + R DN+ + +DIRK++
Sbjct: 241 APSNVAVDNLVERLALCKKRILRLGHPARLLESAQQHSLDAVLARSDNAQIVADIRKDID 300
Query: 307 ALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS---- 362
+ GK KT+DK + + E++ L KE ++R++ A+ + ADVVL T TGA S
Sbjct: 301 QVFGKNKKTQDKREKSNFRNEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASSDGPL 360
Query: 363 RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRT 422
+ L FD+V++DE AQALE +CWI LLK +CILAGDH QLPPT S +A GL R+
Sbjct: 361 KLLPENHFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTISHKAALAGLSRS 420
Query: 423 LFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRT 472
L ERL + +G MLTVQYRMH+ I W+S+ +Y+ ++ AHPS GV T
Sbjct: 421 LMERLVEKHGAGAVRMLTVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGVADT 480
Query: 473 SSTEPTLLLIDIAGCDMEEKKDEEDSTM--NEGEAEVAMAHAKRLIQSGVHASDIGIITP 530
T LLLID AGC + E DEEDS N GE + H + L+ +GVHA DI +I P
Sbjct: 481 EETSVPLLLIDTAGCGLLEL-DEEDSQSKGNPGEVRLVTLHIQALVDAGVHAGDIAVIAP 539
Query: 531 YAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
Y QV LL+ +S +K +E+ +VDGFQGREKEA+I++ VRSN K EVGFL++ RR+N
Sbjct: 540 YNLQVDLLR--QSLSNKHPELEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRIN 597
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
VAVTRARR ++CD+ TV++ FLK L++YF EH E + EYL++
Sbjct: 598 VAVTRARRHVAVICDSRTVNNHAFLKTLVDYFTEHGEVRTAFEYLDD 644
>RGD|68325 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2" species:10116
"Rattus norvegicus" [GO:0000049 "tRNA binding" evidence=IEA;ISO;ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IEA;ISO;IDA] [GO:0003723 "RNA binding" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISO;ISS] [GO:0005634
"nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO;ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008134 "transcription factor binding"
evidence=IEA;ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021522 "spinal cord motor neuron differentiation" evidence=ISO]
[GO:0030424 "axon" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA;ISO] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=IEA;ISO;ISS] [GO:0032797 "SMN complex"
evidence=IEA;ISO] [GO:0043022 "ribosome binding"
evidence=IEA;ISO;ISS] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0043621 "protein self-association"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=IEA;ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 RGD:68325 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0030424 GO:GO:0001078 GO:GO:0008270 GO:GO:0051260
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OrthoDB:EOG4GHZNJ
PANTHER:PTHR10887:SF23 EMBL:AF199411 IPI:IPI00190206
RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 1233 (439.1 bits), Expect = 1.6e-125, P = 1.6e-125
Identities = 275/649 (42%), Positives = 394/649 (60%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + +L Q +G +L L+ +TGL G
Sbjct: 2 ASYTVESFVAQQLQLLELERDAEVEERRSWQEHSSLKELQSRGVCLLKLQVSGQRTGLYG 61
Query: 71 KTLLEFQSTK-GD--VLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ K G VLP++ F + D+V L S L GV+ R+ S+ VAFD
Sbjct: 62 QRLVTFEPRKFGPAVVLPSNSFTSGDIVGLYDTNE---SSQLATGVLTRITQKSVIVAFD 118
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + LN + RL KLAN+VTY+R+K AL+ L K +GPA+ LI VL G P+
Sbjct: 119 ESHDFQLNLDRENTYRLLKLANDVTYKRLKKALLTLKK-YHSGPASSLIDVLLGGSTPSP 177
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGSKI 243
+ +N+ LD SQK+A+S AL+ K V ++H VVEIILQ VK+G K+
Sbjct: 178 ATEIPPLTFYNTTLDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQGLKV 237
Query: 244 LACAASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+ GHPARLL V + +LDA + R DN+ + +DIR+
Sbjct: 238 LCCAPSNIAVDNLVERLALCKKQILRLGHPARLLESVQQHSLDAVLARSDNAQIVADIRR 297
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + GK KT+DK + + E++ L KE ++R++ A+ + ADVVL T TGA +
Sbjct: 298 DIDQVFGKNKKTQDKREKSNFRNEIKLLRKELKEREEAAIVQSLSAADVVLATNTGASTD 357
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L FD+V++DE AQALE +CWI LLK +CILAGDH QLPPT S +A GL
Sbjct: 358 GPLKLLPEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHKQLPPTTVSHKAALAGL 417
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
R+L ERLA+ +G V ML VQYRMH+ I W+S+ +Y+ ++ AHPS GV
Sbjct: 418 SRSLMERLAEKHGAAVVRMLAVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGV 477
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDEEDSTM-NEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLLID AGC + E ++E+ + N GE + H + L+ +GV A DI +I
Sbjct: 478 ADTEETSVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVI 537
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
PY QV LL+ +S +K +E+ +VDGFQGREKEA+I++ VRSN K EVGFL++ RR
Sbjct: 538 APYNLQVDLLR--QSLSNKHPELEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRR 595
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L++YF EH E + EYL++
Sbjct: 596 INVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEVRTAFEYLDD 644
>UNIPROTKB|Q9EQN5 [details] [associations]
symbol:Ighmbp2 "DNA-binding protein SMUBP-2" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 RGD:68325 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0030424 GO:GO:0001078
GO:GO:0008270 GO:GO:0051260 GO:GO:0043621 GO:GO:0043022
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 GO:GO:0032797 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:AF199411
IPI:IPI00190206 RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 1233 (439.1 bits), Expect = 1.6e-125, P = 1.6e-125
Identities = 275/649 (42%), Positives = 394/649 (60%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + +L Q +G +L L+ +TGL G
Sbjct: 2 ASYTVESFVAQQLQLLELERDAEVEERRSWQEHSSLKELQSRGVCLLKLQVSGQRTGLYG 61
Query: 71 KTLLEFQSTK-GD--VLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ K G VLP++ F + D+V L S L GV+ R+ S+ VAFD
Sbjct: 62 QRLVTFEPRKFGPAVVLPSNSFTSGDIVGLYDTNE---SSQLATGVLTRITQKSVIVAFD 118
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + LN + RL KLAN+VTY+R+K AL+ L K +GPA+ LI VL G P+
Sbjct: 119 ESHDFQLNLDRENTYRLLKLANDVTYKRLKKALLTLKK-YHSGPASSLIDVLLGGSTPSP 177
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGSKI 243
+ +N+ LD SQK+A+S AL+ K V ++H VVEIILQ VK+G K+
Sbjct: 178 ATEIPPLTFYNTTLDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQGLKV 237
Query: 244 LACAASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+ GHPARLL V + +LDA + R DN+ + +DIR+
Sbjct: 238 LCCAPSNIAVDNLVERLALCKKQILRLGHPARLLESVQQHSLDAVLARSDNAQIVADIRR 297
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + GK KT+DK + + E++ L KE ++R++ A+ + ADVVL T TGA +
Sbjct: 298 DIDQVFGKNKKTQDKREKSNFRNEIKLLRKELKEREEAAIVQSLSAADVVLATNTGASTD 357
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L FD+V++DE AQALE +CWI LLK +CILAGDH QLPPT S +A GL
Sbjct: 358 GPLKLLPEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHKQLPPTTVSHKAALAGL 417
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
R+L ERLA+ +G V ML VQYRMH+ I W+S+ +Y+ ++ AHPS GV
Sbjct: 418 SRSLMERLAEKHGAAVVRMLAVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGV 477
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDEEDSTM-NEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLLID AGC + E ++E+ + N GE + H + L+ +GV A DI +I
Sbjct: 478 ADTEETSVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVI 537
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
PY QV LL+ +S +K +E+ +VDGFQGREKEA+I++ VRSN K EVGFL++ RR
Sbjct: 538 APYNLQVDLLR--QSLSNKHPELEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRR 595
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L++YF EH E + EYL++
Sbjct: 596 INVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEVRTAFEYLDD 644
>MGI|MGI:99954 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2"
species:10090 "Mus musculus" [GO:0000049 "tRNA binding"
evidence=ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006412 "translation"
evidence=NAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IMP]
[GO:0030424 "axon" evidence=IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032575 "ATP-dependent 5'-3' RNA helicase activity"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043022 "ribosome binding" evidence=ISO;IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154
SMART:SM00382 SMART:SM00393 MGI:MGI:99954 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0006412 GO:GO:0030424 GO:GO:0043025
GO:GO:0008270 GO:GO:0051260 GO:GO:0006351 GO:GO:0043621
GO:GO:0043022 GO:GO:0030426 GO:GO:0021522 GO:GO:0030529
GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:L10075
IPI:IPI00113033 PIR:S35633 UniGene:Mm.3179
ProteinModelPortal:P40694 SMR:P40694 IntAct:P40694 STRING:P40694
PhosphoSite:P40694 PaxDb:P40694 PRIDE:P40694 UCSC:uc008fwa.1
InParanoid:P40694 CleanEx:MM_IGHMBP2 Genevestigator:P40694
GermOnline:ENSMUSG00000024831 Uniprot:P40694
Length = 993
Score = 1226 (436.6 bits), Expect = 8.9e-125, P = 8.9e-125
Identities = 273/646 (42%), Positives = 392/646 (60%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
+++ FV+ L++LE++AE+ + +L Q +G +L L+ +TGL G+ L
Sbjct: 5 TVESFVAQQLQLLELERDAEVEERRSWQEHSSLRELQSRGVCLLKLQVSSQRTGLYGQRL 64
Query: 74 LEFQSTK-GD--VLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIP 130
+ F+ K G VLP++ F + D+V L + L GV+ R+ S+TVAFD+
Sbjct: 65 VTFEPRKFGPAVVLPSNSFTSGDIVGLYDTNEN---SQLATGVLTRITQKSVTVAFDESH 121
Query: 131 EEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
+ LN + RL KLAN+VTY+R+K AL+ L K +GPA+ LI +L G P+ +
Sbjct: 122 DLQLNLDRENTYRLLKLANDVTYKRLKKALMTLKK-YHSGPASSLIDILLGSSTPSPAME 180
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGSKILAC 246
+N+ LD SQK+A+S AL+ K + ++H VVEIILQ VK+G K+L C
Sbjct: 181 IPPLSFYNTTLDLSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCC 240
Query: 247 AASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
A SNIAVDN+ GHPARLL V +LDA + R DN+ + +DIR+++
Sbjct: 241 APSNIAVDNLVERLALCKKRILRLGHPARLLESVQHHSLDAVLARSDNAQIVADIRRDID 300
Query: 307 ALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS---- 362
+ GK KT+DK + + E++ L KE ++R++ A+ + ADVVL T TGA S
Sbjct: 301 QVFGKNKKTQDKREKGNFRSEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASSDGPL 360
Query: 363 RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRT 422
+ L FD+V++DE AQALE +CWI LLK +CILAGDH QLPPT S A GL R+
Sbjct: 361 KLLPEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTVSHRAALAGLSRS 420
Query: 423 LFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRT 472
L ERLA+ +G V MLTVQYRMH+ IM W+S+ +Y+ + +HPS GV T
Sbjct: 421 LMERLAEKHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQFTSHPSVAGHLLKDLPGVTDT 480
Query: 473 SSTEPTLLLIDIAGCDMEEKKDEEDSTM-NEGEAEVAMAHAKRLIQSGVHASDIGIITPY 531
T LLLID AGC + E ++E+ + N GE + H + L+ +GV A DI +I PY
Sbjct: 481 EETRVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVIAPY 540
Query: 532 AAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNV 591
QV LL+ +S +K +E+ +VDGFQGREKEA++++ VRSN K EVGFL++ RR+NV
Sbjct: 541 NLQVDLLR--QSLSNKHPELEIKSVDGFQGREKEAVLLTFVRSNRKGEVGFLAEDRRINV 598
Query: 592 AVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
AVTRARR ++CD+ TV++ FL+ L++YF EH E + EYL++
Sbjct: 599 AVTRARRHVAVICDSHTVNNHAFLETLVDYFTEHGEVRTAFEYLDD 644
>UNIPROTKB|P38935 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0006412
"translation" evidence=NAS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000049 "tRNA binding" evidence=IDA] [GO:0032797
"SMN complex" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003723
"RNA binding" evidence=IDA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0030424 "axon" evidence=ISS] [GO:0030426 "growth
cone" evidence=ISS] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0003697
"single-stranded DNA binding" evidence=TAS] [GO:0006260 "DNA
replication" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006310 "DNA recombination" evidence=TAS] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0006412
GO:GO:0006260 GO:GO:0008219 GO:GO:0030424 GO:GO:0008270
GO:GO:0006281 GO:GO:0051260 GO:GO:0006351 GO:GO:0043022
GO:GO:0000122 GO:GO:0030426 GO:GO:0006310 GO:GO:0003697
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Orphanet:98920 EMBL:AP000808 Gene3D:4.10.1110.10 GO:GO:0032575
EMBL:L14754 EMBL:L24544 EMBL:BC025299 EMBL:M64979 IPI:IPI00009379
PIR:A47500 RefSeq:NP_002171.2 UniGene:Hs.503048 PDB:1MSZ PDB:2LRR
PDB:4B3F PDB:4B3G PDBsum:1MSZ PDBsum:2LRR PDBsum:4B3F PDBsum:4B3G
ProteinModelPortal:P38935 SMR:P38935 IntAct:P38935 STRING:P38935
PhosphoSite:P38935 DMDM:229462778 PaxDb:P38935 PRIDE:P38935
Ensembl:ENST00000255078 GeneID:3508 KEGG:hsa:3508 UCSC:uc001ook.1
CTD:3508 GeneCards:GC11P068671 H-InvDB:HIX0009884
H-InvDB:HIX0171377 HGNC:HGNC:5542 MIM:600502 MIM:604320
neXtProt:NX_P38935 PharmGKB:PA29731 HOVERGEN:HBG077019
InParanoid:P38935 OMA:HARQRIS OrthoDB:EOG4GHZNJ PhylomeDB:P38935
EvolutionaryTrace:P38935 GenomeRNAi:3508 NextBio:13764
ArrayExpress:P38935 Bgee:P38935 CleanEx:HS_IGHMBP2
Genevestigator:P38935 GermOnline:ENSG00000132740
PANTHER:PTHR10887:SF23 Uniprot:P38935
Length = 993
Score = 1212 (431.7 bits), Expect = 2.7e-123, P = 2.7e-123
Identities = 275/649 (42%), Positives = 398/649 (61%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK-GDV--LPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + G LP++ F + D+V L + A+ GS L G++ R+ S+TVAFD
Sbjct: 62 RLLVTFEPRRYGSAAALPSNSFTSGDIVGLY-DAANEGSQ-LATGILTRVTQKSVTVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ + RL KLAN+VTYRR+K ALI L K +GPA+ LI VLFG P+
Sbjct: 120 ESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKK-YHSGPASSLIEVLFGRSAPSP 178
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGSKI 243
+ FN+ LD SQK+A+ ALS K + ++H VVEIILQ VK+G K+
Sbjct: 179 ASEIHPLTFFNTCLDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 238
Query: 244 LACAASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+ GHPARLL + + +LDA + R D++ + +DIRK
Sbjct: 239 LCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRK 298
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + K KT+DK + + E++ L KE ++R++ A+ + + +A+VVL T TGA +
Sbjct: 299 DIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASAD 358
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT S +A GL
Sbjct: 359 GPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGL 418
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ YG V LTVQYRMH+ IM W+S +Y ++ AH S GV
Sbjct: 419 SLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGV 478
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A DI ++
Sbjct: 479 AATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVV 538
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
+PY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 539 SPYNLQVDLLR--QSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 596
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 597 INVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 645
>UNIPROTKB|F1MHU8 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0051260 GO:GO:0043022
GO:GO:0000049 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:DAAA02063651 IPI:IPI01017505
RefSeq:XP_003584325.1 RefSeq:XP_003588118.1 UniGene:Bt.103594
Ensembl:ENSBTAT00000044489 GeneID:618606 KEGG:bta:618606
Uniprot:F1MHU8
Length = 981
Score = 1202 (428.2 bits), Expect = 3.1e-122, P = 3.1e-122
Identities = 271/649 (41%), Positives = 391/649 (60%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ ++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASTPVESFVTKQLELLELERDAEVEERRSWQENVSLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ + + VLP++ F + D+V L L + G++ R+ ++TVAFD
Sbjct: 62 RLLITLEPRRCVSAAVLPSNSFTSGDIVGLYDESGQLAT-----GILTRITQKAVTVAFD 116
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ RL KLAN+VTY+R+K ALI L K GPA+ LI VLFG P+
Sbjct: 117 ESHDSQLSLDQEHSYRLLKLANDVTYKRLKKALISLKKH-HAGPASSLIEVLFGASDPSP 175
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGSKI 243
+ N LD SQ++A+ ALS K + ++H VVEIILQ VKRGSK+
Sbjct: 176 PSEMPPLTFCNPALDASQQEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKRGSKV 235
Query: 244 LACAASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SN+AVDN+ GHPARLL + + +LDA + R D++ + +DIR+
Sbjct: 236 LCCAPSNVAVDNLVERLAQWKQRILRLGHPARLLDSIQQHSLDAVLARSDSARIVADIRR 295
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ K KT+DK + + E++ L KE + R++ A+ + + A VVL T TGA +
Sbjct: 296 DIDQAWAKNRKTQDKREKSNFRDEIKLLRKELKDREEAAMLESLAAASVVLATNTGASAD 355
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L ++ FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT+ S +A GL
Sbjct: 356 GPLKLLPDSHFDMVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTIVSHKAALAGL 415
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ +G MLTVQYRMH+ I W+S+ LY+ ++ AHPS GV
Sbjct: 416 SLSLMERLAERHGAGALRMLTVQYRMHQAIARWASEALYHGQLTAHPSVAGHLLRDLPGV 475
Query: 470 KRTSSTEPTLLLIDIAGCDMEE-KKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC + E ++D+E S N GE + H + L+ +GV A+DI +I
Sbjct: 476 AATEETGVPLLLVDTAGCGLLELEEDDEQSKGNPGEVRLVGLHVQALVDAGVRAADIAVI 535
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
TPY QV LL+ +S +L +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 536 TPYNLQVDLLR--QSLAHRLPELEIRSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 593
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR +VCD+ TVS+ FLK L++Y EH E + EYL++
Sbjct: 594 INVAVTRARRHVAVVCDSRTVSNHAFLKTLVDYLTEHGEVRTAFEYLDD 642
>UNIPROTKB|E2R760 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0032797 "SMN complex" evidence=IEA] [GO:0032575
"ATP-dependent 5'-3' RNA helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575
PANTHER:PTHR10887:SF23 EMBL:AAEX03011604 Ensembl:ENSCAFT00000038980
NextBio:20858044 Uniprot:E2R760
Length = 992
Score = 1198 (426.8 bits), Expect = 8.3e-122, P = 8.3e-122
Identities = 273/651 (41%), Positives = 394/651 (60%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + + Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKHLDLLELERDAEVEERRSWQENISPKVLQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQS---TKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ + T VLP++ F + D+V L D G+ L G++ R+ S+TVAFD
Sbjct: 62 RLLVTLEPRRCTSAAVLPSNSFTSGDIVGLY----DEGNQ-LATGILTRITQRSVTVAFD 116
Query: 128 ---DIP---EEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKP 181
D + RL KLAN++TY+R+K ALI L K +GPA+ LI VLFG P
Sbjct: 117 ASHDFQLSLDRDRERAYRLLKLANDITYKRLKKALITLKK-YHSGPASSLIEVLFGGSAP 175
Query: 182 TVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGS 241
+ N++LD SQK+A+S ALS K + ++H VVEIILQ V++G
Sbjct: 176 SPASNTEPPLFCNTSLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVRQGL 235
Query: 242 KILACAASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDI 301
K+L CA SNIAVDN+ GHPARLL + + +LDA + R DN+ + +DI
Sbjct: 236 KVLCCAPSNIAVDNLVERLARCKQKILRLGHPARLLESIQQHSLDAVLARSDNAQIVADI 295
Query: 302 RKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAV 361
RK++ +T+D+ + + E++ L KE ++R++ A+ + + +A VVL T TGA
Sbjct: 296 RKDIDQAFVNNRQTQDRREKSSVWNEVKLLRKELKEREEAAMLESLTSAAVVLATNTGAS 355
Query: 362 S----RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKK 417
S + L +T FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT S +A
Sbjct: 356 SDGPLKLLPDTHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALA 415
Query: 418 GLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS---------- 467
GL +L ERLA+ +G V LTVQYRMH+ IM W+S+ LY+ ++ AHPS
Sbjct: 416 GLSLSLMERLAEEHGARVVRTLTVQYRMHQAIMRWASEALYHGQLTAHPSVAGHLLRDLP 475
Query: 468 GVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTM-NEGEAEVAMAHAKRLIQSGVHASDIG 526
GV T T LLL+D AGC + E +D++D + N GE + H + L+ +GV ASDI
Sbjct: 476 GVAATEETGIPLLLVDTAGCGLFELEDDDDQSKGNPGEVRLVSLHIQALVDAGVQASDIA 535
Query: 527 IITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR 586
+ITPY QV LL+ +S + +E+ +VDGFQGREKEA+++S VRSN K EVGFL++
Sbjct: 536 VITPYNLQVDLLR--QSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAED 593
Query: 587 RRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
RR+NVAVTRARR +VCD+ TVS+ FLK L+++F EH E + EYL++
Sbjct: 594 RRINVAVTRARRHVAVVCDSRTVSNHAFLKTLVDHFTEHGEVRTAFEYLDD 644
>UNIPROTKB|E2R8W1 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
CTD:3508 OMA:HARQRIS PANTHER:PTHR10887:SF23 EMBL:AAEX03011604
RefSeq:XP_540807.2 Ensembl:ENSCAFT00000017093 GeneID:483686
KEGG:cfa:483686 Uniprot:E2R8W1
Length = 1010
Score = 1198 (426.8 bits), Expect = 8.3e-122, P = 8.3e-122
Identities = 273/651 (41%), Positives = 394/651 (60%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + + Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKHLDLLELERDAEVEERRSWQENISPKVLQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQS---TKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ + T VLP++ F + D+V L D G+ L G++ R+ S+TVAFD
Sbjct: 62 RLLVTLEPRRCTSAAVLPSNSFTSGDIVGLY----DEGNQ-LATGILTRITQRSVTVAFD 116
Query: 128 ---DIP---EEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKP 181
D + RL KLAN++TY+R+K ALI L K +GPA+ LI VLFG P
Sbjct: 117 ASHDFQLSLDRDRERAYRLLKLANDITYKRLKKALITLKK-YHSGPASSLIEVLFGGSAP 175
Query: 182 TVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGS 241
+ N++LD SQK+A+S ALS K + ++H VVEIILQ V++G
Sbjct: 176 SPASNTEPPLFCNTSLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVRQGL 235
Query: 242 KILACAASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDI 301
K+L CA SNIAVDN+ GHPARLL + + +LDA + R DN+ + +DI
Sbjct: 236 KVLCCAPSNIAVDNLVERLARCKQKILRLGHPARLLESIQQHSLDAVLARSDNAQIVADI 295
Query: 302 RKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAV 361
RK++ +T+D+ + + E++ L KE ++R++ A+ + + +A VVL T TGA
Sbjct: 296 RKDIDQAFVNNRQTQDRREKSSVWNEVKLLRKELKEREEAAMLESLTSAAVVLATNTGAS 355
Query: 362 S----RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKK 417
S + L +T FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT S +A
Sbjct: 356 SDGPLKLLPDTHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALA 415
Query: 418 GLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS---------- 467
GL +L ERLA+ +G V LTVQYRMH+ IM W+S+ LY+ ++ AHPS
Sbjct: 416 GLSLSLMERLAEEHGARVVRTLTVQYRMHQAIMRWASEALYHGQLTAHPSVAGHLLRDLP 475
Query: 468 GVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTM-NEGEAEVAMAHAKRLIQSGVHASDIG 526
GV T T LLL+D AGC + E +D++D + N GE + H + L+ +GV ASDI
Sbjct: 476 GVAATEETGIPLLLVDTAGCGLFELEDDDDQSKGNPGEVRLVSLHIQALVDAGVQASDIA 535
Query: 527 IITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR 586
+ITPY QV LL+ +S + +E+ +VDGFQGREKEA+++S VRSN K EVGFL++
Sbjct: 536 VITPYNLQVDLLR--QSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAED 593
Query: 587 RRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
RR+NVAVTRARR +VCD+ TVS+ FLK L+++F EH E + EYL++
Sbjct: 594 RRINVAVTRARRHVAVVCDSRTVSNHAFLKTLVDHFTEHGEVRTAFEYLDD 644
>UNIPROTKB|E1BY42 [details] [associations]
symbol:E1BY42 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IEA] [GO:0032797 "SMN complex"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51061 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:AADN02040052 EMBL:AADN02040053
IPI:IPI00595444 Ensembl:ENSGALT00000006901 Uniprot:E1BY42
Length = 976
Score = 1189 (423.6 bits), Expect = 7.4e-121, P = 7.4e-121
Identities = 265/635 (41%), Positives = 382/635 (60%)
Query: 25 LIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDV- 83
L+ E+EAE++ + +L Q++G +L L+ + +TGL G+ L+ FQ K D
Sbjct: 12 LLREEREAELAERRAWQENVSLKELQRRGVCLLKLQAANQRTGLYGRLLVTFQPRKYDSD 71
Query: 84 --LPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLN----SP 137
LP + FG D+V L + G L G++ R+ ++TVAF++ + L+ S
Sbjct: 72 SELPYNSFGPGDIVGLYDSVGQ-GD-LLSTGIITRVTSKAVTVAFEESRDGMLSVDHESS 129
Query: 138 LRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNL 197
RL KLAN++TY R+K AL L K GPA+ LI VLF P+ + K +N +L
Sbjct: 130 YRLLKLANDITYNRIKKALNTL-KQYHGGPASDLIDVLFFSLDPSPSSETKPLKLYNDSL 188
Query: 198 DHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGSKILACAASNIAVDNIX 257
D SQ++A+S +L+ K + ++H VVEIILQ V++G K+L CA SN+AVDN+
Sbjct: 189 DASQREAVSFSLAQKELAIVHGPPGTGKTTTVVEIILQAVQQGLKVLCCAPSNVAVDNLV 248
Query: 258 XXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKD 317
GHPARLL + + +LDA + R D++ + +D+RK++ K K +D
Sbjct: 249 ERLAGYKARILRLGHPARLLEPIQQHSLDAVLARSDSAQIVADVRKDIDQAFAKSKKAQD 308
Query: 318 KNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS----RKLDNTSFDLV 373
K R E++ L KE ++R++ A+T + +A VVL T TGA S + L FDLV
Sbjct: 309 KGERGHFLSEIKALRKELKEREETAMTAALTHASVVLATNTGASSDGPLKLLPENYFDLV 368
Query: 374 IIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGD 433
+IDE AQALE +CWI LLK +CILAGDH QLPPT+ S +A KGL +L ER+ + YG+
Sbjct: 369 VIDECAQALEASCWIPLLKAPKCILAGDHKQLPPTIISHKAAAKGLSLSLMERVIERYGE 428
Query: 434 EVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLID 483
+V MLTVQYRMHE IM W+S ++Y ++ AHPS GV T T LLLID
Sbjct: 429 KVVKMLTVQYRMHEAIMQWASSEMYGGRLTAHPSVAQHLLKDLPGVTCTEETTIPLLLID 488
Query: 484 IAGCDMEEKK-DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
AGC + E + ++E S N GE ++ H + L+ +GV A D+ ++ PY QV +L+
Sbjct: 489 TAGCGLLELEVEDEQSKGNPGEVQLVGLHIQALVDAGVKARDVAVVAPYNLQVDMLR--E 546
Query: 543 SKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCL 602
+ +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR+NVAVTRARR +
Sbjct: 547 HLCHRYPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAI 606
Query: 603 VCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+CD+ TV S FL RL+E+F +H + + EYL++
Sbjct: 607 ICDSRTVGSQAFLGRLLEHFRQHGQVRTAFEYLDD 641
>UNIPROTKB|F1RY71 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0051260 GO:GO:0043022 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:CU694814 RefSeq:XP_003122472.2
Ensembl:ENSSSCT00000014076 GeneID:100520173 KEGG:ssc:100520173
Uniprot:F1RY71
Length = 987
Score = 1174 (418.3 bits), Expect = 2.9e-119, P = 2.9e-119
Identities = 269/649 (41%), Positives = 385/649 (59%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV L++LE+ AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVIKQLDLLELERSAEVEERRSWQENVSLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + VLP++ F + D+V L + L + GV+ R+ +TVA D
Sbjct: 62 RLLVTFEPRRCASAAVLPSNSFTSGDIVGLYDEDSQLAT-----GVLTRITQKLVTVALD 116
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ L+ RL KLAN+VTY+R+K AL L K +GPA+ LI VLFG P+
Sbjct: 117 ASHDFQLSLDRERSYRLLKLANDVTYKRLKKALTTLQK-YHSGPASALIEVLFGASAPSP 175
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGSKI 243
+N+ LD SQK+A+ ALS K + ++H VVEIILQ VK+GSK+
Sbjct: 176 ASDIPPLTFYNTALDASQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGSKV 235
Query: 244 LACAASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SN+AVDN+ GHPARLL + + +LDA + R D + + +DIR+
Sbjct: 236 LCCAPSNVAVDNLVERLARWKQRIVRLGHPARLLESIQQHSLDAVLARSDGARVVADIRR 295
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + GK KT+DK + + E++ L KE ++R++ A+ + + A VVL T GA S
Sbjct: 296 DIDQVLGKTKKTQDKREKSHFRDEIKLLRKELKEREEAAMLESLTAARVVLATNAGASSD 355
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L + FD+V+IDE AQALE +CW+ LLK +CILAGDH QLPPT+ S +A GL
Sbjct: 356 GPLKLLPDGHFDVVVIDECAQALEASCWVPLLKARKCILAGDHKQLPPTIISHKAALAGL 415
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERL + G V MLTVQYRMH+ I W+S+ LY+ ++ AH S GV
Sbjct: 416 ALSLMERLVEERGAGVLRMLTVQYRMHQAIAQWASEALYHGRLTAHASVAGHLLRDLPGV 475
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A D+ +I
Sbjct: 476 AATEETGIPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVRLHVQALVDAGVPAGDVAVI 535
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
TPY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 536 TPYNLQVDLLR--QSLAQRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 593
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR +VCD+ TVS+ FLK L+ YF EH E + EYL++
Sbjct: 594 INVAVTRARRHVAVVCDSRTVSNHAFLKTLVAYFAEHGEVRTAFEYLDD 642
>DICTYBASE|DDB_G0271732 [details] [associations]
symbol:DDB_G0271732 "AN1-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0032508 "DNA duplex unwinding"
evidence=ISS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51061
SMART:SM00382 dictyBase:DDB_G0271732 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 EMBL:AAFI02000006 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
OMA:HARQRIS RefSeq:XP_645520.1 ProteinModelPortal:Q75JA0
PRIDE:Q75JA0 EnsemblProtists:DDB0232283 GeneID:8618149
KEGG:ddi:DDB_G0271732 InParanoid:Q75JA0 ProtClustDB:CLSZ2846906
Uniprot:Q75JA0
Length = 1024
Score = 956 (341.6 bits), Expect = 6.5e-116, Sum P(3) = 6.5e-116
Identities = 208/469 (44%), Positives = 293/469 (62%)
Query: 194 NSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGSKILACAASNIAV 253
N L+ SQK+AI +LSS +V +H VVE I+Q +K G K+LAC SN++V
Sbjct: 232 NKGLNQSQKEAILFSLSSNDVACIHGPPGTGKTTTVVEFIVQLIKSGKKVLACGPSNLSV 291
Query: 254 DNIXXXXXXXXXXXX---------XXGHPARLLPQVLESALDAQVLRGDNSSLASDIRKE 304
DN+ GHP R+LPQ+L+ LD + + + I+ E
Sbjct: 292 DNMLEKLLEYSNSSSCNGFLINATRIGHPTRILPQLLKHTLDHKTKNSEGGQIIKGIKDE 351
Query: 305 MKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRK 364
+K+L+ +LLK K + RR IQ ++ L + + R++ + VI +++V+L+T TGA
Sbjct: 352 IKSLSKQLLKVKQHSERRVIQSSIKELRIDLKNREKSLIQQVINDSNVILSTNTGASDSS 411
Query: 365 LDNT-SFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTL 423
L +FD V+IDE AQALE +CWI + KG++ +LAGDH QLPPT+ S+EA K GL TL
Sbjct: 412 LKGIDNFDWVVIDECAQALEASCWIPIQKGNKLLLAGDHQQLPPTIHSMEAAKMGLSITL 471
Query: 424 FERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS--------G----VKR 471
FER+ YGD+V+ +L VQYRM+ IM+WSS + YNSK+ A S G ++
Sbjct: 472 FERIIKQYGDQVSRLLNVQYRMNHKIMDWSSMEFYNSKMIADKSVSNHLLVTGDSPKIRN 531
Query: 472 TSSTEPTLLLIDIAGCDMEEKKDEE-DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITP 530
T +T LL+ID +GCDMEE +D+E +S N GE V H ++LI+ GV +DIG+ITP
Sbjct: 532 TLTTTCPLLMIDTSGCDMEESQDDEGESKFNNGEVIVVKRHIEKLIECGVKPNDIGVITP 591
Query: 531 YAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK--EVGFLSDRRR 588
Y QV LLK SK K +ME+ TVDGFQGREK+ IIISMVRSN+ +VGFL++ RR
Sbjct: 592 YNGQVKLLKSYLSK--KYSSMEIGTVDGFQGREKDVIIISMVRSNTDAPHKVGFLTEDRR 649
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
NVA+TRAR+ +VCDT+T+SS LKR+++YF+ + + S EY+ +
Sbjct: 650 TNVAITRARKHVVVVCDTDTISSHEPLKRMVDYFKLNGLFRSALEYIED 698
Score = 130 (50.8 bits), Expect = 6.5e-116, Sum P(3) = 6.5e-116
Identities = 31/91 (34%), Positives = 53/91 (58%)
Query: 84 LPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEG--LNSPL--- 138
LP HK D+V ++P+K+ G+ +GVVY++ I +AFDD E+ N P+
Sbjct: 99 LPPHKISNGDIVGIRPSKSKPGTNHYFKGVVYKVDSRKIVIAFDDNYEDSDPNNRPMLDE 158
Query: 139 ------RLEKLANEVTYRRMKDALIQLSKGV 163
++KLAN+VTY++++++L +L V
Sbjct: 159 YFQTLYSIDKLANDVTYKKIRESLDKLKLNV 189
Score = 91 (37.1 bits), Expect = 6.5e-116, Sum P(3) = 6.5e-116
Identities = 18/61 (29%), Positives = 38/61 (62%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
++ ++ L+D+EKE+E++ +I + A+ + + KG TI +K ++ TGL G+ L+
Sbjct: 1 MENYIKKTLELLDIEKESEVNEAIENFATLSNKELELKGVTINKVKILNFSTGLSGRILI 60
Query: 75 E 75
+
Sbjct: 61 K 61
Score = 55 (24.4 bits), Expect = 1.1e-09, Sum P(4) = 1.1e-09
Identities = 16/73 (21%), Positives = 39/73 (53%)
Query: 311 KLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTL-TGAVSRKLDNT- 368
K+ KDK ++ I+++ + +K++ ++Q+ ++ +V T + T S +T
Sbjct: 741 KIEMLKDKKNKKSIEEKEKKKNKDDLEKQEEKEKLRLQLESIVNTFMKTSMESHSFPSTL 800
Query: 369 -SFDLVIIDEAAQ 380
SF+ +++ E A+
Sbjct: 801 SSFERLVVHELAE 813
Score = 38 (18.4 bits), Expect = 1.1e-09, Sum P(4) = 1.1e-09
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 488 DMEEKKDEEDSTMNEG 503
D +E+ DE++ N+G
Sbjct: 855 DEDEENDEDEQKENDG 870
>POMBASE|SPCC737.07c [details] [associations]
symbol:SPCC737.07c "DNA polymerase alpha-associated DNA
helicase A (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006273
"lagging strand elongation" evidence=ISO] [GO:0033203 "DNA helicase
A complex" evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=ISO] [GO:0043596 "nuclear replication
fork" evidence=IC] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=ISO] InterPro:IPR003593 SMART:SM00382
PomBase:SPCC737.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG1112 GO:GO:0006273
GO:GO:0043141 PIR:T41580 RefSeq:NP_588369.1
ProteinModelPortal:O94247 STRING:O94247 EnsemblFungi:SPCC737.07c.1
GeneID:2539412 KEGG:spo:SPCC737.07c HOGENOM:HOG000185831
OMA:ERTIFLE OrthoDB:EOG444PTN NextBio:20800576 GO:GO:0033203
Uniprot:O94247
Length = 660
Score = 925 (330.7 bits), Expect = 7.0e-93, P = 7.0e-93
Identities = 236/649 (36%), Positives = 350/649 (53%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
+Q+F +D +++E+ + S L Q+KG ++NL+ +TG GKT++
Sbjct: 15 IQKFGDREIEFVDEAQKSEVDETEKSIKRFPLSVLQRKGLALINLRIGVVKTGFGGKTII 74
Query: 75 EFQS----TKGDVLPAHKFGTHDVVVLK----------PNKADLGSPALGQGVVYRLKDS 120
+F+ + G+ LPA+ F DVV ++ PN+ D+ +GVV R+ +
Sbjct: 75 DFEKDPAFSNGEELPANSFSPGDVVSIRQDFQSSKKKRPNETDISV----EGVVTRVHER 130
Query: 121 SITVAF---DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFG 177
I+VA +DIP L + KL N VTY RM+ +++ + + + L L G
Sbjct: 131 HISVALKSEEDIPSSVTR--LSVVKLVNRVTYERMRHTMLEFKRSIPEYRNS-LFYTLIG 187
Query: 178 EQKPTVL--KKDIA-FKPFNSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIIL 234
+K V +K I K FN L+ SQK A+ +++ K + ++H +VEII
Sbjct: 188 RKKADVSIDQKLIGDIKYFNKELNASQKKAVKFSIAVKELSLIHGPPGTGKTHTLVEIIQ 247
Query: 235 QEVKRGSKILACAASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDN 294
Q V R +IL C ASN+AVDNI GHPARLLP +L+ +LD GDN
Sbjct: 248 QLVLRNKRILVCGASNLAVDNIVDRLSSSGIPMVRLGHPARLLPSILDHSLDVLSRTGDN 307
Query: 295 SSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVL 354
+ I +++ K+ KTK+ RREI K +R L K+ RK + V +++ + VV
Sbjct: 308 GDVIRGISEDIDVCLSKITKTKNGRERREIYKNIRELRKDYRKYEAKTVANIVSASKVVF 367
Query: 355 TTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA 414
TL GA SR+L FD VIIDEA+QALE CWI LL ++ ILAGDH+QL P VQS
Sbjct: 368 CTLHGAGSRQLKGQRFDAVIIDEASQALEPQCWIPLLGMNKVILAGDHMQLSPNVQS--- 424
Query: 415 EKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSK-IKAHP------- 466
K ++FERL GD V L +QYRMHE I + S Y+SK + A
Sbjct: 425 --KRPYISMFERLVKSQGDLVKCFLNIQYRMHELISKFPSDTFYDSKLVPAEEVKKRLLM 482
Query: 467 --SGVKRTSSTEPTLLLIDIAGCDMEEKKDEE------DSTMNEGEAEVAMAHAKRLIQS 518
V+ T T+ + D G E+ + E+ DS N EA++ H L+++
Sbjct: 483 DLENVEETELTDSPIYFYDTLGNYQEDDRSEDMQNFYQDSKSNHWEAQIVSYHISGLLEA 542
Query: 519 GVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK 578
G+ A DI ++TPY AQV L++ L +K +E+ +VD QGREKEAII S+VRSN +
Sbjct: 543 GLEAKDIAVVTPYNAQVALIRQLLK--EKGIEVEMGSVDKVQGREKEAIIFSLVRSNDVR 600
Query: 579 EVGFLSDRRRMNVAVTRARRQCCLVCDTETVS-SDGFLKRLIEYFEEHA 626
EVGFL+++RR+NVA+TR +R C++ D+ TV + F + +++ EE+A
Sbjct: 601 EVGFLAEKRRLNVAITRPKRHLCVIGDSNTVKWASEFFHQWVDFLEENA 649
>SGD|S000001500 [details] [associations]
symbol:HCS1 "Hexameric DNA polymerase alpha-associated DNA
helicase A" species:4932 "Saccharomyces cerevisiae" [GO:0003677
"DNA binding" evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=IDA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IDA] [GO:0006273 "lagging
strand elongation" evidence=IC] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0033203 "DNA helicase A
complex" evidence=IDA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 SGD:S000001500 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 EMBL:BK006944 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:X74152 GO:GO:0006273 GO:GO:0043141
HOGENOM:HOG000185831 OrthoDB:EOG444PTN GO:GO:0033203 EMBL:Z28017
PIR:S34700 RefSeq:NP_012908.1 ProteinModelPortal:P34243 SMR:P34243
DIP:DIP-1383N IntAct:P34243 MINT:MINT-399891 STRING:P34243
PaxDb:P34243 EnsemblFungi:YKL017C GeneID:853852 KEGG:sce:YKL017C
CYGD:YKL017c GeneTree:ENSGT00700000104572 OMA:QGGDFPE
SABIO-RK:P34243 NextBio:975085 Genevestigator:P34243
GermOnline:YKL017C TIGRFAMs:TIGR00376 Uniprot:P34243
Length = 683
Score = 428 (155.7 bits), Expect = 2.8e-70, Sum P(3) = 2.8e-70
Identities = 136/431 (31%), Positives = 223/431 (51%)
Query: 96 VLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLN-----SPLRLEKLANEVTYR 150
V K ++ G A GVVY++ D+ IT+A ++ + S L + K N VTY
Sbjct: 101 VKKVSEDSNGEQAECSGVVYKMSDTQITIALEESQDVIATTFYSYSKLYILKTTNVVTYN 160
Query: 151 RMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIA--FKPF-NSNLDHSQKDAISK 207
RM+ + +LS+ + + +I L E +P + + K F N NL+ SQK AI+
Sbjct: 161 RMESTMRKLSE-ISSPIQDKIIQYLVNE-RPFIPNTNSFQNIKSFLNPNLNDSQKTAINF 218
Query: 208 ALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRG--SKILACAASNIAVDNIXXXXXXXX- 264
A+++ ++ ++H ++E+I Q + + +IL C SNI+VD I
Sbjct: 219 AINN-DLTIIHGPPGTGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVP 277
Query: 265 -XXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
GHPARLL +LD +L N+ + DI +E+ L + K K+ R+E
Sbjct: 278 NNLLLRIGHPARLLDSNKRHSLD--ILSKKNT-IVKDISQEIDKLIQENKKLKNYKQRKE 334
Query: 324 IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKL-----DNTSF---DLVII 375
E++ L K+ +KR+ + D+I + +V+TTL G+ SR+L D+ +F D +II
Sbjct: 335 NWNEIKLLRKDLKKREFKTIKDLIIQSRIVVTTLHGSSSRELCSLYRDDPNFQLFDTLII 394
Query: 376 DEAAQALEIACWIALLKGS----RCILAGDHLQLPPTVQSVEAEKK---GLGRTLFERLA 428
DE +QA+E CWI L+ + +LAGD+ QLPPT+++ E +K L TLF+R+
Sbjct: 395 DEVSQAMEPQCWIPLIAHQNQFHKLVLAGDNKQLPPTIKT-EDDKNVIHNLETTLFDRII 453
Query: 429 DLYGD-EVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGC 487
++ ++ L VQYRM++ IM + S +YN K+ A + R LLID+
Sbjct: 454 KIFPKRDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADATVANR--------LLIDLPTV 505
Query: 488 DMEEKKDEEDS 498
D +D++D+
Sbjct: 506 DATPSEDDDDT 516
Score = 311 (114.5 bits), Expect = 2.8e-70, Sum P(3) = 2.8e-70
Identities = 78/181 (43%), Positives = 108/181 (59%)
Query: 462 IKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEED---STMNEGEAEVAMAHAKRLIQS 518
+ A PS + T+ L+ D G + +E DE S NEGE + H + L
Sbjct: 505 VDATPS--EDDDDTKIPLIWYDTQGDEFQETADEATILGSKYNEGEIAIVKEHIENLRSF 562
Query: 519 GVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK 578
V + IG+I+PY AQV LK L + KL ++E+STVDGFQGREK+ II+S+VRSN K
Sbjct: 563 NVPENSIGVISPYNAQVSHLKKLIHDELKLTDIEISTVDGFQGREKDVIILSLVRSNEKF 622
Query: 579 EVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG--FLKRLIEYFEEHAE--YLSGSEY 634
EVGFL + RR+NVA+TR RRQ +V + E + G +LK E+ EE+A+ Y + +Y
Sbjct: 623 EVGFLKEERRLNVAMTRPRRQLVVVGNIEVLQRCGNKYLKSWSEWCEENADVRYPNIDDY 682
Query: 635 L 635
L
Sbjct: 683 L 683
Score = 60 (26.2 bits), Expect = 2.8e-70, Sum P(3) = 2.8e-70
Identities = 19/93 (20%), Positives = 40/93 (43%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLE 75
+E S I E+E +I + + ++ + G I N+ + ++GL+GK +E
Sbjct: 3 KELASKFLSSIKHEREQDIQTTSRLLTTLSIQQLVQNGLAINNIHLENIRSGLIGKLYME 62
Query: 76 F--QSTKGDVLPAHKFGTHDVVVLKPNKADLGS 106
D + D+V+++P K + +
Sbjct: 63 LGPNLAVNDKIQRGDIKVGDIVLVRPAKTKVNT 95
>TAIR|locus:2162858 [details] [associations]
symbol:AT5G35970 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] EMBL:CP002688 GO:GO:0009570 GO:GO:0003677
GO:GO:0009941 InterPro:IPR014001 SMART:SM00487 IPI:IPI00520082
RefSeq:NP_198446.3 UniGene:At.45828 ProteinModelPortal:F4K1G7
SMR:F4K1G7 PRIDE:F4K1G7 EnsemblPlants:AT5G35970.1 GeneID:833589
KEGG:ath:AT5G35970 OMA:DHFQREL Uniprot:F4K1G7
Length = 961
Score = 434 (157.8 bits), Expect = 7.8e-68, Sum P(3) = 7.8e-68
Identities = 115/368 (31%), Positives = 193/368 (52%)
Query: 139 RLEKLANEVTYRRMKDALIQLSK-GVQN-GPAAGLIPVLFG--------EQKPTV--LKK 186
R+ LA+ +TY R +AL+ L K G+Q P+ ++ LFG EQ V +
Sbjct: 417 RIHGLADALTYERNCEALMLLQKNGLQKKNPSISVVATLFGDGEDITWLEQNDYVDWSEA 476
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKN-VFMLHXXXXXXXXXXVVEIILQEVKRGSKILA 245
+++ +P + D SQ+ AI+ ++ K V ++ + E+I V++G ++L
Sbjct: 477 ELSDEPVSKLFDSSQRRAIALGVNKKRPVMIVQGPPGTGKTGMLKEVITLAVQQGERVLV 536
Query: 246 CAASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEM 305
A +N AVDN+ G+PAR+ V +L +++ +S +++ ++
Sbjct: 537 TAPTNAAVDNMVEKLLHLGLNIVRVGNPARISSAVASKSL-GEIVNSKLASFRAELERKK 595
Query: 306 KALNGKLLKT-KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS-- 362
L L + +D I++ L+ L K +K+++ V +++ NA VV T GA
Sbjct: 596 SDLRKDLRQCLRDDVLAAGIRQLLKQLGKTLKKKEKETVKEILSNAQVVFATNIGAADPL 655
Query: 363 -RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGR 421
R+L+ +FDLV+IDEA Q++E +CWI +L+G RCIL+GD QL P V S +A + GLG
Sbjct: 656 IRRLE--TFDLVVIDEAGQSIEPSCWIPILQGKRCILSGDPCQLAPVVLSRKALEGGLGV 713
Query: 422 TLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLL 481
+L ER A L+ + + LT QYRM++ I W+SK++Y +K+ PS P +
Sbjct: 714 SLLERAASLHDGVLATKLTTQYRMNDVIAGWASKEMYGGWLKSAPSVASHLLIDSPFVKA 773
Query: 482 IDIAGCDM 489
I C +
Sbjct: 774 TWITQCPL 781
Score = 303 (111.7 bits), Expect = 7.8e-68, Sum P(3) = 7.8e-68
Identities = 80/181 (44%), Positives = 105/181 (58%)
Query: 469 VKRTSSTEPTLLLIDI--------AGCDMEEKKDEED--STMNEGEAEVAMAHAKRLIQS 518
VK T T+ L+L+D GC EE+ D S NEGEA++ + H LI +
Sbjct: 771 VKATWITQCPLVLLDTRMPYGSLSVGC--EERLDPAGTGSLYNEGEADIVVNHVISLIYA 828
Query: 519 GVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK 578
GV I + +PY AQV LL+ +EV+T+D FQGRE +A+IISMVRSN+
Sbjct: 829 GVSPMAIAVQSPYVAQVQLLRERLDDFPVADGVEVATIDSFQGREADAVIISMVRSNNLG 888
Query: 579 EVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRL---IEYFE--EHAE--YLSG 631
VGFL D RRMNVA+TRAR+ +VCD+ T+ + FL RL I YF +HA+ L G
Sbjct: 889 AVGFLGDSRRMNVAITRARKHVAVVCDSSTICHNTFLARLLRHIRYFGRVKHADPGSLGG 948
Query: 632 S 632
S
Sbjct: 949 S 949
Score = 121 (47.7 bits), Expect = 6.1e-32, Sum P(3) = 6.1e-32
Identities = 52/180 (28%), Positives = 82/180 (45%)
Query: 44 RNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKP-NKA 102
R+ D Q+ TI NL V TGL G L+ F+ LP D+V ++ +
Sbjct: 311 RHGDAPQELCDTICNLYAVSTSTGLGGMHLVLFKVGGNHRLPPTTLSPGDMVCIRVCDSR 370
Query: 103 DLGSPALGQGVVYRLKDS--SITVAFDDIPEEGLNSPL--------RLEKLANEVTYRRM 152
G+ A QG V+ L + SI VA + + S L R+ LA+ +TY R
Sbjct: 371 GAGATACTQGFVHNLGEDGCSIGVALESRHGDPTFSKLFGKSVRIDRIHGLADALTYERN 430
Query: 153 KDALIQLSK-GVQN-GPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALS 210
+AL+ L K G+Q P+ ++ LFG+ + DI + N +D S+ + + +S
Sbjct: 431 CEALMLLQKNGLQKKNPSISVVATLFGDGE------DITWLEQNDYVDWSEAELSDEPVS 484
Score = 51 (23.0 bits), Expect = 7.8e-68, Sum P(3) = 7.8e-68
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 1 MEGRKTKEKQSAVSLQEFVSVMAPLIDLEKEAEISAS 37
M+ K K Q + EF S M+ L+ +E++ E+ +
Sbjct: 252 MDSEKVKAIQERID--EFTSQMSQLLQVERDTELEVT 286
>CGD|CAL0006154 [details] [associations]
symbol:orf19.6199 species:5476 "Candida albicans" [GO:0043141
"ATP-dependent 5'-3' DNA helicase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IEA] [GO:0033203 "DNA helicase
A complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR004483 SMART:SM00382
CGD:CAL0006154 GO:GO:0005524 GO:GO:0003677 GO:GO:0017111
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000038
EMBL:AACQ01000037 TIGRFAMs:TIGR00376 RefSeq:XP_718706.1
RefSeq:XP_718790.1 ProteinModelPortal:Q5AAW1 STRING:Q5AAW1
GeneID:3639532 GeneID:3639630 KEGG:cal:CaO19.13579
KEGG:cal:CaO19.6199 Uniprot:Q5AAW1
Length = 719
Score = 342 (125.4 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 98/334 (29%), Positives = 171/334 (51%)
Query: 111 QGVVYRLKDSSITVAFDDIPEEG--------LNSPLR--LEKLANEVTYRRM---KDALI 157
+ VV ++ +I+++ D+ ++ N R L KL N +TY+RM D ++
Sbjct: 121 EAVVIKVSTQTISISVDESTDDSKILQYYNNTNDSARMWLVKLTNSITYKRMITTMDKVL 180
Query: 158 QLSKGVQNGPAAGLIPVLFGEQK--P----TVLKKDIAFKPFNSNLDHSQKDAISKALSS 211
+ + +N + +L GE + P T + FN L+ SQ+ AI A++
Sbjct: 181 AMKESDKND----IHKILLGESQYIPKSNGTSNNNNGEINFFNDKLNASQRQAIDFAIND 236
Query: 212 KNVFMLHXXXXXXXXXXVVEIILQEVKRGSKILACAASNIAVDNIXXXXXXXXX--XXXX 269
N+ ++H ++E+I Q +G K+L C SNI+VD I
Sbjct: 237 SNITIIHGPPGTGKTYTLIELIQQLTSKGEKVLVCGPSNISVDTILERLGDKYEPMKLIR 296
Query: 270 XGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELR 329
GHPARLL + L+ +L+ + + + ++I +++++ K+ K K R+ + EL+
Sbjct: 297 IGHPARLLMKNLQHSLEI-LSKTYGRDIINEILNDIQSVLTKIKKCKKYGERKALYSELK 355
Query: 330 TLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS---------FDLVIIDEAAQ 380
L KE R+R++ V +++ A VV+ TL G+ S +L N+ FD +IIDE +Q
Sbjct: 356 LLKKELRQRERKIVNELLVQAQVVVATLHGSGSYELKNSVGTNNNEGIVFDTIIIDEVSQ 415
Query: 381 ALEIACWIALLKGSR---CILAGDHLQLPPTVQS 411
+LE CWI LL +R ++AGD++QLPPT+++
Sbjct: 416 SLEPQCWIPLLLSNRFKRLVIAGDNMQLPPTIKT 449
Score = 308 (113.5 bits), Expect = 7.8e-27, Sum P(2) = 7.8e-27
Identities = 91/295 (30%), Positives = 147/295 (49%)
Query: 272 HPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTL 331
H +L + + ++L D S+ + I+K K K L ++ K ++E+++ R +
Sbjct: 310 HSLEILSKTYGRDIINEILN-DIQSVLTKIKKCKKYGERKALYSELKLLKKELRQRERKI 368
Query: 332 SKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL 391
E + Q+ V + + L G + + FD +IIDE +Q+LE CWI LL
Sbjct: 369 VNELLVQAQVVVATLHGSGSYELKNSVGTNNN--EGIVFDTIIIDEVSQSLEPQCWIPLL 426
Query: 392 KGSR---CILAGDHLQLPPTVQSVEAEKKG----------LGRTLFERLAD-LYGDEVTS 437
+R ++AGD++QLPPT+++ ++ L TLF+RL +G++
Sbjct: 427 LSNRFKRLVIAGDNMQLPPTIKTQKSNSSSPSSSSSSASILATTLFDRLMKHCHGEKYKK 486
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGC 487
+L VQYRM++ IM + S QLY++++K S GV+ T + D G
Sbjct: 487 LLDVQYRMNKSIMQFPSMQLYDNQLKCDDSVREISLVDLPGVEINDDTMTKCIWYDTQGG 546
Query: 488 DMEEKKDEE---DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK 539
+ E+ E DS N+ E V H K+L+ SGV DIG+I PY+AQV LK
Sbjct: 547 EFPEQISESIDGDSKYNDMELLVVKGHIKKLLSSGVQPQDIGVIAPYSAQVQNLK 601
Score = 306 (112.8 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 73/171 (42%), Positives = 103/171 (60%)
Query: 468 GVKRTSSTEPTLLLIDIAGCDMEEKKDEE---DSTMNEGEAEVAMAHAKRLIQSGVHASD 524
GV+ T + D G + E+ E DS N+ E V H K+L+ SGV D
Sbjct: 527 GVEINDDTMTKCIWYDTQGGEFPEQISESIDGDSKYNDMELLVVKGHIKKLLSSGVQPQD 586
Query: 525 IGIITPYAAQVVLLK--------ILRSKD-DKLKNMEVSTVDGFQGREKEAIIISMVRSN 575
IG+I PY+AQV LK + S + DK +E+STVDGFQGREKE II+++VRSN
Sbjct: 587 IGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDGQIEISTVDGFQGREKEVIILTLVRSN 646
Query: 576 SKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG--FLKRLIEYFEE 624
+E+GFLS++RR+NVA+TR +RQ C+V D E ++ G FL+ ++ E+
Sbjct: 647 DSREIGFLSEQRRLNVAMTRPKRQLCVVGDLELMNQSGNKFLQSWSKFVED 697
Score = 70 (29.7 bits), Expect = 7.8e-27, Sum P(2) = 7.8e-27
Identities = 41/184 (22%), Positives = 78/184 (42%)
Query: 25 LIDLEKEAEISASITSGASRNLDTAQ--KKGSTILNLKCVDAQTGLMGKTLLE--FQSTK 80
++D +KE ++T+ N + + G I+NL+ V+ +TGL GKT+LE F S
Sbjct: 11 ILDEQKE---DIALTTSYINNYPPKKLAQLGLGIINLQIVNIRTGLGGKTILELQFDSAF 67
Query: 81 GD-VLPAHKFGTHDVVVL-KPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPL 138
D + T D+V L K + L + + + K+ S T D+ E + +
Sbjct: 68 SDGEINTSTLRTGDIVKLAKMTSSALSNKSEKKKPSKNHKEESQTQDQSDVGIEAVVIKV 127
Query: 139 RLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPV---LFGEQKPTVLKKDIAFKPFNS 195
+ ++ V ++Q + L+ + + ++ T + K +A K +
Sbjct: 128 STQTISISVDESTDDSKILQYYNNTNDSARMWLVKLTNSITYKRMITTMDKVLAMKESDK 187
Query: 196 NLDH 199
N H
Sbjct: 188 NDIH 191
Score = 37 (18.1 bits), Expect = 3.8e-23, Sum P(2) = 3.8e-23
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 139 RLEKLANEVTYRRMKDALIQLSKGVQNGPAAGL 171
RL K + Y+++ D +++K + P+ L
Sbjct: 474 RLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQL 506
>UNIPROTKB|Q5AAW1 [details] [associations]
symbol:HCS1 "Putative uncharacterized protein HCS1"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR004483 SMART:SM00382 CGD:CAL0006154 GO:GO:0005524
GO:GO:0003677 GO:GO:0017111 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AACQ01000038 EMBL:AACQ01000037
TIGRFAMs:TIGR00376 RefSeq:XP_718706.1 RefSeq:XP_718790.1
ProteinModelPortal:Q5AAW1 STRING:Q5AAW1 GeneID:3639532
GeneID:3639630 KEGG:cal:CaO19.13579 KEGG:cal:CaO19.6199
Uniprot:Q5AAW1
Length = 719
Score = 342 (125.4 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 98/334 (29%), Positives = 171/334 (51%)
Query: 111 QGVVYRLKDSSITVAFDDIPEEG--------LNSPLR--LEKLANEVTYRRM---KDALI 157
+ VV ++ +I+++ D+ ++ N R L KL N +TY+RM D ++
Sbjct: 121 EAVVIKVSTQTISISVDESTDDSKILQYYNNTNDSARMWLVKLTNSITYKRMITTMDKVL 180
Query: 158 QLSKGVQNGPAAGLIPVLFGEQK--P----TVLKKDIAFKPFNSNLDHSQKDAISKALSS 211
+ + +N + +L GE + P T + FN L+ SQ+ AI A++
Sbjct: 181 AMKESDKND----IHKILLGESQYIPKSNGTSNNNNGEINFFNDKLNASQRQAIDFAIND 236
Query: 212 KNVFMLHXXXXXXXXXXVVEIILQEVKRGSKILACAASNIAVDNIXXXXXXXXX--XXXX 269
N+ ++H ++E+I Q +G K+L C SNI+VD I
Sbjct: 237 SNITIIHGPPGTGKTYTLIELIQQLTSKGEKVLVCGPSNISVDTILERLGDKYEPMKLIR 296
Query: 270 XGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELR 329
GHPARLL + L+ +L+ + + + ++I +++++ K+ K K R+ + EL+
Sbjct: 297 IGHPARLLMKNLQHSLEI-LSKTYGRDIINEILNDIQSVLTKIKKCKKYGERKALYSELK 355
Query: 330 TLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS---------FDLVIIDEAAQ 380
L KE R+R++ V +++ A VV+ TL G+ S +L N+ FD +IIDE +Q
Sbjct: 356 LLKKELRQRERKIVNELLVQAQVVVATLHGSGSYELKNSVGTNNNEGIVFDTIIIDEVSQ 415
Query: 381 ALEIACWIALLKGSR---CILAGDHLQLPPTVQS 411
+LE CWI LL +R ++AGD++QLPPT+++
Sbjct: 416 SLEPQCWIPLLLSNRFKRLVIAGDNMQLPPTIKT 449
Score = 308 (113.5 bits), Expect = 7.8e-27, Sum P(2) = 7.8e-27
Identities = 91/295 (30%), Positives = 147/295 (49%)
Query: 272 HPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTL 331
H +L + + ++L D S+ + I+K K K L ++ K ++E+++ R +
Sbjct: 310 HSLEILSKTYGRDIINEILN-DIQSVLTKIKKCKKYGERKALYSELKLLKKELRQRERKI 368
Query: 332 SKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL 391
E + Q+ V + + L G + + FD +IIDE +Q+LE CWI LL
Sbjct: 369 VNELLVQAQVVVATLHGSGSYELKNSVGTNNN--EGIVFDTIIIDEVSQSLEPQCWIPLL 426
Query: 392 KGSR---CILAGDHLQLPPTVQSVEAEKKG----------LGRTLFERLAD-LYGDEVTS 437
+R ++AGD++QLPPT+++ ++ L TLF+RL +G++
Sbjct: 427 LSNRFKRLVIAGDNMQLPPTIKTQKSNSSSPSSSSSSASILATTLFDRLMKHCHGEKYKK 486
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGC 487
+L VQYRM++ IM + S QLY++++K S GV+ T + D G
Sbjct: 487 LLDVQYRMNKSIMQFPSMQLYDNQLKCDDSVREISLVDLPGVEINDDTMTKCIWYDTQGG 546
Query: 488 DMEEKKDEE---DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK 539
+ E+ E DS N+ E V H K+L+ SGV DIG+I PY+AQV LK
Sbjct: 547 EFPEQISESIDGDSKYNDMELLVVKGHIKKLLSSGVQPQDIGVIAPYSAQVQNLK 601
Score = 306 (112.8 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 73/171 (42%), Positives = 103/171 (60%)
Query: 468 GVKRTSSTEPTLLLIDIAGCDMEEKKDEE---DSTMNEGEAEVAMAHAKRLIQSGVHASD 524
GV+ T + D G + E+ E DS N+ E V H K+L+ SGV D
Sbjct: 527 GVEINDDTMTKCIWYDTQGGEFPEQISESIDGDSKYNDMELLVVKGHIKKLLSSGVQPQD 586
Query: 525 IGIITPYAAQVVLLK--------ILRSKD-DKLKNMEVSTVDGFQGREKEAIIISMVRSN 575
IG+I PY+AQV LK + S + DK +E+STVDGFQGREKE II+++VRSN
Sbjct: 587 IGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDGQIEISTVDGFQGREKEVIILTLVRSN 646
Query: 576 SKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG--FLKRLIEYFEE 624
+E+GFLS++RR+NVA+TR +RQ C+V D E ++ G FL+ ++ E+
Sbjct: 647 DSREIGFLSEQRRLNVAMTRPKRQLCVVGDLELMNQSGNKFLQSWSKFVED 697
Score = 70 (29.7 bits), Expect = 7.8e-27, Sum P(2) = 7.8e-27
Identities = 41/184 (22%), Positives = 78/184 (42%)
Query: 25 LIDLEKEAEISASITSGASRNLDTAQ--KKGSTILNLKCVDAQTGLMGKTLLE--FQSTK 80
++D +KE ++T+ N + + G I+NL+ V+ +TGL GKT+LE F S
Sbjct: 11 ILDEQKE---DIALTTSYINNYPPKKLAQLGLGIINLQIVNIRTGLGGKTILELQFDSAF 67
Query: 81 GD-VLPAHKFGTHDVVVL-KPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPL 138
D + T D+V L K + L + + + K+ S T D+ E + +
Sbjct: 68 SDGEINTSTLRTGDIVKLAKMTSSALSNKSEKKKPSKNHKEESQTQDQSDVGIEAVVIKV 127
Query: 139 RLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPV---LFGEQKPTVLKKDIAFKPFNS 195
+ ++ V ++Q + L+ + + ++ T + K +A K +
Sbjct: 128 STQTISISVDESTDDSKILQYYNNTNDSARMWLVKLTNSITYKRMITTMDKVLAMKESDK 187
Query: 196 NLDH 199
N H
Sbjct: 188 NDIH 191
Score = 37 (18.1 bits), Expect = 3.8e-23, Sum P(2) = 3.8e-23
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 139 RLEKLANEVTYRRMKDALIQLSKGVQNGPAAGL 171
RL K + Y+++ D +++K + P+ L
Sbjct: 474 RLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQL 506
>TAIR|locus:2171007 [details] [associations]
symbol:LBA1 "LOW-LEVEL BETA-AMYLASE 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0016246 "RNA interference" evidence=IGI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA;RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0009755 "hormone-mediated
signaling pathway" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0009744 "response to sucrose stimulus"
evidence=IGI] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016246 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0009744 GO:GO:0008270 GO:GO:0010182
GO:GO:0004386 GO:GO:0000932 eggNOG:COG1112 InterPro:IPR014001
PROSITE:PS51192 EMBL:AB013394 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL EMBL:AF484122 IPI:IPI00541997 RefSeq:NP_199512.2
UniGene:At.8584 ProteinModelPortal:Q9FJR0 SMR:Q9FJR0 STRING:Q9FJR0
PaxDb:Q9FJR0 PRIDE:Q9FJR0 EnsemblPlants:AT5G47010.1 GeneID:834747
KEGG:ath:AT5G47010 GeneFarm:2422 TAIR:At5g47010 InParanoid:Q9FJR0
PhylomeDB:Q9FJR0 ProtClustDB:CLSN2680462 Genevestigator:Q9FJR0
GermOnline:AT5G47010 Uniprot:Q9FJR0
Length = 1254
Score = 443 (161.0 bits), Expect = 2.0e-39, P = 2.0e-39
Identities = 133/449 (29%), Positives = 217/449 (48%)
Query: 197 LDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGS-KILACAASNIAVDN 255
L+ SQ +A+ K++ K + ++ I+ K+G ++L CA SN+AVD
Sbjct: 489 LNASQVNAV-KSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 547
Query: 256 IXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ +R + + S ++ L L + + E+ KL +
Sbjct: 548 LAEKISATGLKVVRLCAKSR---EAVSSPVEYLTLHYQVRHLDTSEKSELH----KLQQL 600
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT-DVIKNADVVLTTLTGAVSRKLDNTSFDLVI 374
KD+ Q EL + +++ K + A ++ ++ADV+ T GA +L N F V+
