BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006652
(637 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224090282|ref|XP_002308965.1| predicted protein [Populus trichocarpa]
gi|222854941|gb|EEE92488.1| predicted protein [Populus trichocarpa]
Length = 647
Score = 1182 bits (3057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 573/647 (88%), Positives = 610/647 (94%), Gaps = 10/647 (1%)
Query: 1 MEGRKTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLK 60
ME KTK+K +A+SLQEF+S+ +PL+DLEKE+EISASI SGA RNLD+AQKKGSTILNLK
Sbjct: 1 METEKTKKKAAALSLQEFISITSPLLDLEKESEISASIGSGALRNLDSAQKKGSTILNLK 60
Query: 61 CVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS 120
CVDAQTGLMGKTLLEFQS KGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS
Sbjct: 61 CVDAQTGLMGKTLLEFQSNKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS 120
Query: 121 SITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQK 180
SITVAFDDIP+EGLNSPLRLEK+ANEVTYRRMKDALIQLSKGV GPAA LIPVLFGE++
Sbjct: 121 SITVAFDDIPDEGLNSPLRLEKVANEVTYRRMKDALIQLSKGVHRGPAADLIPVLFGERQ 180
Query: 181 PTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG 240
PT+ KKD+ F P NS+LDHSQKDAISKALSSKNVF+LHGPPGTGKTTTVVEIILQEVKRG
Sbjct: 181 PTMSKKDVTFTPINSHLDHSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRG 240
Query: 241 SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
SKILACAASNIAVDNIVERLVPHRV+LVRLGHPARLLPQVL+SALDAQVLRGDNS+LA+D
Sbjct: 241 SKILACAASNIAVDNIVERLVPHRVKLVRLGHPARLLPQVLDSALDAQVLRGDNSALAND 300
Query: 301 IRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA 360
IRKEMKALNGKLLKTKDK+TRR+IQKELRTLSKEERKRQQLAV DVIKNADVVLTTLTGA
Sbjct: 301 IRKEMKALNGKLLKTKDKSTRRDIQKELRTLSKEERKRQQLAVIDVIKNADVVLTTLTGA 360
Query: 361 VSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLG 420
S KL+ TSFDLVIIDEAAQALEI CW+ALLKGSRCILAGDHLQLPPT+QSVEAEKKGLG
Sbjct: 361 FSHKLNTTSFDLVIIDEAAQALEITCWLALLKGSRCILAGDHLQLPPTIQSVEAEKKGLG 420
Query: 421 RTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVK 470
RTLFERL DLYGDEVTSMLTVQYRMHE IMNWSSK+LYNSKIKAHPS GVK
Sbjct: 421 RTLFERLTDLYGDEVTSMLTVQYRMHELIMNWSSKELYNSKIKAHPSVAAHMLFDLEGVK 480
Query: 471 RTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITP 530
R+SSTEPTLLL+DIAGCDMEEKKDEEDSTMNEGEAEVA+AHAKRL+QSGV ASDIGIITP
Sbjct: 481 RSSSTEPTLLLVDIAGCDMEEKKDEEDSTMNEGEAEVAVAHAKRLVQSGVQASDIGIITP 540
Query: 531 YAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
YAAQVVLL+IL++ DDKLK+ME+STVDGFQGREKEAIIISMVRSNSKKEVGFLSD RRMN
Sbjct: 541 YAAQVVLLRILKNNDDKLKDMEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMN 600
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
VAVTRARRQCCLVCDTETVS DGFLKRLIE+FEEH EYLS SEYLNE
Sbjct: 601 VAVTRARRQCCLVCDTETVSGDGFLKRLIEHFEEHGEYLSASEYLNE 647
>gi|255571556|ref|XP_002526724.1| DNA-binding protein smubp-2, putative [Ricinus communis]
gi|223533913|gb|EEF35638.1| DNA-binding protein smubp-2, putative [Ricinus communis]
Length = 644
Score = 1150 bits (2975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/647 (87%), Positives = 613/647 (94%), Gaps = 13/647 (2%)
Query: 1 MEGRKTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLK 60
ME KTK+K +SLQEFVS+ +PL+DLEKEAEISASI+SG SRNLD AQK+GSTILNLK
Sbjct: 1 MEKDKTKKK---LSLQEFVSITSPLLDLEKEAEISASISSGTSRNLDNAQKRGSTILNLK 57
Query: 61 CVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS 120
CVDAQTGLMGKTLLEFQS KGDVLP+H+F THDVVVLKPNKADLGSPALGQGVVYRLKDS
Sbjct: 58 CVDAQTGLMGKTLLEFQSNKGDVLPSHRFSTHDVVVLKPNKADLGSPALGQGVVYRLKDS 117
Query: 121 SITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQK 180
SITVAFDDIPEEGLNSPLRLEK+ANEVTYRRM++ALIQLSKGVQ GPAA L+PVLFGE++
Sbjct: 118 SITVAFDDIPEEGLNSPLRLEKVANEVTYRRMREALIQLSKGVQRGPAADLVPVLFGERQ 177
Query: 181 PTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG 240
PT+ KK + F PFNSNLDHSQKDAISKALSSK+VF+LHGPPGTGKTTTVVEIILQEVKRG
Sbjct: 178 PTMSKKGVTFTPFNSNLDHSQKDAISKALSSKDVFLLHGPPGTGKTTTVVEIILQEVKRG 237
Query: 241 SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
+KILACAASNIAVDNIVERLVPHRV+LVRLGHPARLLPQVL+SALDAQVL+GDNSSLA+D
Sbjct: 238 AKILACAASNIAVDNIVERLVPHRVKLVRLGHPARLLPQVLDSALDAQVLKGDNSSLAND 297
Query: 301 IRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA 360
IRKEMKALNGKLLKTKDK+TRR+IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA
Sbjct: 298 IRKEMKALNGKLLKTKDKSTRRDIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA 357
Query: 361 VSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLG 420
+S KLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPT+QSVEAEKKGLG
Sbjct: 358 LSHKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQSVEAEKKGLG 417
Query: 421 RTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVK 470
RTLFERLADLYGDEVTSMLTVQYRMHE IM WSSK+LYNSKIKAHPS GVK
Sbjct: 418 RTLFERLADLYGDEVTSMLTVQYRMHELIMTWSSKELYNSKIKAHPSIAAHMLSDLEGVK 477
Query: 471 RTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITP 530
R+S+TEPTLLLIDIAGCDMEEKKDEE+ST+NEGEA+VA+AHAKRL+++GV ASDIGIITP
Sbjct: 478 RSSATEPTLLLIDIAGCDMEEKKDEEESTLNEGEADVAVAHAKRLVENGVQASDIGIITP 537
Query: 531 YAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
YAAQVVLLKILRS +DKLK++E+STVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN
Sbjct: 538 YAAQVVLLKILRSNEDKLKDVEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 597
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
VAVTRARRQCCLVCDTETV+SDGFLKRLIEYFEEH EYLS +EY NE
Sbjct: 598 VAVTRARRQCCLVCDTETVTSDGFLKRLIEYFEEHGEYLSAAEYCNE 644
>gi|297739693|emb|CBI29875.3| unnamed protein product [Vitis vinifera]
Length = 647
Score = 1148 bits (2970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/647 (86%), Positives = 598/647 (92%), Gaps = 10/647 (1%)
Query: 1 MEGRKTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLK 60
MEG K+ K SA+SLQ+F+S +APLIDLEK S S SG+ RNLDTAQK+GSTILNLK
Sbjct: 1 MEGGKSNRKSSAISLQQFISTIAPLIDLEKAHSHSLSNLSGSLRNLDTAQKRGSTILNLK 60
Query: 61 CVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS 120
CVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS
Sbjct: 61 CVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS 120
Query: 121 SITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQK 180
SITVAFDDIPEEGLNSPLRLEK+ANEVTYRRMKDAL+QLSKGV GP A LIPVLFGE+
Sbjct: 121 SITVAFDDIPEEGLNSPLRLEKVANEVTYRRMKDALVQLSKGVHKGPTADLIPVLFGERP 180
Query: 181 PTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG 240
PTV KKD+ F PFNSNLD SQKDAISKALSSKNVF+LHGPPGTGKTTTVVEIILQEVKRG
Sbjct: 181 PTVSKKDVTFTPFNSNLDRSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRG 240
Query: 241 SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
+KILACAASNIAVDNIVERLVP+RV+LVRLGHPARLLPQVLESALDAQVLRGDN+ LA+D
Sbjct: 241 AKILACAASNIAVDNIVERLVPYRVKLVRLGHPARLLPQVLESALDAQVLRGDNTGLAND 300
Query: 301 IRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA 360
IRKEMKALNGKLLKTKDKNTRR+I+KEL+TLSKEERKRQQLAVTDVIKNA+VVLTTLTGA
Sbjct: 301 IRKEMKALNGKLLKTKDKNTRRDIRKELKTLSKEERKRQQLAVTDVIKNANVVLTTLTGA 360
Query: 361 VSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLG 420
VSRKL+N SFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPT+QSVEAEKKGLG
Sbjct: 361 VSRKLENISFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQSVEAEKKGLG 420
Query: 421 RTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVK 470
RTLFERLADLYGDEV SMLTVQYRMHE IMNWSSK+LYNSKI AHPS VK
Sbjct: 421 RTLFERLADLYGDEVMSMLTVQYRMHELIMNWSSKELYNSKITAHPSVAAHMLSDLEDVK 480
Query: 471 RTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITP 530
++SSTE TLLLID AGCDMEEKKDEEDSTMNEGEAEVA++HAKRL+ SGV ASDIGIITP
Sbjct: 481 KSSSTESTLLLIDTAGCDMEEKKDEEDSTMNEGEAEVAISHAKRLVDSGVQASDIGIITP 540
Query: 531 YAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
YAAQVVLLK++++ DDKLK+ME+STVDGFQGREKEAIIISM RSN KKEVGFLSDRRRMN
Sbjct: 541 YAAQVVLLKMMKNNDDKLKDMEISTVDGFQGREKEAIIISMARSNPKKEVGFLSDRRRMN 600
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
VAVTRARRQCCLVCDTETV+SD FLKRLIEYFEE+ EYLS SEY +E
Sbjct: 601 VAVTRARRQCCLVCDTETVTSDKFLKRLIEYFEENGEYLSASEYGHE 647
>gi|225441756|ref|XP_002277619.1| PREDICTED: DNA-binding protein SMUBP-2-like [Vitis vinifera]
Length = 647
Score = 1147 bits (2966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/647 (87%), Positives = 604/647 (93%), Gaps = 10/647 (1%)
Query: 1 MEGRKTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLK 60
MEG K+ K SA+SLQ+F+S +APLIDLEK+AEIS SI+SG+ RNLDTAQK+GSTILNLK
Sbjct: 1 MEGGKSNRKSSAISLQQFISTIAPLIDLEKDAEISGSISSGSLRNLDTAQKRGSTILNLK 60
Query: 61 CVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS 120
CVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS
Sbjct: 61 CVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS 120
Query: 121 SITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQK 180
SITVAFDDIPEEGLNSPLRLEK+ANEVTYRRMKDAL+QLSKGV GP A LIPVLFGE+
Sbjct: 121 SITVAFDDIPEEGLNSPLRLEKVANEVTYRRMKDALVQLSKGVHKGPTADLIPVLFGERP 180
Query: 181 PTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG 240
PTV KKD+ F PFNSNLD SQKDAISKALSSKNVF+LHGPPGTGKTTTVVEIILQEVKRG
Sbjct: 181 PTVSKKDVTFTPFNSNLDRSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRG 240
Query: 241 SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
+KILACAASNIAVDNIVERLVP+RV+LVRLGHPARLLPQVLESALDAQVLRGDN+ LA+D
Sbjct: 241 AKILACAASNIAVDNIVERLVPYRVKLVRLGHPARLLPQVLESALDAQVLRGDNTGLAND 300
Query: 301 IRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA 360
IRKEMKALNGKLLKTKDKNTRR+I+KEL+TLSKEERKRQQLAVTDVIKNA+VVLTTLTGA
Sbjct: 301 IRKEMKALNGKLLKTKDKNTRRDIRKELKTLSKEERKRQQLAVTDVIKNANVVLTTLTGA 360
Query: 361 VSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLG 420
VSRKL+N SFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPT+QSVEAEKKGLG
Sbjct: 361 VSRKLENISFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQSVEAEKKGLG 420
Query: 421 RTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVK 470
RTLFERLADLYGDEV SMLTVQYRMHE IMNWSSK+LYNSKI AHPS VK
Sbjct: 421 RTLFERLADLYGDEVMSMLTVQYRMHELIMNWSSKELYNSKITAHPSVAAHMLSDLEDVK 480
Query: 471 RTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITP 530
++SSTE TLLLID AGCDMEEKKDEEDSTMNEGEAEVA++HAKRL+ SGV ASDIGIITP
Sbjct: 481 KSSSTESTLLLIDTAGCDMEEKKDEEDSTMNEGEAEVAISHAKRLVDSGVQASDIGIITP 540
Query: 531 YAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
YAAQVVLLK++++ DDKLK+ME+STVDGFQGREKEAIIISM RSN KKEVGFLSDRRRMN
Sbjct: 541 YAAQVVLLKMMKNNDDKLKDMEISTVDGFQGREKEAIIISMARSNPKKEVGFLSDRRRMN 600
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
VAVTRARRQCCLVCDTETV+SD FLKRLIEYFEE+ EYLS SEY +E
Sbjct: 601 VAVTRARRQCCLVCDTETVTSDKFLKRLIEYFEENGEYLSASEYGHE 647
>gi|147846685|emb|CAN80641.1| hypothetical protein VITISV_016912 [Vitis vinifera]
Length = 649
Score = 1144 bits (2959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/649 (86%), Positives = 598/649 (92%), Gaps = 12/649 (1%)
Query: 1 MEGRKTKEKQSAVSLQEFVSVMAPLIDLEKEAEISAS--ITSGASRNLDTAQKKGSTILN 58
MEG K+ K SA+SLQ+F+S +APLIDLEK S S SG+ RNLDTAQK+GSTILN
Sbjct: 1 MEGGKSNRKSSAISLQQFISTIAPLIDLEKAHSHSLSNLCNSGSLRNLDTAQKRGSTILN 60
Query: 59 LKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLK 118
LKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLK
Sbjct: 61 LKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLK 120
Query: 119 DSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGE 178
DSSITVAFDDIPEEGLNSPLRLEK+ANEVTYRRMKDAL+QLSKGV GPAA LIPVLFGE
Sbjct: 121 DSSITVAFDDIPEEGLNSPLRLEKVANEVTYRRMKDALVQLSKGVHKGPAADLIPVLFGE 180
Query: 179 QKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK 238
+ PTV KKD+ F PFNSNLD SQKD ISKALSSKNVF+LHGPPGTGKTTTVVEIILQEVK
Sbjct: 181 RPPTVSKKDVTFTPFNSNLDRSQKDXISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVK 240
Query: 239 RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLA 298
RG+KILACAASNIAVDNIVERLVP+RV+LVRLGHPARLLPQVLESALDAQVLRGDN+ LA
Sbjct: 241 RGAKILACAASNIAVDNIVERLVPYRVKLVRLGHPARLLPQVLESALDAQVLRGDNTGLA 300
Query: 299 SDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLT 358
+DIRKEMKALNGKLLKTKDKNTRR+I+KEL+TLSKEERKRQQLAVTDVIKNA+VVLTTLT
Sbjct: 301 NDIRKEMKALNGKLLKTKDKNTRRDIRKELKTLSKEERKRQQLAVTDVIKNANVVLTTLT 360
Query: 359 GAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKG 418
GAVSRKL+N SFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPT+QSVEAEKKG
Sbjct: 361 GAVSRKLENISFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQSVEAEKKG 420
Query: 419 LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------G 468
LGRTLFERLADLYGDEV SMLTVQYRMHE IMNWSSK+LYNSKI AHPS
Sbjct: 421 LGRTLFERLADLYGDEVMSMLTVQYRMHELIMNWSSKELYNSKITAHPSVAAHMLSDLED 480
Query: 469 VKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
VK++SSTE TLLLID AGCDMEEKKDEEDSTMNEGEAEVA++HAKRL+ SGV ASDIGII
Sbjct: 481 VKKSSSTESTLLLIDTAGCDMEEKKDEEDSTMNEGEAEVAISHAKRLVDSGVQASDIGII 540
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
TPYAAQVVLLK++++ DDKLK+ME+STVDGFQGREKEAIIISM RSN KKEVGFLSDRRR
Sbjct: 541 TPYAAQVVLLKMMKNNDDKLKDMEISTVDGFQGREKEAIIISMARSNPKKEVGFLSDRRR 600
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
MNVAVTRARRQCCLVCDTETV+SD FLKRLIEYFEE+ EYLS SEY +E
Sbjct: 601 MNVAVTRARRQCCLVCDTETVTSDKFLKRLIEYFEENGEYLSASEYGHE 649
>gi|356504807|ref|XP_003521186.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max]
Length = 648
Score = 1144 bits (2959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/645 (84%), Positives = 604/645 (93%), Gaps = 10/645 (1%)
Query: 3 GRKTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCV 62
G +K+K S +SL++F+S+ APL+DLEKEAEIS+SI +GASRNLDTAQK+GSTILNLKCV
Sbjct: 4 GTGSKKKASPLSLEQFISITAPLLDLEKEAEISSSIATGASRNLDTAQKRGSTILNLKCV 63
Query: 63 DAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSI 122
D QTGLMGK+L+EFQSTKGDVLPAHKFGTHDVVVLK NKADLGSPALGQGVVYRLKDSSI
Sbjct: 64 DVQTGLMGKSLIEFQSTKGDVLPAHKFGTHDVVVLKLNKADLGSPALGQGVVYRLKDSSI 123
Query: 123 TVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPT 182
T+AFDDIPE+GLNSPLRLEK+ANEVTYRRMKDALIQLSKGV GPA+ LIPVLFGE+ PT
Sbjct: 124 TIAFDDIPEDGLNSPLRLEKVANEVTYRRMKDALIQLSKGVHKGPASDLIPVLFGERPPT 183
Query: 183 VLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSK 242
V KKD++ PFN NLDHSQK+A+SKALSSKNVF+LHGPPGTGKTTTVVEIILQEVKRGSK
Sbjct: 184 VSKKDVSSTPFNKNLDHSQKEAVSKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSK 243
Query: 243 ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR 302
ILACAASNIAVDNIVERLVPHRV+LVR+GHPARLLPQVL+SALDAQVLRGDNS LA+DIR
Sbjct: 244 ILACAASNIAVDNIVERLVPHRVKLVRVGHPARLLPQVLDSALDAQVLRGDNSGLANDIR 303
Query: 303 KEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS 362
KEMKALNGKLLKTKD+NTR++IQ+ELRTLSKEERKRQQLAVTDV+K+ADV+LTTL GA S
Sbjct: 304 KEMKALNGKLLKTKDRNTRKDIQRELRTLSKEERKRQQLAVTDVLKSADVILTTLIGAFS 363
Query: 363 RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRT 422
+KLD+TSFDLVIIDEAAQALEIACWI +LKGSRCILAGDHLQLPPT+QSVEAEKKGLGRT
Sbjct: 364 KKLDSTSFDLVIIDEAAQALEIACWIPILKGSRCILAGDHLQLPPTIQSVEAEKKGLGRT 423
Query: 423 LFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRT 472
LFERLA++YGDE+TSMLT+QYRMHE IM+WSSK+LYNSKIKAHPS GVKRT
Sbjct: 424 LFERLAEMYGDEITSMLTIQYRMHELIMDWSSKELYNSKIKAHPSVTAHMLYDLEGVKRT 483
Query: 473 SSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYA 532
+STEPTLLLID AGCDMEEKKDEEDST NEGEAEV + HAKRL+QSGV SDIGIITPYA
Sbjct: 484 NSTEPTLLLIDTAGCDMEEKKDEEDSTFNEGEAEVTVTHAKRLVQSGVLPSDIGIITPYA 543
Query: 533 AQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVA 592
AQVVLLK+L++K+D+LK++E+STVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVA
Sbjct: 544 AQVVLLKMLKNKEDQLKDVEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVA 603
Query: 593 VTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
VTR+RRQCCLVCDTETVS DGFLKRLIEYFEEH EYLS SEY NE
Sbjct: 604 VTRSRRQCCLVCDTETVSGDGFLKRLIEYFEEHGEYLSASEYQNE 648
>gi|356570496|ref|XP_003553421.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max]
Length = 648
Score = 1144 bits (2958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/645 (85%), Positives = 603/645 (93%), Gaps = 10/645 (1%)
Query: 3 GRKTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCV 62
G +K+K S +SL++F+S+ APL+DLEKEAEIS+SI +GASRNLDTAQK+GSTILNLKCV
Sbjct: 4 GTGSKKKPSPLSLEQFISITAPLLDLEKEAEISSSIATGASRNLDTAQKRGSTILNLKCV 63
Query: 63 DAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSI 122
D QTGLMGK+L+EFQSTKGDVLPAHKFGTHDVVVLK NKADLGSPALGQGVVYRLKDSSI
Sbjct: 64 DVQTGLMGKSLIEFQSTKGDVLPAHKFGTHDVVVLKLNKADLGSPALGQGVVYRLKDSSI 123
Query: 123 TVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPT 182
TVAFDDIPE+GLNSPLRLEK+ANEVTYRRMKDALIQLSKGV GPA+ LIPVLFGE+ P
Sbjct: 124 TVAFDDIPEDGLNSPLRLEKVANEVTYRRMKDALIQLSKGVHKGPASDLIPVLFGERPPA 183
Query: 183 VLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSK 242
V KKD++F PFN NLDHSQK+A+SKALSSKNVF+LHGPPGTGKTTTVVEIILQEVKRGSK
Sbjct: 184 VSKKDVSFTPFNKNLDHSQKEAVSKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSK 243
Query: 243 ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR 302
ILACAASNIAVDNIVERLVPHRV+LVRLGHPARLLPQVL+SALDAQVLRGDNS LA+DIR
Sbjct: 244 ILACAASNIAVDNIVERLVPHRVKLVRLGHPARLLPQVLDSALDAQVLRGDNSGLANDIR 303
Query: 303 KEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS 362
KEMKALNGKLLKTKD+NTR++IQ+ELRTLSKEERKRQQLAVTDV+K+ADV+LTTL GA S
Sbjct: 304 KEMKALNGKLLKTKDRNTRKDIQRELRTLSKEERKRQQLAVTDVLKSADVILTTLIGAFS 363
Query: 363 RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRT 422
+KLD+TSFDLVIIDEAAQALEIACWI LLKGSRC+LAGDHLQLPPT+QSVEAEKKGLGRT
Sbjct: 364 KKLDSTSFDLVIIDEAAQALEIACWIPLLKGSRCVLAGDHLQLPPTIQSVEAEKKGLGRT 423
Query: 423 LFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRT 472
LFERLA++YGDE+TSMLTVQYRMHE IM+WSSK+LYNSKIKAHPS GVKRT
Sbjct: 424 LFERLAEVYGDEITSMLTVQYRMHELIMDWSSKELYNSKIKAHPSVTAHMLYDLEGVKRT 483
Query: 473 SSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYA 532
+STEPTLLLID AGCDMEEKKDEEDST NEGEAEV +AHAKRL+QSGV SDIGIITPYA
Sbjct: 484 TSTEPTLLLIDTAGCDMEEKKDEEDSTFNEGEAEVTVAHAKRLVQSGVIPSDIGIITPYA 543
Query: 533 AQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVA 592
AQVVLLK+L++K+D+LK++E+STVDGFQGREKEAIIISMVRSNSKKEVGFLSD RRMNVA
Sbjct: 544 AQVVLLKMLKNKEDRLKDVEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNVA 603
Query: 593 VTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
VTR+RRQCCLV DTETVS DGFLKRLIEYFEEH EYLS SEY NE
Sbjct: 604 VTRSRRQCCLVSDTETVSGDGFLKRLIEYFEEHGEYLSASEYQNE 648
>gi|449437623|ref|XP_004136591.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
gi|449501878|ref|XP_004161482.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
Length = 647
Score = 1132 bits (2927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/647 (85%), Positives = 604/647 (93%), Gaps = 10/647 (1%)
Query: 1 MEGRKTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLK 60
MEG KTK+K + ++L++FVS+ APL+D+EK+AEI+ASI+SGA+RNL+TAQKKGSTILNLK
Sbjct: 1 MEGSKTKKKSAPITLEQFVSITAPLLDMEKDAEIAASISSGATRNLETAQKKGSTILNLK 60
Query: 61 CVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS 120
C+DA +GLMGKTLLEFQS KGDVLP HKF THDVVVLKPN+ADLGSP+LGQGVVYRLKDS
Sbjct: 61 CIDASSGLMGKTLLEFQSNKGDVLPPHKFSTHDVVVLKPNRADLGSPSLGQGVVYRLKDS 120
Query: 121 SITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQK 180
SITVAFDDIPEEGL SPLRLEK+ANEVTYRRMKDALIQLSKGV GPAA LIPVLFGE++
Sbjct: 121 SITVAFDDIPEEGLASPLRLEKVANEVTYRRMKDALIQLSKGVHRGPAADLIPVLFGERQ 180
Query: 181 PTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG 240
P++ K D+ FKPFNSNLDHSQKDAISKALS KNVF+LHGPPGTGKTTTVVEIILQEVKRG
Sbjct: 181 PSMSKTDVKFKPFNSNLDHSQKDAISKALSGKNVFLLHGPPGTGKTTTVVEIILQEVKRG 240
Query: 241 SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
SKILACAASNIAVDNIVERLVPHRV+LVR+GHPARLLPQVLESALDAQVLRGDNSSLA+D
Sbjct: 241 SKILACAASNIAVDNIVERLVPHRVKLVRVGHPARLLPQVLESALDAQVLRGDNSSLAND 300
Query: 301 IRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA 360
IRKEMKALNGKLLK KD+NTRREIQKELRTLSKEER RQQLAVTDVIKN+DVVLTTLTGA
Sbjct: 301 IRKEMKALNGKLLKAKDRNTRREIQKELRTLSKEERNRQQLAVTDVIKNSDVVLTTLTGA 360
Query: 361 VSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLG 420
SRKL+N SFDLVIIDEAAQALEIACWIALLK SRCILAGDHLQLPPT+QSVEAEKKGLG
Sbjct: 361 FSRKLNNISFDLVIIDEAAQALEIACWIALLKASRCILAGDHLQLPPTIQSVEAEKKGLG 420
Query: 421 RTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVK 470
RTLFERLA++YG+EVTSMLTVQYRMHE IM+WSSK+LY+SKIKAH S VK
Sbjct: 421 RTLFERLAEMYGNEVTSMLTVQYRMHELIMDWSSKELYDSKIKAHSSVAAHMLYDLEDVK 480
Query: 471 RTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITP 530
+TSSTEPTLLLIDIAGC+MEE+KDEE+ST+NEGEAEVAMAHAKRLIQSGV SDIGIITP
Sbjct: 481 KTSSTEPTLLLIDIAGCEMEERKDEEESTLNEGEAEVAMAHAKRLIQSGVQPSDIGIITP 540
Query: 531 YAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
YAAQVVLLK LRS DDKLK++E+STVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN
Sbjct: 541 YAAQVVLLKTLRSNDDKLKDIEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 600
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
VAVTRARRQCCLVCDT+TV+ D FLKRLIEYFEE+ EYLS SEY NE
Sbjct: 601 VAVTRARRQCCLVCDTDTVTYDAFLKRLIEYFEENGEYLSASEYQNE 647
>gi|357509763|ref|XP_003625170.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
gi|355500185|gb|AES81388.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
Length = 645
Score = 1123 bits (2904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/641 (84%), Positives = 592/641 (92%), Gaps = 10/641 (1%)
Query: 7 KEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQT 66
K+ S +SL +F+S+ PL+DLEK+AEIS+SI +GASRNLDTAQK+GSTILNLKCVD QT
Sbjct: 5 KKASSPLSLDQFISITTPLLDLEKDAEISSSIATGASRNLDTAQKRGSTILNLKCVDVQT 64
Query: 67 GLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF 126
GLMGK+L+E QSTK DVLPAHKFGTHDVVVLK NKADLGSPALGQGVVYRLKDSSITVAF
Sbjct: 65 GLMGKSLIELQSTKADVLPAHKFGTHDVVVLKLNKADLGSPALGQGVVYRLKDSSITVAF 124
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
DDIPE+GLNSPLRLEK+ANEVTY RMKDALIQLSKGV GPA+ LIPVLFGE++PTV KK
Sbjct: 125 DDIPEDGLNSPLRLEKVANEVTYHRMKDALIQLSKGVHKGPASDLIPVLFGERQPTVSKK 184
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILAC 246
D+ F N NLD+SQKDAISKALSSKNVF+LHGPPGTGKTTTVVEIILQEVKRGSKILAC
Sbjct: 185 DVVFTSINKNLDYSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILAC 244
Query: 247 AASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
AASNIAVDNIVERLVPHRV+LVR+GHPARLLPQV++SALDAQVLRGDNS LA+DIRKEMK
Sbjct: 245 AASNIAVDNIVERLVPHRVKLVRIGHPARLLPQVVDSALDAQVLRGDNSGLANDIRKEMK 304
Query: 307 ALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLD 366
LNGKLLKTK+KNTRREIQKELRTLS+EERKRQQLAVTDVIK +DV+LTTL GA S+KL
Sbjct: 305 VLNGKLLKTKEKNTRREIQKELRTLSREERKRQQLAVTDVIKTSDVILTTLIGASSKKLG 364
Query: 367 NTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFER 426
NTSFDLVIIDEAAQALE+ACWI LLKG+RCILAGDHLQLPPT+QSVEAEKKGLGRTLFER
Sbjct: 365 NTSFDLVIIDEAAQALEVACWIPLLKGTRCILAGDHLQLPPTIQSVEAEKKGLGRTLFER 424
Query: 427 LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTE 476
LA+LYGDEVTSMLTVQYRMH+ IM+WSSK+LYNSK+KAH GVK+TSSTE
Sbjct: 425 LAELYGDEVTSMLTVQYRMHQLIMDWSSKELYNSKVKAHACVASHMLYDLEGVKKTSSTE 484
Query: 477 PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVV 536
PTLLLID AGCDMEEKKDEEDST+NEGE+EVAMAHAKRL+QSGV SDIGIITPYAAQVV
Sbjct: 485 PTLLLIDTAGCDMEEKKDEEDSTLNEGESEVAMAHAKRLVQSGVLPSDIGIITPYAAQVV 544
Query: 537 LLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
LLK+L++K++ LK++E+STVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA
Sbjct: 545 LLKMLKNKENSLKDIEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 604
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
RRQCC+VCDTETVSSDGFLKRLIEYFEEH EY S SEY NE
Sbjct: 605 RRQCCIVCDTETVSSDGFLKRLIEYFEEHGEYQSASEYQNE 645
>gi|18395518|ref|NP_565299.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|15027927|gb|AAK76494.1| putative helicase [Arabidopsis thaliana]
gi|20197343|gb|AAM15033.1| putative helicase [Arabidopsis thaliana]
gi|20197741|gb|AAD17447.2| putative helicase [Arabidopsis thaliana]
gi|20259169|gb|AAM14300.1| putative helicase [Arabidopsis thaliana]
gi|330250587|gb|AEC05681.1| putative DNA-binding protein [Arabidopsis thaliana]
Length = 639
Score = 1067 bits (2760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/635 (82%), Positives = 580/635 (91%), Gaps = 11/635 (1%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
+SL+ FVS MAPLID+EKEAEIS S+TSGASRN++TAQKKG+TILNLKCVD QTGLMGK+
Sbjct: 5 MSLEAFVSTMAPLIDMEKEAEISMSLTSGASRNIETAQKKGTTILNLKCVDVQTGLMGKS 64
Query: 73 LLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEE 132
L+EFQS KGDVLPAHKFG HDVVVLK NK+DLGS L QGVVYRLKDSSITV FD++PEE
Sbjct: 65 LIEFQSNKGDVLPAHKFGNHDVVVLKLNKSDLGSSPLAQGVVYRLKDSSITVVFDEVPEE 124
Query: 133 GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDI-AFK 191
GLN+ LRLEKLANEVTYRRMKD LIQLSKGV GPA+ L+PVLFGE++P+V KKD+ +F
Sbjct: 125 GLNTSLRLEKLANEVTYRRMKDTLIQLSKGVLRGPASDLVPVLFGERQPSVSKKDVKSFT 184
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNI 251
PFN NLD SQKDAI+KALSSK+VF+LHGPPGTGKTTTVVEI+LQEVKRGSKILACAASNI
Sbjct: 185 PFNKNLDQSQKDAITKALSSKDVFLLHGPPGTGKTTTVVEIVLQEVKRGSKILACAASNI 244
Query: 252 AVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGK 311
AVDNIVERLVPH+V+LVR+GHPARLLPQVL+SALDAQVL+GDNS LA+DIRKEMKALNGK
Sbjct: 245 AVDNIVERLVPHKVKLVRVGHPARLLPQVLDSALDAQVLKGDNSGLANDIRKEMKALNGK 304
Query: 312 LLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
LLK KDKNTRR IQKELRTL KEERKRQQLAV+DVIKNADV+LTTLTGA++RKLDN +FD
Sbjct: 305 LLKAKDKNTRRLIQKELRTLGKEERKRQQLAVSDVIKNADVILTTLTGALTRKLDNRTFD 364
Query: 372 LVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
LVIIDE AQALE+ACWIALLKGSRCILAGDHLQLPPT+QS EAE+KGLGRTLFERLADLY
Sbjct: 365 LVIIDEGAQALEVACWIALLKGSRCILAGDHLQLPPTIQSAEAERKGLGRTLFERLADLY 424
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLL 481
GDE+ SMLTVQYRMHE IMNWSSK+LY++KI AH S V ++SSTE TLLL
Sbjct: 425 GDEIKSMLTVQYRMHELIMNWSSKELYDNKITAHSSVASHMLFDLENVTKSSSTEATLLL 484
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL 541
+D AGCDMEEKKDEE+ST NEGEAEVAMAHAKRL++SGV SDIGIITPYAAQV+LL+IL
Sbjct: 485 VDTAGCDMEEKKDEEESTYNEGEAEVAMAHAKRLMESGVQPSDIGIITPYAAQVMLLRIL 544
Query: 542 RSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
R K++KLK+ME+STVDGFQGREKEAIIISMVRSNSKKEVGFL D+RRMNVAVTR+RRQCC
Sbjct: 545 RGKEEKLKDMEISTVDGFQGREKEAIIISMVRSNSKKEVGFLKDQRRMNVAVTRSRRQCC 604
Query: 602 LVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLN 636
+VCDTETVSSD FLKR+IEYFEEH EYLS SEY N
Sbjct: 605 IVCDTETVSSDAFLKRMIEYFEEHGEYLSASEYTN 639
>gi|11191231|emb|CAC16347.1| putative helicase [Arabidopsis thaliana]
Length = 635
Score = 1065 bits (2753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/635 (82%), Positives = 579/635 (91%), Gaps = 11/635 (1%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
+SL+ FVS MAPLID+EKEAEIS S+TSGASRN++TAQKKG+TILNLKCVD QTGLMGK+
Sbjct: 1 MSLEAFVSTMAPLIDMEKEAEISMSLTSGASRNIETAQKKGTTILNLKCVDVQTGLMGKS 60
Query: 73 LLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEE 132
L+EFQS KGD LPAHKFG HDVVVLK NK+DLGS L QGVVYRLKDSSITV FD++PEE
Sbjct: 61 LIEFQSNKGDALPAHKFGNHDVVVLKLNKSDLGSSPLAQGVVYRLKDSSITVVFDEVPEE 120
Query: 133 GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDI-AFK 191
GLN+ LRLEKLANEVTYRRMKD LIQLSKGV GPA+ L+PVLFGE++P+V KKD+ +F
Sbjct: 121 GLNTSLRLEKLANEVTYRRMKDTLIQLSKGVLRGPASDLVPVLFGERQPSVSKKDVKSFT 180
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNI 251
PFN NLD SQKDAI+KALSSK+VF+LHGPPGTGKTTTVVEI+LQEVKRGSKILACAASNI
Sbjct: 181 PFNKNLDQSQKDAITKALSSKDVFLLHGPPGTGKTTTVVEIVLQEVKRGSKILACAASNI 240
Query: 252 AVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGK 311
AVDNIVERLVPH+V+LVR+GHPARLLPQVL+SALDAQVL+GDNS LA+DIRKEMKALNGK
Sbjct: 241 AVDNIVERLVPHKVKLVRVGHPARLLPQVLDSALDAQVLKGDNSGLANDIRKEMKALNGK 300
Query: 312 LLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
LLK KDKNTRR IQKELRTL KEERKRQQLAV+DVIKNADV+LTTLTGA++RKLDN +FD
Sbjct: 301 LLKAKDKNTRRLIQKELRTLGKEERKRQQLAVSDVIKNADVILTTLTGALTRKLDNRTFD 360
Query: 372 LVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
LVIIDE AQALE+ACWIALLKGSRCILAGDHLQLPPT+QS EAE+KGLGRTLFERLADLY
Sbjct: 361 LVIIDEGAQALEVACWIALLKGSRCILAGDHLQLPPTIQSAEAERKGLGRTLFERLADLY 420
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLL 481
GDE+ SMLTVQYRMHE IMNWSSK+LY++KI AH S V ++SSTE TLLL
Sbjct: 421 GDEIKSMLTVQYRMHELIMNWSSKELYDNKITAHSSVASHMLFDLENVTKSSSTEATLLL 480
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL 541
+D AGCDMEEKKDEE+ST NEGEAEVAMAHAKRL++SGV SDIGIITPYAAQV+LL+IL
Sbjct: 481 VDTAGCDMEEKKDEEESTYNEGEAEVAMAHAKRLMESGVQPSDIGIITPYAAQVMLLRIL 540
Query: 542 RSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
R K++KLK+ME+STVDGFQGREKEAIIISMVRSNSKKEVGFL D+RRMNVAVTR+RRQCC
Sbjct: 541 RGKEEKLKDMEISTVDGFQGREKEAIIISMVRSNSKKEVGFLKDQRRMNVAVTRSRRQCC 600
Query: 602 LVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLN 636
+VCDTETVSSD FLKR+IEYFEEH EYLS SEY N
Sbjct: 601 IVCDTETVSSDAFLKRMIEYFEEHGEYLSASEYTN 635
>gi|115453945|ref|NP_001050573.1| Os03g0586900 [Oryza sativa Japonica Group]
gi|50399951|gb|AAT76339.1| putative DNA helicase [Oryza sativa Japonica Group]
gi|108709563|gb|ABF97358.1| DNA helicase family protein, expressed [Oryza sativa Japonica
Group]
gi|113549044|dbj|BAF12487.1| Os03g0586900 [Oryza sativa Japonica Group]
gi|215704640|dbj|BAG94268.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193224|gb|EEC75651.1| hypothetical protein OsI_12407 [Oryza sativa Indica Group]
gi|222625290|gb|EEE59422.1| hypothetical protein OsJ_11580 [Oryza sativa Japonica Group]
Length = 651
Score = 1032 bits (2669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/632 (78%), Positives = 552/632 (87%), Gaps = 14/632 (2%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
VSLQEFVS MAPLIDLEK AEISA + + T +++G + NLKC DAQTGLMGKT
Sbjct: 22 VSLQEFVSSMAPLIDLEKAAEISAESATSSK----TLERRGCVMANLKCTDAQTGLMGKT 77
Query: 73 LLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEE 132
LLEFQ KGDVLP HKFGTHDVV LKPNKAD GS ALGQGVVYRLKDSSITVAFDDIPE+
Sbjct: 78 LLEFQPNKGDVLPPHKFGTHDVVALKPNKADAGSAALGQGVVYRLKDSSITVAFDDIPED 137
Query: 133 GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKP 192
GLNSPLRLEKLANEVTYRRMKDAL+QLSKG+Q GP+A LIPVLFGE P K F P
Sbjct: 138 GLNSPLRLEKLANEVTYRRMKDALVQLSKGIQTGPSANLIPVLFGENPPMSSKDVAKFSP 197
Query: 193 FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIA 252
FN NLD SQKDAISKAL S++VF+LHGPPGTGKTTT++EIILQEVKRGSKILACAASNIA
Sbjct: 198 FNKNLDESQKDAISKALRSRDVFLLHGPPGTGKTTTIIEIILQEVKRGSKILACAASNIA 257
Query: 253 VDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKL 312
VDNIVERL +R +LVRLGHPARLLPQVL+SALDAQVLR DNSSLA DIRKEMK LN KL
Sbjct: 258 VDNIVERLSRYRTKLVRLGHPARLLPQVLDSALDAQVLRADNSSLAGDIRKEMKVLNSKL 317
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
LK KDKNT+R+I+KELRTL+KEERKRQQLAV DVIKNADVVL+TLTGA S+KLD +FDL
Sbjct: 318 LKAKDKNTKRDIRKELRTLAKEERKRQQLAVADVIKNADVVLSTLTGASSKKLDGITFDL 377
Query: 373 VIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG 432
VIIDEAAQALE+ACWIALLKG RC+LAGDHLQLPPT+QS EAEKKG+G+TLFERL + YG
Sbjct: 378 VIIDEAAQALEMACWIALLKGPRCVLAGDHLQLPPTIQSAEAEKKGMGKTLFERLTEAYG 437
Query: 433 DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLI 482
D++TSMLT+QYRMHE IMNWSSK+LYN+KIKAH S VKR+SSTEPT++LI
Sbjct: 438 DQITSMLTIQYRMHELIMNWSSKELYNNKIKAHSSVADHMLYDIEEVKRSSSTEPTIILI 497
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
D GCDMEE KDEE+STMNEGEA V++AHAK L++SGV ASDIGIITPYAAQV LK++R
Sbjct: 498 DTTGCDMEEVKDEEESTMNEGEAAVSIAHAKLLVESGVRASDIGIITPYAAQVTCLKMMR 557
Query: 543 SKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCL 602
+KD KLK++E+STVDGFQGREKEAIIISMVRSNSKKEVGFLSD RRMNVAVTRARRQCCL
Sbjct: 558 NKDTKLKDLEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNVAVTRARRQCCL 617
Query: 603 VCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
VCD ETVS+D FLKRL+EYFEE+ EYLS SEY
Sbjct: 618 VCDVETVSNDKFLKRLVEYFEENGEYLSASEY 649
>gi|224029893|gb|ACN34022.1| unknown [Zea mays]
gi|414871609|tpg|DAA50166.1| TPA: hypothetical protein ZEAMMB73_963119 [Zea mays]
Length = 646
Score = 1028 bits (2659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/632 (78%), Positives = 555/632 (87%), Gaps = 14/632 (2%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
+SLQEFVS M PLIDLEK AEISA + A + +++G I NLKC DAQTGLMGKT
Sbjct: 16 MSLQEFVSCMQPLIDLEKAAEISAESETSAK----SLERRGCVIANLKCTDAQTGLMGKT 71
Query: 73 LLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEE 132
LLEFQ KGDVLP+HKFGTHDVV LKPNKAD GS +LGQGVVYRLKDSSITVAFDDIPE+
Sbjct: 72 LLEFQPNKGDVLPSHKFGTHDVVALKPNKADAGSASLGQGVVYRLKDSSITVAFDDIPED 131
Query: 133 GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKP 192
GLNSPLRLEKLANEVTYRRMKDALI+LSK VQ GP A L+PVLFGE+ P K + F P
Sbjct: 132 GLNSPLRLEKLANEVTYRRMKDALIELSKAVQTGPCANLVPVLFGEKAPMRSKDAMKFSP 191
Query: 193 FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIA 252
FN NLD SQK+AISKAL S++VF+LHGPPGTGKTTT++EIILQEVKRGSKILACAASNIA
Sbjct: 192 FNKNLDDSQKEAISKALGSRDVFLLHGPPGTGKTTTIIEIILQEVKRGSKILACAASNIA 251
Query: 253 VDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKL 312
VDNIVERL +R +LVRLGHPARLLPQVL+SALDAQVLR DNSSLA DIRKEMK LN KL
Sbjct: 252 VDNIVERLARYRTKLVRLGHPARLLPQVLDSALDAQVLRADNSSLAGDIRKEMKVLNSKL 311
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
LK KD+NT+R+I+KEL+TL+KEERKRQQLAVTDV+KNADVVLTTLTGA S+KL+ +FDL
Sbjct: 312 LKAKDRNTKRDIRKELKTLAKEERKRQQLAVTDVLKNADVVLTTLTGASSKKLNGITFDL 371
Query: 373 VIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG 432
V+IDEAAQALE+ACWIALLKG RCILAGDHLQLPPT+QSVEAEKKG+G+TLFERL + YG
Sbjct: 372 VVIDEAAQALEVACWIALLKGPRCILAGDHLQLPPTIQSVEAEKKGMGKTLFERLTEAYG 431
Query: 433 DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLI 482
+E+TSMLTVQYRMHEHIM+WSSK+LYN+KIKAH S V R+SSTEPT++LI
Sbjct: 432 EEITSMLTVQYRMHEHIMSWSSKELYNNKIKAHSSVAGHMLYDLEEVTRSSSTEPTIVLI 491
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
D GCDMEE KDEE+STMNEGEA V++AHAK L++SGV+ASDIGIITPYAAQV LK++R
Sbjct: 492 DTTGCDMEEVKDEEESTMNEGEAAVSIAHAKLLVESGVNASDIGIITPYAAQVTCLKMMR 551
Query: 543 SKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCL 602
+KD KLK++E+STVDGFQGREKEAIIISMVRSNSKKEVGFLSD RRMNVAVTRARRQCCL
Sbjct: 552 NKDAKLKDLEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNVAVTRARRQCCL 611
Query: 603 VCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
VCD ETVSSD FLKRL+EYFEE+ EYLS SEY
Sbjct: 612 VCDVETVSSDRFLKRLVEYFEENGEYLSASEY 643
>gi|242038955|ref|XP_002466872.1| hypothetical protein SORBIDRAFT_01g015520 [Sorghum bicolor]
gi|241920726|gb|EER93870.1| hypothetical protein SORBIDRAFT_01g015520 [Sorghum bicolor]
Length = 650
Score = 1027 bits (2656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/632 (78%), Positives = 555/632 (87%), Gaps = 14/632 (2%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
+SLQEFVS MAPLIDLEK AEI+A + A + +++G I NLKC DAQTGLMGKT
Sbjct: 20 MSLQEFVSSMAPLIDLEKAAEITAESETSAK----SLERRGCVIANLKCTDAQTGLMGKT 75
Query: 73 LLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEE 132
LLEFQ KGDVLPAHKFGTHDVV LKPNKAD GS +LGQGVVYRLKDSSITVAFDDIPE+
Sbjct: 76 LLEFQPNKGDVLPAHKFGTHDVVALKPNKADAGSASLGQGVVYRLKDSSITVAFDDIPED 135
Query: 133 GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKP 192
GLNSPLRLEKLANEVTYRRMKDALI+LSK VQ GP A L+PVLFGE+ P K + F P
Sbjct: 136 GLNSPLRLEKLANEVTYRRMKDALIELSKAVQTGPCANLVPVLFGEKAPMRSKDTMKFSP 195
Query: 193 FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIA 252
FN NLD SQK+AISKAL S++VF+LHGPPGTGKTTT++EIILQEVKRGSKILACAASNIA
Sbjct: 196 FNKNLDDSQKEAISKALGSRDVFLLHGPPGTGKTTTIIEIILQEVKRGSKILACAASNIA 255
Query: 253 VDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKL 312
VDNIVERL +R +LVRLGHPARLLPQVL+SALDAQVLR DNSSLA DIRKEMK LN KL
Sbjct: 256 VDNIVERLARYRTKLVRLGHPARLLPQVLDSALDAQVLRADNSSLAGDIRKEMKVLNSKL 315
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
LK KD+NT+R+I+KELR L+KEERKRQQLAVTDV+KNADVVLTTLTGA S+KL+ +FDL
Sbjct: 316 LKAKDRNTKRDIRKELRALAKEERKRQQLAVTDVLKNADVVLTTLTGASSKKLNGITFDL 375
Query: 373 VIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG 432
V+IDEAAQALE+ACWIALLKG RCILAGDHLQLPPT+QSVEAEKKG+G+TLFERL + YG
Sbjct: 376 VVIDEAAQALEVACWIALLKGPRCILAGDHLQLPPTIQSVEAEKKGMGKTLFERLTEAYG 435
Query: 433 DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLI 482
+E+TSMLTVQYRMHEHIM+WSSK+LYN+KIKAH S V R+SSTEPT++LI
Sbjct: 436 EEITSMLTVQYRMHEHIMSWSSKELYNNKIKAHSSVAGHMLYDLEEVTRSSSTEPTIILI 495
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
D GCDMEE KDEE+STMNEGEA V++AHAK L++SGV+ASDIGIITPY+AQV LK++R
Sbjct: 496 DTTGCDMEEVKDEEESTMNEGEAAVSIAHAKLLVESGVNASDIGIITPYSAQVTCLKMMR 555
Query: 543 SKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCL 602
+KD KLK++E+STVDGFQGREKEAIIISMVRSNSKKEVGFLSD RRMNVAVTRARRQCCL
Sbjct: 556 NKDAKLKDLEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNVAVTRARRQCCL 615
Query: 603 VCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
VCD ETVS+D FLKRL+EYFEE+ EYLS SEY
Sbjct: 616 VCDVETVSNDRFLKRLVEYFEENGEYLSASEY 647
>gi|326505658|dbj|BAJ95500.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 650
Score = 1027 bits (2655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/632 (78%), Positives = 554/632 (87%), Gaps = 14/632 (2%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
+SLQEFVS MAPLIDLEK AEISA + + R +++GS + NLKC DAQTGLMGKT
Sbjct: 20 MSLQEFVSSMAPLIDLEKAAEISAESEASSKRK----ERRGSVMPNLKCTDAQTGLMGKT 75
Query: 73 LLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEE 132
LLEFQ KGDVLP HKFGTHDVV LKPNKAD GSPALGQGVVYRLKDSSITV FDDIPE+
Sbjct: 76 LLEFQPNKGDVLPPHKFGTHDVVALKPNKADAGSPALGQGVVYRLKDSSITVVFDDIPED 135
Query: 133 GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKP 192
GLNSPLRLEKLANEVTYRRMKDALIQLSKG+Q GP+A L+PVLFGE P K + F P
Sbjct: 136 GLNSPLRLEKLANEVTYRRMKDALIQLSKGIQAGPSANLVPVLFGENSPMRSKDAVKFSP 195
Query: 193 FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIA 252
FN NLD SQKDAISKAL S++VF+LHGPPGTGKTTT++EIILQEVKRG+KILACAASNIA
Sbjct: 196 FNKNLDDSQKDAISKALRSRDVFLLHGPPGTGKTTTIIEIILQEVKRGAKILACAASNIA 255
Query: 253 VDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKL 312
VDNIVERL +R +LVRLGHPARLLPQVL+SALDAQVLR DNSSLA DIRKEMK LN KL
Sbjct: 256 VDNIVERLSQYRTKLVRLGHPARLLPQVLDSALDAQVLRADNSSLAGDIRKEMKVLNSKL 315
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
LK KD+NT+R+I+KEL+TL+KEERKRQQLAV DVIKNADVVL+TLTGA S+K+ SFDL
Sbjct: 316 LKAKDRNTKRDIRKELKTLAKEERKRQQLAVADVIKNADVVLSTLTGASSKKIAGISFDL 375
Query: 373 VIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG 432
VIIDEAAQALE+ACWIALLKG+RC+LAGDHLQLPPT+QSVEAEKKG+G+TLFERL + YG
Sbjct: 376 VIIDEAAQALEVACWIALLKGARCVLAGDHLQLPPTIQSVEAEKKGMGKTLFERLTEGYG 435
Query: 433 DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLI 482
DE+TSMLTVQYRMHE IMNWSSK+LY++KIKAH S GV ++SSTEPT++L+
Sbjct: 436 DEITSMLTVQYRMHELIMNWSSKELYSNKIKAHSSVAGHMLYDLEGVNKSSSTEPTIILV 495
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
D GCDMEE KDEE+STMNEGEA V++AHAK L++SGV ASDIGIITPY+AQV LK++R
Sbjct: 496 DTTGCDMEEVKDEEESTMNEGEAAVSIAHAKLLVESGVRASDIGIITPYSAQVTCLKMMR 555
Query: 543 SKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCL 602
+KD KLK++E+STVDGFQGREKEAIIISMVRSN KKEVGFLSD RRMNVAVTRARRQCC+
Sbjct: 556 NKDAKLKDLEISTVDGFQGREKEAIIISMVRSNQKKEVGFLSDHRRMNVAVTRARRQCCV 615
Query: 603 VCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
VCD ETVSSD FLKRL+EYFEE+ EYLS SEY
Sbjct: 616 VCDAETVSSDRFLKRLVEYFEENGEYLSASEY 647
>gi|357121239|ref|XP_003562328.1| PREDICTED: DNA-binding protein SMUBP-2-like [Brachypodium
distachyon]
Length = 652
Score = 1008 bits (2607), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/632 (77%), Positives = 552/632 (87%), Gaps = 14/632 (2%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
+SLQEFVS M+PLIDLEK AEIS+ + + R +++G + NLKC DAQTGLMGKT
Sbjct: 22 MSLQEFVSSMSPLIDLEKAAEISSESEASSKR----LERRGCVMPNLKCTDAQTGLMGKT 77
Query: 73 LLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEE 132
LLEFQ KGDVLP HKFGTHDVV LKPNKAD GS +LGQGVVYRLKDSSITVAFDDIPE+
Sbjct: 78 LLEFQPNKGDVLPPHKFGTHDVVALKPNKADAGSASLGQGVVYRLKDSSITVAFDDIPED 137
Query: 133 GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKP 192
GLNSPLRLEKLANEVTYRRMKDALIQLSK +Q GP+A L+PVLFGE P K + F P
Sbjct: 138 GLNSPLRLEKLANEVTYRRMKDALIQLSKAIQTGPSANLVPVLFGENSPLCSKDAVKFSP 197
Query: 193 FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIA 252
FN NLD SQKDAISKAL S++VF+LHGPPGTGKTTT++EIILQEVKRGSKILACAASNIA
Sbjct: 198 FNKNLDDSQKDAISKALRSRDVFLLHGPPGTGKTTTIIEIILQEVKRGSKILACAASNIA 257
Query: 253 VDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKL 312
VDNIVERL +R +LVRLGHPARLLPQVL+SALDAQVLR DNSSLA DIRKEMK LN KL
Sbjct: 258 VDNIVERLSQYRTKLVRLGHPARLLPQVLDSALDAQVLRADNSSLAGDIRKEMKVLNSKL 317
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
LK KD+NT+R+I+KEL+TL+KEERKRQQLAV DVIKNADVVL+TLTGA S+KLD +FDL
Sbjct: 318 LKAKDRNTKRDIRKELKTLAKEERKRQQLAVADVIKNADVVLSTLTGASSKKLDGITFDL 377
Query: 373 VIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG 432
VIIDEAAQALE+ACWIALLKG RC+LAGDHLQLPPT+QSVEAEKKG+G+TLFERL + YG
Sbjct: 378 VIIDEAAQALEVACWIALLKGPRCVLAGDHLQLPPTIQSVEAEKKGMGKTLFERLTEGYG 437
Query: 433 DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLI 482
D++TSMLT+QYRMHE IMNWSSK+LYN+KIKAH S V R+SSTEPT++LI
Sbjct: 438 DKITSMLTIQYRMHELIMNWSSKELYNNKIKAHSSVAGHMLYDLENVNRSSSTEPTIILI 497
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
D GCDMEE KDEE+STMNEGEA V++AHAK L++SGV ASDIGIITPY+AQV LK++R
Sbjct: 498 DTTGCDMEEVKDEEESTMNEGEAAVSVAHAKLLVESGVLASDIGIITPYSAQVTCLKMMR 557
Query: 543 SKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCL 602
+KD KLK++E+STVDGFQGREKEAIIISMVRSNSKKEVGFLSD RRMNVAVTRARRQCC+
Sbjct: 558 NKDAKLKDLEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNVAVTRARRQCCI 617
Query: 603 VCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
VCD ETVS+D FLKRL+EYFEE+ EYLS SEY
Sbjct: 618 VCDAETVSNDKFLKRLVEYFEENGEYLSASEY 649
>gi|302800219|ref|XP_002981867.1| hypothetical protein SELMODRAFT_179218 [Selaginella moellendorffii]
gi|300150309|gb|EFJ16960.1| hypothetical protein SELMODRAFT_179218 [Selaginella moellendorffii]
Length = 643
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/632 (63%), Positives = 504/632 (79%), Gaps = 10/632 (1%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
V+L+ FVS M PL++LEKEAEI+AS + N D Q++GS + LKCV + GL+GK+
Sbjct: 11 VTLESFVSKMLPLLELEKEAEIAASTETIGMTNPDVLQQRGSALKGLKCVGVEAGLLGKS 70
Query: 73 LLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEE 132
LL Q G++LP+HK THDVV+LKPNK + +LGQGVVYR+KD SITVA DD+P+E
Sbjct: 71 LLLLQPNSGELLPSHKLSTHDVVLLKPNKGGSAAESLGQGVVYRIKDKSITVAMDDVPDE 130
Query: 133 GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKP 192
G+NS LRLEK+ANEVTY+R+K L+ L KGV GPA L+PVLFGE+ P+ K ++P
Sbjct: 131 GVNSLLRLEKVANEVTYQRLKSTLLDLGKGVSRGPATDLVPVLFGEKPPSFSKTHATYEP 190
Query: 193 FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIA 252
+N+ LD SQ A+ ALS+++V +LHGPPGTGKTT VVEIILQEVKRG K+LACA+SNIA
Sbjct: 191 YNTELDESQVKAVKMALSAQDVMLLHGPPGTGKTTAVVEIILQEVKRGLKVLACASSNIA 250
Query: 253 VDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKL 312
VDN+VERL H+V++VRLGHPARLLPQVL+ ALDAQVL+ DNSSLA DIRKE+ LN K+
Sbjct: 251 VDNMVERLACHKVKVVRLGHPARLLPQVLDCALDAQVLKTDNSSLAKDIRKEISVLNAKI 310
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
LK KD+ +R E+++ELR LSKEER+RQQ AVTDVI+ A VVLTTLTGA+S +L FD+
Sbjct: 311 LKAKDRKSRDELRRELRQLSKEERQRQQKAVTDVIQGASVVLTTLTGAMSAQLQKVDFDV 370
Query: 373 VIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG 432
V++DEAAQALE ACWIA+LKG RC+LAGDHLQL PTV S EAEK+G G TLFERLA LY
Sbjct: 371 VVLDEAAQALETACWIAILKGRRCLLAGDHLQLAPTVLSKEAEKQGFGTTLFERLAGLYA 430
Query: 433 DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHP----------SGVKRTSSTEPTLLLI 482
+ +MLTVQYRMHEHIM+WSS +LY KI+AH GVK+T +TE TL+LI
Sbjct: 431 SQAMTMLTVQYRMHEHIMDWSSHELYGGKIQAHELVASRKLFELDGVKKTPATEHTLVLI 490
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
DI GCDMEE KDE +S+ NEGEA +A+ HA++L++SGV A DIGI+TPYAAQV +L+ +R
Sbjct: 491 DICGCDMEESKDETESSFNEGEARIAITHAQKLVESGVKAIDIGIVTPYAAQVNVLRRMR 550
Query: 543 SKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCL 602
+++ +L +E+ST+DGFQGREKEA+IISMVRSN KKEVGFLSD+RRMNVAVTRA+RQCC+
Sbjct: 551 NEEQRLLEVEISTIDGFQGREKEAMIISMVRSNDKKEVGFLSDKRRMNVAVTRAKRQCCV 610
Query: 603 VCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
+CD++TV D FLKRL++YFE+H EY G Y
Sbjct: 611 ICDSDTVGKDPFLKRLLDYFEKHGEYCYGLYY 642
>gi|159464225|ref|XP_001690342.1| hypothetical protein CHLREDRAFT_127992 [Chlamydomonas reinhardtii]
gi|158279842|gb|EDP05601.1| predicted protein [Chlamydomonas reinhardtii]
Length = 640
Score = 633 bits (1632), Expect = e-179, Method: Compositional matrix adjust.
Identities = 338/639 (52%), Positives = 445/639 (69%), Gaps = 33/639 (5%)
Query: 28 LEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKG------ 81
+E+ AE++ + + + +TAQ +G T+LNL+ D + GL+G+TLL S KG
Sbjct: 1 MERAAEVAQATEETSMCSPETAQARGRTLLNLRVDDMEGGLLGRTLLTLVSNKGYGAGGP 60
Query: 82 -DVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRL 140
LP HKFG HDVV L+P++ PA+ GV+YR++++SITVA D+ PEEGL+ PLRL
Sbjct: 61 AAELPPHKFGPHDVVALRPSRGPADGPAVVSGVIYRIRENSITVAVDEAPEEGLDQPLRL 120
Query: 141 EKLANEVTYRRMK---DALIQLSKGVQNGPAAGLIP------VLFGEQKPTVLKKDIAFK 191
EKLANEVTY+R++ D+L++ G P L+P V++G ++P + +K
Sbjct: 121 EKLANEVTYQRLRGTLDSLLKARSGTAATPDGRLLPGGALLDVVWGRREPQFAAEAPEWK 180
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNI 251
P N+ LD SQ+ A++ ALS+K++ ++HGPPGTGKTT VVEIILQEV RGS++LA +ASNI
Sbjct: 181 PLNTGLDDSQRQAVTLALSAKDLALVHGPPGTGKTTAVVEIILQEVARGSRVLAASASNI 240
Query: 252 AVDNIVERLV--PHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALN 309
AVDN+VERLV +++LVR+GHPARLLP VL+S+L+A VLR DNS+LA D R E+K++N
Sbjct: 241 AVDNLVERLVRANPKLKLVRMGHPARLLPAVLDSSLEAHVLRSDNSALARDCRAEIKSIN 300
Query: 310 GKLLK--TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDN 367
+LLK +D+ RRE++ +LR L KEER+RQ+ AV +VIK A VV TLTG R+LD
Sbjct: 301 ARLLKLGPRDRAERRELRGDLRRLGKEERQRQEAAVAEVIKGAQVVCCTLTGVSHRQLDK 360
Query: 368 TSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERL 427
FD+ ++DEAAQALE A W ALL+ R +LAGDHLQLPPTV S EA + GL RTLFERL
Sbjct: 361 ELFDVAVVDEAAQALEAATWGALLRARRAVLAGDHLQLPPTVVSDEAARLGLARTLFERL 420
Query: 428 ADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT----------SSTEP 477
++MLTVQYRM++ IM WSS +LY+ K+ AHPS + T +
Sbjct: 421 QTSV-PTASAMLTVQYRMNKAIMQWSSDELYHGKLTAHPSVAEHTLRDMPPDAAAGAPGA 479
Query: 478 TLLLIDIAGCDMEEKKDEEDSTM-NEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVV 536
+D AGC EE+++ E S+ N GEA+ MAH RL++ G+ IGIITPY AQV
Sbjct: 480 GCKGMDTAGCGFEEQQEAEGSSYANPGEAKAVMAHVARLVRIGIPPQHIGIITPYNAQVA 539
Query: 537 LLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
LLK LR++ +E+S+VDGFQGREKEAI++SMVRSN VGFLSDRRRMNVAVTRA
Sbjct: 540 LLKELRAQSVG-GALEISSVDGFQGREKEAILVSMVRSNDGGGVGFLSDRRRMNVAVTRA 598
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
RR C + CD+ETVS DGFLKRL+EYF H EY S +E L
Sbjct: 599 RRHCAVFCDSETVSQDGFLKRLVEYFSTHGEYTSAAELL 637
>gi|145348783|ref|XP_001418823.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579053|gb|ABO97116.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 609
Score = 603 bits (1555), Expect = e-169, Method: Compositional matrix adjust.
Identities = 321/610 (52%), Positives = 413/610 (67%), Gaps = 27/610 (4%)
Query: 51 KKGSTILNLKCVDAQTGLMGKTLLEFQ------STKGDVLPAHKFGTHDVVVLKPNKADL 104
++G +L L D + GL+G+T++ + + LP HK HDVV L+PNK+
Sbjct: 1 RRGRALLGLTATDLRGGLLGQTIVTLELASRPNGSDALPLPPHKLSPHDVVCLRPNKSSA 60
Query: 105 GSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSK--G 162
L GVVYR++D+ I +A DD+P+E L+ LRLE+L+NE T++R+ A+ ++ K G
Sbjct: 61 EGEPLASGVVYRIRDTQIELACDDMPDE-LSGTLRLERLSNEATHKRLVSAVERVGKYGG 119
Query: 163 VQNG--PAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGP 220
+ P A L+ V FG+ KP V K + N+ LD SQ+ AI AL + ++HGP
Sbjct: 120 SSDAKQPGAHLVGVAFGDSKPRVSKTGKEVEWINTALDASQRGAIEHALRCVDFALIHGP 179
Query: 221 PGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRV------RLVRLGHPA 274
PGTGKTT VVE + QEV RGS++LAC ASNIA+DN+VERL+ ++ RLVR+GHPA
Sbjct: 180 PGTGKTTAVVEYVAQEVARGSRVLACTASNIAIDNLVERLMKIKLPEGGEMRLVRVGHPA 239
Query: 275 RLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK---TKDKNTRREIQKELRTL 331
RLLP VL ++L+AQ+L DNS LA D KE K L KLLK KD+ R E++KELR L
Sbjct: 240 RLLPSVLAASLEAQLLASDNSKLAKDCAKESKILRRKLLKLNDRKDRVERNEVRKELRVL 299
Query: 332 SKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL 391
+KEER RQ+ A+ DV+ A VV +TL+GA+S L FD+V+IDEAAQALE ACW A+L
Sbjct: 300 AKEERNRQKAAMRDVVDGARVVCSTLSGALSGTLKFQDFDVVVIDEAAQALEAACWGAVL 359
Query: 392 KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN 451
KG + +LAGDHLQLPPTV S EA+ KGL TLF+RL D+YGD V MLTVQYRMH IM
Sbjct: 360 KGKKTVLAGDHLQLPPTVISDEAQAKGLSDTLFQRLHDMYGDLVARMLTVQYRMHADIMT 419
Query: 452 WSSKQLYNSKIKAHPSGVKR-----TSSTEPTLLLIDIAGCDMEEKKDEE-DSTMNEGEA 505
WSS+ +Y K+ A S P LLLID AGCDM+E+ +E+ +S N EA
Sbjct: 420 WSSEAMYQGKLTAAESVATHRLRGDGEDDPPVLLLIDTAGCDMDERVEEDGESKENPDEA 479
Query: 506 EVAMAHAKRLI-QSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREK 564
V M +RL+ + V DIG+ITPY QV +L+ LR++DD LKN+EVSTVDGFQGREK
Sbjct: 480 AVVMEVVRRLVARHDVAVDDIGVITPYNGQVTVLRELRARDDALKNLEVSTVDGFQGREK 539
Query: 565 EAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
EAIIIS VRSN+ EVGFLSD RRMNVAVTRAR+ CCL+ D++TVSSD FL L+EYFE
Sbjct: 540 EAIIISAVRSNASGEVGFLSDSRRMNVAVTRARKHCCLIIDSDTVSSDRFLATLVEYFET 599
Query: 625 HAEYLSGSEY 634
H + S + Y
Sbjct: 600 HGDVASAAAY 609
>gi|303286453|ref|XP_003062516.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456033|gb|EEH53335.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 648
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 326/648 (50%), Positives = 433/648 (66%), Gaps = 48/648 (7%)
Query: 28 LEKEAEISASITSGASRNLD--TAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTK----- 80
LE++AE+ S GA R + TA K+G +L LK VDA+ GL+GKT+L F+S+K
Sbjct: 3 LERDAEVEQS--EGALREMSPATAAKRGRALLGLKIVDARGGLLGKTVLTFESSKRPTAA 60
Query: 81 GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPE-EGLNSPLR 139
LP HKF HDVV ++P+K G + GVVYR+KD++I VA DD P+ +G++ +R
Sbjct: 61 APPLPPHKFTPHDVVCVRPSKGVGGGEPIAAGVVYRVKDTAIEVAVDDAPDSDGVDQAVR 120
Query: 140 LEKLANEVTYRRMKDALIQLSKGVQNGPAAG-------------LIPVLFGEQKPTVLKK 186
LEKL+NE T++R++ AL +L + G A ++ V+FG+ P K+
Sbjct: 121 LEKLSNETTHKRLRAALERLGSAPRGGGGAASGSGPGGGGAYGRVVDVMFGKTPPRFAKR 180
Query: 187 DIA----FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSK 242
D A + FN LD SQKDA++ AL + ++ ++HGPPGTGKTT VVE + +EV RG++
Sbjct: 181 DAADDGFARFFNPRLDASQKDAVAHALRAVDLALIHGPPGTGKTTVVVEYVAREVARGAR 240
Query: 243 ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR 302
IL CAASN+AVDN+VERL R+ RLGHPARLL VLE++L+AQVLR DNSSLA D
Sbjct: 241 ILCCAASNVAVDNLVERLA----RITRLGHPARLLASVLENSLEAQVLRSDNSSLARDCE 296
Query: 303 KEMKALNGKLLKTKDKNTRR-EIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAV 361
+E AL +LLK D TR ELR L+KE R RQ+LAV +V+ +A+VV TL GA+
Sbjct: 297 RESAALRRRLLKLADAKTREGAFSLELRRLAKETRARQRLAVDEVVASANVVCCTLAGAL 356
Query: 362 SRKLDN---TSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKG 418
L + ++FD+V+IDEAAQALE +CW A+++G + +LAGDHLQLPPTV S A ++G
Sbjct: 357 GGVLKDQARSTFDVVVIDEAAQALEASCWGAIMRGGKVVLAGDHLQLPPTVLSDVAAREG 416
Query: 419 LGRTLFERL-ADLYGDEVTSMLTVQYRMHEHIMN---WSSKQLYNSKIKAHPSGVKRT-- 472
L TLF+R A Y + V MLT QYRMHE IM W+S +Y+ + A RT
Sbjct: 417 LSETLFQRAHAKWYRENVAVMLTTQYRMHEDIMRRVLWASNAMYDGALLASEDARGRTLR 476
Query: 473 -SSTEP--TLLLIDIAGCDMEEKKDEEDSTM-NEGEAEVAMAHAKRLIQSG-VHASDIGI 527
+S P L L+D AGCD +E+++EE ++ N GEA VAM LI SG V A D+GI
Sbjct: 477 SASGAPLGALQLVDTAGCDCDERQEEEGASRDNPGEAAVAMRIVADLISSGAVAADDVGI 536
Query: 528 ITPYAAQVVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR 586
ITPY+AQV L+ LR+ +D L K +E+STVDGFQGREKEAI+IS VRSN + +VGFLSD
Sbjct: 537 ITPYSAQVGTLRDLRAANDALFKGVEISTVDGFQGREKEAIVISAVRSNDRGDVGFLSDA 596
Query: 587 RRMNVAVTRARRQCCLVCDTETVS-SDGFLKRLIEYFEEHAEYLSGSE 633
RRMNVAVTRAR +C LVCDTET++ D FL L+++FE EY+S +E
Sbjct: 597 RRMNVAVTRARARCVLVCDTETIARKDAFLAGLVKHFETRGEYISAAE 644
>gi|215539488|gb|AAI71648.1| Ighmbp2l protein [Danio rerio]
Length = 993
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 290/615 (47%), Positives = 398/615 (64%), Gaps = 26/615 (4%)
Query: 45 NLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKG---DVLPAHKFGTHDVVVLKPNK 101
+L Q KG ++ L+ TG+ G+ L+ F+ K VLP++ FG D++ L +
Sbjct: 33 SLKNLQHKGVCLMKLQIGSQHTGMYGRLLVIFEPRKCIGLSVLPSNTFGPGDIIGLYQAE 92
Query: 102 ADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLN----SPLRLEKLANEVTYRRMKDALI 157
LG GVV R +S+TVAFDD ++G N L KLAN+VTYRR+ AL
Sbjct: 93 GQALPTQLGSGVVTRATQASLTVAFDDT-QDGTNLDRDGLYNLMKLANDVTYRRLSSALK 151
Query: 158 QLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFML 217
L+ G NGPA+ LI VLFG +P +L A + N+ LD SQK+A+S A+S K+V ++
Sbjct: 152 SLN-GYSNGPASHLISVLFGYSEPGILSHQYALEFNNTKLDDSQKEAVSFAISQKDVAII 210
Query: 218 HGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLL 277
HGPPGTGKTTTVVE+ILQ VK+ K+L CA SN+AVDN+VERL ++V+++RLGHPARLL
Sbjct: 211 HGPPGTGKTTTVVEVILQAVKQQQKVLCCAPSNVAVDNLVERLAKNKVKVLRLGHPARLL 270
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERK 337
+ + +LDA + DN+++ SDIRK+M ++ K +DK R +++E+ L +E R
Sbjct: 271 ESIQKHSLDAVLAHSDNTNIISDIRKDMDKAFNEIKKARDKGQRSNLRREIGELRRELRT 330
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVS----RKLDNTSFDLVIIDEAAQALEIACWIALLKG 393
R++ +++ ++K ADV+L T TGA + L N FDLV+IDE AQALE +CWIALLK
Sbjct: 331 REETSISQILKRADVILATNTGASDDGPLKHLPNDHFDLVVIDECAQALESSCWIALLKA 390
Query: 394 SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWS 453
+CILAGD+ QLPPT++S A KGL +L ERL YGD V MLT QYRM+ IM W+
Sbjct: 391 RKCILAGDYKQLPPTIKSQSAASKGLSVSLMERLIKKYGDSVVRMLTTQYRMNSAIMQWA 450
Query: 454 SKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKD-EEDSTMNE 502
S+Q+Y K+ AHPS GV T LLL+D AGC + E ++ +E S N+
Sbjct: 451 SEQMYQGKLIAHPSVEKHLLRDLAGVADVEETRIPLLLVDTAGCGLNEMENTDEQSKGNQ 510
Query: 503 GEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGR 562
GE ++ H K L ++GV DI II PY QV LL+ S K +E+ +VDGFQGR
Sbjct: 511 GEVDIVALHIKALTEAGVQVKDIAIIAPYNLQVDLLRQKLSH--KYAELEIKSVDGFQGR 568
Query: 563 EKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
EKEA+++S+VRSN K EVGFL++ RR+NVAVTRARRQ +VCD++TV + FLK L++Y
Sbjct: 569 EKEAVVLSLVRSNRKGEVGFLAEDRRINVAVTRARRQLVVVCDSQTVRNHDFLKSLVDYM 628
Query: 623 EEHAEYLSGSEYLNE 637
+H E + EYL +
Sbjct: 629 SKHGELRTAFEYLED 643
>gi|120952590|ref|NP_001038365.1| DNA-binding protein SMUBP-2 [Danio rerio]
Length = 997
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 291/615 (47%), Positives = 398/615 (64%), Gaps = 26/615 (4%)
Query: 45 NLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKG---DVLPAHKFGTHDVVVLKPNK 101
+L Q KG ++ L+ TG+ G+ L+ F+ K VLP++ FG D++ L +
Sbjct: 33 SLKNLQHKGVCLMKLQIGSQHTGMYGRLLVIFEPRKCIGLSVLPSNTFGPGDIIGLYQAE 92
Query: 102 ADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLN----SPLRLEKLANEVTYRRMKDALI 157
LG GVV R +S+TVAFDD ++G N L KLAN+VTYRR+ AL
Sbjct: 93 GQALPTQLGSGVVTRATQASLTVAFDDT-QDGTNLDRDGLYNLMKLANDVTYRRLSSALK 151
Query: 158 QLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFML 217
L+ G NGPA+ LI VLFG +P +L A + N+ LD SQK+A+S A+S K+V ++
Sbjct: 152 SLN-GYSNGPASHLISVLFGYSQPGILSHLYALEFNNTKLDDSQKEAVSFAISQKDVAII 210
Query: 218 HGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLL 277
HGPPGTGKTTTVVE+ILQ VK+ K+L CA SN+AVDN+VERL ++V+++RLGHPARLL
Sbjct: 211 HGPPGTGKTTTVVEVILQAVKQQQKVLCCAPSNVAVDNLVERLAKNKVKVLRLGHPARLL 270
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERK 337
+ + +LDA + DN+++ SDIRK+M ++ K +DK R +++E+ L +E R
Sbjct: 271 ESIQKHSLDAVLAHSDNTNIISDIRKDMDKAFNEIKKARDKGQRSNLRREIGELRRELRT 330
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVS----RKLDNTSFDLVIIDEAAQALEIACWIALLKG 393
R++ A++ ++K ADV+L T TGA + L N FDLV+IDE AQALE +CWIALLK
Sbjct: 331 REETAISQILKRADVILATNTGASDDGPLKHLPNDHFDLVVIDECAQALESSCWIALLKA 390
Query: 394 SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWS 453
+CILAGD+ QLPPT++S A KGL +L ERL YGD V MLT QYRM+ IM W+
Sbjct: 391 RKCILAGDYKQLPPTIKSQSAASKGLSVSLMERLIKKYGDSVVRMLTTQYRMNSAIMQWA 450
Query: 454 SKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKD-EEDSTMNE 502
S+Q+Y K+ AHPS GV T LLL+D AGC + E ++ +E S N+
Sbjct: 451 SEQMYQGKLIAHPSVEKHLLRDLAGVADVEETRIPLLLVDTAGCGLNEMENTDEQSKGNQ 510
Query: 503 GEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGR 562
GE ++ H K L ++GV DI II PY QV LL+ S K +E+ +VDGFQGR
Sbjct: 511 GEVDIVALHIKALTEAGVQVKDIAIIAPYNLQVDLLRQKLSH--KYAELEIKSVDGFQGR 568
Query: 563 EKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
EKEA+++S+VRSN K EVGFL++ RR+NVAVTRARRQ +VCD++TV + FLK L++Y
Sbjct: 569 EKEAVVLSLVRSNRKGEVGFLAEDRRINVAVTRARRQLVVVCDSQTVRNHDFLKSLVDYM 628
Query: 623 EEHAEYLSGSEYLNE 637
+H E + EYL +
Sbjct: 629 SKHGELRTAFEYLED 643
>gi|354502665|ref|XP_003513404.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cricetulus griseus]
gi|344257739|gb|EGW13843.1| DNA-binding protein SMUBP-2 [Cricetulus griseus]
Length = 987
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 300/650 (46%), Positives = 413/650 (63%), Gaps = 30/650 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + +L Q +G +L L+ TGL G
Sbjct: 2 ASSTVESFVAQQLQLLELERDAEVEERRSWQEHSSLKELQSRGVCLLKLQVSSQCTGLYG 61
Query: 71 KTLLEFQSTKGD---VLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ K VLP++ F + D+V L S L GV+ R+ S+TVAFD
Sbjct: 62 QRLVTFEPRKFGPVVVLPSNSFTSGDIVGLYDANE---SSQLATGVLTRITQKSVTVAFD 118
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + LN + RL KLAN+VTY+R+K AL+ L K GPA+ LI VL G P+
Sbjct: 119 ESHDFQLNLDRENTYRLLKLANDVTYKRLKKALMTLKK-YHCGPASSLIDVLLGGSTPSP 177
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ + +N+ LD SQK+A+S AL+ K V ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 178 TTEIPSLTFYNTALDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQGLKV 237
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL V + +LDA + R DN+ + +DIRK
Sbjct: 238 LCCAPSNIAVDNLVERLAMCKKRILRLGHPARLLESVQQHSLDAVLARSDNAQIVADIRK 297
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + GK KT+DK + + E++ L KE ++R++ A + ADVVL T TGA S
Sbjct: 298 DIDQVFGKNKKTQDKREKSNFRNEIKLLRKELKEREEAATVQSLTAADVVLATNTGASSD 357
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L FD+V++DE AQALE +CWI LLK +CILAGDH QLPPT S +A GL
Sbjct: 358 GPLKLLPENHFDVVVVDECAQALEASCWIPLLKAPKCILAGDHKQLPPTTISHKAALAGL 417
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
R+L ERLA+ +G V MLTVQYRMH+ I W+S+ +Y+ ++ AHPS GV
Sbjct: 418 SRSLMERLAEKHGAGVVRMLTVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGV 477
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDEEDSTM--NEGEAEVAMAHAKRLIQSGVHASDIGI 527
T T LLLID AGC + E DEEDS N GE + H + L+ +GVHA DI +
Sbjct: 478 ADTEETSVPLLLIDTAGCGLLE-LDEEDSQSKGNPGEVRLVTLHIQALVDAGVHAGDIAV 536
Query: 528 ITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
I PY QV LL+ +S K +E+ +VDGFQGREKEA+I++ VRSN K EVGFL++ R
Sbjct: 537 IAPYNLQVDLLR--QSLSSKHPELEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDR 594
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
R+NVAVTRARR ++CD+ TV++ FLK L++YF EH E + EYL++
Sbjct: 595 RINVAVTRARRHVAVICDSRTVNNHTFLKTLVDYFTEHGEVRTAFEYLDD 644
>gi|2498040|sp|Q60560.1|SMBP2_MESAU RecName: Full=DNA-binding protein SMUBP-2; AltName:
Full=ATP-dependent helicase IGHMBP2; AltName:
Full=Immunoglobulin mu-binding protein 2; AltName:
Full=Insulin II gene enhancer-binding protein; AltName:
Full=RIPE3B-binding complex 3B2 p110 subunit;
Short=RIP-1
gi|290919|gb|AAB00104.1| insulin II gene enhancer-binding protein [Mesocricetus auratus]
Length = 989
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 298/647 (46%), Positives = 411/647 (63%), Gaps = 30/647 (4%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
+++ FV+ L++LE++AE+ + +L Q +G +L L+ TGL G+ L
Sbjct: 5 TVESFVAQQLELLELERDAEVEERRSWQEHSSLKELQSRGVCLLKLQVSSQCTGLYGQRL 64
Query: 74 LEFQSTKGD---VLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIP 130
+ F+ K VLP++ F + D+V L S L GV+ R+ S+TVAFD+
Sbjct: 65 VTFEPRKLGPVVVLPSNSFTSGDIVGLYDANE---SSQLATGVLTRITQKSVTVAFDESH 121
Query: 131 EEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
+ LN + RL KLAN+VTY+R+K AL+ L K +GPA+ LI VL G P+ +
Sbjct: 122 DFQLNLDRENTYRLLKLANDVTYKRLKKALMTLKK-YHSGPASSLIDVLLGGSSPSPTTE 180
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILAC 246
F +N+ LD SQK+A+S AL+ K V ++HGPPGTGKTTTVVEIILQ VK+G KIL C
Sbjct: 181 IPPFTFYNTALDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQGLKILCC 240
Query: 247 AASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
A SN+AVDN+VERL + R++RLGHPARLL + +LDA + R DN+ + +DIRK++
Sbjct: 241 APSNVAVDNLVERLALCKKRILRLGHPARLLESAQQHSLDAVLARSDNAQIVADIRKDID 300
Query: 307 ALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS---- 362
+ GK KT+DK + + E++ L KE ++R++ A+ + ADVVL T TGA S
Sbjct: 301 QVFGKNKKTQDKREKSNFRNEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASSDGPL 360
Query: 363 RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRT 422
+ L FD+V++DE AQALE +CWI LLK +CILAGDH QLPPT S +A GL R+
Sbjct: 361 KLLPENHFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTISHKAALAGLSRS 420
Query: 423 LFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRT 472
L ERL + +G MLTVQYRMH+ I W+S+ +Y+ ++ AHPS GV T
Sbjct: 421 LMERLVEKHGAGAVRMLTVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGVADT 480
Query: 473 SSTEPTLLLIDIAGCDMEEKKDEEDSTM--NEGEAEVAMAHAKRLIQSGVHASDIGIITP 530
T LLLID AGC + E DEEDS N GE + H + L+ +GVHA DI +I P
Sbjct: 481 EETSVPLLLIDTAGCGLLE-LDEEDSQSKGNPGEVRLVTLHIQALVDAGVHAGDIAVIAP 539
Query: 531 YAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
Y QV LL+ +S +K +E+ +VDGFQGREKEA+I++ VRSN K EVGFL++ RR+N
Sbjct: 540 YNLQVDLLR--QSLSNKHPELEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRIN 597
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
VAVTRARR ++CD+ TV++ FLK L++YF EH E + EYL++
Sbjct: 598 VAVTRARRHVAVICDSRTVNNHAFLKTLVDYFTEHGEVRTAFEYLDD 644
>gi|380791299|gb|AFE67525.1| DNA-binding protein SMUBP-2, partial [Macaca mulatta]
Length = 784
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 295/649 (45%), Positives = 422/649 (65%), Gaps = 27/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK-GDV--LPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + G V LP++ F + D+V L + A+ GS L G++ R+ S+TVAFD
Sbjct: 62 RLLVTFEPRRCGSVAALPSNSFTSGDIVGLY-DAANEGS-QLATGILTRVTQKSVTVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ + RL KLAN+VTYRR+K ALI L K +GPA+ LI VLFG P+
Sbjct: 120 ESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKK-YHSGPASSLIEVLFGRSAPSP 178
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ FN++LD SQK+A+S ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 179 ASEIHPLTFFNTSLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 238
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL + + +LDA V R D++ + +DIRK
Sbjct: 239 LCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVVARSDSAQIVADIRK 298
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + K KT+DK + + E++ L KE + R++ A+ + + +A+VVL T TGA +
Sbjct: 299 DIDQVFVKNKKTQDKREKSNFRNEVKLLRKELKGREEAAILESLTSANVVLATNTGASAD 358
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPTV S +A GL
Sbjct: 359 GPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTVVSHKAALAGL 418
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ YG LTVQYRMH+ IM W+S +Y+ ++ AHPS GV
Sbjct: 419 SLSLMERLAEEYGARAVRTLTVQYRMHQAIMRWASDTMYHGQLTAHPSVAGHLLRDLPGV 478
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A D+ ++
Sbjct: 479 AATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDVAVV 538
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
+PY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 539 SPYNLQVDLLR--QSLAHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 596
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 597 INVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 645
>gi|383418089|gb|AFH32258.1| DNA-binding protein SMUBP-2 [Macaca mulatta]
Length = 991
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 295/649 (45%), Positives = 422/649 (65%), Gaps = 27/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK-GDV--LPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + G V LP++ F + D+V L + A+ GS L G++ R+ S+TVAFD
Sbjct: 62 RLLVTFEPRRCGSVAALPSNSFTSGDIVGLY-DAANEGS-QLATGILTRVTQKSVTVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ + RL KLAN+VTYRR+K ALI L K +GPA+ LI VLFG P+
Sbjct: 120 ESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKK-YHSGPASSLIEVLFGRSAPSP 178
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ FN++LD SQK+A+S ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 179 ASEIHPLTFFNTSLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 238
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL + + +LDA V R D++ + +DIRK
Sbjct: 239 LCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVVARSDSAQIVADIRK 298
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + K KT+DK + + E++ L KE + R++ A+ + + +A+VVL T TGA +
Sbjct: 299 DIDQVFVKNKKTQDKREKSNFRNEVKLLRKELKGREEAAILESLTSANVVLATNTGASAD 358
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPTV S +A GL
Sbjct: 359 GPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTVVSHKAALAGL 418
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ YG LTVQYRMH+ IM W+S +Y+ ++ AHPS GV
Sbjct: 419 SLSLMERLAEEYGARAVRTLTVQYRMHQAIMRWASDTMYHGQLTAHPSVAGHLLRDLPGV 478
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A D+ ++
Sbjct: 479 AATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDVAVV 538
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
+PY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 539 SPYNLQVDLLR--QSLAHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 596
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 597 INVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 645
>gi|387542852|gb|AFJ72053.1| DNA-binding protein SMUBP-2 [Macaca mulatta]
Length = 991
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 295/649 (45%), Positives = 422/649 (65%), Gaps = 27/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK-GDV--LPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + G V LP++ F + D+V L + A+ GS L G++ R+ S+TVAFD
Sbjct: 62 RLLVTFEPRRCGSVAALPSNSFTSGDIVGLY-DAANEGS-QLATGILTRVTQKSVTVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ + RL KLAN+VTYRR+K ALI L K +GPA+ LI VLFG P+
Sbjct: 120 ESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKK-YHSGPASSLIEVLFGRSAPSP 178
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ FN++LD SQK+A+S ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 179 ASEIHPLTFFNTSLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 238
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL + + +LDA V R D++ + +DIRK
Sbjct: 239 LCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVVARSDSAQIVADIRK 298
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + K KT+DK + + E++ L KE + R++ A+ + + +A+VVL T TGA +
Sbjct: 299 DIDQVFVKNKKTQDKREKSNFRNEVKLLRKELKGREEAAILESLTSANVVLATNTGASAD 358
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPTV S +A GL
Sbjct: 359 GPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTVVSHKAALAGL 418
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ YG LTVQYRMH+ IM W+S +Y+ ++ AHPS GV
Sbjct: 419 SLSLMERLAEEYGARAVRTLTVQYRMHQAIMRWASDTMYHGQLTAHPSVAGHLLRDLPGV 478
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A D+ ++
Sbjct: 479 AATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDVAVV 538
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
+PY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 539 SPYNLQVDLLR--QSLAHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 596
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 597 INVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 645
>gi|74210936|dbj|BAE25072.1| unnamed protein product [Mus musculus]
Length = 860
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 291/649 (44%), Positives = 414/649 (63%), Gaps = 28/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + +L Q +G +L L+ +TGL G
Sbjct: 2 ASSTVESFVAQQLQLLELERDAEVEERRSWQEHSSLRELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ K VLP++ F + D+V L + L GV+ R+ S+TVAFD
Sbjct: 62 QRLVTFEPRKFGPAVVLPSNSFTSGDIVGLYDTNEN---SQLATGVLTRITQKSVTVAFD 118
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + LN + RL KLAN+VTY+R+K AL+ L K +GPA+ LI +L G P+
Sbjct: 119 ESHDLQLNLDRENTYRLLKLANDVTYKRLKKALMTLKK-YHSGPASSLIDILLGSSTPSP 177
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ +N+ LD SQK+A+S AL+ K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 178 AMEIPPLSFYNTTLDLSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 237
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL V +LDA + R DN+ + +DIR+
Sbjct: 238 LCCAPSNIAVDNLVERLALCKKRILRLGHPARLLESVQHHSLDAVLARSDNAQIVADIRR 297
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + GK KT+DK + + E++ L KE ++R++ A+ + ADVVL T TGA S
Sbjct: 298 DIDQVFGKNKKTQDKREKGNFRSEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASSD 357
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L FD+V++DE AQALE +CWI LLK +CILAGDH QLPPT S A GL
Sbjct: 358 GPLKLLPEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTVSHRAALAGL 417
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
R+L ERLA+ +G V MLTVQYRMH+ IM W+S+ +Y+ ++ +HPS GV
Sbjct: 418 SRSLMERLAEKHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQLTSHPSVAGHLLKDLPGV 477
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLLID AGC + E ++E+ S N GE + H + L+ +GV A DI +I
Sbjct: 478 TDTEETRVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVI 537
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
PY QV LL+ +S +K +E+ +VDGFQGREKEA++++ VRSN K EVGFL++ RR
Sbjct: 538 APYNLQVDLLR--QSLSNKHPELEIKSVDGFQGREKEAVLLTFVRSNRKGEVGFLAEDRR 595
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L++YF EH E + EYL++
Sbjct: 596 INVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEVRTAFEYLDD 644
>gi|42490896|gb|AAH66215.1| Ighmbp2 protein, partial [Mus musculus]
Length = 866
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 290/649 (44%), Positives = 414/649 (63%), Gaps = 28/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + +L Q +G +L L+ +TGL G
Sbjct: 2 ASSTVESFVAQQLQLLELERDAEVEERRSWQEHSSLRELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ K VLP++ F + D+V L + L GV+ R+ S+TVAFD
Sbjct: 62 QRLVTFEPRKFGPAVVLPSNSFTSGDIVGLYDTNEN---SQLATGVLTRITQKSVTVAFD 118
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + LN + RL KLAN+VTY+R+K AL+ L K +GPA+ LI +L G P+
Sbjct: 119 ESHDLQLNLDRENTYRLLKLANDVTYKRLKKALMTLKK-YHSGPASSLIDILLGSSTPSP 177
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ +N+ LD SQK+A+S AL+ K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 178 AMEIPPLSFYNTTLDLSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 237
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL V +LDA + R DN+ + +DIR+
Sbjct: 238 LCCAPSNIAVDNLVERLALCKKRILRLGHPARLLESVQHHSLDAVLARSDNAQIVADIRR 297
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + GK KT+DK + + E++ L +E ++R++ A+ + ADVVL T TGA S
Sbjct: 298 DIDQVFGKNKKTQDKREKGNFRSEIKLLRRELKEREEAAIVQSLTAADVVLATNTGASSD 357
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L FD+V++DE AQALE +CWI LLK +CILAGDH QLPPT S A GL
Sbjct: 358 GPLKLLPEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTASHRAALAGL 417
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
R+L ERLA+ +G V MLTVQYRMH+ IM W+S+ +Y+ ++ +HPS GV
Sbjct: 418 SRSLMERLAEKHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQLTSHPSVAGHLLKDLPGV 477
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLLID AGC + E ++E+ S N GE + H + L+ +GV A DI +I
Sbjct: 478 TDTEETRVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVI 537
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
PY QV LL+ +S +K +E+ +VDGFQGREKEA++++ VRSN K EVGFL++ RR
Sbjct: 538 APYNLQVDLLR--QSLSNKHPELEIKSVDGFQGREKEAVLLTFVRSNRKGEVGFLAEDRR 595
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L++YF EH E + EYL++
Sbjct: 596 INVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEVRTAFEYLDD 644
>gi|153945808|ref|NP_033238.2| DNA-binding protein SMUBP-2 [Mus musculus]
gi|74149012|dbj|BAE32174.1| unnamed protein product [Mus musculus]
gi|148700981|gb|EDL32928.1| immunoglobulin mu binding protein 2 [Mus musculus]
gi|189442115|gb|AAI67242.1| Immunoglobulin mu binding protein 2 [synthetic construct]
Length = 993
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 291/649 (44%), Positives = 414/649 (63%), Gaps = 28/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + +L Q +G +L L+ +TGL G
Sbjct: 2 ASSTVESFVAQQLQLLELERDAEVEERRSWQEHSSLRELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ K VLP++ F + D+V L + L GV+ R+ S+TVAFD
Sbjct: 62 QRLVTFEPRKFGPAVVLPSNSFTSGDIVGLYDTNEN---SQLATGVLTRITQKSVTVAFD 118
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + LN + RL KLAN+VTY+R+K AL+ L K +GPA+ LI +L G P+
Sbjct: 119 ESHDLQLNLDRENTYRLLKLANDVTYKRLKKALMTLKK-YHSGPASSLIDILLGSSTPSP 177
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ +N+ LD SQK+A+S AL+ K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 178 AMEIPPLSFYNTTLDLSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 237
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL V +LDA + R DN+ + +DIR+
Sbjct: 238 LCCAPSNIAVDNLVERLALCKKRILRLGHPARLLESVQHHSLDAVLARSDNAQIVADIRR 297
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + GK KT+DK + + E++ L KE ++R++ A+ + ADVVL T TGA S
Sbjct: 298 DIDQVFGKNKKTQDKREKGNFRSEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASSD 357
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L FD+V++DE AQALE +CWI LLK +CILAGDH QLPPT S A GL
Sbjct: 358 GPLKLLPEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTVSHRAALAGL 417
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
R+L ERLA+ +G V MLTVQYRMH+ IM W+S+ +Y+ ++ +HPS GV
Sbjct: 418 SRSLMERLAEKHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQLTSHPSVAGHLLKDLPGV 477
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDEE-DSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLLID AGC + E ++E+ S N GE + H + L+ +GV A DI +I
Sbjct: 478 TDTEETRVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVI 537
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
PY QV LL+ +S +K +E+ +VDGFQGREKEA++++ VRSN K EVGFL++ RR
Sbjct: 538 APYNLQVDLLR--QSLSNKHPELEIKSVDGFQGREKEAVLLTFVRSNRKGEVGFLAEDRR 595
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L++YF EH E + EYL++
Sbjct: 596 INVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEVRTAFEYLDD 644
>gi|308805667|ref|XP_003080145.1| putative DNA helicase (ISS) [Ostreococcus tauri]
gi|116058605|emb|CAL54312.1| putative DNA helicase (ISS) [Ostreococcus tauri]
Length = 1305
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 311/660 (47%), Positives = 413/660 (62%), Gaps = 45/660 (6%)
Query: 3 GRKTKEKQSAVSLQEFVSVMAPLIDLEKEAEISAS--ITSGASRNLDTAQKKGSTILNLK 60
G +T E+ S SL + + L++LE+ AE ++ I G S AQ++G +L L
Sbjct: 661 GGETSERDSDESLAGWTTRTLGLLELERVAETESAEEILRGLSPA--AAQRRGRALLGLT 718
Query: 61 CVDAQTGLMGKTLLEFQSTK------GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVV 114
D + GL+G+T++ + K LP ++ HDVV L+ NKA L GVV
Sbjct: 719 ATDVRGGLLGQTVITLELAKRIDPSHPTPLPPNRLSPHDVVCLRANKATNEGEPLASGVV 778
Query: 115 YRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSK--GVQNG--PAAG 170
YR++D+ I +A DD P++ L+ LRLE+L+NE T++R+ A+ ++ K G + P A
Sbjct: 779 YRIRDAQIEIACDDAPDD-LSGTLRLERLSNEETHKRLVAAVERVGKYGGASDAKQPGAH 837
Query: 171 LIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVV 230
L+ V FG+ P V K K N NLD SQ++AI AL + ++HGP
Sbjct: 838 LVGVAFGDSSPRVAKSGKEVKWLNENLDSSQREAIEHALRCVDFALIHGP----XXXXXX 893
Query: 231 EIILQEVKRGSKILACAASNIAVDNIVERLVPHR------VRLVRLGHPARLLPQVLESA 284
+ QEV RGS++LAC ASNIA+DN+VERL+ + +RLVR+GHPARLLP VLE++
Sbjct: 894 XYVAQEVARGSRVLACTASNIAIDNLVERLMRVKLPGGGEMRLVRVGHPARLLPSVLEAS 953
Query: 285 LDAQVLRGDNSSLASDIRKEMKALNGKLLK---TKDKNTRREIQKELRTLSKEERKRQQL 341
L+AQ+L DNS LA D KE KAL KL K KD+ R E++KELR L KEER RQ+
Sbjct: 954 LEAQLLACDNSKLAKDCAKESKALRRKLAKLTDRKDRAERNEVRKELRILGKEERARQKE 1013
Query: 342 AVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGD 401
A+ DV+ A VV +TL+GA+S L FD+V+IDEAAQALE A +L G
Sbjct: 1014 AMKDVVNGARVVCSTLSGALSGTLKFQDFDVVVIDEAAQALEAAT----------VLGGR 1063
Query: 402 HLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSK 461
TV S++A+ KGL TLF+RL D YG+ ++ MLTVQYRMH IM WSS+ +Y K
Sbjct: 1064 SPAAASTVLSMKAQAKGLSDTLFQRLHDAYGNTISRMLTVQYRMHADIMTWSSEAMYQGK 1123
Query: 462 IKAHPSGVKRT-----SSTEPTLLLIDIAGCDMEEKKDEE-DSTMNEGEAEVAMAHAKRL 515
+ A S P LLLID AGCDMEE+ +E+ +S N GEAEV + +RL
Sbjct: 1124 LTAAESVATHRLRGDGEDDPPVLLLIDTAGCDMEERVEEDGESKENPGEAEVVVEVVRRL 1183
Query: 516 I-QSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRS 574
+ Q V +IG+ITPY QV LL+ LR++DD LKN+E+STVDGFQGREKEAIIIS VRS
Sbjct: 1184 VSQHEVPVDEIGVITPYNGQVTLLRELRARDDALKNLEISTVDGFQGREKEAIIISAVRS 1243
Query: 575 NSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
N++ EVGFLSD RRMNVAVTRAR+ CCL+ D++T SD FL L+EYFE H + S +EY
Sbjct: 1244 NTRGEVGFLSDSRRMNVAVTRARKHCCLIIDSDTSRSDTFLANLVEYFESHGDVASAAEY 1303
>gi|355566218|gb|EHH22597.1| DNA-binding protein SMUBP-2 [Macaca mulatta]
Length = 921
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 294/649 (45%), Positives = 421/649 (64%), Gaps = 27/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK-GDV--LPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + G V LP++ F + D+V L + A+ GS L G++ R+ S+TVAFD
Sbjct: 62 RLLVTFEPRRCGSVAALPSNSFTSGDIVGLY-DAANEGS-QLATGILTRVTQKSVTVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ + RL KLAN+VTYRR+K ALI L K +GPA+ LI VLFG P+
Sbjct: 120 ESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKK-YHSGPASSLIEVLFGRSAPSP 178
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ FN++LD SQK+A+S ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 179 ASEIHPLTFFNTSLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 238
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL + + +LDA V D++ + +DIRK
Sbjct: 239 LCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVVAWSDSAQIVADIRK 298
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + K KT+DK + + E++ L KE + R++ A+ + + +A+VVL T TGA +
Sbjct: 299 DIDQVFVKNKKTQDKREKSNFRNEVKLLRKELKGREEAAILESLTSANVVLATNTGASAD 358
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPTV S +A GL
Sbjct: 359 GPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTVVSHKAALAGL 418
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ YG LTVQYRMH+ IM W+S +Y+ ++ AHPS GV
Sbjct: 419 SLSLMERLAEEYGARAVRTLTVQYRMHQAIMRWASDTMYHGQLTAHPSVAGHLLRDLPGV 478
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A D+ ++
Sbjct: 479 AATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDVAVV 538
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
+PY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 539 SPYNLQVDLLR--QSLAHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 596
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 597 INVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 645
>gi|355751887|gb|EHH56007.1| DNA-binding protein SMUBP-2 [Macaca fascicularis]
Length = 921
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 295/647 (45%), Positives = 419/647 (64%), Gaps = 27/647 (4%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
+++ FV+ L++LE++AE + + +L Q +G +L L+ +TGL G+
Sbjct: 4 TAVESFVTKQLDLLELERDAEGEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYGRL 63
Query: 73 LLEFQSTK-GDV--LPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDI 129
L+ F+ + G V LP++ F + D+V L + A+ GS L G++ R+ S+TVAFD+
Sbjct: 64 LVTFEPRRCGSVAALPSNSFTSGDIVGLY-DAANEGS-QLATGILTRVTQKSVTVAFDES 121
Query: 130 PEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK 185
+ L+ + RL KLAN+VTYRR+K ALI L K +GPA+ LI VLFG P+
Sbjct: 122 HDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKK-YHSGPASSLIEVLFGRSAPSPAS 180
Query: 186 KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILA 245
+ FN++LD SQK+A+S ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K+L
Sbjct: 181 EIHPLTFFNTSLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLC 240
Query: 246 CAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEM 305
CA SNIAVDN+VERL + R++RLGHPARLL + + +LDA V R D++ + +DIRK++
Sbjct: 241 CAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVVARSDSAQIVADIRKDI 300
Query: 306 KALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS--- 362
+ K KT+DK + + E++ L KE + R++ A+ + + +A+VVL T TGA +
Sbjct: 301 DQVFVKNKKTQDKREKSNFRNEVKLLRKELKGREEAAILESLTSANVVLATNTGASADGP 360
Query: 363 -RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGR 421
+ L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPTV S +A GL
Sbjct: 361 LKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTVVSHKAALAGLSL 420
Query: 422 TLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKR 471
+L ERLA+ YG LTVQYRMH+ IM W+S +Y+ ++ AHPS GV
Sbjct: 421 SLMERLAEEYGARAVRTLTVQYRMHQAIMRWASDTMYHGQLTAHPSVAGHLLRDLPGVAA 480
Query: 472 TSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITP 530
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A D+ +++P
Sbjct: 481 TEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDVAVVSP 540
Query: 531 YAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
Y QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR+N
Sbjct: 541 YNLQVDLLR--QSLAHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRIN 598
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
VAVTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 599 VAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 645
>gi|730752|sp|P40694.1|SMBP2_MOUSE RecName: Full=DNA-binding protein SMUBP-2; AltName:
Full=ATP-dependent helicase IGHMBP2; AltName:
Full=Cardiac transcription factor 1; Short=CATF1;
AltName: Full=Immunoglobulin mu-binding protein 2
gi|293806|gb|AAA40143.1| DNA-binding protein [Mus musculus]
Length = 993
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 290/649 (44%), Positives = 413/649 (63%), Gaps = 28/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + +L Q +G +L L+ +TGL G
Sbjct: 2 ASSTVESFVAQQLQLLELERDAEVEERRSWQEHSSLRELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ K VLP++ F + D+V L + L GV+ R+ S+TVAFD
Sbjct: 62 QRLVTFEPRKFGPAVVLPSNSFTSGDIVGLYDTNEN---SQLATGVLTRITQKSVTVAFD 118
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + LN + RL KLAN+VTY+R+K AL+ L K +GPA+ LI +L G P+
Sbjct: 119 ESHDLQLNLDRENTYRLLKLANDVTYKRLKKALMTLKK-YHSGPASSLIDILLGSSTPSP 177
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ +N+ LD SQK+A+S AL+ K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 178 AMEIPPLSFYNTTLDLSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 237
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL V +LDA + R DN+ + +DIR+
Sbjct: 238 LCCAPSNIAVDNLVERLALCKKRILRLGHPARLLESVQHHSLDAVLARSDNAQIVADIRR 297
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + GK KT+DK + + E++ L KE ++R++ A+ + ADVVL T TGA S
Sbjct: 298 DIDQVFGKNKKTQDKREKGNFRSEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASSD 357
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L FD+V++DE AQALE +CWI LLK +CILAGDH QLPPT S A GL
Sbjct: 358 GPLKLLPEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTVSHRAALAGL 417
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
R+L ERLA+ +G V MLTVQYRMH+ IM W+S+ +Y+ + +HPS GV
Sbjct: 418 SRSLMERLAEKHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQFTSHPSVAGHLLKDLPGV 477
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLLID AGC + E ++E+ S N GE + H + L+ +GV A DI +I
Sbjct: 478 TDTEETRVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVI 537
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
PY QV LL+ +S +K +E+ +VDGFQGREKEA++++ VRSN K EVGFL++ RR
Sbjct: 538 APYNLQVDLLR--QSLSNKHPELEIKSVDGFQGREKEAVLLTFVRSNRKGEVGFLAEDRR 595
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FL+ L++YF EH E + EYL++
Sbjct: 596 INVAVTRARRHVAVICDSHTVNNHAFLETLVDYFTEHGEVRTAFEYLDD 644
>gi|109105146|ref|XP_001117732.1| PREDICTED: DNA-binding protein SMUBP-2-like [Macaca mulatta]
Length = 920
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 293/649 (45%), Positives = 420/649 (64%), Gaps = 27/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK-GDV--LPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + G V LP++ F + D+V L + A+ GS L G++ R+ S+TVAFD
Sbjct: 62 RLLVTFEPRRCGSVAALPSNSFTSGDIVGLY-DAANEGS-QLATGILTRVTQKSVTVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ + RL KLAN+VTYRR+K LI L K +GPA+ LI VLFG P+
Sbjct: 120 ESHDFQLSLDRENSYRLLKLANDVTYRRLKKTLIALKK-YHSGPASSLIEVLFGRSAPSS 178
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ FN++LD SQK+A+S ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 179 ASEIHPLTFFNTSLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 238
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL + + +LDA V R D++ + +DIRK
Sbjct: 239 LCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVVARSDSAQIVADIRK 298
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + K KT+DK + + E++ L KE + R++ A+ + + +A+VVL T TGA +
Sbjct: 299 DIDQVFVKNKKTQDKREKSNFRNEVKLLRKELKGREEAAILESLTSANVVLATNTGASAD 358
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPTV S +A GL
Sbjct: 359 GPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTVVSHKAALAGL 418
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ YG LTVQYRMH+ IM W+S +Y+ ++ AHPS GV
Sbjct: 419 SLSLMERLAEEYGARAVRTLTVQYRMHQAIMRWASDTMYHGQLTAHPSVAGHLLRDLPGV 478
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D A C + E ++E E S N GE + H + L+ +GV A D+ ++
Sbjct: 479 AATEETGVPLLLVDTASCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDVAVV 538
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
+PY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 539 SPYNLQVDLLR--QSLAHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 596
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 597 INVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 645
>gi|74191771|dbj|BAE32841.1| unnamed protein product [Mus musculus]
Length = 1066
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 290/652 (44%), Positives = 415/652 (63%), Gaps = 28/652 (4%)
Query: 8 EKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTG 67
E+ ++ +++ FV+ L++LE++AE+ + +L Q +G +L L+ +TG
Sbjct: 72 EQMASSTVESFVAQQLQLLELERDAEVEERRSWQEHSSLRELQSRGVCLLKLQVSSQRTG 131
Query: 68 LMGKTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITV 124
L G+ L+ F+ + VLP++ F + D+V L + L GV+ R+ S+TV
Sbjct: 132 LYGQRLVTFEPREFGPAVVLPSNSFTSGDIVGLYDTNEN---SQLATGVLTRITQKSVTV 188
Query: 125 AFDDIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQK 180
AFD+ + LN + RL KLAN+VTY+R+K AL+ L K +GPA+ LI +L G
Sbjct: 189 AFDESHDLQLNLDRENTYRLLKLANDVTYKRLKKALMTLKK-YHSGPASSLIDILLGSST 247
Query: 181 PTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG 240
P+ + +N+ LD SQK+A+S AL+ K + ++HGPPGTGKTTTVVEIILQ VK+G
Sbjct: 248 PSPAMEIPPLSFYNTTLDLSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQG 307
Query: 241 SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
K+L CA SNIAVDN+VERL + R++RLGHPARLL V +LDA + R DN+ + +D
Sbjct: 308 LKVLCCAPSNIAVDNLVERLALCKKRILRLGHPARLLESVQHHSLDAVLARSDNAQIVAD 367
Query: 301 IRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA 360
IR+++ + GK KT+DK + + E++ L KE ++R++ A+ + ADVVL T TGA
Sbjct: 368 IRRDIDQVFGKNKKTQDKREKGNFRSEIKLLRKELKEREEAAIVQSLTAADVVLATNTGA 427
Query: 361 VS----RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEK 416
S + L FD+V++DE AQALE +CWI LLK +CILAGDH QLPPT S A
Sbjct: 428 SSDGPLKLLPEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTVSHRAAL 487
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS--------- 467
GL R+L ERLA+ +G V MLTVQYRMH+ IM W+S+ +Y+ ++ +HPS
Sbjct: 488 AGLSRSLMERLAEKHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQLTSHPSVAGHLLKDL 547
Query: 468 -GVKRTSSTEPTLLLIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHASDI 525
GV T T LLLID AGC + E ++E+ S N E + H + L+ +GV A DI
Sbjct: 548 PGVTDTEETRVPLLLIDTAGCGLLELEEEDSQSKGNPSEVRLVTLHIQALVDAGVQAGDI 607
Query: 526 GIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSD 585
+I PY QV LL+ +S +K +E+ +VDGFQGREKEA++++ VRSN K EVGFL++
Sbjct: 608 AVIAPYNLQVDLLR--QSLSNKHPELEIKSVDGFQGREKEAVLLTFVRSNRKGEVGFLAE 665
Query: 586 RRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
RR+NVAVTRARR ++CD+ TV++ FLK L++YF EH E + EYL++
Sbjct: 666 DRRINVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEVRTAFEYLDD 717
>gi|405955090|gb|EKC22334.1| DNA-binding protein SMUBP-2 [Crassostrea gigas]
Length = 997
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 300/648 (46%), Positives = 409/648 (63%), Gaps = 42/648 (6%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
+SL++FV+ L+D E+EAEI + + Q++G +L L +TG G+T
Sbjct: 1 MSLEKFVNQHIQLLDKEREAEIEETRHVNETLPPKELQRRGVCLLKLHIRSRRTGFYGRT 60
Query: 73 LLEFQSTKG-DVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDD--- 128
++ F+ LPAH D+V L + A G G G+V S+I+VAFDD
Sbjct: 61 VVTFEPGGALQELPAHNITPGDIVSLTASSAHQGDEGFGSGIVTHAGKSAISVAFDDKED 120
Query: 129 ---IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGE---QKPT 182
+ EE L +L KLAN+VTY+R+K+AL L KG G ++ L+ VLFGE P
Sbjct: 121 LYDLQEEDL---YKLTKLANDVTYKRLKNALNNLKKG-DFGGSSRLVDVLFGETDLSSPY 176
Query: 183 VLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSK 242
LK DI NS LD SQ+DA+ AL+ V ++HGPPGTGKTTTV+EII+Q +K+G+K
Sbjct: 177 NLK-DIHL--VNSGLDESQEDAVRFALAQPEVAIVHGPPGTGKTTTVIEIIIQAIKQGNK 233
Query: 243 ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR 302
ILACA SNIAVDN+VERL H+ ++VRLGHPAR+LP + + +LDA + + + L D+R
Sbjct: 234 ILACAPSNIAVDNLVERLAQHKQKVVRLGHPARVLPHIQKYSLDAILSSSEETRLVEDVR 293
Query: 303 KEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS 362
K++ + KT+D +++I+++++ L KE R+R++ A +V+K ADVVL TL+ A
Sbjct: 294 KDLDKNLSAIRKTRDHGEKQKIREDVKYLRKELRQREEAASKEVLKRADVVLATLSSADP 353
Query: 363 ----RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKG 418
R LDN FDLV+IDE +QA+E ACWI LL+ RC+LAGDHLQLPPT+ S EA G
Sbjct: 354 RGPIRYLDNEHFDLVVIDECSQAVEAACWIPLLRAPRCVLAGDHLQLPPTILSKEAASAG 413
Query: 419 LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------G 468
L TL ERL DLYG +V MLT QYRMH+ IM WSS QLY K+ AH S
Sbjct: 414 LETTLMERLLDLYGGKVMRMLTTQYRMHQLIMQWSSDQLYEGKLTAHSSVATHLLRDIEK 473
Query: 469 VKRTSSTEPTLLLIDIAGCDMEE-KKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGI 527
V+ T T LLLID AGC + E EE S NEGEA++ +H ++LI+ G++ +I
Sbjct: 474 VEETEETSEPLLLIDTAGCQLYELDVPEEISKGNEGEADIVSSHVEKLIKLGLNQEEIA- 532
Query: 528 ITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
V LL++ S D +E+ +VDGFQGREKEA+IISMVRSN K EVGFL+++R
Sbjct: 533 -------VELLRLRLSND--YPKVEIKSVDGFQGREKEAVIISMVRSNMKGEVGFLAEKR 583
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
R+NVA+TRARR +VCD+ETV D FLK L++Y + + E++
Sbjct: 584 RINVAITRARRHLAVVCDSETVGHDAFLKSLVDYMSANGVVKTAQEFV 631
>gi|74214996|dbj|BAE33491.1| unnamed protein product [Mus musculus]
Length = 993
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 289/649 (44%), Positives = 413/649 (63%), Gaps = 28/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + +L Q +G +L L+ +TGL G
Sbjct: 2 ASSTVESFVAQQLQLLELERDAEVEERRSWQEHSSLRELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + VLP++ F + D+V L + L GV+ R+ S+TVAFD
Sbjct: 62 QRLVTFEPREFGPAVVLPSNSFTSGDIVGLYDTNEN---SQLATGVLTRITQKSVTVAFD 118
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + LN + RL KLAN+VTY+R+K AL+ L K +GPA+ LI +L G P+
Sbjct: 119 ESHDLQLNLDRENTYRLLKLANDVTYKRLKKALMTLKK-YHSGPASSLIDILLGSSTPSP 177
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ +N+ LD SQK+A+S AL+ K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 178 AMEIPPLSFYNTTLDLSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 237
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL V +LDA + R DN+ + +DIR+
Sbjct: 238 LCCAPSNIAVDNLVERLALCKKRILRLGHPARLLESVQHHSLDAVLARSDNAQIVADIRR 297
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + GK KT+DK + + E++ L KE ++R++ A+ + ADVVL T TGA S
Sbjct: 298 DIDQVFGKNKKTQDKREKGNFRSEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASSD 357
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L FD+V++DE AQALE +CWI LLK +CILAGDH QLPPT S A GL
Sbjct: 358 GPLKLLPEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTVSHRAALAGL 417
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
R+L ERLA+ +G V MLTVQYRMH+ IM W+S+ +Y+ ++ +HPS GV
Sbjct: 418 SRSLMERLAEKHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQLTSHPSVAGHLLKDLPGV 477
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLLID AGC + E ++E+ S N E + H + L+ +GV A DI +I
Sbjct: 478 TDTEETRVPLLLIDTAGCGLLELEEEDSQSKGNPSEVRLVTLHIQALVDAGVQAGDIAVI 537
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
PY QV LL+ +S +K +E+ +VDGFQGREKEA++++ VRSN K EVGFL++ RR
Sbjct: 538 APYNLQVDLLR--QSLSNKHPELEIKSVDGFQGREKEAVLLTFVRSNRKGEVGFLAEDRR 595
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L++YF EH E + EYL++
Sbjct: 596 INVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEVRTAFEYLDD 644
>gi|431910166|gb|ELK13239.1| DNA-binding protein SMUBP-2 [Pteropus alecto]
Length = 984
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 293/648 (45%), Positives = 412/648 (63%), Gaps = 30/648 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
S+ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 SSAAVESFVTKQLDLLELERDAEVEERRSWQETVSLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + LP++ F + D+V L L + GV+ R+ S+TVAFD
Sbjct: 62 RLLVTFEPRRCVSAGALPSNSFASGDIVGLYDEGGQLAT-----GVLTRVTQKSVTVAFD 116
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ RL KLAN+VTY+R+K ALI L K +GPA+ LI VLFG + P+
Sbjct: 117 ESHDFQLSLDQEKSYRLLKLANDVTYKRLKRALITLKK-YHSGPASSLIEVLFGGRAPSP 175
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ N++LD SQK+A+S ALS K + ++HGPPGTGKTTTVVEII+Q VK+G K+
Sbjct: 176 ASEIPPPVLINASLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIIVQAVKQGCKV 235
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SN AVDN++ERL +R++RLGHPARLL V + LD + RGD++ + +DIR+
Sbjct: 236 LCCAPSNTAVDNLLERLARCGLRVLRLGHPARLLGSVQQHCLDEVLARGDSAPIIADIRR 295
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ K KT+DK R +++ E++ L KE R+R++ A+ + AD VL T TGA
Sbjct: 296 DIYQALVKNKKTQDKRERSDLRNEVKLLRKELREREEAAMLQSLTAADAVLATNTGASDD 355
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L ++ FD+V+IDE +QALE +CWI LLK +CILAGDH QLPPT S +A GL
Sbjct: 356 GPLKLLPDSYFDMVVIDECSQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGL 415
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ YG LTVQYRMH+ IM W+S+ LY+ ++ AHPS GV
Sbjct: 416 SLSLMERLAEAYGAGTVRTLTVQYRMHQAIMQWASEALYHGQLTAHPSVAGHLLRDLPGV 475
Query: 470 KRTSSTEPTLLLIDIAGCD-MEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC +E++ D + S N GE + H + L+ +GV ASDI +I
Sbjct: 476 AATEETGIPLLLVDTAGCGLLEQEGDGDQSKGNPGEVRLVGLHVQALVDAGVRASDIAVI 535
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
+PY QV LL+ +S K +E+ +VDGFQGREKEA+++S VRSN K EVGFL++ RR
Sbjct: 536 SPYNLQVDLLR--QSLSHKHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRR 593
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLN 636
+NVAVTRARR LVCD+ TVS+ FL+ L+ YF EHAE S EYL+
Sbjct: 594 INVAVTRARRHVALVCDSRTVSNHAFLQTLVAYFTEHAEVRSAFEYLD 641
>gi|351709407|gb|EHB12326.1| DNA-binding protein SMUBP-2 [Heterocephalus glaber]
Length = 982
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 288/649 (44%), Positives = 417/649 (64%), Gaps = 27/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FVS L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVETFVSKQLYLLELERDAEVQERRSWQENISLKELQSQGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTKGD---VLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + VLP++ F + D+V L + + G L G++ R+ S++VAFD
Sbjct: 62 RLLVTFEPRRCGSVAVLPSNSFTSGDIVGLYDSANEGGQ--LATGILTRITQRSVSVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L + RL KLAN+VTY+R+K AL+ L K +GPA+ LI VLFG P+
Sbjct: 120 ESHDFHLTLDRENLYRLLKLANDVTYKRLKKALVALKK-YHSGPASPLIEVLFGGSAPSP 178
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+K +N+ LD SQK+A+S ALS K + ++HGPPGTGKTTTVVE+ILQ VK+G K+
Sbjct: 179 AQKISPLTFYNTTLDPSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEVILQTVKQGLKV 238
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL + + LDA + R D++ + +DIRK
Sbjct: 239 LCCAPSNIAVDNLVERLARCKQRILRLGHPARLLESIQQHCLDAVLSRSDSAQIVADIRK 298
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + K KT+DK + + E++ L KE ++R++ A+ + + A VVL T TGA +
Sbjct: 299 DIDQVFVKNKKTQDKKDKSNFRNEIKLLRKELKEREEAAMVESLTEASVVLATNTGASAD 358
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L + FD+V+IDE QALE +CWI LLK +CILAGDH QLPPT S +A ++GL
Sbjct: 359 GPLKLLPESYFDVVVIDECGQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAAQEGL 418
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ +GD V LTVQYRMH+ IM W+S+ +Y ++ AHPS GV
Sbjct: 419 SLSLMERLAEEHGDRVVRTLTVQYRMHQAIMRWASEAMYRGQLTAHPSVVGHLLRDLPGV 478
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D A C + E ++E E S N GE + H + L+ +GV A DI +I
Sbjct: 479 AATEETGIPLLLVDTASCGLFELEEEDEQSRGNPGEVRLVSMHIQALVDAGVQAGDIAVI 538
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
TPY QV LL+ +S K +E+ +VDGFQGREKEA+++S VRSN K EVGFL++ RR
Sbjct: 539 TPYNLQVDLLR--QSLGHKHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEERR 596
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L++YF +H E + EYL++
Sbjct: 597 INVAVTRARRHVAVICDSRTVNTHPFLKTLVDYFTKHGEVRTAFEYLDD 645
>gi|62089469|gb|AAH00290.1| IGHMBP2 protein, partial [Homo sapiens]
Length = 868
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 292/649 (44%), Positives = 418/649 (64%), Gaps = 27/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + LP++ F + D+V L + A+ GS L G++ R+ S+TVAFD
Sbjct: 62 RLLVTFEPRRYGSAAALPSNSFTSGDIVGLY-DAANEGS-QLATGILTRVTQKSVTVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ + RL KLAN+VTYRR+K ALI L K +GPA+ LI VLFG P+
Sbjct: 120 ESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKK-YHSGPASSLIEVLFGRSAPSP 178
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ FN+ LD SQK+A+S ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 179 ASEIHPLTFFNTCLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 238
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL + + +LDA + R D++ + +DIRK
Sbjct: 239 LCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRK 298
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + K KT+DK + + E++ L KE ++R++ A+ + + +A+VVL T TGA +
Sbjct: 299 DIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASAD 358
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT S +A GL
Sbjct: 359 GPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGL 418
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ YG V LTVQYRMH+ IM W+S +Y ++ AH S GV
Sbjct: 419 SLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGV 478
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A DI ++
Sbjct: 479 AATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVV 538
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
+PY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 539 SPYNLQVDLLR--QSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 596
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 597 INVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 645
>gi|410220680|gb|JAA07559.1| immunoglobulin mu binding protein 2 [Pan troglodytes]
Length = 997
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 292/649 (44%), Positives = 418/649 (64%), Gaps = 27/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + LP++ F + D+V L + A+ GS L G++ R+ S+TVAFD
Sbjct: 62 RLLVTFEPRRCGSAAALPSNSFTSGDIVGLY-DAANEGS-QLATGILTRVTQKSVTVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ + RL KLAN+VTYRR+K ALI L K +GPA+ LI VLFG P+
Sbjct: 120 ESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKK-YHSGPASSLIEVLFGRSAPSP 178
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ FN+ LD SQK+A+S ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 179 ASEIHPLTFFNTCLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 238
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL + + +LDA + R D++ + +DIRK
Sbjct: 239 LCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRK 298
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + K KT+DK + + E++ L KE ++R++ A+ + + +A+VVL T TGA +
Sbjct: 299 DIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASAD 358
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT S +A GL
Sbjct: 359 GPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGL 418
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ YG V LTVQYRMH+ IM W+S +Y ++ AH S GV
Sbjct: 419 SLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVAGHLLRDLPGV 478
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A DI ++
Sbjct: 479 AATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVV 538
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
+PY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 539 SPYNLQVDLLR--QSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 596
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 597 INVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 645
>gi|390356226|ref|XP_003728733.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2-like
[Strongylocentrotus purpuratus]
Length = 1100
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 293/665 (44%), Positives = 416/665 (62%), Gaps = 50/665 (7%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
S+ EFV L+D+E++AEI + ++ +++G +L L+C TGL G+T+
Sbjct: 3 SIGEFVRKHLDLLDVERQAEIEQTSDLLGKLSVRELERRGVCLLKLRCASQATGLYGRTV 62
Query: 74 LEFQSTKGD----VLPAHKFGTHDVVVLKPNKADLGSPAL-GQGVVYRLKDSSITVAFDD 128
L F+ + LPAH FG D+ + + +D S +L G+V ++ SSI VAF++
Sbjct: 63 LTFEPLRSQGQEGKLPAHNFGPGDIAGVSHSNSDTTSSSLLASGIVSKVTGSSIAVAFEE 122
Query: 129 IPE---EGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQ---KPT 182
E G + +L KLAN+VTY+R+K AL +L + + GPA LI VLFGE P
Sbjct: 123 NVEGIARGHDDTYKLTKLANDVTYKRLKKALHELEE-YRTGPAVRLIEVLFGESDLGSPV 181
Query: 183 VL-------KKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQ 235
L + + F FN+NL+ SQ+DA++ AL + V ++HGPPGTGKTTTVVE+I Q
Sbjct: 182 SLPANKNPGSESVEF--FNANLNESQRDAVTFALCQREVAVIHGPPGTGKTTTVVEVIQQ 239
Query: 236 EVKRGSKILACAASNIAVDNIVERLVPH-RVRLVRLGHPARLLPQVLESALDAQVLRGDN 294
VK+ KILACAASN+AVDN++ERL + +VRLGHPARLLP + ALDA + D
Sbjct: 240 AVKQNMKILACAASNVAVDNLLERLSANASCSMVRLGHPARLLPSIQRFALDAILASSDG 299
Query: 295 SSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVL 354
+S+ DIR+++ ++ KTKDK+ + ++ E++ L K+ + R+Q A+ D++ ADVVL
Sbjct: 300 ASIVRDIRRDLDTTLSQIRKTKDKDEKHRLKDEMKYLRKDLKSREQKAIQDILMAADVVL 359
Query: 355 TTLTGAVS----RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQ 410
T T A + R L FDLV+IDE AQ+LE ACWI LL +C+LAGDH QLP T+
Sbjct: 360 ATNTSASTNGPLRALQQGHFDLVVIDECAQSLEAACWIPLLNARKCLLAGDHHQLPATIM 419
Query: 411 SVE---------AEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSK 461
S + A K+GL ++ ER+ DLYG+ V MLT QYRM++ IM WSS QLY+ K
Sbjct: 420 SKQXKXKETCFTAAKEGLATSMMERIIDLYGNRVVQMLTTQYRMNDEIMRWSSDQLYDGK 479
Query: 462 IKAH-----------PSGVKRTSSTEPTLLLIDIAGCD-MEEKKDEEDSTMNEGEAEVAM 509
+++H P ++ ++T P LLLID AGCD +E + ++E S NEGEA++
Sbjct: 480 LQSHQSVATHLLKDMPCIMENENTTLP-LLLIDTAGCDVLELELEDEVSKGNEGEADIVS 538
Query: 510 AHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIII 569
H LI SG+ + I +I PY QV LL++ S K +E+ +VDGFQGREKEA++I
Sbjct: 539 HHVSNLISSGLSPAKIAVIAPYNLQVDLLRLRLS--SKYPGLEIKSVDGFQGREKEAVVI 596
Query: 570 SMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYL 629
S+VRSN + EVGFL + RR+NVA+TRARR +VCD++TV FLK L++YF +H E
Sbjct: 597 SLVRSNDRGEVGFLKEDRRINVAITRARRHLAVVCDSQTVGKHPFLKSLVDYFNDHGEVR 656
Query: 630 SGSEY 634
+ EY
Sbjct: 657 TAFEY 661
>gi|189069122|dbj|BAG35460.1| unnamed protein product [Homo sapiens]
Length = 993
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 292/649 (44%), Positives = 418/649 (64%), Gaps = 27/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + LP++ F + D+V L + A+ GS L G++ R+ S+TVAFD
Sbjct: 62 RLLVTFEPRRYGSAAALPSNSFTSGDIVGLY-DAANEGS-QLATGILTRVTQKSVTVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ + RL KLAN+VTYRR+K ALI L K +GPA+ LI VLFG P+
Sbjct: 120 ESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKK-YHSGPASSLIEVLFGRSAPSP 178
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ FN+ LD SQK+A+S ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 179 ASEIHPLTFFNTCLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 238
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL + + +LDA + R D++ + +DIRK
Sbjct: 239 LCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRK 298
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + K KT+DK + + E++ L KE ++R++ A+ + + +A+VVL T TGA +
Sbjct: 299 DIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASAD 358
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT S +A GL
Sbjct: 359 GPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGL 418
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ YG V LTVQYRMH+ IM W+S +Y ++ AH S GV
Sbjct: 419 SLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGV 478
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A DI ++
Sbjct: 479 AATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVV 538
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
+PY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 539 SPYNLQVDLLR--QSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 596
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 597 INVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 645
>gi|85397213|gb|AAI05091.1| Immunoglobulin mu binding protein 2 [Homo sapiens]
gi|85397939|gb|AAI05089.1| Immunoglobulin mu binding protein 2 [Homo sapiens]
Length = 993