Sbjct: 601 KDE------QGELSSSDEKKYKNLKRATEREITQSADVICCTCVGAADLRLSNFRFRQVL 654
Query: 375 IDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGD 433
IDE+ QA E C I L+ G + +L GDH QL P + +A + GL ++LFERL L
Sbjct: 655 IDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVTLGIK 714
Query: 434 EVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTE-----PTLLLIDIAGC 487
+ L VQYRMH + + S Y ++ + ++R T+ + P +
Sbjct: 715 PIR--LQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYVQL 772
Query: 488 DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDK 547
EE S +N EA ++SGV S IG+ITPY Q + +++
Sbjct: 773 GQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQIGVITPYEGQRAYIVNYMARNGS 832
Query: 548 L-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCL 602
L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR +
Sbjct: 833 LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVI 892
Query: 603 VCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+ + + +S L+ +++EH + G
Sbjct: 893 LGNPKVLSKQPLWNGLLTHYKEHECLVEG 921
>DICTYBASE|DDB_G0288923 [details] [associations]
symbol:upf1 "regulator of nonsense transcripts 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 dictyBase:DDB_G0288923
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AAFI02000126
GenomeReviews:CM000154_GR GO:GO:0003676 eggNOG:COG1112
GO:GO:0004004 KO:K14326 RefSeq:XP_636490.1
ProteinModelPortal:Q54I89 SMR:Q54I89 STRING:Q54I89
EnsemblProtists:DDB0233746 GeneID:8626873 KEGG:ddi:DDB_G0288923
InParanoid:Q54I89 Uniprot:Q54I89
Length = 1331
Score = 443 (161.0 bits), Expect = 2.2e-39, P = 2.2e-39
Identities = 178/646 (27%), Positives = 290/646 (44%)
Query: 17 EFVSVMAPLIDLEK--EAEISASIT-SGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
E+ +++PLI+LE E E+ S++ SG S ++ +Q G +N + T ++
Sbjct: 366 EYREIISPLIELEAKHEKELRESLSQSGIS--IEWSQ--G---INKRYT--ATFPFSRSD 416
Query: 74 LEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPA-LGQGVVYRLKDSSITVAFDDIPEE 132
LEF+ GD L + V+ D G + + L+ S +FD P+
Sbjct: 417 LEFKVVPGDELKLQFISSTGGVI---EWEDTGRVIHIDDENLLSLETKS-RCSFDSGPKG 472
Query: 133 GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKP 192
+ ++E MK I+ + ++ L L G DI P
Sbjct: 473 SYRMEMVWRSTSSERILSAMKSFAIK-----EQALSSYLYHALLGHPDIPPAPLDIQL-P 526
Query: 193 FNSNL------DHSQKDAISKALSSKNVFMLH--XXXXXXXXXXVVEIILQEVKRGSKIL 244
N +L + SQ A++K L++ + ++ +++ VK K+L
Sbjct: 527 TNFHLKNLPRLNESQISAVNKVLTAPLSLIQGPPGTGKTVISSFIIHHLVKYVKGNDKVL 586
Query: 245 ACAASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRG-DNSSLASDIRK 303
C SN+A+D + H L L S L +V ++ +L + K
Sbjct: 587 VCTPSNVAIDQLTGKL-----------HEIGLKVVRLSSKLREEVASPVEHLTLHKQVYK 635
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKR----QQLAVTDVIKNADVVLTTLTG 359
+ +G+L K R++++ +LS E+ KR +++ +++ ADV+ T G
Sbjct: 636 LDQMGDGELGKL------RKLKEAFGSLSNEDEKRYIYLRRMMEMAILRKADVICATCVG 689
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKG 418
A +L F ++IDE+ QA E C I L+ G++ IL GDH QL P + + G
Sbjct: 690 AGDPRLSQFRFPHILIDESTQASEPECLIPLMMGAKQVILVGDHRQLGPVLLCKKVVDAG 749
Query: 419 LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST--- 475
L ++LFERL L G LT+QYRMH + + S Y ++ + S R S +
Sbjct: 750 LSQSLFERLISL-GHH-PERLTIQYRMHPSLTEFPSNTSYEGQLVSELSHTDRDSQSKFP 807
Query: 476 --EPT--LLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPY 531
+P + + G EE S +N EA + + ++ G IGIITPY
Sbjct: 808 WPQPKDPMFFFNCTGS--EEISSSGTSFINTTEASICEKIVTKFLELGSLPGQIGIITPY 865
Query: 532 AAQVVLLKILRSKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR 586
Q + K KL K++EV++VD FQGREK+ II+S VRSN + +GFL D
Sbjct: 866 EGQRAYITSHMQKSGKLNLELYKSIEVASVDSFQGREKDYIILSCVRSNDYQGIGFLQDP 925
Query: 587 RRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
RR+NVA+TRAR ++ + + +S D LI +F+ + GS
Sbjct: 926 RRLNVALTRARFGLIILGNAKVLSKDPLWNSLISHFKNKNVLVEGS 971
>CGD|CAL0003666 [details] [associations]
symbol:NAM7 species:5476 "Candida albicans" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IEA] [GO:0008298 "intracellular mRNA localization"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
CGD:CAL0003666 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0004386 eggNOG:COG1112
InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000063
EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1 RefSeq:XP_716838.1
ProteinModelPortal:Q5A507 SMR:Q5A507 STRING:Q5A507 GeneID:3641489
GeneID:3641540 KEGG:cal:CaO19.8554 KEGG:cal:CaO19.939
Uniprot:Q5A507
Length = 1019
Score = 439 (159.6 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 162/570 (28%), Positives = 260/570 (45%)
Query: 88 KFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS---SITVAFDD---IPEEGLNSPLRLE 141
K D ++L+ + + G P G G + RL ++ T+ + IP L + E
Sbjct: 324 KVAVGDEIILRYS-GNQGEPWEGHGYILRLPNAYQEEFTLELNPSKIIPPTQLTTDFTAE 382
Query: 142 KLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFG-EQKPTVLKKDIAFK---PFNSNL 197
+ +Y RM+ A+ + + ++ + L G E P D+ K P + L
Sbjct: 383 FVWKGTSYDRMQQAMKDFATD-EESVSSFIYHKLLGHEVLPIEFDIDLPKKFSHPKLTEL 441
Query: 198 DHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGS-KILACAASNIAVDNI 256
+ SQ +A+ L + + ++ II K KIL CA SN+AVD++
Sbjct: 442 NVSQTNAVRTVLQ-RPLSLIQGPPGTGKTVTSATIIYHLSKLNKQKILVCAPSNVAVDHL 500
Query: 257 XXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK 316
+R + +ES++ L ++ + S+ + E+K KL+K K
Sbjct: 501 AAKLDLLGLNVVRLTAKSR---EDVESSVSHLAL---HNLVNSNAKGELK----KLIKLK 550
Query: 317 DKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIID 376
++ + + K R + V+ A+VV T GA R+L F V+ID
Sbjct: 551 NQVGELSVA-DTNNYLKLSRSSEM----KVLNKAEVVCCTCVGAADRRLSQFRFKTVLID 605
Query: 377 EAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEV 435
E+ QA E I ++KG++ IL GDH QL P + +A GL ++LFERL L V
Sbjct: 606 ESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILDKKAADAGLKQSLFERLVFL--GHV 663
Query: 436 TSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT--SSTEPTLLLIDI-----AGCD 488
L VQYRMH + + S Y ++ + R ST P + ID A
Sbjct: 664 PIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPV-IDTPMMFWANYG 722
Query: 489 MEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKI---L 541
EE +S +N EA +L + G+ IG+ITPY Q V + + L
Sbjct: 723 REELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQIGVITPYEGQRAYLVQFMSVNSTL 782
Query: 542 RSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
K D+ N+E+++VD FQGREK+ II+S VR+N + +GFLSD RR+NVA+TRA+
Sbjct: 783 LDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALTRAKYGLV 842
Query: 602 LVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
++ + ++ + L+ +F E + G
Sbjct: 843 ILGNPRSLCRNRLWNHLLIHFREKGCLVDG 872
>UNIPROTKB|Q5A507 [details] [associations]
symbol:NAM7 "Putative uncharacterized protein NAM7"
species:237561 "Candida albicans SC5314" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 CGD:CAL0003666 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
EMBL:AACQ01000063 EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1
RefSeq:XP_716838.1 ProteinModelPortal:Q5A507 SMR:Q5A507
STRING:Q5A507 GeneID:3641489 GeneID:3641540 KEGG:cal:CaO19.8554
KEGG:cal:CaO19.939 Uniprot:Q5A507
Length = 1019
Score = 439 (159.6 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 162/570 (28%), Positives = 260/570 (45%)
Query: 88 KFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS---SITVAFDD---IPEEGLNSPLRLE 141
K D ++L+ + + G P G G + RL ++ T+ + IP L + E
Sbjct: 324 KVAVGDEIILRYS-GNQGEPWEGHGYILRLPNAYQEEFTLELNPSKIIPPTQLTTDFTAE 382
Query: 142 KLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFG-EQKPTVLKKDIAFK---PFNSNL 197
+ +Y RM+ A+ + + ++ + L G E P D+ K P + L
Sbjct: 383 FVWKGTSYDRMQQAMKDFATD-EESVSSFIYHKLLGHEVLPIEFDIDLPKKFSHPKLTEL 441
Query: 198 DHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGS-KILACAASNIAVDNI 256
+ SQ +A+ L + + ++ II K KIL CA SN+AVD++
Sbjct: 442 NVSQTNAVRTVLQ-RPLSLIQGPPGTGKTVTSATIIYHLSKLNKQKILVCAPSNVAVDHL 500
Query: 257 XXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK 316
+R + +ES++ L ++ + S+ + E+K KL+K K
Sbjct: 501 AAKLDLLGLNVVRLTAKSR---EDVESSVSHLAL---HNLVNSNAKGELK----KLIKLK 550
Query: 317 DKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIID 376
++ + + K R + V+ A+VV T GA R+L F V+ID
Sbjct: 551 NQVGELSVA-DTNNYLKLSRSSEM----KVLNKAEVVCCTCVGAADRRLSQFRFKTVLID 605
Query: 377 EAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEV 435
E+ QA E I ++KG++ IL GDH QL P + +A GL ++LFERL L V
Sbjct: 606 ESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILDKKAADAGLKQSLFERLVFL--GHV 663
Query: 436 TSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT--SSTEPTLLLIDI-----AGCD 488
L VQYRMH + + S Y ++ + R ST P + ID A
Sbjct: 664 PIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPV-IDTPMMFWANYG 722
Query: 489 MEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKI---L 541
EE +S +N EA +L + G+ IG+ITPY Q V + + L
Sbjct: 723 REELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQIGVITPYEGQRAYLVQFMSVNSTL 782
Query: 542 RSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
K D+ N+E+++VD FQGREK+ II+S VR+N + +GFLSD RR+NVA+TRA+
Sbjct: 783 LDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALTRAKYGLV 842
Query: 602 LVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
++ + ++ + L+ +F E + G
Sbjct: 843 ILGNPRSLCRNRLWNHLLIHFREKGCLVDG 872
>UNIPROTKB|G4ND47 [details] [associations]
symbol:MGG_00976 "Regulator-nonsense transcripts 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 EMBL:CM001235 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
KO:K14326 RefSeq:XP_003717973.1 ProteinModelPortal:G4ND47
SMR:G4ND47 EnsemblFungi:MGG_00976T0 GeneID:2674784
KEGG:mgr:MGG_00976 Uniprot:G4ND47
Length = 1105
Score = 438 (159.2 bits), Expect = 9.4e-39, Sum P(2) = 9.4e-39
Identities = 148/476 (31%), Positives = 232/476 (48%)
Query: 174 VLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEII 233
V + T+ KK A P +L+ SQ AI KA+ S + ++ II
Sbjct: 431 VAVAPMRTTMPKKFTA--PGLPDLNGSQISAI-KAVLSTPLSLIQGPPGTGKTVTSATII 487
Query: 234 LQEVK-RGSKILACAASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRG 292
K GS++L CA SN+AVD + RL + E +++ V
Sbjct: 488 YHLAKMNGSQVLVCAPSNVAVDQLCERVHRTGLKV------VRLTAKSRED-VESSV--- 537
Query: 293 DNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIK 348
S LA + M N +L K + +++ EL LS ++E+K +QL A +++
Sbjct: 538 --SFLALHEQVRMNDTNPELAKLQ------QLKSELGELSSQDEKKFKQLTKAAEREILS 589
Query: 349 NADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPP 407
NADVV T GA +L F V+IDE+ Q+ E C I L+ G + +L GDH QL P
Sbjct: 590 NADVVCCTCVGAGDPRLAKLKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGP 649
Query: 408 TVQSVEAEKKGLGRTLFERLADLYGDEVTSM-LTVQYRMHEHIMNWSSKQLYNSKIKAHP 466
+ + +A K GL ++LFERL L G +T + L VQYRMH + + S Y ++
Sbjct: 650 VIMNKKAAKAGLNQSLFERLVKL-G--LTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGV 706
Query: 467 SGVKRTSSTE----PT--LLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGV 520
+ +R P + ++ + EE S +N EA R ++GV
Sbjct: 707 TIQQRLRRDVDFPWPVADMPMMFWSNLGNEEISASGTSYLNRTEASNVEKLVTRFFKAGV 766
Query: 521 HASDIGIITPYAAQ-VVLLKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSN 575
DIG++TPY Q ++ +++ K + K +EV++VD FQGREK+ I++S VRSN
Sbjct: 767 KPGDIGVVTPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSN 826
Query: 576 SKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+ +GFLSD RR+NVA+TRA+ ++ + + +S L+ +F + + G
Sbjct: 827 ESQGIGFLSDPRRLNVALTRAKYGVVIIGNPKVLSKHELWHHLLIHFRDRKCLVDG 882
Score = 39 (18.8 bits), Expect = 9.4e-39, Sum P(2) = 9.4e-39
Identities = 13/32 (40%), Positives = 14/32 (43%)
Query: 105 GSPALGQGVVYRLKDSSITVAFDDIPEEGLNS 136
G LG G R D T A DD +E L S
Sbjct: 44 GRGGLG-GARRRAADDDETEALDDDDDESLAS 74
>ZFIN|ZDB-GENE-040426-2836 [details] [associations]
symbol:upf1 "upf1 regulator of nonsense
transcripts homolog (yeast)" species:7955 "Danio rerio" [GO:0003677
"DNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009790 "embryo
development" evidence=IMP] InterPro:IPR018999 Pfam:PF09416
ZFIN:ZDB-GENE-040426-2836 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0009790 GO:GO:0004386
HOGENOM:HOG000205990 KO:K14326 CTD:5976 HOVERGEN:HBG061556
EMBL:BC045353 EMBL:FM986817 IPI:IPI00491565 RefSeq:NP_998639.1
UniGene:Dr.96025 SMR:Q7ZVZ4 STRING:Q7ZVZ4 GeneID:406783
KEGG:dre:406783 NextBio:20818296 Uniprot:Q7ZVZ4
Length = 1100
Score = 436 (158.5 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 172/610 (28%), Positives = 270/610 (44%)
Query: 47 DTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGS 106
D K+ T N+ V GL K + F K D + D + L+ K D+
Sbjct: 296 DKKLKESQTQDNIT-VRWDLGLNKKRIAYFTLPKTDSGDM-RLMQGDEICLR-YKGDMAP 352
Query: 107 PALGQGVVYRLKDS---SITVAFDDIPEEGLNSP--LRLEKLANEVTYRRMKDALIQLSK 161
G G V ++ D+ I + + P +++ + ++ RM+ AL +
Sbjct: 353 LWKGIGHVIKVPDNYGDEIAIELRSSAGAPVEVPHNFQVDFVWKSTSFDRMQSALKTFA- 411
Query: 162 GVQNGPAAGLI-PVLFGEQKPTVLKKDIAFKPFNS----NLDHSQKDAISKALSSKNVFM 216
V +G I L G + V+ K K F + +L+HSQ A+ K + + + +
Sbjct: 412 -VDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAV-KTVLQRPLSL 469
Query: 217 LHXXXXXXXXXXVVEIILQEVKRGS-KILACAASNIAVDNIXXXXXXXXXXXXXXGHPAR 275
+ I+ ++G+ +L CA SNIAVD + R
Sbjct: 470 IQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKV------VR 523
Query: 276 LLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKLLKTKDKNTRREIQKELRTLSK 333
L + E A+D+ V +L + IR M L KL + KD+ E K
Sbjct: 524 LCAKSRE-AIDSPV---SFLALHNQIRNMDSMPELQ-KLQQLKDETGELSSSDE-----K 573
Query: 334 EERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKG 393
R ++ A +++ NADV+ T GA +L F ++IDE+ QA E C + ++ G
Sbjct: 574 RYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLG 633
Query: 394 SR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNW 452
++ IL GDH QL P V +A K GL ++LFERL L + L VQYRMH + +
Sbjct: 634 AKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR--LQVQYRMHPALSAF 691
Query: 453 SSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAE 506
S Y ++ + R +P + EE S +N EA
Sbjct: 692 PSNIFYEGSLQNGVTAADRLKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAA 751
Query: 507 VAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQG 561
RL+++G IGIITPY Q V ++ S KL + +E+++VD FQG
Sbjct: 752 NVEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQG 811
Query: 562 REKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEY 621
REK+ II+S VR+N + +GFL+D RR+NVA+TRAR +V + + +S L+ Y
Sbjct: 812 REKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNY 871
Query: 622 FEEHAEYLSG 631
++E + G
Sbjct: 872 YKEQKVLVEG 881
>UNIPROTKB|E1C0J4 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0003677 GO:GO:0008270 GO:GO:0004386
GeneTree:ENSGT00550000074391 EMBL:AADN02071779 IPI:IPI00598917
Ensembl:ENSGALT00000005099 NextBio:20823079 ArrayExpress:E1C0J4
Uniprot:E1C0J4
Length = 1117
Score = 434 (157.8 bits), Expect = 2.9e-38, P = 2.9e-38
Identities = 173/611 (28%), Positives = 273/611 (44%)
Query: 47 DTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGS 106
D K+ T N+ V GL K + F K D + D + L+ K DL
Sbjct: 316 DKKLKESQTQDNIT-VRWDLGLNKKRIAYFTLPKTD--SDMRLMQGDEICLR-YKGDLAP 371
Query: 107 PALGQGVVYRLKDS-SITVAFD-----DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLS 160
G G V ++ D+ +A + P E ++ +++ + ++ RM+ AL +
Sbjct: 372 LWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKTFA 430
Query: 161 KGVQNGPAAGLI-PVLFGEQKPTVLKKDIAFKPFNS----NLDHSQKDAISKALSSKNVF 215
V +G I L G + V+ K K F + +L+HSQ A+ K + + +
Sbjct: 431 --VDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAV-KTVLQRPLS 487
Query: 216 MLHXXXXXXXXXXVVEIILQEVKRGS-KILACAASNIAVDNIXXXXXXXXXXXXXXGHPA 274
++ I+ ++G+ +L CA SNIAVD +
Sbjct: 488 LIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKV------V 541
Query: 275 RLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKLLKTKDKNTRREIQKELRTLS 332
RL + E A+D+ V +L + IR M L KL + KD+ E
Sbjct: 542 RLCAKSRE-AIDSPV---SFLALHNQIRNMDSMPELQ-KLQQLKDETGELSSADE----- 591
Query: 333 KEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLK 392
K R ++ A +++ NADV+ T GA +L F ++IDE+ QA E C + ++
Sbjct: 592 KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVL 651
Query: 393 GSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN 451
G++ IL GDH QL P V +A K GL ++LFERL L + L VQYRMH +
Sbjct: 652 GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR--LQVQYRMHPALSA 709
Query: 452 WSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEA 505
+ S Y ++ + R +P + EE S +N EA
Sbjct: 710 FPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEA 769
Query: 506 EVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQ 560
+L+++G IGIITPY Q V ++ S KL + +E+++VD FQ
Sbjct: 770 ANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQ 829
Query: 561 GREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
GREK+ II+S VR+N + +GFL+D RR+NVA+TRAR +V + + +S L+
Sbjct: 830 GREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLN 889
Query: 621 YFEEHAEYLSG 631
Y++E + G
Sbjct: 890 YYKEQKVLVEG 900
>MGI|MGI:107995 [details] [associations]
symbol:Upf1 "UPF1 regulator of nonsense transcripts homolog
(yeast)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=ISO]
[GO:0000785 "chromatin" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006260 "DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006449 "regulation of
translational termination" evidence=ISO] [GO:0007049 "cell cycle"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=ISO] [GO:0044530
"supraspliceosomal complex" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=ISO] InterPro:IPR018999 Pfam:PF09416 MGI:MGI:107995
GO:GO:0005524 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 GO:GO:0000785
GO:GO:0003682 GO:GO:0003723 GO:GO:0007049 GO:GO:0000932
eggNOG:COG1112 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GO:GO:0006449 GeneTree:ENSGT00550000074391
HOGENOM:HOG000205990 KO:K14326 OMA:MFYEGSL CTD:5976
HOVERGEN:HBG061556 ChiTaRS:UPF1 EMBL:AF322655 EMBL:AY597039
EMBL:AY597038 EMBL:AK148196 EMBL:BC030916 EMBL:BC052149
EMBL:BC056442 EMBL:AF182947 IPI:IPI00420949 IPI:IPI00850525
RefSeq:NP_001116301.1 RefSeq:NP_109605.2 UniGene:Mm.390048
ProteinModelPortal:Q9EPU0 SMR:Q9EPU0 STRING:Q9EPU0
PhosphoSite:Q9EPU0 PaxDb:Q9EPU0 PRIDE:Q9EPU0
Ensembl:ENSMUST00000075666 GeneID:19704 KEGG:mmu:19704
UCSC:uc009mab.2 UCSC:uc012gfa.1 InParanoid:Q9EPU0 OrthoDB:EOG4P8FH8
NextBio:297078 Bgee:Q9EPU0 Genevestigator:Q9EPU0
GermOnline:ENSMUSG00000058301 Uniprot:Q9EPU0
Length = 1124
Score = 432 (157.1 bits), Expect = 5.4e-38, P = 5.4e-38
Identities = 150/505 (29%), Positives = 235/505 (46%)
Query: 148 TYRRMKDALIQLSKGVQNGPAAGLI--PVLFGEQKPTVLKKDIAFKPFNS----NLDHSQ 201
++ RM+ AL + V +G I +L E + V+K + K F + +L+HSQ
Sbjct: 425 SFDRMQSALKTFA--VDETSVSGYIYHKLLGHEVEDVVIKCQLP-KRFTAQGLPDLNHSQ 481
Query: 202 KDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGS-KILACAASNIAVDNIXXXX 260
A+ K + + + ++ I+ ++G+ +L CA SNIAVD +
Sbjct: 482 VYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKI 540
Query: 261 XXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKLLKTKDK 318
RL + E A+D+ V +L + IR M L KL + KD+
Sbjct: 541 HQTGLKV------VRLCAKSRE-AIDSPV---SFLALHNQIRNMDSMPELQ-KLQQLKDE 589
Query: 319 NTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEA 378
E K R ++ A +++ NADV+ T GA +L F ++IDE+
Sbjct: 590 TGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDES 644
Query: 379 AQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS 437
QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L +
Sbjct: 645 TQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR- 703
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIAGCDMEE 491
L VQYRMH + + S Y ++ + R +P + EE
Sbjct: 704 -LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEE 762
Query: 492 KKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKILRSKDDK 547
S +N EA +L+++G IGIITPY Q V ++ S K
Sbjct: 763 IASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTK 822
Query: 548 L-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 606
L + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR +V +
Sbjct: 823 LYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNP 882
Query: 607 ETVSSDGFLKRLIEYFEEHAEYLSG 631
+ +S L+ Y++E + G
Sbjct: 883 KALSKQPLWNHLLSYYKEQKALVEG 907
>UNIPROTKB|E1BEK9 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0044530 "supraspliceosomal complex" evidence=IEA] [GO:0035145
"exon-exon junction complex" evidence=IEA] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] InterPro:IPR018999
Pfam:PF09416 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0007049 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145
GeneTree:ENSGT00550000074391 OMA:MFYEGSL EMBL:DAAA02019036
IPI:IPI00685259 Ensembl:ENSBTAT00000027868 Uniprot:E1BEK9
Length = 1127
Score = 432 (157.1 bits), Expect = 5.4e-38, P = 5.4e-38
Identities = 150/504 (29%), Positives = 233/504 (46%)
Query: 148 TYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKKDIAFKPFNS----NLDHSQK 202
++ RM+ AL + V +G I L G + V+ K K F + +L+HSQ
Sbjct: 428 SFDRMQSALKTFA--VDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQV 485
Query: 203 DAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGS-KILACAASNIAVDNIXXXXX 261
A+ K + + + ++ I+ ++G+ +L CA SNIAVD +
Sbjct: 486 YAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIH 544
Query: 262 XXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKLLKTKDKN 319
RL + E A+D+ V +L + IR M L KL + KD+
Sbjct: 545 QTGLKV------VRLCAKSRE-AIDSPV---SFLALHNQIRNMDSMPELQ-KLQQLKDET 593
Query: 320 TRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAA 379
E K R ++ A +++ NADV+ T GA +L F ++IDE+
Sbjct: 594 GELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDEST 648
Query: 380 QALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSM 438
QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L +
Sbjct: 649 QATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-- 706
Query: 439 LTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIAGCDMEEK 492
L VQYRMH + + S Y ++ + R +P + EE
Sbjct: 707 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 766
Query: 493 KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKILRSKDDKL 548
S +N EA +L+++G IGIITPY Q V ++ S KL
Sbjct: 767 ASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKL 826
Query: 549 -KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTE 607
+ +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR +V + +
Sbjct: 827 YQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPK 886
Query: 608 TVSSDGFLKRLIEYFEEHAEYLSG 631
+S L+ Y++E + G
Sbjct: 887 ALSKQPLWNHLLNYYKEQKVLVEG 910
>UNIPROTKB|E1C0J3 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0035145 "exon-exon
junction complex" evidence=IEA] [GO:0044530 "supraspliceosomal
complex" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AADN02071779 IPI:IPI00571950 Ensembl:ENSGALT00000005101
ArrayExpress:E1C0J3 Uniprot:E1C0J3
Length = 1128
Score = 432 (157.1 bits), Expect = 5.4e-38, P = 5.4e-38
Identities = 150/504 (29%), Positives = 233/504 (46%)
Query: 148 TYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKKDIAFKPFNS----NLDHSQK 202
++ RM+ AL + V +G I L G + V+ K K F + +L+HSQ
Sbjct: 429 SFDRMQSALKTFA--VDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQV 486
Query: 203 DAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGS-KILACAASNIAVDNIXXXXX 261
A+ K + + + ++ I+ ++G+ +L CA SNIAVD +
Sbjct: 487 YAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIH 545
Query: 262 XXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKLLKTKDKN 319
RL + E A+D+ V +L + IR M L KL + KD+
Sbjct: 546 QTGLKV------VRLCAKSRE-AIDSPV---SFLALHNQIRNMDSMPELQ-KLQQLKDET 594
Query: 320 TRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAA 379
E K R ++ A +++ NADV+ T GA +L F ++IDE+
Sbjct: 595 GELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDEST 649
Query: 380 QALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSM 438
QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L +
Sbjct: 650 QATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-- 707
Query: 439 LTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIAGCDMEEK 492
L VQYRMH + + S Y ++ + R +P + EE
Sbjct: 708 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 767
Query: 493 KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKILRSKDDKL 548
S +N EA +L+++G IGIITPY Q V ++ S KL
Sbjct: 768 ASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKL 827
Query: 549 -KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTE 607
+ +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR +V + +
Sbjct: 828 YQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPK 887
Query: 608 TVSSDGFLKRLIEYFEEHAEYLSG 631
+S L+ Y++E + G
Sbjct: 888 ALSKQPLWNHLLNYYKEQKVLVEG 911
>UNIPROTKB|Q92900 [details] [associations]
symbol:UPF1 "Regulator of nonsense transcripts 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay"
evidence=IDA;NAS;IMP;TAS] [GO:0006449 "regulation of translational
termination" evidence=IMP;NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0003723 "RNA binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=NAS] [GO:0071044 "histone mRNA catabolic
process" evidence=IMP] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0044530 "supraspliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006260 "DNA replication" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0007049 "cell cycle" evidence=IMP] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005524 GO:GO:0010467 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0003723 GO:GO:0007049
GO:GO:0006406 GO:GO:0000932 eggNOG:COG1112 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145 EMBL:AC003972
GO:GO:0044530 GO:GO:0006449 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL CTD:5976 EMBL:U65533 EMBL:U59323 EMBL:D86988
EMBL:AF074016 EMBL:BC039817 IPI:IPI00034049 IPI:IPI00399170
RefSeq:NP_002902.2 UniGene:Hs.515266 PDB:2GJK PDB:2GK6 PDB:2GK7
PDB:2IYK PDB:2WJV PDB:2WJY PDB:2XZO PDB:2XZP PDBsum:2GJK
PDBsum:2GK6 PDBsum:2GK7 PDBsum:2IYK PDBsum:2WJV PDBsum:2WJY
PDBsum:2XZO PDBsum:2XZP ProteinModelPortal:Q92900 SMR:Q92900
DIP:DIP-29875N IntAct:Q92900 MINT:MINT-5005507 STRING:Q92900
PhosphoSite:Q92900 DMDM:17380291 PaxDb:Q92900 PRIDE:Q92900
Ensembl:ENST00000262803 GeneID:5976 KEGG:hsa:5976 UCSC:uc002nkf.3
UCSC:uc002nkg.3 GeneCards:GC19P018942 HGNC:HGNC:9962 HPA:HPA019587
HPA:HPA020857 MIM:601430 neXtProt:NX_Q92900 PharmGKB:PA34328
HOVERGEN:HBG061556 InParanoid:Q92900 ChiTaRS:UPF1
EvolutionaryTrace:Q92900 GenomeRNAi:5976 NextBio:23259
ArrayExpress:Q92900 Bgee:Q92900 CleanEx:HS_UPF1
Genevestigator:Q92900 GermOnline:ENSG00000005007 Uniprot:Q92900
Length = 1129
Score = 432 (157.1 bits), Expect = 5.4e-38, P = 5.4e-38
Identities = 150/504 (29%), Positives = 233/504 (46%)
Query: 148 TYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKKDIAFKPFNS----NLDHSQK 202
++ RM+ AL + V +G I L G + V+ K K F + +L+HSQ
Sbjct: 430 SFDRMQSALKTFA--VDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQV 487
Query: 203 DAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGS-KILACAASNIAVDNIXXXXX 261
A+ K + + + ++ I+ ++G+ +L CA SNIAVD +
Sbjct: 488 YAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIH 546
Query: 262 XXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKLLKTKDKN 319
RL + E A+D+ V +L + IR M L KL + KD+
Sbjct: 547 QTGLKV------VRLCAKSRE-AIDSPV---SFLALHNQIRNMDSMPELQ-KLQQLKDET 595
Query: 320 TRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAA 379
E K R ++ A +++ NADV+ T GA +L F ++IDE+
Sbjct: 596 GELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDEST 650
Query: 380 QALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSM 438
QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L +
Sbjct: 651 QATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-- 708
Query: 439 LTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIAGCDMEEK 492
L VQYRMH + + S Y ++ + R +P + EE
Sbjct: 709 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 768
Query: 493 KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKILRSKDDKL 548
S +N EA +L+++G IGIITPY Q V ++ S KL
Sbjct: 769 ASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKL 828
Query: 549 -KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTE 607
+ +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR +V + +
Sbjct: 829 YQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPK 888
Query: 608 TVSSDGFLKRLIEYFEEHAEYLSG 631
+S L+ Y++E + G
Sbjct: 889 ALSKQPLWNHLLNYYKEQKVLVEG 912
>UNIPROTKB|E2RL81 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AAEX03012279 Ensembl:ENSCAFT00000023180 Uniprot:E2RL81
Length = 1130
Score = 432 (157.1 bits), Expect = 5.4e-38, P = 5.4e-38
Identities = 150/504 (29%), Positives = 233/504 (46%)
Query: 148 TYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKKDIAFKPFNS----NLDHSQK 202
++ RM+ AL + V +G I L G + V+ K K F + +L+HSQ
Sbjct: 431 SFDRMQSALKTFA--VDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQV 488
Query: 203 DAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGS-KILACAASNIAVDNIXXXXX 261
A+ K + + + ++ I+ ++G+ +L CA SNIAVD +
Sbjct: 489 YAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIH 547
Query: 262 XXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKLLKTKDKN 319
RL + E A+D+ V +L + IR M L KL + KD+
Sbjct: 548 QTGLKV------VRLCAKSRE-AIDSPV---SFLALHNQIRNMDSMPELQ-KLQQLKDET 596
Query: 320 TRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAA 379
E K R ++ A +++ NADV+ T GA +L F ++IDE+
Sbjct: 597 GELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDEST 651
Query: 380 QALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSM 438
QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L +
Sbjct: 652 QATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-- 709
Query: 439 LTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIAGCDMEEK 492
L VQYRMH + + S Y ++ + R +P + EE
Sbjct: 710 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 769
Query: 493 KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKILRSKDDKL 548
S +N EA +L+++G IGIITPY Q V ++ S KL
Sbjct: 770 ASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKL 829
Query: 549 -KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTE 607
+ +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR +V + +
Sbjct: 830 YQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPK 889
Query: 608 TVSSDGFLKRLIEYFEEHAEYLSG 631
+S L+ Y++E + G
Sbjct: 890 ALSKQPLWNHLLNYYKEQKVLVEG 913
>ASPGD|ASPL0000056713 [details] [associations]
symbol:AN0646 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001308 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
HOGENOM:HOG000205990 OMA:MFYEGSL ProteinModelPortal:C8VS08
EnsemblFungi:CADANIAT00002030 Uniprot:C8VS08
Length = 1077
Score = 430 (156.4 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 138/452 (30%), Positives = 219/452 (48%)
Query: 197 LDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ K++ + + ++ II K G ++L CA SN+AVD
Sbjct: 424 LNGSQINAV-KSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKLNGGQVLVCAPSNVAVDQ 482
Query: 256 IXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ +R + +ES + SL +R + N +L+K
Sbjct: 483 LCERIHRTGLKTVRVTAKSR---EDVESPVGFL-------SLHEQVR--LNDSNIELIKL 530
Query: 316 KDKNTRREIQKELRTLSKEERKR-QQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+++ EL LS ++ KR +QL A +++ NADV+ T GA +L F
Sbjct: 531 N------QLKSELGELSSQDEKRLKQLTRAAEREILNNADVICCTCVGAGDPRLAKLKFR 584
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL L
Sbjct: 585 TVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 644
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTE----PTL--LLIDI 484
+ L VQYRMH + + S Y ++ + R P L ++
Sbjct: 645 GCSPIR--LNVQYRMHPCLSEFPSNMFYEGSLQNGITSFDRLRREVDFPWPILDSPMMFW 702
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILRS 543
+ EE S +N EA R ++GV DIGIITPY Q ++ +++
Sbjct: 703 SNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVQPKDIGIITPYEGQRSYIVSSMQA 762
Query: 544 ----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 599
K + K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRA+
Sbjct: 763 TGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYG 822
Query: 600 CCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
++ + + +S L+++F+E + G
Sbjct: 823 LVILGNPKVLSKHPLWNCLLQHFKERHTLVEG 854
>SGD|S000004685 [details] [associations]
symbol:NAM7 "ATP-dependent RNA helicase of the SFI
superfamily" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IMP] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IGI;IMP] [GO:0008298 "intracellular mRNA localization"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0016567 "protein ubiquitination"
evidence=IMP;IDA;IPI] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005844 "polysome" evidence=TAS] [GO:0003676 "nucleic acid
binding" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;TAS]
[GO:0006449 "regulation of translational termination" evidence=TAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006452 "translational frameshifting" evidence=IMP] [GO:0008186
"RNA-dependent ATPase activity" evidence=TAS] InterPro:IPR003593
InterPro:IPR018999 Pfam:PF09416 SMART:SM00382 SGD:S000004685
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003676 GO:GO:0016567
GO:GO:0030466 EMBL:BK006946 EMBL:Z49259 GO:GO:0005844 GO:GO:0008298
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0004004
GO:GO:0070478 GO:GO:0006449 GeneTree:ENSGT00550000074391
EMBL:X62394 EMBL:M76659 PIR:S23408 RefSeq:NP_013797.1 PDB:2XZL
PDBsum:2XZL ProteinModelPortal:P30771 SMR:P30771 DIP:DIP-2373N
IntAct:P30771 MINT:MINT-492322 STRING:P30771 PaxDb:P30771
PeptideAtlas:P30771 EnsemblFungi:YMR080C GeneID:855104
KEGG:sce:YMR080C CYGD:YMR080c HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL OrthoDB:EOG405W86 EvolutionaryTrace:P30771
NextBio:978431 Genevestigator:P30771 GermOnline:YMR080C
Uniprot:P30771
Length = 971
Score = 431 (156.8 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
Identities = 159/549 (28%), Positives = 263/549 (47%)
Query: 110 GQGVVYRLKDS---SITVAFDDI---PEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGV 163
G+G + RL +S + T+ P L + E + +Y RM+DAL + + +
Sbjct: 313 GRGYIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFA--I 370
Query: 164 QNGPAAG-LIPVLFGEQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFML 217
+G L + G Q + L K+ + F + L+ SQ +A+S L + + ++
Sbjct: 371 DKKSISGYLYYKILGHQVVDISFDVPLPKEFSIPNF-AQLNSSQSNAVSHVLQ-RPLSLI 428
Query: 218 HXXXXXXXXXXVVEII--LQEVKRGSKILACAASNIAVDNIXXXXXXXXXXXXXXGHPAR 275
I+ L ++ + +IL CA SN+AVD++ +R
Sbjct: 429 QGPPGTGKTVTSATIVYHLSKIHK-DRILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSR 487
Query: 276 LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEE 335
+ +ES++ L ++ + + E+K LLK KD+ R + K
Sbjct: 488 ---EDVESSVSNLAL---HNLVGRGAKGELK----NLLKLKDEVGELSASDTKRFV-KLV 536
Query: 336 RKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR 395
RK + +++ ADVV T GA ++LD T F V+IDE+ QA E C I ++KG++
Sbjct: 537 RKTE----AEILNKADVVCCTCVGAGDKRLD-TKFRTVLIDESTQASEPECLIPIVKGAK 591
Query: 396 -CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSS 454
IL GDH QL P + +A GL ++LFERL L G V L VQYRM+ ++ + S
Sbjct: 592 QVILVGDHQQLGPVILERKAADAGLKQSLFERLISL-G-HVPIRLEVQYRMNPYLSEFPS 649
Query: 455 KQLYNSKIKAHPSGVKRT--SSTEPTLL----LIDIAGCDMEEKKDEEDSTMNEGEAEVA 508
Y ++ + +RT +S P + ++ A EE S +N EA
Sbjct: 650 NMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNC 709
Query: 509 MAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILR---SKDDKLK-NMEVSTVDGFQGRE 563
+L + GV IG+ITPY Q +L+ ++ S D L +EV++VD FQGRE
Sbjct: 710 ERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGRE 769
Query: 564 KEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFE 623
K+ II+S VR+N ++ +GFL D RR+NV +TRA+ ++ + +++ + L+ +F
Sbjct: 770 KDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFR 829
Query: 624 EHAEYLSGS 632
E + G+
Sbjct: 830 EKGCLVEGT 838
Score = 37 (18.1 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 118 KDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQL 159
KD++I D PEE P L + + Y+R LI+L
Sbjct: 209 KDATINDI--DAPEEQEAIPPLLLRYQDAYEYQRSYGPLIKL 248
>POMBASE|SPAC6G9.10c [details] [associations]
symbol:sen1 "ATP-dependent 5' to 3' DNA/RNA helicase
Sen1" species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0006369
"termination of RNA polymerase II transcription" evidence=ISO]
[GO:0008033 "tRNA processing" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0016180 "snRNA
processing" evidence=ISO] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0035649 "Nrd1 complex"
evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0043144 "snoRNA processing"
evidence=ISO] InterPro:IPR024714 PomBase:SPAC6G9.10c GO:GO:0005524
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006397
GO:GO:0008033 eggNOG:COG1112 GO:GO:0006364 GO:GO:0006369
GO:GO:0043144 GO:GO:0043141 GO:GO:0016180 KO:K10706 GO:GO:0035649
PIR:T39072 RefSeq:NP_594119.1 ProteinModelPortal:Q92355
EnsemblFungi:SPAC6G9.10c.1 GeneID:2541556 KEGG:spo:SPAC6G9.10c
OrthoDB:EOG4BCHWF NextBio:20802652 GO:GO:0032575 InterPro:IPR024481
PANTHER:PTHR10887:SF164 Pfam:PF12726 Uniprot:Q92355
Length = 1687
Score = 429 (156.1 bits), Expect = 2.2e-37, Sum P(3) = 2.2e-37
Identities = 119/344 (34%), Positives = 192/344 (55%)
Query: 297 LASDIRKEMKALNGKLL-KTKDKNTRREIQKELRTLSKEERKRQQL----AVTDVIKNAD 351
+A D+ ++ K+L +L K +KN + +EL++ S + K L A ++K AD
Sbjct: 1292 VARDVAEDTKSLGKELQNKINEKNLAEQKVEELQSQSFTKNKEVDLLRKKAQKAILKQAD 1351
Query: 352 VVLTTLTGAVSRKLDNTS--FDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPT 408
VV TL+G+ + ++S F VIIDEAAQA+E+ I L G++ CIL GD QLPPT
Sbjct: 1352 VVCATLSGSGHDLVAHSSLNFSTVIIDEAAQAVELDTIIPLRYGAKKCILVGDPNQLPPT 1411
Query: 409 VQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSG 468
V S +A ++LF R+ + +++ +L++QYRMH I ++ SK+ Y+S+++ +
Sbjct: 1412 VLSKKAASLNYSQSLFVRIQKNFSNQMC-LLSIQYRMHPDISHFPSKKFYDSRLEDGDNM 1470
Query: 469 VKRTSST---EPTLL---LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQS--GV 520
++T P L D+ G +E+ ST N E E + L+ V
Sbjct: 1471 AEKTQQVWHVNPKFTQYRLFDVRG---KERTSNTMSTYNLEEVEYLVNMVDELLNKFPDV 1527
Query: 521 HASD-IGIITPYAAQV-VLLKILRSKDDK--LKNMEVSTVDGFQGREKEAIIISMVRSNS 576
+ + IG+ITPY +Q+ L + + K K + +++ TVDGFQG+EK+ I S V+S S
Sbjct: 1528 NFTGRIGVITPYRSQLHELRRAFKVKYGKSFMSTIDIQTVDGFQGQEKDIIFFSCVKSYS 1587
Query: 577 KKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
K +GFL D RR+NVA+TRAR ++ + ET+ +D L++
Sbjct: 1588 KHGIGFLRDFRRLNVALTRARSSLLIIGNMETLKTDDLWGSLVD 1631
Score = 46 (21.3 bits), Expect = 2.2e-37, Sum P(3) = 2.2e-37
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 242 KILACAASNIAVDNI 256
+IL CA SN AVD +
Sbjct: 1193 QILLCAPSNAAVDEV 1207
Score = 38 (18.4 bits), Expect = 2.2e-37, Sum P(3) = 2.2e-37
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 73 LLEFQSTKGDVLPAHKFGTHDVVVLKP 99
+L+F G ++ + K H + VL+P
Sbjct: 937 VLKFHKLDGKIIDSFKTVEHYMEVLQP 963
>FB|FBgn0030354 [details] [associations]
symbol:Upf1 "Upf1" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS;IMP;NAS] [GO:0005737 "cytoplasm"
evidence=IEA;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0035195 "gene silencing by miRNA" evidence=IMP] [GO:0071456
"cellular response to hypoxia" evidence=IMP] [GO:0035145 "exon-exon
junction complex" evidence=IDA] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 EMBL:AE014298 GO:GO:0008270 GO:GO:0071456
GO:GO:0004386 eggNOG:COG1112 GeneTree:ENSGT00550000074391 KO:K14326
OMA:MFYEGSL EMBL:AY061379 RefSeq:NP_572767.1 UniGene:Dm.3617
ProteinModelPortal:Q9VYS3 SMR:Q9VYS3 STRING:Q9VYS3 PaxDb:Q9VYS3
PRIDE:Q9VYS3 EnsemblMetazoa:FBtr0073596 GeneID:32153
KEGG:dme:Dmel_CG1559 UCSC:CG1559-RA CTD:5976 FlyBase:FBgn0030354
InParanoid:Q9VYS3 OrthoDB:EOG476HF1 PhylomeDB:Q9VYS3
GenomeRNAi:32153 NextBio:777131 Bgee:Q9VYS3 GermOnline:CG1559
Uniprot:Q9VYS3
Length = 1180
Score = 419 (152.6 bits), Expect = 2.4e-36, P = 2.4e-36
Identities = 130/453 (28%), Positives = 215/453 (47%)
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVK-RGSKILACAASN 250
P +L+ SQ A+ AL + + ++ I+ Q VK G +L CA SN
Sbjct: 447 PHLPDLNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPSN 505
Query: 251 IAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG 310
AVD + +R + ++S + L ++ ++ E+K
Sbjct: 506 TAVDQLTEKIHRTNLKVVRVCAKSR---EAIDSPVSFLALHNQIRNMETN--SELK---- 556
Query: 311 KLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
KL + KD+ E K R ++ A +++ ADV+ T GA +L F
Sbjct: 557 KLQQLKDETGELSSADE-----KRYRNLKRAAENQLLEAADVICCTCVGAGDGRLSRVKF 611
Query: 371 DLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
++IDE+ Q+ E C + ++ G++ IL GDH QL P V +A + GL ++LFERL
Sbjct: 612 TSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV 671
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK----AHPSGVKRTSS-TEPTLLLIDI 484
L G L VQYRMH + + S Y ++ A +K +P + +
Sbjct: 672 L-GIR-PFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL 729
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILR- 542
EE S +N EA R +++G+ IGIITPY Q L++ ++
Sbjct: 730 VTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQY 789
Query: 543 --SKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 599
S +L + +E+++VD FQGREK+ II+S VRSN ++ +GFL+D RR+NVA+TRA+
Sbjct: 790 QGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKFG 849
Query: 600 CCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
+V + + ++ L+ ++++ + GS
Sbjct: 850 IIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGS 882
>CGD|CAL0003335 [details] [associations]
symbol:SEN1 species:5476 "Candida albicans" [GO:0035649 "Nrd1
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0016180 "snRNA processing" evidence=IEA] [GO:0031126 "snoRNA
3'-end processing" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
InterPro:IPR014016 InterPro:IPR024714 PROSITE:PS51198
CGD:CAL0003335 GO:GO:0005524 GO:GO:0005634 GO:GO:0008033
GO:GO:0004386 eggNOG:COG1112 EMBL:AACQ01000003 EMBL:AACQ01000004
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_723003.1 RefSeq:XP_723150.1 ProteinModelPortal:Q5ANG6
STRING:Q5ANG6 GeneID:3635255 GeneID:3635333 KEGG:cal:CaO19.13359
KEGG:cal:CaO19.5938 Uniprot:Q5ANG6
Length = 2018
Score = 423 (154.0 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 121/336 (36%), Positives = 184/336 (54%)
Query: 299 SDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLT 358
+++ ++++A+N K + K + + + +KE +R A ++ A V+ +TL+
Sbjct: 1464 TELEEKIRAINKKRSELAKKLDEQREKASIANRTKEINRRNIQA--RILSEAQVLCSTLS 1521
Query: 359 GAVSRKLDNTS--FDLVIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAE 415
G+ + N S FD VIIDEA Q LE++ I L G +CI+ GD QLPPTV S A
Sbjct: 1522 GSAHDLVANLSVQFDQVIIDEACQCLELSAIIPLRYGCKKCIMVGDPNQLPPTVLSQAAA 1581
Query: 416 KKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK---RT 472
++LF R+ + D V ML VQYRMH I + S + YNSK+K ++ R
Sbjct: 1582 SYNYEQSLFVRMQKNHPDSVY-MLDVQYRMHPMISKFPSSEFYNSKLKDGDGMLELNTRP 1640
Query: 473 SSTEPTLL---LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQ---SGVHASDIG 526
+P L DI G EK + S N EA VA+ +L+Q + IG
Sbjct: 1641 WHKDPPLTPYRFFDILG--KHEKNELTRSLFNTDEAIVALQLTDKLMQLLPQDKFSGKIG 1698
Query: 527 IITPYAAQVVLLK-ILRSKDDK--LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFL 583
II+PY Q+ +K + K K L ++ +TVDGFQG+EKE II+S VR+++ VGFL
Sbjct: 1699 IISPYKEQIRKIKEVFVRKYGKPILDEIDFNTVDGFQGQEKEIIIMSCVRASATGNVGFL 1758
Query: 584 SDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLI 619
SD RRMNVA+TRA+ ++ + +++S + K+L+
Sbjct: 1759 SDVRRMNVALTRAKTTLWILGNKDSLSRNEVWKKLL 1794
Score = 40 (19.1 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 25/90 (27%), Positives = 42/90 (46%)
Query: 9 KQSAVSLQEFVSVMAPLIDLEK-EAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTG 67
K + ++++V V PL+ LE +A SA +T +K +L + ++T
Sbjct: 1105 KDTYKDVKDYVQVTEPLLMLECWQAMQSAKLT---------VDEKPFELL----IGSRTS 1151
Query: 68 LMGKTLLEFQSTKGDVLPAHKFGTHDVVVL 97
+ G + F S + VL K G D+VVL
Sbjct: 1152 VDGFFDV-FASMEKTVLQDRKIGDSDLVVL 1180
Score = 39 (18.8 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 282 ESALDAQVLRGDNSSLASDIRKEMKA 307
+S L L+ ++ ASDIR+ +KA
Sbjct: 1174 DSDLVVLALKDESLQHASDIRRYIKA 1199
>TAIR|locus:2130384 [details] [associations]
symbol:MAA3 "MAGATAMA 3" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009553 "embryo sac development"
evidence=IMP] [GO:0009875 "pollen-pistil interaction" evidence=IMP]
[GO:0010183 "pollen tube guidance" evidence=IMP] PROSITE:PS51198
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0004386 GO:GO:0009553 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:Z97339 GO:GO:0010183 EMBL:AL161542 EMBL:EU915246
IPI:IPI00522212 PIR:E71420 RefSeq:NP_193292.3 UniGene:At.33168
ProteinModelPortal:B6SFA4 SMR:B6SFA4 PaxDb:B6SFA4 PRIDE:B6SFA4
EnsemblPlants:AT4G15570.1 GeneID:827233 KEGG:ath:AT4G15570
GeneFarm:2417 TAIR:At4g15570 HOGENOM:HOG000030627 KO:K10706
OMA:TIMREFT PhylomeDB:B6SFA4 ProtClustDB:CLSN2680970
Genevestigator:B6SFA4 GO:GO:0009875 InterPro:IPR026852
PANTHER:PTHR10887:SF27 Uniprot:B6SFA4
Length = 818
Score = 381 (139.2 bits), Expect = 5.2e-35, Sum P(3) = 5.2e-35
Identities = 116/312 (37%), Positives = 163/312 (52%)
Query: 344 TDVIKNADVVLTTLTGAVSRKL--DNTSFDLVIIDEAAQALEIACWIALLKGSRC---IL 398
T +++ A +V TL+ + S L N FD+VIIDEAAQA+E A I L +RC L
Sbjct: 456 TAILEEAAIVFATLSFSGSALLAKSNRGFDVVIIDEAAQAVEPATLIPL--ATRCKQVFL 513
Query: 399 AGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLY 458
GD QLP TV S A+ G G ++FERL G V ML QYRMH I ++ SKQ Y
Sbjct: 514 VGDPKQLPATVISTVAQDSGYGTSMFERLQKA-GYPV-KMLKTQYRMHPEIRSFPSKQFY 571
Query: 459 NSKIKAHPSGVKRTSSTEPTLLLIDIAGC--DMEEKKDEED-----STMNEGEAEVAMAH 511
++ S ++ ++ + C D+ E K+ + S +N E E +
Sbjct: 572 EGALE-DGSDIEAQTTRDWHKYRCFGPFCFFDIHEGKESQHPGATGSRVNLDEVEFVLLI 630
Query: 512 AKRLIQSGVH---ASDIGIITPYAAQVVLLKILRSKD----DKLKNMEVSTVDGFQGREK 564
RL+ +S + II+PY QV K R K+ + K ++++TVDGFQGREK
Sbjct: 631 YHRLVTMYPELKSSSQLAIISPYNYQVKTFKD-RFKEMFGTEAEKVVDINTVDGFQGREK 689
Query: 565 EAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+ I S VR+N ++GFLS+ RRMNV +TRA+ +V T+ SD K LIE E+
Sbjct: 690 DVAIFSCVRANENGQIGFLSNSRRMNVGITRAKSSVLVVGSAATLKSDPLWKNLIESAEQ 749
Query: 625 HAEYLSGSEYLN 636
S+ LN
Sbjct: 750 RNRLFKVSKPLN 761
Score = 60 (26.2 bits), Expect = 5.2e-35, Sum P(3) = 5.2e-35
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 193 FNSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEII 233
FN NL+ SQK+AI LS K+ ++ ++ I+
Sbjct: 254 FNENLNKSQKEAIDVGLSRKSFVLIQGPPGTGKTQTILSIL 294
Score = 47 (21.6 bits), Expect = 5.2e-35, Sum P(3) = 5.2e-35
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 231 EIILQEVKRGSKILACAASNIAVDNI 256
E++ K ++L CA SN A+D I
Sbjct: 365 EVVNASRKYRLRVLVCAPSNSALDEI 390
>POMBASE|SPAC16C9.06c [details] [associations]
symbol:upf1 "ATP-dependent RNA helicase Upf1"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0002184 "cytoplasmic translational
termination" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006415
"translational termination" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 PomBase:SPAC16C9.06c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0004004 GO:GO:0002184 HOGENOM:HOG000205990
KO:K14326 OMA:MFYEGSL OrthoDB:EOG405W86 PIR:S62476
RefSeq:NP_593080.1 ProteinModelPortal:Q09820 SMR:Q09820
STRING:Q09820 PRIDE:Q09820 EnsemblFungi:SPAC16C9.06c.1
GeneID:2542327 KEGG:spo:SPAC16C9.06c NextBio:20803388
Uniprot:Q09820
Length = 925
Score = 390 (142.3 bits), Expect = 3.5e-33, P = 3.5e-33
Identities = 133/472 (28%), Positives = 222/472 (47%)
Query: 180 KPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEII-----L 234
KP L D++ P L+ SQ +A+ +A+ SK + ++ ++ +
Sbjct: 378 KPK-LPSDLSV-PNLPKLNASQSEAV-RAVLSKPLSLIQGPPGTGKTVTSASVVYHLATM 434
Query: 235 QEVKRGSK--ILACAASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRG 292
Q KR S +L CA SN+AVD + +R + +ES++ L
Sbjct: 435 QSRKRKSHSPVLVCAPSNVAVDQLAEKIHRTGLRVVRVAAKSR---EDIESSVSFLSLHE 491
Query: 293 DNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADV 352
+ E++ +LLK + +N IQ E K+ R A ++++ A V
Sbjct: 492 QIKNYK--FNPELQ----RLLKLRSENNELSIQDE-----KKLRILVAAAEKELLRAAHV 540
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS 411
+ T GA R++ F V+IDEA QA E C I L+ G++ +L GDH QL P V +
Sbjct: 541 ICCTCVGAGDRRISKYKFRSVLIDEATQASEPECMIPLVLGAKQVVLVGDHQQLGPVVMN 600
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
+ L ++LFERL L G+ L VQYRMH + + S Y ++ + +R
Sbjct: 601 KKVALASLSQSLFERLIIL-GNS-PFRLVVQYRMHPCLSEFPSNTFYEGTLQNGVTTSER 658
Query: 472 TSS------TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDI 525
+ +P L+ A EE S +N EA ++S V I
Sbjct: 659 IARHVDFPWIQPDSPLMFYANFGQEELSASGTSFLNRTEASTCEKIVTTFLRSNVLPEQI 718
Query: 526 GIITPYAAQ-VVLLKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEV 580
GI+TPY Q +++ +++ + D K +EV++VD FQGREK+ II+S VRS+ + +
Sbjct: 719 GIVTPYDGQRSYIVQYMQNNGSMQKDLYKAVEVASVDAFQGREKDFIILSCVRSSEHQGI 778
Query: 581 GFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
GF++D RR+NVA+TRA+ ++ + + ++ + + +E + G+
Sbjct: 779 GFVNDPRRLNVALTRAKYGVIVLGNPKVLAKHALWYHFVLHCKEKGYLVEGT 830
>POMBASE|SPBC29A10.10c [details] [associations]
symbol:SPBC29A10.10c "tRNA-splicing endonuclease
positive effector (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=ISO] [GO:0016180 "snRNA processing" evidence=ISO]
[GO:0035649 "Nrd1 complex" evidence=ISO] [GO:0043144 "snoRNA
processing" evidence=ISO] InterPro:IPR024714 PomBase:SPBC29A10.10c
GO:GO:0005524 GO:GO:0005634 EMBL:CU329671 GO:GO:0008033
eggNOG:COG1112 GO:GO:0006364 GO:GO:0004004 GO:GO:0006369
GO:GO:0043144 GO:GO:0016180 KO:K10706 GO:GO:0035649
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
OrthoDB:EOG4MPMZ6 PIR:T40065 RefSeq:NP_596055.1
ProteinModelPortal:O94387 EnsemblFungi:SPBC29A10.10c.1
GeneID:2540523 KEGG:spo:SPBC29A10.10c NextBio:20801650
Uniprot:O94387
Length = 1944
Score = 393 (143.4 bits), Expect = 5.7e-33, P = 5.7e-33
Identities = 118/361 (32%), Positives = 188/361 (52%)
Query: 292 GDNSSLASDIRKEMKALNGKLLKTKD--KNTRREIQKELRTLSKEERKRQQLAVTDVIKN 349
G NSS+ +E+ L ++ D + +R + L L K+ + + +++
Sbjct: 1435 GKNSSILEAQLREITKQKNMLEQSLDDMRERQRSTNRNLDVLKKQIQNQ-------LLQE 1487
Query: 350 ADVVLTTLTGAVSRKLDNT--SFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLP 406
AD+V TL+ + L N +F VIIDEAAQA+E++ I L G C++ GD QLP
Sbjct: 1488 ADIVCATLSASGHELLLNAGLTFRTVIIDEAAQAVELSSIIPLKYGCESCVMVGDPNQLP 1547
Query: 407 PTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHP 466
PTV S + K G ++L+ R+ + +E +L++QYRM+ I + SK YNSK+ P
Sbjct: 1548 PTVLSKTSAKFGYSQSLYVRMFKQH-NESACLLSIQYRMNPEISRFPSKFFYNSKLLDGP 1606
Query: 467 --SGV-KRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHAS 523
S V R +P L + E S N EA + +RLIQ ++
Sbjct: 1607 NMSAVTSRPWHEDPQLGIYRFFNVHGTEAFSNSKSLYNVEEASFILLLYERLIQCYLNID 1666
Query: 524 ---DIGIITPYAAQVVLLKI-LRSKDDKL--KNMEVSTVDGFQGREKEAIIISMVRSNSK 577
IG++TPY +QV L+ + K + K++++ TVDGFQG+EK+ II S VRS+
Sbjct: 1667 FEGKIGVVTPYRSQVQQLRSQFQRKYGSIIFKHLDIHTVDGFQGQEKDIIIFSCVRSSMS 1726
Query: 578 KEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEY--LSGSEYL 635
+GFL D RR+NVA+TRA+ +V +++ + + LIE + + LS +++
Sbjct: 1727 GGIGFLQDLRRLNVALTRAKSSLYIVGNSKPLMQEDIFYSLIEDAKTRGVWRDLSANQFK 1786
Query: 636 N 636
N
Sbjct: 1787 N 1787
>UNIPROTKB|Q5ZKG3 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0032508 "DNA
duplex unwinding" evidence=ISS] [GO:0000076 "DNA replication
checkpoint" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0004518
"nuclease activity" evidence=ISS] [GO:0043139 "5'-3' DNA helicase
activity" evidence=ISS] [GO:0043142 "single-stranded DNA-dependent
ATPase activity" evidence=ISS] [GO:0017108 "5'-flap endonuclease
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0006264 "mitochondrial DNA
replication" evidence=ISS] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISS] [GO:0005760
"gamma DNA polymerase complex" evidence=ISS] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AJ720121 EMBL:AADN02028013 IPI:IPI00596013
RefSeq:NP_001006497.1 UniGene:Gga.42409 STRING:Q5ZKG3 GeneID:423688
KEGG:gga:423688 CTD:1763 HOGENOM:HOG000168456 HOVERGEN:HBG081456
KO:K10742 NextBio:20826122 Uniprot:Q5ZKG3
Length = 992
Score = 374 (136.7 bits), Expect = 5.7e-32, Sum P(2) = 5.7e-32
Identities = 97/311 (31%), Positives = 169/311 (54%)
Query: 322 REIQKELRTLSKEE--RKRQQLAVTDV--IKNADVVLTTLTGAVSRKLD-NTSFDLVIID 376
+++ ++R ++EE R + +VTD+ + N+ V+ T ++ + FD I+D
Sbjct: 672 QKVHPDIRKFTEEEICRSKSIKSVTDLEELYNSQPVVATACMGINHPIFVQKQFDFCIVD 731
Query: 377 EAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT 436
EA+Q + C L R +L GDH QLPP VQ+ EA G+ +LF+RL
Sbjct: 732 EASQISQPICLGPLFCSKRFVLVGDHQQLPPLVQNSEARDLGMSESLFKRLEQ--NQNAV 789
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEE 496
LTVQYRM+ IM+ S+K +Y K++ V ++ P L ++ + D + +E
Sbjct: 790 VQLTVQYRMNSKIMSLSNKLVYEGKLECGSEKVSNATANLPNLKMLKLEFADASKTWLKE 849
Query: 497 DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTV 556
+ E + V + ++ +G SDIGII+PY Q+ ++ L ++ K +EV+T+
Sbjct: 850 ---VLEPDKPVCFLNTEK---AGCRPSDIGIISPYRHQLKVITDLMARL-KENRVEVNTI 902
Query: 557 DGFQGREKEAIIISMVRSNSKKEVG-FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFL 615
D +QGR+K II+S VR+++ + +G L D RR+NVA+TRA+ + +V ++ L
Sbjct: 903 DKYQGRDKSIIIVSFVRNSNDENLGALLKDWRRLNVAITRAKHKLIMVGCVPSLRRYPPL 962