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 292/649 (44%), Positives = 418/649 (64%), Gaps = 27/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + LP++ F + D+V L + A+ GS L G++ R+ S+TVAFD
Sbjct: 62 RLLVTFEPRRYGSAAALPSNSFTSGDIVGLY-DAANEGS-QLATGILTRVTQKSVTVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ + RL KLAN+VTYRR+K ALI L K +GPA+ LI VLFG P+
Sbjct: 120 ESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKK-YHSGPASSLIEVLFGRSAPSP 178
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ FN+ LD SQK+A+S ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 179 ASEIHPLTFFNTCLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 238
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL + + +LDA + R D++ + +DIRK
Sbjct: 239 LCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRK 298
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + K KT+DK + + E++ L KE ++R++ A+ + + +A+VVL T TGA +
Sbjct: 299 DIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASAD 358
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT S +A GL
Sbjct: 359 GPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGL 418
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ YG V LTVQYRMH+ IM W+S +Y ++ AH S GV
Sbjct: 419 SLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGV 478
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A DI ++
Sbjct: 479 AATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVV 538
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
+PY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 539 SPYNLQVDLLR--QSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 596
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 597 INVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 645
>gi|348505663|ref|XP_003440380.1| PREDICTED: DNA-binding protein SMUBP-2 [Oreochromis niloticus]
Length = 995
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 298/647 (46%), Positives = 413/647 (63%), Gaps = 28/647 (4%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
++L++FVS L+ E+EAEI + + +L Q KG +L L+ TGL G+T
Sbjct: 1 MALEKFVSKTLELLQEEREAEIEETRVWQENISLKDLQNKGVCLLKLQIGSQSTGLYGRT 60
Query: 73 LLEFQSTKG---DVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDI 129
++ + K LP++ FG D+V L + + G+V R+ +SI+VAFDD+
Sbjct: 61 VVILEPRKHLGFSSLPSNSFGPGDIVGLYDTTGCAAASQISTGIVTRVGQASISVAFDDL 120
Query: 130 PE-EGLNSP--LRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
+ +S L KLAN+VTY+RMK AL L+ G NGPA+ LI VLFG+ KPT +
Sbjct: 121 KDGHSFDSDALYNLLKLANDVTYKRMKRALNTLN-GYNNGPASNLISVLFGDTKPTSQSQ 179
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILAC 246
+ FNSNLD SQ++A+S ALS + + ++HGPPGTGKTTTVVEIILQ VK G K+L C
Sbjct: 180 PNKVEFFNSNLDDSQREAVSFALSQRELAVIHGPPGTGKTTTVVEIILQAVKHGQKVLCC 239
Query: 247 AASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEM- 305
A SN+AVDN+VERL + +++RLGHPARLL + + +LDA + + DN+++ ++IRK++
Sbjct: 240 APSNVAVDNLVERLAQCKAKVLRLGHPARLLESIQKHSLDAILAQSDNANIIAEIRKDID 299
Query: 306 KALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS--- 362
KA G K+K R +++E+ L KE + R+ A+ ++K+ADVVL+T TGA
Sbjct: 300 KAFTG---MKKEKGERGNLKREIGELRKELKNRETAAIAQILKSADVVLSTNTGACDDGP 356
Query: 363 -RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGR 421
+ L FD V+IDE AQALE +CWIALL+ +CILAGD+ QLPPT++S A KGL
Sbjct: 357 LKFLPAEHFDWVVIDECAQALESSCWIALLRARKCILAGDYKQLPPTIKSQMAASKGLSL 416
Query: 422 TLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKR 471
+L ERL +YGD V MLTVQYRM+ IM W+SK++Y ++ AH S GV
Sbjct: 417 SLMERLIQMYGDSVVRMLTVQYRMNSAIMQWASKEMYQGRLTAHSSVEGHLLKDLAGVAC 476
Query: 472 TSSTEPTLLLIDIAGCDMEEKK-DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITP 530
T LLLID AGC + E + +E S N GE ++ H K L ++GV A DI +I P
Sbjct: 477 VEETSTPLLLIDTAGCGLSEMEVADEQSKGNTGEVDIVDLHIKALTEAGVKAKDIAVIAP 536
Query: 531 YAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
Y QV LL+ S K +E+ +VDGFQGREKEA+++S+VRSN K EVGFL++ RR+N
Sbjct: 537 YNLQVDLLRQKLSA--KHPELEIKSVDGFQGREKEAVVLSLVRSNRKGEVGFLAEDRRIN 594
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
VAVTRARR +VCDT+TV + GFLK LI++ E E + EY+ +
Sbjct: 595 VAVTRARRHIAVVCDTQTVQNHGFLKSLIDHMTEFGEVRTAFEYIQD 641
>gi|119595135|gb|EAW74729.1| immunoglobulin mu binding protein 2 [Homo sapiens]
Length = 993
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 292/649 (44%), Positives = 418/649 (64%), Gaps = 27/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + LP++ F + D+V L + A+ GS L G++ R+ S+TVAFD
Sbjct: 62 RLLVTFEPRRYGSAAALPSNSFTSGDIVGLY-DAANEGS-QLATGILTRVTQKSVTVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ + RL KLAN+VTYRR+K ALI L K +GPA+ LI VLFG P+
Sbjct: 120 ESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKK-YHSGPASSLIEVLFGRSAPSP 178
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ FN+ LD SQK+A+S ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 179 ASEIHPLTFFNTCLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 238
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL + + +LDA + R D++ + +DIRK
Sbjct: 239 LCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRK 298
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + K KT+DK + + E++ L KE ++R++ A+ + + +A+VVL T TGA +
Sbjct: 299 DIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASAD 358
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT S +A GL
Sbjct: 359 GPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGL 418
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ YG V LTVQYRMH+ IM W+S +Y ++ AH S GV
Sbjct: 419 SLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGV 478
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A DI ++
Sbjct: 479 AATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVV 538
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
+PY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 539 SPYNLQVDLLR--QSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 596
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 597 INVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 645
>gi|301787841|ref|XP_002929345.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2-like
[Ailuropoda melanoleuca]
Length = 995
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 293/649 (45%), Positives = 416/649 (64%), Gaps = 30/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
+ +++ FV+ L++LE++AE+ + + + Q +G +L L+ +TGL G
Sbjct: 2 ATAAVESFVTKQLDLLELERDAEVEERRSWQENISPKELQSRGVCLLKLQASSQRTGLYG 61
Query: 71 KTLLEFQ---STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ T VLP++ F + D+V L D GS L G++ R+ S+TVAFD
Sbjct: 62 RLLVTFEPRRCTSAPVLPSNSFTSGDIVGLY----DEGS-QLATGILTRITQRSVTVAFD 116
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ RL KLAN+VTY+R+K AL+ L K +GPA+ LI VLFG P+
Sbjct: 117 ESHDFQLSLDREQSYRLLKLANDVTYKRLKKALVTLKK-YHSGPASSLIEVLFGGSAPSP 175
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ N++LD SQK+A+S ALS K + ++HGPPGTGKTTTVVEIILQ V++G K+
Sbjct: 176 ASEIQPPLFCNASLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVRQGLKV 235
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL + + +LDA + R DN+ + +DIRK
Sbjct: 236 LCCAPSNIAVDNLVERLARCKQRILRLGHPARLLESIQQHSLDAVLARSDNAQIVADIRK 295
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ K +T+DK + + E++ L KE ++R++ A+ + + +A VVL T TGA S
Sbjct: 296 DIDQAFAKNRQTQDKREKSSVWSEIKLLRKELKEREEAAMLESLTSAAVVLATNTGASSD 355
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L ++ FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT S +A GL
Sbjct: 356 GPLKLLPDSHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGL 415
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ +G V LTVQYRMH IM W+S LY+ ++ AHPS GV
Sbjct: 416 SLSLMERLAEEHGARVVRTLTVQYRMHRAIMQWASDALYHGQLTAHPSVAGHLLRDLPGV 475
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC + E ++E+D S N GE + H + L+ +GV ASDI +I
Sbjct: 476 AATEETGIPLLLVDTAGCGLFELEEEDDQSKGNPGEVRLVSLHIQALVDAGVQASDIAVI 535
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
TPY QV LL+ +S + +E+ +VDGFQGREKEA+++S VRSN K EVGFL++ RR
Sbjct: 536 TPYNLQVDLLR--QSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRR 593
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR +VCD+ TV++ FLK L+++F EH E + EYL++
Sbjct: 594 INVAVTRARRHVAVVCDSRTVNNHAFLKTLVDHFTEHGEVRTAFEYLDD 642
>gi|401776|gb|AAA53082.1| DNA-binding protein [Homo sapiens]
Length = 993
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 293/649 (45%), Positives = 417/649 (64%), Gaps = 27/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + LP++ F + D+V L + A+ GS L G++ R+ S+TVAFD
Sbjct: 62 RLLVTFEPRRYGSAAALPSNSFTSGDIVGLY-DAANEGS-QLATGILTRVTQKSVTVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ + RL KLAN+VTYRR+K ALI L K +GPA+ LI VLFG P+
Sbjct: 120 ESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKK-YHSGPASSLIEVLFGRSAPSP 178
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ FN+ LD SQK+A+S ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 179 ASEIHPLTFFNTCLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 238
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL V + +LDA + R D++ +DIRK
Sbjct: 239 LCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESVQQHSLDAVLARSDSAQNVADIRK 298
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + K KT+DK + + E++ L KE ++R++ A+ + + +A+VVL T TGA +
Sbjct: 299 DIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASAD 358
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT S +A GL
Sbjct: 359 GPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGL 418
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ YG V LTVQYRMH+ IM W+S +Y ++ AH S GV
Sbjct: 419 SLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQVTAHSSVARHLLRDLPGV 478
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A DI ++
Sbjct: 479 AATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVV 538
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
+PY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 539 SPYNLQVDLLR--QSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 596
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 597 INVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 645
>gi|332837111|ref|XP_508608.3| PREDICTED: DNA-binding protein SMUBP-2 [Pan troglodytes]
gi|410247290|gb|JAA11612.1| immunoglobulin mu binding protein 2 [Pan troglodytes]
gi|410295562|gb|JAA26381.1| immunoglobulin mu binding protein 2 [Pan troglodytes]
gi|410335665|gb|JAA36779.1| immunoglobulin mu binding protein 2 [Pan troglodytes]
Length = 1001
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 292/645 (45%), Positives = 415/645 (64%), Gaps = 27/645 (4%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G+ L+
Sbjct: 10 VESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYGRLLV 69
Query: 75 EFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPE 131
F+ + LP++ F + D+V L + A+ GS L G++ R+ S+TVAFD+ +
Sbjct: 70 TFEPRRCGSAAALPSNSFTSGDIVGLY-DAANEGS-QLATGILTRVTQKSVTVAFDESHD 127
Query: 132 EGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKD 187
L+ + RL KLAN+VTYRR+K ALI L K +GPA+ LI VLFG P+ +
Sbjct: 128 FQLSLDRENSYRLLKLANDVTYRRLKKALIALKK-YHSGPASSLIEVLFGRSAPSPASEI 186
Query: 188 IAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACA 247
FN+ LD SQK+A+S ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K+L CA
Sbjct: 187 HPLTFFNTCLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCA 246
Query: 248 ASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKA 307
SNIAVDN+VERL + R++RLGHPARLL + + +LDA + R D++ + +DIRK++
Sbjct: 247 PSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRKDIDQ 306
Query: 308 LNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS----R 363
+ K KT+DK + + E++ L KE ++R++ A+ + + +A+VVL T TGA + +
Sbjct: 307 VFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASADGPLK 366
Query: 364 KLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTL 423
L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT S +A GL +L
Sbjct: 367 LLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGLSLSL 426
Query: 424 FERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTS 473
ERLA+ YG V LTVQYRMH+ IM W+S +Y ++ AH S GV T
Sbjct: 427 MERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVAGHLLRDLPGVAATE 486
Query: 474 STEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYA 532
T LLL+D AGC + E ++E E S N GE + H + L+ +GV A DI +++PY
Sbjct: 487 ETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVVSPYN 546
Query: 533 AQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVA 592
QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR+NVA
Sbjct: 547 LQVDLLR--QSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVA 604
Query: 593 VTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
VTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 605 VTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 649
>gi|348565147|ref|XP_003468365.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cavia porcellus]
Length = 988
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 287/649 (44%), Positives = 423/649 (65%), Gaps = 27/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVETFVAKHLYLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTKGD---VLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + VLP++ F + D+V L + A+ G L G++ R+ S++VAFD
Sbjct: 62 RLLVTFEPRRCGPVAVLPSNSFTSGDIVGLY-DTANEGR-QLATGILTRITQKSVSVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L + RL KLAN+VTY+R+K AL+ L K +GPA+ LI VLFG P+
Sbjct: 120 ESHDFQLTLDRENFYRLLKLANDVTYKRLKKALVTLKK-YHSGPASSLIEVLFGGSDPSP 178
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
++ K +N+ LD SQK+A+S ALS K + ++HGPPGTGKTTTVVE+ILQ VK+G K+
Sbjct: 179 AQEIPPLKFYNTALDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEVILQAVKQGLKV 238
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SN+AVDN+VERL ++R++RLGHPARLL + + +LDA + R D++ + +DIRK
Sbjct: 239 LCCAPSNVAVDNLVERLALRKLRILRLGHPARLLEPIQQHSLDAVLARSDSAQIVADIRK 298
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + K KT++K + + E++ L KE ++R++ A+ + + A VVL T TGA
Sbjct: 299 DIDQIFVKNKKTQEKKDKSNFRSEIKQLRKELKEREEAAMVESLTAASVVLATNTGASPD 358
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L + FD+V+IDE QALE +CWI LLK +CILAGDH QLPPT S +A ++GL
Sbjct: 359 GPLKLLPESYFDVVVIDECGQALEASCWIPLLKARKCILAGDHKQLPPTTVSHQAAQEGL 418
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ +GD+V LTVQYRMH+ IM+W+S+ +Y ++ AH S GV
Sbjct: 419 SLSLMERLAEEHGDKVVRTLTVQYRMHQAIMHWASEAMYGGQLTAHSSVAGQLLRDLPGV 478
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D A C + E ++E+D S N GE + H + L+ +GV ASDI +I
Sbjct: 479 TATEETGIPLLLVDTASCGLFELEEEDDQSKGNPGEVRLVSLHIQALVDAGVQASDIAVI 538
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
TPY QV LL+ +S + K +E+ +VDGFQGREKEA+++S VRSN K EVGFL++ RR
Sbjct: 539 TPYNLQVDLLR--QSLEHKHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRR 596
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR LVCD+ TV++ FLK L++Y +H E + EYL++
Sbjct: 597 INVAVTRARRHVALVCDSRTVNNHPFLKTLVDYVTQHGEVRTAFEYLDD 645
>gi|358419774|ref|XP_003584325.1| PREDICTED: DNA-binding protein SMUBP-2 [Bos taurus]
gi|359081357|ref|XP_003588118.1| PREDICTED: DNA-binding protein SMUBP-2 [Bos taurus]
Length = 981
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 288/649 (44%), Positives = 411/649 (63%), Gaps = 30/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ ++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASTPVESFVTKQLELLELERDAEVEERRSWQENVSLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ + + VLP++ F + D+V L L + G++ R+ ++TVAFD
Sbjct: 62 RLLITLEPRRCVSAAVLPSNSFTSGDIVGLYDESGQLAT-----GILTRITQKAVTVAFD 116
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ RL KLAN+VTY+R+K ALI L K GPA+ LI VLFG P+
Sbjct: 117 ESHDSQLSLDQEHSYRLLKLANDVTYKRLKKALISLKKH-HAGPASSLIEVLFGASDPSP 175
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ N LD SQ++A+ ALS K + ++HGPPGTGKTTTVVEIILQ VKRGSK+
Sbjct: 176 PSEMPPLTFCNPALDASQQEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKRGSKV 235
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SN+AVDN+VERL + R++RLGHPARLL + + +LDA + R D++ + +DIR+
Sbjct: 236 LCCAPSNVAVDNLVERLAQWKQRILRLGHPARLLDSIQQHSLDAVLARSDSARIVADIRR 295
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ K KT+DK + + E++ L KE + R++ A+ + + A VVL T TGA +
Sbjct: 296 DIDQAWAKNRKTQDKREKSNFRDEIKLLRKELKDREEAAMLESLAAASVVLATNTGASAD 355
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L ++ FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT+ S +A GL
Sbjct: 356 GPLKLLPDSHFDMVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTIVSHKAALAGL 415
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ +G MLTVQYRMH+ I W+S+ LY+ ++ AHPS GV
Sbjct: 416 SLSLMERLAERHGAGALRMLTVQYRMHQAIARWASEALYHGQLTAHPSVAGHLLRDLPGV 475
Query: 470 KRTSSTEPTLLLIDIAGCD-MEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC +E ++D+E S N GE + H + L+ +GV A+DI +I
Sbjct: 476 AATEETGVPLLLVDTAGCGLLELEEDDEQSKGNPGEVRLVGLHVQALVDAGVRAADIAVI 535
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
TPY QV LL+ +S +L +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 536 TPYNLQVDLLR--QSLAHRLPELEIRSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 593
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR +VCD+ TVS+ FLK L++Y EH E + EYL++
Sbjct: 594 INVAVTRARRHVAVVCDSRTVSNHAFLKTLVDYLTEHGEVRTAFEYLDD 642
>gi|440894224|gb|ELR46730.1| DNA-binding protein SMUBP-2 [Bos grunniens mutus]
Length = 981
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 288/649 (44%), Positives = 411/649 (63%), Gaps = 30/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ ++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASTPVESFVTKQLELLELERDAEVEERRSWQENVSLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ + + VLP++ F + D+V L L + G++ R+ ++TVAFD
Sbjct: 62 RLLITLEPRRCVSAAVLPSNSFTSGDIVGLYDESGQLAT-----GILTRITQKAVTVAFD 116
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ RL KLAN+VTY+R+K ALI L K GPA+ LI VLFG P+
Sbjct: 117 ESHDSQLSLDQEHSYRLLKLANDVTYKRLKKALISLKKH-HAGPASSLIEVLFGASDPSP 175
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ N LD SQ++A+ ALS K + ++HGPPGTGKTTTVVEIILQ VKRGSK+
Sbjct: 176 PSETPPLTFCNPALDASQQEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKRGSKV 235
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SN+AVDN+VERL + R++RLGHPARLL + + +LDA + R D++ + +DIR+
Sbjct: 236 LCCAPSNVAVDNLVERLAQWKQRILRLGHPARLLDSIQQHSLDAVLARSDSARIVADIRR 295
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ K KT+DK + + E++ L KE + R++ A+ + + A+VVL T TGA +
Sbjct: 296 DIDQAWAKNRKTQDKREKSNFRDEIKLLRKELKDREEAAMLESLAAANVVLATNTGASAD 355
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L ++ FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT+ S +A GL
Sbjct: 356 GPLKLLPDSHFDMVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTIVSHKAALAGL 415
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ +G MLTVQYRMH+ I W+S+ LY+ ++ AHPS GV
Sbjct: 416 SLSLMERLAERHGAGALRMLTVQYRMHQAIARWASEALYHGQLTAHPSVAGHLLRDLPGV 475
Query: 470 KRTSSTEPTLLLIDIAGCD-MEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC +E ++D+E S N GE + H + L+ +GV A+DI +I
Sbjct: 476 AATEETGVPLLLVDTAGCGLLELEEDDEQSKGNPGEVRLVSLHVQALVDAGVRAADIAVI 535
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
TPY QV LL+ +S +L +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 536 TPYNLQVDLLR--QSLAHRLPELEIRSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 593
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR +VCD+ TVS+ FLK L+ Y EH E + EYL++
Sbjct: 594 INVAVTRARRHVAVVCDSRTVSNHAFLKTLVGYLTEHGEVRTAFEYLDD 642
>gi|406855654|pdb|4B3F|X Chain X, Crystal Structure Of 1ghmbp2 Helicase
Length = 646
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 291/648 (44%), Positives = 416/648 (64%), Gaps = 27/648 (4%)
Query: 12 AVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGK 71
+ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G+
Sbjct: 1 SAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYGR 60
Query: 72 TLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDD 128
L+ F+ + LP++ F + D+V L + A+ GS L G++ R+ S+TVAFD+
Sbjct: 61 LLVTFEPRRYGSAAALPSNSFTSGDIVGLY-DAANEGS-QLATGILTRVTQKSVTVAFDE 118
Query: 129 IPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVL 184
+ L+ + RL KLAN+VTYRR+K ALI L K +GPA+ LI VLFG P+
Sbjct: 119 SHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKK-YHSGPASSLIEVLFGRSAPSPA 177
Query: 185 KKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKIL 244
+ FN+ LD SQK+A+ ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K+L
Sbjct: 178 SEIHPLTFFNTCLDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVL 237
Query: 245 ACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKE 304
CA SNIAVDN+VERL + R++RLGHPARLL + + +LDA + R D++ + +DIRK+
Sbjct: 238 CCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRKD 297
Query: 305 MKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS-- 362
+ + K KT+DK + + E++ L KE ++R++ A+ + + +A+VVL T TGA +
Sbjct: 298 IDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASADG 357
Query: 363 --RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLG 420
+ L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT S +A GL
Sbjct: 358 PLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGLS 417
Query: 421 RTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVK 470
+L ERLA+ YG V LTVQYRMH+ IM W+S +Y ++ AH S GV
Sbjct: 418 LSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGVA 477
Query: 471 RTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIIT 529
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A DI +++
Sbjct: 478 ATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVVS 537
Query: 530 PYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRM 589
PY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR+
Sbjct: 538 PYNLQVDLLR--QSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRI 595
Query: 590 NVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
NVAVTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 596 NVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 643
>gi|296218993|ref|XP_002755681.1| PREDICTED: DNA-binding protein SMUBP-2 [Callithrix jacchus]
Length = 1008
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 291/649 (44%), Positives = 415/649 (63%), Gaps = 27/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + S +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKQLELLELERDAEVEERRSWQESISLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ + + LP++ F + D+V L + A GS L G++ R+ S+TVAFD
Sbjct: 62 RLLVTLEPRRCGSAAALPSNSFTSGDIVGLY-DAAHEGS-QLATGILTRVTPRSVTVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ + RL KLAN+VTY+R+K ALI L K +GPA+ LI VLFG P+
Sbjct: 120 ESHDFQLSLDRENSYRLLKLANDVTYKRLKKALIALKK-YHSGPASSLIEVLFGRSAPSP 178
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ FN+ LD SQK+A+S ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 179 ASEIGPLTFFNTCLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 238
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL + + +LDA + R D++ + +DIRK
Sbjct: 239 LCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRK 298
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + + KT+DK + + E++ L KE ++R++ A+ + + +A+VVL T TGA +
Sbjct: 299 DIDQVFVRNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASAD 358
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L FD+V+IDE AQALE +CWI LL+ RCILAGDH QLPPT S A GL
Sbjct: 359 GPLKLLPEGHFDMVVIDECAQALEASCWIPLLQAGRCILAGDHKQLPPTTVSHRAALAGL 418
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ YG V LTVQYRMH+ IM W+S+ +Y ++ AHPS GV
Sbjct: 419 SLSLMERLANEYGVSVVRTLTVQYRMHQAIMRWASEAMYLGQLTAHPSVAGHLLRDLPGV 478
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A DI ++
Sbjct: 479 AATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVV 538
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
+PY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 539 SPYNLQVDLLR--QSLAHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 596
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV+ FLK L+EYF +H E + EYL++
Sbjct: 597 INVAVTRARRHVAVICDSHTVNHHAFLKTLVEYFTQHGEVRTAFEYLDD 645
>gi|397517199|ref|XP_003828806.1| PREDICTED: DNA-binding protein SMUBP-2 [Pan paniscus]
Length = 1001
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 291/649 (44%), Positives = 418/649 (64%), Gaps = 27/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 6 ASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYG 65
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + LP++ F + D+V L + A+ GS L G++ R+ S+TVAFD
Sbjct: 66 RLLVTFEPRRCGSAAALPSNSFTSGDIVGLY-DAANEGS-QLATGILTRVTQKSVTVAFD 123
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ + RL KLAN+VTYRR+K ALI L K +GPA+ LI VLFG P+
Sbjct: 124 ESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKK-YHSGPASSLIEVLFGRSAPSP 182
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ FN+ LD SQK+A+S ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 183 ASEIHPLTFFNTCLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 242
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL + + +LDA + R D++ + +DIRK
Sbjct: 243 LCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRK 302
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + K KT++K + + E++ L KE ++R++ A+ + + +A+VVL T TGA +
Sbjct: 303 DIDQVFVKNKKTQNKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASAD 362
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT S +A GL
Sbjct: 363 GPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGL 422
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ YG V LTVQYRMH+ IM W+S +Y ++ AH S GV
Sbjct: 423 SLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVAGHLLRDLPGV 482
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A DI ++
Sbjct: 483 AATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVV 542
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
+PY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 543 SPYNLQVDLLR--QSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 600
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 601 INVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 649
>gi|118600271|gb|AAH25299.1| IGHMBP2 protein [Homo sapiens]
Length = 868
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 291/649 (44%), Positives = 417/649 (64%), Gaps = 27/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + LP++ F + D+V L + A+ GS L G++ R+ S+TVAFD
Sbjct: 62 RLLVTFEPRRYGSAAALPSNSFTSGDIVGLY-DAANEGS-QLATGILTRVTQKSVTVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ + RL KLAN+VTYRR+K ALI L K +GPA+ LI VLFG P+
Sbjct: 120 ESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKK-YHSGPASSLIEVLFGRSAPSP 178
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ FN+ LD SQK+A+ ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 179 ASEIHPLTFFNTCLDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 238
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL + + +LDA + R D++ + +DIRK
Sbjct: 239 LCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRK 298
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + K KT+DK + + E++ L KE ++R++ A+ + + +A+VVL T TGA +
Sbjct: 299 DIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASAD 358
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT S +A GL
Sbjct: 359 GPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGL 418
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ YG V LTVQYRMH+ IM W+S +Y ++ AH S GV
Sbjct: 419 SLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGV 478
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A DI ++
Sbjct: 479 AATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVV 538
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
+PY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 539 SPYNLQVDLLR--QSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 596
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 597 INVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 645
>gi|406855655|pdb|4B3G|A Chain A, Crystal Structure Of Ighmbp2 Helicase In Complex With Rna
gi|406855656|pdb|4B3G|B Chain B, Crystal Structure Of Ighmbp2 Helicase In Complex With Rna
Length = 646
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 291/648 (44%), Positives = 417/648 (64%), Gaps = 27/648 (4%)
Query: 12 AVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGK 71
+ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G+
Sbjct: 1 SAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYGR 60
Query: 72 TLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDD 128
L+ F+ + LP++ F + D+V L + A+ GS L G++ R+ S+TVAFD+
Sbjct: 61 LLVTFEPRRYGSAAALPSNSFTSGDIVGLY-DAANEGS-QLATGILTRVTQKSVTVAFDE 118
Query: 129 IP--EEGLN--SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVL 184
++ L+ + RL KLAN+VTYRR+K ALI L K +GPA+ LI VLFG P+
Sbjct: 119 SHDFQQSLDRENSYRLLKLANDVTYRRLKKALIALKK-YHSGPASSLIEVLFGRSAPSPA 177
Query: 185 KKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKIL 244
+ FN+ LD SQK+A+ ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K+L
Sbjct: 178 SEIHPLTFFNTCLDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVL 237
Query: 245 ACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKE 304
CA SNIAVDN+VERL + R++RLGHPARLL + + +LDA + R D++ + +DIRK+
Sbjct: 238 CCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRKD 297
Query: 305 MKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS-- 362
+ + K KT+DK + + E++ L KE ++R++ A+ + + +A+VVL T TGA +
Sbjct: 298 IDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASADG 357
Query: 363 --RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLG 420
+ L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT S +A GL
Sbjct: 358 PLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGLS 417
Query: 421 RTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVK 470
+L ERLA+ YG V LTVQYRMH+ IM W+S +Y ++ AH S GV
Sbjct: 418 LSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGVA 477
Query: 471 RTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIIT 529
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A DI +++
Sbjct: 478 ATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVVS 537
Query: 530 PYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRM 589
PY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR+
Sbjct: 538 PYNLQVDLLR--QSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRI 595
Query: 590 NVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
NVAVTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 596 NVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 643
>gi|426369511|ref|XP_004051731.1| PREDICTED: DNA-binding protein SMUBP-2 [Gorilla gorilla gorilla]
Length = 997
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 292/649 (44%), Positives = 417/649 (64%), Gaps = 27/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKQLDLLELERDAEVEERRSWQENVSLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + LP++ F + D+V L + A+ GS L G++ R+ S+ VAFD
Sbjct: 62 RLLVTFEPRRCGSAAALPSNSFTSGDIVGLY-DAANEGS-QLATGILTRVTQKSVMVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ + RL KLAN+VTYRR+K ALI L K +GPA+ LI VLFG P+
Sbjct: 120 ESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKK-YHSGPASSLIEVLFGRSAPSP 178
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ FN+ LD SQK+A+S ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 179 ASEIHPLTFFNTCLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 238
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL + + +LDA + R D++ + +DIRK
Sbjct: 239 LCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRK 298
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + K KT+DK + + E++ L KE ++R++ A+ + + +A+VVL T TGA +
Sbjct: 299 DIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASAD 358
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT S +A GL
Sbjct: 359 GPLKLLPKSHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGL 418
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ YG V LTVQYRMH+ IM W+S +Y ++ AH S GV
Sbjct: 419 SLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVAGHLLRDLPGV 478
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A DI +I
Sbjct: 479 AATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVLARDIAVI 538
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
+PY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 539 SPYNLQVDLLR--QSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 596
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 597 INVAVTRARRHVAIICDSHTVNNHAFLKTLVEYFIQHGEVRTAFEYLDD 645
>gi|119392094|ref|NP_002171.2| DNA-binding protein SMUBP-2 [Homo sapiens]
gi|317373494|sp|P38935.3|SMBP2_HUMAN RecName: Full=DNA-binding protein SMUBP-2; AltName:
Full=ATP-dependent helicase IGHMBP2; AltName: Full=Glial
factor 1; Short=GF-1; AltName: Full=Immunoglobulin
mu-binding protein 2
gi|908917|gb|AAA70430.1| DNA helicase [Homo sapiens]
Length = 993
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 291/649 (44%), Positives = 417/649 (64%), Gaps = 27/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + LP++ F + D+V L + A+ GS L G++ R+ S+TVAFD
Sbjct: 62 RLLVTFEPRRYGSAAALPSNSFTSGDIVGLY-DAANEGS-QLATGILTRVTQKSVTVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ + RL KLAN+VTYRR+K ALI L K +GPA+ LI VLFG P+
Sbjct: 120 ESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKK-YHSGPASSLIEVLFGRSAPSP 178
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ FN+ LD SQK+A+ ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 179 ASEIHPLTFFNTCLDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 238
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL + + +LDA + R D++ + +DIRK
Sbjct: 239 LCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRK 298
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + K KT+DK + + E++ L KE ++R++ A+ + + +A+VVL T TGA +
Sbjct: 299 DIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASAD 358
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT S +A GL
Sbjct: 359 GPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGL 418
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ YG V LTVQYRMH+ IM W+S +Y ++ AH S GV
Sbjct: 419 SLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGV 478
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A DI ++
Sbjct: 479 AATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVV 538
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
+PY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 539 SPYNLQVDLLR--QSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 596
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 597 INVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 645
>gi|412987690|emb|CCO20525.1| predicted protein [Bathycoccus prasinos]
Length = 849
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 302/712 (42%), Positives = 432/712 (60%), Gaps = 84/712 (11%)
Query: 3 GRKTKEKQSAVSL---QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKG---STI 56
R+T SAVS+ E+ + L++LE+ EI+ S+ + N T++KKG + +
Sbjct: 138 SRQTNASTSAVSITTISEWTTKTLHLLELERVEEIAQSLDA---LNTSTSKKKGQHKNAL 194
Query: 57 LNLKCVDAQTGLMGKTLLEFQSTKGDV--------LPAHKFGTHDVVVLKPNKADL---- 104
LK VDA+ GL+G+T++ + +K + LP H F HDVV L+P+
Sbjct: 195 DGLKIVDARGGLLGQTIVTLEVSKRKMTEKDFAPPLPTHSFTPHDVVRLRPSNVKFEEMS 254
Query: 105 -GSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGV 163
+ L QGV+YR++DSS+ +A DD+PE SPLRLEKL+NE T++++ A+ L +
Sbjct: 255 TSNSELPQGVIYRIRDSSVELALDDVPEFLDVSPLRLEKLSNEQTHKKLVLAVQGLQHAL 314
Query: 164 QNGPAAG--LIPVLFGEQKPTVLKKD----IAFKPFNSNLDHSQKDAISKALSSKNVFML 217
+G + G ++ ++F P ++ D + F PFN NLD SQK AI L +V ++
Sbjct: 315 ASGYSLGKNILEIVFESASPRIIHCDNANAVRFHPFNENLDCSQKSAIQLCLDCVDVGII 374
Query: 218 HGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRV------------ 265
HGPPGTGKTT VVE + QEV RG+++L C+ASN+AVDN+VERL +
Sbjct: 375 HGPPGTGKTTAVVEYVSQEVARGNRVLVCSASNVAVDNVVERLSGVSIFRTATVSVDNKK 434
Query: 266 --------------------------RLVRLGHPARLLPQVLESALDAQVLRGDNSSLAS 299
+VR GHPARL P VL+++LDA +LR D+S+LA
Sbjct: 435 KKGRRERKKKDLSVEIEILAVDDQSKTIVRYGHPARLAPAVLDASLDAYILRSDDSALAK 494
Query: 300 DIRKEMKALNGKL-----LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVL 354
+ ++ K + ++ K +D+ R ++++ELR L+KEE+KRQ+LA ++ A V+
Sbjct: 495 ECSEDSKKIRTRISKLDYRKKEDRAERNDLRRELRELAKEEKKRQKLAQAKTLEKASVIC 554
Query: 355 TTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA 414
TL GA+S L N FD+V++DEAAQALE A ++KG + +LAGDHLQLPPTV S EA
Sbjct: 555 ATLAGALSFALKNEEFDVVVVDEAAQALECAVLGVVMKGKKLVLAGDHLQLPPTVLSDEA 614
Query: 415 EKKGLGRTLFERLA--DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSK-IKAHPSGVKR 471
+KGL TLFERL +G ++T+ML QYRMHE IM WSS +Y+SK I A ++
Sbjct: 615 AQKGLSTTLFERLVRNKRFGAKITTMLNTQYRMHEDIMVWSSDAMYDSKLIAAESVRFRK 674
Query: 472 TSSTEPTLLLIDIAGCD---MEE-KKDEEDSTMNEGEAEVAMAHAKRLIQSG--VHASDI 525
+ L L+D G D ME D++DS N GEAE+ M ++ + + ++I
Sbjct: 675 FEQFDKVLTLVDTTGEDDSFMENVGDDDDDSKSNLGEAEIVMQTIEKFLSDAYKILPNEI 734
Query: 526 GIITPYAAQVVLLKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVG 581
G+ITPY+ QV LL+ +R+ ++ K++E+STVDGFQGREKEAIIIS VRSN EVG
Sbjct: 735 GVITPYSGQVSLLREMRAARAEENALFKDIEISTVDGFQGREKEAIIISTVRSNENNEVG 794
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSE 633
FLSD RRMNVAVTRAR+ L+C+ ETVS D FL L++YFEE+ E +S ++
Sbjct: 795 FLSDARRMNVAVTRARKHVTLICNCETVSKDTFLAHLVQYFEENGELVSSAQ 846
>gi|326919828|ref|XP_003206179.1| PREDICTED: DNA-binding protein SMUBP-2-like [Meleagris gallopavo]
Length = 980
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 280/617 (45%), Positives = 395/617 (64%), Gaps = 31/617 (5%)
Query: 45 NLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDV---LPAHKFGTHDVVVLKPN- 100
+L Q++G +L L+ + +TGL G+ L+ FQ K D LP + FG D+V L +
Sbjct: 32 SLKELQRRGVCLLKLQAANQRTGLYGRLLVTFQPRKYDSDAELPYNSFGPGDIVGLYDSV 91
Query: 101 -KADLGSPALGQGVVYRLKDSSITVAF----DDIPEEGLNSPLRLEKLANEVTYRRMKDA 155
+ DL L G+V R+ ++T+AF D + G S RL KLAN++TY R+K A
Sbjct: 92 GQGDL----LSTGIVTRVTSKAVTIAFEESRDGMLSVGHESSYRLLKLANDITYNRIKKA 147
Query: 156 LIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVF 215
L L K +GPA+ LI VLF P+ + K +N +LD SQ++A+S +L+ K V
Sbjct: 148 LNAL-KQYHSGPASDLIDVLFFSLDPSPSSETKPLKLYNDSLDASQREAVSFSLAQKEVA 206
Query: 216 MLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPAR 275
++HGPPGTGKTTT+VEIILQ V++G K+L CA SN+AVDN+VERL ++ R++RLGHPAR
Sbjct: 207 IVHGPPGTGKTTTIVEIILQAVQQGLKVLCCAPSNVAVDNLVERLAGYKARILRLGHPAR 266
Query: 276 LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEE 335
LL + + +LDA + R D++ + +D+RK++ K K +DK R E++ L KE
Sbjct: 267 LLEPIQQHSLDAVLARSDSAQIVADVRKDIDQAFAKSKKAQDKGERGHFLSEIKALRKEL 326
Query: 336 RKRQQLAVTDVIKNADVVLTTLTGAVS----RKLDNTSFDLVIIDEAAQALEIACWIALL 391
++R++ A+T + +A +VL T TGA S + L FDLV+IDE AQALE +CWI LL
Sbjct: 327 KEREETAMTAALTHASIVLATNTGASSDGPLKLLPENYFDLVVIDECAQALEASCWIPLL 386
Query: 392 KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN 451
K +CILAGDH QLPPT+ S +A KGL +L ER+ + YG++V MLTVQYRMHE IM
Sbjct: 387 KAPKCILAGDHKQLPPTIISHKAAAKGLSLSLMERVIERYGEKVVKMLTVQYRMHEAIMQ 446
Query: 452 WSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCD-MEEKKDEEDSTM 500
W+S ++Y ++ AHPS GV T T LLLID AGC +E + ++E S
Sbjct: 447 WASSEMYGGRLTAHPSVAQHLLKDLPGVTCTEETTIPLLLIDTAGCGLLELEVEDEQSKG 506
Query: 501 NEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQ 560
N GE ++A H + L+ +GV A DI ++ PY QV +L+ + +E+ +VDGFQ
Sbjct: 507 NPGEVQLAGLHIQALVDAGVKARDIAVVAPYNLQVDMLR--EHLCHRYPELEIKSVDGFQ 564
Query: 561 GREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
GREKEA+I+S VRSN K EVGFL++ RR+NVAVTRARR ++CD+ TV S FL RL+E
Sbjct: 565 GREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAIICDSHTVGSQAFLGRLLE 624
Query: 621 YFEEHAEYLSGSEYLNE 637
+F +H + + EYL++
Sbjct: 625 HFRQHGQVRTAFEYLDD 641
>gi|410908195|ref|XP_003967576.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2-like
[Takifugu rubripes]
Length = 998
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 284/616 (46%), Positives = 396/616 (64%), Gaps = 28/616 (4%)
Query: 45 NLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKG---DVLPAHKFGTHDVVVLKPNK 101
+L Q KG +L L TGL G+T+L + K LP++ FG D+V L
Sbjct: 33 SLKDLQSKGVCLLKLHIGSQSTGLYGRTVLILEPRKHLGFSSLPSNSFGPGDIVGLYDTG 92
Query: 102 ADLGSPALGQGVVYRLKDSSITVAFDDIPEEGL----NSPLRLEKLANEVTYRRMKDALI 157
+G G+V R+ +S++VAFDD ++G+ ++ L KLAN+VTY+RMK AL
Sbjct: 93 GCSADSQVGTGIVTRVSQASVSVAFDDT-KDGISFDTDALYNLLKLANDVTYKRMKKALN 151
Query: 158 QLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFML 217
+L+ NGPA LI VLFGE KP+ + + FN NLD SQ++A++ AL+ +++ ++
Sbjct: 152 ELN-SYSNGPAGNLINVLFGETKPSCFSQSNETEFFNKNLDDSQREAVTFALTQRDLAVI 210
Query: 218 HGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLL 277
HGPPGTGKTTTVVEIILQ VK+G K+L CA SN+AVDN+VERL +++++RLGHPARLL
Sbjct: 211 HGPPGTGKTTTVVEIILQAVKQGQKVLCCAPSNVAVDNLVERLAQCKIKVLRLGHPARLL 270
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEM-KALNGKLLKTKDKNTRREIQKELRTLSKEER 336
+ + +LDA + + N+ + SDIRK++ KA G L K +K R ++E+ L KE +
Sbjct: 271 ESIQKHSLDAIIAQSSNADIISDIRKDIDKAFVG-LKKMHNKGERASFKREITELRKELK 329
Query: 337 KRQQLAVTDVIKNADVVLTTLTGAVS----RKLDNTSFDLVIIDEAAQALEIACWIALLK 392
R+ A+T ++K+ADVVL+T TGA + L FD V+IDE AQALE +CWIALL+
Sbjct: 330 SRETTAITQILKSADVVLSTNTGACDDGPLKFLPAEHFDWVVIDECAQALESSCWIALLR 389
Query: 393 GSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNW 452
+C+LAGD+ QLPPT++S +A KGL +L ERL +YGD V MLTVQYRM+ IM W
Sbjct: 390 ARKCVLAGDYKQLPPTIKSQKAAVKGLSVSLMERLIQMYGDTVVRMLTVQYRMNGAIMEW 449
Query: 453 SSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKK-DEEDSTMN 501
+S Q+Y K+ AH S GV T ++LLID AGC + E + +E S N
Sbjct: 450 ASDQMYQGKLTAHSSVESHLLKDLPGVACVEETSTSMLLIDTAGCGLNEMEVADEQSKGN 509
Query: 502 EGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQG 561
EGE ++ H K L ++G+ A DI +I PY QV LL+ S + +E+ +VDGFQG
Sbjct: 510 EGEVDIVALHIKALTEAGLKAKDIAVIAPYNLQVDLLRQRLSV--RHPALEIKSVDGFQG 567
Query: 562 REKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEY 621
REKEA+++S+VRSN K EVGFL++ RR+NVAVTRARR +VCDT TV + FLK LI++
Sbjct: 568 REKEAVVLSLVRSNRKGEVGFLAEDRRINVAVTRARRHIAIVCDTRTVQNHAFLKSLIDH 627
Query: 622 FEEHAEYLSGSEYLNE 637
E + EY+++
Sbjct: 628 VTRRGEVRTAFEYIHD 643
>gi|432861602|ref|XP_004069646.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2-like
[Oryzias latipes]
Length = 987
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 297/647 (45%), Positives = 411/647 (63%), Gaps = 30/647 (4%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
+ ++ FVS L+ E+EAEI + T +R+L Q KG +L L+ TGL G+T
Sbjct: 1 MEVETFVSKTLELLQEEREAEIEETRTWQENRSLKDLQSKGICLLKLQIGSQFTGLYGRT 60
Query: 73 LLEFQSTKG---DVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDI 129
+L + K LP++ FG D+V L + + G+V R+ +S++VA D +
Sbjct: 61 VLVLEPRKHLGFSSLPSNCFGPGDIVGLYDAAGCSATSQICTGIVTRVSQASVSVAIDIL 120
Query: 130 PEEGL---NSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
++ + NS L KLAN+VTY+RMK AL L+ G NGPA +I VLFG +P+ +
Sbjct: 121 KDDAVLDTNSLYNLLKLANDVTYKRMKRALNVLN-GYSNGPAGNIINVLFGNAQPSSHSQ 179
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILAC 246
I F FNSNLD SQ++A+ ALS + + ++HGPPGTGKTTTVVEIILQ VK+G K+L C
Sbjct: 180 PIQF--FNSNLDDSQREAVMFALSQRELAVIHGPPGTGKTTTVVEIILQAVKQGQKVLCC 237
Query: 247 AASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEM- 305
A SN+AVDN+VERL + +++RLGHPARLL + + +LDA + + DN+++ +DIRK++
Sbjct: 238 APSNVAVDNLVERLAQCKAKVLRLGHPARLLESIQKHSLDAILAQSDNANIIADIRKDID 297
Query: 306 KALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS--- 362
K L G K+K R ++E+ L KE + R+ A+T ++K ADVVL+T TGA
Sbjct: 298 KVLMG---MKKEKGERGNYKREIGELKKELKSREATAITQILKGADVVLSTNTGACDDGP 354
Query: 363 -RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGR 421
+ L FD V+IDE AQALE +CWIALLK +CILAGD+ QLPPT++S A KGL
Sbjct: 355 LKLLPAEHFDWVVIDECAQALESSCWIALLKARKCILAGDYKQLPPTIKSQAAASKGLSL 414
Query: 422 TLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKR 471
+L ER+ +YGD V MLTVQYRM+ IM W+SK++Y K+ AH S GV
Sbjct: 415 SLMERVIQIYGDVVVRMLTVQYRMNSAIMEWASKEMYQGKLTAHCSVESHLLKDLTGVAS 474
Query: 472 TSSTEPTLLLIDIAGCDMEEKK-DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITP 530
+ T LLLID AG + E + +E S N+GE ++ H K L ++GV A DI +I P
Sbjct: 475 VAETSTPLLLIDTAGSGLTEMEVTDEQSKGNQGEVDIVELHIKALTEAGVKAKDIAVIAP 534
Query: 531 YAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
Y QV LL+ S + +E+ +VDGFQGREKEA+++S+VRSN K EVGFLS+ RR+N
Sbjct: 535 YNLQVDLLRQRLSA--RHPELEIKSVDGFQGREKEAVVLSLVRSNRKGEVGFLSEDRRIN 592
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
VAVTRARR +VCDT+TV + FLK L+++ E E + EYL +
Sbjct: 593 VAVTRARRHIAVVCDTQTVQNHAFLKSLVDHMTEMGEVRTAFEYLED 639
>gi|149061856|gb|EDM12279.1| immunoglobulin mu binding protein 2, isoform CRA_a [Rattus
norvegicus]
Length = 1003
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 293/654 (44%), Positives = 415/654 (63%), Gaps = 28/654 (4%)
Query: 6 TKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQ 65
T E+ + +++ FV+ L++LE++AE+ + +L Q +G +L L+ +
Sbjct: 12 TTEQMDSSTVESFVAQQLQLLELERDAEVEERRSWQEHSSLKELQSRGVCLLKLQVSGQR 71
Query: 66 TGLMGKTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSI 122
TGL G+ L+ F+ K VLP++ F + D+V L S L GV+ R+ S+
Sbjct: 72 TGLYGQRLVTFEPRKFGPAVVLPSNSFTSGDIVGLYDTNE---SSQLATGVLTRITQKSV 128
Query: 123 TVAFDDIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGE 178
VAFD+ + LN + RL KLAN+VTY+R+K AL+ L K +GPA+ LI VL G
Sbjct: 129 IVAFDESHDFQLNLDRENTYRLLKLANDVTYKRLKKALLTLKK-YHSGPASSLIDVLLGG 187
Query: 179 QKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK 238
P+ + +N+ LD SQK+A+S AL+ K V ++HGPPGTGKTTTVVEIILQ VK
Sbjct: 188 STPSPATEIPPLTFYNTTLDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVK 247
Query: 239 RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLA 298
+G K+L CA SNIAVDN+VERL + +++RLGHPARLL V + +LDA + R DN+ +
Sbjct: 248 QGLKVLCCAPSNIAVDNLVERLALCKKQILRLGHPARLLESVQQHSLDAVLARSDNAQIV 307
Query: 299 SDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLT 358
+DIR+++ + GK KT+DK + + E++ L KE ++R++ A+ + ADVVL T T
Sbjct: 308 ADIRRDIDQVFGKNKKTQDKREKSNFRNEIKLLRKELKEREEAAIVQSLSAADVVLATNT 367
Query: 359 GAVS----RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA 414
GA + + L FD+V++DE AQALE +CWI LLK +CILAGDH QLPPT S +A
Sbjct: 368 GASTDGPLKLLPEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHKQLPPTTVSHKA 427
Query: 415 EKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS------- 467
GL R+L ERLA+ +G V ML VQYRMH+ I W+S+ +Y+ ++ AHPS
Sbjct: 428 ALAGLSRSLMERLAEKHGAAVVRMLAVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLK 487
Query: 468 ---GVKRTSSTEPTLLLIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHAS 523
GV T T LLLID AGC + E ++E+ S N GE + H + L+ +GV A
Sbjct: 488 DLPGVADTEETSVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAG 547
Query: 524 DIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFL 583
DI +I PY QV LL+ +S +K +E+ +VDGFQGREKEA+I++ VRSN K EVGFL
Sbjct: 548 DIAVIAPYNLQVDLLR--QSLSNKHPELEIKSVDGFQGREKEAVILTFVRSNRKGEVGFL 605
Query: 584 SDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
++ RR+NVAVTRARR ++CD+ TV++ FLK L++YF EH E + EYL++
Sbjct: 606 AEDRRINVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEVRTAFEYLDD 659
>gi|73983575|ref|XP_540807.2| PREDICTED: DNA-binding protein SMUBP-2 [Canis lupus familiaris]
Length = 1010
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 290/651 (44%), Positives = 415/651 (63%), Gaps = 32/651 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + + Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKHLDLLELERDAEVEERRSWQENISPKVLQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQ---STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ + T VLP++ F + D+V L D G+ L G++ R+ S+TVAFD
Sbjct: 62 RLLVTLEPRRCTSAAVLPSNSFTSGDIVGLY----DEGN-QLATGILTRITQRSVTVAFD 116
Query: 128 DIPEEGLN------SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKP 181
+ L+ RL KLAN++TY+R+K ALI L K +GPA+ LI VLFG P
Sbjct: 117 ASHDFQLSLDRDRERAYRLLKLANDITYKRLKKALITLKK-YHSGPASSLIEVLFGGSAP 175
Query: 182 TVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS 241
+ N++LD SQK+A+S ALS K + ++HGPPGTGKTTTVVEIILQ V++G
Sbjct: 176 SPASNTEPPLFCNTSLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVRQGL 235
Query: 242 KILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDI 301
K+L CA SNIAVDN+VERL + +++RLGHPARLL + + +LDA + R DN+ + +DI
Sbjct: 236 KVLCCAPSNIAVDNLVERLARCKQKILRLGHPARLLESIQQHSLDAVLARSDNAQIVADI 295
Query: 302 RKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAV 361
RK++ +T+D+ + + E++ L KE ++R++ A+ + + +A VVL T TGA
Sbjct: 296 RKDIDQAFVNNRQTQDRREKSSVWNEVKLLRKELKEREEAAMLESLTSAAVVLATNTGAS 355
Query: 362 S----RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKK 417
S + L +T FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT S +A
Sbjct: 356 SDGPLKLLPDTHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALA 415
Query: 418 GLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS---------- 467
GL +L ERLA+ +G V LTVQYRMH+ IM W+S+ LY+ ++ AHPS
Sbjct: 416 GLSLSLMERLAEEHGARVVRTLTVQYRMHQAIMRWASEALYHGQLTAHPSVAGHLLRDLP 475
Query: 468 GVKRTSSTEPTLLLIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHASDIG 526
GV T T LLL+D AGC + E +D++D S N GE + H + L+ +GV ASDI
Sbjct: 476 GVAATEETGIPLLLVDTAGCGLFELEDDDDQSKGNPGEVRLVSLHIQALVDAGVQASDIA 535
Query: 527 IITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR 586
+ITPY QV LL+ +S + +E+ +VDGFQGREKEA+++S VRSN K EVGFL++
Sbjct: 536 VITPYNLQVDLLR--QSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAED 593
Query: 587 RRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
RR+NVAVTRARR +VCD+ TVS+ FLK L+++F EH E + EYL++
Sbjct: 594 RRINVAVTRARRHVAVVCDSRTVSNHAFLKTLVDHFTEHGEVRTAFEYLDD 644
>gi|449503996|ref|XP_004174557.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2
[Taeniopygia guttata]
Length = 1002
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 284/611 (46%), Positives = 387/611 (63%), Gaps = 29/611 (4%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDV---LPAHKFGTHDVVVLKPNKADLGS 106
Q++G + L+ +TGL G+ L+ FQ K D LP++ FG D+V L A G
Sbjct: 49 QRRGVCLFKLQVSSQRTGLYGRLLVTFQPRKCDSDTELPSNSFGPGDIVGLY-ESAGQGD 107
Query: 107 PALGQGVVYRLKDSSITVAFDDIPEEG-----LNSPLRLEKLANEVTYRRMKDALIQLSK 161
P L GVV R+ ++TVA ++ P +G RL KLAN+VTY R+K AL L K
Sbjct: 108 P-LCTGVVTRVTPKAVTVALEE-PRDGELAVDHEHSFRLLKLANDVTYNRLKRALTAL-K 164
Query: 162 GVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPP 221
+ GPA+ LI VLF P + + FN++LD SQ++A+S +L+ + + ++HGPP
Sbjct: 165 QYRGGPASDLIDVLFFASAPRAFPETKPLEFFNASLDESQREAVSFSLAQRELAIIHGPP 224
Query: 222 GTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVL 281
GTGKTTT+VEIILQ V++G K+L CA SN+AVDN+VERL R RL+RLGHPARLL +
Sbjct: 225 GTGKTTTLVEIILQAVQQGLKVLCCAPSNVAVDNLVERLAGCRARLLRLGHPARLLQPIQ 284
Query: 282 ESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQL 341
+ +LDA + RGD + L +DIR+++ + +DK R E++TL KE ++R++
Sbjct: 285 QHSLDAVLARGDCARLVADIRRDIDQAWVRGPAPQDKGERSHFLGEIKTLRKELKEREEA 344
Query: 342 AVTDVIKNADVVLTTLTGAVS----RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCI 397
A+T + A VVL T TGA S + L T FDLV+IDE AQALE +CWI LLK +CI
Sbjct: 345 AMTAALSQASVVLATNTGASSDGPLKLLPETHFDLVVIDECAQALEASCWIPLLKAPKCI 404
Query: 398 LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQL 457
LAGDH QLPPT+ S A +GL +L ERLA YG+ MLTVQYRMH HIM W+S +L
Sbjct: 405 LAGDHKQLPPTIISHRAAAEGLSLSLMERLAGHYGERAVRMLTVQYRMHRHIMEWASSEL 464
Query: 458 YNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEE-KKDEEDSTMNEGEAE 506
Y ++ AHPS GV T T LLLID AGC + E + ++E S N GE +
Sbjct: 465 YGGRLSAHPSVAQHLLRDLPGVSDTEETSIPLLLIDTAGCGLFELEVEDEQSKGNPGEVQ 524
Query: 507 VAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEA 566
+ H + L+ +GV A DI ++ PY QV +L+ + + +E+ +VDGFQGREKEA
Sbjct: 525 LVGMHIQALVDAGVKAKDIAVVAPYNLQVDMLR--QHLCHRHPELEIRSVDGFQGREKEA 582
Query: 567 IIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHA 626
+I+S VRSN K EVGFL++ RR+NVAVTRARRQ +VCD+ TV S FL+RL+++ +H
Sbjct: 583 VILSFVRSNRKGEVGFLAEERRINVAVTRARRQVAVVCDSHTVGSRPFLRRLLDHLAQHG 642
Query: 627 EYLSGSEYLNE 637
S EYL++
Sbjct: 643 LVRSAFEYLDD 653
>gi|13928794|ref|NP_113774.1| DNA-binding protein SMUBP-2 [Rattus norvegicus]
gi|81917357|sp|Q9EQN5.1|SMBP2_RAT RecName: Full=DNA-binding protein SMUBP-2; AltName:
Full=ATP-dependent helicase IGHMBP2; AltName:
Full=Antifreeze enhancer-binding protein ortholog;
Short=AEP
gi|11066349|gb|AAG28561.1|AF199411_1 antifreeze-enhancer binding protein AEP [Rattus norvegicus]
Length = 988
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 291/649 (44%), Positives = 413/649 (63%), Gaps = 28/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + +L Q +G +L L+ +TGL G
Sbjct: 2 ASYTVESFVAQQLQLLELERDAEVEERRSWQEHSSLKELQSRGVCLLKLQVSGQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ K VLP++ F + D+V L S L GV+ R+ S+ VAFD
Sbjct: 62 QRLVTFEPRKFGPAVVLPSNSFTSGDIVGLYDTNE---SSQLATGVLTRITQKSVIVAFD 118
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + LN + RL KLAN+VTY+R+K AL+ L K +GPA+ LI VL G P+
Sbjct: 119 ESHDFQLNLDRENTYRLLKLANDVTYKRLKKALLTLKK-YHSGPASSLIDVLLGGSTPSP 177
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ +N+ LD SQK+A+S AL+ K V ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 178 ATEIPPLTFYNTTLDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQGLKV 237
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + +++RLGHPARLL V + +LDA + R DN+ + +DIR+
Sbjct: 238 LCCAPSNIAVDNLVERLALCKKQILRLGHPARLLESVQQHSLDAVLARSDNAQIVADIRR 297
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + GK KT+DK + + E++ L KE ++R++ A+ + ADVVL T TGA +
Sbjct: 298 DIDQVFGKNKKTQDKREKSNFRNEIKLLRKELKEREEAAIVQSLSAADVVLATNTGASTD 357
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L FD+V++DE AQALE +CWI LLK +CILAGDH QLPPT S +A GL
Sbjct: 358 GPLKLLPEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHKQLPPTTVSHKAALAGL 417
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
R+L ERLA+ +G V ML VQYRMH+ I W+S+ +Y+ ++ AHPS GV
Sbjct: 418 SRSLMERLAEKHGAAVVRMLAVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGV 477
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLLID AGC + E ++E+ S N GE + H + L+ +GV A DI +I
Sbjct: 478 ADTEETSVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVI 537
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
PY QV LL+ +S +K +E+ +VDGFQGREKEA+I++ VRSN K EVGFL++ RR
Sbjct: 538 APYNLQVDLLR--QSLSNKHPELEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRR 595
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L++YF EH E + EYL++
Sbjct: 596 INVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEVRTAFEYLDD 644
>gi|71122324|gb|AAH99790.1| Ighmbp2 protein [Rattus norvegicus]
Length = 869
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 291/646 (45%), Positives = 411/646 (63%), Gaps = 28/646 (4%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
+++ FV+ L++LE++AE+ + +L Q +G +L L+ +TGL G+ L
Sbjct: 5 TVESFVAQQLQLLELERDAEVEERRSWQEHSSLKELQSRGVCLLKLQVSGQRTGLYGQRL 64
Query: 74 LEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIP 130
+ F+ K VLP++ F + D+V L S L GV+ R+ S+ VAFD+
Sbjct: 65 VTFEPRKFGPAVVLPSNSFTSGDIVGLYDTNE---SSQLATGVLTRITQKSVIVAFDESH 121
Query: 131 EEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
+ LN + RL KLAN+VTY+R+K AL+ L K +GPA+ LI VL G P+ +
Sbjct: 122 DFQLNLDRENTYRLLKLANDVTYKRLKKALLTLKK-YHSGPASSLIDVLLGGSTPSPATE 180
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILAC 246
+N+ LD SQK+A+S AL+ K V ++HGPPGTGKTTTVVEIILQ VK+G K+L C
Sbjct: 181 IPPLTFYNTTLDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCC 240
Query: 247 AASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
A SNIAVDN+VERL + +++RLGHPARLL V + +LDA + R DN+ + +DIR+++
Sbjct: 241 APSNIAVDNLVERLALCKKQILRLGHPARLLESVQQHSLDAVLARSDNAQIVADIRRDID 300
Query: 307 ALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS---- 362
+ GK KT+DK + + E++ L KE ++R++ A+ + ADVVL T TGA +
Sbjct: 301 QVFGKNKKTQDKREKSNFRNEIKLLRKELKEREEAAIVQSLSAADVVLATNTGASTDGPL 360
Query: 363 RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRT 422
+ L FD+V++DE AQALE +CWI LLK +CILAGDH QLPPT S +A GL R+
Sbjct: 361 KLLPEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHKQLPPTTVSHKAALAGLSRS 420
Query: 423 LFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRT 472
L ERLA+ +G V ML VQYRMH+ I W+S+ +Y+ ++ AHPS GV T
Sbjct: 421 LMERLAEKHGAAVVRMLAVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGVADT 480
Query: 473 SSTEPTLLLIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPY 531
T LLLID AGC + E ++E+ S N GE + H + L+ +GV A DI +I PY
Sbjct: 481 EETSVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVIAPY 540
Query: 532 AAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNV 591
QV LL+ +S +K +E+ +VDGFQGREKEA+I++ VRSN K EVGFL++ RR+NV
Sbjct: 541 NLQVDLLR--QSLSNKHPELEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINV 598
Query: 592 AVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
AVTRARR ++CD+ TV++ FLK L++YF EH E + EYL++
Sbjct: 599 AVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEVRTAFEYLDD 644
>gi|417405556|gb|JAA49487.1| Putative dna replication helicase [Desmodus rotundus]
Length = 1000
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 282/615 (45%), Positives = 393/615 (63%), Gaps = 30/615 (4%)
Query: 45 NLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNK 101
+L Q +G +L L+ +TGL G+ L+ + + VLP+ + D+V L
Sbjct: 36 SLKELQSRGVCLLKLQLSSQRTGLYGQLLVTLEPRRCASAGVLPSSSLSSGDIVGLYGEG 95
Query: 102 ADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLN----SPLRLEKLANEVTYRRMKDALI 157
L + GV+ R+ S+TVAFD + L+ + RL KLAN+VTY+R+K ALI
Sbjct: 96 GQLAT-----GVLTRITQKSVTVAFDQSCDFQLSLDHENSYRLLKLANDVTYKRLKTALI 150
Query: 158 QLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFML 217
L K + PA+ LI VLFG+ P+ A +N +LD SQ++A+ ALS + + ++
Sbjct: 151 DLRKH-RASPASSLIEVLFGDAAPSPASDIQAPAFYNPSLDASQQEAVLFALSQRELAII 209
Query: 218 HGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLL 277
HGPPGTGKTTTVVEIILQ V+RG K+L CA SN+AVDN+VE L R++RLGHPARLL
Sbjct: 210 HGPPGTGKTTTVVEIILQAVERGLKVLCCAPSNVAVDNLVEALARCGRRVLRLGHPARLL 269
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERK 337
+ + LDA + RGD++ + +DIR+++ + KL KT+DK + + E++ L KE ++
Sbjct: 270 ESIQQHCLDAALSRGDSTQIVADIRRDIDQVLVKLKKTQDKREKSNFRNEVKLLRKELKE 329
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVS----RKLDNTSFDLVIIDEAAQALEIACWIALLKG 393
R++ A + +++ADV+L T TGA S R L + FD+V++DE AQALE +CW+ LLK
Sbjct: 330 REEAATLESLRSADVILATNTGASSDGPLRLLPDDFFDMVVVDECAQALEASCWVPLLKA 389
Query: 394 SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWS 453
S+CILAGDH QLPPTV S +A ++GL +L ERLA G V LTVQYRMH IM W+
Sbjct: 390 SKCILAGDHKQLPPTVVSPKAAQEGLSLSLMERLAGQCGAGVLRTLTVQYRMHRAIMQWA 449
Query: 454 SKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEED-STMNE 502
S+ LY ++ AHPS GV T T LLL+D AGC + E + E+D S N
Sbjct: 450 SEALYEGQLTAHPSVAERLLRDLPGVAATEETGLPLLLVDTAGCGLSELEQEDDQSRGNP 509
Query: 503 GEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGR 562
GE + H + L+ +GV ASDI +ITPY QV LL+ +S + +E+ +VDGFQGR
Sbjct: 510 GEVRLVSLHVQALVDAGVRASDIAVITPYNLQVDLLR--QSLTHRHPELEIKSVDGFQGR 567
Query: 563 EKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
EKEA+++S VRSN K EVGFL++ RR+NVAVTRARR ++CD+ TVS+ FLK L++YF
Sbjct: 568 EKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVSNHPFLKTLVDYF 627
Query: 623 EEHAEYLSGSEYLNE 637
EH E + EYL++
Sbjct: 628 TEHGEVRTAFEYLDD 642
>gi|194218569|ref|XP_001917022.1| PREDICTED: DNA-binding protein SMUBP-2 [Equus caballus]
Length = 1004
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 284/615 (46%), Positives = 395/615 (64%), Gaps = 27/615 (4%)
Query: 45 NLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNK 101
+L Q +G +L L+ +TGL G+ L+ F+ + VLP++ F + D+V L +
Sbjct: 56 SLKELQSRGVCLLKLQVSSQRTGLYGRLLVTFEPRRCVSSAVLPSNSFTSGDIVGLY-DA 114
Query: 102 ADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLN----SPLRLEKLANEVTYRRMKDALI 157
A+ GS L G++ R+ S++VAFD+ + L+ S RL KLAN+VTY+R K ALI
Sbjct: 115 ANEGS-QLATGILTRITQKSVSVAFDESHDCQLSLDRESSYRLLKLANDVTYKRQKKALI 173
Query: 158 QLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFML 217
L K +GPA+ LI VLFG P+ + N++LD SQK+A+ ALS K + ++
Sbjct: 174 TLRK-YHSGPASSLIEVLFGASAPSPASEIGPLTFCNASLDASQKEAVKFALSQKELAVI 232
Query: 218 HGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLL 277
HGPPGTGKTTTVVE+ILQ VK+G K+L CA SNIAVDN+VERL + R++RLGHPARLL
Sbjct: 233 HGPPGTGKTTTVVEVILQVVKQGLKVLCCAPSNIAVDNLVERLAQCKQRILRLGHPARLL 292
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERK 337
+ + +LDA + R DN+ + +DIRK++ + K K ++K + + E++ L KE ++
Sbjct: 293 ESIQQHSLDAVLARSDNAQIVADIRKDIDQVFVKNKKIQEKQEKSNFRSEIKLLRKELKE 352
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVS----RKLDNTSFDLVIIDEAAQALEIACWIALLKG 393
R++ A+ + + +ADVVL T TGA + L + FD+V+IDE AQALE +CWI LLK
Sbjct: 353 REEAAMLESLTSADVVLATNTGASPDGPLKLLPDGYFDVVVIDECAQALEASCWIPLLKA 412
Query: 394 SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWS 453
+C+LAGDH QLPPT+ S +A GL +L ERL YG V LTVQYRMH+ IM W+
Sbjct: 413 RKCVLAGDHKQLPPTIVSHKAALAGLSLSLMERLDQEYGARVVRTLTVQYRMHQAIMQWA 472
Query: 454 SKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNE 502
S+ LY ++ AHPS GV T T LLL+D AGC + E ++E E S N
Sbjct: 473 SEALYAGQLTAHPSVAGHLLRDLPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNP 532
Query: 503 GEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGR 562
GE + H + L+ +GV ASDI +ITPY QV LL+ +S + +E+ +VDGFQGR
Sbjct: 533 GEVRLVALHVQALVDAGVCASDIAVITPYNLQVDLLR--QSLAHRHPELEIKSVDGFQGR 590
Query: 563 EKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
EKEA+I+S VRSN K EVGFL++ RR+NVAVTRARR +VCD+ TV++ FLK L++Y
Sbjct: 591 EKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRTVNNHAFLKTLLDYC 650
Query: 623 EEHAEYLSGSEYLNE 637
H E + EYL++
Sbjct: 651 TVHGEVRTAFEYLDD 665
>gi|426252598|ref|XP_004019993.1| PREDICTED: DNA-binding protein SMUBP-2 [Ovis aries]
Length = 874
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 278/615 (45%), Positives = 390/615 (63%), Gaps = 30/615 (4%)
Query: 45 NLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNK 101
+L Q +G +L L+ +TGL G+ L+ + + VLP++ F + D+V L
Sbjct: 25 SLKELQNRGVCLLKLQVSSQRTGLYGRLLITLEPRRCVSAAVLPSNSFTSGDIVGLYDES 84
Query: 102 ADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLN----SPLRLEKLANEVTYRRMKDALI 157
L + G++ R+ ++TVAFD+ + L+ RL KLAN+VTY+R+K ALI
Sbjct: 85 GQLAT-----GILTRITQKAVTVAFDESHDSQLSLDQEHSYRLLKLANDVTYKRLKKALI 139
Query: 158 QLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFML 217
L K +GPA+ LI VLFG P+ + N LD SQ++A+ ALS K + ++
Sbjct: 140 SLKK-YHSGPASSLIEVLFGTADPSPPSEMPPLTFCNPALDASQQEAVLFALSQKELAII 198
Query: 218 HGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLL 277
HGPPGTGKTTTVVEIILQ VKRGSK+L CA SN+AVDN+VERL + R++RLGHPARLL
Sbjct: 199 HGPPGTGKTTTVVEIILQAVKRGSKVLCCAPSNVAVDNLVERLAQWKQRILRLGHPARLL 258
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERK 337
+ + +LDA + R D + + +DIR+++ K KT+DK + + E++ L KE +
Sbjct: 259 DSIQQHSLDAVLARSDGARIVADIRRDIDQAWAKNRKTQDKREKSNFRDEIKLLRKELKD 318
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVS----RKLDNTSFDLVIIDEAAQALEIACWIALLKG 393
R++ A+ + + A V+L T TGA + + L + FD+V+IDE AQALE +CWI LLK
Sbjct: 319 REEAAMLESLAAASVILATNTGASADGPLKLLPDGHFDVVVIDECAQALEASCWIPLLKA 378
Query: 394 SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWS 453
+CILAGDH QLPPT+ S +A GL +L ERLA+ +G MLTVQYRMH+ I W+
Sbjct: 379 RKCILAGDHKQLPPTIVSHKAALAGLSLSLMERLAERHGAGAVRMLTVQYRMHQAIARWA 438
Query: 454 SKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCD-MEEKKDEEDSTMNE 502
S+ LY+ ++ AHPS GV T T LLL+D AGC +E ++D+E S N
Sbjct: 439 SEALYHGQLTAHPSVAGHLLRDLPGVAATEETGVPLLLVDTAGCGLLELEEDDEQSKGNP 498
Query: 503 GEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGR 562
GE + H + L+ +GV A+DI +ITPY QV LL+ ++ + +E+ +VDGFQGR
Sbjct: 499 GEVRLVGLHVQALVDAGVRAADIAVITPYNLQVDLLR--QNLAHRHPELEIRSVDGFQGR 556
Query: 563 EKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
EKEA+I+S VRSN K EVGFL++ RR+NVAVTRARR +VCD+ TVS+ FLK L++Y
Sbjct: 557 EKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRTVSNHAFLKTLVDYL 616
Query: 623 EEHAEYLSGSEYLNE 637
EH E + EYL++
Sbjct: 617 TEHGEVRTAFEYLDD 631
>gi|320164041|gb|EFW40940.1| immunoglobulin mu binding protein 2 [Capsaspora owczarzaki ATCC
30864]
Length = 679
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 289/679 (42%), Positives = 418/679 (61%), Gaps = 60/679 (8%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQ--KKGSTILNLKCVDAQTGL 68
++ S+ +FV+ LIDLE++AE+ T + L TA+ ++G ++ L + TG
Sbjct: 4 TSASVAKFVATQQLLIDLERKAEVER--TDNLRQTLTTAELVQRGLCLVKLTVASSYTGF 61
Query: 69 MGKTLLEFQSTKG------DVLPAHKFGTHDVVVLKPN-KADLG-------------SPA 108
GK ++ + G ++LPA+KF D+V ++ N K G +PA
Sbjct: 62 GGKCHVDLELVGGGKNAADNLLPANKFRPGDIVTIEQNIKGSSGVNMSATSSMKQASAPA 121
Query: 109 LG-----------QGVVYRLKDSSITVAFDD-IPEEGLNSPLRLEKLANEVTYRRMKDAL 156
GVVY+ D+ +TV+ + +P+ L+ LRL+ AN+ TY+R + +
Sbjct: 122 GSSDDGQQQQQRVSGVVYKTSDARVTVSLSEPLPDYLLDCVLRLDMGANDTTYKRCCNVI 181
Query: 157 IQLSKGVQNG-PAAGLIPVLFGEQKP--TVLKKDIAFKPFNSNLDHSQKDAISKALSSKN 213
+L G + P + L+ VLFG+ KP T A N L+ Q+ A+S L++ +
Sbjct: 182 SKLGLGAYSSLPCSHLVDVLFGQSKPLFTTEIAPSAISWLNPGLNDVQRSAVSFCLAASD 241
Query: 214 VFMLHGPPGTGKTTTVVEIILQEVKRGS---KILACAASNIAVDNIVERLVP-HRVRLVR 269
V ++HGPPGTGKTTT+VE+I Q V R KILAC SN++VDNIVERLV ++ +VR
Sbjct: 242 VALIHGPPGTGKTTTIVELINQIVMRHGPEVKILACGPSNVSVDNIVERLVASNKTSVVR 301
Query: 270 LGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELR 329
LGHPAR+LP VL +L++ + D L +DI++EM A KL + + R+E+ EL+
Sbjct: 302 LGHPARMLPSVLAHSLESVMAASDAGKLVADIKREMDAATKKLARPIPRQERKELYNELK 361
Query: 330 TLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNT--SFDLVIIDEAAQALEIACW 387
L KE +KR++ +V V+++ V TLTGA+S+ + ++ ++D VIIDEA Q++E+ CW
Sbjct: 362 NLRKELKKRERDSVQQVLQSTQVTCCTLTGAMSKMIASSPINYDWVIIDEAPQSMEVHCW 421
Query: 388 IALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHE 447
+A+LKG R +LAGDH QLPPT+ S AEKKGL TLF+RL YGD+VT MLTVQYRM+
Sbjct: 422 MAILKGKRLVLAGDHKQLPPTILSDAAEKKGLSLTLFDRLIKAYGDQVTRMLTVQYRMNA 481
Query: 448 HIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEED 497
IM WSS ++Y K+ + PS VK+T TE L ID GC + E + +D
Sbjct: 482 KIMQWSSNEMYGGKLTSAPSVQAHLLCELPRVKKTEETESALFFIDTTGCSLYETEAADD 541
Query: 498 -STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSK-DDKLKNMEVST 555
S NEGEA+V + H KRL+ +GV D+ +ITPY AQV LRSK + +E+ +
Sbjct: 542 ESKSNEGEADVVVQHVKRLLDAGVTERDMAVITPYNAQV---GRLRSKLSVQYPQLEIGS 598
Query: 556 VDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFL 615
VDGFQGREKEA++IS+VRSN K+EVGFL++ RR+NVA+TRARR C++ D++TVS+D FL
Sbjct: 599 VDGFQGREKEAVVISLVRSNDKREVGFLAEHRRLNVAITRARRHVCVIGDSDTVSNDKFL 658
Query: 616 KRLIEYFEEHAEYLSGSEY 634
RL+++ EH E S EY
Sbjct: 659 GRLVDWLCEHGELRSAEEY 677
>gi|335281378|ref|XP_003122472.2| PREDICTED: DNA-binding protein SMUBP-2 [Sus scrofa]
Length = 987
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 287/649 (44%), Positives = 405/649 (62%), Gaps = 30/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV L++LE+ AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVIKQLDLLELERSAEVEERRSWQENVSLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + VLP++ F + D+V L + L + GV+ R+ +TVA D
Sbjct: 62 RLLVTFEPRRCASAAVLPSNSFTSGDIVGLYDEDSQLAT-----GVLTRITQKLVTVALD 116
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ L+ RL KLAN+VTY+R+K AL L K +GPA+ LI VLFG P+
Sbjct: 117 ASHDFQLSLDRERSYRLLKLANDVTYKRLKKALTTLQK-YHSGPASALIEVLFGASAPSP 175
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+N+ LD SQK+A+ ALS K + ++HGPPGTGKTTTVVEIILQ VK+GSK+
Sbjct: 176 ASDIPPLTFYNTALDASQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGSKV 235
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SN+AVDN+VERL + R+VRLGHPARLL + + +LDA + R D + + +DIR+
Sbjct: 236 LCCAPSNVAVDNLVERLARWKQRIVRLGHPARLLESIQQHSLDAVLARSDGARVVADIRR 295
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + GK KT+DK + + E++ L KE ++R++ A+ + + A VVL T GA S
Sbjct: 296 DIDQVLGKTKKTQDKREKSHFRDEIKLLRKELKEREEAAMLESLTAARVVLATNAGASSD 355
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L + FD+V+IDE AQALE +CW+ LLK +CILAGDH QLPPT+ S +A GL
Sbjct: 356 GPLKLLPDGHFDVVVIDECAQALEASCWVPLLKARKCILAGDHKQLPPTIISHKAALAGL 415
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERL + G V MLTVQYRMH+ I W+S+ LY+ ++ AH S GV
Sbjct: 416 ALSLMERLVEERGAGVLRMLTVQYRMHQAIAQWASEALYHGRLTAHASVAGHLLRDLPGV 475
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A D+ +I
Sbjct: 476 AATEETGIPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVRLHVQALVDAGVPAGDVAVI 535
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
TPY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 536 TPYNLQVDLLR--QSLAQRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 593
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR +VCD+ TVS+ FLK L+ YF EH E + EYL++
Sbjct: 594 INVAVTRARRHVAVVCDSRTVSNHAFLKTLVAYFAEHGEVRTAFEYLDD 642
>gi|332249730|ref|XP_003274011.1| PREDICTED: DNA-binding protein SMUBP-2 [Nomascus leucogenys]
Length = 1002
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 281/649 (43%), Positives = 407/649 (62%), Gaps = 27/649 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKQLDLLELERDAEVEERRSWQENICLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + LP++ F + D+V L ++ S L G++ R+ S+TVAFD
Sbjct: 62 RLLVTFEPRRCGSAAALPSNSFTSGDIVGLYDAASE--SSQLATGILTRVTQKSVTVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ + RL KLAN+VTYRR+K ALI L K +GPA+ LI VLFG P+
Sbjct: 120 ESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKK-YHSGPASSLIEVLFGRSAPSP 178
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ FN+ LD SQK+A+S ALS K + ++HGPPGTGK E+ Q + GS++
Sbjct: 179 ASEIHPLTFFNTCLDTSQKEAVSFALSQKELAIIHGPPGTGKPWFDYEVNDQILTCGSQV 238
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL + + +LDA + R D++ + +DIRK
Sbjct: 239 LCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRK 298
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + K KT+DK + + E++ L KE ++R++ A+ + + +A+VVL T TGA
Sbjct: 299 DIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASDD 358
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT S +A GL
Sbjct: 359 GPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGL 418
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ YG V LTVQYRMH+ IM W+S +Y ++ AHPS GV
Sbjct: 419 SLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHPSVAGHLLRDLPGV 478
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A DI ++
Sbjct: 479 AATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVV 538
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
+PY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 539 SPYNLQVDLLR--QSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 596
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 597 INVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 645
>gi|410974756|ref|XP_003993808.1| PREDICTED: DNA-binding protein SMUBP-2 [Felis catus]
Length = 957
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 279/616 (45%), Positives = 394/616 (63%), Gaps = 32/616 (5%)
Query: 45 NLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNK 101
+L Q +G +L L+ +TGL G+ L+ F+ + LP++ F + D+V L
Sbjct: 27 SLKELQSQGVCLLKLQVSSQRTGLYGRLLVTFEPRRCASATALPSNSFTSGDIVGLYDEG 86
Query: 102 ADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLN----SPLRLEKLANEVTYRRMKDALI 157
L + G++ R+ S+TVAFD+ + L+ RL KLAN+VTY+R+K ALI
Sbjct: 87 GQLAT-----GILTRIMQRSVTVAFDESHDFQLSLDRERAYRLLKLANDVTYKRLKKALI 141
Query: 158 QLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPF-NSNLDHSQKDAISKALSSKNVFM 216
L K +GPA+ LI V+FG P+ + PF N++LD SQK+A+S ALS K + +
Sbjct: 142 TLKK-YHSGPASSLIEVVFGGSPPSP-ASETQPPPFCNTSLDASQKEAVSFALSQKELAI 199
Query: 217 LHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARL 276
+HGPPGTGKTTTVVEIILQ V+RG K+L CA SN+AVDN+ ERL + +++RLGHPARL
Sbjct: 200 IHGPPGTGKTTTVVEIILQAVRRGLKVLCCAPSNVAVDNLAERLARCQQKVLRLGHPARL 259
Query: 277 LPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEER 336
L + + +LDA + R D++ + +DIRK++ K +T+DK + E++ L KE +
Sbjct: 260 LECIQQHSLDAVLARSDSAQIVADIRKDIDQAFLKNRQTQDKREKSSFWNEIKLLRKELK 319
Query: 337 KRQQLAVTDVIKNADVVLTTLTGAVS----RKLDNTSFDLVIIDEAAQALEIACWIALLK 392
+R++ A+ + +++A VVL T TGA + L + FD+V+IDE AQALE +CWI LLK
Sbjct: 320 EREEAAMLESLRSAAVVLATNTGASPDGPLKLLPDGHFDVVVIDECAQALEASCWIPLLK 379
Query: 393 GSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNW 452
+CILAGDH QLPPT+ S +A GL +L ERL G V LTVQYRMH IM W
Sbjct: 380 AGKCILAGDHKQLPPTIVSPKAAAAGLALSLMERLVAEQGASVVRTLTVQYRMHRAIMQW 439
Query: 453 SSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEED-STMN 501
+S+ LY+ ++ AHPS GV T T LLL+D AGC + E ++E+D S N
Sbjct: 440 ASEALYHGRLTAHPSVAGHLLRDLPGVAATEETGIPLLLVDTAGCGLFELEEEDDQSKGN 499
Query: 502 EGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQG 561
GE + H + L+++GV ASDI +ITPY QV LL+ +S + +E+ +VDGFQG
Sbjct: 500 PGEVRLVSLHVQALVEAGVRASDIAVITPYNLQVDLLR--QSLAHRHPELEIKSVDGFQG 557
Query: 562 REKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEY 621
REKEA+++S VRSN K EVGFL++ RR+NVAVTRARR +VCD+ TV++ FLK L+++
Sbjct: 558 REKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRTVNNHAFLKTLVDH 617
Query: 622 FEEHAEYLSGSEYLNE 637
F EH E + EYL++
Sbjct: 618 FTEHGEVRTAFEYLDD 633
>gi|114145750|ref|NP_001041463.1| zinc finger protein 2 [Ciona intestinalis]
gi|93003124|tpd|FAA00145.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 1048
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 289/657 (43%), Positives = 408/657 (62%), Gaps = 44/657 (6%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
++EFVS L+ E AE+ + A+ + ++KG I L+ +TGL G+T+
Sbjct: 3 IEEFVSKHLDLLAEEHAAEVEENRAGNATLSQSVLKRKGLCIPKLEVTGVKTGLYGRTVA 62
Query: 75 EFQSTKGD-VLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD------ 127
+F D LP + F T D+V + + S G G+V D I+VAF+
Sbjct: 63 KFGLKSADKSLPFNVFKTGDIVGID----QVQSETSGSGIVSHTSDKHISVAFEGSEMRD 118
Query: 128 --DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK 185
D NS + L KLANEVTY+R+K AL L K +GP+ LI VLFG+ KP
Sbjct: 119 TLDSLAHNRNS-VALIKLANEVTYKRLKRALEDLKK-YSDGPSQHLIEVLFGDTKPQQFN 176
Query: 186 -KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKIL 244
+++ F N NL+ Q +A+ ALS + ++HGPPGTGKTTTVVE+I Q VK G K+L
Sbjct: 177 LQELTF--VNQNLNECQHNAVKFALSQSELAIIHGPPGTGKTTTVVEVIAQLVKAGRKVL 234
Query: 245 ACAASNIAVDNIVERLVP--------HRVRLVRLGHPARLL-PQVLESALDAQVLRGDNS 295
ACA SN+AVDN+VE+L ++ +VRLGHPAR+L +V + +LDA V D +
Sbjct: 235 ACAPSNVAVDNLVEKLSSISVDKVSGGKMSIVRLGHPARMLEKEVKQLSLDALVSSSDAA 294
Query: 296 SLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLT 355
++ D+R +++A+ L + DK R +++E + L E ++R+ A+ +++ +ADV+L
Sbjct: 295 AIVRDVRSDIEAVQKSLSRCPDKGKRFSLRQERKLLFSELKQRENKALNEILSSADVILA 354
Query: 356 TLTGAVSR----KLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
T GA ++ L + FD VIIDE Q+LE ACWI+LL+ RCILAGDHLQLPPT+ S
Sbjct: 355 TNVGAHAKGPLQHLPHDYFDDVIIDECGQSLEAACWISLLRARRCILAGDHLQLPPTIIS 414
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLY------NSKIKAH 465
+A GL TL ER+ +L GD V SMLT QYRMH IM+W+SK++Y N K++ H
Sbjct: 415 HKAAANGLATTLLERMINLQGDSVVSMLTEQYRMHRDIMHWASKKMYDGKLTANCKVQCH 474
Query: 466 ----PSGVKRTSSTEPTLLLIDIAGCDM-EEKKDEEDSTMNEGEAEVAMAHAKRLIQSGV 520
GV T T LLL+D AGC+M E + +E S N GEA + +H + L+++GV
Sbjct: 475 LLSDMPGVDNTEDTRLPLLLVDTAGCEMYESESEESISKANTGEAMIVCSHVQTLVKAGV 534
Query: 521 HASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEV 580
SDI II+PY QV LL+ +S +K N+E+ +VDGFQGREKEA+I+++VRSN +E+
Sbjct: 535 KESDIAIISPYNLQVDLLR--QSLKEKHPNIEIKSVDGFQGREKEAVILTLVRSNLDREI 592
Query: 581 GFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
GFLSD+RR+NVAVTRARR +VCD+ TV SD F+K LI++ EH + +G EYLN+
Sbjct: 593 GFLSDKRRLNVAVTRARRHLAVVCDSTTVCSDNFIKSLIDHITEHGDIRTGFEYLND 649
>gi|66824331|ref|XP_645520.1| AN1-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
gi|60473615|gb|EAL71556.1| AN1-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
Length = 1024
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 274/700 (39%), Positives = 414/700 (59%), Gaps = 79/700 (11%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
++ ++ L+D+EKE+E++ +I + A+ + + KG TI +K ++ TGL G+ L+
Sbjct: 1 MENYIKKTLELLDIEKESEVNEAIENFATLSNKELELKGVTINKVKILNFSTGLSGRILI 60
Query: 75 EF-----------------------------QSTKGDVLPAHKFGTHDVVVLKPNKADLG 105
+ LP HK D+V ++P+K+ G
Sbjct: 61 KLARASFVDNGGSNNNNNNKKQNNDKDSDGDDEDDNFDLPPHKISNGDIVGIRPSKSKPG 120
Query: 106 SPALGQGVVYRLKDSSITVAFDDIPEEG--LNSPL---------RLEKLANEVTYRRMKD 154
+ +GVVY++ I +AFDD E+ N P+ ++KLAN+VTY+++++
Sbjct: 121 TNHYFKGVVYKVDSRKIVIAFDDNYEDSDPNNRPMLDEYFQTLYSIDKLANDVTYKKIRE 180
Query: 155 ALIQLSKGVQ---NGPAAGLIPVLFGE-QKPT--------VLKKDIAFKPFNSNLDHSQK 202
+L +L V LI +L + +P+ + K+ + N L+ SQK
Sbjct: 181 SLDKLKLNVNKRTGNSENSLINLLLNDGYQPSNNNSYFQQINKEKFEQQLINKGLNQSQK 240
Query: 203 DAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVP 262
+AI +LSS +V +HGPPGTGKTTTVVE I+Q +K G K+LAC SN++VDN++E+L+
Sbjct: 241 EAILFSLSSNDVACIHGPPGTGKTTTVVEFIVQLIKSGKKVLACGPSNLSVDNMLEKLLE 300
Query: 263 HR---------VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
+ + R+GHP R+LPQ+L+ LD + + + I+ E+K+L+ +LL
Sbjct: 301 YSNSSSCNGFLINATRIGHPTRILPQLLKHTLDHKTKNSEGGQIIKGIKDEIKSLSKQLL 360
Query: 314 KTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNT-SFDL 372
K K + RR IQ ++ L + + R++ + VI +++V+L+T TGA L +FD
Sbjct: 361 KVKQHSERRVIQSSIKELRIDLKNREKSLIQQVINDSNVILSTNTGASDSSLKGIDNFDW 420
Query: 373 VIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG 432
V+IDE AQALE +CWI + KG++ +LAGDH QLPPT+ S+EA K GL TLFER+ YG
Sbjct: 421 VVIDECAQALEASCWIPIQKGNKLLLAGDHQQLPPTIHSMEAAKMGLSITLFERIIKQYG 480
Query: 433 DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS------------GVKRTSSTEPTLL 480
D+V+ +L VQYRM+ IM+WSS + YNSK+ A S ++ T +T LL
Sbjct: 481 DQVSRLLNVQYRMNHKIMDWSSMEFYNSKMIADKSVSNHLLVTGDSPKIRNTLTTTCPLL 540
Query: 481 LIDIAGCDMEEKKDEE-DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK 539
+ID +GCDMEE +D+E +S N GE V H ++LI+ GV +DIG+ITPY QV LLK
Sbjct: 541 MIDTSGCDMEESQDDEGESKFNNGEVIVVKRHIEKLIECGVKPNDIGVITPYNGQVKLLK 600
Query: 540 ILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSK--KEVGFLSDRRRMNVAVTRAR 597
SK K +ME+ TVDGFQGREK+ IIISMVRSN+ +VGFL++ RR NVA+TRAR
Sbjct: 601 SYLSK--KYSSMEIGTVDGFQGREKDVIIISMVRSNTDAPHKVGFLTEDRRTNVAITRAR 658
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+ +VCDT+T+SS LKR+++YF+ + + S EY+ +
Sbjct: 659 KHVVVVCDTDTISSHEPLKRMVDYFKLNGLFRSALEYIED 698
>gi|395851782|ref|XP_003798431.1| PREDICTED: DNA-binding protein SMUBP-2 [Otolemur garnettii]
Length = 991
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 276/646 (42%), Positives = 395/646 (61%), Gaps = 59/646 (9%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ TGL G
Sbjct: 34 ASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQCTGLYG 93
Query: 71 KTLLEFQSTKGD---VLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + VLP++ F + D+V L + A GS L G++ R+ S TVAFD
Sbjct: 94 RLLVTFEPRRCGSEAVLPSNSFTSGDIVGLY-DTASEGS-QLATGILTRITQKSATVAFD 151
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ + RL KLAN+VTY+R+K ALI L K +GPA+ LI VLF P+
Sbjct: 152 ESQDFQLSLDRENSYRLLKLANDVTYKRLKKALIALKK-YHSGPASLLIEVLFSASAPSP 210
Query: 184 LKKDIAFKPF-NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSK 242
+I F N++LD SQK+A+S ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K
Sbjct: 211 -ASEIGLVTFCNASLDSSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLK 269
Query: 243 ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR 302
+L CA SNIAVDN+VERL + R++RLGHP+R+L + + +LDA + R D + + ++IR
Sbjct: 270 VLCCAPSNIAVDNLVERLAQCKQRILRLGHPSRILEPIQQYSLDAVLARSDGAQIVAEIR 329
Query: 303 KEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS 362
K++ Q+ V ++ + G +
Sbjct: 330 KDID---------------------------------QVFVCVLVTGPLACGASSDGPL- 355
Query: 363 RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRT 422
+ L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT+ S +A GL R+
Sbjct: 356 KLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHQQLPPTIISHKAALAGLSRS 415
Query: 423 LFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRT 472
L ERLA+ +G LTVQYRMH+ IM W+S+ +Y+ ++ AHPS GV T
Sbjct: 416 LMERLAEEHGASAVRTLTVQYRMHQAIMRWASEAMYHGQLTAHPSVAGHLLRDLPGVAAT 475
Query: 473 SSTEPTLLLIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPY 531
T LLL+D AGC + E ++E+D S N GE + H + L+ +GV ASDI +ITPY
Sbjct: 476 EETSIPLLLVDTAGCGLFELEEEDDQSRGNPGEVRLVTLHVQALVDAGVQASDIAVITPY 535
Query: 532 AAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNV 591
QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR+NV
Sbjct: 536 NLQVDLLR--QSLVRRHPQLEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINV 593
Query: 592 AVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
AVTRARR ++CD+ T+S+ FLK L+EYF +H E + EYL++
Sbjct: 594 AVTRARRHVAVICDSHTISNHTFLKTLVEYFSQHGEVRTAFEYLDD 639
>gi|402892584|ref|XP_003909490.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2 [Papio
anubis]
Length = 1010
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 281/669 (42%), Positives = 409/669 (61%), Gaps = 48/669 (7%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVTKQLDLLELERDAEVEERRSWQENVSLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK-GDV--LPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ F+ + G V LP++ F + D+V L + A+ GS L G++ R+ S+TVAFD
Sbjct: 62 RLLVTFEPRRCGSVAALPSNSFTSGDIVGLY-DAANEGS-QLATGILTRVTQKSVTVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ + RL KLAN+VTYRR+K ALI L K +GPA+ LI VLFG P+
Sbjct: 120 ESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKK-YHSGPASSLIEVLFGRSAPSP 178
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ FN++LD SQK+A+S ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 179 ASEIHPLTFFNTSLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 238
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SNIAVDN+VERL + R++RLGHPARLL + + +LDA V R D++ + +DIRK
Sbjct: 239 LCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVVARSDSAQIVADIRK 298
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS- 362
++ + K KT+DK + + E++ L KE + R++ A+ + + +A+VVL T TGA +
Sbjct: 299 DIDQVFVKNKKTQDKREKSNFRNEVKLLRKELKGREEAAILESLTSANVVLATNTGASAD 358
Query: 363 ---RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPTV S +A GL
Sbjct: 359 GPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTVVSHKAALAGL 418
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERLA+ YG LTVQYRMH+ IM W+S +Y+ ++ AHPS GV
Sbjct: 419 SLSLMERLAEEYGARAVRTLTVQYRMHQTIMRWASDTMYHGQLTAHPSVAGHLLRDLPGV 478
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A D+ ++
Sbjct: 479 AATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDVAVV 538
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVST--------------------VDGFQGREKEAII 568
+PY QV LL+ +S + +E+ + V GF + ++
Sbjct: 539 SPYNLQVDLLR--QSLAHRHPELEIKSPLCTAPRGVVAVAVGSVPLWVVGFPLGTR-VVV 595
Query: 569 ISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEY 628
N EVGFL++ RR+NVAVTRARR ++CD+ TV++ FLK L+EYF +H E
Sbjct: 596 PEAGLVNGLCEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEV 655
Query: 629 LSGSEYLNE 637
+ EYL++
Sbjct: 656 RTAFEYLDD 664
>gi|403301188|ref|XP_003941279.1| PREDICTED: DNA-binding protein SMUBP-2 [Saimiri boliviensis
boliviensis]
Length = 969
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 272/645 (42%), Positives = 390/645 (60%), Gaps = 58/645 (8%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASAAVESFVAKQLELLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ + + LP++ F + D+V L + A+ GS L G++ R+ S+TVAFD
Sbjct: 62 RLLVTLEPRRCGSAAALPSNSFTSGDIVGLY-DAANEGS-QLATGILTRVTQKSVTVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ + RL KLAN+VTY+R++ AL L K +GPA+ LI VLFG P+
Sbjct: 120 ESHDFQLSLDRENSYRLLKLANDVTYKRLRKALTALKK-YHSGPASSLIEVLFGRSAPSP 178
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ FN+ LD SQK+A+S ALS K + ++HGPPGTGKTTTVVEIILQ VK+G K+
Sbjct: 179 ASEIHPLTFFNTCLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV 238
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SN+AVDN+VERL + R++RLGHPARLL + + +LDA + R D++ + +DIRK
Sbjct: 239 LCCAPSNVAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRK 298
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSR 363
++ + V+ + V + G + +
Sbjct: 299 DIDQV----------------------------------FVGVVASVHVGCASGDGPL-K 323
Query: 364 KLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTL 423
L F +V+IDE AQALE +CWI LL+ +CILAGDH QLPPTV S A GL +L
Sbjct: 324 LLPEGHFGMVVIDECAQALEASCWIPLLQAGKCILAGDHKQLPPTVISHRAALAGLSLSL 383
Query: 424 FERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTS 473
ERLAD YG+ V LTVQYRMH+ IM W+S+ +Y ++ AHPS GV T
Sbjct: 384 MERLADEYGERVVRTLTVQYRMHQAIMRWASEAMYLRQLTAHPSVAGHLLRDLPGVAATE 443
Query: 474 STEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYA 532
T LLL+D AGC + E ++E E S N GE + H + L+ +GV A DI +++PY
Sbjct: 444 ETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVVSPYN 503
Query: 533 AQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVA 592
QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR+NVA
Sbjct: 504 LQVDLLR--QSLAHRYPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVA 561
Query: 593 VTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
VTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 562 VTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 606
>gi|427781487|gb|JAA56195.1| Putative dna replication helicase [Rhipicephalus pulchellus]
Length = 773
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 282/646 (43%), Positives = 393/646 (60%), Gaps = 26/646 (4%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
SL FV L++LE++ E+ + ++ Q KG I L A TGL G+T+
Sbjct: 24 SLDGFVEKHLSLLELERQEEVEQNAKLQEKYSVKELQSKGLCITKLVLDCAHTGLYGRTV 83
Query: 74 LEFQSTK-GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD---DI 129
+F+S G LP+H F D+V + +D + GVV + ++IT+AFD D
Sbjct: 84 CKFRSCHHGAPLPSHGFSNGDIVGVVV-ASDAAREVICSGVVSSVAPANITLAFDEGRDT 142
Query: 130 PEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIA 189
+ L KLAN+VTYRR+K L +L K + + LI +LFG PT +
Sbjct: 143 LDADDGRVFNLLKLANDVTYRRLKRTLEKLRK-TREIRYSNLIEILFGTVSPTEAPISAS 201
Query: 190 FKPF---NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILAC 246
KP N LD SQ++A++ +L K + ++HGPPGTGKTTT+VE+ILQ K+GSK+L C
Sbjct: 202 QKPIEFSNKALDESQQEAVAFSLRQKELAIIHGPPGTGKTTTLVEVILQCSKQGSKVLVC 261
Query: 247 AASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
A SN+AVDN+VERL+ +++VRLGHPARLLP + +LDA + R D+ ++ DIRKE+
Sbjct: 262 APSNVAVDNLVERLLCTSLKVVRLGHPARLLPAIARHSLDAILARSDDFAIIGDIRKEID 321
Query: 307 ALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS---- 362
L K+K K+ +++ +L L KE + R++ A+ ++ +ADVVL+TLT A
Sbjct: 322 ELMSSSSKSKAKDKGYQMRGKLSELRKELKDRERRAIGRILASADVVLSTLTTASDDGPL 381
Query: 363 RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRT 422
+ L F + +IDE +QALE+ACW+ALL+ +CILAGDHLQLPPT+ S A K GL T
Sbjct: 382 KNLPEGHFQVAVIDECSQALEVACWMALLRAPKCILAGDHLQLPPTIVSEAAAKGGLEVT 441
Query: 423 LFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRT 472
L ER L+G+ V ML QYRMHE IM WSS +LY ++ AH S GV+
Sbjct: 442 LMERALRLHGEAVVRMLVTQYRMHELIMRWSSDRLYGGRLLAHASVAAHLLRDLPGVEDN 501
Query: 473 SSTEPTLLLIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPY 531
T LLLID AGC M E +D S NEGEA++ H +RL+ SGV AS+I +I+PY
Sbjct: 502 DDTALPLLLIDTAGCGMVELDTPDDESKGNEGEADLVAIHVERLVSSGVPASEIAVISPY 561
Query: 532 AAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNV 591
QV L+++ S + +E+ +VDGFQGREKEA+++S VRSN VGFL++ RR+NV
Sbjct: 562 NLQVELIRLRLSA--QHPGLEIRSVDGFQGREKEAVVMSFVRSNDTGTVGFLAEDRRINV 619
Query: 592 AVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
AVTRARR +VCD+ T+S FLK L++Y E S EY ++
Sbjct: 620 AVTRARRHLAVVCDSTTMSRHDFLKSLVDYIGNEGEVRSAREYTSD 665
>gi|328875613|gb|EGG23977.1| AN1-type zinc finger-containing protein [Dictyostelium
fasciculatum]
Length = 1035
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 281/675 (41%), Positives = 404/675 (59%), Gaps = 60/675 (8%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
S + F++ L+D+EKE+E++ S+ ++ + + KG I LK TGL G
Sbjct: 23 SIIPKDSFITKTLSLLDIEKESEVNESVHLQSTLSNRELELKGICIRKLKLNSISTGLGG 82
Query: 71 KTLLEFQSTKGD-VLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDI 129
+ L++ S D LP H+F D+V ++ K+ G +L GVVYR+ IT++FD+
Sbjct: 83 RCLVKLVSAVQDEYLPPHRFTPGDIVGIRTTKSKPGQ-SLSSGVVYRVDRFRITISFDEY 141
Query: 130 PEEGL----NSPLRLEKLANEVTYRRMKDALIQL-SKGVQNGPAAG----------LIPV 174
EE + + ++KL+N+VTYR+M++AL L S + +G G ++ V
Sbjct: 142 DEELMADWESFVFAIDKLSNDVTYRKMREALESLRSDRIASGSGGGTTITNQVSSRILDV 201
Query: 175 LFGEQKP------------TVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPG 222
+F +P + KP S L+ +Q A+ AL S ++ ++HGPPG
Sbjct: 202 VFNGAEPHQSATYTSSSENNNNNNNTTLKPITSKLNQTQIKAVEFALGSSDIALIHGPPG 261
Query: 223 TGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVP-HRVRLVRLGHPARLLPQVL 281
TGKTTTVVE I+Q V+RG ++LACA SN+AVDN++E+L+ + + R+GHPAR++ +
Sbjct: 262 TGKTTTVVEFIVQCVRRGQRVLACAPSNLAVDNMLEKLIAVNGINPTRVGHPARIMEGLS 321
Query: 282 ESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNT----RREIQKELRTLSKEERK 337
+ LD + + + + +RKE+ L L +TK K T RR I ++ L K+ R
Sbjct: 322 KYTLDHKTKNSEEAEVVRGLRKEIADL---LKETKSKGTDRDRRRVIGSTIKDLRKDLRS 378
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCI 397
R+ + V VIKN+ VVL+T TGA L + FD+V+IDEA QALE +CWIA+ KG R +
Sbjct: 379 REVVLVEQVIKNSKVVLSTCTGAADYSLRHHDFDIVVIDEAGQALEASCWIAIRKGRRLV 438
Query: 398 LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQL 457
LAGDH QLPPT+ S +A K GL TLFERL +YGD+++ +L++QYRM++ IMNWSSK+
Sbjct: 439 LAGDHQQLPPTIHSDDAAKDGLSVTLFERLIRIYGDKISRLLSIQYRMNQSIMNWSSKEF 498
Query: 458 YNSKIKA------------HPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEE----DSTMN 501
YNS++ A +P +K T +T ++LID +GCDMEE ++E S N
Sbjct: 499 YNSEMHADESVASHLLQGLNPEKIKTTPTTTCPIVLIDTSGCDMEESMEDEIGVDQSKSN 558
Query: 502 EGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK-ILRSKDDKLKNMEVSTVDGFQ 560
GEA V + K+L+Q GV S+IGII+PY QV LK ++ S K +E+ TVDGFQ
Sbjct: 559 IGEARVVATYVKKLLQHGVLESNIGIISPYNGQVKCLKAVIES-----KQIEIGTVDGFQ 613
Query: 561 GREKEAIIISMVRSN-SKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLI 619
GREKE IIISMVRSN VGFL + RR NVA+TRARRQ +V D T+SS FLKR++
Sbjct: 614 GREKEVIIISMVRSNPPPHNVGFLKEDRRTNVAITRARRQVVIVADCLTISSYPFLKRMV 673
Query: 620 EYFEEHAEYLSGSEY 634
+Y E S EY
Sbjct: 674 DYCRETGLVRSALEY 688
>gi|427779915|gb|JAA55409.1| Putative dna replication helicase [Rhipicephalus pulchellus]
Length = 733
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 282/646 (43%), Positives = 393/646 (60%), Gaps = 26/646 (4%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
SL FV L++LE++ E+ + ++ Q KG I L A TGL G+T+
Sbjct: 24 SLDGFVEKHLSLLELERQEEVEQNAKLQEKYSVKELQSKGLCITKLVLDCAHTGLYGRTV 83
Query: 74 LEFQSTK-GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD---DI 129
+F+S G LP+H F D+V + +D + GVV + ++IT+AFD D
Sbjct: 84 CKFRSCHHGAPLPSHGFSNGDIVGVVV-ASDAAREVICSGVVSSVAPANITLAFDEGRDT 142
Query: 130 PEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIA 189
+ L KLAN+VTYRR+K L +L K + + LI +LFG PT +
Sbjct: 143 LDADDGRVFNLLKLANDVTYRRLKRTLEKLRK-TREIRYSNLIEILFGTVSPTEAPISAS 201
Query: 190 FKPF---NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILAC 246
KP N LD SQ++A++ +L K + ++HGPPGTGKTTT+VE+ILQ K+GSK+L C
Sbjct: 202 QKPIEFSNKALDESQQEAVAFSLRQKELAIIHGPPGTGKTTTLVEVILQCSKQGSKVLVC 261
Query: 247 AASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
A SN+AVDN+VERL+ +++VRLGHPARLLP + +LDA + R D+ ++ DIRKE+
Sbjct: 262 APSNVAVDNLVERLLCTSLKVVRLGHPARLLPAIARHSLDAILARSDDFAIIGDIRKEID 321
Query: 307 ALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS---- 362
L K+K K+ +++ +L L KE + R++ A+ ++ +ADVVL+TLT A
Sbjct: 322 ELMSSSSKSKAKDKGYQMRGKLSELRKELKDRERRAIGRILASADVVLSTLTTASDDGPL 381
Query: 363 RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRT 422
+ L F + +IDE +QALE+ACW+ALL+ +CILAGDHLQLPPT+ S A K GL T
Sbjct: 382 KNLPEGHFQVAVIDECSQALEVACWMALLRAPKCILAGDHLQLPPTIVSEAAAKGGLEVT 441
Query: 423 LFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRT 472
L ER L+G+ V ML QYRMHE IM WSS +LY ++ AH S GV+
Sbjct: 442 LMERALRLHGEAVVRMLVTQYRMHELIMRWSSDRLYGGRLLAHASVAAHLLRDLPGVEDN 501
Query: 473 SSTEPTLLLIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPY 531
T LLLID AGC M E +D S NEGEA++ H +RL+ SGV AS+I +I+PY
Sbjct: 502 DDTALPLLLIDTAGCGMVELDTPDDESKGNEGEADLVAIHVERLVSSGVPASEIAVISPY 561
Query: 532 AAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNV 591
QV L+++ S + +E+ +VDGFQGREKEA+++S VRSN VGFL++ RR+NV
Sbjct: 562 NLQVELIRLRLSA--QHPGLEIRSVDGFQGREKEAVVMSFVRSNDTGTVGFLAEDRRINV 619
Query: 592 AVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
AVTRARR +VCD+ T+S FLK L++Y E S EY ++
Sbjct: 620 AVTRARRHLAVVCDSTTMSRHDFLKSLVDYIGNEGEVRSAREYTSD 665
>gi|301116633|ref|XP_002906045.1| DNA polymerase alpha-associated DNA helicase A, putative
[Phytophthora infestans T30-4]
gi|262109345|gb|EEY67397.1| DNA polymerase alpha-associated DNA helicase A, putative
[Phytophthora infestans T30-4]
Length = 988
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 264/610 (43%), Positives = 387/610 (63%), Gaps = 41/610 (6%)
Query: 66 TGLMGKTLLEFQSTKGDVLPA--HKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSIT 123
TGL G+TLL+F + A H+F D+V ++ K L L G+V R+++ I+
Sbjct: 70 TGLFGRTLLQFSFPSLSLRQAKPHQFTVGDLVQIRAQKNTLTGAKLPTGIVSRVEERGIS 129
Query: 124 VAF----DDIPEEGL---NSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLF 176
VA +D+ E L + + L++L N T+ ++ AL Q++K + G A ++ V+F
Sbjct: 130 VAVNSDQEDVDEVELLTATAGVTLDRLVNNATFLKLTSALDQMTK-FEFGAAQTVVDVVF 188
Query: 177 GEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQE 236
E++P+ PFN+ L+ SQ +A+ AL+SK++ ++HGPPGTGKTTTVVE ILQ
Sbjct: 189 SEREPSWNTPLPDITPFNTGLNESQVEAVRFALASKDLALIHGPPGTGKTTTVVEFILQA 248
Query: 237 VKRGS-KILACAASNIAVDNIVERLVP------HRVRLVRLGHPARLLPQVLESALDAQV 289
V R K+L CA SNIAVDN++++L +++L R+GHPAR+LPQ+L LDA++
Sbjct: 249 VTRFDLKVLVCAPSNIAVDNVLDKLASTCSTLRKKLKLTRIGHPARVLPQILNYCLDAKI 308
Query: 290 LRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKN 349
+ + + +DIR+EM ++ KL KT+DK+ R +++E++ KE R R+Q V D+I++
Sbjct: 309 ESAEGTEIVNDIRQEMSSMQKKLQKTRDKSERYRLRREMKANRKEIRTREQKVVGDIIRH 368
Query: 350 ADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTV 409
+DVV T GA S+ L + +FDLVIIDEAAQALE +CWI +LK RC+LAGDHLQLPPT+
Sbjct: 369 SDVVFATNVGAASKLLKDVTFDLVIIDEAAQALEASCWIPMLKAKRCVLAGDHLQLPPTI 428
Query: 410 QSVEAEKKGLGRTLFERLADLYGDE-VTSMLTVQYRMHEHIMNWSSKQLYNSKIKA---- 464
+S A KGL TLF+R+ + + ML QYRMH+ I WSS+ +Y ++K+
Sbjct: 429 KSRAAAAKGLEVTLFDRVTSYTNTQSIVKMLDTQYRMHQDISEWSSQAMYKGELKSFEGV 488
Query: 465 ---------HPSGVKRTSSTEPTLLLIDIAGCDMEE-KKDEED-------STMNEGEAEV 507
H S K + TLLL+D AGC++EE KDEE S NEGEA V
Sbjct: 489 ARRKLHELPHVSISKEDELLDATLLLLDTAGCELEEDAKDEEKASSTLQLSKSNEGEAHV 548
Query: 508 AMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAI 567
H L+++G+ ++ +ITPY QV LK L + +E+ +VDGFQG EKEA+
Sbjct: 549 VARHVSALLKAGLKEEEVAVITPYNKQVQTLKALLL--ESYPKLEIRSVDGFQGCEKEAV 606
Query: 568 IISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAE 627
++S+VRSN+ ++VGFL+D RRMNVA+TRA+R +VCDT+T+SS FL L+++FE++ E
Sbjct: 607 VMSLVRSNASRQVGFLADDRRMNVAITRAKRHVAVVCDTDTISSHKFLSGLVKHFEKYGE 666
Query: 628 YLSGSEYLNE 637
Y S EYL+E
Sbjct: 667 YRSAQEYLDE 676
>gi|301614127|ref|XP_002936547.1| PREDICTED: DNA-binding protein SMUBP-2-like, partial [Xenopus
(Silurana) tropicalis]
Length = 912
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 256/551 (46%), Positives = 357/551 (64%), Gaps = 28/551 (5%)
Query: 109 LGQGVVYRLKDSSITVAFDDIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQ 164
L G+V + + VAFD+ + LN RL KLAN+VTY+R+K AL L + +
Sbjct: 28 LATGIVAGVTQKVVNVAFDESSNDSLNLGTECTYRLLKLANDVTYKRIKRALTALGQ-YR 86
Query: 165 NGPAAGLIPVLFGEQKPT--VLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPG 222
+G A+ LI VLF +P+ V K+ + F FN +LD SQK+A+S +L+ + V ++HGPPG
Sbjct: 87 SGQASSLIDVLFCSSEPSHSVQKRQVEF--FNLSLDDSQKEAVSFSLNQREVAVIHGPPG 144
Query: 223 TGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLE 282
TGKTTTVVEIILQ VK G K+L CA SN+AVDN+VERL + +++RLGHPARLL +
Sbjct: 145 TGKTTTVVEIILQAVKEGLKVLCCAPSNVAVDNLVERLSVFKEKILRLGHPARLLESLQH 204
Query: 283 SALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLA 342
+LDA + R DN+ + +DIR+++ K+ K K + + E++ L KE ++R++ A
Sbjct: 205 HSLDAVLARSDNAQIVADIRRDIDQTFAKMKKLHGKQEKSGYRTEIKALRKELKEREEAA 264
Query: 343 VTDVIKNADVVLTTLTGAV----SRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCIL 398
+ + +K A+V+L T TGA + L FDLV+IDE AQALE +CWI+LL+ +CIL
Sbjct: 265 MVETLKRANVILATNTGASLDGPLKLLPEDYFDLVVIDECAQALEASCWISLLQAKKCIL 324
Query: 399 AGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLY 458
AGDH QLPPT+ S +A GL +L ER+ + YG++V MLTVQYRMH+ IM W+S+ LY
Sbjct: 325 AGDHKQLPPTIISHKAAANGLSLSLMERVTEKYGEKVVKMLTVQYRMHQSIMQWASEALY 384
Query: 459 NSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKK-DEEDSTMNEGEAEV 507
++ AH S GV T T LLLID A C + E + ++E S N GE ++
Sbjct: 385 GGRLTAHSSVSQHLLKDLPGVSVTEETSIPLLLIDTAHCGLFEMEVEDEQSKGNPGEVQL 444
Query: 508 AMAHAKRLIQSGVHASDIGIITPYAAQVVLLK-ILRSKDDKLKNMEVSTVDGFQGREKEA 566
H + L ++GV DI +I PY QV +L+ LR + ++E+ +VDGFQGREKEA
Sbjct: 445 VDLHIQALTKAGVKPQDIAVIAPYNLQVDMLRQCLRQ---RYPDLEIKSVDGFQGREKEA 501
Query: 567 IIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHA 626
+++S VRSNSK EVGFL++ RR+NVAVTRARR ++CD+ TV + FLK LI YF EH
Sbjct: 502 VVLSFVRSNSKGEVGFLAEDRRINVAVTRARRHVAVICDSHTVGNHQFLKDLITYFSEHG 561
Query: 627 EYLSGSEYLNE 637
E + EYL +
Sbjct: 562 EVRTAFEYLED 572
>gi|281203712|gb|EFA77908.1| AN1-type zinc finger-containing protein [Polysphondylium pallidum
PN500]
Length = 988
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 264/610 (43%), Positives = 377/610 (61%), Gaps = 33/610 (5%)
Query: 52 KGSTILNLKCVDAQTGLMGKTLLEF---QSTKGDVLPAHKFGTHDVVVLKPNKADLGSPA 108
KG I L TGL G+ L+ + LP HKF DVV L+ K G +
Sbjct: 61 KGICIRKLVIESFSTGLGGRCLVRLVPVNAAPNQDLPPHKFTPGDVVGLRALKTQPGQ-S 119
Query: 109 LGQGVVYRLKDSSITVAFDDIPE---EGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQN 165
L G+VYR+ S ITVA+DD+ E E L ++KLAN++TYR+M+DA+ +L N
Sbjct: 120 LVTGIVYRVDRSRITVAYDDLAESTIEQLQGVFAIDKLANDITYRKMRDAIERLK--TTN 177
Query: 166 GPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGK 225
P + +LF Q+PT K + + L+ Q +AI ALSS + ++HGPPGTGK
Sbjct: 178 SP---ITDILFSNQEPTHTIKKVKISAVSKKLNQPQIEAIEFALSSNEIALIHGPPGTGK 234
Query: 226 TTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR--VRLVRLGHPARLLPQVLES 283
TTTVVE I+Q K G ++LAC SN++VDNI+ERL+ + V R+GHPAR+L + +
Sbjct: 235 TTTVVEFIVQVCKGGGRVLACGPSNLSVDNILERLLEFKDIVNPTRIGHPARILSGLTKH 294
Query: 284 ALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK-DKNTRREIQKELRTLSKEERKRQQLA 342
LD + G ++ + +I+ E+ L +L + +K RR + +R L K+ + R+
Sbjct: 295 TLDHKTKNGQDAQILKEIKIEIATLMKQLKDGQVEKGARRSVYNTIRDLRKDLKNREFSL 354
Query: 343 VTDVIKNADVVLTTLTGAVSRKLDNTS-FDLVIIDEAAQALEIACWIALLKGSRCILAGD 401
V VI+N++V+L+T TGA L FD VIIDEAAQALE +CWI + +G + +LAGD
Sbjct: 355 VDQVIRNSNVILSTNTGAADYVLSRCEPFDWVIIDEAAQALEASCWIPISRGKKLLLAGD 414
Query: 402 HLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSK 461
H QLPPT+ S +A+ GL T+FERL LY + ++ +L+VQYRM++ IM WSS + Y+ +
Sbjct: 415 HQQLPPTIHSEQAKSDGLETTMFERLIQLYQENISRLLSVQYRMNQEIMRWSSDEFYHGR 474
Query: 462 IKAHPSGVKR------------TSSTEPTLLLIDIAGCDMEEKKDEE-DSTMNEGEAEVA 508
+ A S T++T P L+LID +G DMEE D+E S N GEA++
Sbjct: 475 MLADNSVANHLLLERSTKNRVATTTTCP-LMLIDTSGLDMEESADDESQSKFNVGEADIV 533
Query: 509 MAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAII 568
+ + ++L++ GV S IG+ITPY QV LK++ S ++ ++E+ TVDGFQGREKE +I
Sbjct: 534 VKYIEKLLRYGVEQSSIGVITPYNGQVKQLKMVLS--NRFSDIEIGTVDGFQGREKEVVI 591
Query: 569 ISMVRSNSK-KEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAE 627
IS VRSN+ VGFL++ RRMNVA+TRA+RQ LV DT+T+SS+ FL R++EYF+ + E
Sbjct: 592 ISTVRSNAAPHNVGFLAEERRMNVAITRAKRQVTLVSDTDTLSSNPFLARMVEYFKLNGE 651
Query: 628 YLSGSEYLNE 637
S EYL E
Sbjct: 652 LRSALEYLEE 661
>gi|453088933|gb|EMF16973.1| P-loop containing nucleoside triphosphate hydrolase protein
[Mycosphaerella populorum SO2202]
Length = 705
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 271/701 (38%), Positives = 398/701 (56%), Gaps = 97/701 (13%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
V + F S L+D E +AE++ + ++ Q+ G +LNL +TG GKT
Sbjct: 4 VDVSAFASAQLSLLDDELQAELAETQLLTSTLAPAKLQRAGLAVLNLTVSSQRTGFGGKT 63
Query: 73 LLEFQ-----STKGDVLPAHKFGTHDVVVL--KPNKADLGSPALG------QGVVYRLKD 119
LLE +T GD LP H D+ + +P A+ G +GVV R
Sbjct: 64 LLELGIDPAVATDGDALPEHGLRVGDICAVSEQPKGAEKKKEREGMEQRGAEGVVTRTSK 123
Query: 120 SSITVAFD----DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVL 175
++IT+A + D+P G L L KLAN+VT+RR+ +++L + ++ P L VL
Sbjct: 124 TAITIALNKEDADVPSYG---KLWLVKLANDVTWRRLNQTMVRLMQSTEHSP---LTRVL 177
Query: 176 FGEQKPT-----VLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVV 230
FG Q PT LK+D+ + +S L+ SQ+DA+ AL+S+ + ++HGPPGTGKT TV+
Sbjct: 178 FG-QAPTPVSASALKEDLRW--HHSTLNASQQDAVRYALASREIALIHGPPGTGKTLTVI 234
Query: 231 EIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVL 290
E+ILQ + + ++L C SNI+VDNIVERL +V +VRLGHPARLLP VL +++
Sbjct: 235 ELILQLLDQKQRVLVCGPSNISVDNIVERLASRKVSMVRLGHPARLLPAVLAHSMEVISR 294
Query: 291 RGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNA 350
D +++ +DIR EM + KTK R+ I E++ L KE R R+ V+++++
Sbjct: 295 TSDAAAIVADIRSEMDTKQASIRKTKSGRERKLIYGEMKELRKEYRDREGRVVSEILRGC 354
Query: 351 DVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL--KGSRCILAGDHLQLPPT 408
DVVL+TL GA S +L N FD+VI+DEA+QALE CWI +L + S+ +LAGDHLQLPPT
Sbjct: 355 DVVLSTLHGAGSHQLKNEKFDVVIVDEASQALEAQCWIPILGVRPSKLVLAGDHLQLPPT 414
Query: 409 VQSVEAEKKG-------LGR--------------------------------TLFERLAD 429
++S+ + KKG +GR TLF+RL
Sbjct: 415 IKSLNSVKKGTEPRNKDVGRVEKDIAGLSLEEQKAGASAKKKASKDAITLEITLFDRLLK 474
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPT 478
L+GD++ MLT QYRMHE IMN+ S+ +Y + A P V +T
Sbjct: 475 LHGDDIKRMLTTQYRMHEAIMNFPSEAMYGGHLAAAEAVRTRLLKDLPYEVNEVENTTEP 534
Query: 479 LLLIDIAGCDMEEKKDEED-----------STMNEGEAEVAMAHAKRLIQSGVHASDIGI 527
L+ D G D EK ++ED S +NE EA + H L+ +GV A DI +
Sbjct: 535 LVFYDTQGGDFVEKTEDEDNAKGKSSVLAESKVNEAEALIVRDHVSSLVTAGVKAEDIAV 594
Query: 528 ITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
ITPY Q+ +L + ++ +E+ ++DGFQGREKEA+++S+VRSN + EVGFLS++R
Sbjct: 595 ITPYNGQLAMLSSMLK--ERFPGLELGSIDGFQGREKEAVVVSLVRSNPEHEVGFLSEKR 652
Query: 588 RMNVAVTRARRQCCLVCDTETVS-SDGFLKRLIEYFEEHAE 627
R+NVA+TR +RQ C++ D+ET+S +LK + + EEHA+
Sbjct: 653 RLNVAMTRPKRQLCVIGDSETISRGSQYLKAWMSHLEEHAD 693
>gi|242780461|ref|XP_002479600.1| DNA helicase, putative [Talaromyces stipitatus ATCC 10500]
gi|218719747|gb|EED19166.1| DNA helicase, putative [Talaromyces stipitatus ATCC 10500]
Length = 713
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 283/706 (40%), Positives = 399/706 (56%), Gaps = 94/706 (13%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNL------DTAQKKGSTILNLKCVDA 64
++V + F + L+ E EAE +S + +S N T Q G + L
Sbjct: 3 TSVQIPLFAAAQRKLLQKEHEAEKLSSALATSSTNTVSPSTRRTLQATGYALTGLVLEQW 62
Query: 65 QTGLMGKTLLEF--------QSTKGDVLPAHKFGTH-----DVVVL----------KPNK 101
+TG+ G+ + EF +ST+ D +FG H DVV + + K
Sbjct: 63 RTGMGGRIVGEFGADAAFATESTE-DTDGRARFGAHGIRVGDVVRVLEISAGRKSGREGK 121
Query: 102 ADLGSPALG-QGVVYRLKDSSITVAFDDI-------PEEGLNS----PLRLEKLANEVTY 149
G+ A G +GVV + D +++VAF EE ++ L L KLAN+VT+
Sbjct: 122 EAEGNKANGAEGVVIKASDKALSVAFGQTGGGANARAEEAVDDLWGKKLWLVKLANDVTH 181
Query: 150 RRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDI--AFKPFNSNLDHSQKDAISK 207
RR+ + ++ K + + VLFG P+ D A + + L+HSQK+AI
Sbjct: 182 RRLNQTMEKMEK-MPESEHTYFMRVLFGHTTPSSPDYDAIGAIEFIDPTLNHSQKEAIRF 240
Query: 208 ALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRL 267
AL+SK + ++HGPPGTGKT T++E+ILQ ++R +IL C SN++VDNIVERL PHRV +
Sbjct: 241 ALASKEIALIHGPPGTGKTHTLIELILQMIRRNMRILVCGPSNVSVDNIVERLAPHRVPI 300
Query: 268 VRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKE 327
VR+GHPARLL VL+ +L+ + + + D+RKE+ + KT++ RREI +
Sbjct: 301 VRVGHPARLLSSVLDHSLEVLTQTSEAAEIVRDVRKEIDEKQASIRKTRNGRERREIYGD 360
Query: 328 LRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACW 387
L+ L KE R+R+ V D++ + VVL TL GA +L N FD+VIIDEA+QALE CW
Sbjct: 361 LKELRKEFRERESKCVEDLVTGSKVVLATLHGAGGHRLKNQKFDVVIIDEASQALEAQCW 420
Query: 388 IALLKGSRCILAGDHLQLPPTVQS--------------VEAEKK---------GLGRTLF 424
I LL SR +LAGDHLQLPPT++S EAEK LG+T+F
Sbjct: 421 IPLLTASRAVLAGDHLQLPPTIKSSNIDSSKKTSKTKVKEAEKSSSLDSLQGVSLGQTMF 480
Query: 425 ERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTS 473
+RL L+G + MLT QYRMHE IM + S ++Y K+ A P GV+ T
Sbjct: 481 DRLLALHGPSIKRMLTTQYRMHEKIMQFPSNEMYEGKLIAADSVKDRLLKDLPYGVEDTD 540
Query: 474 STEPTLLLIDIAGCDMEEKKDEEDSTM----------NEGEAEVAMAHAKRLIQSGVHAS 523
T+ L+ ID G D EK ++ED+T+ NE EA VA+ H + LI +GV
Sbjct: 541 DTKEPLVFIDTQGGDFPEKAEDEDATIKGGLLSESKSNEMEARVAIRHVEGLIDAGVRPE 600
Query: 524 DIGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGF 582
DI +ITPY AQV L+ + LR +K +E+ +VDGFQGREKEAI++S+VRSN K EVGF
Sbjct: 601 DIAVITPYNAQVALIAQCLR---EKYPGIEIGSVDGFQGREKEAIVVSLVRSNEKHEVGF 657
Query: 583 LSDRRRMNVAVTRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE 627
L ++RR+NVA+TR +R C+ D+ET+S FLK I + EEHA+
Sbjct: 658 LGEKRRLNVAMTRPKRHLCVCGDSETISKGSKFLKNWIGFLEEHAD 703
>gi|302829959|ref|XP_002946546.1| hypothetical protein VOLCADRAFT_79084 [Volvox carteri f.
nagariensis]
gi|300268292|gb|EFJ52473.1| hypothetical protein VOLCADRAFT_79084 [Volvox carteri f.
nagariensis]
Length = 832
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 253/502 (50%), Positives = 341/502 (67%), Gaps = 29/502 (5%)
Query: 5 KTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDA 64
+T+ + +++ FV + LID+E+EAEI+ + + + + AQ +G +LNL+ D
Sbjct: 116 ETRAQDDPATVETFVELSRRLIDMEREAEIAQANAETSLCSPEAAQARGRALLNLRVDDV 175
Query: 65 QTGLMGKTLLEFQSTKG-------DVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRL 117
+ GL+G+TLL S KG LP HKFG HDVV L+P++ +P L GV+YR+
Sbjct: 176 EVGLLGRTLLTLVSNKGYGAGAGTAELPPHKFGPHDVVALRPSRGPSDAPPLVSGVIYRV 235
Query: 118 KDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMK---DALIQLSKGVQNGPAAGLIP- 173
++++I VA D+ PEEGL+ LRL+KLANEVTY+RM+ DAL+++ +G P +P
Sbjct: 236 RETAIIVAVDEAPEEGLDQQLRLDKLANEVTYQRMRGTLDALLRVRRGTAATPDGRFLPG 295
Query: 174 -----VLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTT 228
V+FG ++P + A+ N LD SQ+ A+S ALSS++V ++H PPGTGKTT
Sbjct: 296 GAVVDVVFGRREPRFTESAPAWTAINRGLDESQRAAVSLALSSQDVALVHEPPGTGKTTA 355
Query: 229 VVEIILQEVKRGSKILACAASNIAVDNIVERLV--PHRVRLVRLGHPARLLPQVLESALD 286
VVEIILQEV RGS++LA AASNIAVDN+VERLV +++LVRLGHPARLLPQVL+S+L+
Sbjct: 356 VVEIILQEVARGSRVLAAAASNIAVDNLVERLVRAEPKLKLVRLGHPARLLPQVLDSSLE 415
Query: 287 AQVLRGDNSSLASDIRKEMKALNGKLLK--TKDKNTRREIQKELRTLSKEERKRQQLAVT 344
A VLR DNSSLA D R EMK +N +LLK +D+ RR ++ +LR L+KEER RQ+ AV
Sbjct: 416 AHVLRSDNSSLARDCRAEMKDINQRLLKLGPRDRAERRALRSDLRRLAKEERLRQEAAVV 475
Query: 345 DVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQ 404
+VIK A VV TLTG R+L++ FD+ ++DEAAQALE A W ALL+ R +LAGDHLQ
Sbjct: 476 EVIKGARVVCCTLTGVSHRQLESELFDVAVVDEAAQALEAATWSALLRARRAVLAGDHLQ 535
Query: 405 LPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKA 464
LPPTV S EA K GL RTLFERL L ++MLTVQYRM++ IM WSS +LY ++ A
Sbjct: 536 LPPTVVSEEAAKMGLARTLFERLQRLL-PAASAMLTVQYRMNKAIMQWSSDELYEGRLTA 594
Query: 465 HPSGVKRTSSTEPTLLLIDIAG 486
H + T L+D+AG
Sbjct: 595 HSTVADHT--------LVDVAG 608
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/162 (62%), Positives = 123/162 (75%), Gaps = 2/162 (1%)
Query: 477 PTLLLIDIAGCDMEEKKDEEDSTM-NEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQV 535
P LLLID AGC EE+++ E S+ N GEA+ MAH +RL+Q + +IGIITPY AQV
Sbjct: 671 PVLLLIDTAGCGYEEQQEAEGSSYANPGEAKAVMAHVRRLVQRRISPHNIGIITPYNAQV 730
Query: 536 VLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
LLK LR ++ +E+S+VDGFQGREKEAIIISMVRSN EVGFLSDRRRMNVAVTR
Sbjct: 731 ALLKELR-QEQAATALEISSVDGFQGREKEAIIISMVRSNDSGEVGFLSDRRRMNVAVTR 789
Query: 596 ARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
ARR C +VCDTETVS D FLKRL++YF + EY S +E +++
Sbjct: 790 ARRHCAIVCDTETVSHDEFLKRLVDYFSANGEYSSAAELVSD 831
>gi|340380524|ref|XP_003388772.1| PREDICTED: DNA-binding protein SMUBP-2-like [Amphimedon
queenslandica]
Length = 1025
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 277/663 (41%), Positives = 386/663 (58%), Gaps = 43/663 (6%)
Query: 15 LQEFVSVMAPLIDLEKEAEISA--SITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
+++FV LI+ E++ E++ S+ S +N+ + KG + L + GL G+
Sbjct: 1 MEDFVEKHLELIEQERQEEVAQGLSLLSTDLKNIKELETKGVCLSKLGIESERIGLFGRH 60
Query: 73 LLEFQSTKG-DVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPE 131
++ F G LP H D+V + L L GVV + D + VAF+++PE
Sbjct: 61 IVTFSHRLGRHKLPTHSITCGDIVGIFSKGQSLLPGQLVSGVVVKSSDVHLGVAFEELPE 120
Query: 132 E----GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKD 187
E GL L++ KLAN++TY+RMK AL L K + ++ L+ VLF P
Sbjct: 121 EVSLGGLGDCLQVVKLANDITYKRMKRALNDL-KSMDPILSSHLVDVLFQATPPGPSHSK 179
Query: 188 IA--------------FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII 233
FK FN +LD SQK A+ ALS +V ++HGPPGTGKTTTV+E I
Sbjct: 180 WTYQLDQLQTQFDSSDFKFFNQSLDSSQKRAVFFALSRPDVAIIHGPPGTGKTTTVIEYI 239
Query: 234 LQE-VKRGSKILACAASNIAVDNIVERLVPH--RVRLVRLGHPARLLPQVLESALDAQVL 290
LQE + +K+LA A SNIAVDN+VERL +++++RLGHPARL+ VL+ +LD+ +
Sbjct: 240 LQETLTLNNKVLAVAPSNIAVDNLVERLAASSPKLKIIRLGHPARLVQSVLQYSLDSILA 299
Query: 291 RGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNA 350
D S + D+RKEM + K K + RR+ E +TL KE +R++ V ++ A
Sbjct: 300 STDGSDIVLDVRKEMSSAWSKAGNAKSSSERRKWHTEAKTLKKELIEREEKLVQQILSGA 359
Query: 351 DVVLTTLTGAVS----RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLP 406
+V+L T TGA + L FD+V+IDE AQ+LE +CWI L + +CILAGDH QLP
Sbjct: 360 NVILATNTGATPTGPLKHLPIDHFDVVVIDECAQSLEASCWIPLSRAPKCILAGDHKQLP 419
Query: 407 PTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH- 465
PT+ S +A + GL TL ERL +Y D+VT++LT QYRM+ +IM W S+ LY + AH
Sbjct: 420 PTILSDKAARDGLAVTLMERLVSVYRDQVTTLLTTQYRMNHNIMKWPSQYLYEDSLTAHE 479
Query: 466 ----------PSGVKRTSSTEPTLLLIDIAGCDMEE-KKDEEDSTMNEGEAEVAMAHAKR 514
P+ T++T P LL ID A C + E E+S NEGEAE+ +AH K
Sbjct: 480 SVSHHLLKDLPTVTITTATTIP-LLFIDTASCGLYELDTPSEESKGNEGEAEIVLAHVKE 538
Query: 515 LIQSGVHASDIGIITPYAAQVVLLK-ILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVR 573
LI +GV DI II PY QV +++ L + +EV TVDGFQGREKEA+IIS R
Sbjct: 539 LIGAGVREGDIAIIAPYHLQVGMIRERLEANGISTGKVEVHTVDGFQGREKEAVIISFTR 598
Query: 574 SNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSE 633
SN K E GFL ++RR NVAVTRARR +V D+ET+S + F+K L+EY + E S E
Sbjct: 599 SNKKGEFGFLKEQRRTNVAVTRARRHLAMVGDSETISREPFIKGLLEYCTNNGEVYSAHE 658
Query: 634 YLN 636
Y++
Sbjct: 659 YID 661
>gi|407927432|gb|EKG20325.1| ATPase AAA+ type core [Macrophomina phaseolina MS6]
Length = 686
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 264/682 (38%), Positives = 395/682 (57%), Gaps = 74/682 (10%)
Query: 18 FVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQ 77
F + L+D E +AE++ + ++ T Q+ G ILNL+ +TGL GKT++E +
Sbjct: 10 FAATQLSLLDAELQAELAETSLLLSAHPPQTLQRAGLAILNLQIASQRTGLGGKTVVELE 69
Query: 78 -----STKGDVLPAHKFGTHDVVVL---------KPNKADLGSPALGQGVVYRLKDSSIT 123
G LP H T D+V + K K++L + GVV ++ ++++
Sbjct: 70 LDPAVKGAGAELPEHGIRTGDIVGVQEQPAGSARKKEKSELKKNGV-DGVVLKVNATAVS 128
Query: 124 VAFD----DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQ 179
VA D D+P+ L L KLAN+VTY+RM + +L + I LFG
Sbjct: 129 VALDKEDVDVPQ----GKLWLVKLANDVTYKRMTQTMTRL-QNFSESEYTPFIRALFGLS 183
Query: 180 KPTVLKKDIA------FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII 233
+ L + + + + +L+ SQKDAI A++S+ V ++HGPPGTGKT T++E+I
Sbjct: 184 SLSPLPSNYSEVGLDKLQWIDPSLNDSQKDAIRFAMASREVALIHGPPGTGKTHTLIELI 243
Query: 234 LQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGD 293
LQ +K+ ++L C SNI+VDNIVERL PH+V ++RLGHPARLLP V+ +LD D
Sbjct: 244 LQLLKQDLRLLVCGPSNISVDNIVERLAPHKVPIIRLGHPARLLPSVINHSLDVLTRTSD 303
Query: 294 NSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVV 353
+++ DIRKEM A + KT++ R+ I E+R L K+ R+R++ V ++K + VV
Sbjct: 304 AAAIVQDIRKEMDAKQASIKKTRNGRERKAIYSEMRELRKDYRERERRCVDQLVKGSKVV 363
Query: 354 LTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVE 413
L TL GA L + FD+VIIDEA+QALE CW+ LL + +LAGDHLQLPPT++S+
Sbjct: 364 LATLHGAGGYHLKDQQFDVVIIDEASQALEAQCWVPLLSAKKVVLAGDHLQLPPTIKSLN 423
Query: 414 AEKK------------------GLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSK 455
++ + L +TLF+RL L+G + MLT QYRMHE IM + S+
Sbjct: 424 SKTQKESETSDKAAQKERGKSVTLEQTLFDRLLALHGPSIKRMLTTQYRMHEKIMAFPSQ 483
Query: 456 QLYNSKIKAH-----------PSGVKRTSSTEPTLLLIDIAGCDMEEKKDEE-------- 496
+LY SK+ A P V+ T T ++ D G D EK ++E
Sbjct: 484 ELYESKLVAAESVKARLLADLPYEVQETEDTREPVVFWDTQGGDFPEKSEDEDTGKKSSL 543
Query: 497 --DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVS 554
DS NE EA + H +L+++GV A DI ++TPY AQ+ +L L ++ +E+
Sbjct: 544 LGDSKSNEMEAALVRLHVGKLVEAGVRAEDIAVVTPYNAQLAVLSQLLK--EQFAGIELG 601
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG- 613
+VDGFQGREKEA+++S+VRSN++ EVGFL ++RR+NVA+TR +R C++ D+ETV
Sbjct: 602 SVDGFQGREKEAVVVSLVRSNAEHEVGFLGEKRRLNVAMTRPKRHLCVIGDSETVGRGSR 661
Query: 614 FLKRLIEYFEEHAE--YLSGSE 633
FLKR +++ +E A+ Y G+E
Sbjct: 662 FLKRWMDFLQEQADLRYPDGAE 683
>gi|400602498|gb|EJP70100.1| DNA helicase [Beauveria bassiana ARSEF 2860]
Length = 691
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 270/679 (39%), Positives = 394/679 (58%), Gaps = 71/679 (10%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
V + F S L++ E ++E+ + + + + + Q+ G I NL +TGL G+T
Sbjct: 7 VDVPSFASTQLALLERELQSEVQETSSLITNHSPASLQRAGLAITNLVVASQRTGLGGRT 66
Query: 73 LLEFQ-----STKGDVLPAHKFGTHDVVVLKPNKADLGSPAL----------GQGVVYRL 117
+LE S+ G+ LP H T D+V++ A GS +GVV ++
Sbjct: 67 VLELSPDSATSSTGE-LPEHGLRTGDIVLVADQPA--GSAKKKEIQELEKKGARGVVTKV 123
Query: 118 KDSSITVAFDDIPEE-GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLF 176
+ +S+ A D+ +E + + KLA+EVTYRRM + +L K + +G I VLF
Sbjct: 124 QKTSVFAALDEGKDEVAFGGKVWMVKLADEVTYRRMNLVMEKLQK-MSEAEYSGFIRVLF 182
Query: 177 GEQKPTVLKKDIA-------FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTV 229
G P+ + KD++ + F+ L+ SQKDAI AL+S+ + ++HGPPGTGKT T+
Sbjct: 183 GLSSPSPVPKDLSADEELSKIEWFDPTLNDSQKDAIRFALASREIALIHGPPGTGKTHTL 242
Query: 230 VEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQV 289
+E+ILQ +K ++L C SNI+VDNIVERL PH+V ++RLGHPARLLP V+ +LDA
Sbjct: 243 IELILQLIKLNKRVLVCGPSNISVDNIVERLSPHKVPILRLGHPARLLPSVVNHSLDALT 302
Query: 290 LRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKN 349
+ ++ D+R EM A + KTK RR+I +LR L KE R+R++ V+ ++
Sbjct: 303 QTSEAGAIVKDVRAEMDAKQASIKKTKSGKERRQIYGDLRELRKEYRERERKCVSHLVGG 362
Query: 350 ADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTV 409
+ VVL TL GA +L FD+VIIDEA+QALE CW+ LL ++ + AGDHLQLPPT+
Sbjct: 363 SKVVLATLHGAGGHQLRAEKFDVVIIDEASQALEAQCWVPLLSANKAVCAGDHLQLPPTI 422
Query: 410 QS------------VEAEK-KG--LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSS 454
+S EA+ KG L TLF+RL L+G + MLT QYRMHE IM + S
Sbjct: 423 KSSNSAVSLKLKDGTEAKPIKGQTLETTLFDRLLALHGPSIKRMLTTQYRMHEKIMRFPS 482
Query: 455 KQLYNSKIKAHPS-----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEE------- 496
+LY SK+ A + V+ T L+ ID G D E+ +E+
Sbjct: 483 DELYESKLVAAGAVNARLLKELAYEVEDNEDTNEPLIFIDTQGGDFPERSEEDDADNPKK 542
Query: 497 -------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK 549
DS NE EA + H RL+++G+ A DI ++TPY AQ+ +L L+ +K
Sbjct: 543 GKVSLHGDSKSNEMEAALVQQHVSRLVEAGLRAEDIAVVTPYNAQLAVLAPLK---EKFP 599
Query: 550 NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
+E+ +VDGFQGREKEAII+S+VRSNSK EVGFL ++RR+NVA+TR +R ++ D+ETV
Sbjct: 600 GIELGSVDGFQGREKEAIIVSLVRSNSKGEVGFLGEKRRLNVAMTRPKRSLTVIGDSETV 659
Query: 610 S-SDGFLKRLIEYFEEHAE 627
FLKR + + E++A+
Sbjct: 660 KRGSSFLKRWMNFLEDNAD 678
>gi|449302987|gb|EMC98995.1| hypothetical protein BAUCODRAFT_31266 [Baudoinia compniacensis UAMH
10762]
Length = 707
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 279/704 (39%), Positives = 394/704 (55%), Gaps = 91/704 (12%)
Query: 18 FVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQ 77
F S L+D E +AE++ + +S Q+ G +LNL +TG GK+LLE
Sbjct: 10 FASSQLLLLDAELQAELTETQLLTSSHAPAILQRAGLALLNLTLSSQRTGFGGKSLLELS 69
Query: 78 STK----GDVLPAHKFGTHDVVVL---------KPNKADLGSPALGQGVVYRLKDSSITV 124
GD LP H D+ + K +A + A+ +GVV +++ ++TV
Sbjct: 70 LDPAVGVGD-LPEHGLRVGDICAVAEQPKGAERKKERASIEKRAV-EGVVTKVQKQAVTV 127
Query: 125 AFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVL 184
A D E N L L KLAN+VTY+R+ + +L K +Q + L VLFG+ PT L
Sbjct: 128 ALDKEEVEVPNGKLWLIKLANDVTYKRLSQTMSKLEK-MQPSEHSILTQVLFGKSSPTSL 186
Query: 185 -----KKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR 239
+KD+ + + ++ SQK+A+ AL+S++V ++HGPPGTGKT T++E+ILQ + R
Sbjct: 187 SDAEIQKDLEW--HDKTMNDSQKEAVRFALASRDVALIHGPPGTGKTHTLIELILQFLDR 244
Query: 240 GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLAS 299
G + L C SNI+VDNIVERL H+V +VRLGHPARLLP VL+ +LD D +S+ +
Sbjct: 245 GQRALVCGPSNISVDNIVERLTSHKVSMVRLGHPARLLPSVLDHSLDVLSKTSDAASIVT 304
Query: 300 DIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
DIR EM + KT++ RR I EL+ L KE R+R+ V+D++K + VVL+TL G
Sbjct: 305 DIRAEMDVKQSSIRKTRNGRERRAIYGELKELRKEYRQREGRVVSDLLKQSRVVLSTLHG 364
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACWIALLK--GSRCILAGDHLQLPPTVQSVEAEKK 417
A L + FD+VIIDEA+QALE CWI +L S+ +LAGDHLQLPPT++S+ ++
Sbjct: 365 AGGFHLRDEKFDVVIIDEASQALEAQCWIPVLATGTSKLVLAGDHLQLPPTIKSLNSQAS 424
Query: 418 --------------------------------------GLGRTLFERLADLYGDEVTSML 439
L TLF+RL L+G + ML
Sbjct: 425 TPIKVADGSNGTNNDMSRSSVDDDSATVGQKKIKDDDATLETTLFDRLLKLHGSSIKRML 484
Query: 440 TVQYRMHEHIMNWSSKQLYNSK-----------IKAHPSGVKRTSSTEPTLLLIDIAGCD 488
T+QYRMHE IM + S LY K +K P GV T T L+ D G D
Sbjct: 485 TIQYRMHEKIMAFPSVALYEKKLIAADSVKDRLLKDLPYGVHDTDDTREPLVFWDTQGGD 544
Query: 489 MEEKKDEED------------STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVV 536
EK +E+D S +NE EA V H +RL++ G DI ++TPY Q+
Sbjct: 545 YPEKTEEDDIGVKGRSGLLAESKVNENEAAVVRLHVQRLVEGGTKPEDIAVVTPYNGQLA 604
Query: 537 LLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
LL L D+ +E+ +VDGFQGREKEA+I+S+VRSNS +EVGFLS++RR+NVA+TR
Sbjct: 605 LLSGLLK--DRFPGLELGSVDGFQGREKEAVIVSLVRSNSDREVGFLSEKRRLNVAMTRP 662
Query: 597 RRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE--YLSGSEYLNE 637
+R C+V D+ETV FL+ +++ EEHA+ Y +E L +
Sbjct: 663 KRHLCVVGDSETVGKGSKFLRSWMQHLEEHADLRYPDQAEVLED 706
>gi|406858745|gb|EKD11835.1| DNA-binding protein SMUBP-2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 690
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 268/685 (39%), Positives = 392/685 (57%), Gaps = 77/685 (11%)
Query: 10 QSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLM 69
+ AV + F + L+D E ++E+S + + + + + Q+ G I NL +TGL
Sbjct: 4 KDAVDISSFCTTQLALLDAELQSELSETSSLITNTSPASLQRAGIAITNLVLSSLRTGLG 63
Query: 70 GKTLLEF---------QSTKGD-VLPAHKFGTHDVVVLKPNKADLGSPAL---------- 109
GKT++E +S GD LP H T D+VV+ A GS
Sbjct: 64 GKTVVELSPDSATASKKSKDGDGELPEHGIRTGDIVVVSEQPA--GSAKKREVREMEEKG 121
Query: 110 GQGVVYRLKDSSITVAFD----DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQN 165
+GV+ ++ ++ VA D D+P + + KLAN+VTY+R + L ++
Sbjct: 122 ARGVITKVTRGAVWVALDGEEDDVPGA---KRMWIVKLANDVTYKRQT---LNLLLKMKP 175
Query: 166 GPAAGLIPVLFGEQKPTVLKKDIA------FKPFNSNLDHSQKDAISKALSSKNVFMLHG 219
+G + VLFG P+ + D++ + + +L+ SQKDAI AL+S+ V ++HG
Sbjct: 176 DEYSGFVQVLFGLGSPSPVSGDLSGGDRGRLEWIDPSLNDSQKDAIRFALASREVALIHG 235
Query: 220 PPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQ 279
PPGTGKT T++E+ILQ +K+ ++L C SNI+VDNIVERL PH++ +VRLGHPARLLP
Sbjct: 236 PPGTGKTHTLIELILQMLKQNLRVLVCGPSNISVDNIVERLAPHKIPIVRLGHPARLLPS 295
Query: 280 VLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQ 339
VL +LD + +++ D+RKEM + KTK R+ I +L+ L KE R+R+
Sbjct: 296 VLNHSLDVLTQTSEAAAIVKDVRKEMDTKQASIKKTKSGRERKAIYGDLKELRKEFRERE 355
Query: 340 QLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILA 399
+ + +IK + VVL TL GA + + FD+VIIDEA+QALE CW+ LL+ S+ +LA
Sbjct: 356 RKCIGSLIKGSKVVLATLHGAGGFQTKDEVFDVVIIDEASQALEAQCWVPLLRASKVVLA 415
Query: 400 GDHLQLPPTVQSVEAEKK--------------GLGRTLFERLADLYGDEVTSMLTVQYRM 445
GDHLQLPPT++++ ++ K L TLF+RL L+G + MLT QYRM
Sbjct: 416 GDHLQLPPTIKTLNSKTKKSKAVETEGIIKGMTLETTLFDRLLALHGPAIKRMLTTQYRM 475
Query: 446 HEHIMNWSSKQLYNSK-----------IKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKD 494
HE IM + S +LY SK +K P V T T L+ D G D EK +
Sbjct: 476 HEKIMRFPSDELYESKLIAADGVKTRILKELPYEVAETEDTTKPLIFYDTQGGDFPEKNE 535
Query: 495 EE------------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
EE DS NE EA + H + L+ +GV DI +ITPY AQ+ L+K
Sbjct: 536 EEEVDKKAGKGMMGDSKSNEMEAALVRQHVQSLVDAGVEPEDIAVITPYNAQLALIK--S 593
Query: 543 SKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCL 602
S + +E+ +VDGFQGREKEA+I+S+VRSNS KEVGFL ++RR+NVA+TR +R +
Sbjct: 594 SIKEAFPGIELGSVDGFQGREKEAVIVSLVRSNSDKEVGFLGEKRRLNVAMTRPKRSLVV 653
Query: 603 VCDTETVSSDGFLKRLIEYFEEHAE 627
+ D+ET+ + FLKR +E+ EEH++
Sbjct: 654 IGDSETLQGNKFLKRWMEFLEEHSD 678
>gi|327260153|ref|XP_003214900.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2-like
[Anolis carolinensis]
Length = 997
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 271/654 (41%), Positives = 389/654 (59%), Gaps = 37/654 (5%)
Query: 12 AVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGK 71
A +++ FVS L+ E+EAEI+ + S +L ++KG +L L+ +TGL G+
Sbjct: 2 ATAVEPFVSRQLELLQEEREAEIAEARVWQESISLKELERKGVCLLKLEIASQRTGLYGR 61
Query: 72 TLLEFQSTKGDV---LPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDD 128
L+ Q K + LP++ FG D+V L L G+V R+ S+TVA D+
Sbjct: 62 FLVTLQPRKCGLQAELPSNSFGPGDIVGLYETAGQ--GDQLSTGIVTRITAKSVTVAIDE 119
Query: 129 IPEEGL-----NSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
P+ L + RL KLAN+VTY+R+K AL LS+ ++GPA+GLI VLF +P+
Sbjct: 120 -PQSSLLSLDQGNTYRLLKLANDVTYKRLKRALNTLSQ-YRSGPASGLIDVLFCASEPSD 177
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGP----PGTGKTTTVVEIILQEVKR 239
+ + P + I L LH K + + +K
Sbjct: 178 ANNTMVY-PLIFLTRCCSRKTIQALLFC--CLXLHADFVSVYSXSKPLEISSNCRETLKM 234
Query: 240 G-SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLA 298
K+L CA SNIAVDN+VERL H+ R++RLGHPARLL + + +LDA + GDN+ +
Sbjct: 235 FLFKVLCCAPSNIAVDNLVERLASHKARILRLGHPARLLESIQQHSLDAILAHGDNAQIV 294
Query: 299 SDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLT 358
+DIRK++ K KT+DK R E++TL KE ++R+++A+T+++ +ADV+L T T
Sbjct: 295 ADIRKDIDQAFVKNRKTQDKGERSHFLNEIKTLRKELKEREEMAMTEILTHADVILATNT 354
Query: 359 GAVS----RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA 414
GA S + L FD+V+IDE +QALE +CWI LLK +C+LAGDH QLPPT+ S +A
Sbjct: 355 GASSDGPLKLLPENHFDMVVIDECSQALEASCWIPLLKAKKCVLAGDHKQLPPTIISHKA 414
Query: 415 EKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS------- 467
KGL +L ERL + YGD V MLTVQYRMH+ IM W+S ++Y+ ++ AH S
Sbjct: 415 ASKGLSLSLMERLIEKYGDRVVKMLTVQYRMHQDIMQWASTEMYDGRLLAHHSVAQHLLK 474
Query: 468 ---GVKRTSSTEPTLLLIDIAGCDMEE-KKDEEDSTMNEGEAEVAMAHAKRLIQSGVHAS 523
GV T T LLLID AGC + E ++E S N+GE + H + L+ +GV A
Sbjct: 475 DLPGVASTEETSIPLLLIDTAGCGLFELDVEDEQSKGNQGEVRLVGLHIQALVDAGVKAR 534
Query: 524 DIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFL 583
DI +ITPY QV +L+ L ++ +E+ +VDGFQGREKEA+++S VRSN K EVGFL
Sbjct: 535 DIAVITPYNLQVDMLRELLCQN--YPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFL 592
Query: 584 SDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
++ RR+NVA+TRARR ++CD+ T + FLKRL++Y EH E + EYL++
Sbjct: 593 AEDRRINVAITRARRHVAVICDSRTTGNHSFLKRLVDYMNEHGEVRTAFEYLDD 646
>gi|440634913|gb|ELR04832.1| DNA helicase [Geomyces destructans 20631-21]
Length = 674
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 267/669 (39%), Positives = 386/669 (57%), Gaps = 66/669 (9%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
+ V++ F + L+D E ++E++++ S + + Q+ G I NL +TGL G
Sbjct: 2 APVNVPSFAATQLHLLDQELQSELASTSALLTSTSPSSLQRAGVAITNLVIASQRTGLGG 61
Query: 71 KTLLEFQ----STKGDVLPAHKFGTHDVVVLKPNKADLGSPAL--------------GQG 112
KT+LE +GD LP H D+V++ G PA G+G
Sbjct: 62 KTVLELSLDSAIGEGD-LPEHGVRVGDIVMVA------GQPAGSAKKREVKELEENGGRG 114
Query: 113 VVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI 172
VV ++ + + VA + EE + L + KLAN+VTY+RM + +L K + + +
Sbjct: 115 VVTKVGRAVVGVAMERE-EEEVGGRLWIVKLANDVTYKRMNQTMEKLQK-INEASYSAFL 172
Query: 173 PVLFGEQKPTVL----KKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTT 228
VLFG P+ + K+ + +++L+ SQKDAI AL+S+ V ++HGPPGTGKT T
Sbjct: 173 RVLFGLSSPSPVHESPKEAEKIEWIDTSLNDSQKDAIKFALASREVALIHGPPGTGKTHT 232
Query: 229 VVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQ 288
++E+ILQ VK ++L C SNI+VDNIVERL PH++ ++RLGHPARLLP VL +LD
Sbjct: 233 LIELILQLVKLKLRVLVCGPSNISVDNIVERLSPHKLPILRLGHPARLLPSVLNHSLDIL 292
Query: 289 VLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIK 348
D +++ D+RKEM + L KTK RR I ELR L KE R+R++ V +++
Sbjct: 293 TQTSDAAAIVRDVRKEMDSKQASLRKTKSGRERRGIYGELRELRKEFREREKKCVANLVM 352
Query: 349 NADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPT 408
+ VVL TL GA +L FD+V+IDEA+QALE CW+ LL+ + +LAGDHLQLPPT
Sbjct: 353 GSKVVLATLHGAGGFQLRGEQFDVVLIDEASQALEAQCWVPLLQADKVVLAGDHLQLPPT 412
Query: 409 VQSVEAEKKG---------LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYN 459
++S+ ++ K L TLF+RL ++G+ + MLT QYRMHE IM + S +LY
Sbjct: 413 IKSLNSKVKSKEVIIKGMTLETTLFDRLLAMHGEGIKRMLTTQYRMHETIMRFPSDELYE 472
Query: 460 SKIKAH-----------PSGVKRTSSTEPTLLLIDIAGCDMEEKKDEE------------ 496
K+ A P V+ T T L+ D G D E +EE
Sbjct: 473 GKLIAAEAVKARLLTDLPYEVQDTEDTREPLVFWDTQGGDFPEASEEEGVSKKAGKGLMG 532
Query: 497 DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTV 556
+S NE EA + H K L+++GV DI ++TPY AQ+ L+ ++ +E+ +V
Sbjct: 533 ESKSNEMEAVLVKLHVKNLVKAGVKPEDIAVVTPYNAQLALMS--GPLKEEFPGIELGSV 590
Query: 557 DGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS-SDGFL 615
DGFQGREKEAII+S+VRSN EVGFL ++RR+NVA+TR RR C++ D ETV+ GFL
Sbjct: 591 DGFQGREKEAIIVSLVRSNGDGEVGFLGEKRRLNVAMTRPRRHLCVIGDAETVAKGSGFL 650
Query: 616 KRLIEYFEE 624
KR + + EE
Sbjct: 651 KRWMAFLEE 659
>gi|398411081|ref|XP_003856885.1| hypothetical protein MYCGRDRAFT_34379 [Zymoseptoria tritici IPO323]
gi|339476770|gb|EGP91861.1| hypothetical protein MYCGRDRAFT_34379 [Zymoseptoria tritici IPO323]
Length = 685
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 264/642 (41%), Positives = 380/642 (59%), Gaps = 72/642 (11%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEFQ-----STKGDVLPAHKFGTHDV--VVLKPNKA 102
Q+ G +LNL +TG GKTLLE ++ D +P H D+ V +P A
Sbjct: 41 QRAGLAVLNLTVSSQRTGFGGKTLLELALDPAVASDSDEIPEHGLRVGDICAVAEQPKGA 100
Query: 103 DLGSPALG------QGVVYRLKDSSITVAFD----DIPEEGLNSPLRLEKLANEVTYRRM 152
+ G +GV+ R ++ITVA D D+P N L L KLAN+VT++R+
Sbjct: 101 EKKKEREGMEKRGAEGVITRTNRTNITVALDKEDVDVP----NGKLWLVKLANDVTHKRL 156
Query: 153 KDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKD---IAFKPFNSNLDHSQKDAISKAL 209
+ +L K +Q + L VLFG PT + + A + + L+ SQKDAI AL
Sbjct: 157 SQTMTRLQK-MQPSEHSILTQVLFGHSSPTPISESDLKAAIEWNDPTLNDSQKDAIQFAL 215
Query: 210 SSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVR 269
+S+ V ++HGPPGTGKT T++E+ILQ VK ++L C SNI+VDNIVERL PH+V +VR
Sbjct: 216 ASREVALIHGPPGTGKTHTLIELILQMVKLKLRLLVCGPSNISVDNIVERLAPHKVNMVR 275
Query: 270 LGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELR 329
LGHPARLLP VL +++ D +++ +D+R EM A + KT++ RR I EL+
Sbjct: 276 LGHPARLLPGVLSHSMEYLSRTSDAAAIVTDVRNEMDAKQASIRKTRNGRERRVIYGELK 335
Query: 330 TLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIA 389
L KE R+R+ V+D+++ + VVL+TL G+ +L + FD+VI+DEA+QALE CWI
Sbjct: 336 DLRKEYRQREGRVVSDLLRGSGVVLSTLHGSGGYQLKDQQFDVVIVDEASQALEAQCWIP 395
Query: 390 LLK--GSRCILAGDHLQLPPTVQS------------VEAEKKG-----LGRTLFERLADL 430
+L S+ ILAGDHLQLPPT++S VE +G L TLF+RL L
Sbjct: 396 VLSSGASKLILAGDHLQLPPTIKSLNSKTAKKTSTKVENATEGEDHVKLETTLFDRLLAL 455
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTL 479
+G ++ MLT QYRMH+ IM + S+ LY K+ A P V++T T +
Sbjct: 456 HGSKIKRMLTTQYRMHDLIMQYPSEALYEGKLIAAEAVKARLLHDLPYEVRKTDDTSEPV 515
Query: 480 LLIDIAGCDMEEKKDEED------------STMNEGEAEVAMAHAKRLIQSGVHASDIGI 527
+ D AG D EK ++++ S +NE EA +A H K LI++GV A DI I
Sbjct: 516 VFYDTAGGDFPEKTEDDNSGAKGKSSLLAESKVNEYEAGIAQLHVKSLIEAGVKAEDIAI 575
Query: 528 ITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR 586
ITPY Q+ LL ++L+ D+ +E+ +VDGFQGREKEA+I+S+VRSN + EVGFL+++
Sbjct: 576 ITPYNGQLALLSQMLK---DRYPGIELESVDGFQGREKEAVIVSLVRSNPEHEVGFLAEK 632
Query: 587 RRMNVAVTRARRQCCLVCDTETVS-SDGFLKRLIEYFEEHAE 627
RR+NVA+TR +R ++ D+ET+ FLK + + E+ A+
Sbjct: 633 RRLNVAMTRPKRALVVIGDSETICRGSKFLKNWMAFLEQKAD 674
>gi|342890168|gb|EGU89032.1| hypothetical protein FOXB_00444 [Fusarium oxysporum Fo5176]
Length = 1016
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 267/679 (39%), Positives = 393/679 (57%), Gaps = 65/679 (9%)
Query: 9 KQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGL 68
K+ V + F + L++ E + EI+ + T ++ + Q+ G + NL +TGL
Sbjct: 331 KREPVDIPTFATTQLALLEQELQTEINETSTLISNHSPTALQRAGLALTNLVVSGQRTGL 390
Query: 69 MGKTLLEFQ----STKGDVLPAHKFGTHDVVVLKPNKA---------DLGSPALGQGVVY 115
G+T+LE + D LP H T D+V++ A DL +GVV
Sbjct: 391 GGRTVLELSPDAATGSPDELPEHGLRTGDIVLVAEQPAGSAKKREVKDLEKKG-ARGVVT 449
Query: 116 RLKDSSITVAFDDIPEE-GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPV 174
R+ + VA D+ EE G + + KLA+EVTY+RM A+ +L+K ++ +G I V
Sbjct: 450 RVSRGWVAVAIDEGKEEVGFSGRVWAVKLADEVTYKRMNWAMEKLNK-MKESEYSGFIRV 508
Query: 175 LFGEQKPTVLKKDIA-------FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTT 227
LFG P+ + +D++ + F+ L+ SQK+AI AL S+ V ++HGPPGTGKT
Sbjct: 509 LFGLSSPSPVAEDLSKDENVGDLEWFDPTLNDSQKNAIRFALLSREVALIHGPPGTGKTH 568
Query: 228 TVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDA 287
T++E+ILQ K G +IL C SNI+VDNIVERL PH++ ++RLGHPARLLP V++ +LD
Sbjct: 569 TLIELILQMTKLGQRILVCGPSNISVDNIVERLAPHKIPILRLGHPARLLPSVVDHSLDV 628
Query: 288 QVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVI 347
+ ++ DIR EM + KTK R+ I +L+ L KE R+R++ V+ +I
Sbjct: 629 LTQTSEAGAIVKDIRTEMDTKQASIKKTKSGKERKAIYTDLKELRKEFRERERRCVSTLI 688
Query: 348 KNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPP 407
+ V+L TL GA +L N FD+VIIDEA+QALE CW+ L+ + + AGDHLQLPP
Sbjct: 689 GGSKVLLATLHGAGGYQLRNDEFDVVIIDEASQALEAQCWVPLVSAKKVVCAGDHLQLPP 748
Query: 408 TVQSVEAEKKG-------------LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSS 454
T++S A+ K L TLF+RL L+G + MLT QYRMHE IM + S
Sbjct: 749 TIKSSNAKVKAPVKDGAAVTKGTTLEITLFDRLLALHGPSIKRMLTTQYRMHESIMRFPS 808
Query: 455 KQLYNSKIKAHPS-----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEE------- 496
+LY+SK+ A + V+ T ++ ID G D EK +E+
Sbjct: 809 DELYDSKLIAADAVKHRLLKDLEYEVQDNEDTNEPVIFIDTQGGDFPEKNEEDDKDTPRK 868
Query: 497 -------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK 549
DS NE EA + H ++L+ +GV DI ++TPY AQ+ +L L+ DK
Sbjct: 869 GRAGLHGDSKSNEMEAALVQQHVRQLVGAGVRPEDIAVVTPYNAQLAILAPLK---DKFP 925
Query: 550 NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
+E+ +VDGFQGREKEA+I+S+VRSNS+ EVGFL ++RR+NVA+TR +R ++ D+ETV
Sbjct: 926 GIELGSVDGFQGREKEAVIVSLVRSNSEGEVGFLGEKRRLNVAMTRPKRSLTVIGDSETV 985
Query: 610 SSDG-FLKRLIEYFEEHAE 627
G FLK+ ++Y E++A+
Sbjct: 986 QRGGSFLKKWMQYLEDNAD 1004
>gi|403341854|gb|EJY70244.1| DNA-binding protein SMUBP-2 [Oxytricha trifallax]
Length = 1044
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 275/668 (41%), Positives = 390/668 (58%), Gaps = 60/668 (8%)
Query: 22 MAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKG 81
M L+ +E+ E+ S +L +K+ I L D TG+ GK LL K
Sbjct: 1 MEDLLSMERLTELDESANLLNKFSLKDLEKRNLAITKLSIKDVSTGIYGKILLHLTRPKK 60
Query: 82 ----------DVLPAHKFGTHDVV-VLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIP 130
D KF D+V V + ++ D +G+VYR+ I V+F ++
Sbjct: 61 KLQNQNYDDEDEGKISKFSPGDIVGVFQASQTDASDRV--EGIVYRVTQDQIVVSFKEMH 118
Query: 131 E-EGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIA 189
+ EG+ PL L LANEVT++R K+AL ++ K +I VLF Q+P V + D
Sbjct: 119 DFEGMRQPLALVILANEVTHKRCKEAL-EILKNYTQRQNQRMIEVLFEIQEPQV-QHDTE 176
Query: 190 F----KPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV-KRGSKIL 244
+ K FN L+ SQ+ AI K L+S +V M+HGPPGTGKTTTVVE+ILQ V K+ +KI+
Sbjct: 177 YLKDMKYFNQGLNESQQTAIEKCLTSTDVSMIHGPPGTGKTTTVVELILQSVEKQKAKIM 236
Query: 245 ACAASNIAVDNIVERLVPH--RVRLVRLGHPARLLPQVLESALDAQV-LRGDNSSLASDI 301
ACA SNIAVDNI+ERL ++ +VR+GHPARL+ V + LDA + R D ++I
Sbjct: 237 ACAPSNIAVDNIIERLYASNPKLNIVRIGHPARLMESVQQFCLDALISKRTDYGKQTNEI 296
Query: 302 RKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA- 360
R+ + LN KL +TK K R++I E + L K+ ++ +Q + D+ ADV+ TLT A
Sbjct: 297 RRMINKLNQKLQRTKSKTERKDIYGEYKMLKKDLKQIEQNHINDIFMRADVICCTLTSAG 356
Query: 361 -------VSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVE 413
++ + ++ FD+++IDE AQ++E ACWI + + ++AGDH QL TV+S E
Sbjct: 357 DKTLTRFINNNMQDSLFDMLVIDECAQSIEPACWIPIKFAKKLVMAGDHKQLDATVKSDE 416
Query: 414 AEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-- 471
A +KGL +LFER+ + +++++ML QYRM+E IM WS++ +Y+ +KAH R
Sbjct: 417 ASRKGLSLSLFERVMK-FKNKISTMLDEQYRMNEKIMKWSNQAMYDGNLKAHEDVKNRLM 475
Query: 472 ----TSSTE----PTLLLIDIAGCDMEEKKDEE---DSTMNEGEAEVAMAHAKRLIQSGV 520
S E LLLID AG M E DE+ +S N GE ++ + K L+ G+
Sbjct: 476 VDLYAQSQEELMLSPLLLIDTAGALMYEGIDEQSENESKYNNGECDLVIQLLKELVTMGI 535
Query: 521 HASDIGIITPYAAQVVLLKILRSKDDKL--------------KNMEVSTVDGFQGREKEA 566
SDIG+ITPY AQV +K ++L + +EVSTVDGFQGREKE
Sbjct: 536 RKSDIGVITPYNAQVNQIKKAIRGAEELHTHVEIGQIPQRGGERIEVSTVDGFQGREKEV 595
Query: 567 IIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHA 626
IIISMVRSN K E+GFLS+ RRMNVAVTRA+R C ++ D+ TVS + FLK LI+YF+E+A
Sbjct: 596 IIISMVRSNPKGEIGFLSNERRMNVAVTRAKRLCAIIADSGTVSRNNFLKDLIQYFKENA 655
Query: 627 EYLSGSEY 634
S +Y
Sbjct: 656 IQRSAFDY 663
>gi|212526278|ref|XP_002143296.1| DNA helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210072694|gb|EEA26781.1| DNA helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 713
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 279/713 (39%), Positives = 395/713 (55%), Gaps = 91/713 (12%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNL------DTAQKKGSTILNLKCVDA 64
+ V + F L+ E EAE +S + +S N T Q G + +
Sbjct: 4 TPVPISLFADAQRKLLQKEHEAEKLSSALATSSTNTVSPSTRRTLQATGYALTGIVLEQC 63
Query: 65 QTGLMGKTLLEFQSTKG-------DVLPAHKFGTH-----DVVVL----------KPNKA 102
+TG+ G+ + EF + D +FG H DVV + K K
Sbjct: 64 RTGMGGRIVGEFGADAAYATESAEDSDGRARFGAHGIRVGDVVRVLEISSGRKSGKEGKE 123
Query: 103 DLGSPALG-QGVVYRLKDSSITVAFDDI--------PEEGLNS----PLRLEKLANEVTY 149
G+ + G +GVV + + +++VAF EE ++ L L KLAN+VT+
Sbjct: 124 AGGNKSNGAEGVVIKASEKALSVAFGQTGGGANAKAEEESVDDLWGKKLWLVKLANDVTH 183
Query: 150 RRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKD-IAFKPF-NSNLDHSQKDAISK 207
RR+ + ++ K + + VLFG P+ D I F + L+ SQK+AI
Sbjct: 184 RRLNQTMEKMGK-MSESEHTYFMRVLFGHTTPSSPDYDAIGTVDFIDPTLNDSQKEAIRF 242
Query: 208 ALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRL 267
AL+SK + ++HGPPGTGKT T++E+ILQ +R +IL C SN++VDNIVERL PH+V +
Sbjct: 243 ALASKEIALIHGPPGTGKTHTLIELILQMTRRDMRILVCGPSNVSVDNIVERLTPHKVPI 302
Query: 268 VRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKE 327
VR+GHPARLLP VL+ +L+ + + + D+RKE+ + KT++ RREI +
Sbjct: 303 VRVGHPARLLPSVLDHSLEVLTQTSEAAEIVRDVRKEIDEKQASIRKTRNGRERREIYGD 362
Query: 328 LRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACW 387
L+ L KE R+R+ V +++ + VVL TL GA +L N FD+VIIDEA+QALE CW
Sbjct: 363 LKELRKEFRERESKCVENLVTGSKVVLATLHGAGGHQLKNQKFDVVIIDEASQALEAQCW 422
Query: 388 IALLKGSRCILAGDHLQLPPTVQSV-------------EAEK------KG--LGRTLFER 426
I LL SR +LAGDHLQLPPT++S EAEK KG L +T+F+R
Sbjct: 423 IPLLTASRAVLAGDHLQLPPTIKSTNIDAKKISKSKAKEAEKDSSESLKGVSLEKTMFDR 482
Query: 427 LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSST 475
L L+G + MLT QYRMHE IM + S +LY K+ A P GV+ T T
Sbjct: 483 LLALHGPSIKRMLTTQYRMHEKIMQFPSNELYEGKLIAADSVKGRLLKDLPYGVEETDDT 542
Query: 476 EPTLLLIDIAGCDMEEKKDEEDSTM----------NEGEAEVAMAHAKRLIQSGVHASDI 525
+ L+ ID G D EK ++ED+ + NE EA +A+ H + LI +GV DI
Sbjct: 543 KEPLVFIDTQGDDFPEKAEDEDTAVKGGPISESKSNEMEARIAIRHVEGLIDAGVRPEDI 602
Query: 526 GIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSD 585
++TPY AQV L I +S +K +E+ +VDGFQGREKEAI++S+VRSN K EVGFL +
Sbjct: 603 AVVTPYNAQVAL--IAQSLKEKYPGIEIGSVDGFQGREKEAIVVSLVRSNEKHEVGFLGE 660
Query: 586 RRRMNVAVTRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE--YLSGSEYL 635
+RR+NVA+TR +R C+ D+ET+S FLK + + EEHA+ Y SE
Sbjct: 661 KRRLNVAMTRPKRHLCVCGDSETISKGSKFLKNWMSFLEEHADLRYPDASELF 713
>gi|432091028|gb|ELK24240.1| DNA-binding protein SMUBP-2 [Myotis davidii]
Length = 948
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 256/601 (42%), Positives = 347/601 (57%), Gaps = 76/601 (12%)
Query: 45 NLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNK 101
+L Q++G +L L+ +TGL G+ L+ F+ + VLP++ F + DVV L
Sbjct: 275 SLKELQRRGVCLLKLQVSSQRTGLYGQLLVTFEPPRCASAGVLPSNSFSSGDVVGLNDEG 334
Query: 102 ADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLN----SPLRLEKLANEVTYRRMKDALI 157
L + GV+ R+ S+TVAFD + L+ + RL KLAN+VTY+R+K ALI
Sbjct: 335 GQLAT-----GVLTRITQKSVTVAFDQSCDSQLSFDQQNSYRLLKLANDVTYKRLKKALI 389
Query: 158 QLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFML 217
L K GPA LI VLFG+ P+ A +N+ LD SQ++A+S AL+ K + ++
Sbjct: 390 ALKK-YHTGPAFSLIEVLFGDAAPSPAGDTRAPTFYNAALDASQQEAVSFALAQKELAII 448
Query: 218 HGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLL 277
HGPPGTGKTTTVVE ILQ VK+G K+L CA SNIAVDN+V HPARLL
Sbjct: 449 HGPPGTGKTTTVVEFILQAVKQGCKVLCCAPSNIAVDNLVXXXX------XXXXHPARLL 502
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERK 337
V + +LDA + R D + + +DIR+++ ++
Sbjct: 503 EAVQQHSLDAVLARSDGAQIVADIRRDIDQVS---------------------------- 534
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCI 397
V + D L + L + FD+V+IDE AQALE +CW+ LLK +C+
Sbjct: 535 --------VRASPDGPL--------KLLPDGYFDVVVIDECAQALEASCWVPLLKARKCV 578
Query: 398 LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQL 457
LAGDH QLPPT+ S +A GL +L ERLA LTVQYRMH IM W+S+ L
Sbjct: 579 LAGDHKQLPPTIVSPKAALAGLSLSLMERLAQGCCAGAVRTLTVQYRMHRAIMQWASEAL 638
Query: 458 YNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEED-STMNEGEAE 506
Y ++ AHPS GV T T LLL+D AGC + E ++EED S N GE
Sbjct: 639 YRGQLTAHPSVAEHLLRDLPGVAATEETGLPLLLVDTAGCGLSELEEEEDQSKGNPGEVR 698
Query: 507 VAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEA 566
+ H + L+ +GV ASDI +ITPY QV LL+ +S + +E+ +VDGFQGREKEA
Sbjct: 699 LVSLHVQALVDAGVPASDIAVITPYNLQVDLLR--QSLAHRHPELEIKSVDGFQGREKEA 756
Query: 567 IIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHA 626
+++S VRSN + EVGFL++ RR+NVA+TRARR +VCD+ TVSS FLK L++YF EH
Sbjct: 757 VVLSFVRSNRRGEVGFLAEDRRINVAITRARRHVAIVCDSRTVSSHAFLKTLVDYFAEHG 816
Query: 627 E 627
E
Sbjct: 817 E 817
>gi|440797031|gb|ELR18126.1| putative DNA helicase [Acanthamoeba castellanii str. Neff]
Length = 1108
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 285/736 (38%), Positives = 397/736 (53%), Gaps = 114/736 (15%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
+ +FV L++ E++AEI + + Q+ G +L L V +TG+ G L+
Sbjct: 9 VSKFVEKQLELLNDERDAEIEQTRALQEGYSPKELQRYGECVLRLHVVGRKTGVGGLLLV 68
Query: 75 EFQSTKGDV---LPAHKFGTHDVVVLKPNKADLGSPALGQ------GVVYRLKDSSITVA 125
+ LP+H+F D+V L P+ + S + GV+YR + SITV+
Sbjct: 69 KLARAATAATTPLPSHRFQPGDIVGLVPSNVPISSFMVESMQKGKGGVIYRAAEHSITVS 128
Query: 126 FDDIPEEGL------NSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAG-----LIPV 174
F + EEGL N+ L +LAN+VTY+R + AL L + V + A G L V
Sbjct: 129 FSKMDEEGLALDTDGNTTYTLIRLANDVTYKRYRKALEALRQQVTSRTAGGGDNDHLKQV 188
Query: 175 LFGEQKPTV---LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHG-----PPG---- 222
LFG +P + PFN NL+ SQK+AI+ AL + + + PG
Sbjct: 189 LFGLGEPRFVGHFRNRFELTPFNPNLNDSQKEAITFALGTIDFHPVSSRVPGTDPGLVNC 248
Query: 223 --TGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR----VRLVRLGHPARL 276
TGKTTTVVE ILQ VKRG ++LA A SNIAVDNI ERL + ++VR+GHPARL
Sbjct: 249 GATGKTTTVVEFILQCVKRGERVLATAPSNIAVDNIAERLAVYAKQSGAKIVRVGHPARL 308
Query: 277 LPQVLESALDAQVLRGDNSS-LASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEE 335
LP V+ +LDA+V + + + LA D+RKEM L L K RR + +LR L KE
Sbjct: 309 LPSVVGLSLDARVKQHSHQTELADDVRKEMAKLQSSLGKA-TPGERRGVYAQLRQLRKEL 367
Query: 336 RKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS-FDLVIIDEAAQALEIACWIALLKGS 394
+R+ AV +++ A+++L T TGA +KL FD+ +IDEAAQA+E +CWI +LK
Sbjct: 368 WEREGKAVDEILSQANIILATNTGAADKKLQKLPMFDVAVIDEAAQAVEASCWIPILKAK 427
Query: 395 RCILAGDHLQLPPTVQSVEAEKKGLGRTLFE-----------------RLADLYGDEVTS 437
+ ILAGDH QLPPT+ S A K GL TLF+ R+ +YGD V
Sbjct: 428 KLILAGDHCQLPPTIISEGAAKAGLSHTLFDRAWPCSVSFTTSSTVTFRMVKMYGDTVRH 487
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLIDIAG 486
ML +QYRMH+ I WSSK+ Y +++AH P T+ T+ L+++D G
Sbjct: 488 MLLIQYRMHDKINQWSSKEFYEGRLQAHASVASHLLRDLPHVQSDTTETKSPLIIVDTTG 547
Query: 487 C----DMEEKKDEEDSTMNEGEAEVA-------------------MAHAKRLIQSGVHAS 523
C +M E K+ D N+ A+ A A + +H S
Sbjct: 548 CGFHEEMVEIKNAADRGQNKKGADAAEETKGKRKPMMLGEGSKANQARPTWCTTTSIHCS 607
Query: 524 -------------DIGIITPYAAQVVLLK-ILRSK------DDKLKNMEVSTVDGFQGRE 563
DIGII+PY AQV L+ LR + +++ +EVSTVDGFQGRE
Sbjct: 608 NKVPPCLAGLRPEDIGIISPYNAQVDRLRHALRERGIPGMEKREMEKIEVSTVDGFQGRE 667
Query: 564 KEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV--SSDGFLKRLIEY 621
KE IIIS VRSN K E+GFL++ RRMNVA+TRA+R +VCD ET+ + + FLKR+IEY
Sbjct: 668 KEVIIISFVRSNQKGEIGFLAESRRMNVAITRAKRSVVVVCDEETINHAKNEFLKRMIEY 727
Query: 622 FEEHAEYLSGSEYLNE 637
FE EY++G+++ E
Sbjct: 728 FEAEGEYVAGAQFAGE 743
>gi|156061925|ref|XP_001596885.1| hypothetical protein SS1G_03108 [Sclerotinia sclerotiorum 1980]
gi|154700509|gb|EDO00248.1| hypothetical protein SS1G_03108 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 702
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 263/691 (38%), Positives = 391/691 (56%), Gaps = 83/691 (12%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
V + F + L+D E ++E+S + T + + + G I+NL + +TGL GKT
Sbjct: 8 VDIPSFCATQLHLLDQELQSELSETSTFLTGTSPTSLHRAGLAIINLVLISQRTGLGGKT 67
Query: 73 LLEF------------------QSTKGDVLPAHKFGTHDVVVL--KPNKA---------- 102
++E + L H D+V + +P+ +
Sbjct: 68 VVELGPDPATSSSGSVGKGKGGGGSGEGELQEHGIRVGDIVAVSEQPSGSAKKREVKELE 127
Query: 103 DLGSPALGQGVVYRLKDSSITVAFDD--IPEEGLNSPLR--LEKLANEVTYRRMKDALIQ 158
+ GS +GVV ++ S++ VA D+ EE + R + KLAN+VTY+RM + +
Sbjct: 128 EKGS----KGVVTKVGRSAVWVALDENGKGEENVGGMKRCWVVKLANDVTYKRMNGTMGK 183
Query: 159 LSKGVQNGPAAGLIPVLFGEQKPTVLKKDIA---FKPFNSNLDHSQKDAISKALSSKNVF 215
L K +Q + + VLFG + + +++ + + +L+ SQK AI AL+SK +
Sbjct: 184 LGK-MQEAEYSNFVRVLFGWSSASPVPENLMGEEIEWVDLSLNDSQKHAIRFALASKEIA 242
Query: 216 MLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPAR 275
++HGPPGTGKT T++E+ILQ +K+G ++L C SNI+VDNIVERL PH+V ++RLGHPAR
Sbjct: 243 LIHGPPGTGKTHTLIELILQMLKQGLRVLVCGPSNISVDNIVERLAPHKVPILRLGHPAR 302
Query: 276 LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEE 335
LLP V+ +LD + +++ D+RKEM + KTK R+ I +L+ L KE
Sbjct: 303 LLPSVVNHSLDVLTQTSEAAAIVQDVRKEMDTKQASIKKTKSGRERKAIYGDLKELRKEF 362
Query: 336 RKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR 395
R+R++ V ++K + VVL TL GA +L + +FD+VIIDEA+QALE CW+ LL +
Sbjct: 363 RERERKCVNTLVKGSKVVLATLHGAGGYQLRDENFDVVIIDEASQALEAQCWVPLLSAGK 422
Query: 396 CILAGDHLQLPPTVQSVEAEKK---------------GLGRTLFERLADLYGDEVTSMLT 440
+LAGDHLQLPPT++S+ ++ K L TLF+RL L+G + MLT
Sbjct: 423 VVLAGDHLQLPPTIKSLNSKTKTNPQSTETESIIKGMTLETTLFDRLLKLHGIRIKVMLT 482
Query: 441 VQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLIDIAGCDM 489
QYRMH+ IM + S +LY SK+ A P V+ T T L+ D G D
Sbjct: 483 TQYRMHDKIMRFPSDELYESKLVAAEAVKARLLTELPYDVEETEDTIEPLIFFDTQGGDF 542
Query: 490 EEKKDEE------------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVL 537
EK +EE +S NE EA + H + L+ +G+ DI ++TPY AQ+ L
Sbjct: 543 PEKSEEEGVDKKAGKGMLGESKSNEMEAALVRRHVQNLVDAGLKPEDIAVVTPYNAQLAL 602
Query: 538 LKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
+ RS +E+ +VDGFQGREKEAII+S+VRSNS+ EVGFL ++RR+NVA+TR R
Sbjct: 603 MA--RSMKQVFPGIELGSVDGFQGREKEAIIVSLVRSNSEYEVGFLGEKRRLNVAMTRPR 660
Query: 598 RQCCLVCDTETVS-SDGFLKRLIEYFEEHAE 627
R ++ D+ETVS FLKR +++ EEHA+
Sbjct: 661 RSLTVIGDSETVSRGSKFLKRWMDFLEEHAD 691
>gi|358391418|gb|EHK40822.1| hypothetical protein TRIATDRAFT_226900 [Trichoderma atroviride IMI
206040]
Length = 687
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 265/681 (38%), Positives = 394/681 (57%), Gaps = 73/681 (10%)
Query: 12 AVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGK 71
+V + F + L+D E ++EI + T + + Q+ G I NL +TGL GK
Sbjct: 3 SVFVPSFAATQLALLDEELQSEIQETSTLITNHSPTGLQRAGLAITNLNISSQRTGLGGK 62
Query: 72 TLLEFQ-----STKGDVLPAHKFGTHDVVVLKPNKADLGSPAL----------GQGVVYR 116
T+LE S+ G+ LP H T D+V++ A GS +GVV R
Sbjct: 63 TVLELSPDSATSSTGE-LPEHGIRTGDIVLVAEQPA--GSAKKREIKELEKKGARGVVTR 119
Query: 117 LKDSSITVAFDDIPEEGLNSP-LRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVL 175
++ +++ VA D+ ++ + S + + KLA+EVTYRRM + +L K + + I VL
Sbjct: 120 VQRAAVNVALDEGKDDVMFSGRVWMVKLADEVTYRRMNQTMEKLQK-MGEAEYSSFIRVL 178
Query: 176 FGEQKPTVLKKDIA-------FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTT 228
FG P+ + ++++ + + L+ SQKDAI AL+S+ V ++HGPPGTGKT T
Sbjct: 179 FGLSSPSPVPQNLSTSDEVGSIEWIDPTLNDSQKDAIRFALASREVALIHGPPGTGKTHT 238
Query: 229 VVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQ 288
++E+ILQ +KR +IL C SNI+VDNIVERL PH++ ++RLGHPARLLP VL +LD
Sbjct: 239 LIELILQMIKRNQRILVCGPSNISVDNIVERLSPHKIPILRLGHPARLLPSVLNHSLDVL 298
Query: 289 VLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIK 348
+ ++ D+R EM A + KTK R+ I +L+ L KE R+R++ V++++
Sbjct: 299 TQTSEAGAIVKDVRAEMDAKQASIKKTKSGKERKAIYTDLKELRKEYRERERRCVSNLVG 358
Query: 349 NADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPT 408
+ VVL TL GA +L N FD+VIIDEA+QALE CW+ LL + + AGDHLQLPPT
Sbjct: 359 GSKVVLATLHGAGGFQLRNEQFDVVIIDEASQALEAQCWVPLLSAKKAVCAGDHLQLPPT 418
Query: 409 VQSVEAEKKGLG-----------------RTLFERLADLYGDEVTSMLTVQYRMHEHIMN 451
++S+ ++ K L TLF+RL L+G + MLT QYRMHE IM
Sbjct: 419 IKSLNSKVKALKVKEGDDGTPVIRGMTLETTLFDRLLALHGPSIKRMLTTQYRMHEKIMR 478
Query: 452 WSSKQLYNSKIKAHPSGVKR------------TSSTEPTLLLIDIAGCDMEEKKDEED-- 497
+ S +LY S++ A + R +TEP L+ ID G D E+ +++D
Sbjct: 479 FPSDELYGSELIAADAVKARLLKDLEYDVQGNEDTTEP-LIFIDTQGGDFPERNEDDDKD 537
Query: 498 ----------STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDK 547
S N+ EA + H K+L+++GV DI ++TPY AQ+ L L+ +K
Sbjct: 538 GPKRGNLHGESKSNDMEAALVRLHVKQLVEAGVRPEDIAVVTPYNAQLAALATLK---EK 594
Query: 548 LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTE 607
+E+ +VDGFQGREKEA+I+S+VRSN EVGFL ++RR+NVA+TR +R ++ D+E
Sbjct: 595 FPGIELGSVDGFQGREKEAVIVSLVRSNPDGEVGFLGEKRRLNVAMTRPKRSLTVIGDSE 654
Query: 608 TVS-SDGFLKRLIEYFEEHAE 627
TV FLK+ +E+ EE+A+
Sbjct: 655 TVKRGSKFLKKWMEFLEENAD 675
>gi|358377729|gb|EHK15412.1| hypothetical protein TRIVIDRAFT_184819 [Trichoderma virens Gv29-8]
Length = 690
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 266/680 (39%), Positives = 395/680 (58%), Gaps = 73/680 (10%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
+ + F S L+D E ++EI + + ++ + Q+ G I NL +TGL GKT
Sbjct: 7 IDVPSFASTQLALLDQELQSEIQETSSLVSNHSPTGLQRAGLAITNLTISSQRTGLGGKT 66
Query: 73 LLEFQ-----STKGDVLPAHKFGTHDVVVLKPNKADLGSPAL----------GQGVVYRL 117
+LE S+ G+ LP H T D+V++ A GS +GVV ++
Sbjct: 67 VLELSPNSATSSTGE-LPEHGIRTGDIVLVAEQPA--GSAKKREVKELERKGARGVVTKV 123
Query: 118 KDSSITVAFDDIPEEGLNSP-LRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLF 176
+ +++ VA D+ +E + + + + KLA+EVTYRRM + +L K + + I VLF
Sbjct: 124 QRAAVNVALDEGKDEVVFAGRVWMVKLADEVTYRRMNQTMEKLQK-MGEAEYSSFIRVLF 182
Query: 177 GEQKPTVLKKDIA-------FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTV 229
G P+ + +D+ + + L+ SQKDAI AL+S+ V ++HGPPGTGKT T+
Sbjct: 183 GLSSPSPVPQDLTASDEVGNIEWIDLTLNDSQKDAIRFALASREVALIHGPPGTGKTHTL 242
Query: 230 VEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQV 289
+E+ILQ +KR +IL C SNI+VDNIVERL PH++ ++RLGHPARLLP VL +LD
Sbjct: 243 IELILQMIKRDQRILVCGPSNISVDNIVERLSPHKIPILRLGHPARLLPSVLNHSLDVLT 302
Query: 290 LRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKN 349
+ ++ D+R EM A + KTK R+ I +L+ L KE R+R++ V++++
Sbjct: 303 QTSEAGAIVKDVRAEMDAKQASIKKTKSGKERKAIYTDLKELRKEYRERERRCVSNLVGG 362
Query: 350 ADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTV 409
+ VVL TL GA +L N FD+VIIDEA+QALE CW+ LL + + AGDHLQLPPT+
Sbjct: 363 SKVVLATLHGAGGFQLRNEQFDVVIIDEASQALEAQCWVPLLSAKKAVCAGDHLQLPPTI 422
Query: 410 QS----VEAEKKG-------------LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNW 452
+S V+ + KG L TLF+RL L+G + MLT QYRMHE IM +
Sbjct: 423 KSLNSKVKVKSKGGDENAAPVIRGMTLETTLFDRLLALHGPSIKRMLTTQYRMHEKIMRF 482
Query: 453 SSKQLYNSKIKAHPSGVKR------------TSSTEPTLLLIDIAGCDMEEKKDEED--- 497
S +LY+S++ A + R +TEP ++ ID G D E+ +++D
Sbjct: 483 PSDELYDSELIAADAVKARLLKDLEYDVENNEDTTEP-VIFIDTQGGDFPERNEDDDKEN 541
Query: 498 ---------STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKL 548
S NE EA + H K+L+++GV DI ++TPY AQ+ L L+ +K
Sbjct: 542 PKKGSLHGESKSNEMEAALVRLHVKQLVEAGVRPEDIAVVTPYNAQLAALASLK---EKF 598
Query: 549 KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTET 608
+E+ +VDGFQGREKEA+I+S+VRSN EVGFL ++RR+NVA+TR +R ++ D+ET
Sbjct: 599 PGIELGSVDGFQGREKEAVIVSLVRSNPDGEVGFLGEKRRLNVAMTRPKRSLTVIGDSET 658
Query: 609 VS-SDGFLKRLIEYFEEHAE 627
V FLK+ +E+ EE+A+
Sbjct: 659 VKRGSKFLKKWMEFLEENAD 678
>gi|392864335|gb|EAS34834.2| DNA helicase [Coccidioides immitis RS]
Length = 738
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 266/703 (37%), Positives = 389/703 (55%), Gaps = 107/703 (15%)
Query: 35 SASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF------QSTKG------- 81
S S S A+R Q G + L V+ +TG+ G+ + EF +S KG
Sbjct: 40 SLSFVSPATRR--ALQAAGHALTALVLVNCRTGMGGREVGEFGVDAALKSAKGKKTGEGA 97
Query: 82 ----------DVLPAHKFGTHDVVVLKP------------------NKADLGSPALGQGV 113
+ LPAH DVV ++P K D +GV
Sbjct: 98 LPTGNGDGARESLPAHGIRVGDVVRVEPIVSGARGGSGSKAGKGKVGKDDADVTKGLEGV 157
Query: 114 VYRLKDSSITVAFDDIPEEG----------LNSPLRLEKLANEVTYRRMKDALIQLSKGV 163
V ++ + S+ VAFD+ G L L KLAN++TYRRMK ++++ K
Sbjct: 158 VTKIGERSVWVAFDERGRPGKQDDDGAAGLWGQKLWLVKLANDITYRRMKQTMVRMEKMA 217
Query: 164 QNGPAAGLIPVLFGEQKPTVLKKDIA--FKPFNSNLDHSQKDAISKALSSKNVFMLHGPP 221
++ + + VLFG P+ A + +L+ SQK+AI AL+S+ + ++HGPP
Sbjct: 218 ES-EHSSFMRVLFGHTTPSPPDWSSASSLDFIDPSLNDSQKEAIRFALASREIALIHGPP 276
Query: 222 GTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVL 281
GTGKT T++E+ILQ ++R +IL C SNI+VDNIVERL PH++ LVR+GHPARLL V+
Sbjct: 277 GTGKTHTLIELILQLLRRNLRILVCGPSNISVDNIVERLAPHKIPLVRIGHPARLLSSVV 336
Query: 282 ESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQL 341
+ +L+A D +++ D+R+E+ + KT+ RREI K+L+ L KE R+R+
Sbjct: 337 DHSLEALTQTSDAAAIVKDVRREIDEKQASIRKTRSGRERREIYKDLKELRKEFREREAR 396
Query: 342 AVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGD 401
V ++ + VVL TL GA +L N FD+V+IDEA+QALE CW+ LL S+ ILAGD
Sbjct: 397 CVDHLVTESKVVLATLHGAGGHQLKNQKFDVVLIDEASQALEAQCWVPLLSASKAILAGD 456
Query: 402 HLQLPPTVQSV---------------EAEKKG-------------LGRTLFERLADLYGD 433
HLQLPPT++S A + G L TLF+RL L+G
Sbjct: 457 HLQLPPTIKSTTTNTPSGSSRKLKSSNAIQSGADDLTISSLSITSLETTLFDRLLSLHGP 516
Query: 434 EVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLI 482
+ MLT QYRMHE IM++ S +LY SK+ A P ++ T T L+
Sbjct: 517 TIKRMLTTQYRMHEKIMSFPSCELYESKLIAADHVKARLLKDLPCDIQDTDDTCEPLVFY 576
Query: 483 DIAGCDMEEKKDE-----EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVL 537
D G + E+ ++ DS N+ EA V H + LI +G+ DI +ITPY AQV L
Sbjct: 577 DTQGGEFPERIEDGELLLADSKSNDLEAAVVARHVQNLIAAGLREEDIAVITPYNAQVAL 636
Query: 538 L-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
L ++LR ++ +E+ +VDGFQGREKEA+++S+VRSN+++EVGFL ++RR+NVA+TR
Sbjct: 637 LAQLLR---ERHPGLEIGSVDGFQGREKEAVVVSLVRSNAEREVGFLGEKRRLNVAMTRP 693
Query: 597 RRQCCLVCDTETVS-SDGFLKRLIEYFEEHAE--YLSGSEYLN 636
R+ C+ D+ET+S FLKR ++Y EE+++ Y +EY+
Sbjct: 694 RKHLCVCGDSETISRGSPFLKRWMDYLEENSDLRYPDAAEYMQ 736
>gi|340905007|gb|EGS17375.1| DNA polymerase alpha-associated DNA helicase-like protein
[Chaetomium thermophilum var. thermophilum DSM 1495]
Length = 890
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 267/685 (38%), Positives = 385/685 (56%), Gaps = 92/685 (13%)
Query: 25 LIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQ-----ST 79
L +++ E E S+++ S S + Q+ G + NL + +TGL GKT+LE +
Sbjct: 205 LAEVQAEIEESSALVSLHSPS--ALQRAGVALTNLTILSQRTGLGGKTVLELGPDPAFTI 262
Query: 80 KGDVLPAHKFGTHDVVVLKPNKADLGSPALG-----------------------QGVVYR 116
LP H D+V++ A G +GVV +
Sbjct: 263 STSELPEHAIRVGDIVLVSELHAQSGIKTTKRGKTKGLAGGDGGSGGGEKQTGVKGVVTK 322
Query: 117 LKDSSITVAFDD---------IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGP 167
+ ++ VA ++ IPE + K+A++VTYRRM + +L+K +
Sbjct: 323 VGKGTVCVAVEEEDAERGEERIPE----GRCWIVKVADDVTYRRMSQTMDKLAK-MSEAE 377
Query: 168 AAGLIPVLFGEQKPTVLKKDIAFKP-------FNSNLDHSQKDAISKALSSKNVFMLHGP 220
I VLFG P+ + +D++ P F+ L+ SQKDAI AL+SK + ++HGP
Sbjct: 378 YTPFIRVLFGLSSPSPVPEDLSKDPEVGNIEWFDKTLNDSQKDAIRFALASKEIALIHGP 437
Query: 221 PGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQV 280
PGTGKT T++E+ILQ + R +IL C SNI+VDNIVERL PH++ L+RLGHPARLLP +
Sbjct: 438 PGTGKTHTLIELILQLLSRNLRILVCGPSNISVDNIVERLAPHQIPLIRLGHPARLLPSI 497
Query: 281 LESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQ 340
L +LD D S++ DIR EM L + KT+ RR I +L+ L KE R+R++
Sbjct: 498 LPYSLDILTRTSDASAIVQDIRSEMDTLQSSIRKTRSGRERRAIYAQLKDLRKEYRERER 557
Query: 341 LAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAG 400
V ++IK + VVL TL GA +L FD+VIIDEA+QALE CW+ALL + + AG
Sbjct: 558 RCVDELIKGSKVVLATLHGAGGFQLRQEQFDVVIIDEASQALEAQCWVALLAAKKAVCAG 617
Query: 401 DHLQLPPTVQSVEAE-----KKG---LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNW 452
DHLQLPPT++S+ + KKG L TLF+RL L+G + MLT QYRMHE IM +
Sbjct: 618 DHLQLPPTIKSLNSSKGASAKKGGPSLETTLFDRLLALHGSGIKRMLTTQYRMHEKIMRF 677
Query: 453 SSKQLYNSKIKAHPS-----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEE----- 496
S +LY+ K+ A P GV+ T T L+ ID G D EK +++
Sbjct: 678 PSDELYDGKLVAAPRVGDRLLKDLPYGVEETDETTEPLIFIDTQGGDFPEKNEDDSDQQD 737
Query: 497 -------------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRS 543
+S NE EA + H ++L+++GV A DI ++TPY AQ+ +L L+
Sbjct: 738 GSKKKLTKGMIYSESKSNEMEAALVRQHVRKLVEAGVKAEDIAVVTPYNAQLAILAPLK- 796
Query: 544 KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLV 603
D+ +E+ +VDGFQGREKEA+I+S+VRSN EVGFL ++RR+NVA+TR +R ++
Sbjct: 797 --DEFPGIELGSVDGFQGREKEAVIVSLVRSNPDGEVGFLGEKRRLNVAMTRPKRSLTVI 854
Query: 604 CDTETVSSDG-FLKRLIEYFEEHAE 627
D+ETV FLK +E+ EE+A+
Sbjct: 855 GDSETVKKGSKFLKNWMEFLEENAD 879
>gi|347827230|emb|CCD42927.1| similar to DNA helicase [Botryotinia fuckeliana]
Length = 703
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 265/693 (38%), Positives = 392/693 (56%), Gaps = 84/693 (12%)
Query: 12 AVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGK 71
+V + F + L+D E ++E+S + T + + Q+ G I NL + +TGL GK
Sbjct: 7 SVDIPSFCTTQLHLLDQELQSELSETSTLITGTSPTSLQRAGLAITNLILISQRTGLGGK 66
Query: 72 TLLEF-------------------QSTKGDVLPAHKFGTHDVVVL--KPNKA-------- 102
++E + L H D+V + +P+ +
Sbjct: 67 AVVELGPDPATSSSGSGGKGKGGSGGSGEGELQEHGIRVGDIVAVSEQPSGSAKKREVKE 126
Query: 103 --DLGSPALGQGVVYRLKDSSITVAFDD--IPEEGLNSPLR--LEKLANEVTYRRMKDAL 156
+ GS +GVV ++ S++ VA D+ EE + R + KLAN+VTY+RM +
Sbjct: 127 LEEKGS----RGVVTKVGRSAVWVALDENGKGEEIVGGMKRCWVVKLANDVTYKRMNGTM 182
Query: 157 IQLSKGVQNGPAAGLIPVLFGEQKPTVLKKD---IAFKPFNSNLDHSQKDAISKALSSKN 213
+L K +Q + + VLFG P+ + ++ + + + +L+ SQK AI AL+S
Sbjct: 183 GKLGK-MQEAEYSNFVRVLFGLSSPSPVPENLENVDIEWLDPSLNDSQKHAIKFALASTE 241
Query: 214 VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHP 273
+ ++HGPPGTGKT T++E+ILQ +KR ++L C SNI+VDNIVERL PH+V +VRLGHP
Sbjct: 242 MALIHGPPGTGKTHTLIELILQMLKRNLRVLVCGPSNISVDNIVERLAPHKVPIVRLGHP 301
Query: 274 ARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSK 333
ARLLP V+ +LD + +++ D+RKEM + KTK R+ I +L+ L K
Sbjct: 302 ARLLPSVVNHSLDVLTQTSEAAAIVQDVRKEMDTKQASIKKTKSGKERKAIYGDLKELRK 361
Query: 334 EERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKG 393
E R+R++ V ++ + VVL TL GA +L + FD+VIIDEA+QALE CW+ LL
Sbjct: 362 EFRERERKCVNTLVGGSKVVLATLHGAGGFQLRDEKFDVVIIDEASQALEAQCWVPLLSA 421
Query: 394 SRCILAGDHLQLPPTVQSV---------EAEKKG------LGRTLFERLADLYGDEVTSM 438
S+ +LAGDHLQLPPT++S+ + E +G L TLF+RL L+G + M
Sbjct: 422 SKVVLAGDHLQLPPTIKSLNFKTKTKSQDTETEGIIKGMTLETTLFDRLLKLHGAGIKVM 481
Query: 439 LTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLIDIAGC 487
LT QYRMHE IM + S +LY SK+ A P V+ T T L+ D G
Sbjct: 482 LTTQYRMHEKIMRFPSDELYESKLVAAEAVKARLLTELPYDVEETEDTIEPLIFFDTQGD 541
Query: 488 DMEEKKDEE------------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQV 535
D EK +EE +S NE EA + H + L+ +G+ DI ++TPY AQ+
Sbjct: 542 DFPEKSEEENVDKKAGKGMLGESKSNEMEAVLVRRHVQNLVDAGLKPEDIAVVTPYNAQL 601
Query: 536 VLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
L+ RS + +E+ +VDGFQGREKEAII+S+VRSNS++EVGFL ++RR+NVA+TR
Sbjct: 602 ALMS--RSMKEAFPGIELGSVDGFQGREKEAIIVSLVRSNSEREVGFLGEKRRLNVAMTR 659
Query: 596 ARRQCCLVCDTETVS-SDGFLKRLIEYFEEHAE 627
RR ++ D+ETVS FLKR +++ EE+A+
Sbjct: 660 PRRSLTIIGDSETVSRGSKFLKRWMDFLEENAD 692
>gi|258573219|ref|XP_002540791.1| DNA helicase [Uncinocarpus reesii 1704]
gi|237901057|gb|EEP75458.1| DNA helicase [Uncinocarpus reesii 1704]
Length = 725
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 271/696 (38%), Positives = 386/696 (55%), Gaps = 110/696 (15%)
Query: 37 SITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF------QSTKG--------- 81
S S A+R Q G + L V+ +TG+ G+ + EF +S KG
Sbjct: 42 SFVSPATRR--ALQAAGHALTGLVLVNCRTGMGGREVGEFGVDSALKSAKGKKVGDMGDN 99
Query: 82 -----DVLPAHKFGTHDVVVLKP----NKADLGSPA----LG----------QGVVYRLK 118
D LPAH DVV ++P + +GS A +G +GVV R+
Sbjct: 100 GDAGRDSLPAHGIRVGDVVRVEPIASGARGGVGSKAGKAKVGKDDDKTTKGLEGVVTRVG 159
Query: 119 DSSITVAFDD------IPEEGLNS----PLRLEKLANEVTYRRMKDALIQLSKGVQNGPA 168
+ S+ +AFDD +EG +S L L KLAN++T+RRM+ +
Sbjct: 160 ERSVWIAFDDRGRPGKQDDEGADSLWGQKLWLVKLANDITHRRMEK--------MTESDH 211
Query: 169 AGLIPVLFGEQKPT----VLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTG 224
+ VLFG P+ I F + +L+ SQK AI AL+S + ++HGPPGTG
Sbjct: 212 TRFMQVLFGHTTPSSPDWASGSSIDF--IDPSLNDSQKAAIRFALASHEIALIHGPPGTG 269
Query: 225 KTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESA 284
KT T++E+ILQ V+R +IL C SNI+VDNIVERL PH++ LVR+GHPARLL VL+ +
Sbjct: 270 KTHTLIELILQLVRRNLRILVCGPSNISVDNIVERLAPHKIPLVRIGHPARLLSSVLDHS 329
Query: 285 LDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVT 344
L+ D++++ D+R+E++ + KT+ RREI K+L+ L KE R+R+ V
Sbjct: 330 LEVLTQTSDSAAIVKDVRREIEQKQASIRKTRSGRERREIYKDLKELRKEFREREARCVD 389
Query: 345 DVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQ 404
++ + VVL TL G+ +L N FD+V+IDEA+QALE CW+ LL S+ ILAGDHLQ
Sbjct: 390 SLVTGSKVVLATLHGSGGHQLRNQKFDVVLIDEASQALEAQCWVPLLSASKAILAGDHLQ 449
Query: 405 LPPTVQSV-------EAEKKG------------------LGRTLFERLADLYGDEVTSML 439
LPPT++SV A+ K L TLF+RL L+G ++ ML
Sbjct: 450 LPPTIKSVTTKISSSAAKPKSFEEDHHADLSMSKLSIETLETTLFDRLLSLHGADIKRML 509
Query: 440 TVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLIDIAGCD 488
T QYRMHE IM++ S +LY S++ A P V+ T T L+ D G +
Sbjct: 510 TTQYRMHEKIMSFPSSELYESRLIAADHVKARLLRDLPYEVQDTDDTREPLVFYDTQGDE 569
Query: 489 MEEKKDE-----EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRS 543
E+ +E DS N+ E + H LI +GV DI +ITPY AQV LL L
Sbjct: 570 FPERTEEAELLLADSKSNDLEGAIVARHVGNLIAAGVVEEDIAVITPYNAQVALLAQLLK 629
Query: 544 KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLV 603
+K +E+ +VDGFQGREKEA+++S+VRSN ++EVGFL ++RR+NVA+TR RR C+
Sbjct: 630 --EKYPGLEIGSVDGFQGREKEAVVVSLVRSNPEREVGFLGEKRRLNVAMTRPRRHLCVC 687
Query: 604 CDTETVS-SDGFLKRLIEYFEEHAE--YLSGSEYLN 636
D+ET+S FLKR +E+ EE+A+ Y +E++
Sbjct: 688 GDSETISRGSPFLKRWMEFLEENADLRYPDATEFMQ 723
>gi|303313437|ref|XP_003066730.1| hypothetical protein CPC735_059550 [Coccidioides posadasii C735
delta SOWgp]
gi|240106392|gb|EER24585.1| hypothetical protein CPC735_059550 [Coccidioides posadasii C735
delta SOWgp]
Length = 738
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 266/703 (37%), Positives = 388/703 (55%), Gaps = 107/703 (15%)
Query: 35 SASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF------QSTKG------- 81
S S S A+R Q G + L V+ +TG+ G+ + EF +S KG
Sbjct: 40 SLSFVSPATRR--ALQAAGHALTALVLVNCRTGMGGREVGEFGVDAALKSAKGKKTGEGA 97
Query: 82 ----------DVLPAHKFGTHDVVVLKP------------------NKADLGSPALGQGV 113
+ LPAH DVV ++P K D +GV
Sbjct: 98 LPTANGDGARESLPAHGIRVGDVVRVEPVVSGARGGSGSKAGKGKVGKDDEDVTKGLEGV 157
Query: 114 VYRLKDSSITVAFDDIPEEG----------LNSPLRLEKLANEVTYRRMKDALIQLSKGV 163
V ++ + S+ VAFD+ G L L KLAN++TYRRMK ++++ K
Sbjct: 158 VTKIGERSVWVAFDERGRPGKQDDEGAAGLWGQKLWLVKLANDITYRRMKQTMVRMEKMA 217
Query: 164 QNGPAAGLIPVLFGEQKPTVLKKDIA--FKPFNSNLDHSQKDAISKALSSKNVFMLHGPP 221
++ + + VLFG P+ A + +L+ SQK+AI AL+S+ + ++HGPP
Sbjct: 218 ES-EHSSFMRVLFGHTTPSPPDWSSASSLDFIDPSLNDSQKEAIRFALASREIALIHGPP 276
Query: 222 GTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVL 281
GTGKT T++E+ILQ ++R +IL C SNI+VDNIVERL PH++ LVR+GHPARLL V+
Sbjct: 277 GTGKTHTLIELILQLLRRNLRILVCGPSNISVDNIVERLAPHKIPLVRIGHPARLLSSVV 336
Query: 282 ESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQL 341
+ +L+A D +++ D+R+E+ + KT+ RREI K+L+ L KE R+R+
Sbjct: 337 DHSLEALTQTSDAAAIVKDVRREIDEKQASIRKTRSGRERREIYKDLKELRKEFREREAR 396
Query: 342 AVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGD 401
V ++ + VVL TL GA +L N FD+V+IDEA+QALE CW+ LL S+ ILAGD
Sbjct: 397 CVDHLVTESKVVLATLHGAGGHQLKNQKFDVVLIDEASQALEAQCWVPLLSASKAILAGD 456
Query: 402 HLQLPPTVQSV---------------EAEKKG-------------LGRTLFERLADLYGD 433
HLQLPPT++S A + G L TLF+RL L+G
Sbjct: 457 HLQLPPTIKSTTTNTPSGSSRKLKSSNAIQSGADDLTISSLPITSLETTLFDRLLSLHGP 516
Query: 434 EVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLI 482
+ MLT QYRMHE IM++ S +LY SK+ A P ++ T T L+
Sbjct: 517 TIKRMLTTQYRMHEKIMSFPSCELYESKLIAADHVKARLLKDLPCDIQDTDDTCEPLVFY 576
Query: 483 DIAGCDMEEKKDE-----EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVL 537
D G + E+ ++ DS N EA + H + LI +G+ DI +ITPY AQV L
Sbjct: 577 DTQGGEFPERIEDGELLLADSKSNGLEAAIVARHVQNLIAAGLREEDIAVITPYNAQVAL 636
Query: 538 L-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
L ++LR ++ +E+ +VDGFQGREKEA+++S+VRSN+++EVGFL ++RR+NVA+TR
Sbjct: 637 LAQLLR---ERHPGLEIGSVDGFQGREKEAVVVSLVRSNAEREVGFLGEKRRLNVAMTRP 693
Query: 597 RRQCCLVCDTETVS-SDGFLKRLIEYFEEHAE--YLSGSEYLN 636
RR C+ D+ET+S FLKR ++Y EE+++ Y +EY+
Sbjct: 694 RRHLCVCGDSETISRGSPFLKRWMDYLEENSDLRYPDAAEYMQ 736
>gi|213407736|ref|XP_002174639.1| DNA-binding protein SMUBP-2 [Schizosaccharomyces japonicus yFS275]
gi|212002686|gb|EEB08346.1| DNA-binding protein SMUBP-2 [Schizosaccharomyces japonicus yFS275]
Length = 655
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 256/622 (41%), Positives = 367/622 (59%), Gaps = 52/622 (8%)
Query: 48 TAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKG----DVLPAHKFGTHDVVVLKP---- 99
T Q G +LN++ +TGL GK +LE + G LPAH FGT DVV ++
Sbjct: 46 TLQNNGLALLNMRIASGRTGLGGKMILELERDAGFCSIPALPAHSFGTGDVVRIQESGAS 105
Query: 100 ---NKADLGSPALGQGVVYRLKDSSITVAF---DDIPEEGLNSPLRLEKLANEVTYRRMK 153
N AD S VV R+++++I++A D IP+ L + KLAN VT+ +M+
Sbjct: 106 KSLNSAD--SSISWDAVVVRVRENTISLALENDDKIPDG--RKRLWIFKLANRVTFEKMR 161
Query: 154 DALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKN 213
+ QLSK + + L+ VL G +K T+ +++A +N++L+ SQK A+S A+S+
Sbjct: 162 SCIQQLSK-ISLESSTPLVSVLLGMRKSTLASEELALTYYNTDLNESQKKAVSFAVSAPE 220
Query: 214 VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHP 273
+ ++HGPPGTGKT T+VE++ Q K G ++L C SN++VDN+VERL P + +VRLGHP
Sbjct: 221 LALIHGPPGTGKTHTLVEVVRQFAKLGQRVLVCGPSNLSVDNLVERLAPCGIPMVRLGHP 280
Query: 274 ARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSK 333
ARLLP V+ +L G+ + I ++ AL+ K+ KTK +REI K +R L+K
Sbjct: 281 ARLLPGVVNYSLAYLSRTGNAGEVLRAISQDADALHAKISKTKSGREKREIYKSIRALNK 340
Query: 334 EERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKG 393
+ +K + V D+I + VV TL GA S+ L + FD+VIIDEA+QALE CWI LL+
Sbjct: 341 DYKKYEDKVVRDIIARSQVVFATLHGAGSKLLSHKQFDVVIIDEASQALEAQCWIPLLQT 400
Query: 394 SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWS 453
+ ILAGDH QLPP V++ KG +LFE L YG V L VQYRMHE I +S
Sbjct: 401 KKAILAGDHHQLPPNVRT-----KGRYVSLFESLLSRYGPRVKRFLNVQYRMHEVISAFS 455
Query: 454 SKQLYNSKIKAHP----------SGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDST---- 499
SK Y ++K SGV+ T T L D M E ++E+S
Sbjct: 456 SKSFYEGQLKPDSSVKDRLLKDLSGVEDTDLTNDALYFYDT----MHEYFEDENSVSEKS 511
Query: 500 -------MNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNME 552
N+ EA++ HA L+ +G++ S+I IITPY AQ LL+ L + + +E
Sbjct: 512 VLLQMSKSNQWEAKIVCNHAASLVDAGLNPSEIAIITPYNAQATLLRNLLHERNLA--IE 569
Query: 553 VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV-SS 611
V ++D QGREKEAII S+VRSN ++E+GF+S++RR+NVA+TRA+R C+V D TV +
Sbjct: 570 VGSIDSVQGREKEAIIFSLVRSNDEREIGFMSEKRRLNVAITRAKRHLCVVGDAMTVRNG 629
Query: 612 DGFLKRLIEYFEEHAEYLSGSE 633
FLK I+Y EE+A L+ +E
Sbjct: 630 SDFLKSWIDYMEENAIVLAPTE 651
>gi|322707009|gb|EFY98588.1| DNA-binding protein SMUBP-2 [Metarhizium anisopliae ARSEF 23]
Length = 717
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 274/711 (38%), Positives = 396/711 (55%), Gaps = 101/711 (14%)
Query: 10 QSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLM 69
+ AV + F S L+D E ++E+ + ++ + Q+ G I NL +TGL
Sbjct: 4 KDAVDVPSFASTQLALLDRELKSEVDETSQLISNHSPTGLQRAGLAITNLVVSSQRTGLG 63
Query: 70 GKTLLEF-----QSTKGDVLPAHKFGTHDVVVLKPNKADLGSPAL----------GQGVV 114
GKT+LE S G+ LP H T D+V++ A GS +GVV
Sbjct: 64 GKTVLELGPDSATSATGE-LPEHGIRTGDIVLVAEQPA--GSAKKREVRELERKGSRGVV 120
Query: 115 YRLKDSSITVAFDDIPEEGLNSPLR--LEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI 172
+++ + VA DD +E + P R L KLA+EVTYRRM + +L +G+ + +
Sbjct: 121 TKVQRGFVNVALDDGKDE-VPFPGRVWLVKLADEVTYRRMNQTMEKL-QGMVEAEYSSFM 178
Query: 173 PVLFGEQKPTVLKKDIAFKP-------FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGK 225
VLFG P+ L +D++ P + L+ SQKDAI AL+S+ + ++HGPPGTGK
Sbjct: 179 RVLFGLSSPSPLPQDLSRDPQVGDIEWTDPTLNDSQKDAIRFALASREIALIHGPPGTGK 238
Query: 226 TTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESAL 285
T T++E+ILQ VKR ++L C SNI+VDNIVERL PH++ ++RLGHPARLLP VL +L
Sbjct: 239 THTLIELILQMVKRKQRVLVCGPSNISVDNIVERLSPHKLLILRLGHPARLLPSVLHHSL 298
Query: 286 DAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTD 345
D + ++ D+R EM A + KTK RR+I +L+ L KE R+R++ V++
Sbjct: 299 DVLTNTSEAGAIVKDVRAEMDAKQASIKKTKSGKERRDIYSDLKELRKEYRERERRCVSN 358
Query: 346 VIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQL 405
+I + VVL TL G+ +L N FD+VIIDEA+QALE CW+ LL + + AGDHLQL
Sbjct: 359 LISGSKVVLATLHGSGGFQLRNEEFDVVIIDEASQALEAQCWVPLLSARKAVCAGDHLQL 418
Query: 406 PPTVQSVEAEK------------KG--LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN 451
PPT++S+ ++ KG L TLF+RL L+G + MLT QYRMHE IM
Sbjct: 419 PPTIKSLNSKANPRPKDERLPIIKGMTLETTLFDRLLALHGPSIKRMLTTQYRMHEEIMR 478
Query: 452 WSSKQLYNSKIKAHPS-----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEED--- 497
+ S++LY SK+ A + GV+ T L+ ID G D E+ +E+D
Sbjct: 479 FPSEELYGSKLVAADAVKARLLKDLEYGVQDNEDTSAPLIFIDTQGGDFPERSEEDDKDN 538
Query: 498 -----------STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDD 546
S NE EA + + HA +L+ +GV DI I+TPY AQ+ +L L+ +
Sbjct: 539 PKKGRGSLHSESKSNEMEAALVLQHAGQLVGAGVRPEDIAIVTPYNAQLGVLAPLK---E 595
Query: 547 KLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN---------------- 590
K +E+ +VDGFQGREKEA+I+S+VRSN EVGFL ++RR+N
Sbjct: 596 KFPGIELGSVDGFQGREKEAVIVSLVRSNPDGEVGFLGEKRRLNGEFNPSSSSPTPYNCS 655
Query: 591 -------------VAVTRARRQCCLVCDTETVS-SDGFLKRLIEYFEEHAE 627
VA+TR RR ++ D+ETV FLK+ +E+ E++A+
Sbjct: 656 RHIAREITLTFLAVAMTRPRRSLTVIGDSETVKRGSNFLKKWMEFLEDNAD 706
>gi|320036315|gb|EFW18254.1| DNA helicase [Coccidioides posadasii str. Silveira]
Length = 738
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 265/703 (37%), Positives = 388/703 (55%), Gaps = 107/703 (15%)
Query: 35 SASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF------QSTKG------- 81
S S S A+R Q G + L V+ +TG+ G+ + EF +S KG
Sbjct: 40 SLSFVSPATRR--ALQAAGHALTALVLVNCRTGMGGREVGEFGVDAALKSAKGKKTGEGA 97
Query: 82 ----------DVLPAHKFGTHDVVVLKP------------------NKADLGSPALGQGV 113
+ LPAH DVV ++P K D +GV
Sbjct: 98 LPTANGDGARESLPAHGIRVGDVVRVEPVVSGARGGSGSKAGKGKVGKDDEDVTKGLEGV 157
Query: 114 VYRLKDSSITVAFDDIPEEG----------LNSPLRLEKLANEVTYRRMKDALIQLSKGV 163
V ++ + S+ VAFD+ G L L KLAN++TYRRMK ++++ K
Sbjct: 158 VTKIGERSVWVAFDERGRPGKQDDEGAAGLWGQKLWLVKLANDITYRRMKQTMVRMEKMA 217
Query: 164 QNGPAAGLIPVLFGEQKPTVLKKDIA--FKPFNSNLDHSQKDAISKALSSKNVFMLHGPP 221
++ + + VLFG P+ A + +L+ SQK+AI AL+S+ + ++HGPP
Sbjct: 218 ES-EHSSFMRVLFGHTTPSPPDWSSASSLDFIDPSLNDSQKEAIRFALASREIALIHGPP 276
Query: 222 GTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVL 281
GTGKT T++E+ILQ ++R +IL C SNI+VDNIVERL PH++ LVR+GHPARLL V+
Sbjct: 277 GTGKTHTLIELILQLLRRNLRILVCGPSNISVDNIVERLAPHKIPLVRIGHPARLLSSVV 336
Query: 282 ESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQL 341
+ +L+A D +++ D+R+E+ + KT+ RREI K+L+ L KE R+R+
Sbjct: 337 DHSLEALTQTSDAAAIVKDVRREIDEKQASIRKTRSGRERREIYKDLKELRKEFREREAR 396
Query: 342 AVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGD 401
V ++ + VVL TL GA +L + FD+V+IDEA+QALE CW+ LL S+ ILAGD
Sbjct: 397 CVDHLVTESKVVLATLHGAGGHQLKSQKFDVVLIDEASQALEAQCWVPLLSASKAILAGD 456
Query: 402 HLQLPPTVQSV---------------EAEKKG-------------LGRTLFERLADLYGD 433
HLQLPPT++S A + G L TLF+RL L+G
Sbjct: 457 HLQLPPTIKSTTTNTPSGSSRKLKSSNAIQSGADDLTISSLPITSLETTLFDRLLSLHGP 516
Query: 434 EVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLI 482
+ MLT QYRMHE IM++ S +LY SK+ A P ++ T T L+
Sbjct: 517 TIKRMLTTQYRMHEKIMSFPSCELYESKLIAADHVKARLLKDLPCDIQDTDDTCEPLVFY 576
Query: 483 DIAGCDMEEKKDE-----EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVL 537
D G + E+ ++ DS N EA + H + LI +G+ DI +ITPY AQV L
Sbjct: 577 DTQGGEFPERIEDGELLLADSKSNGLEAAIVARHVQNLIAAGLREEDIAVITPYNAQVAL 636
Query: 538 L-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
L ++LR ++ +E+ +VDGFQGREKEA+++S+VRSN+++EVGFL ++RR+NVA+TR
Sbjct: 637 LAQLLR---ERHPGLEIGSVDGFQGREKEAVVVSLVRSNAEREVGFLGEKRRLNVAMTRP 693
Query: 597 RRQCCLVCDTETVS-SDGFLKRLIEYFEEHAE--YLSGSEYLN 636
RR C+ D+ET+S FLKR ++Y EE+++ Y +EY+
Sbjct: 694 RRHLCVCGDSETISRGSPFLKRWMDYLEENSDLRYPDAAEYMQ 736
>gi|322701017|gb|EFY92768.1| DNA-binding protein SMUBP-2 [Metarhizium acridum CQMa 102]
Length = 724
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 258/645 (40%), Positives = 371/645 (57%), Gaps = 73/645 (11%)
Query: 10 QSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLM 69
+ AV + F S L+D E ++E+ + ++ + Q+ G I NL +TGL
Sbjct: 77 KDAVDVPSFASTQLALLDRELKSEVDETSQLISNHSPAGLQRAGLAITNLVVFSQRTGLG 136
Query: 70 GKTLLEF-----QSTKGDVLPAHKFGTHDVVVLKPNKA---------DL---GSPALGQG 112
GKT+LE ST G+ LP H T D+V++ A DL GS +G
Sbjct: 137 GKTVLELGPDSATSTTGE-LPEHGIRTGDIVLVAEQPAGSAKKREVRDLERKGS----RG 191
Query: 113 VVYRLKDSSITVAFDDIPEE-GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGL 171
VV +++ + VA DD +E L + L KLA+EVTY+RM + +L +G+ + L
Sbjct: 192 VVTKVQRGFVHVALDDGKDEVSLPGRVWLVKLADEVTYKRMNQTMEKL-QGMVEAEYSSL 250
Query: 172 IPVLFGEQKPTVLKKDIA-------FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTG 224
+ VLFG P+ L +D++ + + L+ SQKDAI AL+S+ + ++HGPPGTG
Sbjct: 251 MRVLFGLSSPSPLPQDLSKDSQLGHLEWIDPTLNDSQKDAIRFALASREIALIHGPPGTG 310
Query: 225 KTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESA 284
KT T++E+ILQ VKR +IL C SNI+VDNIVERL PH++ ++RLGHPARLLP VL +
Sbjct: 311 KTHTLIELILQMVKRKQRILVCGPSNISVDNIVERLSPHKLPILRLGHPARLLPSVLHHS 370
Query: 285 LDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVT 344
LD + ++ D+R EM + + KTK RREI +L+ L KE R+R++ V+
Sbjct: 371 LDVLTNTSEAGAIVKDVRAEMDSKQASVKKTKSGKERREIYSDLKQLRKEYRERERKCVS 430
Query: 345 DVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQ 404
++I + VVL TL G+ +L N FD+VIIDEA+QALE CW+ LL + + AGDHLQ
Sbjct: 431 NLIGGSKVVLATLHGSGGFQLRNEEFDVVIIDEASQALEAQCWVPLLSARKAVCAGDHLQ 490
Query: 405 LPPTVQSVEAEKKG--------------LGRTLFERLADLYGDEVTSMLTVQYRMHEHIM 450
LPPT++S+ ++ L TLF+R+ L+G + MLT QYRMHE IM
Sbjct: 491 LPPTIKSLNSKANPRPKDESLPVITGMTLETTLFDRVLALHGPSIKRMLTTQYRMHEEIM 550
Query: 451 NWSSKQLYNSKIKAHPS-----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEED-- 497
+ S++LY SK+ A + GV+ T L+ ID G D E+ +E+D
Sbjct: 551 RFPSEELYGSKLVAADAVKARLLKDLEYGVQDNEDTSAPLIFIDTQGGDFPEQNEEDDKD 610
Query: 498 ------------STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKD 545
S NE EA + M HA RL+ +GV DI I+TPY AQ+ +L L+
Sbjct: 611 NPKKGKGSLHSESKSNEMEAALVMQHAGRLVGAGVRPEDIAIVTPYNAQLGVLAPLK--- 667
Query: 546 DKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
++ +E+ +VDGFQGREKEA+I+S+VRSN EVGFL ++RR+N
Sbjct: 668 ERFPGIELGSVDGFQGREKEAVIVSLVRSNPDGEVGFLGEKRRLN 712
>gi|391871546|gb|EIT80706.1| DNA helicase [Aspergillus oryzae 3.042]
Length = 728
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 268/695 (38%), Positives = 391/695 (56%), Gaps = 102/695 (14%)
Query: 29 EKEAEISASITSGASRNLD-----TAQKKGSTILNLKCVDAQTGLMGKTLLEFQ-----S 78
E EAE+S+S + + ++ T Q G + + +TGL G+ + EF S
Sbjct: 30 EHEAEVSSSTLASTAASVSPSTRRTLQATGYALTGIVLSQCRTGLGGRVVGEFGADAAVS 89
Query: 79 TK--------------------GDVLPAHKFGTH------DVVVLKPNKADLGSPALGQG 112
TK GDV+ ++ G+ D A G P +G
Sbjct: 90 TKNTDGHGKDGEPQLGAHGIRVGDVVRVNEIGSSTKKMGKDKASKDGKPAGTGPPKGPEG 149
Query: 113 VVYRLKDSSITVAF------------DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLS 160
VV R+ + S+ VAF D+ EE L L KLAN+VTYRRM+ + ++
Sbjct: 150 VVTRVGERSVWVAFGQQGGGGRSKEDDEAIEELWGKKLWLIKLANDVTYRRMRQTMEKMG 209
Query: 161 KGVQNGPAAGLIPVLFGEQKPTVLK----KDIAFKPFNSNLDHSQKDAISKALSSKNVFM 216
K +++ + V FG P D+ F + +L+ SQK+AI AL+S+++ +
Sbjct: 210 KIIESD-YTHFMRVAFGHTTPLPPDYGAVGDVEFN--DPSLNDSQKEAIRFALASRDIAL 266
Query: 217 LHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARL 276
+HGPPGTGKT T++E+ILQ V+R ++L C SNI+VDNIVERL P +V +VR+GHPARL
Sbjct: 267 IHGPPGTGKTHTLIELILQMVQRKLRVLVCGPSNISVDNIVERLAPKKVPVVRIGHPARL 326
Query: 277 LPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEER 336
LP VLE +L+ D +S+ D+RKE+ + KT+ +R I ++L+ L +E R
Sbjct: 327 LPSVLEHSLEVLTHTSDAASIVRDVRKEIDQKVASIRKTRFGREKRAIYQDLKELRREFR 386
Query: 337 KRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRC 396
+R+ V ++++ + VVL TL GA +L N FD+VIIDEA+QALE CWI+LL S+
Sbjct: 387 ERESKCVDNLVRESSVVLATLHGAGGHQLKNQKFDVVIIDEASQALEAQCWISLLSASKV 446
Query: 397 ILAGDHLQLPPTVQSVEAEKKG----------------LGR-----TLFERLADLYGDEV 435
+LAGDHLQLPPTV+S + + K LG+ T+F+RL L+G+ +
Sbjct: 447 VLAGDHLQLPPTVKSTDQKSKDVKAGKVDTVNDGDNGVLGKMSLETTMFDRLLSLHGESI 506
Query: 436 TSMLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLIDI 484
MLT QYRMHE IM + S +LY SK+ A P V+ T T+ L+ D
Sbjct: 507 KRMLTTQYRMHETIMRFPSDELYESKLMAGDAVKARLLKDLPYDVEETDDTKEPLVFWDT 566
Query: 485 AGCDMEEKKDEE----------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ 534
G D EK +++ +S NE EA V H L+QSG+ DI +ITPY Q
Sbjct: 567 QGGDFPEKTEDKEVGQKEALLGESKSNEMEAMVVAKHVDNLVQSGLKPEDIAVITPYNGQ 626
Query: 535 VVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAV 593
+ +L ++LR +K +E+ +VDGFQGREKEA+++S+VRSNS+ EVGFL ++RR+NVA+
Sbjct: 627 LAILSQMLR---EKYPGIELGSVDGFQGREKEAVVVSLVRSNSENEVGFLGEKRRLNVAM 683
Query: 594 TRARRQCCLVCDTETVS-SDGFLKRLIEYFEEHAE 627
TR +R C+ D+ET+S GFLKR + + EE+A+
Sbjct: 684 TRPKRHLCVCGDSETISKGSGFLKRWMAFLEENAD 718
>gi|118368904|ref|XP_001017658.1| hypothetical protein TTHERM_00339940 [Tetrahymena thermophila]
gi|89299425|gb|EAR97413.1| hypothetical protein TTHERM_00339940 [Tetrahymena thermophila
SB210]
Length = 676
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 255/615 (41%), Positives = 357/615 (58%), Gaps = 51/615 (8%)
Query: 53 GSTILNLKCVDAQTGLMGKTLLEF--------------QSTKGDVLPAHKFGTHDVVVLK 98
G + LK +TGL G+TL+ F Q K LP KF + D V +
Sbjct: 65 GLAVNRLKLKSVKTGLYGRTLVTFAHPHYSMDKIKESPQLAKMVKLPESKFQSGDNVSIY 124
Query: 99 PNKADLGSPALGQGVVYRLKDSSITVAFDD-IPEEGL-NSPLRLEKLANEVTYRRMKDAL 156
L +GV+++ D VAFD+ + E L N + + NEVTY R L
Sbjct: 125 KQSLTFDGNPLEKGVIFKKNDYKFVVAFDEEVNENQLSNEVISIVMEVNEVTYNRFLKCL 184
Query: 157 IQLSKGVQ--NGPAAGLIPVLFGEQKPT----------VLKKDIAFKPFNSNLDHSQKDA 204
+ + N + L+ VL PT +L K I + +L+ QKDA
Sbjct: 185 QNIEEKYSDVNFKGSQLLRVLLDGSDPTNPNPNIKPVHILSKPIV-DFYKKDLNEEQKDA 243
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
I+ LSS+ + ++HGPPGTGKT TV E+I Q VK G ++LACA SNIAVDN+VERL
Sbjct: 244 INFCLSSQTIGLIHGPPGTGKTMTVCELIYQAVKMGLRVLACAGSNIAVDNMVERLAKTD 303
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRG----DNSSLASDIRKEMKALNGKLLKTKDKNT 320
++++R+GHPAR+LP + E LD ++ + + +L +I K+++ KL K
Sbjct: 304 LKVMRIGHPARMLPTIYEQCLDNKLRKTTCFKELKALKQNINKQLQ----KLQKDISYGE 359
Query: 321 RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA----VSRKLDNTSFDLVIID 376
++EI+K L L KE R+++QL++ +VI++ VV T +GA R FDLV+ID
Sbjct: 360 KKEIKKLLTELRKEMREQEQLSIKEVIQDTQVVCCTNSGAADYIFKRDFGKVEFDLVVID 419
Query: 377 EAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFER-LADLYGDEV 435
E AQALE++CWI +L G R +LAGDH QLPPT++S + +GL TLF+R L + + V
Sbjct: 420 ECAQALELSCWIPILLGKRVVLAGDHKQLPPTIKS---KNQGLSVTLFDRVLKEFQPENV 476
Query: 436 TSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDM-----E 490
+ +L VQYRM++ IM WSS+ +Y ++KAH S + E LL ID AG M E
Sbjct: 477 SRLLKVQYRMNQQIMEWSSQYVYGGQLKAHESVATHSIGGESILLFIDTAGAKMGETINE 536
Query: 491 EKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL-KILRSKDDKLK 549
D+ S N GEA++ + L G+ ++G+ITPY AQV L+ K+ + + +
Sbjct: 537 NANDKNKSKSNLGEADLVKIIFEELKLQGLQEKEVGVITPYNAQVDLIKKLFENNNINTQ 596
Query: 550 NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
+EVSTVDGFQGREKE IIISMVRSN +VGFLSD RRMNVAVTRAR+ CL+ D+ETV
Sbjct: 597 QVEVSTVDGFQGREKECIIISMVRSNPLNQVGFLSDYRRMNVAVTRARKFVCLIGDSETV 656
Query: 610 SSDGFLKRLIEYFEE 624
SSD FL +++YF+E
Sbjct: 657 SSDKFLDEMVKYFQE 671
>gi|169777529|ref|XP_001823230.1| DNA polymerase alpha-associated DNA helicase A [Aspergillus oryzae
RIB40]
gi|83771967|dbj|BAE62097.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 720
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 268/695 (38%), Positives = 391/695 (56%), Gaps = 102/695 (14%)
Query: 29 EKEAEISASITSGASRNLD-----TAQKKGSTILNLKCVDAQTGLMGKTLLEFQ-----S 78
E EAE+S+S + + ++ T Q G + + +TGL G+ + EF S
Sbjct: 22 EHEAEVSSSTLASTAASVSPSTRRTLQATGYALTGIVLSQCRTGLGGRVVGEFGADAAVS 81
Query: 79 TK--------------------GDVLPAHKFGTH------DVVVLKPNKADLGSPALGQG 112
TK GDV+ ++ G+ D A G P +G
Sbjct: 82 TKNTDGHGKDGEPQLGAHGIRVGDVVRVNEIGSSTKKMGKDKASKDGKPAGTGPPKGPEG 141
Query: 113 VVYRLKDSSITVAF------------DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLS 160
VV R+ + S+ VAF D+ EE L L KLAN+VTYRRM+ + ++
Sbjct: 142 VVTRVGERSVWVAFGQQGGGGRSKEDDEAIEELWGKKLWLIKLANDVTYRRMRQTMEKMG 201
Query: 161 KGVQNGPAAGLIPVLFGEQKPTVLK----KDIAFKPFNSNLDHSQKDAISKALSSKNVFM 216
K +++ + V FG P D+ F + +L+ SQK+AI AL+S+++ +
Sbjct: 202 KIIESD-YTHFMRVAFGHTTPLPPDYGAVGDVEFN--DPSLNDSQKEAIRFALASRDIAL 258
Query: 217 LHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARL 276
+HGPPGTGKT T++E+ILQ V+R ++L C SNI+VDNIVERL P +V +VR+GHPARL
Sbjct: 259 IHGPPGTGKTHTLIELILQMVQRKLRVLVCGPSNISVDNIVERLAPKKVPVVRIGHPARL 318
Query: 277 LPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEER 336
LP VLE +L+ D +S+ D+RKE+ + KT+ +R I ++L+ L +E R
Sbjct: 319 LPSVLEHSLEVLTHTSDAASIVRDVRKEIDQKVASIRKTRFGREKRAIYQDLKELRREFR 378
Query: 337 KRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRC 396
+R+ V ++++ + VVL TL GA +L N FD+VIIDEA+QALE CWI+LL S+
Sbjct: 379 ERESKCVDNLVRESSVVLATLHGAGGHQLKNQKFDVVIIDEASQALEAQCWISLLSASKV 438
Query: 397 ILAGDHLQLPPTVQSVEAEKKG----------------LGR-----TLFERLADLYGDEV 435
+LAGDHLQLPPTV+S + + K LG+ T+F+RL L+G+ +
Sbjct: 439 VLAGDHLQLPPTVKSTDQKSKDVKAGKVDTVNDGDNGVLGKMSLETTMFDRLLSLHGESI 498
Query: 436 TSMLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLIDI 484
MLT QYRMHE IM + S +LY SK+ A P V+ T T+ L+ D
Sbjct: 499 KRMLTTQYRMHETIMRFPSDELYESKLMAGDAVKARLLKDLPYDVEETDDTKEPLVFWDT 558
Query: 485 AGCDMEEKKDEE----------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ 534
G D EK +++ +S NE EA V H L+QSG+ DI +ITPY Q
Sbjct: 559 QGGDFPEKTEDKEVGQKEALLGESKSNEMEAMVVAKHVDNLVQSGLKPEDIAVITPYNGQ 618
Query: 535 VVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAV 593
+ +L ++LR +K +E+ +VDGFQGREKEA+++S+VRSNS+ EVGFL ++RR+NVA+
Sbjct: 619 LAILSQMLR---EKYPGIELGSVDGFQGREKEAVVVSLVRSNSENEVGFLGEKRRLNVAM 675
Query: 594 TRARRQCCLVCDTETVS-SDGFLKRLIEYFEEHAE 627
TR +R C+ D+ET+S GFLKR + + EE+A+
Sbjct: 676 TRPKRHLCVCGDSETISKGSGFLKRWMAFLEENAD 710
>gi|310790786|gb|EFQ26319.1| hypothetical protein GLRG_01463 [Glomerella graminicola M1.001]
Length = 690
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 261/677 (38%), Positives = 389/677 (57%), Gaps = 67/677 (9%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
+S+ F + L+ E AE++ S + + G + NL +TGL G+T
Sbjct: 7 LSVPSFATTQIALLSAELAAEVAESSALVSHHAPAALHRAGLALPNLIVGARRTGLGGRT 66
Query: 73 LLEF--QSTKGDVLPAHKFGTHDVVVLKPNKA---------DLGSPALGQGVVYRLKDSS 121
+LE + LP H D+V++ A +L S +GVV R++ +
Sbjct: 67 VLELGADTAVSSELPEHGLRPGDIVLVSEQPAGNAKKKEVKELESKG-ARGVVTRVRRET 125
Query: 122 ITVAFDDIP--EEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQ 179
I VA DD E + + K+A++VT+RRM + +L K ++ A + VLFG
Sbjct: 126 IGVAVDDGKGEEREFAGRVWIVKVADDVTFRRMNQTMEKLEKMTESEYTA-FMRVLFGLS 184
Query: 180 KPTVLKKDIA-------FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEI 232
P+ + +D+A + + +L+ SQKDAI AL+S+ V ++HGPPGTGKT T++E+
Sbjct: 185 SPSPVPQDLAADSELSKIQWIDPSLNDSQKDAIRFALASREVALIHGPPGTGKTHTLIEL 244
Query: 233 ILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRG 292
ILQ +K +IL C SNI+VDNIVERL PH++ ++RLGHPARLLP VL +LD
Sbjct: 245 ILQLIKLDLRILVCGPSNISVDNIVERLAPHKIPILRLGHPARLLPSVLAHSLDVLTQTS 304
Query: 293 DNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADV 352
+ ++ D+R EM A + KT++ +R+I +L+ L KE R+R++ V+++I+ + V
Sbjct: 305 EAGAIVKDVRAEMDAKQASIKKTRNGREKRQIYADLKELRKEFRERERRCVSNLIRESKV 364
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSV 412
VL TL GA +L + FD+VIIDEA+QALE CW+ LL + + AGDHLQLPPT++S+
Sbjct: 365 VLATLHGAGGHQLRDQRFDIVIIDEASQALEAQCWVPLLSAKKAVCAGDHLQLPPTIKSL 424
Query: 413 E------------AEKK----GLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQ 456
AEK+ L TLF+RL L+G + MLT QYRMHE IM + S +
Sbjct: 425 NYRVKAAAVSEDGAEKQIKSMTLETTLFDRLLALHGPSIKRMLTTQYRMHEKIMRFPSDE 484
Query: 457 LYNSKIKAH-----------PSGVKRTSSTEPTLLLIDIAGCDMEEKKDEED-------- 497
LY ++ A P V+ T T L+ ID G D EK +++D
Sbjct: 485 LYEGRLIAAEAVRGRLLKDLPYEVRDTEDTNEPLVFIDTQGGDYPEKNEDDDKDAIKKAK 544
Query: 498 ------STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNM 551
S NE EA + HA++L+ +GV DI ++TPY AQ+ +L L+ ++L +
Sbjct: 545 FSLHGESKSNEMEAALVRQHAQKLVDAGVKPEDIAVVTPYNAQLAVLAPLK---EQLPGI 601
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS- 610
E+ +VDGFQGREKEA+I+S+VRSNS EVGFL ++RR+NVA+TR +R ++ D+ETV
Sbjct: 602 ELGSVDGFQGREKEAVIVSLVRSNSHGEVGFLGEQRRLNVAMTRPKRSLTVIGDSETVKR 661
Query: 611 SDGFLKRLIEYFEEHAE 627
FLKR +++ EE+A+
Sbjct: 662 GSNFLKRWMDFLEENAD 678
>gi|384498945|gb|EIE89436.1| hypothetical protein RO3G_14147 [Rhizopus delemar RA 99-880]
Length = 608
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 261/619 (42%), Positives = 373/619 (60%), Gaps = 61/619 (9%)
Query: 65 QTGLMGKTLLEFQSTKGDVLP----AHKFGTHDVVVLKPNKADLGSPALGQ--GVVYRLK 118
+TGL GK+L++ + ++LP AHK T D+V + K D +G+ GVV R+
Sbjct: 2 RTGLGGKSLIDLELANPNILPPIFPAHKISTGDIVGIDVYKKDKPVKDVGKWSGVVARVT 61
Query: 119 DSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGE 178
+S +TVA ++ L P +++ + M L L K + G + LI VL G+
Sbjct: 62 ESRMTVALSQEVDDEL--PAEIQERC-----QVMLKGLEALQKRCEEG-GSNLINVLLGQ 113
Query: 179 QKPTVLKK--DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQ- 235
+ ++ DI F F+ L+ SQK+A+ AL S + ++HGPPGTGKT T+VEII
Sbjct: 114 SDLSTPERMSDIEF--FDETLNDSQKEAVRFALGSPEIALIHGPPGTGKTYTLVEIIRHL 171
Query: 236 EVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNS 295
+ + K+L C SNI+VDN+VERL HR+++VR+GHPAR+LP V++ LD D+
Sbjct: 172 AINQKQKVLVCGPSNISVDNLVERLAQHRLQVVRVGHPARVLPTVVDHTLDIITRTCDSG 231
Query: 296 SLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLT 355
+ SDIRKEM K+ K+K++ RR + ++ L K+ R R++ + +V+ NA V ++
Sbjct: 232 RIVSDIRKEMDDTLAKIGKSKNRTERRAMYGLMKDLRKDFRVRERRVIEEVLTNAQVTIS 291
Query: 356 TLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS---- 411
TL GA SR + N FD+VIIDEA QALE CWIALLK + ILAGDHLQLPPTV+S
Sbjct: 292 TLNGAASRNMMNREFDVVIIDEATQALEAECWIALLKAKKAILAGDHLQLPPTVKSPVKI 351
Query: 412 ---VEAEKKGL------GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKI 462
+ ++KGL TLF+RL +Y +++ ML VQYRMH+ IM +SSK+LY +K+
Sbjct: 352 GKKMILKRKGLPTDTDLTTTLFDRLLSMYNNKIKRMLMVQYRMHQKIMEFSSKELYENKL 411
Query: 463 KAHPS----------GVKRTSSTEPTLLLIDIA--GCDMEEKKD--EEDSTMNEGEAEVA 508
A S V+ T +T+ L++ID + G E D EE S NE E E+A
Sbjct: 412 IADASVAEHVLADLPDVESTENTDMPLVIIDTSDTGLSHEVTDDAQEEQSKANELEVELA 471
Query: 509 MAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAII 568
+ H K L+ G+ IG+ITPYA QV K+ R + +EV TVDGFQGREKEAI+
Sbjct: 472 VRHIKTLLNDGLQQDQIGVITPYAFQVS--KLRREIRENWPGIEVGTVDGFQGREKEAIL 529
Query: 569 ISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV------------SSDGFLK 616
+S+VRSN EVGFL+++RR+NVA+TRA+R C++CD+ET+ + GFLK
Sbjct: 530 LSLVRSNDIGEVGFLAEKRRLNVAMTRAKRHLCVICDSETLLGNKGGGSAPVRNDGGFLK 589
Query: 617 RLIEYFEEHAEYLSGSEYL 635
R IE+ E A+ L SE++
Sbjct: 590 RWIEWLNEEAD-LRFSEFV 607
>gi|451845629|gb|EMD58941.1| hypothetical protein COCSADRAFT_261831 [Cochliobolus sativus
ND90Pr]
Length = 708
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 268/693 (38%), Positives = 388/693 (55%), Gaps = 88/693 (12%)
Query: 18 FVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQ 77
F S L+ E EAE+S + S + G ILNL +TGL GKT+LE
Sbjct: 10 FASTQLTLLSAELEAELSETNELLTSHTPSALARAGLAILNLNITSIRTGLGGKTVLELG 69
Query: 78 STKGDV-------LPAHKFGTHDVVVL---------KPNKADLGSPALGQGVVYRLKDSS 121
V +P H D+V + K K + + +GVV R++ +
Sbjct: 70 LDSAVVNKGAAPDIPEHGIRVGDIVAVQEQVGASAKKGEKKEAARRGV-EGVVLRVRREN 128
Query: 122 ITVAFDDIPEEGLNSPLRLE--KLANEVTYRRMKDALIQLSK-GVQNGPAAGLIPVLFGE 178
+ V D ++G+N RL KLAN+VTY+RM + +L K G Q+ + + VLFG+
Sbjct: 129 VEVVLDREEDDGVNGGGRLWIVKLANDVTYKRMNQTMSRLQKLGDQD--YSPFMRVLFGQ 186
Query: 179 QKPTVLKKDI--------AFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVV 230
P+ L KD+ + + +L+ SQK+AI AL+S+ V ++HGPPGTGKT T++
Sbjct: 187 ASPSPLPKDLNDPSNPLHKLEWIDPSLNDSQKEAIRFALASREVALIHGPPGTGKTHTLI 246
Query: 231 EIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVL 290
E+ILQ +K+ ++L C SNI+VDNIVERL H+V +VRLGHPARLLP VL +LD
Sbjct: 247 ELILQLLKQKLRLLVCGPSNISVDNIVERLASHKVPMVRLGHPARLLPSVLSHSLDVLTR 306
Query: 291 RGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNA 350
+ ++L D+RKEM + KT++ RR+I EL+ L +E R+R++ V +++ +
Sbjct: 307 TSEAAALVEDVRKEMDEKQASIRKTRNAKERRQIYTELKELRQEFREREKGCVNNLVTGS 366
Query: 351 DVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL--KGSRCILAGDHLQLPPT 408
VVL TL GA L FD+VI+DEA+QALE CW+ LL K ++ +LAGDHLQLPPT
Sbjct: 367 KVVLATLHGAGGFHLKGQEFDVVIVDEASQALEAQCWVPLLWTKANKLVLAGDHLQLPPT 426
Query: 409 VQSVEAE-------------------------KKG----LGRTLFERLADLYGDEVTSML 439
++S+ ++ K+G L TLF+RL L+G + ML
Sbjct: 427 IKSLNSKEAKTAKKSKDKKTKDAEDNADRSMLKQGEDVTLETTLFDRLLALHGPSIKRML 486
Query: 440 TVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLIDIAGCD 488
T QYRMHE IM + S +LY+SK+ A V+ T T L+ D G D
Sbjct: 487 TTQYRMHEKIMRFPSDELYDSKLVAADFVKARLLKDLKYEVQETEDTTEPLVFWDTQGGD 546
Query: 489 MEEKKDEE-------------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQV 535
EK ++E DS NE EA + H + L+ +GV DI ++TPY AQ+
Sbjct: 547 FPEKVEDEGVIGKGGKGMILGDSKSNEAEAALVRMHVRSLVAAGVKPEDIAVVTPYNAQL 606
Query: 536 VLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
LL + ++ ME+ +VDGFQGREKEA+I+S VRSN++ EVGFL ++RR+NVA+TR
Sbjct: 607 ALLAGMLK--EEYPGMELGSVDGFQGREKEAVIVSTVRSNAEHEVGFLGEKRRLNVAMTR 664
Query: 596 ARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE 627
+R C++ D+ET+S FLK +++ E+HA+
Sbjct: 665 PKRHLCVIGDSETISKGSKFLKAWMQHLEDHAD 697
>gi|378727141|gb|EHY53600.1| hypothetical protein HMPREF1120_01789 [Exophiala dermatitidis
NIH/UT8656]
Length = 715
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 264/707 (37%), Positives = 397/707 (56%), Gaps = 96/707 (13%)
Query: 9 KQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGL 68
K + + F++ + L+ +E++AE++ + +S T + G IL+L +TGL
Sbjct: 7 KHTVLPPSAFLATLISLLSIEQDAEVAETTLLLSSTPPSTLARAGLAILSLSIQSLKTGL 66
Query: 69 MGKTLLEF--------QSTKGDVLPAHKFGTHDVVVL---------KPNKADLGSPALGQ 111
G++++E + +KG+ LP H T D+V L K +L + +
Sbjct: 67 GGRSVVELGLDSAVINKDSKGE-LPEHGIRTGDIVRLGEMPKGTAKKKEVNELKGKGV-E 124
Query: 112 GVVYRLKDSSITVAF------DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQN 165
GVV R+ + ++ VA DD+ E + L L KLAN+VT++RM AL +L K ++
Sbjct: 125 GVVTRVGERAVWVALGKEGGSDDV-EAVPDGKLWLVKLANDVTFKRMNQALTKLLKTPES 183
Query: 166 GPAAGLIPVLFGEQKPTV----LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPP 221
L VL G P KDI F ++ L+ SQ+DA+ ALSS + ++HGPP
Sbjct: 184 SYTL-LQRVLLGLSSPGAPDPQQAKDIVF--HDATLNDSQQDAVRFALSSPEIALIHGPP 240
Query: 222 GTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERL--VPHRVRLVRLGHPARLLPQ 279
GTGKT T++E+ILQ +K+G ++L C SNI+VDNIVERL V +VRLGHPARLLP
Sbjct: 241 GTGKTYTLIELILQFLKQGQRVLVCGPSNISVDNIVERLALTAPNVPIVRLGHPARLLPS 300
Query: 280 VLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQ 339
VL +L+ + + + SD+RKEM + KT++ RR I +L+ L KE R+R+
Sbjct: 301 VLNHSLEILTRTSEAAEIVSDVRKEMDEKQASIRKTRNGRERRAIYADLKELRKEYRERE 360
Query: 340 QLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGS----R 395
+ ++K + VVL+TL GA S +L N FD+++IDEA+QA+E CWI L+ G +
Sbjct: 361 GRCIDGLVKGSKVVLSTLHGAGSHQLRNEQFDVLVIDEASQAMEPHCWIPLVFGGNGIKK 420
Query: 396 CILAGDHLQLPPTVQSVE-------------------------------AEKKGLGRTLF 424
+LAGDHLQLPPTV+S + A+ L T+F
Sbjct: 421 LVLAGDHLQLPPTVKSADNKDNKADKKAKIKSLEDELAKLSIKDEEIKAAKNWSLETTMF 480
Query: 425 ERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSK-----------IKAHPSGVKRTS 473
+RL ++G + +L QYRMHE IM + S +LY+ K +K P V+ T
Sbjct: 481 DRLLAIHGSGIKRLLNTQYRMHEKIMRFPSDELYDGKLVAADAVKARLLKELPYEVQATE 540
Query: 474 STEPTLLLIDIAGCDMEEKKDEE------------DSTMNEGEAEVAMAHAKRLIQSGVH 521
T L+ D G D EK +++ DS NE EA VA H LI++GV
Sbjct: 541 DTTEPLVFFDTQGGDFSEKTEDDSGGQVHKSVLLGDSKSNETEAAVAAMHVTHLIEAGVK 600
Query: 522 ASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVG 581
DI I+TPY AQ+ +L L + N+E+ +VDGFQGREKEA+++S+VRSN++++VG
Sbjct: 601 EEDIAIVTPYNAQLAILSSLLKT--RYPNIELGSVDGFQGREKEAVVVSLVRSNAEQQVG 658
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVS-SDGFLKRLIEYFEEHAE 627
FL+++RR+NVA+TR +R C++ D+ETVS FLKR +++ E++A+
Sbjct: 659 FLAEKRRLNVAMTRPKRHLCVIGDSETVSRGSPFLKRWMKFLEDNAD 705
>gi|298715439|emb|CBJ28050.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1242
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 274/761 (36%), Positives = 394/761 (51%), Gaps = 135/761 (17%)
Query: 6 TKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQK---KGSTILNLKCV 62
T VS+ E+ V L+ LE++ E+ +G L TAQ+ +G +++ L
Sbjct: 9 TARDTGPVSINEWARVQRKLLRLERDEEVEQ--VAGMINQL-TAQECMERGVSLVPLAVT 65
Query: 63 DAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALG----QGVVYRLK 118
TGL G+ + KG LPAH+ G D V L +K G G GVV ++
Sbjct: 66 GLSTGLYGRACVSVGDPKGRPLPAHRLGAGDQVRLYSSKGGKGDVEGGISEISGVVGKVT 125
Query: 119 DSSITVAFDDIPEEG-LNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFG 177
+ ++ V +D + G L +PLRL+ +A+E T++++ L L K GPA +I VLFG
Sbjct: 126 EGTVEVISEDADDAGSLRAPLRLDVVASEATHKKLMLGLDALEKYPGGGPAERVINVLFG 185
Query: 178 EQKPTVLKKDIAFKPFNS-------NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVV 230
+ P+ P + +L+ SQ++A++ AL++++V ++HGPPGTGKTTTVV
Sbjct: 186 SEPPSAAAVAPTGPPAATLSSLALRSLNDSQREAVAFALATRDVALIHGPPGTGKTTTVV 245
Query: 231 EIILQEVKRGSKILACAASNIAVDNIVERLVP---------------------------- 262
++ + V RG + L CA SN+AVD ++E+LV
Sbjct: 246 ALVQEAVARGWRCLVCAPSNVAVDGMLEKLVAAGEEGGGGSAGGGGGGGGGGGGYGGKNI 305
Query: 263 -HRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKL--------- 312
R R+VR+GHPARLLPQVLE +++A V R + +++ D+RK++ L G+L
Sbjct: 306 GGRPRVVRMGHPARLLPQVLEHSMEALVSRHEGTAIVKDVRKDIDTLLGRLHGESGTGGG 365
Query: 313 ----LKTKDKNTRREIQKELRTLSK--EERKRQQLAVTDVIKNADVVLTTLTGAVSRKLD 366
+R I+ R ++ E R R+ V +V+++ DVVL T GA + L
Sbjct: 366 GGSGGAGGVSKSRSRIRGADRKGARMEEARAREGKVVQEVLRSRDVVLATCVGAATHSLR 425
Query: 367 NTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL------- 419
FDLV+IDEAAQALE ACWI +LKG R +LAGDH QL PTV+S +AE L
Sbjct: 426 EEEFDLVVIDEAAQALEAACWIPILKGRRLVLAGDHKQLAPTVKSRKAEAGCLLPSEAVS 485
Query: 420 -------------------------------------GRTLFERLADLYGDEVTSMLTVQ 442
G T+F+R+ G V ML VQ
Sbjct: 486 VPPPHAPARSPGAHGGNSKDGGGVGVGTGGGGGGDGLGLTMFDRVLRDLGHGVCRMLNVQ 545
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEP------------------------- 477
YRM+ I +W+S ++Y + AHPS +R P
Sbjct: 546 YRMNRDICDWASGEMYGGLLLAHPSVAERELPDLPHTSAAAASSSSSTKEEEEGAEMWAA 605
Query: 478 TLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVL 537
+LL+D GCDM E+ S NE EAEVA+ H K L+ +GV S++ +I+PY QV L
Sbjct: 606 VMLLVDTTGCDMPEEDAGGGSRRNEREAEVAVRHVKGLLNAGVRESEVAVISPYNGQVNL 665
Query: 538 LK-ILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
LK +LR + +EV +VDGFQG EKEAI++S+VRSN+ K+VGFL+D RR+NVAVTRA
Sbjct: 666 LKRLLRPEH---PGVEVRSVDGFQGGEKEAIVLSLVRSNAGKKVGFLADARRLNVAVTRA 722
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+R +VCD E SD F+ RL+ + E+ EY S E E
Sbjct: 723 KRHVAIVCDAECCGSDPFIGRLLRHVEDRGEYRSALELTPE 763
>gi|154273843|ref|XP_001537773.1| hypothetical protein HCAG_07195 [Ajellomyces capsulatus NAm1]
gi|150415381|gb|EDN10734.1| hypothetical protein HCAG_07195 [Ajellomyces capsulatus NAm1]
Length = 743
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 268/744 (36%), Positives = 395/744 (53%), Gaps = 122/744 (16%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEI-----SASITSGA---SRNLDTAQKKGSTILNLKCV 62
+ + +Q F L+ E EAEI SASI A + T Q G ++ L +
Sbjct: 3 TPIPIQAFAQTQTELLLAEHEAEIASSPLSASIAQSAGISASTRRTLQAAGYALIGLVLI 62
Query: 63 DAQTGLMGKTLLEF-------QSTKG---------------DVLPAHKFGTHDVVVLK-- 98
+ +TG+ G+ + EF +G L AH DVV ++
Sbjct: 63 NCRTGMGGREVGEFGVDSAIGSGARGGKESNGDGGNGDGGPQRLGAHGMRVGDVVRVEDV 122
Query: 99 -------------PNKADLGSPALGQGVVYRLKDSSITVAF------------DDIPEEG 133
+ + AL +GVV R+ + SI VAF ++ E+
Sbjct: 123 AAGTRGGGGRARGSKEEERKDKAL-EGVVTRVGERSIWVAFGGQRVAGGKGRDEESIEDL 181
Query: 134 LNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK-KDIAFKP 192
+ + KLAN++TYRRMK + +L ++ + V+FG P+ + I
Sbjct: 182 WGKKVWMVKLANDITYRRMKQIMAKLGSMTESDYTY-FMRVVFGHSTPSPVDLSSIGTIE 240
Query: 193 F-NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNI 251
F + L+ SQ++AI AL++K + ++HGPPGTGKT T++E+ILQ +++ +IL C SN+
Sbjct: 241 FIDPTLNDSQREAIQFALAAKEIALIHGPPGTGKTYTLIELILQFLRQNLRILVCGPSNV 300
Query: 252 AVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGK 311
+VDNIVERL PH+V LVR+GHPARLL VL+ +L+ + D +++ DIRKE++
Sbjct: 301 SVDNIVERLAPHKVPLVRIGHPARLLSAVLDHSLEVLIQTSDAAAIVKDIRKEIEVKQAG 360
Query: 312 LLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+ KT+ RREI ++L+ L KE R+R+ V +++ + VVL TL GA +L N FD
Sbjct: 361 IRKTRSGRERREIYRDLKELRKEFRERESKCVGNLVTDCKVVLATLHGAGGHQLRNQKFD 420
Query: 372 LVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKG------------- 418
+VIIDEA+QALE CW+ LL S+ ILAGDHLQLPPTV+S + G
Sbjct: 421 VVIIDEASQALEAQCWVPLLSASKAILAGDHLQLPPTVKSATLKFSGGVENGKSPDDEQS 480
Query: 419 -------------------LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYN 459
L TLF+RL L+G + MLT QYRMHE IM + S++LY
Sbjct: 481 VLRMGKDSNVGQHKAKGGTLEMTLFDRLLSLHGPAIKRMLTTQYRMHEKIMQFPSQELYE 540
Query: 460 SKIKAH-----------PSGVKRTSSTEPTLLLIDIAGCDMEEKKDEE------------ 496
SK+ A P V+ T T L+ D G D EK +E
Sbjct: 541 SKLIAADAVKLRLLKDLPYEVEETDDTREPLVFYDTQGGDFPEKVEEPAVMPKQKQISLF 600
Query: 497 -DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVST 555
+S NE EA + H + LI +GV D+ ++TPY AQ+ LL + DK +E+ +
Sbjct: 601 AESKSNEMEAYLVARHVENLIGAGVKPEDVAVVTPYNAQLALLSSMLK--DKYPGLELGS 658
Query: 556 VDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV-SSDGF 614
VDGFQGREKEA+I+S+VRSN + EVGFL+++RR+NVA+TR +R C+ D+ET+ + F
Sbjct: 659 VDGFQGREKEAVIVSLVRSNPEHEVGFLAEKRRLNVAMTRPKRHLCICGDSETIRGGNQF 718
Query: 615 LKRLIEYFEEHAE--YLSGSEYLN 636
L+R +++ EE+++ Y EY+
Sbjct: 719 LRRWMDFLEENSDLRYPDAGEYMQ 742
>gi|346979330|gb|EGY22782.1| DNA-binding protein SMUBP-2 [Verticillium dahliae VdLs.17]
Length = 649
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 256/679 (37%), Positives = 369/679 (54%), Gaps = 105/679 (15%)
Query: 9 KQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGL 68
K+ S+ F S L+ E A+++ + T AS T Q+ G + +L +T
Sbjct: 4 KEEPPSIPLFASTQLALLSSELAADLAQTSTLLASHAPATLQRAGLALTSLLPQARRTSP 63
Query: 69 MGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDD 128
G+TLLE L P+ A T D
Sbjct: 64 SGRTLLE---------------------LAPDPA--------------------TAKTQD 82
Query: 129 IPEEGLNSPLRL-----------EKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFG 177
+PE GL E LA+EVTY+RM + +L K + + + VLFG
Sbjct: 83 LPEHGLRPWGHCQGRQGRRGEGAEGLADEVTYKRMNQTMEKLQK-MPEAEYSSFMRVLFG 141
Query: 178 EQKPTVLKKDIA-------FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVV 230
P+ + D+A + + +L+ SQKDAI AL+S+ V ++HGPPGTGKT T++
Sbjct: 142 LSSPSPIPVDLAADGELGKLEWIDPSLNDSQKDAIRFALASREVALIHGPPGTGKTHTLI 201
Query: 231 EIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVL 290
E+ILQ V+R +IL C SNI+VDNIVERL PH++ ++RLGHPARLLP VL +LD
Sbjct: 202 ELILQLVRRDQRILVCGPSNISVDNIVERLAPHKIPIIRLGHPARLLPSVLAHSLDVLTH 261
Query: 291 RGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNA 350
++ D+R EM A L K + RR I +L+ L KE R+R++ + +++ +
Sbjct: 262 TSSAGAIVQDVRAEMDAKQASLKKARTGRDRRAIYADLKDLRKEYRERERGCLRELVGGS 321
Query: 351 DVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQ 410
VVL TL GA +L + FD+VIIDEA+QALE CW+ LL+ ++ + AGDHLQLPPT++
Sbjct: 322 KVVLATLHGAGGFQLRDEKFDVVIIDEASQALEAQCWVPLLRANKVVCAGDHLQLPPTIK 381
Query: 411 SVEAEK--------------KG--LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSS 454
S+ ++ KG L TLF+RL L+G + ML QYRMHE IM + S
Sbjct: 382 SLNSKTNMPKKKDEEEVPIVKGMTLETTLFDRLLSLHGPSIKRMLITQYRMHEAIMRFPS 441
Query: 455 KQLYNSK-----------IKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEE------- 496
+LY + +K P V+ T T L+ ID G D EK +E+
Sbjct: 442 DELYEGRLVAAESVATRLLKDMPYAVQDTEDTNEPLVFIDTQGGDFPEKSEEDSDDAAKK 501
Query: 497 -------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK 549
+S NE EA V HA++L+++G+ DI ++TPY AQ+ LL L+ ++L
Sbjct: 502 AKLSLNGESKSNEMEAAVVRQHARQLVEAGIKPEDIAVVTPYNAQLALLAPLK---EELP 558
Query: 550 NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
+E+ +VDGFQGREKEA+I+S+VRSN EVGFL+++RR+NVA+TR +R +V D+ETV
Sbjct: 559 GIELGSVDGFQGREKEAVIVSLVRSNGDGEVGFLAEKRRLNVAMTRPKRSLTVVGDSETV 618
Query: 610 S-SDGFLKRLIEYFEEHAE 627
FL+R IE+ EE+A+
Sbjct: 619 KRGSAFLRRWIEFLEENAD 637
>gi|425781089|gb|EKV19071.1| DNA helicase, putative [Penicillium digitatum PHI26]
gi|425783223|gb|EKV21082.1| DNA helicase, putative [Penicillium digitatum Pd1]
Length = 690
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 263/685 (38%), Positives = 371/685 (54%), Gaps = 99/685 (14%)
Query: 18 FVSVMAPLIDLEKEAEISASITSGASRNLD-----TAQKKGSTILNLKCVDAQTGLMGKT 72
F + L+ E AE+S+S + + + T Q G + L +TGL G+
Sbjct: 12 FATTQLALLHEEHAAEVSSSKLASTAATVSPSTRRTLQATGYALTGLILSQCRTGLGGRV 71
Query: 73 LLEF---------QSTKGDVLPAHKFGTHDV----VVLKPNKADLGSPALG--------- 110
+ EF +S D P + G+H + VV + A G A G
Sbjct: 72 VGEFAPDPAVASEESRSADGTP--RLGSHGIRVGDVVRVSDIAGSGKRAGGKDKDREREK 129
Query: 111 ------QGVVYRLKDSSITVAF------------DDIPEEGLNSPLRLEKLANEVTYRRM 152
+GVV R D ++ +AF D+ EE + KLAN+VTYRRM
Sbjct: 130 DTEKGVEGVVTRTGDRAVWIAFGRQGGGGMSKEEDEAVEELWGKKVWAMKLANDVTYRRM 189
Query: 153 KDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPF---NSNLDHSQKDAISKAL 209
+ + ++ K + + + V FG P L + A P + L+ SQKDAI AL
Sbjct: 190 RQTMEKMVKMTET-EYSHFMRVAFGHTTPLQLDSE-ACGPVEFTDPTLNDSQKDAIRFAL 247
Query: 210 SSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVR 269
+++++ ++HGPPGTGKT T++E+ILQ V+R ++L C SN++VDNIVERL P +V +VR
Sbjct: 248 AARDIALIHGPPGTGKTHTLIELILQLVRRKKRVLVCGPSNVSVDNIVERLAPKKVPVVR 307
Query: 270 LGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELR 329
+GHPARLLP VLE +L+ D + DIRKE+ + KT+ RR I +L+
Sbjct: 308 IGHPARLLPSVLEHSLEVLTQTSDAGGIVKDIRKEIDEKQASIRKTRSGRERRGIYDDLK 367
Query: 330 TLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIA 389
L KE R+R+ V ++++ + VVL TL GA +L N FD+VIIDEA+QALE CWI+
Sbjct: 368 LLRKEFRQRESKCVDNLVRESSVVLATLHGAGGHQLKNQKFDVVIIDEASQALEAQCWIS 427
Query: 390 LLKGSRCILAGDHLQLPPTVQSV-----EAEKKG------------------LGRTLFER 426
LL + +LAGDHLQLPPTV+S E KG L RTLF+R
Sbjct: 428 LLGAEKVVLAGDHLQLPPTVKSTGQKPKENNSKGTEDKTDTNTDMEILKGVSLERTLFDR 487
Query: 427 LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSST 475
L L+G + MLT QYRMHE IM + S +LY K+ A P V+ T T
Sbjct: 488 LLALHGPGIKRMLTTQYRMHEKIMRFPSDELYEGKLIASDAVKDRLLIDLPYDVEGTDDT 547
Query: 476 EPTLLLIDIAGCDMEEKKDEE---------DSTMNEGEAEVAMAHAKRLIQSGVHASDIG 526
+ L+ D G D EK ++E DS NE EA V H LI +GV +
Sbjct: 548 QEPLVFWDTQGGDFPEKAEDEISKKGVLLGDSKSNEMEAMVVARHVDNLINAGVRPESVA 607
Query: 527 IITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSD 585
+ITPY Q+ LL +ILR +K +E+ +VDGFQGREKEA+++S+VRSN+++EVGFL +
Sbjct: 608 VITPYNGQLALLSRILR---EKYPGLELGSVDGFQGREKEAVVVSLVRSNAEREVGFLGE 664
Query: 586 RRRMNVAVTRARRQCCLVCDTETVS 610
+RR+NVA+TR +R C+ D+ET+S
Sbjct: 665 KRRLNVAMTRPKRHLCICGDSETIS 689
>gi|255939099|ref|XP_002560319.1| Pc15g00940 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584941|emb|CAP82980.1| Pc15g00940 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 716
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 265/702 (37%), Positives = 378/702 (53%), Gaps = 99/702 (14%)
Query: 18 FVSVMAPLIDLEKEAEISASITSGASRNLD-----TAQKKGSTILNLKCVDAQTGLMGKT 72
F S L+ E AE+S+S + + + T Q G + L +TGL G+
Sbjct: 12 FASTQLNLLHEEHAAEVSSSKLASTAATVSPSTRRTLQATGYALTGLILSQCRTGLGGRV 71
Query: 73 LLEF---------QSTKGDVLPAHKFGTHDVVVLKPNK-ADLGSPALG------------ 110
+ EF +S D P + G+H + V + +D+ P
Sbjct: 72 VGEFAPDPAVASEESRAADGTP--RLGSHGIRVGDVVRVSDVTGPGKKVGKDKDKEKEKD 129
Query: 111 -----QGVVYRLKDSSITVAF------------DDIPEEGLNSPLRLEKLANEVTYRRMK 153
+GVV R D ++ +AF D+ E + KLAN+VTYRRM+
Sbjct: 130 AEKGVEGVVTRTGDRAVWIAFGRQGGGGMSKEDDEAVGELWGKKVWAIKLANDVTYRRMR 189
Query: 154 DALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPF---NSNLDHSQKDAISKALS 210
+ ++ K + + + V FG P L + A P + +L+ SQK+AI AL+
Sbjct: 190 QTMEKMVK-MSESEYSHFMRVAFGHTTPLQLDTE-ACGPVEFTDPSLNDSQKEAIQFALA 247
Query: 211 SKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRL 270
S+++ ++HGPPGTGKT T++E+ILQ V+R ++L C SN++VDNIVERL P +V +VR+
Sbjct: 248 SRDIALIHGPPGTGKTHTLIELILQLVQRRKRVLVCGPSNVSVDNIVERLAPKKVPVVRI 307
Query: 271 GHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRT 330
GHPARLLP VLE +L+ D + DIRKE+ + KT+ RR I +L+
Sbjct: 308 GHPARLLPSVLEHSLEVLTQTSDAGGIVKDIRKEIDEKQASIRKTRSGRERRGIYDDLKL 367
Query: 331 LSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIAL 390
L KE R+R+ V ++++ + VVL TL GA +L N FD+VIIDEA+QALE CWI L
Sbjct: 368 LRKEFRERESKCVDNLVRESSVVLATLHGAGGHQLKNQKFDVVIIDEASQALEAQCWIPL 427
Query: 391 LKGSRCILAGDHLQLPPTVQSV-----------EAEKKG------------LGRTLFERL 427
L + +LAGDHLQLPPTV+S EK G L RTLF+RL
Sbjct: 428 LGADKVVLAGDHLQLPPTVKSTGQNSKDQTSKGTEEKTGNNTDTETLKGVSLERTLFDRL 487
Query: 428 ADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTE 476
L+G + MLT QYRMHE IM + S +LY K+ A P V+ T T+
Sbjct: 488 LALHGPGIKRMLTTQYRMHEKIMRFPSDELYEEKLMASDAVKARLLIDLPYEVEGTDDTQ 547
Query: 477 PTLLLIDIAGCDMEEKKDEE---------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGI 527
L+ D G D EK ++E DS NE EA V H LI +G+ I +
Sbjct: 548 EPLVFWDTQGGDFPEKAEDEISQKGALLGDSKSNEMEAMVVARHVDNLIDAGIRPESIAV 607
Query: 528 ITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR 586
ITPY Q+ LL ++LR +K +E+ +VDGFQGREKEA+++S+VRSN++ EVGFL ++
Sbjct: 608 ITPYNGQLALLSRMLR---EKYAGLELGSVDGFQGREKEAVVVSLVRSNAEHEVGFLGEK 664
Query: 587 RRMNVAVTRARRQCCLVCDTETVS-SDGFLKRLIEYFEEHAE 627
RR+NVA+TR +R C+ D+ET+S FLK + + EE+A+
Sbjct: 665 RRLNVAMTRPKRHLCICGDSETISHGSSFLKHWMNFLEENAD 706
>gi|367019810|ref|XP_003659190.1| hypothetical protein MYCTH_2295898 [Myceliophthora thermophila ATCC
42464]
gi|347006457|gb|AEO53945.1| hypothetical protein MYCTH_2295898 [Myceliophthora thermophila ATCC
42464]
Length = 742
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 254/692 (36%), Positives = 365/692 (52%), Gaps = 118/692 (17%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDV----------------LPAHKFGTHD 93
Q+ G ++NL +TGL G+T+LE LP H D
Sbjct: 42 QRAGVALINLTVASQRTGLGGRTVLELAPHPATASSAGPGSSSSSSSAADLPEHGIRVGD 101
Query: 94 VVVLKPNKADLGSPALG---------------QGVVYRLKDSSITVAFDDIPEEGLNSPL 138
+V++ + G +GVV R+ ++ VA DD E+G
Sbjct: 102 IVLVAEQPSSGGVRKKEAKAASSSSSSERSGVKGVVTRVGKGAVGVAVDDGSEDGGGKED 161
Query: 139 RLE------------KLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
R++ K+A++VT+RRM + +L+K ++ + + VLFG P+ +
Sbjct: 162 RVDALAAGEKKVWIVKVADDVTFRRMNSTMERLAK-MEEREYSAFVRVLFGLSSPSPVPA 220
Query: 187 DIA-------FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR 239
D+ + + L+ SQKDAI AL+SK + ++HGPPGTGKT T++E+ILQ +KR
Sbjct: 221 DLTKDEEVGEIEWIDPTLNDSQKDAIRFALASKEIGLIHGPPGTGKTHTLIELILQLLKR 280
Query: 240 GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLAS 299
+IL C SNI+VDNIVERL PH+V +VRLGHPARLLP VL+ +LD + ++
Sbjct: 281 NLRILVCGPSNISVDNIVERLAPHKVPMVRLGHPARLLPSVLDHSLDVLTRTSEAGAIVK 340
Query: 300 DIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
D+R EM A + KT++ RR I +L+ L KE R+R++ VTD++ + VVL TL G
Sbjct: 341 DVRAEMDAKQASIRKTRNGRERRAIYADLKELRKEYRERERKCVTDLVAGSKVVLATLHG 400
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA----- 414
A +L FD+VIIDEA+QALE CW+ LL + I AGDHLQLPPT++S+ +
Sbjct: 401 AGGFQLRGEQFDVVIIDEASQALEAQCWVPLLAAKKAICAGDHLQLPPTIKSLNSKSKAA 460
Query: 415 -------------------------------EKKGLGRTLFERLADLYGDEVTSMLTVQY 443
+ L TLF+RL L+G + MLT QY
Sbjct: 461 TTTSSSSSRKGKGDAGPAAAAAAAAGAEGVIQGPTLETTLFDRLLKLHGPSIKRMLTTQY 520
Query: 444 RMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLIDIAGCDMEEK 492
RMHE IM + S +LY K+ A P V+ T T L+ ID G D EK
Sbjct: 521 RMHEKIMRFPSDELYEGKLIAADAVKARLLKDLPYEVQDTDDTREPLIFIDTQGGDFLEK 580
Query: 493 KDEE----------------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVV 536
++E DS NE EA + H + L+ +GV DI ++TPY AQ+
Sbjct: 581 NEDEQDAGGGKKLTKSSLYGDSKSNEMEAALVRQHVRSLVDAGVKPEDIAVVTPYNAQLA 640
Query: 537 LLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
+L L+ + +E+ +VDGFQGREKEA+I+S+VRSN EVGFL ++RR+NVA+TR
Sbjct: 641 ILAPLK---ETFPGIELGSVDGFQGREKEAVIVSLVRSNPDGEVGFLGEKRRLNVAMTRP 697
Query: 597 RRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE 627
+R ++ D+ETV FLK +E+ EE+A+
Sbjct: 698 KRSLTVIGDSETVKKGSKFLKDWMEFLEENAD 729
>gi|154311776|ref|XP_001555217.1| hypothetical protein BC1G_06347 [Botryotinia fuckeliana B05.10]
Length = 675
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 258/675 (38%), Positives = 380/675 (56%), Gaps = 83/675 (12%)
Query: 12 AVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGK 71
+V + F + L+D E ++E+S + T + + Q+ G I NL + +TGL GK
Sbjct: 7 SVDIPSFCTTQLHLLDQELQSELSETSTLITGTSPTSLQRAGLAITNLILISQRTGLGGK 66
Query: 72 TLLEF-------------------QSTKGDVLPAHKFGTHDVVVL--KPNKA-------- 102
++E + L H D+V + +P+ +
Sbjct: 67 AVVELGPDPATSSSGSGGKGKGGSGGSGEGELQEHGIRVGDIVAVSEQPSGSAKKREVKE 126
Query: 103 --DLGSPALGQGVVYRLKDSSITVAFDD--IPEEGLNSPLR--LEKLANEVTYRRMKDAL 156
+ GS +GVV ++ S++ VA D+ EE + R + KLAN+VTY+RM +
Sbjct: 127 LEEKGS----RGVVTKVGRSAVWVALDENGKGEEIVGGMKRCWVVKLANDVTYKRMNGTM 182
Query: 157 IQLSKGVQNGPAAGLIPVLFGEQKPTVLKKD---IAFKPFNSNLDHSQKDAISKALSSKN 213
+L K +Q + + VLFG P+ + ++ + + + +L+ SQK AI AL+S
Sbjct: 183 GKLGK-MQEAEYSNFVRVLFGLSSPSPVPENLENVDIEWLDPSLNDSQKHAIKFALASTE 241
Query: 214 VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHP 273
+ ++HGPPGTGKT T++E+ILQ +KR ++L C SNI+VDNIVERL PH+V +VRLGHP
Sbjct: 242 MALIHGPPGTGKTHTLIELILQMLKRNLRVLVCGPSNISVDNIVERLAPHKVPIVRLGHP 301
Query: 274 ARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSK 333
ARLLP V+ +LD + +++ D+RKEM + KTK R+ I +L+ L K
Sbjct: 302 ARLLPSVVNHSLDVLTQTSEAAAIVQDVRKEMDTKQASIKKTKSGKERKAIYGDLKELRK 361