Query: 616 KRLIEYFEEHA 626
++L+ + + A
Sbjct: 963 EKLLCHLQSEA 973
Score = 52 (23.4 bits), Expect = 5.7e-32, Sum P(2) = 5.7e-32
Identities = 51/266 (19%), Positives = 101/266 (37%)
Query: 50 QKKGSTILNLKCVD-AQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPA 108
+K G + N+ VD Q G+ L FQ G V A+ VVV LG
Sbjct: 442 EKAGDCVGNMIRVDQVQEVSEGQYLHSFQRKNGAVPGANLLVGDRVVVSGEENGLLG--- 498
Query: 109 LGQGVVYRLKDSSITVAFD-DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGP 167
L G V + + I+ ++ + ++ RL+ + + + LSK +++ P
Sbjct: 499 LATGYVREISATKISCLLGRNLSKLPESTTFRLDHEEGDCS---IGVPFENLSKLMKDSP 555
Query: 168 AAG-LIPVLFGEQKP-------TVLKKDI--AFKPFNSNLDHSQKDAISKALSSKNVFML 217
+ L ++ KP +VL + A L+ QK A+ + L S++ ++
Sbjct: 556 VSEKLRNLIIDFHKPRFIQHLSSVLPPEAKEAVASILKGLNKPQKQAMKQVLLSRDYTLI 615
Query: 218 HXXXXXXXXXXVVEIILQEVKRGSKILACAASNIAVDNIXXXXXXXXXXXXXXGHPARLL 277
+ ++ G +L + ++ AVDNI G ++
Sbjct: 616 VGMPGTGKTTTICALVRILSACGFSVLLTSFTHTAVDNILLKLAKFKVGFLRLGRAQKVH 675
Query: 278 PQVLESALDAQVLRGDNSSLASDIRK 303
P + + + ++ R + +D+ +
Sbjct: 676 PDIRKFT-EEEICRSKSIKSVTDLEE 700
>DICTYBASE|DDB_G0268924 [details] [associations]
symbol:DDB_G0268924 "Helicase SEN1" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268924
GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112
ProtClustDB:CLSZ2429765 RefSeq:XP_646844.2
ProteinModelPortal:Q55F26 EnsemblProtists:DDB0202279 GeneID:8616527
KEGG:ddi:DDB_G0268924 InParanoid:Q55F26 Uniprot:Q55F26
Length = 1772
Score = 372 (136.0 bits), Expect = 7.0e-32, Sum P(3) = 7.0e-32
Identities = 108/323 (33%), Positives = 174/323 (53%)
Query: 302 RKEMKALNGK-LLKTKDKNTRRE-IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
+K++ L+GK L + ++E I + ++S + +++ + D I A +V +TL+G
Sbjct: 1310 KKKLIGLDGKPYLPNMVRIGKKENISPDCHSISIFNKTQREKS--DSIYRASIVFSTLSG 1367
Query: 360 AVSRKLDNT-SFDLVIIDEAAQALEIACWIALLKGS--RCILAGDHLQLPPTVQSVEAEK 416
+ S + N D++++DE+ Q+ E + I L G+ + IL GD LQLPPT+ S E+ +
Sbjct: 1368 SGSETVKNNFRADIILVDESTQSTEPSSIIPLCIGNIEKLILVGDPLQLPPTIFSTESAE 1427
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHP---SGVKRTS 473
GL +LFERL+ + E ML VQYRMH I + S Q Y ++ S V
Sbjct: 1428 NGLNISLFERLSKVLPVE---MLHVQYRMHPTISRFPSNQFYRDRLLDGDNVKSLVYNQH 1484
Query: 474 STEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHA--KRLIQSGVHAS--DIGIIT 529
+ + I D+ + K+E + + E+ M K+L+Q GIIT
Sbjct: 1485 NFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKLVQDYPECKKFSFGIIT 1544
Query: 530 PYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRM 589
PY Q +K + + N+E ST+DGFQG EK+ II+S VRS + +GFLSDRRR+
Sbjct: 1545 PYKLQKSEIKEQHKQFNYPLNIETSTIDGFQGSEKDIIILSCVRS---ERIGFLSDRRRI 1601
Query: 590 NVAVTRARRQCCLVCDTETVSSD 612
NVA+TRA+ ++ +++ + D
Sbjct: 1602 NVALTRAKFGLFVIGNSKLLKKD 1624
Score = 59 (25.8 bits), Expect = 7.0e-32, Sum P(3) = 7.0e-32
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 197 LDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEI--ILQEVKRGSKILACAASNIAVD 254
L+ SQ ++I +LS+K + ++ + + IL + KIL C S+ +VD
Sbjct: 1243 LNTSQFNSIETSLSTKGITLIQGPPGTGKTTTIYYLLSILLAINPEFKILVCGPSHASVD 1302
Query: 255 NI 256
I
Sbjct: 1303 EI 1304
Score = 46 (21.3 bits), Expect = 7.0e-32, Sum P(3) = 7.0e-32
Identities = 17/77 (22%), Positives = 37/77 (48%)
Query: 9 KQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTI-LN-LKCVDAQT 66
K S + +E++ +M PLI E +++ + ++K G+ I L+ +K +D T
Sbjct: 1022 KSSYSNHEEYMDLMKPLIVEEYRKQLAGEFDE--IEGVSISEKDGTLIGLDKIKMIDGPT 1079
Query: 67 GLMGKTLLEFQSTKGDV 83
K + ++ K ++
Sbjct: 1080 IHSFKEISDYSIMKFEI 1096
>SGD|S000001207 [details] [associations]
symbol:DNA2 "Tripartite DNA replication factor" species:4932
"Saccharomyces cerevisiae" [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000784
"nuclear chromosome, telomeric region" evidence=IDA] [GO:0000723
"telomere maintenance" evidence=IMP] [GO:0006261 "DNA-dependent DNA
replication" evidence=IMP;IDA] [GO:0006273 "lagging strand
elongation" evidence=IGI;IMP] [GO:0006281 "DNA repair"
evidence=IEA;IGI;IMP] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA;IDA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=IDA]
[GO:0000706 "meiotic DNA double-strand break processing"
evidence=IGI] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
SGD:S000001207 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 EMBL:BK006934
GO:GO:0001302 GO:GO:0051539 GO:GO:0004003 eggNOG:COG1112
GO:GO:0000784 EMBL:U00027 GO:GO:0000723 GO:GO:0000706 GO:GO:0000733
GO:GO:0017108 GO:GO:0000014 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OrthoDB:EOG47H8Z4 PIR:S48904
RefSeq:NP_012034.1 ProteinModelPortal:P38859 SMR:P38859
DIP:DIP-2324N IntAct:P38859 MINT:MINT-620090 STRING:P38859
EnsemblFungi:YHR164C GeneID:856569 KEGG:sce:YHR164C CYGD:YHR164c
HOGENOM:HOG000112234 OMA:GLARYNI NextBio:982411
Genevestigator:P38859 GermOnline:YHR164C GO:GO:0035861
GO:GO:0006273 Uniprot:P38859
Length = 1522
Score = 242 (90.2 bits), Expect = 1.5e-31, Sum P(3) = 1.5e-31
Identities = 57/152 (37%), Positives = 91/152 (59%)
Query: 476 EPT--LLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAA 533
EPT ++ ++ C ++ E+D+ N GEAE+ + + ++ SGV DIG++T Y A
Sbjct: 1310 EPTRKVVFLNYDNCPDIIEQSEKDNITNHGEAELTLQCVEGMLLSGVPCEDIGVMTLYRA 1369
Query: 534 QVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVG-FLSDRRRMNVA 592
Q+ LLK + +K+ +E+ T D FQGR+K+ IIISMVR NS+ G L + RR+NVA
Sbjct: 1370 QLRLLKKIFNKN-VYDGLEILTADQFQGRDKKCIIISMVRRNSQLNGGALLKELRRVNVA 1428
Query: 593 VTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+TRA+ + ++ T+ S +K + EE
Sbjct: 1429 MTRAKSKLIIIGSKSTIGSVPEIKSFVNLLEE 1460
Score = 171 (65.3 bits), Expect = 1.5e-31, Sum P(3) = 1.5e-31
Identities = 45/120 (37%), Positives = 69/120 (57%)
Query: 347 IKNADVVLTTLTGA--VSRKLDNTSFDLVIIDEAAQ-ALEIACWIALLKGSRCILAGDHL 403
I + VV TT G + L+ FD VI+DEA+Q ++ +A L G+R I+ GDH
Sbjct: 1155 INSTSVVATTCLGINDILFTLNEKDFDYVILDEASQISMPVALG-PLRYGNRFIMVGDHY 1213
Query: 404 QLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK 463
QLPP V++ A GL +LF+ + + + V LT+QYRM I+ S+ +Y++K+K
Sbjct: 1214 QLPPLVKNDAARLGGLEESLFKTFCEKHPESVAE-LTLQYRMCGDIVTLSNFLIYDNKLK 1272
Score = 72 (30.4 bits), Expect = 1.5e-31, Sum P(3) = 1.5e-31
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 194 NSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGSKILACAASNIAV 253
++ L+ +QK+AI K + +++ ++ + EII V G ++L + ++ AV
Sbjct: 1049 DTTLNLNQKEAIDKVMRAEDYALILGMPGTGKTTVIAEIIKILVSEGKRVLLTSYTHSAV 1108
Query: 254 DNI 256
DNI
Sbjct: 1109 DNI 1111
Score = 41 (19.5 bits), Expect = 2.4e-28, Sum P(3) = 2.4e-28
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 180 KPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNV 214
K T KK AF P N NL+ + +S A K++
Sbjct: 38 KQTKRKKKYAFAPIN-NLN-GKNTKVSNASVLKSI 70
Score = 37 (18.1 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 337 KRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF-DL 372
K +++ + ++N D +L + G ++ K T F DL
Sbjct: 198 KPAEISTRESLRNIDDILDDIEGDLTIKPTITKFSDL 234
>UNIPROTKB|F1PYQ4 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:AAEX03002775 EMBL:AAEX03002776
EMBL:AAEX03002777 Ensembl:ENSCAFT00000036654 Uniprot:F1PYQ4
Length = 997
Score = 345 (126.5 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 95/292 (32%), Positives = 152/292 (52%)
Query: 322 REIQKELRTLSKEE--RKR--QQLAVTDVIKNAD-VVLTTLTGAVSRKLDNTSFDLVIID 376
+++ ++++ ++EE R + + LA+ + + N+ +V TT G +FD I+D
Sbjct: 675 QKVHQDIQKFTEEEICRSKPIKSLALLEELYNSHRIVATTCMGINHPIFSRKTFDFCIVD 734
Query: 377 EAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT 436
EA+Q + C L R +L GDH QLPP V + EA G+ +LF+RL
Sbjct: 735 EASQISQPICLGPLFFSQRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQ--NKNAV 792
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEE 496
LTVQYRM+ IM+ S+K Y+ K++ V P L + + ++E D
Sbjct: 793 VQLTVQYRMNSKIMSLSNKLTYDGKLECGSDKVANAVVNLPNLKDVKL---ELEFYADYS 849
Query: 497 DSTMNEGEAE----VAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNME 552
++ G E V + + +G SDIGII PY Q+ ++ L ++ +E
Sbjct: 850 ENPWMIGAFEPNNPVCFLNTDK---AGCKPSDIGIIAPYRQQLKIINDLLFHSS-IRMVE 905
Query: 553 VSTVDGFQGREKEAIIISMVRSNSKKEVG-FLSDRRRMNVAVTRARRQCCLV 603
V+TVD +QGR+K I++S VRSN +G L D RR+NVA+TRA+ + L+
Sbjct: 906 VNTVDKYQGRDKSIILVSFVRSNKDGPIGELLKDWRRLNVAITRAKHKLILL 957
Score = 80 (33.2 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 62/272 (22%), Positives = 114/272 (41%)
Query: 5 KTKEKQSAVSLQ--EFVSVMAPLIDLEKEAEISASITSGA-SRNLDTAQKKGSTILNL-- 59
K KE+ + L E+ S+ ++ LE +++ + ++ GS I NL
Sbjct: 397 KIKEETQHLKLTHLEYFSLWCLMLTLESQSKDNKKNHQHIWLMPASEMEESGSCIGNLIR 456
Query: 60 -KCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLK 118
+CV +T G+ L FQ GD+ P D ++L + L AL +G V +
Sbjct: 457 TECV--KTICDGQYLHNFQRKNGDI-PVTNLMAGDRIILSGEERTLF--ALSRGYVKEIN 511
Query: 119 DSSITVAFDD----IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAG-LIP 173
+S+T D +PE L RL++ E T + L LSK ++N + L
Sbjct: 512 VTSVTCLLDRNVSVLPESTL---FRLDQ--EEKTCD-IDTPLGNLSKLMENTCVSQKLRD 565
Query: 174 VLFGEQKPTVLKKDIAFKPFNSN---------LDHSQKDAISKALSSKNVFMLHXXXXXX 224
++ ++P + + P+++ L+ Q+ A+ K L SK+ ++
Sbjct: 566 LIIDFREPQFISYLSSVLPYDAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTG 625
Query: 225 XXXXVVEIILQEVKRGSKILACAASNIAVDNI 256
+ ++ G +L + ++ AVDNI
Sbjct: 626 KTTTICTLVRILYTCGFSVLLTSYTHSAVDNI 657
Score = 38 (18.4 bits), Expect = 4.0e-27, Sum P(2) = 4.0e-27
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 295 SSLASDIRKEMKALNGKLLKTKDKNTRR 322
+S+AS IR +A+ + ++ D TR+
Sbjct: 98 TSIASSIRCMRRAVLSETFRSSDLATRQ 125
>UNIPROTKB|G4MK85 [details] [associations]
symbol:MGG_02491 "DNA replication ATP-dependent helicase
dna2" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0004386 EMBL:CM001231 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742 InterPro:IPR022765
Pfam:PF01930 RefSeq:XP_003709288.1 ProteinModelPortal:G4MK85
EnsemblFungi:MGG_02491T0 GeneID:2681588 KEGG:mgr:MGG_02491
Uniprot:G4MK85
Length = 1689
Score = 204 (76.9 bits), Expect = 3.1e-31, Sum P(3) = 3.1e-31
Identities = 51/142 (35%), Positives = 83/142 (58%)
Query: 490 EEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK--ILRSKDD- 546
EE K +N EA++ + + L+ GV A++IG++T Y +Q+ LLK +LR K+
Sbjct: 1446 EEAKGNR--IVNPVEAQLVVQLVESLMTLGVPANEIGVMTHYRSQLALLKHKLLRGKNTG 1503
Query: 547 KLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVG-FLSDRRRMNVAVTRARRQCCLVCD 605
+E+ T D FQGR+KE +++S+VRSN +G L D RR+NVA TRA+ + ++
Sbjct: 1504 DATAVEMHTADRFQGRDKEVVVLSLVRSNEACHIGDLLRDWRRINVAFTRAKTKLLVIGS 1563
Query: 606 TETV---SSDGFLKRLIEYFEE 624
ET+ +D L + + E+
Sbjct: 1564 RETLRGCGADEMLSKFVRLMED 1585
Score = 183 (69.5 bits), Expect = 3.1e-31, Sum P(3) = 3.1e-31
Identities = 52/142 (36%), Positives = 75/142 (52%)
Query: 323 EIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNT-SFDLVIIDEAAQA 381
E+Q E TL+ + + + + VV TT G +S L N +FD I+DEA+Q
Sbjct: 1232 EVQ-EFATLAAQPMNSFE-EIRTAWHDLPVVATTCLG-ISHPLFNERTFDYCIVDEASQI 1288
Query: 382 LEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTV 441
C + +L GDH QLPP VQ+ EA K GL +LF+ L+D + D V + L
Sbjct: 1289 TLPICLGPIRMARTFVLVGDHNQLPPLVQNEEARKGGLDVSLFKLLSDTHPDSVVN-LEH 1347
Query: 442 QYRMHEHIMNWSSKQLYNSKIK 463
QYRM E +M S++ +Y +K
Sbjct: 1348 QYRMCEDVMALSNELIYEGHLK 1369
Score = 99 (39.9 bits), Expect = 3.1e-31, Sum P(3) = 3.1e-31
Identities = 41/166 (24%), Positives = 72/166 (43%)
Query: 130 PEEGLNSP---LRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGL-IPVLFGEQKPTVLK 185
P G P RL+K +++ L+Q+ + NGP+ L + L + +P K
Sbjct: 1080 PPLGTKEPRIRYRLDKDEFSNGMATVRNNLVQV---MANGPSGSLDLRRLVVDLEPPTFK 1136
Query: 186 KDIAFKPFNS--NLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGSKI 243
+ +L+ QK A+ K +S+K+ ++ + II +++G +
Sbjct: 1137 TVATQYEISDGESLNVDQKKAVEKVMSAKDYALVLGMPGTGKTTTIAHIIRALIRQGKSV 1196
Query: 244 LACAASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESA-LDAQ 288
L + ++ AVDNI G PA++ P+V E A L AQ
Sbjct: 1197 LLTSYTHSAVDNILLKLKGDSIPVLRLGAPAKVHPEVQEFATLAAQ 1242
Score = 45 (20.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 9/35 (25%), Positives = 22/35 (62%)
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVI 347
L TK++ +++++EL T+ ER++ ++V+
Sbjct: 937 LLTKEEKESQKLRRELWTMLSTEREKVGRCFSNVV 971
Score = 42 (19.8 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 15/68 (22%), Positives = 28/68 (41%)
Query: 434 EVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKK 493
EVT ++R EH + + K + +++S T++ ID + D E+
Sbjct: 43 EVTKDKLTKFRFQEHPGDAPQPAEATATTKGAEAPARQSSRNASTVITID-SDSDREDGA 101
Query: 494 DEEDSTMN 501
+ T N
Sbjct: 102 PKAAETTN 109
Score = 39 (18.8 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 16/68 (23%), Positives = 25/68 (36%)
Query: 292 GDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNAD 351
GD A+++ A G ++TR L+ K + + V + D
Sbjct: 504 GDFDFEAAELAATQSAQQGAAHNQTTRSTRASASACASALTHPSPKARVIQRYKVTRVDD 563
Query: 352 VVLTTLTG 359
V TT TG
Sbjct: 564 AVYTTDTG 571
>WB|WBGene00004880 [details] [associations]
symbol:smg-2 species:6239 "Caenorhabditis elegans"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IGI] [GO:0005737 "cytoplasm"
evidence=IEA;IDA;TAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0030538
"embryonic genitalia morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0051721 "protein phosphatase 2A
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
EMBL:AF074017 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016246 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 GO:GO:0040035 eggNOG:COG1112
GO:GO:0004004 GO:GO:0030538 HOGENOM:HOG000205990 KO:K14326
EMBL:FO081800 PIR:T43280 RefSeq:NP_490829.1
ProteinModelPortal:O76512 SMR:O76512 MINT:MINT-255670 STRING:O76512
PaxDb:O76512 GeneID:171696 KEGG:cel:CELE_Y48G8AL.6 UCSC:Y48G8AL.6
CTD:171696 WormBase:Y48G8AL.6 InParanoid:O76512 NextBio:872341
Uniprot:O76512
Length = 1069
Score = 372 (136.0 bits), Expect = 5.1e-31, P = 5.1e-31
Identities = 128/447 (28%), Positives = 210/447 (46%)
Query: 197 LDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEV-KRGSKILACAASNIAVDN 255
L+ SQ A+ + L+ + + ++ I+ V K +L C+ SNIAVD+
Sbjct: 446 LNSSQMQAVKQVLT-RPLSLIQGPPGTGKTVVSATIVYHLVQKTEGNVLVCSPSNIAVDH 504
Query: 256 IXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG----K 311
+ RL + E + + + ++ ++K + G K
Sbjct: 505 LAEKIHKTGLKV------VRLCARSREHS--------ETTVPYLTLQHQLKVMGGAELQK 550
Query: 312 LLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
L++ KD+ E + +LR + + K +L ADV+ T + A +L
Sbjct: 551 LIQLKDEAGELEFKDDLRYMQLKRVKEHELLAA-----ADVICCTCSSAADARLSKIRTR 605
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ QA E +++++G R +L GDH QL P V +A GL ++LFERL L
Sbjct: 606 TVLIDESTQATEPEILVSIMRGVRQLVLVGDHCQLGPVVICKKAAIAGLSQSLFERLV-L 664
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK-------AHPSGVKR--TSSTEPTLLL 481
G L VQYRMH + + S Y+ ++ H +GV +P
Sbjct: 665 LGIR-PFRLQVQYRMHPVLSEFPSNVFYDGSLQNGVTENDRHMTGVDWHWPKPNKPAFFW 723
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKI 540
+G EE S +N EA +LI++GV IG+IT Y Q ++
Sbjct: 724 -HCSGS--EELSASGTSFLNRTEAANVEKLVSKLIKAGVQPHQIGVITSYEGQRSFIVNY 780
Query: 541 LRSK---DDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
+ ++ + KL +N+E+++VD FQGREK+ II++ VRSN +GFLSD RR+NVA+TRA
Sbjct: 781 MHTQGTLNSKLYENVEIASVDAFQGREKDYIIVTCVRSNDILGIGFLSDPRRLNVAITRA 840
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFE 623
+ LV + + ++ LI +++
Sbjct: 841 KYGLVLVGNAKVLARHDLWHELINHYK 867
>DICTYBASE|DDB_G0289529 [details] [associations]
symbol:DDB_G0289529 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002934
InterPro:IPR003593 Pfam:PF01909 SMART:SM00382
dictyBase:DDB_G0289529 GO:GO:0005524 EMBL:AAFI02000141
GO:GO:0017111 eggNOG:COG1112 GO:GO:0016779 RefSeq:XP_636183.1
ProteinModelPortal:Q54HF4 EnsemblProtists:DDB0219440 GeneID:8627170
KEGG:ddi:DDB_G0289529 InParanoid:Q54HF4 ProtClustDB:CLSZ2429765
Uniprot:Q54HF4
Length = 1677
Score = 371 (135.7 bits), Expect = 6.4e-31, Sum P(3) = 6.4e-31
Identities = 112/348 (32%), Positives = 182/348 (52%)
Query: 303 KEMKALNGKLLKTKDKNT-RRE-IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA 360
K + +G++ K T R+E I E + +S + + + ++IK+A +V +TL G+
Sbjct: 1260 KNLLNSDGQIFKPNMVRTGRKEKISPECQKISLKNKNSSRRI--NLIKSASIVFSTLAGS 1317
Query: 361 VSRKL-DNTSFDLVIIDEAAQALEIACWIALLKGS--RCILAGDHLQLPPTVQSVEAEKK 417
S+ + +N S D+V+IDE+ Q+ E I L GS + IL GD +QLPPT+ S +
Sbjct: 1318 GSKAIFENFSPDIVLIDESTQSSEPTSIIPLSLGSVKKLILVGDPVQLPPTIFSKQGADC 1377
Query: 418 GLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS-GVKRTSST- 475
GL +LFERLA L QYRMH + S++ YN +K + + ++
Sbjct: 1378 GLKISLFERLAKSID---VQFLNTQYRMHPVTSKFISEEFYNGTLKDGENVSIDSYNNCK 1434
Query: 476 ---EPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDI--GIITP 530
+P+ + +K + S MN+ E + K LI+ + GIITP
Sbjct: 1435 FHFDPSFGPMKFFDLPKSNQKVIKKSIMNQDEIDKVFTLIKELIEKYPECKKLSFGIITP 1494
Query: 531 YAAQVVLLK--ILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
Y Q+ +K + RS+ L N+ VST+DG QG EK+ II+S VRS K +GFLSDRRR
Sbjct: 1495 YKLQMNQIKEQLNRSEHHNL-NISVSTIDGVQGSEKDIIIMSCVRSIEKFGIGFLSDRRR 1553
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLN 636
+NVA+TRA+ ++ + ++ D ++ + + +++ S +N
Sbjct: 1554 INVALTRAKLGLYVIGTYKVLAKDNTWEKFLIHTTIDFDHIYKSNQIN 1601
Score = 56 (24.8 bits), Expect = 6.4e-31, Sum P(3) = 6.4e-31
Identities = 32/151 (21%), Positives = 58/151 (38%)
Query: 111 QGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAG 170
Q +V L S+ T F S + K++N VT+ R + S ++N
Sbjct: 1110 QSIVCDLLYSNPTHFFTKSLNSSTQSSIHYNKISNSVTFIRSIQEF-KASPFIKN----- 1163
Query: 171 LI--PVLFGEQKPTVLKKDIAFKPF-NSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXX 227
LI P ++K + L+ SQ +AI +L + ++
Sbjct: 1164 LIFNPGCNNNLNQKMMKFPPTLETICKEKLNESQLNAIKSSLVESGITLIQGPPGTGKTT 1223
Query: 228 XVVEI--ILQEVKRGSKILACAASNIAVDNI 256
+ + +L + + KIL C S+ +VD +
Sbjct: 1224 TINYLLSVLLAIDKKFKILVCGPSHASVDEV 1254
Score = 40 (19.1 bits), Expect = 6.4e-31, Sum P(3) = 6.4e-31
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 8 EKQSAVSLQEFVSVMAPLIDL 28
EK +Q+F S ++P+I +
Sbjct: 874 EKSKVTMIQDFQSKISPIIKI 894
>UNIPROTKB|J9NRI6 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014001 PROSITE:PS51192 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Ensembl:ENSCAFT00000046272 Uniprot:J9NRI6
Length = 640
Score = 198 (74.8 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
Identities = 52/163 (31%), Positives = 83/163 (50%)
Query: 322 REIQKELRTLSKEE--RKR--QQLAVTDVIKNAD-VVLTTLTGAVSRKLDNTSFDLVIID 376
+++ ++++ ++EE R + + LA+ + + N+ +V TT G +FD I+D
Sbjct: 282 QKVHQDIQKFTEEEICRSKPIKSLALLEELYNSHRIVATTCMGINHPIFSRKTFDFCIVD 341
Query: 377 EAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT 436
EA+Q + C L R +L GDH QLPP V + EA G+ +LF+RL
Sbjct: 342 EASQISQPICLGPLFFSQRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQ--NKNAV 399
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTL 479
LTVQYRM+ IM+ S+K Y+ K++ V P L
Sbjct: 400 VQLTVQYRMNSKIMSLSNKLTYDGKLECGSDKVANAVVNLPNL 442
Score = 187 (70.9 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
Identities = 43/110 (39%), Positives = 66/110 (60%)
Query: 495 EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVS 554
E+ N EA++ + I++G SDIGII PY Q+ ++ L ++ +EV+
Sbjct: 486 EKGGVSNITEAKLIVFLTSVFIKAGCKPSDIGIIAPYRQQLKIINDLLFHSS-IRMVEVN 544
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVG-FLSDRRRMNVAVTRARRQCCLV 603
TVD +QGR+K I++S VRSN +G L D RR+NVA+TRA+ + L+
Sbjct: 545 TVDKYQGRDKSIILVSFVRSNKDGPIGELLKDWRRLNVAITRAKHKLILL 594
Score = 80 (33.2 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
Identities = 62/272 (22%), Positives = 114/272 (41%)
Query: 5 KTKEKQSAVSLQ--EFVSVMAPLIDLEKEAEISASITSGA-SRNLDTAQKKGSTILNL-- 59
K KE+ + L E+ S+ ++ LE +++ + ++ GS I NL
Sbjct: 4 KIKEETQHLKLTHLEYFSLWCLMLTLESQSKDNKKNHQHIWLMPASEMEESGSCIGNLIR 63
Query: 60 -KCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLK 118
+CV +T G+ L FQ GD+ P D ++L + L AL +G V +
Sbjct: 64 TECV--KTICDGQYLHNFQRKNGDI-PVTNLMAGDRIILSGEERTLF--ALSRGYVKEIN 118
Query: 119 DSSITVAFDD----IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAG-LIP 173
+S+T D +PE L RL++ E T + L LSK ++N + L
Sbjct: 119 VTSVTCLLDRNVSVLPESTL---FRLDQ--EEKTCD-IDTPLGNLSKLMENTCVSQKLRD 172
Query: 174 VLFGEQKPTVLKKDIAFKPFNSN---------LDHSQKDAISKALSSKNVFMLHXXXXXX 224
++ ++P + + P+++ L+ Q+ A+ K L SK+ ++
Sbjct: 173 LIIDFREPQFISYLSSVLPYDAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTG 232
Query: 225 XXXXVVEIILQEVKRGSKILACAASNIAVDNI 256
+ ++ G +L + ++ AVDNI
Sbjct: 233 KTTTICTLVRILYTCGFSVLLTSYTHSAVDNI 264
>UNIPROTKB|G4NIZ8 [details] [associations]
symbol:MGG_02784 "DNA-binding protein SMUBP-2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR024714 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0008033 GO:GO:0004386 EMBL:CM001237
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_003720957.1 EnsemblFungi:MGG_02784T0 GeneID:2682672
KEGG:mgr:MGG_02784 Uniprot:G4NIZ8
Length = 2037
Score = 379 (138.5 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 124/374 (33%), Positives = 188/374 (50%)
Query: 277 LPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKE-E 335
L + LE A A G +SL ++ E++ G++ D++ + T ++E E
Sbjct: 1486 LREALEQARAAGD-HGQTNSLQRNL-DELRKKQGQIGAQIDRD-----KASGNTYAREAE 1538
Query: 336 RKRQQLAVTDVIKNADVVLTTLTGA---VSRKLDNTSFDLVIIDEAAQALEIACWIALLK 392
KR+ + + ++ A V+ TL+GA + + L F+ VIIDEAAQ +E++ I L
Sbjct: 1539 IKRRNIQQS-ILSEAHVLCATLSGAGHDMFKSLQ-VEFETVIIDEAAQCVELSALIPLKY 1596
Query: 393 G-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN 451
G S+CIL GD QLPPTV S A + G ++LF R+ + +V +L QYRMH I
Sbjct: 1597 GASKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQQNHPGKV-HLLDCQYRMHPEISL 1655
Query: 452 WSSKQLYNSKIKAHPSGVK-RTSSTEPTLLL-----IDIAGCDMEEKKDEEDSTMNEGEA 505
+ SK+ Y + K R LL D+ G ++E+ S +N E
Sbjct: 1656 YPSKEFYEGLLADGSDMAKLRQQPWHDNPLLGPYRFFDVEG--IQERGSRGQSLVNTNEI 1713
Query: 506 EVAMAHAKRLIQSGVHASD----IGIITPYAAQVVLLKIL---RSKDDKLKNMEVSTVDG 558
VA+ + + D IGIITPY AQ+ L+ R + L+++E +T D
Sbjct: 1714 NVAIQIYTKFQADYASSIDMKGKIGIITPYKAQLFALRQKFQERWGEGVLEDIEFNTTDA 1773
Query: 559 FQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRL 618
FQGRE E II S VR++ +GF++D RRMNV +TRAR ++ D+ + F +L
Sbjct: 1774 FQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWILGDSRALRQGEFWNKL 1833
Query: 619 IEYFEEHAEYLSGS 632
IE + Y GS
Sbjct: 1834 IEDSKARDRYTQGS 1847
Score = 50 (22.7 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 14/48 (29%), Positives = 19/48 (39%)
Query: 242 KILACAASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQV 289
K+L CA SN AVD + H +L A++A V
Sbjct: 1392 KLLVCAPSNAAVDELVLRLKAGIKDTNGNTHKINVLRLGRSDAINAAV 1439
Score = 38 (18.4 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 3 GRKTKEK--QSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTI 56
G +EK Q A ++ V+ + ++ + A T+ RNLD +KK I
Sbjct: 1465 GPTDREKLHQEAGEIKVRVAALREALEQARAAGDHGQ-TNSLQRNLDELRKKQGQI 1519
Score = 37 (18.1 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 187 DIAFKPFNSNLDHSQKDAISKALSS 211
D FK NSNL +QK + +AL +
Sbjct: 867 DGRFK-VNSNLRPAQKAELLRALGT 890
>UNIPROTKB|Q8QHA5 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8355 "Xenopus laevis" [GO:0000076
"DNA replication checkpoint" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0004518 "nuclease activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0006264
"mitochondrial DNA replication" evidence=ISS] [GO:0006284
"base-excision repair" evidence=ISS] [GO:0016890 "site-specific
endodeoxyribonuclease activity, specific for altered base"
evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] InterPro:IPR026851 InterPro:IPR014808
Pfam:PF08696 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0016890 GO:GO:0045740 GO:GO:0000729 GO:GO:0017108
GO:GO:0000076 GO:GO:0043137 GO:GO:0043139 GO:GO:0043142
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOVERGEN:HBG081456
KO:K10742 EMBL:AF474372 RefSeq:NP_001079231.1 UniGene:Xl.17390
ProteinModelPortal:Q8QHA5 GeneID:378492 KEGG:xla:378492
Xenbase:XB-GENE-5829000 Uniprot:Q8QHA5
Length = 1053
Score = 202 (76.2 bits), Expect = 2.0e-30, Sum P(3) = 2.0e-30
Identities = 56/168 (33%), Positives = 84/168 (50%)
Query: 322 REIQKELRTLSKEE----RKRQQLAVTDVIKNAD-VVLTTLTGAVSRKLDNTSFDLVIID 376
+++ +++ S+EE + + L+ + + N+ VV TT G FD I+D
Sbjct: 704 QKLHPDVQEFSEEEICKAKSIKSLSALEELYNSQPVVATTCMGVNHPIFTRRRFDFCIVD 763
Query: 377 EAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT 436
EA+Q + C L R +L GDH QLPP V+S EA + G+ +LF+RL E
Sbjct: 764 EASQISQPICLGPLFFADRFVLVGDHQQLPPLVKSAEARELGMSESLFKRLER--NQEAV 821
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEP---TLLL 481
LTVQYRM+ IM S+K +Y +++ V P TLLL
Sbjct: 822 VQLTVQYRMNSKIMALSNKLVYEGRLECASDRVSNAVVQLPHIKTLLL 869
Score = 188 (71.2 bits), Expect = 2.0e-30, Sum P(3) = 2.0e-30
Identities = 49/129 (37%), Positives = 77/129 (59%)
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN--M 551
+E+ N EA++ K +++G SDIGII PY Q LK++ + + L +
Sbjct: 906 EEKGGISNWIEAKLVFHLTKLYLKAGCRPSDIGIIAPYRQQ---LKMISNYFNSLSASAV 962
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVG-FLSDRRRMNVAVTRARRQCCLVCDTETVS 610
EV+TVD +QGR+K II+S VRSN ++G L D RR+NVA+TRA+ + ++ T++
Sbjct: 963 EVNTVDKYQGRDKSVIIVSFVRSNIDGKLGDLLKDWRRLNVALTRAKHKLIMLGCVPTLN 1022
Query: 611 SDGFLKRLI 619
L++LI
Sbjct: 1023 RFDCLEQLI 1031
Score = 81 (33.6 bits), Expect = 2.0e-30, Sum P(3) = 2.0e-30
Identities = 60/249 (24%), Positives = 98/249 (39%)
Query: 50 QKKGSTILNL-KCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPA 108
++ G I NL + QT + L FQ G V PA + D VV+ + L A
Sbjct: 475 EEDGQCIGNLIRTGHVQTISDVQYLHSFQRRSGSV-PATNLASGDRVVVSGEERFL---A 530
Query: 109 LGQGVVYRLKDSSITVAFD----DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQ 164
L G + +KD +IT D +PE+ L RL+ +E ++ L LS+ ++
Sbjct: 531 LSTGYIKEVKDENITCILDRSLVKLPEDLL---FRLD---HEEGGGGLEFHLGNLSRLME 584
Query: 165 NGPAAG-LIPVLFGEQKPTVLK----------KDIAFKPFNSNLDHSQKDAISKALSSKN 213
N + L ++ KP ++ KDI L+ QK A+ + L SK+
Sbjct: 585 NSSVSEKLRKLIIDFSKPNFVQHLSSILPPDAKDIVASILRG-LNKPQKQAMKRVLLSKD 643
Query: 214 VFMLHXXXXXXXXXXVVEIILQEVKRGSKILACAASNIAVDNIXXXXXXXXXXXXXXGHP 273
++ + ++ G +L + ++ AVDNI G
Sbjct: 644 YTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLKKFQVGFLRLGRT 703
Query: 274 ARLLPQVLE 282
+L P V E
Sbjct: 704 QKLHPDVQE 712
Score = 38 (18.4 bits), Expect = 5.7e-26, Sum P(3) = 5.7e-26
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 137 PLRLE--KLANEVTYRRMKDALIQLSKGVQNGPAAGLI 172
PL L+ K +N + +R LS+ + P AGL+
Sbjct: 297 PLELKTGKESNSIEHRSQVVLYTLLSQERREDPEAGLL 334
>DICTYBASE|DDB_G0268914 [details] [associations]
symbol:DDB_G0268914 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
SMART:SM00382 dictyBase:DDB_G0268914 GO:GO:0005524
EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112 RefSeq:XP_647058.1
ProteinModelPortal:Q55EG2 EnsemblProtists:DDB0190122 GeneID:8616757
KEGG:ddi:DDB_G0268914 InParanoid:Q55EG2 OMA:ANCRVEN Uniprot:Q55EG2
Length = 4540
Score = 344 (126.2 bits), Expect = 5.7e-30, Sum P(2) = 5.7e-30
Identities = 99/292 (33%), Positives = 158/292 (54%)
Query: 346 VIKNADVVLTTLTGAVSRKLDNTSF--DLVIIDEAAQALEIACWIALLKGSRC----ILA 399
+++++ + +TL+ + S L +SF ++VI+DEA Q+ E +C I L G++ IL
Sbjct: 3668 ILEHSSICFSTLSASGSN-LVQSSFKPNVVIVDEATQSCETSCIIPLSLGAKSMKKLILV 3726
Query: 400 GDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYN 459
GD +QLPPT+ S E+ GLG +LFERL+ + SML VQYRMH I + S Q Y+
Sbjct: 3727 GDPVQLPPTIFSKESIHCGLGISLFERLSKVLP---VSMLNVQYRMHPLISKFPSSQFYH 3783
Query: 460 SKIKAHPSGVKRTSSTEPTLLLID------IAGCDMEEKKDEEDSTMNEGEAEVAMAHA- 512
+K G SS +L + I D+ + ++E T + + E+ M
Sbjct: 3784 DILK---DGDNVVSSDAYSLRFHENQDYGAIRFFDVTDSREERGKTSIKNQLEITMVFTL 3840
Query: 513 -KRLIQSGVHASD--IGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIII 569
K+L Q GI+TPY Q ++ + + N+E+ T+D FQG EK+ +I+
Sbjct: 3841 IKKLTQDHPETKQYSFGIVTPYKLQRKEIEDAYKQLNLSLNIEIKTIDSFQGSEKDIMIM 3900
Query: 570 SMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEY 621
S VR+ S +GFLSDRRR+NV++TRA+ ++ + + D LI++
Sbjct: 3901 SCVRNES---IGFLSDRRRINVSITRAKYGLFIIGNATLLKLDRTWGELIDH 3949
Score = 83 (34.3 bits), Expect = 5.7e-30, Sum P(2) = 5.7e-30
Identities = 35/134 (26%), Positives = 62/134 (46%)
Query: 135 NSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI--PVL-----FGEQK---PTVL 184
N+PL ++++ VT+ R DAL ++K P LI P + G+ + PT+L
Sbjct: 3493 NTPLSFLRVSSCVTFHRELDALETVAKS----PLFPLILKPTIEAYNQSGKDRWEIPTLL 3548
Query: 185 KKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEII--LQEVKRGSK 242
K +N L+ SQ AI+++L ++ ++ + +I + + K
Sbjct: 3549 KDH-----YNQTLNESQLAAINESLVHSSITLIQGPPGTGKTHTITSLISIILAINPDFK 3603
Query: 243 ILACAASNIAVDNI 256
IL C S+ AVD +
Sbjct: 3604 ILVCGPSHAAVDEV 3617
Score = 48 (22.0 bits), Expect = 9.1e-26, Sum P(3) = 9.1e-26
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 135 NSPLRLEKLANEVTYRRMKDAL-IQLSKGVQNGPAAGLIPVLFGEQKPTVLK 185
NS +EKL+ + ++ +++ I++ K Q + +IP LF E + +K
Sbjct: 572 NSYTGIEKLSRDFIFQDSTESITIEVLKFSQKEDVSIIIPSLFTEVQHLAIK 623
Score = 44 (20.5 bits), Expect = 9.1e-26, Sum P(3) = 9.1e-26
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 186 KDIAFKPFNSNLDHSQKDAISKALS 210
KDI FK +N N+ S+ + I +S
Sbjct: 1810 KDIIFKEYNKNIS-SEFEIIDGTMS 1833
Score = 37 (18.1 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 130 PEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQN 165
P ++SPL+LE ++ D +I + K + N
Sbjct: 902 PGLSVSSPLKLEFTNGLISSSESNDMIILILKRLFN 937
>ZFIN|ZDB-GENE-070402-1 [details] [associations]
symbol:setx "senataxin" species:7955 "Danio rerio"
[GO:0006302 "double-strand break repair" evidence=IEA]
InterPro:IPR026121 ZFIN:ZDB-GENE-070402-1 GO:GO:0006302
InterPro:IPR024481 Pfam:PF12726 GeneTree:ENSGT00580000081652
PANTHER:PTHR10887:SF15 EMBL:CU927918 IPI:IPI00481119
Ensembl:ENSDART00000082314 Ensembl:ENSDART00000149777
Uniprot:E7FBJ2
Length = 2368
Score = 367 (134.2 bits), Expect = 6.6e-30, Sum P(2) = 6.6e-30
Identities = 120/324 (37%), Positives = 173/324 (53%)
Query: 321 RREIQKELRTLS---KEERKRQQLAVTDVIKNADVVLTTLT--GAVS-----RKLDNTSF 370
+++ KE LS KE R R+Q + V++NA V+ TL+ G++ R+L + F
Sbjct: 1896 KKQFLKEREGLSRQIKECRGRRQESQALVLQNAHVICCTLSTSGSIVLENAFRRLGHEPF 1955
Query: 371 DLVIIDEAAQALEIACWIALLKGSRC---ILAGDHLQLPPTVQSVEAEKKGLGRTLFERL 427
VIIDEA+QA E I +L RC IL GD QLPPTV S +A++ G ++L RL
Sbjct: 1956 SCVIIDEASQAKETETLIPMLY--RCPSVILVGDPNQLPPTVVSQKAKEFGFDQSLMARL 2013
Query: 428 A-DLYGDEVTS----MLTVQYRMHEHIMNWSSKQLYNSKIKAH-PSGVKRTSSTEP--TL 479
L+ +L++QYRMH I + SK +YNS +K + KR S + P
Sbjct: 2014 CKSLHPSNSKLPPILLLSMQYRMHPDICEFPSKYIYNSALKNDCETAQKRCSLSWPFKPY 2073
Query: 480 LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQV--VL 537
+ D+ D E K E DS +N E + K L + A +G+ITPY AQ +L
Sbjct: 2074 KVFDVM--DGRETK-ERDSFINHKEVSLVGLLLKLLCKE--QAVRVGVITPYNAQKHRIL 2128
Query: 538 LKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK-EVGFLSDRRRMNVAVTRA 596
I S +K +EV TVDGFQGRE + II+S VR++S+ +GF+ +R+RMNV +TRA
Sbjct: 2129 DAIKTSGINKQLQVEVDTVDGFQGREMDCIIVSCVRASSEMGSIGFVGNRQRMNVTITRA 2188
Query: 597 RRQCCLVCDTETVSSDGFLKRLIE 620
+ ++ T+ LIE
Sbjct: 2189 KFSLFILGHLRTLREQSDWGALIE 2212
Score = 51 (23.0 bits), Expect = 6.6e-30, Sum P(2) = 6.6e-30
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 234 LQEVKRGSKILACAASNIAVDNI 256
L R +++L CA SN A+D++
Sbjct: 1775 LHSKSRRTRVLLCAPSNAAIDSL 1797
Score = 42 (19.8 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 14/73 (19%), Positives = 34/73 (46%)
Query: 276 LLPQVLESALDAQVLRGDNSSLA--SDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSK 333
L PQ+ E+ +A + L DI + + K+ + + + E++++ + + +
Sbjct: 892 LKPQLDETPNEASPSWSSETELVPDEDIERACQQAEEKIRQQQPRKPADEMERDYKQVEE 951
Query: 334 EERKRQQLAVTDV 346
+ R +Q +DV
Sbjct: 952 KIRPQQTRENSDV 964
>UNIPROTKB|F6UZP1 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH Ensembl:ENSCAFT00000021752
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Uniprot:F6UZP1
Length = 1021
Score = 198 (74.8 bits), Expect = 7.9e-30, Sum P(3) = 7.9e-30
Identities = 52/163 (31%), Positives = 83/163 (50%)
Query: 322 REIQKELRTLSKEE--RKR--QQLAVTDVIKNAD-VVLTTLTGAVSRKLDNTSFDLVIID 376
+++ ++++ ++EE R + + LA+ + + N+ +V TT G +FD I+D
Sbjct: 671 QKVHQDIQKFTEEEICRSKPIKSLALLEELYNSHRIVATTCMGINHPIFSRKTFDFCIVD 730
Query: 377 EAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT 436
EA+Q + C L R +L GDH QLPP V + EA G+ +LF+RL
Sbjct: 731 EASQISQPICLGPLFFSQRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQ--NKNAV 788
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTL 479
LTVQYRM+ IM+ S+K Y+ K++ V P L
Sbjct: 789 VQLTVQYRMNSKIMSLSNKLTYDGKLECGSDKVANAVVNLPNL 831
Score = 187 (70.9 bits), Expect = 7.9e-30, Sum P(3) = 7.9e-30
Identities = 43/110 (39%), Positives = 66/110 (60%)
Query: 495 EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVS 554
E+ N EA++ + I++G SDIGII PY Q+ ++ L ++ +EV+
Sbjct: 875 EKGGVSNITEAKLIVFLTSVFIKAGCKPSDIGIIAPYRQQLKIINDLLFHSS-IRMVEVN 933
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVG-FLSDRRRMNVAVTRARRQCCLV 603
TVD +QGR+K I++S VRSN +G L D RR+NVA+TRA+ + L+
Sbjct: 934 TVDKYQGRDKSIILVSFVRSNKDGPIGELLKDWRRLNVAITRAKHKLILL 983
Score = 80 (33.2 bits), Expect = 7.9e-30, Sum P(3) = 7.9e-30
Identities = 62/272 (22%), Positives = 114/272 (41%)
Query: 5 KTKEKQSAVSLQ--EFVSVMAPLIDLEKEAEISASITSGA-SRNLDTAQKKGSTILNL-- 59
K KE+ + L E+ S+ ++ LE +++ + ++ GS I NL
Sbjct: 393 KIKEETQHLKLTHLEYFSLWCLMLTLESQSKDNKKNHQHIWLMPASEMEESGSCIGNLIR 452
Query: 60 -KCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLK 118
+CV +T G+ L FQ GD+ P D ++L + L AL +G V +
Sbjct: 453 TECV--KTICDGQYLHNFQRKNGDI-PVTNLMAGDRIILSGEERTLF--ALSRGYVKEIN 507
Query: 119 DSSITVAFDD----IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAG-LIP 173
+S+T D +PE L RL++ E T + L LSK ++N + L
Sbjct: 508 VTSVTCLLDRNVSVLPESTL---FRLDQ--EEKTCD-IDTPLGNLSKLMENTCVSQKLRD 561
Query: 174 VLFGEQKPTVLKKDIAFKPFNSN---------LDHSQKDAISKALSSKNVFMLHXXXXXX 224
++ ++P + + P+++ L+ Q+ A+ K L SK+ ++
Sbjct: 562 LIIDFREPQFISYLSSVLPYDAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTG 621
Query: 225 XXXXVVEIILQEVKRGSKILACAASNIAVDNI 256
+ ++ G +L + ++ AVDNI
Sbjct: 622 KTTTICTLVRILYTCGFSVLLTSYTHSAVDNI 653
Score = 38 (18.4 bits), Expect = 1.8e-25, Sum P(3) = 1.8e-25
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 295 SSLASDIRKEMKALNGKLLKTKDKNTRR 322
+S+AS IR +A+ + ++ D TR+
Sbjct: 101 TSIASSIRCMRRAVLSETFRSSDLATRQ 128
>UNIPROTKB|E2QSH2 [details] [associations]
symbol:E2QSH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
Ensembl:ENSCAFT00000021752 Uniprot:E2QSH2
Length = 1040
Score = 198 (74.8 bits), Expect = 8.5e-30, Sum P(3) = 8.5e-30
Identities = 52/163 (31%), Positives = 83/163 (50%)
Query: 322 REIQKELRTLSKEE--RKR--QQLAVTDVIKNAD-VVLTTLTGAVSRKLDNTSFDLVIID 376
+++ ++++ ++EE R + + LA+ + + N+ +V TT G +FD I+D
Sbjct: 702 QKVHQDIQKFTEEEICRSKPIKSLALLEELYNSHRIVATTCMGINHPIFSRKTFDFCIVD 761
Query: 377 EAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT 436
EA+Q + C L R +L GDH QLPP V + EA G+ +LF+RL
Sbjct: 762 EASQISQPICLGPLFFSQRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQ--NKNAV 819
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTL 479
LTVQYRM+ IM+ S+K Y+ K++ V P L
Sbjct: 820 VQLTVQYRMNSKIMSLSNKLTYDGKLECGSDKVANAVVNLPNL 862
Score = 187 (70.9 bits), Expect = 8.5e-30, Sum P(3) = 8.5e-30
Identities = 43/110 (39%), Positives = 66/110 (60%)
Query: 495 EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVS 554
E+ N EA++ + I++G SDIGII PY Q+ ++ L ++ +EV+
Sbjct: 906 EKGGVSNITEAKLIVFLTSVFIKAGCKPSDIGIIAPYRQQLKIINDLLFHSS-IRMVEVN 964
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVG-FLSDRRRMNVAVTRARRQCCLV 603
TVD +QGR+K I++S VRSN +G L D RR+NVA+TRA+ + L+
Sbjct: 965 TVDKYQGRDKSIILVSFVRSNKDGPIGELLKDWRRLNVAITRAKHKLILL 1014
Score = 80 (33.2 bits), Expect = 8.5e-30, Sum P(3) = 8.5e-30
Identities = 62/272 (22%), Positives = 114/272 (41%)
Query: 5 KTKEKQSAVSLQ--EFVSVMAPLIDLEKEAEISASITSGA-SRNLDTAQKKGSTILNL-- 59
K KE+ + L E+ S+ ++ LE +++ + ++ GS I NL
Sbjct: 424 KIKEETQHLKLTHLEYFSLWCLMLTLESQSKDNKKNHQHIWLMPASEMEESGSCIGNLIR 483
Query: 60 -KCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLK 118
+CV +T G+ L FQ GD+ P D ++L + L AL +G V +
Sbjct: 484 TECV--KTICDGQYLHNFQRKNGDI-PVTNLMAGDRIILSGEERTLF--ALSRGYVKEIN 538
Query: 119 DSSITVAFDD----IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAG-LIP 173
+S+T D +PE L RL++ E T + L LSK ++N + L
Sbjct: 539 VTSVTCLLDRNVSVLPESTL---FRLDQ--EEKTCD-IDTPLGNLSKLMENTCVSQKLRD 592
Query: 174 VLFGEQKPTVLKKDIAFKPFNSN---------LDHSQKDAISKALSSKNVFMLHXXXXXX 224
++ ++P + + P+++ L+ Q+ A+ K L SK+ ++
Sbjct: 593 LIIDFREPQFISYLSSVLPYDAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTG 652
Query: 225 XXXXVVEIILQEVKRGSKILACAASNIAVDNI 256
+ ++ G +L + ++ AVDNI
Sbjct: 653 KTTTICTLVRILYTCGFSVLLTSYTHSAVDNI 684
Score = 38 (18.4 bits), Expect = 1.9e-25, Sum P(3) = 1.9e-25
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 295 SSLASDIRKEMKALNGKLLKTKDKNTRR 322
+S+AS IR +A+ + ++ D TR+
Sbjct: 127 TSIASSIRCMRRAVLSETFRSSDLATRQ 154
>RGD|2322000 [details] [associations]
symbol:LOC100363957 "hypothetical protein LOC100363957"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 RGD:2322000
GO:GO:0008270 GeneTree:ENSGT00550000074391 IPI:IPI00777941
Ensembl:ENSRNOT00000014695 Uniprot:F1M404
Length = 919
Score = 358 (131.1 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 123/391 (31%), Positives = 190/391 (48%)
Query: 242 KILACAASNIAVDNIXXXXXXXXXXXXXX-GHPARLLPQVLESALDAQVLRGDNSSLASD 300
K+L +++N+AVD + G ++ VL +L A DN S +
Sbjct: 507 KLLISSSTNVAVDRVLLGLLSLGFEKFIRVGSVRKIAKPVLPYSLHAS---SDNES---E 560
Query: 301 IRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVI-KNADVVLTTLTG 359
KE+ AL R E+ R ++ ++ +L V+ K A VV T
Sbjct: 561 QLKELHAL-----------MREELTPIERVYVRKSIEQHKLGTNRVLLKQARVVGITCAA 609
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACW--IALLKGSRCILAGDHLQLPPTVQSVEAEK- 416
+++ F +V++DE +Q E A IA + + IL GD QLPPT+Q +A
Sbjct: 610 CPFPCMNDLKFPVVVLDECSQMTEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHG 669
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTE 476
GL +TLF+RL L G + + T QYR H I ++ Y + S +R+ E
Sbjct: 670 NGLEQTLFDRLC-LMGHKPIQLRT-QYRCHPVISAIANDLFYEGNLVNGISERERSPVLE 727
Query: 477 --PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ 534
PTL ++ G + E+ E+S +N EA + + LI SG+ S IG+IT Y +Q
Sbjct: 728 WLPTLCFYNVTGTEQVER---ENSFVNVAEAAFTLKLIRSLIASGLEGSMIGVITLYKSQ 784
Query: 535 VVLLKILRSKDD----KLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
+ + L S D +K +EVSTVD FQG EKE II+S VR+ ++VGF+ +RMN
Sbjct: 785 MYKICSLLSAVDVDHPDVKAVEVSTVDAFQGAEKEIIILSCVRT---RQVGFIDSEKRMN 841
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEY 621
VA+TR RR ++ + + R+I++
Sbjct: 842 VALTRGRRHLLIIGSLSCLRKNQLWGRVIQH 872
>ZFIN|ZDB-GENE-090313-71 [details] [associations]
symbol:dna2 "DNA replication helicase 2 homolog
(yeast)" species:7955 "Danio rerio" [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA;ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=ISS]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
ZFIN:ZDB-GENE-090313-71 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852 EMBL:BX530068
IPI:IPI00901582 Ensembl:ENSDART00000109798 ArrayExpress:F1Q892
Bgee:F1Q892 Uniprot:F1Q892
Length = 1378
Score = 212 (79.7 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
Identities = 47/131 (35%), Positives = 78/131 (59%)
Query: 495 EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVS 554
E+ N EA + L+++G A DIG+I PY Q+ ++ L + D K +EV+
Sbjct: 1225 EKSGISNHTEAVLVQGLVTLLLKAGCRACDIGVIAPYRQQLKVISSLL-QGDAFKALEVN 1283
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVG-FLSDRRRMNVAVTRARRQCCLVCDTETVSSDG 613
TVD +QGR+K II+S VRSN++ +G L D RR+NVA+TRA+ + ++ T+
Sbjct: 1284 TVDKYQGRDKSVIIVSFVRSNAEGNLGELLQDWRRLNVAITRAKHKLLMLGSAPTLRRYA 1343
Query: 614 FLKRLIEYFEE 624
L++L+ + ++
Sbjct: 1344 PLEKLLCHLQQ 1354
Score = 187 (70.9 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
Identities = 45/123 (36%), Positives = 67/123 (54%)
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
+V TT G FD I+DEA+Q + C L R +L GDH QLPP VQ+
Sbjct: 1055 IVATTCMGVKHPIFSRRRFDFCIVDEASQISQPVCIGPLFYAQRFVLVGDHQQLPPIVQN 1114
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
EA G+ +LF+RL + + D V L VQYRM+ IM+ S+ +Y +++ G ++
Sbjct: 1115 AEARSLGMDESLFKRL-EHHRDAVVQ-LNVQYRMNSAIMSLSNALMYEGRLEC---GSEK 1169
Query: 472 TSS 474
T++
Sbjct: 1170 TAN 1172
Score = 67 (28.6 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
Identities = 60/272 (22%), Positives = 108/272 (39%)
Query: 41 GASRN--LDTAQKK---GSTILNLKCVDAQTGLM-GKTLLEFQSTKGD-VLPAHKFGTHD 93
G RN L TAQ++ G N++ + L G F+ +G+ L G
Sbjct: 777 GGRRNIWLQTAQQREKIGGCAGNMRLAGGVSILSDGVYKHSFERKEGEQTLTGLIVGDR- 835
Query: 94 VVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD-DIPEEGLNSPLRLEKLANEVTYRRM 152
+VV + +G L G V + + +T + D ++ + N+ RL++ + +
Sbjct: 836 IVVSDQDSVLIG---LSTGYVTEIAVNRVTCSLDKNLSKYSSNTVFRLDQ---DEGAGGL 889
Query: 153 KDALIQLSKGVQNGPAAGLIPVLFGEQKP--------TVLKKDIAFKPFNSN----LDHS 200
L LS ++N P + + L E +P +VL +D K SN L+
Sbjct: 890 STHLGNLSMLMENTPTSERLRELIVEFRPPQFIDSLSSVLPRDA--KDIVSNILKGLNKP 947
Query: 201 QKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGSKILACAASNIAVDNIXXXX 260
QK A+ K L SK+ ++ + ++ G +L + ++ AVDNI
Sbjct: 948 QKQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVRILHACGFSVLLTSYTHSAVDNILLKL 1007
Query: 261 XXXXXXXXXXGHPARLLPQVLESALDAQVLRG 292
G P ++ ++L +A +G
Sbjct: 1008 KRFKIGFLRLGRPQKVHHEILPFTEEACRAKG 1039
Score = 40 (19.1 bits), Expect = 9.8e-27, Sum P(3) = 9.8e-27
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 296 SLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKE 334
SL+S + ++ K + +LK +K ++ ++K L LSK+
Sbjct: 924 SLSSVLPRDAKDIVSNILKGLNKPQKQAMKKVL--LSKD 960
>DICTYBASE|DDB_G0268662 [details] [associations]
symbol:DDB_G0268662 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268662
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR002058 ProtClustDB:CLSZ2429765
RefSeq:XP_646848.1 ProteinModelPortal:Q55F22
EnsemblProtists:DDB0304624 GeneID:8616531 KEGG:ddi:DDB_G0268662
InParanoid:Q55F22 Uniprot:Q55F22
Length = 2523
Score = 360 (131.8 bits), Expect = 2.0e-29, Sum P(3) = 2.0e-29
Identities = 98/277 (35%), Positives = 150/277 (54%)
Query: 346 VIKNADVVLTTLTGAVSRKL-DNTSFDLVIIDEAAQALEIACWIALLKGS--RCILAGDH 402
+I+NA ++ TL+ + S+ + N ++V++DE+ Q+ E A I L G+ + IL GD
Sbjct: 1705 IIRNATIIFATLSASGSKPIRSNFKANIVLVDESTQSSEPASLIPLCIGNIEKLILVGDP 1764
Query: 403 LQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKI 462
LQLPPT+ S E+ K GL +LFERL+ + E ML QYRMH I + S Q Y ++
Sbjct: 1765 LQLPPTIFSSESAKNGLNISLFERLSKVLPVE---MLNTQYRMHPTISRFPSNQFYKDRL 1821
Query: 463 KAHP---SGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHA--KRLIQ 517
S V + + I D+ + K+E + + E+ M K+L+Q
Sbjct: 1822 LDGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKLVQ 1881
Query: 518 SGVHAS--DIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSN 575
GIITPY Q +K + + N+E ST+DG QG EK+ II+S VRS
Sbjct: 1882 DYPECKKFSFGIITPYKLQKSEIKEQHKQFNYPLNIETSTIDGVQGSEKDIIILSCVRS- 1940
Query: 576 SKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSD 612
+ +GFLSDRRR+NVA+TRA+ ++ +++ + D
Sbjct: 1941 --ERIGFLSDRRRINVALTRAKFGLFVIGNSKLLKKD 1975
Score = 59 (25.8 bits), Expect = 2.0e-29, Sum P(3) = 2.0e-29
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 197 LDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEI--ILQEVKRGSKILACAASNIAVD 254
L+ SQ A+ +LS+K + ++ + + IL + KIL C S+ +VD
Sbjct: 1594 LNTSQFSAVETSLSTKGITLIQGPPGTGKTTTIYYLLSILLAINPKFKILVCGPSHASVD 1653
Query: 255 NI 256
+
Sbjct: 1654 EV 1655
Score = 42 (19.8 bits), Expect = 2.0e-29, Sum P(3) = 2.0e-29
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 10 QSAVSLQ-EFVSVMAPLIDLEKEAEI 34
Q + S Q EFV++M PLI E A++
Sbjct: 1381 QDSYSDQSEFVNLMKPLIVEEYRAQL 1406
Score = 37 (18.1 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTL 357
+K+K K T + EL L + + + +IK+ + + +L
Sbjct: 1004 IKSKSKKTEYTMNVELFKLPLGHKNQSDNTIGTLIKSFIIYIKSL 1048
>RGD|1306791 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO;ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=ISO;ISS] [GO:0003678 "DNA helicase activity"
evidence=ISO;ISS] [GO:0004518 "nuclease activity" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA;ISO] [GO:0006260 "DNA replication" evidence=ISO;ISS]
[GO:0006264 "mitochondrial DNA replication" evidence=IEA;ISO]
[GO:0006284 "base-excision repair" evidence=IEA;ISO] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA;ISO] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISO;ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISO;ISS] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA;ISO] [GO:0043137 "DNA replication, removal of RNA
primer" evidence=IEA;ISO] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISO;ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO;ISS] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA;ISO] [GO:0045740 "positive regulation of DNA
replication" evidence=IEA;ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
RGD:1306791 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0006284
GO:GO:0003677 GO:GO:0051539 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043137 GO:GO:0005760 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 IPI:IPI00368049
ProteinModelPortal:D3ZG52 Ensembl:ENSRNOT00000000438
UCSC:RGD:1306791 OrthoDB:EOG4CZBF7 Uniprot:D3ZG52
Length = 1059
Score = 198 (74.8 bits), Expect = 3.8e-29, Sum P(3) = 3.8e-29
Identities = 53/162 (32%), Positives = 79/162 (48%)
Query: 323 EIQKELRTLSKEE----RKRQQLAVTDVIKNAD-VVLTTLTGAVSRKLDNTSFDLVIIDE 377
++ +++ ++EE R LA + + N+ VV TT G +FD I+DE
Sbjct: 704 KVHPDIQKFTEEEMCRLRSIASLAHLEELYNSHPVVATTCMGISHPMFSRKTFDFCIVDE 763
Query: 378 AAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS 437
A+Q + C L R +L GDH QLPP V + EA G+ +LF+RL +
Sbjct: 764 ASQISQPICLGPLFFSRRFVLVGDHKQLPPLVLNREARALGMSESLFKRLER--NESAVV 821
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTL 479
LT+QYRM+ IM+ S+K Y K++ V T P L
Sbjct: 822 QLTIQYRMNRKIMSLSNKLTYEGKLECGSDRVANAVITLPNL 863
Score = 188 (71.2 bits), Expect = 3.8e-29, Sum P(3) = 3.8e-29
Identities = 48/136 (35%), Positives = 76/136 (55%)
Query: 495 EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVS 554
E N EA + + I++G SDIGII PY Q+ + L ++ + +EV+
Sbjct: 905 ENGGVSNVTEARLIVFLTSTFIKAGCSPSDIGIIAPYRQQLRTITDLLARSS-VGMVEVN 963
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVG-FLSDRRRMNVAVTRARRQCCLVCDTETVSSDG 613
TVD +QGR+K I++S VRSN +G L D RR+NVA+TRA+ + L+ ++
Sbjct: 964 TVDKYQGRDKSLILVSFVRSNEDGTLGELLKDWRRLNVAITRAKHKLILLGSVSSLKRFP 1023
Query: 614 FLKRLIEYFEEHAEYL 629
L++L ++ +AE L
Sbjct: 1024 PLEKLFDHL--NAEQL 1037
Score = 73 (30.8 bits), Expect = 3.8e-29, Sum P(3) = 3.8e-29
Identities = 49/201 (24%), Positives = 83/201 (41%)
Query: 70 GKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD-- 127
G L FQ G +PA D ++L + L AL +G V R+ +++T D
Sbjct: 494 GHYLHNFQRKNGP-MPATNLMAGDRIILSGEERKLF--ALSKGYVKRIDTAAVTCLLDRN 550
Query: 128 --DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVL---FGEQK-- 180
+PE L RL++ E + + L LSK ++N ++ + L F E +
Sbjct: 551 LSTLPETTL---FRLDR---EEKHGDINTPLGNLSKLMENTDSSKRLRELIIDFKEPQFI 604
Query: 181 ---PTVLKKDIAFKPFN--SNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQ 235
+VL D N L+ Q+ A+ K L SK+ ++ + ++
Sbjct: 605 AYLSSVLPHDAKDTVANILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICALVRI 664
Query: 236 EVKRGSKILACAASNIAVDNI 256
G +L + ++ AVDNI
Sbjct: 665 LSACGFSVLLTSYTHSAVDNI 685
>UNIPROTKB|E1BQD2 [details] [associations]
symbol:C4H4orf21 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AADN02009328
IPI:IPI00577016 Ensembl:ENSGALT00000019715 Uniprot:E1BQD2
Length = 913
Score = 354 (129.7 bits), Expect = 3.9e-29, P = 3.9e-29
Identities = 118/391 (30%), Positives = 191/391 (48%)
Query: 242 KILACAASNIAVDNIXX-XXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASD 300
K+L +++N+AVD I G ++ +L +L A +N L
Sbjct: 508 KLLIASSTNVAVDRILLCLLDLGFEDFIRVGSIRKITKAILPYSLHAGS-GNENEQL--- 563
Query: 301 IRKEMKALNGKLLKTKDKN-TRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
KE+ AL + L +K R+ I++ L + QQ+ V V T
Sbjct: 564 --KELLALMKEDLAPAEKMYVRKSIERH--KLGTNKTALQQVKVVGV---------TCAA 610
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACW--IALLKGSRCILAGDHLQLPPTVQSVEA-EK 416
LD F +V++DE +Q E IA + + +L GD QLPPT+Q E+ +
Sbjct: 611 CPFPCLDTLKFPVVVLDECSQMTEPTSLLPIARFQCEKLVLVGDPKQLPPTIQGSESIHE 670
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTE 476
KGL +TLF+RL L G + T +L QYR H I +++ Y + S +R+ +
Sbjct: 671 KGLEQTLFDRLC-LMGHK-TILLRTQYRCHPAISAIANELFYEGNLIDGVSEKERSPLLD 728
Query: 477 --PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ 534
PTL + G + E+ ++S N E + + LI SG+ S +G+IT Y +Q
Sbjct: 729 WLPTLCFYSVNGLEQIER---DNSFYNMAEVHFTVKFIQALIASGIDGSAVGVITFYKSQ 785
Query: 535 VV----LLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
+ LL+ + S+ +K ++VSTVD FQG EKE +++S VR+ ++ GF +RMN
Sbjct: 786 MYKLQNLLRSIHSEAFPVKAVQVSTVDAFQGAEKEIVVLSCVRT---RQTGFTDSEKRMN 842
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEY 621
VA+TRA+R +V + +S + +R+I +
Sbjct: 843 VALTRAKRHLLIVGNLACLSKNRLYERVINH 873
>GENEDB_PFALCIPARUM|MAL7P1.12 [details] [associations]
symbol:MAL7P1.12 "erythrocyte
membrane-associated antigen" species:5833 "Plasmodium falciparum"
[GO:0016020 "membrane" evidence=ISS] GO:GO:0016020
InterPro:IPR014001 SMART:SM00487 EMBL:AL844506
RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35 IntAct:Q8IC35
MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA GeneID:2655186
KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 356 (130.4 bits), Expect = 4.0e-29, Sum P(3) = 4.0e-29
Identities = 104/301 (34%), Positives = 157/301 (52%)
Query: 331 LSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIAL 390
+ KE + + L + +K +VV+ T G+ DN F+ VIIDE AQ++E + I L
Sbjct: 1881 MQKEAKVMKALLFLEAVKKYNVVIATCVGSGHEIFDNEKFERVIIDECAQSIEPSNLIPL 1940
Query: 391 LKGSRC---ILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHE 447
G C +L GDH QLPPT+ S +A K GL ++L ER + +L Q RMH
Sbjct: 1941 --GHYCNNLVLIGDHKQLPPTIISPDAIKLGLDKSLLERFV-MAKIAPVHLLNTQRRMHL 1997
Query: 448 HIMNWSSKQLYNSKIK-AHPSGVKRT-------SSTEPTLLLIDIAGCDMEEKKDEEDST 499
I + + Y++K+K A+ + R + + L ID++ K + T
Sbjct: 1998 SICVFPNFHFYDNKLKTANVTEENRPIIKGFLWPNPKCRLAFIDVSIGKPGSKFENAYGT 2057
Query: 500 --MNEGEAEVAMAHAKRLIQSG-VHASDIGIITPYAAQVVLLKILRSKDDKLK-----NM 551
N E E + K +I G V +IGI+T Y AQ + LK ++ D +
Sbjct: 2058 SKFNLYEIEPLITVLKSIINEGCVSVDEIGILTAYDAQKMKLK--KAVQDAFSYEASHRI 2115
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
E+ ++DGFQG+EK+ I+ S VRSN+ E+GFL D RR+NV +TRA+R L D T+++
Sbjct: 2116 EIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRLNVMLTRAKRGVILFGDQFTLAN 2175
Query: 612 D 612
D
Sbjct: 2176 D 2176
Score = 55 (24.4 bits), Expect = 4.0e-29, Sum P(3) = 4.0e-29
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGS--KILACAAS 249
P N L+ SQK A AL+ + + ++ II K+ S KILA A S
Sbjct: 1772 PTNLPLNDSQKLACLSALT-RRLTLVQGPPGTGKTHVACAIIDSWHKQNSNKKILAVADS 1830
Query: 250 NIAVDNI 256
N+A +N+
Sbjct: 1831 NVAANNL 1837
Score = 46 (21.3 bits), Expect = 4.0e-29, Sum P(3) = 4.0e-29
Identities = 31/144 (21%), Positives = 60/144 (41%)
Query: 25 LIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVL 84
++ LE +A ++ SI +N + + S +L LK + TL + + +
Sbjct: 1518 MLALELQANLAQSIQE--KKNFEYLHENKSLLLKLKSITMPVLSCTCTLTNEEK---EWM 1572
Query: 85 PAHKFGTHDVVVLKP-----NKADLGSPALGQGVVYRLKDSSI------TVAFDDIPEEG 133
+ + D+V+LKP D S +L + D+++ + ++ +
Sbjct: 1573 KSTQMREDDIVLLKPCDTLLKDEDAWSNSLIGSITSTKSDNTVYNINIRIFSAENTKKAN 1632
Query: 134 LN-SPLRLEKLANEVTYRRMKDAL 156
+ + RL L N VT+ RM AL
Sbjct: 1633 VKYNKYRLYLLLNIVTHERMLQAL 1656
Score = 38 (18.4 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 180 KPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLH 218
+ ++ K DI N N +++ IS+ SS N+F H
Sbjct: 674 RSSINKGDITMNN-NENNNNNNNMGISR--SSSNMFTKH 709
Score = 38 (18.4 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 11/58 (18%), Positives = 23/58 (39%)
Query: 300 DIRKEMKALNGKLLKTKDKNTRREIQK-----ELRTLSKEERKRQQLAVTDVIKNADV 352
D+ + + N + +K+ +I K T S L + +++KN D+
Sbjct: 550 DMNNNILSTNETIHNVGNKHGNNDINKTNHHNNTTTTSSSSSNNNMLKLNNIMKNKDI 607
>UNIPROTKB|Q8IC35 [details] [associations]
symbol:MAL7P1.12 "Erythrocyte membrane-associated antigen"
species:36329 "Plasmodium falciparum 3D7" [GO:0016020 "membrane"
evidence=ISS] GO:GO:0016020 InterPro:IPR014001 SMART:SM00487
EMBL:AL844506 RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35
IntAct:Q8IC35 MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA
GeneID:2655186 KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 356 (130.4 bits), Expect = 4.0e-29, Sum P(3) = 4.0e-29
Identities = 104/301 (34%), Positives = 157/301 (52%)
Query: 331 LSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIAL 390
+ KE + + L + +K +VV+ T G+ DN F+ VIIDE AQ++E + I L
Sbjct: 1881 MQKEAKVMKALLFLEAVKKYNVVIATCVGSGHEIFDNEKFERVIIDECAQSIEPSNLIPL 1940
Query: 391 LKGSRC---ILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHE 447
G C +L GDH QLPPT+ S +A K GL ++L ER + +L Q RMH
Sbjct: 1941 --GHYCNNLVLIGDHKQLPPTIISPDAIKLGLDKSLLERFV-MAKIAPVHLLNTQRRMHL 1997
Query: 448 HIMNWSSKQLYNSKIK-AHPSGVKRT-------SSTEPTLLLIDIAGCDMEEKKDEEDST 499
I + + Y++K+K A+ + R + + L ID++ K + T