Query: 334 EERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKG 393
E R+R++ V ++ + VVL TL GA +L + FD+VIIDEA+QALE CW+ LL
Sbjct: 362 EFRERERKCVNTLVGGSKVVLATLHGAGGFQLRDEKFDVVIIDEASQALEAQCWVPLLSA 421
Query: 394 SRCILAGDHLQLPPTVQSV---------EAEKKG------LGRTLFERLADLYGDEVTSM 438
S+ +LAGDHLQLPPT++S+ + E +G L TLF+RL L+G + M
Sbjct: 422 SKVVLAGDHLQLPPTIKSLNFKTKTKSQDTETEGIIKGMTLETTLFDRLLKLHGAGIKVM 481
Query: 439 LTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLIDIAGC 487
LT QYRMHE IM + S +LY SK+ A P V+ T T L+ D G
Sbjct: 482 LTTQYRMHEKIMRFPSDELYESKLVAAEAVKARLLTELPYDVEETEDTIEPLIFFDTQGD 541
Query: 488 DMEEKKDEED------------STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQV 535
D EK +EE+ S NE EA + H + L+ +G+ DI ++TPY AQ+
Sbjct: 542 DFPEKSEEENVDKKAGKGMLGESKSNEMEAVLVRRHVQNLVDAGLKPEDIAVVTPYNAQL 601
Query: 536 VLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
L+ RS + +E+ +VDGFQGREKEAII+S+VRSNS++EVGFL ++RR+NVA+TR
Sbjct: 602 ALMS--RSMKEAFPGIELGSVDGFQGREKEAIIVSLVRSNSEREVGFLGEKRRLNVAMTR 659
Query: 596 ARRQCCLVCDTETVS 610
RR ++ D+ETVS
Sbjct: 660 PRRSLTIIGDSETVS 674
>gi|296806473|ref|XP_002844046.1| DNA-binding protein SMUBP-2 [Arthroderma otae CBS 113480]
gi|238845348|gb|EEQ35010.1| DNA-binding protein SMUBP-2 [Arthroderma otae CBS 113480]
Length = 720
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 245/585 (41%), Positives = 341/585 (58%), Gaps = 62/585 (10%)
Query: 111 QGVVYRLKDSSITVAF---------DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSK 161
+GVV R+ + SI AF DD +E L L KLAN+VTYRRM +++L K
Sbjct: 139 EGVVTRVGERSIWAAFGDRGKGKQDDDGVDELWGRKLWLVKLANDVTYRRMNQTMMKLEK 198
Query: 162 GVQNGPAAGLIPVLFGEQKPTVLKKDIA--FKPFNSNLDHSQKDAISKALSSKNVFMLHG 219
++ + LI VLFG P+ L + + + +L+ SQ++A+ AL+S+ + ++HG
Sbjct: 199 -MEESEYSQLIRVLFGHTTPSPLDLESVGPLEFMDPSLNDSQREAVRFALASREIALIHG 257
Query: 220 PPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQ 279
PPGTGKT T++E+I Q V R +IL C SNI+VDNIVERL H+V LVR+GHPARLL
Sbjct: 258 PPGTGKTHTLIELIRQLVLRKKRILVCGPSNISVDNIVERLASHKVPLVRIGHPARLLSS 317
Query: 280 VLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQ 339
VL+ +L+ + +++ D+RKE+ A + KT++ RR I +LR L KE R+R+
Sbjct: 318 VLDHSLEVLSQTSEAAAIVKDVRKEIDAKQASIRKTRNGRERRAIYGDLRELRKEFRERE 377
Query: 340 QLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILA 399
V +++ + VVL TL GA +L N FD+V+IDEA+QA E CWI LL S+ ILA
Sbjct: 378 SKCVDNIVSGSQVVLGTLHGAGGHQLKNQKFDVVLIDEASQAREAQCWIPLLAASKVILA 437
Query: 400 GDHLQLPPTVQSVEAEKKGLGR------------------------TLFERLADLYGDEV 435
GDHLQLPPT++S + K G TLF+RL L+G +
Sbjct: 438 GDHLQLPPTIKSKVSSKPSEGNSVLRDQTDLDTNDLSKLDMRNLEITLFDRLLSLHGPGI 497
Query: 436 TSMLTVQYRMHEHIMNWSSKQLYNSK-----------IKAHPSGVKRTSSTEPTLLLIDI 484
MLT QYRMH+ IM++ S +LY SK +K P V+ T T L+ D
Sbjct: 498 KRMLTTQYRMHQMIMDFPSHELYESKLIAAGAVKERLLKDLPYEVEETDDTREPLIFYDT 557
Query: 485 AGCDMEEKKDEE----------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ 534
G D EK + +S N+ EA V H ++L+ +GV DI +ITPY AQ
Sbjct: 558 QGGDFPEKSPDSTGILAKSVLVESKCNDMEAAVVARHVEKLVSAGVRPDDIAVITPYNAQ 617
Query: 535 VVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
V LL L +K +E+ +VDGFQGREKEA+++S+VRSN EVGFL ++RR+NVA+T
Sbjct: 618 VALLSQLLK--EKFPTLELGSVDGFQGREKEAVVVSLVRSNLDHEVGFLGEKRRLNVAMT 675
Query: 595 RARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE--YLSGSEYLN 636
R RR C+ D+ TVSS FLKR + + EE+A+ Y SE+ N
Sbjct: 676 RPRRHLCVCGDSVTVSSGSPFLKRWLAFLEENADLRYPDLSEFPN 720
>gi|393244587|gb|EJD52099.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 714
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 266/710 (37%), Positives = 383/710 (53%), Gaps = 100/710 (14%)
Query: 12 AVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGK 71
+ ++ F++ L+ E++A + S +S + + +G +LNL V+ + GL GK
Sbjct: 4 STAVTAFLARQRKLLQAERDAVVEQSTLLISSCSPKLLESRGLALLNLGVVNVRVGLGGK 63
Query: 72 TLLEFQ----STKGDVLPAHKFGTHDVVVL---------KPN----KADLGSPALGQGVV 114
TL+E + + V P H F D+ + KP+ K + +GV+
Sbjct: 64 TLVELERPAAHSSSSVFPPHTFRPGDIARIDEHTSSATAKPSAKVKKTESKDAKDIEGVI 123
Query: 115 YRLKDSSITVAFDDIPEEG-------LNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGP 167
Y++ D+ I VA D EG L S +L K+AN T+ RM A+ L K +Q
Sbjct: 124 YKVSDTKIIVAVDG---EGSGSQELELPSRCKLVKIANTATFDRMDRAIDTLEKHMQGTA 180
Query: 168 A------AGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPP 221
A A LI VL +Q P+ + ++L+ SQ+ A+ AL + V +HGPP
Sbjct: 181 AVSSFNNANLIRVLMNQQPPSAPVPMTDLQYLEASLNSSQQQAVKFALEAAEVACIHGPP 240
Query: 222 GTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVL 281
GTGKT T+VEI+ Q V R +L C ASN+AVDN++ERLVPHR+ L R+GHPAR++ +
Sbjct: 241 GTGKTHTLVEIVRQLVARNKSVLVCGASNLAVDNLLERLVPHRIPLTRIGHPARVMEALH 300
Query: 282 ESALDAQVLRGDNSSLASDIRKEMKALNGKLL-KTKDK---NTRREIQKELRTLSKEERK 337
+ LDAQ +R + +LA+D++K++ A G L K K K R+++ E+R L KE RK
Sbjct: 301 AATLDAQTVRSEQYALANDVKKDIDAAMGALTGKGKGKLRGPERKKMWGEIRELRKEYRK 360
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCI 397
R+ V+ V+K A VVL T GA R+L + FD+VIIDEA QALE W+ + KG++ I
Sbjct: 361 REGTVVSSVVKQAKVVLATCHGAGGRQLYDRLFDVVIIDEATQALEAVSWVPIFKGAKLI 420
Query: 398 LAGDHLQLPPTVQS---------------------------------VEAEKKGLGRTLF 424
LAGD QLPPTV S V + L TLF
Sbjct: 421 LAGDPCQLPPTVISTNQKKAKTKKTEAKPPAPAKKDNKKKGAKTGNGVLKPPRSLEVTLF 480
Query: 425 ERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS---------------GV 469
+RL +YG + MLTVQYRMH I + SK LY + + +H S G
Sbjct: 481 DRLERMYGPSIKRMLTVQYRMHAQIAQFPSKTLYGNALVSHDSVKAHRLRDLPAAQDKGD 540
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKD----------EEDSTMNEGEAEVAMAHAKRLIQSG 519
+ + E ++ D AGC+ E+ + EE S NE EA V +RL++ G
Sbjct: 541 EHSDVLETPVVFFDTAGCEYFERLEGDGQDGAKGIEEGSRCNENEAVVVKNWVERLVEGG 600
Query: 520 VHASDIGIITPYAAQVVLLK-ILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK 578
V S I IITPY AQV LL +LR + ++E+ +VDG QGREKEA+++S+VRSN K+
Sbjct: 601 VSPSQIAIITPYQAQVTLLSSLLRPS---MPDLEIGSVDGMQGREKEAVVLSLVRSNDKR 657
Query: 579 EVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE 627
EVGFL D+RR+NVA+TRARR C+V D+ T+ G +LK + + E +A+
Sbjct: 658 EVGFLKDKRRLNVAMTRARRHLCVVGDSSTIQHGGKYLKNWMAWLEANAD 707
>gi|326471889|gb|EGD95898.1| DNA helicase [Trichophyton tonsurans CBS 112818]
Length = 716
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 244/584 (41%), Positives = 343/584 (58%), Gaps = 63/584 (10%)
Query: 111 QGVVYRLKDSSITVAFDD-----IPEEGLNS----PLRLEKLANEVTYRRMKDALIQLSK 161
+GVV R+ + SI AF D E+G++ L L KLAN+VTYRRM + +L K
Sbjct: 134 EGVVTRVGERSIWAAFGDRGKGKQDEDGVDELWGRKLWLVKLANDVTYRRMNQTMAKLEK 193
Query: 162 GVQNGPAAGLIPVLFGEQKPTVLKKDIA--FKPFNSNLDHSQKDAISKALSSKNVFMLHG 219
+Q + LI VLFG P+ L + + + +L+ SQK+AI AL+S+ + ++HG
Sbjct: 194 -LQESEHSQLIRVLFGHTAPSPLDFESVGPLEFMDPSLNDSQKEAIRFALASREIALIHG 252
Query: 220 PPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQ 279
PPGTGKT T++E+I Q V+R ++L C SNI+VDNIVERL H+V LVR+GHPARLL
Sbjct: 253 PPGTGKTHTLIELIRQLVQRKKRVLVCGPSNISVDNIVERLALHKVPLVRIGHPARLLSS 312
Query: 280 VLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQ 339
VL+ +L+ + +++ D+RKE+ + + KT++ RR I +L+ L KE R+R+
Sbjct: 313 VLDHSLEVLSQTSEAAAIVKDVRKEIDSKQASIRKTRNGRERRAIYGDLKELRKEFRERE 372
Query: 340 QLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILA 399
V +++ + VVL TL GA +L N FD+V+IDEA+QA E CWI LL SR +LA
Sbjct: 373 SKCVDNIVSGSQVVLGTLHGAGGHQLKNQKFDVVLIDEASQAREAQCWIPLLPASRVVLA 432
Query: 400 GDHLQLPPTVQSVEA-------------------------EKKGLGRTLFERLADLYGDE 434
GDHLQLPPT++S + + + L TLF+RL L+G
Sbjct: 433 GDHLQLPPTIKSKSSSNSDQTNSALWDKEDLRFNELSNTFDMRNLEITLFDRLLSLHGTG 492
Query: 435 VTSMLTVQYRMHEHIMNWSSKQLYNSK-----------IKAHPSGVKRTSSTEPTLLLID 483
+ MLT QYRMH+ IM++ S +LY SK +K P V+ T T L+ D
Sbjct: 493 IKRMLTTQYRMHQKIMDFPSDELYESKLISADAVRERLLKDLPYEVEDTDDTREPLVFYD 552
Query: 484 IAGCDMEEKKDEED----------STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAA 533
G D EK + + S N+ EA V H + L+ +GV DI +ITPY A
Sbjct: 553 TQGGDFPEKSPDSNGISAKSLLVESKCNDMEAAVVARHVENLVSAGVRPEDIAVITPYNA 612
Query: 534 QVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAV 593
QV LL L +K +E+ +VDGFQGREKEA+++S+VRSN EVGFL ++RR+NVA+
Sbjct: 613 QVALLSQLLK--EKFPTLELGSVDGFQGREKEAVVVSLVRSNQDHEVGFLGEKRRLNVAM 670
Query: 594 TRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE--YLSGSEY 634
TR RR C+ D+ETVSS FLKR + + EE+A+ Y SE+
Sbjct: 671 TRPRRHLCICGDSETVSSGSPFLKRWMAFLEENADLRYPDISEF 714
>gi|326477246|gb|EGE01256.1| DNA-binding protein SMUBP-2 [Trichophyton equinum CBS 127.97]
Length = 716
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 244/584 (41%), Positives = 343/584 (58%), Gaps = 63/584 (10%)
Query: 111 QGVVYRLKDSSITVAFDD-----IPEEGLNS----PLRLEKLANEVTYRRMKDALIQLSK 161
+GVV R+ + SI AF D E+G++ L L KLAN+VTYRRM + +L K
Sbjct: 134 EGVVTRVGERSIWAAFGDRGKGKQDEDGVDELWGRKLWLVKLANDVTYRRMNQTMAKLEK 193
Query: 162 GVQNGPAAGLIPVLFGEQKPTVLKKDIA--FKPFNSNLDHSQKDAISKALSSKNVFMLHG 219
+Q + LI VLFG P+ L + + + +L+ SQK+AI AL+S+ + ++HG
Sbjct: 194 -LQESEHSQLIRVLFGHTAPSPLDFESVGPLEFMDPSLNDSQKEAIRFALASREIALIHG 252
Query: 220 PPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQ 279
PPGTGKT T++E+I Q V+R ++L C SNI+VDNIVERL H+V LVR+GHPARLL
Sbjct: 253 PPGTGKTHTLIELIRQLVQRKKRVLVCGPSNISVDNIVERLALHKVPLVRIGHPARLLSS 312
Query: 280 VLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQ 339
VL+ +L+ + +++ D+RKE+ + + KT++ RR I +L+ L KE R+R+
Sbjct: 313 VLDHSLEVLSQTSEAAAIVKDVRKEIDSKQASIRKTRNGRERRAIYGDLKELRKEFRERE 372
Query: 340 QLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILA 399
V +++ + VVL TL GA +L N FD+V+IDEA+QA E CWI LL SR +LA
Sbjct: 373 SKCVDNIVSGSQVVLGTLHGAGGHQLKNQKFDVVLIDEASQAREAQCWIPLLPASRVVLA 432
Query: 400 GDHLQLPPTVQSVEA-------------------------EKKGLGRTLFERLADLYGDE 434
GDHLQLPPT++S + + + L TLF+RL L+G
Sbjct: 433 GDHLQLPPTIKSKSSSNSDQTNSALWDKEDLRFNELSNTFDMRNLEITLFDRLLSLHGTG 492
Query: 435 VTSMLTVQYRMHEHIMNWSSKQLYNSK-----------IKAHPSGVKRTSSTEPTLLLID 483
+ MLT QYRMH+ IM++ S +LY SK +K P V+ T T L+ D
Sbjct: 493 IKRMLTTQYRMHQKIMDFPSDELYESKLIAADAVRERLLKDLPYEVEDTDDTREPLVFYD 552
Query: 484 IAGCDMEEKKDEED----------STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAA 533
G D EK + + S N+ EA V H + L+ +GV DI +ITPY A
Sbjct: 553 TQGGDFPEKSPDSNGISAKSPLVESKCNDMEAAVVARHVENLVSAGVRPEDIAVITPYNA 612
Query: 534 QVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAV 593
QV LL L +K +E+ +VDGFQGREKEA+++S+VRSN EVGFL ++RR+NVA+
Sbjct: 613 QVALLSQLLK--EKFPTLELGSVDGFQGREKEAVVVSLVRSNQDHEVGFLGEKRRLNVAM 670
Query: 594 TRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE--YLSGSEY 634
TR RR C+ D+ETVSS FLKR + + EE+A+ Y SE+
Sbjct: 671 TRPRRHLCICGDSETVSSGSPFLKRWMAFLEENADLRYPDISEF 714
>gi|429849984|gb|ELA25306.1| DNA-binding protein smubp-2 [Colletotrichum gloeosporioides Nara
gc5]
Length = 665
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 256/665 (38%), Positives = 381/665 (57%), Gaps = 69/665 (10%)
Query: 9 KQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGL 68
K +S+Q F + L+ E AEI+ S + + Q+ G + NL +TGL
Sbjct: 4 KAEPLSVQSFAATQLSLLSAELAAEIAESSALVSLHSPTALQRAGLALSNLVVGARRTGL 63
Query: 69 MGKTLLEFQ------STKGDVLPAHKFGTHDVVVLKPNKA---------DLGSPALGQGV 113
G+T+LE S+ LP H D+V+L A +L S +GV
Sbjct: 64 GGRTVLELNPDPAVSSSAEGKLPEHGLRPGDIVLLSEQPAGNAKKREVKELESKG-ARGV 122
Query: 114 VYRLKDSSITVAFDDIP--EEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGL 171
V R++ S+ +A D+ E + + + K+A++VTYRRM + +L K + +
Sbjct: 123 VTRVRHESVGIAVDEGKGEEREFDGRVWVVKVADDVTYRRMNLTMEKLEK-MTEAEYSSF 181
Query: 172 IPVLFGEQKPTVLKKDIA-------FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTG 224
+ VLFG P+ + D+A + + +L+ SQKDAI AL+S+ V ++HGPPGTG
Sbjct: 182 MRVLFGLSSPSPVPSDLASDSELSKIQWIDPSLNDSQKDAIRFALASREVALIHGPPGTG 241
Query: 225 KTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESA 284
KT T++E+ILQ +K +IL C SNI+VDNIVERL PH++ ++RLGHPARLLP V+ +
Sbjct: 242 KTHTLIELILQMLKLDLRILVCGPSNISVDNIVERLSPHKIPILRLGHPARLLPSVVAHS 301
Query: 285 LDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVT 344
LD + ++ D+R EM A + KT++ RR+I +L+ L KE R+R++ V+
Sbjct: 302 LDVLTQTSEAGAIVKDVRAEMDAKQASIKKTRNGRERRQIYGDLKELRKEFRERERRCVS 361
Query: 345 DVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQ 404
++++ + VVL TL GA +L + FD+VIIDEA+QALE CW+ LL + + AGDHLQ
Sbjct: 362 NLVRESKVVLATLHGAGGHQLRDQQFDVVIIDEASQALEAQCWVPLLSAKKAVCAGDHLQ 421
Query: 405 LPPTVQSV-------------EAEKKG--LGRTLFERLADLYGDEVTSMLTVQYRMHEHI 449
LPPT++S+ E + KG L TLF+RL L+G + MLT QYRMHE I
Sbjct: 422 LPPTIKSLNSKVKKVLVEGAGEKQIKGMTLETTLFDRLLALHGSSIKRMLTTQYRMHEKI 481
Query: 450 MNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLIDIAGCDMEEKKDEED- 497
M + S +LY+ ++ A P V+ T T L+ ID G D EK +++D
Sbjct: 482 MRFPSDELYDGRLIAAEAVKERLLKDLPYEVQDTEDTNEPLIFIDTQGGDYPEKSEDDDK 541
Query: 498 -------------STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSK 544
S NE EA + HA+ L+ +GV DI ++TPY AQ+ +L L+
Sbjct: 542 DAVKKAKFSLHGESKSNEMEAALVRQHAQSLVDAGVKPEDIAVVTPYNAQLAILAPLK-- 599
Query: 545 DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
++ +E+ +VDGFQGREKEA+I+S+VRSNS+ EVGFL ++RR+NVA+TR +R ++
Sbjct: 600 -EQFPGIELGSVDGFQGREKEAVIVSLVRSNSEGEVGFLGEKRRLNVAMTRPKRSLTVIG 658
Query: 605 DTETV 609
D+ETV
Sbjct: 659 DSETV 663
>gi|452987618|gb|EME87373.1| hypothetical protein MYCFIDRAFT_26275 [Pseudocercospora fijiensis
CIRAD86]
Length = 694
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 266/684 (38%), Positives = 395/684 (57%), Gaps = 85/684 (12%)
Query: 18 FVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQ 77
F + L+D E++AE++ + ++ T Q+ G +LNL +TG GKTLLE
Sbjct: 9 FAASQLSLLDNERDAEVAETQLLTSTHAPTTLQRAGLALLNLAVSSQRTGFGGKTLLELS 68
Query: 78 ----STKGDVLPAHKFGTHDVVVL---------KPNKADLGSPALGQGVVYRLKDSSITV 124
+ LP H D+ + K + +L + +GVV + ++ITV
Sbjct: 69 LDPAISSSPELPEHGLRVGDICAVAEQPKGAEKKKERENLEKKGV-EGVVTKTHTTTITV 127
Query: 125 AFD----DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQK 180
A D D+P L L KLAN+VTY+R+ + +L K +Q + L VLFG
Sbjct: 128 ALDKEDADLP----TGKLWLVKLANDVTYKRLNQTMSRLQK-MQPSEHSTLTQVLFGRSS 182
Query: 181 PTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQ 235
PT LK +I + + L+ SQK+AI AL+S+ V ++HGPPGTGKT T++E+ILQ
Sbjct: 183 PTAVSDSDLKAEIQWS--DPTLNDSQKEAIQFALASQEVVLIHGPPGTGKTHTLIELILQ 240
Query: 236 EVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNS 295
+K+ ++L C SNI+VDNI+ERL PH+V +VRLGHPARLLP V+ +++ D +
Sbjct: 241 LLKQKLRLLVCGPSNISVDNIIERLAPHKVSMVRLGHPARLLPSVINHSMEVLTNTSDAA 300
Query: 296 SLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLT 355
++ +DIR EM + + KT++ R+ I EL+ L KE R+R+ V ++++ + VVL+
Sbjct: 301 AIVTDIRSEMDSKQASIRKTRNGRERKAIYGELKDLRKEYREREGRVVRELLQQSQVVLS 360
Query: 356 TLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLK--GSRCILAGDHLQLPPTVQSVE 413
TL G+ +L + FD+VI+DEA+QALE CWI +L S+ +LAGDHLQLPPT++S
Sbjct: 361 TLHGSGGFQLKDQEFDVVIVDEASQALEAQCWIPVLTSGASKLVLAGDHLQLPPTIKSSN 420
Query: 414 A-------------EKKGLG-------------RTLFERLADLYGDEVTSMLTVQYRMHE 447
+ ++K G TLF+RL L+G+++ MLT QYRMHE
Sbjct: 421 SKDTTKALAKASLTDQKSTGGAAKAKDDDVHLETTLFDRLLKLHGNKIKRMLTTQYRMHE 480
Query: 448 HIMNWSSKQLYNSK-----------IKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEE 496
IM + S LY K +K P GV +T L+ D G D EK + E
Sbjct: 481 KIMQFPSHALYGDKLIAADAVKSRLLKDLPYGVAGNDNTIEPLIFFDTQGGDFPEKTEAE 540
Query: 497 D-----------STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL-KILRSK 544
D S +NE EA + H L+ SGV A DI ++TPY Q+ LL ++L+
Sbjct: 541 DTVKGKSSLLAESKVNEAEALIVREHIINLVNSGVKADDIAVVTPYNGQLALLSQMLK-- 598
Query: 545 DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
+++ +E+ +VDGFQGREKEA+I+S+VRSN++ EVGFLS++RR+NVA+TR +RQ C++
Sbjct: 599 -EQVPGLELGSVDGFQGREKEAVIVSLVRSNAEHEVGFLSEKRRLNVAMTRPKRQLCVIG 657
Query: 605 DTETVSSDG-FLKRLIEYFEEHAE 627
D+ET+SS FLK + + EE+A+
Sbjct: 658 DSETISSGSKFLKSWMAHLEENAD 681
>gi|389641863|ref|XP_003718564.1| DNA helicase [Magnaporthe oryzae 70-15]
gi|351641117|gb|EHA48980.1| DNA helicase [Magnaporthe oryzae 70-15]
Length = 713
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 259/665 (38%), Positives = 367/665 (55%), Gaps = 92/665 (13%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEFQS---TKGDVLPAHKFGTHDVVVLKPNKADLGS 106
Q+ G+ + NL +TG G+T++E S G LP H DVV++ A GS
Sbjct: 42 QRAGAALTNLTVQGRRTGAGGRTVVELSSDPAVGGIELPEHGLRVGDVVLVAEQPA--GS 99
Query: 107 PA----------LGQGVVYRLKDSSITVAFD---------DIPEEGLNSPLRLEKLANEV 147
+GVV R++ S + VA D E+GL + + +LA++V
Sbjct: 100 AKKREVREMERNGVRGVVTRVRRSDLNVALDAGDDKSGGAGKEEKGLAGRVWVVRLADDV 159
Query: 148 TYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKP-------FNSNLDHS 200
TYRRM + ++ + + + + I VLFG P+ + ++ P + L+ S
Sbjct: 160 TYRRMTWTMEKMER-MADAEHSNFIRVLFGHSSPSPVPSNLKTDPEFGELEWLDPTLNDS 218
Query: 201 QKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERL 260
QKDAI AL+SK + ++HGPPGTGKT T++E+ILQ +K+G +IL C SNI+VDNIVERL
Sbjct: 219 QKDAIRFALASKEIALIHGPPGTGKTHTLIELILQMLKQGLRILVCGPSNISVDNIVERL 278
Query: 261 VPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNT 320
PH+V +VRLGHPARLLP V+ +LD + ++ D+R EM A + KTK
Sbjct: 279 APHKVPIVRLGHPARLLPSVVGHSLDVLTQTSEAGAIVRDVRAEMDAKQASIKKTKSGRE 338
Query: 321 RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQ 380
R+ I EL L KE R R++ V ++++++ VVL TL G+ +L FD+VIIDEA+Q
Sbjct: 339 RKAIYGELHELRKEFRDREKRCVANLLQSSKVVLATLHGSGGFQLRQEKFDVVIIDEASQ 398
Query: 381 ALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA-------------------------- 414
ALE CW+ALL + +LAGDHLQLPPT++S+ +
Sbjct: 399 ALEAQCWVALLSAKKAVLAGDHLQLPPTIKSLNSKAAKTATGGDGSGTADGEESSAGQSR 458
Query: 415 EKKG--LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH------- 465
+KKG L TLF+RL DL+G + MLT QYRMHE IM + S +LY ++ A
Sbjct: 459 KKKGVTLETTLFDRLLDLHGPAIKRMLTTQYRMHEKIMRFPSDELYGGRLVAAEAVKERL 518
Query: 466 ----PSGVKRTSSTEPTLLLIDIAGCDMEEKKDEED------------------STMNEG 503
P V+ T T L+ ID G D E+ DE D S NE
Sbjct: 519 LKDLPYKVEDTDDTSEPLIFIDTQGGDFPERNDEMDNGDADDKKKTKRMLLHGESKSNEM 578
Query: 504 EAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGRE 563
EA + H + L+ +GV DI ITPY AQ+ +L L D+ +E+ +VDGFQGRE
Sbjct: 579 EAALVAQHVRSLVDAGVKPEDIACITPYNAQLAVLAPLLK--DRFPGIELGSVDGFQGRE 636
Query: 564 KEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS-SDGFLKRLIEYF 622
KEA+++S+ RSN EVGFL +RRR+NVA+TR +R ++ D+ETV FLK +E+
Sbjct: 637 KEAVVVSLCRSNPDGEVGFLGERRRLNVAMTRPKRSLTVIGDSETVKRGSKFLKGWMEHL 696
Query: 623 EEHAE 627
EE+A+
Sbjct: 697 EENAD 701
>gi|85090568|ref|XP_958479.1| hypothetical protein NCU07395 [Neurospora crassa OR74A]
gi|28919845|gb|EAA29243.1| hypothetical protein NCU07395 [Neurospora crassa OR74A]
Length = 716
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 266/701 (37%), Positives = 375/701 (53%), Gaps = 90/701 (12%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
V + F S L+ E AEI+ + Q+ G + NL +TG GKT
Sbjct: 7 VDIPSFASTQLTLLSSELAAEIAENSELIGLHTPTALQRAGLALTNLVVNAQRTGYGGKT 66
Query: 73 LLEFQSTKGDV----------------------LPAHKFGTHDVVVLKPNKA-------- 102
+LE V LP H T D+VV+ A
Sbjct: 67 VLELGPDSATVTITSSSSSSSSGQKGGGYDGPELPEHGIRTGDIVVVSEQPAGSAKKREV 126
Query: 103 -DLGSPALGQGVVYRLKDSSITVAFDDIPEEGL--------NSPLRLEKLANEVTYRRMK 153
+L V + +D EE + + + + KLA++VTYRRM
Sbjct: 127 RELEKKGAKGVVTRVGRGVVGVALDEDKGEENVVGTGGLGGSGRVWMVKLADDVTYRRMN 186
Query: 154 DALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDH-------SQKDAIS 206
+ +L K + + I VLFG+ P+ + D+ P N+D SQKDAI
Sbjct: 187 GTMEKLQK-MSESEHSMFIRVLFGQSSPSPVPADLTNDPEVGNIDWVDPTLNDSQKDAIR 245
Query: 207 KALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVR 266
AL+S+ + ++HGPPGTGKT T++E+ILQ ++R +IL C SNI+VDNIVERL PH++
Sbjct: 246 FALASREIALIHGPPGTGKTHTLIELILQLLRRDLRILVCGPSNISVDNIVERLSPHKLP 305
Query: 267 LVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQK 326
++RLGHPARLLP VL +LD D ++ D+R EM A + KT++ RR I
Sbjct: 306 ILRLGHPARLLPSVLSHSLDILTTTSDAGAIVKDVRAEMDAKQASIRKTRNGRERRAIYA 365
Query: 327 ELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIAC 386
EL+ L KE R+R++ V+D++ + VVL TL GA +L N FD+VIIDEA+QALE C
Sbjct: 366 ELKELRKEYRERERRCVSDLVGRSKVVLATLHGAGGYQLKNEEFDVVIIDEASQALEAQC 425
Query: 387 WIALLKGSRCILAGDHLQLPPTVQSVEA---------EKKGLGRTLFERLADLYGDEVTS 437
W+ LL + +LAGDHLQLPPT++S+ + E + L TLF+RL L+G +
Sbjct: 426 WVPLLWAKKAVLAGDHLQLPPTIKSLNSRAATTKEKKEGQTLETTLFDRLLTLHGPSIKR 485
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAHP------------SGVKRTSSTEPTLLLIDIA 485
MLT QYRMHE IM + S +LY SK+ A GV+ T L+ ID
Sbjct: 486 MLTTQYRMHEKIMRFPSDELYESKLVAAEHVRERLLKDLPYEGVEANDDTTEPLIFIDTQ 545
Query: 486 GCDMEEKKDEE------------------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGI 527
G D EK +EE +S NE EA + H + LI++GV DI +
Sbjct: 546 GGDFPEKNEEELDGNGSTDKKKVIRSLHGESKSNEMEAALVRQHVRGLIKAGVRPDDIAV 605
Query: 528 ITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
+TPY AQ+ +L L+ D+ +E+ +VDGFQGREKEA+I+S+VRSN + EVGFL ++R
Sbjct: 606 VTPYNAQLSILAPLK---DEFPGIELGSVDGFQGREKEAVIVSLVRSNDEGEVGFLGEKR 662
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE 627
R+NVA+TR +R ++ D+ETV FLKR +E+ EE+A+
Sbjct: 663 RLNVAMTRPKRSLTVIGDSETVKKGSTFLKRWMEFLEENAD 703
>gi|451998180|gb|EMD90645.1| hypothetical protein COCHEDRAFT_1140294 [Cochliobolus
heterostrophus C5]
Length = 709
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 267/696 (38%), Positives = 387/696 (55%), Gaps = 94/696 (13%)
Query: 18 FVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQ 77
F S L+ E EAE+S + S + G ILNL +TGL GKT+LE
Sbjct: 10 FASRQLTLLSAELEAELSETNELLTSHTPSALARAGLAILNLNITSIRTGLGGKTVLELG 69
Query: 78 STKGDV-------LPAHKFGTHDVVVL------------KPNKADLGSPALGQGVVYRLK 118
V +P H D+V + K A GS +GVV R++
Sbjct: 70 LDSAVVNKGAAPDIPEHGIRVGDIVAVQEQVGASAKKGEKREAAKRGS----EGVVLRVR 125
Query: 119 DSSITVAFDDIPEEGLNSPLRLE--KLANEVTYRRMKDALIQLSK-GVQNGPAAGLIPVL 175
++ V + ++ +N+ RL KLAN+VTY+RM + +L K G Q+ + + VL
Sbjct: 126 RENVEVVLEKEEDDDVNAGSRLWIVKLANDVTYKRMNQTMSRLQKLGDQD--YSPFMRVL 183
Query: 176 FGEQKPTVLKKDI--------AFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTT 227
FG+ P+ L D+ + + +L+ SQK+AI AL+S+ V ++HGPPGTGKT
Sbjct: 184 FGQASPSPLPTDLNDPSNPLHKLEWIDPSLNDSQKEAIRFALASREVALIHGPPGTGKTH 243
Query: 228 TVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDA 287
T++E+ILQ +K+ ++L C SNI+VDNIVERL H+V +VRLGHPARLLP VL +LD
Sbjct: 244 TLIELILQLLKQKLRLLVCGPSNISVDNIVERLASHKVPMVRLGHPARLLPSVLSHSLDV 303
Query: 288 QVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVI 347
+ ++L D+RKEM + KT++ RR+I EL+ L +E R+R++ V++++
Sbjct: 304 LTRTSEAAALVEDVRKEMDEKQASIRKTRNAKERRQIYTELKELRQEFREREKGCVSNLV 363
Query: 348 KNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL--KGSRCILAGDHLQL 405
+ VVL TL GA L FD+VI+DEA+QALE CW+ LL K ++ +LAGDHLQL
Sbjct: 364 TGSKVVLATLHGAGGFHLKGQEFDVVIVDEASQALEAQCWVPLLWTKTNKLVLAGDHLQL 423
Query: 406 PPTVQSVEAE-------------------------KKGLG----RTLFERLADLYGDEVT 436
PPT++S+ ++ K+G G TLF+RL L+G +
Sbjct: 424 PPTIKSLNSKEAKTAKKSKDKKTKGAEDNADRSMLKQGEGITLETTLFDRLLALHGPSIK 483
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLIDIA 485
MLT QYRMHE IM + S +LY+SK+ A V+ T T L+ D
Sbjct: 484 RMLTTQYRMHEKIMRFPSDELYDSKLVAADFVKARLLKDLKYEVQETEDTTEPLVFWDTQ 543
Query: 486 GCDMEEKKDEE-------------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYA 532
G D EK ++E DS NE EA + H + L+ +GV DI ++TPY
Sbjct: 544 GGDFPEKVEDEGVIGKGGKGMSLGDSKSNEAEAALVRMHVRSLVGAGVRPEDIAVVTPYN 603
Query: 533 AQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVA 592
AQ+ LL + ++ ME+ +VDGFQGREKEA+I S VRSN++ EVGFL ++RR+NVA
Sbjct: 604 AQLALLAGMLK--EEYPGMELGSVDGFQGREKEAVIFSTVRSNAEHEVGFLGEKRRLNVA 661
Query: 593 VTRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE 627
+TR +R C++ D+ET+S FLK +++ E+HA+
Sbjct: 662 MTRPKRHLCVIGDSETISKGSKFLKAWMQHLEDHAD 697
>gi|119191656|ref|XP_001246434.1| hypothetical protein CIMG_00205 [Coccidioides immitis RS]
Length = 708
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 256/674 (37%), Positives = 372/674 (55%), Gaps = 104/674 (15%)
Query: 35 SASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF------QSTKG------- 81
S S S A+R Q G + L V+ +TG+ G+ + EF +S KG
Sbjct: 40 SLSFVSPATRR--ALQAAGHALTALVLVNCRTGMGGREVGEFGVDAALKSAKGKKTGEGA 97
Query: 82 ----------DVLPAHKFGTHDVVVLKP------------------NKADLGSPALGQGV 113
+ LPAH DVV ++P K D +GV
Sbjct: 98 LPTGNGDGARESLPAHGIRVGDVVRVEPIVSGARGGSGSKAGKGKVGKDDADVTKGLEGV 157
Query: 114 VYRLKDSSITVAFDDIPEEG----------LNSPLRLEKLANEVTYRRMKDALIQLSKGV 163
V ++ + S+ VAFD+ G L L KLAN++TYRRMK ++++ K
Sbjct: 158 VTKIGERSVWVAFDERGRPGKQDDDGAAGLWGQKLWLVKLANDITYRRMKQTMVRMEKMA 217
Query: 164 QNGPAAGLIPVLFGEQKPTVLKKDIA--FKPFNSNLDHSQKDAISKALSSKNVFMLHGPP 221
++ + + VLFG P+ A + +L+ SQK+AI AL+S+ + ++HGPP
Sbjct: 218 ES-EHSSFMRVLFGHTTPSPPDWSSASSLDFIDPSLNDSQKEAIRFALASREIALIHGPP 276
Query: 222 GTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVL 281
GTGKT T++E+ILQ ++R +IL C SNI+VDNIVERL PH++ LVR+GHPARLL V+
Sbjct: 277 GTGKTHTLIELILQLLRRNLRILVCGPSNISVDNIVERLAPHKIPLVRIGHPARLLSSVV 336
Query: 282 ESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQL 341
+ +L+A D +++ D+R+E+ + KT+ RREI K+L+ L KE R+R+
Sbjct: 337 DHSLEALTQTSDAAAIVKDVRREIDEKQASIRKTRSGRERREIYKDLKELRKEFREREAR 396
Query: 342 AVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGD 401
V ++ + VVL TL GA +L N FD+V+IDEA+QALE CW+ LL S+ ILAGD
Sbjct: 397 CVDHLVTESKVVLATLHGAGGHQLKNQKFDVVLIDEASQALEAQCWVPLLSASKAILAGD 456
Query: 402 HLQLPPTVQSV---------------EAEKKG-------------LGRTLFERLADLYGD 433
HLQLPPT++S A + G L TLF+RL L+G
Sbjct: 457 HLQLPPTIKSTTTNTPSGSSRKLKSSNAIQSGADDLTISSLSITSLETTLFDRLLSLHGP 516
Query: 434 EVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLI 482
+ MLT QYRMHE IM++ S +LY SK+ A P ++ T T L+
Sbjct: 517 TIKRMLTTQYRMHEKIMSFPSCELYESKLIAADHVKARLLKDLPCDIQDTDDTCEPLVFY 576
Query: 483 DIAGCDMEEKKDE-----EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVL 537
D G + E+ ++ DS N+ EA V H + LI +G+ DI +ITPY AQV L
Sbjct: 577 DTQGGEFPERIEDGELLLADSKSNDLEAAVVARHVQNLIAAGLREEDIAVITPYNAQVAL 636
Query: 538 L-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
L ++LR ++ +E+ +VDGFQGREKEA+++S+VRSN+++EVGFL ++RR+NVA+TR
Sbjct: 637 LAQLLR---ERHPGLEIGSVDGFQGREKEAVVVSLVRSNAEREVGFLGEKRRLNVAMTRP 693
Query: 597 RRQCCLVCDTETVS 610
R+ C+ D+ET+S
Sbjct: 694 RKHLCVCGDSETIS 707
>gi|327304821|ref|XP_003237102.1| DNA helicase [Trichophyton rubrum CBS 118892]
gi|326460100|gb|EGD85553.1| DNA helicase [Trichophyton rubrum CBS 118892]
Length = 717
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 244/587 (41%), Positives = 343/587 (58%), Gaps = 64/587 (10%)
Query: 111 QGVVYRLKDSSITVAFDD-----IPEEGLNS----PLRLEKLANEVTYRRMKDALIQLSK 161
+GVV R+ + SI AF D E+G++ L L KLAN+VTYRRM + +L K
Sbjct: 134 EGVVTRVGERSIWAAFGDRGKGKQDEDGVDELWGRKLWLVKLANDVTYRRMNQTMAKLEK 193
Query: 162 GVQNGPAAGLIPVLFGEQKPTVLKKDIA--FKPFNSNLDHSQKDAISKALSSKNVFMLHG 219
+Q + LI VLFG P L + + + +L+ SQK+AI AL+S+ + ++HG
Sbjct: 194 -LQESEHSQLIRVLFGHTTPLPLDFESVGPLEFMDPSLNDSQKEAIRFALASREIALIHG 252
Query: 220 PPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQ 279
PPGTGKT T++E+I Q V+R ++L C SNI+VDNIVERL H+V LVR+GHPARLL
Sbjct: 253 PPGTGKTHTLIELIRQLVQRKKRVLVCGPSNISVDNIVERLASHKVPLVRVGHPARLLSS 312
Query: 280 VLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQ 339
VL+ +L+ + +++ D+RKE+ + + KT++ RR I +L+ L KE R+R+
Sbjct: 313 VLDHSLEVLSQTSEAAAIVKDVRKEIDSKQASIRKTRNGRERRAIYGDLKELRKEFRERE 372
Query: 340 QLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILA 399
V +++ + VVL TL GA +L N FD+V+IDEA+QA E CWI LL SR +LA
Sbjct: 373 SKCVDNIVSGSQVVLGTLHGAGGHQLKNQKFDVVLIDEASQAREAQCWIPLLPASRVVLA 432
Query: 400 GDHLQLPPTVQSVEA--------------------------EKKGLGRTLFERLADLYGD 433
GDHLQLPPT++S + + + L TLF+RL L+G
Sbjct: 433 GDHLQLPPTIKSKSSSNLYQINSALWDKKEDLHFNELSNTFDMRNLEITLFDRLLSLHGT 492
Query: 434 EVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS-----------GVKRTSSTEPTLLLI 482
+ MLT QYRMH+ IM++ S +LY SK+ A + V+ T T L+
Sbjct: 493 GIKRMLTTQYRMHQKIMDFPSDELYESKLIAADAVRERLLKDLHYEVEDTDDTREPLVFY 552
Query: 483 DIAGCDMEEKKDEED----------STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYA 532
D G D EK + + S N+ EA V H + L+ +GV DI +ITPY
Sbjct: 553 DTQGGDFLEKSPDSNGISAKSLLVESKCNDMEAAVVARHVENLVSAGVRPEDIAVITPYN 612
Query: 533 AQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVA 592
AQV LL L +K +E+ +VDGFQGREKEA+++S+VRSN EVGFL ++RR+NVA
Sbjct: 613 AQVALLSQLLK--EKFPTLELGSVDGFQGREKEAVVVSLVRSNQDHEVGFLGEKRRLNVA 670
Query: 593 VTRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE--YLSGSEYLN 636
+TR RR C+ D+ETVSS FLKR + + EE+A+ Y SE+ N
Sbjct: 671 MTRPRRHLCICGDSETVSSGSPFLKRWMAFLEENADLRYPDISEFTN 717
>gi|315045920|ref|XP_003172335.1| DNA-binding protein SMUBP-2 [Arthroderma gypseum CBS 118893]
gi|311342721|gb|EFR01924.1| DNA-binding protein SMUBP-2 [Arthroderma gypseum CBS 118893]
Length = 717
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 246/587 (41%), Positives = 343/587 (58%), Gaps = 64/587 (10%)
Query: 111 QGVVYRLKDSSITVAFDD-----IPEEGLNS----PLRLEKLANEVTYRRMKDALIQLSK 161
+GVV R+ + +I AF D E+G++ L L KLAN+VTYRRM +++L K
Sbjct: 134 EGVVTRVGERAIWAAFGDRGKGKQDEDGVDELWGRKLWLVKLANDVTYRRMNMTMMKLEK 193
Query: 162 GVQNGPAAGLIPVLFGEQKPTVLKKDIA--FKPFNSNLDHSQKDAISKALSSKNVFMLHG 219
+Q + LI VLFG P+ L + + + +L+ SQK+AI AL+S+ + ++HG
Sbjct: 194 -MQESEYSQLIRVLFGHTTPSPLDFESVGQLEFMDGSLNGSQKEAIRFALASREIALIHG 252
Query: 220 PPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQ 279
PPGTGKT T++E+I Q V+R ++L C SNI+VDNIVERL +V LVR+GHPARLL
Sbjct: 253 PPGTGKTHTLIELIRQLVQRKKRVLVCGPSNISVDNIVERLASQKVSLVRIGHPARLLSS 312
Query: 280 VLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQ 339
VL+ +L+ + +++ D+RKE+ + KT++ RR I +LR L KE R+R+
Sbjct: 313 VLDHSLEVLSQTSEAAAIVKDVRKEIDLKQASIRKTRNGRERRAIYGDLRELRKEFRERE 372
Query: 340 QLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILA 399
V +++ + VVL TL GA +L N FD+VIIDEA+QA E CWI LL S+ ILA
Sbjct: 373 SKCVDNIVSGSQVVLGTLHGAGGHQLKNQKFDVVIIDEASQAREAQCWIPLLSASKVILA 432
Query: 400 GDHLQLPPTVQSVEAEKKG-------------------------LGRTLFERLADLYGDE 434
GDHLQLPPT++S + K G L TLF+RL L+G
Sbjct: 433 GDHLQLPPTIKSRSSSKPGQNNSALWDKEDLDLTELSNKFDMRNLEITLFDRLLSLHGTA 492
Query: 435 VTSMLTVQYRMHEHIMNWSSKQLYNSK-----------IKAHPSGVKRTSSTEPTLLLID 483
+ MLT QYRMH+ IM++ S +LY SK +K P ++ T L+ D
Sbjct: 493 IKRMLTTQYRMHQKIMDFPSGELYESKLIAADAVRERLLKDLPYEIEDIDDTIEPLVFYD 552
Query: 484 IAGCDMEEKKDEE----------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAA 533
G D EK + +S N+ EAEV H + L+ +GV DI +ITPY A
Sbjct: 553 TQGGDFLEKSPDSTSISAKSLLVESKCNDMEAEVVARHVENLVSAGVRPEDIAVITPYNA 612
Query: 534 QVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN-VA 592
QV LL L + K +E+ +VDGFQGREKEA+++S+VRSNS EVGFL ++RR+N VA
Sbjct: 613 QVALLSQLLKQ--KFPTLELGSVDGFQGREKEAVVVSLVRSNSDHEVGFLGEKRRLNAVA 670
Query: 593 VTRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE--YLSGSEYLN 636
+TR RR C+ D+ETV S FLKR + + EE+A+ Y SE+ N
Sbjct: 671 MTRPRRHLCICGDSETVGSGSPFLKRWMAFLEENADLRYPDISEFAN 717
>gi|225679961|gb|EEH18245.1| DNA-binding protein SMUBP-2 [Paracoccidioides brasiliensis Pb03]
Length = 753
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 236/600 (39%), Positives = 348/600 (58%), Gaps = 81/600 (13%)
Query: 111 QGVVYRLKDSSITVAFDDIPEEG-----------LNSPLRLEKLANEVTYRRMKDALIQL 159
+GVV R+ + S+ VAF D + G + + KLAN++TYRRMK + ++
Sbjct: 160 EGVVTRVGERSVWVAFSDRGDLGKGRDEESVEDLWARKVWMVKLANDITYRRMKQTMTKM 219
Query: 160 SKGVQNGPAAGLIPVLFGEQKPTVLKKD----IAFKPFNSNLDHSQKDAISKALSSKNVF 215
+ + + V+FG P+ + D I F + L+ SQ++AI AL+S+ +
Sbjct: 220 -ENMTESEYTYFMRVVFGHTTPSPVDMDSIGTIDF--IDPTLNDSQREAIRFALASREIA 276
Query: 216 MLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPAR 275
++HGPPGTGKT T++E+ILQ ++R ++L C SN++VDNIVERL PH+V LVR+GHPAR
Sbjct: 277 LIHGPPGTGKTYTLIELILQLLRRNLRVLVCGPSNVSVDNIVERLAPHKVPLVRIGHPAR 336
Query: 276 LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEE 335
LL +L+ +L+ D +++ D+RKE++ + KT+ RREI ++L+ L KE
Sbjct: 337 LLSTILDYSLEVLTQTSDAAAIVKDVRKEIEIKQASIRKTRSGRERREIYRDLKELRKEF 396
Query: 336 RKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR 395
R+R+ V +++ ++ VVL TL GA +L N FD+VIIDEA+QALE CW+ LL ++
Sbjct: 397 REREAKCVGNLVTDSKVVLATLHGAGGHQLRNQKFDVVIIDEASQALEAQCWVPLLSATK 456
Query: 396 CILAGDHLQLPPTVQSVEAEKKG--------------------------------LGRTL 423
ILAGDHLQLPPT++SV + G L TL
Sbjct: 457 AILAGDHLQLPPTIRSVPLKSNGAESGKSNGEEKATLSADKDSSVGQHKATKGVTLEVTL 516
Query: 424 FERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS-----------GVKRT 472
F+RL L+G + MLT QYRMHE IM + SK+LY SK+ A + V T
Sbjct: 517 FDRLLSLHGPAIKRMLTTQYRMHEKIMKFPSKELYESKLVAADAVKLRLLKDLQYEVAET 576
Query: 473 SSTEPTLLLIDIAGCDMEEKKDEE-------------DSTMNEGEAEVAMAHAKRLIQSG 519
T L+ D G D E+ +E +S N+ EA V H + L+ +G
Sbjct: 577 DDTREPLVFYDTQGGDFPEQTEEPAVESKQKQEPMFAESKSNDMEAAVVSRHVENLVATG 636
Query: 520 VHASDIGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK 578
V DI ++TPY AQ+ +L ++LR DK +E+ +VDGFQGREKEA+I+S+VRSN +
Sbjct: 637 VKPEDIAVVTPYNAQLAILSQLLR---DKHPGIELGSVDGFQGREKEAVIVSLVRSNPEH 693
Query: 579 EVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE--YLSGSEYL 635
+VGFL ++RR+NVA+TR +R C+ D+ET+ FL+R +++ EE+A+ Y SEYL
Sbjct: 694 KVGFLGEKRRLNVAMTRPKRHLCVCGDSETIRRGSQFLRRWMDFLEENADLRYPDASEYL 753
>gi|159128659|gb|EDP53773.1| DNA helicase, putative [Aspergillus fumigatus A1163]
Length = 730
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 277/732 (37%), Positives = 395/732 (53%), Gaps = 116/732 (15%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLD-----TAQKKGSTILNLKCVDAQTG 67
+S+ F L+ E EAEIS+S + + ++ T Q G + + +TG
Sbjct: 6 ISIPRFAQAQLQLLLQEHEAEISSSSLANTAASVSPSTRRTLQATGYALTGIVLSQCRTG 65
Query: 68 LMGKTLLEF---------QSTKGDV------------LPAHKFGTHDVVVLKPNKADLGS 106
L G+ + EF +ST + L AH D+V + + + GS
Sbjct: 66 LGGRVVGEFTADAAVSSSKSTTNKIDDDRAGADGEPRLGAHGIRVGDIVRVN-DTSGSGS 124
Query: 107 PALG------------------QGVVYRLKDSSITVAF------------DDIPEEGLNS 136
L +GVV R+ + SI +AF D+ EE
Sbjct: 125 RKLSKDRGKAGGKDAVEASKGPEGVVTRVGERSIWIAFGQRGGSGRSKEDDEAIEELWGK 184
Query: 137 PLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDI-AFKPF-- 193
L L KLAN+VT+RRM + +++K + + + + V FG P ++ D A P
Sbjct: 185 KLWLIKLANDVTFRRMNQTMEKMAK-MTDSEYSHFMRVAFGHTAP--MQPDYGAIGPLEF 241
Query: 194 -NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIA 252
+ L+ SQK+AI AL++++V ++HGPPGTGKT T++E+ILQ VKR ++L C SNI+
Sbjct: 242 VDPTLNDSQKEAIRFALAARDVALIHGPPGTGKTHTLIELILQMVKRKLRVLVCGPSNIS 301
Query: 253 VDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKL 312
VDNIVERL P+ V +VR+GHPARLLP VLE +L+ + +++ D+RKE+ +
Sbjct: 302 VDNIVERLAPNGVPVVRIGHPARLLPSVLEHSLEVLTHTSEAAAIIKDVRKEIDEKQASI 361
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KT+ RR I +L+ L +E R+R+ V ++++ ++VVL TL GA +L N FD+
Sbjct: 362 RKTRTGRERRAIYDDLKELRREFRERESRCVDNLVRESNVVLATLHGAGGHQLKNQKFDV 421
Query: 373 VIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSV-------------------- 412
V+IDEA+QALE CWI LL S+ +LAGDHLQLPPTV+S
Sbjct: 422 VVIDEASQALEAQCWIPLLSASKVVLAGDHLQLPPTVKSSVDKLKNTKKKEKSDTKDASA 481
Query: 413 -EAEKKG---LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH--- 465
AE G L TLF+RL L+G + MLT QYRMHE IM + S +LY SK+ A
Sbjct: 482 NSAEIIGDFSLETTLFDRLLSLHGPGIKRMLTTQYRMHEKIMQFPSDELYESKLVAAEAV 541
Query: 466 --------PSGVKRTSSTEPTLLLIDIAGCDMEEKKDEED----------STMNEGEAEV 507
P V+ T T ++ D G D EK +++D S NE EA V
Sbjct: 542 KSRLLKDLPYEVEETDDTREPIVFWDTQGGDFPEKTEDDDVGKKEALLGESKSNEMEALV 601
Query: 508 AMAHAKRLIQSGVHASDIGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEA 566
H + LIQ+GV DI ITPY Q+ LL +LR +K +E+ +VDGFQGREKEA
Sbjct: 602 VAKHVQNLIQAGVKPEDIACITPYNGQLSLLSSMLR---EKYPGLELGSVDGFQGREKEA 658
Query: 567 IIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS-SDGFLKRLIEYFEEH 625
+++S+VRSNS+ EVGFL ++RR+NVA+TR +R C+ D+ET+S FLKR + + EEH
Sbjct: 659 VVVSLVRSNSEHEVGFLGEKRRLNVAMTRPKRHLCICGDSETISKGSAFLKRWMAFLEEH 718
Query: 626 AE--YLSGSEYL 635
A+ Y E L
Sbjct: 719 ADLRYPDAGELL 730
>gi|452847528|gb|EME49460.1| hypothetical protein DOTSEDRAFT_84844 [Dothistroma septosporum
NZE10]
Length = 710
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 268/707 (37%), Positives = 401/707 (56%), Gaps = 102/707 (14%)
Query: 12 AVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGK 71
A + F L+D E +AE++ + ++ T ++ G +LNL+ +TG GK
Sbjct: 3 ATDIASFAGSQLSLLDKELQAELAETHLLTSTHAPVTLERAGLALLNLEVSSQRTGFAGK 62
Query: 72 TLLEFQ-----STKGDVLPAHKFGTHDVVVL--KPNKADLG------SPALGQGVVYRLK 118
+LL+ S+ G+ LP H D+ L +P A+ +GVV R +
Sbjct: 63 SLLDLGPDPAVSSTGE-LPEHGLRVGDICALAEQPKGAERKKERGRMEKRGAEGVVTRTQ 121
Query: 119 DSSITVAFD----DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPV 174
S+ITVA D+P N L L KLAN+VT++R+ + +L K +Q + L V
Sbjct: 122 KSTITVALAKEDVDVP----NGKLWLVKLANDVTHKRLTQTMQKLQK-MQPSAHSTLTQV 176
Query: 175 LFGEQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTV 229
LFG+ + L+K++ + + L+ SQKDAI AL+++ V ++HGPPGTGKT T+
Sbjct: 177 LFGQTSISPVSRSELEKEVQW--IDLALNDSQKDAIRFALAAQEVALIHGPPGTGKTHTL 234
Query: 230 VEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQV 289
VE+ LQ +KR ++L C SN++VDNIVERL PH+V +VRLGHPARLLP VL+ +++
Sbjct: 235 VELTLQLLKRQLRLLVCGPSNVSVDNIVERLAPHKVAMVRLGHPARLLPTVLKHSMEVLS 294
Query: 290 LRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKN 349
D +++ +DIR EM + + KT+ R+ I EL+ L KE R R+ V+D++++
Sbjct: 295 RCSDAAAIVTDIRAEMDSKQASIRKTRSGRERKAIYGELKELRKEYRHREGRVVSDLLRS 354
Query: 350 ADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLK--GSRCILAGDHLQLPP 407
+ VVL+TL GA S +L + FD++++DEA+QALE CWI +L S+ ILAGDHLQLPP
Sbjct: 355 SHVVLSTLHGAGSYQLKDQKFDVIVVDEASQALEAQCWIPILASGASKLILAGDHLQLPP 414
Query: 408 TV--QSVEAEK------------------------------------KG----LGRTLFE 425
T+ Q+V+AEK KG L TLF+
Sbjct: 415 TIKSQNVKAEKAPDESATVAKADHLTGDVAKLSLKDGKADSGDSNRTKGDPVKLETTLFD 474
Query: 426 RLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSS 474
RL L+G ++ MLT QYRMHE IM + S+ LY ++ A P V+ +
Sbjct: 475 RLLSLHGGKIKRMLTTQYRMHESIMQYPSEALYEEQLIAAEAVKSRLLKDLPYEVQASED 534
Query: 475 TEPTLLLIDIAGCDMEEK-KDEE-----------DSTMNEGEAEVAMAHAKRLIQSGVHA 522
T L+ D G D EK +D+E +S +NE EA + L+ +GV A
Sbjct: 535 TTEALVFWDTQGGDFPEKVEDDEAGSKGKSSLLAESKVNELEALIVQRQVSSLVNAGVKA 594
Query: 523 SDIGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVG 581
DI I+TPY Q+ LL ++L++ + +E+ +VDGFQGREKEA+++S+VRSN ++EVG
Sbjct: 595 EDIAIVTPYNGQLALLSQMLKA---RYAGIELGSVDGFQGREKEAVVVSLVRSNPQREVG 651
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVS-SDGFLKRLIEYFEEHAE 627
FL ++RR+NVA+TR RR C++ D+ET+S FL+ + + EEHA+
Sbjct: 652 FLGEKRRLNVAMTRPRRHLCIIGDSETISRGSQFLRSWMAFLEEHAD 698
>gi|70988781|ref|XP_749245.1| DNA helicase [Aspergillus fumigatus Af293]
gi|66846876|gb|EAL87207.1| DNA helicase, putative [Aspergillus fumigatus Af293]
Length = 730
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 277/732 (37%), Positives = 395/732 (53%), Gaps = 116/732 (15%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLD-----TAQKKGSTILNLKCVDAQTG 67
+S+ F L+ E EAEIS+S + + ++ T Q G + + +TG
Sbjct: 6 ISIPRFAQAQLQLLLQEHEAEISSSSLANTAASVSPSTRRTLQATGYALTGIVLSQCRTG 65
Query: 68 LMGKTLLEF---------QSTKGDV------------LPAHKFGTHDVVVLKPNKADLGS 106
L G+ + EF +ST + L AH D+V + + + GS
Sbjct: 66 LGGRVVGEFTADAAVSSSKSTTNKIDDDRAGADGEPRLGAHGIRVGDIVRVN-DTSGSGS 124
Query: 107 PALG------------------QGVVYRLKDSSITVAF------------DDIPEEGLNS 136
L +GVV R+ + SI +AF D+ EE
Sbjct: 125 RKLSKDRGKAGGKDAVEASKGPEGVVTRVGERSIWIAFGQRGGSGRSKEDDEAIEELWGK 184
Query: 137 PLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDI-AFKPF-- 193
L L KLAN+VT+RRM + +++K + + + + V FG P ++ D A P
Sbjct: 185 KLWLIKLANDVTFRRMNQTMEKMAK-MTDSEYSHFMRVAFGHTAP--MQPDYGAIGPLEF 241
Query: 194 -NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIA 252
+ L+ SQK+AI AL++++V ++HGPPGTGKT T++E+ILQ VKR ++L C SNI+
Sbjct: 242 VDPTLNDSQKEAIRFALAARDVALIHGPPGTGKTHTLIELILQMVKRKLRVLVCGPSNIS 301
Query: 253 VDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKL 312
VDNIVERL P+ V +VR+GHPARLLP VLE +L+ + +++ D+RKE+ +
Sbjct: 302 VDNIVERLAPNGVPVVRIGHPARLLPSVLEHSLEVLTHTSEAAAIIKDVRKEIDEKQASI 361
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KT+ RR I +L+ L +E R+R+ V ++++ ++VVL TL GA +L N FD+
Sbjct: 362 RKTRTGRERRAIYDDLKELRREFRERESRCVDNLVRESNVVLATLHGAGGHQLKNQKFDV 421
Query: 373 VIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSV-------------------- 412
V+IDEA+QALE CWI LL S+ +LAGDHLQLPPTV+S
Sbjct: 422 VVIDEASQALEAQCWIPLLSASKVVLAGDHLQLPPTVKSSVDKLKNTKKKEKSDTKDASA 481
Query: 413 -EAEKKG---LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH--- 465
AE G L TLF+RL L+G + MLT QYRMHE IM + S +LY SK+ A
Sbjct: 482 NSAEIIGDFSLETTLFDRLLSLHGPGIKRMLTTQYRMHEKIMQFPSDELYESKLVAAETV 541
Query: 466 --------PSGVKRTSSTEPTLLLIDIAGCDMEEKKDEED----------STMNEGEAEV 507
P V+ T T ++ D G D EK +++D S NE EA V
Sbjct: 542 KSRLLKDLPYEVEETDDTREPIVFWDTQGGDFPEKTEDDDVGKKEALLGESKSNEMEALV 601
Query: 508 AMAHAKRLIQSGVHASDIGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEA 566
H + LIQ+GV DI ITPY Q+ LL +LR +K +E+ +VDGFQGREKEA
Sbjct: 602 VAKHVQNLIQAGVKPEDIACITPYNGQLSLLSSMLR---EKYPGLELGSVDGFQGREKEA 658
Query: 567 IIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS-SDGFLKRLIEYFEEH 625
+++S+VRSNS+ EVGFL ++RR+NVA+TR +R C+ D+ET+S FLKR + + EEH
Sbjct: 659 VVVSLVRSNSEHEVGFLGEKRRLNVAMTRPKRHLCICGDSETISKGSAFLKRWMAFLEEH 718
Query: 626 AE--YLSGSEYL 635
A+ Y E L
Sbjct: 719 ADLRYPDAGELL 730
>gi|346324459|gb|EGX94056.1| DNA-binding protein SMUBP-2 [Cordyceps militaris CM01]
Length = 1735
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 246/634 (38%), Positives = 361/634 (56%), Gaps = 65/634 (10%)
Query: 18 FVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF- 76
F S L++ E ++E+ + T + + Q+ G I NL +TGL G+T+LE
Sbjct: 1096 FASTQVALLERELQSEVQETSTLITNHSPARLQRAGLAITNLVVASQRTGLGGRTVLELG 1155
Query: 77 ----QSTKGDVLPAHKFGTHDVVVLKPNKADLGSPAL----------GQGVVYRLKDSSI 122
ST G+ LP H T D+V++ A GS +GVV +++ +S+
Sbjct: 1156 PDSATSTTGE-LPEHGLRTGDIVLVADQPA--GSAKKKEIQELEKKGARGVVTKVQKTSV 1212
Query: 123 TVAFDDIPEE-GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKP 181
A DD +E + KLA+EVTYRRM + +L K + + I VLFG P
Sbjct: 1213 FAALDDGKDEVAFGGKAWMVKLADEVTYRRMNLVMEKLQK-MSEAEYSSFIQVLFGLSSP 1271
Query: 182 TVLKKDIA-------FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIIL 234
+ + KD++ + F+ L+ SQKDAI AL+S+ + ++HGPPGTGKT T++E+IL
Sbjct: 1272 SPVPKDLSADEELSKIEWFDPTLNDSQKDAIRFALASREIALIHGPPGTGKTHTLIELIL 1331
Query: 235 QEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDN 294
Q +K ++L C SNI+VDNIVERL PH+V ++RLGHPARLLP V+ +LD +
Sbjct: 1332 QLIKLKKRVLVCGPSNISVDNIVERLSPHKVPILRLGHPARLLPSVVNHSLDVLTQTSEA 1391
Query: 295 SSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVL 354
++ D+R EM A + KTK RR+I +LR L KE R+R++ V++++ + VVL
Sbjct: 1392 GAIVKDVRAEMDAKQASIKKTKSGKERRQIYGDLRELRKEYRERERKCVSNLVGGSKVVL 1451
Query: 355 TTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA 414
TL GA +L + FD+VIIDEA+QALE CW+ LL ++ + AGDHLQLPPT++S +
Sbjct: 1452 ATLHGAGGHQLRSEKFDVVIIDEASQALEAQCWVPLLSANKAVCAGDHLQLPPTIKSSNS 1511
Query: 415 EK-------------KG--LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYN 459
+ KG L TLF+RL L+G + MLT QYRMHE IM + S +LY
Sbjct: 1512 KAALKLKDGPEAKPIKGMTLETTLFDRLLALHGPSIKRMLTTQYRMHEKIMRFPSDELYE 1571
Query: 460 SKIKAHPSGVKR-----------TSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVA 508
SK+ A + R T L+ ID G D E+ +E+D V
Sbjct: 1572 SKLVAAEAVKSRLLKELEYKIDDNEDTGEPLIFIDTQGGDFPERSEEDD---------VE 1622
Query: 509 MAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAII 568
+L+++G+ A DI ++TPY AQ+ +L L+ +K +E+ +VDGFQGREKEA+I
Sbjct: 1623 NPKKAKLVEAGLKAEDIAVVTPYNAQLAVLAPLK---EKFPGIELGSVDGFQGREKEAVI 1679
Query: 569 ISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCL 602
+S+VRSN++ EVGFL ++RR+N +R C+
Sbjct: 1680 VSLVRSNTEGEVGFLGEKRRLNGMSSRGEAVSCI 1713
>gi|330944918|ref|XP_003306458.1| hypothetical protein PTT_19600 [Pyrenophora teres f. teres 0-1]
gi|311316071|gb|EFQ85482.1| hypothetical protein PTT_19600 [Pyrenophora teres f. teres 0-1]
Length = 674
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 263/677 (38%), Positives = 380/677 (56%), Gaps = 91/677 (13%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
+ F + L+D E +AE+S + +S N + + G ILNL +TGL GKT++
Sbjct: 7 IPSFAASQLTLLDAELQAELSETNALLSSHNPTSLARAGLAILNLNVSSIRTGLGGKTVV 66
Query: 75 EF--------QSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQ----------GVVYR 116
E + K D+ P H D+V ++ + GS + GVV +
Sbjct: 67 ELGLDSAVVAKGEKADI-PEHGIRVGDIVAVQDQPS--GSAKKAEKKELEKKGAAGVVLK 123
Query: 117 LKDSSITVAFD----DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSK-GVQNGPAAGL 171
++ ++ + D D+P G L + KLAN+VTY+RM + +L K G Q+
Sbjct: 124 VRRENVEIVLDKEDADVPTGG---KLWIVKLANDVTYKRMNQTMSRLQKLGDQD--YTPF 178
Query: 172 IPVLFGEQKPTVLKKDI--------AFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGT 223
+ VLFG+ PT L D+ + +++L+ SQ++AI AL+S+ V ++HGPPGT
Sbjct: 179 MRVLFGQASPTPLPSDVNDPSNPLYKLEWIDASLNDSQQEAIRFALASREVALIHGPPGT 238
Query: 224 GKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLES 283
GKT T++E+ILQ +K+ ++L C SNI+VDNIVERL H+V +VRLGHPARLLP VL
Sbjct: 239 GKTHTLIELILQLLKQKLRLLVCGPSNISVDNIVERLASHKVPMVRLGHPARLLPSVLSH 298
Query: 284 ALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAV 343
+LD + ++L D+RKEM + KT++ RR+I EL+ L +E R+R++ V
Sbjct: 299 SLDVLTRTSEAAALVQDVRKEMDDKQSSIRKTRNAKERRQIYTELKELRQEFREREKGCV 358
Query: 344 TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL--KGSRCILAGD 401
+++ + VVL TL GA L FD+VI+DEA+QALE CW+ LL K S+ +LAGD
Sbjct: 359 NNLVSGSKVVLATLHGAGGFHLKGQEFDVVIVDEASQALEAQCWVPLLWVKASKLVLAGD 418
Query: 402 HLQLPPTVQSV--------------------EAEKK----GLGRTLFERLADLYGDEVTS 437
HLQLPPT++S+ EAEK L TLF+RL L+G +
Sbjct: 419 HLQLPPTIKSLNSKESKAAKKDAKKSKDETDEAEKSTSSMTLETTLFDRLLALHGPSIKR 478
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLIDIAG 486
MLT QYRMHE IM + S +LY+SK+ A P V+ T + L+ D G
Sbjct: 479 MLTTQYRMHERIMRFPSDELYDSKLIAADLVKERLLKDLPYEVEDTEDSREPLVFWDTQG 538
Query: 487 CDMEEKKDEE-------------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAA 533
+ EK ++ DS NE EA + H LI +GV A DI ++TPY A
Sbjct: 539 GEFPEKIEDSGVIGKGGKGMNVGDSKSNEAEAALVKMHVSNLISAGVKAEDIAVVTPYNA 598
Query: 534 QVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAV 593
Q+ LL + + +E+ +VDGFQGREKEA+I+S VRSNSK EVGFL ++RR+NVA+
Sbjct: 599 QLALLGGMLK--EAYPGIELGSVDGFQGREKEAVIVSTVRSNSKHEVGFLGEKRRLNVAM 656
Query: 594 TRARRQCCLVCDTETVS 610
TR +R C++ D+ET+S
Sbjct: 657 TRPKRHLCVIGDSETIS 673
>gi|121711100|ref|XP_001273166.1| DNA helicase, putative [Aspergillus clavatus NRRL 1]
gi|119401316|gb|EAW11740.1| DNA helicase, putative [Aspergillus clavatus NRRL 1]
Length = 760
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 273/747 (36%), Positives = 383/747 (51%), Gaps = 149/747 (19%)
Query: 29 EKEAEISASITSGASRNLD-----TAQKKGSTILNLKCVDAQTGLMGKTLLEF------- 76
E EAEIS+S+ + + ++ T Q G + + +TGL G+ + EF
Sbjct: 23 EHEAEISSSVLASTAASVSPSTRRTLQATGYALTGIVLSQCRTGLGGRVVGEFAADAAVS 82
Query: 77 -QSTKGD------------VLPAHKFGTHDVVVLKPNKADLGSPALG------------- 110
+S GD L AH D+V + D+
Sbjct: 83 SKSKGGDGNTDRGSSDGEPRLGAHGIRVGDIVRVN----DISGSGSKKSAKDKGKGGGKD 138
Query: 111 --------QGVVYRLKDSSITVAF------------DDIPEEGLNSPLRLEKLANEVTYR 150
+GVV R+ + SI +AF D+ EE L L KLAN+VTYR
Sbjct: 139 TADESKGPEGVVTRVGERSIWIAFGQRGGGGRSKEDDEAIEELWGKKLWLIKLANDVTYR 198
Query: 151 RMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPF---NSNLDHSQKDAISK 207
RM + ++SK + + + V FG P D A P + L+ SQK+AI
Sbjct: 199 RMNQTMEKMSK-MTDSDYTHFMRVAFGHTTPMQPGYD-AIGPIEITDPTLNDSQKEAIRF 256
Query: 208 ALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRL 267
AL+S++V ++HGPPGTGKT T++E+I+Q VKR ++L C SNI+VDNIVERL +V +
Sbjct: 257 ALASRDVALIHGPPGTGKTHTLIELIIQMVKRKLRVLVCGPSNISVDNIVERLALKKVPI 316
Query: 268 VRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKE 327
VR+GHPARLLP VLE +L+ + +++ D+RKE+ + KTK RR I +
Sbjct: 317 VRIGHPARLLPSVLEHSLEVLTHTSEAAAIVKDVRKEIDEKQASIRKTKSGRERRAIYGD 376
Query: 328 LRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACW 387
L+ L +E R R+ V ++++ + VVL TL GA +L N FD+V+IDEA+QALE CW
Sbjct: 377 LKELRREYRDRESKCVDNLVRESSVVLATLHGAGGHQLKNQKFDVVVIDEASQALEAQCW 436
Query: 388 IALLKGSRCILAGDHLQLPPTVQSV-----EAEKKG---------------------LGR 421
I+LL S+ +LAGDHLQLPPTV+S A+ KG L
Sbjct: 437 ISLLSASKVVLAGDHLQLPPTVKSTVQKSKSAKTKGQSNTKSGSTDASDADIIGGVSLET 496
Query: 422 TLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVK 470
T+F+RL L+G + MLT QYRMHE IM + S +LY S++ A P V+
Sbjct: 497 TMFDRLLALHGPGIKRMLTTQYRMHEKIMQFPSDELYESRLIAADSVKLRLLKDLPYEVE 556
Query: 471 RTSSTEPTLLLIDIAGCDMEEKKDEE----------DSTMNEGEAEVAMAHAKRLIQSGV 520
T T+ L+ D G D EK +++ +S NE EA V + H LIQSGV
Sbjct: 557 ETDDTKEPLVFWDTQGGDFPEKTEDDEIGKKEALLGESKSNEMEALVVVKHVDNLIQSGV 616
Query: 521 HASDIGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKE 579
DI ITPY Q+ LL +LR +K +E+ +VDGFQGREKEA+++S+VRSN + E
Sbjct: 617 RPEDIACITPYNGQLALLSSMLR---EKYPGLELGSVDGFQGREKEAVVVSLVRSNPENE 673
Query: 580 VGFLSDRRRMNVAVTRARRQCCLVCDTETVS----------------------------- 610
VGFL ++RR+NVA+TR +R C+ D ET+S
Sbjct: 674 VGFLGEKRRLNVAMTRPKRHLCICGDAETISKSVNSVHCHSLENVEPRKTNADKKPLMYR 733
Query: 611 SDGFLKRLIEYFEEHAE--YLSGSEYL 635
FLKR + + EEHA+ Y +E L
Sbjct: 734 GSPFLKRWMGFLEEHADLRYPDAAEVL 760
>gi|19075869|ref|NP_588369.1| DNA polymerase alpha-associated DNA helicase A (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74676175|sp|O94247.1|HCS1_SCHPO RecName: Full=DNA polymerase alpha-associated DNA helicase A
gi|4239673|emb|CAA20863.1| DNA polymerase alpha-associated DNA helicase A (predicted)
[Schizosaccharomyces pombe]
Length = 660
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 251/651 (38%), Positives = 368/651 (56%), Gaps = 55/651 (8%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
+Q+F +D +++E+ + S L Q+KG ++NL+ +TG GKT++
Sbjct: 15 IQKFGDREIEFVDEAQKSEVDETEKSIKRFPLSVLQRKGLALINLRIGVVKTGFGGKTII 74
Query: 75 EFQS----TKGDVLPAHKFGTHDVVVLK----------PNKADLGSPALGQGVVYRLKDS 120
+F+ + G+ LPA+ F DVV ++ PN+ D+ +GVV R+ +
Sbjct: 75 DFEKDPAFSNGEELPANSFSPGDVVSIRQDFQSSKKKRPNETDISV----EGVVTRVHER 130
Query: 121 SITVAF---DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFG 177
I+VA +DIP + L + KL N VTY RM+ +++ + + + L L G
Sbjct: 131 HISVALKSEEDIPSSV--TRLSVVKLVNRVTYERMRHTMLEFKRSIPEYRNS-LFYTLIG 187
Query: 178 EQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEI 232
+K V L DI + FN L+ SQK A+ +++ K + ++HGPPGTGKT T+VEI
Sbjct: 188 RKKADVSIDQKLIGDIKY--FNKELNASQKKAVKFSIAVKELSLIHGPPGTGKTHTLVEI 245
Query: 233 ILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRG 292
I Q V R +IL C ASN+AVDNIV+RL + +VRLGHPARLLP +L+ +LD G
Sbjct: 246 IQQLVLRNKRILVCGASNLAVDNIVDRLSSSGIPMVRLGHPARLLPSILDHSLDVLSRTG 305
Query: 293 DNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADV 352
DN + I +++ K+ KTK+ RREI K +R L K+ RK + V +++ + V
Sbjct: 306 DNGDVIRGISEDIDVCLSKITKTKNGRERREIYKNIRELRKDYRKYEAKTVANIVSASKV 365
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSV 412
V TL GA SR+L FD VIIDEA+QALE CWI LL ++ ILAGDH+QL P VQS
Sbjct: 366 VFCTLHGAGSRQLKGQRFDAVIIDEASQALEPQCWIPLLGMNKVILAGDHMQLSPNVQS- 424
Query: 413 EAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR- 471
K ++FERL GD V L +QYRMHE I + S Y+SK+ KR
Sbjct: 425 ----KRPYISMFERLVKSQGDLVKCFLNIQYRMHELISKFPSDTFYDSKLVPAEEVKKRL 480
Query: 472 ---------TSSTEPTLLLIDIAGCDMEEKKDE------EDSTMNEGEAEVAMAHAKRLI 516
T T+ + D G E+ + E +DS N EA++ H L+
Sbjct: 481 LMDLENVEETELTDSPIYFYDTLGNYQEDDRSEDMQNFYQDSKSNHWEAQIVSYHISGLL 540
Query: 517 QSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNS 576
++G+ A DI ++TPY AQV L++ L +K +E+ +VD QGREKEAII S+VRSN
Sbjct: 541 EAGLEAKDIAVVTPYNAQVALIRQLLK--EKGIEVEMGSVDKVQGREKEAIIFSLVRSND 598
Query: 577 KKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS-SDGFLKRLIEYFEEHA 626
+EVGFL+++RR+NVA+TR +R C++ D+ TV + F + +++ EE+A
Sbjct: 599 VREVGFLAEKRRLNVAITRPKRHLCVIGDSNTVKWASEFFHQWVDFLEENA 649
>gi|302680102|ref|XP_003029733.1| hypothetical protein SCHCODRAFT_78153 [Schizophyllum commune H4-8]
gi|300103423|gb|EFI94830.1| hypothetical protein SCHCODRAFT_78153 [Schizophyllum commune H4-8]
Length = 708
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 268/709 (37%), Positives = 374/709 (52%), Gaps = 99/709 (13%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
+L F+ L+ E++AEI S ++ + KG +LNL GL GKTL
Sbjct: 5 NLSRFIERQRQLLSAERQAEIERSSLLLSNCGPKLLEHKGLALLNLGVASINIGLGGKTL 64
Query: 74 LEFQSTKGD----VLPAHKFGTHDVVVLKPNKADLGSPA-----------------LGQG 112
+E + + P H T D+ ++ N +P + +G
Sbjct: 65 VELERPSAHHASPIFPLHTLRTGDLACIEANVT--STPKTKGASKKQASTTEYKGKVAEG 122
Query: 113 VVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSK-GVQNGPAAGL 171
VVY++ D+ ITVA D E L LRL KLAN VTY RM A+ L K N P
Sbjct: 123 VVYKMSDTRITVAVDTDEELDLPDRLRLVKLANNVTYDRMDKAIDTLEKITSDNPPDDKA 182
Query: 172 IP-------VLFGEQKPT--VLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPG 222
P VL G+ P+ V D+ F + L+ SQKDAI L S V +HGPPG
Sbjct: 183 FPRLNTMHHVLLGQASPSAKVAVNDLEF--LDPTLNDSQKDAIRFCLGSPEVACIHGPPG 240
Query: 223 TGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVP-------HRVRLVRLGHPAR 275
TGKT T++E+I Q RG ++L C ASN+AVDNI+ERL+ R+++ R+GHPAR
Sbjct: 241 TGKTHTLIELIWQLCARGQRLLVCGASNLAVDNILERLLALPADSRTSRLKVTRVGHPAR 300
Query: 276 LLPQ--VLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNT--------RREIQ 325
++ VL++ L+ Q R D ++LA D++ E++A G L R+++
Sbjct: 301 VMANEDVLDATLEVQAGRTDAAALAKDVKAELEAALGVLSGKGKGAKGKAPRGLERKKMW 360
Query: 326 KELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIA 385
E++ L KE R+R+ V V+ A VVL T A +R+L + FD VIIDEA QA+E
Sbjct: 361 DEVKALRKEYRQREGGVVKSVLSEAQVVLATCHTAGNRQLRSLDFDTVIIDEATQAVEAV 420
Query: 386 CWIALLKGSRCILAGDHLQLPPTVQSVEAEKKG-----------------LGRTLFERLA 428
CW+ + K + +LAGD +QLPPT+ S++ KKG L TLF+RL
Sbjct: 421 CWVPIFKAKKLVLAGDPMQLPPTILSID--KKGKDKKQRTRTPILRPPRTLETTLFDRLE 478
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTL--------- 479
++G + ML VQYRMHE I + SK LY K++ PS KR P++
Sbjct: 479 RMHGPSIKRMLKVQYRMHEDICAFPSKALYGGKLQPDPSVAKRLLRDLPSVQIARESAGI 538
Query: 480 ------------LLIDIAGCDMEEK---KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD 524
+ D AGC+ E+ ++E S NE EA + L Q+GV S
Sbjct: 539 GEDEDDPLASPVVFFDTAGCEYYERLEGDNDEGSRCNENEATIVKGWVGELTQAGVLPSQ 598
Query: 525 IGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFL 583
I +ITPY AQ+ LL +LR ++E+ TVDG QGREKEA+IISMVRSN K+EVGFL
Sbjct: 599 IAVITPYQAQLGLLTSLLRPLHGP--DLEIGTVDGMQGREKEAVIISMVRSNDKREVGFL 656
Query: 584 SDRRRMNVAVTRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAEYLSG 631
++RRMNVA+TRA+RQ C+V D+ TV+ G +LK + + E HA+ G
Sbjct: 657 KEKRRMNVAMTRAKRQLCVVGDSGTVAYGGTYLKEWLAWLEAHADVRYG 705
>gi|340520219|gb|EGR50456.1| predicted protein [Trichoderma reesei QM6a]
Length = 652
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 255/647 (39%), Positives = 371/647 (57%), Gaps = 77/647 (11%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
+ + F + L+D E ++EI + + ++ + Q+ G I NL +TGL GKT
Sbjct: 7 IDVPSFAATQLALLDQELQSEIQETSSLISNHSPTGLQRAGLAITNLTISSQRTGLGGKT 66
Query: 73 LLEF-----QSTKGDVLPAHKFGTHDVVVLKPNKADLGSPAL----------GQGVVYRL 117
+LE S+ G+ LP H T D+V++ A GS +GVV R+
Sbjct: 67 VLELGPDGATSSTGE-LPEHGIRTGDIVLVAEQPA--GSAKKREVKELERKGARGVVTRV 123
Query: 118 KDSSITVAFDDIPEEGLNSP-LRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLF 176
+ ++++VA D+ +E L S + + KLA+EVTYRRM + +L K + + I VLF
Sbjct: 124 QRAAVSVALDEGKDEVLFSGRVWMVKLADEVTYRRMNQTMEKLQK-MGEAEYSSFIRVLF 182
Query: 177 GEQKPTVLKKDIA-------FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTV 229
G P+ + D+A + + L+ SQKDAI AL+S+ V ++HGPPGTGKT T+
Sbjct: 183 GLSSPSPVPSDLAASEEVGSIEWVDPTLNDSQKDAIRFALASREVALIHGPPGTGKTHTL 242
Query: 230 VEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQV 289
+E+ILQ +KR +IL C SNI+VDNIVERL PH+V ++RLGHPARLLP VL +LD
Sbjct: 243 IELILQMIKRNQRILVCGPSNISVDNIVERLAPHKVPILRLGHPARLLPSVLNHSLDVLT 302
Query: 290 LRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKN 349
+ ++ D+R EM A + KTK R+ I +L+ L KE R+R++ V++++
Sbjct: 303 QTSEAGAIIKDVRAEMDAKQASIKKTKSGRERKAIYTDLKELRKEYRERERRCVSNLVGG 362
Query: 350 ADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTV 409
+ VVL TL GA +L N FD+VIIDEA+QALE CW+ LL + + AGDHLQLPPT+
Sbjct: 363 SKVVLATLHGAGGYQLRNEEFDVVIIDEASQALEAQCWVPLLSAKKAVCAGDHLQLPPTI 422
Query: 410 QSVEAE-----KKG-----------------LGRTLFERLADLYGDEVTSMLTVQYRMHE 447
+S+ ++ KKG L TLF+RL L+G + MLT QYRMHE
Sbjct: 423 KSLNSKMKPKSKKGVDGDAAAAAAPVIKGMTLETTLFDRLLALHGPSIKRMLTTQYRMHE 482
Query: 448 HIMNWSSKQLYNSKIKAHPSGVKR------------TSSTEPTLLLIDIAGCDMEEKKDE 495
IM + S +LY+SK+ A + R +TEP ++ ID G D E+ ++
Sbjct: 483 KIMRFPSDELYDSKLIAADAVKARLLRDLDYDVESNEDTTEP-VIFIDTQGGDFPERNED 541
Query: 496 ED------------STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRS 543
+D S NE EA + H K+L+++GV DI ++TPY AQ+ L L+
Sbjct: 542 DDKENPKRGSLHGESKSNEMEAALVRLHVKQLVEAGVRPEDIAVVTPYNAQLAALASLK- 600
Query: 544 KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
+K +E+ +VDGFQGREKEA+I+S+VRSN EVGFL ++RR+N
Sbjct: 601 --EKFPGIELGSVDGFQGREKEAVIVSLVRSNPDGEVGFLGEKRRLN 645
>gi|336274090|ref|XP_003351799.1| hypothetical protein SMAC_00344 [Sordaria macrospora k-hell]
gi|380096080|emb|CCC06127.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 712
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 263/698 (37%), Positives = 374/698 (53%), Gaps = 88/698 (12%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
V + F S L+ E AEI+ + + Q+ G + NL +TG GKT
Sbjct: 7 VDIPSFASTQLTLLSSELAAEIAETSELVGAHTPTALQRAGLALTNLVVNAQRTGYGGKT 66
Query: 73 LLEFQSTKGDV----------------LPAHKFGTHDVVVLKPNKA---------DLGSP 107
+LE V LP H T D+V++ A +L
Sbjct: 67 VLELGPDSATVIASSGNPPKGGYDGPELPEHGIRTGDIVLVSEQPAGSAKRREVRELEKK 126
Query: 108 ALGQGVVYRLKDSSITVAFDDIPEEGLNSPLR--------LEKLANEVTYRRMKDALIQL 159
V + +D EE + + KLA++VTYRRM + +L
Sbjct: 127 GAKGVVTRVGRGVVGVALDEDKGEENVVGAGGVGGSGRVWMVKLADDVTYRRMNGTMEKL 186
Query: 160 SKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKP-------FNSNLDHSQKDAISKALSSK 212
K + + I VLFG+ P+ + D+ P + L+ SQKDAI AL+S+
Sbjct: 187 QK-MSESEHSMFIRVLFGQSSPSPVPADLINDPEVGNIEWVDPTLNDSQKDAIRFALASR 245
Query: 213 NVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGH 272
+ ++HGPPGTGKT T++E+ILQ ++R +IL C SNI+VDNIVERL PH++ ++RLGH
Sbjct: 246 EIALIHGPPGTGKTHTLIELILQLLRRDLRILVCGPSNISVDNIVERLSPHKLPILRLGH 305
Query: 273 PARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLS 332
PARLLP VL +LD D ++ D+R EM A + KT++ RR + EL+ L
Sbjct: 306 PARLLPSVLSHSLDVLTTTSDAGAIVKDVRAEMDAKQASIRKTRNGRERRVVYTELKELR 365
Query: 333 KEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLK 392
KE R+R++ V+D++ + VVL TL GA L N FD+VIIDEA+QALE CW+ LL
Sbjct: 366 KEYRERERRCVSDLVGRSKVVLATLHGAGGYHLKNEEFDVVIIDEASQALEAQCWVPLLW 425
Query: 393 GSRCILAGDHLQLPPTVQSVEAE-KKG---------LGRTLFERLADLYGDEVTSMLTVQ 442
+ +LAGDHLQLPPT++S+ ++ KG L TLF+RL L+G + MLT Q
Sbjct: 426 AKKAVLAGDHLQLPPTIKSLNSKASKGDQPKERGPTLETTLFDRLLALHGPAIKRMLTTQ 485
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKR------------TSSTEPTLLLIDIAGCDME 490
YRMHE IM + S +LY SK+ A +R +TEP L+ ID G D
Sbjct: 486 YRMHEKIMRFPSDELYESKLVAAEHVRERLLKDLLYEVEDNDDTTEP-LVFIDTQGGDFP 544
Query: 491 EKKDEE--------------------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITP 530
EK +EE +S NE EA + H + L+++GV DI ++TP
Sbjct: 545 EKNEEELDNNGSATDKKKAIKRSLHGESKSNEMEAALVKQHVRSLVEAGVRPEDIAVVTP 604
Query: 531 YAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
Y AQ+ +L L+ D+ +E+ +VDGFQGREKEA+I S+VRSN + VGFL ++RR+N
Sbjct: 605 YNAQLSILAPLK---DEFPGIELGSVDGFQGREKEAVIFSLVRSNDEGAVGFLGEKRRLN 661
Query: 591 VAVTRARRQCCLVCDTETV-SSDGFLKRLIEYFEEHAE 627
VA+TR +R ++ D+ETV FLKR +E+ EE+A+
Sbjct: 662 VAMTRPKRSLTVIGDSETVKKGSAFLKRWMEFLEENAD 699
>gi|358375281|dbj|GAA91865.1| DNA helicase [Aspergillus kawachii IFO 4308]
Length = 733
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 238/567 (41%), Positives = 341/567 (60%), Gaps = 60/567 (10%)
Query: 116 RLKDSSITVAF-----------DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQ 164
R+ +S++ VAF +D EE + + KLAN+VTYRRM + +L K +
Sbjct: 162 RVGESAVWVAFGGKDSGKGSKDEDGVEELWGRKVWMIKLANDVTYRRMNQTMEKLVK-MT 220
Query: 165 NGPAAGLIPVLFGEQKPTVLKKDIAFKPF---NSNLDHSQKDAISKALSSKNVFMLHGPP 221
+ + V FG+ P + D + P + L+ SQK+AI AL+++ + ++HGPP
Sbjct: 221 DSEHTHFMRVAFGQTSPMLPDYD-SIGPLEFTDPTLNDSQKEAIRFALAAREIALIHGPP 279
Query: 222 GTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVL 281
GTGKT T++E+I+Q V+R ++L C SNI+VDNIVERL P +V +VR+GHPARLLP VL
Sbjct: 280 GTGKTHTLIELIVQMVQRKQRVLVCGPSNISVDNIVERLAPKKVPVVRIGHPARLLPSVL 339
Query: 282 ESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQL 341
+ +L+ + + + D+RKE+ + KT+ RR I +LR L +E R+R+
Sbjct: 340 DHSLEVLTHTSEAAEIVRDVRKEIDQKQASIRKTRSARERRAIYDDLRELRREFRERENK 399
Query: 342 AVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGD 401
V ++++ + VVL TL GA +L N FD+VIIDEA+QALE CWI LL S+ +LAGD
Sbjct: 400 CVENLVRESSVVLATLHGAGGHQLKNQKFDVVIIDEASQALEAQCWIPLLSASKVVLAGD 459
Query: 402 HLQLPPTVQSV----------EAEKKGLGR---------TLFERLADLYGDEVTSMLTVQ 442
HLQLPPTV+S E +KK G TLF+RL ++G + MLT Q
Sbjct: 460 HLQLPPTVKSTKDDVRKMKAKEEDKKENGELLDNVSLETTLFDRLLSMHGPGIKRMLTTQ 519
Query: 443 YRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLIDIAGCDMEE 491
YRMHE IM + S +LY+SK+ A P V+ T T+ L+ D G D E
Sbjct: 520 YRMHEKIMQFPSDELYDSKLMAADTVKARLLKDLPYEVEETDDTKEPLVFWDTQGGDFPE 579
Query: 492 KKDEE---------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQV-VLLKIL 541
K ++ DS N+ EA V H L+ +G+H DI +ITPY Q+ VL ++L
Sbjct: 580 KTEDADLGKKAHLGDSKSNDMEALVVSRHVDALVDAGIHPEDIAVITPYNGQLAVLSQML 639
Query: 542 RSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
R +K ++E+ +VDGFQGREKEA+++S+VRSNS+ EVGFL +RRR+NVA+TR +R C
Sbjct: 640 R---EKYPSIELGSVDGFQGREKEAVVVSLVRSNSEHEVGFLGERRRLNVAMTRPKRHLC 696
Query: 602 LVCDTETVS-SDGFLKRLIEYFEEHAE 627
+ D+ET+S GFLKR + + EEHA+
Sbjct: 697 ICGDSETISKGSGFLKRWMAFLEEHAD 723
>gi|261204485|ref|XP_002629456.1| DNA helicase [Ajellomyces dermatitidis SLH14081]
gi|239587241|gb|EEQ69884.1| DNA helicase [Ajellomyces dermatitidis SLH14081]
gi|239614217|gb|EEQ91204.1| DNA helicase [Ajellomyces dermatitidis ER-3]
gi|327353693|gb|EGE82550.1| hypothetical protein BDDG_05494 [Ajellomyces dermatitidis ATCC
18188]
Length = 755
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 259/747 (34%), Positives = 393/747 (52%), Gaps = 134/747 (17%)
Query: 16 QEFVSVMAPLIDLEKEAEISAS-----------ITSGASRNLDTAQKKGSTILNLKCVDA 64
Q F L+ E EAE+S+S +++ R L A G + L V+
Sbjct: 16 QSFAQTQQQLLLAEHEAEVSSSPLSTSIAQSGGVSASTRRTLQVA---GYALTGLVLVNT 72
Query: 65 QTGLMGKTLLEF--QSTKGD--------------------VLPAHKFGTHDVVVL----- 97
+TG+ G+ + EF S G L AH D+V +
Sbjct: 73 RTGMGGREVGEFGVDSAIGSGARGGKDGEGAGGGGDGGAERLGAHGMRVGDIVRVEDVAA 132
Query: 98 -----------KPNKADLGSPALG-QGVVYRLKDSSITVAF------------DDIPEEG 133
K K + G +GVV R+ + S+ VAF ++ E+
Sbjct: 133 GARGGAGSGRAKGAKEEEGRKGRALEGVVTRVGERSVWVAFGGQGGAAGKGRDEESVEDL 192
Query: 134 LNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK----KDIA 189
+ + KLAN+VTYRRMK + ++ + + + V+FG P+ + I
Sbjct: 193 WGKKVWMVKLANDVTYRRMKQTMTKM-ENMTESDYTYFMRVVFGHTAPSPVDLSSLGTIE 251
Query: 190 FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAAS 249
F +S L+ SQ++A+ AL+S+ + ++HGPPGTGKT T++E+ILQ +++ +IL C S
Sbjct: 252 F--IDSTLNDSQREAVRFALASREIALIHGPPGTGKTYTLIELILQLLRQNLRILVCGPS 309
Query: 250 NIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALN 309
N++VDNIVERL PH+V LVR+GHPARLL VL+ +L+ + D +++ D+RK+++
Sbjct: 310 NVSVDNIVERLAPHKVPLVRIGHPARLLSTVLDHSLEVLIQTSDAAAIVKDVRKDIETKQ 369
Query: 310 GKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS 369
+ KT+ RREI ++L+ L KE R+R+ V +++ + VVL TL GA +L N
Sbjct: 370 ASIRKTRSGRERREIYRDLKELRKEFRERESKCVGNLVTESKVVLATLHGAGGHQLRNQK 429
Query: 370 FDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKG----------- 418
FD+VIIDEA+QALE CW+ LL S+ ILAGDHLQLPPT++SV ++ G
Sbjct: 430 FDVVIIDEASQALEAQCWVPLLSASKAILAGDHLQLPPTIKSVTSKSSGTVGNGMSASDE 489
Query: 419 ----------------------LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQ 456
L TLF+RL L+G + MLT QYRMHE IM + S++
Sbjct: 490 ISAPNADKGNNIGQHKATKKATLEMTLFDRLLSLHGPAIKRMLTTQYRMHEKIMQFPSQE 549
Query: 457 LYNSKIKAH-----------PSGVKRTSSTEPTLLLIDIAGCDMEEKKDEE--------- 496
LY +K+ A P V+ + T L+ D G D E+ +E
Sbjct: 550 LYEAKLIAADAVKLRLLKDLPYEVEESDDTREPLVFYDTQGGDFPERAEEPVVAAKQKQI 609
Query: 497 ----DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNME 552
+S N+ EA + H + L+ +GV DI ++TPY AQ+ LL + DK +E
Sbjct: 610 SMFVESKSNDLEAVLVGRHVENLVATGVKPEDIAVVTPYNAQLALLSNMLK--DKYPGLE 667
Query: 553 VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSD 612
+ +VDGFQGREKEA+++S+VRSN + EVGFL+++RR+NVA+TR +R C+ D+ET+
Sbjct: 668 LGSVDGFQGREKEAVVVSLVRSNPEHEVGFLAEKRRLNVAMTRPKRHLCVCGDSETIRRG 727
Query: 613 G-FLKRLIEYFEEHAE--YLSGSEYLN 636
FL+R +++ EE+A+ Y +Y+
Sbjct: 728 SQFLRRWMDFLEENADLRYPDAGDYMQ 754
>gi|46124979|ref|XP_387043.1| hypothetical protein FG06867.1 [Gibberella zeae PH-1]
Length = 685
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 253/660 (38%), Positives = 365/660 (55%), Gaps = 75/660 (11%)
Query: 9 KQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGL 68
K V + F + L+D E + EI+ + ++ + Q+ G + NL +TGL
Sbjct: 4 KLKPVDIPTFATTQLALLDQELQTEINETSDLISNHSPTALQRAGIALTNLVVSGQRTGL 63
Query: 69 MGKTLLEFQ----STKGDVLPAHKFGTHDVVVLKPNKA---------DLGSPALGQGVVY 115
G+T++E + D LP H T D+V++ A DL +GVV
Sbjct: 64 GGRTVVELSPDAATGSADELPEHGLRTGDIVLVAEQPAGSAKKREVKDLEKKG-ARGVVT 122
Query: 116 RLKDSSITVAFDDIPEE-GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPV 174
+++ ++VA D+ EE + KLA+EVTY+RM + +L+K + + L V
Sbjct: 123 KVRREWVSVAIDEGKEEVAFTGRVWAVKLADEVTYKRMNWTMEKLNK-MDESEYSSLTRV 181
Query: 175 LFGEQKPTVLKKDIA-------FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTT 227
LFG P+ + D+ F+ L+ SQKDAI AL+S+ V ++HGPPGTGKT
Sbjct: 182 LFGLSSPSPVATDLTKDESVGNLDWFDPTLNDSQKDAIRFALASREVALIHGPPGTGKTH 241
Query: 228 TVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDA 287
T++E+ILQ +K +IL C SNI+VDN+VERL PH+V ++RLGHPARLLP V++ +LD
Sbjct: 242 TLIELILQMIKLEQRILVCGPSNISVDNVVERLAPHKVPILRLGHPARLLPSVVDHSLDV 301
Query: 288 QVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVI 347
+ ++ DIR EM + KTK R+ I +L+ L KE R+R++ V+ +I
Sbjct: 302 LTQTSEAGTIVKDIRSEMDTKQASIKKTKSGKERKAIYNDLKELRKEFRERERRCVSTLI 361
Query: 348 KNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPP 407
+ VVL TL GA +L N FD+VIIDEA+QALE CW+ L+ + + AGDHLQLPP
Sbjct: 362 GGSKVVLATLHGAGGYQLRNEEFDVVIIDEASQALEAQCWVPLVSAKKVVCAGDHLQLPP 421
Query: 408 TVQSVEAEKKG-------------LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSS 454
T++S + K L TLF+RL L+G + MLT QYRMHE IM + S
Sbjct: 422 TIKSTNTKVKAPVKEGVKITKGATLEVTLFDRLLALHGPSIKRMLTTQYRMHESIMRFPS 481
Query: 455 KQLYNSKIKAHPS-----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEE------- 496
+LY+SK+ A + V+ T ++ ID G D EK +E+
Sbjct: 482 DELYDSKLIAADAVKHRLLKDLEYEVEDNEDTSEPVIFIDTQGGDFPEKNEEDDKDTPKK 541
Query: 497 -------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK 549
DS NE EA + H K+L+ +GV DI ++TPY AQ+ +L L+ DK
Sbjct: 542 GKASLHGDSKSNEMEAALVQQHVKQLVAAGVRPEDIAVVTPYNAQLAVLAPLK---DKFP 598
Query: 550 NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
+E+ +VDGFQGREKEA+I+S+VRSNS+ EVGFL +RRR+NV + D+ETV
Sbjct: 599 GIELGSVDGFQGREKEAVIVSLVRSNSEGEVGFLGERRRLNV-----------IGDSETV 647
>gi|317037841|ref|XP_001402440.2| DNA helicase [Aspergillus niger CBS 513.88]
Length = 714
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/563 (41%), Positives = 337/563 (59%), Gaps = 58/563 (10%)
Query: 119 DSSITVAF-----------DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGP 167
+S++ VAF +D EE + + KLAN+VTYRRM + ++ K ++
Sbjct: 146 ESAVWVAFGGKDGGKGKDAEDGVEELWGRKVWMIKLANDVTYRRMNQTMEKMVKMAES-E 204
Query: 168 AAGLIPVLFGEQKPTVLKKDI--AFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGK 225
+ V FG P + D A + + L+ SQK+AI AL+++ + ++HGPPGTGK
Sbjct: 205 HTHFMRVAFGHTSPMLPDYDSIGALEFTDPTLNDSQKEAIRFALAAREIALIHGPPGTGK 264
Query: 226 TTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESAL 285
T T++E+I+Q V+R ++L C SNI+VDNIVERL P +V +VR+GHPARLLP VL+ +L
Sbjct: 265 THTLIELIVQMVQRKQRVLVCGPSNISVDNIVERLAPKKVPVVRIGHPARLLPSVLDHSL 324
Query: 286 DAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTD 345
+ + +++ D+RKE+ + KT+ RR I +LR L +E R+R+ V +
Sbjct: 325 EVLTHTSEAAAIVRDVRKEIDQKQASIRKTRAARERRAIYDDLRELRREFRERENKCVEN 384
Query: 346 VIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQL 405
+++ + VVL TL GA +L N FD+VIIDEA+QALE CWI LL S+ +LAGDHLQL
Sbjct: 385 LVRESSVVLATLHGAGGHQLKNQKFDVVIIDEASQALEAQCWIPLLSASKVVLAGDHLQL 444
Query: 406 PPTVQSVEA-------------------EKKGLGRTLFERLADLYGDEVTSMLTVQYRMH 446
PPTV+S + E L TLF+RL ++G + MLT QYRMH
Sbjct: 445 PPTVKSTKENAKKAAKEKEDKKENGELLENVSLETTLFDRLLSMHGPGIKRMLTTQYRMH 504
Query: 447 EHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLIDIAGCDMEEKKDE 495
E IM + S +LY+SK+ A P V+ T T+ L+ D G D EK ++
Sbjct: 505 EKIMQFPSDELYDSKLMAADSVKDRLLKDLPYEVEETDDTKEPLVFWDTQGGDFPEKTED 564
Query: 496 ED---------STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQV-VLLKILRSKD 545
D S N+ EA V H L+ +G+H DI +ITPY Q+ VL ++LR
Sbjct: 565 ADLGKKAHLGESKSNDMEALVVSRHVDALVDAGIHPEDIAVITPYNGQLAVLSQMLR--- 621
Query: 546 DKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCD 605
+K ++E+ +VDGFQGREKEA+++S+VRSNS+ EVGFL +RRR+NVA+TR +R C+ D
Sbjct: 622 EKYPSIELGSVDGFQGREKEAVVVSLVRSNSEHEVGFLGERRRLNVAMTRPKRHLCICGD 681
Query: 606 TETVS-SDGFLKRLIEYFEEHAE 627
+ET+S GFLKR + + EEHA+
Sbjct: 682 SETISKGSGFLKRWMAFLEEHAD 704
>gi|350633858|gb|EHA22222.1| DNA helicase [Aspergillus niger ATCC 1015]
Length = 721
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/563 (41%), Positives = 337/563 (59%), Gaps = 58/563 (10%)
Query: 119 DSSITVAF-----------DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGP 167
+S++ VAF +D EE + + KLAN+VTYRRM + ++ K ++
Sbjct: 153 ESAVWVAFGGKDGGKGKDAEDGVEELWGRKVWMIKLANDVTYRRMNQTMEKMVKMAES-E 211
Query: 168 AAGLIPVLFGEQKPTVLKKDI--AFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGK 225
+ V FG P + D A + + L+ SQK+AI AL+++ + ++HGPPGTGK
Sbjct: 212 HTHFMRVAFGHTSPMLPDYDSIGALEFTDPTLNDSQKEAIRFALAAREIALIHGPPGTGK 271
Query: 226 TTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESAL 285
T T++E+I+Q V+R ++L C SNI+VDNIVERL P +V +VR+GHPARLLP VL+ +L
Sbjct: 272 THTLIELIVQMVQRKQRVLVCGPSNISVDNIVERLAPKKVPVVRIGHPARLLPSVLDHSL 331
Query: 286 DAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTD 345
+ + +++ D+RKE+ + KT+ RR I +LR L +E R+R+ V +
Sbjct: 332 EVLTHTSEAAAIVRDVRKEIDQKQASIRKTRAARERRAIYDDLRELRREFRERENKCVEN 391
Query: 346 VIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQL 405
+++ + VVL TL GA +L N FD+VIIDEA+QALE CWI LL S+ +LAGDHLQL
Sbjct: 392 LVRESSVVLATLHGAGGHQLKNQKFDVVIIDEASQALEAQCWIPLLSASKVVLAGDHLQL 451
Query: 406 PPTVQSVEA-------------------EKKGLGRTLFERLADLYGDEVTSMLTVQYRMH 446
PPTV+S + E L TLF+RL ++G + MLT QYRMH
Sbjct: 452 PPTVKSTKENAKKAAKEKEDKKENGELLENVSLETTLFDRLLSMHGPGIKRMLTTQYRMH 511
Query: 447 EHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLIDIAGCDMEEKKDE 495
E IM + S +LY+SK+ A P V+ T T+ L+ D G D EK ++
Sbjct: 512 EKIMQFPSDELYDSKLMAADSVKDRLLKDLPYEVEETDDTKEPLVFWDTQGGDFPEKTED 571
Query: 496 ED---------STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQV-VLLKILRSKD 545
D S N+ EA V H L+ +G+H DI +ITPY Q+ VL ++LR
Sbjct: 572 ADLGKKAHLGESKSNDMEALVVSRHVDALVDAGIHPEDIAVITPYNGQLAVLSQMLR--- 628
Query: 546 DKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCD 605
+K ++E+ +VDGFQGREKEA+++S+VRSNS+ EVGFL +RRR+NVA+TR +R C+ D
Sbjct: 629 EKYPSIELGSVDGFQGREKEAVVVSLVRSNSEHEVGFLGERRRLNVAMTRPKRHLCICGD 688
Query: 606 TETVS-SDGFLKRLIEYFEEHAE 627
+ET+S GFLKR + + EEHA+
Sbjct: 689 SETISKGSGFLKRWMAFLEEHAD 711
>gi|325189317|emb|CCA23837.1| DNA polymerase alphaassociated DNA helicase A putati [Albugo
laibachii Nc14]
Length = 931
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 242/657 (36%), Positives = 370/657 (56%), Gaps = 85/657 (12%)
Query: 58 NLKCVDAQTGLMGKTLLEFQSTKGD-VLPAHKFGTHDVVVLKPNKA---DLGSPALGQGV 113
+L+ V + GL G+T+ + AH F D+V ++ + + + V
Sbjct: 45 HLQLVQSSLGLFGRTVWTLALPRWHWTTKAHAFSIGDIVRIRNASSTSDKIQTTNQCTSV 104
Query: 114 VYRLKDSSITVAFDDIPEE-------GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNG 166
V +L++ I +A E G + +++L N TY ++ L + KG +
Sbjct: 105 VTKLEEFCIHIAMQASDSETKSESDIGGRGAITVDRLVNTTTYSKLSATLEGICKG--DH 162
Query: 167 PAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKT 226
P LI +LF Q P + + PFN +L+ SQ ++I AL+SK++ ++HGPPGTGKT
Sbjct: 163 P---LISILFENQLPQ-WSESRSIDPFNPHLNTSQLESIKLALASKDIAIIHGPPGTGKT 218
Query: 227 TTVVEIILQEV-KRGSKILACAASNIAVDNIVERL--VP----HRVRLVRLGHPARLLPQ 279
TT+VE+ILQ V K+L CA SNIAVD ++E+L P ++VRL+R+GHPAR+
Sbjct: 219 TTIVELILQAVIHNKQKVLVCAPSNIAVDTVLEKLSQCPAISQYKVRLLRIGHPARVTAN 278
Query: 280 VLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRR---------EIQKELRT 330
VL+ DAQV +N+++ DIR E++ + + ++K ++ ++ K +R+
Sbjct: 279 VLQHCFDAQVSNAENTAIVDDIRMEIQQMERTITNIREKARKQKRTQTGQTCDLYKLIRS 338
Query: 331 LSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIAL 390
KE KR++ + ++++ + V+ T GA ++ L + FD+ IIDEAAQALE++CWI +
Sbjct: 339 NRKEIHKRERNVIQNLLQQSHVIFATNMGASTKLLKDIKFDIAIIDEAAQALEVSCWIPI 398
Query: 391 LKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERL---ADLYGDE-VTSMLTVQYRMH 446
+K R +LAGDH QLPPT++S +A + GL TLF+RL A + G E + ML +QYRMH
Sbjct: 399 MKAKRVVLAGDHCQLPPTIKSRKAAEDGLQVTLFDRLMERAKMRGFEGIVKMLDIQYRMH 458
Query: 447 EHIMNWSSKQLYNSKIKAH-------------------------PSGVKRT--SSTEPTL 479
+ I WSS +Y S +K+ P GV + S TL
Sbjct: 459 DDICRWSSDAMYQSALKSFEGVAARTLQDLGTFVRHENEVFVTLPEGVFQVDPSVLGATL 518
Query: 480 LLIDIAGCDMEEKKDEED-------------------STMNEGEAEVAMAHAKRLIQSGV 520
L+D AGCD+ E+K++ D S N GEA + H + L+Q+G+
Sbjct: 519 YLLDTAGCDLNEEKEQVDTSKFKKDKDARDIASVLSCSKSNPGEALLVDIHVRSLVQAGI 578
Query: 521 HASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEV 580
A DI +ITPY QV +LK S + ++E+ +VDGFQG EKEA+++S+VRSN K E
Sbjct: 579 PAHDIAVITPYNKQVQVLKSRLS--EAFPSLEIRSVDGFQGCEKEAVVMSLVRSNKKHEA 636
Query: 581 GFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
GFL+D RRMNVAVTRA+R L+CD+ET+S+ FL+ L+++FE E +E L+E
Sbjct: 637 GFLADERRMNVAVTRAKRHVALICDSETISAHSFLRNLVQHFEAFGEVRFATEILSE 693
>gi|367044056|ref|XP_003652408.1| hypothetical protein THITE_2047968 [Thielavia terrestris NRRL 8126]
gi|346999670|gb|AEO66072.1| hypothetical protein THITE_2047968 [Thielavia terrestris NRRL 8126]
Length = 728
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 260/681 (38%), Positives = 374/681 (54%), Gaps = 108/681 (15%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEF---------------------QSTKGDVLPAHK 88
Q+ G + NL +TGL G+T+LE + K + LP H
Sbjct: 40 QRAGVALTNLVVAAQRTGLGGRTVLELARDPALGVAGGGKGGGGAGGREQGKENELPEHG 99
Query: 89 FGTHDVVVLKPNKA---------DLGSPALGQGVVYRLKDSSITVAFDDIPEE------- 132
T D+V+L + +L + +GVV R+ ++ + VA D+ E+
Sbjct: 100 IRTGDIVLLSEQPSGQARKREVRELERRGV-KGVVTRVGNAVVAVAVDEKAEDREGDGSG 158
Query: 133 GLNSPLRLEK------LANEVTYR-RMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK 185
G+ + L EK +A++VT+R RM + +L+K + + I VLFG P+ +
Sbjct: 159 GVGALLSGEKRVWIVKVADDVTFRSRMNATMERLAK-MGEAEYSPFIRVLFGLSSPSPVP 217
Query: 186 KDIAFKP-------FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK 238
D++ P + L+ SQKDAI AL+S+ + ++HGPPGTGKT T++E+ILQ +K
Sbjct: 218 ADLSRDPEVGEIEWVDPTLNDSQKDAIRFALASREIALIHGPPGTGKTHTLIELILQLLK 277
Query: 239 RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLA 298
R +IL C SNI+VDNIVERL PH+V L+RLGHPARLLP VL +LD + ++
Sbjct: 278 RNQRILVCGPSNISVDNIVERLAPHKVPLIRLGHPARLLPSVLNHSLDVLTRTSEAGAIV 337
Query: 299 SDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLT 358
D+R EM A + KT++ RR I +L+ L KE R+R++ V+D++ + VVL TL
Sbjct: 338 KDVRAEMDAKQASIRKTRNAKERRAIYADLKELRKEYRERERRCVSDLVAGSKVVLATLH 397
Query: 359 GAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSV------ 412
G+ +L + FD+VIIDEA+QALE CW+ALL + I AGDHLQLPPT++S+
Sbjct: 398 GSGGFQLRDEQFDVVIIDEASQALEAQCWVALLAAKKAICAGDHLQLPPTIKSLNSKMTK 457
Query: 413 --------------EAEKKG--LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQ 456
E KG L TLF+RL L+G + MLT QYRMHE IM + S +
Sbjct: 458 PSSTKGKDAAAAADEPTIKGATLETTLFDRLLKLHGPSIKRMLTTQYRMHEKIMRFPSDE 517
Query: 457 LYNSKIKAH-----------PSGVKRTSSTEPTLLLIDIAGCDMEEKKDEE--------- 496
LY K+ A P V T T L+ ID G D EK ++E
Sbjct: 518 LYEGKLIAADAVKARLLRDLPYEVADTDDTTEPLVFIDTQGGDFPEKNEDEQQDAAGGGK 577
Query: 497 ---------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDK 547
DS NE EA + H +RL+ +GV DI ++TPY AQ+ +L L+ +
Sbjct: 578 KLTKSSLYGDSKSNEMEAALVRQHVRRLVDAGVKPEDIAVVTPYNAQLAILAPLK---EM 634
Query: 548 LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTE 607
+E+ +VDGFQGREKEA+I+S+VRSN+ EVGFL ++RR+NVA+TR +R ++ D+E
Sbjct: 635 FPGIELGSVDGFQGREKEAVIVSLVRSNADGEVGFLGEKRRLNVAMTRPKRSLTVIGDSE 694
Query: 608 TVSSDG-FLKRLIEYFEEHAE 627
TV FLK + + EE+A+
Sbjct: 695 TVKKGSKFLKDWMNFLEENAD 715
>gi|225559206|gb|EEH07489.1| helicase [Ajellomyces capsulatus G186AR]
Length = 732
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 258/734 (35%), Positives = 384/734 (52%), Gaps = 113/734 (15%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLD--------TAQKKGSTILNLKCV 62
+ + +Q F L+ E EAEI++S S + D T Q G ++ L +
Sbjct: 3 TPIPIQAFAQAQTELLLAEHEAEIASSPLSASIAQSDGISASTRRTLQAAGYALIGLVLI 62
Query: 63 DAQTGLMGKTLLEF----------------------QSTKGDVLPAHKFGTHDVVVLK-- 98
+ +TG+ G+ + EF L AH DVV ++
Sbjct: 63 NCRTGMGGREVGEFGVDSAIGSGARGGKDSNGDGGNGDGGAQRLGAHGMRVGDVVRVEDV 122
Query: 99 ------------PNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANE 146
+K + +GVV R+ + SI VAF G R E+ +
Sbjct: 123 AAGTRGGGGRARGSKEEERKDKAPEGVVTRVGERSIWVAFGGQRVAGGKG--RDEESVED 180
Query: 147 VTYRR---MKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK-KDIAFKPF-NSNLDHSQ 201
+ ++ MK + +L ++ + V+FG P+ + I F + L+ SQ
Sbjct: 181 LWGKKVWMMKQTMAKLGSMTESDYTY-FMRVVFGHSTPSPVDLSSIGTIEFIDPTLNDSQ 239
Query: 202 KDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLV 261
++AI AL++K + ++HGPPGTGKT T++E+ILQ +++ +IL C SN++VDNIVERL
Sbjct: 240 REAIRFALAAKEIALIHGPPGTGKTYTLIELILQFLRQNLRILVCGPSNVSVDNIVERLA 299
Query: 262 PHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTR 321
PH+V LVR+GHPARLL VL+ +L+ + D +++ DIRKE++ + KT+ R
Sbjct: 300 PHKVPLVRIGHPARLLSTVLDHSLEVLIQTSDAAAIVKDIRKEIEVKQASIRKTRSGRER 359
Query: 322 REIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQA 381
REI ++L+ L KE R+R+ V +++ + VVL TL GA +L N FD+VIIDEA+QA
Sbjct: 360 REIYRDLKELRKEFRERESKCVGNLVTDCKVVLATLHGAGGHQLRNQKFDVVIIDEASQA 419
Query: 382 LEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKG----------------------- 418
LE CW+ LL S+ ILAGDHLQLPPTV+S + G
Sbjct: 420 LEAQCWVPLLSASKAILAGDHLQLPPTVKSATLKFSGAVGSGKSPDDEQSVLRMDKDNNV 479
Query: 419 ---------LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH---- 465
L TLF+RL L+G + MLT QYRMHE IM + S++LY SK+ A
Sbjct: 480 GQHKAKGGTLEMTLFDRLLSLHGPAIKRMLTTQYRMHEKIMQFPSQELYESKLIAADAVK 539
Query: 466 -------PSGVKRTSSTEPTLLLIDIAGCDMEEKKDEE-------------DSTMNEGEA 505
P V+ T T L+ D G D EK +E +S N+ EA
Sbjct: 540 LRLLKDLPYEVEETDDTREPLVFYDTQGGDFPEKVEEPAVMPKQKQISLFAESKSNDMEA 599
Query: 506 EVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKE 565
+ H + LI +GV D+ ++TPY AQ+ LL + DK +E+ +VDGFQGREKE
Sbjct: 600 YLVARHVENLIGAGVKPEDVAVVTPYNAQLALLSSMLK--DKYPGLELGSVDGFQGREKE 657
Query: 566 AIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV-SSDGFLKRLIEYFEE 624
A+I+S+VRSN + EVGFL+++RR+NVA+TR +R C+ D+ET+ + FL+R +++ EE
Sbjct: 658 AVIVSLVRSNPEHEVGFLAEKRRLNVAMTRPKRHLCICGDSETIRGGNQFLRRWMDFLEE 717
Query: 625 HAE--YLSGSEYLN 636
+A+ Y EY+
Sbjct: 718 NADLRYPDAGEYMQ 731
>gi|325088278|gb|EGC41588.1| helicase [Ajellomyces capsulatus H88]
Length = 732
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 259/734 (35%), Positives = 384/734 (52%), Gaps = 113/734 (15%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLD--------TAQKKGSTILNLKCV 62
+ + +Q F L+ E EAEI++S S + D T Q G ++ L +
Sbjct: 3 TPIPIQAFAQAQTELLLAEHEAEIASSPLSASIAQSDGISASTRRTLQAAGYALIGLVLI 62
Query: 63 DAQTGLMGKTLLEF----------------------QSTKGDVLPAHKFGTHDVVVLK-- 98
+ +TG+ G+ + EF L AH DVV ++
Sbjct: 63 NCRTGMGGREVGEFGVDSAIGFGARGGKDSNGDGGNGDGGAQRLGAHGMRVGDVVRVEDV 122
Query: 99 ------------PNKADLGSPALGQGVVYRLKDSSITVAFDD---IPEEGLNSPLRLEKL 143
+K + +GVV R+ + SI VAF +G N +E L
Sbjct: 123 AAGTRGGGGRARGSKEEERKEKALEGVVTRVGERSIWVAFGGQRVAGGKGRNEE-SVEDL 181
Query: 144 ANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK-KDIAFKPF-NSNLDHSQ 201
+ + MK + +L ++ + V+FG P+ + I F + L+ SQ
Sbjct: 182 WGKKVWM-MKQTMAKLGSMTESDYTY-FMRVVFGHSTPSPVDLSSIGTIEFIDPTLNDSQ 239
Query: 202 KDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLV 261
++AI AL++K + ++HGPPGTGKT T++E+ILQ +++ +IL C SN++VDNIVERL
Sbjct: 240 REAIRFALAAKEIALIHGPPGTGKTYTLIELILQFLRQNLRILVCGPSNVSVDNIVERLA 299
Query: 262 PHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTR 321
PH+V LVR+GHPARLL VL+ +L+ + D +++ DIRKE++ + KT+ R
Sbjct: 300 PHKVPLVRIGHPARLLSTVLDHSLEVLIQTSDAAAIVKDIRKEIEVKQASIRKTRSGRER 359
Query: 322 REIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQA 381
REI ++L+ L KE R+R+ V +++ + VVL TL GA +L N FD+VIIDEA+QA
Sbjct: 360 REIYRDLKELRKEFRERESKCVGNLVTDCKVVLATLHGAGGHQLRNQKFDVVIIDEASQA 419
Query: 382 LEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKG----------------------- 418
LE CW+ LL S+ ILAGDHLQLPPTV+S + G
Sbjct: 420 LEAQCWVPLLSASKAILAGDHLQLPPTVKSATLKFSGAVGNGKSPDDEQSVLRMDKDNNV 479
Query: 419 ---------LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH---- 465
L TLF+RL L+G + MLT QYRMHE IM + S++LY SK+ A
Sbjct: 480 GQHKAKGGTLEMTLFDRLLSLHGPAIKRMLTTQYRMHEKIMQFPSQELYESKLIAADAVK 539
Query: 466 -------PSGVKRTSSTEPTLLLIDIAGCDMEEKKDEE-------------DSTMNEGEA 505
P V+ T T L+ D G D EK +E +S N+ EA
Sbjct: 540 LRLLKDLPYEVEETDDTREPLVFYDTQGGDFPEKVEEPAVMPKQKQISLFAESKSNDMEA 599
Query: 506 EVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKE 565
+ H + LI +GV D+ ++TPY AQ+ LL + DK +E+ +VDGFQGREKE
Sbjct: 600 YLVARHVENLIGAGVKPEDVAVVTPYNAQLALLSSMLK--DKYPGLELESVDGFQGREKE 657
Query: 566 AIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV-SSDGFLKRLIEYFEE 624
A+I+S+VRSN + EVGFL+++RR+NVA+TR +R C+ D+ET+ + FL+R +++ EE
Sbjct: 658 AVIVSLVRSNPEHEVGFLAEKRRLNVAMTRPKRHLCICGDSETIRGGNQFLRRWMDFLEE 717
Query: 625 HAE--YLSGSEYLN 636
+A+ Y EY+
Sbjct: 718 NADLRYPDAGEYMQ 731
>gi|408388301|gb|EKJ67987.1| hypothetical protein FPSE_11798 [Fusarium pseudograminearum CS3096]
Length = 652
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 249/645 (38%), Positives = 359/645 (55%), Gaps = 64/645 (9%)
Query: 9 KQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGL 68
K V + F + L+D E + EI+ + ++ + Q+ G + NL +TGL
Sbjct: 4 KLKPVDIPTFATTQLALLDQELQTEINETSDLISNHSPTALQRAGIALTNLVVSGQRTGL 63
Query: 69 MGKTLLEFQ----STKGDVLPAHKFGTHDVVVLKPNKA---------DLGSPALGQGVVY 115
G+T++E + D LP H T D+V++ A DL +GVV
Sbjct: 64 GGRTVVELSPDAATGSADELPEHGLRTGDIVLVAEQPAGSAKKREVKDLEKKG-ARGVVT 122
Query: 116 RLKDSSITVAFDDIPEE-GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPV 174
+++ ++VA D+ EE + KLA+EVTY+RM + +L+K + + L V
Sbjct: 123 KVRREWVSVAIDEGKEEVAFTGRVWAVKLADEVTYKRMNWTMEKLNK-MNESEYSSLTRV 181
Query: 175 LFGEQKPTVLKKDIA-------FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTT 227
LFG P+ + D+ F+ L+ SQKDAI AL+S V ++HGPPGTGKT
Sbjct: 182 LFGLSSPSPVAADLTKDESVGNLDWFDPTLNESQKDAIRFALASLEVALIHGPPGTGKTH 241
Query: 228 TVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDA 287
T++E+ILQ ++ +IL C SNI+VDN+VERL PH+V ++RLGHPARLLP V++ +LD
Sbjct: 242 TLIELILQMIRLEQRILVCGPSNISVDNVVERLAPHKVPILRLGHPARLLPSVVDHSLDV 301
Query: 288 QVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVI 347
+ ++ DIR EM + KTK R+ I +L+ L KE R+R++ V+ +I
Sbjct: 302 LTQTSEAGAIVKDIRTEMDTKQASIKKTKSGKERKAIYNDLKELRKEFRERERRCVSTLI 361
Query: 348 KNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPP 407
+ VVL TL GA +L N FD+VIIDEA+QALE CW+ L+ + + AGDHLQLPP
Sbjct: 362 GGSKVVLATLHGAGGYQLRNEEFDVVIIDEASQALEAQCWVPLVSAKKVVCAGDHLQLPP 421
Query: 408 TVQSVEAEKKG-------------LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSS 454
T++S + K L TLF+RL L+G + MLT QYRMHE IM + S
Sbjct: 422 TIKSTNTKVKAPVKEGVEITKGATLEVTLFDRLLALHGPSIKRMLTTQYRMHESIMRFPS 481
Query: 455 KQLYNSKIKAHPS-----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEE------- 496
+LY+SK+ A + V+ T ++ ID G D EK +E+
Sbjct: 482 DELYDSKLIAADAVKHRLLKDLEYEVEDNEDTNEPVIFIDTQGGDFPEKNEEDDKDTPKK 541
Query: 497 -------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK 549
DS NE EA + H K+L+ +GV DI ++TPY AQ+ +L L+ DK
Sbjct: 542 GKASLHGDSKSNEMEAALVQQHVKKLVAAGVRPEDIAVVTPYNAQLAVLAPLK---DKFP 598
Query: 550 NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
+E+ +VDGFQGREKEA+I+S+VRSNS+ EVGFL +RRR+N VT
Sbjct: 599 GIELGSVDGFQGREKEAVIVSLVRSNSEGEVGFLGERRRLNGKVT 643
>gi|406836754|ref|ZP_11096348.1| AAA ATPase [Schlesneria paludicola DSM 18645]
Length = 628
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 241/599 (40%), Positives = 355/599 (59%), Gaps = 26/599 (4%)
Query: 47 DTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDV-LPAHKFGTHDVVVLKPNKADLG 105
+ A+ GST++ L D G G+T++ + LP + + VVL +AD
Sbjct: 32 EQAELTGSTLVGLAIRDETPGFGGRTVVTLGKRDRRLELPWTRLRSGMPVVLSVQQADNR 91
Query: 106 SPALGQGVVYRLKDSSITVAFDDIPEEGLNSPL-RLEKLANEVTYRRMKDALIQLSKGVQ 164
+ G V +R +DS I V D PE ++ PL RL+ A++V R + AL ++ + +
Sbjct: 92 TGWRGI-VTWRDRDS-IAVVLSDSPETEVDRPLYRLDMAADDVARERQRSALRRIGE-ID 148
Query: 165 NGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTG 224
G A L + G++ P + P + LD SQ+ A+S ALS++++ ++HGPPGTG
Sbjct: 149 RGRALRLKQAVLGKEPPE-FDAVPDWSPL-AQLDESQQAAVSHALSAQHLAVIHGPPGTG 206
Query: 225 KTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESA 284
KTTTVVE+I Q V+RG K+LACAASN+AVDN++ERLV R R++R+GHPAR+LP++ E
Sbjct: 207 KTTTVVELIRQAVRRGEKVLACAASNLAVDNLLERLVIARERVIRIGHPARVLPELREHT 266
Query: 285 LDAQVLRGDNSSLASDIRKEMKALN---GKLLKT-KDKNTRREIQKELRTLSKEERKRQQ 340
LD V + LA + KE +L GK +T RR+ + E + L ++ R+ +
Sbjct: 267 LDVMVESHPDLKLAREWTKEAWSLRRQAGKFTRTAPPPGARRDARDEAKRLLRDARELES 326
Query: 341 LAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAG 400
V ++ +A VV TLTG L FDLV+IDEAAQ+ E CWI LL+ R +LAG
Sbjct: 327 RLVEYLLDSAQVVCATLTGLNDEILGERQFDLVVIDEAAQSTEPPCWIPLLRSKRLVLAG 386
Query: 401 DHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNS 460
DH QLPPT+ S +A ++G ++ ERL +GD + L QYRMH+ IM +SS + Y+S
Sbjct: 387 DHCQLPPTIISHDARREGFQVSMMERLVSRWGDLIARRLDTQYRMHDRIMQFSSDEFYDS 446
Query: 461 ------KIKAHP----SGVKRTSSTEPTLLLIDIAGCD-MEEKKDEEDSTMNEGEAEVAM 509
++AH V T+ ++ D AG D +E+ + E +S N GEAE +
Sbjct: 447 SLISANSVRAHRLADLPHVTDGELTQSSIRFFDTAGSDCVEQAEVEGESRTNPGEAEFVV 506
Query: 510 AHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIII 569
L+ +GV ++I +ITPY+AQ LL+ L ++ +E+ TVDGFQGREKEA++I
Sbjct: 507 IKVNELLAAGVRPTEIAVITPYSAQARLLRTLIAE----AGVEIDTVDGFQGREKEAVVI 562
Query: 570 SMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEY 628
S+VRSN+K E+GFL+D RRMNVA+TRARR + D+ T+++ F R++ YFE Y
Sbjct: 563 SLVRSNAKGELGFLTDTRRMNVALTRARRHLMVFGDSATLANHEFYLRMLNYFERQDAY 621
>gi|134078610|emb|CAK32628.1| unnamed protein product [Aspergillus niger]
Length = 723
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 234/565 (41%), Positives = 337/565 (59%), Gaps = 60/565 (10%)
Query: 119 DSSITVAF-----------DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGP 167
+S++ VAF +D EE + + KLAN+VTYRRM + ++ K ++
Sbjct: 153 ESAVWVAFGGKDGGKGKDAEDGVEELWGRKVWMIKLANDVTYRRMNQTMEKMVKMAES-E 211
Query: 168 AAGLIPVLFGEQKPTVLKKDI--AFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGK 225
+ V FG P + D A + + L+ SQK+AI AL+++ + ++HGPPGTGK
Sbjct: 212 HTHFMRVAFGHTSPMLPDYDSIGALEFTDPTLNDSQKEAIRFALAAREIALIHGPPGTGK 271
Query: 226 TTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESAL 285
T T++E+I+Q V+R ++L C SNI+VDNIVERL P +V +VR+GHPARLLP VL+ +L
Sbjct: 272 THTLIELIVQMVQRKQRVLVCGPSNISVDNIVERLAPKKVPVVRIGHPARLLPSVLDHSL 331
Query: 286 DAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTD 345
+ + +++ D+RKE+ + KT+ RR I +LR L +E R+R+ V +
Sbjct: 332 EVLTHTSEAAAIVRDVRKEIDQKQASIRKTRAARERRAIYDDLRELRREFRERENKCVEN 391
Query: 346 VIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQL 405
+++ + VVL TL GA +L N FD+VIIDEA+QALE CWI LL S+ +LAGDHLQL
Sbjct: 392 LVRESSVVLATLHGAGGHQLKNQKFDVVIIDEASQALEAQCWIPLLSASKVVLAGDHLQL 451
Query: 406 PPTVQSVEA-------------------EKKGLGRTLFERLADLYGDEVTSMLTVQYRMH 446
PPTV+S + E L TLF+RL ++G + MLT QYRMH
Sbjct: 452 PPTVKSTKENAKKAAKEKEDKKENGELLENVSLETTLFDRLLSMHGPGIKRMLTTQYRMH 511
Query: 447 EHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLIDIAGCDMEEKKDE 495
E IM + S +LY+SK+ A P V+ T T+ L+ D G D EK ++
Sbjct: 512 EKIMQFPSDELYDSKLMAADSVKDRLLKDLPYEVEETDDTKEPLVFWDTQGGDFPEKTED 571
Query: 496 ED---------STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQV-VLLKILRSKD 545
D S N+ EA V H L+ +G+H DI +ITPY Q+ VL ++LR
Sbjct: 572 ADLGKKAHLGESKSNDMEALVVSRHVDALVDAGIHPEDIAVITPYNGQLAVLSQMLR--- 628
Query: 546 DKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN--VAVTRARRQCCLV 603
+K ++E+ +VDGFQGREKEA+++S+VRSNS+ EVGFL +RRR+N VA+TR +R C+
Sbjct: 629 EKYPSIELGSVDGFQGREKEAVVVSLVRSNSEHEVGFLGERRRLNALVAMTRPKRHLCIC 688
Query: 604 CDTETVS-SDGFLKRLIEYFEEHAE 627
D+ET+S GFLKR + + EEHA+
Sbjct: 689 GDSETISKGSGFLKRWMAFLEEHAD 713
>gi|189208013|ref|XP_001940340.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976433|gb|EDU43059.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 715
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 261/696 (37%), Positives = 379/696 (54%), Gaps = 111/696 (15%)
Query: 18 FVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF- 76
F + L+D E +AE+S + +S + + G ILNL +TGL GKT++E
Sbjct: 10 FAASQLTLLDAELQAELSETNVLLSSHTPTSLARAGLAILNLNVSSIRTGLGGKTVVELG 69
Query: 77 -------QSTKGDVLPAHKFGTHDVVVLKPNKADLGSPAL----------GQGVVYRLKD 119
+ K D+ P H D+V ++ + GS GVV +++
Sbjct: 70 LDSAVVAKGEKPDI-PEHGIRVGDIVAVQDQPS--GSAKKTEKKELEKKGASGVVLKVRR 126
Query: 120 SSITVAFD----DIPEEG----LNSPL-RLEKLANEVTYRRMKDALIQLSKGVQNGPAAG 170
++ + D D+P G +N + RL+KL ++ M+
Sbjct: 127 ENVEIVLDKEDADVPTGGKLWMMNQTMSRLQKLGDQDYTPFMR----------------- 169
Query: 171 LIPVLFGEQKPTVLKKDI--AFKPFNS------NLDHSQKDAISKALSSKNVFMLHGPPG 222
VLFG+ PT L D+ P ++ +L+ SQ++AI AL+S+ V ++HGPPG
Sbjct: 170 ---VLFGQTSPTPLPLDLNDPSNPLHNLEWNDPSLNDSQQEAIRFALASREVALIHGPPG 226
Query: 223 TGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLE 282
TGKT T++E+ILQ +K+ ++L C SNI+VDNIVERL H+V +VRLGHPARLLP VL
Sbjct: 227 TGKTHTLIELILQLLKQKLRLLVCGPSNISVDNIVERLASHKVPMVRLGHPARLLPSVLN 286
Query: 283 SALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLA 342
+LD + ++L D+RKEM + KT++ RR+I EL+ L +E R+R++
Sbjct: 287 HSLDVLTRTSEAAALVQDVRKEMDDKQSSIRKTRNAKERRQIYTELKELRQEFREREKGC 346
Query: 343 VTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL--KGSRCILAG 400
V +++ + VVL TL GA L FD+VIIDEA+QALE CW+ LL K S+ +LAG
Sbjct: 347 VNNLVSGSKVVLATLHGAGGFHLKGQEFDVVIIDEASQALEAQCWVPLLWVKASKLVLAG 406
Query: 401 DHLQLPPTVQSV--------------------EAEKKG----LGRTLFERLADLYGDEVT 436
DHLQLPPT++S+ +AEK L TLF+RL L+G +
Sbjct: 407 DHLQLPPTIKSLNSKESKAAKKDAKKSTDKTGDAEKPAINTTLETTLFDRLLALHGPSIK 466
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSK-----------IKAHPSGVKRTSSTEPTLLLIDIA 485
MLT QYRMHE IM + S +LY+SK +K P V+ T T L+ D
Sbjct: 467 RMLTTQYRMHEKIMRFPSDELYDSKLIAAEFVKERLLKDLPYEVEDTEDTREPLVFWDTQ 526
Query: 486 GCDMEEKKDEE-------------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYA 532
G D EK ++E DS NE EA + H LI +GV A DI ++TPY
Sbjct: 527 GGDFPEKIEDEGVIGKGGKGMNLGDSKSNEAEAALVKMHVSNLISAGVKAEDIAVVTPYN 586
Query: 533 AQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVA 592
AQ+ LL + + +E+ +VDGFQGREKEA+I+S VRSNS+ EVGFL ++RR+NVA
Sbjct: 587 AQLALLGGMLK--EAYPGIELGSVDGFQGREKEAVIVSTVRSNSEHEVGFLGEKRRLNVA 644
Query: 593 VTRARRQCCLVCDTETVS-SDGFLKRLIEYFEEHAE 627
+TR +R C++ D++T+S FLK +++ E+ A+
Sbjct: 645 MTRPKRHLCVIGDSDTISKGTKFLKDWMQHLEDDAD 680
>gi|115433256|ref|XP_001216765.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189617|gb|EAU31317.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 701
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 253/704 (35%), Positives = 380/704 (53%), Gaps = 86/704 (12%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLD-----TAQKKGSTILNLKCVDAQ 65
+ + + F L+ E EAE+S+S + + ++ T Q G + L +
Sbjct: 5 TPIPIPLFAQTQQSLLLREHEAEVSSSTLASTAASVSPSTRRTLQATGYALTGLILNQCR 64
Query: 66 TGLMGKTLLEFQS---------TKGD--VLPAHKFGTHDVV----VLKPNKADLGSP--- 107
TGL G+ + EF + T GD L AH D+V + P K + GS
Sbjct: 65 TGLGGRLVGEFGADPAVAVKSDTPGDEPRLAAHGIRVGDIVRVNEIGGPGKKEKGSSRDK 124
Query: 108 ------------ALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRR---M 152
+GVV R+ + + VAF ++G ++ E+ ++ M
Sbjct: 125 DKEKNEGKGGGGGGPEGVVTRVGERGVWVAFG---QQGGGKAKEDDEAVEELWGKKVWLM 181
Query: 153 KDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSK 212
+ +++K ++ + V FG P + + L+ SQK+AI AL++
Sbjct: 182 NQTMERMAKMTESD-WTHFMRVAFGHTTPLAPPPETNVDFEDETLNDSQKEAIRFALAAP 240
Query: 213 NVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGH 272
+V ++HGPPGTGKT T++E+I+Q V+RG ++L C SNI+VDNIVERL P V +VR+GH
Sbjct: 241 DVALIHGPPGTGKTHTLIELIVQLVRRGQRVLVCGPSNISVDNIVERLAPKEVSVVRIGH 300
Query: 273 PARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLS 332
PARLLP VL+ +L+ + +++ D+R+EM + + KT+ +R I ++++ L
Sbjct: 301 PARLLPSVLDHSLEVLTQTSEAAAIVRDVRREMDEKHASIRKTRFGREKRAIYQDIKELR 360
Query: 333 KEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLK 392
+E R+R+ V ++++ + VVL TL GA +L N FD+V+IDEA+QALE CWI LL
Sbjct: 361 REFREREARCVDNLVRGSSVVLATLHGAGGHQLRNQKFDVVVIDEASQALEAQCWIPLLT 420
Query: 393 GSRCILAGDHLQLPPTVQSVEAEKK----------------GLGRTLFERLADLYGDEVT 436
+ +LAGDHLQLPPTV+S + L T+F+RL ++G +
Sbjct: 421 APKVVLAGDHLQLPPTVKSKAGDAPPQDGAAEGDADVVRGISLETTMFDRLLAMHGPAIK 480
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLIDIA 485
MLT QYRMHE IM + S +LY ++ A P V+ T T ++ D
Sbjct: 481 RMLTTQYRMHERIMRFPSDELYEGRLMAADAVKARLLKDLPYEVQETDDTREPVVFWDTQ 540
Query: 486 GCDMEEKKDEE----------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQV 535
G D EK ++ +S NE EA V H L+Q+GV DI +ITPY Q+
Sbjct: 541 GGDFPEKTEDNEVGQKEALLGESKSNEMEALVVGKHVDALVQAGVRPEDIAVITPYNGQL 600
Query: 536 -VLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
VL ++LR +K +E+ +VDGFQGREKEA+++S+VRSNSK EVGFL +RRR+NVA+T
Sbjct: 601 AVLSQMLR---EKYPGLELGSVDGFQGREKEAVVVSLVRSNSKHEVGFLGERRRLNVAMT 657
Query: 595 RARRQCCLVCDTETVS-SDGFLKRLIEYFEEHAE--YLSGSEYL 635
R +R C+ D+ET+S GFLKR +E+ EEHA+ Y E L
Sbjct: 658 RPKRHLCVCGDSETISRGSGFLKRWMEFLEEHADLRYPDAGELL 701
>gi|116180746|ref|XP_001220222.1| hypothetical protein CHGG_01001 [Chaetomium globosum CBS 148.51]
gi|88185298|gb|EAQ92766.1| hypothetical protein CHGG_01001 [Chaetomium globosum CBS 148.51]
Length = 615
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/542 (40%), Positives = 319/542 (58%), Gaps = 60/542 (11%)
Query: 142 KLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIA-------FKPFN 194
K+A++VT+RRM + +L+K ++ + + VLFG P+ + D+ + +
Sbjct: 65 KVADDVTFRRMNATMERLAK-MEEREYSAFVRVLFGLSSPSPVAADLTRDEEVGEIEWVD 123
Query: 195 SNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVD 254
L+ SQKDAI AL+S+ + ++HGPPGTGKT T++E+ILQ +KR ++L C SNI+VD
Sbjct: 124 PTLNDSQKDAIRFALASREIGLIHGPPGTGKTHTLIELILQLLKRNLRVLVCGPSNISVD 183
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
NIVERL PH++ L+RLGHPARLLP VL +LD + ++ D+R EM A + K
Sbjct: 184 NIVERLAPHKIPLIRLGHPARLLPSVLNHSLDVLTRTSEAGAIVKDVRAEMDAKQASIRK 243
Query: 315 TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVI 374
T++ RR I +L+ L KE R+R++ V+ ++ + VVL TL GA +L FD+V+
Sbjct: 244 TRNARERRAIYADLKDLRKEYRERERRCVSSLVAGSKVVLATLHGAGGFQLRGEQFDVVV 303
Query: 375 IDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSV------------------EAEK 416
IDEA+QALE CW+ LL S+ I AGDHLQLPPT++S+ E
Sbjct: 304 IDEASQALEAQCWVPLLAASKAICAGDHLQLPPTIKSLNLKKKGSSKKGKDATDGEEGVV 363
Query: 417 KG--LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH--------- 465
KG L TLF+RL L+G + MLT QYRMHE IM + S +LY K+ A
Sbjct: 364 KGATLETTLFDRLLKLHGPSIKRMLTTQYRMHEKIMRFPSDELYERKLIAADAVKARLLK 423
Query: 466 --PSGVKRTSSTEPTLLLIDIAGCDMEEKKDEE-----------------DSTMNEGEAE 506
P V T T L+ ID G D EK +++ DS NE EA
Sbjct: 424 DLPYEVDDTDDTTEPLIFIDTQGGDFPEKNEDDQDASGGSKKLTKSSLYGDSKSNEMEAA 483
Query: 507 VAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEA 566
+ H + L+ +GV DI ++TPY AQ+ +L L+ + +E+ +VDGFQGREKEA
Sbjct: 484 LVRQHVQSLVDAGVKPEDIAVVTPYNAQLAVLAPLK---EAFPGIELGSVDGFQGREKEA 540
Query: 567 IIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG-FLKRLIEYFEEH 625
+I+S+VRSN EVGFL ++RR+NVA+TR +R ++ D+ETV FLK +++ EE+
Sbjct: 541 VIVSLVRSNPDGEVGFLGEKRRLNVAMTRPKRSLTVIGDSETVKKGSKFLKDWMDFLEEN 600
Query: 626 AE 627
A+
Sbjct: 601 AD 602
>gi|440473747|gb|ELQ42525.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae Y34]
Length = 877
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 244/632 (38%), Positives = 343/632 (54%), Gaps = 91/632 (14%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEFQS---TKGDVLPAHKFGTHDVVVLKPNKADLGS 106
Q+ G+ + NL +TG G+T++E S G LP H DVV++ A GS
Sbjct: 42 QRAGAALTNLTVQGRRTGAGGRTVVELSSDPAVGGIELPEHGLRVGDVVLVAEQPA--GS 99
Query: 107 PA----------LGQGVVYRLKDSSITVAFD---------DIPEEGLNSPLRLEKLANEV 147
+GVV R++ S + VA D E+GL + + +LA++V
Sbjct: 100 AKKREVREMERNGVRGVVTRVRRSDLNVALDAGDDKSGGAGKEEKGLAGRVWVVRLADDV 159
Query: 148 TYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKP-------FNSNLDHS 200
TYRRM + ++ + + + + I VLFG P+ + ++ P + L+ S
Sbjct: 160 TYRRMTWTMEKMER-MADAEHSNFIRVLFGHSSPSPVPSNLKTDPEFGELEWLDPTLNDS 218
Query: 201 QKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERL 260
QKDAI AL+SK + ++HGPPGTGKT T++E+ILQ +K+G +IL C SNI+VDNIVERL
Sbjct: 219 QKDAIRFALASKEIALIHGPPGTGKTHTLIELILQMLKQGLRILVCGPSNISVDNIVERL 278
Query: 261 VPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNT 320
PH+V +VRLGHPARLLP V+ +LD + ++ D+R EM A + KTK
Sbjct: 279 APHKVPIVRLGHPARLLPSVVGHSLDVLTQTSEAGAIVRDVRAEMDAKQASIKKTKSGRE 338
Query: 321 RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQ 380
R+ I EL L KE R R++ V ++++++ VVL TL G+ +L FD+VIIDEA+Q
Sbjct: 339 RKAIYGELHELRKEFRDREKRCVANLLQSSKVVLATLHGSGGFQLRQEKFDVVIIDEASQ 398
Query: 381 ALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA-------------------------- 414
ALE CW+ALL + +LAGDHLQLPPT++S+ +
Sbjct: 399 ALEAQCWVALLSAKKAVLAGDHLQLPPTIKSLNSKAAKTATGGDGSGTADGEESSAGQSR 458
Query: 415 EKKG--LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH------- 465
+KKG L TLF+RL DL+G + MLT QYRMHE IM + S +LY ++ A
Sbjct: 459 KKKGVTLETTLFDRLLDLHGPAIKRMLTTQYRMHEKIMRFPSDELYGGRLVAAEAVKERL 518
Query: 466 ----PSGVKRTSSTEPTLLLIDIAGCDMEEKKDEED------------------STMNEG 503
P V+ T T L+ ID G D E+ DE D S NE
Sbjct: 519 LKDLPYKVEDTDDTSEPLIFIDTQGGDFPERNDEMDNGDADDKKKTKRMLLHGESKSNEM 578
Query: 504 EAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGRE 563
EA + H + L+ +GV DI ITPY AQ+ +L L D+ +E+ +VDGFQGRE
Sbjct: 579 EAALVAQHVRSLVDAGVKPEDIACITPYNAQLAVLAPLLK--DRFPGIELGSVDGFQGRE 636
Query: 564 KEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
KEA+++S+ RSN EVGFL +RRR+N R
Sbjct: 637 KEAVVVSLCRSNPDGEVGFLGERRRLNAPTRR 668
>gi|440484591|gb|ELQ64645.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae P131]
Length = 1265
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 244/632 (38%), Positives = 343/632 (54%), Gaps = 91/632 (14%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEFQS---TKGDVLPAHKFGTHDVVVLKPNKADLGS 106
Q+ G+ + NL +TG G+T++E S G LP H DVV++ A GS
Sbjct: 430 QRAGAALTNLTVQGRRTGAGGRTVVELSSDPAVGGIELPEHGLRVGDVVLVAEQPA--GS 487
Query: 107 PA----------LGQGVVYRLKDSSITVAFD---------DIPEEGLNSPLRLEKLANEV 147
+GVV R++ S + VA D E+GL + + +LA++V
Sbjct: 488 AKKREVREMERNGVRGVVTRVRRSDLNVALDAGDDKSGGAGKEEKGLAGRVWVVRLADDV 547
Query: 148 TYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKP-------FNSNLDHS 200
TYRRM + ++ + + + + I VLFG P+ + ++ P + L+ S
Sbjct: 548 TYRRMTWTMEKMER-MADAEHSNFIRVLFGHSSPSPVPSNLKTDPEFGELEWLDPTLNDS 606
Query: 201 QKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERL 260
QKDAI AL+SK + ++HGPPGTGKT T++E+ILQ +K+G +IL C SNI+VDNIVERL
Sbjct: 607 QKDAIRFALASKEIALIHGPPGTGKTHTLIELILQMLKQGLRILVCGPSNISVDNIVERL 666
Query: 261 VPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNT 320
PH+V +VRLGHPARLLP V+ +LD + ++ D+R EM A + KTK
Sbjct: 667 APHKVPIVRLGHPARLLPSVVGHSLDVLTQTSEAGAIVRDVRAEMDAKQASIKKTKSGRE 726
Query: 321 RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQ 380
R+ I EL L KE R R++ V ++++++ VVL TL G+ +L FD+VIIDEA+Q
Sbjct: 727 RKAIYGELHELRKEFRDREKRCVANLLQSSKVVLATLHGSGGFQLRQEKFDVVIIDEASQ 786
Query: 381 ALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA-------------------------- 414
ALE CW+ALL + +LAGDHLQLPPT++S+ +
Sbjct: 787 ALEAQCWVALLSAKKAVLAGDHLQLPPTIKSLNSKAAKTATGGDGSGTADGEESSAGQSR 846
Query: 415 EKKG--LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH------- 465
+KKG L TLF+RL DL+G + MLT QYRMHE IM + S +LY ++ A
Sbjct: 847 KKKGVTLETTLFDRLLDLHGPAIKRMLTTQYRMHEKIMRFPSDELYGGRLVAAEAVKERL 906
Query: 466 ----PSGVKRTSSTEPTLLLIDIAGCDMEEKKDEED------------------STMNEG 503
P V+ T T L+ ID G D E+ DE D S NE
Sbjct: 907 LKDLPYKVEDTDDTSEPLIFIDTQGGDFPERNDEMDNGDADDKKKTKRMLLHGESKSNEM 966
Query: 504 EAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGRE 563
EA + H + L+ +GV DI ITPY AQ+ +L L D+ +E+ +VDGFQGRE
Sbjct: 967 EAALVAQHVRSLVDAGVKPEDIACITPYNAQLAVLAPLLK--DRFPGIELGSVDGFQGRE 1024
Query: 564 KEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
KEA+++S+ RSN EVGFL +RRR+N R
Sbjct: 1025 KEAVVVSLCRSNPDGEVGFLGERRRLNAPTRR 1056
>gi|345567575|gb|EGX50505.1| hypothetical protein AOL_s00075g234 [Arthrobotrys oligospora ATCC
24927]
Length = 650
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 249/638 (39%), Positives = 368/638 (57%), Gaps = 49/638 (7%)
Query: 25 LIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDV- 83
L++ +EAE+ S A N +G +LNL + TGL GK+++E V
Sbjct: 16 LLEKAREAELQLSNEDIAQANSKALSTRGLALLNLCISRSYTGLGGKSVVELSPDSSLVS 75
Query: 84 --LPAHKFGTHDVVVLKPNKADLGSPALG--------QGVVYRLKDSSITVAFD-DIPEE 132
+PAH T D+V ++ + + GVV R + VA D D
Sbjct: 76 GGIPAHGLKTGDIVKIQEQLSSSIKKSQKKETQDEGLNGVVIRSGSQKLAVALDMDKSYL 135
Query: 133 GLNSP--LRLEKLANEVTYRRMKDALIQL-SKGVQNGPAAGLIPVLFG--EQKPTVLKKD 187
+++ LR+ K+AN+ ++RM + L SK ++ P+ +I + FG P V K +
Sbjct: 136 SIDTAKRLRVVKVANDAPFKRMMQTFLDLKSKQPEDLPS--IIKIAFGLAAYFPPV-KSE 192
Query: 188 IAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACA 247
I F+ L+ QK+A+S AL + ++ ++HGPPGTGKT T++EII Q V R KIL C
Sbjct: 193 IRLDFFDEQLNEVQKEAVSFALEATDLALIHGPPGTGKTQTLIEIIRQLVARDLKILVCG 252
Query: 248 ASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKA 307
SNI+VDNI ++L P R+ +VR+GHPARLLP V+ ++LD + L +DIRKEM
Sbjct: 253 PSNISVDNIADKLGPFRIPMVRIGHPARLLPSVISTSLDVAIKYSSGGMLVNDIRKEMDE 312
Query: 308 LNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDN 367
KT++ RR++ +++R L KE + R++ + D+++ + +VL+TL GA R +
Sbjct: 313 KLNNSKKTRNGTERRKLWEDIRDLRKECKVRERRCIEDIVRASKIVLSTLHGAGGRDIIR 372
Query: 368 TSFDLVIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVE--AEKKGLGRTLF 424
+FD+VIIDEA QALE I L +G S+CILAGDHLQLPPT+ + + + L +LF
Sbjct: 373 QNFDVVIIDEAGQALEAQSLIPLARGPSKCILAGDHLQLPPTIPRTDKTSSLRKLELSLF 432
Query: 425 ERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNS------KIKAH-----PSGVKRTS 473
ERL L+G + L+VQYRMHE IM + S LY+S +++H P+ +K
Sbjct: 433 ERLIKLHGPLIKRTLSVQYRMHEMIMKYPSIGLYDSLLLADVSVRSHLLSDLPNVIKTDE 492
Query: 474 STEPTLLL-IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYA 532
+ EP + + G E+ +S N EAE +GV DI IITPY
Sbjct: 493 TQEPLVFWDTNPHGGFGEDDTGAHESKSNAMEAE-----------AGVQPKDIAIITPYN 541
Query: 533 AQVVLLK-ILRSK-DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
AQV LL +++S+ D +E+ +VDGFQGREKEAI++S+VRSN KKEVGFL+D RR+N
Sbjct: 542 AQVALLSGLIKSEFPDAFSEIEIGSVDGFQGREKEAILLSLVRSNEKKEVGFLADERRLN 601
Query: 591 VAVTRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE 627
VA+TR RR C++ D+ TV+ FLK +++ EE+A+
Sbjct: 602 VAMTRPRRHLCVIGDSGTVARGSVFLKGWMDFLEENAD 639
>gi|410077865|ref|XP_003956514.1| hypothetical protein KAFR_0C03880 [Kazachstania africana CBS 2517]
gi|372463098|emb|CCF57379.1| hypothetical protein KAFR_0C03880 [Kazachstania africana CBS 2517]
Length = 675
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 257/686 (37%), Positives = 376/686 (54%), Gaps = 79/686 (11%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLE 75
+E I E++ ++ ++T + L G I NL + +TGL GK +E
Sbjct: 3 KELAESFLQCISHERDQDVEQTVTLLNTLPLKKLVSTGLAINNLTLENIRTGLAGKLYVE 62
Query: 76 F--------QSTKGDVLPAHKFGTHDVVVLKP---------------NKADLGSP-ALGQ 111
+ +GD+ K G D+V++KP N+ P +
Sbjct: 63 LAPDNAIDDEINRGDI----KVG--DIVIIKPSSKNASSSQKKKHSKNQESTNDPDSQCT 116
Query: 112 GVVYRLKDSSITVAFDDIPEEGLN-----SPLRLEKLANEVTYRRMKDALIQLSKGVQNG 166
GVVYR+ ITV D+ E+ S L + K AN +TY+RM+ + +L + +
Sbjct: 117 GVVYRITSQQITVTVDEKEEQNATKLYSYSRLHILKTANTITYKRMESTMRKLQE-FDSI 175
Query: 167 PAAGLIPVLFGEQK--PTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTG 224
P+ +I L P V I F N NL+ SQ+DAI ++ ++ + ++HGPPGTG
Sbjct: 176 PSNKIIQFLLNGATFIPRVSGDTIQFH--NPNLNESQRDAIKFSIDNE-ISIIHGPPGTG 232
Query: 225 KTTTVVEIILQEVKRGSKILACAASNIAVDNIVERL---VPHRVRLVRLGHPARLLPQVL 281
KT T++EII Q VKRG ++L C SNIAVD I+ERL +P + L+R+GHPARLL L
Sbjct: 233 KTYTIIEIIQQLVKRGERVLVCGPSNIAVDTILERLAKVLPGNL-LLRIGHPARLLEANL 291
Query: 282 ESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQL 341
+LD D ++ DI E+ + K K R+E E++ L KE R +++
Sbjct: 292 SHSLDILSKNSDAGAIVKDIYHEIDRTISSIRKIKSYKERKEAWNEVKLLRKELRVKEKK 351
Query: 342 AVTDVIKNADVVLTTLTGAVSRKLDNTS------FDLVIIDEAAQALEIACWIALLKG-- 393
+ ++I A V+++TL G+ S++L N FD +IIDE +Q++E CWI L+
Sbjct: 352 VIDELILGAKVIVSTLHGSSSKELCNIYNSTEKLFDTLIIDEVSQSMEPQCWIPLISHYK 411
Query: 394 ---SRCILAGDHLQLPPTVQSVEAEK--KGLGRTLFERLADLYGDEVTSMLTVQYRMHEH 448
R ILAGD+ QLPPTV++ + K L +TLF+RL ++YGD+ +L VQYRM+E+
Sbjct: 412 SNMKRLILAGDNKQLPPTVKTEDDVKIQSKLEKTLFDRLVEIYGDQFRKLLNVQYRMNEN 471
Query: 449 IMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEEDS 498
IM +SS Q+Y+ K+ A S GV T L+ D G D E +EE S
Sbjct: 472 IMTFSSVQMYDGKLLADDSVRDKLLSDIPGVDANDETNLPLIWYDTQGDDFLESTEEETS 531
Query: 499 TM-----NEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEV 553
T+ NE EA +AM H K+LI+S + IGII+PY+AQV LLK ++ DK +E+
Sbjct: 532 TIFQSKFNENEALIAMDHVKKLIESNIPEHAIGIISPYSAQVALLK--KTISDKYPTIEI 589
Query: 554 STVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG 613
STVDGFQGREKE II S+VRSN K EVGFL D RR+NVA+TR ++Q C++ + ET+ G
Sbjct: 590 STVDGFQGREKEVIIFSLVRSNEKFEVGFLKDERRLNVAMTRPKKQLCVIGNIETLQRSG 649
Query: 614 --FLKRLIEYFEEHAE--YLSGSEYL 635
+L + EE+++ Y +YL
Sbjct: 650 NKYLDSWGRWSEENSDIRYPDIGDYL 675
>gi|326426430|gb|EGD72000.1| hypothetical protein PTSG_00016 [Salpingoeca sp. ATCC 50818]
Length = 1132
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 236/619 (38%), Positives = 349/619 (56%), Gaps = 42/619 (6%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEFQSTK----GDVLP--AHKFGTHDVVVLKPNKAD 103
+K+G + L+ + L G+ + ST+ G P A + DVV + K
Sbjct: 38 EKQGLCLRRLQVTARKRDLGGRHIFTMTSTRSTPEGGTAPLLATRISVGDVVSVGTLKD- 96
Query: 104 LGSPALGQGVVYRLKDSSITVAFD------DIPEEGLNSPLRLEKLANEVTYRRMKDALI 157
G GV+ ++ + VA + D P E + L L +L++ VT+ +++ +
Sbjct: 97 -GMRGFATGVINKMSSMQLQVAVEESQVHHDQPWE--TNTLVLRQLSDTVTFGKLQWTID 153
Query: 158 QLSKGVQNGPAAGLIPVLFGEQ-KPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFM 216
++ KG P LI +L E P + A P N +L+ SQ A++ AL ++ +
Sbjct: 154 KVEKGDVQCPR--LIQLLMEESVHPLPRMAEEAVYPLNKSLNASQLGAVAFALQRPDIAV 211
Query: 217 LHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARL 276
+HGPPGTGKTTTVVE+ILQ VKRG K+L AASN+AVDN+VERL+ +VR+GHP+RL
Sbjct: 212 IHGPPGTGKTTTVVELILQLVKRGQKVLVAAASNMAVDNLVERLIAFNANVVRIGHPSRL 271
Query: 277 LPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRR---EIQKELRTLSK 333
L V + +LD+ + ++ + I +E+ + K + R + Q++++ L +
Sbjct: 272 LHSVKDHSLDSLLSSSEDMDIVRGIYEEIADIRNKRPSKRQPGARAAQFQAQRDIKDLRR 331
Query: 334 EERKRQQLAVTDVIKNADVVLTTLTG----AVSRKLDNTSFDLVIIDEAAQALEIACWIA 389
+ + R+ + ++ +ADVV T T V + + FD+ ++DEA QALE A W A
Sbjct: 332 DAQSRESRLLRQMLTSADVVCGTTTTVCPTGVLKNIPKEHFDVAVVDEAGQALEPAAWAA 391
Query: 390 LLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHI 449
+++ RC+LAGDH QLPPTV S A GL TL ER +++GD VT ML QYRMH I
Sbjct: 392 VMQAPRCVLAGDHFQLPPTVMSAAAVASGLPITLLERAVNMFGDSVTRMLDTQYRMHAAI 451
Query: 450 MNWSSKQLYNSKIKAHPS------------GVKRTSSTEPTLLLIDIAGCDMEEKKDEED 497
+WSS LYNS++ HP+ GV T +T L+ +D AG E E+D
Sbjct: 452 QSWSSAHLYNSQL--HPADQVAAHLLTQLDGVTDTETTRVPLVYVDTAGSGAHESSGEDD 509
Query: 498 -STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK-ILRSKDDKLKNMEVST 555
S NEGEA + + H L+ +GV DIG+ITPY QV ++ +L + +EVS+
Sbjct: 510 ISKCNEGEAMIVVEHVSSLLSAGVQPKDIGVITPYNLQVEKVRGLLSAHSGDASGVEVSS 569
Query: 556 VDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFL 615
VDGFQGREKEAI+IS+VRSN ++ VGFL D RR+NVAVTRARR C+V D+ T+++D +
Sbjct: 570 VDGFQGREKEAIVISLVRSNDERIVGFLRDFRRINVAVTRARRHLCIVGDSNTITADEHM 629
Query: 616 KRLIEYFEEHAEYLSGSEY 634
L+ Y HA + +Y
Sbjct: 630 DSLVNYLNAHAVLRTVHDY 648
>gi|302506539|ref|XP_003015226.1| hypothetical protein ARB_06349 [Arthroderma benhamiae CBS 112371]
gi|291178798|gb|EFE34586.1| hypothetical protein ARB_06349 [Arthroderma benhamiae CBS 112371]
Length = 1131
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/543 (40%), Positives = 311/543 (57%), Gaps = 64/543 (11%)
Query: 142 KLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDI--AFKPFNSNLDH 199
KLAN+VTYRRM + +L K +Q + LI VLFG P+ L + + + +L+
Sbjct: 601 KLANDVTYRRMNQTMAKLEK-MQESEHSQLIRVLFGHTTPSPLDFESVGTLEFMDPSLND 659
Query: 200 SQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVER 259
SQK+AI AL+S+ + ++HGPPGTGKT T++E+I Q V+R ++L C SNI+VDNIVER
Sbjct: 660 SQKEAIRFALASREIALIHGPPGTGKTHTLIELIRQLVQRKKRVLVCGPSNISVDNIVER 719
Query: 260 LVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKN 319
L H+V LVR+GHPARLL VL+ +L+ + +++ D+RKE+ + + KT++
Sbjct: 720 LALHKVPLVRIGHPARLLSSVLDHSLEVLSQTSEAAAIVKDVRKEIDSKQASIRKTRNGR 779
Query: 320 TRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAA 379
RR I +L+ L KE R+R+ V +++ + VVL TL GA +L N FD+V+IDEA+
Sbjct: 780 ERRAIYGDLKELRKEFRERESKCVDNIVSGSQVVLGTLHGAGGHQLKNQKFDIVLIDEAS 839
Query: 380 QALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEK----------------------- 416
QA E CWI LL SR +LAGDHLQLPPT++S +
Sbjct: 840 QAREAQCWIPLLPASRVVLAGDHLQLPPTIKSKSSSNSDRTGSALWDKEDLHFNELSNTF 899
Query: 417 --KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSK-----------IK 463
+ L TLF+RL L+G + MLT QYRMH+ IM++ S +LY SK +K
Sbjct: 900 DLRNLEITLFDRLLSLHGTGIKRMLTTQYRMHQKIMDFPSDELYESKLIAADAVRERLLK 959
Query: 464 AHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEED----------STMNEGEAEVAMAHAK 513
P V+ T T L+ D G D EK + + S N+ EA V H +
Sbjct: 960 DLPYEVEDTDDTREPLVFYDTQGGDFPEKSPDSNGISAKSLLVESKCNDMEAAVVARHVE 1019
Query: 514 RLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVR 573
L +GV DI +ITPY AQV LL L +K +E+ +VDGFQGREKEA+++S+VR
Sbjct: 1020 NLASAGVRPEDIAVITPYNAQVALLSQLLK--EKFPTLELGSVDGFQGREKEAVVVSLVR 1077
Query: 574 SNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAE--YLSG 631
SN EVGFL ++RR+N + C +C S FLKR + + EE+A+ Y
Sbjct: 1078 SNPDHEVGFLGEKRRLNAVM------CLYLC-----SGSPFLKRWMAFLEENADLRYPDI 1126
Query: 632 SEY 634
SE+
Sbjct: 1127 SEF 1129
>gi|67901330|ref|XP_680921.1| hypothetical protein AN7652.2 [Aspergillus nidulans FGSC A4]
gi|40742648|gb|EAA61838.1| hypothetical protein AN7652.2 [Aspergillus nidulans FGSC A4]
gi|259483986|tpe|CBF79824.1| TPA: DNA helicase, putative (AFU_orthologue; AFUA_2G01090)
[Aspergillus nidulans FGSC A4]
Length = 686
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 254/674 (37%), Positives = 364/674 (54%), Gaps = 98/674 (14%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEIS----ASITSGASRNLDTAQKKGSTILNLKCVDAQT 66
S +S+ F L+ E EAE+S AS + T Q G + + +T
Sbjct: 5 SPISIPLFAENQQQLLLKEHEAEVSSSKLASTAFASPLTRRTLQASGHALTGIILSQCRT 64
Query: 67 GLMGKTLLEFQS--------TKG---------DVLPAH---KFGTH-----DVVVL---- 97
GL G+ + EF + TKG + A+ K GTH DVV +
Sbjct: 65 GLGGRLVGEFTADAAISTGGTKGKGKDDDDAKSNIAANGKLKLGTHGIRVGDVVRVNEVV 124
Query: 98 ----------KPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEG-------------L 134
K K D S +GVV R+ +SS+ VAF G
Sbjct: 125 SAGKKAVGSGKDKKKDGDSAKGPEGVVTRVGESSVWVAFGQSGGGGRSKEEDEEVIEELY 184
Query: 135 NSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIA--FKP 192
L L KLAN+VT+RRM + +++K + + V FG P + A +
Sbjct: 185 GKKLWLIKLANDVTFRRMNQTMEKMAK-MSESDYTHFVRVAFGHTTPVQPDYEAAGPVEF 243
Query: 193 FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIA 252
+ L+ SQK+AI AL+S+++ ++HGPPGTGKT T++E+I+Q VKR ++L C SNI+
Sbjct: 244 IDPTLNDSQKEAIQFALASRDIALIHGPPGTGKTHTLIELIIQMVKRNLRVLVCGPSNIS 303
Query: 253 VDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKL 312
VDNIVERL P ++ +VR+GHPARLLP VL+ +L+ D +++ D+RKE+ + +
Sbjct: 304 VDNIVERLAPSKIPVVRIGHPARLLPSVLDHSLEVLTQTSDAAAIVRDVRKEIDEKHASI 363
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KT+ +R I +++R L +E R+R+ V ++++ + VVL TL GA +L N FD+
Sbjct: 364 RKTRFGREKRAIYQDIRELRREFRERESKCVDNLVRGSSVVLATLHGAGGHQLKNQKFDV 423
Query: 373 VIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLG------------ 420
VIIDEA+QALE CWI LL + +LAGDHLQLPPTV+S + K G
Sbjct: 424 VIIDEASQALEAQCWIPLLSAPKVVLAGDHLQLPPTVKSTPHKTKEAGEDGEQDANGSFS 483
Query: 421 --RTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PS 467
+TLF+RL L+G + MLT QYRMHE+IM + S +LY SK+ A P
Sbjct: 484 LEKTLFDRLLSLHGPGIKRMLTTQYRMHENIMRFPSDELYESKLIAAESVKSRLLKDLPY 543
Query: 468 GVKRTSSTEPTLLLIDIAGCDMEEKKDEE----------DSTMNEGEAEVAMAHAKRLIQ 517
V T T+ ++ D G D EK D+E +S NE EA V H L+Q
Sbjct: 544 NVHETDDTKEPVVFWDTQGGDFPEKVDDEEFAKKESLLGESKSNEMEALVVARHVDNLVQ 603
Query: 518 SGVHASDIGIITPYAAQV-VLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNS 576
+GV DI +ITPY Q+ VL ++LR +K ++E+ +VDGFQGREKEA+++S+VRSNS
Sbjct: 604 AGVRPEDIAVITPYNGQLAVLSQMLR---EKYPDLELGSVDGFQGREKEAVVVSLVRSNS 660
Query: 577 KKEVGFLSDRRRMN 590
+ EVGFL ++RR+N
Sbjct: 661 EHEVGFLGEKRRLN 674
>gi|145505511|ref|XP_001438722.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405894|emb|CAK71325.1| unnamed protein product [Paramecium tetraurelia]
Length = 743
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/508 (42%), Positives = 315/508 (62%), Gaps = 34/508 (6%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSN----LDHS 200
N+VTY+R + + + + P +I +LFG+Q + +K F + L+
Sbjct: 163 NQVTYKRHLQVIDDIKQQYEKHP---IIQILFGDQDEKMKEKINQNMEFQGDTIKQLNDQ 219
Query: 201 QKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV-KRGSKILACAASNIAVDNIVER 259
QK A+ KA++ ++ ++HGPPGTGKT TV E I Q V + KILACA SNIAVDN++ER
Sbjct: 220 QKIAVQKAMNQPHISLIHGPPGTGKTRTVCEYIKQAVLVQRHKILACANSNIAVDNMIER 279
Query: 260 LVP-HRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDK 318
+ ++++ R+G+PAR+ QV +D V + + ++ I+ E++ + KL + ++
Sbjct: 280 IQNISQLKVCRIGNPARMTDQVRYVCIDQLVKKTTSYAIMKTIKTEIQQIEKKLNRA-ER 338
Query: 319 NTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLD----NTSFDLVI 374
E++ +L+ KE ++QQLA + I++ V+ +T G+ + N FD+V+
Sbjct: 339 REAAELRDKLKQKKKEYFEQQQLAYEEAIQDCQVIFSTNVGSGQFQFQQLTKNIKFDVVV 398
Query: 375 IDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDE 434
IDE AQ+LEI+CWI +LKG++ +LAGDH QLPPTV++ + GL TLFER+ +
Sbjct: 399 IDECAQSLEISCWIPILKGNKVVLAGDHCQLPPTVKT---KNTGLEMTLFERVENEL--H 453
Query: 435 VTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKK- 493
V +LTVQYRM++ IM WSS++ Y+ + A + RT S + LL +D + CD E++
Sbjct: 454 VNILLTVQYRMNKSIMQWSSQEFYDGHLVADQTVANRTVS-DTILLFVDTSCCDFYEQQQ 512
Query: 494 -------DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDD 546
D+ S N GEA + ++ LI GV DIGIITPY AQV LLK
Sbjct: 513 ESLLYFDDQNKSKYNVGEAGLVQIISEELINLGVQKQDIGIITPYNAQVQLLK------S 566
Query: 547 KLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 606
K+ ++E+STVDGFQGREK+ IIISMVRSN EVGFL + RRMNVAVTRA++ CL+ D+
Sbjct: 567 KINDIEISTVDGFQGREKDCIIISMVRSNQMGEVGFLCESRRMNVAVTRAKKFVCLIGDS 626
Query: 607 ETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
ETVS+D FLKRLI+YF E+ E S EY
Sbjct: 627 ETVSNDAFLKRLIDYFVENGEQRSAQEY 654
>gi|167536549|ref|XP_001749946.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771661|gb|EDQ85325.1| predicted protein [Monosiga brevicollis MX1]
Length = 1034
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 248/660 (37%), Positives = 356/660 (53%), Gaps = 53/660 (8%)
Query: 6 TKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQ 65
T K SL +++ L+ +E++AE A + N+ + G + L D +
Sbjct: 18 TPGKSDVASLDDWLQRQRSLLAMEQKAEAEA-VEPLRRDNIKRLEAAGLVVRRLAMEDGR 76
Query: 66 TGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVA 125
TG+ G+ ++ F + P + G V +++ L GVV + +I VA
Sbjct: 77 TGMNGRFIVRFGRSAAATTPDDRPGDLTAVA----RSNEPEKTLATGVVTAVDGRTIRVA 132
Query: 126 FD-DIPEEGLN-----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQ 179
F+ D ++G + L L KL+N VTYRRM L ++ P A L+ ++
Sbjct: 133 FEADTDDDGFADVQTANNLLLYKLSNTVTYRRMMLTLNLMTD--PEWPGALNATRLYNKE 190
Query: 180 KPTVLKKDIAFKP-------FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEI 232
L + +P N L+ SQ+ A+ AL S+ + ++HGPPGTGKTTTVVE+
Sbjct: 191 NLQQLTQSATPRPSDPELSFVNPGLNDSQRAAVRFALLSQGISLIHGPPGTGKTTTVVEL 250
Query: 233 ILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRG 292
I Q V++G K+L A SN+A+DNI +L +V+ E ALDA + R
Sbjct: 251 IHQCVRQGLKVLVAAPSNMAIDNIALKLAQTKVQ---------------EHALDAVLERS 295
Query: 293 DNSSLASDIRKEM-KALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNAD 351
D + + IR+++ +A+ G L+ ++ RR EL+TL KE R+ Q +T V++ A
Sbjct: 296 DVAEVTQGIREDITQAVKG--LQKGPRSARRGHAAELKTLRKELREYQHKGITQVLRAAQ 353
Query: 352 VVLTTLTGAVS----RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPP 407
VVL T T + + L FD+VI+DEA QALE+ACW AL+ + +LAGDH QLPP
Sbjct: 354 VVLGTTTTVSASGSLKHLPKEHFDVVIVDEAGQALEVACWSALIHARKMVLAGDHWQLPP 413
Query: 408 TVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS 467
TV S EA K+GL TL ER+ + G E ML QYRMH I WSS Q Y S+++A S
Sbjct: 414 TVTSKEAAKQGLAYTLLERVLSVCGGETVCMLDTQYRMHACIQGWSSSQFYESRLRADAS 473
Query: 468 GVKRTSS----------TEPTLLLIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLI 516
+ T + TE L +D +GC + E E+D S N EA + + H ++L+
Sbjct: 474 VMGHTLAMLPNVQADELTEVPLHFVDTSGCSLYEAVGEDDLSKYNTAEAAIVVHHVQQLV 533
Query: 517 QSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNS 576
+ GV S+IG+ITPY QV ++ + +EV +VDGFQGREKEAI ISMVRSN
Sbjct: 534 ELGVPPSEIGVITPYNMQVETIRGRLREAGLSSEIEVLSVDGFQGREKEAICISMVRSNP 593
Query: 577 KKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLN 636
+GFLSD RRMNVAVTRARR C LV D+ T+S++ L L +Y E A S E+ +
Sbjct: 594 DCNIGFLSDFRRMNVAVTRARRHCFLVGDSRTISAETHLAALTDYLFEFASVSSAREFAD 653
>gi|295667237|ref|XP_002794168.1| helicase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286274|gb|EEH41840.1| helicase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 739
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/585 (37%), Positives = 329/585 (56%), Gaps = 87/585 (14%)
Query: 111 QGVVYRLKDSSITVAFDDIPEEG-----------LNSPLRLEKLANEVTYRRMKDALIQL 159
+GVV R+ + S+ VAF + + G + + KLAN++TYRRMK + ++
Sbjct: 160 EGVVTRVGERSVWVAFSERGDMGKGRYEESVEDLWARKVWMVKLANDITYRRMKQTMTKM 219
Query: 160 SKGVQNGPAAGLIPVLFGEQKPTVLKKD----IAFKPFNSNLDHSQKDAISKALSSKNVF 215
+ + + V+FG P+ + D I F + L+ SQ++AI AL+S+ +
Sbjct: 220 -ENMTESEYTHFMRVVFGHTTPSPVDMDSIGTIDF--IDPTLNDSQREAIRFALASREIA 276
Query: 216 MLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPAR 275
++HGPPGTGKT T++E+ILQ ++R ++L C SN++VDNIVERL PH+V LVR+GHPAR
Sbjct: 277 LIHGPPGTGKTYTLIELILQLLRRNLRVLVCGPSNVSVDNIVERLAPHKVPLVRIGHPAR 336
Query: 276 LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEE 335
LL +L+ +L+ D +++ D+RKE++ + KT+ RREI ++L+ L KE
Sbjct: 337 LLSTILDYSLEVLTQTSDAAAIVKDVRKEIEIKQASIRKTRSGRERREIYRDLKELRKEF 396
Query: 336 RKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR 395
R+R+ V +++ ++ VVL TL GA +L N FD+VIIDEA+QALE CW+ LL ++
Sbjct: 397 REREAKCVGNLVTDSKVVLATLHGAGGHQLRNQKFDVVIIDEASQALEAQCWVPLLSATK 456
Query: 396 CILAGDHLQLPPTVQSVEAEKKG--------------------------------LGRTL 423
ILAGDHLQLPPT++S + G L TL
Sbjct: 457 AILAGDHLQLPPTIKSTPLKSNGAESGKLSGEEKATLSADRDSSVGQHKATKGVTLEVTL 516
Query: 424 FERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS-----------GVKRT 472
F+RL L+G + MLT QYRMHE IM + SK+LY SK+ A + V T
Sbjct: 517 FDRLLSLHGPAIKRMLTTQYRMHEKIMKFPSKELYESKLVAADAVKLRLLKNLQYEVAET 576
Query: 473 SSTEPTLLLIDIAGCDMEEKKDEE-------------DSTMNEGEAEVAMAHAKRLIQSG 519
T L+ D G D E+ +E +S N+ EA V H + L+ +G
Sbjct: 577 DDTREPLVFYDTQGGDFPERTEEPAVASKQKQEPMFAESKSNDMEAAVVARHVENLVATG 636
Query: 520 VHASDIGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK 578
V DI ++TPY AQ+ +L ++LR DK +E+ +VDGFQGREKEA+I+S+VRSN +
Sbjct: 637 VKPEDIAVVTPYNAQLTILSQLLR---DKHPGIELGSVDGFQGREKEAVIVSLVRSNPEH 693
Query: 579 EVGFLSDRRRMNVA---------VTRARRQCCLVCDTETVSSDGF 614
+VGFL ++RR+N A V++ R+ + ++E +S +
Sbjct: 694 KVGFLGEKRRLNGAQIPFIIERKVSKCRKSHYYIMNSEMLSYSRY 738
>gi|223994041|ref|XP_002286704.1| hypothetical protein THAPSDRAFT_31575 [Thalassiosira pseudonana
CCMP1335]
gi|220978019|gb|EED96345.1| hypothetical protein THAPSDRAFT_31575 [Thalassiosira pseudonana
CCMP1335]
Length = 497
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/488 (43%), Positives = 300/488 (61%), Gaps = 49/488 (10%)
Query: 194 NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIA 252
++ LD+SQK+A+ ALS + ++HGPPGTGKTTTV E+I V +G K+L A SN+A
Sbjct: 12 STRLDYSQKEAVVMALSGSPINLIHGPPGTGKTTTVAELIRCAVNNKGWKVLVTAPSNVA 71
Query: 253 VDNIVERLV---PHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALN 309
VDN++ RL+ +++ VRLGHPAR+ + + +L++ V + + + D R E+ A
Sbjct: 72 VDNVLGRLIINKQRKIKAVRLGHPARIQNGIQKYSLESLVQSSEGTEIVRDCRSELNAHL 131
Query: 310 GKLLKTKDKNTRREI-QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA---VSRKL 365
L K + + + I +E+++L KE R R++ V +++ A+VVL T GA V R++
Sbjct: 132 RTLASAKSRPSEKRIAYREMKSLRKEIRTREEKVVGEILTLANVVLATNVGAAGSVFRRM 191
Query: 366 DNT-----SFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS-VEAEKKGL 419
++ FDLVIIDEAAQALE +CWI+LL+G R ILAGDH QLPPT++S V + L
Sbjct: 192 VDSKGGAIEFDLVIIDEAAQALEASCWISLLRGKRAILAGDHNQLPPTIKSSVREVQYNL 251
Query: 420 GRTLFERLADLYGDEVTS-------MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT 472
GRTLFERL + Y + T ML VQYRMHE + NW+S +Y+ K+ +H S R
Sbjct: 252 GRTLFERLMNAYDSDKTGQPKSCSKMLEVQYRMHEDVSNWASNAMYDGKLVSHESVRHRK 311
Query: 473 SSTEP-----------------------TLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAM 509
++ P TLLL+D GCDM E + S NEGEA++ +
Sbjct: 312 LASLPQVEEQLKATNKDIAEDGTGLQNVTLLLVDTTGCDMHEMTTDAGSRYNEGEADIVV 371
Query: 510 AHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIII 569
+H LI G+ A DI +ITPY QV LL+ D + +E+ +VDGFQG E+EA+++
Sbjct: 372 SHVHSLISLGLRAEDIAVITPYNGQVELLRKRLLTD--IPKLEIRSVDGFQGGEREAVVL 429
Query: 570 SMVRSN---SKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHA 626
S+VRS+ K +GFL D RR+NVAVTRA+R C ++CD ETVS F+K LIE+ E
Sbjct: 430 SLVRSSEKGGKDGIGFLRDERRLNVAVTRAKRHCAVICDCETVSQSSFIKGLIEWMEAKG 489
Query: 627 EYLSGSEY 634
+Y SG+EY
Sbjct: 490 DYHSGAEY 497
>gi|406603293|emb|CCH45172.1| DNA-binding protein SMUBP-2 [Wickerhamomyces ciferrii]
Length = 681
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 259/671 (38%), Positives = 376/671 (56%), Gaps = 78/671 (11%)
Query: 26 IDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKG---- 81
IDLE+ A+I + S KG I+NL +TGL G+T++E ++ G
Sbjct: 14 IDLERNADIDQTSDLLNSLPPKKLALKGLAIINLTTESIKTGLGGRTIIELKNDLGGHED 73
Query: 82 DVLPAHKFGTHDVVVLKP----------------NKADLGSPALGQGVVYRLKDSSITVA 125
D + A T D+V + N D S +GVV RL +SSI +
Sbjct: 74 DSIVAGDIRTGDIVKIDKMSSSNSTKKKVKSNGKNNDDSDSNFGCEGVVTRLSNSSIVIT 133
Query: 126 FDDIPEEGL----NSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQK- 180
D+ EE + N L + K++N +TY+RM+ + +LS+ P L+ +L E
Sbjct: 134 VDESSEEKILNIINDNLWIVKISNSITYKRMESTMRKLSE--LETPNE-LLQILLNETSY 190
Query: 181 --PTVLKKDIAF---KPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQ 235
P+ K + ++ K FN L+ SQK+AI+ +L+S + ++HGPPGTGKT T++E+ILQ
Sbjct: 191 TPPSAGKLESSYEQIKFFNDGLNQSQKNAINFSLNSP-ISIIHGPPGTGKTYTLIELILQ 249
Query: 236 EVKRGSKILACAASNIAVDNIVERL---VPHRVRLVRLGHPARLLPQVLESALDAQVLRG 292
V +G ++L C SNI+VD I+ERL +P L+R+GHPARLL L+ LD
Sbjct: 250 LVSKGERVLVCGPSNISVDTILERLNGKLPGD-ELLRIGHPARLLNSNLQHCLDIVTNTS 308
Query: 293 DNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADV 352
D+ L +DI+KE+ K+ KT+ ++ I +E++ L KE +KR++ +VI A V
Sbjct: 309 DSGQLIADIKKEIDDTIKKIKKTRSYKEKKSIWQEVKELRKELKKREKTVTHEVILKAKV 368
Query: 353 VLTTLTGAVSRKLDNTS--------FDLVIIDEAAQALEIACWIALLK--GS---RCILA 399
++ TL G+ SR L + FD +IIDE +Q+LE CWI L+ GS + +LA
Sbjct: 369 IMATLHGSSSRDLLSIYNHQPGLKLFDTIIIDEVSQSLEPQCWIPLINHYGSNVKKLVLA 428
Query: 400 GDHLQLPPTVQ-----SVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSS 454
GD+ QL PT++ SVE + L T+F+RL +YGD ++L +QYRM+E IM +SS
Sbjct: 429 GDNKQLSPTIKIDNNPSVE---RILSTTIFDRLVSIYGDSFKNLLNIQYRMNESIMKFSS 485
Query: 455 KQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEK--KDEED---ST 499
K LY ++KA S V++ TE ++ D G D EK D D S
Sbjct: 486 KVLYGGELKADESVSNILLTDFPEVEKNDYTEFPIIWYDTQG-DFPEKDSSDHNDLIPSK 544
Query: 500 MNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGF 559
N+ EA V H K L++SGV IGII+PY AQV LK L D +E+STVDGF
Sbjct: 545 FNDMEAYVVKFHLKHLLKSGVKEEHIGIISPYNAQVSFLKKLIHND--WPRVEISTVDGF 602
Query: 560 QGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSD-GFLKRL 618
QGREKE II+++VRSN K+VGFL D +R+NVA+TR +RQ C+V D ET++ FL
Sbjct: 603 QGREKEVIILTLVRSNLNKDVGFLKDEKRLNVAITRPKRQLCIVGDMETINQGCKFLHDW 662
Query: 619 IEYFEEHAEYL 629
+E+ EE+ E +
Sbjct: 663 VEWNEENCELI 673
>gi|344295466|ref|XP_003419433.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2-like
[Loxodonta africana]
Length = 931
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/412 (49%), Positives = 271/412 (65%), Gaps = 17/412 (4%)
Query: 241 SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
SK+L CA SNIAVDN+VERL R++RLGHPARLL + + +LDA + R D++ + +D
Sbjct: 163 SKVLCCAPSNIAVDNLVERLAHCEQRVLRLGHPARLLESIQQHSLDAVLARSDSAQIVAD 222
Query: 301 IRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA 360
IRKE+ + K KT+DK + + EL+ L KE ++R++ A+ + +A VVL T TGA
Sbjct: 223 IRKEIDQVFVKNKKTQDKREKGNFRNELKQLRKELKEREEAAMLQSLTSAHVVLATNTGA 282
Query: 361 VS----RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEK 416
S + L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPTV S +A
Sbjct: 283 SSDGPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTVISHKAGL 342
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS--------- 467
GL +L ERLA+ +G+ +LTVQYRMH+ I W+S+ LY ++ AHPS
Sbjct: 343 AGLSLSLMERLAEQHGERAVRLLTVQYRMHDAISQWASEALYGGQLTAHPSVAQHLLRDL 402
Query: 468 -GVKRTSSTEPTLLLIDIAGCDMEE-KKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDI 525
GV T T LLLID AGC + E ++EE S N GE + H + L+ +GV A DI
Sbjct: 403 PGVAPTEETAVPLLLIDTAGCGLFELDEEEEQSRGNPGEVRLVSLHVQALVDAGVPARDI 462
Query: 526 GIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSD 585
+ITPY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++
Sbjct: 463 AVITPYNLQVDLLR--QSLAHRYPELEMKSVDGFQGREKEAVILSFVRSNRKGEVGFLAE 520
Query: 586 RRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
RR+NVAVTRARR +VCD+ TV++ FLK L+ YF EH E + EYL++
Sbjct: 521 DRRINVAVTRARRHVAIVCDSRTVTNHAFLKTLVGYFTEHGEVRTAFEYLDD 572
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 88/151 (58%), Gaps = 9/151 (5%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ +++ FV+ L+ LE++AE+ + S +L Q +G +L L+ + +TGL G
Sbjct: 2 ASAAVESFVTKQLELLALERDAEVEERRSWQESVSLKELQSRGVCLLKLQVSNQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
K L F+ + VLP++ F + D+V L + A+ GSP L G++ R+ +S TVAFD
Sbjct: 62 KLLATFEPRRCGSAAVLPSNSFTSGDIVGLY-DGANEGSP-LATGILTRVTQTSATVAFD 119
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKD 154
+ L+ + RL KLAN+VTY+R+K+
Sbjct: 120 ESQHFQLSLERENSYRLLKLANDVTYQRLKN 150
>gi|156839982|ref|XP_001643676.1| hypothetical protein Kpol_1057p6 [Vanderwaltozyma polyspora DSM
70294]
gi|156114297|gb|EDO15818.1| hypothetical protein Kpol_1057p6 [Vanderwaltozyma polyspora DSM
70294]
Length = 679
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 251/664 (37%), Positives = 364/664 (54%), Gaps = 75/664 (11%)
Query: 29 EKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKG--DVLPA 86
E++ +I A+ L K G I NL + +TGL GK LE + D +
Sbjct: 16 ERDQDIEATSQLLKLLPLPKLVKAGQAINNLYLENIRTGLAGKIYLELGPYQAVDDEISK 75
Query: 87 HKFGTHDVVVLKPN--------------------KADLGSPALG-QGVVYRLKDSSITVA 125
DVV +KP+ +D G+ L GVV+++ D ++
Sbjct: 76 GSIKVGDVVAVKPSATSKGKSKAKTKSSKAEENGDSDRGADDLEITGVVFKITDKQCSIT 135
Query: 126 FDDIPEEGL-----NSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVL----- 175
D+ E+ S L L K N +TY+RM+ + +L K + P +I L
Sbjct: 136 IDEAQEQDAMKLYSYSKLYLLKTVNTITYKRMESTMRKL-KEFEGLPDNRIIEYLLNARQ 194
Query: 176 FGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQ 235
F Q+P+ I F N L+ SQKDAI AL++ ++ ++HGPPGTGKT T+VE+ILQ
Sbjct: 195 FIRQEPS---NKITFH--NDQLNESQKDAIKFALAN-DISIIHGPPGTGKTYTLVELILQ 248
Query: 236 EVKRGSKILACAASNIAVDNIVERL---VPHRVRLVRLGHPARLLPQVLESALDAQVLRG 292
V++G ++L C SNI+VD I+ERL +P + L+R+GHPARLL L +LD G
Sbjct: 249 LVEKGQRVLVCGPSNISVDTILERLAKVLPGNL-LLRIGHPARLLEANLSHSLDILSKSG 307
Query: 293 DNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADV 352
D+ ++ DI +++ + K + + RRE KE++ L KE R+R++ V D+I A V
Sbjct: 308 DSGAIVRDIYRDIDKTIASIKKVRKPDARREGWKEVKELRKELRQRERKVVNDLILEAKV 367
Query: 353 VLTTLTGAVSRKLDNTS------FDLVIIDEAAQALEIACWIALLKG-----SRCILAGD 401
V+ TL G+ SR+L FD +IIDE +Q+LE CWI L+ ++ +LAGD
Sbjct: 368 VVATLHGSSSRELCGIYNQVPKLFDTLIIDEVSQSLEPQCWIPLISHYKSDFTKLVLAGD 427
Query: 402 HLQLPPTVQSVEAEKK--GLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYN 459
+ QLPPT+++ + +K LG TLF+RL YGD+ +L VQYRM+E IM + SKQ+Y
Sbjct: 428 NKQLPPTIKTEDNDKVKVTLGTTLFDRLVKNYGDQFKLLLNVQYRMNEQIMEFPSKQMYG 487
Query: 460 SKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEED----STMNEGEA 505
K+ A S GV T P L+ D G D E+ D ED S NE E
Sbjct: 488 GKLIADASVANNVLSDLPGVDSNDDTLPPLIWYDTQGDDFLEQADNEDGIVSSKFNENEV 547
Query: 506 EVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKE 565
+ H +LI+S V IG+I+PY+AQ LLK L + L +E+STVDGFQGREKE
Sbjct: 548 LLVKDHIIKLIESNVPQDAIGVISPYSAQTSLLKSLIQEQYPL--IEISTVDGFQGREKE 605
Query: 566 AIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG--FLKRLIEYFE 623
I++S+VRSN K EVGFL D RR+NVA++R ++Q C++ + E + G FLK E+
Sbjct: 606 VIVLSLVRSNDKMEVGFLRDDRRLNVAISRPKKQLCVIGNMEVLERSGVKFLKNWAEWSS 665
Query: 624 EHAE 627
E+++
Sbjct: 666 ENSD 669
>gi|50293567|ref|XP_449195.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528508|emb|CAG62165.1| unnamed protein product [Candida glabrata]
Length = 695
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 246/648 (37%), Positives = 364/648 (56%), Gaps = 77/648 (11%)
Query: 53 GSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQG 112
G I NL +++TGL GK ++E T+ + + D+V++KP + QG
Sbjct: 41 GLAISNLTVTNSRTGLAGKLVIELAQTQSTPV-SSDLKNGDIVIIKPYSKKEDNDQQCQG 99
Query: 113 VVYRLKD--------SSITVAFDDIPEE------GLNSPLRLEKLANEVTYRRMKDALIQ 158
VV ++ + +S+ +A D+ E N + K N VTY RM L +
Sbjct: 100 VVVKISNAESNSTSPTSLAIAIDESQENIATTMIHSNEKFYVMKTVNTVTYDRMNSTLRK 159
Query: 159 LSKGVQNGPAAGLIPVLF---GEQK-----PTVLKKDIAFKPFNSNLDHSQKDAISKALS 210
L + + + +I +L G +K P K +I F F+ NL+ SQK AI ++
Sbjct: 160 LKEFKEKSISNPIIDILLPTEGVKKLRASIPNAKKSNIQF--FDENLNDSQKYAIRFSME 217
Query: 211 SKNVFMLHGPPGTGKTTTVVEIILQEVKRGS--KILACAASNIAVDNIVERL---VPHRV 265
+K + ++HGPPGTGKT TVVE+I Q + + S ++L CA SNIAVD I+ERL + +
Sbjct: 218 NK-LSIIHGPPGTGKTYTVVELIRQLISKDSTSRVLVCAPSNIAVDTILERLSKSIKDKR 276
Query: 266 RLVRLGHPARLLPQVLESALDAQVLRG-DNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
L+R+GHPARLL +LD G D++S+ +DI E+ + K RR+
Sbjct: 277 WLLRIGHPARLLKTNWYHSLDILSKEGTDSASIINDISMEITKTIASIKSIKSSGERRKA 336
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS-----------FDLV 373
E++ L KE R R++ + D+IK + VV+ TL G+ SR+L N FD V
Sbjct: 337 WAEVKQLRKELRLRERKVINDLIKQSRVVVATLHGSSSRELCNYYKSIEEGENDNLFDYV 396
Query: 374 IIDEAAQALEIACWIALL-----KGSRCILAGDHLQLPPTVQSVEAEK--KGLGRTLFER 426
IIDE +Q+LE CWI L+ K ++ +LAGD QLPPT+++ +K K LG TLF+R
Sbjct: 397 IIDEVSQSLEPQCWIPLISHLQSKITKLVLAGDSKQLPPTIKTNNNDKVMKVLGTTLFDR 456
Query: 427 LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTE 476
L ++YGDE ++L +QYRM+ IM +SSK +YN ++KA S GV T+
Sbjct: 457 LVNMYGDEFKNLLNIQYRMNAKIMEFSSKAMYNGELKADSSVENIVLSDLPGVDSNEETD 516
Query: 477 PTLLLIDIAGCDMEEKKDEED------------STMNEGEAEVAMAHAKRLIQSGVHASD 524
++ D G D E +EED S +N EA + + H ++LI+S V
Sbjct: 517 EPIIWYDTQGDDFPEVDEEEDELKSKSAKFLYSSKLNTNEAYLVLHHVRKLIESNVQQDC 576
Query: 525 IGIITPYAAQVVLLKIL--RSKDDKLKNM-EVSTVDGFQGREKEAIIISMVRSNSKKEVG 581
IGII+PY AQV LLK L ++D + + E+S+VDGFQGREKE II+S+VRSN K EVG
Sbjct: 577 IGIISPYNAQVSLLKKLVNGTEDSPVYPLIEISSVDGFQGREKECIILSLVRSNDKAEVG 636
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETV--SSDGFLKRLIEYFEEHAE 627
FL ++RR+NVA+TR +RQ C++ + ET+ S + FLK E+ E++A+
Sbjct: 637 FLKEQRRLNVAMTRPKRQLCVIGNIETLQRSGNSFLKDWTEWSEDNAD 684
>gi|409078031|gb|EKM78395.1| hypothetical protein AGABI1DRAFT_101114 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 754
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 265/749 (35%), Positives = 382/749 (51%), Gaps = 141/749 (18%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
++ F+ L+ E+ AEI S ++ ++KG ++ L + GL GKTL
Sbjct: 5 NITAFIDCQRVLLTKERLAEIERSSLLLSNCGPKLLEQKGLSLGGLGVANINIGLGGKTL 64
Query: 74 LEFQSTKG----DVLPAHKFGTHDVVVLKPN-------KADLGSPA-------LGQGVVY 115
+E + P H F D+ ++PN K +PA +GVVY
Sbjct: 65 VELDRPTAYHTSPLFPPHTFRPGDLARIEPNVSGNAPAKKPKKTPAGDEKVQQEAEGVVY 124
Query: 116 RLKDSSITVAFDDIPEEG----LNSP--LRLEKLANEVTYRRMKDALIQLSKGVQN---- 165
++ D+ I +A D P EG LN P R+ KLAN VTY RM A+ +L K V+
Sbjct: 125 KVSDTRIVIAID--PAEGSSDDLNLPERCRVIKLANSVTYDRMDKAIDRLEKIVEGRSDN 182
Query: 166 --GPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGT 223
LI VL G P+ A F+ +L+ SQK+AI L S V +HGPPGT
Sbjct: 183 KFAQMTSLIQVLLGIHPPSERNHISAITFFDDSLNESQKEAIKFCLESPEVACIHGPPGT 242
Query: 224 GKTTTVVEIILQ------EVKRGSKILACAASNIAVDNIVERLVP-------HRVRLVRL 270
GKT T++E+I Q ++L C ASN++VDNI+ERL+ ++++ R+
Sbjct: 243 GKTHTLIEVIRQLTTVTPSNPTPKRVLVCGASNLSVDNIMERLLALPASEKGEKLKVTRI 302
Query: 271 GHPARLLPQ--VLESALDAQVLRGDNSSLASDIRKEMKA-LNGKLLKTKDKNT------- 320
GHPAR++ +L+S L+ Q R D ++LA D++ E++A LN LL K K
Sbjct: 303 GHPARVMSHQGILDSTLEVQATRTDQAALAKDVKNELEATLN--LLSGKGKGAKGKPPRG 360
Query: 321 --RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEA 378
R+++ +E++ L KE R+R+ V V+ A VVL+T + R+L + FD+VIIDEA
Sbjct: 361 AERKKLWEEVKALRKEYRQREGGVVKSVLSEAQVVLSTCHTSGGRQLQSHDFDVVIIDEA 420
Query: 379 AQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAE-------------KKG------- 418
QALE CWI + K + ILAGD +QLPPT+ S+ E KKG
Sbjct: 421 TQALEAVCWIPIFKARKLILAGDPMQLPPTIISINQETESKTMKRATQTSKKGSKVAAKD 480
Query: 419 --------------------------------------LGRTLFERLADLYGDEVTSMLT 440
L TLF+RL +YG + ML
Sbjct: 481 PSSSPDSEDKAGSPGDDMPKVNVPATRKPQPVLLPPHTLETTLFDRLEQMYGPRIKRMLQ 540
Query: 441 VQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLL-----LIDI 484
VQYRMH I + S+ LY+SK+++H P+ + LL D
Sbjct: 541 VQYRMHAQICEFPSETLYSSKLRSHESVASHLLDDLPNASAESEDDSKELLQTPVVFFDT 600
Query: 485 AGCDMEEKKD----EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL-K 539
AGC+ E+ + +E S NE EA V +LI +G+++S I IITPY AQV LL
Sbjct: 601 AGCEYFERVNSTDGDEGSRSNENEATVVSNWVDKLIGAGINSSQIAIITPYQAQVTLLTS 660
Query: 540 ILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 599
++R K +E+ TVDG QGREKEAIIIS+VRSN +EVGFL ++RR+NVA+TRARR
Sbjct: 661 LIRPKYGS--ELEIGTVDGMQGREKEAIIISLVRSNDTREVGFLKEKRRLNVAMTRARRH 718
Query: 600 CCLVCDTETVSSDG-FLKRLIEYFEEHAE 627
C+V D+ TV+ G +LK+ + + + +A+
Sbjct: 719 LCIVGDSSTVTHGGAYLKKWVAWLDNNAD 747
>gi|226291739|gb|EEH47167.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 724
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/551 (38%), Positives = 314/551 (56%), Gaps = 76/551 (13%)
Query: 111 QGVVYRLKDSSITVAFDDIPEEG-----------LNSPLRLEKLANEVTYRRMKDALIQL 159
+GVV R+ + S+ VAF + + G + + KLAN++TYRRMK + ++
Sbjct: 160 EGVVTRVGERSVWVAFSERGDLGKGRDEESVEDLWARKVWMVKLANDITYRRMKQTMTKM 219
Query: 160 SKGVQNGPAAGLIPVLFGEQKPTVLKKD----IAFKPFNSNLDHSQKDAISKALSSKNVF 215
+ + + V+FG P+ + D I F + L+ SQ++AI AL+S+ +
Sbjct: 220 -ENMTESEYTYFMRVVFGHTTPSPVDMDSIGTIDF--IDPTLNDSQREAIRFALASREIA 276
Query: 216 MLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPAR 275
++HGPPGTGKT T++E+ILQ ++R ++L C SN++VDNIVERL PH+V LVR+GHPAR
Sbjct: 277 LIHGPPGTGKTYTLIELILQLLRRNLRVLVCGPSNVSVDNIVERLAPHKVPLVRIGHPAR 336
Query: 276 LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEE 335
LL +L+ +L+ D +++ D+RKE++ + KT+ RREI ++L+ L KE
Sbjct: 337 LLSTILDYSLEVLTQTSDAAAIVKDVRKEIEIKQASIRKTRSGRERREIYRDLKELRKEF 396
Query: 336 RKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR 395
R+R+ V +++ ++ VVL TL GA +L N FD+VIIDEA+QALE CW+ LL ++
Sbjct: 397 REREAKCVGNLVTDSKVVLATLHGAGGHQLRNQKFDVVIIDEASQALEAQCWVPLLSATK 456
Query: 396 CILAGDHLQLPPTVQSVEAEKKG--------------------------------LGRTL 423
ILAGDHLQLPPT++SV + G L TL
Sbjct: 457 AILAGDHLQLPPTIRSVPLKSNGAESGKSNGEEKATLSADKDSSVGQHKATKGVTLEVTL 516
Query: 424 FERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS-----------GVKRT 472
F+RL L+G + MLT QYRMHE IM + SK+LY SK+ A + V T
Sbjct: 517 FDRLLSLHGPAIKRMLTTQYRMHEKIMKFPSKELYESKLVAADAVKLRLLKDLQYEVAET 576
Query: 473 SSTEPTLLLIDIAGCDMEEKKDEE-------------DSTMNEGEAEVAMAHAKRLIQSG 519
T L+ D G D E+ +E +S N+ EA V H + L+ +G
Sbjct: 577 DDTREPLVFYDTQGGDFPERTEEPAVESKQKQEPMFAESKSNDMEAAVVSRHVENLVATG 636
Query: 520 VHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKE 579
V DI ++TPY AQ+ +L L DK +E+ +VDGFQGREKEA+I+S+VRSN + +
Sbjct: 637 VKPEDIAVVTPYNAQLAILSQLLG--DKHPGIELGSVDGFQGREKEAVIVSLVRSNPEHK 694
Query: 580 VGFLSDRRRMN 590
VGFL ++RR+N
Sbjct: 695 VGFLGEKRRLN 705
>gi|119497825|ref|XP_001265670.1| DNA helicase, putative [Neosartorya fischeri NRRL 181]
gi|119413834|gb|EAW23773.1| DNA helicase, putative [Neosartorya fischeri NRRL 181]
Length = 713
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 229/541 (42%), Positives = 318/541 (58%), Gaps = 66/541 (12%)
Query: 111 QGVVYRLKDSSITVAF------------DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQ 158
+GVV R+ + SI +AF D+ EE L L KLAN+VT+RRM + +
Sbjct: 147 EGVVTRVGERSIWIAFGQRGGGGRSKEDDEAIEELWGKKLWLIKLANDVTFRRMNQTMEK 206
Query: 159 LSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPF---NSNLDHSQKDAISKALSSKNVF 215
++K + + + + V FG P D A P + L+ SQK+AI AL+S++V
Sbjct: 207 MAK-MTDSDYSHFMRVAFGHTAPMQPDYD-AIGPVEFVDPTLNDSQKEAIRFALASRDVA 264
Query: 216 MLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPAR 275
++HGPPGTGKT T++E+ILQ VKR ++L C SN++VDNIVERL P+ V +VR+GHPAR
Sbjct: 265 LIHGPPGTGKTHTLIELILQMVKRKLRVLVCGPSNVSVDNIVERLAPNGVPVVRIGHPAR 324
Query: 276 LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEE 335
LLP VLE +L+ + +++ D+RKE+ + KT+ RR I +L+ L +E
Sbjct: 325 LLPSVLEHSLEVLTHTSEAAAIVKDVRKEIDEKQASIRKTRTGRERRAIYDDLKELRREF 384
Query: 336 RKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR 395
R+R+ V ++++ ++VVL TL GA +L N FD+V+IDEA+QALE CWI LL S+
Sbjct: 385 RERESRCVDNLVRESNVVLATLHGAGGHQLKNQKFDVVVIDEASQALEAQCWIPLLPASK 444
Query: 396 CILAGDHLQLPPTVQ-SVE--------------------AEKKG---LGRTLFERLADLY 431
+LAGDHLQLPPTV+ SVE AE G L TLF+RL L+
Sbjct: 445 VVLAGDHLQLPPTVKSSVEKSKNAKKKGKSDTKDASASSAEIIGDFSLETTLFDRLLSLH 504
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLL 480
G + MLT QYRMHE IM + S +LY SK+ A P V+ T T ++
Sbjct: 505 GPGIKRMLTTQYRMHEKIMQFPSNELYESKLIAAEAVKSRLLKDLPYQVEETDDTREPVV 564
Query: 481 LIDIAGCDMEEKKDEED----------STMNEGEAEVAMAHAKRLIQSGVHASDIGIITP 530
D G D EK +++D S NE EA V H + LIQ+GV DI ITP
Sbjct: 565 FWDTQGGDFPEKTEDDDVGKKEALLGESKSNEMEALVVAKHVQNLIQAGVKPEDIACITP 624
Query: 531 YAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRM 589
Y Q+ LL +LR +K +E+ +VDGFQGREKEA+++S+VRSNS+ EVGFL ++RR+
Sbjct: 625 YNGQLALLSSMLR---EKYPGLELGSVDGFQGREKEAVVVSLVRSNSEHEVGFLGEKRRL 681
Query: 590 N 590
N
Sbjct: 682 N 682
>gi|115372685|ref|ZP_01459992.1| superfamily I DNA/RNA helicase [Stigmatella aurantiaca DW4/3-1]
gi|310823878|ref|YP_003956236.1| DNA helicase [Stigmatella aurantiaca DW4/3-1]
gi|115370406|gb|EAU69334.1| superfamily I DNA/RNA helicase [Stigmatella aurantiaca DW4/3-1]
gi|309396950|gb|ADO74409.1| DNA helicase [Stigmatella aurantiaca DW4/3-1]
Length = 640
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 235/642 (36%), Positives = 356/642 (55%), Gaps = 40/642 (6%)
Query: 18 FVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQ 77
F + L+ LE+EAE + S S L ++G ++L+L+ V+ + GL G+ L+
Sbjct: 7 FFDQLGRLLSLEREAERARSAALSESLTLRERAEQGLSVLDLESVEEEVGLGGRILVTLA 66
Query: 78 STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIP----EEG 133
P + D V + P +A++ PA Q +V R + + +AFD P EG
Sbjct: 67 RADRAPFPT-RIHNGDSVAVMPRRAEVKEPA--QALVSRATRTRLQLAFDRSPPPFLHEG 123
Query: 134 LNSPLRLEKLANEVTYRRMKDALIQ---LSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAF 190
L LRL+ + N+VTY RM+ L + L KGV+ VL G + P K A
Sbjct: 124 L---LRLDVVPNDVTYERMRAGLARVKALDKGVERRRRE----VLLGNEPPRFEKPSDA- 175
Query: 191 KPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASN 250
P + L+ Q DA+S+AL++++ F++HGPPGTGK+T + E+ +Q V RG ++L AASN
Sbjct: 176 -PPSRPLNPEQADAVSRALAAEDFFLVHGPPGTGKSTVLAEVAVQAVARGERLLCTAASN 234
Query: 251 IAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG 310
AVD+++E + +R +R+GHPAR+ P+ E LD V + L+ ++ E +L G
Sbjct: 235 AAVDHLLELCLEQGLRAIRVGHPARVAPRFQEHTLDIVVEEHPDRVLSRELFDEAFSLFG 294
Query: 311 KLLKTKDKNTRRE-------IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSR 363
+ + + RE E + L + R ++ AV V++ A V+ TL S
Sbjct: 295 YARRQRTQGRSRERFSNARSSTAEAKGLMDDARALERKAVRAVLERAQVICVTLASLGSG 354
Query: 364 KLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTL 423
L + FD +IDEA QA E + L+ + +LAGD QLPPTV S EA K GLG +L
Sbjct: 355 VLAHEEFDRALIDEATQATEPLTLLGFLRAPKLVLAGDPQQLPPTVLSQEAAKAGLGVSL 414
Query: 424 FERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST-------- 475
FERL +G+ V ML QYRM+ IM++ S+++Y ++AHPS +RT +
Sbjct: 415 FERLLQDHGEGVKRMLREQYRMNARIMDFPSREMYGGALRAHPSVAERTLAPVLSPGAEL 474
Query: 476 -EPTLLLIDIAGCDMEEKKDEE-DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAA 533
P +L +D AG EE+++E S N GEA++ +A K L+ +G+ ++ +I PY+A
Sbjct: 475 DAPPVLFLDTAGKGFEEQEEESTHSLFNPGEADLILARVKALLAAGLSPRELAVIAPYSA 534
Query: 534 QVVLLKILRSKDDKLK-NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVA 592
Q LR + + L ++EV TVD FQGREK+AI++S+ RSN+ +GFL+D RRMNVA
Sbjct: 535 QAF---HLRERVEILSPDVEVDTVDAFQGREKDAILVSLTRSNADGNLGFLTDLRRMNVA 591
Query: 593 VTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
+TRARR +V D+ T+S F R IE + Y S E+
Sbjct: 592 MTRARRHLFVVGDSATLSGHPFYARFIEGTQGDGSYRSSWEW 633
>gi|320591247|gb|EFX03686.1| DNA-binding protein smubp-2 [Grosmannia clavigera kw1407]
Length = 737
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 262/753 (34%), Positives = 374/753 (49%), Gaps = 133/753 (17%)
Query: 1 MEGRKTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLK 60
M + + + AV + F + L+ E ++E++ + T+ S Q+ G + NL
Sbjct: 1 MAATEKRTEPMAVDIPAFAAAQLDLLTAELQSEMAETATAIGSHTPAALQRAGLALTNLV 60
Query: 61 CVDAQTGLMGKTLLEF----------QSTKGDVLPAHKFGTHDVVVL--KPNKA------ 102
+TG+ G+T+L S G LP H T D+V++ +P +
Sbjct: 61 VDGRRTGMGGRTVLTLVRDGALSVAKNSEDGSELPEHGLRTGDIVLVAEQPGGSAKKREM 120
Query: 103 ----DLGSPALGQGVVYRLKDSSITVAFDDIPEEG---------LNSPLRLEKLANEVTY 149
GS +GV+ R++ + + V D + L + L KLA++VT+
Sbjct: 121 RELEQRGS----RGVITRVRRTGLDVGLDQGDSDSSREEAVDVLLAGRVWLVKLADDVTF 176
Query: 150 RRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKD---IAFKPFNSNLDHSQKDAIS 206
RRM A +Q + + + L+ VLFG+ P+ ++ A + + +LD SQ+ A+
Sbjct: 177 RRMS-AAMQTLQTMPSSEYTSLMRVLFGQASPSPAARENEEDAIRWIDGSLDASQRAAVR 235
Query: 207 KALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVR 266
AL++ V ++HGPPGTGKT +VE++LQ V RG ++L C SNIAVDN+VERL PH V
Sbjct: 236 FALAAPEVALIHGPPGTGKTHALVELVLQLVGRGQRVLVCGPSNIAVDNLVERLGPHGVP 295
Query: 267 LVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG---------KLLKTKD 317
+VRLGHPARLLP V ALD + ++ D+R +M KL
Sbjct: 296 MVRLGHPARLLPSVAGYALDVLTQTSEAGAIVRDVRADMDRQQDELRQLQKGQKLSAAAR 355
Query: 318 KNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKL-----DNTS--F 370
+ RR + ELR L +E R R++ V D++ + VVL TL GA +L D S F
Sbjct: 356 RAARRSVYGELRALRREYRDRERRCVHDLVAGSRVVLATLHGAGGSQLRVAAGDQASRNF 415
Query: 371 DLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSV------------------ 412
D+V+IDE QALE CW+ALL + + AGDHLQLPPTV+S
Sbjct: 416 DVVVIDEVGQALEAQCWVALLGARKVVCAGDHLQLPPTVKSRGSGGGGGKKKGGKGKGGS 475
Query: 413 --------------EAEKKG-----LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWS 453
EAE + L TLF+RL L+GD + MLT QYRMHE IM +
Sbjct: 476 GKGEKGKSEKEDGKEAENEAHTTLSLEYTLFDRLLALHGDSIKRMLTTQYRMHERIMRFP 535
Query: 454 SKQLYNSKIKAHPSGVKR------------------TSSTEPTLLLIDIAGCDMEEKKDE 495
S LY + A + R T T L+ ID G D E
Sbjct: 536 SDTLYGGHLVAAEAVAGRLLRDLRYGDADDGCPVADTDDTREPLVFIDTQGGDFAEGDQT 595
Query: 496 E---------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDD 546
DS N EA + H + L+ +GV DI ++TPY+AQV LL L++
Sbjct: 596 SEQTSRGKLTDSKHNTLEAALVRQHVRALVAAGVRPQDIAVVTPYSAQVALLAPLKT--- 652
Query: 547 KLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 606
L +EV TVDGFQGREKEA+++S+VRSN +VGFL+DRRR+NVA+TR +R ++ D+
Sbjct: 653 ALAGLEVGTVDGFQGREKEAVVLSLVRSNLTADVGFLADRRRLNVAMTRPKRSLTVIGDS 712
Query: 607 ETVSSDGFLKRLIEYFEEHAE--YLSGSEYLNE 637
ET + + EEHA+ Y SE E
Sbjct: 713 ET---------WMAFLEEHADLRYPDSSEAAAE 736
>gi|449131912|ref|ZP_21768086.1| DNA-binding protein SMUBP-2 [Rhodopirellula europaea 6C]
gi|448888721|gb|EMB19023.1| DNA-binding protein SMUBP-2 [Rhodopirellula europaea 6C]
Length = 734
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 254/672 (37%), Positives = 361/672 (53%), Gaps = 71/672 (10%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLE 75
+++ +A +DLE EAE + R+ + G I+ L VD TGL G+ LL+
Sbjct: 70 EDYFEQLAIWLDLEAEAERARLAKLRQIRSQRDVESTGQAIVGLDMVDYHTGLAGRYLLD 129
Query: 76 FQSTKGDVLPAH--KFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEG 133
G LP + K G+ V+ + + +D G GVV R K+ SI +A D P
Sbjct: 130 LAKPGGKDLPMNRLKVGSPVVLSMDDDPSDEGI----AGVVSRRKNHSIQIATDTFPVRD 185
Query: 134 ---------------------LNSPLRLEKLANEVTYRRMKDALIQLSKGVQ-NGPAAGL 171
++ RL+ +E T R L ++K + G + L
Sbjct: 186 QDDLKKKGVGKHGKSGQRPAVVSDRFRLDMSPDETTRLRQ---LAAMAKAQEIRGRSGKL 242
Query: 172 IPVLFGEQKPTVLKKDI--------AFK------PFNSNLDHSQKDAISKALSSKNVFML 217
VL G + P V I +F+ F + L+ Q+DA++ A+ + +V ++
Sbjct: 243 RDVLLGIKTPRVDGNPIDTHEIDPESFQFELNDIDFRTELNPPQRDAVAFAMMADDVAII 302
Query: 218 HGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLL 277
HGPPGTGKTTT+ EII Q V+RG ++LACAASN AVDN++ERLV +VR+GHPAR+
Sbjct: 303 HGPPGTGKTTTIAEIIAQSVERGERVLACAASNTAVDNLLERLVRLMPNVVRVGHPARVF 362
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT------KDKNTRREIQKELRTL 331
+ E LDA V S++ D+R+E+ + + + +++ R E+ E L
Sbjct: 363 ESLQEHTLDALVESDPTSTVIKDLRRELDQILREANRPIRAGGGRERKQRSELFNEAGRL 422
Query: 332 SKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL 391
R +++ V VI ADV+ TT T L + SFDLV++DE+ Q E W A+L
Sbjct: 423 RGMIRSQERGIVRSVIDRADVICTTTT-IDEELLSDQSFDLVVVDESCQCTEPGMWQAIL 481
Query: 392 KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN 451
+ R ILAGDH QLPPTV S +A K G+ +L +RL YG+ + LTVQYRM+E IM
Sbjct: 482 RADRLILAGDHCQLPPTVLSDDAAKIGMRDSLMQRLVHRYGERIYRRLTVQYRMNESIMR 541
Query: 452 WSSKQLYNSKIKAHPSGVKRTS------------STEPTLLLIDIAGCDMEEKKDEE-DS 498
+SS Y+S + A S VKR +TEP LLLID AG EE+ + + S
Sbjct: 542 FSSDHFYDSTLIADAS-VKRHRLCDLPNVEENDFTTEP-LLLIDTAGAGYEEELEPDGQS 599
Query: 499 TMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDG 558
+N GEA+V + K+L GV I +I PYAAQV + LR + D L +E+ TVDG
Sbjct: 600 KLNHGEAKVILQLVKQLADMGVTGDQIAVIAPYAAQV---RNLRMRLD-LDGIEIDTVDG 655
Query: 559 FQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRL 618
FQGREKE ++I+M RSN E+GFLSD+RR NVA+TRA+R+ +V D+ T+ S F L
Sbjct: 656 FQGREKEVVLITMTRSNPDGEIGFLSDQRRSNVALTRAKRKLIVVGDSATLCSHDFYSDL 715
Query: 619 IEYFEEHAEYLS 630
YFE+ Y S
Sbjct: 716 YGYFEDAGAYHS 727
>gi|421612070|ref|ZP_16053189.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SH28]
gi|408497130|gb|EKK01670.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SH28]
Length = 734
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 254/672 (37%), Positives = 361/672 (53%), Gaps = 71/672 (10%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLE 75
+++ +A +DLE EAE + R+ + G I+ L VD TGL G+ LL+
Sbjct: 70 EDYFEQLAIWLDLEAEAERARLAKLRQIRSQRDVESTGQAIVGLDMVDYHTGLAGRYLLD 129
Query: 76 FQSTKGDVLPAH--KFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEG 133
G LP + K G+ V+ + + +D G GVV R K+ SI +A D P
Sbjct: 130 LAKPGGKDLPMNRLKVGSPVVLSMDDDPSDEGI----AGVVSRRKNHSIQIATDTFPVRD 185
Query: 134 ---------------------LNSPLRLEKLANEVTYRRMKDALIQLSKGVQ-NGPAAGL 171
++ RL+ +E T R L ++K + G + L
Sbjct: 186 QDDLKKKGVGKHGKSGQRPAVVSDRFRLDMSPDETTRLRQ---LAAMAKAQEIRGRSGKL 242
Query: 172 IPVLFGEQKPTVLKKDI--------AFK------PFNSNLDHSQKDAISKALSSKNVFML 217
VL G + P V I +F+ F + L+ Q+DA++ A+ + +V ++
Sbjct: 243 RDVLLGIKTPRVDGNPIDTHDIDPESFQFELNDIDFRTELNPPQRDAVAFAMMADDVAII 302
Query: 218 HGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLL 277
HGPPGTGKTTT+ EII Q V+RG ++LACAASN AVDN++ERLV +VR+GHPAR+
Sbjct: 303 HGPPGTGKTTTIAEIIAQSVERGERVLACAASNTAVDNLLERLVRLMPNVVRVGHPARVF 362
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT------KDKNTRREIQKELRTL 331
+ E LDA V S++ D+R+E+ + + + +++ R E+ E L
Sbjct: 363 ESLQEHTLDALVESDPTSTVIKDLRRELDQILREANRPIRAGGGRERKQRSELFNEAGRL 422
Query: 332 SKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL 391
R +++ V VI ADV+ TT T L + SFDLV++DE+ Q E W A+L
Sbjct: 423 RGMIRSQERGIVRSVIDRADVICTTTT-IDEELLSDQSFDLVVVDESCQCTEPGMWQAIL 481
Query: 392 KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN 451
+ R ILAGDH QLPPTV S +A K G+ +L +RL YG+ + LTVQYRM+E IM
Sbjct: 482 RADRLILAGDHCQLPPTVLSDDAAKIGMRDSLMQRLVHRYGERIYRRLTVQYRMNESIMR 541
Query: 452 WSSKQLYNSKIKAHPSGVKRTS------------STEPTLLLIDIAGCDMEEKKDEE-DS 498
+SS Y+S + A S VKR +TEP LLLID AG EE+ + + S
Sbjct: 542 FSSDHFYDSTLIADAS-VKRHRLCDLPNVEENDFTTEP-LLLIDTAGAGYEEELEPDGQS 599
Query: 499 TMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDG 558
+N GEA+V + K+L GV I +I PYAAQV + LR + D L +E+ TVDG
Sbjct: 600 KLNYGEAKVILQLVKQLADMGVTGDQIAVIAPYAAQV---RNLRMRLD-LDGIEIDTVDG 655
Query: 559 FQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRL 618
FQGREKE ++I+M RSN E+GFLSD+RR NVA+TRA+R+ +V D+ T+ S F L
Sbjct: 656 FQGREKEVVLITMTRSNPDGEIGFLSDQRRSNVALTRAKRKLIVVGDSATLCSHDFYSDL 715
Query: 619 IEYFEEHAEYLS 630
YFE+ Y S
Sbjct: 716 FGYFEDAGAYHS 727
>gi|254580966|ref|XP_002496468.1| ZYRO0D00770p [Zygosaccharomyces rouxii]
gi|238939360|emb|CAR27535.1| ZYRO0D00770p [Zygosaccharomyces rouxii]
Length = 655
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 235/620 (37%), Positives = 357/620 (57%), Gaps = 53/620 (8%)
Query: 51 KKGSTILNLKCVDAQTGLMGKTLLEF--------QSTKGDVLPAHKFGTHDVVVLKPNKA 102
K G I NL + +TGL GK LE + +GDV K G D+V++ P K+
Sbjct: 36 KAGYAITNLNLENLRTGLGGKIYLELGPDNAIDQEIARGDV----KVG--DIVIIAPVKS 89
Query: 103 DLGSPALGQGVVYRLKDSSITVAFDDIPEEG----LNSPLRLEKLANEVTYRRMKDALIQ 158
+ GVV+++ + V+ ++ EE +S L + K N +TY+RM+ ++ +
Sbjct: 90 KFKDESRCNGVVFKMSSQQLVVSIEESMEEEAVKLYSSRLYVLKTTNTITYQRMESSMRK 149
Query: 159 LSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLH 218
L K +++ ++ L + D K N +L+ Q+ AI +LS++ + ++H
Sbjct: 150 L-KEIESLKGNSIVQYLLEGKPFHASAPDPKVKFHNESLNDPQRQAIRFSLSNE-ISIIH 207
Query: 219 GPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERL--VPHRVRLVRLGHPARL 276
GPPGTGKT T+VE+I Q V+RG ++L C SN++VD I+ERL V L+R+GHPARL
Sbjct: 208 GPPGTGKTYTLVELIQQLVERGQRVLVCGPSNVSVDTILERLSKVLPGTSLIRIGHPARL 267
Query: 277 LPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEER 336
L + L +LD GD ++ DI KE+ + K++ + RRE K ++ L KE R
Sbjct: 268 LEKNLTHSLDVLSKTGDAGAIVKDISKEIDQTIASIKKSRSFHDRREGWKTVKDLRKELR 327
Query: 337 KRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS------FDLVIIDEAAQALEIACWIAL 390
R++ + D+I + V++ TL G+ S++L +T FD +IIDE +Q+LE CWI L
Sbjct: 328 LRERKVINDLIMESKVIVATLHGSSSKELLSTYNAIPKLFDTLIIDEVSQSLEPQCWIPL 387
Query: 391 LKG-----SRCILAGDHLQLPPTVQSVEAEK--KGLGRTLFERLADLYGDEVTSMLTVQY 443
+ + +LAGD+ QLPPT+++ + +K K LG TLF+RL YGD +LT+QY
Sbjct: 388 ISHKQSNIGKLVLAGDNKQLPPTIKTEDDKKVQKLLGTTLFDRLIKQYGDSFKQLLTIQY 447
Query: 444 RMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKK 493
RM+E IM+++S+++Y+ K+ A S GV TE L+ D G D E
Sbjct: 448 RMNEEIMSFASQEMYDGKLIADKSVATQRLTDLPGVDVNEDTEAPLIWYDTQGDDFPESS 507
Query: 494 DEED----STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK 549
+E++ S NE EA + H +L+ S V IG+I+PY+AQV ++K L +K
Sbjct: 508 NEDEEIAASRFNENEALLLEDHISKLVGSNVPQDAIGVISPYSAQVGIIKKLIH--EKYP 565
Query: 550 NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
+E+STVDGFQGREKE II+S+VRSN EVGFL D RR+NVA+TR ++Q C+V + ET+
Sbjct: 566 QVEISTVDGFQGREKEVIILSLVRSNDTFEVGFLKDDRRLNVAITRPKKQLCIVGNMETL 625
Query: 610 --SSDGFLKRLIEYFEEHAE 627
S FL+ + EE+AE
Sbjct: 626 ERSRVPFLEHWAHWSEENAE 645
>gi|414884936|tpg|DAA60950.1| TPA: hypothetical protein ZEAMMB73_755312 [Zea mays]
Length = 737
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 253/687 (36%), Positives = 371/687 (54%), Gaps = 88/687 (12%)
Query: 18 FVSVMAPLIDLEKEAEISASI---TSGASRNLD-----------TAQKKGSTILNLKCVD 63
FV M L+ LE++AE+ + S A +D AQ+ G TI NL+ +
Sbjct: 40 FVQQMTGLLRLERDAELELAQDHEVSAAGTVMDGMPKKPVVAHGQAQEDGDTICNLRVIS 99
Query: 64 AQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKP----NKADLGSPALGQGVVYRLKD 119
+ TGL G+ L+ F++ LPA + D V ++ + +P L Q V+ L +
Sbjct: 100 SSTGLTGQHLVLFRAEGSHRLPATRLSPGDTVCVRACDSQGEVAASTPCL-QASVHNLGE 158
Query: 120 S--SITVAFDDIPEEGLNSPL-----------RLEKLANEVTYRRMKDALIQLSK-GVQN 165
SITVAF G R++ LA+ VTY R +AL+ L K G+Q
Sbjct: 159 DGRSITVAFRS--RRGGEPAFSRFPGKFARIDRIQALADAVTYERNCEALMALQKRGLQK 216
Query: 166 GPAA-GLIPVLFGEQKPTVLKKDIAFKPFNSNL---------------------DHSQKD 203
A+ G++ LFG+ K+ A KP ++L D SQ
Sbjct: 217 RNASIGVVATLFGD-------KEDATKPERNSLTDRRGPEAPDGGSLETHSHSFDTSQSR 269
Query: 204 AISKALS-SKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVP 262
A++ AL + V ++ GPPGTGKT + ++ + V+RG ++L A SN AVDN+ E L
Sbjct: 270 ALALALDKERPVLVIQGPPGTGKTRLLSYLVARVVRRGERVLVTAPSNAAVDNMAESLSA 329
Query: 263 HRVR-LVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKL-LKTKDKNT 320
++ +VR+G+P+R+ P V +L Q++ L + AL L + +D
Sbjct: 330 SGLKNIVRVGNPSRISPSVAPMSL-GQIVATRLEKLTREFETRRSALRKDLKRRVQDGGD 388
Query: 321 RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS--FDLVIIDEA 378
++++L+ L K+ RK ++ AV +V+ NA+VVL+T TGA + T FDLVIIDEA
Sbjct: 389 GSSVRQQLKRLGKDYRKEKKEAVREVLANAEVVLSTNTGAADPLVRGTGGCFDLVIIDEA 448
Query: 379 AQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSM 438
QA+E +CWI +L+G RCILAGDH QL P V S EA + GLG +L ER + L+ + +
Sbjct: 449 GQAIEPSCWIPMLQGKRCILAGDHRQLAPVVLSREAMEGGLGMSLLERASSLHDGLLATT 508
Query: 439 LTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIA--- 485
LT QYRMHE I +W+SK++Y+ +++ PS VK T T+ LLL+D
Sbjct: 509 LTTQYRMHESIASWASKEMYDGLLRSFPSVASRLLVNYPSVKVTWMTQCALLLLDTRRAY 568
Query: 486 ---GCDMEEKKDEED--STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKI 540
D EE D S N GEA++ H L+Q GV + I + +PY AQV LL+
Sbjct: 569 GSLNIDCEESLDPAGTGSFYNNGEADIVAHHVLNLVQCGVPPTSIVVQSPYIAQVQLLQD 628
Query: 541 LRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
+ ++EVST+D FQGRE +A++ISMVRSNS EVGFL+DRRRMNVA+TRA+
Sbjct: 629 RLQEYPMAFDVEVSTIDSFQGREADAVVISMVRSNSMGEVGFLADRRRMNVAITRAKSHV 688
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAE 627
+VCDT T+ ++ FL RL+ + +H +
Sbjct: 689 AVVCDTSTICNNAFLARLLLHIRQHGQ 715
>gi|297687967|ref|XP_002821469.1| PREDICTED: DNA-binding protein SMUBP-2, partial [Pongo abelii]
Length = 780
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 194/413 (46%), Positives = 273/413 (66%), Gaps = 17/413 (4%)
Query: 240 GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLAS 299
GS++L CA SNIAVDN+VERL + R++RLGHPARLL + + +LDA + R D++ + +
Sbjct: 18 GSQVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVA 77
Query: 300 DIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
DIRK++ + K KT+ K + + E++ L KE ++R++ A+ + + +A+VVL T TG
Sbjct: 78 DIRKDIDQVFVKNKKTQGKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTG 137
Query: 360 AVS----RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAE 415
A + + L + FD+V+IDE AQALE +CWI LLK +CILAGDH QLPPT S +A
Sbjct: 138 ASADGPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAA 197
Query: 416 KKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS-------- 467
GL +L ERLA+ YG V LTVQYRMH+ IM W+S +Y ++ AHPS
Sbjct: 198 LAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHPSVAGHLLRD 257
Query: 468 --GVKRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASD 524
GV T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A D
Sbjct: 258 LPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARD 317
Query: 525 IGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLS 584
+ +++PY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL+
Sbjct: 318 MAVVSPYNLQVDLLR--QSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLA 375
Query: 585 DRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+ RR+NVAVTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 376 EDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 428
>gi|220919450|ref|YP_002494754.1| superfamily I DNA and RNA helicase [Anaeromyxobacter dehalogenans
2CP-1]
gi|219957304|gb|ACL67688.1| superfamily I DNA and RNA helicase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 622
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 216/544 (39%), Positives = 313/544 (57%), Gaps = 30/544 (5%)
Query: 107 PALGQGVVYRLKDSSITVAFDDIPEEGLN----------SPLRLEKLANEVTYRRMKDAL 156
P QGVV R +++ VAFD+ P + + SP+ E+L+ RR++D
Sbjct: 91 PDAPQGVVARRTRTAVAVAFDEPPPDWVTDGRVVLELEPSPVTWERLSG--GLRRLRDDR 148
Query: 157 IQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFM 216
P +G P + VL+ + L+ Q+ A+ A ++++ +
Sbjct: 149 AGKRWHAVLAPGSGAPPRFLRAPRGPVLE---------ARLNPEQQAALDLADRAEDLAL 199
Query: 217 LHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARL 276
+HGPPGTGKTT +VE+I + RG +LA A SN+AVDN+VERL + VR+GHPAR+
Sbjct: 200 VHGPPGTGKTTVLVEVIRRAAARGESVLAAAPSNLAVDNLVERLAAAGLACVRVGHPARV 259
Query: 277 LPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDK------NTRREIQKELRT 330
LP +LE L+A+V + + +A + + AL K + K + RE ++E R
Sbjct: 260 LPGLLEHTLEARVEAHEAARIAQGLVDQALALRRDARKRRQKRGPGRFSASREQEREARA 319
Query: 331 LSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIAL 390
L E R+ + A +V++ A VVL TLT + L F L ++DEA QA+E A ++AL
Sbjct: 320 LLAEARRLEARAEAEVLERAQVVLATLTSLDAPALAGRRFALAVVDEATQAVEPAAYLAL 379
Query: 391 LKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIM 450
L+ R +LAGDHLQLPPTV S A+ GLG +LFERL + +GD ML Q+RM+ IM
Sbjct: 380 LRADRAVLAGDHLQLPPTVLSAAAQAGGLGVSLFERLVEAHGDRARVMLAEQHRMNARIM 439
Query: 451 NWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAM 509
+ S+ LY ++AHP+ R P L L+D +G EE+ E DS N GEAE+A
Sbjct: 440 AFPSEALYGGALRAHPAAAGRAIDDAP-LELVDTSGRGFEEETPEGSDSKQNTGEAELAA 498
Query: 510 AHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIII 569
A +RL+ +G+ +D+ +I+PY QV L+ L + D+ +EV TVDGFQGREKEA+++
Sbjct: 499 AEVRRLLAAGLAPADVAVISPYDGQVQRLRQLLA-DEVEAGLEVDTVDGFQGREKEAVVV 557
Query: 570 SMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYL 629
S+VRSN EVGFL+D RRMNVA+TRAR + +V D TVS F + +E+ E +
Sbjct: 558 SLVRSNEAGEVGFLADVRRMNVALTRARAKLVVVGDGSTVSRHPFYRSFLEHAERAGAWR 617
Query: 630 SGSE 633
S E
Sbjct: 618 SAWE 621
>gi|296425104|ref|XP_002842083.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638341|emb|CAZ86274.1| unnamed protein product [Tuber melanosporum]
Length = 711
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 254/675 (37%), Positives = 366/675 (54%), Gaps = 81/675 (12%)
Query: 25 LIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQST----K 80
L+ E++A+I+ A+ + G + NL + +TG G+T+++ + +
Sbjct: 13 LLQAERDADITLQTALLATLPPIALLRHGFALTNLLPISQRTGFGGRTIIDLEPDPAIFR 72
Query: 81 GDVLPAHKFGTHDVVVL---------KPNKADLGSPALGQGVVYRLKDSSITVAF----D 127
+LP H D+V + K K D+ + + +GVV+R+ + + VA D
Sbjct: 73 TGLLPPHGIRQGDIVRVEAQPGGSASKKEKTDVKAVGV-EGVVHRVFEGRLAVAVEAAGD 131
Query: 128 DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKD 187
++ L + K+ANE+T++RM+ A+ L + G GL VL G + + +
Sbjct: 132 EVDRVWTGKRLWVVKVANEITFKRMEKAMGFLKAMGEKGDIIGLADVLSGRRAAREVGEG 191
Query: 188 ---IAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQ--------- 235
+ F+ L+ SQK A+ AL+S+ V ++ GPPGTGKT T++EIILQ
Sbjct: 192 YEKMEVNWFDEGLNDSQKQAVRFALASEEVALILGPPGTGKTQTLLEIILQLATPPKTSS 251
Query: 236 -EVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDN 294
KIL C SNI+VDNIV RL P + ++R+GHPARLLP+V+E +LD +
Sbjct: 252 SSPPSPKKILVCGPSNISVDNIVLRL-PSSLPVIRMGHPARLLPKVIERSLDNLTRTSEQ 310
Query: 295 SSLASDIRKEMKALNGKLL---KTKDKN-TRREIQKELRTLSKEERKRQQLAVTDVIKNA 350
+ +D+R EM L KL KT+ K R+E + +R L E R+R++ VT++++ +
Sbjct: 311 GEIITDVRNEMDDLLSKLKSTGKTRMKGRARKEGWETVRHLRGEYREREKKCVTEIVRWS 370
Query: 351 DVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRC-----ILAGDHLQL 405
+VVL TL GA S++L + FD+VIIDE +QALE CWI LL ++ ILAGD +QL
Sbjct: 371 EVVLATLHGAGSKQLWSEKFDVVIIDEGSQALEAQCWIPLLLTNKSGIQKLILAGDPMQL 430
Query: 406 PPTV--QSVEAEKK----------GLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWS 453
PPT+ Q+ A K L TLF RL ++G + +LT QYRMH IM++
Sbjct: 431 PPTIKSQTTGAIPKTPKTKTEIPDSLEITLFSRLLAIHGGGIKCLLTTQYRMHATIMHFP 490
Query: 454 SKQLYNSKIKAHPS------------GVKRTSSTEPTLLLIDIAGCDMEE---------K 492
S++LYN + A PS V +T T LL ID G E K
Sbjct: 491 SQELYNGSLIAAPSVAERLLCTSLPYPVTKTEDTSIPLLFIDTQGGLFPEDSSPPTPSTK 550
Query: 493 KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL-KILRSKDDKLKNM 551
+S N EA + AH LI +GV DIG++TPY+AQV L+ K+LR +
Sbjct: 551 SPASESKSNTLEARLVAAHTHALIAAGVRPEDIGVLTPYSAQVSLITKLLRGT---YPAV 607
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
EV+TVD FQGREKEA++ S+VRSN K EVGFL D+RR+NVAVTR R C+V D ETV
Sbjct: 608 EVNTVDSFQGREKEAVVFSLVRSNDKGEVGFLKDKRRVNVAVTRPRCHLCVVGDAETVGQ 667
Query: 612 DG---FLKRLIEYFE 623
G FL R I + E
Sbjct: 668 GGKGTFLGRWIGWLE 682
>gi|448511934|ref|XP_003866635.1| Hcs1 protein [Candida orthopsilosis Co 90-125]
gi|380350973|emb|CCG21196.1| Hcs1 protein [Candida orthopsilosis Co 90-125]
Length = 669
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 243/622 (39%), Positives = 359/622 (57%), Gaps = 58/622 (9%)
Query: 53 GSTILNLKCVDAQTGLMGKTLLEFQ----STKGDVLPAHKFGTHDVV-VLKPNKADLGSP 107
G ++NL + +TG+ GKT+LE Q + GD L + T D+V + K KA
Sbjct: 38 GLAVINLNISNMRTGIGGKTILELQLDNAISNGD-LSSASMKTGDIVRIDKMTKAKKKDE 96
Query: 108 ALG------QGVVYRLKDSSITVAFDDIP--EEGLN--------SPLRLEKLANEVTYRR 151
+ VV ++ + +ITV+ D+ ++ LN + + + KL+N +TY+R
Sbjct: 97 ESKEKDESIEAVVVKVSNLTITVSVDESAGDDKVLNYYNNTNDSTRIWIVKLSNAITYKR 156
Query: 152 M---KDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKA 208
M + +++L + +N + +L GE K T+ + + FN L+ SQK AI A
Sbjct: 157 MITTMNKVLELKESEKND----IHKLLLGETKYTLSNGNSSIDFFNRGLNRSQKSAIDFA 212
Query: 209 LSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRV--R 266
++ N+ ++ GPPGTGKT T+VE+I Q RG K+L C SNI+VD I+ERL H
Sbjct: 213 INKSNISIIFGPPGTGKTMTLVELIRQLTTRGEKVLVCGPSNISVDTILERLGEHYKAGE 272
Query: 267 LVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQK 326
LVR+GHPARLLP ++ +L+ + + + D+ +++++ GK+ K K R+ + +
Sbjct: 273 LVRIGHPARLLPVNVQHSLEV-LSKSYGRDVIKDLENDIQSVLGKIKKCKRYVERKTLYQ 331
Query: 327 ELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNT--SFDLVIIDEAAQALEI 384
EL++L KE +R++ V +++ A VVL TL GA S L + +FD +IIDE +Q+LE
Sbjct: 332 ELKSLKKELVQRERKIVHELLNQAKVVLATLHGAGSYDLKRSGANFDSIIIDEVSQSLEP 391
Query: 385 ACWIALL---KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD-LYGDEVTSMLT 440
CWI LL K R ++AGD++QLPPT+ S A L TLF+RL + L GD+ +L
Sbjct: 392 QCWIPLLHNDKFKRLVIAGDNMQLPPTIMSGTATL--LETTLFDRLVNKLEGDKFKKLLN 449
Query: 441 VQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDME 490
VQYRM++ IM + S QLY K+ S GV R T + D G D
Sbjct: 450 VQYRMNDSIMKFPSMQLYEDKLIGDESVKEIKLTDLPGVSRNDETNVQCVWYDTQGGDFP 509
Query: 491 EKKDEE---DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDK 547
E+K E DS NE E ++ H K+LI+SGV DIGII PYAAQV LLK D
Sbjct: 510 EQKLESIKGDSKYNEMELQIVRGHVKKLIESGVPPQDIGIIAPYAAQVQLLKKQLGPDSL 569
Query: 548 LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTE 607
+ EVSTVDGFQGREKE II+++VRSN +++VGFLS+ RR+NVA+TR +RQ C++ D +
Sbjct: 570 I---EVSTVDGFQGREKEVIILTLVRSNDERDVGFLSEERRLNVAITRPKRQLCVIGDLQ 626
Query: 608 TVSSDG--FLKRLIEYFEEHAE 627
++ G FL+ +Y E+ E
Sbjct: 627 LMNDSGHKFLQSWSKYVEDGFE 648
>gi|240282138|gb|EER45641.1| insulin II gene enhancer-binding protein rip1 [Ajellomyces
capsulatus H143]
Length = 734
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 252/743 (33%), Positives = 376/743 (50%), Gaps = 129/743 (17%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLD--------TAQKKGSTILNLKCV 62
+ + +Q F L+ E EAEI++S S + D T Q G ++ L +
Sbjct: 3 TPIPIQAFAQAQTELLLAEHEAEIASSPLSASIAQSDGISASTRRTLQAAGYALIGLVLI 62
Query: 63 DAQTGLMGKTLLEF----------------------QSTKGDVLPAHKFGTHDVVVLK-- 98
+ +TG+ G+ + EF L AH DVV ++
Sbjct: 63 NCRTGMGGREVGEFGVDSAIGFGARGGKDSNGDGGNGDGGAQRLGAHGMRVGDVVRVEDV 122
Query: 99 ------------PNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANE 146
+K + +GVV R+ + SI VAF G R E+ +
Sbjct: 123 AAGTRGGGGRARGSKEEERKEKALEGVVTRVGERSIWVAFGGQRVAGGKG--RNEESVED 180
Query: 147 VTYRR---MKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK-KDIAFKPF-NSNLDHSQ 201
+ ++ MK + +L ++ + V+FG P+ + I F + L+ SQ
Sbjct: 181 LWGKKVWMMKQTMAKLGSMTESD-YTYFMRVVFGHSTPSPVDLSSIGTIEFIDPTLNDSQ 239
Query: 202 KDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLV 261
++AI AL++K + ++HGPPGTGKT T++E+ILQ +++ +IL C SN++VDNIVERL
Sbjct: 240 REAIRFALAAKEIALIHGPPGTGKTYTLIELILQFLRQNLRILVCGPSNVSVDNIVERLA 299
Query: 262 PHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTR 321
PH+V LVR+GHPARLL VL+ +L+ + D +++ DIRKE++ + KT+ R
Sbjct: 300 PHKVPLVRIGHPARLLSTVLDHSLEVLIQTSDAAAIVKDIRKEIEVKQASIRKTRSGRER 359
Query: 322 REIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQA 381
REI ++L+ L KE R+R+ V +++ + VVL TL GA +L N FD+VIIDEA+QA
Sbjct: 360 REIYRDLKELRKEFRERESKCVGNLVTDCKVVLATLHGAGGHQLRNQKFDVVIIDEASQA 419
Query: 382 LEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKG----------------------- 418
LE CW+ LL S+ ILAGDHLQLPPTV+S + G
Sbjct: 420 LEAQCWVPLLSASKAILAGDHLQLPPTVKSATLKFSGAVGNGKSPDDEQSVLRMDKDNNV 479
Query: 419 ---------LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH---- 465
L TLF+RL L+G + MLT QYRMHE IM + S++LY SK+ A
Sbjct: 480 GQHKAKGGTLEMTLFDRLLSLHGPAIKRMLTTQYRMHEKIMQFPSQELYESKLIAADAVK 539
Query: 466 -------PSGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMA--HAKRLI 516
P V+ T T L G D EK EE + M + EA++ + H + LI
Sbjct: 540 LRLLKDLPYEVEETDDTREPL------GGDFPEKV-EEPAVMPKAEADIPLCREHVENLI 592
Query: 517 QSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNS 576
+GV D+ ++TPY AQ+ LL + DK +E+ +VDGFQGREKEA+I+S+VRSN
Sbjct: 593 GAGVKPEDVAVVTPYNAQLALLSSMLK--DKYPGLELESVDGFQGREKEAVIVSLVRSNP 650
Query: 577 KKEVGFLSDRRRMNVAVTRA--------RRQCCLVCDTETVSSDG-------------FL 615
+ EVGFL+++RR+N +V + L + V + G FL
Sbjct: 651 EHEVGFLAEKRRLNASVMKVSISSHQDIEPSVLLATYVDIVLTHGLSFSGPLINSGNQFL 710
Query: 616 KRLIEYFEEHAE--YLSGSEYLN 636
+R +++ EE+A+ Y EY+
Sbjct: 711 RRWMDFLEENADLRYPDAGEYMQ 733
>gi|168705200|ref|ZP_02737477.1| DNA-binding protein SMUBP-2 [Gemmata obscuriglobus UQM 2246]
Length = 766
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 245/680 (36%), Positives = 368/680 (54%), Gaps = 84/680 (12%)
Query: 19 VSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF-Q 77
+S ++ L+DLE +AE + + + GST+ L D++ GL G+ LL F +
Sbjct: 85 LSNLSHLLDLEAKAEQEEARRRAQAEE-GSPVGDGSTLTKLVLRDSEFGLGGRLLLTFGR 143
Query: 78 STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSP 137
T + LP + G V+L + P+ +GV+Y ++I VA D ++ +
Sbjct: 144 KTLNEPLPPSRLGPGAPVLLSQTNVNRRVPSY-RGVIYDRDTATIGVAIDPPDDDLPDEA 202
Query: 138 L-RLEKLANEVTYRRMKDAL----------------------------IQLSKGVQNGP- 167
+ RL+ +EV+ R +DAL + KG + GP
Sbjct: 203 VWRLDLSPDEVSRLRQQDALRRAASATGDRLAQLREVLLGERPTPPAPLPKGKGEEGGPL 262
Query: 168 -------------AAGL-----------IPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKD 203
G+ P + G P L+ + S L+ Q+D
Sbjct: 263 PEGSEDNPPPSPLPEGMGSEDEPPTTSDTPSVSGASSPPSLQGGAGGR-SPSTLNEPQRD 321
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A++ AL++ + ++HGPPGTGKTTTVVE I + V RG K+LACA SN AVDN++E+L+
Sbjct: 322 AVAFALAAPDFAIIHGPPGTGKTTTVVEFIRKLVARGDKVLACAPSNHAVDNLLEKLLGV 381
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
VRLGHPAR++P++ A+D + ++ A + +E AL + DK TR +
Sbjct: 382 GELPVRLGHPARVMPELRARAIDILAEKHPDARQARKVAREAFAL----FRQADKWTREK 437
Query: 324 IQ--------KELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVII 375
Q KE R + E R+ + A V+ A VV TLTG S+ L FD+V+I
Sbjct: 438 PQPGEKAALRKEAREMLTEVRRLEASATERVLDEARVVCATLTGLDSQLLGQRRFDVVVI 497
Query: 376 DEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEV 435
DEA Q+ E A W+ LL+ ++ +LAGDH QLPPTV S EA ++GL +L ERL +G
Sbjct: 498 DEACQSTEPAAWVPLLRANKVVLAGDHCQLPPTVLSPEAAERGLSVSLMERLVRQFGPGA 557
Query: 436 TSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIA 485
+ +LTVQ+RMH +M +S+ + Y+S++ AH S GV R TE + ID A
Sbjct: 558 SRLLTVQHRMHAAVMGFSNGEFYDSQLVAHESVAAHLLCHLPGVARDPLTETPVQFIDTA 617
Query: 486 GCDMEEKKDEE-DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSK 544
G +E+ +E+ S N EA +A+ + L+ G+ S IG+ITPY AQV ++LR K
Sbjct: 618 GASYDEELEEDTGSRFNAQEATLAVKKVRALLALGIAPSQIGLITPYRAQV---RLLREK 674
Query: 545 DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
+ +E+ +VDGFQGREKEAI++S+VRSN++ E+GFLSD RR NVA TRARR+ ++
Sbjct: 675 LADVPGLEIDSVDGFQGREKEAIVVSLVRSNNEGEIGFLSDTRRTNVAFTRARRKLLVIG 734
Query: 605 DTETVSSDGFLKRLIEYFEE 624
D+ T++SD F +R++ YFE+
Sbjct: 735 DSATLASDPFYQRMLTYFEQ 754
>gi|197124729|ref|YP_002136680.1| superfamily I DNA and RNA helicase [Anaeromyxobacter sp. K]
gi|196174578|gb|ACG75551.1| superfamily I DNA and RNA helicase [Anaeromyxobacter sp. K]
Length = 622
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 226/602 (37%), Positives = 337/602 (55%), Gaps = 36/602 (5%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPA- 108
+ +G I +++ D + L G+ L+ F + + G +V L + +PA
Sbjct: 38 EARGLAIADVEAQD-EGALAGRALVTFGRGGRPLP-GGRIGAGSLVSLAQRR---DTPAD 92
Query: 109 LGQGVVYRLKDSSITVAFDDIPEEGLN----------SPLRLEKLANEVTYRRMKDALIQ 158
QGVV R +++ VAFD+ P + + SP+ E+L+ RR++D
Sbjct: 93 APQGVVARRTRTAVAVAFDEPPPDWVTDGRVVLELEPSPVTWERLSG--GLRRLRDDRAG 150
Query: 159 LSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLH 218
P +G P + VL+ + L+ Q+ A+ A ++++ ++H
Sbjct: 151 KRWHAVLAPGSGAPPRFLRAPRGPVLE---------ARLNPEQQAALDLADRAEDLALVH 201
Query: 219 GPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLP 278
GPPGTGKTT +VE+I + RG +LA A SN+AVDN+VERL + VR+GHPAR+LP
Sbjct: 202 GPPGTGKTTVLVEVIRRAAARGESVLAAAPSNLAVDNLVERLAAAGLACVRVGHPARVLP 261
Query: 279 QVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDK------NTRREIQKELRTLS 332
+LE L+A+V + + +A + + AL K + K + RE ++E R L
Sbjct: 262 GLLEHTLEARVEAHEAARIAQGLVDQALALRRDARKRRQKRGPGRFSASREQEREARALL 321
Query: 333 KEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLK 392
E R+ + A +V++ A VVL TLT L F L ++DEA QA+E A ++ALL+
Sbjct: 322 AEARRLEARAEAEVLERAQVVLATLTSLDGPALAGRRFALAVLDEATQAVEPAAYLALLR 381
Query: 393 GSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNW 452
R +LAGDHLQLPPTV S A++ GLG +LFERL + +GD ML Q+RM+ IM +
Sbjct: 382 ADRAVLAGDHLQLPPTVLSAAAQEGGLGVSLFERLVEAHGDRARVMLAEQHRMNARIMAF 441
Query: 453 SSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAH 511
S+ LY ++AHP+ R P L+D +G EE+ E DS N GEAE+A A
Sbjct: 442 PSEALYGGALRAHPAAAGRAIDDAP-FELVDTSGRGFEEETPEGSDSKQNTGEAELAAAE 500
Query: 512 AKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISM 571
+RL+ +G+ D+ +I+PY AQV L+ L +++ + +EV TVDGFQGREKEA+++S+
Sbjct: 501 VRRLLAAGLAPGDVAVISPYDAQVQRLRQLLAEEVE-AGLEVDTVDGFQGREKEAVVVSL 559
Query: 572 VRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
VRSN EVGFL+D RRMNVA+TRAR + +V D TVS F + +E+ E + S
Sbjct: 560 VRSNEAGEVGFLADVRRMNVALTRARAKLVVVGDGSTVSRHPFYRSFLEHAERAGAWRSA 619
Query: 632 SE 633
E
Sbjct: 620 WE 621
>gi|170095291|ref|XP_001878866.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646170|gb|EDR10416.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 721
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 246/713 (34%), Positives = 365/713 (51%), Gaps = 105/713 (14%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
L F++ L+ E++AE+ S ++ ++KG ++ L GL GKTL+
Sbjct: 7 LTAFIARQRTLLAKERDAEVERSSLLLSNCGPKLLEQKGLSLGGLGVSSINIGLGGKTLV 66
Query: 75 EFQSTKG----DVLPAHKFGTHDVVVL--------------KPNKADLGSPALGQGVVYR 116
E + + P H D+ + KP D S + +GVVY+
Sbjct: 67 ELERPSAYHSSPLFPPHTIRPGDLARIEANVSSGGATKKAKKPTSTDTKSTQV-EGVVYK 125
Query: 117 LKDSSITVAFD--DIPEEGLNSP--LRLEKLANEVTYRRMKDALIQLSKGVQNGPAAG-- 170
+ D+ I +A + D E L+ P R+ KLAN VTY RM A+ + K V G
Sbjct: 126 VSDTRIVIAVEPSDSASEDLDLPERCRVVKLANSVTYDRMDKAIDHIEKTVIPSVCRGDA 185
Query: 171 -------LIPVLFGEQKPT--VLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPP 221
LI VL G P+ + +I F F+ +L+ SQK+A+ L S V +HGPP
Sbjct: 186 SKAAVNPLIQVLLGITPPSRRIPLDNIVF--FDEHLNESQKEAVKFCLESPEVACIHGPP 243
Query: 222 GTGKTTTVVEIILQEV------KRGSKILACAASNIAVDNIVERLVP-------HRVRLV 268
GTGKT T++EII Q + ++L C ASN++VDNI+ERL+ +V++
Sbjct: 244 GTGKTHTLIEIIRQLTAESPTNPKPKRLLVCGASNLSVDNILERLLALPADGKSEKVKVT 303
Query: 269 RLGHPARLLPQ--VLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNT------ 320
R+GHPAR++ ++ES L+ + R + ++LA D++ E++ G L
Sbjct: 304 RIGHPARVMTHEGIIESTLEVKATRTEQAALAKDVKNELETALGVLSGKGKSVKGKGPRG 363
Query: 321 --RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEA 378
R+++ +E++ L KE R+R+ V V+ + +VL T + R+L FD+VIIDEA
Sbjct: 364 AERKKMWEEVKALRKEYRQREGGVVKSVLGESQIVLATCHSSGGRQLRYHDFDVVIIDEA 423
Query: 379 AQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA-----------------------E 415
QALE CWI + K + ILAGD +QLPPT+ S+
Sbjct: 424 TQALEAVCWIPIFKAKKLILAGDPMQLPPTILSIGNNKKAKAKAGKSASIATNKRIELMP 483
Query: 416 KKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST 475
+ L TLF+RL +YG + ML VQYRMH I + SK LY SK+++H S R
Sbjct: 484 PRTLETTLFDRLEKMYGPSIKRMLKVQYRMHAQICAFPSKTLYGSKLQSHSSVAARLLQD 543
Query: 476 EPT----------------LLLIDIAGCDMEEKKD---EEDSTMNEGEAEVAMAHAKRLI 516
P ++ D AGC+ E+ D +E S NE E + ++L+
Sbjct: 544 LPNTHADSEEDVKDMLQTPVVFFDTAGCEYFERLDGDGDEGSRCNENEVTIVKNWVEKLV 603
Query: 517 QSGVHASDIGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSN 575
+ G+ I IITPY AQV LL LR ++E+ TVDG QGREKE IIIS+VRSN
Sbjct: 604 EVGIQPKQIAIITPYQAQVTLLTSTLRPTYG--PDLEIGTVDGMQGREKEVIIISLVRSN 661
Query: 576 SKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE 627
+EVGFL ++RRMNVA+TRA+R C+V D+ TV G +LK+ + + + +A+
Sbjct: 662 DTREVGFLKEKRRMNVAMTRAKRHLCIVGDSSTVCHGGSYLKKWLAWLDTNAD 714
>gi|397615124|gb|EJK63238.1| hypothetical protein THAOC_16125 [Thalassiosira oceanica]
Length = 1008
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 248/711 (34%), Positives = 371/711 (52%), Gaps = 123/711 (17%)
Query: 42 ASRNLDTAQKKGSTIL-NLKCVDAQTGLMGKTLLEF--------QSTKG----------D 82
AS++ D G L N+ D GL G+T++ F QS G
Sbjct: 28 ASKSKDDNDDTGGFFLRNVDIADTSVGLYGRTVVTFAAVDSSSVQSEDGGSASKRGSAQS 87
Query: 83 VLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF---------------- 126
+LPAH+ D V + PN S GV+ + D SI+VA
Sbjct: 88 LLPAHRLTVGDEVDVLPNNGKTKSSKRSSGVISGVTDCSISVALGVDSKSQRKQPANSER 147
Query: 127 --------------DDIPEEGL---NSPLRLEKLANEVTYRRMKDALIQLSKGVQN--GP 167
D+I + + P L +N +R+M AL+QL K + P
Sbjct: 148 SNAKRKGRGSSTGDDEIDDHEMALGGGPYCLVPASNVEVHRKMVSALVQLEKSASDDRSP 207
Query: 168 AAGLIPVLFGEQKPTVLKKDIA---FKPFN-------SNLDHSQKDAISKALSSKN-VFM 216
A +I F P + D++ + F + LD+SQ++A+ AL S + + +
Sbjct: 208 AIDIIRAAFQSNDPK-FRTDLSRTGIEEFERECGLSETRLDYSQREAVITALYSNSPINL 266
Query: 217 LHGPPGTGKTTTVVEIILQEV-KRGSKILACAASNIAVDNIVERLV-------PHR---- 264
+ GPPGTGKT TV +I V K+G K+L A SN+AVDN++ERL+ P
Sbjct: 267 ILGPPGTGKTITVAHLIQAAVHKKGWKVLVTAPSNVAVDNVLERLMRLEGCSGPDHGKRK 326
Query: 265 ---------VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
++ VRLGHPAR+ + +L+++V + + + D R E+K L
Sbjct: 327 GKKKGNGRNIKAVRLGHPARIQQGIQGYSLESRVQSAEGTEIVKDCRCELKQYIKTLSDA 386
Query: 316 KDK-NTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS---RKLDNTS-- 369
K + +R +E+++L KE R+R++ V +++ ++VV T GA S +++ ++
Sbjct: 387 KSRPGEKRTAYREMKSLRKEIRQREEKVVGQILRESNVVFATNVGAASSLFKRMVGSNGE 446
Query: 370 ---FDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAE-KKGLGRTLFE 425
FDLV+IDEA QALE +CWI+LLKG+R +LAGDH QLPPTV+S E ++GL RTLFE
Sbjct: 447 PIVFDLVVIDEAGQALEASCWISLLKGNRAVLAGDHKQLPPTVKSSVPEVQRGLSRTLFE 506
Query: 426 RLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS------------------ 467
RL Y E + + Y M + +W+S+ +Y+ ++ +H S
Sbjct: 507 RLMMAY--ESNDLRSCGYSMLKVQSDWASEAMYSGQLVSHESVRDRKLSDLPQIVNGKDH 564
Query: 468 GVKRTSST--EPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDI 525
RT ST TLLL+D GCDM E ++ S NEGEA + ++H L+ G+ A D+
Sbjct: 565 DADRTDSTLHSTTLLLVDTTGCDMHEMENSAGSRKNEGEAAIVVSHVNMLLALGLRAEDM 624
Query: 526 GIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKE--VGFL 583
IITPY QV LL+ L ++ N+E+ +VDGFQG E+EA+++S+VRS+ + +GFL
Sbjct: 625 AIITPYNGQVELLRNLLLP--QVPNLEIRSVDGFQGGEREAVVLSLVRSSDRGRDGIGFL 682
Query: 584 SDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
SD RR+NVAVTRARR C ++CD ETVS + F+K L ++ E+ EY S +EY
Sbjct: 683 SDARRLNVAVTRARRHCAVICDVETVSRNKFIKGLTDWMEDKGEYRSAAEY 733
>gi|444911444|ref|ZP_21231619.1| Superfamily I DNA/RNA helicase [Cystobacter fuscus DSM 2262]
gi|444718202|gb|ELW59018.1| Superfamily I DNA/RNA helicase [Cystobacter fuscus DSM 2262]
Length = 640
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 232/641 (36%), Positives = 362/641 (56%), Gaps = 38/641 (5%)
Query: 18 FVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQ 77
F + L+ +E++AE + + +L ++G T L+L+ ++ + GL G+ L+
Sbjct: 7 FFDSLGRLLSMERDAERARTAALAEGMSLQQRAEQGLTFLDLESLEEEVGLGGRVLVTLA 66
Query: 78 STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIP----EEG 133
PA + D V + P +A++ PA + +V R + + +AFD P EG
Sbjct: 67 RQDRARFPA-RLDNGDQVAVFPRRAEVKEPA--RALVTRATATRVQLAFDRSPPPFIHEG 123
Query: 134 LNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV--LKKDIAFK 191
L LRL+++ N+VTY RM+ L ++ K + G VL G + P L++ +
Sbjct: 124 L---LRLDRVPNDVTYERMRAGLSRV-KALDKGLGRRKREVLLGNEPPRFDSLREFTPSR 179
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNI 251
P N Q DA+++AL++++ F++HGPPGTGK+T + E+ Q V +G ++L AASN
Sbjct: 180 PLNPE----QHDAVARALAAEDFFLVHGPPGTGKSTVLAEVAAQAVAQGQRLLCAAASNA 235
Query: 252 AVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGK 311
AVD++++ + +R VR+GHPAR+ P++ E LD V + L+ ++ E +L G
Sbjct: 236 AVDHLLDLCLDKGLRAVRVGHPARVTPRLQEHTLDLIVEDHPDRVLSRELFDEAFSLLGY 295
Query: 312 LLKTKDKNTRRE-------IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRK 364
+ + + RE E + + E R ++ AV +V++ A VV TL S
Sbjct: 296 ARRQRTQGRSRERFSNARASTTEAKGMLDEARALERKAVRNVLERAQVVCVTLASLDSGV 355
Query: 365 LDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLF 424
L + FDL ++DEAAQ+ E + L+ + +LAGD QLPPT+ S EA K GL +LF
Sbjct: 356 LAHEEFDLALLDEAAQSTEPLALLGFLRAPKVVLAGDPQQLPPTILSPEAAKAGLAVSLF 415
Query: 425 ERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT---------SST 475
ERL +GD V ML QYRM+ IM + SK++Y +++AHPS RT
Sbjct: 416 ERLLADHGDGVKRMLREQYRMNTAIMTFPSKEMYGGELRAHPSVAGRTLADVLPPEAQGD 475
Query: 476 EPTLLLIDIAGCDMEEKKDEE-DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ 534
P +L +D AG EE+++++ S N GEA++ +A K L+ +G+ ++ +ITPY AQ
Sbjct: 476 FPPVLYLDTAGKGFEEEQEKDTGSLFNTGEADLIVARVKELLAAGIAPRELAVITPYRAQ 535
Query: 535 VVLLKILRSKDDKLK-NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAV 593
LR + + L ++EV TVD FQGREK+AI++S+VRSNS+ ++GFLSD RRMNVA+
Sbjct: 536 A---HALRERVEPLSPDVEVDTVDAFQGREKDAILVSLVRSNSEGQIGFLSDLRRMNVAL 592
Query: 594 TRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
TRARR +V D+ T+S F R IE +E A Y S E+
Sbjct: 593 TRARRHLFVVGDSATLSGHAFYARFIESTQEGAGYRSAWEW 633
>gi|417303798|ref|ZP_12090840.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica WH47]
gi|327539896|gb|EGF26498.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica WH47]
Length = 735
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 247/671 (36%), Positives = 358/671 (53%), Gaps = 68/671 (10%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLE 75
+++ +A +DLE EAE + R+ + G I+ L VD TGL G+ LL+
Sbjct: 70 EDYFEQLAIWLDLEAEAERARLAKLRQIRSQRDVESTGQAIVGLDMVDYHTGLAGRYLLD 129
Query: 76 FQSTKGDVLPAH--KFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEG 133
G LP + K G+ V+ + + +D G GVV R K+ SI +A D P
Sbjct: 130 LAKPGGKDLPMNRLKVGSPVVLSMDDDPSDEGI----AGVVSRRKNHSIQIATDTFPIRD 185
Query: 134 ----------------------LNSPLRLEKLANEVTYRRMKDALIQLSKGVQ-NGPAAG 170
++ RL+ +E T R L ++K + G +
Sbjct: 186 QDDLKKKKGVGKHGKSGQRPAVVSDRFRLDMSPDETTRLRQ---LAAMAKAQEIRGRSGK 242
Query: 171 LIPVLFGEQKPTVLKKDI--------AFK------PFNSNLDHSQKDAISKALSSKNVFM 216
L VL G + P V I +F+ F + L+ Q+DA++ A+ + +V +
Sbjct: 243 LRDVLLGIKTPRVDGNPIDTHDIDPESFQFELKDIDFRTELNPPQRDAVAFAMMADDVAI 302
Query: 217 LHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARL 276
+HGPPGTGKTTT+ EII Q V+RG ++LACAASN AVDN++ERLV ++R+GHPAR+
Sbjct: 303 IHGPPGTGKTTTIAEIIAQSVERGERVLACAASNTAVDNLLERLVRLMPNVIRVGHPARV 362
Query: 277 LPQVLESALDAQVLRGDNSSLASDIRKEMKAL----NGKLLK--TKDKNTRREIQKELRT 330
+ E LDA V S++ D+R+E+ + N + + +++ R E+ E
Sbjct: 363 FESLQEHTLDALVESDPTSTVIKDLRRELDQILREANRPIREGGGRERKQRAELFNEAGR 422
Query: 331 LSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIAL 390
L R +++ V VI ADV+ TT T L + SFDLV++DE+ Q E W A+
Sbjct: 423 LRGMIRSQERSIVRAVIDRADVICTTTT-IDEELLSDQSFDLVVVDESCQCTEPGMWQAI 481
Query: 391 LKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIM 450
L+ R ILAGDH QLPPTV S +A + G+ +L +RL YG+++ LTVQYRM+E IM
Sbjct: 482 LRADRLILAGDHCQLPPTVLSDDAARIGMRDSLMQRLVHRYGEKIYRRLTVQYRMNESIM 541
Query: 451 NWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEE-DST 499
+SS Y+ + A S V+ T LLLID AG EE+ + + S
Sbjct: 542 RFSSDHFYDGTLIADASVKRHLLCDLPNVEENDFTSEPLLLIDTAGAGYEEELEPDGQSK 601
Query: 500 MNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGF 559
+N GEA+V + K+L GV I +I PYAAQV + LR + D L +E+ TVDGF
Sbjct: 602 LNHGEAKVILQLVKQLADMGVTGDQIAVIAPYAAQV---RNLRMRLD-LDGIEIDTVDGF 657
Query: 560 QGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLI 619
QGREKE ++I+M RSN E+GFLSD+RR NVA+TRA+R+ +V D+ T+ + F L
Sbjct: 658 QGREKEVVLITMTRSNPDGEIGFLSDQRRSNVALTRAKRKLIVVGDSATLCNHEFYSELF 717
Query: 620 EYFEEHAEYLS 630
YFE+ Y S
Sbjct: 718 SYFEDAGAYHS 728
>gi|86160632|ref|YP_467417.1| superfamily I DNA/RNA helicase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85777143|gb|ABC83980.1| Superfamily I DNA and RNA helicase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 619
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 217/535 (40%), Positives = 316/535 (59%), Gaps = 15/535 (2%)
Query: 107 PALGQGVVYRLKDSSITVAFDDIPEEGL-NSPLRLEKLANEVTYRRMKDALIQLSKGVQN 165
P QGVV R +++ VAFD+ P + + + + LE + VT+ R+ L +L +
Sbjct: 91 PDAPQGVVARRTRTTVAVAFDEPPPDWVTDGRVVLELEPSPVTWERLSGGLRRLR---DD 147
Query: 166 GPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGK 225
VL GE P + ++ L+ Q+ A+ A ++++ ++HGPPGTGK
Sbjct: 148 RAGKRWHAVLAGE--PARFLRAPRGPALDAPLNPEQQAALELADRAEDLALVHGPPGTGK 205
Query: 226 TTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESAL 285
TT +VE+I + RG +LA A SN+AVDN+VERL + VR+GHPAR+LP +LE L
Sbjct: 206 TTVLVEVIRRAAARGETVLAAAPSNLAVDNLVERLAAAGLACVRVGHPARVLPGLLEHTL 265
Query: 286 DAQVLRGDNSSLASDIRKEMKALNGKLLKTKDK------NTRREIQKELRTLSKEERKRQ 339
+A+V + + +A D+ + AL K + K + RE ++E R L E R+ +
Sbjct: 266 EARVEAHEAARIAQDLVDQALALRRDARKRRKKRGPGRFSASREQEREARALLAEARRLE 325
Query: 340 QLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILA 399
A +V++ A VVL TLT + L F L ++DEA QA+E A ++ALL+ R +LA
Sbjct: 326 ARAEAEVLERAQVVLATLTSLDAPALAGRRFALAVVDEATQAVEPAAYLALLRADRAVLA 385
Query: 400 GDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYN 459
GDHLQLPPTV S A+ GLG +LFERL + +GD ML Q+RM+ IM + S+ LY
Sbjct: 386 GDHLQLPPTVLSAAAQAGGLGVSLFERLVEAHGDRARVMLAEQHRMNARIMAFPSEALYG 445
Query: 460 SKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQS 518
++AHP+ R P L L+D +G EE+ E DS N GEAE+A + +RL+ +
Sbjct: 446 GALRAHPAAAGRAIDDAP-LELVDTSGRGFEEETPEGSDSKQNAGEAELAASEVRRLLAA 504
Query: 519 GVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK 578
G+ +D+ +I+PY AQV L+ L + D+ +EV TVDGFQGREKEA+++S+VRSN
Sbjct: 505 GLAPADVAVISPYDAQVQRLRQLLA-DELEAGLEVDTVDGFQGREKEAVVVSLVRSNEAG 563
Query: 579 EVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSE 633
EVGFL+D RRMNVA+TRAR + +V D TVS F + +E+ E + S E
Sbjct: 564 EVGFLADVRRMNVALTRARAKLVVVGDGSTVSRHPFYRSFLEHAERAGAWRSAWE 618
>gi|283779091|ref|YP_003369846.1| AAA ATPase [Pirellula staleyi DSM 6068]
gi|283437544|gb|ADB15986.1| AAA ATPase [Pirellula staleyi DSM 6068]
Length = 639
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 238/610 (39%), Positives = 346/610 (56%), Gaps = 34/610 (5%)
Query: 47 DTAQKKGSTILNLKCVDAQTGLMGKTLLEFQS-TKGDVLPAHKFGTHDVVVLKPNKADLG 105
D A G I +L D GL G+T+L + T LP H+ V+L K
Sbjct: 43 DQAIASGHAINDLVIADEFPGLAGRTILALRKRTMQMPLPPHRLQVGSPVILLDEK---- 98
Query: 106 SPAL--GQGVVYRLKDSSITVAFDDIPEEGLNSP-LRLEKLANEVTYRRMKDALIQLSKG 162
P + +GVV R + +A ++ PE ++P LRL+ ++EV+ R A+ + +
Sbjct: 99 QPQVRGARGVVSRRSAEQLEIAVNEPPEFESDAPKLRLQLFSDEVSRNRQLQAM-RTATT 157
Query: 163 VQNGPAAGLIPVLFGEQKPTV--LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGP 220
V++G L L GE P +K +A ++ LD SQ++ + ALS+++ +HGP
Sbjct: 158 VESGRIKQLRDSLLGETAPKFREVKNFVA----DAALDPSQQEGVKLALSAEDFACIHGP 213
Query: 221 PGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQV 280
PGTGKTTT+V +I Q V RG+K+LA A SN+AVD+++E+L VR++RLGHPAR+ +
Sbjct: 214 PGTGKTTTLVAVIRQLVARGAKVLATAPSNLAVDHLLEKLHLAGVRVLRLGHPARVQESL 273
Query: 281 LESALDAQVLRGDNSSLASDIRKE---MKALNGKLLKTKDK-NTRREIQKELRTLSKEER 336
LD QV + ++A + ++ +K K + K ++E++ E R L + R
Sbjct: 274 HHLVLDEQVENHPDVAVARKLVRDALRLKDRAAKFTRAKPPPGYKQELRAEARELFSDAR 333
Query: 337 KRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRC 396
+ + V ++ +ADVVL TLTG + L++ FD+ +IDEAAQA E ACW ALL+ R
Sbjct: 334 RIEAGVVRYLLDSADVVLATLTGIDATVLEDRRFDVAVIDEAAQATEPACWPALLRADRV 393
Query: 397 ILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQ 456
ILAGD QLPPT+ S EA + GL R+L ERL + ++ L VQYRMH+ IM +SS +
Sbjct: 394 ILAGDPFQLPPTIISPEAARGGLARSLMERLLETSTTTISHRLAVQYRMHQSIMAFSSAE 453
Query: 457 LYNSKIKAHP----------SGVKRTSSTEPTLLLIDIAGCDMEEKK-DEEDSTMNEGEA 505
Y + A P S V T T L ID AG +E+ ++S N EA
Sbjct: 454 FYEQGLTADPSVASHLLSDLSEVTPTDRTSTALEFIDTAGAGYDERAGSSQESRENPQEA 513
Query: 506 EVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKE 565
E+ + A L +GV A I II+PYAAQV LL+ R D L ++V T+DGFQGRE E
Sbjct: 514 ELVVKLALALRDAGVAAEAIAIISPYAAQVRLLR--RLLDGTL--IDVDTIDGFQGRESE 569
Query: 566 AIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEH 625
A+IIS+VRSN+ E+GFL+D RRMNVA+TRARR+ ++ D+ T+ F R++ + E
Sbjct: 570 AVIISLVRSNATGEIGFLADVRRMNVAITRARRKLIIIGDSATIGGHDFYARMLSWVERE 629
Query: 626 AEYLSGSEYL 635
Y + E L
Sbjct: 630 GIYRTVWEEL 639
>gi|336372693|gb|EGO01032.1| hypothetical protein SERLA73DRAFT_105557 [Serpula lacrymans var.
lacrymans S7.3]
Length = 743
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 259/739 (35%), Positives = 376/739 (50%), Gaps = 135/739 (18%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
L F+ L+ E++AEI S ++ ++KG + L V GL GKTL+
Sbjct: 7 LSAFIERHRVLLAKERDAEIERSSLLLSNCGPKLLEQKGLALGGLGVVGVNIGLGGKTLV 66
Query: 75 EFQSTKGD----VLPAHKF------------------------GTHDVVVLKPNKADLGS 106
E + + P H F T P+ A+ +
Sbjct: 67 ELERPAAYHSTVIFPPHTFRQGFMPGDLARIEENISLNGLAKKNTKGKKTAAPSSAESKN 126
Query: 107 PALGQGVVYRLKDSSITVAFD---------DIPEEGLNSPLRLEKLANEVTYRRMKDALI 157
+GVVY++ D+ I +A D ++PE R+ KLAN VTY RM L
Sbjct: 127 VQAAEGVVYKVSDTRIVIAVDSSENSSDMLELPER-----CRVLKLANSVTYDRMDKTLN 181
Query: 158 QLSKGV------QNGPA----AGLIPVLFG--EQKPTVLKKDIAFKPFNSNLDHSQKDAI 205
L K V N A + L VL G P + D+ F F+ +L+ SQK+A+
Sbjct: 182 TLEKAVIPSSRQANDKAQYELSQLTRVLLGITPPSPKLSVPDLQF--FDDSLNPSQKEAV 239
Query: 206 SKALSSKNVFMLHGPPGTGKTTTVVEIILQEV------KRGSKILACAASNIAVDNIVER 259
AL S V +HGPPGTGKT T++EII Q ++IL C ASN++VDNI+ER
Sbjct: 240 KFALESAEVACIHGPPGTGKTHTLIEIIRQLTTVTPANPNANRILICGASNLSVDNILER 299
Query: 260 LVP-------HRVRLVRLGHPARLLPQ--VLESALDAQVLRGDNSSLASDIRKEMKALNG 310
L+ ++ + R+GHPAR++ VLE+ L+ + R D ++LA D++ E++A
Sbjct: 300 LLALPAADKNAKLSVTRIGHPARVMAHEGVLEATLEVKAGRSDQAALAKDVKSELEAALD 359
Query: 311 KLLKTKDKNT--------RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS 362
L K R+++ ++++ L KE R+R+ V V+ ++ +VL T A
Sbjct: 360 VLSGKKKGAKGKAPRGLERKKMWEDVKALRKEYRQREGGVVKTVLGDSQIVLATCHSAGG 419
Query: 363 RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSV---------- 412
R+L N +FD+V+IDEA QALE CWI + K + ILAGD LQLPPT+ S+
Sbjct: 420 RQLHNHTFDVVLIDEATQALEAVCWIPIFKAKKLILAGDPLQLPPTILSLNKHEKKEKTA 479
Query: 413 -----EAEKKGLGR------------------TLFERLADLYGDEVTSMLTVQYRMHEHI 449
+ +K+G + TLF+RL +YG + ML VQYRMH I
Sbjct: 480 PIAKSQPQKQGQNKKSNSPKKSGLRPPRTLEVTLFDRLEKMYGPGIKRMLNVQYRMHAQI 539
Query: 450 MNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLL------IDIAGCDMEEKK 493
+ SK LY+S++K+H S G K S E LL D AGC+ E+
Sbjct: 540 CQFPSKTLYSSRLKSHESVASHLLHDLPGTKTDSEEEQKELLGTPVVFFDTAGCEYYERL 599
Query: 494 D---EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL-KILRSKDDKLK 549
+ ++ S NE E V ++L+ +G+ S I IITPY AQV LL +LR
Sbjct: 600 EGDGDDGSRCNENEGTVVKQWTRKLVDAGILPSQIAIITPYQAQVTLLTSLLRPTYG--S 657
Query: 550 NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
++E+ TVDG QGREKEA+IIS+VRSN K+EVGFL ++RR+NVA+TRARR C+V D+ TV
Sbjct: 658 DLEIGTVDGMQGREKEAVIISLVRSNEKREVGFLKEKRRLNVAMTRARRHLCVVGDSSTV 717
Query: 610 SSDG-FLKRLIEYFEEHAE 627
G +LK+ + + E +A+
Sbjct: 718 VHGGSYLKKWLVWLEANAD 736
>gi|32471647|ref|NP_864640.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SH 1]
gi|32397018|emb|CAD72321.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SH 1]
Length = 763
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 247/669 (36%), Positives = 357/669 (53%), Gaps = 65/669 (9%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLE 75
+++ +A +DLE EAE + R+ + G I+ L VD TGL G+ LL+
Sbjct: 99 EDYFEQLAIWLDLEAEAERARLAKLRQIRSQRDVESTGQAIVGLDMVDYHTGLAGRYLLD 158
Query: 76 FQSTKGDVLPAH--KFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEG 133
G LP + K G+ V+ + + +D G GVV R K+ SI +A D P
Sbjct: 159 LAKPGGKDLPMNRLKVGSPVVLSMDDDPSDEGI----AGVVSRRKNHSIQIATDSFPIRD 214
Query: 134 ---------------------LNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI 172
++ RL+ +E T R A+ + + G + L
Sbjct: 215 QDDLKKKGVGKHGKSGQRPAVVSDRFRLDMSPDETTRLRQLAAMAKAQE--IRGRSGKLR 272
Query: 173 PVLFGEQKPTVLKKDI--------AFK------PFNSNLDHSQKDAISKALSSKNVFMLH 218
VL G + P V I +F+ F + L+ Q+DA++ A+ + +V ++H
Sbjct: 273 DVLLGIKTPRVDGNPIDTHDIDPESFQFELNDIDFRTELNPPQRDAVAFAMMADDVAIIH 332
Query: 219 GPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLP 278
GPPGTGKTTT+ EII Q V+RG ++LACAASN AVDN++ERLV +VR+GHPAR+
Sbjct: 333 GPPGTGKTTTIAEIIAQSVERGERVLACAASNTAVDNLLERLVRLMPNVVRVGHPARVFE 392
Query: 279 QVLESALDAQVLRGDNSSLASDIRKEMKAL----NGKLLK--TKDKNTRREIQKELRTLS 332
+ E LDA V S++ D+R+E+ + N + + +++ R E+ E L
Sbjct: 393 SLQEHTLDALVESDPTSTVIKDLRRELDQILREANRPIREGGGRERKQRAELFNEAGRLR 452
Query: 333 KEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLK 392
R +++ V VI ADV+ TT T L + SFDLV++DE+ Q E W A+L+
Sbjct: 453 GMIRSQERSIVRAVIDRADVICTTTT-IDEELLSDQSFDLVVVDESCQCTEPGMWQAILR 511
Query: 393 GSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNW 452
R ILAGDH QLPPTV S +A + G+ +L +RL YG+++ LTVQYRM+E IM +
Sbjct: 512 ADRLILAGDHCQLPPTVLSDDAARIGMRDSLMQRLVHRYGEKIYRRLTVQYRMNESIMRF 571
Query: 453 SSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEE-DSTMN 501
SS Y+ + A S V+ T LLLID AG EE+ + + S +N
Sbjct: 572 SSDHFYDGTLIADASVKRHLLCDLPNVEENDFTSEPLLLIDTAGAGYEEELEPDGQSKLN 631
Query: 502 EGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQG 561
GEA+V + K+L GV I +I PYAAQV + LR + D L +E+ TVDGFQG
Sbjct: 632 HGEAKVILQLVKQLADLGVTGDQIAVIAPYAAQV---RNLRMRLD-LDGIEIDTVDGFQG 687
Query: 562 REKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEY 621
REKE ++I+M RSN E+GFLSD+RR NVA+TRA+R+ +V D+ T+ + F L Y
Sbjct: 688 REKEVVLITMTRSNPDGEIGFLSDQRRSNVALTRAKRKLIVVGDSATLCNHEFYSELFGY 747
Query: 622 FEEHAEYLS 630
FE+ Y S
Sbjct: 748 FEDAGAYHS 756
>gi|405355805|ref|ZP_11024917.1| hypothetical protein A176_1051 [Chondromyces apiculatus DSM 436]
gi|397091077|gb|EJJ21904.1| hypothetical protein A176_1051 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 639
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 232/639 (36%), Positives = 355/639 (55%), Gaps = 34/639 (5%)
Query: 18 FVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQ 77
F + L+ E+EAE + S L +++G ++L+L+ ++ + GL G+ L+
Sbjct: 7 FFDQLGSLLAQEREAEKARLAALAQSLTLHEREEQGLSVLDLESIEEEVGLGGRFLVTLG 66
Query: 78 STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIP----EEG 133
LP + D+V + P +A++ PA + ++ R + I +AFD P EG
Sbjct: 67 RVDRRPLPT-RLHNGDLVAVLPRRAEVKEPA--RALISRATATRIQLAFDRSPPPYVHEG 123
Query: 134 LNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPF 193
L LRL+ + N+VTY R++ A +Q K + G VL G + P K F+P
Sbjct: 124 L---LRLDVVPNDVTYDRLR-AGLQRIKALDKGAERHKREVLLGNEPPR-FDKPREFEP- 177
Query: 194 NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAV 253
L+ Q+DA ++AL+S++ F++HGPPGTGK+T + EI Q V G ++L AASN AV
Sbjct: 178 TRPLNPEQQDATARALASEDFFLVHGPPGTGKSTVLAEIAAQAVADGQRLLCTAASNAAV 237
Query: 254 DNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
D++++ + +R VR+GHPAR+ ++ E LD V + ++ ++ E +L G
Sbjct: 238 DHLLDLCLDKGLRAVRVGHPARVAARLQEHTLDIVVESHPDRVVSRELFDEAYSLLGYAR 297
Query: 314 KTKDKNTRRE-------IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLD 366
+ +++ RE E + + E R ++ AV V+ NADV+ TL+ S L
Sbjct: 298 RQRNQGRSRERFANARASTSEAKGMLDEARALERKAVKAVLANADVICVTLSSLDSGVLS 357
Query: 367 NTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFER 426
FDL ++DEA QA E + L+ R ILAGD QLPPTV S EA K GLG +LFER
Sbjct: 358 GEKFDLALLDEATQATEPLALLGFLRAPRVILAGDPQQLPPTVLSQEAAKAGLGVSLFER 417
Query: 427 LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST---------EP 477
L +G+ V ML QYRM+ IM + S+++Y +++AHPS R + P
Sbjct: 418 LLKDHGEGVKRMLREQYRMNARIMAFPSREMYAGELRAHPSVADRALAEVLTPGADVDAP 477
Query: 478 TLLLIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVV 536
+L +D AG EE+ + S N GEA + A + L+ +G+ ++ +ITPY+AQ
Sbjct: 478 PVLFLDTAGKGFEEEVEPTTRSLFNPGEAGLVEARVRALLAAGLSPRELAVITPYSAQA- 536
Query: 537 LLKILRSKDDKLK-NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
LR + + L ++EV TVD FQGREK+AII+S+ RSN + ++GFL+D RRMNVA+TR
Sbjct: 537 --HRLRERIEALSPDVEVDTVDAFQGREKDAIIVSLTRSNGEGQLGFLNDLRRMNVALTR 594
Query: 596 ARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
ARR +V D+ T+S F R +E +EH Y S E+
Sbjct: 595 ARRHLFVVGDSATLSGHAFYARFVEGTQEHGGYRSAWEW 633
>gi|440713093|ref|ZP_20893698.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SWK14]
gi|436442112|gb|ELP35280.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SWK14]
Length = 735
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 246/670 (36%), Positives = 357/670 (53%), Gaps = 66/670 (9%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLE 75
+++ +A +DLE EAE + R+ + G I+ L VD TGL G+ LL+
Sbjct: 70 EDYFEQLAIWLDLEAEAERARLAKLRQIRSQRDVESTGQAIVGLDMVDYHTGLAGRYLLD 129
Query: 76 FQSTKGDVLPAH--KFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEG 133
G LP + K G+ V+ + + +D G GVV R K+ SI +A D P
Sbjct: 130 LAKPGGKDLPMNRLKVGSPVVLSMDDDPSDEGI----AGVVSRRKNHSIQIATDTFPIRD 185
Query: 134 ----------------------LNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGL 171
++ RL+ +E T R A+ + + G + L
Sbjct: 186 QDDLKKKKGVGKHGKSGQRPAVVSDRFRLDMSPDETTRLRQLTAMAKAQE--IRGRSGKL 243
Query: 172 IPVLFGEQKPTVLKKDI--------AFK------PFNSNLDHSQKDAISKALSSKNVFML 217
VL G + P V I +F+ F + L+ Q+DA++ A+ + +V ++
Sbjct: 244 RDVLLGIKTPRVDGNPIDTHDIDPESFQFELNDIDFRTELNPPQRDAVAFAMMADDVAII 303
Query: 218 HGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLL 277
HGPPGTGKTTT+ EII Q V+RG ++LACAASN AVDN++ERLV +VR+GHPAR+
Sbjct: 304 HGPPGTGKTTTIAEIIAQSVERGERVLACAASNTAVDNLLERLVCLMPNVVRVGHPARVF 363
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEMKAL----NGKLLK--TKDKNTRREIQKELRTL 331
+ E LDA V S++ D+R+E+ + N + + +++ R E+ E L
Sbjct: 364 ESLQEHTLDALVESDPTSTVIKDLRRELDQILREANRPIREGGGRERKQRAELFNEAGRL 423
Query: 332 SKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL 391
R +++ V VI ADV+ TT T L + SFD+V++DE+ Q E W A+L
Sbjct: 424 RGMIRSQERSIVRAVIDRADVICTTTT-IDEELLSDQSFDVVVVDESCQCTEPGMWQAIL 482
Query: 392 KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN 451
+ R ILAGDH QLPPTV S +A + G+ +L +RL YG+++ LTVQYRM+E IM
Sbjct: 483 RADRLILAGDHCQLPPTVLSDDAARIGMRDSLMQRLVHRYGEKIYRRLTVQYRMNESIMR 542
Query: 452 WSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEE-DSTM 500
+SS Y+ + A S V+ T LLLID AG EE+ + + S +
Sbjct: 543 FSSDHFYDGTLIADASVKRHLLCDLPNVEENDFTSEPLLLIDTAGAGYEEELEPDGQSKL 602
Query: 501 NEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQ 560
N GEA+V + K+L GV I +I PYAAQV + LR + D L +E+ TVDGFQ
Sbjct: 603 NHGEAKVILQLVKQLADMGVTGDQIAVIAPYAAQV---RNLRMRLD-LDGIEIDTVDGFQ 658
Query: 561 GREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
GREKE ++I+M RSN E+GFLSD+RR NVA+TRA+R+ +V D+ T+ + F L
Sbjct: 659 GREKEVVLITMTRSNPDGEIGFLSDQRRSNVALTRAKRKLIVVGDSATLCNHEFYSELFG 718
Query: 621 YFEEHAEYLS 630
YFE+ Y S
Sbjct: 719 YFEDAGAYHS 728
>gi|365984191|ref|XP_003668928.1| hypothetical protein NDAI_0C00240 [Naumovozyma dairenensis CBS 421]
gi|343767696|emb|CCD23685.1| hypothetical protein NDAI_0C00240 [Naumovozyma dairenensis CBS 421]
Length = 699
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 253/659 (38%), Positives = 364/659 (55%), Gaps = 89/659 (13%)
Query: 51 KKGSTILNLKCVDAQTGLMGKTLLEF---QSTKGDVLPAHKFGTHDVVVLKP-----NKA 102
+ G I NL + +TGL GK LE + ++ T D+V++KP NKA
Sbjct: 38 ENGYAISNLLLENIKTGLGGKLYLELSPDNAINDSIVNNGNIKTGDIVLIKPLISHSNKA 97
Query: 103 -------------DLGSPALGQ----GVVYRLKDSSITVAFDDI---PEEGLNSPLR--- 139
D+ + G ++++ D IT+A ++ P+E + + L
Sbjct: 98 KHHRNKKAHEHNGDIDTNDTDNIQCDGTIFKISDQQITIALNESSQEPQENITTKLYSFN 157
Query: 140 ---LEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQ---KPTVLKKDIAFKPF 193
L K N +TY+RM+ + +LS+ + P+ +I L E+ K T +I F
Sbjct: 158 RLYLLKTTNTITYKRMESTMRKLSE-FEGIPSNKIIQYLLNERPFLKQTTSSNNIQFH-- 214
Query: 194 NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAV 253
N NL+ SQ++AI AL + ++ ++HGPPGTGKT T++E+I Q V+RG +IL C SNI+V
Sbjct: 215 NENLNQSQREAIKFALIN-DISIIHGPPGTGKTYTLIELIQQLVERGQRILVCGPSNISV 273
Query: 254 DNIVERL---VPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG 310
D I+ERL +P + L+R+GHPARLL L +LD GD ++ DI ++
Sbjct: 274 DTILERLNGVLPGNL-LLRIGHPARLLDSNLRHSLDILSKSGDAGAIVKDIYHDIDKTIS 332
Query: 311 KLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSR---KLDN 367
+ K K +RE KE++ L KE R R++ + D+I A VV+ TL G+ SR KL N
Sbjct: 333 GIKKLKSYKDKRESWKEVKELRKELRIRERKVINDLILEAKVVVATLHGSSSRDLCKLYN 392
Query: 368 -----TSFDLVIIDEAAQALEIACWIALLKG-----SRCILAGDHLQLPPTVQSVEAE-- 415
+ FD +IIDE +Q+LE CWI L+ S+ +LAGD+ QLPPT+++ + +
Sbjct: 393 DESVTSLFDTLIIDEVSQSLEPQCWIPLISHYKSDISKLVLAGDNKQLPPTIKTEDNKLV 452
Query: 416 KKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHP--------- 466
+K L TLF+RL +YGD+ +L VQYRM+E IM +SS ++Y K+ A
Sbjct: 453 QKLLQTTLFDRLVSIYGDQFRKLLNVQYRMNEEIMEFSSNEMYEGKLLADVTVASHLLSD 512
Query: 467 -SGVKRTSSTEPTLLLIDIAGCD-MEEKKDEE--------------DSTMNEGEAEVAMA 510
SGV T+ L+ D G + ME D S NE EA V
Sbjct: 513 LSGVDSNEDTDIPLIWYDTQGDEFMESVSDSNTNNNNNNNNNNPLASSKFNENEALVVKD 572
Query: 511 HAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIIS 570
H ++LI S V IGII+PY+AQV LLK L D L +E+STVDGFQGREKE II+S
Sbjct: 573 HVEKLIASNVPQECIGIISPYSAQVNLLKSLIRTDYPL--IEISTVDGFQGREKEVIILS 630
Query: 571 MVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV--SSDGFLKRLIEYFEEHAE 627
+VRSN K EVGFLSD RR+NVA+TR +RQ C+V + E + S FLK+ ++ EE++E
Sbjct: 631 LVRSNDKFEVGFLSDDRRLNVAMTRPKRQLCVVGNIECLQRSQVPFLKKWADWSEENSE 689
>gi|363750954|ref|XP_003645694.1| hypothetical protein Ecym_3390 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889328|gb|AET38877.1| Hypothetical protein Ecym_3390 [Eremothecium cymbalariae
DBVPG#7215]
Length = 663
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 245/669 (36%), Positives = 381/669 (56%), Gaps = 57/669 (8%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQ--KKGSTILNLKCVDAQTGLMGKTL 73
+E + ID E++ ++ ITS + L ++ G + +L+ + +TGL GK
Sbjct: 3 KELAEKLLQCIDHEQQQDVE--ITSRLLKELPLSKLVSAGLAVNHLQLENVRTGLGGKVY 60
Query: 74 LEFQSTKG--DVLPAHKFGTHDVVVLKPNKADLG---SPALGQGVVYRLKDSSITVAFDD 128
L+ +V+ + D+V + +K+ +G A +GVV++ D I V+ D+
Sbjct: 61 LDLTPDPAIDNVISVGETSVGDIVKIYSSKS-VGKKDEAAALEGVVFKSNDKQIVVSVDE 119
Query: 129 IPEEGL-----NSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
E S L L K AN +TY+RM+ + +L++ ++ P +I L +++
Sbjct: 120 SKESDAFKLYEASKLYLVKTANSITYKRMQSTMRKLAE-IEGTPNNSIIQYLLCQRQFVE 178
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
K I N NL+ SQK AI AL ++ + ++HGPPGTGKT T+VE+I+Q VK+G +I
Sbjct: 179 QKDSIEISFHNQNLNDSQKKAIKFALQNE-ISIIHGPPGTGKTYTLVELIMQLVKQGQRI 237
Query: 244 LACAASNIAVDNIVERL---VPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
L C SNI+VD I+ERL +P + L+R GHPARLLP L ++D GD S+ D
Sbjct: 238 LICGPSNISVDTILERLAKVIPGNL-LLRFGHPARLLPSTLAHSIDVISKSGDAGSIIRD 296
Query: 301 IRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA 360
I +E+ ++ K K R++ +E++ L KE ++R++ ++++I A VV+ TL G+
Sbjct: 297 INQEINNHLLQIKKFKSYRDRKKAWQEIKDLRKELKQRERRVISELILAAKVVVCTLHGS 356
Query: 361 VSRKL------DNTSFDLVIIDEAAQALEIACWIALLKG-----SRCILAGDHLQLPPTV 409
S L + F+ +IIDE +Q+LE CWI L+ S+ ++AGD+ QLPPT+
Sbjct: 357 SSGNLCRVYDFEPKLFNTLIIDEVSQSLEPQCWIPLISHYKSNISKLVIAGDNKQLPPTI 416
Query: 410 QSVEAEK--KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS 467
++ + EK K LG T+F++L + YG++ +L VQYRM+E IM + S QLY ++ A +
Sbjct: 417 KTEDDEKVKKILGTTIFDKLENHYGNDFKKLLNVQYRMNEQIMEFPSHQLYKDELIAAEA 476
Query: 468 ----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEED-------STMNEGEAEVAMA 510
GV+ +T LL D G D EK +E + S NE EA + +
Sbjct: 477 VAKITLADLPGVEVDDNTSVPLLWFDTQGDDFLEKSEEVNGVLDIASSKYNENEAYLLIH 536
Query: 511 HAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIIS 570
+ +L+ S V IGII+PY AQV LL+ L +K +E+S+VDGFQGREK+ II+S
Sbjct: 537 YVSQLLNSNVSQESIGIISPYNAQVSLLRKLVH--EKYSLIEISSVDGFQGREKDCIILS 594
Query: 571 MVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV--SSDGFLKRLIEYFEEHAE- 627
+VRSN EVGFL D RR+NVA+TRA+RQ C++ + ET+ S FLK + + EE++E
Sbjct: 595 LVRSNDLFEVGFLRDERRLNVAMTRAKRQLCVIGNMETLERSQVPFLKEWVRWSEENSEI 654
Query: 628 -YLSGSEYL 635
Y S++L
Sbjct: 655 RYPDLSDFL 663
>gi|358057175|dbj|GAA97082.1| hypothetical protein E5Q_03757 [Mixia osmundae IAM 14324]
Length = 733
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 246/722 (34%), Positives = 370/722 (51%), Gaps = 114/722 (15%)
Query: 18 FVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQ 77
F+S LI+LE++ E+ + ++ ++ ++ G +L V+ G KT++E Q
Sbjct: 11 FISDQKALIELERDVEVRQTNLLSSNCSIKQLERSGLAFGSLDVVNRSIGFGDKTIIELQ 70
Query: 78 STKGD----VLPAHKFGTHDVVVL-----KPNKADLGSPALGQGVVYRLKDSSITVAFDD 128
+ VLP+ + D++ L KP+K + VVY+L + + +A +
Sbjct: 71 RSLAHHADRVLPSSEIRVGDLIKLTESATKPSKYKERHQNGTEAVVYKLTEHKLVLAVSE 130
Query: 129 IPEEGLNSPLRLE------KLANEVTYRRM------------------------------ 152
+G++ L L KLAN TY R+
Sbjct: 131 SSPKGIDGELELPSRCNVVKLANLGTYDRILRNYDSLAKSLLKREEVRRHASTADDDAAR 190
Query: 153 --KDALIQLSKG----VQNG-------PAAG-----------------LIPVLFGEQKPT 182
D++I L + V NG PA G L +L G Q+ +
Sbjct: 191 PVYDSVIPLQRSEAQMVDNGVQPACLEPAIGADSDRKARLDETSASLSLSQILLGMQEIS 250
Query: 183 VLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSK 242
++ + L+ SQ+DA+ AL ++ V ++HGPPGTGKT+T++EII Q V+ G +
Sbjct: 251 EPQQKSDVTILDDALNQSQQDAVKFALHAREVALIHGPPGTGKTSTLIEIIRQLVRLGQR 310
Query: 243 ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR 302
+L C ASN+AVDNIVERL H V L RLGHPAR+L S LD Q N +LA D+R
Sbjct: 311 VLVCGASNLAVDNIVERLQVHSVPLTRLGHPARILEATQRSTLDYQTAHSANGALAQDVR 370
Query: 303 KEMKALNGKLLKTKDKNT-RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAV 361
++ + L K K + RR E++ L KE R R+ + VI A VVL T GA
Sbjct: 371 DDIAKIFADLAKGKLQGKGRRAKLDEIKLLRKELRVREAGVTSSVIGQARVVLCTCHGAG 430
Query: 362 SRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKK---- 417
S+++ +FD+ IIDEAAQALE +CWI +LK + +LAGD LQLPPT+++ + + K
Sbjct: 431 SKQIMRDTFDVAIIDEAAQALEGSCWIPILKAQKLVLAGDPLQLPPTIKTSDKDFKQAKV 490
Query: 418 ---------------GLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKI 462
L TLF+RL +YG ++ +L++QYRM+E IM ++S LY K+
Sbjct: 491 SLASISKSSKLCSARNLETTLFDRLLAMYGAKIKCLLSIQYRMNERIMRFASDALYEGKL 550
Query: 463 KAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEED-----STMNEGEAEV 507
A K + ++ ID G DM E+ DEE S NE EA
Sbjct: 551 VAALQVKDRLLCDLVETKGDDVLDHPVIFIDTTGNDMYERADEETGVRTLSKYNENEAVQ 610