Sbjct: 1998 SICVFPNFHFYDNKLKTANVTEENRPIIKGFLWPNPKCRLAFIDVSIGKPGSKFENAYGT 2057
Query: 500 --MNEGEAEVAMAHAKRLIQSG-VHASDIGIITPYAAQVVLLKILRSKDDKLK-----NM 551
N E E + K +I G V +IGI+T Y AQ + LK ++ D +
Sbjct: 2058 SKFNLYEIEPLITVLKSIINEGCVSVDEIGILTAYDAQKMKLK--KAVQDAFSYEASHRI 2115
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
E+ ++DGFQG+EK+ I+ S VRSN+ E+GFL D RR+NV +TRA+R L D T+++
Sbjct: 2116 EIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRLNVMLTRAKRGVILFGDQFTLAN 2175
Query: 612 D 612
D
Sbjct: 2176 D 2176
Score = 55 (24.4 bits), Expect = 4.0e-29, Sum P(3) = 4.0e-29
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGS--KILACAAS 249
P N L+ SQK A AL+ + + ++ II K+ S KILA A S
Sbjct: 1772 PTNLPLNDSQKLACLSALT-RRLTLVQGPPGTGKTHVACAIIDSWHKQNSNKKILAVADS 1830
Query: 250 NIAVDNI 256
N+A +N+
Sbjct: 1831 NVAANNL 1837
Score = 46 (21.3 bits), Expect = 4.0e-29, Sum P(3) = 4.0e-29
Identities = 31/144 (21%), Positives = 60/144 (41%)
Query: 25 LIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVL 84
++ LE +A ++ SI +N + + S +L LK + TL + + +
Sbjct: 1518 MLALELQANLAQSIQE--KKNFEYLHENKSLLLKLKSITMPVLSCTCTLTNEEK---EWM 1572
Query: 85 PAHKFGTHDVVVLKP-----NKADLGSPALGQGVVYRLKDSSI------TVAFDDIPEEG 133
+ + D+V+LKP D S +L + D+++ + ++ +
Sbjct: 1573 KSTQMREDDIVLLKPCDTLLKDEDAWSNSLIGSITSTKSDNTVYNINIRIFSAENTKKAN 1632
Query: 134 LN-SPLRLEKLANEVTYRRMKDAL 156
+ + RL L N VT+ RM AL
Sbjct: 1633 VKYNKYRLYLLLNIVTHERMLQAL 1656
Score = 38 (18.4 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 180 KPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLH 218
+ ++ K DI N N +++ IS+ SS N+F H
Sbjct: 674 RSSINKGDITMNN-NENNNNNNNMGISR--SSSNMFTKH 709
Score = 38 (18.4 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 11/58 (18%), Positives = 23/58 (39%)
Query: 300 DIRKEMKALNGKLLKTKDKNTRREIQK-----ELRTLSKEERKRQQLAVTDVIKNADV 352
D+ + + N + +K+ +I K T S L + +++KN D+
Sbjct: 550 DMNNNILSTNETIHNVGNKHGNNDINKTNHHNNTTTTSSSSSNNNMLKLNNIMKNKDI 607
>DICTYBASE|DDB_G0285243 [details] [associations]
symbol:DDB_G0285243 "putative splicing endonuclease"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0285243 EMBL:AAFI02000076 KO:K10706
InterPro:IPR024481 Pfam:PF12726 RefSeq:XP_002649136.1
ProteinModelPortal:C7G036 EnsemblProtists:DDB0252844 GeneID:8625002
KEGG:ddi:DDB_G0285243 OMA:DSINMIF Uniprot:C7G036
Length = 2069
Score = 369 (135.0 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 113/335 (33%), Positives = 178/335 (53%)
Query: 300 DIRKEMKALNGKLLK---TKDKNTRREIQKELRTLSKEERK-RQQLAVT------DVIKN 349
D+ + +K L+ TK TR + +L+ EER+ +Q + T ++I
Sbjct: 1525 DLAERLKQQEDNKLRNEITKLNYTREKYNNDLKLAKDEERRFHEQYSNTKRNLYINIIGR 1584
Query: 350 ADVVLTTLTGAVSRKLDNTS--FDLVIIDEAAQALEIACWIALLKG-SRCILAGDHLQLP 406
+ ++L+TL+G+ L + FDLVI+DEAAQA+E++ I L +CIL GD QLP
Sbjct: 1585 SQIILSTLSGSGYDYLFTATKNFDLVIVDEAAQAVELSTLIPLRHDVKKCILVGDPQQLP 1644
Query: 407 PTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK--A 464
PT S A K +LF+RL + G T +L QYRMH I + SK Y +++
Sbjct: 1645 PTTISKVATKFQYEISLFQRLMNC-GMAPT-VLKTQYRMHPMISKFPSKIFYRGELEDGK 1702
Query: 465 HPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTM----NEGEAEVAMAHAKRLIQSGV 520
+ K+ + + D+ +K E S+ N E ++A +LI +
Sbjct: 1703 NVREYKQDYYNDSASRFGPLVFYDLFDKHGEVRSSFFSLRNPTEVKLAKLIVDQLISNYP 1762
Query: 521 HASD--IGIITPYAAQVV-LLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSK 577
+ D IG+ITPY +Q V L + +N+EVST+DGFQG+EK+ +I S VR++S
Sbjct: 1763 NTKDLEIGVITPYKSQSVDLFNAFKG----YQNVEVSTIDGFQGKEKDFVIFSSVRAHSG 1818
Query: 578 KEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSD 612
+GFLSD RRMNV +TRA+ ++ ++ +S++
Sbjct: 1819 HSIGFLSDIRRMNVGLTRAKYSMVILGNSSLLSNN 1853
Score = 37 (18.1 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 6/29 (20%), Positives = 16/29 (55%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGAS 43
L+ ++ + PL+ E A++ ++ G +
Sbjct: 1167 LKHYIDIFQPLLIEEFRAQVIRNLDEGVN 1195
>DICTYBASE|DDB_G0268660 [details] [associations]
symbol:DDB_G0268660 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268660
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 InterPro:IPR002058
ProtClustDB:CLSZ2429765 RefSeq:XP_646847.2
ProteinModelPortal:Q55F23 EnsemblProtists:DDB0304625 GeneID:8616530
KEGG:ddi:DDB_G0268660 InParanoid:Q55F23 Uniprot:Q55F23
Length = 2314
Score = 351 (128.6 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 97/278 (34%), Positives = 151/278 (54%)
Query: 345 DVIKNADVVLTTLTGAVSRKL-DNTSFDLVIIDEAAQALEIACWIALLKGS--RCILAGD 401
++I+NA++V +TL+ + S + N ++V++DE+ Q+ E A I L G+ + IL GD
Sbjct: 1505 EIIRNANIVFSTLSASGSGSVRSNFKANIVLVDESTQSSEPASLIPLCIGNIEKLILVGD 1564
Query: 402 HLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSK 461
LQLPPT+ S + + GL +LFERL+ + E ML QYRMH I + S Q Y +
Sbjct: 1565 PLQLPPTIFSSGSAENGLNISLFERLSKVLPVE---MLNTQYRMHPTISRFPSNQFYKDR 1621
Query: 462 IKAHP---SGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHA--KRLI 516
+ S V + + I D+ + K+E + + E+ M K+L+
Sbjct: 1622 LLDGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKLV 1681
Query: 517 QSGVHAS--DIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRS 574
Q GIITPY Q +K + + N+E ST+DG QG EK+ II+S VRS
Sbjct: 1682 QDYPECKKFSFGIITPYKLQKSEIKEQHKQFNYPLNIETSTIDGVQGSEKDIIILSCVRS 1741
Query: 575 NSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSD 612
+ +GFLSDRRR+NVA+TRA+ ++ +++ + D
Sbjct: 1742 ---ERIGFLSDRRRINVALTRAKFGLFVIGNSKLLKKD 1776
Score = 60 (26.2 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 197 LDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEI--ILQEVKRGSKILACAASNIAVD 254
L+ SQ +AI +LS K + ++ + + IL + KIL C S+ +VD
Sbjct: 1395 LNASQFNAIETSLSKKGITLIQGPPGTGKTTTIYYLLSILLAINPKFKILVCGPSHASVD 1454
Query: 255 NI 256
+
Sbjct: 1455 EV 1456
Score = 42 (19.8 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 10 QSAVSLQ-EFVSVMAPLIDLEKEAEI 34
Q + S Q EFV++M PLI E A++
Sbjct: 1181 QDSYSDQSEFVNLMKPLIVEEYRAQL 1206
Score = 39 (18.8 bits), Expect = 4.9e-26, Sum P(3) = 4.9e-26
Identities = 15/72 (20%), Positives = 24/72 (33%)
Query: 301 IRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA 360
+ K N KT +T I K+ T A T + D T + +
Sbjct: 847 LSNSQKISNTTSSKTPTASTTTSIIKDKATTKTTTTTTSTTANTSATTSTDKSTTASSAS 906
Query: 361 VSRKLDNTSFDL 372
+ T+FD+
Sbjct: 907 NNTSAATTTFDI 918
Score = 38 (18.4 bits), Expect = 3.3e-28, Sum P(3) = 3.3e-28
Identities = 6/16 (37%), Positives = 14/16 (87%)
Query: 5 KTKEKQSAVSLQEFVS 20
+T+ ++S ++L+EF+S
Sbjct: 477 ETQYQKSKINLEEFIS 492
>UNIPROTKB|E1BMP7 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9913 "Bos taurus" [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
[GO:0043139 "5'-3' DNA helicase activity" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISS] [GO:0004518 "nuclease
activity" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0033567
"DNA replication, Okazaki fragment processing" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0000076 "DNA
replication checkpoint" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] [GO:0043504 "mitochondrial DNA repair" evidence=IEA]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 GO:GO:0045740 GO:GO:0000729
GO:GO:0017108 GO:GO:0000076 GO:GO:0043137 EMBL:DAAA02061817
IPI:IPI00688022 NextBio:20878938 GO:GO:0005760 GO:GO:0043139
GO:GO:0043142 GO:GO:0033567 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 Uniprot:E1BMP7
Length = 1061
Score = 194 (73.4 bits), Expect = 1.7e-28, Sum P(3) = 1.7e-28
Identities = 46/147 (31%), Positives = 80/147 (54%)
Query: 322 REIQKELRTLSKEE--RKR--QQLAVTDVIKNADVVLTTLTGAVSRKL-DNTSFDLVIID 376
+++ +++ ++EE R + + LA+ + + N+ +++ T ++ + +FD I+D
Sbjct: 703 QKVHPDIQKFTEEEICRSKSIKSLALLEELYNSQLIVATTCMGINHPIFSRKTFDFCIVD 762
Query: 377 EAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT 436
EA+Q + C L R +L GDH QLPP V + EA G+ +LF+RL
Sbjct: 763 EASQISQPVCLGPLFFSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQ--NKNAV 820
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSKIK 463
LTVQYRM+ IM+ S+K Y K++
Sbjct: 821 VQLTVQYRMNSKIMSLSNKLTYEGKLE 847
Score = 189 (71.6 bits), Expect = 1.7e-28, Sum P(3) = 1.7e-28
Identities = 45/128 (35%), Positives = 76/128 (59%)
Query: 495 EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVS 554
E+ N EA++ + I++G SDIGII PY Q+ ++ L ++ + +EV+
Sbjct: 907 EKGGVSNIMEAKLVVFLTSVFIKAGCKPSDIGIIAPYRQQLKVISDLLAQSS-VGMVEVN 965
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVG-FLSDRRRMNVAVTRARRQCCLVCDTETVSSDG 613
TVD +QGR+K +++S VRSN +G L D RR+NVA+TRA+ + L+ ++S
Sbjct: 966 TVDRYQGRDKSIVVVSFVRSNEDGTLGELLKDWRRLNVAITRAKHKLILLGCVPSLSRYP 1025
Query: 614 FLKRLIEY 621
L++L+ +
Sbjct: 1026 PLRKLLNH 1033
Score = 70 (29.7 bits), Expect = 1.7e-28, Sum P(3) = 1.7e-28
Identities = 54/261 (20%), Positives = 104/261 (39%)
Query: 50 QKKGSTILNLKCVD-AQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPA 108
++ GS I +L ++ +T G+ L FQ G +P D ++L + L A
Sbjct: 473 EESGSCIGSLIRIEHVKTVCDGQYLHNFQRKNG-AIPITNLMAGDRIILSGEERTLF--A 529
Query: 109 LGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPA 168
L +G V + +++T + D GL L +L E + L LSK ++N A
Sbjct: 530 LSRGYVKEINSTTVTCSLDR-NLSGLPEST-LFRLDQEEKNCDIDTPLGNLSKLMENTRA 587
Query: 169 AG-LIPVLFGEQKPTVLKKDIAFKPFNSN---------LDHSQKDAISKALSSKNVFMLH 218
+ L ++ ++P + + P + L+ Q+ A+ K L SK+ ++
Sbjct: 588 SQKLRDLIIDFREPQFISYLSSVLPHEAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIV 647
Query: 219 XXXXXXXXXXVVEIILQEVKRGSKILACAASNIAVDNIXXXXXXXXXXXXXXGHPARLLP 278
+ ++ G +L + ++ AVDNI G ++ P
Sbjct: 648 GMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGFLRLGQIQKVHP 707
Query: 279 QVLESALDAQVLRGDN-SSLA 298
+ + + ++ R + SLA
Sbjct: 708 DI-QKFTEEEICRSKSIKSLA 727
Score = 40 (19.1 bits), Expect = 2.2e-25, Sum P(3) = 2.2e-25
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 137 PLRLE--KLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVL-FGEQKPTVLK 185
PL L+ K +N + +R LS+ + P AGL+ L G+ P K
Sbjct: 297 PLELKTGKESNSIEHRSQLVLYTLLSQERRADPEAGLLLYLKTGQMYPVPAK 348
Score = 39 (18.8 bits), Expect = 2.8e-25, Sum P(3) = 2.8e-25
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 295 SSLASDIRKEMKALNGKLLKTKDKNTRR 322
+S+AS IR +A+ + ++ D TR+
Sbjct: 129 TSIASSIRCMRRAVLSETFRSSDPATRQ 156
>UNIPROTKB|Q6ZU11 [details] [associations]
symbol:Q6ZU11 "Uncharacterized protein FLJ44066"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0016021 GO:GO:0008270
eggNOG:COG1112 UniGene:Hs.713663 EMBL:AK126054 EMBL:AL137700
IPI:IPI00300207 IPI:IPI00880006 PIR:T46441 RefSeq:NP_060862.3
UniGene:Hs.380346 ProteinModelPortal:Q6ZU11 SMR:Q6ZU11
PhosphoSite:Q6ZU11 DMDM:74711848 PaxDb:Q6ZU11 PRIDE:Q6ZU11
GeneID:55345 KEGG:hsa:55345 CTD:55345 HPA:HPA030706
neXtProt:NX_Q6ZU11 PharmGKB:PA144596502 HOGENOM:HOG000155510
InParanoid:Q6ZU11 PhylomeDB:Q6ZU11 GenomeRNAi:55345 NextBio:59679
ArrayExpress:Q6ZU11 Bgee:Q6ZU11 Genevestigator:Q6ZU11
Uniprot:Q6ZU11
Length = 926
Score = 348 (127.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 121/405 (29%), Positives = 197/405 (48%)
Query: 242 KILACAASNIAVDNIXXXXXXXXXXXXXX-GHPARLLPQVLESALDAQVLRGDNSSLASD 300
K+L +++N+AVD + G ++ +L +L A S S+
Sbjct: 512 KLLISSSTNVAVDRVLLGLLSLGFENFIRVGSVRKIAKPILPYSLHA------GSENESE 565
Query: 301 IRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVT-DVIKNADVVLTTLTG 359
KE+ AL K+ T E R ++ ++ +L ++K VV T
Sbjct: 566 QLKELHAL------MKEDLTPTE-----RVYVRKSIEQHKLGTNRTLLKQVRVVGVTCAA 614
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACW--IALLKGSRCILAGDHLQLPPTVQSVEA-EK 416
+++ F +V++DE +Q E A IA + + IL GD QLPPT+Q +A +
Sbjct: 615 CPFPCMNDLKFPVVVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHE 674
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTE 476
GL +TLF+RL L G + +L QYR H I ++ Y + + ++R+ E
Sbjct: 675 NGLEQTLFDRLC-LMGHKPI-LLRTQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLE 732
Query: 477 --PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ 534
PTL ++ G + E+ ++S N EA + + LI SG+ S IG+IT Y +Q
Sbjct: 733 WLPTLCFYNVKGLEQIER---DNSFHNVAEATFTLKLIQSLIASGIAGSMIGVITLYKSQ 789
Query: 535 VVLLKILRSKDD----KLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
+ L L S D +K ++VSTVD FQG EKE II+S VR+ ++VGF+ +RMN
Sbjct: 790 MYKLCHLLSAVDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRT---RQVGFIDSEKRMN 846
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLS-GSEY 634
VA+TR +R +V + + + R+I++ E + L ++Y
Sbjct: 847 VALTRGKRHLLIVGNLACLRKNQLWGRVIQHCEGREDGLQHANQY 891
>UNIPROTKB|K7DXW3 [details] [associations]
symbol:DNA2 "DNA replication nuclease DNA2" species:9913
"Bos taurus" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:DAAA02061817
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
Ensembl:ENSBTAT00000003395 Uniprot:K7DXW3
Length = 1137
Score = 194 (73.4 bits), Expect = 2.3e-28, Sum P(3) = 2.3e-28
Identities = 46/147 (31%), Positives = 80/147 (54%)
Query: 322 REIQKELRTLSKEE--RKR--QQLAVTDVIKNADVVLTTLTGAVSRKL-DNTSFDLVIID 376
+++ +++ ++EE R + + LA+ + + N+ +++ T ++ + +FD I+D
Sbjct: 779 QKVHPDIQKFTEEEICRSKSIKSLALLEELYNSQLIVATTCMGINHPIFSRKTFDFCIVD 838
Query: 377 EAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT 436
EA+Q + C L R +L GDH QLPP V + EA G+ +LF+RL
Sbjct: 839 EASQISQPVCLGPLFFSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQ--NKNAV 896
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSKIK 463
LTVQYRM+ IM+ S+K Y K++
Sbjct: 897 VQLTVQYRMNSKIMSLSNKLTYEGKLE 923
Score = 189 (71.6 bits), Expect = 2.3e-28, Sum P(3) = 2.3e-28
Identities = 45/128 (35%), Positives = 76/128 (59%)
Query: 495 EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVS 554
E+ N EA++ + I++G SDIGII PY Q+ ++ L ++ + +EV+
Sbjct: 983 EKGGVSNIMEAKLVVFLTSVFIKAGCKPSDIGIIAPYRQQLKVISDLLAQSS-VGMVEVN 1041
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVG-FLSDRRRMNVAVTRARRQCCLVCDTETVSSDG 613
TVD +QGR+K +++S VRSN +G L D RR+NVA+TRA+ + L+ ++S
Sbjct: 1042 TVDRYQGRDKSIVVVSFVRSNEDGTLGELLKDWRRLNVAITRAKHKLILLGCVPSLSRYP 1101
Query: 614 FLKRLIEY 621
L++L+ +
Sbjct: 1102 PLRKLLNH 1109
Score = 70 (29.7 bits), Expect = 2.3e-28, Sum P(3) = 2.3e-28
Identities = 54/261 (20%), Positives = 104/261 (39%)
Query: 50 QKKGSTILNLKCVD-AQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPA 108
++ GS I +L ++ +T G+ L FQ G +P D ++L + L A
Sbjct: 549 EESGSCIGSLIRIEHVKTVCDGQYLHNFQRKNG-AIPITNLMAGDRIILSGEERTLF--A 605
Query: 109 LGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPA 168
L +G V + +++T + D GL L +L E + L LSK ++N A
Sbjct: 606 LSRGYVKEINSTTVTCSLDR-NLSGLPEST-LFRLDQEEKNCDIDTPLGNLSKLMENTRA 663
Query: 169 AG-LIPVLFGEQKPTVLKKDIAFKPFNSN---------LDHSQKDAISKALSSKNVFMLH 218
+ L ++ ++P + + P + L+ Q+ A+ K L SK+ ++
Sbjct: 664 SQKLRDLIIDFREPQFISYLSSVLPHEAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIV 723
Query: 219 XXXXXXXXXXVVEIILQEVKRGSKILACAASNIAVDNIXXXXXXXXXXXXXXGHPARLLP 278
+ ++ G +L + ++ AVDNI G ++ P
Sbjct: 724 GMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGFLRLGQIQKVHP 783
Query: 279 QVLESALDAQVLRGDN-SSLA 298
+ + + ++ R + SLA
Sbjct: 784 DI-QKFTEEEICRSKSIKSLA 803
Score = 40 (19.1 bits), Expect = 2.9e-25, Sum P(3) = 2.9e-25
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 137 PLRLE--KLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVL-FGEQKPTVLK 185
PL L+ K +N + +R LS+ + P AGL+ L G+ P K
Sbjct: 373 PLELKTGKESNSIEHRSQLVLYTLLSQERRADPEAGLLLYLKTGQMYPVPAK 424
Score = 39 (18.8 bits), Expect = 3.6e-25, Sum P(3) = 3.6e-25
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 295 SSLASDIRKEMKALNGKLLKTKDKNTRR 322
+S+AS IR +A+ + ++ D TR+
Sbjct: 205 TSIASSIRCMRRAVLSETFRSSDPATRQ 232
>TAIR|locus:2018536 [details] [associations]
symbol:AT1G65780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684 GO:GO:0004386
KO:K10706 InterPro:IPR026852 PANTHER:PTHR10887:SF27 IPI:IPI00534309
RefSeq:NP_176754.1 UniGene:At.52386 ProteinModelPortal:F4IBK4
SMR:F4IBK4 PRIDE:F4IBK4 EnsemblPlants:AT1G65780.1 GeneID:842889
KEGG:ath:AT1G65780 Uniprot:F4IBK4
Length = 1065
Score = 347 (127.2 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 113/297 (38%), Positives = 157/297 (52%)
Query: 358 TGAVSRKL-DNTSFDLVIIDEAAQALEIACWIAL-LKGSR-CILAGDHLQLPPTVQSVEA 414
T + S +L T L++IDEAAQ E I + L G R IL GD QLP V+S A
Sbjct: 551 TASCSARLYTGTPIQLLVIDEAAQLKECESSIPMQLPGLRHLILVGDERQLPAMVESQIA 610
Query: 415 EKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS 474
+ G GR+LFERLA L G + ML +QYRMH I ++ +K+LY KI P+ V++ +
Sbjct: 611 LEAGFGRSLFERLA-LLGHK-KYMLNIQYRMHCSISSFPNKELYGKKILDAPT-VRQRNY 667
Query: 475 TEPTL--------LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHAS--- 523
T+ L I+IA E + E S N E V A L+Q
Sbjct: 668 TKQYLPGEMYGPYSFINIAYGREEYGEGEGRSLKNNVEVVVVAAIIANLLQVSEKTKTRI 727
Query: 524 DIGIITPYAAQVVLL--KILRSK-DDK--LKNMEVSTVDGFQGREKEAIIISMVRSNSKK 578
++G+I+PY AQV+ + KI + D L ++ + TVDGFQG E++ II+S VRSN
Sbjct: 728 NVGVISPYKAQVIAIQEKIQETSIGDAGGLFSLRIRTVDGFQGGEEDIIIVSTVRSNGVG 787
Query: 579 EVGFLSDRRRMNVAVTRARRQCCLVCDTET--VSSDGFLKRLIEYFEEHAEYLSGSE 633
VGFL +RRR NV +TRAR C + E ++S + LI+ +E + S E
Sbjct: 788 RVGFLGNRRRTNVLLTRARF-CLWILGNEATLMNSKSVWRNLIQDAKERGCFHSAGE 843
Score = 48 (22.0 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 29/101 (28%), Positives = 45/101 (44%)
Query: 62 VDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPA--LGQGVVYRLKD 119
VD G + K +EF+ST GD F T +++ A L S L Q V +
Sbjct: 26 VDLYKGQVEKIPMEFEST-GDY-----FKTFIPPLIEETHAALLSSMRKLWQAPVVEISY 79
Query: 120 SSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLS 160
T + +P + L +RL ++NE + + M LI L+
Sbjct: 80 IMQTAEYK-LPND-LFYKVRLSGISNEASTKLMPRDLISLT 118
Score = 37 (18.1 bits), Expect = 3.8e-27, Sum P(2) = 3.8e-27
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 55 TILNLKCVDAQTGLMGKTLLEFQS-----TKGDVLPAHKFGTHDVVV 96
T+LN KC G ++LE S G L +G DVV+
Sbjct: 282 TLLNAKCRTLTCGPTNVSVLEVASRVLKLVSGS-LKIGNYGLGDVVL 327
>MGI|MGI:2443732 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10090 "Mus musculus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000729 "DNA double-strand break processing"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=ISO]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006260 "DNA
replication" evidence=ISO] [GO:0006264 "mitochondrial DNA
replication" evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISO] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0032508 "DNA
duplex unwinding" evidence=ISO] [GO:0033567 "DNA replication,
Okazaki fragment processing" evidence=ISO] [GO:0042645
"mitochondrial nucleoid" evidence=ISO] [GO:0043137 "DNA
replication, removal of RNA primer" evidence=ISO] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISO] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISO]
[GO:0043504 "mitochondrial DNA repair" evidence=ISO] [GO:0045740
"positive regulation of DNA replication" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
MGI:MGI:2443732 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0005760 GO:GO:0043139 GO:GO:0043142 GO:GO:0043504
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:AK129051 EMBL:AK028381
EMBL:BC025182 EMBL:BC115716 IPI:IPI00224915 IPI:IPI00816966
RefSeq:NP_796346.2 UniGene:Mm.21492 ProteinModelPortal:Q6ZQJ5
SMR:Q6ZQJ5 STRING:Q6ZQJ5 PaxDb:Q6ZQJ5 PRIDE:Q6ZQJ5
Ensembl:ENSMUST00000092462 Ensembl:ENSMUST00000131422 GeneID:327762
KEGG:mmu:327762 UCSC:uc007fji.2 UCSC:uc007fjj.2
GeneTree:ENSGT00550000074852 InParanoid:Q6ZQJ5 OMA:EHESLCH
ChiTaRS:DNA2 NextBio:397947 Bgee:Q6ZQJ5 CleanEx:MM_DNA2
Genevestigator:Q6ZQJ5 GermOnline:ENSMUSG00000036875 Uniprot:Q6ZQJ5
Length = 1062
Score = 192 (72.6 bits), Expect = 2.9e-28, Sum P(3) = 2.9e-28
Identities = 59/189 (31%), Positives = 90/189 (47%)
Query: 323 EIQKELRTLSKEE--RKRQ--QLAVTDVIKNAD-VVLTTLTGAVSRKLDNTSFDLVIIDE 377
++ +++ ++EE R R LA + + N+ +V TT G +FD I+DE
Sbjct: 705 KVHPDIQKFTEEEICRSRSIASLAHLEELYNSHPIVATTCMGINHPIFSRKTFDFCIVDE 764
Query: 378 AAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS 437
A+Q + C L R +L GDH QLPP V + EA G+ +LF+RL +
Sbjct: 765 ASQISQPVCLGPLFFSRRFVLVGDHQQLPPLVVNREARALGMSESLFKRLER--NESAVV 822
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEED 497
LTVQYRM+ IM+ S+K Y K++ G R ++ L + A ++ D D
Sbjct: 823 QLTVQYRMNRKIMSLSNKLTYAGKLEC---GSDRVANAVLALPNLKDARLSLQLYADYSD 879
Query: 498 STMNEGEAE 506
S G E
Sbjct: 880 SPWLAGVLE 888
Score = 183 (69.5 bits), Expect = 2.9e-28, Sum P(3) = 2.9e-28
Identities = 42/110 (38%), Positives = 65/110 (59%)
Query: 495 EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVS 554
E N EA + + I++G SDIG+I PY Q+ ++ L ++ + +EV+
Sbjct: 908 ENGGVSNVTEARLIVFLTSTFIKAGCSPSDIGVIAPYRQQLRIISDLLARSS-VGMVEVN 966
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVG-FLSDRRRMNVAVTRARRQCCLV 603
TVD +QGR+K I++S VRSN +G L D RR+NVA+TRA+ + L+
Sbjct: 967 TVDKYQGRDKSLILVSFVRSNEDGTLGELLKDWRRLNVALTRAKHKLILL 1016
Score = 76 (31.8 bits), Expect = 2.9e-28, Sum P(3) = 2.9e-28
Identities = 52/262 (19%), Positives = 109/262 (41%)
Query: 50 QKKGSTILNLKCVDAQTGLM-GKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPA 108
++ G+ + NL + + + G+ L FQ G +PA D ++L + L A
Sbjct: 474 EESGNCVGNLVRTEPVSRVCDGQYLHNFQRKNGP-MPATNLMAGDRIILSGEERKLF--A 530
Query: 109 LGQGVVYRLKDSSITVAFD-DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQN-G 166
L +G V ++ +++T D ++ + RL++ E + + L LSK +++
Sbjct: 531 LSKGYVKKMNKAAVTCLLDRNLSTLPATTVFRLDR---EERHGDISTPLGNLSKLMESTD 587
Query: 167 PAAGLIPVLFGEQKP-------TVLKKDIAFKPFN--SNLDHSQKDAISKALSSKNVFML 217
P+ L ++ ++P +VL D N L+ Q+ A+ + L SK+ ++
Sbjct: 588 PSKRLRELIIDFREPQFIAYLSSVLPHDAKDTVANILKGLNKPQRQAMKRVLLSKDYTLI 647
Query: 218 HXXXXXXXXXXVVEIILQEVKRGSKILACAASNIAVDNIXXXXXXXXXXXXXXGHPARLL 277
+ ++ G +L + ++ AVDNI G ++
Sbjct: 648 VGMPGTGKTTTICALVRILSACGFSVLLTSYTHSAVDNILLKLAKFKVGFLRLGQSHKVH 707
Query: 278 PQVLESALDAQVLRGDN-SSLA 298
P + + + ++ R + +SLA
Sbjct: 708 PDI-QKFTEEEICRSRSIASLA 728
>TAIR|locus:2059088 [details] [associations]
symbol:AT2G19120 "AT2G19120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009506 "plasmodesma" evidence=IDA] GO:GO:0009506
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0004386 GO:GO:0004519
eggNOG:COG1112 EMBL:AC002392 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI00542366 PIR:T00533
RefSeq:NP_179502.1 UniGene:At.52824 ProteinModelPortal:O64476
SMR:O64476 PaxDb:O64476 PRIDE:O64476 EnsemblPlants:AT2G19120.1
GeneID:816429 KEGG:ath:AT2G19120 TAIR:At2g19120
HOGENOM:HOG000084788 InParanoid:O64476 OMA:DWAALIS PhylomeDB:O64476
ProtClustDB:CLSN2683158 ArrayExpress:O64476 Genevestigator:O64476
Uniprot:O64476
Length = 1090
Score = 353 (129.3 bits), Expect = 3.5e-28, Sum P(3) = 3.5e-28
Identities = 108/281 (38%), Positives = 151/281 (53%)
Query: 335 ERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNT---SFDLVIIDEAAQALEIACWIALL 391
E R L + A++V TT++ + RKL + FD+V+IDEAAQA E+ L
Sbjct: 739 EEARASLEAS-FANEAEIVFTTVSSS-GRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLA 796
Query: 392 KGS-RCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIM 450
G+ RC+L GD QLP TV S A R+LFER L G T +LTVQYRMH I
Sbjct: 797 LGAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERF-QLAGCP-TLLLTVQYRMHPQIR 854
Query: 451 NWSSKQLYNSKIK---AHPSGVKRTSSTEPTL---LLIDIAGCDMEEKKDEEDSTMNEGE 504
++ S+ Y ++K + S +P L L +I+ E + S N E
Sbjct: 855 DFPSRYFYQGRLKDSESISSAPDEIYYKDPVLRPYLFFNISH-GRESHRGGSVSYENVDE 913
Query: 505 AEVAMA---HAKRLIQS-GVHASDIGIITPYAAQVVLLKILRSK---DDKLKNMEVSTVD 557
A + H ++ ++S G +G+ITPY Q+ LK D+LK + ++TVD
Sbjct: 914 ARFCVGVYMHLQKTLKSLGAGKVSVGVITPYKLQLKCLKHEFGNALGQDELKEIYINTVD 973
Query: 558 GFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARR 598
FQG+E++ II+S VR+ S VGF+SD RRMNVA+TRARR
Sbjct: 974 AFQGQERDVIIMSCVRA-SGHGVGFVSDIRRMNVALTRARR 1013
Score = 41 (19.5 bits), Expect = 3.5e-28, Sum P(3) = 3.5e-28
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRN 45
S++E+V V PL+ E A++ ++ A N
Sbjct: 263 SMEEYVRVFEPLLFEECRAQLYSTWVELAEAN 294
Score = 41 (19.5 bits), Expect = 3.5e-28, Sum P(3) = 3.5e-28
Identities = 30/121 (24%), Positives = 46/121 (38%)
Query: 242 KILACAASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDI 301
++L CA SN A D + G P V +D+Q S A +
Sbjct: 580 RMLVCAPSNAATDELLSRVLDRGFID---GEMRVYRPDVARVGVDSQ------SRAAQAV 630
Query: 302 RKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERK-RQQLAVTDVIKNADVVLTTLTGA 360
E ++ +LL +R EI + +R L +E + Q +A NA T G+
Sbjct: 631 SVERRS--DQLLAI----SRDEILRHMRNLRLQETQISQNIAGLKRELNAAAFATRSQGS 684
Query: 361 V 361
V
Sbjct: 685 V 685
>DICTYBASE|DDB_G0274399 [details] [associations]
symbol:DDB_G0274399 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR003593 SMART:SM00382
dictyBase:DDB_G0274399 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000012 GO:GO:0004386 eggNOG:COG1112 RefSeq:XP_644230.1
ProteinModelPortal:Q86AS0 EnsemblProtists:DDB0237968 GeneID:8619659
KEGG:ddi:DDB_G0274399 OMA:LIMISLH Uniprot:Q86AS0
Length = 967
Score = 352 (129.0 bits), Expect = 3.8e-28, Sum P(3) = 3.8e-28
Identities = 126/408 (30%), Positives = 192/408 (47%)
Query: 237 VKRGS---KILACAASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGD 293
VK GS +IL CA SN AVD I G + P ++ +V G
Sbjct: 455 VKGGSTKRRILLCAPSNGAVDEIVSRLIRDGLLNAD-GR--KYNPNLV------RVGPGS 505
Query: 294 NSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAV-TDVIKNADV 352
+S + S M +L+ + T + ++ T V+ AD+
Sbjct: 506 HSDVESVSLDYMVRCRQQLMNSNSAIPSSSASTAAATSGSSRSTQDTSSIRTLVLDEADI 565
Query: 353 VLTTLTGAVSRKLDNTS--FDLVIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTV 409
V TTL+ + + L + FD+VIIDEAAQA+E + I + G + +L GD QLP T+
Sbjct: 566 VATTLSFSGASLLTKMAGGFDIVIIDEAAQAVETSTLIPIQHGCKKVVLVGDPKQLPATI 625
Query: 410 QSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGV 469
S A K ++LF+RL + MLT QYRMH I + S+ Y + P+
Sbjct: 626 ISPLAIKYKYDQSLFQRLQEKNSPH---MLTTQYRMHSLIRAFPSRHFYQDLLLDGPNIP 682
Query: 470 KRTSSTEPTLLLIDIAGCDME---EKKDEEDSTMNEGEAEVAMAHAK---RLIQSGVHAS 523
R + + D+ E K S NE E ++AM + ++ AS
Sbjct: 683 SRATHYHSNPFFGPLVFYDLSWSTETKPGGGSVFNEHECKMAMYLFQLFTKVYPDEDFAS 742
Query: 524 DIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKE--VG 581
IGII+PY QV+ L+ + + + TVDGFQGRE+E II S VR+ ++ +G
Sbjct: 743 RIGIISPYRQQVLALREIFKN---YPGISIDTVDGFQGREREIIIFSCVRAPVEEGAGIG 799
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYL 629
FLSD RRMNVA+TR R ++ +T+ +S + LI++ + + + +
Sbjct: 800 FLSDVRRMNVALTRPRSSLLILGNTKALSINKDWNELIQHTQNNQQLI 847
Score = 41 (19.5 bits), Expect = 3.8e-28, Sum P(3) = 3.8e-28
Identities = 23/87 (26%), Positives = 40/87 (45%)
Query: 5 KTKE-KQSAVSL---QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLK 60
K KE K VS +++++ PL+ E A++ SI G DT++ S + +
Sbjct: 59 KEKELKPVKVSFNNEEDYITTYEPLLFEECRAQLERSIEEGEKD--DTSEPTLSRVRYIS 116
Query: 61 CVD--AQTGL-MGKTLLEFQSTKGDVL 84
V+ GL M + + FQ D++
Sbjct: 117 EVNDFLVVGLVMAENVNIFQFHDNDLI 143
Score = 39 (18.8 bits), Expect = 3.8e-28, Sum P(3) = 3.8e-28
Identities = 19/76 (25%), Positives = 33/76 (43%)
Query: 142 KLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQ 201
KL N T +R AL Q S+ N ++ GE + + F+S + SQ
Sbjct: 282 KLCNLSTLQREFAALYQCSQS--NFMKTLMMRDDDGEDGIVMKIPPLLHDQFSSTYNDSQ 339
Query: 202 KDAISKALSSKNVFML 217
+A++ AL + ++
Sbjct: 340 LNALTSALEGNAITLI 355
>UNIPROTKB|E1BG37 [details] [associations]
symbol:E1BG37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 EMBL:DAAA02016483 IPI:IPI00912094
Ensembl:ENSBTAT00000017567 OMA:HKLGTNK Uniprot:E1BG37
Length = 933
Score = 345 (126.5 bits), Expect = 4.1e-28, P = 4.1e-28
Identities = 123/393 (31%), Positives = 192/393 (48%)
Query: 242 KILACAASNIAVDNIXXXXXXXXXXXXXX-GHPARLLPQVLESALDAQVLRGDNSSLASD 300
K+L +++N+AVD + G ++ VL +L A +N L
Sbjct: 513 KLLISSSTNVAVDRVLLGLLSLGFEKFVRVGSVRKIAKPVLPYSLYAGS-ENENEQL--- 568
Query: 301 IRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTD-VIKNADVVLTTLTG 359
KE+ AL K+ T E R ++ ++ +L ++K VV T
Sbjct: 569 --KELHAL------MKEDLTPVE-----RVYVRKSIEQHKLGTNKTLLKQVRVVGVTCAA 615
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACW--IALLKGSRCILAGDHLQLPPTVQSVEA-EK 416
+++ F +V++DE +Q E A IA + + IL GD QLPPT+Q +A +
Sbjct: 616 CPFPCMNDLKFPVVVLDECSQMTEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHE 675
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTE 476
GL +TLF+RL L G + +L QYR H I ++ Y + S +R+ E
Sbjct: 676 NGLEQTLFDRLC-LMGHKPI-LLRTQYRCHPTISAIANDLFYEGNLMNGISETERSPLLE 733
Query: 477 --PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ 534
PTL ++ G + E+ + S N EA + + LI SG+ S IG+IT Y +Q
Sbjct: 734 WLPTLCFYNVKGLEQIERGN---SFHNVAEAAFTLKLIQSLIASGIAGSMIGVITLYKSQ 790
Query: 535 VV-LLKILRSKD-D--KLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
+ L +L + D D LK ++VSTVD FQG EKE II+S VR+ ++VGF+ +RMN
Sbjct: 791 MYKLCHLLSAMDFDHPNLKAVQVSTVDAFQGAEKEIIILSCVRT---RQVGFIDSEKRMN 847
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFE 623
VA+TR RR +V + + + R+I++ E
Sbjct: 848 VALTRGRRHLLIVGNLACLRKNRLWGRVIQHCE 880
>TAIR|locus:2166173 [details] [associations]
symbol:AT5G37150 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004386
KO:K10706 IPI:IPI01020555 RefSeq:NP_198531.2 UniGene:At.55176
ProteinModelPortal:F4K5W5 SMR:F4K5W5 PRIDE:F4K5W5
EnsemblPlants:AT5G37150.1 GeneID:833688 KEGG:ath:AT5G37150
OMA:RSVDEYY Uniprot:F4K5W5
Length = 839
Score = 341 (125.1 bits), Expect = 5.1e-28, Sum P(2) = 5.1e-28
Identities = 101/279 (36%), Positives = 147/279 (52%)
Query: 347 IKNADVVLTTLTGAVSRKLDNT-SFDLVIIDEAAQALEIACWIAL-LKGSR-CILAGDHL 403
++NAD++L T +GA ++ T + +L+++DEAAQ E AL L G R IL GD
Sbjct: 503 LQNADIILCTASGAAEMNVERTGNVELLVVDEAAQLKECESVAALQLPGLRHAILIGDEF 562
Query: 404 QLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK 463
QLP V + EK GR+LFERL L G +L VQYRMH I + +K+ Y +IK
Sbjct: 563 QLPAMVHNEMCEKAKFGRSLFERLV-LLGHN-KHLLDVQYRMHPSISRFPNKEFYGGRIK 620
Query: 464 AHPSGVKRTSSTEPTL---LLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHA--KRLIQ 517
VK + + L + + ++ K+E D + EVA+ L +
Sbjct: 621 -DAENVKESIYQKRFLQGNMFGSFSFINVGRGKEEFGDGHSPKNMVEVAVVSEIISNLFK 679
Query: 518 SGVHAS---DIGIITPYAAQV-VLLKILRSKDDKLKNME----VSTVDGFQGREKEAIII 569
+G+++PY Q+ + + + K L + V +VDGFQG E++ III
Sbjct: 680 VSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFALNVRSVDGFQGGEEDIIII 739
Query: 570 SMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTET 608
S VRSNS +VGFL++R+R NVA+TRAR C V ET
Sbjct: 740 STVRSNSNGKVGFLNNRQRANVALTRARH-CLWVIGNET 777
Score = 48 (22.0 bits), Expect = 5.1e-28, Sum P(2) = 5.1e-28
Identities = 16/66 (24%), Positives = 30/66 (45%)
Query: 194 NSNLDHSQKDAISKALSSKN------VFMLHXXXXXXXXXXVVEIILQEVKRGSKILACA 247
++ L+ SQ+DAI L ++N V ++ V ++ +K K + CA
Sbjct: 218 STKLNSSQEDAILGCLETRNCTHKNSVKLIWGPPGTGKTKTVATLLFALLKLRCKTVVCA 277
Query: 248 ASNIAV 253
+N A+
Sbjct: 278 PTNTAI 283
>UNIPROTKB|F1PCI1 [details] [associations]
symbol:C4orf21 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AAEX03016829
Ensembl:ENSCAFT00000018553 Uniprot:F1PCI1
Length = 1024
Score = 344 (126.2 bits), Expect = 6.3e-28, P = 6.3e-28
Identities = 120/393 (30%), Positives = 195/393 (49%)
Query: 242 KILACAASNIAVDNIXXXXXXXXXXXXXX-GHPARLLPQVLESALDAQVLRGDNSSLASD 300
K+L +++N+AVD + G ++ +L +L A +N +
Sbjct: 611 KLLISSSTNVAVDRVLLGLLSLGFEKFVRVGSVRKIAKPILPYSLHAG---SENEN---- 663
Query: 301 IRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTD-VIKNADVVLTTLTG 359
+++K L+G + K+ T E R ++ ++ +L ++K VV T
Sbjct: 664 --EQLKELHGLM---KEDLTPLE-----RVYVRKSIEQHKLGTNKTLLKQVRVVGVTCAA 713
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACW--IALLKGSRCILAGDHLQLPPTVQSVEA-EK 416
+++ F +V++DE +Q E A IA + + IL GD QL PT+Q +A +
Sbjct: 714 CPFPCMNDLKFPVVVLDECSQITEPASLLPIARFECEKLILVGDPKQLSPTIQGSDAAHE 773
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTE 476
GL +TLF+RL L G + +L QYR H I + S+ Y + S +R E
Sbjct: 774 NGLEQTLFDRLC-LMGHKPV-LLRTQYRCHPAISDISNDLFYEGNLVDGISETERGPLLE 831
Query: 477 --PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ 534
PTL +I G E+ + ++S N EA + + LI SG+ S IG+IT Y +Q
Sbjct: 832 WLPTLCFYNIKG---PEQIERDNSFHNVAEAAFTLKLIQSLIASGIAGSMIGVITLYKSQ 888
Query: 535 VV-LLKILRSKD-DK--LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
+ L +L + D D +K ++VSTVD FQG EKE II+S VR+ ++VGF+ +RMN
Sbjct: 889 MYKLCHLLSAVDFDNPDIKAVQVSTVDAFQGAEKEIIILSCVRT---RQVGFIDSEKRMN 945
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFE 623
VA+TR RR +V + + + R+I++ E
Sbjct: 946 VALTRGRRHLLIVGNLACLRKNRLWGRVIQHCE 978
>TAIR|locus:2173033 [details] [associations]
symbol:AT5G52090 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0004519 eggNOG:COG1112
EMBL:AB015478 KO:K10706 IPI:IPI00525648 RefSeq:NP_200022.1
UniGene:At.65668 ProteinModelPortal:Q9FJ83 SMR:Q9FJ83 PRIDE:Q9FJ83
EnsemblPlants:AT5G52090.1 GeneID:835285 KEGG:ath:AT5G52090
TAIR:At5g52090 HOGENOM:HOG000083772 InParanoid:Q9FJ83 OMA:TACEASE
PhylomeDB:Q9FJ83 ProtClustDB:CLSN2686886 Genevestigator:Q9FJ83
Uniprot:Q9FJ83
Length = 676
Score = 336 (123.3 bits), Expect = 6.5e-28, Sum P(2) = 6.5e-28
Identities = 101/279 (36%), Positives = 147/279 (52%)
Query: 347 IKNADVVLTTLTGAVSRKLDNT-SFDLVIIDEAAQALEIACWIAL-LKGSR-CILAGDHL 403
++NAD++L T +GA ++ T + +L+++DEAAQ E AL L G R IL GD
Sbjct: 340 LQNADIILCTASGAAEMNVERTGNVELLVVDEAAQLKECESVAALQLPGLRHAILIGDEF 399
Query: 404 QLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK 463
QLP V + EK GR+LFERL L G +L VQYRMH I + +K+ Y +IK
Sbjct: 400 QLPAMVHNEMCEKAKFGRSLFERLV-LLGHN-KHLLDVQYRMHPSISRFPNKEFYGGRIK 457
Query: 464 AHPSGVKRTSSTEPTLL--LID-IAGCDMEEKKDE-EDSTMNEGEAEVAMAHA--KRLIQ 517
VK + + L + D + ++ K+E D + EVA+ L +
Sbjct: 458 -DAENVKESIYQKRFLKGNMFDSFSFINVGRGKEEFGDGHSPKNMVEVAVISEIISNLYK 516
Query: 518 SGVHAS---DIGIITPYAAQV-VLLKILRSKDDKLKNME----VSTVDGFQGREKEAIII 569
+G+++PY Q+ + + + K L + V +VDGFQG E++ III
Sbjct: 517 VSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFTLNVRSVDGFQGGEEDIIII 576
Query: 570 SMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTET 608
S VRSN +VGFL++R+R NVA+TRAR C V ET
Sbjct: 577 STVRSNGNGKVGFLNNRQRANVALTRARH-CLWVIGNET 614
Score = 48 (22.0 bits), Expect = 6.5e-28, Sum P(2) = 6.5e-28
Identities = 16/66 (24%), Positives = 30/66 (45%)
Query: 194 NSNLDHSQKDAISKALSSKN------VFMLHXXXXXXXXXXVVEIILQEVKRGSKILACA 247
++ L+ SQ+DAI L ++N V ++ V ++ +K K + CA
Sbjct: 55 STKLNSSQEDAILGCLETRNCTHKNSVKLIWGPPRTGKTKTVATLLFALLKLRCKTVVCA 114
Query: 248 ASNIAV 253
+N A+
Sbjct: 115 PTNTAI 120
>SGD|S000004422 [details] [associations]
symbol:SEN1 "Presumed helicase and subunit of the Nrd1
complex (Nrd1p-Nab3p-Sen1p)" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043144
"snoRNA processing" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA;IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IMP;IDA] [GO:0031126 "snoRNA
3'-end processing" evidence=IMP] [GO:0006378 "mRNA polyadenylation"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA;IMP] [GO:0016180 "snRNA processing"
evidence=IEA;IMP] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0035649 "Nrd1 complex" evidence=IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0045005
"maintenance of fidelity involved in DNA-dependent DNA replication"
evidence=IMP] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
InterPro:IPR024714 SGD:S000004422 GO:GO:0005524 GO:GO:0005634
GO:GO:0019904 GO:GO:0006378 EMBL:BK006945 GO:GO:0008033
eggNOG:COG1112 EMBL:U20939 EMBL:U21094 GO:GO:0006364 GO:GO:0006369
GO:GO:0031126 GO:GO:0043141 KO:K00088 RefSeq:NP_013536.3
GeneID:851152 KEGG:sce:YLR432W GO:GO:0016180 KO:K10706
RefSeq:NP_013534.3 GeneID:851150 KEGG:sce:YLR430W GO:GO:0035649
GO:GO:0032575 InterPro:IPR024481 PANTHER:PTHR10887:SF164
Pfam:PF12726 EMBL:M74589 PIR:S53416 ProteinModelPortal:Q00416
SMR:Q00416 DIP:DIP-881N IntAct:Q00416 MINT:MINT-427565
STRING:Q00416 PaxDb:Q00416 PeptideAtlas:Q00416 EnsemblFungi:YLR430W
CYGD:YLR430w GeneTree:ENSGT00580000081652 HOGENOM:HOG000246755
OMA:SAIIPLR OrthoDB:EOG4MPMZ6 NextBio:967924 Genevestigator:Q00416
GermOnline:YLR430W Uniprot:Q00416
Length = 2231
Score = 344 (126.2 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 117/347 (33%), Positives = 174/347 (50%)
Query: 293 DNSSLASDIRKEMKALNGKLLKTKDK-NTRREIQKELRTLSKEERKRQQLAVTDVIKNAD 351
D S L IR+ K +N +L + +D+ + + R L + + LAV+D+I
Sbjct: 1511 DISKLQLKIRELSKIIN-ELGRDRDEMREKNSVNYRNRDLDRRNAQAHILAVSDII---- 1565
Query: 352 VVLTTLTGAVSRKLDNTS--FDLVIIDEAAQALEIACWIAL-LKGSRCILAGDHLQLPPT 408
+TL+G+ L FD VIIDEA Q E++ I L G RCI+ GD QLPPT
Sbjct: 1566 --CSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPT 1623
Query: 409 VQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSG 468
V S A ++LF R+ + +L VQYRMH I + S + Y ++K P G
Sbjct: 1624 VLSGAASNFKYNQSLFVRMEK---NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGP-G 1679
Query: 469 V----KRT-SSTEPTL--LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVH 521
+ KR EP DI +E+ + S N E VA+ L + +
Sbjct: 1680 MDILNKRPWHQLEPLAPYKFFDIIS-GRQEQNAKTMSYTNMEEIRVAIELVDYLFRKFDN 1738
Query: 522 ASD----IGIITPYAAQVVLLK--ILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRS 574
D IGII+PY Q+ ++ R + K+++ +T+DGFQG+EKE I+IS VR+
Sbjct: 1739 KIDFTGKIGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRA 1798
Query: 575 N-SKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
+ +K VGFL D RRMNVA+TRA+ ++ +++ + LIE
Sbjct: 1799 DDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIE 1845
Score = 54 (24.1 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 235 QEVKRGSKILACAASNIAVDNI 256
+++ + KIL CA SN AVD I
Sbjct: 1398 EQLLKKQKILICAPSNAAVDEI 1419
>TAIR|locus:2126480 [details] [associations]
symbol:AT4G30100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009506 "plasmodesma"
evidence=IDA] GO:GO:0009506 EMBL:CP002687 EMBL:AL161576
GO:GO:0004519 eggNOG:COG1112 EMBL:AL078464 KO:K10706
InterPro:IPR026852 PANTHER:PTHR10887:SF27 HOGENOM:HOG000084788
ProtClustDB:CLSN2683158 IPI:IPI00535923 PIR:T08986
RefSeq:NP_194739.1 UniGene:At.31859 ProteinModelPortal:Q9SZW3
SMR:Q9SZW3 STRING:Q9SZW3 PaxDb:Q9SZW3 PRIDE:Q9SZW3
EnsemblPlants:AT4G30100.1 GeneID:829133 KEGG:ath:AT4G30100
TAIR:At4g30100 InParanoid:Q9SZW3 PhylomeDB:Q9SZW3
ArrayExpress:Q9SZW3 Genevestigator:Q9SZW3 Uniprot:Q9SZW3
Length = 1311
Score = 353 (129.3 bits), Expect = 2.2e-27, Sum P(3) = 2.2e-27
Identities = 106/281 (37%), Positives = 149/281 (53%)
Query: 335 ERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNT---SFDLVIIDEAAQALEIACWIALL 391
E R L + A++V TT++ + RKL + FD+V+IDEAAQA E+ L
Sbjct: 902 EEARASLEAS-FANEAEIVFTTVSSS-GRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLA 959
Query: 392 KGS-RCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIM 450
G+ RC+L GD QLP TV S A R+LFER L G T +LTVQYRMH I
Sbjct: 960 LGAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERF-QLAGCP-TLLLTVQYRMHPQIR 1017
Query: 451 NWSSKQLYNSK------IKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGE 504
++ S+ Y + + P + S L DI+ E + S N E
Sbjct: 1018 DFPSRYFYQGRLTDSESVSTAPDEIYYKDSVLKPYLFFDISH-GRESHRGGSVSYENIDE 1076
Query: 505 AEVAMA---HAKRLIQS-GVHASDIGIITPYAAQVVLLKILRSK---DDKLKNMEVSTVD 557
A + H +R ++S G +G+ITPY Q+ LKI D+L+ + ++TVD
Sbjct: 1077 ARFCVGVYLHLQRTLKSLGGGKVSVGVITPYKLQLKCLKIEFGNALSQDELQEIYINTVD 1136
Query: 558 GFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARR 598
FQG+E++ II+S VR+ S VGF++D RRMNVA+TRA+R
Sbjct: 1137 AFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRAKR 1176
Score = 40 (19.1 bits), Expect = 2.2e-27, Sum P(3) = 2.2e-27
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 155 ALIQLSKGVQNG---PAAGLIPVLFGEQKPTV 183
A QL+ +QN P+ P +GEQ PTV
Sbjct: 584 AFSQLNPQMQNAILKPSPEQFPN-YGEQTPTV 614
Score = 38 (18.4 bits), Expect = 2.2e-27, Sum P(3) = 2.2e-27
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRN 45
S+ E+V V PL+ E A++ ++ A N
Sbjct: 427 SMDEYVRVFEPLLFEECRAQLYSTWEELAEAN 458
>WB|WBGene00016566 [details] [associations]
symbol:eri-7 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0019079 "viral
genome replication" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR003593 SMART:SM00382 GO:GO:0000166 GO:GO:0000003
GO:GO:0017111 InterPro:IPR014001 SMART:SM00487 EMBL:FO080509
GeneTree:ENSGT00700000104572 PIR:T28788 RefSeq:NP_491374.2
ProteinModelPortal:O01976 SMR:O01976 EnsemblMetazoa:C41D11.7
GeneID:172047 KEGG:cel:CELE_C41D11.7 UCSC:C41D11.7.1 CTD:172047
WormBase:C41D11.7 InParanoid:O01976 OMA:NDEEMIN NextBio:873807
ArrayExpress:O01976 Uniprot:O01976
Length = 625
Score = 209 (78.6 bits), Expect = 7.5e-27, Sum P(3) = 7.5e-27
Identities = 46/107 (42%), Positives = 68/107 (63%)
Query: 498 STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL-KILRSKDDKLKNME---- 552
S N EA++A+ H +RL++ GV SDI IITPY Q L+ K++ + +
Sbjct: 389 SYANLAEAKIAIGHYQRLLKYGVQPSDIAIITPYKGQTSLVTKLMEEFGAETGYTDFVQT 448
Query: 553 -VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARR 598
+ TVD QG+E E +I +MVRSN +K +GF+S+ RR+NV +TRA+R
Sbjct: 449 TIGTVDSVQGKEYEVVIFTMVRSNPRKTMGFVSELRRLNVVITRAKR 495
Score = 177 (67.4 bits), Expect = 7.5e-27, Sum P(3) = 7.5e-27
Identities = 71/278 (25%), Positives = 127/278 (45%)
Query: 192 PFNSNLDHSQKDAISKALS-SKNVFMLHXXXXXXXXXXVVEIILQEVKRGSKILACAASN 250
PF SN Q+ AI AL+ ++ + + + ++ + +++ +++ A +
Sbjct: 64 PF-SN--EKQRTAIKMALNENRKLVCIQGPPGTGKTFTLTLLLCRLIQQKKQVVVLAPTR 120
Query: 251 IAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASD-IRKEMKAL- 308
A+ NI H L+ D + + D + +A++ +R KA
Sbjct: 121 EALANIRMMTKKTLKRMGIKVHEHALMDT--NEYRDV-INKSDRALMAAEEVRDLRKAFD 177
Query: 309 NGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA-VSRKLDN 367
NG++ + + E+R S R R ++ +VI N V T+ + V + +
Sbjct: 178 NGEITEN--------VLDEMRQ-SIINRVRNEVGA-EVIGNVRVAFATIGASFVDFVMKH 227
Query: 368 TSFD--LVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFE 425
FD L IIDEAAQ +E W A+ K R ++AGD QLP V + EA+ GL ++ +
Sbjct: 228 KKFDPCLCIIDEAAQVMEAQTWPAVYKMKRIVMAGDPKQLPALVFTDEAKAFGLQNSVMD 287
Query: 426 RLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK 463
R+ + + ML QYR + I WS+ Y++++K
Sbjct: 288 RILEKKNNFSWIMLENQYRSNAKIATWSNTCFYHNQLK 325
Score = 40 (19.1 bits), Expect = 7.5e-27, Sum P(3) = 7.5e-27
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 115 YRLKDSSITVAFDDIPEEGLNSPLRL 140
Y L+D+ ++ D+ E + P+ L
Sbjct: 26 YTLEDNPESLTLQDVLESHMTDPIEL 51
>UNIPROTKB|P51530 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0042645
"mitochondrial nucleoid" evidence=IDA] [GO:0043504 "mitochondrial
DNA repair" evidence=IDA] [GO:0006264 "mitochondrial DNA
replication" evidence=IDA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IDA] [GO:0045740 "positive regulation of DNA
replication" evidence=IDA] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=IDA] [GO:0006284 "base-excision repair"
evidence=IDA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=IDA] [GO:0005760
"gamma DNA polymerase complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000076 "DNA replication checkpoint"
evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IDA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000729 "DNA double-strand
break processing" evidence=IDA] [GO:0004518 "nuclease activity"
evidence=IDA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IDA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0000722 "telomere maintenance via recombination" evidence=TAS]
[GO:0000723 "telomere maintenance" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006271 "DNA strand elongation
involved in DNA replication" evidence=TAS] [GO:0032201 "telomere
maintenance via semi-conservative replication" evidence=TAS]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0032508 "DNA
duplex unwinding" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 Reactome:REACT_115566
GO:GO:0005654 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0042645 GO:GO:0000084 GO:GO:0016890
eggNOG:COG1112 GO:GO:0045740 GO:GO:0000722 GO:GO:0000729
GO:GO:0017108 Reactome:REACT_383 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:D42046 EMBL:AL136233
EMBL:BC041115 EMBL:BC053574 EMBL:BC063664 EMBL:BC111740
EMBL:BC028188 IPI:IPI00216142 IPI:IPI00816670 IPI:IPI00816801
PIR:T50697 RefSeq:NP_001073918.2 UniGene:Hs.532446
ProteinModelPortal:P51530 SMR:P51530 STRING:P51530
PhosphoSite:P51530 DMDM:119370373 PaxDb:P51530 PRIDE:P51530
Ensembl:ENST00000358410 Ensembl:ENST00000399179
Ensembl:ENST00000549829 GeneID:1763 KEGG:hsa:1763 UCSC:uc021prt.1
GeneCards:GC10M070173 HGNC:HGNC:2939 HPA:HPA037487 MIM:601810
neXtProt:NX_P51530 InParanoid:P51530 GenomeRNAi:1763 NextBio:7187
ArrayExpress:P51530 Bgee:P51530 CleanEx:HS_DNA2
Genevestigator:P51530 GermOnline:ENSG00000138346 GO:GO:0032201
Uniprot:P51530
Length = 1060
Score = 188 (71.2 bits), Expect = 8.6e-27, Sum P(3) = 8.6e-27
Identities = 44/128 (34%), Positives = 76/128 (59%)
Query: 495 EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVS 554
E+ N EA++ + +++G SDIGII PY Q+ ++ L ++ + +EV+
Sbjct: 907 EKGGVSNVTEAKLIVFLTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARS--IGMVEVN 964
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVG-FLSDRRRMNVAVTRARRQCCLVCDTETVSSDG 613
TVD +QGR+K +++S VRSN VG L D RR+NVA+TRA+ + L+ +++
Sbjct: 965 TVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNVAITRAKHKLILLGCVPSLNCYP 1024
Query: 614 FLKRLIEY 621
L++L+ +
Sbjct: 1025 PLEKLLNH 1032
Score = 185 (70.2 bits), Expect = 8.6e-27, Sum P(3) = 8.6e-27
Identities = 43/126 (34%), Positives = 68/126 (53%)
Query: 339 QQLAVTDVIKNADVVLTTLTGAVSRKLDNTS-FDLVIIDEAAQALEIACWIALLKGSRCI 397
+ LA+ + + N+ +++ T ++ + + FD I+DEA+Q + C L R +
Sbjct: 724 KSLALLEELYNSQLIVATTCMGINHPIFSRKIFDFCIVDEASQISQPICLGPLFFSRRFV 783
Query: 398 LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQL 457
L GDH QLPP V + EA G+ +LF+RL LTVQYRM+ IM+ S+K
Sbjct: 784 LVGDHQQLPPLVLNREARALGMSESLFKRLEQ--NKSAVVQLTVQYRMNSKIMSLSNKLT 841
Query: 458 YNSKIK 463
Y K++
Sbjct: 842 YEGKLE 847
Score = 64 (27.6 bits), Expect = 8.6e-27, Sum P(3) = 8.6e-27
Identities = 57/269 (21%), Positives = 103/269 (38%)
Query: 50 QKKGSTILNL-KCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPA 108
+K GS I NL + + G+ L FQ G +P D V++ + L A
Sbjct: 473 EKSGSCIGNLIRMEHVKIVCDGQYLHNFQCKHG-AIPVTNLMAGDRVIVSGEERSLF--A 529
Query: 109 LGQGVVYRLKDSSITVAFDD----IPEEGL------------NSPL-RLEKLA-NEVTYR 150
L +G V + +++T D +PE L ++PL L KL N +
Sbjct: 530 LSRGYVKEINMTTVTCLLDRNLSVLPESTLFRLDQEEKNCDIDTPLGNLSKLMENTFVSK 589
Query: 151 RMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALS 210
+++D +I + + ++P + K TV K N Q+ A+ K L
Sbjct: 590 KLRDLIIDFREPQFISYLSSVLP---HDAKDTVA---CILKGLNK----PQRQAMKKVLL 639
Query: 211 SKNVFMLHXXXXXXXXXXVVEIILQEVKRGSKILACAASNIAVDNIXXXXXXXXXXXXXX 270
SK+ ++ + ++ G +L + ++ AVDNI
Sbjct: 640 SKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGFLRL 699
Query: 271 GHPARLLPQVLESALDAQVLRGDN-SSLA 298
G ++ P + + + ++ R + SLA
Sbjct: 700 GQIQKVHPAI-QQFTEQEICRSKSIKSLA 727
Score = 39 (18.8 bits), Expect = 3.3e-24, Sum P(3) = 3.3e-24
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 295 SSLASDIRKEMKALNGKLLKTKDKNTRR 322
+S+AS IR +A+ + ++ D TR+
Sbjct: 128 TSIASSIRCMRRAVLSETFRSSDPATRQ 155
Score = 38 (18.4 bits), Expect = 4.2e-24, Sum P(3) = 4.2e-24
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 137 PLRLE--KLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVL-FGEQKP 181
PL L+ K +N + +R LS+ + P AGL+ L G+ P
Sbjct: 296 PLELKTGKESNSIEHRSQVVLYTLLSQERRADPEAGLLLYLKTGQMYP 343
>TAIR|locus:2135472 [details] [associations]
symbol:AT4G05540 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687 GO:GO:0004386
KO:K10706 IPI:IPI00530269 RefSeq:NP_567301.2 UniGene:At.54170
ProteinModelPortal:F4JGH5 SMR:F4JGH5 PRIDE:F4JGH5
EnsemblPlants:AT4G05540.1 GeneID:825906 KEGG:ath:AT4G05540
OMA:WVIGNER Uniprot:F4JGH5
Length = 689
Score = 334 (122.6 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 104/290 (35%), Positives = 148/290 (51%)
Query: 344 TDVIKNADVVLTTLTGAVSRKLDNT-SFDLVIIDEAAQALEIACWIAL-LKG-SRCILAG 400
T ++NA ++ T +GA + S D++++DEAAQ E AL L+G +L G
Sbjct: 404 TFCLQNAHIIFCTASGAAEMTAERAGSIDMLVVDEAAQLKECESVAALQLQGLHHAVLIG 463
Query: 401 DHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNS 460
D LQLP VQS EK R+LFERL D G + +L VQYRMH I + + + Y
Sbjct: 464 DELQLPAMVQSEVCEKAKFVRSLFERL-DSLGHK-KHLLNVQYRMHPSISLFPNMEFYGG 521
Query: 461 KIKAHPSGVKRTSSTEPTLL---------LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAH 511
KI + + + S+ + L I++ G EE D S N E V
Sbjct: 522 KIS--DAEIVKESTYQKRFLQGNMFGSFSFINV-GLGKEEFGDGH-SPKNMVEIAVVSEI 577
Query: 512 AKRLIQSGVHAS---DIGIITPYAAQVVLL--KI---LRSKDDKLKNMEVSTVDGFQGRE 563
L++ +G+I+PY AQV + +I S D L + V +VDGFQG E
Sbjct: 578 LTNLLKVSSETKTKMSVGVISPYKAQVSAIQERIGDKYTSVSDNLFTLNVRSVDGFQGGE 637
Query: 564 KEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG 613
++ IIIS VRSN +GFLS+R+R NVA+TRAR ++ + T+S G
Sbjct: 638 EDIIIISTVRSNCNGNIGFLSNRQRANVALTRARHCLWVIGNERTLSLSG 687
Score = 39 (18.8 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 36/165 (21%), Positives = 63/165 (38%)
Query: 194 NSNLDHSQKDAISKALSSK------NVFMLHXXXXXXXXXXVVEIILQEVKRGSKILACA 247
++NL+ SQ+ AI L ++ +V ++ V ++ + K + C
Sbjct: 106 SANLNSSQESAILACLETREIRDKTSVKLIWGPPGTGNTKTVATLLFALLSLSCKTVVCT 165
Query: 248 ASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKA 307
+N AV + H L + VL G+ + D R
Sbjct: 166 PTNTAVVAVASRLLALFKESSSTEHSTYGLGNI--------VLVGNRVRMGIDERGNDDL 217
Query: 308 LNGKLLKTKDKNTRREIQKELRTLSKE-ERKRQQLAVTDVIKNAD 351
LN L D+ ++ EL + S E ER + AV D+++NA+
Sbjct: 218 LNVFL---DDRISKLG---ELFSPSNEWERSLE--AVIDILENAE 254
>UNIPROTKB|F1PHA4 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006302 "double-strand break repair"
evidence=IEA] InterPro:IPR026121 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:AAEX03006816 EMBL:AAEX03006817 Ensembl:ENSCAFT00000031656
Uniprot:F1PHA4
Length = 2531
Score = 342 (125.4 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 105/338 (31%), Positives = 174/338 (51%)
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTT---LTGA 360
+ + L+ K+ K + R+E+ +++ + +K Q + + + + T+ L +
Sbjct: 2131 QRQELDEKIAKVSKE--RQELASKIKEVQGRPQKTQSIIILESHVICCTLSTSGGLLLES 2188
Query: 361 VSRKLDNTSFDLVIIDEAAQALEIACWIALL-KGSRCILAGDHLQLPPTVQSVEAEKKGL 419
R F VI+DEA Q+ E+ L+ + ++ IL GD QLPPTV S++A++ G
Sbjct: 2189 AFRGQGGVPFSCVIVDEAGQSCEVETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGY 2248
Query: 420 GRTLFERLADLYGDEVTS---------MLTVQYRMHEHIMNWSSKQLYNSKIKAH-PSGV 469
+++ R L D V LTVQYRMH I + S +YN +K + +
Sbjct: 2249 DQSMMARFYKLLEDNVEHNMIGRLPVLQLTVQYRMHPDICLFPSNYVYNRSLKTNRQTET 2308
Query: 470 KRTSSTEP--TLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQS---GVHASD 524
R SS P L+ D+ D E++D DS +N E ++ M K LI+ V +
Sbjct: 2309 NRCSSDWPFQPYLVFDVG--DGSERRDN-DSYVNVQEIKLVMEIIK-LIKDKRRDVTFRN 2364
Query: 525 IGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK-EVGF 582
IGIIT Y AQ ++ K L + D+ EV TVDGFQGR+K+ +I++ VR+N+ + +GF
Sbjct: 2365 IGIITHYKAQKTMIQKDLDKEFDRKGPAEVDTVDGFQGRQKDCVIVTCVRANAMQGSIGF 2424
Query: 583 LSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
L+ +R+NV +TRA+ ++ T+ + LI+
Sbjct: 2425 LASLQRLNVTITRAKYSLFILGHLRTLMENQHWNHLIQ 2462
Score = 48 (22.0 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 236 EVKRGSKILACAASNIAVDNI 256
++K+ +++L CA SN AVD +
Sbjct: 2020 KIKQ-NRVLVCAPSNAAVDEL 2039
Score = 40 (19.1 bits), Expect = 7.9e-26, Sum P(2) = 7.9e-26
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 130 PEEGLNSPLRLEKLANEVTYRRMKD 154
PE+ +N+ + L ++V +R KD
Sbjct: 2071 PEKSINNEVLKFSLDSQVNHRMKKD 2095
>UNIPROTKB|J3KPX5 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 OMA:EHESLCH ProteinModelPortal:J3KPX5
Ensembl:ENST00000399180 Uniprot:J3KPX5
Length = 1146
Score = 188 (71.2 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 44/128 (34%), Positives = 76/128 (59%)
Query: 495 EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVS 554
E+ N EA++ + +++G SDIGII PY Q+ ++ L ++ + +EV+
Sbjct: 993 EKGGVSNVTEAKLIVFLTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARS--IGMVEVN 1050
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVG-FLSDRRRMNVAVTRARRQCCLVCDTETVSSDG 613
TVD +QGR+K +++S VRSN VG L D RR+NVA+TRA+ + L+ +++
Sbjct: 1051 TVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNVAITRAKHKLILLGCVPSLNCYP 1110
Query: 614 FLKRLIEY 621
L++L+ +
Sbjct: 1111 PLEKLLNH 1118
Score = 185 (70.2 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 43/126 (34%), Positives = 68/126 (53%)
Query: 339 QQLAVTDVIKNADVVLTTLTGAVSRKLDNTS-FDLVIIDEAAQALEIACWIALLKGSRCI 397
+ LA+ + + N+ +++ T ++ + + FD I+DEA+Q + C L R +
Sbjct: 810 KSLALLEELYNSQLIVATTCMGINHPIFSRKIFDFCIVDEASQISQPICLGPLFFSRRFV 869
Query: 398 LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQL 457
L GDH QLPP V + EA G+ +LF+RL LTVQYRM+ IM+ S+K
Sbjct: 870 LVGDHQQLPPLVLNREARALGMSESLFKRLEQ--NKSAVVQLTVQYRMNSKIMSLSNKLT 927
Query: 458 YNSKIK 463
Y K++
Sbjct: 928 YEGKLE 933
Score = 64 (27.6 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 57/269 (21%), Positives = 103/269 (38%)
Query: 50 QKKGSTILNL-KCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPA 108
+K GS I NL + + G+ L FQ G +P D V++ + L A
Sbjct: 559 EKSGSCIGNLIRMEHVKIVCDGQYLHNFQCKHG-AIPVTNLMAGDRVIVSGEERSLF--A 615
Query: 109 LGQGVVYRLKDSSITVAFDD----IPEEGL------------NSPL-RLEKLA-NEVTYR 150
L +G V + +++T D +PE L ++PL L KL N +
Sbjct: 616 LSRGYVKEINMTTVTCLLDRNLSVLPESTLFRLDQEEKNCDIDTPLGNLSKLMENTFVSK 675
Query: 151 RMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALS 210
+++D +I + + ++P + K TV K N Q+ A+ K L
Sbjct: 676 KLRDLIIDFREPQFISYLSSVLP---HDAKDTVA---CILKGLNK----PQRQAMKKVLL 725