Query: 508 AMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAI 567
+ H ++ +G+ I +I+PY AQV LL+ L L ++ V ++D +QGRE E I
Sbjct: 611 VVKHISEIVSAGLPPKCIAVISPYNAQVSLLRSLLV---HLPDISVGSIDSWQGREAECI 667
Query: 568 IISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV-SSDGFLKRLIEYFEEHA 626
IIS+VRSN ++EVGFL + RR+NVA+TRA+RQ C+V D TV + +L+R + + E+ +
Sbjct: 668 IISLVRSNDQREVGFLKESRRLNVAMTRAKRQLCVVGDAGTVRTGSSYLERWMTWLEDES 727
Query: 627 EY 628
+Y
Sbjct: 728 DY 729
>gi|50309513|ref|XP_454766.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643901|emb|CAG99853.1| KLLA0E18085p [Kluyveromyces lactis]
Length = 681
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 238/629 (37%), Positives = 360/629 (57%), Gaps = 60/629 (9%)
Query: 53 GSTILNLKCVDAQTGLMGKTLLEFQSTKGDV--LPAHKFGTHDVVVLKPN---KADLGSP 107
G I +L+ + +TG+ K LE + L F D+V+++P+ K+
Sbjct: 49 GLAINHLQLDNIRTGIGSKLYLELSADPAITKELNTGSFKVGDIVLVQPSAKAKSKKDET 108
Query: 108 ALGQGVVYRLKDSSITVAFDDIPEE------GLNSPLRLEKLANEVTYRRMKDALIQLSK 161
VV ++ ++ I +A D+ ++ N L L K N +TY+RM+ + +L++
Sbjct: 109 VNLDAVVSKVSNNQIVLAVDESKDQDAVQLYSFNR-LCLLKTTNTITYKRMQSTMRKLAE 167
Query: 162 GVQNGPAAGLIPVLFGEQKPTVLKKDIA--FKPFNSNLDHSQKDAISKALSSKNVFMLHG 219
+ P LI + E+K +KKD K +N L+ SQ+DAI +LS++ + ++HG
Sbjct: 168 -FNSIPDNILIQYMLHERK--FIKKDPEHNVKFYNEQLNESQRDAIQHSLSNE-ISIIHG 223
Query: 220 PPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERL---VPHRVRLVRLGHPARL 276
PPGTGKT T+VE+I Q RG +IL C SNI+VD I+ERL VP L+R+GHP+RL
Sbjct: 224 PPGTGKTYTLVELIKQLYDRGERILVCGPSNISVDTILERLSKVVPGD-ELLRIGHPSRL 282
Query: 277 LPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEER 336
LPQVL +LD +GD+ + DI KE+ + K K R++ +E++ L KE R
Sbjct: 283 LPQVLSHSLDVLSKKGDSGMILKDIMKEIDDTIASVKKLKSSRDRKKGWQEVKALRKELR 342
Query: 337 KRQQLAVTDVIKNADVVLTTLTGAVSRKL------DNTSFDLVIIDEAAQALEIACWIAL 390
+R++ + ++I + +V+ TL G+ SR+L + F+ +IIDE +Q+LE CWI L
Sbjct: 343 QREKSGLINIILKSKIVVCTLHGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPL 402
Query: 391 LKG-----SRCILAGDHLQLPPTVQSVEAEK--KGLGRTLFERLADLYGDEVTSMLTVQY 443
+ R I+AGD QLPPT+++ + +K + L T+F+RL YG+E +L VQY
Sbjct: 403 ISHLKSDMQRLIIAGDDKQLPPTIKTEDNDKVKRLLSTTVFDRLLQHYGNEFKYLLNVQY 462
Query: 444 RMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKK 493
RM+E IM +SS +LY+ K+KA S GV+ +T + +D G D E+
Sbjct: 463 RMNEEIMQFSSNELYDGKLKADDSVAKQLLADLPGVESNDNTTFPCIWLDTEGDDFPERS 522
Query: 494 DEED-----------STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
DE D S NE EA +A+ H ++LI++GV IG+I+PY +QV LLK L
Sbjct: 523 DENDNDADDKFHLVSSKYNENEAYLALYHVEQLIKAGVTEESIGVISPYNSQVSLLKKLI 582
Query: 543 SKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCL 602
+K + +E+STVDGFQGREKE II+S+VRSN EVGFL D RR+NVA+TR +RQ C+
Sbjct: 583 H--EKHQAIEISTVDGFQGREKECIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCV 640
Query: 603 VCDTETVSSD--GFLKRLIEYFEEHAEYL 629
+ + E +S FL R + + E E +
Sbjct: 641 IGNMEMLSRCRVPFLNRWVLWVESGFEVI 669
>gi|108758058|ref|YP_634107.1| DNA helicase [Myxococcus xanthus DK 1622]
gi|108461938|gb|ABF87123.1| putative DNA helicase [Myxococcus xanthus DK 1622]
Length = 639
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 230/639 (35%), Positives = 355/639 (55%), Gaps = 34/639 (5%)
Query: 18 FVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQ 77
F + L+ E+EAE + S L+ ++ G ++L+L+ ++ + GL G+ L+
Sbjct: 7 FFDQLGSLLAQEREAEKARLAALAQSLTLNEREEHGLSVLDLESIEEEVGLGGRFLVTLG 66
Query: 78 STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIP----EEG 133
LP + D+V + P +A++ PA + ++ R + I +AFD P EG
Sbjct: 67 RADRRPLPT-RLHNGDLVAVLPRRAEVKEPA--RALISRATATRIQLAFDRSPPPYVHEG 123
Query: 134 LNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPF 193
L LRL+ + N+VTY R++ A +Q K + G V+ G + P K F+P
Sbjct: 124 L---LRLDVVPNDVTYDRLR-AGLQRIKALDKGAERHKREVVLGNEPPR-FDKPREFEP- 177
Query: 194 NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAV 253
L+ Q+DA ++AL++++ F++HGPPGTGK+T + E+ Q V G ++L AASN AV
Sbjct: 178 TRPLNPEQQDATARALAAEDFFLVHGPPGTGKSTVLAEVAAQAVADGKRLLCTAASNAAV 237
Query: 254 DNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
D++++ + +R +R+GHPAR+ ++ E LD V + +++ D+ E +L G
Sbjct: 238 DHLLDLCLDKGLRAIRVGHPARVAARLQEHTLDIVVESHPDRAVSRDLFDEAFSLLGYAR 297
Query: 314 KTKDKNTRRE-------IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLD 366
+ +++ RE E + + E R ++ AV V+ NADV+ TL+ S L
Sbjct: 298 RQRNQGRSRERFANARASTTEAKGMLDEARALERKAVKSVLANADVICVTLSSLDSGVLS 357
Query: 367 NTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFER 426
FDL ++DEA QA E + L+ R ILAGD QLPPTV S EA K GLG +LFER
Sbjct: 358 GQQFDLALLDEATQATEPLALLGFLRAPRVILAGDPQQLPPTVLSQEAAKAGLGVSLFER 417
Query: 427 LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST---------EP 477
L +G+ V ML QYRM+ IM++ S+++Y +++AHPS RT P
Sbjct: 418 LLKDHGEGVKRMLREQYRMNARIMDFPSREMYGGELRAHPSIADRTLDAVLTPGADVDAP 477
Query: 478 TLLLIDIAGCDM-EEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVV 536
+L +D AG EE + S N GEA + A + L+ +G+ ++ +ITPY+AQ
Sbjct: 478 PVLYLDTAGKGFDEEVEPTTRSLFNPGEAGLVEARVRALLAAGLAPRELAVITPYSAQA- 536
Query: 537 LLKILRSKDDKLK-NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
LR + + L +EV TVD FQGREK+AII+S+ RSNS+ ++GFL+D RRMNVA+TR
Sbjct: 537 --HQLRERIEALSPEVEVDTVDAFQGREKDAIIVSLTRSNSEGQLGFLTDLRRMNVALTR 594
Query: 596 ARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
ARR +V D+ T+S F R +E + H Y S E+
Sbjct: 595 ARRHLFVVGDSATLSGHPFYARFVEGTQTHGGYRSAWEW 633
>gi|171687455|ref|XP_001908668.1| hypothetical protein [Podospora anserina S mat+]
gi|170943689|emb|CAP69341.1| unnamed protein product [Podospora anserina S mat+]
Length = 827
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 262/809 (32%), Positives = 389/809 (48%), Gaps = 195/809 (24%)
Query: 12 AVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGK 71
A+ + F S L+ E +AE+ + + + Q+ G + NL + +TGL GK
Sbjct: 2 AIDIPTFASTQISLLAAELQAEVDETSMLVSLHSPTALQRAGVALTNLAVLSQRTGLGGK 61
Query: 72 TLLEFQ-----STKGDVLPAHKFGTHDVVVLKPNKADLGSP--------ALGQGVVYRLK 118
T++E S GD LP H + D+V+L A G +GVV R+
Sbjct: 62 TVVEVGPDGAFSCSGD-LPEHGIRSGDIVLLAEQPAASGKKREVKELERKGVKGVVTRVG 120
Query: 119 DSSITVAFDDIPEEGLNSP-----LRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIP 173
+ VA ++ E + + KLA+EVT++RM + +++K + G + +
Sbjct: 121 RQGLGVAVEEDGEGEGEVVGGDRRVWIVKLADEVTWKRMNGTMEKMAK-MAEGEYSYFMR 179
Query: 174 VLFGEQKPTVLKKDIA---------FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPG-- 222
VLFG P+ + +D++ K F+++L+ SQKDAI AL S+ + ++HGPPG
Sbjct: 180 VLFGLTTPSPVPEDLSKDEEVGEGKIKWFDTSLNESQKDAIRFALKSQEIALIHGPPGVS 239
Query: 223 ---------------------TGKTTTVVEIILQ--EVKRGSKILACAASNIAVDNIVER 259
TGKT T++E+ILQ + S+IL C SNI+VDNIVER
Sbjct: 240 FFFFLVFFPFPFLYTNLPPKKTGKTHTLIELILQLLALNSNSRILVCGPSNISVDNIVER 299
Query: 260 LVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKN 319
L PH++ L+RLGHPARLLP VL +LD + ++ D+R EM A + KT+
Sbjct: 300 LSPHKIPLIRLGHPARLLPSVLNHSLDVLTRTSEAGAIVKDVRAEMDAKQASIRKTRSGK 359
Query: 320 TRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAA 379
R+ I +L+ L KE R+R++ V+D++ + VVL TL G+ +L + FD+VIIDEA+
Sbjct: 360 ERKAIYADLKELRKEYRQREKKCVSDLVAKSKVVLATLHGSGGYQLRDEKFDVVIIDEAS 419
Query: 380 QALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEK----------------------- 416
QALE CW+ALL + I AGDHLQLPPT++S+ +
Sbjct: 420 QALEAQCWVALLSAKKAICAGDHLQLPPTIKSLNSSSSSSFFSSSKTSSKNSSTSGEKKT 479
Query: 417 -----------------KG--LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQL 457
KG L TLF+RL L+G ++ MLT QYRMHE IM + S +L
Sbjct: 480 AKTKKDTAASNTPPTIPKGATLETTLFDRLLSLHGPKIKRMLTTQYRMHESIMRFPSDEL 539
Query: 458 YNSKIKA----------HPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEE----------- 496
Y K+ A V+ T L+ ID G D EK ++E
Sbjct: 540 YEGKLIAAEGVKARLLNQLPDVRDVDETREPLVFIDTQGGDFPEKTEDEEEEEEKKKKGV 599
Query: 497 -------DSTMNEGEAEVAMAHAKRLIQ-SGVHASDIGIITPYAAQVVL----------- 537
DS NEGEA + H + L++ GV A D+ +++PY AQV
Sbjct: 600 TKRSLYGDSKRNEGEAMLVREHVRCLVEDGGVRAEDVAVVSPYNAQVCFSLTSIQAVTLE 659
Query: 538 -------------------------------------LKILRSKDDKLKNMEVSTVDGFQ 560
L +L ++ +E+ +VDGFQ
Sbjct: 660 LPGTDRTTMRSFVIATSKQHPSLSFSPSRIRGRTWTRLALLAPLKEQYPGIELGSVDGFQ 719
Query: 561 GREKEAIIISMVRSNSKKEVGFLSDRRRMN---------------------VAVTRARRQ 599
GREKEA+I+++VRSNS EVGFL+++RR+N VA+TRA+R
Sbjct: 720 GREKEAVIVTLVRSNSDGEVGFLAEKRRLNGTFILFYSGGLVRVEMGVNARVAMTRAKRS 779
Query: 600 CCLVCDTETVSSDG-FLKRLIEYFEEHAE 627
++ D+ETV FLK+ +E+ EE+A+
Sbjct: 780 LTVIGDSETVKKGSKFLKKWMEFLEENAD 808
>gi|326507228|dbj|BAJ95691.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 980
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 247/696 (35%), Positives = 378/696 (54%), Gaps = 82/696 (11%)
Query: 5 KTKEKQSAVSLQEFVSVMAPLIDLEKEAEI--------SASITSGASR-----------N 45
KT+ Q+ + ++FV M+ L+++E++AE+ + T GA++ +
Sbjct: 268 KTRLMQTKI--EDFVKKMSDLLNIERDAELEFTQEELNAIPTTDGAAKQPLKPVEYLVSH 325
Query: 46 LDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKP--NKAD 103
Q++ T+ NL + TGL G L+ F+ LP D+V ++ N+ +
Sbjct: 326 GQAEQEQCDTVCNLNVISTSTGLGGLRLVLFRVEGTHKLPPSTLSPGDMVCVRTCNNQGE 385
Query: 104 LGSPALGQGVVYRLKD--SSITVAFDDIPEEGLNSPL--------RLEKLANEVTYRRMK 153
+G+ + QG ++ L + SITV+ P + S R++ LA+ +TY R
Sbjct: 386 VGTSCV-QGFIHNLGEDGCSITVSLKSRPGDPTFSKFSGKSVRIDRIQALADGLTYERNC 444
Query: 154 DALIQLS-KGVQNGPAA-GLIPVLFGEQKP-TVLKKDIA-------------FKPFNSNL 197
+ALI L KG+Q A+ G++ LFG+++ T+L+++ + +
Sbjct: 445 EALILLQRKGLQKTNASIGVVATLFGDKEDMTMLEQNNLTDWGESAIQDAGLLRKHKYDF 504
Query: 198 DHSQKDAISKALSSKN-VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNI 256
D SQ AIS L+ K V ++ GPPGTGKT + +I V++G ++L A SN AVDN+
Sbjct: 505 DASQSQAISLGLNKKRPVLVIQGPPGTGKTGLLSYLIDCAVQQGERVLVTAPSNAAVDNM 564
Query: 257 VERLVPHRVRLVRLGHPARLLPQVLESALDAQVLR------GDNSSLASDIRKEMKALNG 310
VE+L + +VR+G+PAR+ P V +L V R + S++RK++K
Sbjct: 565 VEKLSGTGLNIVRVGNPARISPSVSSRSLGELVKRRLEKFTQEFQRKKSNLRKDLKQC-- 622
Query: 311 KLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
+D + I++ L+ L K RK++ + +V+ NADVVL+T GA + F
Sbjct: 623 ----LQDDSLASGIRQLLKKLGKNFRKKENEIIKEVLSNADVVLSTNIGAADPLIKEIGF 678
Query: 371 -DLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
DLVIIDEA QA+E +CWI +L+G RCILAGD QL P + S EA + GLG +L ER +
Sbjct: 679 FDLVIIDEAGQAIEPSCWIPILRGKRCILAGDQHQLAPVILSREAMQGGLGMSLLERASS 738
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTL 479
L+ + +T+ LT+QYRMHE I NW+S ++Y +K+ PS ++ T T L
Sbjct: 739 LHDELLTTKLTMQYRMHESIANWASNEMYFGLLKSSPSVASRLLVDYPSIQETWITRCAL 798
Query: 480 LLIDI------AGCDMEEKKD--EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPY 531
LL+D D EE D S N GEA++ H L+ GV + I + +PY
Sbjct: 799 LLLDTRMPYGSLNIDCEENLDLAGTGSFYNSGEADIVAQHVVNLVLCGVSPTSIAVQSPY 858
Query: 532 AAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNV 591
AQV LL+ + + +EVST+D FQGRE +A++ISMVRSNS VGFL D RRMNV
Sbjct: 859 IAQVQLLRDRLEEYPEALGVEVSTIDSFQGREADAVVISMVRSNSLGAVGFLGDNRRMNV 918
Query: 592 AVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAE 627
A+TRARR LVCD+ T+ ++ FL RL+ + +H +
Sbjct: 919 AITRARRHVALVCDSFTICNNEFLARLLRHIRQHGQ 954
>gi|338532930|ref|YP_004666264.1| putative DNA helicase [Myxococcus fulvus HW-1]
gi|337259026|gb|AEI65186.1| putative DNA helicase [Myxococcus fulvus HW-1]
Length = 639
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 230/639 (35%), Positives = 352/639 (55%), Gaps = 34/639 (5%)
Query: 18 FVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQ 77
F + L+ E+EAE + S L ++ G ++L+L+ ++ + GL G+ L+
Sbjct: 7 FFDQLGSLLAQEREAEKARLAALAQSLTLHEREEHGLSVLDLESIEEEVGLGGRFLVTLG 66
Query: 78 STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIP----EEG 133
LP + D+V + P +A++ PA + ++ R + I +AFD P EG
Sbjct: 67 RADRRPLPT-RLHNGDLVAVLPRRAEVKEPA--RALISRATSTRIQLAFDRSPPPYVHEG 123
Query: 134 LNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPF 193
L LRL+ + N+VTY R++ A +Q K + G VL G + P K +P
Sbjct: 124 L---LRLDVVPNDVTYDRLR-AGLQRIKALDKGAERHRREVLLGNEPPRY-DKPRELEP- 177
Query: 194 NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAV 253
L+ Q+DA ++AL++++ F++HGPPGTGK+T + EI Q V G ++L AASN AV
Sbjct: 178 TRPLNPEQQDATARALAAEDFFLVHGPPGTGKSTVLAEIAAQAVADGKRLLCTAASNAAV 237
Query: 254 DNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
D++++ + +R +R+GHPAR+ ++ E LD V + ++ D+ E +L G
Sbjct: 238 DHLLDLCLDKGLRAIRVGHPARVAARLQEHTLDIVVESHPDRGVSRDLFDEAYSLLGYAR 297
Query: 314 KTKDKNTRRE-------IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLD 366
+ + + RE E + + E R ++ AV V+ NADV+ TL+ S L
Sbjct: 298 RQRTQGRSRERFANARASTSEAKGMLDEARALERKAVRSVLANADVICVTLSSLDSGVLA 357
Query: 367 NTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFER 426
FDL ++DEA QA E + L+ R ILAGD QLPPTV S EA K GLG +LFER
Sbjct: 358 GEQFDLALLDEATQATEPLALLGFLRAPRVILAGDPQQLPPTVLSQEAAKAGLGVSLFER 417
Query: 427 LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST---------EP 477
L +G+ V ML QYRM+ IM++ S+++Y +++AHPS RT P
Sbjct: 418 LLKDHGEGVKRMLREQYRMNARIMDFPSREMYGGELRAHPSVADRTLDAVLTPGADVDAP 477
Query: 478 TLLLIDIAGCDMEEK-KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVV 536
+L +D AG EE+ + S N GEA + A + L+ +G+ ++ +ITPY+AQ
Sbjct: 478 PVLYLDTAGKGFEEEVEPTTKSLFNPGEAGLVEARVRALLAAGLSPRELAVITPYSAQA- 536
Query: 537 LLKILRSKDDKLK-NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
LR + + L +EV TVD FQGREK+A+I+S+ RSNS+ ++GFL+D RRMNVA+TR
Sbjct: 537 --HQLRERIEALSPEVEVDTVDAFQGREKDAVIVSLTRSNSEGQLGFLTDLRRMNVALTR 594
Query: 596 ARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
ARR +V D+ T+S F R +E + H Y S E+
Sbjct: 595 ARRHLFVVGDSATLSGHPFYTRFVEGTQAHGGYRSAWEW 633
>gi|255711959|ref|XP_002552262.1| KLTH0C00770p [Lachancea thermotolerans]
gi|238933641|emb|CAR21824.1| KLTH0C00770p [Lachancea thermotolerans CBS 6340]
Length = 659
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 244/627 (38%), Positives = 357/627 (56%), Gaps = 67/627 (10%)
Query: 52 KGSTILNLKCVDAQTGLMGKTLLEF--------QSTKGDVLPAHKFGTHDVVVLKPNKAD 103
KG I +L + ++GL G+ +E + +GDV D+VV++P+ A
Sbjct: 39 KGLAINHLTLQNVRSGLAGRLYVELGPDTAIDQEIIRGDVRNG------DLVVIRPSGAK 92
Query: 104 LGSPALGQGVVYRLKDSSITVAFDDIPE-EGLNSPLRLE----KLANEVTYRRMKDALIQ 158
+ + +GVV + + ITVA D+ E + LN L K N +TY+RM+ L +
Sbjct: 93 KDAFSC-EGVVTKCSEKCITVAVDEAQEKDALNLYSSLRLYLLKTTNTITYKRMQSTLRK 151
Query: 159 LSK--GV-QNGPAAGLI--PVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKN 213
L + GV QN L+ PV + +P LK D FN +L+ SQK AI +L ++
Sbjct: 152 LCEFDGVPQNEVIQYLLDAPVFTSQTQP--LKVDF----FNPDLNTSQKKAIEFSLQNR- 204
Query: 214 VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERL--VPHRVRLVRLG 271
+ ++HGPPGTGKT TVVE++ Q +G ++L C SNIAVD I+ERL V L+R+G
Sbjct: 205 ISIIHGPPGTGKTHTVVELVHQLYNKGQRVLVCGPSNIAVDTILERLAKVMPGESLLRIG 264
Query: 272 HPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTL 331
HPARLL L +L+ GD ++ DI KE+ + K K R+E KE+R L
Sbjct: 265 HPARLLESNLSHSLEVLSKSGDAGAITKDISKEIDDTIASIKKLKSYKQRKEQWKEVREL 324
Query: 332 SKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS------FDLVIIDEAAQALEIA 385
KE + R++ ++D++ +A VV++TL G+ +R+L + FD +IIDE +Q+LE
Sbjct: 325 RKELKLREKKVISDLVLSARVVVSTLHGSSARELVDCYKHTDHIFDTLIIDEVSQSLEPQ 384
Query: 386 CWIALLKG-----SRCILAGDHLQLPPTVQSVEAEK--KGLGRTLFERLADLYGDEVTSM 438
CWI L+ + +LAGD QLPPT+++ + K LG TLF+RL YGD ++
Sbjct: 385 CWIPLIAHYKSDIQKLVLAGDDKQLPPTIKTEDNTKVKNTLGTTLFDRLVKKYGDSFRNL 444
Query: 439 LTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT----------SSTEPTLLLIDIAGCD 488
L QYRM+ IM +SS ++Y+ K+KA S T +TE L+ D D
Sbjct: 445 LDTQYRMNSEIMEFSSIKMYDGKLKAADSVASWTLVDLPATECNENTEVPLIWYDTQAGD 504
Query: 489 MEEKKDEEDS------TMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
E+ +++DS NE EA +A+ H LI S V IGII+PY AQV LK +
Sbjct: 505 FPERAEDQDSGSLVSSKYNENEAFLALHHVTSLIDSNVPQECIGIISPYNAQVAFLK--K 562
Query: 543 SKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCL 602
+ + +E+STVDGFQGREKE II+S+VRSN K EVGFLSD+RR+NVA+TR ++Q C+
Sbjct: 563 TVHPQYPLVEISTVDGFQGREKEVIILSLVRSNDKFEVGFLSDQRRLNVAMTRPKKQLCV 622
Query: 603 VCDTETVSSDG--FLKRLIEYFEEHAE 627
+ + ET+ G +LK + + EEH+E
Sbjct: 623 IGNMETLERSGIEYLKDWVRWSEEHSE 649
>gi|150866204|ref|XP_001385714.2| hypothetical protein PICST_61353 [Scheffersomyces stipitis CBS
6054]
gi|149387460|gb|ABN67685.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 716
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 259/697 (37%), Positives = 384/697 (55%), Gaps = 104/697 (14%)
Query: 26 IDLEKEAEI---SASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF---QST 79
I++E+++++ ++ +TS + L + G ++NL + +TGL GKT++E +
Sbjct: 18 INIEQKSDVLVTNSYLTSYPPKQL---ARLGLAVVNLIVNNVRTGLGGKTIIELGVDPAL 74
Query: 80 KGDVLPAHKFGT---HDVVVL------KPN-KADLGSPALGQGVVYRLKDSSITVAF--D 127
K D + GT D+ L K N K DL +L VV ++ +SI V+ D
Sbjct: 75 KKDSSDEIQVGTLRVGDIKALANSSKKKENVKTDLTDESL-DAVVIKMNQTSIAVSVEED 133
Query: 128 DIPEEGLN---------SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGE 178
E+ LN + + L KL+N +TY+R+ + +L + + + + +L GE
Sbjct: 134 STDEKVLNLYNNSSNDNTRMWLVKLSNSITYKRLISTMNKLGE-MGDSEKNYITRLLLGE 192
Query: 179 QKPTVLKK-----DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII 233
+ L K D F FN+ L+ SQKDAIS A++ + ++HGPPGTGKT T++E+I
Sbjct: 193 SVYSPLVKVTKMADDLF--FNNQLNQSQKDAISFAVNDSPITIIHGPPGTGKTYTLIELI 250
Query: 234 LQEV-KRGSKILACAASNIAVDNIVERLVP-HRVRLVRLGHPARLLPQVLESALD--AQV 289
Q V G K+L C SNI+VD I+ERL P R L+R+GHPARLL L+ +LD ++
Sbjct: 251 KQLVFNHGEKVLVCGPSNISVDTILERLSPVFRGGLIRIGHPARLLAGNLQHSLDILSKT 310
Query: 290 LRGD-----NSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVT 344
G N + DI K++ GK+ K+K RR + +L+ L KE R R++ V+
Sbjct: 311 NYGGGESSGNKEILRDIEKDIGETLGKIKKSKRYAERRALWADLKVLKKELRVREKKIVS 370
Query: 345 DVIKNADVVLTTLTGAVSRKL-------------DNTSFDLVIIDEAAQALEIACWIAL- 390
D++ +ADV+L+TL GA + +L DN FD +IIDE +Q+LE CWI L
Sbjct: 371 DLLLHADVILSTLHGAGAYELTSLYKEESQNFGADNPFFDTIIIDEVSQSLEPQCWIPLV 430
Query: 391 --LKGSRCILAGDHLQLPPTVQS------------VEAEK-KGLGRTLFERLA-DLYGDE 434
L R ++AGD++QLPPTV+S +E K L TLF+RL D GD
Sbjct: 431 NHLGFKRLVIAGDNMQLPPTVKSKDEIESLISSMSLEQSKVANLEHTLFDRLVQDHNGDA 490
Query: 435 VTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDI 484
+L QYRM+E+IM + S++LY K++AH S GV + T + D
Sbjct: 491 FKKLLDTQYRMNENIMKFPSRELYEEKLRAHESVRDISLLDLKGVADSDETRAMCIWYDT 550
Query: 485 AGCDMEEKKDEED---------STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQV 535
G D EK +ED S NE EA V H K+L++SGV IG+I+PY AQV
Sbjct: 551 QGGDFPEKSSDEDAKSLADSTGSKFNEMEALVVTQHIKKLLESGVAPEHIGVISPYNAQV 610
Query: 536 VLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
+LK + K +E+STVDGFQGREKE IIIS+VRSN +E+GFL D+RR+NVA+TR
Sbjct: 611 SVLKKIIQKGGS--RIEISTVDGFQGREKEVIIISLVRSNDNREIGFLKDKRRLNVAMTR 668
Query: 596 ARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
+RQ C++ D E +S+ G +++ +++ GS
Sbjct: 669 PKRQLCVIGDLELMSTCG-----VKFLHNWCQFVEGS 700
>gi|366996476|ref|XP_003678001.1| hypothetical protein NCAS_0H03440 [Naumovozyma castellii CBS 4309]
gi|342303871|emb|CCC71654.1| hypothetical protein NCAS_0H03440 [Naumovozyma castellii CBS 4309]
Length = 681
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 248/650 (38%), Positives = 362/650 (55%), Gaps = 92/650 (14%)
Query: 53 GSTILNLKCVDAQTGLMGKTLLEF--------QSTKGDVLPAHKFGTHDVVVLKP----- 99
G I NL + +TGL GK LE + ++GD+ K G D+VV+KP
Sbjct: 40 GYAITNLNLENVRTGLAGKLYLELGPDQAIDSEISRGDI----KVG--DIVVVKPSISHH 93
Query: 100 -------------------NKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLN----- 135
N ++ GVV +L + IT+ ++ E+
Sbjct: 94 KKHANPKKHGKHNKDNGTDNNEEVTEDVQCSGVVLKLSEQQITITLEESQEQEATKLYAF 153
Query: 136 SPLRLEKLANEVTYRRMKDALIQLSK--GVQNGPAAGLIPVLFGEQKPTVLKKD---IAF 190
+ L L K N +TY+RM+ + +L++ GV P ++ L E +P + + + I F
Sbjct: 154 NRLHLLKTTNTITYKRMESTMRKLAEFDGV---PNNKIVQYLLNE-RPFIKQTNSDKITF 209
Query: 191 KPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASN 250
N NL+ SQ DAI AL++ ++ ++HGPPGTGKT T++E+I Q V +G ++L C SN
Sbjct: 210 N--NPNLNKSQTDAIKFALAN-DISIIHGPPGTGKTYTLIELIQQLVAKGQRVLVCGPSN 266
Query: 251 IAVDNIVERL---VPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKA 307
I+VD I+ERL +P + L+R+GHPARLL L +LD GD ++ DI ++
Sbjct: 267 ISVDTILERLSKALPGNL-LLRIGHPARLLESNLSHSLDILSRSGDAGAIVKDIYHDIDK 325
Query: 308 LNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKL-- 365
+ K K R+E ++++ L KE R R++ V D+I A VV+ TL G+ SR+L
Sbjct: 326 TISDIKKIKSWKDRKEAWRDVKELRKELRVREKKVVNDLILEAKVVVATLHGSSSRELCR 385
Query: 366 --DNTS--FDLVIIDEAAQALEIACWIALLKG-----SRCILAGDHLQLPPTVQSVEAEK 416
D FD +IIDE +Q+LE CWI L+ S+ +LAGD+ QLPPT+++ E +K
Sbjct: 386 IYDQVPHLFDTLIIDEVSQSLEPQCWIPLISHYKSDISKLVLAGDNKQLPPTIKT-EDDK 444
Query: 417 KG---LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS------ 467
K LG TLF+RL YGD +L VQYRM+E IM +SS+++Y+ K+ A S
Sbjct: 445 KTQLILGTTLFDRLVKHYGDSFKQLLNVQYRMNEDIMEFSSQEMYDGKLLADASVATNVL 504
Query: 468 ----GVKRTSSTEPTLLLIDIAGCDMEEKKDEED----STMNEGEAEVAMAHAKRLIQSG 519
GV+ T L+ D G D E ++++ S NE EA + H +LI+S
Sbjct: 505 TDLPGVENNDDTTVPLIWYDTQGDDYIETAEQDEGIISSKFNENEALLVKHHVIKLIESN 564
Query: 520 VHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKE 579
V + IGII+PY+AQV L+K L +D L +E+STVDGFQGREKE II+S+VRSN K E
Sbjct: 565 VPQTAIGIISPYSAQVSLIKKLIREDYPL--IEISTVDGFQGREKEVIILSLVRSNDKFE 622
Query: 580 VGFLSDRRRMNVAVTRARRQCCLVCDTETV--SSDGFLKRLIEYFEEHAE 627
VGFL D RR+NVA+TR ++Q C+V + E + S FLK E+ E ++E
Sbjct: 623 VGFLKDERRLNVAMTRPKKQLCVVGNIECLERSRVKFLKNWAEWSETNSE 672
>gi|392590481|gb|EIW79810.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 775
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 259/774 (33%), Positives = 384/774 (49%), Gaps = 161/774 (20%)
Query: 6 TKEKQSAVSLQEFVSVMAPLIDLEKEAEISAS---ITSGASRNLDTAQKKGSTILNLKCV 62
+ E + L F+ L+ LE++AEI S +T+ + + L +++G + L
Sbjct: 4 SHEPTTDAQLHAFIDRQRALLQLERDAEIERSSLLLTNCSPKLL---EQRGLALGALGTA 60
Query: 63 DAQTGLMGKTLLEFQSTKG----DVLPAHKFGTHDVVVLKPNKADLGSPALG-------- 110
GL GKTL+E + V P H F D+ ++ N A G
Sbjct: 61 SVGVGLGGKTLVELERPSAWHTDAVFPPHSFRPGDIARIEENAAGSGGKKAPKGKKTGAG 120
Query: 111 -------------QGVVYRLKDSSITVAFD---------DIPEEGLNSPLRLEKLANEVT 148
+GVVY++ D+ I +A D +IPE R+ KLAN VT
Sbjct: 121 GGTGGGEKSMKAIEGVVYKVTDTRIVIALDPSETSSEDAEIPECA-----RVVKLANSVT 175
Query: 149 YRRMKDALIQLSK-GVQNG---------PAAGLIPVLFG---EQKPTVLKKDIAFKPFNS 195
Y RM + QL K G+ + P L VL G +P+ + + ++
Sbjct: 176 YDRMDKTIDQLEKTGLPSTRKADDKSSYPLTALTRVLLGISPRSEPSSPARVEEIQFYDP 235
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQ-------------------- 235
+L+ SQK+A+ ALS+ V +HGPPGTGKT T++EII Q
Sbjct: 236 SLNASQKEAVRFALSAGEVACIHGPPGTGKTHTLIEIIRQLASPPSSSTSLTSTGTPSNP 295
Query: 236 ---EVKRGSKILACAASNIAVDNIVERLVP-----------HRVRLVRLGHPARLLPQ-- 279
+ K+ +IL C ASN+AVDNI+ERL+ ++ R+GHPAR++
Sbjct: 296 NQDQEKKPKRILVCGASNLAVDNILERLLALPAPTSSAAAPAKLTATRIGHPARVMAHEG 355
Query: 280 VLESALDAQVLRGDNSSLASDIRKEMKA----LNGKL---LKTKDKNT-RREIQKELRTL 331
VLE+ L+ + R D ++LA D++ E++A L+GK K + + RR++ E++ L
Sbjct: 356 VLEATLEVRAGRSDQAALAKDVKAELEATLDVLSGKGKGGAKARPRGAERRKMWDEVKAL 415
Query: 332 SKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL 391
KE R+R+ V V+ + +VL T A R+L N SFD+VIIDEA QA+E CW+ +
Sbjct: 416 RKEYRQREGGVVRAVLGESQIVLATCHSAGGRQLRNHSFDVVIIDEATQAMEAVCWVPIF 475
Query: 392 KGSRCILAGDHLQLPPTVQSVEAEK------------------------KGLGRTLFERL 427
K + ILAGD +QLPPT+ S + K + L TLF+RL
Sbjct: 476 KAQKLILAGDPMQLPPTILSTDKSKVSKKAKDGKVADRKAKRRPGLRPPRSLETTLFDRL 535
Query: 428 ADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEP---------- 477
+YG + +L VQYRMH I + S LY S++K+ S S P
Sbjct: 536 ERMYGPGIKRLLNVQYRMHAQICAFPSATLYASRLKSAESVSAHLLSDLPGTRAWQAASD 595
Query: 478 ----------TLLLIDIAGCDMEEKKD-------------EEDSTMNEGEAEVAMAHAKR 514
++ D AGC+ E+ + EE S NE EA V +R
Sbjct: 596 AESIKEVLGTPIVFFDTAGCEFYERLEGSGDNDTKGGGGAEEGSKCNENEAGVVKRWVER 655
Query: 515 LIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRS 574
L+++GV S I +ITPY AQV LL L ++ +E+ TVDG QGREKEA++IS+VRS
Sbjct: 656 LVEAGVLPSQIAVITPYQAQVTLLTSLL-RETYGPELEIGTVDGMQGREKEAVVISLVRS 714
Query: 575 NSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE 627
N K+EVGFL ++RR+NVA+TRA+R C+V D++TV G +LK+ + + E +A+
Sbjct: 715 NEKREVGFLKEKRRLNVAMTRAKRHLCVVGDSDTVQHGGPYLKKWLTWLEANAD 768
>gi|294877934|ref|XP_002768200.1| DNA-binding protein SMUBP-2, putative [Perkinsus marinus ATCC
50983]
gi|239870397|gb|EER00918.1| DNA-binding protein SMUBP-2, putative [Perkinsus marinus ATCC
50983]
Length = 970
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 249/670 (37%), Positives = 369/670 (55%), Gaps = 62/670 (9%)
Query: 12 AVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGK 71
A++++ FV + L+ +E++ E++ + S + Q +G +L L TG G+
Sbjct: 9 AMTVESFVELQRKLLVMERDEEVAQTTEVLRSYSNADLQDRGIVLLKLLLDTVSTGPYGR 68
Query: 72 TLLEF--QSTKGD---VLPAHKFGTHDVVV---LKPNKADLGSPALGQGVVYRLKDSSIT 123
LL F + +GD LP ++F + D+V L ++ G P + GVV+ + S+
Sbjct: 69 ALLTFGKPAGRGDQRSPLPPNRFSSGDIVGVFGLSSHQGFSGEPEVA-GVVHSVGQYSVV 127
Query: 124 VAFDD--IPEEGL----NSP-LRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLF 176
V DD + +GL +P L + ++VTY+R+ L +L K N ++ F
Sbjct: 128 VVADDAELDTDGLRVGGGAPSYSLALMGSDVTYKRLSSMLGKLEKTKNNE----IVSCCF 183
Query: 177 GEQK-PTV---LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEI 232
GE P++ ++++I F NL+ Q+ A+ L + + ++HGPPGTGKTT +V
Sbjct: 184 GESPIPSLNPRVQEEIPLA-FGDNLNEVQRRAVRTCLDASPLALVHGPPGTGKTTVLVSY 242
Query: 233 ILQEVKRGSKILACAASNIAVDNIVERL--VPHRVRLVRLGHPARLLPQVLESALDAQVL 290
IL+ ++R K+L CA SN+AVDN++ER+ V +VR+GHPAR+ + LDA++
Sbjct: 243 ILEAIQRHQKLLVCAPSNVAVDNLLERVTAVGGISNVVRIGHPARVEKGLERYTLDAKLA 302
Query: 291 RGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNA 350
+ D L DIRKE+ + K K KD+ RR +Q E+R L KE R R++ AV++VI+ +
Sbjct: 303 QNDQQQLVGDIRKEIDSCLKKSKKAKDRGARRAMQGEVRELRKELRSRERRAVSEVIQQS 362
Query: 351 DVVLTTLTGA----VSRKLDNTS-------FDLVIIDEAAQALEIACWIALLKGSRCILA 399
VV +T A ++R L+N FD+V+IDEAAQA+E ACWI LL G + +LA
Sbjct: 363 SVVFSTCAAAGGRTLARALENGCGDASTRLFDVVVIDEAAQAIEAACWIPLLLGRKAVLA 422
Query: 400 GDHLQLPPTVQSVEAEKKGLGRTLFERLADLY-------GDEVTS-MLTVQYRMHEHIMN 451
GDH QL TV S EA K GL TLF RL ++ G E+ S MLT QYRM+E IM
Sbjct: 423 GDHKQLAATVLSEEAAKGGLQETLFGRLMEMMEKSTIGEGREMPSVMLTTQYRMNETIMG 482
Query: 452 WSSKQLYNSKIKAHPSGVKRTSSTEPT-------------LLLIDIAGCDMEEKK-DEED 497
WS+ Q Y + A S VK + E T LL ID A M E + EE+
Sbjct: 483 WSNAQFYGGHLLASES-VKSRTLQELTERIWADQEMLSRPLLWIDTAVDWMHEDEVGEEE 541
Query: 498 STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK-ILRSKDDKLKNMEVSTV 556
S N E + + L +G+ +I+PY QV L++ L+S + VS+V
Sbjct: 542 SRSNSAEVALVAKYISFLRAAGIKRDQTAVISPYNRQVGLIRDALKSSTGETDASFVSSV 601
Query: 557 DGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLK 616
D +QG+E+E +++S+VRSN EVGFL D RR+NVAVTRA+RQ LV D+ET+ +D L
Sbjct: 602 DSYQGQEQEVVVLSLVRSNDAGEVGFLKDYRRLNVAVTRAKRQLVLVGDSETIGADDVLV 661
Query: 617 RLIEYFEEHA 626
L Y E
Sbjct: 662 TLYSYAAERG 671
>gi|241713544|ref|XP_002412098.1| DNA-binding protein Smubp-2, putative [Ixodes scapularis]
gi|215505175|gb|EEC14669.1| DNA-binding protein Smubp-2, putative [Ixodes scapularis]
Length = 593
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 225/554 (40%), Positives = 306/554 (55%), Gaps = 91/554 (16%)
Query: 102 ADLGSPALGQGVVYRLKDSSITVAFD---DIPEEGLNSPLRLEKLANEVTYRRMKDALIQ 158
+D G + GVV + + +TVAFD D + L KLAN+VTYRR++ L +
Sbjct: 11 SDPGREVVCSGVVSNVSQTDVTVAFDEGRDALDGDDGRTFHLLKLANDVTYRRLRRTLEK 70
Query: 159 LSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKP---FNSNLDHSQKDAISKALSSKNVF 215
LSK + + L+ VLFG P + + P +N NLD SQ++A+ +L + +
Sbjct: 71 LSKD-KEVRYSSLVEVLFGTSTPGENAESSSTPPLDFYNDNLDDSQREAVRFSLRQRELA 129
Query: 216 MLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPAR 275
++HGPPGTGKTTT+VE+I Q K+G+K + A+ N A D +
Sbjct: 130 VIHGPPGTGKTTTLVEVIQQCAKQGAK--SAASKNKAKDAYYK----------------- 170
Query: 276 LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEE 335
++ L S++RKE+K E
Sbjct: 171 -----VQGKL-------------SELRKELK----------------------------E 184
Query: 336 RKRQQLAVTDVIKNADVVLTTLTGAVS----RKLDNTSFDLVIIDEAAQALEIACWIALL 391
R+R+ A+ V+ NADVVL+TLT A R L + F++ ++DE +QALE ACW+ALL
Sbjct: 185 RERK--AMGRVLTNADVVLSTLTSASDDGPLRNLPRSHFEVAVVDECSQALEAACWMALL 242
Query: 392 KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN 451
+ +CILAGDHLQLPPT+ S A K+GL TL ER LYGD + ML +QYRMH IM
Sbjct: 243 RAPKCILAGDHLQLPPTIVSETAAKEGLAVTLMERALILYGDSIKRMLNMQYRMHGAIMK 302
Query: 452 WSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEED-STM 500
WSS +LY ++ AH S GV+ T LLLID A C M E +D S
Sbjct: 303 WSSNRLYEGRLVAHSSVASHLLRDLPGVEDNDDTATPLLLIDTASCSMTELDTPDDESKG 362
Query: 501 NEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQ 560
NEGEA++ H +RLI SGV AS I +I+PY QV L+++ S + +EV +VDGFQ
Sbjct: 363 NEGEADLVAIHVERLISSGVDASSIAVISPYNLQVELIRLRLSS--RHPGLEVRSVDGFQ 420
Query: 561 GREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
GREKEA+++S+VRSN VGFL++ RR+NVAVTRARR ++CDT TVS FLK L++
Sbjct: 421 GREKEAVVMSLVRSNDAGNVGFLAEDRRINVAVTRARRHVAVICDTVTVSRHDFLKSLVD 480
Query: 621 YFEEHAEYLSGSEY 634
Y E S EY
Sbjct: 481 YLSSEGEVRSAREY 494
>gi|449451781|ref|XP_004143639.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
gi|449527761|ref|XP_004170878.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
Length = 957
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 257/699 (36%), Positives = 387/699 (55%), Gaps = 80/699 (11%)
Query: 1 MEGRKTKEKQSAVSLQEFVSVMAPLIDLEKEAEI-----------SASITSGASRNLD-- 47
M+ +K K Q+ + EF + M+ L+ +E+++E+ + +S S+ ++
Sbjct: 248 MDLKKAKAIQNRID--EFANRMSELLRIERDSELEFTQEELNAVPTPDESSDNSKPIEFL 305
Query: 48 -----TAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLK-PNK 101
Q+ TI NL V TGL G L+ F+ LP D+V ++ +
Sbjct: 306 VSHGQAQQELCDTICNLNAVSTSTGLGGMHLVLFRVEGSHRLPPTTLSPGDMVCVRVCDS 365
Query: 102 ADLGSPALGQGVVYRLKD--SSITVAFDDIPEEGLNSPL--------RLEKLANEVTYRR 151
G+ + QG V L D SITVA + + S L R+ LA+ +TY R
Sbjct: 366 RGAGATSCMQGFVNNLGDDGCSITVALESRHGDPTFSKLFGKTVRIDRIPGLADTLTYER 425
Query: 152 MKDALIQLSKGV--QNGPAAGLIPVLFGEQKPTVLKKD---IAFKP-------FNSNLDH 199
+AL+ L K + P+ ++ LFG+++ +D I FN + D
Sbjct: 426 NCEALMLLQKNGLHKKNPSIAVVATLFGDKEDIKWMEDNNLIGLADTNLDGIVFNGDFDD 485
Query: 200 SQKDAISKALSSKN-VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVE 258
SQK AIS+AL+ K + ++ GPPGTGKT + E+I V++G ++L A +N AVDN+VE
Sbjct: 486 SQKSAISRALNKKRPILIIQGPPGTGKTGLLKELIALAVQQGERVLVTAPTNAAVDNMVE 545
Query: 259 RLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT-KD 317
+L + +VR+G+PAR+ V +L A+++ + SS +DI ++ L L + KD
Sbjct: 546 KLSNIGINIVRVGNPARISSSVASKSL-AEIVNSELSSFRTDIERKKADLRKDLRQCLKD 604
Query: 318 KNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS---RKLDNTSFDLVI 374
+ I++ L+ L K +K+++ V +V+ NA VVL T TGA RKL+ FDLV+
Sbjct: 605 DSLAAGIRQLLKQLGKSLKKKEKETVKEVLSNAQVVLATNTGAADPLIRKLEK--FDLVV 662
Query: 375 IDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDE 434
IDEA QA+E ACWI +L+G RCILAGD QL P + S +A + GLG +L ER A L+
Sbjct: 663 IDEAGQAIEPACWIPILQGRRCILAGDQCQLAPVILSRKALEGGLGVSLLERAATLHEGA 722
Query: 435 VTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDI 484
+T+MLT+QYRM++ I +W+SK++Y+ +++ P+ VK T T+ LLL+D
Sbjct: 723 LTTMLTIQYRMNDAIASWASKEMYDGILESSPTVSSHLLVNSPFVKPTWITQCPLLLLDT 782
Query: 485 --------AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVV 536
GC+ S NEGEA++ + H LI SGV I + +PY AQV
Sbjct: 783 RMPYGSLSVGCEEHLDPAGTGSLYNEGEADIVVQHVCSLIYSGVSPRAIAVQSPYVAQV- 841
Query: 537 LLKILRSKDDKLK---NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAV 593
++LR++ D++ +EV+T+D FQGRE +A+IISMVRSN+ VGFL D RRMNVA+
Sbjct: 842 --QLLRNRLDEIPESAGIEVATIDSFQGREADAVIISMVRSNNLGAVGFLGDSRRMNVAI 899
Query: 594 TRARRQCCLVCDTETVSSDGFLKRL---IEYFE--EHAE 627
TRAR+ LVCD+ T+ + FL RL I YF +HAE
Sbjct: 900 TRARKHVALVCDSSTICQNTFLARLLRHIRYFGRVKHAE 938
>gi|268324732|emb|CBH38320.1| putative ATP-dependent helicase [uncultured archaeon]
Length = 658
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 237/670 (35%), Positives = 362/670 (54%), Gaps = 78/670 (11%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQK--KGSTILNLKCVDAQTGLMGKTLL 74
+++ L++LE+E ++ + R L ++ +G L +K GL GK L+
Sbjct: 5 KYIGHFTELVELEREEQMR--LHEEEMRRLSGREREDRGRAFLMMKGKSQDLGLGGKHLV 62
Query: 75 EF-QSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEG 133
+F + T G LP + D+V++ +K L G V +IT+AFD+ P
Sbjct: 63 KFRKQTAGTTLPESEIEVGDLVLI--SKTSLWDEDNPLGTVAEKTSYAITIAFDNAPPGF 120
Query: 134 L-NSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPV-----LFGEQKPTVLKKD 187
+ LR++ N++T++RM +AL Q + +P L G P + D
Sbjct: 121 VYRKDLRIDLFVNDITFQRMIEALKQFKR----------LPRWRKDKLLGNTAPAFTQVD 170
Query: 188 -IAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILAC 246
I F FNS L+ SQ++A+ ++L++++ F++HGPPGTGKT T VE+I Q +KRG+KIL
Sbjct: 171 KIEF--FNSKLNKSQQEAVIRSLAARDFFLIHGPPGTGKTITCVEVIAQLIKRGNKILTA 228
Query: 247 AASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALD-----------AQVLRGDNS 295
A SN+AVDN+VERL V +VR+GHPAR++P + +LD AQ R
Sbjct: 229 ADSNVAVDNLVERLDRIGVNVVRIGHPARIIPALRRRSLDYLVQDEPDYRKAQEFRKRAY 288
Query: 296 SLASDIRK----EMKALNG------KLLKTKDKNTRR-------------EIQKELRTLS 332
L D+++ EM+ G LL ++ TR +++ EL L
Sbjct: 289 ELKEDMKRYIMPEMRWRRGLSDEEIMLLASEGATTRGIPLKKIEGMKKWLDLKHELDRLF 348
Query: 333 KEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLK 392
+ R+ ++ A+ +IK A V+ TT + A S L FD +IDEA Q+ E + IA+LK
Sbjct: 349 GDARELEERAIRRIIKAAAVICTTNSTAGSEILKGEKFDFAVIDEATQSTEPSALIAVLK 408
Query: 393 GSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNW 452
R I+AGDH QLPPTV + EA + ++LFERL L+GD++ ML VQYRM+E I +
Sbjct: 409 AKRFIMAGDHKQLPPTVLNEEAACRSFTKSLFERLLALHGDKIRVMLDVQYRMNEEIAEF 468
Query: 453 SSKQLYNSKIKAH------------PSGVKRTSSTEPTLLLIDIAG-CDMEEK-KDEEDS 498
+ + Y+ K+KA P V S L ID G ++EE+ + S
Sbjct: 469 PNWEFYDGKLKADEQVKRRTLMDILPESVDEESEDVKPFLFIDTGGNAELEERVRKGSTS 528
Query: 499 TMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDG 558
N GEA + A+RL+ G+ DI +I+PY QVV +K + ++ +E+ TVDG
Sbjct: 529 RENPGEARLVKDVAERLLNRGIRPEDIAVISPYDDQVVHIKRMLH----VEGLEIKTVDG 584
Query: 559 FQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRL 618
FQGREKE +I+S VRSN + +GFL D RR+NV++TRA+R+ L+ D+ T+ S+G +RL
Sbjct: 585 FQGREKEVVIVSFVRSNKSRTIGFLKDLRRLNVSITRAKRKLVLIGDSNTLESEGCYRRL 644
Query: 619 IEYFEEHAEY 628
+ +E Y
Sbjct: 645 VALAKESGAY 654
>gi|220931020|ref|YP_002507928.1| putative DNA helicase [Halothermothrix orenii H 168]
gi|219992330|gb|ACL68933.1| putative DNA helicase [Halothermothrix orenii H 168]
Length = 754
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 232/689 (33%), Positives = 377/689 (54%), Gaps = 76/689 (11%)
Query: 4 RKTKEKQSAVSLQEFVSVMAPLIDLEKEAE-----ISASITSGASRNLDTAQKKGSTILN 58
R+ K + + +V+ L++LE++ E I SG R QK G IL+
Sbjct: 79 RREKNHRYTKKVSNYVNKFKELVELERKEEMERHEIEIKRLSGEER-----QKNGRAILH 133
Query: 59 LKCVDAQTGLMGKTLLEF-QSTKGDVLPAHKFGTHDVVVL-KPNKADLGSPALGQGVVYR 116
L+ D TGL K +++F + +G+ LP + D+V++ K N D +P V
Sbjct: 134 LRGRDEGTGLGNKYIVKFVRQWQGEKLPETEIKVGDLVMISKHNPLDSSNPT---ATVVE 190
Query: 117 LKDSSITVAFDDIPEEGL-NSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVL 175
+ SITV FD P + LR++ N++T++RM AL Q+ + G + +L
Sbjct: 191 KTNYSITVVFDKKPPSFIYKKGLRMDLYVNDITFQRMLSALDQIRRA--KGNLGRIRNIL 248
Query: 176 FGEQKPTVLKKDIAFKPF-NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIIL 234
G +KP +++ + N +L+ SQK+A+ KA+ +++++++ GPPGTGKT T VE++
Sbjct: 249 LGIKKPGWYRREPEIIEWVNDDLNLSQKNAVKKAIQARDIYLIQGPPGTGKTVTAVEVVN 308
Query: 235 QEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRG-- 292
Q VK G ++LA A SN+AVDN+VERLV + + ++R+GHP R+ P + E LD +VL
Sbjct: 309 QAVKSGKRVLATAESNVAVDNLVERLVGYGLNVIRVGHPFRVTPLLREHTLDYRVLDHPL 368
Query: 293 -----DNSSLASDIRKEMKAL---NGKLLK-TKDK----NTRRE---------------- 323
+ ASD++++ + L +G+ + DK N R+
Sbjct: 369 YKKALNLREKASDLKEKQEGLTSPSGQWRRGMSDKQIRINARKNRSFRGVPAKRIKEMAK 428
Query: 324 ---IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQ 380
IQ+E+ L + ++ AV D++ +ADVV +T + A S L+ F+LV+IDEA Q
Sbjct: 429 WLGIQEEINQLFDKINSLEERAVRDLLNSADVVCSTNSTAGSELLEGWEFELVVIDEATQ 488
Query: 381 ALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLT 440
A E I L+K + +L GDH QLPPTV S +A+K+GL ++LFERL LYGD+ S+L
Sbjct: 489 ATEPGALIPLIKAQKAVLIGDHKQLPPTVLSQKADKQGLSKSLFERLYSLYGDKYCSLLE 548
Query: 441 VQYRMHEHIMNWSSKQLYNSKIKAHPS---------GV---------KRTSSTEPTLLLI 482
+QYRM++ IM +S+ Y ++K+ P G+ ++ + ++ +
Sbjct: 549 IQYRMNDLIMEFSNSHFYGGRLKSAPEVRNHTLRDLGIEISEGKCFTEKGFDPDNPVVFL 608
Query: 483 DIAGCDMEEKK-DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL 541
D + + E+ DS N EAE+ + ++ G+ I +ITPY QV LL L
Sbjct: 609 DTSNMEARERSLPNSDSYDNPVEAEIVLDLVGEALKLGLEQRHIAVITPYKDQVDLLNHL 668
Query: 542 RSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
+ +N+E++TVDGFQGREKE ++IS+VRSN + +GFL D RR+NVA+TR +R+
Sbjct: 669 ----SRFENLEINTVDGFQGREKEVVMISLVRSNKHRNIGFLRDLRRLNVAITRPKRKLI 724
Query: 602 LVCDTETVSSDGFLKRLIEYFEEHAEYLS 630
++ D+ T+S L++Y E+ + +
Sbjct: 725 IIGDSNTISGHEVYSSLVDYVRENGLFYT 753
>gi|383458482|ref|YP_005372471.1| putative DNA helicase [Corallococcus coralloides DSM 2259]
gi|380730970|gb|AFE06972.1| putative DNA helicase [Corallococcus coralloides DSM 2259]
Length = 653
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 236/641 (36%), Positives = 351/641 (54%), Gaps = 36/641 (5%)
Query: 18 FVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQ 77
F + L+ E+EAE + + L +++G ++L+L+ V+ + GL G+ LL
Sbjct: 19 FFDRLGSLLAQEREAEKARMTSLAQGLTLREREEQGLSVLDLETVEEEVGLGGRILLTLA 78
Query: 78 STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIP----EEG 133
LP + D+V + P +A++ PA + +V R + I +AFD P EG
Sbjct: 79 RADRGRLPT-RVSNGDLVAVLPRRAEVKDPA--KALVSRATSTRIQLAFDREPPAYLSEG 135
Query: 134 LNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK-KDIAFKP 192
L LRL+ + N+VTY R++ A +Q K + G VL G + P KD F P
Sbjct: 136 L---LRLDVVPNDVTYERVR-AGLQRVKAMDKGQERHKREVLLGNEPPRFDNTKD--FTP 189
Query: 193 FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIA 252
L+ Q+DA +AL++++ F++HGPPGTGK+T + E+ Q V RG ++L AASN A
Sbjct: 190 -TRPLNPEQQDAAMRALAAEDFFLVHGPPGTGKSTVLAEVAAQAVARGERLLCTAASNAA 248
Query: 253 VDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKL 312
VD+++E + +R +R+GHPAR+ ++ E LD V + ++ D+ E L G
Sbjct: 249 VDHLLELCLEQGLRAIRVGHPARVAARLQEHTLDIVVEEHPDRVVSRDLFDEAFDLFGYA 308
Query: 313 LKTKDK-------NTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKL 365
+ + + + R E + L E RK ++ AV V+ ADVV TL S L
Sbjct: 309 RRQRSQGRSRERFSNARSSTAEAKDLMDEARKLEKKAVKAVLARADVVCVTLASLGSGVL 368
Query: 366 DNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFE 425
FD ++DEA QA E + L+ + +LAGD QLPPTV S EA K GLG +LFE
Sbjct: 369 AGEEFDRALLDEATQATEPLALLGFLRAPKVVLAGDPQQLPPTVLSQEAAKAGLGTSLFE 428
Query: 426 RLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST---------- 475
RL +GDEV ML QYRM+ IM + SK++Y +++AHPS RT S+
Sbjct: 429 RLLQDHGDEVKRMLREQYRMNAAIMAFPSKEMYGGELRAHPSVADRTLSSVLDSGSGAEV 488
Query: 476 -EPTLLLIDIAGCDM-EEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAA 533
P +L +D AG EE + S +N GEA +A ++L+ G+ ++ +I PY+A
Sbjct: 489 DAPPVLYLDTAGKGFDEEVEPTTHSLLNPGEATYVIARVRQLLSLGLAPREVAVIAPYSA 548
Query: 534 QVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAV 593
Q L+ + + +EV TVD FQGREK+AI++SM RSNS+ ++GFL+D RRMNVA+
Sbjct: 549 QARHLR--EALEAVHPEVEVDTVDAFQGREKDAILVSMTRSNSEGQLGFLNDLRRMNVAL 606
Query: 594 TRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
TRARR +V D+ T+SS F R IE + Y S E+
Sbjct: 607 TRARRHLFVVGDSATLSSHPFYARFIEGTQTDGGYRSAWEW 647
>gi|242048802|ref|XP_002462147.1| hypothetical protein SORBIDRAFT_02g020475 [Sorghum bicolor]
gi|241925524|gb|EER98668.1| hypothetical protein SORBIDRAFT_02g020475 [Sorghum bicolor]
Length = 862
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 243/682 (35%), Positives = 370/682 (54%), Gaps = 70/682 (10%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITS-----GASRNLD--------------TAQKKGST 55
+ EFV M L+ LE++AE+ + T+ AS +D AQ++ T
Sbjct: 163 IDEFVQKMTGLLQLERDAELDVTQTTQDELMSASSMMDGKSKKPVEYLVTHGQAQEECDT 222
Query: 56 ILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKP--NKADLGSPALGQGV 113
I NLK + + TGL G+ L+ F+ LP + D+V ++ ++ ++ + + +
Sbjct: 223 ICNLKVISSSTGLTGQHLVLFRVEGSQKLPPTRLSPGDMVCVRTCNSQGEVATTSCMEAF 282
Query: 114 VYRLKD--SSITVAFDDIPEEGLNSPL--------RLEKLANEVTYRRMKDALIQLSK-G 162
V+ L + SITVA + S R++ LA+ VTY R +AL+ L K G
Sbjct: 283 VHNLGEDGCSITVALKSRRSDPTFSKFLGKIARIDRIQALADAVTYERNCEALMILQKRG 342
Query: 163 VQNGPAA-GLIPVLFGEQKPTV--------------LKKDIAFKPFNSNLDHSQKDAISK 207
+Q A+ G++ LFG+++ + + D + + + D SQ A++
Sbjct: 343 LQKRNASIGVVATLFGDKEDVMKLEGNNLMDCGGSEVPDDGLLERHSYSFDTSQSRALAL 402
Query: 208 ALS-SKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVR 266
AL + V ++ GPPGTGKT + +I +RG ++L A SN A+DNIVE L ++
Sbjct: 403 ALDKERPVLVIQGPPGTGKTRLLSYLITCVARRGERVLVTAPSNAAIDNIVESLSRSGLK 462
Query: 267 LVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT--KDKNTRREI 324
+VR+G+P+R+ P V +L +++ + ++ AL L + D + I
Sbjct: 463 IVRVGNPSRISPSVTSMSL-GEIVTKRLEKFTQEFERKKYALRKDLKRCIQDDDSLASGI 521
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS-FDLVIIDEAAQALE 383
++ L+ L K+ +K ++ A+ +V+ NA+VVL+T TGA + FDLVIIDEA QA E
Sbjct: 522 RQRLKKLGKDYKKEEKEAIREVLSNAEVVLSTNTGAADPLIRGMGCFDLVIIDEAGQATE 581
Query: 384 IACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQY 443
+CWI +L+G RCILAGDH QL P + S EA + GLG +L ER + L+ +T+ LT QY
Sbjct: 582 PSCWIPILQGKRCILAGDHRQLAPVILSREAMEGGLGISLLERASSLHDGLLTTTLTTQY 641
Query: 444 RMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDI------AGC 487
RMHE I +W+SK++Y+ +++ P VK T T+ LLL+D
Sbjct: 642 RMHESIASWASKEMYDGLLQSFPPVASRLLVDYPFVKATWMTQCALLLLDTRKEYGSLNI 701
Query: 488 DMEEKKD--EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKD 545
D EE D S N GEA++ H LIQ GV + I + +PY AQV LL+ +
Sbjct: 702 DCEESLDLAGTGSFYNNGEADIVAQHVFNLIQCGVPPTSIVVQSPYIAQVQLLRGRLEEY 761
Query: 546 DKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCD 605
N+EVST+D FQGRE +A++ISMVRSNS VGFL D RRMNVA+TRAR +VCD
Sbjct: 762 PVASNVEVSTIDSFQGREADAVVISMVRSNSLGAVGFLGDIRRMNVAITRARSHVAVVCD 821
Query: 606 TETVSSDGFLKRLIEYFEEHAE 627
T T+ ++ FL RL+ + +H +
Sbjct: 822 TSTICNNAFLARLLRHIRQHGQ 843
>gi|115478052|ref|NP_001062621.1| Os09g0130800 [Oryza sativa Japonica Group]
gi|113630854|dbj|BAF24535.1| Os09g0130800 [Oryza sativa Japonica Group]
gi|215694894|dbj|BAG90085.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641090|gb|EEE69222.1| hypothetical protein OsJ_28445 [Oryza sativa Japonica Group]
Length = 981
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 244/698 (34%), Positives = 373/698 (53%), Gaps = 86/698 (12%)
Query: 5 KTKEKQSAVSLQEFVSVMAPLIDLEKEAEI--------SASITSGASR-----------N 45
KT+ Q+ + ++FV M+ L+ +E++AE+ + + G S+ +
Sbjct: 269 KTRLMQTKI--EDFVKKMSDLLHIERDAELEFTQEELNATPVMDGNSKKPLKPVEYLVTH 326
Query: 46 LDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKP--NKAD 103
+ Q++ TI NL + + TGL G+ L+ F+ LP D+V ++ N+ +
Sbjct: 327 GQSQQEQCDTICNLNVISSSTGLDGQHLVLFRVKDNHRLPPTTLSPGDMVCIRTCDNRGE 386
Query: 104 LGSPALGQGVVYRLKD--SSITVAFDDIPEEGLNSPL--------RLEKLANEVTYRRMK 153
+ + + QG +Y L + SITV + S L R++ LA+ +TY R
Sbjct: 387 ITTSCM-QGFIYNLGEDGCSITVTLKSRRGDPTFSKLFGKNVRIDRIQALADALTYERNC 445
Query: 154 DALIQLS-KGVQN-GPAAGLIPVLFGEQK--------------PTVLKKDIAFKPFNSNL 197
+AL+ L KG+Q + G++ LFG+++ + + D K +
Sbjct: 446 EALMLLQRKGLQKKNSSIGVVATLFGDKEDMMMMEQNNLADWGESTIHDDELLKKNKYDF 505
Query: 198 DHSQKDAISKALSSKN-VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNI 256
D SQ AI+ L++K V ++ GPPGTGKT + +I V++G ++L A SN AVDN+
Sbjct: 506 DASQLKAITLGLNNKRPVLIIQGPPGTGKTGLLSYLIACAVRKGERVLVTAPSNAAVDNM 565
Query: 257 VERLVPHRVRLVRLGHPARLLPQVLESALDAQVLR------GDNSSLASDIRKEMKALNG 310
VE+L + VR+G+PAR+ P V +L V R + SD+RK++K
Sbjct: 566 VEKLSDTGLDTVRVGNPARISPSVASRSLGELVNRRLQKFTEEFERKKSDLRKDLKHC-- 623
Query: 311 KLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS---RKLDN 367
+D I++ L+ L K +K+++ + +V+ NADVVL+T GA R++
Sbjct: 624 ----IQDDTLAAGIRQLLKQLGKNFKKKEKEIIREVLSNADVVLSTNIGAADPLVRRIG- 678
Query: 368 TSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERL 427
FDLVIIDEA QA+E +CWI +L+G RCILAGD QL P V S EA + GL +L ER
Sbjct: 679 -CFDLVIIDEAGQAIEPSCWIPILQGKRCILAGDQRQLAPVVLSREAMQGGLAMSLLERA 737
Query: 428 ADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEP 477
+ L+ + +T+ LT QYRMH+ I +W+S ++Y+ +K+ PS +K T T
Sbjct: 738 SSLHNELLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVASHLLADYPFIKETWITRC 797
Query: 478 TLLLIDI------AGCDMEEKKDEED--STMNEGEAEVAMAHAKRLIQSGVHASDIGIIT 529
LL+D D EE D S N GEA+V H L+Q GV + I + +
Sbjct: 798 AFLLLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVSQHVLNLVQCGVSPTAIAVQS 857
Query: 530 PYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRM 589
PY AQV LL+ + +EVST+D FQGRE +A++ISMVRSN+ VGFL D RRM
Sbjct: 858 PYIAQVQLLRDRLEDYPEASGVEVSTIDSFQGREADAVVISMVRSNTLGAVGFLGDNRRM 917
Query: 590 NVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAE 627
NVA+TRARR LVCD+ T+ ++ FL RL+ + +H +
Sbjct: 918 NVAITRARRHVALVCDSSTICNNAFLARLLRHIRQHGQ 955
>gi|218201695|gb|EEC84122.1| hypothetical protein OsI_30457 [Oryza sativa Indica Group]
Length = 981
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 245/698 (35%), Positives = 373/698 (53%), Gaps = 86/698 (12%)
Query: 5 KTKEKQSAVSLQEFVSVMAPLIDLEKEAEI--------SASITSGASR-----------N 45
KT+ Q+ + ++FV M+ L+ +E++AE+ + + G S+ +
Sbjct: 269 KTRLMQTKI--EDFVKKMSDLLHIERDAELEFTQEELNATPVMDGNSKKPLKPVEYLVTH 326
Query: 46 LDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKP--NKAD 103
+ Q++ TI NL + + TGL G+ L+ F+ LP D+V ++ N+ +
Sbjct: 327 GQSQQEQCDTICNLNVISSSTGLDGQHLVLFRVKDNHRLPPTTLSPGDMVCIRTCDNRGE 386
Query: 104 LGSPALGQGVVYRLKD--SSITVAFDDIPEEGLNSPL--------RLEKLANEVTYRRMK 153
+ + + QG +Y L + SITV + S L R++ LA+ +TY R
Sbjct: 387 ITTSCM-QGFIYNLGEDGCSITVTLKSRRGDPTFSKLFGKNVRIDRIQALADALTYERNC 445
Query: 154 DALIQLS-KGVQN-GPAAGLIPVLFGEQK--------------PTVLKKDIAFKPFNSNL 197
+AL+ L KG+Q + G++ LFG+++ + + D K +
Sbjct: 446 EALMLLQRKGLQKKNSSIGVVATLFGDKEDMMMMEQNNLADWGESTIHDDELLKKNKYDF 505
Query: 198 DHSQKDAISKALSSKN-VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNI 256
D SQ AI+ L++K V ++ GPPGTGKT + +I V++G ++L A SN AVDN+
Sbjct: 506 DASQLKAITLGLNNKRPVLIIQGPPGTGKTGLLSYLIACAVRKGERVLVTAPSNAAVDNM 565
Query: 257 VERLVPHRVRLVRLGHPARLLPQVLESALDAQVLR------GDNSSLASDIRKEMKALNG 310
VE+L + VR+G+PAR+ P V +L V R + SD+RK++K
Sbjct: 566 VEKLSDTGLDTVRVGNPARISPSVASRSLGELVNRRLQKFTEEFERKKSDLRKDLKHC-- 623
Query: 311 KLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS---RKLDN 367
+D I++ L+ L K +K+++ + +V+ NADVVL+T GA R++
Sbjct: 624 ----IQDDTLAAGIRQLLKQLGKNFKKKEKEIIREVLSNADVVLSTNIGAADPLVRRIG- 678
Query: 368 TSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERL 427
FDLVIIDEA QA+E +CWI +L+G RCILAGD QL P V S EA + GL +L ER
Sbjct: 679 -CFDLVIIDEAGQAIEPSCWIPILQGKRCILAGDQRQLAPVVLSREAMQGGLAMSLLERA 737
Query: 428 ADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGV----------KRTSSTEP 477
+ L+ + +T+ LT QYRMH+ I +W+S ++Y+ +K+ PS V K T T
Sbjct: 738 SSLHNELLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVVSHLLADYPFIKETWITRC 797
Query: 478 TLLLIDI------AGCDMEEKKDEED--STMNEGEAEVAMAHAKRLIQSGVHASDIGIIT 529
LL+D D EE D S N GEA+V H L+Q GV + I + +
Sbjct: 798 AFLLLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVSQHVLNLVQCGVSPTAIAVQS 857
Query: 530 PYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRM 589
PY AQV LL+ + +EVST+D FQGRE +A++ISMVRSN+ VGFL D RRM
Sbjct: 858 PYIAQVQLLRDRLEDYPEASGVEVSTIDSFQGREADAVVISMVRSNTLGAVGFLGDNRRM 917
Query: 590 NVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAE 627
NVA+TRARR LVCD+ T+ ++ FL RL+ + +H +
Sbjct: 918 NVAITRARRHVALVCDSSTICNNAFLARLLRHIRQHGQ 955
>gi|255729912|ref|XP_002549881.1| hypothetical protein CTRG_04178 [Candida tropicalis MYA-3404]
gi|240132950|gb|EER32507.1| hypothetical protein CTRG_04178 [Candida tropicalis MYA-3404]
Length = 705
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 239/647 (36%), Positives = 358/647 (55%), Gaps = 77/647 (11%)
Query: 53 GSTILNLKCVDAQTGLMGKTLLEFQSTKG----DVLPAHKFGTHDVVVLK--------PN 100
G I+NL+ + +TGL GKT+LE Q G D + T D+V L
Sbjct: 70 GLGIINLQIANIRTGLGGKTILELQLDPGFSATDEINTSTLRTGDIVRLSRMSSSKPDKK 129
Query: 101 KADLGSPALGQG---VVYRLKDSSITVAFDDIPEEG-----------LNSPLRLEKLANE 146
G + G VV ++ +I+++ D+ ++ NS + L KLAN
Sbjct: 130 SKKDGEESTSDGIDAVVLKVTTQAISISVDEANDDSKVLQYYNNTNDQNSRMWLVKLANS 189
Query: 147 VTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQK----PTVLKKDIAFKPFNSNLDHSQK 202
+TY+RM L+ + K + +L GE K PT ++ + N L+ SQK
Sbjct: 190 ITYKRM---LMSMDKVNALEDKNDIHRILLGESKYIPKPT---SNLKLEFINDRLNDSQK 243
Query: 203 DAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSKILACAASNIAVDNIVERL- 260
+AI A++ N+ ++HGPPGTGKT T++E+I Q G K+L C SNI+VD I+ERL
Sbjct: 244 EAIDFAINKSNITIIHGPPGTGKTYTLIELIQQLTNNLGEKVLVCGPSNISVDTILERLH 303
Query: 261 --VPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDK 318
+L+R+GHPARLLP L +L+ + + + DI K++++ ++ K K
Sbjct: 304 DKYKKPEKLIRMGHPARLLPGNLAHSLEI-LSKSYGHDVIKDIEKDIQSTLSQIKKCKRY 362
Query: 319 NTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEA 378
R+ + +EL+ L KE ++R++ V ++++ + VV++TL GA S L SFD +IIDE
Sbjct: 363 AERKALYQELKLLRKELKQREKKIVAELLQQSQVVISTLHGAGSFDLKGVSFDTIIIDEV 422
Query: 379 AQALEIACWIALLKGS---RCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA-DLYGDE 434
+Q+LE CWI LL S R ++AGD++QLPPT++ + E LG TLF+RL GD
Sbjct: 423 SQSLEPQCWIPLLLTSNFKRLVIAGDNMQLPPTIKCKKNES-FLGTTLFDRLVKQCDGDS 481
Query: 435 VTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDI 484
+L VQYRM++ IM + S QLY++K+ S GV+ +T + D
Sbjct: 482 FRKLLNVQYRMNQSIMEFPSMQLYDNKLLCDSSVKDISLLDLPGVEDNETTSAKCIWYDT 541
Query: 485 AGCDMEEKKDEE----DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKI 540
G + E+ +E DS NE E V H ++L+ SGV DIGII+PYAAQV LLK
Sbjct: 542 QGGEFPEQINESIEGGDSKYNEMEILVVQGHLQKLLDSGVRPQDIGIISPYAAQVQLLK- 600
Query: 541 LRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
+ +EV TVDGFQGREKE II+S+VRSN +E+GFLS++RR+NVA+TR +R
Sbjct: 601 ----KKVVPEVEVHTVDGFQGREKEVIILSLVRSNDDREIGFLSEQRRLNVAITRPKRHL 656
Query: 601 CLVCDTETVS-----SDGFLKRLIEYFEE-------HAEYLSGSEYL 635
C+V D E ++ S+ FL++ +Y E+ EY + ++YL
Sbjct: 657 CIVGDLELLNQGGQGSNSFLRKWCKYVEDGEGEEPYEIEYPNLTDYL 703
>gi|442323516|ref|YP_007363537.1| DNA helicase [Myxococcus stipitatus DSM 14675]
gi|441491158|gb|AGC47853.1| DNA helicase [Myxococcus stipitatus DSM 14675]
Length = 637
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 231/639 (36%), Positives = 352/639 (55%), Gaps = 34/639 (5%)
Query: 18 FVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQ 77
F + L+ E+EAE + T +L +++G ++L+L+ V+ + GL G+ LL
Sbjct: 7 FFDQLGSLLAKEREAEKARLATLAEGMSLHEREEQGLSVLDLETVEEEVGLGGRVLLTLA 66
Query: 78 STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIP----EEG 133
LP+ + D+V + P +A++ PA + +V R + + +AFD P EG
Sbjct: 67 RADRSRLPS-RLHNGDLVAVLPRRAEVSEPA--KALVSRASATRLQLAFDRSPPPYVHEG 123
Query: 134 LNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPF 193
L LRL+ + N+VTY RM+ L Q K + G VL G + P K F+P
Sbjct: 124 L---LRLDVVPNDVTYERMRTGL-QRVKAMDKGLERRKREVLLGNEPPRT-DKPRDFEP- 177
Query: 194 NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAV 253
L+ Q DA+ +AL++++ F++HGPPGTGK+T + E+ Q V RG ++L AASN AV
Sbjct: 178 GRPLNPEQLDAVGRALAAEDFFLVHGPPGTGKSTVLAEVAAQAVARGQRLLCTAASNAAV 237
Query: 254 DNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
D++++ + +R VR+GHPAR+ ++ E LD V + ++ ++ E +L G
Sbjct: 238 DHLLDLCLGQGLRAVRVGHPARVAARLQEHTLDIVVEEHPDRVVSRELFDEAFSLLGYAR 297
Query: 314 KTKDK-------NTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLD 366
+ + + + R E + + E R ++ AV V+ ADVV TL S L
Sbjct: 298 RQRTQGRSRARFSNARASTTEAKAMLDEARALERKAVRSVLATADVVCVTLASLDSGVLS 357
Query: 367 NTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFER 426
FDL ++DEA QA E + L+ ILAGD QLPPTV S +A + GL +LFER
Sbjct: 358 GEQFDLALLDEATQATEPLALLGFLRAPIVILAGDPQQLPPTVLSQDAARAGLAVSLFER 417
Query: 427 LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT------SSTE---P 477
L +GD V ML QYRM+ IM++ S+++Y +++AHPS RT TE P
Sbjct: 418 LLADHGDGVKRMLLEQYRMNTRIMDFPSREMYGGQLRAHPSVADRTLADVLPPGTEVDAP 477
Query: 478 TLLLIDIAGCDM-EEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVV 536
+L +D AG EE + S N GEA++ A + L+ G+ ++ +ITPY+AQ
Sbjct: 478 PVLFLDTAGKGFDEEVEPTTRSLFNTGEADLIEARVRALLALGLSQRELAVITPYSAQA- 536
Query: 537 LLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
LR + + ++EV T+D FQGREK+A+++S+ RSNS+ +VGFL+D RRMNVA+TR
Sbjct: 537 --HRLRERLESFAPDVEVDTMDAFQGREKDAVLVSLTRSNSEGQVGFLNDLRRMNVALTR 594
Query: 596 ARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
ARR +V D+ T+S F R IE + H Y S E+
Sbjct: 595 ARRHLFVVGDSATLSGHPFYARFIEESQAHGGYRSAWEW 633
>gi|405122411|gb|AFR97178.1| DNA helicase [Cryptococcus neoformans var. grubii H99]
Length = 748
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 249/730 (34%), Positives = 369/730 (50%), Gaps = 121/730 (16%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
SLQ F++ L++LE++AE + + + +++G + L GL GK+L
Sbjct: 15 SLQSFLNRHKQLLELERKAEKEQTRLLNSKCSPSLLEQRGLALNGLGVSGISIGLGGKSL 74
Query: 74 LEFQST----KGDVLPAHKFGTHDVVVLKPNKADLGSPALG-----------QGVVYRLK 118
+E LP H F + D V ++ + A G +GVVYR+
Sbjct: 75 IELHRPLAYHTSPALPPHTFRSGDPVRIEAHVATTSGKNKGKKKESEDEGAVEGVVYRVG 134
Query: 119 DSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSK-----GVQNGPAAGLIP 173
+ VA ++ E L LRL KLAN VT+ RM+ L L + G+ P++ +P
Sbjct: 135 PEKVVVAVNESKEIDLPERLRLLKLANSVTFDRMEKTLAHLERLVLPSGITPSPSSFNMP 194
Query: 174 V---LFGEQKPTV---------------LKKDIAFKPFNSNLDHSQKDAISKALSSKNVF 215
+ L G+Q PT L D K F +L++SQK++I L + +
Sbjct: 195 LVQALLGKQLPTWKETIPPQNDVEALSQLSSDEDMKWFGQHLNNSQKESIKFCLKANEIA 254
Query: 216 MLHGPPGTGKTTTVVEIILQEVKRGS--------KILACAASNIAVDNIVERL------V 261
+HGPPGTGKT T+VE+I Q + R + +IL SN+A+DN++ RL
Sbjct: 255 CIHGPPGTGKTHTLVELIFQLLSRPASPNTTVPPRILITTPSNLALDNLLIRLHILAQQP 314
Query: 262 PH-----RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK----ALNGK- 311
P+ R +R+GHP R+ +++ LD + GD L D+ KE++ AL K
Sbjct: 315 PYSSLLPRNSFLRMGHPTRVHRDLVKETLDWRAANGDQGELLKDVGKEIQGHLDALGKKR 374
Query: 312 ----LLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDN 367
+K K++ + E+R L KE R+R+ V V+ A +VL T A SR+L+N
Sbjct: 375 GEKGAVKGKERGNK---WGEIRELRKEYRQREGKVVKTVVNGAQIVLATCHSAGSRQLNN 431
Query: 368 TSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVE-------------- 413
FD+ IIDEA QA+E CW+ +LK + ILAGD QLPPT+ S E
Sbjct: 432 MVFDVCIIDEATQAVEAVCWVPILKSKKLILAGDPQQLPPTIMSKEDTPPLKDLQEAIDQ 491
Query: 414 ---------AEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKA 464
+ L TLFERL LYG + +L VQYRM+EHI + S+ LY S + +
Sbjct: 492 IKLGDSPSLKSPRTLETTLFERLETLYGPGIKRVLQVQYRMNEHIAVFPSETLYESALIS 551
Query: 465 HPSGVKRT----------------SSTEPTLLLIDIAGCDMEEKKD----------EEDS 498
S KRT EPT++ D A C+ E+ + E S
Sbjct: 552 DASVAKRTLLELPSVKDKTSEDVKDDLEPTVVFFDTADCEFYERTEGDGEAAKSYIGEGS 611
Query: 499 TMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDG 558
NE EAE+ A++LI G+ +IGI+TPY AQV L+ L ++ M + +VDG
Sbjct: 612 KSNENEAEIVARWARKLISLGIPPIEIGIVTPYQAQVTLISSLLH--EEYPEMTIGSVDG 669
Query: 559 FQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS-SDGFLKR 617
QG+E+EAII+S+VRSN +VGFL + RR+NVA+TRA+RQ C+V D++TVS +LK+
Sbjct: 670 LQGQEREAIILSLVRSNPSGDVGFLGEYRRLNVAMTRAKRQLCVVGDSKTVSKGTKYLKK 729
Query: 618 LIEYFEEHAE 627
+++ E A+
Sbjct: 730 WMDWLEAEAD 739
>gi|58271134|ref|XP_572723.1| DNA helicase [Cryptococcus neoformans var. neoformans JEC21]
gi|57228982|gb|AAW45416.1| DNA helicase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 748
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 250/727 (34%), Positives = 363/727 (49%), Gaps = 115/727 (15%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
S+Q F++ L++LE++AE + + + +++G + L GL GK+L
Sbjct: 15 SVQSFLNRHKQLLELERKAEEEQTRLLNSKCSPSLLEQRGLALNGLGVSGISIGLGGKSL 74
Query: 74 LEFQST----KGDVLPAHKFGTHDVVVLKPNKADLGSPALG-----------QGVVYRLK 118
+E LP H F D V ++ + A + G +GVVYR+
Sbjct: 75 IELHRPLAYHTSPALPPHTFRPGDPVRIEAHVATTSGKSKGKKRESEDEGAVEGVVYRVG 134
Query: 119 DSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQL------SKGVQNGPAAG-- 170
+ VA ++ E L LRL KLAN VT+ RM+ L L S G + P+
Sbjct: 135 PEKVVVAVNESKEIDLPERLRLLKLANSVTFDRMEKTLAHLERLVLPSGGTPSPPSFNMP 194
Query: 171 LIPVLFGEQKPTV---------------LKKDIAFKPFNSNLDHSQKDAISKALSSKNVF 215
L+ L G+Q PT L D K F +L+ SQK++I L + V
Sbjct: 195 LVQALLGKQLPTWKETIPPQNNIEPLGQLSSDEDMKWFGQHLNDSQKESIKFCLKANEVA 254
Query: 216 MLHGPPGTGKTTTVVEIILQEVKRGS--------KILACAASNIAVDNIVERL------V 261
+HGPPGTGKT T+VE+I Q + R + +IL SN+A+DN++ RL
Sbjct: 255 CIHGPPGTGKTHTLVELIFQLLSRPAAPNTTLPPRILITTPSNLALDNLLIRLHILAQQP 314
Query: 262 PH-----RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK 316
P+ R +R+GHP R+ +++ LD + GD L D+ KEM+ L K +
Sbjct: 315 PYSSLLPRNSFLRMGHPTRVHRDLVKETLDWKAANGDQGELLKDVGKEMQGHLDALGKKR 374
Query: 317 DKN------TRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
+ R + E+R L KE R+R+ V V+ A +VL T A SR+L+N F
Sbjct: 375 GEKGAVKGKERGKKWGEVRELRKEYRQREGKVVKTVVNGAQIVLATCHSAGSRQLNNMIF 434
Query: 371 DLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVE----------------- 413
D+ IIDEA QA+E CW+ +LK + ILAGD QLPPT+ S E
Sbjct: 435 DVCIIDEATQAVEAVCWVPILKSKKLILAGDPQQLPPTIMSKENAPPLKDLQEAIDQIKL 494
Query: 414 ------AEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS 467
+ L TLFERL LYG + +L VQYRM+EHI + S+ LY S + + S
Sbjct: 495 GDSPSLKSPRTLETTLFERLEKLYGPGIKRVLQVQYRMNEHIAVFPSETLYESALISDAS 554
Query: 468 GVKRT----------------SSTEPTLLLIDIAGCDMEEKKD----------EEDSTMN 501
KRT EPT++ D A C+ E+ + E S N
Sbjct: 555 VAKRTLLELPSVKDKTSEDVKDDLEPTVVFFDTADCEFYERTEGDGEATKSSIGEGSKSN 614
Query: 502 EGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQG 561
E EAE+ A++LI G+ +IGI+TPY AQV L+ L ++ M + +VDG QG
Sbjct: 615 ENEAEIVARWARKLISLGIPPIEIGIVTPYQAQVTLISSLLH--EEYPEMTIGSVDGLQG 672
Query: 562 REKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS-SDGFLKRLIE 620
+E+EAII+S+VRSN EVGFL + RR+NVA+TRA+RQ C+V D++TVS +LK+ ++
Sbjct: 673 QEREAIILSLVRSNPSGEVGFLGEYRRLNVAMTRAKRQLCVVGDSKTVSKGTKYLKKWMD 732
Query: 621 YFEEHAE 627
+ E A+
Sbjct: 733 WLEAEAD 739
>gi|403216944|emb|CCK71439.1| hypothetical protein KNAG_0H00230 [Kazachstania naganishii CBS
8797]
Length = 685
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 249/685 (36%), Positives = 365/685 (53%), Gaps = 86/685 (12%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLE 75
+EF I E+E +++ + ++ +L K G I NL + +TGL G +E
Sbjct: 3 REFAEKYLKAIGYEREQDVAQTARLLSTLSLPQLVKNGLAISNLNLENIRTGLSGDLFME 62
Query: 76 FQSTKG--DVLPAHKFGTHDVVVLKPNKADLG-----------------SPALGQ----- 111
D + D+VV++ A SP G
Sbjct: 63 LAPNHAVNDEIQKSDIKVGDIVVVRAKPASSTKSKKLTRAKKHTSKVQESPDSGTEEDAS 122
Query: 112 --GVVYRLKDSSITVAFDDIPE-EGLN-----SPLRLEKLANEVTYRRMKDALIQLSKGV 163
GVVY++ + + ++ E + N PL + K N +TY+RM+ + +L++
Sbjct: 123 CIGVVYKMTTQQVVLTINEHQEIQATNLLHASKPLYVTKTTNTITYKRMESTMRKLAE-F 181
Query: 164 QNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGT 223
+ P+ ++ +L K K FN L+ SQ+DAI+ ++ ++ + ++HGPPGT
Sbjct: 182 EETPSNRIVQLLLNMTTFIPNKPLTGIKYFNDQLNKSQQDAIAFSMENE-LSIIHGPPGT 240
Query: 224 GKTTTVVEIILQEV-KRGSKILACAASNIAVDNIVERLVPHRV--RLVRLGHPARLLPQV 280
GKT T+VE+ILQ V + ++L C SNI+VD I+ERL H L+R+GHPARLL
Sbjct: 241 GKTYTLVELILQLVLNKNQRVLVCGPSNISVDTILERLSAHLPGNLLLRIGHPARLLKSN 300
Query: 281 LESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQ 340
L +LD RGDN +L +DI K++ + K K RRE E++TL KE R R++
Sbjct: 301 LLHSLDILTKRGDNGALLNDIYKDIDKTIAGVRKLKSYKDRREAWNEVKTLRKELRARER 360
Query: 341 LAVTDVIKNADVVLTTLTGAVSRKLDNTS------FDLVIIDEAAQALEIACWIALLKG- 393
VTD+I A VV+ TL GA S++L FD VIIDE +Q+LE CWI L+
Sbjct: 361 SIVTDLILEAKVVVATLHGASSKELLKAYDEVPKLFDTVIIDEVSQSLEPQCWIPLISHY 420
Query: 394 ----SRCILAGDHLQLPPTVQSVEAEK--KGLGRTLFERLADLYGDEVTSMLTVQYRMHE 447
S+ +LAGD QLPPTV++ + K K L TLF+RL YG+ L VQYRM+E
Sbjct: 421 KSNISKLVLAGDDKQLPPTVKTEDNAKFQKQLETTLFDRLVKNYGNVFKKFLDVQYRMNE 480
Query: 448 HIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEE---------------- 491
IM + SK +YN K+ AH S T LL+D+ GCD E
Sbjct: 481 TIMEFPSKAMYNGKLLAHDSVA--------TKLLLDLPGCDTAEDTEVAVIWYDTQGDFF 532
Query: 492 -KKDEEDSTM-----NEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK-ILRSK 544
+ ++ DS + NE EA V +H +LI V IGII+PY+AQV L+K ++R
Sbjct: 533 LESEDSDSAVFASKYNENEALVVKSHILKLIGDHVSPECIGIISPYSAQVTLIKGMIR-- 590
Query: 545 DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
+ ++E+STVDGFQGREKE II+S+VRSN K EVGFL + RR+NVA+TR ++Q C+V
Sbjct: 591 -EMYPSIEISTVDGFQGREKEVIILSLVRSNDKFEVGFLQENRRLNVAMTRPKKQLCVVG 649
Query: 605 DTETVSSDG--FLKRLIEYFEEHAE 627
+ E + G +L+ E+ E++A+
Sbjct: 650 NIEMLERCGNKYLRSWGEWAEQNAD 674
>gi|320580709|gb|EFW94931.1| Hexameric DNA polymerase alpha-associated DNA helicase A [Ogataea
parapolymorpha DL-1]
Length = 712
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 245/692 (35%), Positives = 378/692 (54%), Gaps = 97/692 (14%)
Query: 33 EISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF------QSTKGDVLPA 86
+ S I+ + +NL G +LNL + +TG+ GK ++E + +
Sbjct: 26 QTSELISRASPKNLSA---NGLAVLNLSVSNVRTGIGGKQIVELVPHASIAGKENAAIQT 82
Query: 87 HKFGTHDVVVLKPNKADLGSPALGQ------------------GVVYRLKDSSITVA--F 126
F T D+V L +D+ + L GVV + + I +A +
Sbjct: 83 GDFKTGDIVKLDKYSSDVNTKKLRNSSKKKDVEDAEETSVQIDGVVVLVSERQINIALNY 142
Query: 127 DDIPEEGL------------NSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPV 174
D + EG ++ + L ++ NE+TY RM+ + +L + + + A+ L+ +
Sbjct: 143 DSMTAEGAKIEEKVYSLYNSDAKVWLVQVDNEITYNRMESTMRKLGE-LDSDTASELVKL 201
Query: 175 LFGEQ---KPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVE 231
+ G+ P + + FN NL+ SQK+A+ +L S N+ ++HGPPGTGKT+T+VE
Sbjct: 202 VLGKSAFISPNLKYQKTKLNWFNGNLNDSQKNAVQFSLVS-NLSIIHGPPGTGKTSTIVE 260
Query: 232 IILQEVKR-----GSK-ILACAASNIAVDNIVERLVPH-----RVRLVRLGHPARLLPQV 280
++ Q V R GSK IL C SNI++D I+ERL RLVR+GHPAR+LPQ+
Sbjct: 261 LVKQLVLRKRESEGSKRILICGPSNISIDTILERLSSFFSDNKYSRLVRIGHPARMLPQI 320
Query: 281 LESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQ 340
L +LD + ++ + DI +E+ L K+ KTK RRE+ + ++ L K+ R R +
Sbjct: 321 LRHSLDL-ITESESGEILKDILQEINQLTRKIKKTKSYRERRELYQTIKELKKDLRLRSK 379
Query: 341 LAVTDVIKNADVVLTTLTGAVSRKLDNTS------FDLVIIDEAAQALEIACWIALLKGS 394
A +DV+ N++VV TL G+ +R++ N FD +IIDE +QALE +CWI L+
Sbjct: 380 KAYSDVLSNSEVVAATLHGSSAREIVNCIRERGDLFDTIIIDEVSQALEPSCWIPLMYHQ 439
Query: 395 ---RCILAGDHLQLPPTVQSVEAEK--KGLGRTLFERLADLYGD--EVTSMLTVQYRMHE 447
+ ++AGD+ QL PT+++ + K L +TLF+RL +++ + E T L +QYRM++
Sbjct: 440 SLKQLVIAGDNKQLSPTIKTKKNAKVVNTLSKTLFDRLIEVHKNHQEFTCFLDIQYRMNK 499
Query: 448 HIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTL------------LLIDIAGCDMEEKKDE 495
IM++ S LY K+ AH S S P + + D G D E
Sbjct: 500 KIMSFFSDALYGGKLIAHSSVENIKLSDLPYVKSPQDDNVAEEVIWYDTQGGDYPEADSA 559
Query: 496 ED-------STMNEGEAEVAMAHAKRLIQS-GVHASDIGIITPYAAQVV-LLKILRSKDD 546
ED S N+GE V + H + L++ V DIGII+PY+AQV L K+LR + +
Sbjct: 560 EDDSAGLQASRYNDGECLVVLKHVRSLVEDHNVKQEDIGIISPYSAQVSSLRKLLREETE 619
Query: 547 K-LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCD 605
++E+STVDGFQGREKE II+S+VRSN +VGFL+D RRMNV+++RA+RQ C+V D
Sbjct: 620 HPFPDIEISTVDGFQGREKEVIILSLVRSNDSHDVGFLNDYRRMNVSISRAKRQLCVVGD 679
Query: 606 TETVSSDG--FLKRLIEYFEEHAE--YLSGSE 633
ET+S FLK+ E+ EE+A+ Y+ SE
Sbjct: 680 METISESNVVFLKQWCEWCEENADIRYVDVSE 711
>gi|367007328|ref|XP_003688394.1| hypothetical protein TPHA_0N01790 [Tetrapisispora phaffii CBS 4417]
gi|357526702|emb|CCE65960.1| hypothetical protein TPHA_0N01790 [Tetrapisispora phaffii CBS 4417]
Length = 677
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 246/682 (36%), Positives = 379/682 (55%), Gaps = 87/682 (12%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLE 75
+EF + I EKE ++ A T+ S L G I NL + ++GL GK +E
Sbjct: 3 KEFSERLLKNIQHEKEQDVKAIATNLKSLPLQKLVSNGLAINNLALENIRSGLAGKIFVE 62
Query: 76 F--------QSTKGDVLPAHKFGTHDVVVLKPNKA--------------DLGSPALG--- 110
+ +GD+ K G D+V ++P+ + DL + A G
Sbjct: 63 LTVNHAINTEIARGDI----KAG--DIVSIRPSTSGKEKAKSRGKNSFIDLDNSADGIAL 116
Query: 111 --QGVVYRLKDSSITVAFDDIPEEG----LNSP-LRLEKLANEVTYRRMKDALIQLSKGV 163
G VY++ D ++ ++ EE + P L + K N VTY+RM+ L +L +
Sbjct: 117 EIVGTVYKITDQLCSITIEEKDEEDAMKLYSFPKLYIIKTVNTVTYKRMESTLRKLGE-F 175
Query: 164 QNGPAAGLIPVL-----FGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLH 218
+ P +I L F +Q P K DI F N L+ SQKDAI+ A+++ ++ ++H
Sbjct: 176 EGTPNNNIIQYLLQDRQFIKQTP---KSDIEFN--NKALNKSQKDAIAFAMAN-DISIIH 229
Query: 219 GPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERL---VPHRVRLVRLGHPAR 275
GPPGTGKT T++E+I Q V +G ++L C SNIAVD I+ERL +P V L+R+GHPAR
Sbjct: 230 GPPGTGKTYTLIELIQQLVAKGERVLVCGPSNIAVDTILERLDKVLPGNV-LLRIGHPAR 288
Query: 276 LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEE 335
LL L +LD G+ + DI K++ + K K+ R+E +K ++ L +E
Sbjct: 289 LLEANLAHSLDILSRSGNAGEIVKDIDKDIDKTISDIKKMKNYKDRKEARKLVKDLRREL 348
Query: 336 RKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS------FDLVIIDEAAQALEIACWIA 389
R R++ + D+I A VV+ TL GA SR+L + F+ +IIDE +Q+LE CWI
Sbjct: 349 RTREKKVICDMILEARVVVATLHGAGSRELCSVYDQVPKLFNTLIIDEVSQSLEQQCWIP 408
Query: 390 LLKG-----SRCILAGDHLQLPPTVQSVEAEKKG--LGRTLFERLADLYGDEVTSMLTVQ 442
L+ SR +LAGD+ QLPPT+++ + +K L TLF+RL +YGD+ ++L VQ
Sbjct: 409 LISHYRSDISRLVLAGDNKQLPPTIKTEDNKKIADQLSTTLFDRLVKVYGDQFKTLLNVQ 468
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEK 492
YRM+E IM + S ++YN ++ A S GV T L+ D G D E+
Sbjct: 469 YRMNESIMEFPSTEMYNGQLIADSSVKTQILSDLPGVDANDETLEPLIWYDTQGDDFLER 528
Query: 493 KDEED----STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK-ILRSKDDK 547
D+++ S NE EA + +H +L++S V S IG+I+PY AQ+ +K ++R++
Sbjct: 529 ADDDNEIIASKYNENEAYLVKSHILKLLESNVPQSAIGVISPYRAQISFIKKLIRAE--- 585
Query: 548 LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTE 607
+E+STVDGFQGREKE II+S+VRSN +VGFL D RR+NVA+TR+++Q C++ + E
Sbjct: 586 YPGIEISTVDGFQGREKEVIILSLVRSNDDYKVGFLKDSRRLNVAITRSKKQLCVIGNME 645
Query: 608 TV--SSDGFLKRLIEYFEEHAE 627
T+ S FL+ +++ ++ +
Sbjct: 646 TLERSKCKFLEEWVKWSSDNTD 667
>gi|225851051|ref|YP_002731285.1| DNA helicase [Persephonella marina EX-H1]
gi|225645408|gb|ACO03594.1| putative DNA helicase [Persephonella marina EX-H1]
Length = 653
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 233/666 (34%), Positives = 365/666 (54%), Gaps = 73/666 (10%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLE 75
QE+V+ L++LE+EAE + S + QKKG IL L Q +G+ + +
Sbjct: 9 QEYVTYWENLVELEREAEKDFHLNEILSLSGKERQKKGRAILGL-----QGRYIGEIIGD 63
Query: 76 FQSTK--GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEG 133
FQ + + +P H+ DVV++ K L +G V+ ITV F I G
Sbjct: 64 FQVYRFFKEDMPDHQINVGDVVLVS-RKHPLRDGI--EGTVFEKGKHFITVVFSQILPSG 120
Query: 134 LNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPF 193
R++ N++T++RM L KG P ++ G+ TV +++I F F
Sbjct: 121 --KKWRIDLFVNDITFKRMSGTLHMFEKGYSFFPEDTVL----GDNGYTVCEEEIQF--F 172
Query: 194 NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAV 253
N +L+ Q++A+ KA+ S +FM+HGPPGTGKTTT++E+I+Q V +G ++LA A SN AV
Sbjct: 173 NESLNQFQREAVKKAVCSDKLFMIHGPPGTGKTTTLLEVIIQHVSKGDRVLATADSNTAV 232
Query: 254 DNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
DNIVE LV V +VR+GHPARL ++L+ +LDA + + I K++K L
Sbjct: 233 DNIVEGLVERGVNVVRIGHPARLKKELLDVSLDAVAESHPDYNEVRSIEKKIKKLKSLQE 292
Query: 314 KTKDKNTRRE----------------------------------IQKELRTLSKEERKRQ 339
K +R +QKE++ LS +RK +
Sbjct: 293 SYKKPTAQRRRGLSYSDILKYAKSGKKVRGHRIETLKSMAEWIRLQKEIKKLSDRKRKIE 352
Query: 340 QLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILA 399
+ D++ +A+V+ T + A S L + FD+V IDEA+Q+ E +C I ++KG + ++A
Sbjct: 353 DRIINDILNSAEVICATNSTAGSEFLSDYVFDVVFIDEASQSTEPSCLIPVIKGLKVVMA 412
Query: 400 GDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYN 459
GDH QLPPTV + +A K L T+FER +Y E T ML +QYRM++ I + S++ Y+
Sbjct: 413 GDHKQLPPTVLNPDA--KDLSFTMFERFMKIY-PENTYMLKIQYRMNDIIKQFPSEEFYD 469
Query: 460 SKIKAHPSGVKRTSS-----------TEPT-LLLIDIAGCDMEEKKDEEDSTMNEGEAEV 507
++ + S R S T+ T ++ ID G +E++K S N EA+
Sbjct: 470 GQLISDESVKDRKLSDITGKEGDAPITDDTPVVFIDTEGKFLEKQKKGSRSKYNPEEAKA 529
Query: 508 AMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAI 567
+ ++L + GV DIG+ITPY LK + + ++EV TVDGFQGREKE I
Sbjct: 530 VKSIVEKLKEIGVLTEDIGVITPYKDHEDYLKKI------IPDVEVKTVDGFQGREKEVI 583
Query: 568 IISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAE 627
+IS+VRSN ++E+GFL D RR+NVA+TRA+R+ ++ D++T+SS+ ++LI++ +E
Sbjct: 584 VISLVRSNPEEEIGFLDDLRRLNVALTRAKRKVIIIGDSKTLSSNETYRKLIKFIKEKGT 643
Query: 628 YLSGSE 633
+++ E
Sbjct: 644 FVTVEE 649
>gi|168051009|ref|XP_001777949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670709|gb|EDQ57273.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 791
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 248/700 (35%), Positives = 374/700 (53%), Gaps = 90/700 (12%)
Query: 5 KTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITS--GASRNLDTAQKKGS-------- 54
+ E QS V FV+ L+ +E++AE+ A+ S GA+ + +A
Sbjct: 84 RVAEIQSNV--DSFVTRGLELLQIERDAELEATHQSLEGAASAIGSAPTSSGIAPRDKRD 141
Query: 55 --------TILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGS 106
+I NL + TGL G L+ LP D+V ++ + G
Sbjct: 142 EQALESCDSITNLIATGSTTGLGGMHLVTLSVEGKGHLPPTTISPGDMVCVRISDRRRGG 201
Query: 107 PALG--QGVVYRLK--DSSITVAF-----DDIPEEGLNSPLRLEK---LANEVTYRRMKD 154
+ +G VY L ++SI +A D LRL++ LA+ TY+R +
Sbjct: 202 STMECMRGSVYSLAEDNNSIAIAIEARYGDPTFSRLFGKSLRLDRISALADATTYQRDCE 261
Query: 155 ALIQLSKG--VQNGPAAGLIPVLFGEQKPTV--LKKDIAFKPFNS---------NLDHSQ 201
AL +L K + PAA ++ LFGE P + L ++ +P + LD SQ
Sbjct: 262 ALERLQKNGLKRQNPAAAVVATLFGE-GPDICWLAQNGPLRPASPVQQSSLKEVRLDESQ 320
Query: 202 KDAISKALSSKN-VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERL 260
K AI L K V ++ GPPGTGKT+ V E+I + V RG ++LA A +N AVDNIVERL
Sbjct: 321 KRAIEMGLDRKRPVVVIQGPPGTGKTSVVTELIEKAVMRGERVLATAPTNAAVDNIVERL 380
Query: 261 VPHRVRLVRLGHPARLLPQVLESALDAQV------LRGD----NSSLASDIRKEMKALNG 310
+ +VR+G+PAR+ P V +L V RGD ++L SD+R+ +
Sbjct: 381 ANAGLNVVRVGNPARVAPAVCSRSLSFIVDKSLTTFRGDLVRRRANLRSDLRECLD---- 436
Query: 311 KLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA---VSRKLDN 367
+ + I++ L+ L K +++++ A+ D + +A V+L T TGA + RK +
Sbjct: 437 ------NDSVAAGIRQVLKQLGKSLKQKEKEAINDALSSAQVILCTNTGAGDPLIRKQE- 489
Query: 368 TSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERL 427
+FDLV++DEAAQA+E +CWI LL+G RC+LAGD QL PT+ S A GLG +L ER
Sbjct: 490 -AFDLVVVDEAAQAIEPSCWIPLLQGRRCVLAGDASQLAPTIMSRTALDGGLGVSLMERA 548
Query: 428 ADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEP 477
+L+ +++ML+ QYRMH I +W+S ++Y +++ P+ GVK T T+
Sbjct: 549 GNLHSGLLSTMLSTQYRMHSAIADWASHEMYGGSLRSAPAVASHLLRDTPGVKDTPVTKV 608
Query: 478 TLLLID--------IAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIIT 529
+LL+D I GC+ S NEGEA++ + H + L+ +GV S I + +
Sbjct: 609 PMLLLDTRLPFGSLIPGCEERLDPAGTGSFYNEGEADIVVDHIRALLATGVEPSSIAVQS 668
Query: 530 PYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRM 589
PY AQV LL + + ++V++VD FQGRE +A+++SMVRSN+ VGFL D RRM
Sbjct: 669 PYMAQVQLLCDRIEEIPGAEGVQVASVDSFQGREADAVVVSMVRSNNIGVVGFLGDNRRM 728
Query: 590 NVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYL 629
NVAVTRAR+ +VCD+ TVS + FL+RL+++ E L
Sbjct: 729 NVAVTRARKHVTIVCDSTTVSRNSFLQRLLQHIRRFGEVL 768
>gi|134114680|ref|XP_774048.1| hypothetical protein CNBH0940 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256678|gb|EAL19401.1| hypothetical protein CNBH0940 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 748
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 250/726 (34%), Positives = 361/726 (49%), Gaps = 115/726 (15%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
S+Q F++ L++LE++AE + + + +++G + L GL GK+L
Sbjct: 15 SVQAFLNRHKQLLELERKAEEEQTRLLNSKCSPSLLEQRGLALNGLGVSGISIGLGGKSL 74
Query: 74 LEFQST----KGDVLPAHKFGTHDVVVLKPNKADLGSPALG-----------QGVVYRLK 118
+E LP H F D V ++ + A G +GVVYR+
Sbjct: 75 IELHRPLAYHTSPALPPHTFRPGDPVRIEAHVATTSGKIKGKKRESEDEGAVEGVVYRVG 134
Query: 119 DSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQL------SKGVQNGPAAG-- 170
+ VA ++ E L LRL KLAN VT+ RM+ L L S G + P+
Sbjct: 135 PEKVVVAVNESKEIDLPERLRLLKLANSVTFDRMEKTLAHLERLVLPSGGTPSPPSFNMP 194
Query: 171 LIPVLFGEQKPTV---------------LKKDIAFKPFNSNLDHSQKDAISKALSSKNVF 215
L+ L G+Q PT L D K F +L+ SQK++I L + V
Sbjct: 195 LVQALLGKQLPTWKETIPPQNNIEPLGQLSSDEDMKWFGQHLNDSQKESIKFCLKANEVA 254
Query: 216 MLHGPPGTGKTTTVVEIILQEVKRGS--------KILACAASNIAVDNIVERL------V 261
+HGPPGTGKT T+VE+I Q + R + +IL SN+A+DN++ RL
Sbjct: 255 CIHGPPGTGKTHTLVELIFQLLSRPASPNTTLPPRILITTPSNLALDNLLIRLHILAQQP 314
Query: 262 PH-----RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK 316
P+ R +R+GHP R+ +++ LD + GD L D+ KEM+ L K +
Sbjct: 315 PYSSLLPRNSFLRMGHPTRVHRDLVKETLDWKAANGDQGELLKDVGKEMQGHLDALGKKR 374
Query: 317 DKN------TRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
+ R + E+R L KE R+R+ V V+ A +VL T A SR+L+N F
Sbjct: 375 GEKGAVKGKERGKKWGEVRELRKEYRQREGKVVKTVVNGAQIVLATCHSAGSRQLNNMIF 434
Query: 371 DLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVE----------------- 413
D+ IIDEA QA+E CW+ +LK + ILAGD QLPPT+ S E
Sbjct: 435 DVCIIDEATQAVEAVCWVPILKSKKLILAGDPQQLPPTIMSKENAPPLKDLQEAIDQIKL 494
Query: 414 ------AEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS 467
+ L TLFERL LYG + +L VQYRM+EHI + S+ LY S + + S
Sbjct: 495 GDSPSLKSPRTLETTLFERLEKLYGPGIKRVLQVQYRMNEHIAVFPSETLYESALISDAS 554
Query: 468 GVKRT----------------SSTEPTLLLIDIAGCDMEEKKD----------EEDSTMN 501
KRT EPT++ D A C+ E+ + E S N
Sbjct: 555 VAKRTLLELPSVKDKTSEDVKDDLEPTVVFFDTADCEFYERTEGDGEATKSSIGEGSKSN 614
Query: 502 EGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQG 561
E EAE+ A++LI G+ +IGI+TPY AQV L+ L ++ M + +VDG QG
Sbjct: 615 ENEAEIVARWARKLISLGIPPIEIGIVTPYQAQVTLISSLLH--EEYPEMTIGSVDGLQG 672
Query: 562 REKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS-SDGFLKRLIE 620
+E+EAII+S+VRSN EVGFL + RR+NVA+TRA+RQ C+V D++TVS +LK+ ++
Sbjct: 673 QEREAIILSLVRSNPSGEVGFLGEYRRLNVAMTRAKRQLCVVGDSKTVSKGTKYLKKWMD 732
Query: 621 YFEEHA 626
+ E A
Sbjct: 733 WLEAEA 738
>gi|302652772|ref|XP_003018229.1| hypothetical protein TRV_07762 [Trichophyton verrucosum HKI 0517]
gi|291181848|gb|EFE37584.1| hypothetical protein TRV_07762 [Trichophyton verrucosum HKI 0517]
Length = 1112
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 215/555 (38%), Positives = 314/555 (56%), Gaps = 66/555 (11%)
Query: 111 QGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRR---MKDALIQLSKGVQNGP 167
+GVV R+ + SI AF D + + E +E+ R+ M + +L K +
Sbjct: 568 EGVVTRVGERSIWAAFGDRGKGKQD-----EDGVDELWGRKLWLMNQTMAKLEK-MPESE 621
Query: 168 AAGLIPVLFGEQKPTVLKKDI--AFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGK 225
+ LI VLFG P+ L + + +++L+ SQK+AI AL+S+ + ++HGPPGTGK
Sbjct: 622 HSQLIRVLFGHTTPSPLDFESVGTLEFMDASLNDSQKEAIRFALASREIALIHGPPGTGK 681
Query: 226 TTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESAL 285
T T++E+I Q V+R ++L C SNI+VDNIVERL H+V LVR+GHPARLL VL+ +L
Sbjct: 682 THTLIELIRQLVQRKKRVLVCGPSNISVDNIVERLALHKVPLVRIGHPARLLSSVLDHSL 741
Query: 286 DAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTD 345
+ + +++ D+RKE+ + + KT++ RR I +L+ L KE R+R+ V +
Sbjct: 742 EVLSQTSEAAAIVKDVRKEIDSKQASIRKTRNGRERRAIYGDLKELRKEFRERESKCVDN 801
Query: 346 VIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQL 405
++ + VVL TL GA +L N FD+V+IDEA+QA E CWI LL SR +LAGDHLQL
Sbjct: 802 IVSGSQVVLGTLHGAGGHQLKNQKFDVVLIDEASQAREAQCWIPLLPASRVVLAGDHLQL 861
Query: 406 PPTVQ-------------------------SVEAEKKGLGRTLFERLADLYGDEVTSMLT 440
PPT++ S + + L TLF+RL L+G + +LT
Sbjct: 862 PPTIKSKSSSKSDQTNSALWDKEDLHFNELSNTFDMRNLEITLFDRLLSLHGTGIKRVLT 921
Query: 441 VQYRMHEHIMNWSSKQLYNSK-----------IKAHPSGVKRTSSTEPTLLLIDIAGCDM 489
QYRMH+ IM++ S +LY SK +K P V+ T T L+ D G D
Sbjct: 922 TQYRMHQKIMDFPSDELYESKLIAADAVRERLLKDLPYEVEDTDDTREPLVFYDTQGGDF 981
Query: 490 EEKKDEED----------STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK 539
EK + + S N+ EA V H + L+ +GV DI +ITPY AQV LL
Sbjct: 982 PEKSPDSNGISAKSLLVESKCNDMEAAVVARHVENLVSAGVRPEDIAVITPYNAQVALLS 1041
Query: 540 ILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 599
L +KL +E+ +VDGFQGREKEA+++S+VRSNS EVGFL ++RR+N +
Sbjct: 1042 QLLK--EKLPTLELGSVDGFQGREKEAVVVSLVRSNSDHEVGFLGEKRRLNEDI------ 1093
Query: 600 CCLVCDTETVSSDGF 614
C+ +T+ + + GF
Sbjct: 1094 -CVFVETQKLLAGGF 1107
>gi|354546507|emb|CCE43239.1| hypothetical protein CPAR2_208840 [Candida parapsilosis]
Length = 672
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 236/626 (37%), Positives = 352/626 (56%), Gaps = 62/626 (9%)
Query: 53 GSTILNLKCVDAQTGLMGKTLLEFQ----STKGDVLPAHKFGTHDVVVLKPNKADLGSPA 108
G ++NL + +TG+ GKT+LE Q + GD L + T D+V + A
Sbjct: 38 GLAVINLNITNMRTGIGGKTILEMQLDNAVSNGD-LSSVSMKTGDIVRIAKMTKAERKKA 96
Query: 109 LG-----------QGVVYRLKDSSITVAFDDIPEEG--LN--------SPLRLEKLANEV 147
VV ++ + +IT++ D+ + LN S + KLAN +
Sbjct: 97 KKEEETQDCDESIDAVVVKVSNQTITLSVDESTSDDKILNYYNNTNDSSRFWIVKLANSI 156
Query: 148 TYRRM---KDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
TY+RM + +++L + +N + +L GE K +L + FNS L+ SQK A
Sbjct: 157 TYKRMITTMNKVLELKESEKND----IHKLLLGETKHNLLSGNSTINFFNSGLNQSQKSA 212
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
I A++ N+ ++ GPPGTGKT T+VE+I Q RG K+L C SNI+VD I+ERL H
Sbjct: 213 IDFAINKSNISIIFGPPGTGKTMTLVELIRQLTLRGEKVLVCGPSNISVDTILERLGSHY 272
Query: 265 V--RLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRR 322
L+R+GHPARLLP L+ +L+ + + + D+ +++++ K+ K K R+
Sbjct: 273 KAGELIRIGHPARLLPVNLQHSLEV-LSKSFGREVIKDLENDIQSVLNKIKKCKRYTERK 331
Query: 323 EIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNT--SFDLVIIDEAAQ 380
+ +EL+ L KE +R++ V +++ A VVL TL GA S L + SFD +IIDE +Q
Sbjct: 332 ALYQELKQLKKELVQRERKIVHELLNGAQVVLATLHGAGSFDLKRSGVSFDTIIIDEVSQ 391
Query: 381 ALEIACWIALL---KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA-DLYGDEVT 436
+LE CWI LL K R ++AGD++QLPPT+ S A L TLF+RL ++ G++
Sbjct: 392 SLEPQCWIPLLHNDKFKRLVIAGDNMQLPPTIISGNASL--LETTLFDRLVKEVEGNKYK 449
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAG 486
+L VQYRM++ IM + S QLY K+ + S V+ T + D G
Sbjct: 450 KLLNVQYRMNDSIMKFPSMQLYEDKLISDASVKNIKLTDLPDVESNDETSIQCVWYDTQG 509
Query: 487 CDMEEKKDEE---DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRS 543
D E+K E DS NE E ++ +H +RL+ SGV DIG+I PYAAQV LLK
Sbjct: 510 GDFPEQKLESIKGDSKYNEMELQIVKSHIRRLVDSGVLPQDIGVIAPYAAQVQLLKKQLG 569
Query: 544 KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLV 603
+ + EVSTVDGFQGREKE II+++VRSN +++VGFLS+ RR+NVA+TR +RQ C++
Sbjct: 570 PESLI---EVSTVDGFQGREKEVIILTLVRSNDERDVGFLSEERRLNVAITRPKRQLCVI 626
Query: 604 CDTETVSSDG--FLKRLIEYFEEHAE 627
D + ++ G FL+ +Y E+ E
Sbjct: 627 GDLQLMNESGHKFLQNWSKYVEDGFE 652
>gi|254565491|ref|XP_002489856.1| Hexameric DNA polymerase alpha-associated DNA helicase A involved
in lagging strand DNA synthesis [Komagataella pastoris
GS115]
gi|238029652|emb|CAY67575.1| Hexameric DNA polymerase alpha-associated DNA helicase A involved
in lagging strand DNA synthesis [Komagataella pastoris
GS115]
gi|328350271|emb|CCA36671.1| hypothetical protein PP7435_Chr1-0519 [Komagataella pastoris CBS
7435]
Length = 726
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 246/681 (36%), Positives = 385/681 (56%), Gaps = 107/681 (15%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEF---QSTKG------------DVLPAHKFGTHDV 94
Q KG IL+L+ + + G GKT++E ST G + L F D+
Sbjct: 38 QSKGLAILSLEITNTRPGYGGKTIIELAKHSSTVGSKRKSKQKDQPDESLEFGDFKVGDM 97
Query: 95 VVLKPNKADLGSPALG--------------------QGVVYRLKDSSITVAFDDIPEEGL 134
VVL +A +P + VV +++ + I +A
Sbjct: 98 VVLDSYQASDYNPKKLKNSSKKSDQEAHEDLEQVDLEAVVVKMRKNEIHIALSSDSNSQS 157
Query: 135 NSPLRLE----------------KLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGE 178
S ++++ KL+N +TY+RM L +LS+ V + A LI +L GE
Sbjct: 158 VSSIKIDEKLAHLNNNSMKCWLVKLSNTITYKRMAQGLTRLSE-VNSDSAPELIRLLLGE 216
Query: 179 QK---PT----VLK-KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVV 230
++ PT V K +++ F+ N L+ SQ++AI+ AL S + ++HGPPGTGKT+T+V
Sbjct: 217 EQFKAPTSSDLVSKMENLTFE--NDGLNDSQREAINFALQSP-ITIIHGPPGTGKTSTLV 273
Query: 231 EIILQEVK-RGS---KILACAASNIAVDNIVER---LVPHRV----RLVRLGHPARLLPQ 279
E++ Q VK RGS +IL C SNI+VD I+ER L P++ +L+R+GHPARLL
Sbjct: 274 ELVRQLVKARGSSSKRILICGPSNISVDTILERLDDLYPNKADSMSKLIRVGHPARLLSS 333
Query: 280 VLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQ 339
+L +L+ + +++ + DI KE++ L K K K R++ +++ L K+ R+R
Sbjct: 334 ILNHSLELLIQGSESNEILKDIIKEIQDLMKKSKKMKSYRERKDCYLDVKNLRKDLRERA 393
Query: 340 QLAVTDVIKNADVVLTTLTGAVSRKLDNTS-------FDLVIIDEAAQALEIACWIALLK 392
+ +++I+++ VV++TL GA SR+L + + FD +IIDE +Q+LE CWI L+
Sbjct: 394 RKITSELIRSSQVVVSTLHGASSRELFDAALNSQEGLFDTLIIDEVSQSLEPQCWIPLMA 453
Query: 393 GS---RCILAGDHLQLPPTVQSV-EAEKKG-----LGRTLFERLADLYGDEVTSMLTVQY 443
+ + I+AGD+ QL PT++++ E ++K L TLF+RL ++G L +QY
Sbjct: 454 HTGINKLIIAGDNKQLSPTIKTLPEGKQKSKVVDILSTTLFDRLVSIHGQSFVKFLNIQY 513
Query: 444 RMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLIDIAGCDMEEK 492
RM+E IM + S +LY +K+ AH P V+ T T L+ D G + E+
Sbjct: 514 RMNEKIMRFPSNELYGAKLIAHKSVANKTCLDLPYRVEETDDTIEPLIWYDTQGDEFPEQ 573
Query: 493 KDEED--STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK-ILRSKDDKLK 549
+ EED S NE EA + H + L+++GV +DIGII+PY AQV LK +L + DD+L
Sbjct: 574 ETEEDQGSKYNENEALLVAKHVRILLKAGVLQTDIGIISPYNAQVSFLKELLINGDDQLT 633
Query: 550 NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
+E+STVDGFQGREKE II+++VRSN +KEVGFL D RR+NV++TRA++Q C++ D ET+
Sbjct: 634 ELEISTVDGFQGREKEIIILTLVRSNREKEVGFLKDFRRLNVSMTRAKKQLCVIGDMETL 693
Query: 610 SSD---GFLKRLIEYFEEHAE 627
+ FL + +++ EE A+
Sbjct: 694 GENETTKFLSKWVKWCEEEAD 714
>gi|367011180|ref|XP_003680091.1| hypothetical protein TDEL_0B07510 [Torulaspora delbrueckii]
gi|359747749|emb|CCE90880.1| hypothetical protein TDEL_0B07510 [Torulaspora delbrueckii]
Length = 667
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 231/628 (36%), Positives = 348/628 (55%), Gaps = 63/628 (10%)
Query: 53 GSTILNLKCVDAQTGLMGKTLLEFQSTKG--DVLPAHKFGTHDVVVLKP----------N 100
G I NL + +TGL GK +E + D + + D+V++KP N
Sbjct: 40 GYAISNLNLENLRTGLGGKLYMELGPDRAISDEISRGDIKSGDIVLIKPKTSGSRKNRRN 99
Query: 101 KADLGSPALGQGVVYRLKDSSITVAFDDIPEEGL-----NSPLRLEKLANEVTYRRMKDA 155
GVV+++ D + + ++ E+ ++ L + K N +TY+RM+ +
Sbjct: 100 GEKEDEEDQCDGVVFKITDRQLVITTNENQEDAAARLFASNRLYVLKTTNTITYQRMESS 159
Query: 156 LIQLSKGVQNGPAAGLIPVL-----FGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALS 210
+ +L + ++ P + L F QKP+ D++F N +L+ Q+DAI AL+
Sbjct: 160 MRKLGE-FESVPNNKITQYLLTDRPFLAQKPS---NDVSFH--NKSLNEPQQDAIRFALA 213
Query: 211 SKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERL---VPHRVRL 267
+ ++ ++HGPPGTGKT T++E+I Q +G +IL C SN+AVD I+ERL +P + L
Sbjct: 214 N-DICIIHGPPGTGKTYTLIELIQQLCDKGQRILVCGPSNMAVDTILERLAKVLPGNL-L 271
Query: 268 VRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKE 327
+R+GHPARLL L +LD G + DIR E+ + K K RR+ +
Sbjct: 272 LRIGHPARLLDSNLAHSLDILSKSGSAGGILKDIRDEIDRKIASIKKIKSSRERRQGWND 331
Query: 328 LRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS------FDLVIIDEAAQA 381
++ L KE R+R++ + D+I A V++ TL G+ SR+L + FD +IIDE +Q+
Sbjct: 332 VKELRKELRQRERKVIVDLILEARVIVATLHGSSSRELCSVYHQTPKLFDCLIIDEVSQS 391
Query: 382 LEIACWIALLKG-----SRCILAGDHLQLPPTVQSVEAE--KKGLGRTLFERLADLYGDE 434
LE CWI L+ S+ +LAGD+ QLPPT+++ + KK L TLF+RL YGD
Sbjct: 392 LEPQCWIPLISHYRSDISKLVLAGDNKQLPPTIKTEDDANIKKTLQTTLFDRLVAYYGDS 451
Query: 435 VTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDI 484
+L+VQYRM+E IM + S+ LYN ++ A S GV T+ + D
Sbjct: 452 FKRLLSVQYRMNEEIMKFPSETLYNGQLAADDSVATKILSDLPGVDSNDDTDAPFIWYDT 511
Query: 485 AGCDMEEKKDEED---STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL 541
G + E EE S NE EA + H +RLI S V + IG+I PY+AQV +LK
Sbjct: 512 QGDEFIESSQEESVVASKFNENEALLVKDHIQRLIDSNVSQNSIGVIAPYSAQVTILKHF 571
Query: 542 RSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
S +K +E+STVDGFQGREKE II+S+VRSN K E+GFL D RR+NVA+TR ++Q C
Sbjct: 572 LS--EKFPQIEISTVDGFQGREKEVIILSLVRSNDKFEIGFLKDERRLNVAMTRPKKQLC 629
Query: 602 LVCDTETVS--SDGFLKRLIEYFEEHAE 627
++ + ET+ + FLK +Y E +A+
Sbjct: 630 VIGNIETLQRCNSKFLKAWAKYGETNAD 657
>gi|344304991|gb|EGW35223.1| hypothetical protein SPAPADRAFT_53535 [Spathaspora passalidarum
NRRL Y-27907]
Length = 685
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 236/654 (36%), Positives = 368/654 (56%), Gaps = 72/654 (11%)
Query: 32 AEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQ--STKGDV-LPAHK 88
+E A I+ + + L + G I+NL+ ++ +TGL KT++E + GD +
Sbjct: 20 SETDAYISMYSPKKLSSL---GLAIINLQIINLRTGLGAKTIIELKLDPAFGDTDINTGT 76
Query: 89 FGTHDVVVLK---------------------PNKADLGSPALGQGVVYRLKDSSITVAFD 127
T D+V L N D + + VV ++ +I+++ +
Sbjct: 77 LRTGDIVKLSKMEKSTSTNAKKKKTKSTTSTENSEDSEDQGI-EAVVLKVSTQTISISVE 135
Query: 128 DIPEEGL-----------NSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLF 176
+ ++ ++ + L KLAN +TY+RM + ++++ +Q + +L
Sbjct: 136 ESTDDAHVLQYYNNTNNDSTRMWLVKLANSITYKRMISTMNKVNE-LQPSDKNDIHKLLL 194
Query: 177 GEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQE 236
GE + + FNS+L+ SQK AI A++ N+ ++HGPPGTGKT T++E+I Q
Sbjct: 195 GESSYISHQNNHFITFFNSHLNDSQKQAIEFAINKSNITIIHGPPGTGKTYTLIELIQQL 254
Query: 237 VKRGSKILACAASNIAVDNIVERLVPHRV--RLVRLGHPARLLPQVLESALDAQVLRGDN 294
G K+L C SNI+VD I+ERL +L+R+GHPARLLP L+ +L+ + +
Sbjct: 255 TNLGEKVLVCGPSNISVDTILERLGDKYKSGQLIRIGHPARLLPVNLQHSLEI-LSKSYG 313
Query: 295 SSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVL 354
+ SDI ++ + K+ K K RRE+ +EL+ L +E ++R++ V +++ NA VV+
Sbjct: 314 REIISDIEHDISSTLTKIRKCKRYAERRELYQELKLLKRELKQREKKIVHELLINARVVV 373
Query: 355 TTLTGAVSRKL--DNTSFDLVIIDEAAQALEIACWIALL---KGSRCILAGDHLQLPPTV 409
TL G+ S +L ++ +FD +IIDE +Q++E CWI LL K R ++AGD++QLPPTV
Sbjct: 374 ATLHGSGSYELRTNDLAFDTIIIDEVSQSMEPQCWIPLLLNTKFKRLVIAGDNMQLPPTV 433
Query: 410 QSVEAEKKG---LGRTLFERLA-DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH 465
+SV+ +KG L TLF+RL G++ +L VQYRM+ IM + + QLY++K+K+
Sbjct: 434 KSVK--RKGSSILETTLFDRLVLKGEGNKFKKLLDVQYRMNTSIMMFPNMQLYSNKLKSD 491
Query: 466 PS----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEE---DSTMNEGEAEVAMAHA 512
S GV+ T + D G + E+ E DS NE E V H
Sbjct: 492 SSVENITLSELPGVEENDDTLCKCIWYDTQGGEFPEQVSESVEGDSKYNEMELLVVRGHI 551
Query: 513 KRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMV 572
++L+ GV DIG+I PYAAQV LLK + ++ E+STVDGFQGREKE II+++V
Sbjct: 552 EKLLSDGVQPKDIGVIAPYAAQVQLLKKQMGPETEI---EISTVDGFQGREKEVIILTLV 608
Query: 573 RSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG--FLKRLIEYFEE 624
RSN +E+GFLSD+RR+NVA+TR +RQ C++ D E +SS G FLK +Y EE
Sbjct: 609 RSNESREIGFLSDQRRLNVAITRPKRQLCVIGDLELMSSSGSIFLKNWCKYVEE 662
>gi|41053136|dbj|BAD08079.1| putative DNA helicase [Oryza sativa Japonica Group]
Length = 794
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 232/653 (35%), Positives = 356/653 (54%), Gaps = 54/653 (8%)
Query: 23 APLIDLEKEAE--ISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTK 80
AP++D + E + ++ G S+ Q++ TI NL + + TGL G L+ F+
Sbjct: 122 APMLDDDSEPPKPVEYLVSHGQSQ-----QEQCDTICNLNVISSSTGLGGLHLVLFRIEG 176
Query: 81 GDVLPAHKFGTHDVVVLKP-NKADLGSPALGQGVVYRLKD--SSITVAFDDIPEEGLNSP 137
G LP D+V ++ N G+ + QG VY L + SIT+A + + S
Sbjct: 177 GHKLPPTTLSPGDMVCVRTCNSRGEGATSCMQGFVYNLGEDGCSITLALESRHGDPTFSR 236
Query: 138 L--------RLEKLANEVTYRRMKDALIQLSK-GVQNGPAA-GLIPVLFGEQKPTVLKKD 187
L R++ LA+ +TY R +ALI L + G+Q A+ G++ LFG+ K + +
Sbjct: 237 LFGKSVRIDRIQGLADALTYERNLEALIILQRNGLQKSNASIGVVATLFGDNKDVMKMEQ 296
Query: 188 IAFKPFNSN------------LDHSQKDAISKALSSKN-VFMLHGPPGTGKTTTVVEIIL 234
+ + LD SQ A+S L+ K V ++ GPPGTGKT + E+I+
Sbjct: 297 NHLTDWGESSAPDPRISERYALDASQLKALSLGLNKKRPVLIIQGPPGTGKTVLLTELIV 356
Query: 235 QEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDN 294
+ V++G +L A SN AVDN+VERL + +VR+G+PAR+ P V +L A+++ G
Sbjct: 357 RAVQQGENVLVTAPSNAAVDNMVERLSNTGLNIVRVGNPARISPSVASKSL-AEIVNGRL 415
Query: 295 SSLASDIRKEMKALNGKL-LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVV 353
++ ++ L L +D + I++ L+ L ++ K+++ + + + A VV
Sbjct: 416 EQFRKELERKRSDLRKDLSYCIEDDSLAAGIRQLLKQLGRDLEKKEKEMIREALSEAQVV 475
Query: 354 LTTLTGAVSRKLDNTS-FDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSV 412
L+T TGA + T FDLVIIDEA QA+E +CWI +L+G RCILAGDH QL P + S
Sbjct: 476 LSTNTGAADPLIRRTCCFDLVIIDEAGQAIEPSCWIPILQGKRCILAGDHCQLAPVILSR 535
Query: 413 EAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT 472
+A GLG++L ER + L+ +T+ LTVQ+RM++ I +W+SK++Y+ +K+ S +T
Sbjct: 536 KALDGGLGKSLLERASSLHNGLLTTRLTVQHRMNDSIASWASKEMYHGLLKSSHSVASQT 595
Query: 473 SSTEPT----------LLLIDI--------AGCDMEEKKDEEDSTMNEGEAEVAMAHAKR 514
+ P LLL+D GC + S N+GEA++ H
Sbjct: 596 LADSPVVKATWITRCPLLLLDTRMPYGALDTGCGEQIDLSGTGSFYNDGEADIVTQHVLN 655
Query: 515 LIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRS 574
L+ GV + I + +PY AQV LL+ + L +EVST+D FQGRE +A++ISMVRS
Sbjct: 656 LVHCGVSPTAIAVQSPYIAQVQLLRERLEEYPGLSGVEVSTIDSFQGREADAVVISMVRS 715
Query: 575 NSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAE 627
N VGFL D RRMNVA+TRA R +VCDT T+ FL RL+ + + +
Sbjct: 716 NPLGAVGFLGDSRRMNVAITRACRHVTVVCDTSTICHSTFLARLLRHIRRYGQ 768
>gi|222623514|gb|EEE57646.1| hypothetical protein OsJ_08074 [Oryza sativa Japonica Group]
Length = 980
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 236/653 (36%), Positives = 357/653 (54%), Gaps = 54/653 (8%)
Query: 23 APLIDLEKEAE--ISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTK 80
AP++D + E + ++ G S+ Q++ TI NL + + TGL G L+ F+
Sbjct: 308 APMLDDDSEPPKPVEYLVSHGQSQ-----QEQCDTICNLNVISSSTGLGGLHLVLFRIEG 362
Query: 81 GDVLPAHKFGTHDVVVLKP-NKADLGSPALGQGVVYRLKD--SSITVAFDDIPEEGLNSP 137
G LP D+V ++ N G+ + QG VY L + SIT+A + + S
Sbjct: 363 GHKLPPTTLSPGDMVCVRTCNSRGEGATSCMQGFVYNLGEDGCSITLALESRHGDPTFSR 422
Query: 138 L--------RLEKLANEVTYRRMKDALIQLSK-GVQNGPAA-GLIPVLFGEQKP------ 181
L R++ LA+ +TY R +ALI L + G+Q A+ G++ LFG+ K
Sbjct: 423 LFGKSVRIDRIQGLADALTYERNLEALIILQRNGLQKSNASIGVVATLFGDNKDVMKMEQ 482
Query: 182 ---TVLKKDIAFKPFNSN---LDHSQKDAISKALSSKN-VFMLHGPPGTGKTTTVVEIIL 234
T + A P S LD SQ A+S L+ K V ++ GPPGTGKT + E+I+
Sbjct: 483 NHLTDWGESSAPDPRISERYALDASQLKALSLGLNKKRPVLIIQGPPGTGKTVLLTELIV 542
Query: 235 QEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDN 294
+ V++G +L A SN AVDN+VERL + +VR+G+PAR+ P V +L A+++ G
Sbjct: 543 RAVQQGENVLVTAPSNAAVDNMVERLSNTGLNIVRVGNPARISPSVASKSL-AEIVNGRL 601
Query: 295 SSLASDIRKEMKALNGKL-LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVV 353
++ ++ L L +D + I++ L+ L ++ K+++ + + + A VV
Sbjct: 602 EQFRKELERKRSDLRKDLSYCIEDDSLAAGIRQLLKQLGRDLEKKEKEMIREALSEAQVV 661
Query: 354 LTTLTGAVSRKLDNTS-FDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSV 412
L+T TGA + T FDLVIIDEA QA+E +CWI +L+G RCILAGDH QL P + S
Sbjct: 662 LSTNTGAADPLIRRTCCFDLVIIDEAGQAIEPSCWIPILQGKRCILAGDHCQLAPVILSR 721
Query: 413 EAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT 472
+A GLG++L ER + L+ +T+ LTVQ+RM++ I +W+SK++Y+ +K+ S +T
Sbjct: 722 KALDGGLGKSLLERASSLHNGLLTTRLTVQHRMNDSIASWASKEMYHGLLKSSHSVASQT 781
Query: 473 SSTEPT----------LLLIDI--------AGCDMEEKKDEEDSTMNEGEAEVAMAHAKR 514
+ P LLL+D GC + S N+GEA++ H
Sbjct: 782 LADSPVVKATWITRCPLLLLDTRMPYGALDTGCGEQIDLSGTGSFYNDGEADIVTQHVLN 841
Query: 515 LIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRS 574
L+ GV + I + +PY AQV LL+ + L +EVST+D FQGRE +A++ISMVRS
Sbjct: 842 LVHCGVSPTAIAVQSPYIAQVQLLRERLEEYPGLSGVEVSTIDSFQGREADAVVISMVRS 901
Query: 575 NSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAE 627
N VGFL D RRMNVA+TRA R +VCDT T+ FL RL+ + + +
Sbjct: 902 NPLGAVGFLGDSRRMNVAITRACRHVTVVCDTSTICHSTFLARLLRHIRRYGQ 954
>gi|321261778|ref|XP_003195608.1| DNA helicase [Cryptococcus gattii WM276]
gi|317462082|gb|ADV23821.1| DNA helicase, putative [Cryptococcus gattii WM276]
Length = 748
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 248/727 (34%), Positives = 366/727 (50%), Gaps = 115/727 (15%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
++Q F+S L++LE++AE + + + +++G + L GL GK+L
Sbjct: 15 TIQLFLSRHRQLLELERKAEEEQTRLLNSKCSPSLLEQRGLALNGLGVSGISIGLGGKSL 74
Query: 74 LEFQST----KGDVLPAHKFGTHDVVVLKPNKADLGSPALG-----------QGVVYRLK 118
+E LP + F + D V ++ + + + G +GVVYR+
Sbjct: 75 IELHRPLAYHTSPALPPNTFRSGDPVRIEAHVSSASTKNKGKRKESEDESAVEGVVYRVG 134
Query: 119 DSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQL------SKGVQNGPAAG-- 170
+ VA ++ E L LRL KLAN VT+ RM+ L L S G + P+
Sbjct: 135 PEKVVVAVNESKEIDLPERLRLLKLANSVTFDRMERTLTHLECLVLPSGGTPSPPSFNMP 194
Query: 171 LIPVLFGEQKPTV---------------LKKDIAFKPFNSNLDHSQKDAISKALSSKNVF 215
L+ VL G+Q PT L D K F +L+ SQK++I L + V
Sbjct: 195 LVQVLLGKQLPTWKETIPPQNNVEALGQLSSDEDMKWFGQHLNDSQKESIKFCLKANEVA 254
Query: 216 MLHGPPGTGKTTTVVEIILQEVKRGS--------KILACAASNIAVDNIVERL------V 261
+HGPPGTGKT T+VE+I Q + R + +IL SN+A+DN++ RL
Sbjct: 255 CIHGPPGTGKTHTLVELIFQLLSRTASPNTTLPPRILITTPSNLALDNLLIRLHILTQQP 314
Query: 262 PHRVRL-----VRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKA-LNGKLLKT 315
P+ L +R+GHP R+ +++ LD + D L D+ KEM+ LN K
Sbjct: 315 PYNSLLSSNSFLRMGHPTRVHRDLVKETLDWKAANSDQGELLKDVGKEMQGHLNALGKKR 374
Query: 316 KDKNT-----RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
+K R + +E+R L KE R+R+ V V+ A +VL T A SR+L+N +F
Sbjct: 375 GEKGAVKGKERGKKWEEVRELRKEYRRRESKVVETVVNGAQIVLATCHSAGSRQLNNMTF 434
Query: 371 DLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVE----------------- 413
D+ IIDEA QA+E CW+ +LK + ILAGD QLPPT+ S E
Sbjct: 435 DVCIIDEATQAVEAVCWVPILKSKKLILAGDPQQLPPTIMSKENAPPLKDLQGAIDQIKL 494
Query: 414 ------AEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS 467
+ L TLFERL LYG + +L VQYRM+EHI + S+ LY S + + S
Sbjct: 495 GDSLSIKPPRTLETTLFERLEKLYGLGIKRILQVQYRMNEHIAVFPSETLYESALISDAS 554
Query: 468 GVKRT----------------SSTEPTLLLIDIAGCDMEEKKD----------EEDSTMN 501
KRT EPT++ D A C+ E+ + E S N
Sbjct: 555 VAKRTLLELPSVNDKTSEDVKDDLEPTVVFFDTADCEFYERTEGDGEAIKSSIGEGSKSN 614
Query: 502 EGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQG 561
E EAE+ A++LI G+ +IGI+TPY AQV + L ++ M + ++DG QG
Sbjct: 615 ENEAEIVARWARKLISLGIPPIEIGIVTPYQAQVTFISSLL--HEEYPEMTIGSIDGLQG 672
Query: 562 REKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS-SDGFLKRLIE 620
+E+EAII+S+VRSN EVGFL + RR+NVA+TRA+RQ C+V D++TVS +LK+ ++
Sbjct: 673 QEREAIILSLVRSNPSGEVGFLGEYRRLNVAMTRAKRQLCVVGDSKTVSKGTKYLKKWMD 732
Query: 621 YFEEHAE 627
+ E A+
Sbjct: 733 WLEAEAD 739
>gi|414871608|tpg|DAA50165.1| TPA: hypothetical protein ZEAMMB73_963119 [Zea mays]
Length = 341
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 175/249 (70%), Positives = 201/249 (80%), Gaps = 17/249 (6%)
Query: 401 DHLQLPPTVQSVEAEKKGLGRTLFERLAD-----LYGDEVTSMLTVQYRMHEHIMNWSSK 455
D + L P +A LG+ + RL D YG+E+TSMLTVQYRMHEHIM+WSSK
Sbjct: 92 DVVALKP--NKADAGSASLGQGVVYRLKDSSITEAYGEEITSMLTVQYRMHEHIMSWSSK 149
Query: 456 QLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEA 505
+LYN+KIKAH S V R+SSTEPT++LID GCDMEE KDEE+STMNEGEA
Sbjct: 150 ELYNNKIKAHSSVAGHMLYDLEEVTRSSSTEPTIVLIDTTGCDMEEVKDEEESTMNEGEA 209
Query: 506 EVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKE 565
V++AHAK L++SGV+ASDIGIITPYAAQV LK++R+KD KLK++E+STVDGFQGREKE
Sbjct: 210 AVSIAHAKLLVESGVNASDIGIITPYAAQVTCLKMMRNKDAKLKDLEISTVDGFQGREKE 269
Query: 566 AIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEH 625
AIIISMVRSNSKKEVGFLSD RRMNVAVTRARRQCCLVCD ETVSSD FLKRL+EYFEE+
Sbjct: 270 AIIISMVRSNSKKEVGFLSDHRRMNVAVTRARRQCCLVCDVETVSSDRFLKRLVEYFEEN 329
Query: 626 AEYLSGSEY 634
EYLS SEY
Sbjct: 330 GEYLSASEY 338
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/114 (71%), Positives = 91/114 (79%), Gaps = 4/114 (3%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
+SLQEFVS M PLIDLEK AEISA + A + +++G I NLKC DAQTGLMGKT
Sbjct: 16 MSLQEFVSCMQPLIDLEKAAEISAESETSAK----SLERRGCVIANLKCTDAQTGLMGKT 71
Query: 73 LLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF 126
LLEFQ KGDVLP+HKFGTHDVV LKPNKAD GS +LGQGVVYRLKDSSIT A+
Sbjct: 72 LLEFQPNKGDVLPSHKFGTHDVVALKPNKADAGSASLGQGVVYRLKDSSITEAY 125
>gi|164661533|ref|XP_001731889.1| hypothetical protein MGL_1157 [Malassezia globosa CBS 7966]
gi|159105790|gb|EDP44675.1| hypothetical protein MGL_1157 [Malassezia globosa CBS 7966]
Length = 721
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 230/643 (35%), Positives = 354/643 (55%), Gaps = 88/643 (13%)
Query: 51 KKGSTILNLKCVDAQTGLMGKTLLEFQSTKG----DVLPAHKFGTHDVVVLKPNKADLGS 106
+ G +L L ++TG GK L+E Q + VL H F DV L+ +++ +
Sbjct: 52 RHGLALLGLFVASSRTGEGGKLLVELQYSTALHASPVLGPHTFRPGDVCALEEHESSKAT 111
Query: 107 PALG--QGVVYRLKDSSITVAFDDIP------EEGLNSPLRLEKLANEVTYRRMKDALIQ 158
+ VVYR+ ++SI +A D+ E L +R+ +LANE TY R+ + L
Sbjct: 112 SCTLSLRAVVYRVSETSIILALDERSASHEDHETDLPPLIRIVQLANEATYDRLVETLES 171
Query: 159 LSKGV-----QNGPAAGL---------IPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
L++ + Q+ PA L + L G + P K+ A+ P +L+ +Q+ A
Sbjct: 172 LARVMGLPTQQDVPAPELELSAHAPRVVRSLLGLETPAWRKETPAWIPIQPHLNDTQRGA 231
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQ--EVKRGSKILACAASNIAVDNIVER--- 259
IS AL S+++ ++HGPPGTGKTT V E+I+Q + ++IL C ASN+AVDN++ER
Sbjct: 232 ISFALRSEHLALIHGPPGTGKTTAVAELIVQLATLDPKARILVCGASNLAVDNLLERITS 291
Query: 260 ------LVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
L R+ R+GHPAR+LP + + LD Q + L D+ E+ L +L+
Sbjct: 292 PAYKDALARADARVTRIGHPARVLPSLTSATLDVQSRQSSEGQLVRDVAAEIDELMQRLV 351
Query: 314 KTKD---------KNT-------RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTL 357
+ +N RR++ +++R L KE R+R + V+KNA ++++T
Sbjct: 352 PPRTGARAGNKSARNIPRVKGLERRKMWEQVRELRKEYRRRDRALSNTVLKNARIIMSTC 411
Query: 358 TGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLK---GSRCILAGDHLQLPPTVQSVEA 414
GA +R+LD+ FD+ IIDEA QALE++CW +L+ R L+GDHLQLPPTV + +A
Sbjct: 412 HGAGARQLDDMQFDVCIIDEACQALEMSCWTPVLRLAPHGRVFLSGDHLQLPPTVMA-DA 470
Query: 415 EKKGLGR-----------TLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK 463
+ G T+F+R+ D+YG+ + L+VQYRM+ IM + + QLY ++
Sbjct: 471 PRLPAGSGTLRPSASLEVTMFDRILDMYGEGCKAFLSVQYRMNREIMAFPNSQLYKGQLV 530
Query: 464 AHPS---------GVKRTSS---TEPTLLLIDIAGCDMEEKKDEE----DSTMNEGEAEV 507
AH S GV+ P L+L D G M E++DE S +NE E +
Sbjct: 531 AHESCASIRLTDLGVEGDDDDLFCAP-LVLYDTTGAGMYEREDEAVLSTHSRVNENEVAL 589
Query: 508 AMAHAKRLIQSGVHASDIGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEA 566
+ H + L++ G+ I +++PY+AQV LL + +RS +EV TVDG QGREKE
Sbjct: 590 VLRHMELLVEHGIAPESIAVLSPYSAQVHLLSQQIRSAYGA--RVEVGTVDGMQGREKEV 647
Query: 567 IIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
+I+S+VRSN + ++GFL D RR+NVA+TRA+RQ +V D +TV
Sbjct: 648 VIVSLVRSNDEHQIGFLQDSRRLNVAMTRAKRQLVIVGDADTV 690
>gi|254167906|ref|ZP_04874755.1| DNA helicase, putative [Aciduliprofundum boonei T469]
gi|289596630|ref|YP_003483326.1| DNA helicase [Aciduliprofundum boonei T469]
gi|197623197|gb|EDY35763.1| DNA helicase, putative [Aciduliprofundum boonei T469]
gi|289534417|gb|ADD08764.1| DNA helicase [Aciduliprofundum boonei T469]
Length = 655
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 235/669 (35%), Positives = 362/669 (54%), Gaps = 77/669 (11%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
++ ++S + LI+LE+E E+ + +K G ILNLK GL G L
Sbjct: 5 NIDSYISYFSKLINLEREEEMRRHWEEIKKLSGKKREKLGRAILNLKGKFIGRGLGGAYL 64
Query: 74 LEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEG 133
++F ++ D +P ++ D+V++ K SP Q VY I ++F P +
Sbjct: 65 VKF--SRKD-MPENEIMVGDIVIVSIGKV---SPKNPQATVYEKGKRYIILSFSKRPPKF 118
Query: 134 LNS-PLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKP 192
+ S +R++ AN++T++RM AL + +++ L +L G P + K + K
Sbjct: 119 VYSRGVRIDLYANDITFQRMLSAL----QSLKDENKLRLRAILLGNANPELCK--VGIKL 172
Query: 193 FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIA 252
N L++ Q+ A+ + S+ +F++HGPPGTGKTTT+ E I+Q VK+G ++LA A SN+A
Sbjct: 173 ENRRLNNFQRKAVESLIGSE-LFLIHGPPGTGKTTTLAEGIIQMVKKGYRVLATADSNVA 231
Query: 253 VDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKL 312
VDN+VE+L H+V +VR+GHPAR+ ++E LD V + A +I +++ + +
Sbjct: 232 VDNLVEKLA-HKVNVVRVGHPARIGKSIIEHTLDYIVAQDIEYKKAMEIWEKIDDMRAEQ 290
Query: 313 LKTKDK-----------------NTRR-----------------EIQKELRTLSKEERKR 338
K K N R +IQ+ + K+ +K
Sbjct: 291 EKYKKPTPQWRRGMGDDEIVYLANASRSYRGVPVEIMKNMAQWIKIQRRIEEYVKKAKKM 350
Query: 339 QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCIL 398
++ + V+KNADV+ TT + A S L N FD V+IDEA Q++E +C I ++KG R I+
Sbjct: 351 EEKVIKRVLKNADVICTTNSTAGSELLYNMDFDFVVIDEATQSIEPSCLIPMIKGDRYIM 410
Query: 399 AGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLY 458
AGDH QLPPT+ S +A K L TLFER LY ++ L VQYRM+E IM + SK Y
Sbjct: 411 AGDHRQLPPTIMSYKA--KALQLTLFERFIKLY-PHLSITLRVQYRMNEKIMKFPSKLFY 467
Query: 459 NSKIKAHPS---------GVKRTSSTEP---------TLLLIDIAGCDMEEKKDEEDSTM 500
+ AHPS GV + EP ++ +D+ C EEK+ S
Sbjct: 468 KDLLIAHPSVKNRSIEDLGVSAENLEEPMRSICEPQSIIVFLDMQNCK-EEKRGGSTSYY 526
Query: 501 NEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQ 560
NE EAE L++ G+ IGIITPY QV LL+ + ++++E+ +VDGFQ
Sbjct: 527 NECEAETVKDTVDCLLKIGLKEKHIGIITPYDDQVDLLRSM------IEDIEIKSVDGFQ 580
Query: 561 GREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
GREK+ IIIS VRSN K ++GFL D RR+NVA+TRA+R+ ++ + +T+SS+ +LI+
Sbjct: 581 GREKDVIIISFVRSNDKGDIGFLDDLRRLNVAITRAKRKLIMLGNAKTLSSNEVYTKLID 640
Query: 621 YFEEHAEYL 629
Y ++L
Sbjct: 641 YTRSEGKFL 649
>gi|395545472|ref|XP_003774625.1| PREDICTED: DNA-binding protein SMUBP-2, partial [Sarcophilus
harrisii]
Length = 780
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 193/409 (47%), Positives = 257/409 (62%), Gaps = 21/409 (5%)
Query: 243 ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR 302
+L CA SN+AVDN+VERL + +++RLGHPARLL + LDA + R D + + +DIR
Sbjct: 1 VLCCAPSNVAVDNLVERLAAQKQKVLRLGHPARLLDAIQHHCLDAVLARSDQAQIVADIR 60
Query: 303 KEMKALNG--KLLKTKDKNTRREIQKELRTLSKEERKRQQ-LAVTDVIKNADVVLTTLTG 359
K++ + G K +KT DK + + EL+ L KE R Q L + D + + G
Sbjct: 61 KDIDRVRGGVKGMKTLDKRDKSYGRNELKLLRKELRGLQNVLGLRDPFEPG----ASPDG 116
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ DN FD+V+IDE AQALE +CWI LLK +C+LAGDH QLPPT+ S +A GL
Sbjct: 117 PLKLLPDNY-FDVVVIDECAQALEASCWIPLLKARKCVLAGDHQQLPPTIVSHQAASGGL 175
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
+L ERL +GD+V MLTVQYRMH+ IM W+S +LY+ ++ AH S GV
Sbjct: 176 ALSLMERLIAKHGDKVVRMLTVQYRMHQAIMQWASDELYHGQLTAHSSVAGHLLKDLPGV 235
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T T LLLID AGC + E +DE E S N GE + H + L+ +GV D+ +I
Sbjct: 236 VPTEETSIPLLLIDTAGCGLFELEDEDEQSRGNPGEVRLVSLHVQALVDAGVRVGDMAVI 295
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
TPY QV LL+ S K +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR
Sbjct: 296 TPYNLQVDLLRQQLSP--KYPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRR 353
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+NVAVTRARR +VCD+ T+ SD FLKRL++YF E + EYL++
Sbjct: 354 INVAVTRARRHVAVVCDSRTIGSDAFLKRLVDYFTLRGEVRTAFEYLDD 402
>gi|426194030|gb|EKV43962.1| hypothetical protein AGABI2DRAFT_145440 [Agaricus bisporus var.
bisporus H97]
Length = 738
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 252/710 (35%), Positives = 359/710 (50%), Gaps = 151/710 (21%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPAL 109
++KG ++ L + GL GKT GD+ + + KP K +G +
Sbjct: 41 EQKGLSLGGLGVANINIGLGGKT-------PGDLARIEPNVSGNAPAKKPKKTPVGDEKV 93
Query: 110 GQ---GVVYRLKDSSITVAFDDIPEEG----LNSP--LRLEKLANEVTYRRMKDALIQLS 160
Q GVVY++ D+ I +A D P EG LN P R+ KLAN VTY RM A+ +L
Sbjct: 94 QQEAEGVVYKVSDTRIVIAID--PAEGSSDDLNLPERCRVVKLANSVTYDRMDKAIDRLE 151
Query: 161 KGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGP 220
K V+ VL G P+ A F+ +L+ SQK+AI L S V +HGP
Sbjct: 152 KIVEGRS------VLLGIHPPSERNHISAIAFFDDSLNESQKEAIKFCLESPEVACIHGP 205
Query: 221 PG------------------TGKTTTVVEIILQEVK------RGSKILACAASNIAVDNI 256
PG TGKT T++E+I Q ++L C ASN++VDNI
Sbjct: 206 PGLLTTRRVAHANVSKIQTGTGKTHTLIEVIRQLTTVTPSNLTPKRVLVCGASNLSVDNI 265
Query: 257 VERLVP-------HRVRLVRLGHPARLLPQ--VLESALDAQVLRGDNSSLASDIRKEMKA 307
+ERL+ ++++ R+GHPAR++ +L+S L+ Q R D ++LA D++ E++A
Sbjct: 266 MERLLALPASEKGEKLKVTRIGHPARVMSHQGILDSTLEVQATRTDQAALAKDVKNELEA 325
Query: 308 -LNGKLLKTKDKNT---------RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTL 357
LN LL K K R+++ +E++ L KE R+R+ V V+ A VVL+T
Sbjct: 326 TLN--LLSGKGKGAKGKPPRGVERKKLWEEVKALRKEYRQREGGVVKSVLSEAQVVLSTC 383
Query: 358 TGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAE-- 415
+ R+L + FD+VIIDEA QALE CWI + K + ILAGD +QLPPT+ S+ E
Sbjct: 384 HTSGGRQLQSHDFDVVIIDEATQALEAVCWIPIFKARKLILAGDPMQLPPTIISINQETE 443
Query: 416 -----------KKG---------------------------------------------L 419
KKG L
Sbjct: 444 SKTMKRATQTSKKGSKVAAKDPSSSPDPEDKAESPGDDMPKVNVPATRKPQPVLLPPHTL 503
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSG 468
TLF+RL +YG + ML VQYRMH I + S+ LY+SK+++H P+
Sbjct: 504 ETTLFDRLEQMYGPRIKRMLQVQYRMHAQICEFPSETLYSSKLRSHESVTSHLLDDLPNA 563
Query: 469 VKRTSSTEPTLL-----LIDIAGCDMEEKKD----EEDSTMNEGEAEVAMAHAKRLIQSG 519
+ LL D AGC+ E+ + +E S NE EA V +LI +G
Sbjct: 564 SAESEDDSKELLQTPVVFFDTAGCEYFERVNSTDGDEGSRSNENEATVVSNWVDKLIGAG 623
Query: 520 VHASDIGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK 578
+ +S I IITPY AQV LL ++R K +E+ TVDG QGREKEAIIIS+VRSN +
Sbjct: 624 IDSSQIAIITPYQAQVTLLTSLIRPKYGS--ELEIGTVDGMQGREKEAIIISLVRSNDTR 681
Query: 579 EVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE 627
EVGFL ++RR+NVA+TRARR C+V D+ TV+ G +LK+ + + + +A+
Sbjct: 682 EVGFLKEKRRLNVAMTRARRHLCIVGDSSTVTHGGAYLKKWVAWLDNNAD 731
>gi|226530450|ref|NP_001146778.1| uncharacterized protein LOC100280381 [Zea mays]
gi|219888715|gb|ACL54732.1| unknown [Zea mays]
Length = 274
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 175/249 (70%), Positives = 201/249 (80%), Gaps = 17/249 (6%)
Query: 401 DHLQLPPTVQSVEAEKKGLGRTLFERLAD-----LYGDEVTSMLTVQYRMHEHIMNWSSK 455
D + L P +A LG+ + RL D YG+E+TSMLTVQYRMHEHIM+WSSK
Sbjct: 25 DVVALKP--NKADAGSASLGQGVVYRLKDSSITEAYGEEITSMLTVQYRMHEHIMSWSSK 82
Query: 456 QLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEA 505
+LYN+KIKAH S V R+SSTEPT++LID GCDMEE KDEE+STMNEGEA
Sbjct: 83 ELYNNKIKAHSSVAGHMLYDLEEVTRSSSTEPTIVLIDTTGCDMEEVKDEEESTMNEGEA 142
Query: 506 EVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKE 565
V++AHAK L++SGV+ASDIGIITPYAAQV LK++R+KD KLK++E+STVDGFQGREKE
Sbjct: 143 AVSIAHAKLLVESGVNASDIGIITPYAAQVTCLKMMRNKDAKLKDLEISTVDGFQGREKE 202
Query: 566 AIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEH 625
AIIISMVRSNSKKEVGFLSD RRMNVAVTRARRQCCLVCD ETVSSD FLKRL+EYFEE+
Sbjct: 203 AIIISMVRSNSKKEVGFLSDHRRMNVAVTRARRQCCLVCDVETVSSDRFLKRLVEYFEEN 262
Query: 626 AEYLSGSEY 634
EYLS SEY
Sbjct: 263 GEYLSASEY 271
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/58 (84%), Positives = 52/58 (89%)
Query: 69 MGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF 126
MGKTLLEFQ KGDVLP+HKFGTHDVV LKPNKAD GS +LGQGVVYRLKDSSIT A+
Sbjct: 1 MGKTLLEFQPNKGDVLPSHKFGTHDVVALKPNKADAGSASLGQGVVYRLKDSSITEAY 58
>gi|218191424|gb|EEC73851.1| hypothetical protein OsI_08612 [Oryza sativa Indica Group]
Length = 979
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 237/682 (34%), Positives = 364/682 (53%), Gaps = 75/682 (10%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITS-GASRNLD-----------------TAQKKGSTI 56
++++V+ M+ L+ +E++ E+ + AS LD + Q++ TI
Sbjct: 278 IEQYVTHMSDLLCIERDVELEFTQEELNASPMLDNDSEPPKPVEYLVSHGQSQQEQCDTI 337
Query: 57 LNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKP-NKADLGSPALGQGVVY 115
NL + + TGL G L+ F+ G LP D+V ++ N G+ + QG VY
Sbjct: 338 CNLNVISSSTGLGGLHLVLFRIEGGHKLPPTTLSPGDMVCVRTCNSRGEGATSCMQGFVY 397
Query: 116 RLKD--SSITVAFDDIPEEGLNSPL--------RLEKLANEVTYRRMKDALIQLSK-GVQ 164
L + SIT+A + + S L R++ LA+ +TY R +ALI L + G+Q
Sbjct: 398 NLGEDGCSITLALESRHGDPTFSRLFGKSVRIDRIQGLADALTYERNLEALIILQRNGLQ 457
Query: 165 NGPAA-GLIPVLFGEQKPTVLKKDIAFKPFNSN------------LDHSQKDAISKALSS 211
A+ G++ LFG+ K + + + + LD SQ A+S L+
Sbjct: 458 KSNASIGVVATLFGDNKDVMKMEQNHLTDWGESSAPDPRISERYALDASQLKALSLGLNK 517
Query: 212 KN-VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRL 270
K V ++ GPPGTGKT + E+I++ V++G +L A SN AVDN+VERL + +VR+
Sbjct: 518 KRPVLIIQGPPGTGKTVLLTELIVRAVQQGENVLVTAPSNAAVDNMVERLSNTGLNIVRV 577
Query: 271 GHPARLLPQVLESALDAQV------LRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
G+PAR+ P V +L V R + SD+RK++ +D + I
Sbjct: 578 GNPARISPSVASKSLAEIVNRRLEQFRKELERKRSDLRKDLSYC------IEDDSLAAGI 631
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS-FDLVIIDEAAQALE 383
++ L+ L ++ K+++ + +V+ A VVL+T TGA + T FDLVIIDEA QA+E
Sbjct: 632 RQLLKQLGRDLEKKEKEMIREVLSEAQVVLSTNTGAADPLIRRTCCFDLVIIDEAGQAIE 691
Query: 384 IACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQY 443
+CWI +L+G RCILAGDH QL P + S + GLG++L ER + L+ +T+ LTVQ+
Sbjct: 692 PSCWIPILQGKRCILAGDHCQLAPVILSRKVLDGGLGKSLLERASSLHNGLLTTRLTVQH 751
Query: 444 RMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT----------LLLIDI--------A 485
RM++ I +W+SK++Y+ +K+ S +T + P LLL+D
Sbjct: 752 RMNDSIASWASKEMYHGLLKSSHSVASQTLADSPVVKATWITRCPLLLLDTRMPYGALDT 811
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKD 545
GC + S N+GEA++ H L+ GV + I + +PY AQV LL+ +
Sbjct: 812 GCGEQIDLAGTGSFYNDGEADIVTQHVLNLVHCGVSPTAIAVQSPYIAQVQLLRERLEEY 871
Query: 546 DKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCD 605
L +EVST+D FQGRE +A++ISMVRSN VGFL D RRMNVA+TRA R +VCD
Sbjct: 872 PGLSGVEVSTIDSFQGREADAVVISMVRSNPLGAVGFLGDSRRMNVAITRACRHVTVVCD 931
Query: 606 TETVSSDGFLKRLIEYFEEHAE 627
T T+ FL RL+ + + +
Sbjct: 932 TSTICHSTFLARLLRHIRRYGQ 953
>gi|254167856|ref|ZP_04874705.1| DNA helicase, putative [Aciduliprofundum boonei T469]
gi|197623147|gb|EDY35713.1| DNA helicase, putative [Aciduliprofundum boonei T469]
Length = 655
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 235/669 (35%), Positives = 362/669 (54%), Gaps = 77/669 (11%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
++ ++S + LI+LE+E E+ + +K G ILNL GL G L
Sbjct: 5 NIDSYISYFSKLINLEREEEMRRHWEEIKKLSGKKREKLGRAILNLNGKFIGRGLGGAYL 64
Query: 74 LEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEG 133
++F ++ D +P ++ D+V++ K SP Q VY I ++F P +
Sbjct: 65 VKF--SRKD-MPENEIMVGDIVIVSSGKV---SPKNPQATVYEKGKRYIILSFSKRPPKF 118
Query: 134 LNS-PLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKP 192
+ S +R++ AN++T++RM AL + +++ L +L G P + K + K
Sbjct: 119 VYSRGVRIDLYANDITFQRMLSAL----QSLKDENKLRLRTLLLGNANPELCK--VGIKL 172
Query: 193 FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIA 252
N L++ QK A+ + S+ +F++HGPPGTGKTTT+ E I+Q VK+G K+LA A SN+A
Sbjct: 173 ENRRLNNFQKKAVESLIGSE-LFLIHGPPGTGKTTTLAEGIIQMVKKGYKVLATADSNVA 231
Query: 253 VDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKL 312
VDN+VE+L H+V +VR+GHPAR+ ++E LD V + A +I +++ + +
Sbjct: 232 VDNLVEKLA-HKVNVVRVGHPARIGKSIIEHTLDYIVAQDIEYKKAMEIWEKIDNMRAEQ 290
Query: 313 LKTKDK-----------------NTRR-----------------EIQKELRTLSKEERKR 338
K K N R +IQ+ + K+ +K
Sbjct: 291 EKYKKPTPQWRRGMGDDEIVYLANASRSYRGVPVDIMKNMAQWIKIQRRIEEYVKKAKKM 350
Query: 339 QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCIL 398
++ + V+KNADV+ TT + A S L + FD V+IDEA Q++E +C I ++KG R I+
Sbjct: 351 EEKVIKRVLKNADVICTTNSTAGSELLYDMDFDFVVIDEATQSIEPSCLIPMIKGDRYIM 410
Query: 399 AGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLY 458
AGDH QLPPT+ S +A K L TLFER LY ++ L VQYRM+E IM + SK Y
Sbjct: 411 AGDHRQLPPTIMSYKA--KALQLTLFERFIKLY-PHLSITLRVQYRMNEKIMKFPSKLFY 467
Query: 459 NSKIKAHPS---------GVKRTSSTEP---------TLLLIDIAGCDMEEKKDEEDSTM 500
N + AHPS GV + EP ++ +D+ C EEK+ S
Sbjct: 468 NDLLIAHPSVKNRSIEDLGVSAENLEEPMRSICEPQSIIVFLDMQNCK-EEKRRGSTSYY 526
Query: 501 NEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQ 560
NE EA + L++ G+ IGIITPY QV LL+ + ++++E+ +VDGFQ
Sbjct: 527 NECEAGMVKDTVDCLLKIGLKEKHIGIITPYDDQVDLLRSM------IEDIEIKSVDGFQ 580
Query: 561 GREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
GREK+ IIIS VRSN K ++GFL D RR+NVA+TRA+R+ ++ + +T+SS+ +LI+
Sbjct: 581 GREKDVIIISFVRSNDKGDIGFLDDLRRLNVAITRAKRKLIMLGNAKTLSSNEVYAKLID 640
Query: 621 YFEEHAEYL 629
Y ++L
Sbjct: 641 YTRSEGKFL 649
>gi|302306881|ref|NP_983306.2| ACL098Cp [Ashbya gossypii ATCC 10895]
gi|299788730|gb|AAS51130.2| ACL098Cp [Ashbya gossypii ATCC 10895]
Length = 657
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 243/650 (37%), Positives = 356/650 (54%), Gaps = 71/650 (10%)
Query: 31 EAEISASITSGASRNLDTAQ--KKGSTILNLKCVDAQTGLMGKTLLEFQSTKG--DVLPA 86
E + +T+ R L AQ G + L+ + +TG GK E +G D L
Sbjct: 16 EQQQDVEVTARQLRELPLAQLVAAGLAVSRLQLENVRTGYGGKVYAELGPARGLADELVL 75
Query: 87 HKFGTHDVV-VLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLE---- 141
G D+V V P D AL +GVV+R + VA D E G + L+L+
Sbjct: 76 GSTGVGDIVRVFAPKSRD---EAL-EGVVFRCSAQQVVVALD---EGGEAAALQLQSASS 128
Query: 142 ----KLANEVTYRRMKDALIQLSKG---VQNGPAAGLI---PVLFGEQKPTVLKKDIAFK 191
K N VTY+RM+ L +L++ + N A L+ P F Q P ++ + F
Sbjct: 129 VVMVKTVNTVTYKRMESTLRKLAEHGDEISNPIAQYLLCQRP--FHAQPP---EQGVEFH 183
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNI 251
N +L+ SQ+DA++ AL ++ + ++HGPPGTGKT T+VE+I Q RG ++L C SNI
Sbjct: 184 --NPDLNASQRDAVAFALRNE-ISIIHGPPGTGKTHTLVELIRQLYDRGHRVLVCGPSNI 240
Query: 252 AVDNIVERL---VPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKAL 308
AVD ++ERL +P L+R+GHPARLLP L +LD GD S+ DI +E+
Sbjct: 241 AVDTVLERLSRPIPG-AELLRVGHPARLLPGNLAHSLDILAKEGDGGSIVRDIGREINQR 299
Query: 309 NGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNT 368
+ K K R++ +E+R L KE ++R++ V+++I A VV+ TL G+ + L +
Sbjct: 300 IADVRKIKSSRDRKKAWQEVRDLRKELKQRERNVVSELILAARVVVCTLHGSSAYSLCHM 359
Query: 369 S------FDLVIIDEAAQALEIACWIALLKG-----SRCILAGDHLQLPPTVQSVEAE-- 415
FD VIIDE +Q+LE CWI L+ S+ ++AGD+ QLPPTV++ +
Sbjct: 360 YDKCARLFDTVIIDEVSQSLEPQCWIPLISHYQSNISKLVIAGDNKQLPPTVKTEDDAHV 419
Query: 416 KKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS-------- 467
++ L T+F++L YGD+ +L VQYRM+E IM ++S+ LY K+KA
Sbjct: 420 RQVLSTTIFDKLERHYGDQFKKLLDVQYRMNERIMAFASESLYAGKLKAWQGVASQTLAD 479
Query: 468 --GVKRTSSTEPTLLLIDIAGCDMEEKKDEED------STMNEGEAEVAMAHAKRLIQSG 519
GV + T L+ D G D E ++ S NE EA + + H +L
Sbjct: 480 LPGVDESDDTSAPLVWYDTQGDDFPEAEEAAGGPALMASKFNENEAYLVLHHISQLRACN 539
Query: 520 VHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKE 579
V IG+I+PY AQV LLK + L +E+S+VDGFQGREKE I++S+VRSN +
Sbjct: 540 VPQEAIGVISPYNAQVALLKKIIHGQHPL--VEISSVDGFQGREKECIVLSLVRSNDSFD 597
Query: 580 VGFLSDRRRMNVAVTRARRQCCLVCDTETV--SSDGFLKRLIEYFEEHAE 627
VGFL D RR+NVA+TRARRQ C++ + ET+ S FL+ + + EEH+E
Sbjct: 598 VGFLRDERRLNVAMTRARRQLCVIGNMETLERSQSQFLRSWVRWSEEHSE 647
>gi|321473861|gb|EFX84827.1| hypothetical protein DAPPUDRAFT_46313 [Daphnia pulex]
Length = 516
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 214/503 (42%), Positives = 301/503 (59%), Gaps = 37/503 (7%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
S+++FV L++LE++AEI+ S + + Q+KG ILNL ++GL G+T+
Sbjct: 5 SIEDFVIQQLGLLNLERDAEIAESRRLQENISAKQLQEKGVCILNLVVQGIRSGLYGRTI 64
Query: 74 LEFQST-KGDVLPAHKFGTHDVVVLKPNKA--DLGSPALGQGVVYRLKDSSITVAFD--- 127
+ F G LP+ + D+V + PN + L + G+V LK S+I +A D
Sbjct: 65 ITFGCKLAGKELPSSNLSSGDIVGIFPNSSASQLEKDQICSGIVSCLKSSTIEIALDTDC 124
Query: 128 DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQ-------- 179
D + N +L +LAN VTYRR+K L L K Q GPAA LI LFG Q
Sbjct: 125 DNVDLNDNDCYKLLQLANSVTYRRLKVGLNSL-KNYQ-GPAASLINTLFGGQLFSSASLS 182
Query: 180 -KPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK 238
P +L D FN NLDHSQK+A+ AL + V ++HGPPGTGKTTTVVEIILQ VK
Sbjct: 183 LPPVLLGYDNDLVWFNKNLDHSQKEAVEFALKQREVAVVHGPPGTGKTTTVVEIILQTVK 242
Query: 239 RGSKILACAASNIAVDNIVERLVPH-RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSL 297
G ++LACA SN+AVDN++E+LV + V+ +RLGHP R+ + +LDA + + S+
Sbjct: 243 AGGRVLACAPSNVAVDNMLEKLVANSSVKAIRLGHPTRMQEAIQNRSLDAVLSNSEARSI 302
Query: 298 ASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTL 357
+D+R+++ A ++ KTK R I E++ L KE R+R+ AV +V+ +A+V+LTTL
Sbjct: 303 VNDVRRDLDAQLKQITKTK---KRGPIFSEIKNLRKELRERETKAVKEVLSHANVILTTL 359
Query: 358 TGAVS----RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVE 413
T A + L FD V+IDE +Q+ E ACW+AL + R +LAGDH QLPPT+ S E
Sbjct: 360 TSATQEGPLKHLPPDHFDYVVIDECSQSTESACWLALTRAPRVLLAGDHFQLPPTIISPE 419
Query: 414 AEKKGLGRTLFERLADLY--GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
AE+KGLG TL ER+ + G+ MLT QYRMH IM W+S QLY+ K++AHPS
Sbjct: 420 AERKGLGLTLMERIINRKEDGNLCVRMLTTQYRMHRDIMQWASNQLYHGKLEAHPSVASH 479
Query: 472 TSSTEPTLLLIDIAGCDMEEKKD 494
LL+++ G +EE +D
Sbjct: 480 --------LLLELPG--VEENED 492
>gi|302392833|ref|YP_003828653.1| DNA helicase [Acetohalobium arabaticum DSM 5501]
gi|302204910|gb|ADL13588.1| DNA helicase [Acetohalobium arabaticum DSM 5501]
Length = 747
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 248/692 (35%), Positives = 366/692 (52%), Gaps = 93/692 (13%)
Query: 9 KQSAVSLQEFVSVMAPLIDLEKEAE-----ISASITSGASRNLDTAQKKGSTILNLKCVD 63
+Q + ++V+ L+ +E+EAE + SG R ++KG IL+L+ D
Sbjct: 78 RQKIDKINDYVTEFEQLVQMEREAEMKKHELEMKNLSGYER-----EEKGRAILHLRGRD 132
Query: 64 AQTGLMGKTLLEF-QSTKGDVLPAHKFGTHDVVVLKPNKA-DLGSPALGQGVVYRLKDSS 121
GK +++F + +G+ LP + D+V+L N+ +P G V S
Sbjct: 133 QGEAFGGKKVVKFMRQRRGEELPDSEISVGDLVMLSKNQPLRDDNPT---GTVAEKTKYS 189
Query: 122 ITVAFDDIPEEGL-NSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAA-------GLIP 173
ITV FD+ P + LR + N++T++RM DA+ ++ + G A GL
Sbjct: 190 ITVVFDENPPGFIFGKGLRADLYVNDITFQRMLDAITEVEEA--EGRLAELRDKFLGLED 247
Query: 174 VLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII 233
+ F EQ D+ FK N NL+ SQK A+ +A+++++ F++HGPPGTGKT T +EII
Sbjct: 248 IEFAEQD-----SDVEFK--NQNLNQSQKQAVRQAMAAEDFFLVHGPPGTGKTMTSIEII 300
Query: 234 LQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQV---- 289
QE+ ILA A SN AVDN+VERLV V +VR+GHP R+ P + E LD +
Sbjct: 301 RQEIGPDKNILATADSNTAVDNLVERLVRDDVEVVRVGHPVRVTPVLREHTLDYLIEDHP 360
Query: 290 -------LRGDNSSL-------------------ASDIRKEMKALNG----KLLKTKDKN 319
LR + L IR++ + +G L K K+
Sbjct: 361 KYQESLKLRQEADELLDKQDDLTHPSGRWRRGMSNQQIREQAQQGSGARGVPLDKIKEMA 420
Query: 320 TRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAA 379
E+Q+E+ L E + ++ AV D++ ADVV TT + A S LDN DL+++DEA
Sbjct: 421 EWLELQEEIDDLFAEMDQLEEEAVNDLLSTADVVCTTNSTAGSEVLDNFWADLLVVDEAT 480
Query: 380 QALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSML 439
QA E A I L K R +LAGDH QLPPT+ S A+++GL TLFERL D+YG ++ ML
Sbjct: 481 QATEPAVLIPLTKTDRVVLAGDHKQLPPTILSERAKQQGLNYTLFERLIDMYGAKIRQML 540
Query: 440 TVQYRMHEHIMNWSSKQLYNS------KIKAH---------PSGVKRTSST---EPTLLL 481
VQYRM++ IMN+S+++ YN I H P+G + + +
Sbjct: 541 RVQYRMNDLIMNFSNREFYNGLLESADGIGGHTLADLDVSAPNGSRPAEKALVFDQPIAF 600
Query: 482 IDIAGCDMEEK-KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKI 540
D G + E+ K + S N EA++ + A+ Q DI +I PY QV L+
Sbjct: 601 FDTQGMNAPERSKSDSTSVENPIEADLVIEIAEVAKQLDFAEEDIAVIAPYKDQVELI-- 658
Query: 541 LRSKDDK--LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARR 598
DDK L+ +EV+TVDGFQGREKE II+S VRSN +GFL D RR+NV++TRA+R
Sbjct: 659 ----DDKLDLQGVEVNTVDGFQGREKEVIILSFVRSNEYGNIGFLRDLRRLNVSLTRAKR 714
Query: 599 QCCLVCDTETVSSDGFLKRLIEYFEEHAEYLS 630
+ ++ D T++S+ +RLIEY + Y +
Sbjct: 715 KLIMIGDASTITSNEVYERLIEYVTDEGYYYA 746
>gi|374106511|gb|AEY95420.1| FACL098Cp [Ashbya gossypii FDAG1]
Length = 657
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 242/650 (37%), Positives = 357/650 (54%), Gaps = 71/650 (10%)
Query: 31 EAEISASITSGASRNLDTAQ--KKGSTILNLKCVDAQTGLMGKTLLEFQSTKG--DVLPA 86
E + +T+ R L AQ G + L+ + +TG GK E +G D L
Sbjct: 16 EQQQDVEVTARQLRELPLAQLVAAGLAVSRLQLENVRTGYGGKVYAELGPARGLADELVL 75
Query: 87 HKFGTHDVV-VLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLE---- 141
G D+V V P D AL +GVV+R + VA D E G + L+L+
Sbjct: 76 GSTGVGDIVRVFAPKSRD---EAL-EGVVFRCSAQQVVVALD---EGGEAAALQLQSASS 128
Query: 142 ----KLANEVTYRRMKDALIQLSKG---VQNGPAAGLI---PVLFGEQKPTVLKKDIAFK 191
K N VTY+RM+ L +L++ + N A L+ P F Q P ++ + F
Sbjct: 129 VVMVKTVNTVTYKRMESTLRKLAEHGDEISNPIAQYLLCQRP--FHAQPP---EQGVEFH 183
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNI 251
N +L+ SQ+DA++ AL ++ + ++HGPPGTGKT T+VE+I Q RG ++L C SNI
Sbjct: 184 --NPDLNASQRDAVAFALRNE-ISIIHGPPGTGKTHTLVELIRQLYDRGHRVLVCGPSNI 240
Query: 252 AVDNIVERL---VPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKAL 308
AVD ++ERL +P L+R+GHPARLLP L +LD GD S+ DI +E+
Sbjct: 241 AVDTVLERLSRPIPG-AELLRVGHPARLLPGNLAHSLDILAKEGDGGSIVRDIGREINQR 299
Query: 309 NGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNT 368
+ K K R++ +E+R L KE ++R++ V+++I A VV+ TL G+ + L +
Sbjct: 300 IADVRKIKSSRDRKKAWQEVRDLRKELKQRERNVVSELILAARVVVCTLHGSSAYSLCHM 359
Query: 369 S------FDLVIIDEAAQALEIACWIALLKG-----SRCILAGDHLQLPPTVQSVEAE-- 415
FD VIIDE +Q+LE CWI L+ S+ ++AGD+ QLPPTV++ +
Sbjct: 360 YDKCARLFDTVIIDEVSQSLEPQCWIPLISHYQSNISKLVIAGDNKQLPPTVKTEDDAHV 419
Query: 416 KKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS-------- 467
++ L T+F++L YGD+ +L VQYRM+E IM ++S+ LY K+KA
Sbjct: 420 RQVLSTTIFDKLERHYGDQFKKLLDVQYRMNERIMAFASESLYAGKLKAWQGVASQTLAD 479
Query: 468 --GVKRTSSTEPTLLLIDIAGCDMEEKKDEED------STMNEGEAEVAMAHAKRLIQSG 519
GV + T L+ D G D E ++ S NE EA + + H +L
Sbjct: 480 LPGVDESDDTSAPLVWYDTQGDDFPEAEEAAGGPALMASKFNENEAYLVLHHISQLRACN 539
Query: 520 VHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKE 579
V IG+I+PY AQV LLK ++ + +E+S+VDGFQGREKE I++S+VRSN +
Sbjct: 540 VPQEAIGVISPYNAQVALLK--KTIHGQHPLVEISSVDGFQGREKECIVLSLVRSNDSFD 597
Query: 580 VGFLSDRRRMNVAVTRARRQCCLVCDTETV--SSDGFLKRLIEYFEEHAE 627
VGFL D RR+NVA+TRARRQ C++ + ET+ S FL+ + + EEH+E
Sbjct: 598 VGFLRDERRLNVAMTRARRQLCVIGNMETLERSQSQFLRSWVRWSEEHSE 647
>gi|396485924|ref|XP_003842291.1| similar to DNA helicase [Leptosphaeria maculans JN3]
gi|312218867|emb|CBX98812.1| similar to DNA helicase [Leptosphaeria maculans JN3]
Length = 607
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 227/611 (37%), Positives = 321/611 (52%), Gaps = 95/611 (15%)
Query: 12 AVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGK 71
+ + F + L+D E +AE+S + +S + G ILNL +TGL GK
Sbjct: 4 STDIPSFAASQLTLLDAELQAELSETNALLSSHTPTALSRAGLAILNLNVSSVRTGLGGK 63
Query: 72 TLLEF--------QSTKGDVLPAHKFGTHDVVVLKPNKADLGSPAL----------GQGV 113
T++E + K D+ P H D+V ++ + GS +GV
Sbjct: 64 TVVELALDPAVVAKGEKPDI-PEHGIRVGDIVAVQDQPS--GSAKKTEKKELTKKGAEGV 120
Query: 114 VYRLKDSSITVAFD----DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSK-GVQNGPA 168
V R++ ++ V D D+P G L + KLAN+VTY+RM + +L K G Q+
Sbjct: 121 VLRVRRENVEVVLDKEDADVPSGG---KLWIVKLANDVTYKRMNQTMSRLQKFGDQD--Y 175
Query: 169 AGLIPVLFGEQKPTVLKKDI--AFKPF------NSNLDHSQKDAISKALSSKNVFMLHGP 220
+ VLFG+ PT L D+ P + +L+ SQK+AI ALSS+ + ++HGP
Sbjct: 176 TPFMRVLFGQASPTPLPSDLNDPSHPLHKLEWKDQSLNDSQKEAIRFALSSREIALIHGP 235
Query: 221 PGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQV 280
PGTGKT T++E+ILQ +K+ ++L C SNI+VDNIVERL H+V +VRLGHPARLLP V
Sbjct: 236 PGTGKTHTLIELILQLLKQNLRLLVCGPSNISVDNIVERLASHKVPMVRLGHPARLLPSV 295
Query: 281 LESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQ 340
L +LD + ++L D+R EM + KT++ RR+I EL+ L +E R+R++
Sbjct: 296 LNHSLDVLTRTSEAAALVQDVRTEMDGKQASIRKTRNARERRQIYTELKELRQEYREREK 355
Query: 341 LAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL--KGSRCIL 398
V +++ + VVL TL GA L FD+VI+DEA+QALE CWI LL K + +L
Sbjct: 356 GCVNNLVGGSKVVLATLHGAGGFHLKGQEFDVVIVDEASQALEAQCWIPLLWVKAGKLVL 415
Query: 399 AGDHLQLPPTVQSV------------EAEKKG------------------LGRTLFERLA 428
AGDHLQLPPT++S+ + KKG L TLF+RL
Sbjct: 416 AGDHLQLPPTIKSLHFRDKKKTMNNAQDAKKGKDEDAKKTDGTLRIQGMTLETTLFDRLL 475
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEP 477
L+G + MLT QYRMHE IM + + +LY SK+ A P V+ T T
Sbjct: 476 ALHGPGIKRMLTTQYRMHETIMRFPADELYESKLVAADFVKERLLKDLPYEVQDTEDTRE 535
Query: 478 TLLLIDIAGCDMEEKKDEE-------------DSTMNEGEAEVAMAHAKRLIQSGVHASD 524
L+ D G D EK ++E DS NEGEA + H L+Q+GV A D
Sbjct: 536 PLVFWDTQGGDFAEKAEDEGVTGKGGKGMRLGDSKSNEGEAALVKMHVGNLVQAGVKAED 595
Query: 525 IGIITPYAAQV 535
I ++TPY QV
Sbjct: 596 IAVVTPYNGQV 606
>gi|357137188|ref|XP_003570183.1| PREDICTED: DNA-binding protein SMUBP-2-like [Brachypodium
distachyon]
Length = 975
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 227/624 (36%), Positives = 339/624 (54%), Gaps = 47/624 (7%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKP-NKADLGSPA 108
Q++ TI NL + + TGL G L+ F+ G LP D+V ++ N G+ +
Sbjct: 327 QEQCDTICNLNVISSSTGLGGLHLVIFRIEGGHKLPPTTLSPGDMVCVRTCNSRGEGATS 386
Query: 109 LGQGVVYRLKD--SSITVAFDDIPEEGLNSPL--------RLEKLANEVTYRRMKDALIQ 158
QG +Y L + SITVA + + S L R++ LA+ +TY R +AL+
Sbjct: 387 CMQGFLYNLGEDGCSITVALESRHGDPTFSRLFGKSVRIDRIQGLADALTYERNLEALML 446
Query: 159 LSK-GVQNGPAA-GLIPVLFGEQKPTVLKKDIAFKPFNS------------NLDHSQKDA 204
L + G+Q A+ ++ LFG+ K + + + D SQ A
Sbjct: 447 LQRNGLQKSNASISVVATLFGDSKDMMKMEQNCLTDWGELSLPDLRLSERYAFDASQLRA 506
Query: 205 ISKALSSKN-VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
IS L+ K V ++ GPPGTGKT + E+I++ V++G +L A SN AVDN+VERL
Sbjct: 507 ISLGLNKKRPVLVIQGPPGTGKTVLLAELIVRAVRQGENVLVTAPSNAAVDNMVERLSST 566
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT-KDKNTRR 322
+ +VR+G+PAR+ P V +L A+++ G ++ ++ L L +D +
Sbjct: 567 GLNIVRVGNPARISPSVASKSL-AEIVNGRLGQFMKELERKRTNLREDLRDCIEDDSLAA 625
Query: 323 EIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS-FDLVIIDEAAQA 381
I++ L+ L ++ K+++ + +V+ +A VVL+T TGA + FDLVIIDEA QA
Sbjct: 626 GIRQLLKQLGRDMEKKEKETIMEVLSDAQVVLSTNTGAADPHIRKAGCFDLVIIDEAGQA 685
Query: 382 LEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTV 441
+E +CWI +L+G RCILAGDH QL P + S +A + GLG+++ ER + L+ + S L V
Sbjct: 686 IEPSCWIPILQGKRCILAGDHCQLAPAILSRKALEGGLGKSMMERASSLHDGLLNSRLMV 745
Query: 442 QYRMHEHIMNWSSKQLYNSKIK----------AHPSGVKRTSSTEPTLLLID------IA 485
Q+RMH+ I +W+SK++Y+ +K A VK T T LLL+D I
Sbjct: 746 QHRMHDSIASWASKEMYHGLLKSSHSVSSHLLADSPVVKATWITRCPLLLLDTRMPYGIL 805
Query: 486 GCDMEEKKDEED--STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRS 543
D E D S N+GEA++ H L+ GV S I + +PY AQV LL+
Sbjct: 806 NIDCVEHLDPAGTGSFYNDGEADIVTQHVLNLVHCGVSPSAIAVQSPYIAQVQLLREKFE 865
Query: 544 KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLV 603
+ L +E ST+D FQGRE +A++ISMVRSN VGF+ D R MNVA+TRARR +V
Sbjct: 866 EYPGLSGVEASTIDSFQGREADAVVISMVRSNPLGAVGFMGDSRLMNVAITRARRHVTVV 925
Query: 604 CDTETVSSDGFLKRLIEYFEEHAE 627
CDT T+ FL RL+ + H +
Sbjct: 926 CDTSTICHSTFLARLLRHIRRHGQ 949
>gi|302771055|ref|XP_002968946.1| hypothetical protein SELMODRAFT_90782 [Selaginella moellendorffii]
gi|300163451|gb|EFJ30062.1| hypothetical protein SELMODRAFT_90782 [Selaginella moellendorffii]
Length = 827
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 232/620 (37%), Positives = 338/620 (54%), Gaps = 54/620 (8%)
Query: 56 ILNLKCVDAQTGLMGKTLLEFQSTKG-DVLPAHKFGTHDVVVLK-PNKADLGSPALGQGV 113
+ +L V + GL G ++ F+S + LP D+V ++ N+ + + +G
Sbjct: 195 LCDLVAVSSFKGLGGTEVVSFRSKNSQNRLPPTSLSPGDMVCVRVSNRQGIPATECLRGS 254
Query: 114 VYRLKDSS--ITVAFDDIPEEGL------NSPLRLEK---LANEVTYRRMKDALIQLSKG 162
VY+L + I VA +P G +R++K LAN TY R +AL QL K
Sbjct: 255 VYKLCEDGQFIEVA---LPGGGRALMKLSGRSIRIDKIFDLANATTYERNCEALKQLKKV 311
Query: 163 V--QNGPAAGLIPVLFG---EQKPTVLKKD--------IAFKPFNSNLDHSQKDAISKAL 209
++ PAA + VLFG E + KD +A ++ D SQ+ AI L
Sbjct: 312 AVSKDNPAAAIAAVLFGQGEEIEKLARGKDQLEDTHSLLASTLSGASFDKSQRRAIQLGL 371
Query: 210 S-SKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLV 268
S+ V ++ GPPGTGKT V EII+Q V RG K+LA A +N AVDN+V+RL +R+V
Sbjct: 372 DKSRPVAVIQGPPGTGKTNVVTEIIIQAVARGDKVLATAPTNAAVDNLVDRLSDTSLRVV 431
Query: 269 RLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKEL 328
R+G+P R+ P V+ +L ++ + I + AL ++ +D + EI K L
Sbjct: 432 RVGNPVRMSPSVVSKSL-THIVSSELVDFKRSIASDKAALRRASMRCQDGKIKAEIDKNL 490
Query: 329 RTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS-FDLVIIDEAAQALEIACW 387
R L K +K+++ V+ A VVL T GA L T FDL ++DEA QA+E +CW
Sbjct: 491 RRLDKSVKKKEEEIPVGVLAAAQVVLCTSIGAGDPLLRKTGLFDLAVVDEAGQAMEPSCW 550
Query: 388 IALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDE--VTSMLTVQYRM 445
I +L+ SR +LAGD QL PTV S EA GL +L ER + G + +ML VQYRM
Sbjct: 551 IGILRSSRVVLAGDACQLAPTVFSAEAVDGGLATSLMERASTSLGHSAVMNTMLQVQYRM 610
Query: 446 HEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDI--------AGC 487
+E I +W+S ++Y +K PS VK T T +LL+D GC
Sbjct: 611 NEAIASWASSEMYGGLVKTAPSVAKQVLSDSPQVKETWRTRAAMLLLDTRKAFGSLAMGC 670
Query: 488 DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDK 547
+ S N+GEA++ + H K LI SGV AS I + +PY AQV LL+ R ++
Sbjct: 671 EECMDYLGTGSFYNDGEADIVVEHVKALIHSGVPASSIAVQSPYLAQVHLLRA-RLDEES 729
Query: 548 LKNM-EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 606
L ++ + ++D FQGRE +A++ISMVRSN VGFL+D+RR+NVAVTR+R+ +VCD+
Sbjct: 730 LGDIVQTESIDSFQGREADAVVISMVRSNELGVVGFLADKRRINVAVTRSRKHVAIVCDS 789
Query: 607 ETVSSDGFLKRLIEYFEEHA 626
TV S+ FL+RL+++ H
Sbjct: 790 STVGSNPFLRRLLQHIRAHG 809
>gi|357155053|ref|XP_003576992.1| PREDICTED: DNA-binding protein SMUBP-2-like [Brachypodium
distachyon]
Length = 980
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 236/690 (34%), Positives = 367/690 (53%), Gaps = 82/690 (11%)
Query: 5 KTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITS-GASRNLDT--------------- 48
KT+ Q+ + +FV M+ L+ +E++AE+ + A+ D+
Sbjct: 268 KTRLMQTKI--DDFVKKMSDLLHIERDAELEFTQEELNATPKTDSRLKQPLKPVEYLVNH 325
Query: 49 ---AQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKP--NKAD 103
Q++ T+ NL + + GL G L+ F+ LP ++V ++ N+ +
Sbjct: 326 GQAEQEQCDTVCNLNVISSSNGLGGLRLVLFRVEGTHKLPPSTLSPGNMVCVRTCNNRGE 385
Query: 104 LGSPALGQGVVYRLKDS--SITVAFDDIPEEGLNSPL--------RLEKLANEVTYRRMK 153
+G+ + QG V+ L + SITVAF + S R++ LA+ +TY R
Sbjct: 386 VGASCM-QGFVHNLGEDGFSITVAFKSRGGDPTFSKFSGKSVRIDRIQALADGLTYERNC 444
Query: 154 DALIQLS-KGVQNGPAA-GLIPVLFGEQK--------------PTVLKKDIAFKPFNSNL 197
+AL+ L KG+Q A+ G + LFG+++ + + D + +N +
Sbjct: 445 EALMLLQRKGLQKTNASIGAVATLFGDKEDMKMLENNNMADWGESAMPVDGLLEKYNYDF 504
Query: 198 DHSQKDAISKALSSKN-VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNI 256
D SQ AI+ L+ K + ++ GPPGTGKT + +I V++ ++L A SN AVDN+
Sbjct: 505 DASQSHAIALGLNKKRPIVVIQGPPGTGKTGLLSNLIRCAVQQRERVLVTAPSNAAVDNM 564
Query: 257 VERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRG------DNSSLASDIRKEMKALNG 310
VE+L + +VR+G+P+R+ P V +L V R + S++RK++
Sbjct: 565 VEKLSGTGLNIVRVGNPSRISPSVSSKSLGEIVKRSLEKFTQEFQMKKSNLRKDLNHC-- 622
Query: 311 KLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
+D + I++ L+ L K RK++ + +++ NA+VVL+T GA + F
Sbjct: 623 ----IQDDSLAAGIRQRLKKLGKNFRKKENETIKEILSNAEVVLSTNIGAADPLIKGIGF 678
Query: 371 -DLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
DLVIIDEA QA+E +CWI +L+G RCILAGD QL P + S EA + GLG +L +R +
Sbjct: 679 FDLVIIDEAGQAIEPSCWIPILQGKRCILAGDQHQLAPVILSREAMEGGLGISLLQRASS 738
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR----------TSSTEPTL 479
L+ +T+ LT+QYRMHE I +W+S ++Y+ +K+ PS R T T L
Sbjct: 739 LHDGLLTTQLTMQYRMHESIASWASNEMYSGLLKSSPSVASRLLVDYPFIQETWITRCAL 798
Query: 480 LLIDI------AGCDMEEKKD--EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPY 531
LL+D D EE D S N GEA++ + H L+ GV + I + +PY
Sbjct: 799 LLLDTRMPYGSLNIDCEEHLDFAGTGSFYNNGEADIVVQHVLNLVLCGVSPTAIAVQSPY 858
Query: 532 AAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNV 591
AQV LL+ + + +EVST+D FQGRE +A++ISMVRSNS VGFL D RRMNV
Sbjct: 859 IAQVQLLRDTLEEYPEAYGVEVSTIDSFQGREADAVVISMVRSNSLGAVGFLGDSRRMNV 918
Query: 592 AVTRARRQCCLVCDTETVSSDGFLKRLIEY 621
A+TRARR LVCD+ T+ ++ FL RL+ +
Sbjct: 919 AITRARRHVVLVCDSSTICNNAFLARLLRH 948
>gi|242062790|ref|XP_002452684.1| hypothetical protein SORBIDRAFT_04g030630 [Sorghum bicolor]
gi|241932515|gb|EES05660.1| hypothetical protein SORBIDRAFT_04g030630 [Sorghum bicolor]
Length = 981
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 241/683 (35%), Positives = 357/683 (52%), Gaps = 75/683 (10%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISAS-ITSGASRNLD-----------------TAQKKGST 55
S++EFV M+ L+ +E++ E+ + + A LD Q++ T
Sbjct: 279 SIEEFVRHMSDLLRIERDVELEFTQLELNAVPMLDDDSKPPKPVEYLVSHGQAQQEQCDT 338
Query: 56 ILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKP-NKADLGSPALGQGVV 114
I NL + + TGL G L+ F+ G LP D+V ++ N G+ + QG V
Sbjct: 339 ICNLNVISSSTGLGGLHLVLFRVEGGHKLPPTTLSPGDMVCVRTCNSRGEGATSCKQGFV 398
Query: 115 YRLKD--SSITVAFDDIPEEGLNSPL--------RLEKLANEVTYRRMKDALIQLSK-GV 163
Y L + SITVA + + S L R++ LA+ + Y+R +AL+ L + G+
Sbjct: 399 YNLGEDGCSITVALESRHGDATFSRLFGKSVRIDRIQGLADSLRYKRNLEALMLLERNGL 458
Query: 164 Q-NGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSN------------LDHSQKDAISKALS 210
Q + + ++ LFG+ K V ++ + D SQ A+ L+
Sbjct: 459 QEDNVSIAVVATLFGDSKDVVKMAKNNLTDWDESSGPDLNLSERYAYDASQLRALKLGLN 518
Query: 211 SKN-VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVR 269
K V ++ GPPGTGKT + E+I++ VK+G ++L A SN AVD +VE L + +VR
Sbjct: 519 KKRPVLIIQGPPGTGKTVLLTELIVRAVKQGERVLVTAPSNAAVDKMVESLSRTGLNIVR 578
Query: 270 LGHPARLLPQVLESALDAQV------LRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
+G+P RL P V +L V R + +D+RK+++ +D +
Sbjct: 579 VGNPVRLSPFVASKSLGEIVNCRLRQFRKELERKRTDLRKDLRQC------IEDDSLAAG 632
Query: 324 IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNT-SFDLVIIDEAAQAL 382
I++ L+ L K+ +++ + +V+ +A VVL+T TGA + T SFDLVIIDEA QA+
Sbjct: 633 IRQLLKQLGKDLENKEKETIREVLSDAQVVLSTNTGAADPLVRRTGSFDLVIIDEAGQAI 692
Query: 383 EIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQ 442
E ACWI +L+G RCILAGDH QL P V S +A GLG++L E + L+ +T+ LTVQ
Sbjct: 693 EPACWIPILQGKRCILAGDHCQLAPVVLSRKALDGGLGKSLLETASSLHDGLLTTRLTVQ 752
Query: 443 YRMHEHIMNWSSKQLYNSKIK----------AHPSGVKRTSSTEPTLLLIDI-------- 484
YRMH+ I W+SK++Y+ +K A VK T T LLL+D
Sbjct: 753 YRMHDSIAMWASKEMYHGLLKSSDLVASHLLADSPVVKATWITRCPLLLLDTRMPNGALN 812
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSK 544
GC S NEGEA++ L+ GV S I + +PY AQV LL+ +
Sbjct: 813 IGCKEHLDPAGTGSFYNEGEADIVTQQVLNLVHCGVSPSTIVVQSPYIAQVQLLREKLQE 872
Query: 545 DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
L +EVST+D FQGRE +A+IISMVRSN VGFL D RR+NVA+TRAR+ +VC
Sbjct: 873 YPGLCPVEVSTIDSFQGREADAVIISMVRSNPLGAVGFLGDSRRINVAITRARKHVTVVC 932
Query: 605 DTETVSSDGFLKRLIEYFEEHAE 627
DT T+ FL RL+ + + +
Sbjct: 933 DTSTICHSTFLARLLRHIRRYGQ 955
>gi|169614636|ref|XP_001800734.1| hypothetical protein SNOG_10464 [Phaeosphaeria nodorum SN15]
gi|160702789|gb|EAT81858.2| hypothetical protein SNOG_10464 [Phaeosphaeria nodorum SN15]
Length = 682
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 246/682 (36%), Positives = 350/682 (51%), Gaps = 126/682 (18%)
Query: 29 EKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQ-----STKGDV 83
E A +S+ S SR G ILNL +TGL GKT++E KGD
Sbjct: 28 ETNALLSSHTPSALSR-------AGLAILNLNVSSIRTGLGGKTVVELGLDSAVVAKGDK 80
Query: 84 --LPAHKFGTHDVVVLKPNKADL--------GSPALGQGVVYRLKDSSITVAFD----DI 129
+P H D+V ++ + G+ +GVV +++ ++ V D ++
Sbjct: 81 PDIPEHGIRVGDIVGVQEQPSGSAKKAEKREGAKKGAEGVVLKVRRENVEVVLDKEDGEV 140
Query: 130 PEEG-----LNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVL 184
P G + +R+ KLAN+VTY+RM + +L K + + VLFG+ PT L
Sbjct: 141 PSAGKLWMGADVCVRV-KLANDVTYKRMNQTMTRLQK-FSDQEYTPFMRVLFGQASPTPL 198
Query: 185 KKDIAFKPFNS---------NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQ 235
D+ P N +L+ SQ++AI AL+S+ V ++HGPPGTGKT T++E+ILQ
Sbjct: 199 PPDLN-DPSNPLHKLEWNDPSLNDSQQEAIRFALASREVALIHGPPGTGKTHTLIELILQ 257
Query: 236 EVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNS 295
+K+ ++L C SNI+VDNIVERL H+V +VRLGHPARLLP VL +LD + +
Sbjct: 258 LLKQKLRLLVCGPSNISVDNIVERLASHKVPMVRLGHPARLLPSVLNHSLDVLTRTSEAA 317
Query: 296 SLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLT 355
+L D+RKEM + KT++ RR++ EL+ L KE R+R++ V +++ + VVL
Sbjct: 318 ALVQDVRKEMDDKQNSIRKTRNAKERRQVYTELKELRKEYRERERGCVNNLVSGSKVVLA 377
Query: 356 TLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL--KGSRCILAGDHLQLPPTVQSV- 412
TL GA L FD+VI+DEA+QALE CW+ LL K ++ +LAGDHLQLPPT++S+
Sbjct: 378 TLHGAGGFHLKGQEFDVVIVDEASQALEAQCWVPLLWVKANKLVLAGDHLQLPPTIKSLN 437
Query: 413 -------------------EAEKKG-----LGRTLFERLADLYGDEVTSMLTVQYRMHEH 448
EA K L TLF+RL L+G + MLT QYRMHE
Sbjct: 438 SKESKAAKSKKTEEGAKNAEAPAKPVNGMTLETTLFDRLLALHGPSIKRMLTTQYRMHEK 497
Query: 449 IMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLIDIAGCDMEEKKDEE- 496
IM + S +LY SK+ A P VK T T+ L+ D G D EK +++
Sbjct: 498 IMRFPSDELYESKLVAADFVKDRLLNGLPYDVKDTEDTQEPLVFWDTQGGDFPEKTEDDA 557
Query: 497 -----------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKD 545
DS NE EA + H LI++GV A DI ++TPY AQV
Sbjct: 558 VTKGSKGMSLGDSKSNEAEAALVKLHVNHLIEAGVKAEDIAVVTPYNAQV---------- 607
Query: 546 DKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCD 605
++ +VDGFQGREKEA +I+ S + D NV + +R
Sbjct: 608 ------QLGSVDGFQGREKEA-VITWYPSRTTPLGTVAQDAMHANVHLRGSR-------- 652
Query: 606 TETVSSDGFLKRLIEYFEEHAE 627
FLK +E+ EE+A+
Sbjct: 653 --------FLKSWMEFLEENAD 666
>gi|392572780|gb|EIW65924.1| hypothetical protein TREMEDRAFT_72495 [Tremella mesenterica DSM
1558]
Length = 734
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 257/723 (35%), Positives = 358/723 (49%), Gaps = 119/723 (16%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
S +L F A L+ LE++ E + ++ +++G + L TGL G
Sbjct: 17 SDPTLTTFFDKHASLLKLERDTEEEQTKLLNSNCPPTLLERRGLALGGLGVKGVNTGLGG 76
Query: 71 KTLLEF---QSTKGDV-LPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF 126
KTL++ + D+ LP H F +K D GS +G+VYR+ ++T+A
Sbjct: 77 KTLMQLCRPSAYHTDLKLPTHTFRAK----MKQKDKDEGSV---EGIVYRVTGETVTIAV 129
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGV--------QNGPAAGLIPVLFGE 178
D E L LRL KLAN VT+ RM L +L K V N LI L G+
Sbjct: 130 DGTKEIDLPERLRLLKLANSVTFDRMDKTLERLRKLVLPSQGESPTNAFNMSLINCLLGK 189
Query: 179 QKPTVL------------KKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKT 226
Q+PT L ++++ F F L+ QK+AI L ++ V +HGPPGTGKT
Sbjct: 190 QQPTWLDEIPPRLDQETKQEELMF--FGEKLNEVQKEAIRFCLKAEYVACIHGPPGTGKT 247
Query: 227 TTVVEIILQ--------EVKRGSKILACAASN------------IAVDNIVERLVPHRVR 266
T+VE+I +IL SN +A ++P R
Sbjct: 248 HTLVELIFHLLSRPASPSSSLPPRILVTTPSNLALDNLLLRLHALAQHPPYSSVLP-RGS 306
Query: 267 LVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDK------NT 320
++R+GHP R+ ++ LD + G++ SL DI KE+ G L + K +
Sbjct: 307 ILRIGHPTRVHRDLVSETLDYRAANGEDGSLLRDIGKELDGHLGDLARKKGERGAVKGKE 366
Query: 321 RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQ 380
R + +E+R L KE R+R+ VT+V+ A VVL T A SR+L NT FD+ IIDEA Q
Sbjct: 367 RGKKWEEIRELRKEYRQREGKVVTNVVNRAMVVLATCHSAGSRQLANTIFDVCIIDEATQ 426
Query: 381 ALEIACWIALLKGSRCILAGDHLQLPPTVQ----------------------SVEAEKKG 418
A+E CW+ +LK + ILAGD QL PT+ S E K
Sbjct: 427 AVEAVCWVPILKSKKVILAGDPQQLRPTIMSKPGKTVKQPIIAPSPEEIATISTELTKVD 486
Query: 419 LGR-----------TLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS 467
+ R TLF+RL LYG + +L VQYRM+ HI ++ S LY K+ A S
Sbjct: 487 IARPTLTPPRTLETTLFDRLERLYGPGIKQVLQVQYRMNAHIASFPSSALYEGKLVADQS 546
Query: 468 GVKRT-------SSTEP--------TLLLIDIAGCDMEEKKDEED------STMNEGEAE 506
T + EP T++ D AGC+ EK + D S MNE EA
Sbjct: 547 VALHTLLDLPDVKADEPDAKETLGETVVFFDTAGCEYYEKDEGGDNGLGEGSKMNENEAV 606
Query: 507 VAMAHAKRLIQSGVHASDIGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKE 565
V A+RLI SG+ +DIGIITPY AQV LL +LR D M + TVDG QG+E+E
Sbjct: 607 VVDKWARRLIASGISPADIGIITPYQAQVSLLSSMLR---DDFPEMTIGTVDGLQGQERE 663
Query: 566 AIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG-FLKRLIEYFEE 624
II+S+VRSNS EVGFL + RR+NVA+TRA+RQ C+V D++TV +LK + + E
Sbjct: 664 VIILSLVRSNSTGEVGFLGEYRRLNVAMTRAKRQLCVVGDSDTVGKGSKYLKSWMTWLEA 723
Query: 625 HAE 627
+A+
Sbjct: 724 NAD 726
>gi|153007203|ref|YP_001381528.1| superfamily I DNA/RNA helicase [Anaeromyxobacter sp. Fw109-5]
gi|152030776|gb|ABS28544.1| superfamily I DNA and RNA helicase [Anaeromyxobacter sp. Fw109-5]
Length = 651
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 219/542 (40%), Positives = 314/542 (57%), Gaps = 21/542 (3%)
Query: 107 PALGQGVVYRLKDSSITVAFDDIPEE-GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQN 165
P +GVV R +SI VAFD+ P + + + LE + VT+ R+ L +L ++
Sbjct: 118 PDAPRGVVARRSRASIAVAFDEPPPDWATDGRVVLELEPSPVTWERLAGGLARL----RD 173
Query: 166 GPAAG-LIPVLFGEQKPTVLKKDIAFKP-FNSNLDHSQKDAISKALSSKNVFMLHGPPGT 223
PA PVL G P + A P S L+ Q A+ A + ++ ++HGPPGT
Sbjct: 174 DPAGRRWHPVLAG-TAPRFERA--ARGPVLASVLNAEQAAALDLADRAVDLALVHGPPGT 230
Query: 224 GKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLES 283
GKTT +VE+I + V RG K+LA A SN+AVDN+VERL VR VR+GHPAR+LP VL
Sbjct: 231 GKTTVLVEVIRRAVARGEKVLATAPSNLAVDNLVERLAAAGVRCVRVGHPARVLPAVLSH 290
Query: 284 ALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDK------NTRREIQKELRTLSKEERK 337
L+A + + +A + +E AL + + K + RE +++ R L E R
Sbjct: 291 TLEALTESHEAARIARGLVEEAIALRRSAARRRQKRGPGRFSASREQERDARALFAEART 350
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCI 397
+ A +V+ A+VVL+TLTG + L F L + DEA QA+E A ++ALL+ R +
Sbjct: 351 LEARAEGEVLDRAEVVLSTLTGLDAPPLARRRFTLAVADEATQAVEPALYLALLRAERAV 410
Query: 398 LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQL 457
LAGDHLQLPPTV S A+ GLG +LFERL L+GD + L Q+RM+ IM + S+ L
Sbjct: 411 LAGDHLQLPPTVLSGAAQAGGLGVSLFERLVALHGDAIKVTLAEQHRMNARIMAFPSEAL 470
Query: 458 YNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLI 516
Y ++AHP+ +R P L ++D AG EE+ E DS N GEA + + L+
Sbjct: 471 YGGALRAHPAVAERAIDGAP-LEVVDTAGRGFEEETPEGSDSKQNAGEAALVAGEVEALL 529
Query: 517 QSGVHASDIGIITPYAAQVVLLK-ILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSN 575
G+ +++ +I+PY AQV L+ +L + D + +EV TVDGFQGREK+A+++S+VR+N
Sbjct: 530 AQGLDPAEVAVISPYDAQVQRLRQLLAAHLD--RGLEVDTVDGFQGREKDAVVVSLVRAN 587
Query: 576 SKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
EVGFL+D RRMNVA+TRAR + +V D TV+ F R + + E + S E
Sbjct: 588 ETGEVGFLADVRRMNVALTRARMKLVVVGDGATVARHPFYARFLSHAEASGAWRSAWERT 647
Query: 636 NE 637
E
Sbjct: 648 RE 649
>gi|356501783|ref|XP_003519703.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max]
Length = 928
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 245/711 (34%), Positives = 378/711 (53%), Gaps = 90/711 (12%)
Query: 1 MEGRKTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASI-----------TSGASRNLD-- 47
M+ K K Q + EF S M+ L+ +E++AE+ + TS +S+ +D
Sbjct: 219 MDFEKVKTIQHRI--DEFTSHMSELLRIERDAELEFTQEELDAVPKPDDTSDSSKPIDFL 276
Query: 48 -----TAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKP-NK 101
Q+ TI NL + GL G L+ F+ LP D+V ++ +
Sbjct: 277 VSHSQPQQELCDTICNLNAISTSRGLGGMHLVLFKVEGNHRLPPTALSPGDMVCVRTYDS 336
Query: 102 ADLGSPALGQGVVYRLKDS--SITVAFDDIPEEGLNSPL--------RLEKLANEVTYRR 151
+ + QG V D SITVA + + S L R++ LA+ +TY R
Sbjct: 337 TGAITTSCIQGFVNSFGDDGYSITVALESRHGDPTFSKLFGKSVRIDRIQGLADTLTYER 396
Query: 152 MKDALIQLSKG--VQNGPAAGLIPVLFGEQKPTVL----------KKDIAFKPFNSNLDH 199
+AL+ L K + P+ ++ LFG+ + ++++ + N D
Sbjct: 397 NCEALMLLQKNGLRKKNPSISVVATLFGDGEDVAWLEKNQLVDWAEENLDARLGNETFDD 456
Query: 200 SQKDAISKALSSKN-VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVE 258
SQ+ AI+ L+ K V ++ GPPGTGKT + ++I+ V++G ++L A +N AVDN+VE
Sbjct: 457 SQQRAIAMGLNKKRPVLVIQGPPGTGKTGLLKQLIVCAVQQGERVLVTAPTNAAVDNMVE 516
Query: 259 RLVPHRVRLVRLGHPARLLPQV----LESALDAQV--LRGDNSSLASDIRKEMKALNGKL 312
+L + +VR+G+PAR+ V LE ++A++ R + SD+RK+++
Sbjct: 517 KLSNVGLNIVRVGNPARISKTVGSKSLEEIVNAKLASFREEYERKKSDLRKDLRHC---- 572
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS---RKLDNTS 369
KD + I++ L+ L + +K+++ V +V+ +A VVL T TGA R+LD +
Sbjct: 573 --LKDDSLASGIRQLLKQLGRSLKKKEKQTVVEVLSSAQVVLATNTGAADPLIRRLD--T 628
Query: 370 FDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
FDLV+IDEA QA+E +CWI +L+G RCILAGD QL P + S +A + GLG +L ER A
Sbjct: 629 FDLVVIDEAGQAIEPSCWIPILQGKRCILAGDQCQLAPVILSRKALEGGLGISLLERAAT 688
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKA----------HPSGVKRTSSTEPTL 479
L+ +T+ LT QYRM++ I +W+SK++Y +K+ + VK T T+ L
Sbjct: 689 LHEGILTTRLTTQYRMNDAIASWASKEMYGGLLKSSETVFSHLLVNSPFVKPTWITQCPL 748
Query: 480 LLIDI--------AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPY 531
LL+D GC+ S NEGEAE+ + H LI +GV + I + +PY
Sbjct: 749 LLLDTRMPYGSLSVGCEEHLDPAGTGSLYNEGEAEIVLQHVFSLIYAGVSPTAIAVQSPY 808
Query: 532 AAQVVLLKILRSKDDKLK---NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
AQV ++LR K D+ EV+T+D FQGRE +A+I+SMVRSN+ VGFL D RR
Sbjct: 809 VAQV---QLLRDKLDEFPEAAGTEVATIDSFQGREADAVILSMVRSNTLGAVGFLGDSRR 865
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFE-----EHAEYLSGSEY 634
+NVA+TRAR+ LVCD+ T+ + FL RL+ + +HAE S Y
Sbjct: 866 INVAITRARKHLALVCDSSTICHNTFLARLLRHIRHFGRVKHAEPGSFGGY 916
>gi|190345144|gb|EDK36972.2| hypothetical protein PGUG_01070 [Meyerozyma guilliermondii ATCC
6260]
Length = 701
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 255/706 (36%), Positives = 376/706 (53%), Gaps = 109/706 (15%)
Query: 13 VSLQ-EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGK 71
+SLQ E VS + LE++A+ + +S + K G ++NL +TGL GK
Sbjct: 1 MSLQNELVSDFKAALQLEQQADSELTSEYLSSYSPKKLAKLGLAVVNLVVHGIRTGLGGK 60
Query: 72 TLLEFQ---STKGDVLPAHKFGTH-----DVVVL-------KPNKADLGSPALGQGVVYR 116
L+E S +G+ +F T D+V + +P K S A+ V+ +
Sbjct: 61 LLMELTLDPSVRGE---NTEFSTGSLRVGDIVRIDTMKNSTEPQKDT--SDAV-DAVITK 114
Query: 117 LKDSSITVAF-DDIPEEGL-------NSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPA 168
+ +SI A DD E GL ++ + + KL N +TY+RM AL +LS+ + +
Sbjct: 115 ISSNSIVAAVEDDDNELGLYNNTANESTKIWIVKLTNSITYKRMNSALGKLSE-LNDAKK 173
Query: 169 AGLIPVLFGEQKPTVL---KKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGK 225
+ VL GE +P + K F F+S L+ SQ++AIS AL+S + ++HGPPGTGK
Sbjct: 174 NVIHRVLLGEIEPHISPTPKTQTVF--FDSQLNTSQQNAISFALNSSPITIIHGPPGTGK 231
Query: 226 TTTVVEIILQ-EVKRGSKILACAASNIAVDNIVERLVP-----------------HRVRL 267
T T++E+I Q RG ++L C SNI+VD I+ERL P + +L
Sbjct: 232 TYTLIELIKQLTFNRGERVLVCGPSNISVDTILERLSPAFTEELDTKKKKRKIKGNPEKL 291
Query: 268 VRLGHPARLLPQVLESALDAQV-----LRGDNSSLASDIRKEMKALNGKLLKTKDKNTRR 322
+R+GHPARLL L+ +LD D+ S+ DI ++ ++ KTK RR
Sbjct: 292 IRIGHPARLLNANLQHSLDVMSKTNYGSTNDSKSILQDIETDISDTLKQIKKTKRYGERR 351
Query: 323 EIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS-----------FD 371
+ EL+ L KE R R++ V D++ A VVL+TL G+ S +L + FD
Sbjct: 352 ALYSELKQLKKELRIREKKVVQDLVVGAQVVLSTLHGSGSYELTSIYKDQAFGPEKPLFD 411
Query: 372 LVIIDEAAQALEIACWIAL---LKGSRCILAGDHLQLPPTVQSVEAE------------- 415
+IIDE +Q++E CWI L L R ++AGD++QLPPTV+S E +
Sbjct: 412 TIIIDEVSQSMEPQCWIPLVNHLGFKRLVIAGDNMQLPPTVKSEEKKKREKKEVGDRLKD 471
Query: 416 ---KKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----- 467
K L TLF+RL L G + +L QYRM+ IM + S++LY K+ AH S
Sbjct: 472 LRLKYSLEHTLFDRLIGLGGAKYKQLLDTQYRMNTQIMTFPSRELYGGKLLAHESVADIS 531
Query: 468 -----GVKRTSSTEPTLLLIDIAGCDMEEKKDEED--STMNEGEAEVAMAHAKRLIQSGV 520
V T + D G ++ D++ S NE EAE+ + H RLI +GV
Sbjct: 532 LADMTDVMHNDDTTEVCIWYDTQGQGFNDQTDDDTTGSKYNEHEAELVVQHTHRLIDAGV 591
Query: 521 HASDIGIITPYAAQV-VLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKE 579
A IGIITPY++QV ++ KIL++ +EVSTVDGFQGREKEAI+IS+VRSN + E
Sbjct: 592 TAESIGIITPYSSQVGIIKKILQNP-----AVEVSTVDGFQGREKEAILISLVRSNDEGE 646
Query: 580 VGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG--FLKRLIEYFE 623
+GFL D+RR+NVA+TR +R C++ D E +++ G FL+ + E
Sbjct: 647 IGFLRDKRRLNVAMTRPKRHLCVIGDMELMANSGVKFLQDWASFAE 692
>gi|146423531|ref|XP_001487693.1| hypothetical protein PGUG_01070 [Meyerozyma guilliermondii ATCC
6260]
Length = 701
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 254/706 (35%), Positives = 375/706 (53%), Gaps = 109/706 (15%)
Query: 13 VSLQ-EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGK 71
+SLQ E V + LE++A+ ++ +S + K G ++NL +TGL GK
Sbjct: 1 MSLQNELVLDFKAALQLEQQADSELTLEYLSSYSPKKLAKLGLAVVNLVVHGIRTGLGGK 60
Query: 72 TLLEFQ---STKGDVLPAHKFGTH-----DVVVL-------KPNKADLGSPALGQGVVYR 116
L+E S +G+ +F T D+V + +P K S A+ V+ +
Sbjct: 61 LLMELTLDPSVRGE---NTEFSTGSLRVGDIVRIDTMKNSTEPQKDT--SDAV-DAVITK 114
Query: 117 LKDSSITVAF-DDIPEEGL-------NSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPA 168
+ +SI A DD E GL ++ + + KL N +TY+RM AL +LS+ + +
Sbjct: 115 ISSNSIVAAVEDDDNELGLYNNTANESTKIWIVKLTNSITYKRMNSALGKLSE-LNDAKK 173
Query: 169 AGLIPVLFGEQKPTVL---KKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGK 225
+ VL GE +P + K F F+S L+ SQ++AIS AL+S + ++HGPPGTGK
Sbjct: 174 NVIHRVLLGEIEPHISPTPKTQTVF--FDSQLNTSQQNAISFALNSSPITIIHGPPGTGK 231
Query: 226 TTTVVEIILQ-EVKRGSKILACAASNIAVDNIVERLVPHRV-----------------RL 267
T T++E+I Q RG ++L C SNI+VD I+ERL P +L
Sbjct: 232 TYTLIELIKQLTFNRGERVLVCGPSNISVDTILERLSPAFTEELDTKKKKRKIKGNPEKL 291
Query: 268 VRLGHPARLLPQVLESALDAQV-----LRGDNSSLASDIRKEMKALNGKLLKTKDKNTRR 322
+R+GHPARLL L+ +LD D+ S+ DI ++ ++ KTK RR
Sbjct: 292 IRIGHPARLLNANLQHSLDVMSKTNYGSTNDSKSILQDIETDISDTLKQIKKTKRYGERR 351
Query: 323 EIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS-----------FD 371
+ EL+ L KE R R++ V D++ A VVL+TL G+ S +L + FD
Sbjct: 352 ALYSELKQLKKELRIREKKVVQDLVVGAQVVLSTLHGSGSYELTSIYKDQAFGPEKPLFD 411
Query: 372 LVIIDEAAQALEIACWIAL---LKGSRCILAGDHLQLPPTVQSVEAE------------- 415
+IIDE +Q++E CWI L L R ++AGD++QLPPTV+S E +
Sbjct: 412 TIIIDEVSQSMEPQCWIPLVNHLGFKRLVIAGDNMQLPPTVKSEEKKKREKKEVGDRLKD 471
Query: 416 ---KKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----- 467
K L TLF+RL L G + +L QYRM+ IM + S++LY K+ AH S
Sbjct: 472 LRLKYSLEHTLFDRLIGLGGAKYKQLLDTQYRMNTQIMTFPSRELYGGKLLAHESVADIS 531
Query: 468 -----GVKRTSSTEPTLLLIDIAGCDMEEKKDEED--STMNEGEAEVAMAHAKRLIQSGV 520
V T + D G ++ D++ S NE EAE+ + H RLI +GV
Sbjct: 532 LADMTDVMHNDDTTEVCIWYDTQGQGFNDQTDDDTTGSKYNEHEAELVVQHTHRLIDAGV 591
Query: 521 HASDIGIITPYAAQV-VLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKE 579
A IGIITPY++QV ++ KIL++ +EVSTVDGFQGREKEAI+IS+VRSN + E
Sbjct: 592 TAESIGIITPYSSQVGIIKKILQNP-----AVEVSTVDGFQGREKEAILISLVRSNDEGE 646
Query: 580 VGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG--FLKRLIEYFE 623
+GFL D+RR+NVA+TR +R C++ D E +++ G FL+ + E
Sbjct: 647 IGFLRDKRRLNVAMTRPKRHLCVIGDMELMANSGVKFLQDWASFAE 692
>gi|294659099|ref|XP_461444.2| DEHA2F25388p [Debaryomyces hansenii CBS767]
gi|202953617|emb|CAG89859.2| DEHA2F25388p [Debaryomyces hansenii CBS767]
Length = 755
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 250/750 (33%), Positives = 385/750 (51%), Gaps = 139/750 (18%)
Query: 11 SAVSLQ-EFVSVMAPLIDLEKEAEI---SASITSGASRNLDTAQKKGSTILNLKCVDAQT 66
+++S+Q E V I+LE ++++ ++ +TS + + L + G I+NL + +
Sbjct: 3 NSISVQNELVESFKNAINLELQSDLLLTNSYLTSYSPKKL---HQLGLAIINLVVTNIKN 59
Query: 67 GLMGKTLLEFQSTK----------------GDVLPAHKF---GTHDVVVLK-----PNKA 102
GL GKT++E + GD++ K T + + K +K
Sbjct: 60 GLGGKTIIELEIDPALKSNDTEIQLGSLRVGDIIKLDKMSNANTSETIQFKKASENSSKK 119
Query: 103 DLGSPALGQ-------GVVYRLKDSSITVAFD-DIPEE--------GLNSPLRLE--KLA 144
G+ G+ V+ R+ ++T++ + D EE N +R+ KL+
Sbjct: 120 KRGTDEEGKCQDESLDAVLIRINSKTVTISIEEDNSEEKVLSLYNNTFNDNIRMWIVKLS 179
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKP---FNSNLDHSQ 201
N +TY+RM A+ +LS+ + + + +I L GE + + K FN NL+ SQ
Sbjct: 180 NSITYKRMTTAMNKLSE-LTSSNKSEIIQYLLGESQYAKKSSGRSLKQKHFFNPNLNTSQ 238
Query: 202 KDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQ-EVKRGSKILACAASNIAVDNIVERL 260
K+AI+ A++ + ++HGPPGTGKT T++E+I Q K+L C SNI+VD I+ERL
Sbjct: 239 KEAINFAINESAITIIHGPPGTGKTYTLIELIKQLTFNNDEKVLVCGPSNISVDTILERL 298
Query: 261 VP--------------------------HRVRLVRLGHPARLLPQVLESALD------AQ 288
P + L+R+GHPARLL L+ +LD
Sbjct: 299 SPIFNEEEVHTDKKKSRRAVKKSTSAGKNPEELIRIGHPARLLGSNLQHSLDILSKTNYD 358
Query: 289 VLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIK 348
DN + DI K++ GK+ K ++ RR + +L+T KE R R++ V D++
Sbjct: 359 TGSNDNKEILKDIEKDISDTLGKVKKCRNYAERRALWSDLKTYKKELRVRERKIVQDLLV 418
Query: 349 NADVVLTTLTGAVSRKL-------------DNTSFDLVIIDEAAQALEIACWIAL---LK 392
A VVL+TL GA S +L D+ FD +IIDE +Q+LE CWI L L
Sbjct: 419 GAKVVLSTLHGAGSYELTSLYKEPTLNFDHDHPLFDTIIIDEVSQSLEPQCWIPLVNHLG 478
Query: 393 GSRCILAGDHLQLPPTVQS------------VEAEKKGLGRTLFERLA-DLYGDEVTSML 439
R ++AGD++QLPPTV+S ++ L TLF+RL D G + +L
Sbjct: 479 CKRLVIAGDNMQLPPTVKSKDDLDALMRKLNIKDGVADLELTLFDRLIRDHNGSQFKKLL 538
Query: 440 TVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDM 489
QYRM+E IM + S +LY+ +KAH S VK T T + D G +
Sbjct: 539 DTQYRMNEDIMRFPSNELYDGNLKAHDSVRSLTLEDLPSVKPTDDTSIPCVWYDTQGGNF 598
Query: 490 EEKKDEED---------STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL-K 539
E+ ++D S N+ E V H + L+Q+G+ +DIG+I+PY AQ LL K
Sbjct: 599 PERASDDDSRAMAESTGSKYNDMEVLVVEQHLQNLLQAGITPADIGVISPYNAQASLLKK 658
Query: 540 ILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 599
L+S+ ++ +EVSTVDGFQGREKEAIIIS+VRSN +E+GFL+DRRR+NVA+TR ++
Sbjct: 659 TLQSR--QIDGIEVSTVDGFQGREKEAIIISLVRSNPNREIGFLADRRRLNVAMTRPKKH 716
Query: 600 CCLVCDTETVSSDG--FLKRLIEYFEEHAE 627
C++ D E +++ G +LK +Y E E
Sbjct: 717 LCIIGDLELMATSGKKYLKNWSQYAENEYE 746
>gi|302816629|ref|XP_002989993.1| hypothetical protein SELMODRAFT_130836 [Selaginella moellendorffii]
gi|300142304|gb|EFJ09006.1| hypothetical protein SELMODRAFT_130836 [Selaginella moellendorffii]
Length = 826
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 232/620 (37%), Positives = 340/620 (54%), Gaps = 54/620 (8%)
Query: 56 ILNLKCVDAQTGLMGKTLLEFQSTKG-DVLPAHKFGTHDVVVLK-PNKADLGSPALGQGV 113
+ +L V + GL G ++ F+S + LP D+V ++ N+ + + +G
Sbjct: 195 LCDLVAVSSFKGLGGTEVVSFRSKNSQNRLPPTSLSPGDMVCVRVSNRQGIPATECLRGS 254
Query: 114 VYRLKDSS--ITVAFDDIPEEGL------NSPLRLEK---LANEVTYRRMKDALIQLSKG 162
VY+L + I VA +P G +R++K LAN TY R +AL QL K
Sbjct: 255 VYKLCEDGQFIEVA---LPGGGRALMKLSGRSIRIDKIFDLANATTYERNCEALKQLKKV 311
Query: 163 V--QNGPAAGLIPVLFG---EQKPTVLKKD--------IAFKPFNSNLDHSQKDAISKAL 209
++ PAA ++ VLFG E + KD +A ++ D SQ+ AI L
Sbjct: 312 AVSKDNPAAAIVAVLFGQGEEIEKLARGKDQLEDTHSLLASTLSGASFDESQRRAIQLGL 371
Query: 210 S-SKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLV 268
S+ V ++ GPPGTGKT V EII+Q V RG K+LA A +N AVDN+V+RL +R+V
Sbjct: 372 DKSRPVAVIQGPPGTGKTNVVTEIIIQAVARGDKVLATAPTNAAVDNLVDRLSDTSLRVV 431
Query: 269 RLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKEL 328
R+G+P R+ P V+ +L ++ + I + AL ++++D + E+ K L
Sbjct: 432 RVGNPVRMSPSVVSKSL-THIVSSELVDFKRSIASDKAALRRTSMRSQDGKIKAEVDKNL 490
Query: 329 RTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS-FDLVIIDEAAQALEIACW 387
R L K RK+++ V+ A VVL T GA L T FDL ++DEA QA+E +CW
Sbjct: 491 RRLDKSMRKKEEEIPAAVLAAAQVVLCTSIGAGDPSLRKTGLFDLAVVDEAGQAMEPSCW 550
Query: 388 IALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDE--VTSMLTVQYRM 445
I +L+ SR +LAGD QL PTV S EA GL +L ER + G +T+ML VQYRM
Sbjct: 551 IGILRSSRVVLAGDACQLAPTVFSAEAVDGGLATSLMERASTSLGHSAVMTTMLQVQYRM 610
Query: 446 HEHIMNWSSKQLYNSKIKAHP----------SGVKRTSSTEPTLLLIDI--------AGC 487
+E I +W+S ++Y +K P VK T T +LL+D GC
Sbjct: 611 NEAIASWASSEMYGGLVKTAPLVAKQVLSDSPQVKETWRTRAAMLLLDTRKAFGSLAMGC 670
Query: 488 DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDK 547
+ S N+GEA++ + H K LI SGV AS I + +PY AQV LL+ R ++
Sbjct: 671 EECMDYLGTGSFYNDGEADIVVEHVKALIHSGVPASSIAVQSPYLAQVHLLRA-RLDEES 729
Query: 548 LKNM-EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 606
L N+ + ++D FQGRE +A++ISMVRSN VGFL+D+RR+NVAVTR+R+ +VCD+
Sbjct: 730 LGNIVQTESIDSFQGREADAVVISMVRSNELGVVGFLADKRRINVAVTRSRKHVAIVCDS 789
Query: 607 ETVSSDGFLKRLIEYFEEHA 626
TV S+ FL+RL+++ +
Sbjct: 790 STVGSNSFLRRLLQHIRAYG 809
>gi|149247810|ref|XP_001528299.1| hypothetical protein LELG_00819 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448253|gb|EDK42641.1| hypothetical protein LELG_00819 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 741
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 223/575 (38%), Positives = 326/575 (56%), Gaps = 65/575 (11%)
Query: 111 QGVVYRLKDSSITVAFDDIPEE--------GLNSPL---RLEKLANEVTYRRMKDALIQL 159
+ VV ++ +ITV+ D+ + N PL + KLAN VTY+RM + ++
Sbjct: 149 EAVVAKVSTLTITVSVDESTSDDKVLNYYNNTNDPLARLWIVKLANSVTYKRMISTVNKV 208
Query: 160 SKGVQNGPAAGLIPVLFGEQKPTVLKKD-----IAFKPFNSNLDHSQKDAISKALSSKNV 214
K +++ + +L GE K + KD + N L+ SQK AI A++ N+
Sbjct: 209 -KELKDNEKNDIHRLLLGETK--YIAKDNGTLGAKMEFHNPGLNDSQKRAIDFAINKSNI 265
Query: 215 FMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRV--RLVRLGH 272
++ GPPGTGKT T++E+I Q G K+L C SNI+VD I+ERL L+R+GH
Sbjct: 266 SIIFGPPGTGKTMTIIELIRQLTDCGEKVLVCGPSNISVDTILERLGDKYKAGDLIRIGH 325
Query: 273 PARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLS 332
PARLLP L+ +LD + + + SD+ +++ GK+ KTK R+ + +EL+ L
Sbjct: 326 PARLLPVNLQHSLDV-ISKSYGRDVISDVENDIQTTLGKIKKTKRYAERKVLYQELKLLK 384
Query: 333 KEERKRQQLAVTDVIKNADVVLTTLTGAVSRKL--DNTSFDLVIIDEAAQALEIACWIAL 390
KE +R++ V ++++NA V+L TL GA S +L N FD +IIDE +Q+LE CWI L
Sbjct: 385 KELIQRERKVVQELLQNAKVILATLHGAGSYELKRSNIKFDTIIIDEVSQSLEPQCWIPL 444
Query: 391 L---KGSRCILAGDHLQLPPTV-----QSVEAEKKG-------------LGRTLFERLAD 429
L R ++AGD++QLPPT+ S ++ K L TLF+RL
Sbjct: 445 LINDNFKRLVIAGDNMQLPPTIMLSGSNSSRSKNKNQDKSNDCSNKTSILETTLFDRLVK 504
Query: 430 -LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHP----------SGVKRTSSTEPT 478
L G++ ++L VQYRM++ IM + S QLY K+K+ SGV++ T
Sbjct: 505 KLDGEKFKTLLDVQYRMNDSIMKFPSMQLYKDKLKSADLVKDISLLDLSGVQKNDDTVLQ 564
Query: 479 LLLIDIAGCDMEEKKDEE----DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ 534
+ D G + E+ E DS NE E + AH K+L++SGV +DIG+I PYAAQ
Sbjct: 565 CIWYDTQGGEFPEQILESVKGGDSKYNEMELLIVKAHIKKLLKSGVQPTDIGVIAPYAAQ 624
Query: 535 VVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
V+LLK D ++ E+STVDGFQGREKE II+++VRSN EVGFLS+ RR+NVA+T
Sbjct: 625 VLLLKKQFGPDSQI---EISTVDGFQGREKEVIILTLVRSNDDNEVGFLSEERRLNVAIT 681
Query: 595 RARRQCCLVCDTETVSSDG--FLKRLIEYFEEHAE 627
R +RQ C++ D +S G FLK +Y E+ E
Sbjct: 682 RPKRQLCVIGDLLLMSQSGHKFLKDWSKYVEDGYE 716
>gi|152990986|ref|YP_001356708.1| DNA/RNA helicase [Nitratiruptor sp. SB155-2]
gi|151422847|dbj|BAF70351.1| DNA/RNA helicase [Nitratiruptor sp. SB155-2]
Length = 726
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 237/691 (34%), Positives = 386/691 (55%), Gaps = 93/691 (13%)
Query: 6 TKEKQSAV-SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKK--GSTILNLKCV 62
++E+++ + + EF LI+ E+ AEI A+I G + L A+++ G IL L+
Sbjct: 58 SREEEAEIKEIHEFCERYRYLINTERRAEIEATI--GEIKALSGAEREIYGRAILGLRG- 114
Query: 63 DAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVL---KPNKADLGSPALGQGVVYRLKD 119
+ + ++F ++ + + G+ D+V++ +P K+D+ G V ++
Sbjct: 115 SKEPSRLNLYFVKFGRSR---IIDTEIGSGDIVLISRGEPLKSDV------TGTVSEVRK 165
Query: 120 SSITVAFDDIPEEGL-NSPLRLEKLANEVTYRRMKD--ALIQLSKGVQNGPAAGLIPVLF 176
+ ITVAF++ P + + +R++ N+VT++RM++ L+Q + GVQ +
Sbjct: 166 NFITVAFEEKPPKWVYGDGIRIDLYINDVTFKRMEENLHLLQHATGVQRR----MRNFAL 221
Query: 177 GEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQE 236
G +P KK +F+ + L+ SQ +A+ KAL S+ VF++HGPPGTGKT+T++E+ILQE
Sbjct: 222 GIWEPKEPKKQ-SFEVV-TKLNESQNEAVQKALGSE-VFLIHGPPGTGKTSTLIELILQE 278
Query: 237 VKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSS 296
VKRG+K+LA A SN AVDN+++RL H + LVR+GHPAR+L ++ E ++ A+ + S
Sbjct: 279 VKRGNKVLATADSNTAVDNMLQRLASHDISLVRIGHPARILYELEEFSIHAKY---EKSL 335
Query: 297 LASDIRKEMKALNGKLLKTKDKNTRR---------------------------------- 322
A I+K + + G L+K ++++++
Sbjct: 336 EAEAIKKGWEEI-GVLVKEREQHSKPTQARARGMSHDRIMTLAARGKSMRGVSVATMQSM 394
Query: 323 ----EIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEA 378
++ +++ +L K R ++ ++I+NADVVL+T +S L N FD+ +IDE
Sbjct: 395 AKWIKLDRKIDSLIKNLRFEEERVYKNIIENADVVLSTNGMIMSDMLKNFHFDVAVIDEG 454
Query: 379 AQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSM 438
+Q + + I ++ +R I+AGDH QLPPTV S + K L +LFE+L Y SM
Sbjct: 455 SQQIIPSTLIPIMHANRFIIAGDHKQLPPTVVS---DSKELKESLFEKLIIQYPKN-ASM 510
Query: 439 LTVQYRMHEHIMNWSSKQLYNSK------IKAH---------PSGVKRTSSTEPTLLLID 483
L +QYRMHE IM +S++Q Y K +K H P + EP L+ +D
Sbjct: 511 LRIQYRMHEKIMQFSNEQFYEGKLIADASVKHHTICDFELKEPKRFEAILGCEP-LVFVD 569
Query: 484 IAGCDMEEKKDEEDSTM-NEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
G + +E + ++ NE EA++ A ++ L+ G+ DIGII+PYAAQV +K L
Sbjct: 570 TKGVEAKEMLAQRSTSYENEKEAKIVSALSEELLSMGLKTEDIGIISPYAAQVKRIKKLV 629
Query: 543 SKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCL 602
D+++ +EV TVDGFQGREKE IIIS VRSN ++GFL D RR+NVA+TRA+R+
Sbjct: 630 ETDERI--IEVKTVDGFQGREKEVIIISFVRSNENGKIGFLKDLRRLNVAITRAKRKLIC 687
Query: 603 VCDTETVSSDGFLKRLIEYFEEHAEYLSGSE 633
+ D T+ D K +EY ++ +Y+ E
Sbjct: 688 IGDASTLIHDETYKAFLEYVKKEGKYIEWEE 718
>gi|148906976|gb|ABR16632.1| unknown [Picea sitchensis]
Length = 691
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 239/682 (35%), Positives = 367/682 (53%), Gaps = 86/682 (12%)
Query: 22 MAPLIDLEKEAEISAS-----------ITSGASRNLD-------TAQKKGSTILNLKCVD 63
M+ L+ +E++AE+ A+ +S + R+++ Q++ TI NL V
Sbjct: 1 MSELLCIERDAELEATQEELDAAPMPDTSSVSPRSIEYLVNHGQPQQEQCDTICNLHAVS 60
Query: 64 AQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLK-PNKADLGSPALGQGVVYRL--KDS 120
+ TGL G L+ F G LP D+V ++ + G+ + QG V+ L +
Sbjct: 61 SSTGLGGMHLVSFSVEGGHRLPPTTISPGDMVCVRICDSRGAGATSCTQGFVHSLCEDEG 120
Query: 121 SITVAFDDIPEEGLNSPL--------RLEKLANEVTYRRMKDALIQLSK-GVQN-GPAAG 170
ITVA + + S L R+ LA+ +TY R +AL+ L K G++ PAA
Sbjct: 121 RITVALESRYGDPTFSKLSCKSLRIDRIHGLADAITYERNCEALMVLQKEGLKKKNPAAA 180
Query: 171 LIPVLFGEQKPTVLKKDIAFKPFNSNLDH-----------------SQKDAISKALS-SK 212
++ LF +DI + P +NL + SQK AIS L+ +
Sbjct: 181 VVATLFEA------GQDI-YWPAENNLQNDAEEDLGEIQLKDFFGDSQKRAISLGLNRQR 233
Query: 213 NVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGH 272
V ++ GPPGTGKT+ + E+I ++G ++L A SN AVDN+VERL + +VR+G+
Sbjct: 234 PVLVIQGPPGTGKTSVLTELICIASRKGERMLVTAPSNAAVDNMVERLADMGLNIVRVGN 293
Query: 273 PARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT-KDKNTRREIQKELRTL 331
P R+ P V +L ++ +S ++ ++ L L KD + I++ L+ L
Sbjct: 294 PVRMSPAVASKSL-GSIVENRLASFRRELARKRDDLKNDLRHCLKDDSLAAGIRQLLKQL 352
Query: 332 SKEERKRQQLAVTDVIKNADVVLTTLTGAVS---RKLDNTSFDLVIIDEAAQALEIACWI 388
K +++++ V +++ NA VVL T TGA RKL SFDLVIIDEA QA+E +CWI
Sbjct: 353 KKTLKRKEEETVNEILSNAQVVLCTNTGAADPLVRKL--ASFDLVIIDEAGQAIEPSCWI 410
Query: 389 ALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEH 448
+L+G R ILAGD+ QL P + S A + GLG +L ER A LY ++ ML+VQYRM++
Sbjct: 411 PILQGKRTILAGDNCQLAPVILSRRAMEGGLGLSLLERAARLYAGGLSHMLSVQYRMNDA 470
Query: 449 IMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDI--------AGCDME 490
I +W+SK++Y +++ P+ +K T T+ LLL+D GC+
Sbjct: 471 IASWASKEMYGGSLQSSPAVASHLLVDSPFIKATWITQCPLLLLDTRMPYGSLSLGCEEH 530
Query: 491 EKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN 550
S NEGEA++ + H + LI +GV DI + +PY AQV LL+ + +
Sbjct: 531 LDLAGTGSFYNEGEADILVQHVRSLIFAGVMPMDIAVQSPYIAQVQLLRERLDQIPEAAG 590
Query: 551 MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS 610
+ V++VD FQGRE +A++ISMVRSN+ VGFL D RR+NVA+TRAR+ +VCD+ T+
Sbjct: 591 IRVASVDSFQGREADAVVISMVRSNTLGAVGFLGDSRRINVAITRARKHVAVVCDSSTIC 650
Query: 611 SDGFLKRLIEYFE-----EHAE 627
+ FL RL+++ HAE
Sbjct: 651 HNTFLARLLKHIRLFGRVRHAE 672
>gi|326800123|ref|YP_004317942.1| ATPase AAA [Sphingobacterium sp. 21]
gi|326550887|gb|ADZ79272.1| AAA ATPase [Sphingobacterium sp. 21]
Length = 630
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 219/576 (38%), Positives = 326/576 (56%), Gaps = 43/576 (7%)
Query: 87 HKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS-SITVAFDDIPEEGLNSPLRLEKLAN 145
H F + V L N + +GQ V Y +++ + + D++P+ + L ++ L +
Sbjct: 71 HHFKSGASVALFSNLGSVNHRIVGQ-VSYLVENRMKVMLRLDELPDWIHDGKLGIDLLFD 129
Query: 146 EVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK--DIAFKPFNSNLDHSQKD 203
E +Y++M++AL++ SK +N LI VL GE++P I+ N+N Q+
Sbjct: 130 EYSYKQMQNALLEASKSSKNP----LIQVLTGERQPVFFSSATPISLDRLNAN----QQL 181
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVE---IILQEVKRGSKILACAASNIAVDNIVERL 260
AI K S+ ++ ++HGPPGTGKTTT++E ++L+E R ++L A SN AVD + ++L
Sbjct: 182 AIEKIRSANDIAIIHGPPGTGKTTTIIEACKVLLKE--RNCQLLVVAPSNTAVDLLTDQL 239
Query: 261 VPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK------EMKALNGKLLK 314
+ ++ + R+G P+R+ P++L + LD Q+ + + IRK EM +
Sbjct: 240 LKAQINVTRIGSPSRVTPELLHATLDEQISQTSSIKEVKKIRKRANQFREMARRYKRNFG 299
Query: 315 TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVI 374
+++ R+ + E L KE +Q A VIKNA V+ TL GA + N F+ VI
Sbjct: 300 KEERIQRQTLFAEAAKLIKEADALEQYATESVIKNAQVITATLVGAGHYSIKNICFEAVI 359
Query: 375 IDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDE 434
IDEAAQALE ACWI +LK + ILAGDH QLPPT++SV A +GL TL E+ LY +
Sbjct: 360 IDEAAQALEPACWIPILKAKKLILAGDHQQLPPTIKSVSAANQGLKETLLEKCIHLY-PQ 418
Query: 435 VTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT--SSTEPTLLLIDIAGCDMEEK 492
ML QYRMH IM++SS++ Y S + AH S V T + L ID GC +E
Sbjct: 419 SGVMLQEQYRMHTSIMSFSSQKFYQSSLIAHNS-VANTLLFPNDQPLQFIDTVGCGFDE- 476
Query: 493 KDEEDSTMNEGEAEVAMAHAKRLIQS-GVHASD-----IGIITPYAAQVVLLKILRSKD- 545
+D+E S N EA + + L S H S I II+PYA+QV K L D
Sbjct: 477 RDDEGSIYNLEEASFVLHYLSMLSTSLSQHYSPENYPRIAIISPYASQVDKFKALLEADP 536
Query: 546 -----DKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
DK+ ++T+DGFQG+E++ +IIS+ RSN ++++GFLSD RRMNVA+TRA+++
Sbjct: 537 LSIYKDKVT---INTIDGFQGQERDIVIISLTRSNQERKIGFLSDIRRMNVAMTRAKKKL 593
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLN 636
+V D+ T+S F LI Y E+ Y S EYLN
Sbjct: 594 VMVGDSLTLSKLPFYADLITYSEKEHAYYSAWEYLN 629
>gi|50546118|ref|XP_500586.1| YALI0B06897p [Yarrowia lipolytica]
gi|49646452|emb|CAG82817.1| YALI0B06897p [Yarrowia lipolytica CLIB122]
Length = 649
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 223/619 (36%), Positives = 348/619 (56%), Gaps = 32/619 (5%)
Query: 19 VSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQ- 77
+S + ++ EK A++++ + +S +G I+NL +TG GK + +
Sbjct: 4 LSHLYTCLEAEKAADVASMSSLTSSLTPKQLASRGLAIVNLTLASLRTGFGGKLVATLEP 63
Query: 78 --STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD---DIPEE 132
S ++ + T D++ + NK A+ + VV + + I VA D D +
Sbjct: 64 DVSISPEITGGNDIRTGDLIKIIKNKTSKDDKAV-EAVVLKSTKAKIEVALDENFDATDS 122
Query: 133 GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKP 192
L + KLAN TYRRM+ AL + + ++ + L+ V ++ + K D +
Sbjct: 123 LDGVRLHVVKLANNATYRRMEFALKDMLR-MKEQEMSDLMRVCVDKETISDHKDDPNLQL 181
Query: 193 FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV-KRGSKILACAASNI 251
+N+ L+ SQ +A+ ++ S V ++HGPPGTGKT T+VEII Q V K+G ++L C SNI
Sbjct: 182 YNTALNPSQVEAVQHSVGSAQVTVVHGPPGTGKTHTLVEIIRQLVQKKGQRVLVCGPSNI 241
Query: 252 AVDNIVERLVPHRV--RLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALN 309
+VD ++ERL PH +L+R+GHPARLL L+ +LD D+ + D++ +
Sbjct: 242 SVDTLLERLHPHFNGNQLLRIGHPARLLEANLQHSLDIVSKTCDSGQIVKDVQVNIDQQL 301
Query: 310 GKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS 369
K+ KTK + + KE+ L KE ++RQ+ V D++ A VV TL G L +
Sbjct: 302 RKISKTKSGREKYAMYKEIGMLRKEFKERQKKVVADLLLQAKVVCATLHGTGDSCLKDVQ 361
Query: 370 FDLVIIDEAAQALEIACWIALLK---GSRCILAGDHLQLPPTVQSVEAE-KKGLGRTLFE 425
FD +IIDE +Q+LE CWI + + + I+AGD+ QLPPTV+ +++ KK L TLF+
Sbjct: 362 FDTIIIDEISQSLEPQCWIPISRYPSAQKLIIAGDNQQLPPTVKCEQSKIKKQLELTLFD 421
Query: 426 RLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEP-------- 477
L Y D + +L VQYRMH+ IM + S++LY ++ AH S + T + P
Sbjct: 422 HLVGNY-DNIRRLLKVQYRMHDAIMQFPSQELYGGQLVAHSSVARHTLADLPHVTEDYET 480
Query: 478 --TLLLIDIAGCDMEEKKDE----EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPY 531
++ ID G D E++DE S +N+ EA + H +L+ GV S+IG+ITPY
Sbjct: 481 TTPVVWIDTQGDDFYEQEDESGKLNPSRLNDSEAYLVRRHVGKLLDLGVLESEIGVITPY 540
Query: 532 AAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNV 591
+AQ L++ L + +EV+TVD FQGREKEA+I+S+VRSN E+GFL + RR+NV
Sbjct: 541 SAQASLIRSLIHPTNPA--VEVATVDSFQGREKEAVILSLVRSNENHEIGFLGEYRRLNV 598
Query: 592 AVTRARRQCCLVCDTETVS 610
A+TR RR C+V + ET++
Sbjct: 599 AMTRPRRHLCVVGNMETLA 617
>gi|356536591|ref|XP_003536820.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max]
Length = 949
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 244/712 (34%), Positives = 376/712 (52%), Gaps = 92/712 (12%)
Query: 1 MEGRKTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASI-----------TSGASRNLD-- 47
M+ K K Q + EF + M+ L+ +E++AE+ + TS +S+ +D
Sbjct: 240 MDFEKVKALQHRI--DEFTTHMSELLRIERDAELEFTQEELDAVPKPDDTSDSSKTIDFL 297
Query: 48 -----TAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKA 102
Q+ TI NL + TGL G L+ F+ LP D+V ++ +
Sbjct: 298 VSHSQPQQELCDTICNLNAISTSTGLGGMHLVLFKVEGNHRLPPTTLSPGDMVCVRTYDS 357
Query: 103 DLG--SPALGQGVVYRLKDS--SITVAFDDIPEEGLNSPL--------RLEKLANEVTYR 150
+G + + QG V D SITVA + + S L R++ LA+ +TY
Sbjct: 358 -MGAITTSCIQGFVNSFGDDGYSITVALESRHGDPTFSKLFGKSVRIDRIQGLADTLTYE 416
Query: 151 RMKDALIQLSKG--VQNGPAAGLIPVLFGEQKPTVLKKDIAFKPF----------NSNLD 198
R +AL+ L K + P+ ++ LFG+ + + + N D
Sbjct: 417 RNCEALMLLQKNGLRKKNPSISVVATLFGDGEDVAWLEKNHLADWAEEKLDGRLGNETFD 476
Query: 199 HSQKDAISKALSSKN-VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIV 257
SQ AI+ L+ K V ++ GPPGTGKT + ++I V++G ++L A +N AVDN+V
Sbjct: 477 DSQWRAIAMGLNKKRPVLVIQGPPGTGKTGLLKQLIACAVQQGERVLVTAPTNAAVDNMV 536
Query: 258 ERLVPHRVRLVRLGHPARLLPQV----LESALDAQV--LRGDNSSLASDIRKEMKALNGK 311
E+L + +VR+G+PAR+ V LE ++A++ R + SD+RK+++
Sbjct: 537 EKLSNVGLNIVRVGNPARISKTVGSKSLEEIVNAKLASFREEYERKKSDLRKDLRHC--- 593
Query: 312 LLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS---RKLDNT 368
+D + I++ L+ L + +K+++ V +V+ +A VV+ T TGA R+LD
Sbjct: 594 ---LRDDSLASGIRQLLKQLGRSLKKKEKQTVIEVLSSAQVVVATNTGAADPLVRRLD-- 648
Query: 369 SFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
+FDLV+IDEA QA+E +CWI +L+G RCILAGD QL P + S +A + GLG +L ER A
Sbjct: 649 TFDLVVIDEAGQAIEPSCWIPILQGKRCILAGDQCQLAPVILSRKALEVGLGISLLERAA 708
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPT 478
L+ +T+ LT QYRM++ I +W+SK++Y +K+ + VK T T+
Sbjct: 709 TLHEGILTTRLTTQYRMNDAIASWASKEMYGGLLKSSETVFSHLLVDSPFVKPTWITQCP 768
Query: 479 LLLIDI--------AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITP 530
LLL+D GC+ S NEGEAE+ + H LI +GV + I + +P
Sbjct: 769 LLLLDTRMPYGSLSVGCEEHLDPAGTGSLYNEGEAEIVLQHVFSLIYAGVSPTAIAVQSP 828
Query: 531 YAAQVVLLKILRSKDDKLK---NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
Y AQV ++LR K D+ EV+T+D FQGRE +A+I+SMVRSN+ VGFL D R
Sbjct: 829 YVAQV---QLLRDKLDEFPEAAGTEVATIDSFQGREADAVILSMVRSNTLGAVGFLGDSR 885
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFE-----EHAEYLSGSEY 634
R+NVA+TRAR+ LVCD+ T+ + FL RL+ + +HAE S Y
Sbjct: 886 RINVAITRARKHLALVCDSSTICHNTFLARLLRHIRHFGRVKHAEPGSFGGY 937
>gi|435853073|ref|YP_007314392.1| DNA helicase, putative [Halobacteroides halobius DSM 5150]
gi|433669484|gb|AGB40299.1| DNA helicase, putative [Halobacteroides halobius DSM 5150]
Length = 750
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 234/653 (35%), Positives = 351/653 (53%), Gaps = 94/653 (14%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEF-QSTKGDVLPAHKFGTHDVVVLKPNK--ADLGS 106
+KKG IL L D G G+ L++F + KG+ LP + D+V+L N+ AD +
Sbjct: 119 EKKGRAILYLSGRDEGQGFGGRELIKFIRQKKGEKLPDTEISVGDLVMLSKNRPLAD-NN 177
Query: 107 PALGQGVVYRLKDSSITVAFDDIPEEGL-NSPLRLEKLANEVTYRRMKDALIQLSKG--- 162
P G V + S+TV FD P L + LRL+ N++T++RM DAL L
Sbjct: 178 PT---GTVVEKTNYSLTVVFDSNPAGFLYDKGLRLDLYVNDITFQRMLDALGNLESATGR 234
Query: 163 --VQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGP 220
V GL V F Q P + +N +L+ SQ+ A+ AL++K+ F++HGP
Sbjct: 235 LKVLRDKLLGLADVEFN-QLPKI-------DYYNKDLNDSQRQAVRSALAAKDFFLVHGP 286
Query: 221 PGTGKTTTVVEIILQEVKRGSK-ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQ 279
PGTGKT T +EI+ QE G K ILA A SN AVDN+VERLV V+++R+GHPAR+
Sbjct: 287 PGTGKTMTSIEILQQEA--GEKNILATADSNTAVDNLVERLVARGVKVLRVGHPARVNSL 344
Query: 280 VLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKN---------TRR-------- 322
V E LD + AS +R + KL K +D N RR
Sbjct: 345 VREYTLDHIIQEHPKYKEASQLRDKAY----KLSKQQDDNPQCIFPSGENRRGFSNQQIR 400
Query: 323 --------------------------EIQKELRTLSKEERKRQQLAVTDVIKNADVVLTT 356
E+Q E+ L + + + AVT++I+ A+VV TT
Sbjct: 401 DLGSKNINGRPRGLSPKKIKGMAKWLELQDEINQLFSQIERLEDEAVTELIEEAEVVCTT 460
Query: 357 LTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEK 416
+ A S L +FDL++IDEA Q+ E A I ++K ++ IL GDH QLPPT+ + EA +
Sbjct: 461 NSTAGSEVLAEQNFDLLLIDEATQSTEPAALIPVVKSNKVILVGDHKQLPPTILNEEAAR 520
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH----------- 465
KGL ++LFERL +++G ++ +L VQYRM++ IMN+SS Q Y+ ++ A
Sbjct: 521 KGLSKSLFERLLEVHGAKIKEILNVQYRMNQAIMNFSSSQFYDQQLVAAKKVKEWNITDL 580
Query: 466 ----PSG---VKRTSSTEPTLLLIDIAGCDMEE-KKDEEDSTMNEGEAEVAMAHAKRLIQ 517
P G ++ + ++ +D +G E K + S N EAE+ + +
Sbjct: 581 NIQLPKGNSPAEKVLKIKDAVVFLDTSGMSAPEYTKGDSTSLQNRIEAELVSEIINQTVN 640
Query: 518 SGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSK 577
+ + S++ +ITPY QV L+K L KL+ +EV+TVDGFQGREKE +I+S+VRSN +
Sbjct: 641 TKIDLSEVAVITPYKDQVDLIKQLI----KLEEVEVNTVDGFQGREKELVILSLVRSNQQ 696
Query: 578 KEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLS 630
+GFL D RR+NV++TRA+++ ++ D+ T++S + L+EY E++ S
Sbjct: 697 DNIGFLRDIRRLNVSLTRAKKKLIILGDSSTITSHETYQSLVEYIEKNGYLYS 749
>gi|327402000|ref|YP_004342839.1| DNA helicase [Archaeoglobus veneficus SNP6]
gi|327317508|gb|AEA48124.1| DNA helicase [Archaeoglobus veneficus SNP6]
Length = 664
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 243/683 (35%), Positives = 372/683 (54%), Gaps = 101/683 (14%)
Query: 18 FVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNL--KCVDAQTGLM-----G 70
++S + L++LE+ AEI + + +++G IL L K + + G
Sbjct: 6 YISRLRKLVELERRAEIESMKEEMRKLSGYERERRGRAILRLNGKVIGREFGYKLVKYGR 65
Query: 71 KTLLEFQSTKGDVLPAHKFGTHDVVVLK--PNKADLGSPALGQGVVYRLKDSSITVAFDD 128
K +E + + GD+ VV+ K P K+DL + + +G Y I V+ D
Sbjct: 66 KERIETEISVGDL----------VVISKGDPLKSDLIATVVEKGTRY------IVVSIDS 109
Query: 129 IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDI 188
IPE L + +R++ AN++T +RM + L +LS+ + L G ++P K +
Sbjct: 110 IPEWALKN-VRIDLYANDITLKRMIENLEKLSES-----GKRTLRFLLGIERPRK-PKAV 162
Query: 189 AFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAA 248
F+PF++ L+ SQ++A+S AL S++ F++HGP GTGKT T+ E+ILQEVKRG+K+LA A
Sbjct: 163 NFEPFDNKLNESQREAVSLALGSRDFFLIHGPFGTGKTRTLTELILQEVKRGNKVLATAE 222
Query: 249 SNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKAL 308
SN+AVDN+VERL +VRLVRLGHP+R+ ++ES++ QV + + + A +R E +
Sbjct: 223 SNVAVDNLVERLA-GKVRLVRLGHPSRISRHLIESSIFFQVEKHERFAKAEKLRDEAE-- 279
Query: 309 NGKLLKTKDK------NTRREIQKELRTLSKEERKRQQLAVTDVIK-------------- 348
KL++ +D + RR + E + E KR + V+K
Sbjct: 280 --KLIRQRDSEVKPSPHWRRGLSDEEIVKAAERGKRFRGIPYRVLKSMAKWIKLNREIQK 337
Query: 349 ------------------NADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIAL 390
++ VVL T + A + + FD+ +IDEA+QA + I +
Sbjct: 338 LLDEAREIEEEIAREIINSSQVVLATNSSAALELIKDVEFDVAVIDEASQATIPSVLIPI 397
Query: 391 LKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIM 450
K R +LAGDH QLPPTV S EA + L TLFE+L + Y E + ML VQYRM++ +M
Sbjct: 398 SKTRRFVLAGDHKQLPPTVLSQEAAE--LSETLFEKLIEAY-PENSKMLEVQYRMNKKLM 454
Query: 451 NWSSKQLYNSKIKAHPS---------GVKRTS--------STEPTLLLIDIAGC--DMEE 491
+ S++ Y ++KA S GVK +EP L+ ID + C E
Sbjct: 455 EFPSREFYGGRLKADDSVRNITLADLGVKEPKFGFWNEVLGSEP-LVFIDTSKCADRWER 513
Query: 492 KKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNM 551
++ S NE EA + +RL++ GV A IG+ITPY QV L+K ++ +
Sbjct: 514 QRKGSPSRENELEARIIKELVERLLKIGVKAGQIGVITPYDDQVDLIK---RYIKGIEEI 570
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
EV TVDG+QGREK+ IIIS VRSN + EVGFL D RR+NV++TRARR+ + DTET+S+
Sbjct: 571 EVKTVDGYQGREKDVIIISFVRSNERGEVGFLDDLRRLNVSLTRARRKLIAIGDTETLST 630
Query: 612 DGFLKRLIEYFEEHAEYLSGSEY 634
+ +R IE+ ++ + +S S +
Sbjct: 631 NETYRRFIEFVKKEGKLVSLSAH 653
>gi|87311458|ref|ZP_01093578.1| DNA-binding protein [Blastopirellula marina DSM 3645]
gi|87285870|gb|EAQ77784.1| DNA-binding protein [Blastopirellula marina DSM 3645]
Length = 687
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 220/609 (36%), Positives = 328/609 (53%), Gaps = 42/609 (6%)
Query: 49 AQKKGSTIL-NLKCVDAQTGLMGKTLLEFQSTKGDV-LPAH--KFGTHDVVVLKPNKADL 104
A GS L L+ D + L G+ + +P H + G+ +V+L N D
Sbjct: 100 ANDPGSLRLKGLRLQDQWSALGGRMICRLTGKNPQARMPMHGLRVGS-PIVLLSHNGEDR 158
Query: 105 GSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQ 164
+GVV R+ +S+ VA + EG L + +E+ +R + A+++ +
Sbjct: 159 A-----RGVVTRVFSTSLEVAIGGL-WEGEEDKLSVAISTDEIARKRQERAMLKAASAC- 211
Query: 165 NGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTG 224
A L VL Q P+ ++D + + L+ SQ+ A+ ALS+++ ++HGPPGTG
Sbjct: 212 GSRTAELRDVLLELQSPSFDERDESLA--SPQLNASQQAAVQLALSARDFSIIHGPPGTG 269
Query: 225 KTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESA 284
KT T+ EI+ V RG K+LACA SN+AVDN+VER ++ VRLGHPAR+ + ++
Sbjct: 270 KTITLAEIVRAAVARGEKVLACAPSNLAVDNLVERFWACGLKAVRLGHPARVSESLHDAL 329
Query: 285 LDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTR--------REIQKELRTLSKEER 336
L+A V ++ LA + E K L + D+ TR R ++ E R L +
Sbjct: 330 LEALVREHPDAKLAEKLVSEAKT----LFRKADRFTRSKPAPGEKRSLRDEARELLDDAA 385
Query: 337 KRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRC 396
+ QQ + ++ +A VV TLTG L FDL +IDEA Q E ACWI + + R
Sbjct: 386 RIQQQTLERLLDDAPVVCCTLTGVDDDLLGARRFDLAVIDEACQTTEPACWIPVSRSQRL 445
Query: 397 ILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQ 456
++AGDH QLPPT+ S EAE G G ++ ERL Y + L +QYRMH HIM +SS +
Sbjct: 446 VIAGDHCQLPPTIVSREAEAAGFGVSMLERLIARY-PQAAQRLELQYRMHAHIMEFSSLE 504
Query: 457 LYNSKIKAHPSGVKRTSSTE---------PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEV 507
Y+ + A PS V+ S T+ + D AG D +E++D+ S N EAE+
Sbjct: 505 FYDGALLADPS-VEAHSLTDLIAADELWAKPVQFFDTAGADYQEEQDDSSSRTNPREAEL 563
Query: 508 AMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAI 567
+ +LI + I +I+PYAAQV LL ++ +E +VDGFQGRE+E +
Sbjct: 564 VVRKVNQLIALEMPPEQIAVISPYAAQVRLL-----RESLPGGVECDSVDGFQGREQEVV 618
Query: 568 IISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAE 627
I S+VRSN K E+GFL+D RRMNVA+TRA+R+ ++ D+ T+ + F R +EY E
Sbjct: 619 ICSLVRSNEKGEIGFLADVRRMNVAMTRAKRKLIVIGDSSTIGGNEFYARFLEYVESMDA 678
Query: 628 YLSGSEYLN 636
Y S E ++
Sbjct: 679 YHSVWEEID 687
>gi|452824984|gb|EME31983.1| DNA helicase, putative [Galdieria sulphuraria]
Length = 907
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 214/599 (35%), Positives = 323/599 (53%), Gaps = 55/599 (9%)
Query: 80 KGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLR 139
KGD + +F H P + + G ++ L++ +I + N +
Sbjct: 89 KGDPI-LFRFQVHSTFHTCPVYRGVLNQLTGDKMILSLREQNIVEKLQE-----YNERVV 142
Query: 140 LEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGE---QKPTVLKKDIAFKPFNSN 196
+ K +T +R AL +L N A + LF E +K V +++ F+P +
Sbjct: 143 VVKDFENITMKRCLKALEELESMDSNHRAYSIRQTLFMENNYEKLFVRPENVEFQP-DPE 201
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNI 256
L+ SQ A + ++HGPPGTGKTTT+V +I + ++RG +L CA SN+AVDN+
Sbjct: 202 LNSSQNQACFMGTWKYPITVIHGPPGTGKTTTLVALIRKLLQRGETLLVCAPSNVAVDNV 261
Query: 257 VERLV---PHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
+E L+ PH + +R+GHPAR ++ + ++ Q+ D L DI EM ++ L
Sbjct: 262 MEMLIKKEPH-ISALRIGHPARYNSELYKYSMAYQMKENDQGKLLKDIEMEMVSVERSLE 320
Query: 314 KTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA----------VSR 363
KD++ + E +K ++L KE ++R+ LA+ + ++ T GA
Sbjct: 321 HAKDRHQQYEWKKVRKSLQKEWKERKSLAMCQSFQQTQIIFCTCAGAGDWTMESLFSNHS 380
Query: 364 KLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTL 423
+L D +IIDEA QALE CWI LLKG R ILAGD QLPPTV S A + GL +++
Sbjct: 381 RLGRNGLDTIIIDEAGQALESLCWIPLLKGKRAILAGDPFQLPPTVLSQRAIENGLAKSI 440
Query: 424 FERLADLYGDE--VTSMLTVQYRMHEHIMNWSSKQLY------NSKIKAHP----SGVKR 471
+R+ E + S+L +QYRMH I WSS Y + ++ H GV+R
Sbjct: 441 LDRIFQHKQLEQSIVSVLQIQYRMHLCISEWSSHTFYRGLLSPDKDVECHLLCDLPGVRR 500
Query: 472 TSSTEPTLLLIDIAGCD-MEEKK----DEE----------DSTMNEGEAEVAMAHAKRLI 516
+TE LL ID AGCD +EE + DE+ +S N E ++ H + L+
Sbjct: 501 DRNTEIPLLWIDTAGCDCIEETESSFADEQTDSFAFLLGYESKRNRNEVQLCFQHLEELL 560
Query: 517 QSGVHASDIGIITPYAAQVVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSN 575
+ V IGII+PYAAQ+ + LR + KL + +E+STVDGFQGREKEAII+S+VRSN
Sbjct: 561 DAKVEPKQIGIISPYAAQI---RELRQRIAKLSEEIEISTVDGFQGREKEAIILSLVRSN 617
Query: 576 SKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
+E+GFL+D RR+NVA+TRARR C++ +++ + D L +L+ Y E+ E +EY
Sbjct: 618 DIQELGFLTDYRRINVAITRARRHICIIGNSDMMEKDSVLSQLVSYCFENGEIRYATEY 676
>gi|217076667|ref|YP_002334383.1| DNA helicase [Thermosipho africanus TCF52B]
gi|217036520|gb|ACJ75042.1| DNA helicase, putative [Thermosipho africanus TCF52B]
Length = 639
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 237/665 (35%), Positives = 357/665 (53%), Gaps = 77/665 (11%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLD--TAQKKGSTILNLK--CVDAQTGLMG 70
+++++ + L+ LE+ EI +NL +KKG ILNLK + + GL
Sbjct: 1 MKKYIEKLIKLVQLERNEEIKK--MEWEIKNLSGFEREKKGRAILNLKPKVIGEELGLY- 57
Query: 71 KTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIP 130
L++F +K + + D V++ NK + +GVV I V+ D +
Sbjct: 58 --LIKFGRSK---IIETEINVGDEVLINKNKGKVRDDF--KGVVVEKGSRFIVVSLDKLL 110
Query: 131 EEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAF 190
+ +R++ A++VTY+R D L LS +NG ++ + + K +KK I F
Sbjct: 111 PKSFKE-VRIDLYASDVTYKRQIDNLKNLS---ENGKK--VLSYILKDIKFDDIKK-IDF 163
Query: 191 KPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASN 250
KPF+ NL++SQK +ISKALSSKN F++HGP GTGKT T+VE ILQEVKRG K+L A SN
Sbjct: 164 KPFDKNLNYSQKLSISKALSSKNFFLIHGPFGTGKTRTLVEYILQEVKRGKKVLVSADSN 223
Query: 251 IAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKAL-- 308
+AVDN+VERL +V VR+GHP+R+ ++L S L ++ + +++E L
Sbjct: 224 MAVDNLVERL-SEKVSHVRIGHPSRVSKKLLSSTLLFKIEKHKRYKELYKLKEEFSNLIE 282
Query: 309 -NGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAV------------------------ 343
K K K R +++ LSKE + + + +
Sbjct: 283 KREKFQKPIQKWRRGLSDEQILKLSKEGKTTRGIPLKMINAMAEWITLNNKIEKIKEEME 342
Query: 344 -------TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRC 396
D+I+N+ VV +T + + S L FD+V+IDEAAQ + I L KG +
Sbjct: 343 KLEEEISKDIIENSSVVFSTNSSSYSEILKGFEFDVVVIDEAAQTTIPSVLIPLSKGKKF 402
Query: 397 ILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQ 456
+LAGDH QLPPT+ S +A K L TLFE L D Y + +L +QYRM+E IM + +K+
Sbjct: 403 VLAGDHKQLPPTIISEKA--KELSITLFEILVDKY-PHMKELLNIQYRMNEKIMEFPNKE 459
Query: 457 LYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEEDST--MNEGE 504
YN K+K+ G + E T++ ID + + ++DST NE E
Sbjct: 460 FYNGKLKSGIGNITLKDLGFEGSDEITKPENTIIFIDTKSRKNKTENQKKDSTSYFNELE 519
Query: 505 AEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREK 564
A + ++ ++ G++ IG+ITPY QV L+K +EV+TVDGFQGREK
Sbjct: 520 ANIVKDIVEKFLKLGLNREYIGVITPYDDQVDLIKSFNL------GVEVNTVDGFQGREK 573
Query: 565 EAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
E IIIS VRSN +KE+GFL+D RR+NV++TRA+R+ + D+ T+ + K+ IE+ +
Sbjct: 574 EVIIISFVRSNQRKELGFLTDLRRLNVSITRAKRKLICIGDSSTLENHPTYKKFIEFVKN 633
Query: 625 HAEYL 629
YL
Sbjct: 634 KGVYL 638
>gi|255566048|ref|XP_002524012.1| DNA-binding protein smubp-2, putative [Ricinus communis]
gi|223536739|gb|EEF38380.1| DNA-binding protein smubp-2, putative [Ricinus communis]
Length = 989
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 248/704 (35%), Positives = 374/704 (53%), Gaps = 98/704 (13%)
Query: 5 KTKEKQSAVSLQEFVSVMAPLIDLEKEAEI-----------SASITSGASRNLD------ 47
K K QS + EF M+ L+ +E+++E+ + S S+ ++
Sbjct: 284 KAKAIQSRID--EFTKTMSELLQIERDSELEFTQEELNAVPTPDENSDPSKPIEFLVSHG 341
Query: 48 -TAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLK-PNKADLG 105
Q+ TI NL V TGL G L+ F+ LP D+V ++ + G
Sbjct: 342 QAQQELCDTICNLNAVSTSTGLGGMHLVLFRVEGNHRLPPTNLSPGDMVCVRICDSRGAG 401
Query: 106 SPALGQGVVYRLKD--SSITVAFDDIPEEGLNSPL--------RLEKLANEVTYRRMKDA 155
+ + QG V L + SI+VA + + S L R+ LA+ +TY R +A
Sbjct: 402 ATSCMQGFVNNLGEDGCSISVALESRHGDPTFSKLFGKGVRIDRIHGLADALTYERNCEA 461
Query: 156 LIQLSK-GVQN-GPAAGLIPVLFGEQKPTVLKKDIAFKPFNS----------NLDHSQKD 203
L+ L K G+Q P+ ++ LFG+ + ++ +N D SQ+
Sbjct: 462 LMLLQKNGLQKKNPSIAIVATLFGDSEDLAWLEEKDLAEWNEADMDGCFGSERFDDSQRR 521
Query: 204 AISKALSSKN-VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVP 262
A++ L+ K + ++ GPPGTGK+ + E+I++ V +G ++L A +N AVDN+VE+L
Sbjct: 522 AMALGLNQKRPLLIIQGPPGTGKSGLLKELIVRAVHQGERVLVTAPTNAAVDNMVEKLSN 581
Query: 263 HRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLA----------SDIRKEMKALNGKL 312
+ +VR+G+PAR+ V +L V NS LA SD+RK+++
Sbjct: 582 IGLDIVRVGNPARISSAVASKSLSEIV----NSKLATFRMEFERKKSDLRKDLRHC---- 633
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS---RKLDNTS 369
+D + I++ L+ L K +K+++ +V +V+ +A VVL T TGA R+LD +
Sbjct: 634 --LEDDSLAAGIRQLLKQLGKTMKKKEKESVKEVLSSAQVVLATNTGAADPLIRRLD--T 689
Query: 370 FDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
FDLV+IDEA QA+E +CWI +L+G RCILAGD QL P + S +A + GLG +L ER A
Sbjct: 690 FDLVVIDEAGQAIEPSCWIPILQGKRCILAGDQCQLAPVILSRKALEGGLGVSLLERAAT 749
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKA----------HPSGVKRTSSTEPTL 479
L+ + LT QYRM++ I +W+SK++Y +K+ H VK T T+ L
Sbjct: 750 LHDGVLALQLTTQYRMNDAIASWASKEMYGGLLKSSSKVASHLLVHSPFVKPTWITQCPL 809
Query: 480 LLID--------IAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPY 531
LL+D GC+ S NEGEAE+ + H LI +GV + I + +PY
Sbjct: 810 LLLDTRMPYGSLFIGCEEHLDPAGTGSFYNEGEAEIVVQHVISLIYAGVRPTTIAVQSPY 869
Query: 532 AAQVVLLKILRSKDDKLK---NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
AQV ++LR + D+L +EV+T+D FQGRE +A+IISMVRSN+ VGFL D RR
Sbjct: 870 VAQV---QLLRDRLDELPEADGVEVATIDSFQGREADAVIISMVRSNNLGAVGFLGDSRR 926
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRL---IEYFE--EHAE 627
MNVA+TRARR +VCD+ T+ + FL RL I YF +HAE
Sbjct: 927 MNVAITRARRHVAVVCDSSTICHNTFLARLLRHIRYFGRVKHAE 970
>gi|241949191|ref|XP_002417318.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223640656|emb|CAX44951.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 711
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 233/666 (34%), Positives = 357/666 (53%), Gaps = 108/666 (16%)
Query: 53 GSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFG--------THDVVVL------- 97
G I+NL+ V+ +TGL GKT+LE Q + PA G T D+V L
Sbjct: 38 GLGIINLQIVNVRTGLGGKTILELQ-----LDPAFSDGEINTSTLRTGDIVKLAKMTSSA 92
Query: 98 --------KP-----------NKADLGSPALGQGVVYRLKDSSITVAFDDIPEE------ 132
KP N++D+G A VV ++ +I+++ D+ ++
Sbjct: 93 SNQKLEKKKPLKNHKEESQAQNQSDVGIEA----VVIKVSTQTISISVDESTDDSKILQY 148
Query: 133 --GLNSPLR--LEKLANEVTYRRM---KDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK 185
N R L KL N +TY+RM D ++ + + +N + +L GE +
Sbjct: 149 YNNTNDSARMWLVKLTNSITYKRMISTMDKVLDMKESDKND----IHKILLGESQYIPKS 204
Query: 186 KDIAFKP--------FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV 237
K FN L+ SQ+ AI A++ N+ ++HGPPGTGKT T++E+I Q
Sbjct: 205 KSNGTSNNNHGENNFFNDQLNASQRQAIEFAINDSNITIIHGPPGTGKTYTLIELIQQLT 264
Query: 238 KRGSKILACAASNIAVDNIVERLVPHR--VRLVRLGHPARLLPQVLESALDAQVLRGDNS 295
+G K+L C SNI+VD I+ERL ++L+R+GHPARLL + L+ +L+ + +
Sbjct: 265 SKGEKVLVCGPSNISVDTILERLGNKYEPMKLIRIGHPARLLVKNLQHSLEI-LSKTYGR 323
Query: 296 SLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLT 355
+ +DI E++++ K+ K K R+ + EL+ L KE R+R++ V +++ A VV+
Sbjct: 324 EIINDISSEIQSVLTKIKKCKKYGERKALYSELKLLKKELRQRERKIVNELLVQAQVVVA 383
Query: 356 TLTGAVSRKLDNTS---------FDLVIIDEAAQALEIACWIALL---KGSRCILAGDHL 403
TL G+ S +L N+ FD +IIDE +Q+LE CWI LL + R ++AGD++
Sbjct: 384 TLHGSGSFELKNSVGNNDSSGMVFDTIIIDEVSQSLEPQCWIPLLLSNRFKRLVIAGDNM 443
Query: 404 QLPPTVQSVEAEKKG----LGRTLFERLA-DLYGDEVTSMLTVQYRMHEHIMNWSSKQLY 458
QLPPT++ ++ L TLF+RL GD+ +L VQYRM++ IM + S QLY
Sbjct: 444 QLPPTIKKQKSNSSSSASILATTLFDRLVKHCQGDQYKKLLDVQYRMNKSIMQFPSMQLY 503
Query: 459 NSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEE---DSTMNEGEA 505
++++K S GV+ T + D G + E+ E DS N+ E
Sbjct: 504 DNQLKCDDSVRDISLVDLPGVEINDDTMTKCIWYDTEGGEFPEQISESVDGDSKYNDMEL 563
Query: 506 EVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR-----SKDDKLKNMEVSTVDGFQ 560
V H K+L+ GV DIG+I PY+AQV LK + DK +E+STVDGFQ
Sbjct: 564 LVVKGHIKKLLSCGVRPQDIGVIAPYSAQVQNLKKQMGLGDGANGDKDGQIEISTVDGFQ 623
Query: 561 GREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG--FLKRL 618
GREKE II+++VRSN +E+GFLS++RR+NVA+TR +RQ C+V D E ++ G FL+
Sbjct: 624 GREKEVIILTLVRSNDSREIGFLSEQRRLNVAMTRPKRQLCVVGDLELMNQSGNKFLQSW 683
Query: 619 IEYFEE 624
++ E+
Sbjct: 684 SKFVED 689
>gi|419759476|ref|ZP_14285775.1| DNA helicase [Thermosipho africanus H17ap60334]
gi|407515486|gb|EKF50231.1| DNA helicase [Thermosipho africanus H17ap60334]
Length = 639
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 236/665 (35%), Positives = 356/665 (53%), Gaps = 77/665 (11%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLD--TAQKKGSTILNLK--CVDAQTGLMG 70
+++++ + L+ LE+ EI +NL +KKG ILNLK + + GL
Sbjct: 1 MKKYIEKLIKLVQLERNEEIKK--MEWEIKNLSGFEREKKGRAILNLKPKVIGEELGLY- 57
Query: 71 KTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIP 130
L++F +K + + D V++ NK + +GVV I V+ D +
Sbjct: 58 --LIKFGRSK---IIETEINVGDEVLINKNKGKVRDDF--KGVVVEKGSRFIVVSLDKLL 110
Query: 131 EEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAF 190
+ +R++ A++VTY+R D L LS +NG ++ + + K +KK I F
Sbjct: 111 PKSFKE-VRIDLYASDVTYKRQIDNLKNLS---ENGKK--VLSYILKDIKFDDIKK-IDF 163
Query: 191 KPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASN 250
KPF+ NL++SQK +ISKALSSKN F++HGP GTGKT T+VE ILQEVKRG K+L A SN
Sbjct: 164 KPFDKNLNYSQKLSISKALSSKNFFLIHGPFGTGKTRTLVEYILQEVKRGKKVLVSADSN 223
Query: 251 IAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKAL-- 308
+AVDN+VERL +V VR+GHP+R+ ++L S L ++ + +++E L
Sbjct: 224 MAVDNLVERL-SEKVSHVRIGHPSRVSKKLLSSTLLFKIEKHKRYKELYKLKEEFSNLIE 282
Query: 309 -NGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAV------------------------ 343
K K K R +++ LSKE + + + +
Sbjct: 283 KREKFQKPIQKWRRGLSDEQILKLSKEGKTTRGIPLKMINAMAEWITLNNKIEKIKEEME 342
Query: 344 -------TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRC 396
D+I+N+ VV +T + + S L FD+V+IDEAAQ + I L KG +
Sbjct: 343 KLEEEISKDIIENSSVVFSTNSSSYSEILKGFEFDVVVIDEAAQTTIPSVLIPLSKGKKF 402
Query: 397 ILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQ 456
+LAGDH QLPPT+ S +A K L TLFE L D Y + +L +QYRM+E IM + + +
Sbjct: 403 VLAGDHKQLPPTIISEKA--KELSITLFEILVDKY-PHMKELLNIQYRMNEKIMEFPNIE 459
Query: 457 LYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEEDST--MNEGE 504
YN K+K+ G + E T++ ID + + ++DST NE E
Sbjct: 460 FYNGKLKSGIGNITLKDLGFEGSDEITKPENTIIFIDTKSRKNKTENQKKDSTSYFNELE 519
Query: 505 AEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREK 564
A + ++ ++ G++ IG+ITPY QV L+K +EV+TVDGFQGREK
Sbjct: 520 ANIVKDIVEKFLKLGLNREYIGVITPYDDQVDLIKSFNL------GVEVNTVDGFQGREK 573
Query: 565 EAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
E IIIS VRSN +KE+GFL+D RR+NV++TRA+R+ + D+ T+ + K+ IE+ +
Sbjct: 574 EVIIISFVRSNQRKELGFLTDLRRLNVSITRAKRKLICIGDSSTLENHPTYKKFIEFVKN 633
Query: 625 HAEYL 629
YL
Sbjct: 634 KGVYL 638
>gi|432328902|ref|YP_007247046.1| DNA helicase, putative [Aciduliprofundum sp. MAR08-339]
gi|432135611|gb|AGB04880.1| DNA helicase, putative [Aciduliprofundum sp. MAR08-339]
Length = 650
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 219/667 (32%), Positives = 355/667 (53%), Gaps = 75/667 (11%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
+++++S LI++E+E E+ ++ G ILNL+ GL G L+
Sbjct: 1 MEDYISHFVRLINIEREEEMRRHWEEIKRLTGKKRERLGRAILNLRGKFIGRGLGGAYLV 60
Query: 75 EFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGL 134
+F ++ D +P ++ DVV++ K +P Q VY I ++F P + +
Sbjct: 61 KF--SRKD-MPKNELMVGDVVIVSAGKV---TPKNPQATVYEKGSRYIVLSFSKTPPKFV 114
Query: 135 NSP-LRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPF 193
+R++ AN++T++RM +A+ ++ L ++ G + ++ + F+
Sbjct: 115 YGKNVRVDLYANDITFQRMLEAV----NSIKREEYLRLRGIILGRANLEIHEEQVNFE-- 168
Query: 194 NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAV 253
N+ L+ Q+ A+ +++ S+ +F++HGPPGTGKTTT+ E I+Q V+RG K+LA A SN+AV
Sbjct: 169 NTRLNEFQRRAVRRSIGSE-LFLIHGPPGTGKTTTLAEGIVQMVRRGFKVLATADSNVAV 227
Query: 254 DNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGK-- 311
DN+VE+L H+V +VR+GHPAR+ ++E LD V R A ++ + + + +
Sbjct: 228 DNLVEKLA-HKVNVVRIGHPARISKSIIEHTLDYIVSRDIEYRKAMELWERIDGMREEQS 286
Query: 312 -------------------LLKTKDKNTRR-------------EIQKELRTLSKEERKRQ 339
L ++ R +IQ+ + K +K +
Sbjct: 287 RYTKPTPQWRRGMGDDEIVYLANASRSYRGVPVEVMKGMAQWIKIQRRIDEYVKRAKKME 346
Query: 340 QLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILA 399
+ A+ V+ NADV+ TT + A L + FD V+IDEA QA+E +C I +LKG+R ++A
Sbjct: 347 ERAIIRVLDNADVICTTNSTAGGEMLRDLKFDFVVIDEATQAVEPSCLIPMLKGTRILMA 406
Query: 400 GDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYN 459
GDH QLPPTV S +A K L TLFERL +Y + + L +QYRM+E IM + S Y
Sbjct: 407 GDHKQLPPTVMSYDA--KALQLTLFERLIKIY-PQASITLRIQYRMNEKIMEFPSNMFYR 463
Query: 460 SKIKAHPSGVKRT-----------------SSTEPTLLLIDIAGCDMEEKKDEEDSTMNE 502
++AH + RT + E ++ +D+ EE++ S N
Sbjct: 464 GLLEAHRTVKDRTIADVGIDPSRISEMRDICNPEEVIIFVDLE--TEEEQRRGSTSYQNP 521
Query: 503 GEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGR 562
GEA L++ G+ IGIITPY QV LLK + +D +E+ +VDGFQGR
Sbjct: 522 GEARCVTRIVNCLLKIGLKEKHIGIITPYDDQVDLLKSIIPNED----LEIKSVDGFQGR 577
Query: 563 EKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
EKE I+IS VR+N + E+GFL+D RR+NVA+TRA+R+ +V +++T+ + LI+Y
Sbjct: 578 EKEVIVISFVRANDRGELGFLTDLRRLNVAITRAKRKLIIVGNSKTLRAHPVYDSLIDYI 637
Query: 623 EEHAEYL 629
E + L
Sbjct: 638 EHRGKVL 644
>gi|444317545|ref|XP_004179430.1| hypothetical protein TBLA_0C00960 [Tetrapisispora blattae CBS 6284]
gi|387512471|emb|CCH59911.1| hypothetical protein TBLA_0C00960 [Tetrapisispora blattae CBS 6284]
Length = 694
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 237/678 (34%), Positives = 360/678 (53%), Gaps = 88/678 (12%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLE 75
+E + I+ EK +I + S +L T G I L + ++G+ GK LE
Sbjct: 3 KELSELFLNAIEYEKSQDIKQTTELLQSSSLKTLVSSGYAISKLILENIRSGIGGKLFLE 62
Query: 76 F---QSTKGDVLPAHKFGTHDVVVLKP----------------------------NKADL 104
+T ++ + T D+V ++P NK+D
Sbjct: 63 LGPDHATSTEIAGGN-IRTGDIVSIRPSTSSSKDKKQAKLQSNKHHKPLRNHKDYNKSDA 121
Query: 105 GSPALGQGVVYRLKDSSITVAFDDIPEEG---LNSPLRLE--KLANEVTYRRMKDALIQL 159
GVV ++ + + +A ++ E+ L S RL K N++TY+RM+ + +L
Sbjct: 122 VPIDAVVGVVTKINEKVLIIAIEENQEKNAIQLYSCTRLYVFKTVNDITYKRMESTMRKL 181
Query: 160 SKGVQNGPAAGLIPVLFGE-----QKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNV 214
S+ + ++ L E Q P D+ F+ N L+ SQK AI +L++ ++
Sbjct: 182 SE-FKFLSDKKIVQYLLNEAQFIRQSPI---SDVKFE--NDQLNESQKTAIKFSLAN-SI 234
Query: 215 FMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERL--VPHRVRLVRLGH 272
++HGPPGTGKT T+VE+I Q V RG ++L C SNI+VD I+ERL V L+R+GH
Sbjct: 235 SIIHGPPGTGKTYTLVELIQQLVHRGQRVLVCGPSNISVDTILERLSKVLPPDSLLRIGH 294
Query: 273 PARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLS 332
PARLL + L +LD GD S+ DI ++ + K K RRE K ++ L
Sbjct: 295 PARLLEKNLSYSLDVLSKTGDFGSILKDILNDIDKTIRDIRKMKKDKDRREGWKLVKELR 354
Query: 333 KEERKRQQLAVTDVIKNADVVLTTLTGAVSRKL--------DNTSFDLVIIDEAAQALEI 384
+E ++R+ A+T+ I + V++ TL G+ SR+L D FD +IIDE +Q+LE
Sbjct: 355 QELKEREGKAITEFILKSKVIVATLHGSSSRELCSVYKDIGDRNLFDTLIIDEVSQSLEP 414
Query: 385 ACWIALLKG-----SRCILAGDHLQLPPTVQSVEAEK--KGLGRTLFERLADLYGDEVTS 437
CWI ++ ++ +LAGD+ QL PT+++ + K K LG TLF+RL YGD+
Sbjct: 415 QCWIPIISHYKSDITKLVLAGDNQQLSPTIKTTDNSKIIKTLGTTLFDRLVKNYGDQFKL 474
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGC 487
+L VQYRM++ IM + S+Q+Y++K+ A S GV T LL D G
Sbjct: 475 LLNVQYRMNKDIMQFPSEQMYDNKLVADESVSRLLLNDLSGVDDNDETMVPLLWYDTQGD 534
Query: 488 DMEEKKDEED------STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK-I 540
+ E D+ + S NEGEA + H +L+ S + IGII+PY+AQV LK +
Sbjct: 535 EFPESSDDAENADIISSKYNEGEALIVKDHVIKLMDSNISQEHIGIISPYSAQVSYLKKL 594
Query: 541 LRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
LR +K +E+ TVDGFQGREKE II+++VRSN K EVGFL + RR+NVA+TR ++Q
Sbjct: 595 LR---EKYPLIEIQTVDGFQGREKEVIILTLVRSNEKFEVGFLKEERRLNVAMTRPKKQL 651
Query: 601 CLVCDTETV--SSDGFLK 616
C+V + E + S + +LK
Sbjct: 652 CIVGNMEMLERSRNKYLK 669
>gi|297805152|ref|XP_002870460.1| hypothetical protein ARALYDRAFT_493645 [Arabidopsis lyrata subsp.
lyrata]
gi|297316296|gb|EFH46719.1| hypothetical protein ARALYDRAFT_493645 [Arabidopsis lyrata subsp.