Query: 211 SKNVFMLHXXXXXXXXXXVVEIILQEVKRGSKILACAASNIAVDNIXXXXXXXXXXXXXX 270
SK+ ++ + ++ G +L + ++ AVDNI
Sbjct: 726 SKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGFLRL 785
Query: 271 GHPARLLPQVLESALDAQVLRGDN-SSLA 298
G ++ P + + + ++ R + SLA
Sbjct: 786 GQIQKVHPAI-QQFTEQEICRSKSIKSLA 813
Score = 39 (18.8 bits), Expect = 4.4e-24, Sum P(3) = 4.4e-24
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 295 SSLASDIRKEMKALNGKLLKTKDKNTRR 322
+S+AS IR +A+ + ++ D TR+
Sbjct: 214 TSIASSIRCMRRAVLSETFRSSDPATRQ 241
Score = 38 (18.4 bits), Expect = 5.6e-24, Sum P(3) = 5.6e-24
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 137 PLRLE--KLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVL-FGEQKP 181
PL L+ K +N + +R LS+ + P AGL+ L G+ P
Sbjct: 382 PLELKTGKESNSIEHRSQVVLYTLLSQERRADPEAGLLLYLKTGQMYP 429
>UNIPROTKB|H0Y455 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 EMBL:AL136233 HGNC:HGNC:2939
ProteinModelPortal:H0Y455 PRIDE:H0Y455 Ensembl:ENST00000440722
Bgee:H0Y455 Uniprot:H0Y455
Length = 375
Score = 188 (71.2 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 44/128 (34%), Positives = 76/128 (59%)
Query: 495 EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVS 554
E+ N EA++ + +++G SDIGII PY Q+ ++ L ++ + +EV+
Sbjct: 229 EKGGVSNVTEAKLIVFLTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARS--IGMVEVN 286
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVG-FLSDRRRMNVAVTRARRQCCLVCDTETVSSDG 613
TVD +QGR+K +++S VRSN VG L D RR+NVA+TRA+ + L+ +++
Sbjct: 287 TVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNVAITRAKHKLILLGCVPSLNCYP 346
Query: 614 FLKRLIEY 621
L++L+ +
Sbjct: 347 PLEKLLNH 354
Score = 185 (70.2 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 43/126 (34%), Positives = 68/126 (53%)
Query: 339 QQLAVTDVIKNADVVLTTLTGAVSRKLDNTS-FDLVIIDEAAQALEIACWIALLKGSRCI 397
+ LA+ + + N+ +++ T ++ + + FD I+DEA+Q + C L R +
Sbjct: 46 KSLALLEELYNSQLIVATTCMGINHPIFSRKIFDFCIVDEASQISQPICLGPLFFSRRFV 105
Query: 398 LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQL 457
L GDH QLPP V + EA G+ +LF+RL LTVQYRM+ IM+ S+K
Sbjct: 106 LVGDHQQLPPLVLNREARALGMSESLFKRLEQ--NKSAVVQLTVQYRMNSKIMSLSNKLT 163
Query: 458 YNSKIK 463
Y K++
Sbjct: 164 YEGKLE 169
>UNIPROTKB|G5EA02 [details] [associations]
symbol:C4orf21 "Uncharacterized protein C4orf21"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
EMBL:CH471057 InterPro:IPR018838 Pfam:PF10382 UniGene:Hs.713663
RefSeq:NP_060862.3 UniGene:Hs.380346 GeneID:55345 KEGG:hsa:55345
CTD:55345 GenomeRNAi:55345 NextBio:59679 EMBL:AC106864
EMBL:AC023886 PRIDE:G5EA02 Ensembl:ENST00000505019 HGNC:HGNC:25654
OMA:NTYESSG ArrayExpress:G5EA02 Bgee:G5EA02 Uniprot:G5EA02
Length = 2104
Score = 348 (127.6 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 121/405 (29%), Positives = 197/405 (48%)
Query: 242 KILACAASNIAVDNIXXXXXXXXXXXXXX-GHPARLLPQVLESALDAQVLRGDNSSLASD 300
K+L +++N+AVD + G ++ +L +L A S S+
Sbjct: 1690 KLLISSSTNVAVDRVLLGLLSLGFENFIRVGSVRKIAKPILPYSLHA------GSENESE 1743
Query: 301 IRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVT-DVIKNADVVLTTLTG 359
KE+ AL K+ T E R ++ ++ +L ++K VV T
Sbjct: 1744 QLKELHAL------MKEDLTPTE-----RVYVRKSIEQHKLGTNRTLLKQVRVVGVTCAA 1792
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACW--IALLKGSRCILAGDHLQLPPTVQSVEA-EK 416
+++ F +V++DE +Q E A IA + + IL GD QLPPT+Q +A +
Sbjct: 1793 CPFPCMNDLKFPVVVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHE 1852
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTE 476
GL +TLF+RL L G + +L QYR H I ++ Y + + ++R+ E
Sbjct: 1853 NGLEQTLFDRLC-LMGHKPI-LLRTQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLE 1910
Query: 477 --PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ 534
PTL ++ G + E+ ++S N EA + + LI SG+ S IG+IT Y +Q
Sbjct: 1911 WLPTLCFYNVKGLEQIER---DNSFHNVAEATFTLKLIQSLIASGIAGSMIGVITLYKSQ 1967
Query: 535 VVLLKILRSKDD----KLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
+ L L S D +K ++VSTVD FQG EKE II+S VR+ ++VGF+ +RMN
Sbjct: 1968 MYKLCHLLSAVDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRT---RQVGFIDSEKRMN 2024
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLS-GSEY 634
VA+TR +R +V + + + R+I++ E + L ++Y
Sbjct: 2025 VALTRGKRHLLIVGNLACLRKNQLWGRVIQHCEGREDGLQHANQY 2069
Score = 38 (18.4 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 1 MEGRKTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASR-NLDTAQKKGSTILNL 59
M+ ++ E ++ L PLI L + + + S + N +T + GS +LNL
Sbjct: 1044 MKKSRSLENENLQRLSLLSRTQVPLITLPR-TDGPPDLDSHSYMINSNTYESSGSPMLNL 1102
>UNIPROTKB|F1S0U6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
KO:K10706 GeneTree:ENSGT00580000081652 CTD:23064 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:CU550727 EMBL:CU914573
RefSeq:XP_003353743.1 UniGene:Ssc.45527 Ensembl:ENSSSCT00000006294
GeneID:100511239 KEGG:ssc:100511239 Uniprot:F1S0U6
Length = 2661
Score = 340 (124.7 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 105/338 (31%), Positives = 173/338 (51%)
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTT---LTGA 360
+ + L+GK+ + + R+E+ +++ + +K Q + + + T+ L +
Sbjct: 2102 QRRELDGKIAEVSKE--RQELASKIKEVQGRPQKTQNTIILESHIICCTLSTSGGLLLES 2159
Query: 361 VSRKLDNTSFDLVIIDEAAQALEIACWIALL-KGSRCILAGDHLQLPPTVQSVEAEKKGL 419
R F VI+DEA Q+ E+ L+ + ++ +L GD QLPPTV S++A+ G
Sbjct: 2160 AFRGQGGVPFSCVIVDEAGQSCEVETLTPLIHRCNKLVLVGDPKQLPPTVISMKAQDYGY 2219
Query: 420 GRTLFERLADLYGDEVTS---------MLTVQYRMHEHIMNWSSKQLYNSKIKAHP-SGV 469
+++ R L + V LTVQYRMH I + S +YN +K + +
Sbjct: 2220 DQSMMARFYKLLEENVEHNVIGRLPILQLTVQYRMHPDICLFPSNYIYNRNLKTNSLTEA 2279
Query: 470 KRTSSTEP--TLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQS---GVHASD 524
R SS P L+ D+ D E++D DS +N E ++ M K LI+ V +
Sbjct: 2280 SRCSSDWPFQPYLVFDVG--DGSERRDN-DSYVNVQEIKLVMEIIK-LIKDKRRDVTFRN 2335
Query: 525 IGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSN-SKKEVGF 582
IGIIT Y AQ L+ K L + D+ EV TVDGFQGR+K+ +I++ VR+ S+ +GF
Sbjct: 2336 IGIITHYKAQKTLIQKDLDKEFDRKGPAEVDTVDGFQGRQKDCVIVTCVRAKTSQGSIGF 2395
Query: 583 LSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
L+ +R+NV +TRA+ ++ T+ + +LIE
Sbjct: 2396 LASLQRLNVTITRAKYSLFILGHLRTLRENDHWNQLIE 2433
Score = 48 (22.0 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 236 EVKRGSKILACAASNIAVDNI 256
++K+ +++L CA SN AVD +
Sbjct: 1991 KIKQ-NRVLVCAPSNAAVDEL 2010
Score = 40 (19.1 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 130 PEEGLNSPLRLEKLANEVTYRRMKD 154
PE+ +N+ + L ++V +R KD
Sbjct: 2042 PEKSINNEVLRFSLDSQVNHRMKKD 2066
>UNIPROTKB|E1C4T7 [details] [associations]
symbol:Gga.18015 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654
GO:GO:0006302 GeneTree:ENSGT00580000081652 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:AADN02026516 IPI:IPI00575045
Ensembl:ENSGALT00000005801 Uniprot:E1C4T7
Length = 2503
Score = 342 (125.4 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 96/283 (33%), Positives = 154/283 (54%)
Query: 370 FDLVIIDEAAQALEIACWIALL-KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
F VI+DEA Q+ E+ I L+ + ++ +L GD QLPPT++S++A++ G G++L RL
Sbjct: 2198 FSCVIVDEAGQSCEVETLIPLIHRCNKLVLVGDPRQLPPTIKSIKAQEYGYGQSLMARLQ 2257
Query: 429 DLYGDEVTS---------MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTE-P- 477
++V + LTVQYRMH I + S +Y+ +K + + S+E P
Sbjct: 2258 RHLEEQVQNNLLRRLPVVQLTVQYRMHPDICLFPSSYIYDKTLKTDKATEENRCSSEWPF 2317
Query: 478 -TLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQS--GVHASDIGIITPYAAQ 534
L+ D+ D E++D+ DS N E ++ + + + + + IGIITPY+AQ
Sbjct: 2318 QPYLVFDVG--DGHEERDK-DSFSNPQEVKLVLEIIRTIKEKRKDLGLRRIGIITPYSAQ 2374
Query: 535 VVLLKILRSKDDKLKNM---EVSTVDGFQGREKEAIIISMVRSNSKK-EVGFLSDRRRMN 590
KI D KN EV TVD FQGREK+ II++ VR+NS K +GFL+ +R+N
Sbjct: 2375 KK--KIQEELDRVFKNNSPGEVDTVDAFQGREKDCIIVTCVRANSSKGSIGFLASLQRLN 2432
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSE 633
V +TRAR ++ +T+ + +LI+ + + S+
Sbjct: 2433 VTITRARFSLFILGRLKTLMENKDWNKLIQDAQRRGAIIKTSD 2475
Score = 161 (61.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 49/169 (28%), Positives = 89/169 (52%)
Query: 279 QVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKR 338
Q ++ALD ++ D S + + + L ++L + +E Q +L + KE R
Sbjct: 2104 QKKKAALDEKL---DMLSRQRAMHRCYRFLRSQMLDDEIGRLSKERQ-QLASQLKEVRGH 2159
Query: 339 QQLAVTDVIKNADVVLTTLTGAVSRKLDNT-------SFDLVIIDEAAQALEIACWIALL 391
Q TD+I +D++ TL+ + L++ F VI+DEA Q+ E+ I L+
Sbjct: 2160 SQKVQTDIILESDIICCTLSTSGGGLLESAFWRQGLDPFSCVIVDEAGQSCEVETLIPLI 2219
Query: 392 -KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSML 439
+ ++ +L GD QLPPT++S++A++ G G++L RL ++V + L
Sbjct: 2220 HRCNKLVLVGDPRQLPPTIKSIKAQEYGYGQSLMARLQRHLEEQVQNNL 2268
Score = 44 (20.5 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 236 EVKRGSKILACAASNIAVDNI 256
++K+ ++ L CA SN A+D +
Sbjct: 2020 KIKQ-NRFLVCAPSNAAIDEL 2039
Score = 38 (18.4 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEMKALN 309
P ++ +++ G N+S S I KE+ L+
Sbjct: 943 PLAVKCEPSERMVSGHNTSTNSQIDKELSKLS 974
>POMBASE|SPBC16D10.04c [details] [associations]
symbol:dna2 "DNA replication endonuclease-helicase
Dna2" species:4896 "Schizosaccharomyces pombe" [GO:0000084 "S phase
of mitotic cell cycle" evidence=IC] [GO:0000723 "telomere
maintenance" evidence=IGI] [GO:0000784 "nuclear chromosome,
telomeric region" evidence=ISO] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISO] [GO:0004518 "nuclease activity"
evidence=IMP] [GO:0004527 "exonuclease activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=IMP] [GO:0031860 "telomeric 3' overhang
formation" evidence=IMP] [GO:0042162 "telomeric DNA binding"
evidence=IDA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IMP] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IC] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0071932 "replication fork reversal" evidence=IMP]
InterPro:IPR026851 PomBase:SPBC16D10.04c InterPro:IPR014808
Pfam:PF08696 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0051539
GO:GO:0043596 GO:GO:0004003 GO:GO:0004527 GO:GO:0000084
eggNOG:COG1112 GO:GO:0000784 GO:GO:0042162 GO:GO:0031573
GO:GO:0017108 GO:GO:0043137 GO:GO:0031860 GO:GO:0043142
PANTHER:PTHR10887:SF14 EMBL:AF144384 EMBL:AB028014 EMBL:AF075169
PIR:T39568 PIR:T47242 PIR:T51292 RefSeq:NP_596499.2 STRING:Q9URU2
GeneID:2540148 OrthoDB:EOG47H8Z4 NextBio:20801284 GO:GO:0071932
InterPro:IPR022765 Pfam:PF01930 Uniprot:Q9URU2
Length = 1397
Score = 205 (77.2 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 51/127 (40%), Positives = 76/127 (59%)
Query: 501 NEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGF 559
N EA + ++ GV S IGII+ Y +QV LL K L+S +E++TVD +
Sbjct: 1214 NHTEAFLIEQAVSSFLERGVKQSSIGIISIYKSQVELLSKNLKS----FTEIEINTVDRY 1269
Query: 560 QGREKEAIIISMVRSNSKKEVG-FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRL 618
QGR+K+ I+IS VRSNSK VG L D R+NVA++RA+ +C + T+SS + L
Sbjct: 1270 QGRDKDIILISFVRSNSKNLVGELLRDWHRLNVALSRAKVKCIMFGSLSTLSSSNIVSHL 1329
Query: 619 IEYFEEH 625
++ E++
Sbjct: 1330 LKLLEKN 1336
Score = 165 (63.1 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 39/115 (33%), Positives = 62/115 (53%)
Query: 348 KNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPP 407
++ +V + G + FD IIDEA+Q C L + +L GDH QLPP
Sbjct: 1037 EDPQIVACSSLGVYHSIFNKRKFDYCIIDEASQIPLPICLGPLQLAEKFVLVGDHYQLPP 1096
Query: 408 TVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKI 462
V++ K GL +LF+ L++ + + VT+ L +QYRM+E I + SS+ +Y +
Sbjct: 1097 LVKNSRTSKDGLSLSLFKLLSEKHPEAVTT-LRLQYRMNEDINSLSSELIYGGNL 1150
Score = 65 (27.9 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 26/119 (21%), Positives = 45/119 (37%)
Query: 180 KPTVLKKDIAFKP-FNSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVK 238
KP P F L+ Q A+ K ++++ ++ + +I +
Sbjct: 914 KPPKFCNSALIDPEFLKCLNEDQITALKKCHAAEHYSLILGMPGTGKTTTISSLIRSLLA 973
Query: 239 RGSKILACAASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSL 297
+ KIL + +++AVDNI G P ++ P V E L D +SL
Sbjct: 974 KKKKILLTSFTHLAVDNILIKLKGCDSTIVRLGSPHKIHPLVKEFCLTEGTTFDDLASL 1032
Score = 39 (18.8 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 25/97 (25%), Positives = 40/97 (41%)
Query: 394 SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT-SMLTVQYRMH-EHIMN 451
S C+L G ++ ++EAE +L + + L VT S ++ H+
Sbjct: 239 SSCLLKGSDTEIDEDDFALEAEDLAALDSLERQYSQLPNSTVTASAKDIEKTAKVNHV-- 296
Query: 452 WSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGCD 488
Q Y S KA + T + EP L +D A C+
Sbjct: 297 GGDLQSYCSATKASDA----TINEEPVNLALDKA-CN 328
>FB|FBgn0030170 [details] [associations]
symbol:CG2990 species:7227 "Drosophila melanogaster"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=ISS] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:AE014298 GO:GO:0006200
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
KO:K10742 GeneTree:ENSGT00550000074852 OMA:EHESLCH
FlyBase:FBgn0030170 EMBL:BT088860 RefSeq:NP_727386.1
UniGene:Dm.17561 SMR:Q8IRL9 STRING:Q8IRL9
EnsemblMetazoa:FBtr0071415 GeneID:31934 KEGG:dme:Dmel_CG2990
UCSC:CG2990-RB InParanoid:Q8IRL9 GenomeRNAi:31934 NextBio:776017
Uniprot:Q8IRL9
Length = 1100
Score = 192 (72.6 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 49/131 (37%), Positives = 74/131 (56%)
Query: 501 NEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQ 560
N EA + M + L++SG AS IG+I PY AQV L K L SK D ++E +TVD FQ
Sbjct: 944 NYCEAGIVMHLLRYLLKSGYEASRIGVIAPYRAQVELFKKLASKLDT--DLECNTVDQFQ 1001
Query: 561 GREKEAIIISMVRSNS-------KKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG 613
GR+K II S ++ +E L D+RR+ VA+TRA+ + L+ D + + G
Sbjct: 1002 GRDKNLIIYSCSKTGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLGDIKCLEQYG 1061
Query: 614 FLKRLIEYFEE 624
++L ++ +
Sbjct: 1062 PFRQLFKHIPD 1072
Score = 179 (68.1 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 47/143 (32%), Positives = 75/143 (52%)
Query: 324 IQKELRTLSKEERKRQQLAVTDVIK---NADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQ 380
I K+L +S+E + V ++ K +V T G FD I+DEA Q
Sbjct: 716 IHKQLEEISEERLTKDCKTVEELEKALGQPSIVGVTCLGCGHPLFQRRQFDYCIVDEATQ 775
Query: 381 ALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLT 440
L+ L+ S+ +L GD QLPP V+S EA ++G TLF+RL D ++ T++L+
Sbjct: 776 VLQPTVLRPLIHCSKFVLVGDPEQLPPIVRSKEARQRGADETLFQRL-D--SEKATAVLS 832
Query: 441 VQYRMHEHIMNWSSKQLYNSKIK 463
+QYRM++ I +++ Y +K
Sbjct: 833 LQYRMNKTITRLANELTYGGDLK 855
Score = 61 (26.5 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 51/251 (20%), Positives = 109/251 (43%)
Query: 18 FVSVMAPLIDLEKEAEISAS-ITSGASRNLDTAQKKGSTILNLKCVDAQTGLM--GK--- 71
+V L+ LE++ +S + S +++ +K+G I +LK V Q ++ G+
Sbjct: 451 YVQHWCGLLALEEQHNRQSSHVRSFWTKDPAEREKEGIAIRHLKLVKGQEVILEEGRYRQ 510
Query: 72 TL-LEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD-DI 129
TL L ++ L F + VV+ + + L A+ G + ++ + + + D+
Sbjct: 511 TLELGEEADPSRDLSLSGFDLGEYVVIS-STSRL---AVAAGFIVSIEARRLDLRLERDL 566
Query: 130 PEEGLNSPLRLEKLANE--VTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKD 187
+ ++K ++ T+ ++ LS+G + +I ++ VL K
Sbjct: 567 SQRYSEETFIIDKHDSQSFATFNFTNLGML-LSEGERFQELRDIIVAKKPPEQHKVLPKI 625
Query: 188 IAFK--PFNSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGSKILA 245
I K P NL+ Q++A +AL++ + ++ +V ++ G +L
Sbjct: 626 ILTKGAPILLNLNKVQQNAALRALTTSSHLLIKGLPGTGKTQTLVALVRLLHLLGKSVLI 685
Query: 246 CAASNIAVDNI 256
A ++ AVDN+
Sbjct: 686 TAQTHSAVDNL 696
>UNIPROTKB|Q7Z333 [details] [associations]
symbol:SETX "Probable helicase senataxin" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IC] [GO:0003678 "DNA helicase
activity" evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IDA] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR026121 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0008219 GO:GO:0006396 GO:GO:0006302 Orphanet:803
eggNOG:COG1112 GO:GO:0003678 KO:K10706 EMBL:AL159997 Orphanet:64753
EMBL:AY362728 EMBL:BX537849 EMBL:BX538166 EMBL:CR749249
EMBL:AL353701 EMBL:BC032600 EMBL:BC032622 EMBL:BC078166
EMBL:BC106017 EMBL:BC137350 EMBL:AB014525 EMBL:AK001456
EMBL:AK022902 IPI:IPI00142538 IPI:IPI00646645 IPI:IPI00719643
RefSeq:NP_055861.3 UniGene:Hs.460317 ProteinModelPortal:Q7Z333
SMR:Q7Z333 IntAct:Q7Z333 STRING:Q7Z333 PhosphoSite:Q7Z333
DMDM:296453021 PaxDb:Q7Z333 PRIDE:Q7Z333 Ensembl:ENST00000224140
Ensembl:ENST00000372169 Ensembl:ENST00000393220
Ensembl:ENST00000436441 GeneID:23064 KEGG:hsa:23064 UCSC:uc004cbj.3
UCSC:uc004cbk.3 UCSC:uc010mzt.3 CTD:23064 GeneCards:GC09M135136
HGNC:HGNC:445 HPA:HPA024105 MIM:602433 MIM:606002 MIM:608465
neXtProt:NX_Q7Z333 PharmGKB:PA24751 HOVERGEN:HBG108476
InParanoid:Q7Z333 OMA:RLINHFE OrthoDB:EOG4XWFWX PhylomeDB:Q7Z333
ChiTaRS:SETX GenomeRNAi:23064 NextBio:44145 ArrayExpress:Q7Z333
Bgee:Q7Z333 Genevestigator:Q7Z333 GermOnline:ENSG00000107290
PANTHER:PTHR10887:SF15 Uniprot:Q7Z333
Length = 2677
Score = 332 (121.9 bits), Expect = 6.7e-26, Sum P(2) = 6.7e-26
Identities = 101/326 (30%), Positives = 167/326 (51%)
Query: 315 TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTT---LTGAVSRKLDNTSFD 371
+K R+E+ +++ + +K Q + + + + T+ L + R F
Sbjct: 2117 SKVSKERQELASKIKEVQGRPQKTQSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFS 2176
Query: 372 LVIIDEAAQALEIACWIALL-KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
VI+DEA Q+ EI L+ + ++ IL GD QLPPTV S++A++ G +++ R L
Sbjct: 2177 CVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCRL 2236
Query: 431 YGDEVTS---------MLTVQYRMHEHIMNWSSKQLYNSKIKAH-PSGVKRTSSTEP--T 478
+ V LTVQYRMH I + S +YN +K + + R SS P
Sbjct: 2237 LEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAIRCSSDWPFQP 2296
Query: 479 LLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLI--QSGVHASDIGIITPYAAQVV 536
L+ D+ D E++D DS +N E ++ M K + + V +IGIIT Y AQ
Sbjct: 2297 YLVFDVG--DGSERRDN-DSYINVQEIKLVMEIIKLIKDKRKDVSFRNIGIITHYKAQKT 2353
Query: 537 LL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNS-KKEVGFLSDRRRMNVAVT 594
++ K L + D+ EV TVD FQGR+K+ +I++ VR+NS + +GFL+ +R+NV +T
Sbjct: 2354 MIQKDLDKEFDRKGPAEVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTIT 2413
Query: 595 RARRQCCLVCDTETVSSDGFLKRLIE 620
RA+ ++ T+ + +LI+
Sbjct: 2414 RAKYSLFILGHLRTLMENQHWNQLIQ 2439
Score = 52 (23.4 bits), Expect = 6.7e-26, Sum P(2) = 6.7e-26
Identities = 19/67 (28%), Positives = 31/67 (46%)
Query: 273 PARLLPQVLESALDAQVLRGDNS--SLASDIRKEMKALNGKLLKTKDKNTRREIQKELRT 330
P ++ VL A D + GDN+ + D++ E L G LK KN E ++
Sbjct: 649 PMKVQDSVLIKA-D-NTIEGDNNEQNYIKDVKLEDHLLAGSCLKQSSKNIFTERAEDQIK 706
Query: 331 LSKEERK 337
+S ++K
Sbjct: 707 ISTRKQK 713
Score = 48 (22.0 bits), Expect = 1.9e-24, Sum P(3) = 1.9e-24
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 236 EVKRGSKILACAASNIAVDNI 256
++K+ +++L CA SN AVD +
Sbjct: 1997 KIKQ-NRVLVCAPSNAAVDEL 2016
Score = 46 (21.3 bits), Expect = 2.8e-25, Sum P(2) = 2.8e-25
Identities = 14/53 (26%), Positives = 29/53 (54%)
Query: 300 DIRKEMKALNGKLLKTKDKN---TRREIQKELRTLSKEERKRQQLA---VTDV 346
D RK+ K ++ + L ++ T +E+Q + + K ++ R++L+ TDV
Sbjct: 1321 DTRKKTKLISPQNLSVRNNKKLLTSQELQMQRQIRPKSQKNRRRLSDCESTDV 1373
Score = 39 (18.8 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 130 PEEGLNSPLRLEKLANEVTYRRMKD 154
PE+ +NS + L ++V +R K+
Sbjct: 2048 PEKSINSEVLKFSLDSQVNHRMKKE 2072
Score = 37 (18.1 bits), Expect = 1.9e-24, Sum P(3) = 1.9e-24
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 126 FDDIPEEGLNSPLR 139
F+ + +E LNSP R
Sbjct: 1756 FETVAQEWLNSPNR 1769
>UNIPROTKB|Q4S102 [details] [associations]
symbol:GSTENG00025786001 "Chromosome 5 SCAF14773, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0006284 "base-excision repair" evidence=ISS] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] [GO:0005760 "gamma DNA polymerase complex"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0006284 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0017108 GO:GO:0043137 GO:GO:0043142 GO:GO:0006264
PANTHER:PTHR10887:SF14 HOVERGEN:HBG081456 EMBL:CAAE01014773
ProteinModelPortal:Q4S102 STRING:Q4S102 Uniprot:Q4S102
Length = 1043
Score = 204 (76.9 bits), Expect = 6.7e-26, Sum P(3) = 6.7e-26
Identities = 55/165 (33%), Positives = 91/165 (55%)
Query: 322 REIQKELRTLSKEE-RKR--QQLAVTDVIKNADVVL-TTLTGAVSRKLDNTSFDLVIIDE 377
+++ ++ ++E RK+ L+ + + N ++V+ TT G FD I+DE
Sbjct: 710 QKVHPDILPYTEESARKKGVHTLSELEQLYNKELVVGTTCLGIRHPLFTRRRFDFCIVDE 769
Query: 378 AAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS 437
A+Q + C L R +L GDH QLPP VQ+ EA G+ +LF+RL +L+ D V
Sbjct: 770 ASQISQPVCVGPLFYARRFVLVGDHQQLPPIVQNQEARSLGMDESLFKRL-ELHRDAVVQ 828
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLI 482
L VQYRM+ IM+ S+ +Y +++ G +RT+++ TL L+
Sbjct: 829 -LNVQYRMNRQIMSLSNSLMYEGRLEC---GSERTATSLITLPLL 869
Score = 168 (64.2 bits), Expect = 6.7e-26, Sum P(3) = 6.7e-26
Identities = 42/131 (32%), Positives = 72/131 (54%)
Query: 495 EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVS 554
E+ N EA + LI++G DIG+I PY Q+ + L +EV+
Sbjct: 907 EQGGISNHTEAALIHKLLLLLIKAGCKPGDIGVIAPYRQQLRTISGLLQAS-AFTGVEVN 965
Query: 555 TVDGFQGREKEAIIISMVRSNSKK-EVG-FLSDRRRMNVAVTRARRQCCLVCDTETVSSD 612
TVD +QGR+K I++S VRS +++ +G L D RR+NVA+TRA+ + ++ T+
Sbjct: 966 TVDRYQGRDKSLILLSFVRSTAEEGPLGELLKDWRRLNVAITRAKSKLLMLGSATTLRRY 1025
Query: 613 GFLKRLIEYFE 623
+++L+ + +
Sbjct: 1026 APVEKLLNHLQ 1036
Score = 55 (24.4 bits), Expect = 6.7e-26, Sum P(3) = 6.7e-26
Identities = 30/148 (20%), Positives = 55/148 (37%)
Query: 134 LNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPF 193
L P + L++ V + KDA+ + KG P G ++P +
Sbjct: 579 LRPPEFISSLSS-VLPKEAKDAVANILKGWYPAPPH----CRHGGRRPPAHLVHVG---- 629
Query: 194 NSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGSKILACAASNIAV 253
+ L+ QK A+ K L SK+ ++ + ++ G +L + ++ AV
Sbjct: 630 GAGLNKPQKQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVRILHACGFSVLLTSYTHSAV 689
Query: 254 DNIXXXXXXXXXXXXXXGHPARLLPQVL 281
DNI G ++ P +L
Sbjct: 690 DNILLKLKRFRVGFLRLGQGQKVHPDIL 717
Score = 43 (20.2 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 14/64 (21%), Positives = 32/64 (50%)
Query: 83 VLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEK 142
+L ++ D ++LK + +G LGQG ++ + + ++G+++ LE+
Sbjct: 680 LLTSYTHSAVDNILLKLKRFRVGFLRLGQG--QKVHPDILPYTEESARKKGVHTLSELEQ 737
Query: 143 LANE 146
L N+
Sbjct: 738 LYNK 741
>ZFIN|ZDB-GENE-070424-144 [details] [associations]
symbol:si:ch211-183d5.1 "si:ch211-183d5.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR026855 ZFIN:ZDB-GENE-070424-144
GO:GO:0004386 PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AL935128 IPI:IPI00492493 Ensembl:ENSDART00000144897
Uniprot:F1QAI5
Length = 517
Score = 317 (116.6 bits), Expect = 9.0e-26, P = 9.0e-26
Identities = 104/299 (34%), Positives = 155/299 (51%)
Query: 302 RKEMKALNGKLLKTKDKNTRREIQKEL-RTLSKEE----RKRQQLAVTDVIKNADVVLTT 356
++E++ + L K +N E K L + LS ++ RK + A I+ DVVL T
Sbjct: 126 KEELRDITLMYLVRKPENPFSEEIKALEKNLSVDQIDNYRKLLKKANQHEIEKYDVVLCT 185
Query: 357 LTGAVSRKLDNT-SFDLVIIDEAAQALEIACWIALLKGS--RCILAGDHLQLPPTVQSVE 413
+ A+ +L F ++IDE A A E +I L+ + + +L GDH Q+ P VQ
Sbjct: 186 CSSALKPELREVMDFRQILIDECAMATEPEAFIPLVSHNPQQIVLLGDHQQIRPIVQCGH 245
Query: 414 AEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-- 471
+ KG+ ++LFER DL +ML QYRMH I ++ S + Y+ K+K +G +R
Sbjct: 246 VKNKGMEKSLFERYMDL-----ANMLDTQYRMHAEICSFPSDEFYDGKLK---TGAERGP 297
Query: 472 ----TSSTEPTLLLID-IAGCDME----EKKDEEDSTMNEGEAEVAMAHAKRLI-QSGVH 521
S EPT +L I G ++ +K E+S N EAE A+ A LI QSGV
Sbjct: 298 CCLLNKSKEPTAMLFGHIEGKEVSLVVSTEKGNENSMANTEEAEQAVCVADLLIKQSGVS 357
Query: 522 ASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEV 580
I I+TPY AQV +K+ K + ++N+ V TV QG E +I+S VRS S ++
Sbjct: 358 PEHIAILTPYNAQVSEIKMTLEKKN-VRNVTVCTVMKSQGSEWPYVIVSTVRSCSTSDI 415
Score = 167 (63.8 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 51/148 (34%), Positives = 80/148 (54%)
Query: 492 KKDEEDSTMNEGEAEVAMAHAKRLI-QSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN 550
+K E+S N EAE A+ A LI QSGV I I+TPY AQV +K+ K + ++N
Sbjct: 327 EKGNENSMANTEEAEQAVCVADLLIKQSGVSPEHIAILTPYNAQVSEIKMTLEKKN-VRN 385
Query: 551 MEVSTVDGFQGREKEAIIISMVRSNSK----------------KEVGFLSDRRRMNVAVT 594
+ V TV QG E +I+S VRS S K +GF++D ++NVA+T
Sbjct: 386 VTVCTVMKSQGSEWPYVIVSTVRSCSTSDIQAYRVRPHKAWLGKRLGFVTDANQVNVAIT 445
Query: 595 RARRQCCLVCDTETVSSDGFLKRLIEYF 622
RA+ C++ +++ + RL++++
Sbjct: 446 RAQDGLCILGNSDLLRCCELWDRLLDHY 473
>CGD|CAL0002159 [details] [associations]
symbol:DNA2 species:5476 "Candida albicans" [GO:0000784
"nuclear chromosome, telomeric region" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0031860 "telomeric 3' overhang
formation" evidence=IEA] [GO:0000733 "DNA strand renaturation"
evidence=IEA] [GO:0000706 "meiotic DNA double-strand break
processing" evidence=IEA] [GO:0001302 "replicative cell aging"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IEA]
[GO:0017108 "5'-flap endonuclease activity" evidence=IEA]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
CGD:CAL0002159 Pfam:PF08696 eggNOG:COG1112 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
InterPro:IPR022765 Pfam:PF01930 EMBL:AACQ01000161 EMBL:AACQ01000157
RefSeq:XP_712310.1 RefSeq:XP_712454.1 ProteinModelPortal:Q59RL2
STRING:Q59RL2 GeneID:3645932 GeneID:3646072 KEGG:cal:CaO19.1192
KEGG:cal:CaO19.8783 Uniprot:Q59RL2
Length = 1426
Score = 214 (80.4 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 48/133 (36%), Positives = 77/133 (57%)
Query: 497 DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTV 556
+ +N EA + L+ GV +IG+++ Y AQ L +L+ + LK++E+ T
Sbjct: 1249 EMVINTKEALLIQQIVNALVHGGVKEDEIGVMSFYRAQ---LSVLKKNLNNLKDLEILTA 1305
Query: 557 DGFQGREKEAIIISMVRSNSKKEVG-FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFL 615
D +QGR+KE IIIS+VRSN +K G + + RR+NVA TRA+ + ++ T+S++
Sbjct: 1306 DQYQGRDKECIIISLVRSNERKFAGDLMKEYRRLNVATTRAKTKLIILGSRFTLSTNELT 1365
Query: 616 KRLIEYFEEHAEY 628
K I+Y E Y
Sbjct: 1366 KTFIDYLENEKWY 1378
Score = 154 (59.3 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 42/111 (37%), Positives = 61/111 (54%)
Query: 369 SFDLVIIDEAAQALEIACWIALLK-GSRCILAGDHLQLPPTVQSVEAE-KKGLGRTLFER 426
SFD I+DEA+Q + + + L+ + ++ GDH QL P V + K+ L R+LF
Sbjct: 1094 SFDYCIVDEASQ-ITLPVSLGPLRFAKKFVMVGDHDQLQPLVTHPDKRVKQELSRSLFSL 1152
Query: 427 LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEP 477
LA + D V S LT QYRM+ IMN + +YN+K+K V + S P
Sbjct: 1153 LAKEHPDSV-SHLTYQYRMNSDIMNVCNTLIYNNKLKCGSEQVAQNSLKIP 1202
Score = 61 (26.5 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 26/118 (22%), Positives = 46/118 (38%)
Query: 159 LSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLH 218
LS + NG A+ L ++ +KPT P + Q A+ K S+ + ++
Sbjct: 931 LSLFLPNG-ASQLRKLVVDLEKPTFTASSWEI-PDAETFNPDQIAALKKVFSADDYSLIV 988
Query: 219 XXXXXXXXXXVVEIILQEVKRGSKILACAASNIAVDNIXXXXXXXXXXXXXXGHPARL 276
+ ++I V + +L + +N AVDNI G+P R+
Sbjct: 989 GMPGTGKTTVIAQLIKVLVAQRKSVLLTSYTNSAVDNILLKLKDLDIEFLRIGYPQRV 1046
Score = 37 (18.1 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 401 DHLQLPPTVQSVEAEK 416
D+L+LPP V++ ++
Sbjct: 689 DNLKLPPLVKNSNCDR 704
>TAIR|locus:2166163 [details] [associations]
symbol:AT5G37140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00534313 RefSeq:NP_198530.1 UniGene:At.55175
ProteinModelPortal:F4K5W4 SMR:F4K5W4 PRIDE:F4K5W4
EnsemblPlants:AT5G37140.1 GeneID:833686 KEGG:ath:AT5G37140
OMA:TEAKYEH ArrayExpress:F4K5W4 Uniprot:F4K5W4
Length = 692
Score = 322 (118.4 bits), Expect = 2.8e-25, Sum P(2) = 2.8e-25
Identities = 104/282 (36%), Positives = 145/282 (51%)
Query: 344 TDVIKNADVVLTTLTGAVSRKLDNT-SFDLVIIDEAAQALEIACWIAL-LKGSR-CILAG 400
T ++NAD++ T +GA T S DL+++DEAAQ E AL L G R +L G
Sbjct: 358 TFCLQNADIIFCTASGAADMNPIRTGSVDLLVVDEAAQLKECESVAALQLSGLRHAVLIG 417
Query: 401 DHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNS 460
D LQLP V + EA+ GR+LFERL L G +L VQYRMH I + +K+ Y
Sbjct: 418 DELQLPAMVHN-EAK---FGRSLFERLV-LLGHN-KHLLNVQYRMHPSISRFPNKEFYGG 471
Query: 461 KIKAHPSGVKRTSSTEPTLLLIDIAGCDM-------EEKKDEEDSTMNEGEAEVAMAHAK 513
+IK + V+ S + L ++ G EE+ + S N E V
Sbjct: 472 RIK-DAANVQE-SIYQKRFLQGNMFGSFSFINVGRGEEEFGDGHSPKNMVEVAVISEIIS 529
Query: 514 RLIQSGVHAS---DIGIITPYAAQV-VLLKILRSKDDKLKNM---EVSTVDGFQGREKEA 566
L + +G+++PY QV + + +K L + V +VDGFQG E++
Sbjct: 530 NLFKVSSERRIKMSVGVVSPYKGQVRAIQERTTNKYSSLSGLFTLNVRSVDGFQGGEEDI 589
Query: 567 IIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTET 608
IIIS VRSN +VGFL++R+R NVA+TRAR C V ET
Sbjct: 590 IIISTVRSNGNGKVGFLNNRQRANVALTRARH-CLWVIGNET 630
Score = 39 (18.8 bits), Expect = 2.8e-25, Sum P(2) = 2.8e-25
Identities = 15/66 (22%), Positives = 26/66 (39%)
Query: 194 NSNLDHSQKDAISKALSSKNVFMLHXXXX------XXXXXXVVEIILQEVKRGSKILACA 247
++ L+ SQ+ AI L +N H V ++ +K K + CA
Sbjct: 71 SAKLNSSQEAAILSCLKIRNCNHKHSVKLIWGPPGTGKTKTVATLLFCLLKLSCKTVVCA 130
Query: 248 ASNIAV 253
+N A+
Sbjct: 131 PTNTAI 136
>TAIR|locus:2152627 [details] [associations]
symbol:AT5G37030 species:3702 "Arabidopsis thaliana"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] EMBL:CP002688 GO:GO:0004519 KO:K10706
IPI:IPI00540124 RefSeq:NP_198519.1 UniGene:At.55172
ProteinModelPortal:F4K5V7 SMR:F4K5V7 PRIDE:F4K5V7
EnsemblPlants:AT5G37030.1 GeneID:833673 KEGG:ath:AT5G37030
Uniprot:F4K5V7
Length = 638
Score = 319 (117.4 bits), Expect = 3.0e-25, Sum P(2) = 3.0e-25
Identities = 107/321 (33%), Positives = 163/321 (50%)
Query: 309 NGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNT 368
N K ++ KD + R + + R +SK ++ L+ ++ + ++ L + K N
Sbjct: 293 NQKRMRIKDTDYLRNVFLDHR-ISK--LRKLFLSTCGWKQSLESIIDLLENTET-KTGN- 347
Query: 369 SFDLVIIDEAAQALEIACWIAL-LKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFER 426
+++++DEAAQ E AL L G R IL GD QLP V + + EK GR+LFER
Sbjct: 348 -IEVLVVDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNDQCEKAKFGRSLFER 406
Query: 427 LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTL---LLID 483
L L G + +L VQYRMH I + K+ Y +IK + V+ + + L +
Sbjct: 407 LV-LLGHK-KHLLDVQYRMHPSISRFPYKEFYGGRIK-DAANVQESIYQKRFLQGNMFGS 463
Query: 484 IAGCDMEEKKDE---EDSTMNEGEAEVAMAHAKRLIQSGVHAS---DIGIITPYAAQV-V 536
+ ++ K+E DS N E V L + +G+ITPY QV
Sbjct: 464 FSFINVGRGKEEFGDGDSPKNMVEVAVVSEIISNLFKVSRERKMKMSVGVITPYKGQVRA 523
Query: 537 LLKILRSKDDKLKN----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVA 592
+ + +R K L + V +VDGFQG E++ IIIS VRSNS +VGFLS+R+R NVA
Sbjct: 524 IQERIRDKYSSLSGELFTVNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLSNRQRANVA 583
Query: 593 VTRARRQCCLVCDTETVSSDG 613
+TRAR ++ + T++ G
Sbjct: 584 LTRARHCLWVIGNESTLARSG 604
Score = 40 (19.1 bits), Expect = 3.0e-25, Sum P(2) = 3.0e-25
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 194 NSNLDHSQKDAISKALSSKNVFMLHXXXXX---XXXXXVVEIILQEVKRGSKILACAASN 250
+S L+ SQ+ AI L +++ + V ++L +K K + CA +N
Sbjct: 201 SSKLNSSQEAAILSCLETRDSNHKNSVKLIWGPLKTKTVATLLLVLLKLRCKTVVCAPTN 260
Query: 251 IAV 253
A+
Sbjct: 261 TAI 263
>UNIPROTKB|F1NWZ8 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0000076
"DNA replication checkpoint" evidence=IEA] [GO:0000729 "DNA
double-strand break processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0005634 GO:GO:0006284 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0017108 GO:GO:0043137 GO:GO:0005760
GO:GO:0043142 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AADN02028013 GeneTree:ENSGT00550000074852 OMA:EHESLCH
IPI:IPI00584167 Ensembl:ENSGALT00000006429 ArrayExpress:F1NWZ8
Uniprot:F1NWZ8
Length = 1009
Score = 220 (82.5 bits), Expect = 7.6e-25, Sum P(3) = 7.6e-25
Identities = 54/172 (31%), Positives = 89/172 (51%)
Query: 322 REIQKELRTLSKEE--RKRQQLAVTDV--IKNADVVLTTLTGAVSRKLD-NTSFDLVIID 376
+++ ++R ++EE R + +VTD+ + N+ V+ T ++ + FD I+D
Sbjct: 721 QKVHPDIRKFTEEEICRSKSIKSVTDLEELYNSQPVVATACMGINHPIFVQKQFDFCIVD 780
Query: 377 EAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT 436
EA+Q + C L R +L GDH QLPP VQ+ EA G+ +LF+RL
Sbjct: 781 EASQISQPICLGPLFCSKRFVLVGDHQQLPPLVQNSEARDLGMSESLFKRLEQ--NQNAV 838
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGCD 488
LTVQYRM+ IM+ S+K +Y K++ V ++ P L ++ + D
Sbjct: 839 VQLTVQYRMNSKIMSLSNKLVYEGKLECGSEKVSNATANLPNLKMLKLEFAD 890
Score = 141 (54.7 bits), Expect = 7.6e-25, Sum P(3) = 7.6e-25
Identities = 32/89 (35%), Positives = 54/89 (60%)
Query: 495 EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVS 554
E+ N EA++ I++G SDIGII+PY Q+ ++ L ++ K +EV+
Sbjct: 921 EKGGVCNVTEAKLVFFLTTLFIKAGCRPSDIGIISPYRHQLKVITDLMARL-KENRVEVN 979
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVGFL 583
T+D +QGR+K II+S VR+++ + +G L
Sbjct: 980 TIDKYQGRDKSIIIVSFVRNSNDENLGAL 1008
Score = 54 (24.1 bits), Expect = 7.6e-25, Sum P(3) = 7.6e-25
Identities = 49/267 (18%), Positives = 101/267 (37%)
Query: 50 QKKGSTILNLKCVD-AQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPA 108
+K G + N+ VD Q G+ L FQ G V A+ VVV LG
Sbjct: 490 EKAGDCVGNMIRVDQVQEVSEGQYLHSFQRKNGAVPGANLLVGDRVVVSGEENGLLG--- 546
Query: 109 LGQGVVYRLKDSSITVAFD-DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGP 167
L G V + + I+ ++ + ++ RL+ + + + LSK +++ P
Sbjct: 547 LATGYVREISATKISCLLGRNLSKLPESTTFRLDHEEGDCS---IGVPFENLSKLMKDSP 603
Query: 168 AAG-LIPVLFGEQKPTVLK----------KDIAFKPFNSNLDHSQKDAISKALSSKNVFM 216
+ L ++ KP ++ K+ +L+ QK A+ + L S++ +
Sbjct: 604 VSEKLRNLIIDFHKPRFIQHLSSVLPPEAKEAVASILKGSLNKPQKQAMKQVLLSRDYTL 663
Query: 217 LHXXXXXXXXXXVVEIILQEVKRGSKILACAASNIAVDNIXXXXXXXXXXXXXXGHPARL 276
+ + ++ G +L + ++ AVDNI G ++
Sbjct: 664 IVGMPGTGKTTTICALVRILSACGFSVLLTSFTHTAVDNILLKLAKFKVGFLRLGRAQKV 723
Query: 277 LPQVLESALDAQVLRGDNSSLASDIRK 303
P + + + ++ R + +D+ +
Sbjct: 724 HPDIRKFT-EEEICRSKSIKSVTDLEE 749
Score = 50 (22.7 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 27/124 (21%), Positives = 57/124 (45%)
Query: 103 DLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYR-RMKDALIQLSK 161
DLG + + + RL+ + V + + +NS ++ L+N++ Y +++ ++S
Sbjct: 820 DLG---MSESLFKRLEQNQNAVVQLTV-QYRMNS--KIMSLSNKLVYEGKLECGSEKVSN 873
Query: 162 GVQNGPAAGLIPVLFGEQKPTVLKKDIA-FKP---FNSNL----DHSQKDAISKALSSKN 213
N P ++ + F + T LK+ + KP N+ +H++K + +K
Sbjct: 874 ATANLPNLKMLKLEFADASKTWLKEVLEPDKPVCFLNTEKVPAPEHTEKGGVCNVTEAKL 933
Query: 214 VFML 217
VF L
Sbjct: 934 VFFL 937
>SGD|S000000978 [details] [associations]
symbol:ECM32 "DNA dependent ATPase/DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003678
"DNA helicase activity" evidence=IDA] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0006449 "regulation of translational
termination" evidence=IMP] [GO:0005844 "polysome" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] SGD:S000000978 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 GO:GO:0003723 EMBL:BK006939 GO:GO:0005844
eggNOG:COG1112 GeneTree:ENSGT00700000104467 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 EMBL:U18922 GO:GO:0003724 PIR:S30862
RefSeq:NP_011103.1 ProteinModelPortal:P32644 SMR:P32644
DIP:DIP-5404N IntAct:P32644 MINT:MINT-499764 STRING:P32644
PaxDb:P32644 PeptideAtlas:P32644 EnsemblFungi:YER176W GeneID:856923
KEGG:sce:YER176W CYGD:YER176w HOGENOM:HOG000094475 OMA:KDTPRGT
OrthoDB:EOG4P8JS8 NextBio:983389 Genevestigator:P32644
GermOnline:YER176W GO:GO:0006449 Uniprot:P32644
Length = 1121
Score = 209 (78.6 bits), Expect = 8.9e-25, Sum P(2) = 8.9e-25
Identities = 108/403 (26%), Positives = 177/403 (43%)
Query: 172 IPVLFGEQKPTVLKKDIAFK---PFNSN-LDHSQKDAISKALSSKNVFMLHXXXXXXXXX 227
I +L G QKP K+I F F+S+ L+ SQK A+ L++ ++ +L
Sbjct: 624 IDLLLG-QKPI---KEIYFDNRLKFSSDKLNRSQKTAVEHVLNN-SITILQGPPGTGKTS 678
Query: 228 XVVEIILQEVKR--GSKILACAASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESAL 285
+ EII+Q ++R IL AASNIA+DNI P + ++L
Sbjct: 679 TIEEIIIQVIERFHAFPILCVAASNIAIDNIAEKIME--------NRPQIKILRILSKKK 730
Query: 286 DAQVLRGDNSSLASDIRKEM--KALNGKLLKTKDKNTRRE-IQKELRTLSKEERKRQQLA 342
+ Q D+ L + K L+ + +K R E I K T +E+ R
Sbjct: 731 EQQY--SDDHPLGEICLHNIVYKNLSPDMQVVANKTRRGEMISKSEDTKFYKEKNR---- 784
Query: 343 VTD-VIKNADVVLTTLTGAVSRKLDNTS-FDLVIIDEAAQALEIACWIAL-LKGSR-CIL 398
VT+ V+ + ++ TT A R+L +VI+DEA Q+ E + + L L G R +
Sbjct: 785 VTNKVVSQSQIIFTTNIAAGGRELKVIKECPVVIMDEATQSSEASTLVPLSLPGIRNFVF 844
Query: 399 AGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLY 458
GD QL + E +LFER+ + ML QYRMH I + K++Y
Sbjct: 845 VGDEKQLSSFSNIPQLET-----SLFERVLSNGTYKNPLMLDTQYRMHPKISEFPIKKIY 899
Query: 459 NSKIKAHPSGVKRT-SSTEPTLLLIDI-AGCDMEEKKDEED----STMNEGEA-EVAMAH 511
N ++K + ++ + L G + + + D + N+ E E+
Sbjct: 900 NGELKDGVTDEQKAWPGVQHPLFFYQCDLGPESRVRSTQRDIVGFTYENKHECVEIVKII 959
Query: 512 AKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVS 554
++ V +IG+ITPY+AQ LL + +K+ + ++S
Sbjct: 960 QILMLDKKVPLEEIGVITPYSAQRDLLSDILTKNVVINPKQIS 1002
Score = 162 (62.1 bits), Expect = 8.9e-25, Sum P(2) = 8.9e-25
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 548 LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTE 607
+ + V+TVD FQG EK II S VR+N++ ++GFL D+RR+NVA+TRA+ +V +
Sbjct: 1033 INGLHVATVDSFQGHEKSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHGLIVVGNKN 1092
Query: 608 TV-SSDGFLKRLIEYFEE 624
+ D K I Y EE
Sbjct: 1093 VLRKGDPLWKDYITYLEE 1110
Score = 40 (19.1 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 88 KFGTHDVVVLKPNKA--DLGSPALGQGVVYRLKDSSITVAFDDI 129
K ++ V+ P A DL S L + VV K S+ +D+I
Sbjct: 967 KVPLEEIGVITPYSAQRDLLSDILTKNVVINPKQISMQQEYDEI 1010
>UNIPROTKB|E1BAS6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:DAAA02032276 EMBL:DAAA02032274 EMBL:DAAA02032275
IPI:IPI00842535 Ensembl:ENSBTAT00000042924 Uniprot:E1BAS6
Length = 2662
Score = 322 (118.4 bits), Expect = 3.1e-24, Sum P(3) = 3.1e-24
Identities = 101/338 (29%), Positives = 173/338 (51%)
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTT---LTGA 360
+ + L+GK+ + + R+E+ +++ + +K Q + + + + T+ L A
Sbjct: 2098 QRQELDGKIARVSKE--RQELASKIKEVQGRPQKTQSIIILESHIICCTLSTSGGLLLEA 2155
Query: 361 VSRKLDNTSFDLVIIDEAAQALEIACWIALL-KGSRCILAGDHLQLPPTVQSVEAEKKGL 419
R F VI+DEA Q+ E+ L+ + ++ +L GD QLPPTV SV+A+ G
Sbjct: 2156 AFRGQGGVPFSCVIVDEAGQSCEVETLTPLIHRCNKLVLVGDPKQLPPTVISVKAQDYGY 2215
Query: 420 GRTLFERLADLYGDEVTS---------MLTVQYRMHEHIMNWSSKQLYNSKIKAHP-SGV 469
+++ R L + V LT+QYRMH I + S +Y+ ++ + +
Sbjct: 2216 DQSMMARFHKLLEESVEHNMIGRLPVLQLTIQYRMHPDICLFPSSYIYDGILRTNRGTET 2275
Query: 470 KRTSSTEP--TLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQS---GVHASD 524
R SS P L+ D+ D E++D DS +N E ++ M K LI+ V +
Sbjct: 2276 SRCSSDWPFQPYLVFDVG--DGLERRDN-DSYVNVQEIKLVMELIK-LIKDKRRDVTFRN 2331
Query: 525 IGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK-EVGF 582
IGIIT Y AQ ++ K L + D+ EV TVD FQGR+K+ +I++ VR+N+ + +GF
Sbjct: 2332 IGIITHYKAQKTMIQKDLDKEFDRKGAAEVDTVDAFQGRQKDCVIVTCVRANATQGSIGF 2391
Query: 583 LSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
L+ +R+NV +TRA+ ++ T+ + LI+
Sbjct: 2392 LASLQRLNVTITRAKYSLFILGHLRTLVENRHWYHLIQ 2429
Score = 48 (22.0 bits), Expect = 3.1e-24, Sum P(3) = 3.1e-24
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 236 EVKRGSKILACAASNIAVDNI 256
++K+ +++L CA SN AVD +
Sbjct: 1987 KIKQ-NRVLVCAPSNAAVDEL 2006
Score = 46 (21.3 bits), Expect = 3.1e-24, Sum P(3) = 3.1e-24
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 5 KTKEKQSAVSLQEF--VSVMAPLID-LEKE-AEISASITSGASRNLDTAQ--KKGSTILN 58
+TK + S+ S++EF + V P EK AE +S + +N D + KG+ N
Sbjct: 1142 RTKPRSSSTSVEEFCEIEVKKPKRRRYEKPIAEDPLRPSSSSVKNEDQSDILNKGNLSKN 1201
Query: 59 -LKCVDAQT 66
K VDA++
Sbjct: 1202 DFKGVDARS 1210
Score = 40 (19.1 bits), Expect = 2.1e-23, Sum P(3) = 2.1e-23
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 130 PEEGLNSPLRLEKLANEVTYRRMKD 154
PE+ +N+ + L ++V +R KD
Sbjct: 2038 PEKSINNEVLKFSLDSQVNHRMKKD 2062
Score = 38 (18.4 bits), Expect = 2.1e-23, Sum P(3) = 2.1e-23
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 150 RRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
R +K + Q S V PA + P + E+ + KK
Sbjct: 593 RNIKFKVPQCSTFVDLNPACKMPPASYKEESEQIGKK 629
>WB|WBGene00001016 [details] [associations]
symbol:dna-2 species:6239 "Caenorhabditis elegans"
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA;IDA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0006259 "DNA
metabolic process" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005634 GO:GO:0009792
eggNOG:COG1112 GO:GO:0017108 GO:GO:0000014 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OMA:EHESLCH GO:GO:0043141 EMBL:Z50070
PIR:T22132 RefSeq:NP_496515.1 ProteinModelPortal:Q20371 SMR:Q20371
STRING:Q20371 PaxDb:Q20371 PRIDE:Q20371 EnsemblMetazoa:F43G6.1a
GeneID:174809 KEGG:cel:CELE_F43G6.1 UCSC:F43G6.1a CTD:174809
WormBase:F43G6.1a HOGENOM:HOG000016745 InParanoid:Q20371
NextBio:885596 ArrayExpress:Q20371 Uniprot:Q20371
Length = 1105
Score = 191 (72.3 bits), Expect = 9.2e-24, Sum P(2) = 9.2e-24
Identities = 47/135 (34%), Positives = 78/135 (57%)
Query: 493 KDEEDSTM-NEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNM 551
+D E M N+GEA++ ++ + SGV +IG+++ Y QV ++ + + D+ +
Sbjct: 968 EDGEGGGMCNDGEAKLISELCQQFVMSGVKPHEIGVMSAYRRQVDHIRGILNSDE----L 1023
Query: 552 EVSTVDGFQGREKEAIIISMV-RSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS 610
EV+T+D +QGREK II S+ +NS K+ L D RR+NVA+TRAR++ +V +
Sbjct: 1024 EVNTIDSYQGREKRVIIWSLTWTNNSTKKSELLKDERRVNVALTRARQKLVVVGCKNSAE 1083
Query: 611 SDGFLKRLIEYFEEH 625
+ L R + E H
Sbjct: 1084 TIPVLFRFSQLIENH 1098
Score = 171 (65.3 bits), Expect = 9.2e-24, Sum P(2) = 9.2e-24
Identities = 56/183 (30%), Positives = 93/183 (50%)
Query: 296 SLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQ---LAVTDVIKNADV 352
++ + + KE+ A K+L+ ++ ++ K++ +K E + + AV V+K +
Sbjct: 744 NILTKLTKEVAA--EKILRLGSSSSIKDDIKKMTLKAKLENETSEEYYAAVRKVMKTTPI 801
Query: 353 VLTTLTGAVSRKL--DNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQ 410
V T V R+L FD+VI+DEA+ LE L ++ +L GD QL P V
Sbjct: 802 VACTCHH-VPRELLFSYRHFDVVIVDEASMVLEPLLLPVLATSNKFVLVGDCKQLTPLVV 860
Query: 411 SVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK 470
S +A+++G G + E+L + V S LT QYRM+ I SSK Y +++ V
Sbjct: 861 SRKAKQEGAGISTMEKLQQSHPGVVVS-LTSQYRMNREISVLSSKLFYENRLICGNESVS 919
Query: 471 RTS 473
R+S
Sbjct: 920 RSS 922
Score = 91 (37.1 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 52/268 (19%), Positives = 108/268 (40%)
Query: 51 KKGSTILNLKCVDAQTGLMGKTLLEFQST--KGDVLPAHKFGTHDVVVLKPNKADLGSPA 108
++G+ + +L V + K ++ F K P + G DV +L NK + A
Sbjct: 537 EEGTCLSDLHPVSEEMSNSQKIIISFSRKFLKSSNTPTFRPG--DVCLLS-NKKHI---A 590
Query: 109 LGQGVVYRLKDSS--ITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNG 166
+G ++ + D + ++ D + +P L+K + T+ L+ L + + G
Sbjct: 591 IGFALIDEVSDDQQIVKISTDKTIKSRYEAPFHLDKYTSMSTHSTTLGNLVYLLQNDEIG 650
Query: 167 PA-----AGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHXXX 221
L+P + + L I + L++ Q+ A+ AL++++ FM+
Sbjct: 651 KRLRNILVDLLPPIIMDATGFNLTPAIKKIIIKAKLNNEQRKAVVHALATED-FMMVEGL 709
Query: 222 XXXXXXXVVEIILQ-EVKRGSKILACAASNIAVDNIXXXXXXXXXXXXXX--GHPARLLP 278
++ +++Q V K+L A ++ AVDNI G + +
Sbjct: 710 PGSGKTTLISVLIQCLVATNKKVLLAAFTHSAVDNILTKLTKEVAAEKILRLGSSSSIKD 769
Query: 279 QVLESALDAQVLRGDNSSLASDIRKEMK 306
+ + L A++ + + +RK MK
Sbjct: 770 DIKKMTLKAKLENETSEEYYAAVRKVMK 797
>TAIR|locus:2018561 [details] [associations]
symbol:AT1G65810 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0048451 "petal formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
EMBL:CP002684 GO:GO:0004386 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI01019905 RefSeq:NP_176757.1
UniGene:At.52388 ProteinModelPortal:F4IBK8 SMR:F4IBK8 PRIDE:F4IBK8
EnsemblPlants:AT1G65810.1 GeneID:842892 KEGG:ath:AT1G65810
OMA:DSEINKR ArrayExpress:F4IBK8 Uniprot:F4IBK8
Length = 1050
Score = 297 (109.6 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 109/319 (34%), Positives = 163/319 (51%)
Query: 311 KLLKTKDKNTRR--EIQKELRTLSKEERKRQQLAVTDVIKNA--DVVLTTLTGAVSRKLD 366
KL T D+N R + + L ++S + ++ ++ K + L T + S +L
Sbjct: 489 KLKDTGDENDSRTQDCLEMLTSISMSIKLPDFISKFELQKLCLDNAYLLFCTASSSARLH 548
Query: 367 NTS-FDLVIIDEAAQALEIACWIAL-LKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTL 423
+S L++IDEAAQ E I L L+G IL GD QLP ++S A + LGR+L
Sbjct: 549 MSSPIQLLVIDEAAQLKECESAIPLQLRGLQHAILIGDEKQLPAMIKSNIASEADLGRSL 608
Query: 424 FERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTE--PTLL- 480
FERL L G +L +QYRMH I + +++ Y+ KI PS R+ + P +
Sbjct: 609 FERLV-LLGHN-KQLLNMQYRMHPSISIFPNREFYDMKILDAPSVRLRSYEKKFLPEKMY 666
Query: 481 ----LIDIA-GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLI----QSGVHASDIGIITPY 531
I+IA G E+ E S+ N E V +L ++G S +G+I+PY
Sbjct: 667 GPYSFINIAYG---REQFGEGYSSKNLVEVSVVAEIVSKLYSVSRKTGRTIS-VGVISPY 722
Query: 532 AAQVVLLKIL---RSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
AQV ++ + + + V +VDGFQG E++ IIIS VRSN +GFLS+++R
Sbjct: 723 KAQVFAIQERIGEKYNTEGTFTVSVRSVDGFQGGEEDIIIISTVRSNGNGAIGFLSNQQR 782
Query: 589 MNVAVTRARRQCCLVCDTE 607
NVA+TRAR C + E
Sbjct: 783 TNVALTRAR-YCLWILGNE 800
Score = 57 (25.1 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 197 LDHSQKDAISKALSSK------NVFMLHXXXXXXXXXXVVEIILQEVKRGSKILACAASN 250
L+ SQ+DAI + L +K N+ ++ ++L +K + L CA +N
Sbjct: 267 LNSSQEDAILRCLEAKSCNHSNNIKLIWGPPGTGKTKTTSVLLLNFLKMRCRTLTCAPTN 326
Query: 251 IAV 253
IAV
Sbjct: 327 IAV 329
>UNIPROTKB|D4AEB3 [details] [associations]
symbol:Setx "Protein Setx" species:10116 "Rattus
norvegicus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 RGD:1565575 GO:GO:0005737
GO:GO:0005654 GO:GO:0006302 KO:K10706 GeneTree:ENSGT00580000081652
CTD:23064 OMA:RLINHFE OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15
IPI:IPI00476851 RefSeq:XP_342401.3 ProteinModelPortal:D4AEB3
PRIDE:D4AEB3 Ensembl:ENSRNOT00000017984 GeneID:362096
KEGG:rno:362096 NextBio:678646 ArrayExpress:D4AEB3 Uniprot:D4AEB3
Length = 2647
Score = 317 (116.6 bits), Expect = 4.4e-23, Sum P(2) = 4.4e-23
Identities = 96/320 (30%), Positives = 163/320 (50%)
Query: 321 RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTT---LTGAVSRKLDNTSFDLVIIDE 377
R+E+ +++ + ++ Q + + + T+ L + R F VI+DE
Sbjct: 2100 RQELASKIKEVQGRPQRAQNTIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVDE 2159
Query: 378 AAQALEIACWIALL-KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT 436
A Q+ E+ L+ + ++ +L GD QLPPTV S++A++ G +++ R L + V
Sbjct: 2160 AGQSCEVETLSPLIHRCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMARFCKLLEENVE 2219
Query: 437 S---------MLTVQYRMHEHIMNWSSKQLYNSKIKAHP-SGVKRTSSTEP--TLLLIDI 484
LT+QYRMH I + S +YN +K + + R SS P L+ D+
Sbjct: 2220 QNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLKTNRLTETIRCSSEWPFQPYLVFDV 2279
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHAS--DIGIITPYAAQVVLL-KIL 541
D E++D DS +N E ++ M K + + S +IGIIT Y AQ ++ K L
Sbjct: 2280 G--DGSEQRDN-DSYINVQEIKLVMEIIKLIKEKRKDISFRNIGIITHYKAQKTMIQKDL 2336
Query: 542 RSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK-EVGFLSDRRRMNVAVTRARRQC 600
+ DK EV TVD FQGR+K+ II++ VR+++ + +GFL+ +R+NV +TRA+
Sbjct: 2337 EKEFDKKGPAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKYSL 2396
Query: 601 CLVCDTETVSSDGFLKRLIE 620
++ T+ + LI+
Sbjct: 2397 FILGHLRTLMENQHWYELIQ 2416
Score = 48 (22.0 bits), Expect = 2.2e-22, Sum P(4) = 2.2e-22
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 236 EVKRGSKILACAASNIAVDNI 256
++K+ +++L CA SN AVD +
Sbjct: 1974 KIKQ-NRVLVCAPSNAAVDEL 1993
Score = 41 (19.5 bits), Expect = 4.4e-23, Sum P(2) = 4.4e-23
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 130 PEEGLNSPLRLEKLANEVTYRRMKD 154
PE+ +N+ + L ++V++R KD
Sbjct: 2025 PEKSINTEVLKFSLDSQVSHRMKKD 2049
Score = 39 (18.8 bits), Expect = 2.2e-22, Sum P(4) = 2.2e-22
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 125 AFDDIPEEGLNSP 137
AF+ + +E LNSP
Sbjct: 1737 AFETVAQEWLNSP 1749
Score = 38 (18.4 bits), Expect = 2.2e-22, Sum P(4) = 2.2e-22
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 279 QVLESALDAQVLRGDNSSLASDIRKEMKA---LNGKL--LKTKDKNTR--REIQK-EL-R 329
+VL+ +LD+QV L S I++ ++ L+ +L L + R RE+Q+ EL
Sbjct: 2032 EVLKFSLDSQVSHRMKKDLPSHIQEMLRRKEILDAQLDELSRQRALCRGGREMQRQELDE 2091
Query: 330 TLSKEERKRQQLA 342
+ ++RQ+LA
Sbjct: 2092 HIVIVSKERQELA 2104
>CGD|CAL0001700 [details] [associations]
symbol:orf19.702 species:5476 "Candida albicans" [GO:0003678
"DNA helicase activity" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006449 "regulation of translational termination"
evidence=IEA] InterPro:IPR003593 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00382 CGD:CAL0001700 GO:GO:0005524 GO:GO:0008270
GO:GO:0005622 GO:GO:0017111 eggNOG:COG1112 EMBL:AACQ01000183
EMBL:AACQ01000182 RefSeq:XP_711775.1 RefSeq:XP_711793.1
ProteinModelPortal:Q59PZ8 GeneID:3646609 GeneID:3646623
KEGG:cal:CaO19.702 KEGG:cal:CaO19.8321 Uniprot:Q59PZ8
Length = 1105
Score = 197 (74.4 bits), Expect = 5.9e-23, Sum P(2) = 5.9e-23
Identities = 110/397 (27%), Positives = 168/397 (42%)
Query: 186 KDIAFKPF----NSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQ--EVKR 239
K I FK F NL+ SQK + L++ ++ +L + EIILQ +
Sbjct: 625 KQIDFKNFLKFQGQNLNESQKKGVQSVLNN-SITVLQGPPGTGKTSTIYEIILQLLDSLN 683
Query: 240 GSKILACAASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLESALDAQVLRGDNSSLAS 299
IL AASNIA+DNI H +L ++ + + R +
Sbjct: 684 TYPILVVAASNIAIDNIAEKLMTK--------HGKDIL-RITAAEKERDYNRSHPLASIC 734
Query: 300 DIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTD-VIKNADVVLTT-- 356
K A+ K + D+ +R + + T + ++ +++ +++ ++ A VVL T
Sbjct: 735 LHHKMYDAMPMKYQQVMDE-MKRGMAPSIGTTAYKKYAQERFFLSNQIVTQAKVVLATPV 793
Query: 357 LTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGS--RCILAGDHLQLPPTVQSVEA 414
+ G + + L+N +VIIDEA Q+ E I L S + +L GD QL S +
Sbjct: 794 VAGGI-KSLNNVR--VVIIDEATQSSEPTTLIPLALPSVEKLVLVGDQKQL-----SCFS 845
Query: 415 EKKGLGRTLFERLADLYGDEVTS-MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS 473
L +LFER+ L G T ML QYRMH I + + Y +K R S
Sbjct: 846 LIPNLSLSLFERVL-LNGTYKTPHMLDTQYRMHPEISEFPRTKFYGGLLKDGIDANARQS 904
Query: 474 S---TEPTLLLIDIAGCDMEE------KKDEEDSTMNEGEAEVAMAHAKRLI-QSGVHAS 523
+ P L D G E+ ++D + N E + LI GV
Sbjct: 905 EGVISSP-LYFWDTKGNAREQSVRNFLREDGGYTYTNRDEIGYIQQVLRTLIITKGVKPE 963
Query: 524 DIGIITPYAAQVVLLKILRSKDDKLK--NMEVST-VD 557
IGIITPY+ Q L+ KDD + N ++ T VD
Sbjct: 964 QIGIITPYSGQRDLISATLVKDDVINPSNEQMKTEVD 1000
Score = 157 (60.3 bits), Expect = 5.9e-23, Sum P(2) = 5.9e-23
Identities = 31/72 (43%), Positives = 50/72 (69%)
Query: 553 VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS- 611
++++D FQGREK+ +I+S VRSN+K +GFL D RR+NVA+TRA+ +V D + + +
Sbjct: 1021 IASIDAFQGREKDYMIMSCVRSNTKGVIGFLRDERRLNVALTRAKYGLIMVGDKKCLQNG 1080
Query: 612 DGFLKRLIEYFE 623
D K ++Y +
Sbjct: 1081 DKLWKEYLQYLD 1092
Score = 42 (19.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 300 DIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQ 340
D + + KA+N KL + + +I K+ T E + + +
Sbjct: 307 DSKPKNKAVNEKLENASNTKPKPKIDKKTPTEKAENKSKSK 347
>TAIR|locus:2166183 [details] [associations]
symbol:AT5G37160 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00521499 RefSeq:NP_198532.1 UniGene:At.55177
ProteinModelPortal:F4K5W6 SMR:F4K5W6 PRIDE:F4K5W6
EnsemblPlants:AT5G37160.1 GeneID:833689 KEGG:ath:AT5G37160
OMA:WAELISE Uniprot:F4K5W6
Length = 871
Score = 301 (111.0 bits), Expect = 7.1e-23, Sum P(2) = 7.1e-23
Identities = 95/286 (33%), Positives = 142/286 (49%)
Query: 347 IKNADVVLTTLTGAVSRKLDNT-SFDLVIIDEAAQALEIACWIALLKGSRC--ILAGDHL 403
++NAD++ T + + S DL+++DE AQ E AL C +L GD
Sbjct: 536 LQNADIIFCTASSVANINPARIGSVDLLVVDETAQLKECESVAALQLPGLCHALLIGDEY 595
Query: 404 QLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK 463
QLP V + E +K GR+LFERL L G +L VQYRMH I + +K+ Y +I
Sbjct: 596 QLPAMVHNEECDKAKFGRSLFERLV-LIGHS-KHLLNVQYRMHPSISRFPNKEFYGGRI- 652
Query: 464 AHPSGVKRTSSTEPTLLLIDIAGC----DMEEKKDE-EDSTMNEGEAEVAM-----AHAK 513
+ V+ S E L ++ G ++ K+E D + EVA+ ++
Sbjct: 653 TDAANVQE-SIYEKRFLQGNMFGTFSFINVGRGKEEFGDGHSPKNMVEVAVISKIISNLF 711
Query: 514 RLIQSGVHASDIGIITPYAAQVVLL------KILRSKDDKLKNMEVSTVDGFQGREKEAI 567
++ +G+I+PY QV + K D+L + V +VDGFQG E + I
Sbjct: 712 KVSSQRKQKMSVGVISPYKGQVRAIQERVGDKYNSLSVDQLFTLNVQSVDGFQGGEVDVI 771
Query: 568 IISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG 613
IIS VR N VGFLS+R+R NVA+TRAR ++ + T++ G
Sbjct: 772 IISTVRCNVNGNVGFLSNRQRANVALTRARHCLWVIGNGTTLALSG 817
Score = 43 (20.2 bits), Expect = 7.1e-23, Sum P(2) = 7.1e-23
Identities = 8/40 (20%), Positives = 25/40 (62%)
Query: 302 RKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQL 341
+K ++++ L T+ K + + EL ++++E+K++++
Sbjct: 399 KKRLESIIDFLENTETKYEQHVNELELERMTEDEKKKEEV 438
Score = 38 (18.4 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 318 KNTRREIQKELRTLSKEERKRQQLAVTDVIK 348
+ TR E+ R+LSK R T VI+
Sbjct: 63 EETRTELFSSFRSLSKSPVSRILSVETKVIE 93
>MGI|MGI:2443480 [details] [associations]
symbol:Setx "senataxin" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR026121 MGI:MGI:2443480 GO:GO:0005524 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0007623 GO:GO:0006302
GO:GO:0004386 eggNOG:COG1112 GO:GO:0006369 KO:K10706 EMBL:AL772379
GeneTree:ENSGT00580000081652 CTD:23064 HOVERGEN:HBG108476
OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15 EMBL:AL845267
EMBL:AK044730 EMBL:AK048354 EMBL:AK077911 EMBL:BC046382
EMBL:BC058109 EMBL:BC079604 EMBL:AK129177 EMBL:BK001523
IPI:IPI00421108 IPI:IPI00626271 RefSeq:NP_932150.2 UniGene:Mm.41867
ProteinModelPortal:A2AKX3 SMR:A2AKX3 DIP:DIP-56995N IntAct:A2AKX3
STRING:A2AKX3 PhosphoSite:A2AKX3 PaxDb:A2AKX3 PRIDE:A2AKX3
Ensembl:ENSMUST00000061578 Ensembl:ENSMUST00000129544 GeneID:269254
KEGG:mmu:269254 UCSC:uc008izm.1 InParanoid:A2AKX3 NextBio:392760
Bgee:A2AKX3 CleanEx:MM_SETX Genevestigator:A2AKX3 Uniprot:A2AKX3
Length = 2646
Score = 319 (117.4 bits), Expect = 7.9e-23, Sum P(4) = 7.9e-23
Identities = 98/333 (29%), Positives = 167/333 (50%)
Query: 321 RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTT---LTGAVSRKLDNTSFDLVIIDE 377
R+E+ +++ + ++ Q + + + T+ L + R F VI+DE
Sbjct: 2099 RQELASKIKEVQGRPQRAQNTIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVDE 2158
Query: 378 AAQALEIACWIALL-KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT 436
A Q+ E+ L+ + ++ IL GD QLPPTV S++A++ G +++ R L + V
Sbjct: 2159 AGQSCEVETLSPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCKLLEENVE 2218
Query: 437 S---------MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK-RTSSTEP--TLLLIDI 484
LT+QYRMH I + S +YN +K + R SS P L+ D+
Sbjct: 2219 QNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLKTNRLTESIRCSSEWPFQPYLVFDV 2278
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHAS--DIGIITPYAAQVVLL-KIL 541
D E++D DS +N E ++ M K + + S +IGIIT Y AQ ++ K L
Sbjct: 2279 G--DGSERRDN-DSYINVQEIKLVMEIIKLIKEKRKDISFRNIGIITHYKAQKTMIQKDL 2335
Query: 542 RSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK-EVGFLSDRRRMNVAVTRARRQC 600
+ DK EV TVD FQGR+K+ II++ VR+++ + +GFL+ +R+NV +TRA+
Sbjct: 2336 EKEFDKKGPAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKYSL 2395
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSE 633
++ T+ + LI+ ++ + S+
Sbjct: 2396 FILGHLRTLMENQHWYELIQDAQKRGAIIKTSD 2428
Score = 48 (22.0 bits), Expect = 7.9e-23, Sum P(4) = 7.9e-23
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 236 EVKRGSKILACAASNIAVDNI 256
++K+ +++L CA SN AVD +
Sbjct: 1973 KIKQ-NRVLVCAPSNAAVDEL 1992
Score = 41 (19.5 bits), Expect = 7.9e-23, Sum P(4) = 7.9e-23
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 279 QVLESALDAQV---LRGDNSSLASDIRKEMKALNGKL--LKTKDKNTR--REIQK-EL-R 329
+VL+ +LD+QV ++ D S ++ + + L+ +L L + R RE+Q+ EL
Sbjct: 2031 EVLKFSLDSQVNHRMKKDLPSHIQEMLRRKEILDAQLDELSRQRALCRGGREMQRQELDE 2090
Query: 330 TLSKEERKRQQLA 342
++ ++RQ+LA
Sbjct: 2091 HIAIVSKERQELA 2103
Score = 40 (19.1 bits), Expect = 3.0e-22, Sum P(3) = 3.0e-22
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 130 PEEGLNSPLRLEKLANEVTYRRMKD 154
PE+ +N+ + L ++V +R KD
Sbjct: 2024 PEKSINTEVLKFSLDSQVNHRMKKD 2048
Score = 38 (18.4 bits), Expect = 7.9e-23, Sum P(4) = 7.9e-23
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 35 SASITSGASRNLDTAQKKGSTILNLKCVDAQTGL 68
SAS T+ S++L++ + S + N K AQ L
Sbjct: 1584 SASRTANLSKSLESTTLQQSALKN-KSSGAQPNL 1616
>TAIR|locus:2200996 [details] [associations]
symbol:SDE3 "SILENCING DEFECTIVE" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0009616
"virus induced gene silencing" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0035194 "posttranscriptional gene
silencing by RNA" evidence=IMP] InterPro:IPR026127 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005737
eggNOG:COG1112 EMBL:AC005106 GO:GO:0003724 GO:GO:0035194
GO:GO:0009616 HOGENOM:HOG000239755 EMBL:AF339908 EMBL:AK117698
IPI:IPI00521883 PIR:C86189 RefSeq:NP_172037.1 UniGene:At.15329
UniGene:At.42398 ProteinModelPortal:Q8GYD9 SMR:Q8GYD9 STRING:Q8GYD9
PaxDb:Q8GYD9 PRIDE:Q8GYD9 EnsemblPlants:AT1G05460.1 GeneID:837047
KEGG:ath:AT1G05460 GeneFarm:2423 TAIR:At1g05460 InParanoid:Q8GYD9
OMA:DEREGNN PhylomeDB:Q8GYD9 ProtClustDB:CLSN2682016
Genevestigator:Q8GYD9 GermOnline:AT1G05460 PANTHER:PTHR10887:SF165
Uniprot:Q8GYD9
Length = 1002
Score = 262 (97.3 bits), Expect = 5.7e-22, Sum P(2) = 5.7e-22
Identities = 83/245 (33%), Positives = 126/245 (51%)
Query: 352 VVLTTLTGAV--SRKLDNTSFDLVIIDEAAQALEIACWIAL----LKGSRCILAGDHLQL 405
VV T ++ ++ + ++ F +++DEA QA E IA+ L + +LAGD QL
Sbjct: 519 VVSTYMSASLLNAEGVNRGHFTHILLDEAGQASEPENMIAVSNLCLTETVVVLAGDPRQL 578
Query: 406 PPTVQSVEAEKKGLGRTLFERL--ADLY--GDE-VTSMLTVQYRMHEHIMNWSSKQLYNS 460
P + S +AE GLG++ ERL D Y GDE + L YR H I++ SK Y+
Sbjct: 579 GPVIYSRDAESLGLGKSYLERLFECDYYCEGDENYVTKLVKNYRCHPEILDLPSKLFYDG 638
Query: 461 KI---KAHPSGVKRTSSTEPT----LLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAK 513
++ K V + + P ++ I GCD E++ S N E + K
Sbjct: 639 ELVASKEDTDSVLASLNFLPNKEFPMVFYGIQGCD--EREGNNPSWFNRIEISKVIETIK 696
Query: 514 RLIQSG-VHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMV 572
RL + V DIG+ITPY QV+ +K + + D + ++V +V+ FQG+EK+ IIIS V
Sbjct: 697 RLTANDCVQEEDIGVITPYRQQVMKIKEVLDRLD-MTEVKVGSVEQFQGQEKQVIIISTV 755
Query: 573 RSNSK 577
RS K
Sbjct: 756 RSTIK 760
Score = 221 (82.9 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 74/221 (33%), Positives = 109/221 (49%)
Query: 410 QSVEAEKKGLGRTLFERLADLY--GDE-VTSMLTVQYRMHEHIMNWSSKQLYNSKI---K 463
+S+ K L R LFE D Y GDE + L YR H I++ SK Y+ ++ K
Sbjct: 588 ESLGLGKSYLER-LFE--CDYYCEGDENYVTKLVKNYRCHPEILDLPSKLFYDGELVASK 644
Query: 464 AHPSGVKRTSSTEPT----LLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG 519
V + + P ++ I GCD E++ S N E + KRL +
Sbjct: 645 EDTDSVLASLNFLPNKEFPMVFYGIQGCD--EREGNNPSWFNRIEISKVIETIKRLTAND 702
Query: 520 -VHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK 578
V DIG+ITPY QV+ +K + + D + ++V +V+ FQG+EK+ IIIS VRS K
Sbjct: 703 CVQEEDIGVITPYRQQVMKIKEVLDRLD-MTEVKVGSVEQFQGQEKQVIIISTVRSTIKH 761
Query: 579 E-------VGFLSDRRRMNVAVTRARRQCCLVCDTETVSSD 612
+GFLS+ RR NVA+TRA ++ + + D
Sbjct: 762 NEFDRAYCLGFLSNPRRFNVAITRAISLLVIIGNPHIICKD 802
Score = 78 (32.5 bits), Expect = 5.7e-22, Sum P(2) = 5.7e-22
Identities = 38/160 (23%), Positives = 68/160 (42%)
Query: 103 DLGSPALGQGVVYRLKDSSITVAF--DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLS 160
D G+ QG V+R++ + + F + S + N + RR+ A + +
Sbjct: 308 DDGTDHAYQGFVHRVEADEVHMKFASEFHQRHTAGSVYNVRFTYNRINTRRLYQA-VDAA 366
Query: 161 KGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNV--FMLH 218
+ + P L P L ++ + K F P + L+ Q +I L K +++H
Sbjct: 367 EMLD--PNF-LFPSLHSGKR---MIKTKPFVPISPALNAEQICSIEMVLGCKGAPPYVIH 420
Query: 219 XXXXXXXXXXVVEIILQ--EVKRGSKILACAASNIAVDNI 256
+VE I+Q +R +++L CA SN A D+I
Sbjct: 421 GPPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSAADHI 460
>RGD|1565575 [details] [associations]
symbol:Setx "senataxin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=IEA;ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=ISO] [GO:0007623 "circadian rhythm"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR026121 RGD:1565575 GO:GO:0006302 PANTHER:PTHR10887:SF15
IPI:IPI00560336 Ensembl:ENSRNOT00000018281 UCSC:RGD:1565575
ArrayExpress:F1M0E2 Uniprot:F1M0E2
Length = 380
Score = 198 (74.8 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 64/194 (32%), Positives = 99/194 (51%)
Query: 370 FDLVIIDEAAQALEIACWIALL-KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
F VI+DEA Q+ E+ L+ + ++ +L GD QLPPTV S++A++ G +++ R
Sbjct: 24 FSCVIVDEAGQSCEVETLSPLIHRCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMARFC 83
Query: 429 DLYGDEVTS---------MLTVQYRMHEHIMNWSSKQLYNSKIKAHP-SGVKRTSSTEP- 477
L + V LT+QYRMH I + S +YN +K + + R SS P
Sbjct: 84 KLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLKTNRLTETIRCSSEWPF 143
Query: 478 -TLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHAS--DIGIITPYAAQ 534
L+ D+ D E++D DS +N E ++ M K + + S +IGIIT Y AQ
Sbjct: 144 QPYLVFDVG--DGSEQRDN-DSYINVQEIKLVMEIIKLIKEKRKDISFRNIGIITHYKAQ 200
Query: 535 VVLL-KILRSKDDK 547
++ K L + DK
Sbjct: 201 KTMIQKDLEKEFDK 214
Score = 125 (49.1 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 26/70 (37%), Positives = 45/70 (64%)
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKK-EVGFLSDRRRMNVAVTRARRQCCLVCDTETVS 610
EV TVD FQGR+K+ II++ VR+++ + +GFL+ +R+NV +TRA+ ++ T+
Sbjct: 274 EVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLM 333
Query: 611 SDGFLKRLIE 620
+ LI+
Sbjct: 334 ENQHWYELIQ 343
Score = 41 (19.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 22/98 (22%), Positives = 38/98 (38%)
Query: 327 ELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF-DLVIIDEAAQALEIA 385
E+ L KE+RK +I + T + + ++ D +++ E+ Q A
Sbjct: 174 EIIKLIKEKRKDISFRNIGIITHYKAQKTMIQKDLEKEFDKKGLLQPIMMGESRQQDSEA 233
Query: 386 CWIALLKGSRCILAGDHLQLPPTVQS-VEAEKKGLGRT 422
K S C+ A D L QS + + + G T
Sbjct: 234 SK-QQQKSSECMHASDELDSSTVTQSGISSLENGATHT 270
>DICTYBASE|DDB_G0274777 [details] [associations]
symbol:DDB_G0274777 "DNA replication helicase"
species:44689 "Dictyostelium discoideum" [GO:0006261 "DNA-dependent
DNA replication" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR014808
dictyBase:DDB_G0274777 Pfam:PF08696 GO:GO:0005634 GO:GO:0006261
EMBL:AAFI02000012 GO:GO:0004003 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 KO:K10742 RefSeq:XP_643888.1
ProteinModelPortal:Q86IV6 EnsemblProtists:DDB0233088 GeneID:8619314
KEGG:ddi:DDB_G0274777 InParanoid:Q86IV6 Uniprot:Q86IV6
Length = 1838
Score = 169 (64.5 bits), Expect = 2.7e-21, Sum P(3) = 2.7e-21
Identities = 33/78 (42%), Positives = 52/78 (66%)
Query: 547 KLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVG-FLSDRRRMNVAVTRARRQCCLVCD 605
K++N+++ T+D FQG++K+ IIIS VRSN KKE+G + D +RMNVA TRA+++ V
Sbjct: 1747 KIENLDILTIDKFQGKDKDCIIISFVRSNEKKEIGELIKDWKRMNVAFTRAKKKLIFVGS 1806
Query: 606 TETVSSDGFLKRLIEYFE 623
++S F E+ +
Sbjct: 1807 KSSLSKFPFFLDFFEFLD 1824
Score = 156 (60.0 bits), Expect = 2.7e-21, Sum P(3) = 2.7e-21
Identities = 40/116 (34%), Positives = 64/116 (55%)
Query: 347 IKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLP 406
++ +V T+ G + L FD IIDEA+ + +LK +L GDH QLP
Sbjct: 1428 LERQQLVATSCLGINHQCLLKMQFDYCIIDEASILSQPISMGPILKCKSFVLVGDHHQLP 1487
Query: 407 PTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKI 462
P V + EA K GL +LF++L+ + V+++ QYRM IM+ S+ +YN+++
Sbjct: 1488 PIVNNKEAGKLGLDISLFKQLSTSHPSSVSNLYH-QYRMCNSIMSLSNHLIYNNRL 1542
Score = 68 (29.0 bits), Expect = 2.7e-21, Sum P(3) = 2.7e-21
Identities = 18/71 (25%), Positives = 37/71 (52%)
Query: 186 KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHXXXXXXXXXXVVEIILQEVKRGSKILA 245
K I F+ L+ Q++AI K LS+K+ ++H V+ +I + G K+L
Sbjct: 1311 KSIDFQNDYPLLNIDQRNAIIKTLSAKDYSLIHGMPGTGKTTLVISLIHILWRLGKKVLI 1370
Query: 246 CAASNIAVDNI 256
+ ++ ++D++
Sbjct: 1371 TSFTHTSLDHL 1381
Score = 55 (24.4 bits), Expect = 5.6e-11, Sum P(3) = 5.6e-11
Identities = 24/109 (22%), Positives = 47/109 (43%)
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEE 491
G++ S L++Q + + N + L + I P + +S+ ++ ++ +
Sbjct: 1545 GNQSISNLSLQTNYYHNNNNTTHIDLLDH-INNWPQIICNPNSS---VIFVNTDQLNNST 1600
Query: 492 KKDEEDSTMNEGEAEVAMAHAKRLIQS-GVHASDIGIITPYAAQVVLLK 539
+ D N+ EA + LI ++ S IGIITP Q+ +K
Sbjct: 1601 ESSNGDLFYNQTEANIVAILTNCLINKLNINQSQIGIITPIRFQLNFIK 1649
>UNIPROTKB|I3LBB7 [details] [associations]
symbol:I3LBB7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] InterPro:IPR026851 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:CU468421
Ensembl:ENSSSCT00000030264 OMA:STCHITH Uniprot:I3LBB7
Length = 249
Score = 172 (65.6 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 39/95 (41%), Positives = 53/95 (55%)
Query: 369 SFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
+FD I+DEA+Q + C L R +L GDH QLPP V + EA G+ +LF+RL
Sbjct: 12 TFDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRLE 71
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK 463
LTVQYRM+ IM+ S+K Y K++
Sbjct: 72 Q--NKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLE 104
Score = 127 (49.8 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 29/81 (35%), Positives = 48/81 (59%)
Query: 495 EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVS 554
E+ N EA++ + +++G + +IGII PY Q+ ++ L S + +EV+
Sbjct: 164 EKGGVSNITEAKLVVYLTSIFVKAGCNPCNIGIIAPYRQQLKVINDLLSHSS-VGMVEVN 222
Query: 555 TVDGFQGREKEAIIISMVRSN 575
TVD +QGR+K I++S VRSN
Sbjct: 223 TVDKYQGRDKSIILVSFVRSN 243
>FB|FBgn0035842 [details] [associations]
symbol:CG7504 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
SMART:SM00240 GO:GO:0005875 EMBL:AE014296 GO:GO:0006200
GO:GO:0016887 Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:COG1112
KO:K10706 GeneTree:ENSGT00580000081652 RefSeq:NP_001137907.1
UniGene:Dm.31993 ProteinModelPortal:B7Z0D7 SMR:B7Z0D7 STRING:B7Z0D7
PaxDb:B7Z0D7 EnsemblMetazoa:FBtr0273367 GeneID:38904
KEGG:dme:Dmel_CG7504 FlyBase:FBgn0035842 OMA:NRSKSCY
OrthoDB:EOG4DV42G GenomeRNAi:38904 NextBio:810939 Bgee:B7Z0D7
Uniprot:B7Z0D7
Length = 1676
Score = 275 (101.9 bits), Expect = 5.7e-20, Sum P(2) = 5.7e-20
Identities = 101/369 (27%), Positives = 173/369 (46%)
Query: 286 DAQVLRGDNSSLASDIR--KEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAV 343
+A++L+ ++ L +I+ KE L L + + +++Q LS +R++ +
Sbjct: 1298 NAEILKKQHNDLKDEIQQLKEKTNLTSTYLLQQLQQKEKKLQLISNQLSPPLTQREEFEI 1357
Query: 344 TDV-IKNADVVLTTLTGAVSRKLDN--TSFDLVIIDEAAQALEIACWIALLKG-SRCILA 399
+ + + A+++ TTL+ V KL N FD+ I+DEA Q E + + G + +L
Sbjct: 1358 SHMCVTRANIICTTLSSCV--KLANYVDFFDICIVDEATQCTEPWTLLPMRFGLTHMVLV 1415
Query: 400 GDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEV----------TSM--LTVQYRMHE 447
GD QLP V S +A GL ++F+R+ ++ T + L+ QYRMH
Sbjct: 1416 GDMQQLPAVVLSKKAIDFGLSNSMFDRIQRSLQTQLDKPGSYHLMHTKLFKLSTQYRMHP 1475
Query: 448 HIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEV 507
I W ++ Y ++ + S P ++ CD +++ S N EA
Sbjct: 1476 EICRWPNQYFYEDQLINAECTARFASPLIPYCVINLKYTCDSNGAQNK--SISNNEEARF 1533
Query: 508 AMAHAKRLIQSGVHASD----IGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGR 562
AK L + H G+I+PY Q L +++ S N+ TVD +QG
Sbjct: 1534 V---AKLLTEMDKHMPSKRFSYGLISPYQNQCYALSQVIPSH----MNITPQTVDSYQGL 1586
Query: 563 EKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT-ETVSSDGFLKRLIEY 621
EK+ IIIS R+ GFL++ +R+NVA+TR RR C ++C E + S + L++
Sbjct: 1587 EKDVIIISNARTRG---CGFLTNYQRLNVALTRPRR-CLVICGNFEDLKSVEMWRNLLDD 1642
Query: 622 FEEHAEYLS 630
+ Y +
Sbjct: 1643 ARKRKVYFN 1651
Score = 51 (23.0 bits), Expect = 5.7e-20, Sum P(2) = 5.7e-20
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 242 KILACAASNIAVDNI 256
KIL CA SN AVD+I
Sbjct: 1229 KILICAHSNTAVDHI 1243
>ZFIN|ZDB-GENE-061013-333 [details] [associations]
symbol:zgc:154086 "zgc:154086" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-061013-333 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR025223 Pfam:PF14444
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 HOGENOM:HOG000015363 EMBL:BC124807
IPI:IPI00611882 RefSeq:NP_001070795.1 UniGene:Dr.40096
ProteinModelPortal:Q08BA5 GeneID:768184 KEGG:dre:768184
NextBio:20918499 Uniprot:Q08BA5
Length = 1106
Score = 184 (69.8 bits), Expect = 2.2e-19, Sum P(4) = 2.2e-19
Identities = 63/214 (29%), Positives = 108/214 (50%)
Query: 435 VTSMLTVQYRMHEHIMNWSSKQLYNSK--IKAHPSGVKRTSSTE--PT----LLLIDIAG 486
VT +L YR HE +++ S+ Y + ++A + V PT L+ + G
Sbjct: 887 VTKLL-YNYRSHEALLDLPSRLFYAGELCVRAQRAAVDSLCHWNKLPTRGFPLIFHGVRG 945
Query: 487 CDMEEKKDEEDSTMNEGEAEVAMAH----AKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+M E + S N EA M + AKRL + A+DIG+I PY QV +++L
Sbjct: 946 SEMREGCNP--SWFNPAEAVQVMMYCCQLAKRLYNP-ISAADIGVIAPYRKQVEKIRVLL 1002
Query: 543 SKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSK---KEV----GFLSDRRRMNVAVTR 595
+ L ++V +V+ FQG+E +I+S VRSN +E+ GFLS+ +R NVA+TR
Sbjct: 1003 QRVG-LGEVKVGSVEEFQGQEFLIMILSTVRSNESLLNEELQCMLGFLSNPKRFNVAITR 1061
Query: 596 ARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYL 629
A+ ++ + + + L++Y ++ ++
Sbjct: 1062 AKALLIVIGNPHVLIKEPCFSALLQYSYDNRAFI 1095
Score = 109 (43.4 bits), Expect = 2.2e-19, Sum P(4) = 2.2e-19
Identities = 48/150 (32%), Positives = 70/150 (46%)
Query: 332 SKEERKRQQLAVTDVIKNAD---VVLTTLTGA---VSRKLDNTSFDLVIIDEAAQALEIA 385
S E RQ + I++A +V++T + A L F V +DEA QA E
Sbjct: 764 SMSEELRQYARAGEDIRHASFHRIVVSTCSSAGMFYQIGLRVGHFTHVFVDEAGQATEPE 823
Query: 386 CWI--ALLK--GSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA--DLY--GDE--- 434
I +LL + +LAGD QL P V+S A GLG +L ERL LY G+
Sbjct: 824 TLIPLSLLSETSGQIVLAGDPKQLGPVVKSRLASVFGLGVSLLERLMGNSLYACGERGFN 883
Query: 435 --VTSMLTVQYRMHEHIMNWSSKQLYNSKI 462
+ + L YR HE +++ S+ Y ++
Sbjct: 884 PLLVTKLLYNYRSHEALLDLPSRLFYAGEL 913
Score = 72 (30.4 bits), Expect = 2.2e-19, Sum P(4) = 2.2e-19
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 193 FNSNLDHSQKDAISKALSSKN---VFMLHXXXXXXXXXXVVEIILQEVKR--GSKILACA 247
FN +L+ +QK A+ + LS ++ ++L ++E ILQ R S++L C
Sbjct: 669 FNPDLNAAQKQAVRRILSGESRPTPYVLFGPPGTGKTITLIEAILQVHHRISCSRVLVCT 728
Query: 248 ASNIAVDNI 256
SN A D I
Sbjct: 729 PSNSAADLI 737
Score = 43 (20.2 bits), Expect = 2.2e-19, Sum P(4) = 2.2e-19
Identities = 20/68 (29%), Positives = 29/68 (42%)
Query: 93 DVVVLKPNKADLGSPALGQ-GVVYRLKDSSITVAFD-DIPEEGLNSPLRLEKLANEVTYR 150
D VVLK K G + V + D +++ + + L PL +E N +T R
Sbjct: 526 DKVVLK--KPCSGGVVIEYIAYVTEISDEDVSLRVNAEFQSSYLGEPLDVEFSFNRLTMR 583
Query: 151 RMKDALIQ 158
R AL Q
Sbjct: 584 RCHCALEQ 591
Score = 41 (19.5 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 394 SRCILAGDHLQLPPTVQSVEAEKKGLGR 421
S C+L GD +L VQ+ +E++ L R
Sbjct: 280 SVCLLMGDCSELLIWVQNCGSERQQLQR 307
>ZFIN|ZDB-GENE-091230-8 [details] [associations]
symbol:mov10a "Moloney leukemia virus 10, homolog, a"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 ZFIN:ZDB-GENE-091230-8
GO:GO:0005524 GO:GO:0017111 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:CU469362
IPI:IPI00481619 RefSeq:XP_002662576.2 UniGene:Dr.155704
Ensembl:ENSDART00000064826 GeneID:566858 KEGG:dre:566858 CTD:566858
NextBio:20888414 Bgee:E7FAV9 Uniprot:E7FAV9
Length = 1001
Score = 174 (66.3 bits), Expect = 2.3e-19, Sum P(3) = 2.3e-19
Identities = 47/122 (38%), Positives = 74/122 (60%)
Query: 523 SDIGIITPYAAQVVLL-KILRSKDD--KLKNMEVSTVDGFQGREKEAIIISMVRS--NSK 577
+DIGII PY QV + K L + + K K+++V +V+ FQG+E++ II+S VRS N
Sbjct: 841 NDIGIIAPYRKQVEKIRKALNTVGELKKWKDIKVGSVEEFQGQERKVIIVSTVRSSVNYV 900
Query: 578 K-----EVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
K +GFLS+ +R NVA+TRA+ +V + +S D ++ I+Y E+ Y +G
Sbjct: 901 KMDQDFNIGFLSNEKRFNVAMTRAKGLLIVVGNPVILSKDPTWQKFIQYCEQEQGY-TGF 959
Query: 633 EY 634
+Y
Sbjct: 960 DY 961
Score = 117 (46.2 bits), Expect = 2.3e-19, Sum P(3) = 2.3e-19
Identities = 46/140 (32%), Positives = 69/140 (49%)
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIAL------LKGSRCILAGDHLQL 405
V L T VS + F + IDEA QA+E C I + LKG + +LAGD QL
Sbjct: 639 VTLVTAGRLVSGGVAMGHFTHIFIDEAGQAVEPECIIGIAGLLDPLKG-QLVLAGDPQQL 697
Query: 406 PPTVQSVEAEKKGLGRTLFERLAD---LYG---DE--------VTSMLTVQYRMHEHIMN 451
P ++S A+ GLG++L ERL LY D+ VT +L YR H I+
Sbjct: 698 GPVLRSPLAQLHGLGQSLLERLMKRNALYQKSQDDNSKYDSRFVTKLLR-NYRSHPAILK 756
Query: 452 WSSKQLYNSKIKAHPSGVKR 471
++ Y ++++ + ++R
Sbjct: 757 IPNELFYENELQVFANQMER 776
Score = 74 (31.1 bits), Expect = 2.3e-19, Sum P(3) = 2.3e-19
Identities = 41/153 (26%), Positives = 73/153 (47%)
Query: 111 QGVVYRLKDSSITVAFD-DIPEEGLNSPLRLEKLANEVTYR-RMKDALIQLSKGVQNGPA 168
+G V+R++ + + F + ++ +N+ ++ + N + R++ ++L+ VQ+ A
Sbjct: 433 EGYVHRVELDKVILGFSRKLLQKFVNN-MKFDVEFNINRFPLRLQHRAVELA--VQH--A 487
Query: 169 AGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHS--QKDAISKALSSKN---VFMLHXXXXX 223
G VLF K T + FN +L+++ QK A+ LS + +++
Sbjct: 488 LG--NVLFPSDKDTGHSELPHLSMFNKDLENNPEQKAAVQHILSGSSRPAPYLIFGPPGT 545
Query: 224 XXXXXVVEIILQ--EVKRGSKILACAASNIAVD 254
VVE I Q + K S ILACA SN A D
Sbjct: 546 GKTVTVVEAIKQVDKSKAQSHILACAPSNSACD 578
>MGI|MGI:2138982 [details] [associations]
symbol:Znfx1 "zinc finger, NFX1-type containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] MGI:MGI:2138982 GO:GO:0046872
EMBL:CH466551 eggNOG:COG1112 GeneTree:ENSGT00700000104467
EMBL:AL591711 CTD:57169 HOVERGEN:HBG052201 OMA:CVRLCSE
EMBL:AK149249 EMBL:AK150223 EMBL:AK157301 EMBL:BC025488
IPI:IPI00660406 RefSeq:NP_001028368.2 UniGene:Mm.297074
ProteinModelPortal:Q8R151 STRING:Q8R151 PhosphoSite:Q8R151
PaxDb:Q8R151 PRIDE:Q8R151 Ensembl:ENSMUST00000048988 GeneID:98999
KEGG:mmu:98999 HOGENOM:HOG000231023 InParanoid:A2A5R3
NextBio:353739 Bgee:Q8R151 CleanEx:MM_ZNFX1 Genevestigator:Q8R151
GermOnline:ENSMUSG00000039501 Uniprot:Q8R151
Length = 1909
Score = 269 (99.8 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 92/321 (28%), Positives = 154/321 (47%)
Query: 313 LKTKDKNTRREI---QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRK--LDN 367
L+ +TRR I +++ RT ++ + + ++K+A+VV T TGA + L
Sbjct: 931 LQMYQADTRRRILSYERQYRTWAERMAELRLQEDLHILKDAEVVGMTTTGAAKYRQILQQ 990
Query: 368 TSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKK-GLGRTLFE 425
+VI++EAA+ LE L K + IL GDH QL P+ + K L +LFE
Sbjct: 991 VEPRIVIVEEAAEVLEAHTIATLSKACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFE 1050
Query: 426 RLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIA 485
RL + V L Q+RM I + +Y ++ HPS +K + L +
Sbjct: 1051 RLVKVNIPFVR--LNYQHRMRPEIARLLTPHIYQD-LENHPSVLKYEQIKGVSSNLFFVE 1107
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL-KILRSK 544
E++ E S N+ EA + + L+ S I I+T Y Q+ L K++ K
Sbjct: 1108 HNFPEQEIQEGKSHQNQHEAHFVVELCQYLLCQEYLPSQITILTTYTGQLFCLRKLMPVK 1167
Query: 545 DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
++V VD +QG E + I++S+VRSN + +VGFL R+ VA++RA++ +
Sbjct: 1168 T--FAGIKVHVVDKYQGEENDIILLSLVRSNQEGKVGFLQIPNRICVALSRAKKGMYCIG 1225
Query: 605 DTETVSSDGFLKRLIEYFEEH 625
+ + ++ R+I E+
Sbjct: 1226 NMQMLAKVPLWSRIIHTLREN 1246
>UNIPROTKB|Q9P2E3 [details] [associations]
symbol:ZNFX1 "NFX1-type zinc finger-containing protein 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] Pathway_Interaction_DB:telomerasepathway
GO:GO:0046872 eggNOG:COG1112 EMBL:AL049766 EMBL:AB037825
EMBL:AK000573 EMBL:AK002139 EMBL:AK022641 EMBL:AK023836
IPI:IPI00165981 IPI:IPI00220462 RefSeq:NP_066363.1
UniGene:Hs.371794 ProteinModelPortal:Q9P2E3 SMR:Q9P2E3
IntAct:Q9P2E3 STRING:Q9P2E3 PhosphoSite:Q9P2E3 DMDM:23821814
PaxDb:Q9P2E3 PeptideAtlas:Q9P2E3 PRIDE:Q9P2E3
Ensembl:ENST00000371752 Ensembl:ENST00000396105 GeneID:57169
KEGG:hsa:57169 UCSC:uc002xui.3 CTD:57169 GeneCards:GC20M047854
HGNC:HGNC:29271 HPA:HPA046629 neXtProt:NX_Q9P2E3
PharmGKB:PA143485687 HOVERGEN:HBG052201 InParanoid:Q9P2E3
OMA:CVRLCSE PhylomeDB:Q9P2E3 ChiTaRS:ZNFX1 GenomeRNAi:57169
NextBio:63185 ArrayExpress:Q9P2E3 Bgee:Q9P2E3 CleanEx:HS_ZNFX1
Genevestigator:Q9P2E3 GermOnline:ENSG00000124201 Uniprot:Q9P2E3
Length = 1918
Score = 265 (98.3 bits), Expect = 7.2e-19, P = 7.2e-19
Identities = 91/321 (28%), Positives = 153/321 (47%)
Query: 313 LKTKDKNTRREI---QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRK--LDN 367
L+ +TRR+I +++ RT ++ + + ++K+A VV T TGA + L
Sbjct: 938 LQLYQADTRRKILSYERQYRTSAERMAELRLQEDLHILKDAQVVGMTTTGAAKYRQILQK 997
Query: 368 TSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKK-GLGRTLFE 425
+VI++EAA+ LE L K + IL GDH QL P+ + K L +LFE
Sbjct: 998 VEPRIVIVEEAAEVLEAHTIATLSKACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFE 1057
Query: 426 RLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIA 485
RL + V L Q+RM I + +Y ++ HPS +K + L +
Sbjct: 1058 RLVKVNIPFVR--LNYQHRMCPEIARLLTPHIYQD-LENHPSVLKYEKIKGVSSNLFFVE 1114
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL-KILRSK 544
E++ E S N+ EA + K + S I I+T Y Q+ L K++ +K
Sbjct: 1115 HNFPEQEIQEGKSHQNQHEAHFVVELCKYFLCQEYLPSQITILTTYTGQLFCLRKLMPAK 1174
Query: 545 DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
+ V VD +QG E + I++S+VRSN + +VGFL R+ VA++RA++ +
Sbjct: 1175 T--FAGVRVHVVDKYQGEENDIILLSLVRSNQEGKVGFLQISNRICVALSRAKKGMYCIG 1232
Query: 605 DTETVSSDGFLKRLIEYFEEH 625
+ + ++ ++I E+
Sbjct: 1233 NMQMLAKVPLWSKIIHTLREN 1253
>ZFIN|ZDB-GENE-070912-617 [details] [associations]
symbol:si:dkey-97a13.6 "si:dkey-97a13.6"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 ZFIN:ZDB-GENE-070912-617
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391 EMBL:BX663525
IPI:IPI00499390 RefSeq:XP_699251.2 UniGene:Dr.89869
Ensembl:ENSDART00000017829 GeneID:570654 KEGG:dre:570654
NextBio:20890238 Uniprot:E7F3B1
Length = 2781
Score = 266 (98.7 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 86/251 (34%), Positives = 126/251 (50%)
Query: 347 IKNADVVLTTLTGAVSRKLDNT-SFDLVIIDEAAQALEIACWIALL--KGSRCILAGDHL 403
++ D++L T T A S L T S ++IDE A A E + L+ K + +L GDH
Sbjct: 2466 LERHDIILCTCTAAASPNLKKTLSARQILIDECAMATEPQTLVPLVSFKPEKVVLLGDHK 2525
Query: 404 QLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK 463
QL P V++ + G+ R+LFER Y D ML QYRMHE I + S+ YN +K
Sbjct: 2526 QLRPIVKNNHVRRLGMTRSLFER----YMDRAI-MLDTQYRMHEEICKFPSEAYYNDMLK 2580
Query: 464 AHPSGVKRTS----STE-----PTLLLIDIAGCDM----EEKKDEEDSTMNEGEAEVAMA 510
+RTS TE +L DI G ++ + E+S N E + A+
Sbjct: 2581 TVVR--ERTSVLNAETEGRRQSKRILFGDIRGEEIGLVVSTARGNENSKANFDEVKKAVE 2638
Query: 511 HAKRLIQSG-VHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIII 569
+L+ G V DI I++PY AQV ++ R D +LK V+T+ QG E + +I+
Sbjct: 2639 ICIQLVTVGRVRPEDIAILSPYNAQVAQIRE-RLSDFELKGFTVTTITKSQGSEWQYVIL 2697
Query: 570 SMVRSNSKKEV 580
S+VRS E+
Sbjct: 2698 SIVRSCPSDEI 2708
Score = 152 (58.6 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 44/154 (28%), Positives = 80/154 (51%)
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG-VHASDIGIITPYAAQVVLLKILRSK 544
G + + E+S N E + A+ +L+ G V DI I++PY AQV ++ R
Sbjct: 2614 GLVVSTARGNENSKANFDEVKKAVEICIQLVTVGRVRPEDIAILSPYNAQVAQIRE-RLS 2672
Query: 545 DDKLKNMEVSTVDGFQGREKEAIIISMVRS---------NSK----KEVGFLSDRRRMNV 591
D +LK V+T+ QG E + +I+S+VRS S+ K +GF+ D ++NV
Sbjct: 2673 DFELKGFTVTTITKSQGSEWQYVILSIVRSCPSDEIEPMPSREWLSKHIGFVGDENQINV 2732
Query: 592 AVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEH 625
+TRA+ C++ + ++ ++L++++ H
Sbjct: 2733 GITRAQVGLCILGNQAVLNCSPAWQKLLKHYSGH 2766
Score = 145 (56.1 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 77/287 (26%), Positives = 125/287 (43%)
Query: 364 KLDNTSFDLVIIDEAAQALEIACWIAL-L--KGSRCILAGDHLQLPPTVQSVEAEKKGLG 420
KL F ++IDEA+Q LE +AL L K +R +LAGDH+Q+ P + SV +K+
Sbjct: 675 KLPKGFFTHILIDEASQMLEGEALMALGLADKHTRVVLAGDHMQMAPKLFSVTDDKRS-E 733
Query: 421 RTLFERLADLYGDEVTSM-------LTVQYRMHEHIMNWSSKQLYNSK-IKAHPSGVKRT 472
TL RL Y D+ ++ YR I+++ S Y S IKA V
Sbjct: 734 HTLLNRLFHYYQDQSINIAKKSRIIFNENYRSTTEIVDFVSTYFYVSDGIKAR-GDVHPH 792
Query: 473 SSTEPTLLLIDIAG-CDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG-VHASD-----I 525
+P L+ + G C + S +N E + + L+ + D I
Sbjct: 793 PRLKP-LIFHHVRGECHLSSTITST-SWLNYAEVNSVVNMVQVLLTDWPMEWGDKDPKQI 850
Query: 526 GIITPYAAQVVLLKI-LRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK-EVG-- 581
+++ QV ++I LR K + V + QG++ III+ V + K ++
Sbjct: 851 CVLSE-GQQVAAIRIHLRRKG--FYGVSVQNLANIQGKQFRVIIITTVHTRDKLLQLDSS 907
Query: 582 ---FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEH 625
F D R +N A+TRA+ ++ D + G ++ + EH
Sbjct: 908 CPEFFDDIRALNTALTRAQSLVVVIGDAGALCCFGKCSKVWRAYIEH 954
Score = 51 (23.0 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 16/84 (19%), Positives = 36/84 (42%)
Query: 138 LRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFG---EQKPTVLKKDIAFKPFN 194
L + K ++TY +D + Q ++ + V + Q+ T LK+D ++ N
Sbjct: 1368 LSMVKSKRQLTYNEAEDIICQCDGELRFDTLEDCVRVAYHFARSQRKTRLKEDWSYAQLN 1427
Query: 195 SNLDHSQKDAISKALSSKNVFMLH 218
+ +++A + + N+ H
Sbjct: 1428 KHQKPGEREA-HRMIEELNIMFNH 1450
Score = 45 (20.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 19/76 (25%), Positives = 35/76 (46%)
Query: 15 LQEFVSVM--APLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
++E+ ++ A L +LE+ I + T+ AS NL +++ +C A
Sbjct: 2451 IEEYKKLLNDARLHELERHDIILCTCTAAASPNLKKTLSARQILID-ECAMATEPQTLVP 2509
Query: 73 LLEFQSTKGDVLPAHK 88
L+ F+ K +L HK
Sbjct: 2510 LVSFKPEKVVLLGDHK 2525
Score = 42 (19.8 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 9 KQSAVSLQEFVSVMAPLIDLEKEA 32
K S +++E+V + PL ++E A
Sbjct: 2089 KGSYSNVEEYVQIWRPLCEMESAA 2112
>RGD|1304735 [details] [associations]
symbol:Mov10l1 "Mov10l1, Moloney leukemia virus 10-like 1,
homolog (mouse)" species:10116 "Rattus norvegicus" [GO:0007281
"germ cell development" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0007517 "muscle organ development" evidence=ISO]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0045786
"negative regulation of cell cycle" evidence=ISO] RGD:1304735
GeneTree:ENSGT00550000074391 InterPro:IPR026125
PANTHER:PTHR10887:SF6 IPI:IPI00560261 Ensembl:ENSRNOT00000050620
ArrayExpress:F1M357 Uniprot:F1M357
Length = 550
Score = 190 (71.9 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 65/215 (30%), Positives = 103/215 (47%)
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK--AHPSGVKRTSSTE--PT----LLLI 482
Y + + L YR H ++ S+ Y+ +++ A P V E P L+
Sbjct: 325 YNPLLVTKLVKNYRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEKLPRKGFPLIFH 384
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHA---KRLIQSGVHASDIGIITPYAAQVVLLK 539
+ G E ++ S + EA M + R + S V + DIG+ITPY QV +K
Sbjct: 385 GVRG--NEAREGRSPSWFSPAEAVQVMRYCCLLARNVSSQVSSKDIGVITPYRKQVEKIK 442
Query: 540 ILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK-E-----VGFLSDRRRMNVAV 593
IL D L +++V +V+ FQG+E I+IS VRSN + E +GFLS+ +R NVA+
Sbjct: 443 ILLRNVD-LTDIKVGSVEEFQGQEYLVIVISTVRSNEDRFEDDRYFLGFLSNSKRFNVAI 501
Query: 594 TRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEY 628
TR + ++ + + D L+EY + Y
Sbjct: 502 TRPKALLIVLGNPHVLVRDPCFGALLEYSVTNGVY 536
Score = 90 (36.7 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 370 FDLVIIDEAAQALEIACWIAL-----LKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLF 424
F V +DEA QA E C I L + G + +LAGD +QL P ++S A GL ++
Sbjct: 245 FTHVFVDEAGQASEPECLIPLGLISDING-QIVLAGDPMQLGPVIKSRLAMAYGLNVSML 303
Query: 425 ERL 427
ERL
Sbjct: 304 ERL 306
Score = 62 (26.9 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 193 FNSNLDHSQKDAISKALSSKN---VFMLHXXXXXXXXXXVVEIILQE--VKRGSKILACA 247
FN L+ +QK A+ + LS ++L ++E +LQ S+IL CA
Sbjct: 106 FNPVLNENQKLAVRRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHYALPDSRILVCA 165
Query: 248 ASNIAVD 254
SN A D
Sbjct: 166 PSNSAAD 172
Score = 58 (25.5 bits), Expect = 6.8e-18, Sum P(3) = 6.8e-18
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 288 QVLRGDNSSLASDIRKEMKAL--NGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTD 345
+V R D S+ + R + +++ N K +K + KNT +E + L T + E+ D
Sbjct: 36 KVTRNDGQSITNITRNDGQSITKNKKTVKDQTKNTTKE--RHLSTTDQPEKTASTAETMD 93
Query: 346 VIK 348
I+
Sbjct: 94 EIQ 96
>UNIPROTKB|G3X7G5 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:DAAA02015125 EMBL:DAAA02015122
EMBL:DAAA02015123 EMBL:DAAA02015124 Ensembl:ENSBTAT00000027109
Uniprot:G3X7G5
Length = 1214
Score = 198 (74.8 bits), Expect = 2.7e-18, Sum P(3) = 2.7e-18
Identities = 66/208 (31%), Positives = 102/208 (49%)
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK--AHPSGVKRTSSTE--PT----LLLI 482
Y + + L YR H ++ S+ Y+ +++ A P+ V E P L+
Sbjct: 963 YNPLLVTKLVKNYRSHSALLALPSRLFYHRELEVCADPTVVASLLGWEKLPRKGFPLIFH 1022
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHA---KRLIQSGVHASDIGIITPYAAQVVLLK 539
+ G E ++ S N EA M + R + S V A DIG+ITPY QV +K
Sbjct: 1023 GVRG--NEAREGRSPSWFNPAEAVQVMRYCCMLARSVSSQVSARDIGVITPYRKQVEKIK 1080
Query: 540 ILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK-E-----VGFLSDRRRMNVAV 593
IL D L +++V +V+ FQG+E +IIS VRSN + E +GFLS+ +R NVA+
Sbjct: 1081 ILLRNVD-LMDIKVGSVEEFQGQEYLVVIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAI 1139
Query: 594 TRARRQCCLVCDTETVSSDGFLKRLIEY 621
TR + ++ + + D L+EY
Sbjct: 1140 TRPKALLIVLGNPHVLVRDPCFGALLEY 1167
Score = 89 (36.4 bits), Expect = 2.7e-18, Sum P(3) = 2.7e-18
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 370 FDLVIIDEAAQALEIACWIAL-----LKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLF 424
F V +DEA QA E C I L + G + +LAGD +QL P ++S A GL ++
Sbjct: 883 FTHVFVDEAGQASEPECLIPLGLVSDVSG-QIVLAGDPMQLGPVIKSRLAMAYGLNVSML 941
Query: 425 ERL 427
ERL
Sbjct: 942 ERL 944
Score = 69 (29.3 bits), Expect = 2.7e-18, Sum P(3) = 2.7e-18
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 191 KPFNSNLDHSQKDAISKALSS--KNV-FMLHXXXXXXXXXXVVEIILQ--EVKRGSKILA 245
K FN L+ +QK A+ + LS + + ++L ++E ILQ S+IL
Sbjct: 742 KFFNPMLNENQKLAVRRILSGDCRPIPYVLFGPPGTGKTVTIIEAILQVFHALPDSRILV 801
Query: 246 CAASNIAVD 254
CA SN A D
Sbjct: 802 CAPSNSAAD 810
>UNIPROTKB|F1RMM8 [details] [associations]
symbol:LOC100519780 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
OMA:FRAAHIM PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:FP102633 Ensembl:ENSSSCT00000003670 Uniprot:F1RMM8
Length = 2879
Score = 266 (98.7 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 98/371 (26%), Positives = 175/371 (47%)
Query: 279 QVLESALDAQVLRGDNSSLASDIRK-EMKALNGKLLKTKDKNTRREIQKELRTLSKEERK 337
Q L S +R ++ A+DIR + + NG+ D R++ +E R + +R
Sbjct: 2508 QTLRSITLHHRIRQASNPYAADIRAFDARLQNGETFSQDDLRWYRKVLQEARKF-EVDRH 2566
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGS--- 394
R V+L T + A S L + + +++DEA A E I L+ S
Sbjct: 2567 R-------------VLLCTCSCAASASLRDVNIRQILVDEAGLASEPETLIPLVSFSQVE 2613
Query: 395 RCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSS 454
+ +L GDH QL P V+S + + GL R+L +R Y + SML +QY +HE I + S
Sbjct: 2614 KVVLLGDHKQLRPVVKSEQLQNLGLDRSLLQR----YRRDA-SMLDLQYCVHESICAFPS 2668
Query: 455 KQLYNSKIKAH-----PSGVKRTSSTEPTLLLIDIAGCD----MEEKKDEEDSTMNEGEA 505
+ Y K+K P + +++ D+ + + ++ E+S +N+ +A
Sbjct: 2669 MEFYKKKLKTWQGLRLPPSILGYGKENCSVIFGDVQSPEESLVVSTEEGRENSKVNKEQA 2728
Query: 506 EVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKE 565
+ + AK+L+ V D+ I+TPY AQV+ + R ++ ++ + V ++ QGR+
Sbjct: 2729 ALVVCLAKQLVSGRVDPKDMAILTPYHAQVLEIS-KRLEEARVAGVTVCSITKSQGRQWR 2787
Query: 566 AIIISMVRSNSK-------------KEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSD 612
+++S VR+ + K +GFL D ++NVA+TRA+ +V D +
Sbjct: 2788 YVLVSTVRTCQESDLDLRPTKSWLQKSLGFLVDPNQVNVALTRAQEGLWVVGDRLLLRCC 2847
Query: 613 GFLKRLIEYFE 623
R +++ E
Sbjct: 2848 PLWSRFLDFCE 2858
Score = 149 (57.5 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 77/297 (25%), Positives = 128/297 (43%)
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIAL--LK----GSRCILAGDHLQL 405
VV+ + T A ++ F + IDEAAQ LE W AL L+ G+R +LAGDH+++
Sbjct: 887 VVVASATQARGLRVPAGFFSHIFIDEAAQMLE---WEALTPLRYATPGTRVVLAGDHMRV 943
Query: 406 PPTVQSVEAEKKGLGRTLFERLADLYGDEVTSM-------LTVQYRMHEHIMNWSSKQL- 457
P + S A + G TL RL + ++ ++ L YR E I+ + S+
Sbjct: 944 APRLFSAAAGRIA-GPTLLHRLLQHFREQAPAVAQRSCVILCKNYRSTEAIVRFVSRHFS 1002
Query: 458 YNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQ 517
S + H SG LL AG + E+ S +N E + + +
Sbjct: 1003 MASGSRPHASGKIPPHPHRYPLLFCHAAG--VPEQDVSMTSWLNAAEVVQVVEKVQEVYN 1060
Query: 518 SGVHA------SDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISM 571
+ H DI +++ A L + LR +D L + V + + GR +++S
Sbjct: 1061 TWPHCWGLREQKDICVVSCGAQVSALRQELRKRD--LGQVSVCSFEILPGRAFRVVVLST 1118
Query: 572 VRSN----SKKEVG--FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
V ++ S++ F +D ++ +T A+ Q V D + S G RL + F
Sbjct: 1119 VHNHRSLLSQRAPAPEFFTDACVLHTVMTHAQSQVVAVGDAVALCSFGTCSRLWKGF 1175
Score = 40 (19.1 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 230 VEIILQEVKRGSKILACAASNIAVDNIXXXXXXXXXXXXXXGHPARLLPQVLE 282
+E+I Q G+K+L C +N D+ GHP + +V++
Sbjct: 803 LEVIRQP---GTKVLICTHTNSTADSYIAEYFHPYTSR---GHPEAIPLRVMD 849
>UNIPROTKB|I6L9H4 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
UniGene:Hs.370140 UniGene:Hs.569824 HGNC:HGNC:16878 ChiTaRS:HELZ
EMBL:BC094881 ProteinModelPortal:I6L9H4 Ensembl:ENST00000579953
Uniprot:I6L9H4
Length = 1163
Score = 233 (87.1 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 76/242 (31%), Positives = 121/242 (50%)
Query: 345 DVIKNADVVLTTLTGAVSRKLDNTS--FDLVIIDEAAQALEIACWIALL---KGSRCILA 399
D++K+ VV+T T +LD F +++DEAAQA+E + L + +R +LA
Sbjct: 762 DILKHRVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLA 821
Query: 400 GDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS--MLTVQYRMHEHIMNWSSKQL 457
GDH+QL P V S A ++ L +L +RL + Y E +L YR HE I+N++S+
Sbjct: 822 GDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELF 881
Query: 458 YNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDE---EDSTMNEGEAEVAMAHAKR 514
Y K+ A SG + L G D++EK ++ + E V K
Sbjct: 882 YEGKLMA--SGKQPAHKDFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKW 939
Query: 515 LIQSG-VHASDIGIITPYAAQVVLLKI-LRSKDDKLKNMEVSTVDGFQGREKEAIIISMV 572
+ G + IG++TPYA QV ++ LR K +L ++ V V QG++ + +S V
Sbjct: 940 PVAWGKLDDGSIGVVTPYADQVFRIRAELRKK--RLSDVNVERVLNVQGKQFRVLFLSTV 997
Query: 573 RS 574
R+
Sbjct: 998 RT 999
Score = 64 (27.6 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 574 SNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
S + GFLS+ + +N A+TRA+ +V D + S G ++ E F
Sbjct: 1020 STEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERF 1068
Score = 45 (20.9 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 230 VEIILQEVKRGSKILACAASNIAVD 254
V+ ILQ+ + S+IL C SN A D
Sbjct: 682 VKHILQQ-QETSRILICTHSNSAAD 705
>MGI|MGI:1891384 [details] [associations]
symbol:Mov10l1 "Moloney leukemia virus 10-like 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0045786 "negative regulation
of cell cycle" evidence=IDA] MGI:MGI:1891384 GO:GO:0005524
GO:GO:0005737 GO:GO:0008283 GO:GO:0007283 GO:GO:0007517
GO:GO:0004386 eggNOG:COG1112 GO:GO:0045786 CTD:54456
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AF285587 EMBL:AF340211 EMBL:AY303754
EMBL:AK084786 IPI:IPI00118099 IPI:IPI00227971 IPI:IPI00453884
RefSeq:NP_112550.2 UniGene:Mm.358791 ProteinModelPortal:Q99MV5
SMR:Q99MV5 STRING:Q99MV5 PhosphoSite:Q99MV5 PaxDb:Q99MV5
PRIDE:Q99MV5 DNASU:83456 GeneID:83456 KEGG:mmu:83456
HOGENOM:HOG000015363 InParanoid:Q99MV5 NextBio:350584
CleanEx:MM_MOV10L1 Genevestigator:Q99MV5
GermOnline:ENSMUSG00000015365 Uniprot:Q99MV5
Length = 1187
Score = 193 (73.0 bits), Expect = 3.6e-17, Sum P(3) = 3.6e-17
Identities = 65/215 (30%), Positives = 103/215 (47%)
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK--AHPSGVKRTSSTE--PT----LLLI 482
Y + + L YR H ++ S+ Y+ +++ A P V E P L+
Sbjct: 962 YNPLLVTKLVKNYRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEKLPRKGFPLIFH 1021
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHA---KRLIQSGVHASDIGIITPYAAQVVLLK 539
+ G E ++ S + EA M + R + S V + DIG+ITPY QV +K
Sbjct: 1022 GVRG--NEAREGRSPSWFSPAEAVQVMRYCCLLARSVSSQVSSKDIGVITPYRKQVEKIK 1079
Query: 540 ILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK-E-----VGFLSDRRRMNVAV 593
IL D L +++V +V+ FQG+E I+IS VRSN + E +GFLS+ +R NVA+
Sbjct: 1080 ILLRNVD-LTDIKVGSVEEFQGQEYLVIVISTVRSNEDRFEDDRYFLGFLSNSKRFNVAI 1138
Query: 594 TRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEY 628
TR + ++ + + D L+EY + Y
Sbjct: 1139 TRPKALLIILGNPHVLVRDPCFGALLEYSVSNGVY 1173
Score = 90 (36.7 bits), Expect = 3.6e-17, Sum P(3) = 3.6e-17
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 370 FDLVIIDEAAQALEIACWIAL-----LKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLF 424
F V +DEA QA E C I L + G + +LAGD +QL P ++S A GL ++
Sbjct: 882 FTHVFVDEAGQASEPECLIPLGLISDING-QIVLAGDPMQLGPVIKSRLAMAYGLNVSML 940
Query: 425 ERL 427
ERL
Sbjct: 941 ERL 943
Score = 62 (26.9 bits), Expect = 3.6e-17, Sum P(3) = 3.6e-17
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 193 FNSNLDHSQKDAISKALSSKN---VFMLHXXXXXXXXXXVVEIILQE--VKRGSKILACA 247
FN L+ +QK A+ + LS ++L ++E +LQ S+IL CA
Sbjct: 743 FNPVLNENQKLAVRRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHYALPDSRILVCA 802
Query: 248 ASNIAVD 254
SN A D
Sbjct: 803 PSNSAAD 809
Score = 41 (19.5 bits), Expect = 5.0e-15, Sum P(3) = 5.0e-15
Identities = 14/63 (22%), Positives = 30/63 (47%)
Query: 288 QVLRGDNSSLASDIRKEMKAL--NGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTD 345
+V R ++ S+ + R + + + N K +K + K+T E + + T + E+ D
Sbjct: 673 KVTRNNSQSITNITRNDGQPITKNKKTVKDQTKHTTEE--RHVGTTDQPEKASSTAETMD 730
Query: 346 VIK 348
I+
Sbjct: 731 EIQ 733
>ZFIN|ZDB-GENE-030131-9089 [details] [associations]
symbol:mov10b.1 "Moloney leukemia virus 10,
homolog, b.1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR003593
SMART:SM00382 ZFIN:ZDB-GENE-030131-9089 GO:GO:0005524 GO:GO:0003723
GO:GO:0004386 GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:BX323059 EMBL:BC171375
IPI:IPI00801311 RefSeq:NP_001037807.2 UniGene:Dr.74181
ProteinModelPortal:Q1LXK4 STRING:Q1LXK4 Ensembl:ENSDART00000086946
GeneID:556024 KEGG:dre:556024 CTD:556024 HOGENOM:HOG000239755
InParanoid:Q1LXK4 OMA:NLVGECY OrthoDB:EOG4SXNC4 NextBio:20881283
Bgee:Q1LXK4 Uniprot:Q1LXK4
Length = 1013
Score = 150 (57.9 bits), Expect = 6.0e-17, Sum P(3) = 6.0e-17
Identities = 45/136 (33%), Positives = 72/136 (52%)
Query: 506 EVAMAHAKRLIQSGVHASDIGIITPYAAQVV----LLKILRS-KD-DKLKNMEVSTVDGF 559
++ + AK+ I + DIGII PY QV +KI R K ++ ++V +V+ F
Sbjct: 831 KLLLTQAKKGIAK-ISPKDIGIIAPYRKQVEKIRQAIKIHRELKSLSGIEELKVGSVEEF 889
Query: 560 QGREKEAIIISMVRSNS-------KKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSD 612
QG+E++ II+S VRS+ K +GFL + +R NVAVTRA+ +V + + +D
Sbjct: 890 QGQERKVIIVSTVRSSKEHIILDDKFNIGFLKNEKRFNVAVTRAKALLIMVGNPIILRTD 949
Query: 613 GFLKRLIEYFEEHAEY 628
R + Y + Y
Sbjct: 950 EIWGRFMNYCIQERGY 965
Score = 122 (48.0 bits), Expect = 6.0e-17, Sum P(3) = 6.0e-17
Identities = 64/220 (29%), Positives = 97/220 (44%)
Query: 322 REIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA---VSRKLDNTSFDLVIIDEA 378
+EI K L S E + + + +V+ TL A VS F + +DEA
Sbjct: 615 KEIPKVLENNSNVEGENIIFPCKEDLMPYKIVVCTLVTAGRLVSGGFPVGHFSHIFVDEA 674
Query: 379 AQALE--IACWIA-LLKGS--RCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA---DL 430
A+E I +A LL + +LAGD QL P ++S A K GLG +L ERL +L
Sbjct: 675 GHAVEPEIVISVAGLLNAETGQLVLAGDPKQLGPILRSPFAIKYGLGLSLLERLMTQNEL 734
Query: 431 Y--GDE------VTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK-RTSSTEPTL-- 479
Y GD VT +L YR H I+ ++ Y++++KA + R T L
Sbjct: 735 YQKGDTGFDNRYVTKLLQ-NYRSHPSILKVPNELFYDNELKACADEISSRQYCTWEHLPK 793
Query: 480 --LLIDIAGC-DMEEKKDEEDSTMNEGEAEVAMAHAKRLI 516
+ G +E++ S N E + M + K+L+
Sbjct: 794 RGFPVIFHGVVGKDERESTSPSFFNTSEIDKIMDYLKKLL 833
Score = 71 (30.1 bits), Expect = 6.0e-17, Sum P(3) = 6.0e-17
Identities = 42/176 (23%), Positives = 74/176 (42%)
Query: 90 GTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDD-IPEEGL-NSPLRLEKLANEV 147
G H +++ K + + +G V+R++ + + F + E + N +E N +
Sbjct: 421 GDH-LLLTKSEELQNSNVTKYKGYVHRVELDQVKLGFSKRLLERFIDNMKFSVEFTINRL 479
Query: 148 TYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHS--QKDAI 205
R A+ + VQ+ L PV P A + F+ L+ + QK A+
Sbjct: 480 PLRLQHRAVHMV---VQHHLKDVLFPVASRRLNPV---SPSALRLFDQKLEKNPEQKTAV 533
Query: 206 SKALS--SKNV-FMLHXXXXXXXXXXVVEIILQEVKR--GSKILACAASNIAVDNI 256
++ SK +++ +VE I Q K G++ILACA SN A D +
Sbjct: 534 CNIVAGTSKPAPYLVFGPPGTGKTVTIVEAIKQVEKNTGGARILACAPSNSAADQL 589
>RGD|1307049 [details] [associations]
symbol:Helz "helicase with zinc finger" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 RGD:1307049
GO:GO:0008270 GO:GO:0003676 CTD:9931 OrthoDB:EOG4NP72K OMA:YRVALLY
GeneTree:ENSGT00550000074391 IPI:IPI00364329 RefSeq:NP_001099318.2
ProteinModelPortal:D4ADZ6 Ensembl:ENSRNOT00000030300 GeneID:287773
KEGG:rno:287773 Uniprot:D4ADZ6
Length = 1964
Score = 237 (88.5 bits), Expect = 6.8e-17, Sum P(3) = 6.8e-17
Identities = 77/242 (31%), Positives = 121/242 (50%)
Query: 345 DVIKNADVVLTTLTGAVSRKLDNTS--FDLVIIDEAAQALEIACWIALL---KGSRCILA 399
D++K+ VV+T T +LD F +++DEAAQA+E + L K +R +LA
Sbjct: 762 DILKHRVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLA 821
Query: 400 GDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS--MLTVQYRMHEHIMNWSSKQL 457
GDH+QL P V S A ++ L +L +RL + Y E +L YR HE I+N++S+
Sbjct: 822 GDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELF 881
Query: 458 YNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDE---EDSTMNEGEAEVAMAHAKR 514
Y K+ A SG + L G D++EK ++ + E V K
Sbjct: 882 YEGKLMA--SGKQPAHKDFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKW 939
Query: 515 LIQSG-VHASDIGIITPYAAQVVLLKI-LRSKDDKLKNMEVSTVDGFQGREKEAIIISMV 572
+ G + IG++TPYA QV ++ LR K +L ++ V V QG++ + +S V
Sbjct: 940 PVAWGKLDDGSIGVVTPYADQVFRIRAELRKK--RLSDVNVERVLNVQGKQFRVLFLSTV 997
Query: 573 RS 574
R+
Sbjct: 998 RT 999
Score = 65 (27.9 bits), Expect = 6.8e-17, Sum P(3) = 6.8e-17
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 574 SNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
S + GFLS+ + +N A+TRA+ +V D + S G ++ E F
Sbjct: 1020 STEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPVALCSIGRCRKFWERF 1068
Score = 45 (20.9 bits), Expect = 6.8e-17, Sum P(3) = 6.8e-17
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 230 VEIILQEVKRGSKILACAASNIAVD 254
V+ ILQ+ + S+IL C SN A D
Sbjct: 682 VKHILQQ-QETSRILICTHSNSAAD 705
>POMBASE|SPCC1739.03 [details] [associations]
symbol:hrr1 "Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1" species:4896 "Schizosaccharomyces
pombe" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0031048
"chromatin silencing by small RNA" evidence=IMP] [GO:0031379
"RNA-directed RNA polymerase complex" evidence=IDA] [GO:0031380
"nuclear RNA-directed RNA polymerase complex" evidence=IDA]
PomBase:SPCC1739.03 GO:GO:0005829 GO:GO:0005524 GO:GO:0007059
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0006338
GO:GO:0007049 GO:GO:0030702 GO:GO:0004386 GO:GO:0031048
eggNOG:COG1112 GO:GO:0016585 GO:GO:0031380 PIR:T41111
RefSeq:NP_588411.2 DIP:DIP-29303N STRING:O74465
EnsemblFungi:SPCC1739.03.1 GeneID:2539248 OrthoDB:EOG4DRDMD
NextBio:20800418 Uniprot:O74465
Length = 999
Score = 252 (93.8 bits), Expect = 8.4e-17, Sum P(2) = 8.4e-17
Identities = 87/290 (30%), Positives = 146/290 (50%)
Query: 322 REIQKELRTLSKEERKR---QQLAVTDVIKNADVVLTTLTGAVSRK--LDNTSFDLVIID 376
+E+ + R K +R+R +++ A+V+ T TG + L+ + + I+
Sbjct: 652 KELNRLYRFYLKVDRERIGFSNKRAAILLRGANVIGMTTTGLNKYRDILERINPKICFIE 711
Query: 377 EAAQALEIACWIALLKG-SRCILAGDHLQLPP--TVQSVEAEKKGLGRTLFERLADLYGD 433
EAA LE A+ + +L GDH QL P + ++ + L ++FERL + D
Sbjct: 712 EAADVLEGPIIPAVFPSLEQLVLIGDHKQLRPGCSTYALRQDPFNLSISMFERLVE--ND 769
Query: 434 EVTSMLTVQYRMHEHIMNWSS---KQLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDME 490
+ LT+Q RMH I S + L + +I + + L
Sbjct: 770 MEYTRLTMQRRMHPQIRRLVSSVYEDLSDYEITKYWPSIPGMGEIRRFFLTHSRI----- 824
Query: 491 EKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKD-DKLK 549
E D S +N EA++ + A LI +GV I +T YAAQ L++ L S+ ++ K
Sbjct: 825 EDNDGFASKINLFEAQMLVQFAVYLINNGVEPQKITCLTFYAAQKDLIERLLSESLNREK 884
Query: 550 N-MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARR 598
+ ++V+TVDG+QG E + +++S+VR+N + EVGFLS R+ V+++RARR
Sbjct: 885 HFIKVATVDGYQGEENDVVLLSLVRNNDRTEVGFLSSPHRVCVSLSRARR 934
Score = 39 (18.8 bits), Expect = 8.4e-17, Sum P(2) = 8.4e-17
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 115 YRLKDSSITVAFDDIPEEGLNSPLRLEKLANEV 147
+ + + + V FD+IPE S ++ L + +
Sbjct: 17 WEMVNKNTEVVFDEIPEPETLSEMKRHPLYSNI 49
>UNIPROTKB|F1RXR7 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:BX321913 Ensembl:ENSSSCT00000001066
Uniprot:F1RXR7
Length = 1211
Score = 188 (71.2 bits), Expect = 8.4e-17, Sum P(3) = 8.4e-17
Identities = 67/209 (32%), Positives = 101/209 (48%)
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK--AHPSGVKRTSSTE--PT----LLLI 482
Y + + L YR H ++ S+ Y+ +++ A P V E P L+
Sbjct: 958 YNPLLVTKLVKNYRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEKLPRKGFPLVFH 1017
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHA---KRLIQSGVHASDIGIITPYAAQVVLLK 539
+ G + E + S N EA M + R + S V A DIG+ITPY QV +K
Sbjct: 1018 GVRGTEAREGRSP--SWFNPTEAVQVMRYCCLLARSVSSQVSAGDIGVITPYRKQVEKIK 1075
Query: 540 ILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK-E-----VGFLSDRRRMNVAV 593
IL ++ L ++V +V+ FQG+E IIIS VRSN + E +GFLS+ +R NVA+
Sbjct: 1076 ILL-RNVGLAEVKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAI 1134
Query: 594 TRARRQCCLVCDTET-VSSDGFLKRLIEY 621
TR + ++ + V D L+EY
Sbjct: 1135 TRPKALLIVLGNPHVLVRQDPCFGALLEY 1163
Score = 91 (37.1 bits), Expect = 8.4e-17, Sum P(3) = 8.4e-17
Identities = 33/84 (39%), Positives = 43/84 (51%)
Query: 352 VVLTTLTGA---VSRKLDNTSFDLVIIDEAAQALEIACWIAL-----LKGSRCILAGDHL 403
VV+TT + A L F V +DEA QA E C I L + G + ILAGD +
Sbjct: 857 VVITTCSSAGLFYQIGLRVGHFTHVFVDEAGQASEPECLIPLGLISDIDG-QIILAGDPM 915
Query: 404 QLPPTVQSVEAEKKGLGRTLFERL 427
QL P ++S A GL ++ ERL
Sbjct: 916 QLGPVIKSRLAMAYGLNVSMLERL 939
Score = 63 (27.2 bits), Expect = 8.4e-17, Sum P(3) = 8.4e-17
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 193 FNSNLDHSQKDAISKALSSKN---VFMLHXXXXXXXXXXVVEIILQ--EVKRGSKILACA 247
FN L+ +Q+ A+ + LS ++L V+E +LQ S+IL CA
Sbjct: 739 FNPMLNENQQLAVKRILSGDCRPLPYVLFGPPGTGKTVTVIEAVLQVFHALPDSRILVCA 798
Query: 248 ASNIAVD 254
SN A D
Sbjct: 799 PSNSAAD 805
>UNIPROTKB|F1NPN9 [details] [associations]
symbol:LOC100857488 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:AADN02030025 IPI:IPI00575663
Ensembl:ENSGALT00000005876 Uniprot:F1NPN9
Length = 1931
Score = 236 (88.1 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 77/242 (31%), Positives = 120/242 (49%)
Query: 345 DVIKNADVVLTTLTGAVSRKLDNTS--FDLVIIDEAAQALEIACWIALL---KGSRCILA 399
D++K VV+T T +LD F +++DEAAQA+E + L K +R +LA
Sbjct: 750 DILKQRVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLA 809
Query: 400 GDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS--MLTVQYRMHEHIMNWSSKQL 457
GDH+QL P V S A ++ L +L +RL + Y E +L YR HE I+N++S+
Sbjct: 810 GDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELF 869
Query: 458 YNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDE---EDSTMNEGEAEVAMAHAKR 514
Y K+ A SG + L G D++EK ++ + E V K
Sbjct: 870 YEGKLMA--SGKQPAHKDFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKW 927
Query: 515 LIQSG-VHASDIGIITPYAAQVVLLKI-LRSKDDKLKNMEVSTVDGFQGREKEAIIISMV 572
+ G + IG++TPYA QV ++ LR K +L ++ V V QG++ + +S V
Sbjct: 928 PVAWGKLDDGSIGVVTPYADQVFRIRAELRKK--RLSDVSVERVLNVQGKQFRVLFLSTV 985
Query: 573 RS 574
R+
Sbjct: 986 RT 987
Score = 64 (27.6 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 574 SNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
S + GFLS+ + +N A+TRA+ +V D + S G ++ E F
Sbjct: 1008 STEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERF 1056
Score = 43 (20.2 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 230 VEIILQEVKRGSKILACAASNIAVD 254
V+ ILQ+ + S+IL C SN A D
Sbjct: 670 VKHILQQ-QDTSRILICTHSNSAAD 693
>UNIPROTKB|F1MKC7 [details] [associations]
symbol:Bt.110099 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:DAAA02049790 EMBL:DAAA02049791
EMBL:DAAA02049792 EMBL:DAAA02049793 EMBL:DAAA02049794
EMBL:DAAA02049795 EMBL:DAAA02049796 EMBL:DAAA02049797
EMBL:DAAA02049798 EMBL:DAAA02049799 IPI:IPI00698970
Ensembl:ENSBTAT00000006233 Uniprot:F1MKC7
Length = 1941
Score = 232 (86.7 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 76/242 (31%), Positives = 121/242 (50%)
Query: 345 DVIKNADVVLTTLTGAVSRKLDNTS--FDLVIIDEAAQALEIACWIALL---KGSRCILA 399
D++K+ VV+T T +LD F +++DEAAQA+E + L + +R +LA
Sbjct: 766 DILKHRVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATRHTRVVLA 825
Query: 400 GDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS--MLTVQYRMHEHIMNWSSKQL 457
GDH+QL P V S A ++ L +L +RL + Y E +L YR HE I+N++S+
Sbjct: 826 GDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELF 885
Query: 458 YNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDE---EDSTMNEGEAEVAMAHAKR 514
Y K+ A SG + L G D++EK ++ + E V K
Sbjct: 886 YEGKLMA--SGKQPAHKEFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKW 943
Query: 515 LIQSG-VHASDIGIITPYAAQVVLLKI-LRSKDDKLKNMEVSTVDGFQGREKEAIIISMV 572
+ G + IG++TPYA QV ++ LR K +L ++ V V QG++ + +S V
Sbjct: 944 PVAWGKLDDGSIGVVTPYADQVFRIRAELRKK--RLSDVNVERVLNVQGKQFRVLFLSTV 1001
Query: 573 RS 574
R+
Sbjct: 1002 RT 1003
Score = 64 (27.6 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 574 SNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
S + GFLS+ + +N A+TRA+ +V D + S G ++ E F
Sbjct: 1024 STEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERF 1072
>MGI|MGI:1925705 [details] [associations]
symbol:Helz "helicase with zinc finger domain" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 MGI:MGI:1925705
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 CTD:9931
HOGENOM:HOG000231202 HOVERGEN:HBG031603 EMBL:AB093209 EMBL:AL645947
EMBL:BC021818 EMBL:BC076626 EMBL:BC130582 EMBL:AK033094
IPI:IPI00453654 IPI:IPI00649664 IPI:IPI00915056 RefSeq:NP_938040.1
UniGene:Mm.272047 UniGene:Mm.394603 UniGene:Mm.490425
ProteinModelPortal:Q6DFV5 SMR:Q6DFV5 IntAct:Q6DFV5 STRING:Q6DFV5
PhosphoSite:Q6DFV5 PaxDb:Q6DFV5 PRIDE:Q6DFV5
Ensembl:ENSMUST00000075012 Ensembl:ENSMUST00000106746 GeneID:78455
KEGG:mmu:78455 UCSC:uc007mav.1 GeneTree:ENSGT00550000074391
InParanoid:Q8BZZ6 NextBio:348914 Bgee:Q6DFV5 Genevestigator:Q6DFV5
Uniprot:Q6DFV5
Length = 1964
Score = 239 (89.2 bits), Expect = 2.2e-16, Sum P(3) = 2.2e-16
Identities = 78/242 (32%), Positives = 121/242 (50%)
Query: 345 DVIKNADVVLTTLTGAVSRKLDNTS--FDLVIIDEAAQALEIACWIALL---KGSRCILA 399
D++K+ VV+T T +LD F V++DEAAQA+E + L K +R +LA
Sbjct: 761 DILKHRVVVVTLSTSQYLCQLDLEPGFFTHVLLDEAAQAMECETIMPLALATKNTRIVLA 820
Query: 400 GDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS--MLTVQYRMHEHIMNWSSKQL 457
GDH+QL P V S A ++ L +L +RL + Y E +L YR HE I+N++S+
Sbjct: 821 GDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELF 880
Query: 458 YNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDE---EDSTMNEGEAEVAMAHAKR 514
Y K+ A SG + L G D++EK ++ + E V K
Sbjct: 881 YEGKLMA--SGKQPAHKDFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKW 938
Query: 515 LIQSG-VHASDIGIITPYAAQVVLLKI-LRSKDDKLKNMEVSTVDGFQGREKEAIIISMV 572
+ G + IG++TPYA QV ++ LR K +L ++ V V QG++ + +S V
Sbjct: 939 PVAWGKLDDGSIGVVTPYADQVFRIRAELRKK--RLSDVNVERVLNVQGKQFRVLFLSTV 996
Query: 573 RS 574
R+
Sbjct: 997 RT 998
Score = 65 (27.9 bits), Expect = 2.2e-16, Sum P(3) = 2.2e-16
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 574 SNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
S + GFLS+ + +N A+TRA+ +V D + S G ++ E F
Sbjct: 1019 STEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPVALCSIGRCRKFWERF 1067
Score = 38 (18.4 bits), Expect = 2.2e-16, Sum P(3) = 2.2e-16
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 233 ILQEVKRGSKILACAASNIAVD 254
ILQ+ + ++IL C SN A D
Sbjct: 685 ILQQQE--TRILICTHSNSAAD 704
>UNIPROTKB|J3QS41 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
HGNC:HGNC:16878 ChiTaRS:HELZ Ensembl:ENST00000580168 Uniprot:J3QS41
Length = 1943
Score = 233 (87.1 bits), Expect = 2.3e-16, Sum P(3) = 2.3e-16
Identities = 76/242 (31%), Positives = 121/242 (50%)
Query: 345 DVIKNADVVLTTLTGAVSRKLDNTS--FDLVIIDEAAQALEIACWIALL---KGSRCILA 399
D++K+ VV+T T +LD F +++DEAAQA+E + L + +R +LA
Sbjct: 762 DILKHRVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLA 821
Query: 400 GDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS--MLTVQYRMHEHIMNWSSKQL 457
GDH+QL P V S A ++ L +L +RL + Y E +L YR HE I+N++S+
Sbjct: 822 GDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELF 881
Query: 458 YNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDE---EDSTMNEGEAEVAMAHAKR 514
Y K+ A SG + L G D++EK ++ + E V K
Sbjct: 882 YEGKLMA--SGKQPAHKDFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKW 939
Query: 515 LIQSG-VHASDIGIITPYAAQVVLLKI-LRSKDDKLKNMEVSTVDGFQGREKEAIIISMV 572
+ G + IG++TPYA QV ++ LR K +L ++ V V QG++ + +S V
Sbjct: 940 PVAWGKLDDGSIGVVTPYADQVFRIRAELRKK--RLSDVNVERVLNVQGKQFRVLFLSTV 997
Query: 573 RS 574
R+
Sbjct: 998 RT 999
Score = 64 (27.6 bits), Expect = 2.3e-16, Sum P(3) = 2.3e-16
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 574 SNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
S + GFLS+ + +N A+TRA+ +V D + S G ++ E F
Sbjct: 1020 STEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERF 1068
Score = 45 (20.9 bits), Expect = 2.3e-16, Sum P(3) = 2.3e-16
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 230 VEIILQEVKRGSKILACAASNIAVD 254
V+ ILQ+ + S+IL C SN A D
Sbjct: 682 VKHILQQ-QETSRILICTHSNSAAD 705
>UNIPROTKB|F1NNW1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA] GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 OMA:VRFFKLD IPI:IPI00594294
EMBL:AADN02045008 Ensembl:ENSGALT00000002368 Uniprot:F1NNW1
Length = 735
Score = 161 (61.7 bits), Expect = 5.0e-09, Sum P(3) = 5.0e-09
Identities = 54/185 (29%), Positives = 95/185 (51%)
Query: 415 EKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSG---VKR 471
E+ L L+ + + Y + + L YR H+ I+ ++ Y+S++KA+ V+
Sbjct: 467 ERLMLHNALYAKSDEGYNPQFVTKLLWNYRSHKAILKVPNELFYDSELKAYEGSEPDVRN 526
Query: 472 TSSTEPTL----LLIDIAG-CDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQS-G------ 519
T L + I G C +E++ + S N E EV + + ++L+QS G
Sbjct: 527 FYCTWEELPNRGVPIIFHGVCGEDEREAKSPSFFNTAEIEVVVQYLQKLLQSQGRRGCPT 586
Query: 520 VHASDIGIITPYAAQVVLLKI-LRSKDDKLK------NMEVSTVDGFQGREKEAIIISMV 572
+ +IGII+PY QV +++ + SKD L+ ++V +V+ FQG+E+ I+IS V
Sbjct: 587 ISPKEIGIISPYRKQVEKIRLAITSKDPVLRALPDIGQLKVGSVEEFQGQERRVILISTV 646
Query: 573 RSNSK 577
RS S+
Sbjct: 647 RSCSE 651
Score = 158 (60.7 bits), Expect = 2.5e-16, Sum P(4) = 2.5e-16
Identities = 44/132 (33%), Positives = 71/132 (53%)
Query: 520 VHASDIGIITPYAAQVVLLKI-LRSKDDKLK------NMEVSTVDGFQGREKEAIIISMV 572
+ +IGII+PY QV +++ + SKD L+ ++V +V+ FQG+E+ I+IS V
Sbjct: 587 ISPKEIGIISPYRKQVEKIRLAITSKDPVLRALPDIGQLKVGSVEEFQGQERRVILISTV 646
Query: 573 RSNSKK-------EVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEH 625
RS S+ +GFL + +R+NVA+TRA+ +V + +S D R + Y +
Sbjct: 647 RSCSEYLQLDQTFRLGFLKNPKRLNVALTRAKALLIVVGNAAVLSKDPHWHRFLRYCRDE 706
Query: 626 AEYLSGSEYLNE 637
Y G Y E
Sbjct: 707 GAY-RGYPYEEE 717
Score = 115 (45.5 bits), Expect = 2.5e-16, Sum P(4) = 2.5e-16
Identities = 47/146 (32%), Positives = 70/146 (47%)
Query: 346 VIKNADVVLTTLTGA---VSRKLDNTSFDLVIIDEAAQALEIACWIALL----------- 391
++K +++TTL A VS F V IDE A+E +A+
Sbjct: 373 LLKPYRILITTLVTAGRLVSANFPPGYFSHVFIDECGHAVEPESVVAIAGLLTTMDPDTN 432
Query: 392 -KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA---DLYG--DE------VTSML 439
G + +LAGD QL P ++S A + GLG +L ERL LY DE VT +L
Sbjct: 433 RNGGQLVLAGDPQQLGPVLRSPLAAQHGLGTSLLERLMLHNALYAKSDEGYNPQFVTKLL 492
Query: 440 TVQYRMHEHIMNWSSKQLYNSKIKAH 465
YR H+ I+ ++ Y+S++KA+
Sbjct: 493 W-NYRSHKAILKVPNELFYDSELKAY 517
Score = 51 (23.0 bits), Expect = 2.5e-16, Sum P(4) = 2.5e-16
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 138 LRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGL-IPVLFGEQKPTVLKKDIAFKPFNSN 196
L LE++ E+ RR +Q VQN L +P + E +P+VL+ D F +S
Sbjct: 109 LHLEEIQLEMDIRRYD---LQEVPMVQNRALLLLNVPGV-AENRPSVLRGDHLFASLSSE 164
Query: 197 LDHSQK 202
D S +
Sbjct: 165 RDSSPR 170
Score = 47 (21.6 bits), Expect = 2.5e-16, Sum P(4) = 2.5e-16
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 229 VVEIILQ--EVKRGSKILACAASNIAVD 254
+VE I Q + ++ILACA SN A D
Sbjct: 294 LVEAIKQVWSCFKDARILACAPSNSAAD 321
>UNIPROTKB|F1RSM3 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:CU466377 EMBL:CU639426 EMBL:CU929837 RefSeq:XP_003131321.1
UniGene:Ssc.13421 Ensembl:ENSSSCT00000018802 GeneID:100524104
KEGG:ssc:100524104 Uniprot:F1RSM3
Length = 1944
Score = 237 (88.5 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 77/242 (31%), Positives = 121/242 (50%)
Query: 345 DVIKNADVVLTTLTGAVSRKLDNTS--FDLVIIDEAAQALEIACWIALL---KGSRCILA 399
D++K+ VV+T T +LD F +++DEAAQA+E + L K +R +LA
Sbjct: 761 DILKHRVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLA 820
Query: 400 GDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS--MLTVQYRMHEHIMNWSSKQL 457
GDH+QL P V S A ++ L +L +RL + Y E +L YR HE I+N++S+
Sbjct: 821 GDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELF 880
Query: 458 YNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDE---EDSTMNEGEAEVAMAHAKR 514
Y K+ A SG + L G D++EK ++ + E V K
Sbjct: 881 YEGKLMA--SGKQPAHKDFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKW 938
Query: 515 LIQSG-VHASDIGIITPYAAQVVLLKI-LRSKDDKLKNMEVSTVDGFQGREKEAIIISMV 572
+ G + IG++TPYA QV ++ LR K +L ++ V V QG++ + +S V
Sbjct: 939 PVAWGKLDDGSIGVVTPYADQVFRIRAELRKK--RLSDVNVERVLNVQGKQFRVLFLSTV 996
Query: 573 RS 574
R+
Sbjct: 997 RT 998
Score = 64 (27.6 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 574 SNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
S + GFLS+ + +N A+TRA+ +V D + S G ++ E F
Sbjct: 1019 STEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERF 1067
Score = 40 (19.1 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 230 VEIILQEVKRGSKILACAASNIAVD 254
V+ ILQ+ + ++IL C SN A D
Sbjct: 682 VKHILQQQE--TRILICTHSNSAAD 704
Score = 39 (18.8 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 15/68 (22%), Positives = 32/68 (47%)
Query: 300 DIRKEMKALNGKLLKTKDKNTRRE---------IQKELRTLSKEERKRQQLAVTDVIKNA 350
++ + K +L+K K +N ++ I+K + +LS E+ + + +V N
Sbjct: 207 ELAEWQKRYASRLIKLKQQNENKQLSGSYMETLIEKWMNSLSPEKVLSECIEGVEVEHNP 266
Query: 351 DVVLTTLT 358
D+ +T T
Sbjct: 267 DLSVTVNT 274
>UNIPROTKB|E2R8C1 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:AAEX03006372 EMBL:AAEX03006373 EMBL:AAEX03006374
RefSeq:XP_862371.2 Ensembl:ENSCAFT00000018141 GeneID:490907
KEGG:cfa:490907 Uniprot:E2R8C1
Length = 1944
Score = 237 (88.5 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 77/242 (31%), Positives = 121/242 (50%)
Query: 345 DVIKNADVVLTTLTGAVSRKLDNTS--FDLVIIDEAAQALEIACWIALL---KGSRCILA 399
D++K+ VV+T T +LD F +++DEAAQA+E + L K +R +LA
Sbjct: 761 DILKHRVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLA 820
Query: 400 GDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS--MLTVQYRMHEHIMNWSSKQL 457
GDH+QL P V S A ++ L +L +RL + Y E +L YR HE I+N++S+
Sbjct: 821 GDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELF 880
Query: 458 YNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDE---EDSTMNEGEAEVAMAHAKR 514
Y K+ A SG + L G D++EK ++ + E V K
Sbjct: 881 YEGKLMA--SGKQPAHKDFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKW 938
Query: 515 LIQSG-VHASDIGIITPYAAQVVLLKI-LRSKDDKLKNMEVSTVDGFQGREKEAIIISMV 572
+ G + IG++TPYA QV ++ LR K +L ++ V V QG++ + +S V
Sbjct: 939 PVAWGKLDDGSIGVVTPYADQVFRIRAELRKK--RLSDVNVERVLNVQGKQFRVLFLSTV 996
Query: 573 RS 574
R+
Sbjct: 997 RT 998
Score = 64 (27.6 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 574 SNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
S + GFLS+ + +N A+TRA+ +V D + S G ++ E F
Sbjct: 1019 STEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERF 1067
Score = 40 (19.1 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 230 VEIILQEVKRGSKILACAASNIAVD 254
V+ ILQ+ + ++IL C SN A D
Sbjct: 682 VKHILQQQE--TRILICTHSNSAAD 704
>FB|FBgn0034187 [details] [associations]
symbol:CG6967 species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS] UCSC:CG6967-RC
FlyBase:FBgn0034187 NextBio:801049 EMBL:AY119610
ProteinModelPortal:Q8MRI1 PRIDE:Q8MRI1 InParanoid:Q8MRI1
PhylomeDB:Q8MRI1 ArrayExpress:Q8MRI1 Bgee:Q8MRI1 Uniprot:Q8MRI1
Length = 825
Score = 234 (87.4 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 93/308 (30%), Positives = 145/308 (47%)
Query: 346 VIKNADVVLTTLTGA--VSRKLDNTSFDL-VIIDEAAQALEIACWIALL---KGSRC--I 397
++K +V T T A V+ L +F + IDEA + E I ++ + + C I
Sbjct: 444 IVKYGIIVATLCTVARLVTDTLGRYNFFTHIFIDEAGASTEPEALIGIMGIKQTADCHVI 503
Query: 398 LAGDHLQLPPTVQSVEAEKKGLGRTLFERL--ADLY-GDEVTSM-------LTVQYRMHE 447
L+GDH QL ++S A GL R+L ERL +D Y DE + L YR H
Sbjct: 504 LSGDHKQLGAVIKSNRAASLGLSRSLMERLLQSDCYKSDENGNYDRNRQMRLCRNYRSHP 563
Query: 448 HIMNWSSKQLYNSKIKAH-PS-GVKRTSS----TEPTLLLIDIAGCDMEEKKDEEDSTMN 501
I+ ++ YN ++KA P+ V ++ T P +I A + ++ S+ N
Sbjct: 564 QIVRLFNELYYNGELKAQAPAMDVNLAANWSVLTNPQFPIIFQATHGVTNREQNSTSSYN 623
Query: 502 EGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQG 561
EAEV + KRLI V + I L + N+EV +V+ +QG
Sbjct: 624 NLEAEVICWYVKRLINDRVVGQEDVGIVAPYTAQGKLVTKLLQSKGYPNVEVGSVETYQG 683
Query: 562 REKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEY 621
REK II S+V+S + +GF+ + RR+NV ++RA+ LV + T+ K +I
Sbjct: 684 REKTIIIASLVKSFTN--MGFMCNPRRVNVLLSRAKALLILVGNPVTLRHHSDFKFVINE 741
Query: 622 FEEHAEYL 629
++H YL
Sbjct: 742 CKKHGTYL 749
>UNIPROTKB|P42694 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 HOVERGEN:HBG031603
OrthoDB:EOG4NP72K EMBL:D29677 EMBL:AC005544 EMBL:AC007448
IPI:IPI00000897 UniGene:Hs.370140 UniGene:Hs.569824
ProteinModelPortal:P42694 SMR:P42694 IntAct:P42694 STRING:P42694
PhosphoSite:P42694 DMDM:221222452 PaxDb:P42694 PRIDE:P42694
Ensembl:ENST00000358691 UCSC:uc002jfx.4 GeneCards:GC17M065066
HGNC:HGNC:16878 HPA:HPA028276 MIM:606699 neXtProt:NX_P42694
InParanoid:P42694 OMA:YRVALLY ChiTaRS:HELZ ArrayExpress:P42694
Bgee:P42694 CleanEx:HS_HELZ Genevestigator:P42694
GermOnline:ENSG00000198265 Uniprot:P42694
Length = 1942
Score = 233 (87.1 bits), Expect = 7.4e-16, Sum P(3) = 7.4e-16
Identities = 76/242 (31%), Positives = 121/242 (50%)
Query: 345 DVIKNADVVLTTLTGAVSRKLDNTS--FDLVIIDEAAQALEIACWIALL---KGSRCILA 399
D++K+ VV+T T +LD F +++DEAAQA+E + L + +R +LA
Sbjct: 761 DILKHRVVVVTLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLA 820
Query: 400 GDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS--MLTVQYRMHEHIMNWSSKQL 457
GDH+QL P V S A ++ L +L +RL + Y E +L YR HE I+N++S+
Sbjct: 821 GDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELF 880
Query: 458 YNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDE---EDSTMNEGEAEVAMAHAKR 514
Y K+ A SG + L G D++EK ++ + E V K
Sbjct: 881 YEGKLMA--SGKQPAHKDFYPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKW 938
Query: 515 LIQSG-VHASDIGIITPYAAQVVLLKI-LRSKDDKLKNMEVSTVDGFQGREKEAIIISMV 572
+ G + IG++TPYA QV ++ LR K +L ++ V V QG++ + +S V
Sbjct: 939 PVAWGKLDDGSIGVVTPYADQVFRIRAELRKK--RLSDVNVERVLNVQGKQFRVLFLSTV 996
Query: 573 RS 574
R+
Sbjct: 997 RT 998
Score = 64 (27.6 bits), Expect = 7.4e-16, Sum P(3) = 7.4e-16
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 574 SNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
S + GFLS+ + +N A+TRA+ +V D + S G ++ E F
Sbjct: 1019 STEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERF 1067
Score = 40 (19.1 bits), Expect = 7.4e-16, Sum P(3) = 7.4e-16
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 230 VEIILQEVKRGSKILACAASNIAVD 254
V+ ILQ+ + ++IL C SN A D
Sbjct: 682 VKHILQQQE--TRILICTHSNSAAD 704
>RGD|1589127 [details] [associations]
symbol:LOC684558 "similar to regulator of nonsense transcripts
1" species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0044530 "supraspliceosomal complex" evidence=IEA]
[GO:0071044 "histone mRNA catabolic process" evidence=IEA]
GO:GO:0006260 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 IPI:IPI00767398
PRIDE:F1LY19 Ensembl:ENSRNOT00000027268 Uniprot:F1LY19
Length = 391
Score = 225 (84.3 bits), Expect = 8.4e-16, P = 8.4e-16
Identities = 54/147 (36%), Positives = 82/147 (55%)
Query: 490 EEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKILRSKD 545
EE S +N EA +L+++G IGIITPY Q V ++ S
Sbjct: 28 EEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLH 87
Query: 546 DKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR +V
Sbjct: 88 TKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVG 147
Query: 605 DTETVSSDGFLKRLIEYFEEHAEYLSG 631
+ + +S L+ Y++E + G
Sbjct: 148 NPKALSKQPLWNHLLSYYKEQKALVEG 174
>UNIPROTKB|Q5ZKD7 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4
CTD:4343 EMBL:AJ720147 IPI:IPI00594294 RefSeq:NP_001012861.1
UniGene:Gga.1182 ProteinModelPortal:Q5ZKD7 STRING:Q5ZKD7
PRIDE:Q5ZKD7 GeneID:419872 KEGG:gga:419872 InParanoid:Q5ZKD7
NextBio:20822865 Uniprot:Q5ZKD7
Length = 967
Score = 161 (61.7 bits), Expect = 7.2e-09, Sum P(3) = 7.2e-09
Identities = 54/185 (29%), Positives = 95/185 (51%)
Query: 415 EKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSG---VKR 471
E+ L L+ + + Y + + L YR H+ I+ ++ Y+S++KA+ V+
Sbjct: 699 ERLMLHNALYAKSDEGYNPQFVTKLLWNYRSHKAILKVPNELFYDSELKAYEGSEPDVRN 758
Query: 472 TSSTEPTL----LLIDIAG-CDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQS-G------ 519
T L + I G C +E++ + S N E EV + + ++L+QS G
Sbjct: 759 FYCTWEELPNRGVPIIFHGVCGEDEREAKSPSFFNTAEIEVVVQYLQKLLQSQGRRGCPT 818
Query: 520 VHASDIGIITPYAAQVVLLKI-LRSKDDKLK------NMEVSTVDGFQGREKEAIIISMV 572
+ +IGII+PY QV +++ + SKD L+ ++V +V+ FQG+E+ I+IS V
Sbjct: 819 ISPKEIGIISPYRKQVEKIRLAITSKDPVLRALPDIGQLKVGSVEEFQGQERRVILISTV 878
Query: 573 RSNSK 577
RS S+
Sbjct: 879 RSCSE 883
Score = 158 (60.7 bits), Expect = 1.0e-15, Sum P(4) = 1.0e-15
Identities = 44/132 (33%), Positives = 71/132 (53%)
Query: 520 VHASDIGIITPYAAQVVLLKI-LRSKDDKLK------NMEVSTVDGFQGREKEAIIISMV 572
+ +IGII+PY QV +++ + SKD L+ ++V +V+ FQG+E+ I+IS V
Sbjct: 819 ISPKEIGIISPYRKQVEKIRLAITSKDPVLRALPDIGQLKVGSVEEFQGQERRVILISTV 878
Query: 573 RSNSKK-------EVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEH 625
RS S+ +GFL + +R+NVA+TRA+ +V + +S D R + Y +
Sbjct: 879 RSCSEYLQLDQTFRLGFLKNPKRLNVALTRAKALLIVVGNAAVLSKDPHWHRFLRYCRDE 938
Query: 626 AEYLSGSEYLNE 637
Y G Y E
Sbjct: 939 GAY-RGYPYEEE 949
Score = 112 (44.5 bits), Expect = 1.0e-15, Sum P(4) = 1.0e-15
Identities = 47/146 (32%), Positives = 69/146 (47%)
Query: 346 VIKNADVVLTTLTGA---VSRKLDNTSFDLVIIDEAAQALEIACWIALL----------- 391
++K +++TTL A VS F V IDE A+E +A+
Sbjct: 605 LLKPYRILITTLVTAGRLVSANFPPGYFSHVFIDECGHAVEPESVVAIAGLLTTMDPDTN 664
Query: 392 -KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA---DLYG--DE------VTSML 439
G + +LAGD QL P +S A + GLG +L ERL LY DE VT +L
Sbjct: 665 PNGGQLVLAGDPQQLGPVPRSPLAAQHGLGTSLLERLMLHNALYAKSDEGYNPQFVTKLL 724
Query: 440 TVQYRMHEHIMNWSSKQLYNSKIKAH 465
YR H+ I+ ++ Y+S++KA+
Sbjct: 725 W-NYRSHKAILKVPNELFYDSELKAY 749
Score = 54 (24.1 bits), Expect = 1.0e-15, Sum P(4) = 1.0e-15
Identities = 22/66 (33%), Positives = 32/66 (48%)
Query: 138 LRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGL-IPVLFGEQKPTVLKKDIAFKPFNSN 196
L LE++ EV RR +Q VQN L +P + E +P+VL+ D F +S
Sbjct: 341 LHLEEIQLEVDIRRYD---LQEVPMVQNRALLLLNVPGV-AENRPSVLRGDHLFASLSSE 396
Query: 197 LDHSQK 202
D S +
Sbjct: 397 RDSSPR 402
Score = 47 (21.6 bits), Expect = 1.0e-15, Sum P(4) = 1.0e-15
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 229 VVEIILQ--EVKRGSKILACAASNIAVD 254
+VE I Q + ++ILACA SN A D
Sbjct: 526 LVEAIKQVWSCFKDARILACAPSNSAAD 553
>MGI|MGI:97054 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISO] InterPro:IPR003593 SMART:SM00382
MGI:MGI:97054 GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
HOVERGEN:HBG052500 EMBL:X52574 EMBL:AK004542 EMBL:BC053743
EMBL:X75819 IPI:IPI00130328 PIR:A39611 RefSeq:NP_001156912.1
RefSeq:NP_001156913.1 RefSeq:NP_032645.2 UniGene:Mm.1597
ProteinModelPortal:P23249 SMR:P23249 DIP:DIP-48575N STRING:P23249
PhosphoSite:P23249 PaxDb:P23249 PRIDE:P23249
Ensembl:ENSMUST00000168015 GeneID:17454 KEGG:mmu:17454
NextBio:292100 Bgee:P23249 Genevestigator:P23249
GermOnline:ENSMUSG00000002227 Uniprot:P23249
Length = 1004
Score = 158 (60.7 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 49/161 (30%), Positives = 85/161 (52%)
Query: 490 EEKKDEEDSTMNEGEAEVAMAHAKRLI----QSG---VHASDIGIITPYAAQV-----VL 537
+E++ S N EA ++ K+L+ + G + ++G+I+PY QV +
Sbjct: 786 DEREGNSPSFFNPEEAATVTSYLKQLLAPSSKKGKARLSPRNVGVISPYRKQVEKIRYCI 845
Query: 538 LKI---LRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK-------EVGFLSDRR 587
K+ LR DD +K+++V +V+ FQG+E+ I+IS VRS+ +GFL + +
Sbjct: 846 TKLDRELRGLDD-IKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPK 904
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEY 628
R NVAVTRA+ +V + + D K +E+ +E+ Y
Sbjct: 905 RFNVAVTRAKALLIVVGNPLLLGHDPDWKTFLEFCKENGGY 945
Score = 108 (43.1 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 57/227 (25%), Positives = 99/227 (43%)
Query: 322 REIQKELRTLSKEERKRQQLA--VTDVIKNADVVLTTLTGA---VSRKLDNTSFDLVIID 376
R + ++++T + K+ + ++ V++TTL A VS + F + ID
Sbjct: 587 RMVPEDIKTCCNWDAKKGEYVYPAKKHLQQYRVLITTLITASRLVSAQFPIDHFTHIFID 646
Query: 377 EAAQALEIACWIAL-----LK-----GSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFER 426
EA +E +A+ +K G + +LAGD QL P ++S A K GLG +L ER
Sbjct: 647 EAGHCMEPESLVAIAGLMDVKETGNPGGQLVLAGDPRQLGPVLRSPLALKHGLGYSLLER 706
Query: 427 LA---DLY--GDE------VTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT--- 472
L LY G +T +L YR H I++ ++ Y+ +++A V R
Sbjct: 707 LLAYNSLYKKGPNGYDPQFITKLLR-NYRSHPTILDIPNQLYYDGELQACADVVDRERFC 765
Query: 473 ---SSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLI 516
+ +I +E++ S N EA ++ K+L+
Sbjct: 766 RWEGLPQQGFPIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKQLL 812
Score = 63 (27.2 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 27/93 (29%), Positives = 43/93 (46%)
Query: 171 LIPVLF--GEQKPTVLKKDIAFKPFNSNLDHS--QKDA---ISKALSSKNVFMLHXXXXX 223
L P+LF + ++L D+ FK ++ +L+ + Q A I + + +++
Sbjct: 470 LWPMLFPVASRGVSLLPSDVKFKLYDRSLESNPEQLQAMKHIVRGTTRPAPYIIFGPPGT 529
Query: 224 XXXXXVVEIILQEVKRGSK--ILACAASNIAVD 254
+VE I Q VK K ILACA SN D
Sbjct: 530 GKTVTLVEAIKQVVKHLPKAHILACAPSNSGAD 562
>ZFIN|ZDB-GENE-040426-2419 [details] [associations]
symbol:helz "helicase with zinc finger"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR011539 InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 ZFIN:ZDB-GENE-040426-2419 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 GO:GO:0003676
GO:GO:0004386 eggNOG:COG1112 EMBL:BC066461 IPI:IPI00500029
RefSeq:NP_998431.1 UniGene:Dr.35354 ProteinModelPortal:Q6NYU2
GeneID:406550 KEGG:dre:406550 CTD:9931 HOGENOM:HOG000231202
HOVERGEN:HBG031603 OrthoDB:EOG4NP72K NextBio:20818112
ArrayExpress:Q6NYU2 Uniprot:Q6NYU2
Length = 1860
Score = 227 (85.0 bits), Expect = 4.6e-15, Sum P(3) = 4.6e-15
Identities = 75/242 (30%), Positives = 119/242 (49%)
Query: 345 DVIKNADVVLTTLTGAVSRKLDNTS--FDLVIIDEAAQALEIACWIAL---LKGSRCILA 399
DV ++ VV+T T +LD F +++DEAAQA+E + L +K +R +LA
Sbjct: 754 DVERHRVVVVTLSTSQYLCQLDLEPGIFTHILLDEAAQAMECETIMPLALAVKSTRVVLA 813
Query: 400 GDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS--MLTVQYRMHEHIMNWSSKQL 457
GDH+QL P V S A ++ L +L +RL + Y E +L YR HE I+N++S
Sbjct: 814 GDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPSEYPCRILLCENYRSHEAIINYTSDLF 873
Query: 458 YNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDE---EDSTMNEGEAEVAMAHAKR 514
Y K+ A SG + L G D++EK ++ + E V K
Sbjct: 874 YEGKLMA--SGKQPPHKDFYPLTFFTARGEDVQEKNSTAYYNNAEVFEIVERVEEMRKKW 931
Query: 515 LIQSG-VHASDIGIITPYAAQVVLLKI-LRSKDDKLKNMEVSTVDGFQGREKEAIIISMV 572
+ G + IG+++PYA QV ++ LR K ++ + V V QG++ + +S V
Sbjct: 932 PVSWGKLEEGSIGVVSPYADQVFRIRAELRKK--RMSEVSVERVLNVQGKQFRVLFLSTV 989
Query: 573 RS 574
R+
Sbjct: 990 RT 991
Score = 64 (27.6 bits), Expect = 4.6e-15, Sum P(3) = 4.6e-15
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 574 SNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
S + GFLS+ + +N A+TRA+ +V D + S G ++ E F
Sbjct: 1012 STEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWETF 1060
Score = 38 (18.4 bits), Expect = 4.6e-15, Sum P(3) = 4.6e-15
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 230 VEIILQEVKRGSKILACAASNIAVD 254
V+ IL++ + S++L C SN A D
Sbjct: 675 VKHILKQPE--SRVLICTHSNSAAD 697
>ZFIN|ZDB-GENE-060526-371 [details] [associations]
symbol:mov10b.2 "Moloney leukemia virus 10,
homolog, b.2" species:7955 "Danio rerio" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0035279 "mRNA cleavage
involved in gene silencing by miRNA" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] ZFIN:ZDB-GENE-060526-371
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0000932
GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:BX323059
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 IPI:IPI00611260
RefSeq:NP_001037805.1 UniGene:Dr.94434 ProteinModelPortal:Q1LXK5
Ensembl:ENSDART00000078491 GeneID:555950 KEGG:dre:555950 CTD:555950
InParanoid:Q1LXK5 NextBio:20881245 Uniprot:Q1LXK5
Length = 1015
Score = 157 (60.3 bits), Expect = 6.1e-15, Sum P(3) = 6.1e-15
Identities = 44/124 (35%), Positives = 68/124 (54%)
Query: 518 SGVHASDIGIITPYAAQVVLLK--ILRSKDDK----LKNMEVSTVDGFQGREKEAIIISM 571
S + DIGII PY QV +K I KD + + N++V +V+ FQG+E++ I++S
Sbjct: 847 SRIFPKDIGIIAPYRKQVEKIKRAIDADKDFQDYMGIDNLKVGSVEEFQGQERKVIMVST 906
Query: 572 VRSNSKK-------EVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
VRS+ K +GFL + +R NVAVTRA+ +V + + +D R I++ E
Sbjct: 907 VRSSVKYISLDETFNIGFLKNEKRFNVAVTRAKSLLIMVGNPMILRTDESWGRFIDFCLE 966
Query: 625 HAEY 628
Y
Sbjct: 967 RGGY 970
Score = 110 (43.8 bits), Expect = 6.1e-15, Sum P(3) = 6.1e-15
Identities = 47/170 (27%), Positives = 77/170 (45%)
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA---VSRKLDNTS 369
L +N +++I K L+ + + + + + +++ TL A V+
Sbjct: 612 LYASSRN-QKDIPKILKDNCNVDEEMIDFPCKEDLMSYKILICTLVTAGRLVTGGFSEDH 670
Query: 370 FDLVIIDEAAQALEIACWIA---LLKGSR--CILAGDHLQLPPTVQSVEAEKKGLGRTLF 424
F +DEA A+E I+ LL + +LAGD QL P ++S A GL +L
Sbjct: 671 FTHNFVDEAGHAVESETIISVAGLLNAEKGQLVLAGDPKQLGPILRSPLAINHGLDVSLL 730
Query: 425 ERLA---DLY--GD-----EVTSMLTVQYRMHEHIMNWSSKQLYNSKIKA 464
ERL DLY GD S L + YR H +I+ ++ Y+ ++KA
Sbjct: 731 ERLMTQNDLYKRGDVEFDNRYVSKLIMNYRSHPYILEVPNRLFYDGELKA 780
Score = 56 (24.8 bits), Expect = 6.1e-15, Sum P(3) = 6.1e-15
Identities = 43/204 (21%), Positives = 82/204 (40%)
Query: 63 DAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSI 122
D LMG L + VL G H +++ K + + +G V+R++ +
Sbjct: 402 DRDKRLMGLNLPGVSENRPSVLR----GDH-LLLTKSEEVTFSNVTKYKGYVHRVELDQV 456
Query: 123 TVAFDD--IPEEGLNS-PLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQ 179
+ + + ++ R+E N + R ++ + ++ VQ+ L P+
Sbjct: 457 KLGLSKRFLKDVYIDKMKFRVEFTVNRIPVR-LQHRAVHMA--VQHNLKDVLFPMASRSL 513
Query: 180 KPTVLKKDIAFKPFNSNLDHS--QKDAISKALS--SKNV-FMLHXXXXXXXXXXVVEIIL 234
P A + F+ L+++ Q A+ ++ SK +++ +VE I
Sbjct: 514 NPV---SPPALRLFDRKLEYNFQQYSAVCNIVAGTSKPAPYLVFGPPGTGKTVTIVEAIK 570
Query: 235 QEVKR--GSKILACAASNIAVDNI 256
Q K + ILACA SN A D +
Sbjct: 571 QVEKNIPDAYILACAPSNSAADQL 594
>RGD|1598327 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10116 "Rattus
norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA;ISO] InterPro:IPR003593 SMART:SM00382
RGD:1598327 GO:GO:0005524 GO:GO:0017111 GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:CH474015 OrthoDB:EOG4SXNC4
CTD:4343 IPI:IPI00192859 RefSeq:NP_001101181.1 UniGene:Rn.3508
Ensembl:ENSRNOT00000018061 GeneID:310756 KEGG:rno:310756
UCSC:RGD:1598327 NextBio:662562 Uniprot:D3ZUC2
Length = 1004
Score = 154 (59.3 bits), Expect = 6.1e-15, Sum P(3) = 6.1e-15
Identities = 48/161 (29%), Positives = 84/161 (52%)
Query: 490 EEKKDEEDSTMNEGEAEVAMAHAKRLI----QSG---VHASDIGIITPYAAQV-----VL 537
+E++ S N EA ++ ++L+ + G + +G+I+PY QV +
Sbjct: 786 DEREGNSPSFFNPEEAATVTSYLRQLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCI 845
Query: 538 LKI---LRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK-------EVGFLSDRR 587
K+ LR DD +K+++V +V+ FQG+E+ I+IS VRS+ +GFL + +
Sbjct: 846 TKLDRELRGLDD-IKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPK 904
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEY 628
R NVAVTRA+ +V + + D K +E+ +E+ Y
Sbjct: 905 RFNVAVTRAKALLIVVGNPLLLGHDPDWKTFLEFCKENGGY 945
Score = 111 (44.1 bits), Expect = 6.1e-15, Sum P(3) = 6.1e-15
Identities = 49/176 (27%), Positives = 83/176 (47%)
Query: 322 REIQKELRTLSKEERKRQQLA--VTDVIKNADVVLTTLTGA---VSRKLDNTSFDLVIID 376
R + ++++T + K+ + ++ V++TTL A VS + F + ID
Sbjct: 587 RMVPEDIKTCCNWDPKKGEYVYPAKKHLQQYRVLITTLITASRLVSAQFPIDHFTHIFID 646
Query: 377 EAAQALEIACWIAL-----LK-----GSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFER 426
EA +E +A+ +K G + +LAGD QL P ++S A+K GLG +L ER
Sbjct: 647 EAGHCMEPESLVAIAGLMDVKETGNPGGQLVLAGDPRQLGPVLRSPLAQKHGLGYSLLER 706
Query: 427 LA---DLY--GDE------VTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
L LY G +T +L YR H I++ ++ Y+ +++A V R
Sbjct: 707 LLTYNSLYKKGPNGYDPQFITKLLR-NYRSHPTILDIPNQLYYDGELQACADVVDR 761
Score = 58 (25.5 bits), Expect = 6.1e-15, Sum P(3) = 6.1e-15
Identities = 26/93 (27%), Positives = 41/93 (44%)
Query: 171 LIPVLF--GEQKPTVLKKDIAFKPFNSNLDHS--QKDA---ISKALSSKNVFMLHXXXXX 223
L P LF + ++L D+ FK ++ +L+ + Q A I + + +++
Sbjct: 470 LWPTLFPVASRGVSLLPSDVKFKLYDRSLESNPEQLQAMKHIVRGTTRPAPYIIFGPPGT 529
Query: 224 XXXXXVVEIILQEVKRGSK--ILACAASNIAVD 254
+VE I Q VK K ILAC SN D
Sbjct: 530 GKTVTLVEAIKQVVKHLPKAHILACTPSNSGAD 562
Score = 38 (18.4 bits), Expect = 6.6e-13, Sum P(3) = 6.6e-13
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 178 EQKPTVLKKDIAFKPFNSNLDHSQKDAIS 206
E +P+VL+ D F +S + Q+D ++
Sbjct: 387 ESRPSVLRGDHLFALLSSEIQ--QEDPVT 413
>UNIPROTKB|F6QXW0 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000076 "DNA replication checkpoint" evidence=ISS]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0004518 "nuclease activity"
evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
[GO:0017108 "5'-flap endonuclease activity" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=ISS] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISS] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0051539 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043139 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH EMBL:AAMC01051984
EMBL:AAMC01051985 EMBL:AAMC01051986 Ensembl:ENSXETT00000016310
Uniprot:F6QXW0
Length = 1048
Score = 193 (73.0 bits), Expect = 6.3e-15, Sum P(3) = 6.3e-15
Identities = 50/129 (38%), Positives = 77/129 (59%)
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN--M 551
+E+ N EA++ K +++G SDIGII PY Q LK++ + + L +
Sbjct: 901 EEKGGISNWIEAKLVFCLTKLFLKAGCRPSDIGIIAPYRQQ---LKVISNYFNSLSASAV 957
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVG-FLSDRRRMNVAVTRARRQCCLVCDTETVS 610
EV+TVD +QGR+K II+S VRSN ++G L D RR+NVA+TRA+ + ++ T+S
Sbjct: 958 EVNTVDKYQGRDKSVIIVSFVRSNIDGKLGDLLKDWRRLNVALTRAKHKLIMLGCVPTLS 1017
Query: 611 SDGFLKRLI 619
L++LI
Sbjct: 1018 RFLCLEQLI 1026
Score = 88 (36.0 bits), Expect = 6.3e-15, Sum P(3) = 6.3e-15
Identities = 31/91 (34%), Positives = 43/91 (47%)
Query: 396 CILAGDHLQ-LPPTVQSVEAEKK-GLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWS 453
C A H Q V+SV ++ G+ +LF+RL E LTVQYRM+ IM S
Sbjct: 776 CAFALIHHQCFKGCVKSVSLVRELGMSESLFKRLER--NQEAVVQLTVQYRMNSQIMALS 833
Query: 454 SKQLYNSKIKAHPSGVKRTSSTEP---TLLL 481
+K +Y +++ V P TLLL
Sbjct: 834 NKLVYEGRLECASDRVSNAVVKLPHIKTLLL 864
Score = 40 (19.1 bits), Expect = 6.3e-15, Sum P(3) = 6.3e-15
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 314 KTKDKNTRREIQK 326
K+KDK+TR+ I K
Sbjct: 31 KSKDKSTRKIIPK 43
Score = 38 (18.4 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 137 PLRLE--KLANEVTYRRMKDALIQLSKGVQNGPAAGLI 172
PL L+ K +N + +R LS+ + P AGL+
Sbjct: 297 PLELKTGKESNSIEHRSQVVLYTLLSQERREDPEAGLL 334
>UNIPROTKB|E1C0Z0 [details] [associations]
symbol:HELZ2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 SMART:SM00355
SMART:SM00955 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
GO:GO:0004386 GO:GO:0004540 OMA:FRAAHIM PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 EMBL:AADN02019144 IPI:IPI00594758
Ensembl:ENSGALT00000009906 Uniprot:E1C0Z0
Length = 2565
Score = 230 (86.0 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 80/283 (28%), Positives = 137/283 (48%)
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
++ ++ T EI++ TL E + +LA DVI L T + A + L+ +
Sbjct: 2221 VRAGEEITEEEIKQHKHTLM--EARAYELACHDVI------LCTCSSASAGSLEKLNVKQ 2272
Query: 373 VIIDEAAQALEIACWIALLK---GSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
++IDE A + E I L+ + +L GDH QL P V + + G+ +LFER
Sbjct: 2273 ILIDECAMSTEPETLIPLVSHKHAEKVVLLGDHKQLKPVVNNDFCKSLGMETSLFER--- 2329
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK-------RTSSTEPTLLLI 482
Y + ML QYRMH++I + S++ Y ++K P ++ + + P ++
Sbjct: 2330 -YQKQAW-MLDTQYRMHKNICEFPSQEFYEHRLKTCPQLLRIPSVLYHKNNRCCP-IIFG 2386
Query: 483 DIAGCD----MEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG-VHASDIGIITPYAAQVVL 537
+ G + + ++ E+S N E E A+ AK+L G + I I++PY AQV
Sbjct: 2387 HVEGKEQSLVISTEEGNENSKANPEEVEQAVRTAKQLTLDGTIRPQSIAILSPYNAQVSE 2446
Query: 538 LKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEV 580
+ R + ++ + V T+ QG E +I+S VRS S+ E+
Sbjct: 2447 IN-KRLLKEGIRGVTVCTIMKSQGSEWRYVILSTVRSCSRHEI 2488
Score = 172 (65.6 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 48/156 (30%), Positives = 82/156 (52%)
Query: 492 KKDEEDSTMNEGEAEVAMAHAKRLIQSG-VHASDIGIITPYAAQVVLLKILRSKDDKLKN 550
++ E+S N E E A+ AK+L G + I I++PY AQV + R + ++
Sbjct: 2400 EEGNENSKANPEEVEQAVRTAKQLTLDGTIRPQSIAILSPYNAQVSEIN-KRLLKEGIRG 2458
Query: 551 MEVSTVDGFQGREKEAIIISMVRSNS-------------KKEVGFLSDRRRMNVAVTRAR 597
+ V T+ QG E +I+S VRS S KK +GF++D ++NVA+TRA+
Sbjct: 2459 VTVCTIMKSQGSEWRYVILSTVRSCSRHEIDKKPTKSWQKKHLGFVTDPNQVNVAITRAQ 2518
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSE 633
C++ + + + +RL++++ +H Y SG E
Sbjct: 2519 EGLCIIGNRYLLECNPLWRRLLQHYIDHNCYTSGQE 2554
Score = 147 (56.8 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 76/281 (27%), Positives = 121/281 (43%)
Query: 331 LSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIAL 390
L+K++R + ++ K+ +++TT + K+ F ++IDEAAQ LE I L
Sbjct: 620 LTKDQRSFRHPTREEIDKHP-IIITTSMLSKHLKVAPGYFTHIMIDEAAQMLECEALIPL 678
Query: 391 LKGS---RCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDE-----VTSMLTVQ 442
+ R +LAGDH+Q+ P + V A+ + TL RL Y E + S +
Sbjct: 679 SYATFETRIVLAGDHMQITPKLFCV-ADGQSAYHTLLNRLFQFYQKEKHEVAMKSRIIFN 737
Query: 443 --YRMHEHIMNWSSKQLYNSKIKA-HPSG-VKRTSSTEPTLLLIDIAGCDMEEKKDEEDS 498
YR I+ + SK Y K A H SG + P L+ + G + E+ S
Sbjct: 738 ENYRSTAGIIEFVSKHFYIGKGNAIHASGNIPPHPEIYP-LMFCHVPG--VAERDMSMIS 794
Query: 499 TMNEGEAEVAMAHAKRLIQSGVH---ASD---IGIITPYAAQVVLLKI-LRSKDDKLKNM 551
N E + + + Q H A D I +++ + QV ++ LR K +L +
Sbjct: 795 WHNASEITQVVEKVEEIYQRWPHEWGAQDQKRICVVS-HGVQVSAIRQELRKK--QLPEV 851
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVA 592
V + GRE IIIS V ++ V + N A
Sbjct: 852 VVENYENLPGREFRVIIISTVHTSESLRVSASHNHEFFNEA 892
Score = 137 (53.3 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 68/251 (27%), Positives = 108/251 (43%)
Query: 394 SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDE-----VTSMLTVQ--YRMH 446
+R +LAGDH+Q+ P + V A+ + TL RL Y E + S + YR
Sbjct: 685 TRIVLAGDHMQITPKLFCV-ADGQSAYHTLLNRLFQFYQKEKHEVAMKSRIIFNENYRST 743
Query: 447 EHIMNWSSKQLYNSKIKA-HPSG-VKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGE 504
I+ + SK Y K A H SG + P L+ + G + E+ S N E
Sbjct: 744 AGIIEFVSKHFYIGKGNAIHASGNIPPHPEIYP-LMFCHVPG--VAERDMSMISWHNASE 800
Query: 505 AEVAMAHAKRLIQSGVH---ASD---IGIITPYAAQVVLLKI-LRSKDDKLKNMEVSTVD 557
+ + + Q H A D I +++ + QV ++ LR K +L + V +
Sbjct: 801 ITQVVEKVEEIYQRWPHEWGAQDQKRICVVS-HGVQVSAIRQELRKK--QLPEVVVENYE 857
Query: 558 GFQGREKEAIIISMVRSNSKKEVG------FLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
GRE IIIS V ++ V F ++ R +N +TRA+ Q +V D + S
Sbjct: 858 NLPGREFRVIIISTVHTSESLRVSASHNHEFFNEARVLNTIMTRAQSQVIVVGDAVALCS 917
Query: 612 DGFLKRLIEYF 622
G ++ + F
Sbjct: 918 HGQCSKVWKRF 928
Score = 38 (18.4 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 273 PARLLPQVLESALDAQVLRGDNSSLASDIRKEM-KAL 308
P L+P V + VL GD+ L + + K+L
Sbjct: 2284 PETLIPLVSHKHAEKVVLLGDHKQLKPVVNNDFCKSL 2320
Score = 37 (18.1 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 86 AHKFGTHDVVVLKPNKADLGS 106
A++ HDV++ + A GS
Sbjct: 2244 AYELACHDVILCTCSSASAGS 2264
>TAIR|locus:2064158 [details] [associations]
symbol:EMB2765 "EMBRYO DEFECTIVE 2765" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0005886 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112 HOGENOM:HOG000170551
KO:K12874 OMA:RTKAVGH GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:AY099864 IPI:IPI00544394 RefSeq:NP_850297.1 UniGene:At.23967
ProteinModelPortal:Q8L5Y4 SMR:Q8L5Y4 STRING:Q8L5Y4 PaxDb:Q8L5Y4
PRIDE:Q8L5Y4 EnsemblPlants:AT2G38770.1 GeneID:818459
KEGG:ath:AT2G38770 TAIR:At2g38770 InParanoid:Q8L5Y4
PhylomeDB:Q8L5Y4 ProtClustDB:CLSN2680117 Genevestigator:Q8L5Y4
Uniprot:Q8L5Y4
Length = 1509
Score = 224 (83.9 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 99/332 (29%), Positives = 161/332 (48%)
Query: 303 KEMKALNGKLLKTKDKNTRREIQKELRT--LSKEERKRQQLAVTDVIKNADVVLTTLTGA 360
K+M+A G K +E++ E R L K R +T K A +V T T A
Sbjct: 1050 KDMRAAKGCFSHLK--TVFQELE-ECRAFELLKSTADRANYLMT---KQAKIVAMTCTHA 1103
Query: 361 VSRKLD----NTSFDLVIIDEAAQALEIACWIALL-----KG----SRCILAGDHLQLPP 407
++ D +D ++++E+AQ LEI +I +L G RCIL GDH QLPP
Sbjct: 1104 ALKRRDFLQLGFKYDNLLMEESAQILEIETFIPMLLQRQEDGHARLKRCILIGDHHQLPP 1163
Query: 408 TVQSVEAEKKG-LGRTLFERLADLYGDEVTSMLTVQYRMHEHIM---NWSSKQLYN-SKI 462
V+++ +K + ++LF R L G L Q R + NW + L + S +
Sbjct: 1164 VVKNMAFQKYSHMDQSLFTRFVRL-GIPYIE-LNAQGRARPSLAKLYNWRYRDLGDLSIV 1221
Query: 463 KAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDST---MNEGEAE--VAMAHAKRLIQ 517
K P + + L+++ D E + + S N+GEAE V++ RL+
Sbjct: 1222 KEAPIFQRANAGFSYEYQLVNVP--DYEGRGESTPSPWFYQNQGEAEYIVSVYIYMRLL- 1278
Query: 518 SGVHASDIGIITPYAAQVVLLK-ILRSKDDKLKNM----EVSTVDGFQGREKEAIIISMV 572
G A+ I I+T Y Q +L++ ++ + + +V+TVD FQG++ + I++S+V
Sbjct: 1279 -GYPANKISILTTYNGQKLLIRDVINRRCVPYPFIGPPSKVTTVDKFQGQQNDFILLSLV 1337
Query: 573 RSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
R+ + VG L D RR+ VA++RAR + C
Sbjct: 1338 RT---RFVGHLRDVRRLVVAMSRARLGLYVFC 1366
>UNIPROTKB|Q0V8H6 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9913 "Bos
taurus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 EMBL:BT026242 EMBL:BC148151
IPI:IPI00691419 RefSeq:NP_001069307.1 UniGene:Bt.2939
ProteinModelPortal:Q0V8H6 STRING:Q0V8H6 Ensembl:ENSBTAT00000018997
GeneID:523206 KEGG:bta:523206 CTD:4343 InParanoid:Q0V8H6
OMA:VRFFKLD NextBio:20873687 Uniprot:Q0V8H6
Length = 1003
Score = 155 (59.6 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 47/160 (29%), Positives = 83/160 (51%)
Query: 490 EEKKDEEDSTMNEGEAEVAMAHAKRLI----QSG---VHASDIGIITPYAAQVVLLKILR 542
+E++ S N EA ++ K+L+ + G + +G+I+PY QV ++
Sbjct: 785 DEREGNSPSFFNPEEAATVTSYLKQLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCI 844
Query: 543 SKDDK-------LKNMEVSTVDGFQGREKEAIIISMVRSNSKK-------EVGFLSDRRR 588
+K DK +K+++V +V+ FQG+E+ I+IS VRS+ +GFL + +R
Sbjct: 845 TKLDKQLRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKR 904
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEY 628
NVAVTRA+ +V + + D K +E+ +E+ Y
Sbjct: 905 FNVAVTRAKALLIVVGNPLLLGHDPDWKVFLEFCKENGGY 944
Score = 110 (43.8 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 43/143 (30%), Positives = 67/143 (46%)
Query: 352 VVLTTLTGA---VSRKLDNTSFDLVIIDEAAQALEIACWIAL-----LK-----GSRCIL 398
V++TTL A VS + F + IDEA A+E +A+ +K G + +L
Sbjct: 618 VLITTLITASRLVSAQFPIDHFTHIFIDEAGHAMEPESLVAIAGLMEVKEADNPGGQLVL 677
Query: 399 AGDHLQLPPTVQSVEAEKKGLGRTLFERLA----------DLYGDEVTSMLTVQYRMHEH 448
AGD QL P ++ +K GLG +L ERL D Y + + L YR H
Sbjct: 678 AGDPRQLGPVLRCPLTQKHGLGYSLLERLLTFNALYKKGPDGYNPQFITKLLRNYRSHPT 737
Query: 449 IMNWSSKQLYNSKIKAHPSGVKR 471
I++ ++ Y+ +++A V R
Sbjct: 738 ILDVPNRLYYDGELQACADVVDR 760
Score = 53 (23.7 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 25/93 (26%), Positives = 40/93 (43%)
Query: 171 LIPVLF--GEQKPTVLKKDIAFKPFNSNLDHS--QKDAISKALSSKN---VFMLHXXXXX 223
L P+LF + +L D+ K ++ +L+ + Q A+ + +++
Sbjct: 469 LEPMLFPVASRGVPLLPSDVKLKLYDRSLESNPEQLQAMKHIVMGTTRPAPYIIFGPPGT 528
Query: 224 XXXXXVVEIILQEVKRGSK--ILACAASNIAVD 254
+VE I Q VK K ILACA SN D
Sbjct: 529 GKTVTLVEAIKQVVKHLPKAHILACAPSNSGAD 561
Score = 38 (18.4 bits), Expect = 6.5e-13, Sum P(3) = 6.5e-13
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 178 EQKPTVLKKDIAFKPFNSNLDH 199
E +P+VL+ D F +S H
Sbjct: 386 ESRPSVLRGDHLFALLSSETHH 407
>WB|WBGene00014208 [details] [associations]
symbol:ZK1067.2 species:6239 "Caenorhabditis elegans"
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] GeneTree:ENSGT00700000104467
EMBL:Z70038 RefSeq:NP_001254204.1 EnsemblMetazoa:ZK1067.2b
GeneID:174463 KEGG:cel:CELE_ZK1067.2 CTD:174463 WormBase:ZK1067.2b
OMA:THIGVQI Uniprot:E9P860
Length = 2443
Score = 224 (83.9 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 85/294 (28%), Positives = 143/294 (48%)
Query: 318 KNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRK--LDNTSFDLVII 375
+N R+I +E R + + Q ++++ ++ T TG + L+ ++I+
Sbjct: 1408 ENLPRQI-REYREACENFKNAQNRVDAEIMRMTMIIGATTTGCSRLRPTLEKVGPRILIV 1466
Query: 376 DEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVE-AEKKGLGRTLFERLADLYGD 433
+EAA+ LE A++ ++ GDH QL P E GL ++FERL + G
Sbjct: 1467 EEAAEVLEAHIISAMISTVEHVVMIGDHKQLRPNPAVHELGVAYGLRISMFERLVER-GL 1525
Query: 434 EVTSMLTVQYRMHEHIMNWSSK-QLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEK 492
S L Q+RM+ I + K Y++ A G+ T L + MEE
Sbjct: 1526 PF-SQLRQQHRMNLTISDKIVKLSFYDNVTDAENVGLYPDVQGMATNLFF-WSHTSMEES 1583
Query: 493 KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL-----KILRSKDDK 547
DE S +N+ E + +A K L++ +DI ++ Y+AQ L+ + S D
Sbjct: 1584 PDEV-SWLNKHEISMTVALVKHLLKQNYTTNDIVVLATYSAQKNLMYREYANVFGSTPDS 1642
Query: 548 LKNMEVSTVDGFQGREKEAIIISMVRSN-SKKE---VGFLSDRRRMNVAVTRAR 597
+ V TVD FQG+E++ +I+S+VRS+ +E +GFL+ R+ VA+TRA+
Sbjct: 1643 -NVIPVETVDSFQGKERKIVIVSLVRSHRGGRENTGIGFLAVANRICVALTRAQ 1695
>UNIPROTKB|Q9HCE1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006355 GO:GO:0007219 GO:GO:0006351
GO:GO:0003723 GO:GO:0004386 GO:GO:0000932 GO:GO:0035279
eggNOG:COG1112 InterPro:IPR026122 PANTHER:PTHR10887:SF17
EMBL:AL603832 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 CTD:4343
OMA:VRFFKLD EMBL:AB046851 EMBL:AK074174 EMBL:AL833353 EMBL:BC002548
EMBL:BC004499 EMBL:BC009312 IPI:IPI00444452 IPI:IPI00444454
IPI:IPI00929442 RefSeq:NP_001123551.1 RefSeq:NP_066014.1
UniGene:Hs.514941 ProteinModelPortal:Q9HCE1 SMR:Q9HCE1
DIP:DIP-44158N IntAct:Q9HCE1 STRING:Q9HCE1 PhosphoSite:Q9HCE1
DMDM:24638063 PaxDb:Q9HCE1 PRIDE:Q9HCE1 DNASU:4343
Ensembl:ENST00000357443 Ensembl:ENST00000369645
Ensembl:ENST00000413052 Ensembl:ENST00000544796 GeneID:4343
KEGG:hsa:4343 UCSC:uc001eck.3 GeneCards:GC01P113215 HGNC:HGNC:7200
MIM:610742 neXtProt:NX_Q9HCE1 PharmGKB:PA30908 HOVERGEN:HBG052500
InParanoid:Q9HCE1 PhylomeDB:Q9HCE1 ChiTaRS:MOV10 GenomeRNAi:4343
NextBio:17098 ArrayExpress:Q9HCE1 Bgee:Q9HCE1 CleanEx:HS_MOV10
Genevestigator:Q9HCE1 GermOnline:ENSG00000155363 Uniprot:Q9HCE1
Length = 1003
Score = 153 (58.9 bits), Expect = 4.0e-14, Sum P(3) = 4.0e-14
Identities = 49/161 (30%), Positives = 83/161 (51%)
Query: 490 EEKKDEEDSTMNEGEAEVAMAHAKRLI----QSG---VHASDIGIITPYAAQV-----VL 537
+E++ S N EA ++ K L+ + G + +G+I+PY QV +
Sbjct: 785 DEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCI 844
Query: 538 LKI---LRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK-------EVGFLSDRR 587
K+ LR DD +K+++V +V+ FQG+E+ I+IS VRS+ +GFL + +
Sbjct: 845 TKLDRELRGLDD-IKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPK 903
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEY 628
R NVAVTRA+ +V + + D K +E+ +E+ Y
Sbjct: 904 RFNVAVTRAKALLIIVGNPLLLGHDPDWKVFLEFCKENGGY 944
Score = 108 (43.1 bits), Expect = 4.0e-14, Sum P(3) = 4.0e-14
Identities = 43/143 (30%), Positives = 66/143 (46%)
Query: 352 VVLTTLTGA---VSRKLDNTSFDLVIIDEAAQALEIACWIAL-----LK-----GSRCIL 398
V++TTL A VS + F + IDEA +E +A+ +K G + +L
Sbjct: 618 VLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMEVKETGDPGGQLVL 677
Query: 399 AGDHLQLPPTVQSVEAEKKGLGRTLFERLA----------DLYGDEVTSMLTVQYRMHEH 448
AGD QL P ++S +K GLG +L ERL D Y + + L YR H
Sbjct: 678 AGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQFITKLLRNYRSHPT 737
Query: 449 IMNWSSKQLYNSKIKAHPSGVKR 471
I++ ++ Y +++A V R
Sbjct: 738 ILDIPNQLYYEGELQACADVVDR 760
Score = 54 (24.1 bits), Expect = 4.0e-14, Sum P(3) = 4.0e-14
Identities = 25/93 (26%), Positives = 41/93 (44%)
Query: 171 LIPVLF--GEQKPTVLKKDIAFKPFNSNLDHS--QKDAISKALSSKN---VFMLHXXXXX 223
L P+LF + +L D+ K ++ +L+ + Q A+ ++ +++
Sbjct: 469 LWPMLFPVAPRDVPLLPSDVKLKLYDRSLESNPEQLQAMRHIVTGTTRPAPYIIFGPPGT 528
Query: 224 XXXXXVVEIILQEVKRGSK--ILACAASNIAVD 254
+VE I Q VK K ILACA SN D
Sbjct: 529 GKTVTLVEAIKQVVKHLPKAHILACAPSNSGAD 561
>UNIPROTKB|E2RBM4 [details] [associations]
symbol:PRIC285 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AAEX03014158 Ensembl:ENSCAFT00000020582 OMA:RCQYAHS
Uniprot:E2RBM4
Length = 2919
Score = 218 (81.8 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 86/318 (27%), Positives = 142/318 (44%)
Query: 279 QVLESALDAQVLRGDNSSLASDIRK-EMKALNGKLLKTKDKNTRREIQKELRTLSKEERK 337
Q L S +R ++ A DIR + + G++L +D + + I + R ++ +
Sbjct: 2546 QTLRSITLHHRVRQSSNPYAPDIRDFDARLQKGEILSKEDLSWYKTILGKARKFELDQHR 2605
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL---KGS 394
V+L T + A S L ++IDEA A E I L+ K
Sbjct: 2606 --------------VILCTCSCAASASLRKLDVRQILIDEAGMATEPETLIPLVAFSKAE 2651
Query: 395 RCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSS 454
+ +L GDH QL P V++ + + GL R+LFER + D ML QYRMHE I + S
Sbjct: 2652 KVVLLGDHKQLRPVVKNEQLQNLGLDRSLFERY---HVD--AHMLDTQYRMHEGICAFPS 2706
Query: 455 KQLYNSKIKAHPSGVKRTSST-------EPTLLLIDIAGCDME--EKKDE--EDSTMNEG 503
+ Y K+K G++R S +++ + G + DE E+S N
Sbjct: 2707 MEFYEKKLKTW-QGLRRPPSILGHIGKESCSVIFGHVQGHEQSLLVSTDEGNENSKANPE 2765
Query: 504 EAEVAMAHAKRL-IQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGR 562
E + AK+L + V D+ I+TPY AQ + R + + + V ++ QG
Sbjct: 2766 EVAAVVRIAKQLTLGRTVEPKDVAILTPYNAQAAEIS-KRLVREGVSGVTVCSITKSQGS 2824
Query: 563 EKEAIIISMVRSNSKKEV 580
E +++S VR+ + ++
Sbjct: 2825 EWRYVLVSTVRTCQESDL 2842
Score = 156 (60.0 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 70/251 (27%), Positives = 108/251 (43%)
Query: 393 GSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY---GDEVT--SMLTVQ--YRM 445
G+R +LAGDH+Q+ P + SV + G TL RL Y EV S L YR
Sbjct: 934 GTRVVLAGDHMQVTPRLFSVP-RAQAAGHTLLYRLFQHYQREAHEVAQRSRLIFHQNYRS 992
Query: 446 HEHIMNWSSKQLYNSK-IKAHPSG-VKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEG 503
E I+++ S+ Y +K H SG V P L+ +AG E+ S +N
Sbjct: 993 TEAILSFVSRHFYVAKGSPIHASGRVPPHPRLHP-LMFCHVAG--NPERDLSSTSWLNAA 1049
Query: 504 EAEVAMAHAKRLIQS-----GVHASDIGIITPYAAQVVLLKI-LRSKDDKLKNMEVSTVD 557
E + + L G + + AQV L+ LR ++ L + V + +
Sbjct: 1050 EVAQVVEQVRDLHDGWPSCWGAREQKHICVVSHGAQVTALRQELRKRN--LGQVSVGSFE 1107
Query: 558 GFQGREKEAIIISMVR------SNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
GRE +++S V S+ +GF +D R +N +TRA+ Q V + + S
Sbjct: 1108 ILPGREFRVVVLSTVHNHHSLLSSGTASLGFFTDARVLNTIMTRAQSQVVAVGNALALCS 1167
Query: 612 DGFLKRLIEYF 622
G +L + F
Sbjct: 1168 SGACSKLWKSF 1178
Score = 153 (58.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 69/242 (28%), Positives = 106/242 (43%)
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIAL---LKGSRCILAGDHLQLPPT 408
+V+TT + A ++ F ++IDEAAQ LE L G+R +LAGDH+Q+ P
Sbjct: 890 IVVTTTSQARELRVPAGFFSHILIDEAAQMLECEALTPLRYAAPGTRVVLAGDHMQVTPR 949
Query: 409 VQSVEAEKKGLGRTLFERLADLY---GDEVT--SMLTVQ--YRMHEHIMNWSSKQLYNSK 461
+ SV + G TL RL Y EV S L YR E I+++ S+ Y +K
Sbjct: 950 LFSVP-RAQAAGHTLLYRLFQHYQREAHEVAQRSRLIFHQNYRSTEAILSFVSRHFYVAK 1008
Query: 462 -IKAHPSG-VKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQS- 518
H SG V P L+ +AG E+ S +N E + + L
Sbjct: 1009 GSPIHASGRVPPHPRLHP-LMFCHVAG--NPERDLSSTSWLNAAEVAQVVEQVRDLHDGW 1065
Query: 519 ----GVHASDIGIITPYAAQVVLLKI-LRSKDDKLKNMEVSTVDGFQGREKEAIIISMVR 573
G + + AQV L+ LR ++ L + V + + GRE +++S V
Sbjct: 1066 PSCWGAREQKHICVVSHGAQVTALRQELRKRN--LGQVSVGSFEILPGREFRVVVLSTVH 1123
Query: 574 SN 575
++
Sbjct: 1124 NH 1125
>UNIPROTKB|F5GX64 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:9606
"Homo sapiens" [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IEA] InterPro:IPR026853 GO:GO:0043141
EMBL:AP000808 HGNC:HGNC:5542 PANTHER:PTHR10887:SF23 IPI:IPI01011724
ProteinModelPortal:F5GX64 Ensembl:ENST00000539224
ArrayExpress:F5GX64 Bgee:F5GX64 Uniprot:F5GX64
Length = 192
Score = 186 (70.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 50/150 (33%), Positives = 88/150 (58%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK-GDV--LPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + G LP++ F + D+V L + A+ GS L G++ R+ S+TVAFD
Sbjct: 62 RLLVTFEPRRYGSAAALPSNSFTSGDIVGLY-DAANEGSQ-LATGILTRVTQKSVTVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMK 153
+ + L+ + RL KLAN+VTYRR+K
Sbjct: 120 ESHDFQLSLDRENSYRLLKLANDVTYRRLK 149
>UNIPROTKB|J9P7Z9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:AAEX03011080 EMBL:AAEX03011081
Ensembl:ENSCAFT00000044224 Uniprot:J9P7Z9
Length = 983
Score = 152 (58.6 bits), Expect = 2.0e-13, Sum P(4) = 2.0e-13
Identities = 49/161 (30%), Positives = 82/161 (50%)
Query: 490 EEKKDEEDSTMNEGEAEVAMAHAKRLI----QSG---VHASDIGIITPYAAQVVLL---- 538
+E++ S N EA ++ K L+ + G + +G+I+PY QV +
Sbjct: 765 DEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRHCI 824
Query: 539 ----KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK-------EVGFLSDRR 587
K LR DD +K+++V +V+ FQG+E+ I+IS VRS+ +GFL + +
Sbjct: 825 TKLDKELRGLDD-IKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPK 883
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEY 628
R NVAVTRA+ +V + + D K +E+ +E+ Y
Sbjct: 884 RFNVAVTRAKALLIVVGNPLLLGHDPDWKVFLEFCKENGGY 924
Score = 107 (42.7 bits), Expect = 2.0e-13, Sum P(4) = 2.0e-13
Identities = 42/143 (29%), Positives = 68/143 (47%)
Query: 352 VVLTTLTGA---VSRKLDNTSFDLVIIDEAAQALEIACWIAL-----LK-----GSRCIL 398
V++TTL A VS + F + IDEA ++E +A+ +K G + +L
Sbjct: 598 VLITTLITASRLVSAQFPIDHFTHIFIDEAGHSMEPESLVAIAGLMEVKETDNPGGQLVL 657
Query: 399 AGDHLQLPPTVQSVEAEKKGLGRTLFERL----------ADLYGDEVTSMLTVQYRMHEH 448
AGD QL P ++S +K GLG +L ERL ++ Y + + L YR H
Sbjct: 658 AGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNALYKKGSNGYNPQFITKLLRNYRSHPT 717
Query: 449 IMNWSSKQLYNSKIKAHPSGVKR 471
I++ ++ Y +++A V R
Sbjct: 718 ILDIPNQLYYEGELQACADVVDR 740
Score = 53 (23.7 bits), Expect = 2.0e-13, Sum P(4) = 2.0e-13
Identities = 25/93 (26%), Positives = 40/93 (43%)
Query: 171 LIPVLF--GEQKPTVLKKDIAFKPFNSNLDHS--QKDAISKALSSKN---VFMLHXXXXX 223
L P+LF + +L D+ K ++ +L+ + Q A+ + +++
Sbjct: 449 LWPMLFPVASRGVPLLPSDVKLKLYDRSLESNPEQLQAMKYIIMGTTRPAPYIIFGPPGT 508
Query: 224 XXXXXVVEIILQEVKRGSK--ILACAASNIAVD 254
+VE I Q VK K ILACA SN D
Sbjct: 509 GKTVTLVEAIKQVVKHLPKAHILACAPSNSGAD 541
Score = 37 (18.1 bits), Expect = 2.0e-13, Sum P(4) = 2.0e-13
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 107 PALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYR 150
P L Q + L+D+SI A +I E L+ + EV +R
Sbjct: 278 PRLRQLLPILLQDTSIFTAPKEIAEIKAQLETALQWRSYEVKFR 321
>UNIPROTKB|F1P7T4 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:AAEX03011080 EMBL:AAEX03011081 RefSeq:XP_540337.3
Ensembl:ENSCAFT00000021339 GeneID:483219 KEGG:cfa:483219
Uniprot:F1P7T4
Length = 1003
Score = 152 (58.6 bits), Expect = 2.2e-13, Sum P(4) = 2.2e-13
Identities = 49/161 (30%), Positives = 82/161 (50%)
Query: 490 EEKKDEEDSTMNEGEAEVAMAHAKRLI----QSG---VHASDIGIITPYAAQVVLL---- 538
+E++ S N EA ++ K L+ + G + +G+I+PY QV +
Sbjct: 785 DEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRHCI 844
Query: 539 ----KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK-------EVGFLSDRR 587
K LR DD +K+++V +V+ FQG+E+ I+IS VRS+ +GFL + +
Sbjct: 845 TKLDKELRGLDD-IKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPK 903
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEY 628
R NVAVTRA+ +V + + D K +E+ +E+ Y
Sbjct: 904 RFNVAVTRAKALLIVVGNPLLLGHDPDWKVFLEFCKENGGY 944
Score = 107 (42.7 bits), Expect = 2.2e-13, Sum P(4) = 2.2e-13
Identities = 42/143 (29%), Positives = 68/143 (47%)
Query: 352 VVLTTLTGA---VSRKLDNTSFDLVIIDEAAQALEIACWIAL-----LK-----GSRCIL 398
V++TTL A VS + F + IDEA ++E +A+ +K G + +L
Sbjct: 618 VLITTLITASRLVSAQFPIDHFTHIFIDEAGHSMEPESLVAIAGLMEVKETDNPGGQLVL 677
Query: 399 AGDHLQLPPTVQSVEAEKKGLGRTLFERL----------ADLYGDEVTSMLTVQYRMHEH 448
AGD QL P ++S +K GLG +L ERL ++ Y + + L YR H
Sbjct: 678 AGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNALYKKGSNGYNPQFITKLLRNYRSHPT 737
Query: 449 IMNWSSKQLYNSKIKAHPSGVKR 471
I++ ++ Y +++A V R
Sbjct: 738 ILDIPNQLYYEGELQACADVVDR 760
Score = 53 (23.7 bits), Expect = 2.2e-13, Sum P(4) = 2.2e-13
Identities = 25/93 (26%), Positives = 40/93 (43%)
Query: 171 LIPVLF--GEQKPTVLKKDIAFKPFNSNLDHS--QKDAISKALSSKN---VFMLHXXXXX 223
L P+LF + +L D+ K ++ +L+ + Q A+ + +++
Sbjct: 469 LWPMLFPVASRGVPLLPSDVKLKLYDRSLESNPEQLQAMKYIIMGTTRPAPYIIFGPPGT 528
Query: 224 XXXXXVVEIILQEVKRGSK--ILACAASNIAVD 254
+VE I Q VK K ILACA SN D
Sbjct: 529 GKTVTLVEAIKQVVKHLPKAHILACAPSNSGAD 561
Score = 37 (18.1 bits), Expect = 2.2e-13, Sum P(4) = 2.2e-13
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 107 PALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYR 150
P L Q + L+D+SI A +I E L+ + EV +R
Sbjct: 298 PRLRQLLPILLQDTSIFTAPKEIAEIKAQLETALQWRSYEVKFR 341
>UNIPROTKB|Q9BXT6 [details] [associations]
symbol:MOV10L1 "Putative helicase Mov10l1" species:9606
"Homo sapiens" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0007283 "spermatogenesis" evidence=IEP]
[GO:0005524 "ATP binding" evidence=TAS] [GO:0000287 "magnesium ion
binding" evidence=TAS] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0007281 "germ cell development" evidence=IEP] [GO:0005622
"intracellular" evidence=IC] GO:GO:0007275 GO:GO:0005524
GO:GO:0000287 GO:GO:0007283 GO:GO:0003723 GO:GO:0005622
GO:GO:0007281 eggNOG:COG1112 GO:GO:0004004 EMBL:AL022328
EMBL:AF285604 EMBL:AK000033 EMBL:AK090740 EMBL:CR456466
EMBL:AL034546 EMBL:BC150137 EMBL:BC152539 EMBL:AL133068
IPI:IPI00005638 IPI:IPI00178391 IPI:IPI00215671 IPI:IPI00853536
PIR:T42668 RefSeq:NP_001157576.1 RefSeq:NP_001157577.1
RefSeq:NP_001157578.1 RefSeq:NP_061868.1 UniGene:Hs.62880
ProteinModelPortal:Q9BXT6 SMR:Q9BXT6 STRING:Q9BXT6
PhosphoSite:Q9BXT6 DMDM:22095856 PaxDb:Q9BXT6 PeptideAtlas:Q9BXT6
PRIDE:Q9BXT6 DNASU:54456 Ensembl:ENST00000262794
Ensembl:ENST00000354853 Ensembl:ENST00000395843
Ensembl:ENST00000395852 Ensembl:ENST00000395858
Ensembl:ENST00000545383 GeneID:54456 KEGG:hsa:54456 UCSC:uc003bjj.3
UCSC:uc003bjl.3 UCSC:uc003bjm.1 CTD:54456 GeneCards:GC22P050528
HGNC:HGNC:7201 HPA:HPA019034 MIM:605794 neXtProt:NX_Q9BXT6
PharmGKB:PA30909 HOVERGEN:HBG052382 InParanoid:Q9BXT6 KO:K13983
OMA:NMSGVTL OrthoDB:EOG49GKFV PhylomeDB:Q9BXT6 GenomeRNAi:54456
NextBio:56697 ArrayExpress:Q9BXT6 Bgee:Q9BXT6 CleanEx:HS_MOV10L1
Genevestigator:Q9BXT6 GermOnline:ENSG00000073146 InterPro:IPR026125
PANTHER:PTHR10887:SF6 Uniprot:Q9BXT6
Length = 1211
Score = 204 (76.9 bits), Expect = 3.9e-13, Sum P(3) = 3.9e-13
Identities = 69/212 (32%), Positives = 106/212 (50%)
Query: 435 VTSMLTVQYRMHEHIMNWSSKQLYNSKIK--AHPSGVKRTSSTE--PT----LLLIDIAG 486
+ + L YR HE ++ S+ Y+ +++ A P+ V E P L+ + G
Sbjct: 964 LVTKLVKNYRSHEALLMLPSRLFYHRELEVCADPTVVTSLLGWEKLPKKGFPLIFHGVRG 1023
Query: 487 CDMEEKKDEEDSTMNEGEAEVAMAHAKRL---IQSGVHASDIGIITPYAAQVVLLKILRS 543
+ E K S N EA + + L I S V ASDIG+ITPY QV ++IL
Sbjct: 1024 SEAREGKSP--SWFNPAEAVQVLRYCCLLAHSISSQVSASDIGVITPYRKQVEKIRILLR 1081
Query: 544 KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK-E-----VGFLSDRRRMNVAVTRAR 597
D L +++V +V+ FQG+E IIIS VRSN + E +GFLS+ +R NVA+TR +
Sbjct: 1082 NVD-LMDIKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPK 1140
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEHAEYL 629
++ + + D L+EY + Y+
Sbjct: 1141 ALLIVLGNPHVLVRDPCFGALLEYSITNGVYM 1172
Score = 63 (27.2 bits), Expect = 3.9e-13, Sum P(3) = 3.9e-13
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 193 FNSNLDHSQKDAISKALSSKN---VFMLHXXXXXXXXXXVVEIILQE--VKRGSKILACA 247
FN L+ +QK A+ + LS ++L ++E +LQ S+IL CA
Sbjct: 741 FNPVLNENQKLAVKRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHFALPDSRILVCA 800
Query: 248 ASNIAVD 254
SN A D
Sbjct: 801 PSNSAAD 807
Score = 53 (23.7 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 21/107 (19%), Positives = 45/107 (42%)
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCI 397
++ +AV + K ++ + AVS K ++ S + + + I C +L++G+ CI
Sbjct: 75 QEVIAVVEENKVSNGLKAIRVEAVSDKWEDDSRNHGSPSDCGPRVLIGCVTSLVEGAGCI 134
Query: 398 LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
+ L + E K + + E TS+ ++Y+
Sbjct: 135 SQTTYFSLESVCEGFEPCKGDWVEAEYRIRPGTWSSEATSVKPLRYK 181
Score = 38 (18.4 bits), Expect = 3.9e-13, Sum P(3) = 3.9e-13
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 30 KEAEISASITSGASRNLDTAQKKGS 54
K+ + S ++TS + + TAQK+ S
Sbjct: 463 KKLKSSQALTSAKTTVVVTAQKRNS 487
>FB|FBgn0036451 [details] [associations]
symbol:CG9425 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR003593
InterPro:IPR007087 InterPro:IPR011990 InterPro:IPR015880
Pfam:PF00642 PROSITE:PS00028 SMART:SM00355 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0017111 eggNOG:COG1112
GeneTree:ENSGT00550000074391 RefSeq:NP_996084.1 UniGene:Dm.11708
ProteinModelPortal:Q7KUL0 SMR:Q7KUL0 STRING:Q7KUL0 PaxDb:Q7KUL0
PRIDE:Q7KUL0 EnsemblMetazoa:FBtr0075693 EnsemblMetazoa:FBtr0333074
EnsemblMetazoa:FBtr0333075 GeneID:39613 KEGG:dme:Dmel_CG9425
UCSC:CG9425-RB FlyBase:FBgn0036451 InParanoid:Q7KUL0 OMA:WINELSG
OrthoDB:EOG46HDRH PhylomeDB:Q7KUL0 ChiTaRS:CG9425 GenomeRNAi:39613
NextBio:814517 ArrayExpress:Q7KUL0 Bgee:Q7KUL0 Uniprot:Q7KUL0
Length = 2103
Score = 202 (76.2 bits), Expect = 6.8e-13, Sum P(3) = 6.8e-13
Identities = 73/246 (29%), Positives = 122/246 (49%)
Query: 343 VTDVIKNADVVLTTLTGA--VSRKLDNTSFDLVIIDEAAQALEIACW--IALLKGS-RCI 397
V D++++ VV+T + L F + +DEAAQA+E +AL S R +
Sbjct: 922 VEDIMRHRIVVVTLSISMELATLGLPKGLFTHIFLDEAAQAMECEAIMPLALANDSTRIV 981
Query: 398 LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS--MLTVQYRMHEHIMNWSSK 455
LAGDH+Q+ P + S A+++ L +L ERL D Y +L YR HE I+ ++S+
Sbjct: 982 LAGDHMQMSPELFSAFAKERKLHISLLERLYDHYPSNFPCKILLCENYRAHEAIIRFTSE 1041
Query: 456 QLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEA-EVA--MAHA 512
Y K+ A SG + L G D+++K + N E EV ++
Sbjct: 1042 LFYEQKLVA--SGKQPRHDRFYPLTFFTTRGEDVQDKNST--AFYNNAEVYEVVERVSEL 1097
Query: 513 KRLIQSG---VHASDIGIITPYAAQVVLLKI-LRSKDDKLKNMEVSTVDGFQGREKEAII 568
++ S ++ + IGI+TPY+ QV ++ LR + ++ + V V QG++ A+
Sbjct: 1098 RKRWPSAWGKLNDTSIGIMTPYSDQVFRIRSELRKR--RMGGISVERVLNVQGKQFRAVF 1155
Query: 569 ISMVRS 574
+S VR+
Sbjct: 1156 LSTVRT 1161
Score = 69 (29.3 bits), Expect = 6.8e-13, Sum P(3) = 6.8e-13
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 579 EVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLK----RLIEYFEEHAEYLSGSEY 634
+ GFLS+ + +N A+TRA+ +V D + S G + R IE +EH L G +
Sbjct: 1186 DYGFLSNSKLLNTAITRAQSLVAVVGDPVALCSIGRCRKVWERFIEICDEHKS-LFGLTW 1244
Query: 635 LN 636
N
Sbjct: 1245 SN 1246
Score = 40 (19.1 bits), Expect = 6.8e-13, Sum P(3) = 6.8e-13
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 203 DAISKALSSK-NVFMLHXXXXXXXXXXVVEIILQEVKRG-SKILACAASNIAVD 254
+AI+ ALS K +L + + I Q + + +KIL C SN A D
Sbjct: 815 NAITTALSIKLPPILLIGPFGTGKTYTLAQAIKQLLTQPEAKILICTHSNSAAD 868
>UNIPROTKB|E1BZJ8 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007281 "germ cell development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AADN02050039 EMBL:AADN02050037
EMBL:AADN02050038 IPI:IPI00585215 Ensembl:ENSGALT00000013959
ArrayExpress:E1BZJ8 Uniprot:E1BZJ8
Length = 1192
Score = 184 (69.8 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 66/209 (31%), Positives = 104/209 (49%)
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK--AHPSGVKRTSSTE--PT----LLLI 482
Y + + L YR H ++ SK Y+ +++ A S V E P L+
Sbjct: 967 YNPLLITKLVNNYRSHSALLALPSKLFYHKELEVCADTSVVSSLLHWEKLPRKGFPLIFH 1026
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQS---GVHASDIGIITPYAAQVVLLK 539
+ G E ++ S N EA M + L ++ V +DIG+ITPY QV +K
Sbjct: 1027 GVRG--KETREGHSPSWFNPTEAVQVMQYCCHLAKNESIAVSVTDIGVITPYRKQVEKIK 1084
Query: 540 -ILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSN----SKKE--VGFLSDRRRMNVA 592
+LRS D L +++V TV+ FQG+E I+S VRS +++E +GFLS+ +R NVA
Sbjct: 1085 FLLRSID--LSDIKVGTVEEFQGQECMVTILSTVRSYEDTFAEEEYCLGFLSNPKRFNVA 1142
Query: 593 VTRARRQCCLVCDTETVSSDGFLKRLIEY 621
+TRA+ ++ + + D L+EY
Sbjct: 1143 ITRAKALLIVIGNPHLLVKDPCFCALLEY 1171
Score = 71 (30.1 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 25/69 (36%), Positives = 32/69 (46%)
Query: 193 FNSNLDHSQKDAISKALSSK---NVFMLHXXXXXXXXXXVVEIILQE--VKRGSKILACA 247
FN L+ QK A+ + LS + ++L VVE ILQ S+IL CA
Sbjct: 748 FNPMLNKQQKLAVKRILSGECRPTPYILFGPPGTGKTITVVEAILQIHFTLPDSRILVCA 807
Query: 248 ASNIAVDNI 256
SN A D I
Sbjct: 808 PSNAATDLI 816
>UNIPROTKB|Q9BYK8 [details] [associations]
symbol:HELZ2 "Helicase with zinc finger domain 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 PROSITE:PS50157
SMART:SM00355 SMART:SM00382 SMART:SM00955 GO:GO:0005524
Reactome:REACT_111045 GO:GO:0005654 GO:GO:0044281 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0044255
GO:GO:0006351 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
GO:GO:0030374 eggNOG:COG0557 InterPro:IPR022966 EMBL:AL121829
EMBL:AF517673 EMBL:AB201715 EMBL:AB051556 EMBL:AK074171
EMBL:AK055611 IPI:IPI00249304 IPI:IPI00249305 IPI:IPI00736631
RefSeq:NP_001032412.2 RefSeq:NP_208384.3 UniGene:Hs.517180
ProteinModelPortal:Q9BYK8 IntAct:Q9BYK8 STRING:Q9BYK8
PhosphoSite:Q9BYK8 DMDM:209572784 PaxDb:Q9BYK8 PRIDE:Q9BYK8
GeneID:85441 KEGG:hsa:85441 UCSC:uc002yfl.1 UCSC:uc002yfm.2
CTD:85441 GeneCards:GC20M062189 HGNC:HGNC:30021 HPA:HPA051267
MIM:611265 neXtProt:NX_Q9BYK8 HOGENOM:HOG000231856
HOVERGEN:HBG080465 InParanoid:Q9BYK8 OMA:FRAAHIM PhylomeDB:Q9BYK8
GenomeRNAi:85441 NextBio:76020 ArrayExpress:Q9BYK8 Bgee:Q9BYK8
Genevestigator:Q9BYK8 GermOnline:ENSG00000130589
PANTHER:PTHR10887:SF16 Uniprot:Q9BYK8
Length = 2649
Score = 222 (83.2 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 76/245 (31%), Positives = 117/245 (47%)
Query: 351 DVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLK---GSRCILAGDHLQLPP 407
+V+L T + A S L +++DEA A E I L++ + +L GDH QL P
Sbjct: 2335 EVILCTCSCAASASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRP 2394
Query: 408 TVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKA--- 464
V++ + GL R+LFER Y ++ ML QYRMHE I + S Y SK+K
Sbjct: 2395 VVKNERLQNLGLDRSLFER----YHEDA-HMLDTQYRMHEGICAFPSVAFYKSKLKTWQG 2449
Query: 465 --HPSGVKRTSSTEPTLLLID-IAGCDME--EKKDE--EDSTMN-EGEAEVAMAHAKRLI 516
P V + E ++ + G + DE E+S N E AEV + +
Sbjct: 2450 LRRPPSVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTL 2509
Query: 517 QSGVHASDIGIITPYAAQVV-LLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSN 575
V DI ++TPY AQ + K LR + + + VS++ QG E +++S VR+
Sbjct: 2510 GRTVEPQDIAVLTPYNAQASEISKALRREG--IAGVAVSSITKSQGSEWRYVLVSTVRTC 2567
Query: 576 SKKEV 580
+K ++
Sbjct: 2568 AKSDL 2572
Score = 171 (65.3 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 84/294 (28%), Positives = 128/294 (43%)
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL---KGSRCILAGDHLQLPPT 408
VV+TT + A ++ F ++IDEAAQ LE L G+R +LAGDH+Q+ P
Sbjct: 643 VVVTTTSQARELRVPVGFFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTPR 702
Query: 409 VQSVEAEKKGLGRTLFERLADLYGDEV-----TSMLTVQ--YRMHEHIMNWSSKQLYNSK 461
+ SV A + TL RL Y E S L YR + I+++ S+ Y +K
Sbjct: 703 LFSV-ARARAAEHTLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFYVAK 761
Query: 462 IKA-HPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGE-AEVA--MAHAKRLIQ 517
H G L+ +AG ++ S +N E A+V + A
Sbjct: 762 GNPIHARGKVPPHPRHYPLMFCHVAGSP--DRDMSMASWLNLAEIAQVVEKVQEAYNTWP 819
Query: 518 S--GVHASDIGIITPYAAQVVLLKI-LRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRS 574
S G + + AQV L+ LR +D L + V + + GR+ +++S V +
Sbjct: 820 SCWGGREQRCICVVSHGAQVSALRQELRRRD--LGQVSVGSFEILPGRQFRVVVLSTVHT 877
Query: 575 -NSKKEVG-----FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
S G F +D R +N +TRA+ Q +V D + S G +L E F
Sbjct: 878 CQSLLSPGALAPEFFTDARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWESF 931
Score = 37 (18.1 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 234 LQEVKRG-SKILACAASNIAVD 254
L+ ++R +K+L C +N A D
Sbjct: 559 LEVIRRPETKVLICTHTNSAAD 580
>ASPGD|ASPL0000064563 [details] [associations]
symbol:AN7014 species:162425 "Emericella nidulans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0005681 EMBL:BN001304
GO:GO:0004386 GO:GO:0000398 HOGENOM:HOG000170551 GO:GO:0097157
PANTHER:PTHR10887:SF5 ProteinModelPortal:C8VC84
EnsemblFungi:CADANIAT00000462 OMA:TIYENEM Uniprot:C8VC84
Length = 1422
Score = 203 (76.5 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 84/271 (30%), Positives = 132/271 (48%)
Query: 352 VVLTTLTGAVSRK-LDNTSF--DLVIIDEAAQALEIACWI--AL-------LKGSRCILA 399
+ +T+ A+ R+ + + F D ++++EAAQ E+ +I AL L R +L
Sbjct: 1039 IAMTSTHAAMRRQEIADLGFHYDNIVMEEAAQITEVESFIPTALQNMKEGQLPLKRIVLC 1098
Query: 400 GDHLQLPPTVQSVEAEKKG-LGRTLFERLADLYGDEVTSMLTVQYRMHEHI---MNWSSK 455
GDHLQ P +Q++ + ++LF RL L +T L Q R I W +
Sbjct: 1099 GDHLQNSPIIQNLAFRQYAHFEQSLFLRLIRLGVPAIT--LDQQGRARPSIAELFRWRYQ 1156
Query: 456 QLYNSKIKAHPSGVKRTSST---EPTLLLI-DIAGCDMEEKKDEEDSTMNEGEAEVAMAH 511
L N I K+ ++ E + + D G E++ N GEAE A+A
Sbjct: 1157 NLGNLPIVEQAPEFKQANAGFQFEYQFINVPDYQGTG--EREPTPHFVQNLGEAEYAVAI 1214
Query: 512 AKRLIQSGVHASDIGIITPYAAQVVLLK-ILRSKDDK--LKNME--VSTVDGFQGREKEA 566
+ + G AS I I+ YA Q L+K +L + K L M V+TVD +QG + +
Sbjct: 1215 FQYMRLLGYPASKISILATYAGQTALIKDVLNHRCSKNTLFGMPKIVTTVDRYQGEQNDY 1274
Query: 567 IIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
II+S+ R+ + VG+L D RR+ VA++RAR
Sbjct: 1275 IILSLTRTRT---VGYLRDVRRLTVALSRAR 1302
Score = 50 (22.7 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 2 EGRKTKEKQSAVSLQEFVS-VMAPLIDLEKEAEISASITSGASRNLD 47
E T+E +A E+ S AP+ D E + G R++D
Sbjct: 960 ENTSTEEIIAAFPFHEYFSNAPAPVFDPSASKETVVDVAEGCQRHID 1006
Score = 50 (22.7 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 28/103 (27%), Positives = 37/103 (35%)
Query: 19 VSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCV---DAQTGLMGKTLLE 75
+ V P + K A + A IT R D + + ++ V Q G GK
Sbjct: 519 IEVAPPKVGSTKPAFVRAEITIEVGRLADHVRTEWDSLRPDDVVFLLAVQPGNQGK--YG 576
Query: 76 FQSTKGDVLPA--HKFGTHDVVVLKPNKADLGSPALGQGVVYR 116
F+ + P H V VL N L PA GQ YR
Sbjct: 577 FRDVEAPQTPGIVHVRSADIVQVLDENGRPLREPASGQTNGYR 619
>UNIPROTKB|Q81NI5 [details] [associations]
symbol:BAS2982 "Conserved domain protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR RefSeq:NP_845517.1 RefSeq:YP_019848.1
RefSeq:YP_029239.1 ProteinModelPortal:Q81NI5 IntAct:Q81NI5
DNASU:1087476 EnsemblBacteria:EBBACT00000012886
EnsemblBacteria:EBBACT00000015522 EnsemblBacteria:EBBACT00000022854
GeneID:1087476 GeneID:2817117 GeneID:2850799 KEGG:ban:BA_3207
KEGG:bar:GBAA_3207 KEGG:bat:BAS2982 HOGENOM:HOG000093512
OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 202 (76.2 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 90/333 (27%), Positives = 146/333 (43%)
Query: 232 IILQEVKRGSKILACAASNIAVD--------NIXXXXXXXXXXXXXXGHPARLLPQVLES 283
II ++G +L A SN AVD I G+ + E+
Sbjct: 185 IISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEKKKKWTPGEIVRYGYSQHEHIRNHET 244
Query: 284 ALDAQVLRGDNSSLASD---IRKEMKALNGKLLKTK----DKNTRREIQKELRTLSKEER 336
L ++++ N S + + + + L K+L K DK +EI+ +LR K+
Sbjct: 245 LLASKLVETTNGSWGEERLYLEETRQELREKILSYKATSADKKRMQEIESDLR---KQRA 301
Query: 337 KRQQLAVTDVIKNADVVLTTLTG-AVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR 395
K +++ + I+NA V+ TL+ A+ + +FDLV++DE + A +A G R
Sbjct: 302 KIKEVE-KEYIENAKVIGATLSKCAIDSLIYERTFDLVVVDEVSMAFVPQIALAASLGKR 360
Query: 396 CILAGDHLQLPP-TVQSVEAEKKGLGRTLFER---LADLYGDEVTS---MLTVQYRMHEH 448
++ GD LQLPP + + E +K LG +F + + E ML Q RMH
Sbjct: 361 IVVCGDFLQLPPIAMANHELVRKWLGEDMFYHAGIVESVNKSEAHPNLFMLQEQRRMHAD 420
Query: 449 IMNWSSKQLYNSKIKAHPSGVKRT--SSTEP----TLLLIDIAGCDMEEKKDEED-STMN 501
I +++ +Y +++ HPS +R + +P +L D + KD S N
Sbjct: 421 ISKFTNSFIYKNRVYDHPSVSERKELAQLQPFANEASVLFDTSQMGAFSLKDAASGSRFN 480
Query: 502 EGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ 534
VAM + GV + IGI+TPY AQ
Sbjct: 481 IMSGLVAMQMMLIGLLDGVQS--IGIVTPYRAQ 511
Score = 153 (58.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 63/210 (30%), Positives = 97/210 (46%)
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT--SSTEP----TLLLIDIAGCDMEE 491
ML Q RMH I +++ +Y +++ HPS +R + +P +L D +
Sbjct: 410 MLQEQRRMHADISKFTNSFIYKNRVYDHPSVSERKELAQLQPFANEASVLFDTSQMGAFS 469
Query: 492 KKDEED-STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKI-LRS--KDDK 547
KD S N VAM + GV + IGI+TPY AQ L +R + K
Sbjct: 470 LKDAASGSRFNIMSGLVAMQMMLIGLLDGVQS--IGIVTPYRAQSRFLSTCIREMLQRTK 527
Query: 548 LKNMEV--STVDGFQGREKEAIIISMVRSNSKKEVGFL----SDRRRMNVAVTRARRQCC 601
+N+ V +TV FQG E++ +I V S ++ G L + R +NVAVTRAR +
Sbjct: 528 YQNIPVLAATVHKFQGSERDMMIFDTVDSYPQERPGVLFFDHKNHRLVNVAVTRARGKFI 587
Query: 602 LVCDT----ETVSSDGFLKRLIEYFEEHAE 627
+ D + +S L +L + E H +
Sbjct: 588 QLSDCHYMCKNLSRKQALSQLTAHIERHGD 617
Score = 41 (19.5 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 132 EGLNSPLRLEKLAN---EVTYR 150
+G +SP +EK+ N E+ YR
Sbjct: 140 DGTSSPKHIEKMKNPKNELAYR 161
>TIGR_CMR|BA_3207 [details] [associations]
symbol:BA_3207 "conserved domain protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
RefSeq:NP_845517.1 RefSeq:YP_019848.1 RefSeq:YP_029239.1
ProteinModelPortal:Q81NI5 IntAct:Q81NI5 DNASU:1087476
EnsemblBacteria:EBBACT00000012886 EnsemblBacteria:EBBACT00000015522
EnsemblBacteria:EBBACT00000022854 GeneID:1087476 GeneID:2817117
GeneID:2850799 KEGG:ban:BA_3207 KEGG:bar:GBAA_3207 KEGG:bat:BAS2982
HOGENOM:HOG000093512 OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 202 (76.2 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 90/333 (27%), Positives = 146/333 (43%)
Query: 232 IILQEVKRGSKILACAASNIAVD--------NIXXXXXXXXXXXXXXGHPARLLPQVLES 283
II ++G +L A SN AVD I G+ + E+
Sbjct: 185 IISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEKKKKWTPGEIVRYGYSQHEHIRNHET 244
Query: 284 ALDAQVLRGDNSSLASD---IRKEMKALNGKLLKTK----DKNTRREIQKELRTLSKEER 336
L ++++ N S + + + + L K+L K DK +EI+ +LR K+
Sbjct: 245 LLASKLVETTNGSWGEERLYLEETRQELREKILSYKATSADKKRMQEIESDLR---KQRA 301
Query: 337 KRQQLAVTDVIKNADVVLTTLTG-AVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR 395
K +++ + I+NA V+ TL+ A+ + +FDLV++DE + A +A G R
Sbjct: 302 KIKEVE-KEYIENAKVIGATLSKCAIDSLIYERTFDLVVVDEVSMAFVPQIALAASLGKR 360
Query: 396 CILAGDHLQLPP-TVQSVEAEKKGLGRTLFER---LADLYGDEVTS---MLTVQYRMHEH 448
++ GD LQLPP + + E +K LG +F + + E ML Q RMH
Sbjct: 361 IVVCGDFLQLPPIAMANHELVRKWLGEDMFYHAGIVESVNKSEAHPNLFMLQEQRRMHAD 420
Query: 449 IMNWSSKQLYNSKIKAHPSGVKRT--SSTEP----TLLLIDIAGCDMEEKKDEED-STMN 501
I +++ +Y +++ HPS +R + +P +L D + KD S N
Sbjct: 421 ISKFTNSFIYKNRVYDHPSVSERKELAQLQPFANEASVLFDTSQMGAFSLKDAASGSRFN 480
Query: 502 EGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ 534
VAM + GV + IGI+TPY AQ
Sbjct: 481 IMSGLVAMQMMLIGLLDGVQS--IGIVTPYRAQ 511
Score = 153 (58.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 63/210 (30%), Positives = 97/210 (46%)
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT--SSTEP----TLLLIDIAGCDMEE 491
ML Q RMH I +++ +Y +++ HPS +R + +P +L D +
Sbjct: 410 MLQEQRRMHADISKFTNSFIYKNRVYDHPSVSERKELAQLQPFANEASVLFDTSQMGAFS 469
Query: 492 KKDEED-STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKI-LRS--KDDK 547
KD S N VAM + GV + IGI+TPY AQ L +R + K
Sbjct: 470 LKDAASGSRFNIMSGLVAMQMMLIGLLDGVQS--IGIVTPYRAQSRFLSTCIREMLQRTK 527
Query: 548 LKNMEV--STVDGFQGREKEAIIISMVRSNSKKEVGFL----SDRRRMNVAVTRARRQCC 601
+N+ V +TV FQG E++ +I V S ++ G L + R +NVAVTRAR +
Sbjct: 528 YQNIPVLAATVHKFQGSERDMMIFDTVDSYPQERPGVLFFDHKNHRLVNVAVTRARGKFI 587
Query: 602 LVCDT----ETVSSDGFLKRLIEYFEEHAE 627
+ D + +S L +L + E H +
Sbjct: 588 QLSDCHYMCKNLSRKQALSQLTAHIERHGD 617
Score = 41 (19.5 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 132 EGLNSPLRLEKLAN---EVTYR 150
+G +SP +EK+ N E+ YR
Sbjct: 140 DGTSSPKHIEKMKNPKNELAYR 161
>ASPGD|ASPL0000069352 [details] [associations]
symbol:AN7246 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR000641 InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 PRINTS:PR00819 SMART:SM00382
GO:GO:0005524 EMBL:BN001304 eggNOG:COG0464 GO:GO:0017111
EMBL:AACD01000123 RefSeq:XP_680515.1 ProteinModelPortal:Q5AWT4
EnsemblFungi:CADANIAT00000198 GeneID:2870136 KEGG:ani:AN7246.2
HOGENOM:HOG000168598 OMA:LDNQFRL OrthoDB:EOG4CJZR5 Uniprot:Q5AWT4
Length = 2310
Score = 145 (56.1 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 74/271 (27%), Positives = 121/271 (44%)
Query: 301 IRKEMKAL-NGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVV-LTTLT 358
IR+E A KLL+ N + I + R K + + DV+ + ++ TT
Sbjct: 671 IRQEKIAYWKEKLLEEHVVNVQGLIARLDRCQKKLDEMWNE-RTRDVLLSKRIIGCTTTA 729
Query: 359 GAVSRK-LDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS--VEA 414
A++ L+ TS +V+++EA + LE AL ++ I+ GDH QL P + + +
Sbjct: 730 AAINASVLNTTSPGVVLLEEAGEILESHVLTALGSHTKQLIMIGDHQQLRPKINNYALSV 789
Query: 415 EK-KG--LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLY-------NSKIKA 464
EK G L R+LFERL + S L Q+RM I + Y +K +
Sbjct: 790 EKGSGYDLNRSLFERLVE--SGYPHSTLAKQHRMAPEISALVRRLTYPDLLDGDKTKTRL 847
Query: 465 HPSGVKRT----SSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGV 520
P G++ ++P L ++ D + K + +T E ++ + K L Q G
Sbjct: 848 APRGLQNRVVFIDHSQPEGFLHGVSDRDGDGGKGSKQNTF---EVKLVLKIVKYLGQQGY 904
Query: 521 HASDIGIITPYAAQVVLLKI-LRSKDDKLKN 550
+ I+TPY Q+ LL+ LR D + N
Sbjct: 905 GTDKLVILTPYLGQLHLLREELRKDTDPVLN 935
Score = 118 (46.6 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 20/61 (32%), Positives = 42/61 (68%)
Query: 551 MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS 610
+++ST+D +QG E + +I ++ RSN ++GF+S +R+NV ++RAR ++ ++ T +
Sbjct: 960 IKLSTIDNYQGEESDIVIATLTRSNKDGDIGFMSAPQRLNVLLSRARDVLIMIGNSNTFT 1019
Query: 611 S 611
+
Sbjct: 1020 N 1020
Score = 39 (18.8 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 285 LDAQ--VLRGDNSSLASDIRKEMKALNGKLLKTK 316
LD Q +LR D + S+IR+E A GK K +
Sbjct: 246 LDNQFRLLRED---MLSEIREEFLAARGKKQKRR 276
Score = 37 (18.1 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 27 DLEKEAEISASITSGASRNLDTAQK 51
D+ +E +++ S S N DT Q+
Sbjct: 578 DISEELDMAFSAYSSFKLNYDTLQE 602
>RGD|1306056 [details] [associations]
symbol:Pric285 "peroxisomal proliferator-activated receptor A
interacting complex 285" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0004540 "ribonuclease activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 RGD:1306056 GO:GO:0005524
GO:GO:0003723 GO:GO:0004386 GO:GO:0004540 PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 IPI:IPI00567928 RefSeq:XP_001057758.2
RefSeq:XP_230961.5 UniGene:Rn.47450 ProteinModelPortal:D4ADC2
Ensembl:ENSRNOT00000017787 GeneID:296474 KEGG:rno:296474
UCSC:RGD:1306056 CTD:296474 OrthoDB:EOG4Q84WM NextBio:641262
ArrayExpress:D4ADC2 Uniprot:D4ADC2
Length = 2944
Score = 207 (77.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 67/249 (26%), Positives = 117/249 (46%)
Query: 347 IKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL---KGSRCILAGDHL 403
++ V+L T + A S L + ++IDEA A E I L+ K + +L GDH
Sbjct: 2626 LERHSVILCTCSCAASGSLKALNVRQILIDEAGMATEPETLIPLVCFSKTEKVVLLGDHK 2685
Query: 404 QLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK 463
QL P V++ + G+ R+LFER + D + ML QYRMH+ I ++ S + Y K+K
Sbjct: 2686 QLRPVVKNEQLRNLGMDRSLFERY---HRDAI--MLDTQYRMHKDICSFPSMEFYGGKLK 2740
Query: 464 AH------PSGVKRTSSTEPTLLLIDIAGCDME----EKKDEEDSTMNEGEAEVAMAHAK 513
PS + ++ + G + + ++ E+S N E + K
Sbjct: 2741 TWSDLKRPPSLLGHVGKQSCPVIFGSVQGYEQKLLVSTEEGNENSRANPEEVTEVVRIIK 2800
Query: 514 RL-IQSGVHASDIGIITPYAAQVVLLKILRSKDDK-LKNMEVSTVDGFQGREKEAIIISM 571
+L + V D+ ++TPY AQ + R + + + V+++ QG E +I+S
Sbjct: 2801 QLTLDRTVDPKDVAVLTPYNAQAAAIS--RGLMQRGVTGVTVTSITKSQGSEWRYVIVST 2858
Query: 572 VRSNSKKEV 580
VR+ + ++
Sbjct: 2859 VRTCPRSDM 2867
Score = 181 (68.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 84/296 (28%), Positives = 131/296 (44%)
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIAL---LKGSRCILAGDHLQLPPT 408
+V+TT + A ++ F + IDEAAQ LE I L L +R +LAGDH+Q+ P
Sbjct: 888 LVVTTTSQARELQVPAGFFSHIFIDEAAQMLECEALIPLSYALTLTRVVLAGDHMQVTPR 947
Query: 409 VQSVEAEKKGLGRTLFERLADLYGDEVTSMLT-------VQYRMHEHIMNWSSKQLYNSK 461
+ SV +K G L RL Y EV + YR I+N+ S+ Y +K
Sbjct: 948 LFSVPRDKAA-GHMLLHRLFLYYQQEVHKIAQHSRIVFHENYRSTAAIINFVSRHFYVAK 1006
Query: 462 IKA-HPSG-VKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG 519
SG V R P L+ +AG E+ S +N E + + + +
Sbjct: 1007 GNPIQASGKVPRHPQHYP-LMFCHVAGSP--EQDMSRTSWLNSAEVTQVVEKVQEIYNTW 1063
Query: 520 VHA------SDIGIITPYAAQVVLLKI-LRSKDDKLKNMEVSTVDGFQGREKEAIIISMV 572
H I ++ + AQV L+ LR ++ L + V + + GRE +++S V
Sbjct: 1064 PHCWGPREQRHICAVS-HGAQVSALRQELRRRN--LGEVSVGSFEILPGREFRVVVLSSV 1120
Query: 573 RS-NSKKEVG-----FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
+ NS G F ++ R +N +TRA+ Q V D + S G ++L + F
Sbjct: 1121 HNRNSLLSPGAPTSEFFTEPRVLNTVMTRAQSQLVAVGDAVALCSSGACRKLWKNF 1176
Score = 37 (18.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 305 MKALNGKLLKTKDKNTRREIQKELRTLSKEERKR 338
M+ + ++L+ + T + K+L L KEE R
Sbjct: 2310 MEKVPEEVLRPSTRFTVEVLSKQLPDLRKEEAVR 2343
>UNIPROTKB|Q886X0 [details] [associations]
symbol:PSPTO_1455 "Uncharacterized protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE016853 GenomeReviews:AE016853_GR eggNOG:COG1112
InterPro:IPR024402 Pfam:PF10881 RefSeq:NP_791281.1
ProteinModelPortal:Q886X0 GeneID:1183092 KEGG:pst:PSPTO_1455
PATRIC:19994154 HOGENOM:HOG000273296 OMA:HYRCHPK
ProtClustDB:CLSK879830 BioCyc:PSYR223283:GJIX-1482-MONOMER
Uniprot:Q886X0
Length = 758
Score = 182 (69.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 78/286 (27%), Positives = 125/286 (43%)
Query: 353 VLTTLTGAVSRKLDNTS-FDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLP--PTV 409
V+ + T ++ L + D VIIDEA+Q + +AL I+ GD QL P
Sbjct: 315 VIGSSTHSIVNSLGGKAVLDYVIIDEASQQDIVPGVLALSCAKNLIIVGDRKQLAHIPEK 374
Query: 410 QSVEAEKKGLG---RTLFERLADLYGDEVT-SMLTVQYRMHEHIMNWSSKQLYNSKIKAH 465
+EA +L + ++GD + ++L YR H I+ + ++Q Y++++
Sbjct: 375 LGLEAPAPWYDCETYSLLDSCVGVFGDSIPMTLLKEHYRCHPRIIQFCNQQFYDNQLVPM 434
Query: 466 PSGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAK-RLIQSGVHASD 524
S T LL+ G +S + E ++ +A+ I G
Sbjct: 435 TQDAGEQSLT----LLVTAKG-----NHTRNNSNLRELDSLLAVLDGSGESIWEGEDGR- 484
Query: 525 IGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMV--RSNSKKEVGF 582
G I P+ Q L D N TV FQGRE + I+ S V + S + + F
Sbjct: 485 -GFIAPFKNQATLSGSCLPAD--FIN---DTVHKFQGRECDEIVFSTVLDKHKSPERLSF 538
Query: 583 LSDRRRMNVAVTRARRQCCLVC-DTETVSSDGFLKRLIEYFEEHAE 627
+ D R +NVAV+RA+ + LV D + +G + LI Y E +AE
Sbjct: 539 VDDARMVNVAVSRAKNRFTLVTGDGVFKAGNGHIAALIRYMEYYAE 584
>FB|FBgn0033889 [details] [associations]
symbol:CG6701 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 SMART:SM00355 GO:GO:0008270 GO:GO:0005622
FlyBase:FBgn0033889 ChiTaRS:CG6701 EMBL:AY128442
ProteinModelPortal:Q8MQQ9 STRING:Q8MQQ9 PRIDE:Q8MQQ9
InParanoid:Q8MQQ9 ArrayExpress:Q8MQQ9 Bgee:Q8MQQ9 Uniprot:Q8MQQ9
Length = 1261
Score = 182 (69.1 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 62/221 (28%), Positives = 107/221 (48%)
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH-PSGVK-R-------TSSTEPTLLL 481
Y V + L +R H I++ + Y ++ P + R ++T P ++
Sbjct: 762 YNASVQTRLIRNFRSHPEIVSLYNNMYYEGHLRTEAPMEIVCRFHNWFYLPNATFP-IMF 820
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHA-----SDIGIITPYAAQVV 536
+ G M K S N E +V M + K L+ G++ +DIGII+PY Q
Sbjct: 821 HSVFGTTMNTKSSV--SLCNNKEIDVVMDYVKDLMYFGLNGEKLLQTDIGIISPYKNQYQ 878
Query: 537 LLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
++ + + ++ +V+ FQG+EK II+S VRS + K +GFL++ RR+NV ++R
Sbjct: 879 RIQEQLNMRN-WSQIDCGSVELFQGKEKHVIIVSFVRSFTPK-LGFLNNERRLNVLLSRP 936
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
L+ + T+S + + +IE + L G +YLNE
Sbjct: 937 ISLLILIGNPRTLSQNSDFQHIIEMCRNR-KTLVGEQYLNE 976
>UNIPROTKB|F8VR31 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 IPI:IPI01022599 ProteinModelPortal:F8VR31
Ensembl:ENST00000551118 UCSC:uc001jog.2 ArrayExpress:F8VR31
Bgee:F8VR31 Uniprot:F8VR31
Length = 807
Score = 188 (71.2 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 44/128 (34%), Positives = 76/128 (59%)
Query: 495 EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVS 554
E+ N EA++ + +++G SDIGII PY Q+ ++ L ++ + +EV+
Sbjct: 669 EKGGVSNVTEAKLIVFLTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARS--IGMVEVN 726
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVG-FLSDRRRMNVAVTRARRQCCLVCDTETVSSDG 613
TVD +QGR+K +++S VRSN VG L D RR+NVA+TRA+ + L+ +++
Sbjct: 727 TVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNVAITRAKHKLILLGCVPSLNCYP 786
Query: 614 FLKRLIEY 621
L++L+ +
Sbjct: 787 PLEKLLNH 794
Score = 39 (18.8 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 295 SSLASDIRKEMKALNGKLLKTKDKNTRR 322
+S+AS IR +A+ + ++ D TR+
Sbjct: 128 TSIASSIRCMRRAVLSETFRSSDPATRQ 155
Score = 38 (18.4 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 137 PLRLE--KLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVL-FGEQKP 181
PL L+ K +N + +R LS+ + P AGL+ L G+ P
Sbjct: 296 PLELKTGKESNSIEHRSQVVLYTLLSQERRADPEAGLLLYLKTGQMYP 343
>FB|FBgn0041164 [details] [associations]
symbol:armi "armitage" species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS;IMP] [GO:0007319 "negative
regulation of oskar mRNA translation" evidence=IMP] [GO:0000578
"embryonic axis specification" evidence=NAS;IMP] [GO:0016325
"oocyte microtubule cytoskeleton organization" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007317 "regulation of
pole plasm oskar mRNA localization" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0003678 "DNA helicase activity"
evidence=NAS] [GO:0030425 "dendrite" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0007616 "long-term memory"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0045202
"synapse" evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0046843 "dorsal appendage
formation" evidence=IMP] [GO:0007318 "pole plasm protein
localization" evidence=IMP] [GO:0070725 "Yb body" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] GO:GO:0005524
GO:GO:0005737 EMBL:AE014296 GO:GO:0016246 GO:GO:0000184
GO:GO:0030424 GO:GO:0043025 GO:GO:0030425 GO:GO:0007616
GO:GO:0045202 GO:GO:0007318 eggNOG:COG1112 EMBL:AY598469
RefSeq:NP_001014556.1 RefSeq:NP_647816.2 ProteinModelPortal:Q6J5K9
SMR:Q6J5K9 IntAct:Q6J5K9 STRING:Q6J5K9 PaxDb:Q6J5K9 GeneID:38427
KEGG:dme:Dmel_CG11513 UCSC:CG11513-RA CTD:38427 FlyBase:FBgn0041164
InParanoid:Q6J5K9 OMA:ITISTCT OrthoDB:EOG4DZ094 PhylomeDB:Q6J5K9
GenomeRNAi:38427 NextBio:808602 Bgee:Q6J5K9 GermOnline:CG11513
GO:GO:0070725 GO:GO:0003678 GO:GO:0046843 GO:GO:0031023
InterPro:IPR026122 PANTHER:PTHR10887:SF17 Uniprot:Q6J5K9
Length = 1274
Score = 149 (57.5 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 42/144 (29%), Positives = 76/144 (52%)
Query: 492 KKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNM 551
+ ++ S N E L ++ V A IGIITPY QV +L+ + D +
Sbjct: 1098 QNNDSPSWFNPQEVREVFLMTIALYRANVTADQIGIITPYQKQVKMLRSMFIGTDVVMP- 1156
Query: 552 EVSTVDGFQGREKEAIIISMVRSN-------SKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
++ +V+ FQG+E++ I+IS VRS+ ++ +GF+ +R+NVAV+RAR +
Sbjct: 1157 KIGSVEEFQGQERDIILISTVRSSEEILRMDARFSLGFVRCSKRLNVAVSRARAMMIIFG 1216
Query: 605 DTETVSSDGFLKRLIEYFEEHAEY 628
+ ++ D ++LI + ++ Y
Sbjct: 1217 NPHLLAVDECWRQLILFCVKNNAY 1240
Score = 123 (48.4 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 62/216 (28%), Positives = 90/216 (41%)
Query: 392 KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA-------DL--------YGDEVT 436
K S+ +L+GD QL V S A K G + ERL DL Y V
Sbjct: 968 KRSQVVLSGDPRQLQSIVTSRIASKMGFSISFLERLLERSPYRKDLQRFPESSGYNPLVL 1027
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSK-IKAHPSGVKRTSSTEPTLLLI-----DIAGCD-- 488
+ L YR IM+ S+ Y+ + I R S L + DI
Sbjct: 1028 TKLLYNYRALPSIMSIYSRLFYDDELIPVLSEKDSRESRLLSKLRCVFESEKDIPQAHGT 1087
Query: 489 -----MEEKKDEEDST--MNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL 541
+ E + DS N E L ++ V A IGIITPY QV +L+ +
Sbjct: 1088 FFYGIIGENRQNNDSPSWFNPQEVREVFLMTIALYRANVTADQIGIITPYQKQVKMLRSM 1147
Query: 542 RSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSK 577
D + ++ +V+ FQG+E++ I+IS VRS+ +
Sbjct: 1148 FIGTDVVMP-KIGSVEEFQGQERDIILISTVRSSEE 1182
Score = 82 (33.9 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 76/339 (22%), Positives = 135/339 (39%)
Query: 111 QGVVYRLKDSSITVAFDDIPEEGLNSP-LRLEKLANEVTYRRMKDALIQLSKGVQNGPAA 169
+G+++++ I + F +E N RLE + ++R+ A+ ++ GV
Sbjct: 690 EGIIHKVLFDRILLKFHSSFQEKYNGEDYRLEFYFSRYSFRKQHHAISKIV-GVMGEDFL 748
Query: 170 GLIPVLFGE--QKPTVLKKDIAF------KPFNSNLDHSQKDAISKAL--SSKNV-FMLH 218
V E Q +K D + + +N +L+ QK A+ L ++N+ ++L
Sbjct: 749 FPSKVTKRENPQLDVYMKDDDMYLYDSKLEWYNQSLNSIQKRAVFNILRGEAENIPYVLF 808
Query: 219 XXXXXXXXXXVVEIILQEVKR--GSKILACAASNIAVDNIXXXXXXXXXXXXXXGHPARL 276
++E +LQ V+ G++IL SN + D + G RL
Sbjct: 809 GPPGSGKTMTLIETLLQLVRNLPGARILVGTPSNSSADLVTKRLIDSKALLQ--GDFIRL 866
Query: 277 LP--QVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKE 334
+ QV + + +++ + SD+ G + +DK E +LR +K
Sbjct: 867 VSYNQVEKDLIPPEIM---SYCATSDV--------GAVGSCEDKMMVTESGLKLRCQAKF 915
Query: 335 ERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL--- 391
+ +T I TTL + F V+ DEA Q E + ++
Sbjct: 916 IGTHR---IT--ISTC----TTLGNFLQLGFPAGHFTHVLFDEAGQCTEPETMVPIVMLT 966
Query: 392 -KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
K S+ +L+GD QL V S A K G + ERL +
Sbjct: 967 KKRSQVVLSGDPRQLQSIVTSRIASKMGFSISFLERLLE 1005
Score = 40 (19.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 19/66 (28%), Positives = 31/66 (46%)
Query: 323 EIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQAL 382
E+ KELR + +RQ++ IK + + LT +S K F L++ E
Sbjct: 578 EVPKELRQICLTSERRQEM-----IKAIEQHYSFLTEPLSIKTYMHRFRLLLHLE----- 627
Query: 383 EIACWI 388
EI C++
Sbjct: 628 EIECFV 633
>ZFIN|ZDB-GENE-040426-1189 [details] [associations]
symbol:aqr "aquarius homolog (mouse)" species:7955
"Danio rerio" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 ZFIN:ZDB-GENE-040426-1189
GO:GO:0005681 GO:GO:0000398 CTD:9716 HOGENOM:HOG000170551
HOVERGEN:HBG080430 KO:K12874 GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:BC160661 IPI:IPI00861759 RefSeq:NP_956758.2 UniGene:Dr.17308
ProteinModelPortal:B1H1M2 DNASU:393436 GeneID:393436
KEGG:dre:393436 eggNOG:NOG272077 NextBio:20814473
ArrayExpress:B1H1M2 Uniprot:B1H1M2
Length = 1525
Score = 178 (67.7 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 72/218 (33%), Positives = 106/218 (48%)
Query: 395 RCILAGDHLQLPPTVQSVEAEK-KGLGRTLFERLADLYGDEVTSMLTVQYRMHE---HIM 450
R I+ GDH QLPP ++++ +K + ++LF R L V L Q R ++
Sbjct: 1089 RWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRLGVPTVD--LDAQGRARASLCNLY 1146
Query: 451 NWSSKQLYN-SKIKAHPSGVKRTSSTEPTL--LLI---DIAGCDMEEKKDEEDSTMNEGE 504
NW KQL N ++ P RT + T LI D G E + E E
Sbjct: 1147 NWRYKQLGNLPHVQLQPEF--RTPNPGFTFDFQLINVEDFNGVGESEPNPYFYQNLAEAE 1204
Query: 505 AEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL---RSKDDKL--KNMEVSTVDGF 559
VA+ RL+ G A I I+T Y Q L++ + R + + +V+TVD F
Sbjct: 1205 YSVALYMYMRLL--GYPAERISILTTYNGQKHLIRDVIHQRCASNSFFGQPSKVTTVDRF 1262
Query: 560 QGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
QG++ + II+S+VR+ K VG L D RR+ VA++RAR
Sbjct: 1263 QGQQNDYIILSLVRT---KAVGHLRDVRRLVVAMSRAR 1297
>RGD|1306223 [details] [associations]
symbol:Aqr "aquarius homolog (mouse)" species:10116 "Rattus
norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901 RGD:1306223
GO:GO:0005681 GO:GO:0000398 GO:GO:0097157 PANTHER:PTHR10887:SF5
IPI:IPI00389267 ProteinModelPortal:D3ZZP0
Ensembl:ENSRNOT00000011917 UCSC:RGD:1306223 ArrayExpress:D3ZZP0
Uniprot:D3ZZP0
Length = 1353
Score = 174 (66.3 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 64/214 (29%), Positives = 105/214 (49%)
Query: 395 RCILAGDHLQLPPTVQSVEAEK-KGLGRTLFERLADLYGDEVTSMLTVQYRMHE---HIM 450
R I+ GDH QLPP ++++ +K + ++LF R + V L Q R ++
Sbjct: 1090 RWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVD--LDAQGRARASLCNLY 1147
Query: 451 NWSSKQLYN-SKIKAHPSGVKRTSSTEPTLLLIDIAGCD-MEEKKDEEDSTMNEGEAEVA 508
NW K L N ++ P + LI++ + E + N GEAE
Sbjct: 1148 NWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAEYV 1207
Query: 509 MAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL---RSKDDKL--KNMEVSTVDGFQGRE 563
+A + G A I I+T Y Q L++ + R ++ L + +V+TVD FQG++
Sbjct: 1208 VALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQ 1267
Query: 564 KEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
+ I++S+VR+ + VG L D RR+ VA++RAR
Sbjct: 1268 NDYILLSLVRTRA---VGHLRDVRRLVVAMSRAR 1298
>WB|WBGene00001258 [details] [associations]
symbol:emb-4 species:6239 "Caenorhabditis elegans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0009792 GO:GO:0040010 GO:GO:0010171
GO:GO:0040011 GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112
HOGENOM:HOG000170551 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467 EMBL:AL132853
GeneID:180232 KEGG:cel:CELE_Y80D3A.2 CTD:180232
RefSeq:NP_001256831.1 ProteinModelPortal:Q9U1Q7 SMR:Q9U1Q7
PaxDb:Q9U1Q7 PRIDE:Q9U1Q7 EnsemblMetazoa:Y80D3A.2a.1
EnsemblMetazoa:Y80D3A.2a.2 UCSC:Y80D3A.2.1 WormBase:Y80D3A.2a
InParanoid:Q9U1Q7 NextBio:908508 ArrayExpress:Q9U1Q7 Uniprot:Q9U1Q7
Length = 1467
Score = 174 (66.3 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 68/214 (31%), Positives = 99/214 (46%)
Query: 395 RCILAGDHLQLPPTVQSVEAEK-KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN-- 451
R I+ GDH QLPP VQ+ +K + ++LF RL L V L Q R I
Sbjct: 1092 RWIMIGDHHQLPPVVQNQAFQKYSNMEQSLFARLVRLSVPNV--QLDRQGRARAQIAELY 1149
Query: 452 -WSSKQLYN-SKIKAHPSGVKRTSSTEPTLLLIDIAGCDME-EKKDEEDSTMNEGEAEVA 508
W L N + P + IDI + E + N GEAE A
Sbjct: 1150 QWRYNGLGNLPHVDGLPQFQNANAGFAFPFQFIDIPDFNGHGETQPSPHFYQNLGEAEYA 1209
Query: 509 MAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL---RSKDDKLKNM--EVSTVDGFQGRE 563
A + G A I I+T Y Q L++ + R + L M +VSTVD +QG++
Sbjct: 1210 CALYTYMRILGYPAEKISILTTYNGQAQLIRDVFQRRCDTNPLIGMPAKVSTVDKYQGQQ 1269
Query: 564 KEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
+ II+S+V++ + +G + D RR+ VA++RAR
Sbjct: 1270 NDFIILSLVKT---RNIGHIRDVRRLVVALSRAR 1300
>MGI|MGI:1276102 [details] [associations]
symbol:Aqr "aquarius" species:10090 "Mus musculus"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 MGI:MGI:1276102 GO:GO:0000398
CTD:9716 eggNOG:COG1112 HOGENOM:HOG000170551 HOVERGEN:HBG080430
KO:K12874 OMA:RTKAVGH OrthoDB:EOG4ZPDTF GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 EMBL:AK122310 EMBL:AK145547 EMBL:AK151716
EMBL:BC042479 EMBL:U90333 IPI:IPI00330263 RefSeq:NP_033832.2
UniGene:Mm.2545 ProteinModelPortal:Q8CFQ3 SMR:Q8CFQ3
PhosphoSite:Q8CFQ3 PaxDb:Q8CFQ3 PRIDE:Q8CFQ3
Ensembl:ENSMUST00000043160 GeneID:11834 KEGG:mmu:11834
GeneTree:ENSGT00700000104467 InParanoid:Q8CFQ3 NextBio:279759
Bgee:Q8CFQ3 CleanEx:MM_AQR Genevestigator:Q8CFQ3
GermOnline:ENSMUSG00000040383 Uniprot:Q8CFQ3
Length = 1481
Score = 174 (66.3 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 64/214 (29%), Positives = 105/214 (49%)
Query: 395 RCILAGDHLQLPPTVQSVEAEK-KGLGRTLFERLADLYGDEVTSMLTVQYRMHE---HIM 450
R I+ GDH QLPP ++++ +K + ++LF R + V L Q R ++
Sbjct: 1094 RWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVD--LDAQGRARASLCNLY 1151
Query: 451 NWSSKQLYN-SKIKAHPSGVKRTSSTEPTLLLIDIAGCD-MEEKKDEEDSTMNEGEAEVA 508
NW K L N ++ P + LI++ + E + N GEAE
Sbjct: 1152 NWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAEYV 1211
Query: 509 MAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL---RSKDDKL--KNMEVSTVDGFQGRE 563
+A + G A I I+T Y Q L++ + R ++ L + +V+TVD FQG++
Sbjct: 1212 VALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQ 1271
Query: 564 KEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
+ I++S+VR+ + VG L D RR+ VA++RAR
Sbjct: 1272 NDYILLSLVRTRA---VGHLRDVRRLVVAMSRAR 1302
>DICTYBASE|DDB_G0274797 [details] [associations]
symbol:aqr "intron-binding protein aquarius homolog"
species:44689 "Dictyostelium discoideum" [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR024860 dictyBase:DDB_G0274797
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000012
GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 RefSeq:XP_643918.1 ProteinModelPortal:Q555Z2
PRIDE:Q555Z2 EnsemblProtists:DDB0233439 GeneID:8619345
KEGG:ddi:DDB_G0274797 InParanoid:Q555Z2 ProtClustDB:CLSZ2431000
Uniprot:Q555Z2
Length = 1487
Score = 183 (69.5 bits), Expect = 4.8e-09, Sum P(3) = 4.8e-09
Identities = 68/227 (29%), Positives = 111/227 (48%)
Query: 395 RCILAGDHLQLPPTVQSVEAEKKG-LGRTLFERLADLYGDEVTSMLTVQYRMHEHI---M 450
R IL GDH QLPP VQ+ K ++LF RL L +T L Q R I
Sbjct: 1197 RVILIGDHNQLPPIVQNQSLAKYSHFDQSLFTRLIRLEIPHIT--LDRQGRSRPSISELF 1254
Query: 451 NWSSKQLYNSKIKAHPSGVKRTS---STEPTLLLIDIA-GCDMEEKKDEEDSTMNEGEAE 506
+W K L + + K + + + L+ +D + G + E + N GEAE
Sbjct: 1255 SWKYKGLQDLPLVKEQLQFKLANPGLAYDYQLINVDESDGYGVGESEPTPYFYQNLGEAE 1314
Query: 507 VAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK-ILRSK---DDKLKN-----MEVSTVD 557
+A + LI G + I ++T Y Q LL+ + ++K D K ++++T+D
Sbjct: 1315 YIVAMFQYLIAIGYPSEKITVLTTYNGQKNLLRDVFKAKCTPQDPKKTQYGLPLKITTID 1374
Query: 558 GFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
+QG++ + I++S+VR+ K+ G + D RR+ VA++RAR + C
Sbjct: 1375 KYQGQQNDIILLSLVRT---KQYGHIRDVRRLIVAMSRARLGLYIFC 1418
Score = 47 (21.6 bits), Expect = 4.8e-09, Sum P(3) = 4.8e-09
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 346 VIKNADVVLTTLTGAVSRKLD----NTSFDLVIIDEAAQALEIACWIAL 390
++K + +V T T A ++ + FD ++++E+AQ +I +I L
Sbjct: 1114 LLKQSKIVAMTCTHAALKRNELLRLGFKFDNLLMEESAQISDIESFIPL 1162
Score = 39 (18.8 bits), Expect = 4.8e-09, Sum P(3) = 4.8e-09
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 191 KPFNSNLDHSQKDAISKALSSKNVF 215
K +S+ D+S+++ S + S KN+F
Sbjct: 138 KSSSSSDDNSEQEESSPSSSFKNLF 162
>UNIPROTKB|F1PA16 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0000398 OMA:RTKAVGH GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467
EMBL:AAEX03016041 Ensembl:ENSCAFT00000013319 Uniprot:F1PA16
Length = 1483
Score = 173 (66.0 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 64/214 (29%), Positives = 104/214 (48%)
Query: 395 RCILAGDHLQLPPTVQSVEAEK-KGLGRTLFERLADLYGDEVTSMLTVQYRMHE---HIM 450
R I+ GDH QLPP ++++ +K + ++LF R + V L Q R ++
Sbjct: 1089 RWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVD--LDAQGRARASLCNLY 1146
Query: 451 NWSSKQLYN-SKIKAHPSGVKRTSSTEPTLLLIDIAGCD-MEEKKDEEDSTMNEGEAEVA 508
NW K L N ++ P + LI++ + E + N GEAE
Sbjct: 1147 NWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAEYV 1206
Query: 509 MAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL---RSKDDKL--KNMEVSTVDGFQGRE 563
+A + G A I I+T Y Q L++ + R + L + +V+TVD FQG++
Sbjct: 1207 VALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQ 1266
Query: 564 KEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
+ I++S+VR+ + VG L D RR+ VA++RAR
Sbjct: 1267 NDYILLSLVRTRA---VGHLRDVRRLVVAMSRAR 1297
>UNIPROTKB|F1MUW2 [details] [associations]
symbol:F1MUW2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:DAAA02028420 EMBL:DAAA02028416
EMBL:DAAA02028417 EMBL:DAAA02028418 EMBL:DAAA02028419
IPI:IPI00852511 Ensembl:ENSBTAT00000016895 Uniprot:F1MUW2
Length = 1466
Score = 171 (65.3 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 67/217 (30%), Positives = 106/217 (48%)
Query: 395 RCILAGDHLQLPPTVQSVEAEK-KGLGRTLFERLADLYGDEVTSMLTVQYRMHE---HIM 450
R I+ GDH QLPP ++++ +K + ++LF R + V L Q R ++
Sbjct: 1072 RWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVD--LDAQGRARASLCNLY 1129
Query: 451 NWSSKQLYNSKIKAHPSGVKRTSSTEPTLL----LIDIAGCD-MEEKKDEEDSTMNEGEA 505
NW K L N H + S+ LL LI++ + E + N GEA
Sbjct: 1130 NWRYKNLGNLP---HVQLLLEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEA 1186
Query: 506 EVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL---RSKDDKL--KNMEVSTVDGFQ 560
E +A + G A I I+T Y Q L++ + R + L + +V+TVD FQ
Sbjct: 1187 EYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQ 1246
Query: 561 GREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
G++ + I++S+VR+ + VG L D RR+ VA++RAR
Sbjct: 1247 GQQNDYILLSLVRTRA---VGHLRDVRRLVVAMSRAR 1280
>UNIPROTKB|F1NPB8 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:AADN02003289 EMBL:AADN02003288
IPI:IPI00597734 Ensembl:ENSGALT00000015995 Uniprot:F1NPB8
Length = 1416
Score = 166 (63.5 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 65/215 (30%), Positives = 106/215 (49%)
Query: 395 RCILAGDHLQLPPTVQSVEAEK-KGLGRTLFERLADLYGDEVTSMLTVQYRMHE---HIM 450
R I+ GDH QLPP ++++ +K + ++LF R + V L Q R ++
Sbjct: 1099 RWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVD--LDAQGRARASLCNLY 1156
Query: 451 NWSSKQLYN-SKIKAHPSGVKRTSSTEPTLLLIDIAGCD-MEEKKDEEDSTMNEGEAEVA 508
NW K L N ++ P + LI++ + + E + N GEAE
Sbjct: 1157 NWRYKNLGNLPHVQLMPEFRTANAGFLYDFQLINVEDFNGVGESEPNPYFYQNLGEAEYV 1216
Query: 509 MAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL---RSKDDKL--KNMEVSTVDGFQGRE 563
+A + G A I I+T Y Q L++ + R ++ L + +V+TVD FQG++
Sbjct: 1217 VAVFMYMCLLGYPADRISILTTYNGQKHLIRDVINQRCGNNPLIGRPNKVTTVDRFQGQQ 1276
Query: 564 KEAIIISMVRSNSKKEVGFLS-DRRRMNVAVTRAR 597
+ I++S+VR+ K VG L D RR+ VA++RAR
Sbjct: 1277 NDYILLSLVRT---KAVGHLRRDVRRLVVAMSRAR 1308
>UNIPROTKB|F1SBP9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035279 "mRNA cleavage involved in gene silencing by
miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:CU861480 RefSeq:XP_003481536.1 UniGene:Ssc.19573
Ensembl:ENSSSCT00000007422 GeneID:100521086 KEGG:ssc:100521086
Uniprot:F1SBP9
Length = 1001
Score = 160 (61.4 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 49/161 (30%), Positives = 82/161 (50%)
Query: 490 EEKKDEEDSTMNEGEAEVAMAHAKRLIQSG-------VHASDIGIITPYAAQVVLL---- 538
+E++ S N EA ++ K+L+ S + +G+I+PY QV +
Sbjct: 785 DEREGNSPSFFNPEEAATVTSYLKQLLTSSSKKGKARLSPRSVGVISPYRKQVEKIRHCI 844
Query: 539 ----KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK-------EVGFLSDRR 587
K LR DD +K+++V +V+ FQG+E+ I+IS VRS+ +GFL + +
Sbjct: 845 TKLDKELRGLDD-IKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPK 903
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEY 628
R NVAVTRA+ +V + + D K +E+ +E+ Y
Sbjct: 904 RFNVAVTRAKALLIVVGNPLLLGHDPDWKAFLEFCKENGGY 944
Score = 53 (23.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 25/93 (26%), Positives = 40/93 (43%)
Query: 171 LIPVLF--GEQKPTVLKKDIAFKPFNSNLDHS--QKDAISKALSSKN---VFMLHXXXXX 223
L P+LF + +L D+ K ++ +L+ + Q A+ + +++
Sbjct: 469 LWPMLFPVASRGVPLLPSDVKLKLYDRSLESNPEQLQAMKHIVMGTTRPAPYIIFGPPGT 528
Query: 224 XXXXXVVEIILQEVKRGSK--ILACAASNIAVD 254
+VE I Q VK K ILACA SN D
Sbjct: 529 GKTVTLVEAIKQVVKHLPKAHILACAPSNSGAD 561
>WB|WBGene00019529 [details] [associations]
symbol:K08D10.5 species:6239 "Caenorhabditis elegans"
[GO:0004386 "helicase activity" evidence=IEA] eggNOG:COG1112
EMBL:FO081596 GeneTree:ENSGT00530000065249 PIR:T29386
RefSeq:NP_500503.1 UniGene:Cel.27256 ProteinModelPortal:Q21321
SMR:Q21321 PaxDb:Q21321 EnsemblMetazoa:K08D10.5 GeneID:187150
KEGG:cel:CELE_K08D10.5 UCSC:K08D10.5 CTD:187150 WormBase:K08D10.5
InParanoid:Q21321 OMA:KEINIFR NextBio:934280 Uniprot:Q21321
Length = 602
Score = 156 (60.0 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 68/240 (28%), Positives = 115/240 (47%)
Query: 370 FDLVIIDEAAQ-ALEIACWIA-LLKGSRCILAGDHLQLPP-TVQSVEAEKK--GLGRTLF 424
FD+ IDEA+Q AL + +A LL +R IL GD QLPP T ++ AE K +G L
Sbjct: 315 FDITFIDEASQLALYVLGSLATLLPKTRIILVGDMHQLPPYTEDALPAELKRAAVGEPL- 373
Query: 425 ERLADLYGDEVTSM-LTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLL--- 480
LA + G +SM LT +R + I + Y + + + V R E L
Sbjct: 374 -TLA-VKGRRWSSMHLTRVHRCPKMITDLLGAVFYGNTLTSTRKAVNRVPILEAMELPSH 431
Query: 481 --LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHA-KRLIQSGVHASDIGIITPYAAQVVL 537
+ + + + + S NE + + A KR + + ++ Y AQ
Sbjct: 432 HPFVFVNYISQQTQVGKSFSNENEARYALQLVTALKRHAREQNTTVSVAVLNFYGAQYSY 491
Query: 538 LKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
+ + ++D + V+T+DG QG+E + I+ + RS+ ++ FL + R+NVA++R++
Sbjct: 492 VYSI-AED----GVRVNTIDGCQGQEYDVSIVLLTRSDPYEKSKFLVNPNRINVALSRSK 546
>UNIPROTKB|O60306 [details] [associations]
symbol:AQR "Intron-binding protein aquarius" species:9606
"Homo sapiens" [GO:0097157 "pre-mRNA intronic binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0000398 EMBL:AB011132 EMBL:EF553519
EMBL:BC036913 EMBL:BC070379 EMBL:BC108262 EMBL:BC127111
EMBL:BC127112 IPI:IPI00796835 PIR:T00333 RefSeq:NP_055506.1
UniGene:Hs.510958 ProteinModelPortal:O60306 SMR:O60306
IntAct:O60306 STRING:O60306 PhosphoSite:O60306 PaxDb:O60306
PRIDE:O60306 Ensembl:ENST00000156471 GeneID:9716 KEGG:hsa:9716
UCSC:uc001ziv.3 CTD:9716 GeneCards:GC15M035147 HGNC:HGNC:29513
MIM:610548 neXtProt:NX_O60306 PharmGKB:PA134869224 eggNOG:COG1112
HOGENOM:HOG000170551 HOVERGEN:HBG080430 InParanoid:O60306 KO:K12874
OMA:RTKAVGH OrthoDB:EOG4ZPDTF ChiTaRS:AQR GenomeRNAi:9716
NextBio:36525 Bgee:O60306 CleanEx:HS_AQR Genevestigator:O60306
GermOnline:ENSG00000021776 GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 Uniprot:O60306
Length = 1485
Score = 174 (66.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 64/214 (29%), Positives = 105/214 (49%)
Query: 395 RCILAGDHLQLPPTVQSVEAEK-KGLGRTLFERLADLYGDEVTSMLTVQYRMHE---HIM 450
R I+ GDH QLPP ++++ +K + ++LF R + V L Q R ++
Sbjct: 1090 RWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVD--LDAQGRARASLCNLY 1147
Query: 451 NWSSKQLYN-SKIKAHPSGVKRTSSTEPTLLLIDIAGCD-MEEKKDEEDSTMNEGEAEVA 508
NW K L N ++ P + LI++ + E + N GEAE
Sbjct: 1148 NWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAEYV 1207
Query: 509 MAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL---RSKDDKL--KNMEVSTVDGFQGRE 563
+A + G A I I+T Y Q L++ + R ++ L + +V+TVD FQG++
Sbjct: 1208 VALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQ 1267
Query: 564 KEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
+ I++S+VR+ + VG L D RR+ VA++RAR
Sbjct: 1268 NDYILLSLVRTRA---VGHLRDVRRLVVAMSRAR 1298
Score = 37 (18.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 309 NGKLLKTKDKNTRREIQKELRTLSKE 334
+GK K KD + E +E +TL E
Sbjct: 755 SGKGKKRKDADVEDEDTEEAKTLIVE 780
>FB|FBgn0051368 [details] [associations]
symbol:CG31368 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA;IC]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 EMBL:AE014297 GO:GO:0016787
GO:GO:0071011 GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 RefSeq:NP_996198.2 UniGene:Dm.10009
ProteinModelPortal:Q7KSN8 SMR:Q7KSN8 PaxDb:Q7KSN8
EnsemblMetazoa:FBtr0301042 GeneID:41437 KEGG:dme:Dmel_CG31368
UCSC:CG31368-RB FlyBase:FBgn0051368 InParanoid:Q7KSN8
OrthoDB:EOG43XSJ9 PhylomeDB:Q7KSN8 GenomeRNAi:41437 NextBio:823855
ArrayExpress:Q7KSN8 Bgee:Q7KSN8 Uniprot:Q7KSN8
Length = 1486
Score = 160 (61.4 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 65/216 (30%), Positives = 109/216 (50%)
Query: 395 RCILAGDHLQLPPTVQSVEAEK-KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN-- 451
R I+ GDH QLPP ++++ +K + ++LF RL L V L Q R I +
Sbjct: 1106 RWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRLVRLGVPTVD--LDGQGRARASICSLY 1163
Query: 452 -WSSKQLYNSKIKAHPSGVKRTSST---EPTLLLI-DIAGCDMEEKKDEEDSTMNEGEAE 506
W K+L + + K+ + + L+ + D G E + E E
Sbjct: 1164 KWRYKKLEDLQHIFERDEYKQANPGFVHDYQLINVEDFKGVGESEPNPYFYQNLAEAEYI 1223
Query: 507 VAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK-ILRSK--DDKLKNM--EVSTVDGFQG 561
VA+ RL+ G A+ I I+T Y Q L++ ++ ++ ++ L +++TVD +QG
Sbjct: 1224 VAVYMYMRLL--GYPAAKISILTTYNGQKHLIRDVINARCGNNPLIGWPHKITTVDKYQG 1281
Query: 562 REKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
++ + I+IS+VR+ K VG L D RR+ VA++RAR
Sbjct: 1282 QQNDYILISLVRT---KAVGHLRDVRRLVVAMSRAR 1314
>WB|WBGene00010989 [details] [associations]
symbol:R03D7.2 species:6239 "Caenorhabditis elegans"
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
GO:GO:0006974 EMBL:Z46828 PIR:T23869 RefSeq:NP_496354.1
ProteinModelPortal:Q09594 SMR:Q09594 EnsemblMetazoa:R03D7.2
GeneID:174682 KEGG:cel:CELE_R03D7.2 UCSC:R03D7.2 CTD:174682
WormBase:R03D7.2 eggNOG:KOG1801 GeneTree:ENSGT00530000065249
InParanoid:Q09594 NextBio:885046 Uniprot:Q09594
Length = 542
Score = 149 (57.5 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 71/245 (28%), Positives = 115/245 (46%)
Query: 370 FDLVIIDEAAQ-ALEIACWIA-LLKGSRCILAGDHLQLPPTVQSV---EAEKKGLGRTLF 424
FD+ IDEA+Q AL + +A +L SR IL GD QLPP ++ E ++ +G L
Sbjct: 216 FDITFIDEASQLALYVLGSLATMLPKSRMILVGDMHQLPPYMEEALPAELKRAAIGEPL- 274
Query: 425 ERLADLYGDEVTSM-LTVQYRMHEHIMNWSSKQLYNSKIKAHPSGV------KRTS--ST 475
LA + G SM LT +R + I Y + + + GV K S
Sbjct: 275 -TLA-VKGRRWPSMHLTRVHRCPKMITEVLGDLFYGNTLTSSKPGVTDIPVLKAMGLPSR 332
Query: 476 EPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD---IGIITPYA 532
P ++ ++ K S NEGEA A+ + L + A+ I+ Y
Sbjct: 333 HP-MVFVNYTSPQTAVGK----SFSNEGEARYALQLVEALTRYASTANKKITAAILNFYG 387
Query: 533 AQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVA 592
AQ + + ++D+ + V+T+DG QG+E + I+ + RS+ + FL + R+NVA
Sbjct: 388 AQYSYVYSM-AEDE----VTVNTIDGCQGQEYDVTIVLLTRSDPYERSKFLVNANRINVA 442
Query: 593 VTRAR 597
++R +
Sbjct: 443 LSRPK 447
>ZFIN|ZDB-GENE-050508-3 [details] [associations]
symbol:zgc:113057 "zgc:113057" species:7955 "Danio
rerio" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026855 ZFIN:ZDB-GENE-050508-3
GO:GO:0004386 eggNOG:COG1112 PANTHER:PTHR10887:SF16 IPI:IPI00492493
EMBL:BC094297 RefSeq:NP_001018332.1 UniGene:Dr.115608
ProteinModelPortal:Q52KK8 GeneID:552926 KEGG:dre:552926
HOGENOM:HOG000007768 InParanoid:Q52KK8 NextBio:20879878
Uniprot:Q52KK8
Length = 231
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 40/122 (32%), Positives = 66/122 (54%)
Query: 517 QSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNS 576
QSGV I I+TPY AQV +K+ K + ++N+ V TV QG E +I+S VRS S
Sbjct: 67 QSGVSPEHIAILTPYNAQVSEIKMTLEKKN-VRNVTVCTVMKSQGSEWPYVIVSTVRSCS 125
Query: 577 K----------------KEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
K +GF++D ++NVA+TRA+ C++ +++ + RL++
Sbjct: 126 TSDIQAYRVRPHKAWLGKRLGFVTDANQVNVAITRAQDGLCILGNSDLLRCCELWDRLLD 185
Query: 621 YF 622
++
Sbjct: 186 HY 187
>UNIPROTKB|F1SRZ7 [details] [associations]
symbol:F1SRZ7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IEA] InterPro:IPR024860
GO:GO:0005681 GO:GO:0000398 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467 EMBL:CU633172
Ensembl:ENSSSCT00000005301 Uniprot:F1SRZ7
Length = 1206
Score = 138 (53.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 53/193 (27%), Positives = 90/193 (46%)
Query: 395 RCILAGDHLQLPPTVQSVEAEK-KGLGRTLFERLADLYGDEVTSMLTVQYRMHE---HIM 450
R I+ GDH QLPP ++++ +K + ++LF R + V L Q R ++
Sbjct: 1007 RWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVD--LDAQGRARASLCNLY 1064
Query: 451 NWSSKQLYN-SKIKAHPSGVKRTSSTEPTLLLIDIAGCD-MEEKKDEEDSTMNEGEAEVA 508
NW K L N ++ P + LI++ + E + N GEAE
Sbjct: 1065 NWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAEYV 1124
Query: 509 MAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL---RSKDDKL--KNMEVSTVDGFQGRE 563
+A + G A I I+T Y Q L++ + R + L + +V+TVD FQG++
Sbjct: 1125 VALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQ 1184
Query: 564 KEAIIISMVRSNS 576
+ I++S+VR+ +
Sbjct: 1185 NDYILLSLVRTRA 1197
Score = 137 (53.3 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 58/213 (27%), Positives = 94/213 (44%)
Query: 346 VIKNADVVLTTLTGAVSRKLD----NTSFDLVIIDEAAQALEIACWIALL-----KG--- 393
++K A ++ T T A ++ D +D ++++EAAQ LEI +I LL G
Sbjct: 945 LVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSR 1004
Query: 394 -SRCILAGDHLQLPPTVQSVEAEK-KGLGRTLFERLADLYGDEVTSMLTVQYRMHE---H 448
R I+ GDH QLPP ++++ +K + ++LF R + V L Q R +
Sbjct: 1005 LKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVD--LDAQGRARASLCN 1062
Query: 449 IMNWSSKQLYN-SKIKAHPSGVKRTSSTEPTLLLIDIAGCD-MEEKKDEEDSTMNEGEAE 506
+ NW K L N ++ P + LI++ + E + N GEAE
Sbjct: 1063 LYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAE 1122
Query: 507 VAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK 539
+A + G A I I+T Y Q L++
Sbjct: 1123 YVVALFMYMCLLGYPADKISILTTYNGQKHLIR 1155
>UNIPROTKB|H3BRR1 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:9606
"Homo sapiens" [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IEA] InterPro:IPR026853 GO:GO:0043141
EMBL:AP000808 HGNC:HGNC:5542 PANTHER:PTHR10887:SF23
ProteinModelPortal:H3BRR1 Ensembl:ENST00000545146 Bgee:H3BRR1
Uniprot:H3BRR1
Length = 91
Score = 97 (39.2 bits), Expect = 0.00056, P = 0.00056
Identities = 26/90 (28%), Positives = 50/90 (55%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK-GDV--LPAHKFGTHDVVVL 97
+ L+ F+ + G LP++ F T V VL
Sbjct: 62 RLLVTFEPRRYGSAAALPSNSF-TSGVCVL 90
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.356 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 637 613 0.00088 120 3 11 23 0.43 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 172
No. of states in DFA: 608 (65 KB)
Total size of DFA: 274 KB (2146 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 57.20u 0.11s 57.31t Elapsed: 00:00:03
Total cpu time: 57.28u 0.11s 57.39t Elapsed: 00:00:03
Start: Thu May 9 22:21:18 2013 End: Thu May 9 22:21:21 2013
WARNINGS ISSUED: 1