lyrata]
Length = 979
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 248/696 (35%), Positives = 373/696 (53%), Gaps = 86/696 (12%)
Query: 1 MEGRKTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASI-----------TSGAS------ 43
M K K Q+ + EF S M+ L+ +E++ E+ + +S +S
Sbjct: 270 MSSEKVKAIQARI--DEFTSHMSQLLQVERDTELEVTQEELDVIPTPDESSDSSKPIEFL 327
Query: 44 -RNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLK-PNK 101
R+ D Q+ TI NL V TGL G L+ F+ LP D+V ++ +
Sbjct: 328 VRHGDAPQELCDTICNLYAVSTSTGLGGMHLVLFKVGGNHRLPPTTLSPGDMVCIRVCDS 387
Query: 102 ADLGSPALGQGVVYRLKD--SSITVAFDDIPEEGLNSPL--------RLEKLANEVTYRR 151
G+ A QG V+ L + SI VA + + S L R+ LA+ +TY R
Sbjct: 388 RGAGATACTQGFVHNLGEDGCSIGVALESRHGDPTFSKLFGKSVRIDRIHGLADALTYER 447
Query: 152 MKDALIQLSK-GVQN-GPAAGLIPVLFG-EQKPTVLKKD---------IAFKPFNSNLDH 199
+AL+ L K G+Q P+ ++ LFG E+ T L+++ ++ +P + D
Sbjct: 448 NCEALMLLQKNGLQKKNPSISVVATLFGDEEDITWLEQNDYVDWSEAELSDEPVSKLFDS 507
Query: 200 SQKDAISKALSSKN-VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVE 258
SQ+ AI+ ++ K V ++ GPPGTGKT + E+I V++G ++L A +N AVDN+VE
Sbjct: 508 SQRRAIALGVNKKRPVMIVQGPPGTGKTGMLKEVITLAVQQGERVLVTAPTNAAVDNMVE 567
Query: 259 RLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDK 318
+L+ + +VR+G+PAR+ V +L V NS LAS R E++ L K +
Sbjct: 568 KLLHLGLNIVRVGNPARISSAVASKSLGEIV----NSKLAS-FRAELERKKSDLRKDLRQ 622
Query: 319 NTRRE-----IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS---RKLDNTSF 370
R + I++ L+ L K +K+++ V +++ NA VV T GA R+L+ +F
Sbjct: 623 CLRDDVLAAGIRQLLKQLGKTLKKKEKETVKEILSNAHVVFATNIGAADPLIRRLE--TF 680
Query: 371 DLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
DLV+IDEA Q++E +CWI +L+G RCIL+GD QL P V S +A + GLG +L ER A L
Sbjct: 681 DLVVIDEAGQSIEPSCWIPILQGKRCILSGDPCQLAPVVLSRKALEGGLGVSLLERAASL 740
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLL 480
+ + + LT QYRM++ I W+SK++Y +K+ PS VK T T+ L+
Sbjct: 741 HDGVLATKLTTQYRMNDVIAGWASKEMYGGWLKSAPSVASHLLIDSPFVKPTWITQCPLV 800
Query: 481 LIDI--------AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYA 532
L+D GC+ S NEGEA++ + H LI +GV I + +PY
Sbjct: 801 LLDTRMPYGSLSMGCEERLDPAGTGSLYNEGEADIVVNHVISLIYAGVSPMAIAVQSPYV 860
Query: 533 AQVVLLKILRSKDDKLK---NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRM 589
AQV ++LR + D +EV+T+D FQGRE +A+IISMVRSN+ VGFL D RRM
Sbjct: 861 AQV---QLLRERLDDFPVADGVEVATIDSFQGREADAVIISMVRSNNLGAVGFLGDSRRM 917
Query: 590 NVAVTRARRQCCLVCDTETVSSDGFLKRL---IEYF 622
NVA+TRAR+ +VCD+ T+ + FL RL I YF
Sbjct: 918 NVAITRARKHVAVVCDSSTICHNTFLARLLRHIRYF 953
>gi|9758800|dbj|BAB09253.1| DNA helicase-like [Arabidopsis thaliana]
Length = 750
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 247/696 (35%), Positives = 373/696 (53%), Gaps = 86/696 (12%)
Query: 1 MEGRKTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASI-----------TSGAS------ 43
M+ K K Q + EF S M+ L+ +E++ E+ + +S +S
Sbjct: 41 MDSEKVKAIQERI--DEFTSQMSQLLQVERDTELEVTQEELDVVPTPDESSDSSKPIEFL 98
Query: 44 -RNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLK-PNK 101
R+ D Q+ TI NL V TGL G L+ F+ LP D+V ++ +
Sbjct: 99 VRHGDAPQELCDTICNLYAVSTSTGLGGMHLVLFKVGGNHRLPPTTLSPGDMVCIRVCDS 158
Query: 102 ADLGSPALGQGVVYRLKD--SSITVAFDDIPEEGLNSPL--------RLEKLANEVTYRR 151
G+ A QG V+ L + SI VA + + S L R+ LA+ +TY R
Sbjct: 159 RGAGATACTQGFVHNLGEDGCSIGVALESRHGDPTFSKLFGKSVRIDRIHGLADALTYER 218
Query: 152 MKDALIQLSK-GVQN-GPAAGLIPVLFGE-QKPTVLKKD---------IAFKPFNSNLDH 199
+AL+ L K G+Q P+ ++ LFG+ + T L+++ ++ +P + D
Sbjct: 219 NCEALMLLQKNGLQKKNPSISVVATLFGDGEDITWLEQNDYVDWSEAELSDEPVSKLFDS 278
Query: 200 SQKDAISKALSSKN-VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVE 258
SQ+ AI+ ++ K V ++ GPPGTGKT + E+I V++G ++L A +N AVDN+VE
Sbjct: 279 SQRRAIALGVNKKRPVMIVQGPPGTGKTGMLKEVITLAVQQGERVLVTAPTNAAVDNMVE 338
Query: 259 RLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDK 318
+L+ + +VR+G+PAR+ V +L V NS LAS R E++ L K +
Sbjct: 339 KLLHLGLNIVRVGNPARISSAVASKSLGEIV----NSKLAS-FRAELERKKSDLRKDLRQ 393
Query: 319 NTRRE-----IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS---RKLDNTSF 370
R + I++ L+ L K +K+++ V +++ NA VV T GA R+L+ +F
Sbjct: 394 CLRDDVLAAGIRQLLKQLGKTLKKKEKETVKEILSNAQVVFATNIGAADPLIRRLE--TF 451
Query: 371 DLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
DLV+IDEA Q++E +CWI +L+G RCIL+GD QL P V S +A + GLG +L ER A L
Sbjct: 452 DLVVIDEAGQSIEPSCWIPILQGKRCILSGDPCQLAPVVLSRKALEGGLGVSLLERAASL 511
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLL 480
+ + + LT QYRM++ I W+SK++Y +K+ PS VK T T+ L+
Sbjct: 512 HDGVLATKLTTQYRMNDVIAGWASKEMYGGWLKSAPSVASHLLIDSPFVKATWITQCPLV 571
Query: 481 LIDI--------AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYA 532
L+D GC+ S NEGEA++ + H LI +GV I + +PY
Sbjct: 572 LLDTRMPYGSLSVGCEERLDPAGTGSLYNEGEADIVVNHVISLIYAGVSPMAIAVQSPYV 631
Query: 533 AQVVLLKILRSKDDKLK---NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRM 589
AQV ++LR + D +EV+T+D FQGRE +A+IISMVRSN+ VGFL D RRM
Sbjct: 632 AQV---QLLRERLDDFPVADGVEVATIDSFQGREADAVIISMVRSNNLGAVGFLGDSRRM 688
Query: 590 NVAVTRARRQCCLVCDTETVSSDGFLKRL---IEYF 622
NVA+TRAR+ +VCD+ T+ + FL RL I YF
Sbjct: 689 NVAITRARKHVAVVCDSSTICHNTFLARLLRHIRYF 724
>gi|389852292|ref|YP_006354526.1| DNA2-NAM7 helicase family protein [Pyrococcus sp. ST04]
gi|388249598|gb|AFK22451.1| putative DNA2-NAM7 helicase family protein [Pyrococcus sp. ST04]
Length = 633
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 219/600 (36%), Positives = 342/600 (57%), Gaps = 80/600 (13%)
Query: 93 DVVVLK---PNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTY 149
D+VV+ P K+DL + +G + ITVA + +PE L + +R++ AN++T+
Sbjct: 49 DLVVISKRDPLKSDLVGTVVEKGKRF------ITVALETVPEWALRN-VRIDLYANDITF 101
Query: 150 RRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKAL 209
+R + L + + + + G ++P+ ++I F+PF+ +L+ +QK AIS+AL
Sbjct: 102 KRWLENLETIKRAGKRA-----LKFYLGIEEPSE-GEEIKFEPFDKSLNSAQKKAISRAL 155
Query: 210 SSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVR 269
S++ F++HGP GTGKT +VE+I QE+KRG+K+LA A SN+AVDN+VERL V++VR
Sbjct: 156 GSEDFFLIHGPFGTGKTRALVELIRQEIKRGNKVLATAESNVAVDNLVERLAREGVKIVR 215
Query: 270 LGHPARLLPQVLESALDAQV-----------LRGDNSSLA-----------------SD- 300
+GHP+R+ ++ E+ L + LR SLA SD
Sbjct: 216 VGHPSRVSRELHETTLAYLITQHELYGELRDLRVVGQSLAEKRDTYTKPTPRFRRGLSDE 275
Query: 301 --IR-----KEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVV 353
IR + + L+ +L+K + + + K+++ +E RK ++ D+I+ ADVV
Sbjct: 276 EIIRLAERGRGARGLSARLIKEMAEWIK--LNKQVQKAFEEARKLEERIARDIIREADVV 333
Query: 354 LTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVE 413
LTT + A +D +D+ I+DEA Q+ + I L K R ILAGDH QLPPT+ S+E
Sbjct: 334 LTTNSSAALEVVDYAKYDVAIVDEATQSTIPSILIPLNKVDRFILAGDHKQLPPTILSLE 393
Query: 414 AEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS------ 467
A++ L +TLFE L + Y + + MLT+QYRM+E IM + SK+ Y KIKAH S
Sbjct: 394 AQE--LSKTLFEGLIERYPWK-SEMLTIQYRMNERIMEFPSKEFYGGKIKAHESVKNITL 450
Query: 468 ---GVKRTSST-----EPTLLLIDIAGCDMEEKKDEE----DSTMNEGEAEVAMAHAKRL 515
G+K +P +L+ I +E K + + +S N EA++ K+L
Sbjct: 451 ADLGIKIEEENWKEVLDPKTVLVFIDTSKLENKWERQRRGSESRENPLEAKIVAKIVKKL 510
Query: 516 IQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSN 575
+ +GV IG+ITPY Q L+ + ++ +EV TVDG+QGREKE II+S VRSN
Sbjct: 511 LNAGVKPEWIGVITPYDDQRDLISMSVPEE-----VEVKTVDGYQGREKEVIILSFVRSN 565
Query: 576 SKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
K E+GFL D RR+NV++TRA+R+ +V D+ T+SS KR+IE+ ++ + E +
Sbjct: 566 KKGEIGFLKDLRRLNVSLTRAKRKLIMVGDSSTLSSHETYKRMIEHVRKYGRIIEAEEII 625
>gi|30692868|ref|NP_198446.3| putative DNA-binding protein [Arabidopsis thaliana]
gi|332006651|gb|AED94034.1| putative DNA-binding protein [Arabidopsis thaliana]
Length = 961
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 247/696 (35%), Positives = 373/696 (53%), Gaps = 86/696 (12%)
Query: 1 MEGRKTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASI-----------TSGAS------ 43
M+ K K Q + EF S M+ L+ +E++ E+ + +S +S
Sbjct: 252 MDSEKVKAIQERI--DEFTSQMSQLLQVERDTELEVTQEELDVVPTPDESSDSSKPIEFL 309
Query: 44 -RNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLK-PNK 101
R+ D Q+ TI NL V TGL G L+ F+ LP D+V ++ +
Sbjct: 310 VRHGDAPQELCDTICNLYAVSTSTGLGGMHLVLFKVGGNHRLPPTTLSPGDMVCIRVCDS 369
Query: 102 ADLGSPALGQGVVYRLKD--SSITVAFDDIPEEGLNSPL--------RLEKLANEVTYRR 151
G+ A QG V+ L + SI VA + + S L R+ LA+ +TY R
Sbjct: 370 RGAGATACTQGFVHNLGEDGCSIGVALESRHGDPTFSKLFGKSVRIDRIHGLADALTYER 429
Query: 152 MKDALIQLSK-GVQN-GPAAGLIPVLFGE-QKPTVLKKD---------IAFKPFNSNLDH 199
+AL+ L K G+Q P+ ++ LFG+ + T L+++ ++ +P + D
Sbjct: 430 NCEALMLLQKNGLQKKNPSISVVATLFGDGEDITWLEQNDYVDWSEAELSDEPVSKLFDS 489
Query: 200 SQKDAISKALSSKN-VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVE 258
SQ+ AI+ ++ K V ++ GPPGTGKT + E+I V++G ++L A +N AVDN+VE
Sbjct: 490 SQRRAIALGVNKKRPVMIVQGPPGTGKTGMLKEVITLAVQQGERVLVTAPTNAAVDNMVE 549
Query: 259 RLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDK 318
+L+ + +VR+G+PAR+ V +L V NS LAS R E++ L K +
Sbjct: 550 KLLHLGLNIVRVGNPARISSAVASKSLGEIV----NSKLAS-FRAELERKKSDLRKDLRQ 604
Query: 319 NTRRE-----IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS---RKLDNTSF 370
R + I++ L+ L K +K+++ V +++ NA VV T GA R+L+ +F
Sbjct: 605 CLRDDVLAAGIRQLLKQLGKTLKKKEKETVKEILSNAQVVFATNIGAADPLIRRLE--TF 662
Query: 371 DLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
DLV+IDEA Q++E +CWI +L+G RCIL+GD QL P V S +A + GLG +L ER A L
Sbjct: 663 DLVVIDEAGQSIEPSCWIPILQGKRCILSGDPCQLAPVVLSRKALEGGLGVSLLERAASL 722
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLL 480
+ + + LT QYRM++ I W+SK++Y +K+ PS VK T T+ L+
Sbjct: 723 HDGVLATKLTTQYRMNDVIAGWASKEMYGGWLKSAPSVASHLLIDSPFVKATWITQCPLV 782
Query: 481 LIDI--------AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYA 532
L+D GC+ S NEGEA++ + H LI +GV I + +PY
Sbjct: 783 LLDTRMPYGSLSVGCEERLDPAGTGSLYNEGEADIVVNHVISLIYAGVSPMAIAVQSPYV 842
Query: 533 AQVVLLKILRSKDDKLK---NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRM 589
AQV ++LR + D +EV+T+D FQGRE +A+IISMVRSN+ VGFL D RRM
Sbjct: 843 AQV---QLLRERLDDFPVADGVEVATIDSFQGREADAVIISMVRSNNLGAVGFLGDSRRM 899
Query: 590 NVAVTRARRQCCLVCDTETVSSDGFLKRL---IEYF 622
NVA+TRAR+ +VCD+ T+ + FL RL I YF
Sbjct: 900 NVAITRARKHVAVVCDSSTICHNTFLARLLRHIRYF 935
>gi|436833526|ref|YP_007318742.1| AAA ATPase [Fibrella aestuarina BUZ 2]
gi|384064939|emb|CCG98149.1| AAA ATPase [Fibrella aestuarina BUZ 2]
Length = 632
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 198/538 (36%), Positives = 311/538 (57%), Gaps = 26/538 (4%)
Query: 116 RLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVL 175
RLK +T+ D++P+ + L +E L ++ +Y M+ AL + + + P LIP+L
Sbjct: 103 RLK---LTLRVDELPDWSRDGKLGVEVLFDDNSYDEMEAAL-KTANTLSQKPGHPLIPIL 158
Query: 176 FGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQ 235
GEQ PT + A P L+ SQ A+ K LS+ + ++HGPPGTGKTTT+++ I
Sbjct: 159 TGEQVPTFNAQTPA--PVLPQLNPSQVAAVHKILSANELAIVHGPPGTGKTTTLIQAIKA 216
Query: 236 EVKRG-SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDN 294
+K+ K+L A SN AVD + E+L + ++R+G+PAR+ +++ LD +V +
Sbjct: 217 LIKQDRQKLLVVAPSNTAVDLLSEKLHDEGLNVLRIGNPARVSERLMALTLDHKVSTHPH 276
Query: 295 SSLASDIRKEMKALNGKLLKTK------DKNTRREIQKELRTLSKEERKRQQLAVTDVIK 348
+ A ++K+ K K ++ R+ + E L K+ + +Q + D+I
Sbjct: 277 MNAAKKLKKQANEFRTMAHKYKRNFGKAEREQRKALFDEAHRLLKDVGQAEQYVIDDLIA 336
Query: 349 NADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPT 408
NA VV TL GA + + + ++ V+IDEA QALE ACWI +LK + +LAGDH QLPPT
Sbjct: 337 NAQVVTATLVGANNYTVRDLTYHTVVIDEAGQALEPACWIPILKAQKVVLAGDHCQLPPT 396
Query: 409 VQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSG 468
++S EA + GLG TL E+ L+ + VT +L QYRMHEHIM +SS+ Y++++KAHPS
Sbjct: 397 IKSAEAARNGLGTTLLEKCVALHPEAVT-LLNEQYRMHEHIMGYSSQVFYDNQVKAHPSV 455
Query: 469 VKRTSSTEPT-LLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIG- 526
+ + T L +D AGC +EK D ST N EA + + H +L+ +G
Sbjct: 456 ARHALFADDTALAFVDTAGCGFDEKLDGTSST-NPDEAALLIRHLTQLVGDLSQRYSLGT 514
Query: 527 -----IITPYAAQVVLLKILRSKDDKLK----NMEVSTVDGFQGREKEAIIISMVRSNSK 577
+I+PY Q+ +L +L+ ++ V+T+D FQG+E++ + IS+VRSN++
Sbjct: 515 FPTIAVISPYKQQINVLTEQLKNSPELQPYSGHISVNTIDSFQGQERDIVYISLVRSNTE 574
Query: 578 KEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
++GFLSD RRMNVA+TRAR++ + D+ T++S F I Y E Y S E++
Sbjct: 575 GDIGFLSDIRRMNVAMTRARKKLVIFGDSATLASLPFYSDFITYAEALGTYQSAWEWM 632
>gi|375084259|ref|ZP_09731266.1| DNA helicase, UvrD/REP family protein [Thermococcus litoralis DSM
5473]
gi|374741144|gb|EHR77575.1| DNA helicase, UvrD/REP family protein [Thermococcus litoralis DSM
5473]
Length = 656
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 238/678 (35%), Positives = 366/678 (53%), Gaps = 91/678 (13%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNL--KCVDAQTGLMG 70
+ ++ +++ + L++LE+EAEI A +K G ILNL K + + G
Sbjct: 1 MHVKSYIAKLIELVELEREAEIEAMREEMRRLRGYEREKLGRAILNLNGKIIGEEFGF-- 58
Query: 71 KTLLEFQSTKGDVLPAH-KFGTHDVVVLKPNKADLGSPALGQ--GVVYRLKDSSITVAFD 127
L+++ G P + D+V++ G+P + G V I +A +
Sbjct: 59 -KLVKY----GRKEPFKTEISVGDLVLI-----SRGNPLMSDLVGTVVEKGSRFIVIALE 108
Query: 128 DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKD 187
+P L + +R++ AN+VT+RR + L +LS +NG A + ++ ++KP K
Sbjct: 109 SVPSWALRN-VRIDLYANDVTFRRQIENLKRLS---ENGIKA--LKLILKQEKPM---KS 159
Query: 188 IA--FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILA 245
I F+PF+ NL+ +Q+ AI+ AL S++ F++HGP GTGKT T+ E+ILQEVKRGSK+LA
Sbjct: 160 IPQEFEPFDKNLNPTQRKAINLALGSEDFFLIHGPFGTGKTRTLAELILQEVKRGSKVLA 219
Query: 246 CAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEM 305
A SN+AVDN+VERL +V+LVRLGHP+R+ + ES L QV + ++R +
Sbjct: 220 TAESNVAVDNLVERLW-GKVKLVRLGHPSRVSKHLKESTLAFQVESHERYRRVRELRNKA 278
Query: 306 KAL-------------------NGKLLKTKDKNTRRE---------------IQKELRTL 331
+ L N ++LK +K + +E++ L
Sbjct: 279 ERLAMMRDQHKKPTPSLRRGLTNKQILKLAEKGRGARGVPAKDVKEMAQWIVLNEEVQKL 338
Query: 332 SKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL 391
K K ++ + ++I DV+L+T + A + + FD+ IIDEA+QA + I +
Sbjct: 339 YKFAGKIEEEIIREIIDKTDVILSTNSSAALEFIRDVEFDVAIIDEASQATIPSVLIPIA 398
Query: 392 KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN 451
K R +LAGDH QLPPT+ S EA K L TLFE+L DLY E ML +QYRM+E +M
Sbjct: 399 KAKRFVLAGDHKQLPPTILSEEA--KELSETLFEKLIDLY-PEKAKMLEIQYRMNEKLME 455
Query: 452 WSSKQLYNSKIKAHPS---------GVKRTSSTEPT---------LLLIDIAGCDMEEKK 493
+ S++ YN KIKA S V+ EP L+ +D A + ++
Sbjct: 456 FPSREFYNGKIKADESVKNITLADLKVREPFFGEPWDSILKREEPLVFVDTAERRDKWER 515
Query: 494 DEEDSTMNEGEAEVAMAH--AKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNM 551
+ ST E E + ++L + GV IGIITPY QV L++ L ++ +
Sbjct: 516 QRKGSTSRENPLEALLVKEIVEKLFRMGVKEEWIGIITPYDDQVDLIRSLVGEE-----I 570
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
EV TVDG+QGREKE I++S VRSN + E+GFL+D RR+NVA+TRA+R+ + D+ET+S+
Sbjct: 571 EVHTVDGYQGREKEVIVLSFVRSNKEDELGFLTDLRRLNVALTRAKRKLIAIGDSETLST 630
Query: 612 DGFLKRLIEYFEEHAEYL 629
KR +E+ + H Y+
Sbjct: 631 HPTYKRFLEFVKRHGRYI 648
>gi|238878861|gb|EEQ42499.1| hypothetical protein CAWG_00711 [Candida albicans WO-1]
Length = 719
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 230/672 (34%), Positives = 362/672 (53%), Gaps = 112/672 (16%)
Query: 53 GSTILNLKCVDAQTGLMGKTLLEFQ----STKGDVLPAHKFGTHDVVVL----------- 97
G I+NL+ V+ +TGL GKT+LE Q + G++ T D+V L
Sbjct: 38 GLGIINLQIVNIRTGLGGKTILELQLDSAFSDGEI-NTSTLRTGDIVKLAKMTSSALSNK 96
Query: 98 ----KPNK-----------ADLGSPALGQGVVYRLKDSSITVAFDDIPEE--------GL 134
KP+K +D+G A VV ++ +I+++ D+ ++
Sbjct: 97 SEKKKPSKNHKEESQTQDQSDVGIEA----VVIKVSTQTISISVDESTDDSKILQYYNNT 152
Query: 135 NSPLR--LEKLANEVTYRRM---KDALIQLSKGVQNGPAAGLIPVLFGEQK--------P 181
N R L KL N +TY+RM D ++ + + +N + +L GE +
Sbjct: 153 NDSARMWLVKLTNSITYKRMITTMDTVLAMKESDKND----IHKILLGESQYIPKSNGTS 208
Query: 182 TVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS 241
+I F FN L+ SQ+ AI A++ N+ ++HGPPGTGKT T++E+I Q +G
Sbjct: 209 NNNNGEINF--FNDKLNASQRQAIDFAINDSNITIIHGPPGTGKTYTLIELIQQLTSKGE 266
Query: 242 KILACAASNIAVDNIVERLVPHR--VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLAS 299
K+L C SNI+VD I+ERL ++L+R+GHPARLL + L+ +L+ + + + +
Sbjct: 267 KVLVCGPSNISVDTILERLGDKYELMKLIRIGHPARLLMKNLQHSLEI-LSKTYGRDIIN 325
Query: 300 DIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
+I +++++ K+ K K R+ + EL+ L KE R+R++ V +++ A VV+ TL G
Sbjct: 326 EILNDIQSVLTKIKKCKKYGERKALYSELKLLKKELRQRERKIVNELLVQAQVVVATLHG 385
Query: 360 AVSRKLDNTS---------FDLVIIDEAAQALEIACWIALL---KGSRCILAGDHLQLPP 407
+ S +L N+ FD +IIDE +Q+LE CWI LL + R ++AGD++QLPP
Sbjct: 386 SGSYELKNSVGTNNNEGIVFDTIIIDEVSQSLEPQCWIPLLLSNRFKRLVIAGDNMQLPP 445
Query: 408 TVQSVEAEKKG----------LGRTLFERLA-DLYGDEVTSMLTVQYRMHEHIMNWSSKQ 456
T+++ ++ L TLF+RL +G++ +L VQYRM++ IM + S Q
Sbjct: 446 TIKTQKSNSSSPSSSSSSASILATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQ 505
Query: 457 LYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEE---DSTMNEG 503
LY++++K S GV+ T + D G + E+ E DS N+
Sbjct: 506 LYDNQLKCDDSVREISLVDLPGVEINDDTMTKCIWYDTQGGEFPEQISESIDGDSKYNDM 565
Query: 504 EAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL---------RSKDDKLKNMEVS 554
E V H K+L+ SGV DIG+I PY+AQV LK + DK +E+S
Sbjct: 566 ELLVVKGHIKKLLSSGVQPQDIGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDGQIEIS 625
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG- 613
TVDGFQGREKE II+++VRSN +E+GFLS++RR+NVA+TR +RQ C+V D E ++ G
Sbjct: 626 TVDGFQGREKEVIILTLVRSNDSREIGFLSEQRRLNVAMTRPKRQLCVVGDLELMNQSGN 685
Query: 614 -FLKRLIEYFEE 624
FL+ ++ E+
Sbjct: 686 KFLQSWSKFVED 697
>gi|68474162|ref|XP_718790.1| hypothetical protein CaO19.6199 [Candida albicans SC5314]
gi|68474333|ref|XP_718706.1| hypothetical protein CaO19.13579 [Candida albicans SC5314]
gi|46440489|gb|EAK99794.1| hypothetical protein CaO19.13579 [Candida albicans SC5314]
gi|46440578|gb|EAK99882.1| hypothetical protein CaO19.6199 [Candida albicans SC5314]
Length = 719
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 230/672 (34%), Positives = 362/672 (53%), Gaps = 112/672 (16%)
Query: 53 GSTILNLKCVDAQTGLMGKTLLEFQS----TKGDVLPAHKFGTHDVVVL----------- 97
G I+NL+ V+ +TGL GKT+LE Q + G++ T D+V L
Sbjct: 38 GLGIINLQIVNIRTGLGGKTILELQFDSAFSDGEI-NTSTLRTGDIVKLAKMTSSALSNK 96
Query: 98 ----KPNK-----------ADLGSPALGQGVVYRLKDSSITVAFDDIPEE--------GL 134
KP+K +D+G A VV ++ +I+++ D+ ++
Sbjct: 97 SEKKKPSKNHKEESQTQDQSDVGIEA----VVIKVSTQTISISVDESTDDSKILQYYNNT 152
Query: 135 NSPLR--LEKLANEVTYRRM---KDALIQLSKGVQNGPAAGLIPVLFGEQK--------P 181
N R L KL N +TY+RM D ++ + + +N + +L GE +
Sbjct: 153 NDSARMWLVKLTNSITYKRMITTMDKVLAMKESDKND----IHKILLGESQYIPKSNGTS 208
Query: 182 TVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS 241
+I F FN L+ SQ+ AI A++ N+ ++HGPPGTGKT T++E+I Q +G
Sbjct: 209 NNNNGEINF--FNDKLNASQRQAIDFAINDSNITIIHGPPGTGKTYTLIELIQQLTSKGE 266
Query: 242 KILACAASNIAVDNIVERLVPHR--VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLAS 299
K+L C SNI+VD I+ERL ++L+R+GHPARLL + L+ +L+ + + + +
Sbjct: 267 KVLVCGPSNISVDTILERLGDKYEPMKLIRIGHPARLLMKNLQHSLEI-LSKTYGRDIIN 325
Query: 300 DIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
+I +++++ K+ K K R+ + EL+ L KE R+R++ V +++ A VV+ TL G
Sbjct: 326 EILNDIQSVLTKIKKCKKYGERKALYSELKLLKKELRQRERKIVNELLVQAQVVVATLHG 385
Query: 360 AVSRKLDNTS---------FDLVIIDEAAQALEIACWIALL---KGSRCILAGDHLQLPP 407
+ S +L N+ FD +IIDE +Q+LE CWI LL + R ++AGD++QLPP
Sbjct: 386 SGSYELKNSVGTNNNEGIVFDTIIIDEVSQSLEPQCWIPLLLSNRFKRLVIAGDNMQLPP 445
Query: 408 TVQSVEAEKKG----------LGRTLFERLA-DLYGDEVTSMLTVQYRMHEHIMNWSSKQ 456
T+++ ++ L TLF+RL +G++ +L VQYRM++ IM + S Q
Sbjct: 446 TIKTQKSNSSSPSSSSSSASILATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQ 505
Query: 457 LYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEE---DSTMNEG 503
LY++++K S GV+ T + D G + E+ E DS N+
Sbjct: 506 LYDNQLKCDDSVREISLVDLPGVEINDDTMTKCIWYDTQGGEFPEQISESIDGDSKYNDM 565
Query: 504 EAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL---------RSKDDKLKNMEVS 554
E V H K+L+ SGV DIG+I PY+AQV LK + DK +E+S
Sbjct: 566 ELLVVKGHIKKLLSSGVQPQDIGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDGQIEIS 625
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG- 613
TVDGFQGREKE II+++VRSN +E+GFLS++RR+NVA+TR +RQ C+V D E ++ G
Sbjct: 626 TVDGFQGREKEVIILTLVRSNDSREIGFLSEQRRLNVAMTRPKRQLCVVGDLELMNQSGN 685
Query: 614 -FLKRLIEYFEE 624
FL+ ++ E+
Sbjct: 686 KFLQSWSKFVED 697
>gi|392396283|ref|YP_006432884.1| DNA/RNA helicase [Flexibacter litoralis DSM 6794]
gi|390527361|gb|AFM03091.1| DNA/RNA helicase, superfamily I [Flexibacter litoralis DSM 6794]
Length = 661
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 205/626 (32%), Positives = 343/626 (54%), Gaps = 44/626 (7%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPAL 109
+K G + D GL G+ ++ + T P H+ +V + K L
Sbjct: 39 RKDGLCWFPVAINDEFVGLGGRWNIDIERTNDKGQP-HQLNVGSIVTVFEQKHGLEVDKT 97
Query: 110 GQGVVYRLKDSSITVAF--DDIPE--EGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQN 165
GVV ++++ + +A D++P+ E ++ + + ++ TYR M + Q+ K N
Sbjct: 98 N-GVVSKVENDKMRIALNNDELPDFLESQSNSIGVYSAFDDSTYREMNHTIEQVKKA-NN 155
Query: 166 GPAAGLIPVLFGEQKPTVLK-KDIA-----FKPFNSNLDH---SQKDAISKALSSKNVFM 216
A + GE++P K K++ + F + L+H SQK+A+ L ++++ +
Sbjct: 156 DRLADFREIFLGEKEPVFDKIKEVKTDKNEYSDFENALNHLNESQKNAVQNILRAQDIAI 215
Query: 217 LHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARL 276
+HGPPGTGKTTT+V I++ +K +I+ CA SN AVD + E+L V++ RLGHPAR+
Sbjct: 216 IHGPPGTGKTTTLVAAIVETLKNERQIMVCAPSNTAVDWLTEKLNAQNVKVTRLGHPARV 275
Query: 277 LPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK------DKNTRREIQKELRT 330
+ LD ++ + + + K+ + + K LK K +++ R+ + ++ +
Sbjct: 276 SDTLEHLTLDGKIEKHPDYKYYKSLLKQSEQMRRKALKFKRNFGKQERSERQHMLRDAKR 335
Query: 331 LSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIAL 390
L ++ K ++ V++++ V+ TL G+ + L++ +F + IDEAAQALE A WI +
Sbjct: 336 LKQDALKLEEYISKHVLEHSQVLACTLAGSANYMLNHRTFSTLFIDEAAQALEGATWIPI 395
Query: 391 LKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIM 450
LK +R I+AGDH QLPPT++S EA K GL TLFE++ + + +ML+VQYRM+E IM
Sbjct: 396 LKANRVIMAGDHQQLPPTIKSFEAAKSGLENTLFEKIIKNHP-QTANMLSVQYRMNEQIM 454
Query: 451 NWSSKQLYNSKIKAHPSGVKRT-SSTEPTLLLIDIAGCDMEEKKDEED-STMNEGEAEVA 508
+S+++ YN +KA + + +D AGC E ++EE S N EA++
Sbjct: 455 EFSNQKFYNGNLKAFETNKNHVLYQNLAPVEFVDTAGCGFSEMQNEETLSRYNPEEAKLV 514
Query: 509 MAHAKRLIQSGVHASD---------------IGIITPYAAQVVLLKILRSKDDKLKN--- 550
++H + L + + D +G+++ Y AQV LL+ L K++ L N
Sbjct: 515 VSHLQVLFEEILLKIDNKEIENSKEFIDNFSVGVLSTYKAQVYLLRDLIRKNEVLSNYSN 574
Query: 551 -MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
+ + TVDGFQG+E+E + IS+VRSN K E+GFL D RR NVA+TRA+++ + D+ T+
Sbjct: 575 QITIHTVDGFQGQEREVMYISLVRSNEKGEIGFLKDFRRFNVAITRAKKRLVVFGDSATL 634
Query: 610 SSDGFLKRLIEYFEEHAEYLSGSEYL 635
SD F K ++Y E Y S EY+
Sbjct: 635 GSDEFYKDFLDYTESIDAYKSAWEYM 660
>gi|14590762|ref|NP_142832.1| DNA-binding protein [Pyrococcus horikoshii OT3]
gi|3257320|dbj|BAA30003.1| 656aa long hypothetical DNA-binding protein [Pyrococcus horikoshii
OT3]
Length = 656
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 219/598 (36%), Positives = 341/598 (57%), Gaps = 87/598 (14%)
Query: 93 DVVVLK---PNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTY 149
D+VV+ P K+DL + +G + I VA + +PE L +R++ AN++T+
Sbjct: 77 DLVVISKRDPLKSDLLGTVVEKGKRF------IVVALETVPEWALRD-VRIDLYANDITF 129
Query: 150 RRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKAL 209
RR + L ++ K G A + G +P+ ++++F+PF+ +L+ SQ+ AI+K L
Sbjct: 130 RRWLENLDRVKKA---GKRA--LEFYLGLDEPS-QGEEVSFEPFDKSLNSSQRKAIAKGL 183
Query: 210 SSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVR 269
S++ F++HGP GTGKT T+VE+I QEVKRG+K+LA A SN+AVDN+VERL V++VR
Sbjct: 184 GSEDFFLIHGPFGTGKTRTLVELIRQEVKRGNKVLATAESNVAVDNLVERLAKDGVKIVR 243
Query: 270 LGHPARLLPQVLESAL-----------DAQVLRGDNSSLA-------------------- 298
+GHP+R+ + E+ L + + LR SLA
Sbjct: 244 VGHPSRVSRHLHETTLAYLITQHELYGELRELRVIGQSLAEKRDTYTKPTPKFRRGLSDA 303
Query: 299 -----SDIRKEMKALNGKLLKTKDKNTR--REIQKELRTLSKEERKRQQLAVTDVIKNAD 351
++ R+ ++ L+ +L+K + + R++QK ++ RK ++ D+I+ AD
Sbjct: 304 EIIKLAERRRGIRGLSARLIKEMAEWIKLNRQVQKAF----EDARKLEERIARDIIREAD 359
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
V+LTT + A +D T +D+ IIDEA QA + I L K R ILAGDH QLPPT+ S
Sbjct: 360 VILTTNSSAALEVVDATDYDVAIIDEATQATIPSILIPLNKVDRFILAGDHKQLPPTILS 419
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSK---------- 461
+EA++ L TLFE L + Y + + MLT+QYRM+E IM + SK+ Y+ +
Sbjct: 420 LEAQE--LSHTLFEGLIERYPWK-SEMLTIQYRMNERIMEFPSKEFYDGRIVADERVKNI 476
Query: 462 ------IKAHPSGVKRTSSTEPTLLLIDIAGC----DMEEKKDEEDSTMNEGEAEVAMAH 511
IK + +G+ R +P+ +L+ I C E ++ +S N EA++
Sbjct: 477 TLGDLGIKVNATGIWR-DILDPSNVLVFIDTCMLDNRFERQRRGSESRENPLEAKIVSKI 535
Query: 512 AKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISM 571
++L++SGV A IG+ITPY Q L+ + + + +EV TVDG+QGREKE II+S
Sbjct: 536 VEKLLESGVKAEMIGVITPYDDQRDLISL-----NVPEEVEVKTVDGYQGREKEVIILSF 590
Query: 572 VRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYL 629
VRSN E+GFL D RR+NV++TRA+R+ ++ D+ T+SS KRLIE+ E Y+
Sbjct: 591 VRSNKVGEIGFLKDLRRLNVSLTRAKRKLIMIGDSSTLSSHETYKRLIEHVREKGLYV 648
>gi|408674036|ref|YP_006873784.1| AAA ATPase [Emticicia oligotrophica DSM 17448]
gi|387855660|gb|AFK03757.1| AAA ATPase [Emticicia oligotrophica DSM 17448]
Length = 634
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 210/574 (36%), Positives = 323/574 (56%), Gaps = 38/574 (6%)
Query: 84 LPAHKFGTHDVVVLKPNKADL-GSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEK 142
+PA FG HD P K + G+ + G RLK IT+ D++P+ + L ++
Sbjct: 77 IPAVLFGNHD-----PQKDRVEGTISFLNG--NRLK---ITLKTDELPDFSRDGKLGIDL 126
Query: 143 LANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN-SNLDHSQ 201
L ++ +Y M+ AL + ++ + N P L+ +L GE+KPT + D+ P + L+ SQ
Sbjct: 127 LFDDNSYEEMQSAL-KYAQEMANKPEGNLVKILTGEKKPT-FRTDL--HPISVPKLNDSQ 182
Query: 202 KDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR---GSKILACAASNIAVDNIVE 258
+A++K +S+ + ++HGPPGTGKTTT+V+ I +K+ + IL A SN AVD + E
Sbjct: 183 NNALNKIISANELAIVHGPPGTGKTTTLVQTIKTIIKQENAKTPILVVAPSNTAVDLLSE 242
Query: 259 RLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK-- 316
+L + ++R+G+PAR+ +++ LD ++ A ++K+ K K
Sbjct: 243 KLSEEGLNVLRIGNPARVSERLMALTLDNKMTDHQLMKNAKTLKKQANEYRNMAHKYKRS 302
Query: 317 ----DKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+++ R+ + E + KE +Q + DV+ ++ TL GA + N SF
Sbjct: 303 FGKAERDQRKLLFDEAHKIMKEVGNIEQYVIDDVVTKTQIITATLVGANHYTIRNLSFHT 362
Query: 373 VIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG 432
VIIDEA QALE ACWI +LK + I AGDH QLPPT++S EA K GL TL E+ L+
Sbjct: 363 VIIDEAGQALEPACWIPILKAQKVIFAGDHCQLPPTIKSNEAAKNGLNTTLLEKCVALHP 422
Query: 433 DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST-EPTLLLIDIAGCDMEE 491
+ VT +L QYRM+E IM SSK YN+++KAH S K+T E L ID AGC +E
Sbjct: 423 EAVT-LLEEQYRMNEQIMAHSSKVFYNNQLKAHASVAKQTLFVDEKPLHFIDTAGCSFDE 481
Query: 492 KKDEEDSTMNEGEAEVAMAHAKRLIQ------SGVHASDIGIITPYAAQVVLLKILRSKD 545
K + ST N EA + H ++ S + I +I+PY Q+ +LK
Sbjct: 482 KLEGTSST-NPDEAAFLVKHLNGFVEELKKKFSTANFPSIAVISPYKQQISILKEQVEHA 540
Query: 546 DKLK----NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
+LK N+ V+T+D FQG+E++ + IS+ RSN++ +GFLSD RRMNVA+TRAR++
Sbjct: 541 PELKEVLNNISVNTIDSFQGQERDIVYISLTRSNAEGAIGFLSDIRRMNVAMTRARKKLI 600
Query: 602 LVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
++ D+ T+SS F + I Y +E Y S E++
Sbjct: 601 VIGDSATLSSSNFYEEFISYTQEIEAYQSAWEWM 634
>gi|332159100|ref|YP_004424379.1| dna2-nam7 helicase family protein [Pyrococcus sp. NA2]
gi|331034563|gb|AEC52375.1| dna2-nam7 helicase family protein [Pyrococcus sp. NA2]
Length = 655
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 222/598 (37%), Positives = 333/598 (55%), Gaps = 87/598 (14%)
Query: 93 DVVVLK---PNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTY 149
D+VV+ P K+DL + +G + I VA + +PE L +R++ AN++T+
Sbjct: 77 DLVVISRRDPLKSDLVGTVVEKGKRF------IVVALETVPEWALRG-VRIDLYANDITF 129
Query: 150 RRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKAL 209
+R + L ++ K + + G ++P+ +++ F+PF+ NL+ SQ+ AI KAL
Sbjct: 130 KRWLENLDRVKKAGKRA-----LEFYLGMEEPS-RSEEVKFEPFDKNLNPSQRRAIGKAL 183
Query: 210 SSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVR 269
S + F++HGP GTGKT T+VE+I QEVKRG+K+LA A SN+AVDN+VERLV +++VR
Sbjct: 184 GSDDFFLIHGPFGTGKTRTLVELIRQEVKRGNKVLATAESNVAVDNLVERLVDGGLKIVR 243
Query: 270 LGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELR 329
+GHP+R+ + E+ L Q+ + + L ++R E++ + L + +D T+ + K R
Sbjct: 244 VGHPSRVSRHLHETTLAYQITKHE---LYGELR-ELRVIGQSLAEKRDTYTK-PLPKYRR 298
Query: 330 TLSKEE---------------------------------------RKRQQLAVTDVIKNA 350
LS E RK ++ ++I+ A
Sbjct: 299 GLSDSEILRLAERGRGARGLSARLIREMAEWIKLNRQVQKAFEDARKLEERIAREIIREA 358
Query: 351 DVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQ 410
DVVLTT + A +D +D+ IIDEA QA + I L K R ILAGDH QLPPT+
Sbjct: 359 DVVLTTNSSAALEVVDAGDYDVAIIDEATQATIPSILIPLNKVERFILAGDHKQLPPTIL 418
Query: 411 SVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS--- 467
S+EA++ L RTLFE L + Y + + MLTVQYRM+E IM + SK+ Y +I A S
Sbjct: 419 SLEAQE--LSRTLFEGLIERYPWK-SEMLTVQYRMNERIMEFPSKEFYGGRIAADESVKD 475
Query: 468 ------GVKRTSS--------TEPTLLLIDIAGCD--MEEKKDEEDSTMNEGEAEVAMAH 511
G+ SS E L+ ID + + E ++ +S N EA++
Sbjct: 476 ITLRDLGILVDSSDMWAEILKPENVLVFIDTSKAENKWERQRRGSESRENPLEAKIVSEI 535
Query: 512 AKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISM 571
+RL++ GV IGIITPY Q L+ + +D +EV TVDG+QGREKE II+S
Sbjct: 536 VERLLRIGVKKEWIGIITPYDDQRDLISLNVPED-----VEVKTVDGYQGREKEVIILSF 590
Query: 572 VRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYL 629
VRSN E+GFL D RR+NV++TRARR+ +V D+ T+SS +RLIE+ +E ++
Sbjct: 591 VRSNKAGEIGFLKDLRRLNVSLTRARRKLIIVGDSSTLSSHETYRRLIEFIKEKGLFV 648
>gi|390444674|ref|ZP_10232447.1| ATPase AAA [Nitritalea halalkaliphila LW7]
gi|389664177|gb|EIM75683.1| ATPase AAA [Nitritalea halalkaliphila LW7]
Length = 601
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 206/559 (36%), Positives = 311/559 (55%), Gaps = 26/559 (4%)
Query: 94 VVVLKPNKADLGSPALGQGVVY-RLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRM 152
V P A GS +L + Y R + +IT+ D++P+ L+ + ++ L +E +YR M
Sbjct: 36 VFTFAPQGAS-GSASLNGVINYVRKEKMAITLNVDEVPQWLLHEKIGVDLLFDEASYRHM 94
Query: 153 KDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSK 212
+ A+ ++ K + A L VL G Q P N L+ Q+ A ++
Sbjct: 95 ESAMRRVIKA-KGDRTAELKEVLLGAQPARFSPHATLIAP-NRALNPPQEKACQLIQQAE 152
Query: 213 NVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGH 272
+V ++HGPPGTGKT+T+V+ IL ++L CA SN AVD + ERL + ++RLGH
Sbjct: 153 DVALVHGPPGTGKTSTLVQAILTASYTYPQVLVCAPSNAAVDLLTERLGEAGLEVLRLGH 212
Query: 273 PARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK------DKNTRREIQK 326
PAR+ ++ S LDA++ D+ +RK+ +AL + K K ++ R +
Sbjct: 213 PARIDAPIIASTLDARIAAHDSYKELKLLRKKAEALRKQAGKYKRNFGAAERAARNHALQ 272
Query: 327 ELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIAC 386
E R L + R + DV + A V+ TL GA S +LD F LV IDEAAQ LE A
Sbjct: 273 EARMLKENARHLEDYIHYDVFQRAQVIACTLVGAASAQLDGYRFPLVFIDEAAQGLEPAT 332
Query: 387 WIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMH 446
WI +L+ R ++AGDH QLPPT++S EA + GL RTLFE++ E ML VQYRM
Sbjct: 333 WIPILRADRVVMAGDHCQLPPTIKSFEAGRAGLSRTLFEKVIQ-RQPEAAVMLEVQYRMP 391
Query: 447 EHIMNWSSKQLYNSKIKAHP-SGVKRTSSTEPTLLLIDIAGCDMEEKKDEED-STMNEGE 504
E IM +S++ Y K++A P + R EP L ID AG E K+++ ST+NE E
Sbjct: 392 EVIMRFSAQTFYKGKLQAAPITETHRLHPNEPILEFIDTAGTGFLEHKEKDSLSTLNERE 451
Query: 505 AEVAMAHAKRLIQS-GV-----HASDIGIITPYAAQVVLLKILRSKDDKLKNME------ 552
A + + ++ I+ G+ +IG+I PY+AQV L+ + + N++
Sbjct: 452 AVALLRYLEQCIRRLGIGHMKQEGWNIGLIAPYSAQVRALRHHIFETFQFPNLKAFSELL 511
Query: 553 -VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
V+++DGFQG+E++ + IS+VR+N E+GFLSD RRMNVA+TRA+R+ ++ D+ T+S
Sbjct: 512 TVNSIDGFQGQERDIMAISLVRANETGEIGFLSDIRRMNVALTRAKRKLIVMGDSATLSH 571
Query: 612 DGFLKRLIEYFEEHAEYLS 630
F I+Y + H Y S
Sbjct: 572 HPFYADFIDYVDRHGSYSS 590
>gi|440750068|ref|ZP_20929312.1| dna-binding protein smubp-2 [Mariniradius saccharolyticus AK6]
gi|436481109|gb|ELP37290.1| dna-binding protein smubp-2 [Mariniradius saccharolyticus AK6]
Length = 642
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 200/551 (36%), Positives = 302/551 (54%), Gaps = 36/551 (6%)
Query: 112 GVVYRLKDSSITVAF--DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAA 169
GV+ ++K ++TV D +P+ + + ++ L +E +YR M+ A+ + + + G
Sbjct: 100 GVINQVKKDTMTVTLSQDSLPDWAFQTRIGVDLLFDEASYREMESAMKSVIQS-EKGRLG 158
Query: 170 GLIPVLFGEQKPTVLKKDIAFKPFN----SNLDHSQKDAISKALSSKNVFMLHGPPGTGK 225
+L GE+ P F P L+ SQ A+ +++K+V ++HGPPGTGK
Sbjct: 159 AFKQILLGEKSPE-------FGPIEPLEVEGLNESQNQALGLVVATKDVAVIHGPPGTGK 211
Query: 226 TTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESAL 285
TTT+V I++ +K S+++ A SN AVD +VE+LV ++ +R+GHPAR+ Q+L L
Sbjct: 212 TTTLVASIVETLKSVSQVMVTAPSNAAVDLLVEKLVTQGIKTLRIGHPARVDEQILAQTL 271
Query: 286 DAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLA--- 342
DA++ + ++ ++K + L K K + E ++ R L + R R + A
Sbjct: 272 DAKIAQHESYKDLKRVKKSVDELRKLASKYKRNYGQEERMQKRRMLDEVARARDEAAQLE 331
Query: 343 ---VTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILA 399
V D+ + VV TL GA LD F +V IDEAAQ LE A WI + K + ++A
Sbjct: 332 DYIVYDIFQETQVVACTLVGAAHSMLDGRKFPVVFIDEAAQGLEPAVWIPVQKAQKVVMA 391
Query: 400 GDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYN 459
GDH QLPPT++S EA + GL TLFE++ + ML VQYRM E I +SS Y
Sbjct: 392 GDHCQLPPTIKSYEAAQGGLAETLFEKVIKR-KPSASHMLNVQYRMPELIAGFSSDFFYR 450
Query: 460 SKIKAHPSG-VKRTSSTEPTLLLIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQ 517
+ A P+ EP L ID AG E+ +EE ST N EA+ + + LI+
Sbjct: 451 RDLHAAPNTRYHFLDEAEPVLEFIDTAGSGFAEQTEEETFSTFNPEEAKFCLGQLESLIK 510
Query: 518 S-GV-----HASDIGIITPYAAQVVLLKILRSKDDKLKNME-------VSTVDGFQGREK 564
G+ A +IG+I PY AQV L + N+ + ++DGFQG+E+
Sbjct: 511 RIGIAKIKTAAWNIGLIAPYKAQVRKFNELLFESYNYPNLRSFSELLTIDSIDGFQGQER 570
Query: 565 EAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+ I++S+VRSN+K E+GFLSD RRMNVA+TRA+R+ +V D+ T+S+ F I+Y E
Sbjct: 571 DIILLSLVRSNTKNEIGFLSDTRRMNVALTRAKRKLIVVGDSATLSAHPFYHAYIDYVES 630
Query: 625 HAEYLSGSEYL 635
H Y S EYL
Sbjct: 631 HGCYHSVYEYL 641
>gi|239049136|ref|NP_001155054.1| immunoglobulin mu binding protein 2 [Nasonia vitripennis]
Length = 905
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 216/598 (36%), Positives = 319/598 (53%), Gaps = 56/598 (9%)
Query: 80 KGDVLP-AHKFGTHDVVVLKPNKADLGSPALGQ---GVVYRLKDSSITVA----FDDIPE 131
+ D LP H D+V+ + S GQ +V + +S+++++ +++I E
Sbjct: 68 RADGLPLEHGLCNGDLVIC------IRSKEKGQTIRAIVNEIGESTLSISTNDDYENIRE 121
Query: 132 EGLNSPLRLEKLANEVTYRRMKDALIQLSKG-VQNGPAAGLIPVLFGEQKPTV------- 183
E + + K ++ TY+ AL L K + + ++ +LF K V
Sbjct: 122 EEI---FTVVKTDSDFTYKSQTRALSFLEKKELHSSSCLEIVRILFDTDKEIVQNLLTSE 178
Query: 184 -------LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQE 236
L + +N NL QK A+ AL + ++ GPPGTGKTTT++EII+Q
Sbjct: 179 DPIPKNTLDDQGSINFYNPNLAKDQKSAVEFALKRRYFAIIQGPPGTGKTTTLIEIIVQL 238
Query: 237 VKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSS 296
K G K+L CA +N+AVDN+V RL + +RLGHP R+ + L+ +LD+ + R D
Sbjct: 239 QKFGKKVLICAPTNVAVDNLVIRLGQTEAKPLRLGHPTRIAKEALKYSLDSYLERDDGFI 298
Query: 297 LASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTT 356
+ DI+K +K L + + K KE+R L KE RKR D +K V+L T
Sbjct: 299 ILKDIKKSIKDLETNIGNSGTKYA----YKEVRELKKEYRKRLIRLTCDTLKKCSVILCT 354
Query: 357 LTGAVS-----RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
L A + + + FD++I+DEA+QA+E + WIA+ + ILAGD QLPP V
Sbjct: 355 LNSASANDGQLQYIPRDHFDVLIVDEASQAMEASTWIAIPNAPKLILAGDINQLPPVVMC 414
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH------ 465
EA K GL +L ER + L QYRM+E IM WSSK+ Y+ ++A
Sbjct: 415 QEATKGGLNISLMERAIKKLNTDCYVRLMRQYRMNEKIMTWSSKKFYDDTLEADDLVKNH 474
Query: 466 -----PSGVKRTSSTEPTLLLIDIAGCDMEEKKD--EEDSTMNEGEAEVAMAHAKRLIQS 518
PS + T ++ ID GC+ EE E+ S N GEA + L++
Sbjct: 475 LLKHLPSVKQEDDLTSEAVVYIDTCGCECEEFNTGVEKASKGNLGEAVIVDKVVTNLVKV 534
Query: 519 GVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK 578
G++ DIG ITPYA QV ++ RS K N+EVSTVDGFQGREKE II+S+VRSN K
Sbjct: 535 GLYHKDIGAITPYALQVDFIR--RSFAAKSLNVEVSTVDGFQGREKEVIILSLVRSNEDK 592
Query: 579 EVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLN 636
E+GF++D RR+NVAVTRARR ++ D+ET+ D + L+++ E++ + EYL+
Sbjct: 593 ELGFVTDFRRLNVAVTRARRSLIVIADSETMEKDDLIVSLLKHIEDNGLLQTAEEYLS 650
>gi|242399980|ref|YP_002995405.1| DNA helicase, UvrD/REP family [Thermococcus sibiricus MM 739]
gi|242266374|gb|ACS91056.1| DNA helicase, UvrD/REP family [Thermococcus sibiricus MM 739]
Length = 716
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 234/676 (34%), Positives = 373/676 (55%), Gaps = 90/676 (13%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNL--KCVDAQTGLMGKT 72
++ +++ + L++LE+EAEI A +K G ILNL K + + G
Sbjct: 62 VKNYIAKLVDLVELEREAEIEAMREEMRRLKGYEREKVGRAILNLNGKIIGEEFG----- 116
Query: 73 LLEFQSTKGDVLPAHK--FGTHDVVVL---KPNKADLGSPALGQGVVYRLKDSSITVAFD 127
F+ K A K G D+VV+ P +DL + +G + I VA +
Sbjct: 117 ---FKLVKYGRKEAFKTEIGVGDLVVISKGNPLASDLVGTVVEKGSRF------IVVALE 167
Query: 128 DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKD 187
+P + +R++ AN++T+RR + L +LS ++G A + ++ G++ P +
Sbjct: 168 TVPSWAFRN-VRIDLYANDITFRRQLENLKKLS---ESGIRA--LKLILGKETPLKSSPE 221
Query: 188 IAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACA 247
F PF+ NL+ SQK+A+S AL S++ F++HGP GTGKT T+VE+I+QEVKRG+KILA A
Sbjct: 222 -EFTPFDRNLNQSQKEAVSYALGSEDFFLIHGPFGTGKTRTLVELIVQEVKRGNKILATA 280
Query: 248 ASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKA 307
SN+AVDN+VERL +V+LVRLGHP+R+ + ES L QV + ++R + +
Sbjct: 281 ESNVAVDNLVERLW-GKVKLVRLGHPSRVSVHLKESTLAFQVESHERYRKVRELRNKAER 339
Query: 308 L-------------------NGKLLK--TKDKNTRREIQKELR------TLSKEERKRQQ 340
L N ++LK + + +R K+++ TL+++ +K +
Sbjct: 340 LAVMRDQYKKPTPQMRRGLTNNQILKLAYRGRGSRGVPAKDIKQMAQWITLNEQIQKLYK 399
Query: 341 LA-------VTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKG 393
A + ++I++ DVVL+T + A + + FD+ IIDEA+QA + I + K
Sbjct: 400 FAEKIESEIIQEIIEDVDVVLSTNSSAALEFIKDAEFDVAIIDEASQATIPSVLIPIAKA 459
Query: 394 SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWS 453
R +LAGDH QLPPT+ S EA + L TLFE+L +LY + ML +QYRM++ +M +
Sbjct: 460 RRFVLAGDHKQLPPTILSEEA--RALSETLFEKLIELYPFK-AKMLEIQYRMNQLLMEFP 516
Query: 454 SKQLYNSKIKAHPS---------GVKRTSSTEP---------TLLLIDIAGCDMEEKKDE 495
S++ YN KIKA S V+ EP L+ +D + + ++
Sbjct: 517 SREFYNGKIKADGSVKDITLADLKVREPFFGEPWDSILKREEPLIFVDTSNRTDKWERQR 576
Query: 496 EDSTMNEGEAEVAMAH--AKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEV 553
+ ST E E + +RL++ G+ IGIITPY QV ++ + D+ +E+
Sbjct: 577 KGSTSRENPLEALLVREIVERLLRMGIKKEWIGIITPYDDQVDSIRSIIQDDE----IEI 632
Query: 554 STVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG 613
TVDG+QGREKE II+S+VRSN K E+GFL D RR+NV++TRA+R+ ++ D+ET+ +
Sbjct: 633 HTVDGYQGREKEIIILSLVRSNKKGELGFLMDLRRLNVSITRAKRKLVVIGDSETLVNHE 692
Query: 614 FLKRLIEYFEEHAEYL 629
KRLI + +++ Y+
Sbjct: 693 TYKRLIHFVKKYGRYI 708
>gi|224124044|ref|XP_002319231.1| predicted protein [Populus trichocarpa]
gi|222857607|gb|EEE95154.1| predicted protein [Populus trichocarpa]
Length = 788
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 249/712 (34%), Positives = 377/712 (52%), Gaps = 117/712 (16%)
Query: 8 EKQSAVS--LQEFVSVMAPLIDLEKEAEISASI-----------TSGASRNLDTAQKKGS 54
EK A+ + EF + M+ L+ +E++AE+ + +S +S+ ++ G
Sbjct: 83 EKAKAIQGRINEFTNQMSELLRIERDAELEFTQEELNAVPTLDESSDSSKPIEFLVSHGQ 142
Query: 55 -------TILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLK-PNKADLGS 106
TI NL V TGL G L+ F+ LP D+V ++ + G+
Sbjct: 143 GQQELCDTICNLYAVSTSTGLGGMHLVLFRVEGNHRLPPTTLSPGDMVCVRICDSRGAGA 202
Query: 107 PALGQGVVYRLKD--SSITVAFDDIPEEGLNSPL--------RLEKLANEVTYRRMKDAL 156
+ QG V L + SI+VA + + S L R+ LA+ VTY R +AL
Sbjct: 203 TSSLQGFVNNLGEDGCSISVALESRHGDPTFSKLSGKSVRIDRIHGLADAVTYERNCEAL 262
Query: 157 IQLSK-GV-QNGPAAGLIPVLFGEQKPTVLKKDIAF-------------------KPFNS 195
+ L K G+ + P+ ++ LFG+ K+D+A+ KPF
Sbjct: 263 MLLQKKGLHKKNPSIAVVATLFGD------KEDVAWLEENDLASWDEADFDEHLGKPF-- 314
Query: 196 NLDHSQKDAISKALSSKNVFML-HGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVD 254
D SQ+ AI+ L+ K F++ GPPGTGK+ + E+I V +G ++L A +N AVD
Sbjct: 315 --DDSQRRAITLGLNKKRPFLIIQGPPGTGKSGLLKELIALAVGKGERVLVTAPTNAAVD 372
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLA----------SDIRKE 304
N+VE+L + +VR+G+PAR+ V +L V NS LA SD+RK+
Sbjct: 373 NMVEKLSNIGLNIVRVGNPARISSAVASKSLGDIV----NSKLAAFRTEFERKKSDLRKD 428
Query: 305 MKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS-- 362
+ KD + I++ L+ L K +K+++ V +V+ +A VVL T TGA
Sbjct: 429 LSHC------LKDDSLAAGIRQLLKQLGKTLKKKEKETVREVLSSAQVVLATNTGAADPL 482
Query: 363 -RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGR 421
R+LD +FDLV++DEA QA+E +CWI +L+G RCILAGD QL P + S +A + GLG
Sbjct: 483 IRRLD--AFDLVVMDEAGQAIEPSCWIPILQGKRCILAGDQCQLAPVILSRKALEGGLGV 540
Query: 422 TLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKR 471
+L ER + L+ + + LT QYRM++ I +W+SK++Y+ +K+ + VK
Sbjct: 541 SLLERASTLHEGVLATKLTTQYRMNDAIASWASKEMYSGLLKSSSTVASHLLVDTPFVKP 600
Query: 472 TSSTEPTLLLIDI--------AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHAS 523
T T+ LLL+D GC+ S NEGEA++ + H LI SGV +
Sbjct: 601 TWITQCPLLLLDTRMPYGSLSVGCEEHLDPAGTGSFYNEGEADIVVQHVSSLIFSGVRPT 660
Query: 524 DIGIITPYAAQVVLLKILRSKDDKLK---NMEVSTVDGFQGREKEAIIISMVRSNSKKEV 580
I + +PY AQV ++LR + D+L +E++T+D FQGRE +A+IISMVRSN+ V
Sbjct: 661 AIAVQSPYVAQV---QLLRERLDELPEADGVEIATIDSFQGREADAVIISMVRSNTLGAV 717
Query: 581 GFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRL---IEYFE--EHAE 627
GFL D +R NVA+TRAR+ +VCD+ T+ + FL RL I YF +HAE
Sbjct: 718 GFLGDSKRTNVAITRARKHVAVVCDSSTICHNTFLARLLRHIRYFGRVKHAE 769
>gi|390960972|ref|YP_006424806.1| DNA helicase [Thermococcus sp. CL1]
gi|390519280|gb|AFL95012.1| DNA helicase [Thermococcus sp. CL1]
Length = 660
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 233/674 (34%), Positives = 368/674 (54%), Gaps = 92/674 (13%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
+L +F+S + LI++E++AEI A + +K G TIL L ++G+ L
Sbjct: 6 TLTKFISHLKVLIEMERKAEIEAMRAEMRRLSGREREKVGRTILGLNG-----KVVGEEL 60
Query: 74 LEFQSTKG-DVLPAHKFGTHDVVVLK---PNKADLGSPALGQGVVYRLKDSSITVAFDDI 129
F G D + D+VV+ P K+DL + +G + ITVA + +
Sbjct: 61 GYFLVKYGRDREIKTEISVGDLVVVSKRDPLKSDLIGTVVEKGKRF------ITVALETV 114
Query: 130 PEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIA 189
PE L +RL+ AN++T++R + L L ++G A + + G ++P ++I
Sbjct: 115 PEWALKG-VRLDLYANDITFKRWLENLDSLR---ESGRKA--LELYLGLREPEE-SEEID 167
Query: 190 FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAAS 249
F PF+ NL+ SQ+ A+++AL S + F++HGP GTGKT T+VE+I QEV RG+K+LA A S
Sbjct: 168 FTPFDRNLNASQRKAVARALGSDDFFLIHGPFGTGKTRTLVELIRQEVARGNKVLATAES 227
Query: 250 NIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALN 309
N+AVDN+VERL +++VR+GHP+R+ + E+ L + R + L ++R E++ +
Sbjct: 228 NVAVDNLVERLANSGLKVVRIGHPSRVSKNLHETTLAYLITRHE---LYGELR-ELRVIG 283
Query: 310 GKLLKTKDKNTR--------------------------------RE------IQKELRTL 331
L + +D T+ RE I ++++
Sbjct: 284 QNLAEKRDTFTKPSPKYRRGLSDREILRLASKGIGTRGVPARLIREMAEWIKINRQVQKT 343
Query: 332 SKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL 391
+ RK ++ ++I+ ADVVLTT + A +D S+D+ +IDEA QA + I +
Sbjct: 344 FDDARKLEERIAREIIREADVVLTTNSSAGLEVVDYGSYDVAVIDEATQATIPSVLIPIN 403
Query: 392 KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN 451
+ R +LAGDH QLPPT+ S +A K LG+TLFE L + Y E + MLTVQYRM+E +M
Sbjct: 404 RARRFVLAGDHKQLPPTILSEKA--KELGKTLFEGLIERY-PEKSEMLTVQYRMNERLMR 460
Query: 452 WSSKQLYNSKIKAHPS---------GVKRTSSTE---------PTLLLIDIAGCD--MEE 491
+ S++ Y+ +I+A S GV+ + L+ ID A + E
Sbjct: 461 FPSREFYDGRIEADESVRSITLVDLGVESPDEGDVWAEVLKPGNVLVFIDTARRENRFER 520
Query: 492 KKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNM 551
++ +S N EA + +RL++ GV + IG+ITPY Q L+ L ++ +
Sbjct: 521 QRYGSESRENPLEARLVREAIERLLKLGVRSEWIGVITPYDDQRDLISSLLPEE-----V 575
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
EV TVDG+QGREKE I++S VRSN + E+GFL D RR+NV++TRA+R+ L+ D+ T+S+
Sbjct: 576 EVKTVDGYQGREKEVIVLSFVRSNKRGELGFLKDLRRLNVSLTRAKRKLILIGDSSTLSA 635
Query: 612 DGFLKRLIEYFEEH 625
KRL+E+ E
Sbjct: 636 HATYKRLVEFVRER 649
>gi|323451631|gb|EGB07507.1| hypothetical protein AURANDRAFT_64586 [Aureococcus anophagefferens]
Length = 1181
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 236/680 (34%), Positives = 348/680 (51%), Gaps = 115/680 (16%)
Query: 51 KKGSTILNLKC--VDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPA 108
++G ++L+L+ VDA G G++ + Q+ G +PAHK G V L+ K + PA
Sbjct: 117 RRGVSVLHLRVAEVDA-AGPGGRSRVVLQAAHGGPIPAHKLGARSEVRLRAKKNKV--PA 173
Query: 109 LGQ-------------GVVYRLKDSSITVAFDDIPE--EGLNSPLRLEKLANEVTYRRMK 153
G+ GVV + D+SI D PE E L LRL+ +AN T+
Sbjct: 174 AGRRLDGDGDDVSEVSGVVSKATDASIEFLTDAAPEAVESLRGSLRLDAVANARTH---- 229
Query: 154 DALIQLSKGVQNGPAAGLIP---------VLFGEQK---PTVLKKDIAFKPFNSNLDHSQ 201
D L + ++ V A P +L G + P +L+ A +LD Q
Sbjct: 230 DVLARAARDVAAAAAHKAAPDGTRALRDALLGGRARRPPPALLQPSSA-----PHLDDHQ 284
Query: 202 KDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLV 261
+ +++A + +F++HGPPGTGKTTTVVE+I + +G ++LACAASN+AVDN++ER+
Sbjct: 285 RACVARAEAEPALFLVHGPPGTGKTTTVVEVIARAAAKGQRVLACAASNVAVDNLLERVA 344
Query: 262 --------PHRVRLVRLGHPARLLPQVLESALDAQVLR-GDNSSLASDIRKEMKALNGKL 312
P L+RLGHPARL +++ +VLR D + + D R E++ L
Sbjct: 345 AAFRAAKSPRG--LLRLGHPARLSEAASRYSME-EVLRTADGADVLEDARAELRNLRKDA 401
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVL------------------ 354
+ R ++E R + E R R++ DV+K VV
Sbjct: 402 AADRASAKRTAARRETRVVRAELRDREKKLAKDVVKRCAVVFRAGQESEIPNFKASYLGR 461
Query: 355 ------TTLTGAVSRKLDNTS-FDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPP 407
T GA SR LD+ FDLV++DE AQALEI+CWI LL+G R +LAGDH QL P
Sbjct: 462 FPLVVFATNVGAASRLLDDAPPFDLVVVDECAQALEISCWIPLLRGKRAVLAGDHRQLAP 521
Query: 408 TVQSVEAEKKG-----LGRTLFERLAD----LYGD-EVTSMLTVQYRMHEHIMNWSSKQL 457
TV+ + + L TLFERL D G+ ++ +L QYRMH I W+S
Sbjct: 522 TVKCDDGDPTNAPAALLKATLFERLMDDRRPGRGEAHISLLLATQYRMHGDISEWASAAT 581
Query: 458 YNSKIKAHPSGVKR---TSSTEPT----------LLLIDIAG------CDMEEKKDEED- 497
Y+ +++A PS V R S P ++ +D AG D + + D ++
Sbjct: 582 YDGRLRAAPSCVARDLYAGSFLPPPVNPDDAIRPMVHVDTAGLGFFDDSDAKTRDDADEH 641
Query: 498 ---STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVS 554
S N EA V +H L+ +G+ A+ I +I PY AQV L+ +E
Sbjct: 642 GAASVANPREAAVVASHVALLLAAGLDAAQICVIAPYNAQVAALRGALEG----TGVEAR 697
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGF 614
TVDG+QG E++A+++S+ RSN + VGFL+D RR+NVAVTRARR +VCD +TV S F
Sbjct: 698 TVDGYQGGERDAVVLSLTRSNEARAVGFLADERRLNVAVTRARRHVAVVCDADTVRSSPF 757
Query: 615 LKRLIEYFEEHAEYLSGSEY 634
+ L+++ + +Y+S S Y
Sbjct: 758 IAALLDHVADAGDYVSASAY 777
>gi|404449013|ref|ZP_11014005.1| type III restriction enzyme, res subunit [Indibacter alkaliphilus
LW1]
gi|403765737|gb|EJZ26615.1| type III restriction enzyme, res subunit [Indibacter alkaliphilus
LW1]
Length = 642
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 208/584 (35%), Positives = 321/584 (54%), Gaps = 37/584 (6%)
Query: 80 KGDVLPAHKFGTHDVVVLKPNKADLGSPALG-QGVVYRLKDS--SITVAFDDIPEEGLNS 136
+ D AH F + V + N SP GV+ ++K ++T+ +++PE
Sbjct: 67 RSDSKQAHLFQSGKSVSIFSNHELYSSPKNRINGVINQIKKDVMTVTLQLEELPEWFHKG 126
Query: 137 PLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKD-IAFKPFNS 195
+ ++ L +E +YR M+ AL+ +SK N L VL GE++ + + IA NS
Sbjct: 127 KIGIDLLFDEASYREMEIALLAVSKA-DNSRLGELKRVLLGEKEAAFQQLELIAIDRLNS 185
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDN 255
Q +A++ A + ++ ++HGPPGTGKTTT+V I + ++ S++L CA SN AVD
Sbjct: 186 R----QNEAVAMASKATDLAIIHGPPGTGKTTTLVAAIEKSLETNSQVLVCAPSNAAVDL 241
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALN-----G 310
+VE+L + +R+GHPAR+ Q+L LDA++ N + D+++ K+++ G
Sbjct: 242 LVEKLSERNISALRMGHPARVEEQILLQTLDAKIA---NHASYKDLKRLKKSIDELVKMG 298
Query: 311 KLLKT----KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLD 366
K K +++ RR +E E + + V D+ +++ V+ TL GA S L
Sbjct: 299 KKYKRSFGHEERMQRRRYFEEADRCRDEAKSLEDYIVYDIFQSSQVIACTLVGAASSYLK 358
Query: 367 NTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFER 426
+ SF +V IDEA Q LE A WI + K + ++AGDHLQLPPT++S EA K GLG TLFE+
Sbjct: 359 SFSFPVVFIDEAGQGLEAATWIPIQKAKKVVMAGDHLQLPPTIKSFEASKSGLGITLFEK 418
Query: 427 LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHP-SGVKRTSSTEPTLLLIDIA 485
A L ML QYRMHE IM +S++ Y ++ A P + EP L +D +
Sbjct: 419 -AILRQPSSAVMLREQYRMHELIMGFSNRHFYQGELMAAPNTQAHYILEEEPVLEFVDTS 477
Query: 486 GCDMEEKKDEED-STMNEGEAEVAMAHAKRLI------QSGVHASDIGIITPYAAQVVLL 538
G E+ +EE ST N EA A+ + + + Q IG+I PY AQV L
Sbjct: 478 GSGYNEQVEEESLSTYNLEEARFALNYLESFVKRIGLRQLKEREFSIGLIAPYRAQVRRL 537
Query: 539 KILRSKDDKLKNME-------VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNV 591
L + N+ + ++DGFQGRE++ ++IS+VRSN+K E+GFL+D RRMNV
Sbjct: 538 NELLFDTYEFPNLRSYSEFLTIDSIDGFQGRERDVMLISLVRSNAKGEIGFLADTRRMNV 597
Query: 592 AVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
A+TRA+R+ ++ D+ T+SS F ++Y EE Y S E++
Sbjct: 598 ALTRAKRKMIVIGDSATLSSHSFYTAFLDYVEEKNCYKSVYEFM 641
>gi|18976944|ref|NP_578301.1| dna2-nam7 helicase family protein [Pyrococcus furiosus DSM 3638]
gi|18892566|gb|AAL80696.1| dna2-nam7 helicase family protein [Pyrococcus furiosus DSM 3638]
Length = 655
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 219/597 (36%), Positives = 342/597 (57%), Gaps = 85/597 (14%)
Query: 93 DVVVLK---PNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTY 149
D+VV+ P K+DL + +G + I VA + +PE L +R++ AN++T+
Sbjct: 77 DLVVISKRDPLKSDLLGTVVEKGKRF------IVVALEPVPEWALRD-VRIDLYANDITF 129
Query: 150 RRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKAL 209
+R + L ++ K G A + G +P+ ++++F+PF+ +L+ SQ+ AI+KAL
Sbjct: 130 KRWIENLDRVRKA---GKKA--LEFYLGLDEPS-QGEEVSFEPFDKSLNPSQRKAIAKAL 183
Query: 210 SSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVR 269
S++ F++HGP GTGKT T+VE+I QEVKRG+K+LA A SN+AVDN+VERL V++VR
Sbjct: 184 GSEDFFLIHGPFGTGKTRTLVELIRQEVKRGNKVLATAESNVAVDNLVERLAKDGVKIVR 243
Query: 270 LGHPARLLPQVLESAL-----------DAQVLRGDNSSLASD----------IRKEM--- 305
+GHP+R+ + E+ L + + LR SLA R+ +
Sbjct: 244 VGHPSRVSRHLHETTLAYLITQHELYGELRELRVIGQSLAEKRDTYTKPTPKFRRGLSDA 303
Query: 306 ------------KALNGKLLKTKDKNTR--REIQKELRTLSKEERKRQQLAVTDVIKNAD 351
+ L+ +L+K + + R++QK ++ RK ++ D+I+ AD
Sbjct: 304 EIIKLAEKGRGARGLSARLIKEMAEWIKLNRQVQKAF----EDARKLEERIARDIIREAD 359
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
VVLTT + A +D T +D+ IIDEA QA + I L K R ILAGDH QLPPT+ S
Sbjct: 360 VVLTTNSSAALDVVDATDYDVAIIDEATQATIPSILIPLNKVDRFILAGDHKQLPPTILS 419
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS---- 467
+EA++ L TLFE L + Y + + MLT+QYRM+E IM + S++ Y+ +I A S
Sbjct: 420 LEAQE--LSHTLFEGLIEKYPWK-SEMLTIQYRMNERIMEFPSREFYDGRIVADESVKNI 476
Query: 468 -----GVKRTSS------TEPTLLLIDIAGCDMEEKKDEE----DSTMNEGEAEVAMAHA 512
G+K +S +P +L+ I C +E + + + +S N EA++
Sbjct: 477 TLADLGIKVNASGIWRDILDPNNVLVFIDTCMLENRFERQRRGSESRENPLEAKIVSKIV 536
Query: 513 KRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMV 572
++L++SGV A +G+ITPY Q L+ + + + +EV TVDG+QGREKE II+S V
Sbjct: 537 EKLLESGVKAEMMGVITPYDDQRDLISL-----NVPEEVEVKTVDGYQGREKEVIILSFV 591
Query: 573 RSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYL 629
RSN E+GFL D RR+NV++TRA+R+ ++ D+ T+SS +RLIE+ E Y+
Sbjct: 592 RSNKAGEIGFLKDLRRLNVSLTRAKRKLIMIGDSSTLSSHETYRRLIEHVREKGLYV 648
>gi|397651076|ref|YP_006491657.1| dna2-nam7 helicase family protein [Pyrococcus furiosus COM1]
gi|393188667|gb|AFN03365.1| dna2-nam7 helicase family protein [Pyrococcus furiosus COM1]
Length = 655
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 219/597 (36%), Positives = 342/597 (57%), Gaps = 85/597 (14%)
Query: 93 DVVVLK---PNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTY 149
D+VV+ P K+DL + +G + I VA + +PE L +R++ AN++T+
Sbjct: 77 DLVVISKRDPLKSDLLGTVVEKGKRF------IVVALETVPEWALRD-VRIDLYANDITF 129
Query: 150 RRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKAL 209
+R + L ++ K G A + G +P+ ++++F+PF+ +L+ SQ+ AI+KAL
Sbjct: 130 KRWIENLDRVRKA---GKKA--LEFYLGLDEPS-QGEEVSFEPFDKSLNPSQRKAIAKAL 183
Query: 210 SSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVR 269
S++ F++HGP GTGKT T+VE+I QEVKRG+K+LA A SN+AVDN+VERL V++VR
Sbjct: 184 GSEDFFLIHGPFGTGKTRTLVELIRQEVKRGNKVLATAESNVAVDNLVERLAKDGVKIVR 243
Query: 270 LGHPARLLPQVLESAL-----------DAQVLRGDNSSLASD----------IRKEM--- 305
+GHP+R+ + E+ L + + LR SLA R+ +
Sbjct: 244 VGHPSRVSRHLHETTLAYLITQHELYGELRELRVIGQSLAEKRDTYTKPTPKFRRGLSDA 303
Query: 306 ------------KALNGKLLKTKDKNTR--REIQKELRTLSKEERKRQQLAVTDVIKNAD 351
+ L+ +L+K + + R++QK ++ RK ++ D+I+ AD
Sbjct: 304 EIIKLAEKGRGARGLSARLIKEMAEWIKLNRQVQKAF----EDARKLEERIARDIIREAD 359
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
VVLTT + A +D T +D+ IIDEA QA + I L K R ILAGDH QLPPT+ S
Sbjct: 360 VVLTTNSSAALDVVDATDYDVAIIDEATQATIPSILIPLNKVDRFILAGDHKQLPPTILS 419
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS---- 467
+EA++ L TLFE L + Y + + MLT+QYRM+E IM + S++ Y+ +I A S
Sbjct: 420 LEAQE--LSHTLFEGLIEKYPWK-SEMLTIQYRMNERIMEFPSREFYDGRIVADESVKNI 476
Query: 468 -----GVKRTSS------TEPTLLLIDIAGCDMEEKKDEE----DSTMNEGEAEVAMAHA 512
G+K +S +P +L+ I C +E + + + +S N EA++
Sbjct: 477 TLADLGIKVNASGIWRDILDPNNVLVFIDTCMLENRFERQRRGSESRENPLEAKIVSKIV 536
Query: 513 KRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMV 572
++L++SGV A +G+ITPY Q L+ + + + +EV TVDG+QGREKE II+S V
Sbjct: 537 EKLLESGVKAEMMGVITPYDDQRDLISL-----NVPEEVEVKTVDGYQGREKEVIILSFV 591
Query: 573 RSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYL 629
RSN E+GFL D RR+NV++TRA+R+ ++ D+ T+SS +RLIE+ E Y+
Sbjct: 592 RSNKAGEIGFLKDLRRLNVSLTRAKRKLIMIGDSSTLSSHETYRRLIEHVREKGLYV 648
>gi|431799922|ref|YP_007226826.1| type III restriction enzyme, res subunit [Echinicola vietnamensis
DSM 17526]
gi|430790687|gb|AGA80816.1| Type III restriction enzyme, res subunit [Echinicola vietnamensis
DSM 17526]
Length = 643
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 214/647 (33%), Positives = 356/647 (55%), Gaps = 35/647 (5%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
+QE + + L+ E + ++ S ++ QK+G ++ V + GL + ++
Sbjct: 4 IQEELKITLQLLKKEWKEDLEQYRAKTLSASVADKQKEGICWYPVQLVKTKVGLGDRLIV 63
Query: 75 EFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF--DDIPEE 132
E + + D +H F + V L N +D G+P GVV +K +++ V + P+
Sbjct: 64 EVE--RADTRLSHGFQSGKTVSLFSNFSD-GAPLRTNGVVNMVKKNTMVVTLMGHEWPDW 120
Query: 133 GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV---LKKDIA 189
+ L ++ +E +YR M+ A+ Q+ K + G L VL G++K + L K +
Sbjct: 121 LHDGKLGVDLHFDEASYREMEYAVQQVIKAGE-GRLGQLRNVLLGQEKASFVRGLPKSVE 179
Query: 190 FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAAS 249
+L+HSQ +A+ L+++ V ++HGPPGTGKTTT+V+ I + ++ ++L CA S
Sbjct: 180 ----APHLNHSQVEAVEMVLAAQEVALVHGPPGTGKTTTMVQAIEETLRSHRQVLVCAPS 235
Query: 250 NIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK---EMK 306
N AVD +VE+L+ + +R+GHPAR+ ++LE LDA++ + + +RK E +
Sbjct: 236 NAAVDLLVEKLLAIGLSTLRIGHPARVDDELLEQTLDAKIAQHSSFRDLKKLRKAAEEYR 295
Query: 307 ALNGKL---LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSR 363
L K ++ R+++ E + + R + + DV + V+ TTL GA
Sbjct: 296 KLGRKYKRNFGAAERQQRKQLFAEASKVKEAARHLEDYILYDVFQQNQVIATTLVGANHP 355
Query: 364 KLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTL 423
L +F +V IDEAAQ LE A WI +LK + ++AGDH QLPPT++S EA K GL TL
Sbjct: 356 VLKGMAFPVVFIDEAAQGLEPATWIPVLKAQKIVMAGDHCQLPPTIKSYEAAKDGLSETL 415
Query: 424 FERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHP-SGVKRTSSTEPTLLLI 482
FE++ E + ML VQYRM E IM +SS+ Y+ +++A + E + I
Sbjct: 416 FEKVIQ-RQPEASRMLRVQYRMPELIMRFSSEYFYHGQLEAAALTDEHFLGHDERVMAYI 474
Query: 483 DIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQS-GV-----HASDIGIITPYAAQV 535
D AG E +++ S +N EA + ++L++ GV A IG+I+PY AQV
Sbjct: 475 DTAGSGFGEHLEKDSLSKLNTDEARFGLGMLEKLVEKIGVSTFKEKAFTIGVISPYKAQV 534
Query: 536 VLLKILRSKDDKLKNME-------VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
L L + + +N+ + T+DGFQG+E++ ++ISMVRSN + E+GFL+D RR
Sbjct: 535 KKLAELMEEGSEYENLRQLSDHVTIGTIDGFQGQERDVVLISMVRSNDEGEIGFLADTRR 594
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
MNVA+TRA+R+ +V D+ T+S+ F ++ +++ ++ Y S EY+
Sbjct: 595 MNVALTRAKRKLMVVGDSGTLSTHPFYQKFLDFVNDNGLYSSIYEYM 641
>gi|401883858|gb|EJT48042.1| DNA helicase [Trichosporon asahii var. asahii CBS 2479]
gi|406696230|gb|EKC99524.1| DNA helicase [Trichosporon asahii var. asahii CBS 8904]
Length = 721
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 240/669 (35%), Positives = 341/669 (50%), Gaps = 129/669 (19%)
Query: 74 LEFQSTKGDVLPAHKFGTHDVV-----VLKPNKADLGSPALG--QGVVYRLKDSSITVAF 126
L + +T+ LP H F D V V P K G L +GVVY++ I+VA
Sbjct: 59 LAYHTTQA--LPPHTFRPGDPVRVEEYVSAPKKGKAGKEELPGVEGVVYKVGPVKISVAV 116
Query: 127 D----DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAG----------LI 172
D+PE LR+ KLAN V + RM+ L L + V P AG L+
Sbjct: 117 SEGDVDLPER-----LRIVKLANSVVFDRMRKTLEHLRRLVV--PEAGASTPSADNMMLV 169
Query: 173 PVLFGEQKPTVLK------------KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGP 220
L G QKPT K +D + L+ SQK+AI L + +V +HGP
Sbjct: 170 NALLGMQKPTWSKTVSAPTLQNAEAEDGTIEWIGERLNDSQKEAIDFCLRADSVACIHGP 229
Query: 221 PGTGKTTTVVEIILQEVKRG--------SKILACAASNIAVDNIVERLVPHRVR------ 266
PGTGKT T+VE+ILQ + R +IL SN+A+DN++ RL H R
Sbjct: 230 PGTGKTHTLVELILQFLARPVQPGGAVPPRILVTTPSNLALDNLLARLS-HVARTDPKAG 288
Query: 267 -------LVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDK- 318
++RLGHP+R+ +L + LD + + GD +L +DI E+K L K + +
Sbjct: 289 ALLPPGSILRLGHPSRVSKDLLPATLDYKAVHGDAGALVADIGNEIKGHLSDLGKKRGER 348
Query: 319 -----NTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLV 373
R E E+R L +E R R+ V V+ A VVL T A SR+++N +FD+
Sbjct: 349 GAVKGKARGEKWGEVRELRREYRAREAKVVKTVVGEARVVLATCHSAGSRQINNVNFDVA 408
Query: 374 IIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS-------------VEAEKKGLG 420
+IDEA QALE W+ +LK + +LAGD QLPPT+ S VE + K L
Sbjct: 409 VIDEATQALEPVAWVPILKAKKLVLAGDPQQLPPTITSKPDKLPKLKDDAKVEDKAKDLS 468
Query: 421 ------------RTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSG 468
TLF+RL DLYG + +L VQYRM+E I + SK LY ++ + PS
Sbjct: 469 LQPKLRPPRTLETTLFDRLEDLYGAGIKRILKVQYRMNEKIAEFPSKTLYGGELVSDPSV 528
Query: 469 VKRT---------------SSTEPTLLLIDIAGCDMEEKKDEED-------------STM 500
T + P ++ D AGCD E +DEED S
Sbjct: 529 ATHTLMDLPSVETDGEDAEEALSPPVIFYDTAGCDFRE-RDEEDELALAKRKEGEGGSKS 587
Query: 501 NEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQV-VLLKILRSKDDKLKNMEVSTVDGF 559
NE EA++ +RL+ GV ++G++ PY AQV VL K+LR ++ NM + TVDG
Sbjct: 588 NENEADIVARVVRRLVSLGVPEEEVGVVVPYQAQVAVLAKMLR---EEFPNMTIGTVDGL 644
Query: 560 QGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS-SDGFLKRL 618
QG+E++A+++S+VRSN K +VGFL +R+NVA+TR RRQ +V D+ETV+ +LK
Sbjct: 645 QGQERDAVVLSLVRSNEKGDVGFLGQYKRLNVAMTRPRRQLVVVGDSETVAKGSAYLKSW 704
Query: 619 IEYFEEHAE 627
I++ E++A+
Sbjct: 705 IKWLEDNAD 713
>gi|311746247|ref|ZP_07720032.1| DNA-binding protein SMUBP-2 [Algoriphagus sp. PR1]
gi|126576477|gb|EAZ80755.1| DNA-binding protein SMUBP-2 [Algoriphagus sp. PR1]
Length = 642
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 199/535 (37%), Positives = 302/535 (56%), Gaps = 26/535 (4%)
Query: 122 ITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKP 181
+T+ D+IP+ L ++ L +E +YR M+ AL ++ +N L VL GE+ P
Sbjct: 112 VTLQADEIPDWMEGGRLGVDLLFDEASYREMEFALKKMM-SEENKRVEELKHVLLGEKAP 170
Query: 182 TVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS 241
D +K N NL+ SQ A ++K+V ++HGPPGTGKTTT++E I Q V G
Sbjct: 171 QF--NDTPYKS-NPNLNFSQNQACQLISNAKDVAVVHGPPGTGKTTTLIEAIEQAVTAGQ 227
Query: 242 KILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDI 301
IL A SN AVD +VE+L+ + +RLGHPAR+ ++L LDA+ + +
Sbjct: 228 SILVSAPSNAAVDLLVEKLIDQGIETLRLGHPARVEEKILNQTLDAKTAFHSSYRDLKKL 287
Query: 302 RKE------MKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLT 355
RKE + + +++ R+ + E+ L + + ++ D+ + V +
Sbjct: 288 RKETDQYLKLAKQYKRKFGPEERAQRKLMYAEVSRLREASKSLEEYIQYDIFQKTKVFAS 347
Query: 356 TLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAE 415
TL GA S L FD+V IDEAAQ LE A WI +LK + + AGDH QLPPT++S +A
Sbjct: 348 TLVGASSYSLKGMEFDVVFIDEAAQGLEAATWIPILKAKKVVFAGDHCQLPPTIKSYQAA 407
Query: 416 KKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST 475
++GL TLFE++ + + ML VQYRM E IM +S++Q Y +++A + T
Sbjct: 408 QEGLAETLFEKVI-ARKSQASQMLQVQYRMPEVIMGFSNEQFYKGELQAAENTKLHTFPG 466
Query: 476 EPTLL-LIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLI-QSGV-----HASDIGI 527
E L ID AG ++K+ E ST N EA A + +I + G+ IG+
Sbjct: 467 EDQQLEWIDTAGAGYNDQKEAESLSTCNPEEAAFACRYLNEMIVRIGIGNFKQEGWTIGL 526
Query: 528 ITPYAAQVVLLKILRSKDDKLKNME-------VSTVDGFQGREKEAIIISMVRSNSKKEV 580
I PY AQV LL+ L + + N++ + TVDGFQG+E++ ++IS+ RSN K E+
Sbjct: 527 IAPYGAQVRLLRSLIFEGFEYPNLKAFSDLITIDTVDGFQGQERDLMLISLTRSNEKGEI 586
Query: 581 GFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
GFL+D RRMNVA+TRA+R+ LV D+ T++ + F +L++YFE++ Y S E+L
Sbjct: 587 GFLADERRMNVALTRAKRKLVLVGDSSTLALNPFFDQLLQYFEKNNGYRSVWEFL 641
>gi|294506246|ref|YP_003570304.1| DNA helicase [Salinibacter ruber M8]
gi|294342574|emb|CBH23352.1| Putative DNA helicase [Salinibacter ruber M8]
Length = 766
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 214/647 (33%), Positives = 326/647 (50%), Gaps = 81/647 (12%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPAL 109
+ +G +L ++ D GL G + + KG LP H+ D+V++ +K D
Sbjct: 120 EDRGRALLRMRGRDEGEGLGGHHVKLMREQKGQPLPDHEIRVGDLVMI--SKTDPLRDDN 177
Query: 110 GQGVVYRLKDSSITVAFDDIPE-------------EGLNSPLRLEKLANEVTYRRMKDAL 156
G V ++ + SIT +FD P+ E + S LR++ N++ Y+RM+DAL
Sbjct: 178 PTGTVTQVTNYSITASFDPKPDGWVFGKGLRPDRREEVVSGLRVDLYVNDIPYQRMQDAL 237
Query: 157 IQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFM 216
QL +G L V G P + NS L+ +Q+ A+ KA+++ +V +
Sbjct: 238 AQLPTA--DGALKQLRDVSTGVASPAATEPATIDDWHNSALNDAQRRAVRKAVATDDVHL 295
Query: 217 LHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARL 276
+HGPPGTGKTTT E++ Q V RG +LA AASN AVDN+V L +VRLGHPAR+
Sbjct: 296 IHGPPGTGKTTTATEVLQQCVDRGESVLATAASNTAVDNVVAFLAEQGTDVVRLGHPARV 355
Query: 277 LPQVLESALDAQVLRGDNSSLAS----------DIRKEMKALNGKLLKTKDKNTRRE--- 323
++ LDAQ+ D + D ++++ A +G+ + +E
Sbjct: 356 NDRLRTHTLDAQIEDTDTHRRSQQKREKAFAVLDRQEDLTAPSGRWRRGMSDRKIKERAE 415
Query: 324 ---------------------IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS 362
+Q+ L E +Q A+ +V++ ADVV +T + A S
Sbjct: 416 QGRGSRGVPPERIEEMAAWLALQERADALFDEAEALEQEAIDEVLRAADVVCSTNSTAGS 475
Query: 363 RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRT 422
LD +FD ++IDEA QA +CWI + R +L GDH QLPPT+Q+ EA ++GL RT
Sbjct: 476 DLLDGHTFDTLVIDEATQATAPSCWIPMTHARRAVLVGDHKQLPPTIQNQEAARRGLRRT 535
Query: 423 LFERLADLY------GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS-- 474
LFERLA + + S+L QYRMHE IM + ++ Y+ +++A + RT +
Sbjct: 536 LFERLAHHHETAPESPGSIRSLLRRQYRMHETIMGFPNRTFYDGRLEADDTARHRTLAGL 595
Query: 475 -----------------TEPTLLLIDIAGCDM-EEKKDEEDSTMNEGEAEVAMAHAKRLI 516
E L+ +D +G D E ++ S N EA++ L+
Sbjct: 596 GVPEHALPADERRAILDPEAPLVFVDTSGIDAPEHQRSGSHSRENPREADLIAQLTTALL 655
Query: 517 QSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNS 576
++G+ S I +I+PY QV + + D E TVDGFQGREKE +++S+VRSN
Sbjct: 656 EAGMAPSAIAVISPYDDQVDRIDRALAPD----GPETDTVDGFQGREKEIVLLSLVRSND 711
Query: 577 KKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFE 623
+ +GFL + RR NVAVTRA R+ +V D TV++ L + Y E
Sbjct: 712 RGAIGFLDEPRRFNVAVTRAERKAVVVGDASTVAAADVLGAFVRYAE 758
>gi|297737213|emb|CBI26414.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 248/711 (34%), Positives = 372/711 (52%), Gaps = 104/711 (14%)
Query: 1 MEGRKTKEKQSAVSLQEFVSVMAPLIDLEKEAEI-----------SASITSGASRNLD-- 47
ME K K QS + EF M+ L+ +E+++E+ + +S +S+ ++
Sbjct: 80 MELDKAKAIQSRID--EFTKRMSELLQIERDSELEFTQEELNAVPTPDESSDSSKPIEFL 137
Query: 48 -----TAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLK-PNK 101
Q+ TI NL V GL G L+ F+ LP D+V ++ +
Sbjct: 138 VSHGQAQQELCDTICNLNAVSTFIGLGGMHLVLFKVEGNHRLPPTTLSPGDMVCVRICDS 197
Query: 102 ADLGSPALGQGVVYRL-KDS-SITVAFDDIPEEGLNSPL--------RLEKLANEVTYRR 151
G+ + QG V L KD SI+VA + + S L R+ LA+ +TY R
Sbjct: 198 RGAGATSCMQGFVDSLGKDGCSISVALESRHGDPTFSKLFGKSVRIDRIHGLADALTYER 257
Query: 152 MKDALIQLSK-GVQN-GPAAGLIPVLFGEQKPTVLKKDIAFKPFN--------------- 194
+AL+ L K G+Q P+ ++ LFG+ K+D+A+ N
Sbjct: 258 NCEALMLLQKNGLQKKNPSIAVVATLFGD------KEDVAWLEENDLVDWAEVGLDELLE 311
Query: 195 -SNLDHSQKDAISKALSSKN-VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIA 252
D SQ+ AI+ L+ K + ++ GPPGTGKT + E+I V++G ++L A +N A
Sbjct: 312 SGAYDDSQRRAIALGLNKKRPILIIQGPPGTGKTVLLKELIALAVQQGERVLVTAPTNAA 371
Query: 253 VDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSL----------ASDIR 302
VDN+VE+L V +VR+G+PAR+ V +L V NS L SD+R
Sbjct: 372 VDNMVEKLSNIGVNIVRVGNPARISSAVASKSLGEIV----NSKLENFLTEFERKKSDLR 427
Query: 303 KEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA-- 360
K+++ KD + I++ L+ L K +K+++ V +V+ +A VVL T TGA
Sbjct: 428 KDLRHC------LKDDSLAAGIRQLLKQLGKALKKKEKETVKEVLSSAQVVLATNTGAAD 481
Query: 361 -VSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
V R+LD +FDLVIIDEA QA+E +CWI +L+G RCI+AGD QL P + S +A + GL
Sbjct: 482 PVIRRLD--AFDLVIIDEAGQAIEPSCWIPILQGKRCIIAGDQCQLAPVILSRKALEGGL 539
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNS----------KIKAHPSGV 469
G +L ER A L+ + + + LT QYRM++ I +W+SK++Y + V
Sbjct: 540 GVSLLERAATLHEEVLATKLTTQYRMNDAIASWASKEMYGGSLKSSSSVFSHLLVDSPFV 599
Query: 470 KRTSSTEPTLLLIDI--------AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVH 521
K T+ LLL+D GC+ S NEGEA++ + H LI +GV
Sbjct: 600 KPAWITQCPLLLLDTRMPYGSLSVGCEEHLDPAGTGSFYNEGEADIVVQHVLSLISAGVS 659
Query: 522 ASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVG 581
+ I + +PY AQV LL+ + + +EV+T+D FQGRE +A+IISMVRSN+ VG
Sbjct: 660 PTAIAVQSPYVAQVQLLRDRLDEIPEAVGVEVATIDSFQGREADAVIISMVRSNTLGAVG 719
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFE-----EHAE 627
FL D RRMNVA+TRAR+ +VCD+ T+ + FL RL+ + +HAE
Sbjct: 720 FLGDSRRMNVAITRARKHVAVVCDSSTICHNTFLARLLRHIRYIGRVKHAE 770
>gi|110637960|ref|YP_678167.1| DNA helicase [Cytophaga hutchinsonii ATCC 33406]
gi|110280641|gb|ABG58827.1| DNA helicase [Cytophaga hutchinsonii ATCC 33406]
Length = 611
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 197/519 (37%), Positives = 299/519 (57%), Gaps = 15/519 (2%)
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDAL-IQLSKGVQNGPAAGLIPVLFGEQKPTVLK 185
D+ P+ + + ++KL ++ +Y M L S + L V+ GE+ +
Sbjct: 99 DEAPDWLSDGKIGMDKLFDKHSYETMLSTLDYWASDDGLTKDSIRLRDVILGEKTASFNT 158
Query: 186 KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILA 245
K+ P LD +QK A KA+ +++V ++HGPPGTGKTTT+VEI+ +++G ++L
Sbjct: 159 KENYAAP--DKLDITQKKAWEKAIQAQDVAIIHGPPGTGKTTTIVEIVKTLIEKGERVLV 216
Query: 246 CAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK-- 303
CA+SN AVD + ERL + +VRLG+P+++ Q L+ LD QV+ + L +++K
Sbjct: 217 CASSNAAVDVLTERLAARGLPVVRLGNPSKITEQNLQYCLDRQVVNHEQFGLVKELKKRA 276
Query: 304 -EMKALNGKLLKTKDKNTRRE---IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
E + K + D+ R + I KE R L + +V+ VV T
Sbjct: 277 EEFFRMANKYKRNFDREEREQRKAILKEARNLRGQADDHLHFLQQNVLVKNQVVTCTPVV 336
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
++ R++ FD +I DE+ Q +E CWI + K + ILAGDHLQLPPTV+S EA KKGL
Sbjct: 337 SMHREIGKEKFDTLIFDESGQTMEPMCWIPIQKVKKVILAGDHLQLPPTVKSDEAAKKGL 396
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTL 479
+L E+L L G ++ ML +QYRM+E IM + S+ Y++K++AH S VK + + +
Sbjct: 397 AISLLEKLMPLPG--ISEMLAIQYRMNEKIMQFPSQWFYDNKLEAHGS-VKDHAFDDDVI 453
Query: 480 LLIDIAGCDMEEK-KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL 538
ID AG EE+ N+ EA++ +A + + AS IGII+PY Q+ +
Sbjct: 454 QFIDTAGTGYEEELVGAPFGIRNKQEADLVLAILNNVAELNKQAS-IGIISPYKLQIQYI 512
Query: 539 K-ILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
+ L + KN++V TVDGFQG+EK+ IIIS+VRSN K+E+GFL D RRMNVA+TRAR
Sbjct: 513 REQLIEQKITSKNIQVQTVDGFQGQEKDIIIISLVRSNGKQEIGFLKDLRRMNVAITRAR 572
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLN 636
++ ++ D+ T+SS F EY E H Y S EY++
Sbjct: 573 KKLIVIGDSSTLSSSKFYAGFQEYIESHNGYHSAWEYIS 611
>gi|409099302|ref|ZP_11219326.1| ATPase AAA [Pedobacter agri PB92]
Length = 637
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 213/648 (32%), Positives = 348/648 (53%), Gaps = 41/648 (6%)
Query: 16 QEFVSVMAPLIDLEKEAEISASI-----TSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
+E+ + L+ E++ ++ A + TS A R L G T + + + G
Sbjct: 3 KEYFKKLQELLITERDEDLQAYLKLTENTSAADRRL-----LGLTWYPIAIRNNEIGRGD 57
Query: 71 KTLLEFQ-STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF--D 127
+E + +T D+ +FG+ VVL N D L +G + + + ++F D
Sbjct: 58 YLTVELERTTHQDISHQFRFGS--SVVLFSNH-DAKQDRL-EGTITHQTGNKMKISFRVD 113
Query: 128 DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKD 187
++P+ + L ++ L + +Y M++AL Q S + P LI +L +KP+ ++
Sbjct: 114 ELPDWSRDGKLGVDLLFDNNSYDEMQNALKQASNLADHQPENKLISILTEGEKPSFQNEE 173
Query: 188 IAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSKILAC 246
F P + L+ SQ+ A+ K +++ ++ ++HGPPGTGKTTT+V I K KIL
Sbjct: 174 KFFIP--NKLNESQQQAVHKIVTANHLAIVHGPPGTGKTTTLVHAIKSLTKHYDQKILVV 231
Query: 247 AASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
A SN AVD + E+L + ++R+G+PAR+ ++L S L+ ++ + ++K+
Sbjct: 232 APSNTAVDLLTEKLAAEGLNVIRIGNPARVSDRLLASTLEHKMADHPDMKSVKSLKKQAN 291
Query: 307 ALNGKLLKTK------DKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA 360
K K +++ R+ + E + KE K +Q + ++ A ++ TL GA
Sbjct: 292 EFKNMAHKYKRSFGKAERDQRKALFDEAHKIGKEVEKTEQYIMDNLFSKAQIITATLVGA 351
Query: 361 VSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLG 420
+ N ++ V+IDEA QALE ACWI +LK + +LAGDH QL PT++S EA + GL
Sbjct: 352 NHYTVRNLKYNTVVIDEAGQALEPACWIPILKAEKVVLAGDHFQLSPTIKSSEAGRNGLS 411
Query: 421 RTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR--TSSTEPT 478
+TL E+ L+ + V +L QYRMHE IM +SS+ YNS++ AH + + + EP
Sbjct: 412 KTLLEKSVSLHPESVV-LLNEQYRMHESIMGYSSQVFYNSQLHAHHAVARHLVFADDEP- 469
Query: 479 LLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQ------SGVHASDIGIITPYA 532
L ID AGC +EK D ST N EA + H LIQ + V I I++PY
Sbjct: 470 LAFIDTAGCSFDEKLDGT-STTNPDEATFLVTHLSALIQELESKETIVDFPSIAIVSPYK 528
Query: 533 AQVVLLKILRSKDDKL----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
QV ++K+L +++ L + V+T+D FQG+E++ + IS+ RSN+ +GFL+D RR
Sbjct: 529 QQVQIVKMLVEENELLMAHQDKISVNTIDSFQGQERDVVYISLTRSNADGSIGFLADTRR 588
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLN 636
MNVA+TRAR++ ++ D+ T+S F I Y E+ Y S E++N
Sbjct: 589 MNVAMTRARKKLVVIGDSATLSKAKFYADFIIYAEKLNAYHSAWEFIN 636
>gi|212225034|ref|YP_002308270.1| DNA helicase [Thermococcus onnurineus NA1]
gi|212009991|gb|ACJ17373.1| DNA helicase [Thermococcus onnurineus NA1]
Length = 660
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 229/675 (33%), Positives = 357/675 (52%), Gaps = 84/675 (12%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
+ L++F++ + L++ E++AEI A + +K G IL L ++G+
Sbjct: 1 MELEKFINHLKVLVEYERKAEIEAMRAEMKRLSGREREKVGRAILGLNG-----KIIGEE 55
Query: 73 LLEFQSTKG-DVLPAHKFGTHDVVVLK---PNKADLGSPALGQGVVYRLKDSSITVAFDD 128
L F G D + G D+VV+ P K+DL + +G + ITVA +
Sbjct: 56 LGYFLVKYGRDREIKTEIGVGDLVVISKRDPLKSDLVGTVVEKGKRF------ITVALET 109
Query: 129 IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDI 188
+PE L +RL+ AN++T++R + L L +G + + G + P + +
Sbjct: 110 VPEWALKG-IRLDLYANDITFKRWIENLEHLHEGGKRA-----LEFYLGLRDPEE-SEPV 162
Query: 189 AFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAA 248
F P + +L+ SQ+ AIS+AL S N F++HGP GTGKT T+ E+I QEV+RG K+LA A
Sbjct: 163 EFDPIDKSLNASQRRAISQALGSPNFFLIHGPFGTGKTRTLAELIRQEVERGHKVLATAE 222
Query: 249 SNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKAL 308
SN+AVDN+VERL +++VR+GHP+R+ + E+ L + + D S ++R + L
Sbjct: 223 SNVAVDNLVERLAESGLKIVRIGHPSRVSKHLHETTLAYLMTKHDLYSELRELRVTAQNL 282
Query: 309 NGK---------------------LLKTKDKNTRREIQKELRTLSK-------------E 334
K L + + TR K +R ++ +
Sbjct: 283 AEKRDTFTKPLPKYRRGLTDIEILALSRRRRGTRGVPAKLIREMANWIKLNKLVQKAFDD 342
Query: 335 ERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGS 394
RK ++ ++I+ ADVVLTT A + +D+ IIDEA QA + I + +
Sbjct: 343 ARKLEERIAREIIQEADVVLTTNASAGLEVIGYADYDVAIIDEATQATIPSVLIPINRAK 402
Query: 395 RCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSS 454
R +LAGDH QLPPT+ S +A + L RTLFE L + Y ++ ++MLTVQYRM+E +M + +
Sbjct: 403 RFVLAGDHRQLPPTILSEKARE--LSRTLFEGLIERYPED-SAMLTVQYRMNERLMEFPN 459
Query: 455 KQLYNSKIKAHPS---------GVKRTSSTEP---------TLLLIDIAGC--DMEEKKD 494
++ Y+ KIKA P G+K + EP L+ ID + E ++
Sbjct: 460 REFYDGKIKAAPGVKCITLTDLGIKCPNFGEPWDEILKAGNVLVFIDTSKHPEKWERQRR 519
Query: 495 EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVS 554
+S N EA + ++L++ GV IG+ITPY Q L+ L ++ +EV
Sbjct: 520 GSESRENPLEARIVAETVEKLLEMGVKPEWIGVITPYDDQRDLISSLVPEE-----IEVR 574
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGF 614
TVDG+QGREKE II+S VRSN + EVGFL D RR+NV++TRA+R+ +V D+ET+S
Sbjct: 575 TVDGYQGREKEVIILSFVRSNERGEVGFLKDLRRLNVSLTRAKRKLIVVGDSETLSVHST 634
Query: 615 LKRLIEYFEEHAEYL 629
KR IE+ + ++
Sbjct: 635 YKRFIEFVKAEGRFV 649
>gi|225454589|ref|XP_002264216.1| PREDICTED: DNA-binding protein SMUBP-2 [Vitis vinifera]
Length = 953
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 248/711 (34%), Positives = 372/711 (52%), Gaps = 104/711 (14%)
Query: 1 MEGRKTKEKQSAVSLQEFVSVMAPLIDLEKEAEI-----------SASITSGASRNLD-- 47
ME K K QS + EF M+ L+ +E+++E+ + +S +S+ ++
Sbjct: 244 MELDKAKAIQSRI--DEFTKRMSELLQIERDSELEFTQEELNAVPTPDESSDSSKPIEFL 301
Query: 48 -----TAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLK-PNK 101
Q+ TI NL V GL G L+ F+ LP D+V ++ +
Sbjct: 302 VSHGQAQQELCDTICNLNAVSTFIGLGGMHLVLFKVEGNHRLPPTTLSPGDMVCVRICDS 361
Query: 102 ADLGSPALGQGVVYRL-KDS-SITVAFDDIPEEGLNSPL--------RLEKLANEVTYRR 151
G+ + QG V L KD SI+VA + + S L R+ LA+ +TY R
Sbjct: 362 RGAGATSCMQGFVDSLGKDGCSISVALESRHGDPTFSKLFGKSVRIDRIHGLADALTYER 421
Query: 152 MKDALIQLSK-GVQN-GPAAGLIPVLFGEQKPTVLKKDIAFKPFN--------------- 194
+AL+ L K G+Q P+ ++ LFG+ K+D+A+ N
Sbjct: 422 NCEALMLLQKNGLQKKNPSIAVVATLFGD------KEDVAWLEENDLVDWAEVGLDELLE 475
Query: 195 -SNLDHSQKDAISKALSSKN-VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIA 252
D SQ+ AI+ L+ K + ++ GPPGTGKT + E+I V++G ++L A +N A
Sbjct: 476 SGAYDDSQRRAIALGLNKKRPILIIQGPPGTGKTVLLKELIALAVQQGERVLVTAPTNAA 535
Query: 253 VDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSL----------ASDIR 302
VDN+VE+L V +VR+G+PAR+ V +L V NS L SD+R
Sbjct: 536 VDNMVEKLSNIGVNIVRVGNPARISSAVASKSLGEIV----NSKLENFLTEFERKKSDLR 591
Query: 303 KEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA-- 360
K+++ KD + I++ L+ L K +K+++ V +V+ +A VVL T TGA
Sbjct: 592 KDLRHC------LKDDSLAAGIRQLLKQLGKALKKKEKETVKEVLSSAQVVLATNTGAAD 645
Query: 361 -VSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
V R+LD +FDLVIIDEA QA+E +CWI +L+G RCI+AGD QL P + S +A + GL
Sbjct: 646 PVIRRLD--AFDLVIIDEAGQAIEPSCWIPILQGKRCIIAGDQCQLAPVILSRKALEGGL 703
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNS----------KIKAHPSGV 469
G +L ER A L+ + + + LT QYRM++ I +W+SK++Y + V
Sbjct: 704 GVSLLERAATLHEEVLATKLTTQYRMNDAIASWASKEMYGGSLKSSSSVFSHLLVDSPFV 763
Query: 470 KRTSSTEPTLLLIDI--------AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVH 521
K T+ LLL+D GC+ S NEGEA++ + H LI +GV
Sbjct: 764 KPAWITQCPLLLLDTRMPYGSLSVGCEEHLDPAGTGSFYNEGEADIVVQHVLSLISAGVS 823
Query: 522 ASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVG 581
+ I + +PY AQV LL+ + + +EV+T+D FQGRE +A+IISMVRSN+ VG
Sbjct: 824 PTAIAVQSPYVAQVQLLRDRLDEIPEAVGVEVATIDSFQGREADAVIISMVRSNTLGAVG 883
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFE-----EHAE 627
FL D RRMNVA+TRAR+ +VCD+ T+ + FL RL+ + +HAE
Sbjct: 884 FLGDSRRMNVAITRARKHVAVVCDSSTICHNTFLARLLRHIRYIGRVKHAE 934
>gi|387790987|ref|YP_006256052.1| ATPase [Solitalea canadensis DSM 3403]
gi|379653820|gb|AFD06876.1| Putative ATPase (DUF699) [Solitalea canadensis DSM 3403]
Length = 642
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 208/611 (34%), Positives = 322/611 (52%), Gaps = 40/611 (6%)
Query: 51 KKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALG 110
K GS+ +K G + +E + T H+ T L N + S
Sbjct: 39 KNGSSWYPVKITQTGYGRGEQVFVELERTNSKN-SDHQLQTGKRASLFCNTNNQASKLRV 97
Query: 111 QGVV-YRLKDS-SITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPA 168
+GV+ LKD + + D++PE + + ++ L +E +Y+ M D L ++ QN
Sbjct: 98 EGVIGTALKDRLRLYLNADELPEWINDGKIGIDLLFDETSYKEMDDTL-RIVAEAQNNRL 156
Query: 169 AGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTT 228
A L +L G P D + + L+ SQ A+ L++ +V ++HGPPGTGKTTT
Sbjct: 157 AELREILLG-HSPASFSADF-YTSESQQLNTSQNSAVHNILNANDVAIVHGPPGTGKTTT 214
Query: 229 VVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQ 288
VE I Q + ++L A SN AVD + ERL + +VR+GHPAR+ + + +D +
Sbjct: 215 FVEAIKQVTLKEKQVLVTAPSNTAVDLLCERLSAQGLNVVRIGHPARVGDHLADLVIDNK 274
Query: 289 VLRGDNSSLASDIRKEMKALNGKLLKTK------DKNTRREIQKELRTLSKEERKRQQLA 342
+ + + + IRK+ + K K + R+ + E R+L +E K +
Sbjct: 275 ISQHEYFNDIKSIRKKAEEFRNMAFKYKRNFGKEESRQRQLLFNEARSLKQEAIKLEDYI 334
Query: 343 VTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDH 402
V+D++ A V+ TL G+ + L + F V IDEAAQALE ACWI ++K R I+AGDH
Sbjct: 335 VSDILSEAQVIACTLVGSNNSVLRDRQFKTVFIDEAAQALEPACWIPIMKAQRVIMAGDH 394
Query: 403 LQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKI 462
QLPPTV+S EA K+GL TLFE++ + +V ++L VQYRM++ IM +S++Q Y K+
Sbjct: 395 CQLPPTVKSYEAGKQGLNVTLFEKVIE--RQKVDTLLEVQYRMNKAIMEFSNQQFYRGKL 452
Query: 463 KAHPSGVKR--TSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGV 520
A + R E LL ID AGC E+ + S N E + M + +Q
Sbjct: 453 TAFETVANRKLVKEDENPLLFIDTAGCGFNERTENGRSASNPEEGNLLMNYLNDYLQQLT 512
Query: 521 HASD--------IGIITPYAAQVVLLKILRSKDDKLKNME----------VSTVDGFQGR 562
+ + +G+I+PY AQV L ++L+N E +TVDGFQG+
Sbjct: 513 NYDNEVMDKIRRVGVISPYKAQVSFLT------EQLENFETLASLGKKISFNTVDGFQGQ 566
Query: 563 EKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
E + I IS+VRSN K E+GFL+D RRMNVA+TRA+++ ++ D+ T+SS F +++
Sbjct: 567 ECDLIAISLVRSNEKNEIGFLADTRRMNVAITRAKKKLLIIGDSATLSSHPFYASFLDHV 626
Query: 623 EEHAEYLSGSE 633
+ ++ Y S E
Sbjct: 627 QNNSAYQSAWE 637
>gi|15642780|ref|NP_227821.1| DNA helicase [Thermotoga maritima MSB8]
gi|4980488|gb|AAD35099.1|AE001689_5 DNA helicase, putative [Thermotoga maritima MSB8]
Length = 650
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 237/682 (34%), Positives = 367/682 (53%), Gaps = 99/682 (14%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNL--KCVDAQTGLMG 70
+++Q+F+ + L++LE+ AEI+A + + + +KKG +L L K + + G
Sbjct: 1 MTVQQFIKKLVRLVELERNAEINAMLDEMKRLSGEEREKKGRAVLGLTGKFIGEELGYF- 59
Query: 71 KTLLEF-QSTKGDVLPAHKFGTHDVVVL---KPNKADLGSPALGQGVVYRLKDSSITVAF 126
L+ F + K D + G D+V++ P K+D + +G + ITVA
Sbjct: 60 --LVRFGRRKKIDT----EIGVGDLVLISKGNPLKSDYTGTVVEKG------ERFITVAV 107
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
D +P L + +R++ A+++T+RR + L+ LS G A + L G++KP +
Sbjct: 108 DRLPSWKLKN-VRIDLFASDITFRRQIENLMTLS---SEGKKA--LEFLLGKRKPEESFE 161
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILAC 246
+ F PF+ L+ SQ++A+S AL S + F++HGP GTGKT T+VE I QEV RG KIL
Sbjct: 162 E-EFTPFDEGLNESQREAVSLALGSSDFFLIHGPFGTGKTRTLVEYIRQEVARGKKILVT 220
Query: 247 AASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
A SN+AVDN+VERL +V LVR+GHP+R+ + ES L Q+ + SS ++K MK
Sbjct: 221 AESNLAVDNLVERLW-GKVSLVRIGHPSRVSSHLKESTLAHQI---ETSSEYEKVKK-MK 275
Query: 307 ALNGKLLKTKDKNT------RR-----------EIQKELRTLSKEE-------------- 335
KL+K +D T RR E R +SKE+
Sbjct: 276 EELAKLIKKRDSFTKPSPQWRRGLSDKKILEYAEKNWSARGVSKEKIKEMAEWIKLNSQI 335
Query: 336 -------RKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWI 388
+++++ + +++ A VVL+T + A L FD+V++DEA+QA + I
Sbjct: 336 QDIRDLIERKEEIIASRIVREAQVVLSTNSSAALEILSGIVFDVVVVDEASQATIPSILI 395
Query: 389 ALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEH 448
+ KG + +LAGDH QLPPT+ S +A K L RTLFE L Y E +S+L QYRM+E
Sbjct: 396 PISKGKKFVLAGDHKQLPPTILSEDA--KDLSRTLFEELITRY-PEKSSLLDTQYRMNEL 452
Query: 449 IMNWSSKQLYNSKIKAHPS---------GVKRTS---------STEPTLLLIDIAGCD-- 488
+M + S++ Y+ K+KA GV+ + S + L+ ID
Sbjct: 453 LMEFPSEEFYDGKLKAAEKVRNITLFDLGVEIPNFGKFWDVVLSPKNVLVFIDTKNRSDR 512
Query: 489 MEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK-ILRSKDDK 547
E ++ + S N EA++ ++L+ GV IGIITPY QV L++ ++ +K
Sbjct: 513 FERQRKDSPSRENPLEAQIVKEVVEKLLSMGVKEDWIGIITPYDDQVNLIRELIEAK--- 569
Query: 548 LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTE 607
+EV +VDGFQGREKE IIIS VRSN E+GFL D RR+NV++TRA+R+ D+
Sbjct: 570 ---VEVHSVDGFQGREKEVIIISFVRSNKNGEIGFLEDLRRLNVSLTRAKRKLIATGDSS 626
Query: 608 TVSSDGFLKRLIEYFEEHAEYL 629
T+S +R +E+ ++ Y+
Sbjct: 627 TLSVHPTYRRFVEFVKKKGTYV 648
>gi|124009432|ref|ZP_01694109.1| dna-binding protein smubp-2 [Microscilla marina ATCC 23134]
gi|123984980|gb|EAY24938.1| dna-binding protein smubp-2 [Microscilla marina ATCC 23134]
Length = 649
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 214/657 (32%), Positives = 349/657 (53%), Gaps = 45/657 (6%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
+Q F ++ L+++EKE + L +KKG + + + G +
Sbjct: 1 MQHFDKLLE-LLNIEKEEDQRQYQNQMVLTPLSERKKKGVSWYPVTVKSTEIGTGENYYI 59
Query: 75 EFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF--DDIPEE 132
F+ ++ H F D+V L N + G + GV+ +K ++ VAF D++PE
Sbjct: 60 SFERVT-ELRQNHSFQVGDMVSLFNNSSKQGKKSSISGVITYVKRDAMRVAFSVDELPEW 118
Query: 133 GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKP 192
L ++ L + VTY+ M DA ++ ++ L VL G++K L K
Sbjct: 119 VEYGTLGIDLLFDAVTYKEM-DAAVRKVVSSEDPRVIELRDVLIGKKKARFLDKSELPDY 177
Query: 193 FN-SNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNI 251
+ + L+ SQ +A+ L +++V ++HGPPGTGKTTT+V + +++ ++L A SN
Sbjct: 178 YEVATLNESQNEAVQNILRAQDVAIIHGPPGTGKTTTMVAAVKLTLQQEKQVLVTAPSNT 237
Query: 252 AVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR------KEM 305
AVD + +RL+ V ++R+G+PAR+ ++ +L++Q+ + + L IR K+M
Sbjct: 238 AVDLLTKRLLAKGVSVIRVGNPARVNEDLIPFSLESQIAQHPDYKLLKKIRRDADEYKKM 297
Query: 306 KALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKL 365
A + +++ R+ + E L E ++ V ++ N VV TL G+V++ +
Sbjct: 298 AAKYKRNFGKEEREQRKLMFAEASKLKHEAYALEKYIVDSLLNNTQVVTATLVGSVNKFI 357
Query: 366 DNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFE 425
F V IDEA QALE ACWI LLK R + AGDH QLPPT++S +A K GL TLFE
Sbjct: 358 RYRRFSTVFIDEAGQALEPACWIPLLKSERVVFAGDHCQLPPTIKSFDAAKGGLTETLFE 417
Query: 426 RLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLY-----------NSKIKAHPSGVKRTSS 474
++ + V ML QYRMHEHIM +S+K+ Y N ++ AH + ++
Sbjct: 418 QV--IKKQAVDVMLKTQYRMHEHIMQFSNKEFYQGELLAADTVVNHRLFAH-ADLQGEMI 474
Query: 475 TEPTLLLIDIAGCDMEEKK-DEEDSTMNEGEAEVAMAHAKRL-----------IQSGVHA 522
+P + ID AGC EEK E S N EA + + H +L ++ G +
Sbjct: 475 NQP-VEFIDTAGCGFEEKTMAETGSKYNPDEAGILLKHWIQLATQLQLAEPDMLKEGWFS 533
Query: 523 SDIGIITPYAAQVVLLKILRSKDDKLKNM----EVSTVDGFQGREKEAIIISMVRSNSKK 578
+ GII+PY AQV LK L ++ L + +++++DGFQG+E++ + ISMVRSN K
Sbjct: 534 A--GIISPYQAQVKHLKELFAEHPDLTEVAPWTDINSIDGFQGQERDVVYISMVRSNDKG 591
Query: 579 EVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
++GFL D RRMNVA+TRAR++ ++ D+ T+ + F + ++Y + Y S E++
Sbjct: 592 KIGFLEDTRRMNVALTRARKKLVVIGDSGTLGQNAFYQHFLDYIDSIGAYRSAWEWM 648
>gi|319789787|ref|YP_004151420.1| DNA helicase [Thermovibrio ammonificans HB-1]
gi|317114289|gb|ADU96779.1| DNA helicase [Thermovibrio ammonificans HB-1]
Length = 720
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 223/628 (35%), Positives = 349/628 (55%), Gaps = 82/628 (13%)
Query: 68 LMGKTLLEFQSTK-GDVLPAH------------KFGTHDVVVL---KPNKADLGSPALGQ 111
L+G+ +L+ + TK G H + T D+V++ P K+DL
Sbjct: 103 LLGRAILDLKGTKAGTKFHLHLVRFWREKPIETEITTGDIVLVSKGNPLKSDL------L 156
Query: 112 GVVYRLKDSSITVAFDDIPEEGL-NSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAG 170
G V R+ + ++TVAFD+ P + +R++ N+VT++RM++ L +L +G
Sbjct: 157 GTVVRITEKTVTVAFDNRPPNWVYKRGVRIDLYVNDVTFKRMEENLEELRHA--SGRQRE 214
Query: 171 LIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVV 230
L + G ++P +I F+P +S L+ +Q+ A+S+AL S + F++HGPPGTGKT+T+
Sbjct: 215 LRNTVIGLREPEHFT-EIPFEPVDSRLNETQRLAVSRALGSPDFFLIHGPPGTGKTSTIT 273
Query: 231 EIILQEVKRGSKILACAASNIAVDNIVERLVPH-RVRLVRLGHPARLLPQV--------L 281
E+I+Q VKRG K++A A SNIA DNI+ L + ++LVR+GHPAR+L ++
Sbjct: 274 ELIVQLVKRGEKVIATADSNIAADNILLNLSKYPDLKLVRIGHPARVLEELERFSIYALF 333
Query: 282 ESALDAQVL-------------RGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKEL 328
E AQ + R + +R+ M K K+ R +K +
Sbjct: 334 EEHPKAQKVKEGWERVKELIEKRDQFTKPVPQLRRGMSDDEIVYFGKKGKSFRGVPKKLM 393
Query: 329 RTLS-------------KEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVII 375
R+++ K ++ + ++I +ADVV++T + S L+ FD +I
Sbjct: 394 RSMAEWILANYEIDVRIKALKEMETHIFREIIADADVVISTNSMVKSELLEGFHFDSAVI 453
Query: 376 DEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEV 435
DE +Q +E + I + + +R +AGDH QLPPTV S EA K L RTLFERL +G E+
Sbjct: 454 DEGSQQVEPSTLIPIARANRFFIAGDHKQLPPTVASEEA--KELERTLFERLISTHG-EL 510
Query: 436 TSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS-------------TEPTLLL- 481
+SML VQYRM+E IM + +++ Y K+ A P +RT + +P++ L
Sbjct: 511 SSMLRVQYRMNEKIMEFPNREFYEGKLVAAPEVKERTLADFNLEAPRKFKKVLDPSVPLG 570
Query: 482 -IDIAGCDMEEKKDEEDSTM-NEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK 539
ID + + E + E ++ N EA++A+ A L + G+ +IGIITPYAAQV L+K
Sbjct: 571 FIDTSSINAYEFQPEGSTSYENYEEAKIAVEVALELHRMGLDRREIGIITPYAAQVKLIK 630
Query: 540 ILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 599
L ++ + +EV++VDGFQGREKEAII+S VRSN + E+GFL D RR+NVA+TR RR+
Sbjct: 631 QLLAEREF--KVEVNSVDGFQGREKEAIIVSFVRSNDEGEIGFLKDLRRLNVAITRPRRK 688
Query: 600 CCLVCDTETVSSDGFLKRLIEYFEEHAE 627
+ +T+T+SS R IE+ + E
Sbjct: 689 LVAIGNTKTLSSHSTYSRFIEHVKREGE 716
>gi|190409806|gb|EDV13071.1| DNA helicase A [Saccharomyces cerevisiae RM11-1a]
gi|207343464|gb|EDZ70918.1| YKL017Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259147817|emb|CAY81067.1| Hcs1p [Saccharomyces cerevisiae EC1118]
gi|323332808|gb|EGA74213.1| Hcs1p [Saccharomyces cerevisiae AWRI796]
Length = 683
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 240/695 (34%), Positives = 375/695 (53%), Gaps = 89/695 (12%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLE 75
+E S I E+E +I + + ++ + G I N+ + ++GL+GK +E
Sbjct: 3 KELASKFLSSIKHEREQDIQTTSRLLTTLSIQQLVQNGLAINNIHLENIRSGLIGKLYME 62
Query: 76 F--------QSTKGDVLPAHKFGTHDVVVLKPNKADL----------------GSPALGQ 111
+ +GD+ K G D+V+++P K + G A
Sbjct: 63 LGPNLAVNDKIQRGDI----KVG--DIVLVRPAKTKVNTKTKPKVKKVSEDSNGEQAECS 116
Query: 112 GVVYRLKDSSITVAFD---DIPEEGLNS--PLRLEKLANEVTYRRMKDALIQLSKGVQNG 166
GVVY++ D+ IT+A + D+ S L + K N VTY RM+ + +LS+ +
Sbjct: 117 GVVYKMSDTQITIALEESQDVIATTFYSYSKLYILKTTNVVTYNRMESTMRKLSEI--SS 174
Query: 167 PAAGLIPVLFGEQKPTVLKKDIAF---KPF-NSNLDHSQKDAISKALSSKNVFMLHGPPG 222
P I ++P + + +F K F N NL+ SQK AI+ A+++ ++ ++HGPPG
Sbjct: 175 PIQDKIIQYLVNERPFIPNTN-SFQNIKSFLNPNLNDSQKTAINFAINN-DLTIIHGPPG 232
Query: 223 TGKTTTVVEIILQEVKRG--SKILACAASNIAVDNIVERL---VPHRVRLVRLGHPARLL 277
TGKT T++E+I Q + + +IL C SNI+VD I+ERL VP+ + L+R+GHPARLL
Sbjct: 233 TGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNL-LLRIGHPARLL 291
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERK 337
+LD +L N+ + DI +E+ L + K K+ R+E E++ L K+ +K
Sbjct: 292 DSNKRHSLD--ILSKKNT-IVKDISQEIDKLIQENKKLKNYKQRKENWNEIKLLRKDLKK 348
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVSRKL-----DNTSF---DLVIIDEAAQALEIACWIA 389
R+ + D+I + +V+TTL G+ SR+L D+ +F D +IIDE +QA+E CWI
Sbjct: 349 REFKTIKDLIIQSRIVVTTLHGSSSRELCSLYRDDPNFQLFDTLIIDEVSQAMEPQCWIP 408
Query: 390 LL----KGSRCILAGDHLQLPPTVQSVEAEK--KGLGRTLFERLADLYGD-EVTSMLTVQ 442
L+ + + +LAGD+ QLPPT+++ + + L TLF+R+ ++ ++ L VQ
Sbjct: 409 LIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDRIIKIFPKRDMVKFLNVQ 468
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT---------------LLLIDIAGC 487
YRM++ IM + S +YN K+ A + R PT L+ D G
Sbjct: 469 YRMNQKIMEFPSHSMYNGKLLADATVANRLLIDLPTVDATPSEDDDDTKIPLIWYDTQGD 528
Query: 488 DMEEKKDEED---STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSK 544
+ +E DE S NEGE + H + L V + IG+I+PY AQV LK L
Sbjct: 529 EFQETADEATILGSKYNEGEIAIVKEHIENLRSFNVPENSIGVISPYNAQVSHLKKLIHD 588
Query: 545 DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
+ KL ++E+STVDGFQGREK+ II+S+VRSN K EVGFL + RR+NVA+TR RRQ +V
Sbjct: 589 ELKLTDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKEERRLNVAITRPRRQLVVVG 648
Query: 605 DTETVSSDG--FLKRLIEYFEEHAE--YLSGSEYL 635
+ E + G +LK E+ EE+A+ Y + +YL
Sbjct: 649 NIEVLQRCGNKYLKSWSEWCEENADVRYPNIDDYL 683
>gi|57640113|ref|YP_182591.1| UvrD/REP family DNA helicase [Thermococcus kodakarensis KOD1]
gi|57158437|dbj|BAD84367.1| DNA helicase, UvrD/REP family [Thermococcus kodakarensis KOD1]
Length = 661
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 232/682 (34%), Positives = 367/682 (53%), Gaps = 92/682 (13%)
Query: 10 QSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLM 69
+ V L +F++ + L+++E+ AEI A + +K G +L L ++
Sbjct: 3 EKEVLLSKFIAHLKELVEMERRAEIEAMRLEMRRLSGREREKVGRAVLGLNG-----KVI 57
Query: 70 GKTLLEFQSTKG-DVLPAHKFGTHDVVVLK---PNKADLGSPALGQGVVYRLKDSSITVA 125
G+ L F G D + D+VV+ P K+DL + +G + +TVA
Sbjct: 58 GEELGYFLVRYGRDREIKTEISVGDLVVISKRDPLKSDLVGTVVEKGKRF------LTVA 111
Query: 126 FDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK 185
+ +PE L +R++ AN++T++R + L L ++G A + + G ++P
Sbjct: 112 IETVPEWALKG-VRIDLYANDITFKRWMENLDNLR---ESGRKA--LELYLGLREPEE-S 164
Query: 186 KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILA 245
+ + F+PF+ +L+ SQ+ AI+KAL S + F++HGP GTGKT T+VE+I QEV RG K+LA
Sbjct: 165 EPVEFQPFDKSLNASQRGAIAKALGSGDFFLVHGPFGTGKTRTLVELIRQEVARGHKVLA 224
Query: 246 CAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEM 305
A SN+AVDNIVERL +++VR+GHP+R+ + E+ L + + D L +++R E+
Sbjct: 225 TAESNVAVDNIVERLADSGLKVVRIGHPSRVSKALHETTLAYLITQHD---LYAELR-EL 280
Query: 306 KALNGKLLKTKDKNTR-----------REI--------------QKELRTLSKEERKRQQ 340
+ + L + +D T+ REI + +R +++ R QQ
Sbjct: 281 RVIGENLKEKRDTFTKPAPKYRRGLSDREILRLAEKGIGTRGVPARLIREMAEWIRINQQ 340
Query: 341 LAVT-------------DVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACW 387
+ T ++I+ ADVVLTT A +D +D+ +IDEA QA +
Sbjct: 341 VQKTFDDARKLEERIAREIIQEADVVLTTNASAGLEVVDYGEYDVAVIDEATQATIPSVL 400
Query: 388 IALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHE 447
I + + R +LAGDH QLPPT+ S +A K L +TLFE L + Y E + MLTVQYRM+E
Sbjct: 401 IPINRAKRFVLAGDHKQLPPTILSEKA--KELSKTLFEGLIERY-PEKSEMLTVQYRMNE 457
Query: 448 HIMNWSSKQLYNSKIKAHPS---------GVKRTS---------STEPTLLLIDIAGCD- 488
+M + S++ Y+ KIKAH S GV E L+ ID + +
Sbjct: 458 RLMEFPSREFYDGKIKAHESVKNITLADLGVSEPEFGNFWDEALKPENVLVFIDTSKRED 517
Query: 489 -MEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDK 547
E ++ DS N EA++ ++L++ GV IG+ITPY Q L+ + +D
Sbjct: 518 RFERQRRGSDSRENPLEAKLVTETVEKLLEMGVKPDWIGVITPYDDQRDLISSMVGED-- 575
Query: 548 LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTE 607
+EV TVDG+QGREKE I++S VRSN + E+GFL+D RR+NV++TRA+R+ V D+
Sbjct: 576 ---IEVKTVDGYQGREKEIIVLSFVRSNRRGELGFLTDLRRLNVSLTRAKRKLIAVGDSS 632
Query: 608 TVSSDGFLKRLIEYFEEHAEYL 629
T+S+ +R IE+ E ++
Sbjct: 633 TLSNHPTYRRFIEFVRERGTFI 654
>gi|6322835|ref|NP_012908.1| Hcs1p [Saccharomyces cerevisiae S288c]
gi|465704|sp|P34243.1|HCS1_YEAST RecName: Full=DNA polymerase alpha-associated DNA helicase A
gi|395256|emb|CAA52266.1| unnamed protein product [Saccharomyces cerevisiae]
gi|486007|emb|CAA81852.1| DIP1 [Saccharomyces cerevisiae]
gi|151941528|gb|EDN59891.1| DNA helicase A [Saccharomyces cerevisiae YJM789]
gi|285813242|tpg|DAA09139.1| TPA: Hcs1p [Saccharomyces cerevisiae S288c]
gi|392298121|gb|EIW09219.1| Hcs1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 683
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 240/695 (34%), Positives = 375/695 (53%), Gaps = 89/695 (12%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLE 75
+E S I E+E +I + + ++ + G I N+ + ++GL+GK +E
Sbjct: 3 KELASKFLSSIKHEREQDIQTTSRLLTTLSIQQLVQNGLAINNIHLENIRSGLIGKLYME 62
Query: 76 F--------QSTKGDVLPAHKFGTHDVVVLKPNKADL----------------GSPALGQ 111
+ +GD+ K G D+V+++P K + G A
Sbjct: 63 LGPNLAVNDKIQRGDI----KVG--DIVLVRPAKTKVNTKTKPKVKKVSEDSNGEQAECS 116
Query: 112 GVVYRLKDSSITVAFD---DIPEEGLNS--PLRLEKLANEVTYRRMKDALIQLSKGVQNG 166
GVVY++ D+ IT+A + D+ S L + K N VTY RM+ + +LS+ +
Sbjct: 117 GVVYKMSDTQITIALEESQDVIATTFYSYSKLYILKTTNVVTYNRMESTMRKLSEI--SS 174
Query: 167 PAAGLIPVLFGEQKPTVLKKDIAF---KPF-NSNLDHSQKDAISKALSSKNVFMLHGPPG 222
P I ++P + + +F K F N NL+ SQK AI+ A+++ ++ ++HGPPG
Sbjct: 175 PIQDKIIQYLVNERPFIPNTN-SFQNIKSFLNPNLNDSQKTAINFAINN-DLTIIHGPPG 232
Query: 223 TGKTTTVVEIILQEVKRG--SKILACAASNIAVDNIVERL---VPHRVRLVRLGHPARLL 277
TGKT T++E+I Q + + +IL C SNI+VD I+ERL VP+ + L+R+GHPARLL
Sbjct: 233 TGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNL-LLRIGHPARLL 291
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERK 337
+LD +L N+ + DI +E+ L + K K+ R+E E++ L K+ +K
Sbjct: 292 DSNKRHSLD--ILSKKNT-IVKDISQEIDKLIQENKKLKNYKQRKENWNEIKLLRKDLKK 348
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVSRKL-----DNTSF---DLVIIDEAAQALEIACWIA 389
R+ + D+I + +V+TTL G+ SR+L D+ +F D +IIDE +QA+E CWI
Sbjct: 349 REFKTIKDLIIQSRIVVTTLHGSSSRELCSLYRDDPNFQLFDTLIIDEVSQAMEPQCWIP 408
Query: 390 LL----KGSRCILAGDHLQLPPTVQSVEAEK--KGLGRTLFERLADLYGD-EVTSMLTVQ 442
L+ + + +LAGD+ QLPPT+++ + + L TLF+R+ ++ ++ L VQ
Sbjct: 409 LIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDRIIKIFPKRDMVKFLNVQ 468
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT---------------LLLIDIAGC 487
YRM++ IM + S +YN K+ A + R PT L+ D G
Sbjct: 469 YRMNQKIMEFPSHSMYNGKLLADATVANRLLIDLPTVDATPSEDDDDTKIPLIWYDTQGD 528
Query: 488 DMEEKKDEED---STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSK 544
+ +E DE S NEGE + H + L V + IG+I+PY AQV LK L
Sbjct: 529 EFQETADEATILGSKYNEGEIAIVKEHIENLRSFNVPENSIGVISPYNAQVSHLKKLIHD 588
Query: 545 DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
+ KL ++E+STVDGFQGREK+ II+S+VRSN K EVGFL + RR+NVA+TR RRQ +V
Sbjct: 589 ELKLTDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKEERRLNVAMTRPRRQLVVVG 648
Query: 605 DTETVSSDG--FLKRLIEYFEEHAE--YLSGSEYL 635
+ E + G +LK E+ EE+A+ Y + +YL
Sbjct: 649 NIEVLQRCGNKYLKSWSEWCEENADVRYPNIDDYL 683
>gi|323336740|gb|EGA78004.1| Hcs1p [Saccharomyces cerevisiae Vin13]
Length = 683
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 239/695 (34%), Positives = 372/695 (53%), Gaps = 89/695 (12%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLE 75
+E S I E+E +I + + ++ + G I N+ + ++GL+GK +E
Sbjct: 3 KELASKFLSSIKHEREQDIQTTSRLLTTLSIQQLVQNGLAINNIHLENIRSGLIGKLYME 62
Query: 76 F--------QSTKGDVLPAHKFGTHDVVVLKPNKADL----------------GSPALGQ 111
+ +GD+ K G D+V+++P K + G A
Sbjct: 63 LGPNLAVNDKIQRGDI----KVG--DIVLVRPAKTKVNTKTKPKVKKVSEDSNGEQAECS 116
Query: 112 GVVYRLKDSSITVAFD---DIPEEGLNS--PLRLEKLANEVTYRRMKDALIQLSKGVQNG 166
GVVY++ D+ IT+A + D+ S L + K N VTY RM+ + +LS+ +
Sbjct: 117 GVVYKMSDTQITIALEESQDVIATTFYSYSKLYILKTTNVVTYNRMESTMRKLSEI--SS 174
Query: 167 PAAGLIPVLFGEQKPTVLKKDIAF---KPF-NSNLDHSQKDAISKALSSKNVFMLHGPPG 222
P I ++P + + +F K F N NL+ SQK AI+ A+++ ++ ++HGPPG
Sbjct: 175 PIQDKIIQYLVNERPFIPNTN-SFQNIKSFLNPNLNDSQKTAINFAINN-DLTIIHGPPG 232
Query: 223 TGKTTTVVEIILQEVKRG--SKILACAASNIAVDNIVERL---VPHRVRLVRLGHPARLL 277
TGKT T++E+I Q + + +IL C SNI+VD I+ERL VP+ + L+R+GHPARLL
Sbjct: 233 TGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNL-LLRIGHPARLL 291
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERK 337
+LD +L N+ + DI +E+ L + K K+ R+E E++ L K+ +K
Sbjct: 292 DSNKRHSLD--ILSKKNT-IVKDISQEIDKLIQENKKLKNYKQRKENWNEIKLLRKDLKK 348
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS--------FDLVIIDEAAQALEIACWIA 389
R+ + D+I + +V+TTL G+ SR+L + FD +IIDE +QA+E CWI
Sbjct: 349 REFKTIKDLIIQSRIVVTTLHGSSSRELXSLYRDDPNFQLFDTLIIDEVSQAMEPQCWIP 408
Query: 390 LL----KGSRCILAGDHLQLPPTVQSVEAEK--KGLGRTLFERLADLYGD-EVTSMLTVQ 442
L+ + + +LAGD+ QLPPT+++ + + L TLF+R+ ++ ++ L VQ
Sbjct: 409 LIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDRIIKIFPKRDMVKFLNVQ 468
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT---------------LLLIDIAGC 487
YRM++ IM + S +YN K+ A + R PT L+ D G
Sbjct: 469 YRMNQKIMEFPSHSMYNGKLLADATVANRLLIDLPTVDATPSEDDDDTKIPLIWYDTQGD 528
Query: 488 DMEEKKDEED---STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSK 544
+ +E DE S NEGE + H + L V + IG+I+PY AQV LK L
Sbjct: 529 EFQETADEATILGSKYNEGEIAIVKEHIENLRSFNVPENSIGVISPYNAQVSHLKKLIHD 588
Query: 545 DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
+ KL ++E+STVDGFQGREK+ II+S+VRSN K EVGFL + RR+NVA TR RRQ +V
Sbjct: 589 ELKLTDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKEERRLNVAXTRPRRQLVVVG 648
Query: 605 DTETVSSDG--FLKRLIEYFEEHAE--YLSGSEYL 635
+ E + G +LK E+ EE+A+ Y + +YL
Sbjct: 649 NIEVLQRCGNKYLKSWSEWCEENADVRYPNIDDYL 683
>gi|256271560|gb|EEU06603.1| Hcs1p [Saccharomyces cerevisiae JAY291]
Length = 683
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 242/696 (34%), Positives = 376/696 (54%), Gaps = 91/696 (13%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLE 75
+E S I E+E +I + + ++ + G I N+ + ++GL+GK +E
Sbjct: 3 KELASKFLSSIKHEREQDIQTTSRLLTTLSIQQLVQNGLAINNIHLENIRSGLIGKLYME 62
Query: 76 F--------QSTKGDVLPAHKFGTHDVVVLKPNKADL----------------GSPALGQ 111
+ +GD+ K G D+V+++P K + G A
Sbjct: 63 LGPNLAVNDKIQRGDI----KVG--DIVLVRPAKTKVNTKTKPKVKKVSEDSNGEQAECS 116
Query: 112 GVVYRLKDSSITVAFD---DIPEEGLNS--PLRLEKLANEVTYRRMKDALIQLSKGVQNG 166
GVVY++ D+ IT+A + D+ S L + K N VTY RM+ + +LS+ +
Sbjct: 117 GVVYKMSDTQITIALEESQDVIATTFYSYSKLYILKTINVVTYNRMESTMRKLSEI--SS 174
Query: 167 PAAGLIPVLFGEQKPTVLKKDIAF---KPF-NSNLDHSQKDAISKALSSKNVFMLHGPPG 222
P I ++P + + +F K F N NL+ SQK AI+ A+++ ++ ++HGPPG
Sbjct: 175 PIQDKIIQYLVNERPFIPNTN-SFQNIKSFLNPNLNDSQKTAINFAINN-DLTIIHGPPG 232
Query: 223 TGKTTTVVEIILQEVKRG--SKILACAASNIAVDNIVERL---VPHRVRLVRLGHPARLL 277
TGKT T++E+I Q + + +IL C SNI+VD I+ERL VP+ + L+R+GHPARLL
Sbjct: 233 TGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNL-LLRIGHPARLL 291
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERK 337
+LD +L N+ + DI +E+ L + K K+ R+E E++ L K+ +K
Sbjct: 292 DSNKRHSLD--ILSKKNT-IVKDISQEIDKLIQENKKLKNYKQRKENWNEIKLLRKDLKK 348
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVSRKL-----DNTSF---DLVIIDEAAQALEIACWIA 389
R+ + D+I + +V+TTL G+ SR+L D+ +F D +IIDE +QA+E CWI
Sbjct: 349 REFKTIKDLIIQSRIVVTTLHGSSSRELCSLYRDDPNFQLFDTLIIDEVSQAMEPQCWIP 408
Query: 390 LL----KGSRCILAGDHLQLPPTVQSVEAEKK---GLGRTLFERLADLYGD-EVTSMLTV 441
L+ + + +LAGD+ QLPPT+++ E +K L TLF+R+ ++ ++ L V
Sbjct: 409 LIAHQNQFHKLVLAGDNKQLPPTIKT-EDDKNVIHNLETTLFDRIIKIFPKRDMVKFLNV 467
Query: 442 QYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT---------------LLLIDIAG 486
QYRM++ IM + S +YN K+ A + R PT L+ D G
Sbjct: 468 QYRMNQKIMEFPSHSMYNGKLLADATVANRLLIDLPTVDATPSEDDDDTKIPLIWYDTQG 527
Query: 487 CDMEEKKDEED---STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRS 543
+ +E DE S NEGE + H + L V + IG+I+PY AQV LK L
Sbjct: 528 DEFQETADEATILGSKYNEGEIAIVKEHIENLRSFNVPGNSIGVISPYNAQVSHLKKLIH 587
Query: 544 KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLV 603
+ KL ++E+STVDGFQGREK+ II+S+VRSN K EVGFL + RR+NVA+TR RRQ +V
Sbjct: 588 DELKLTDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKEERRLNVAMTRPRRQLVVV 647
Query: 604 CDTETVSSDG--FLKRLIEYFEEHAE--YLSGSEYL 635
+ E + G +LK E+ EE+A+ Y + +YL
Sbjct: 648 GNIEVLQRCGNKYLKSWSEWCEENADVRYPNIDDYL 683
>gi|312137189|ref|YP_004004526.1| DNA helicase [Methanothermus fervidus DSM 2088]
gi|311224908|gb|ADP77764.1| DNA helicase [Methanothermus fervidus DSM 2088]
Length = 666
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 240/684 (35%), Positives = 360/684 (52%), Gaps = 98/684 (14%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNL--KCVDAQTGLMGKT 72
++ +V + L+++E+EAEI A A + +K G I NL K + + G T
Sbjct: 8 IKNYVRKLIRLVEMEREAEIEAMRAEMARLSAREREKVGRAINNLNGKILGRELGF---T 64
Query: 73 LLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQ--GVVYRLKDSSITVAFDDIP 130
L+ + K ++ K G D+V++ G+P G V + ITVA +D+P
Sbjct: 65 LVRYGRRK-EIETEIKVG--DLVLISK-----GNPLYSDLVGTVAEKGNRFITVALEDVP 116
Query: 131 EEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAF 190
+ L + +R++ AN++T+RRM D L L N ++ + E P + K F
Sbjct: 117 KWALKN-VRIDLYANDITFRRMIDNLKNL-----NENTIKVLSYILDEATPDLDIKKEEF 170
Query: 191 KPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASN 250
+ + L+ SQ +AISKAL++K+ F++HGP GTGKT T++EII QEVKRG+K+L A SN
Sbjct: 171 ELIDKKLNESQIEAISKALATKDFFLIHGPFGTGKTRTILEIIKQEVKRGNKVLVTAESN 230
Query: 251 IAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG 310
IAVDNI+ERL P ++ VR+GHP R+ + +E L QV S ++K++
Sbjct: 231 IAVDNILERL-PENMKCVRVGHPQRVSKKNIERTLAFQVEEHPKYSKIERLQKKI----D 285
Query: 311 KLLKTKDKN------TRR--------------------------------EIQKELRTLS 332
KL K +D+ RR I + L
Sbjct: 286 KLTKERDRYHKPTPALRRGLSDRQIIRNARRRRGVRGISPNVMISMANWIRINNRITELY 345
Query: 333 KEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLK 392
+ + + V ++I+ +DVVL+T + L + FD+VI+DEA+QA + I L +
Sbjct: 346 NKIDEIENRIVENIIEESDVVLSTNSSVYLEYLRDVEFDVVIVDEASQATIPSVLIPLSR 405
Query: 393 GSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNW 452
R ILAGDH QLPPT+ + +A K L +TLF L Y + + ML QYRM+ +M +
Sbjct: 406 APRFILAGDHRQLPPTILNPDA--KELEKTLFSILISKYPSK-SHMLEYQYRMNPKLMEF 462
Query: 453 SSKQLYNSKIKAHPSGVKRTS--------------STEPTLLLID-----IAGCDMEEKK 493
+ + YN KIK+ +G+++ S S E +LI I CD++ K
Sbjct: 463 PNNEFYNGKIKS-AAGLEKLSPKDLIKKEIKDENLSKELQEMLIRDPLTFIDTCDLDNKF 521
Query: 494 DEE----DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK 549
+ S N EA++ + I+SGV DIGIITPY QV L K+
Sbjct: 522 ERRFKGSPSLYNPLEADICILIQNFFIKSGVSTDDIGIITPYDDQVDYL-------SKIA 574
Query: 550 NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
+EV+TVDG+QGREKE IIISMVRSN K ++GFL D RR+NV++TRA+R+ ++ D+ET+
Sbjct: 575 KVEVNTVDGYQGREKEIIIISMVRSNKKGKIGFLEDLRRLNVSLTRAKRKLVIIGDSETL 634
Query: 610 SSDGFLKRLIEYFEEHAEYLSGSE 633
S +RLIEY +E+ Y S+
Sbjct: 635 SVHPSYRRLIEYCKENRFYYKLSK 658
>gi|148270052|ref|YP_001244512.1| putative DNA helicase [Thermotoga petrophila RKU-1]
gi|147735596|gb|ABQ46936.1| putative DNA helicase [Thermotoga petrophila RKU-1]
Length = 650
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 236/682 (34%), Positives = 367/682 (53%), Gaps = 99/682 (14%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNL--KCVDAQTGLMG 70
+++Q+F+ + L++LE+ AEI+A + + + +KKG T+L L K + + G
Sbjct: 1 MTVQQFIKKLVRLVELERNAEINAMLDEMKRLSGEEREKKGRTVLGLTGKFIGEELGYF- 59
Query: 71 KTLLEF-QSTKGDVLPAHKFGTHDVVVL---KPNKADLGSPALGQGVVYRLKDSSITVAF 126
L+ F + K D + G D+V++ P K+D + +G + ITVA
Sbjct: 60 --LVRFGRRKKIDT----EIGVGDLVLISKGNPLKSDYTGTVVEKG------ERFITVAV 107
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
D +P L + +R++ A+++T+RR + L+ LS G A + L G++KP +
Sbjct: 108 DRLPSWKLKN-VRIDLFASDITFRRQIENLMTLS---SEGKKA--LEFLLGKRKPEESFE 161
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILAC 246
+ F PF+ L+ SQ++A+S AL S + F++HGP GTGKT T+VE I QEV RG KIL
Sbjct: 162 E-EFTPFDEGLNESQREAVSLALGSSDFFLIHGPFGTGKTRTLVEYIRQEVARGKKILVT 220
Query: 247 AASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
A SN+AVDN+VERL +V LVR+GHP+R+ + ES L Q+ + SS ++K MK
Sbjct: 221 AESNLAVDNLVERLW-GKVSLVRIGHPSRVSSHLKESTLAHQI---ETSSEYEKVKK-MK 275
Query: 307 ALNGKLLKTKDKNT------RR-----------EIQKELRTLSKEE-------------- 335
KL++ +D T RR E R SKE+
Sbjct: 276 EELAKLIEKRDSFTKPSPQWRRGLSDKKILEYAEKNWSARGASKEKIKEMAEWIKLNSQI 335
Query: 336 -------RKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWI 388
+++++ + +++ A VVL+T + A + FD+V++DEA+QA + I
Sbjct: 336 QDIRDLIERKEEIIASRIVREAQVVLSTNSSAALEIISGIVFDVVVVDEASQATIPSILI 395
Query: 389 ALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEH 448
+ KG + +LAGDH QLPPT+ S +A K L RTLFE L Y E +S+L QYRM+E
Sbjct: 396 PISKGKKFVLAGDHKQLPPTILSEDA--KDLSRTLFEELITRY-PEKSSLLDTQYRMNEL 452
Query: 449 IMNWSSKQLYNSKIKAHPS---------GVKRTS---------STEPTLLLIDIAGCD-- 488
+M + S++ Y+ K+KA GV+ + S + L+ ID
Sbjct: 453 LMEFPSEEFYDGKLKAAEKVRNITLFDLGVEIPNFGKFWDVVLSPKNVLVFIDTKNRSDR 512
Query: 489 MEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK-ILRSKDDK 547
E ++ + S N EA++ ++L+ GV IGIITPY QV L++ ++ +K
Sbjct: 513 FERQRKDSPSRENPLEAQIVKEVVEKLLSMGVKEDWIGIITPYDDQVNLIRELIEAK--- 569
Query: 548 LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTE 607
+EV +VDGFQGREKE IIIS VRSN E+GFL D RR+NV++TRA+R+ D+
Sbjct: 570 ---VEVHSVDGFQGREKEVIIISFVRSNKNGEIGFLEDLRRLNVSLTRAKRKLIATGDSS 626
Query: 608 TVSSDGFLKRLIEYFEEHAEYL 629
T+S +R +E+ ++ Y+
Sbjct: 627 TLSVHPTYRRFVEFVKKKGTYV 648
>gi|315231815|ref|YP_004072251.1| ATP-dependent helicase-like protein [Thermococcus barophilus MP]
gi|315184843|gb|ADT85028.1| ATP-dependent helicase-like protein [Thermococcus barophilus MP]
Length = 652
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 226/675 (33%), Positives = 356/675 (52%), Gaps = 94/675 (13%)
Query: 18 FVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNL--KCVDAQTGLMGKTLLE 75
+++ + L++LE+EAEI A +K G +L L K + + G
Sbjct: 6 YINHLKELVELEREAEIEAMREEMRKLTGYEREKVGRAVLGLNGKIIGEEFGYKLVKYGR 65
Query: 76 FQSTKGDVLPAHKFGTHDVVVL---KPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEE 132
Q K ++ D+VV+ P +DL +G + + VA + +P
Sbjct: 66 KQEIKTEI------SVGDLVVISRGNPLASDLIGTVTEKGKRF------LVVALETVPSW 113
Query: 133 GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKP 192
L + +R++ AN+VT++R + L +LSK + L G +KP ++ FKP
Sbjct: 114 ALRN-VRIDLYANDVTFKRQMENLERLSKSGKQALRFAL-----GLEKPKE-SVEVEFKP 166
Query: 193 FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIA 252
F+ L+ SQ+ A+S AL ++ F++HGP GTGKT T+ E+ILQEVKRG K+LA A SN+A
Sbjct: 167 FDKQLNESQRKAVSFALGGEDFFLIHGPFGTGKTRTLAEVILQEVKRGKKVLATAESNVA 226
Query: 253 VDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKL 312
VDN+VERL +V+LVRLGHP+R+ + ES L QV + KE+++ +L
Sbjct: 227 VDNLVERLW-GKVKLVRLGHPSRVSKHLKESTLAYQVETHEKFRRV----KELRSKAERL 281
Query: 313 LKTKDKNTR-----------REI---------------------------QKELRTLSKE 334
+D+ T+ R+I ++++ L E
Sbjct: 282 AMLRDQCTKPTPQWRRGLTDRQILRLAERGIGARGIPARVVKSMAQWIAFNEKVQKLYDE 341
Query: 335 ERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGS 394
+K ++ + +VI ADVVL+T + A + + +FD+ ++DEA+QA + I + K
Sbjct: 342 AKKLEEEIIREVISKADVVLSTNSSAALDFIKDINFDVAVVDEASQATIPSVLIPIAKAK 401
Query: 395 RCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSS 454
+ ILAGDH QLPPT+ S EA K L TLFE+L LY + ML +QYRM+E +M + S
Sbjct: 402 KFILAGDHKQLPPTILSEEA--KELSETLFEKLIKLYPSK-AKMLEIQYRMNERLMEFPS 458
Query: 455 KQLYNSKIKAHPS---------GVKRTSSTEPT---------LLLIDIAGCDMEEKKDEE 496
++ YN +IKA+ G++ EP L+ +D + + ++ +
Sbjct: 459 REFYNGRIKAYDGVKNITLLDLGIRVFHFGEPWDSILNPKEPLVFVDTSKHPEKWERQRK 518
Query: 497 DSTMNEG--EAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVS 554
S E EA++ KRL++ G+ IG+ITPY Q L+ L D+ +EV
Sbjct: 519 GSLSRENPLEAKLVKEIVKRLLRMGIRPESIGVITPYDDQRDLISSLIENDE----IEVK 574
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGF 614
TVDG+QGREKE II+S VRSN K E+GFL+D RR+NV++TRA+R+ + D+ET+ +
Sbjct: 575 TVDGYQGREKEVIILSFVRSNKKGELGFLTDLRRLNVSLTRAKRKLIAIGDSETLGAHPT 634
Query: 615 LKRLIEYFEEHAEYL 629
KR +E+ ++ ++
Sbjct: 635 YKRFVEFVKKKGAFI 649
>gi|281412067|ref|YP_003346146.1| DNA helicase [Thermotoga naphthophila RKU-10]
gi|281373170|gb|ADA66732.1| DNA helicase [Thermotoga naphthophila RKU-10]
Length = 650
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 235/681 (34%), Positives = 365/681 (53%), Gaps = 97/681 (14%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNL--KCVDAQTGLMG 70
+++Q+F+ + L++LE+ AEI+A + + + +KKG +L L K + + G
Sbjct: 1 MTVQQFIKKLVRLVELERNAEINAMLDEMKRLSGEEREKKGRAVLGLTGKFIGEELGYF- 59
Query: 71 KTLLEF-QSTKGDVLPAHKFGTHDVVVL---KPNKADLGSPALGQGVVYRLKDSSITVAF 126
L+ F + K D + G D+V++ P K+D + +G + ITVA
Sbjct: 60 --LVRFGRRKKIDT----EIGVGDLVLISKGNPLKSDYTGTVVEKG------ERFITVAV 107
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
D +P L + +R++ A+++T+RR + L+ LS G A + L G++KP +
Sbjct: 108 DRLPSWKLKN-VRIDLFASDITFRRQIENLMTLS---PEGKKA--LEFLLGKRKPEESFE 161
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILAC 246
+ F PF+ L+ SQ++A+S AL S + F++HGP GTGKT T+VE I QEV RG KIL
Sbjct: 162 E-EFTPFDEGLNESQREAVSLALGSSDFFLIHGPFGTGKTRTLVEYIRQEVARGKKILVT 220
Query: 247 AASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
A SN+AVDN+VERL +V LVR+GHP+R+ + ES L Q+ + SS ++K MK
Sbjct: 221 AESNLAVDNLVERLW-GKVSLVRIGHPSRVSSHLKESTLAHQI---ETSSEYEKVKK-MK 275
Query: 307 ALNGKLLKTKDKNT------RR-----------EIQKELRTLSKEE-------------- 335
KL++ +D T RR E R +SKE+
Sbjct: 276 EELAKLIEKRDSFTKPSPQWRRGLSDKKILEYAEKNWSARGVSKEKIKEMAEWIKLNSQI 335
Query: 336 -------RKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWI 388
+++++ +++ A VVL+T + A + FD+V++DEA+QA + I
Sbjct: 336 QDIRDLIERKEEIIANRIVREAQVVLSTNSSAALEIISGIVFDVVVVDEASQATIPSILI 395
Query: 389 ALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEH 448
+ KG + +LAGDH QLPPT+ S +A K L RTLFE L Y E +S+L QYRM+E
Sbjct: 396 PISKGKKFVLAGDHKQLPPTILSEDA--KDLSRTLFEELITRY-PEKSSLLDTQYRMNEL 452
Query: 449 IMNWSSKQLYNSKIKAHPS---------GVKRTS---------STEPTLLLIDIAGCD-- 488
+M + S++ Y+ K+KA GV+ + S + L+ ID
Sbjct: 453 LMAFPSEEFYDGKLKAAEEVRNITLFDLGVEIPNFGKFWDVVLSPKNVLVFIDTKNRSDR 512
Query: 489 MEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKL 548
E ++ + S N EA++ ++L+ GV + IGIITPY QV L++ L
Sbjct: 513 FERQRKDSPSRENPLEAQIVKEVVEKLLSMGVKENWIGIITPYDDQVNLIRELIE----- 567
Query: 549 KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTET 608
+ +EV +VDGFQGREKE IIIS VRSN E+GFL D RR+NV++TRA+R+ D+ T
Sbjct: 568 EKVEVHSVDGFQGREKEVIIISFVRSNKNGEIGFLEDLRRLNVSLTRAKRKLIATGDSST 627
Query: 609 VSSDGFLKRLIEYFEEHAEYL 629
+S +R +E+ ++ Y+
Sbjct: 628 LSVHPTYRRFVEFVKKKGTYV 648
>gi|418045943|ref|ZP_12684037.1| DNA helicase, partial [Thermotoga maritima MSB8]
gi|351675496|gb|EHA58656.1| DNA helicase, partial [Thermotoga maritima MSB8]
Length = 642
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 236/674 (35%), Positives = 363/674 (53%), Gaps = 99/674 (14%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNL--KCVDAQTGLMG 70
+++Q+F+ + L++LE+ AEI+A + + + +KKG +L L K + + G
Sbjct: 1 MTVQQFIKKLVRLVELERNAEINAMLDEMKRLSGEEREKKGRAVLGLTGKFIGEELGYF- 59
Query: 71 KTLLEF-QSTKGDVLPAHKFGTHDVVVL---KPNKADLGSPALGQGVVYRLKDSSITVAF 126
L+ F + K D + G D+V++ P K+D + +G + ITVA
Sbjct: 60 --LVRFGRRKKIDT----EIGVGDLVLISKGNPLKSDYTGTVVEKG------ERFITVAV 107
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
D +P L + +R++ A+++T+RR + L+ LS G A + L G++KP +
Sbjct: 108 DRLPSWKLKN-VRIDLFASDITFRRQIENLMTLS---SEGKKA--LEFLLGKRKPEESFE 161
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILAC 246
+ F PF+ L+ SQ++A+S AL S + F++HGP GTGKT T+VE I QEV RG KIL
Sbjct: 162 E-EFTPFDEGLNESQREAVSLALGSSDFFLIHGPFGTGKTRTLVEYIRQEVARGKKILVT 220
Query: 247 AASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
A SN+AVDN+VERL +V LVR+GHP+R+ + ES L Q+ + SS ++K MK
Sbjct: 221 AESNLAVDNLVERLW-GKVSLVRIGHPSRVSSHLKESTLAHQI---ETSSEYEKVKK-MK 275
Query: 307 ALNGKLLKTKDKNT------RR-----------EIQKELRTLSKEE-------------- 335
KL+K +D T RR E R +SKE+
Sbjct: 276 EELAKLIKKRDSFTKPSPQWRRGLSDKKILEYAEKNWSARGVSKEKIKEMAEWIKLNSQI 335
Query: 336 -------RKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWI 388
+++++ + +++ A VVL+T + A L FD+V++DEA+QA + I
Sbjct: 336 QDIRDLIERKEEIIASRIVREAQVVLSTNSSAALEILSGIVFDVVVVDEASQATIPSILI 395
Query: 389 ALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEH 448
+ KG + +LAGDH QLPPT+ S +A K L RTLFE L Y E +S+L QYRM+E
Sbjct: 396 PISKGKKFVLAGDHKQLPPTILSEDA--KDLSRTLFEELITRY-PEKSSLLDTQYRMNEL 452
Query: 449 IMNWSSKQLYNSKIKAHPS---------GVKRTS---------STEPTLLLIDIAGCD-- 488
+M + S++ Y+ K+KA GV+ + S + L+ ID
Sbjct: 453 LMEFPSEEFYDGKLKAAEKVRNITLFDLGVEIPNFGKFWDVVLSPKNVLVFIDTKNRSDR 512
Query: 489 MEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK-ILRSKDDK 547
E ++ + S N EA++ ++L+ GV IGIITPY QV L++ ++ +K
Sbjct: 513 FERQRKDSPSRENPLEAQIVKEVVEKLLSMGVKEDWIGIITPYDDQVNLIRELIEAK--- 569
Query: 548 LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTE 607
+EV +VDGFQGREKE IIIS VRSN E+GFL D RR+NV++TRA+R+ D+
Sbjct: 570 ---VEVHSVDGFQGREKEVIIISFVRSNKNGEIGFLEDLRRLNVSLTRAKRKLIATGDSS 626
Query: 608 TVSSDGFLKRLIEY 621
T+S +R +E+
Sbjct: 627 TLSVHPTYRRFVEF 640
>gi|365764642|gb|EHN06164.1| Hcs1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 683
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 239/695 (34%), Positives = 374/695 (53%), Gaps = 89/695 (12%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLE 75
+E S I E+E +I + + ++ + G I N+ + ++GL+GK +E
Sbjct: 3 KELASKFLSSIKHEREQDIQTTSRLLTTLSIQQLVQNGLAINNIHLENIRSGLIGKLYME 62
Query: 76 F--------QSTKGDVLPAHKFGTHDVVVLKPNKADL----------------GSPALGQ 111
+ +GD+ K G D+V+++P K + G A
Sbjct: 63 LGPNLAVNDKIQRGDI----KVG--DIVLVRPAKTKVNTKTKPKVKKVSEDSNGEQAECS 116
Query: 112 GVVYRLKDSSITVAFD---DIPEEGLNS--PLRLEKLANEVTYRRMKDALIQLSKGVQNG 166
GVVY++ + IT+A + D+ S L + K N VTY RM+ + +LS+ +
Sbjct: 117 GVVYKMSXTQITIALEESQDVIATTFYSYSKLYILKTTNVVTYNRMESTMRKLSEI--SS 174
Query: 167 PAAGLIPVLFGEQKPTVLKKDIAF---KPF-NSNLDHSQKDAISKALSSKNVFMLHGPPG 222
P I ++P + + +F K F N NL+ SQK AI+ A+++ ++ ++HGPPG
Sbjct: 175 PIQDKIIQYLVNERPFIPNTN-SFQNIKSFLNPNLNDSQKTAINFAINN-DLTIIHGPPG 232
Query: 223 TGKTTTVVEIILQEVKRG--SKILACAASNIAVDNIVERL---VPHRVRLVRLGHPARLL 277
TGKT T++E+I Q + + +IL C SNI+VD I+ERL VP+ + L+R+GHPARLL
Sbjct: 233 TGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNL-LLRIGHPARLL 291
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERK 337
+LD +L N+ + DI +E+ L + K K+ R+E E++ L K+ +K
Sbjct: 292 DSNKRHSLD--ILSKKNT-IVKDISQEIDKLIQENKKLKNYKQRKENWNEIKLLRKDLKK 348
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVSRKL-----DNTSF---DLVIIDEAAQALEIACWIA 389
R+ + D+I + +V+TTL G+ SR+L D+ +F D +IIDE +QA+E CWI
Sbjct: 349 REFKTIKDLIIQSRIVVTTLHGSSSRELCSLYRDDPNFQLFDTLIIDEVSQAMEPQCWIP 408
Query: 390 LL----KGSRCILAGDHLQLPPTVQSVEAEK--KGLGRTLFERLADLYGD-EVTSMLTVQ 442
L+ + + +LAGD+ QLPPT+++ + + L TLF+R+ ++ ++ L VQ
Sbjct: 409 LIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDRIIKIFPKRDMVKFLNVQ 468
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT---------------LLLIDIAGC 487
YRM++ IM + S +YN K+ A + R PT L+ D G
Sbjct: 469 YRMNQKIMEFPSHSMYNGKLLADATVANRLLIDLPTVDATPSEDDDDTKIPLIWYDTQGD 528
Query: 488 DMEEKKDEED---STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSK 544
+ +E DE S NEGE + H + L V + IG+I+PY AQV LK L
Sbjct: 529 EFQETADEATILGSKYNEGEIAIVKEHIENLRSFNVPENSIGVISPYNAQVSHLKKLIHD 588
Query: 545 DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
+ KL ++E+STVDGFQGREK+ II+S+VRSN K EVGFL + RR+NVA+TR RRQ +V
Sbjct: 589 ELKLTDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKEERRLNVAITRPRRQLVVVG 648
Query: 605 DTETVSSDG--FLKRLIEYFEEHAE--YLSGSEYL 635
+ E + G +LK E+ EE+A+ Y + +YL
Sbjct: 649 NIEVLQRCGNKYLKSWSEWCEENADVRYPNIDDYL 683
>gi|15607027|ref|NP_214409.1| DNA helicase [Aquifex aeolicus VF5]
gi|2984278|gb|AAC07803.1| DNA helicase [Aquifex aeolicus VF5]
Length = 530
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 206/522 (39%), Positives = 293/522 (56%), Gaps = 70/522 (13%)
Query: 170 GLIPVLFGEQK--PTVLKKDIA---FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTG 224
GL P G K PT +K I+ +K + L+ QK A+ +AL ++ VF++HGPPGTG
Sbjct: 17 GLTPSHKGSNKYLPTGVKGHISVLVYKSGMTKLNAYQKKAVERALKAEKVFLIHGPPGTG 76
Query: 225 KTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESA 284
KTTT+VE I + + G K+LA A SN+AVDN+VERLV V++VR+G+P R+L +
Sbjct: 77 KTTTLVECIKRLAQEGYKVLATADSNVAVDNLVERLVRENVKVVRVGNPVRVLKTIQRHT 136
Query: 285 LDAQVLRGDNSSLASDIRKEMKAL---NGKLLKTKDKNTR----REIQKE---------- 327
LD V A I +E+ L K +K + + R EI K
Sbjct: 137 LDYLVQFEPEFDKARKIYEEIDNLKEEQKKYVKPEPRYRRGLSDEEILKRAKTGTPVRGL 196
Query: 328 ----LRTLSKEERKRQQL-------------AVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
LR+++K + ++++ AV ++ A VV TT + A S L N +F
Sbjct: 197 SPKILRSMAKWIKLQEKVKELYEKAKKEEEKAVNKILSRAQVVCTTNSTAGSEVLQNLNF 256
Query: 371 DLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
D+VIIDEA QA E +C I L+KG + I+AGDH QLPPTV S EA+ + L TLFERL DL
Sbjct: 257 DVVIIDEATQATEPSCLIPLIKGKKLIMAGDHKQLPPTVLSQEAQ-EALSYTLFERLLDL 315
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNS--------------------KIKAHPSGVK 470
YG+E+ +L +QYRM++ IM +S+K Y K+K P K
Sbjct: 316 YGEEIYEILRIQYRMNKKIMEFSNKMFYEGKLIADKSVENHTIKDLINPEKLKEIPEPFK 375
Query: 471 RTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITP 530
E ++ I++ G E+++ S NE EA+VA+ + L++ G+ + IG+I+P
Sbjct: 376 SVLEPEKVVVFINVRG--KEKQRRGSTSFYNEEEAKVAVKIVEYLMKIGLRSEHIGVISP 433
Query: 531 YAAQVVLLKILRSKDDKLKNMEVS--TVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
Y QV L ++ LK+ EV TVDGFQGREKE IIIS VRSN K E+GFL D RR
Sbjct: 434 YEDQVNFL------EELLKDFEVEVKTVDGFQGREKEVIIISFVRSNEKGEIGFLKDYRR 487
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLS 630
+NVA+TRARR+ + + +T+SSD K+ I Y + Y++
Sbjct: 488 LNVALTRARRKLITLGNEKTLSSDEVYKQFIGYVKSIGGYIN 529
>gi|14521437|ref|NP_126913.1| DNA helicase, [Pyrococcus abyssi GE5]
gi|5458655|emb|CAB50143.1| DNA helicase, putative [Pyrococcus abyssi GE5]
Length = 653
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 218/598 (36%), Positives = 331/598 (55%), Gaps = 87/598 (14%)
Query: 93 DVVVLK---PNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTY 149
D+VV+ P K+DL + +G + I VA + +PE L +R++ AN++T+
Sbjct: 77 DLVVISKRDPLKSDLLGTVVEKGKRF------IVVALETVPEWALRD-VRIDLYANDITF 129
Query: 150 RRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKAL 209
RR + L + K G A + G +P+ +++ F PF+ +L+ SQ+ AISKAL
Sbjct: 130 RRWLENLNTIKKA---GKRA--LRFYLGLDEPS-QGEEVNFVPFDKSLNRSQRKAISKAL 183
Query: 210 SSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVR 269
S++ F++HGP GTGKT T+VE+I QEVKRG+K+LA A SN+AVDN+VERL +++VR
Sbjct: 184 GSEDFFLVHGPFGTGKTRTLVELIRQEVKRGNKVLATAESNVAVDNLVERLSRSGIKIVR 243
Query: 270 LGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELR 329
+GHP+R+ + E+ L + + + L ++R E++ + L + +D T + K R
Sbjct: 244 IGHPSRVSKHLHETTLAYLITQHE---LYGELR-ELRVIGQSLAEKRDTYT-KPTPKFRR 298
Query: 330 TLSKEE---------------------------------------RKRQQLAVTDVIKNA 350
LS EE RK ++ D+I+ A
Sbjct: 299 GLSDEEIIKLAERKRGARGLSARLIMEMAEWIKLNRQVQKAFDDARKLEERIARDIIREA 358
Query: 351 DVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQ 410
DVVLTT + A +D ++D+ IIDEA Q+ + I L K R +LAGDH QLPPT+
Sbjct: 359 DVVLTTNSSAALEVVDYDTYDVAIIDEATQSTIPSILIPLNKVERFVLAGDHKQLPPTIL 418
Query: 411 SVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS--G 468
S+EA++ L RTLFE L + Y + + ML VQYRM+E IM + SK+ Y KI A S G
Sbjct: 419 SLEAQE--LSRTLFEGLIERYPWK-SEMLVVQYRMNERIMEFPSKEFYGGKIIADESVRG 475
Query: 469 VK---------------RTSSTEPTLLLIDIAGCD--MEEKKDEEDSTMNEGEAEVAMAH 511
+ + + E ++ ID + + E ++ +S N EAE+
Sbjct: 476 ITLRDLVEYQSPNDSWGKILNPENVIVFIDTSKAENKWERQRRGSESRENPLEAEIVAKI 535
Query: 512 AKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISM 571
+L+ GV IG+ITPY Q L+ + +D +EV TVDG+QGREKE II+S+
Sbjct: 536 VDKLLSIGVKPEWIGVITPYDDQRDLISMKVPED-----VEVKTVDGYQGREKEVIILSL 590
Query: 572 VRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYL 629
VRSN E+GFL D RR+NV++TRA+R+ +V D+ T+SS K++IE+F+E ++
Sbjct: 591 VRSNKLGEIGFLKDLRRLNVSLTRAKRKLIVVGDSSTLSSHETYKKMIEFFKEKGCFI 648
>gi|83816360|ref|YP_444497.1| DNA helicase [Salinibacter ruber DSM 13855]
gi|83757754|gb|ABC45867.1| putative DNA helicase [Salinibacter ruber DSM 13855]
Length = 707
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 212/647 (32%), Positives = 324/647 (50%), Gaps = 81/647 (12%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPAL 109
+ +G +L ++ D GL G + + KG LP H+ D+V++ +K D
Sbjct: 61 EDRGRALLRMRGRDEGEGLGGHHVKLMREQKGQPLPDHEIRVGDLVMI--SKTDPLRDDN 118
Query: 110 GQGVVYRLKDSSITVAFDDIPE-------------EGLNSPLRLEKLANEVTYRRMKDAL 156
G V ++ + SIT +FD P+ E + S LR++ N++ Y+RM+DAL
Sbjct: 119 PTGTVTQVTNYSITASFDPKPDGWVFGKGLRPDRREEVVSGLRVDLYVNDIPYQRMQDAL 178
Query: 157 IQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFM 216
+L +G L V G P + NS L+ +Q+ A+ KA+++ +V +
Sbjct: 179 AKLPTA--DGALKQLRDVSTGVASPAATEPAPIDDWHNSALNDAQRRAVRKAVATDDVHL 236
Query: 217 LHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARL 276
+HGPPGTGKTTT E++ Q V RG +LA AASN AVDN+V L +VRLGHPAR+
Sbjct: 237 IHGPPGTGKTTTATEVLQQCVDRGESVLATAASNTAVDNVVAFLAEQGTDVVRLGHPARV 296
Query: 277 LPQVLESALDAQVLRGDNSSLAS----------DIRKEMKALNGKLLKTKDKNTRRE--- 323
++ LDAQ+ D + D ++++ A +G+ + +E
Sbjct: 297 NDRLRTHTLDAQIEDTDTHRRSQQKREKAFAVLDRQEDLTAPSGRWRRGMSDRKIKERAE 356
Query: 324 ---------------------IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS 362
+Q+ L E +Q A+ +V+ ADVV +T + A S
Sbjct: 357 QGRGSRGVPPERIEEMAAWLALQERADALFDEAEALEQEAIDEVLGAADVVCSTNSTAGS 416
Query: 363 RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRT 422
LD +FD ++IDEA QA +CWI + R +L GDH QLPPT+Q+ EA ++GL T
Sbjct: 417 DLLDGHTFDTLVIDEATQATAPSCWIPMTHARRAVLVGDHKQLPPTIQNQEAARRGLRHT 476
Query: 423 LFERLADLY------GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS-- 474
LFERLA + + S+L QYRMHE IM + ++ Y+ +++A + RT +
Sbjct: 477 LFERLAHHHETAPEAPGSIRSLLRRQYRMHETIMGFPNRTFYDGRLEADDTARHRTLADL 536
Query: 475 -----------------TEPTLLLIDIAGCDM-EEKKDEEDSTMNEGEAEVAMAHAKRLI 516
E +L+ +D +G D E ++ S N EA++ L+
Sbjct: 537 GVPEHALPADERRAILDPEASLVFVDTSGIDAPEHQRSGSHSRENPREADLIAQLTTALL 596
Query: 517 QSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNS 576
++GV S I +I+PY QV + + D E TVDGFQGREKE +++S+V SN
Sbjct: 597 EAGVAPSAIAVISPYDDQVDRIDRALAPD----GPETDTVDGFQGREKEIVLLSLVHSND 652
Query: 577 KKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFE 623
+ +GFL + RR NVAVTRA R+ +V D TV++ L + Y E
Sbjct: 653 RGAIGFLDEPRRFNVAVTRAERKAVVVGDASTVAAADVLGAFVRYAE 699
>gi|380742039|tpe|CCE70673.1| TPA: DNA helicase, putative [Pyrococcus abyssi GE5]
Length = 629
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 216/598 (36%), Positives = 330/598 (55%), Gaps = 87/598 (14%)
Query: 93 DVVVLK---PNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTY 149
D+VV+ P K+DL + +G + I VA + +PE L +R++ AN++T+
Sbjct: 53 DLVVISKRDPLKSDLLGTVVEKGKRF------IVVALETVPEWALRD-VRIDLYANDITF 105
Query: 150 RRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKAL 209
RR + L + K + + G +P+ +++ F PF+ +L+ SQ+ AISKAL
Sbjct: 106 RRWLENLNTIKKAGKRA-----LRFYLGLDEPS-QGEEVNFVPFDKSLNRSQRKAISKAL 159
Query: 210 SSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVR 269
S++ F++HGP GTGKT T+VE+I QEVKRG+K+LA A SN+AVDN+VERL +++VR
Sbjct: 160 GSEDFFLVHGPFGTGKTRTLVELIRQEVKRGNKVLATAESNVAVDNLVERLSRSGIKIVR 219
Query: 270 LGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELR 329
+GHP+R+ + E+ L + + + L ++R E++ + L + +D T + K R
Sbjct: 220 IGHPSRVSKHLHETTLAYLITQHE---LYGELR-ELRVIGQSLAEKRDTYT-KPTPKFRR 274
Query: 330 TLSKEE---------------------------------------RKRQQLAVTDVIKNA 350
LS EE RK ++ D+I+ A
Sbjct: 275 GLSDEEIIKLAERKRGARGLSARLIMEMAEWIKLNRQVQKAFDDARKLEERIARDIIREA 334
Query: 351 DVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQ 410
DVVLTT + A +D ++D+ IIDEA Q+ + I L K R +LAGDH QLPPT+
Sbjct: 335 DVVLTTNSSAALEVVDYDTYDVAIIDEATQSTIPSILIPLNKVERFVLAGDHKQLPPTIL 394
Query: 411 SVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS--G 468
S+EA++ L RTLFE L + Y + + ML VQYRM+E IM + SK+ Y KI A S G
Sbjct: 395 SLEAQE--LSRTLFEGLIERYPWK-SEMLVVQYRMNERIMEFPSKEFYGGKIIADESVRG 451
Query: 469 VK---------------RTSSTEPTLLLIDIAGCD--MEEKKDEEDSTMNEGEAEVAMAH 511
+ + + E ++ ID + + E ++ +S N EAE+
Sbjct: 452 ITLRDLVEYQSPNDSWGKILNPENVIVFIDTSKAENKWERQRRGSESRENPLEAEIVAKI 511
Query: 512 AKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISM 571
+L+ GV IG+ITPY Q L+ + +D +EV TVDG+QGREKE II+S+
Sbjct: 512 VDKLLSIGVKPEWIGVITPYDDQRDLISMKVPED-----VEVKTVDGYQGREKEVIILSL 566
Query: 572 VRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYL 629
VRSN E+GFL D RR+NV++TRA+R+ +V D+ T+SS K++IE+F+E ++
Sbjct: 567 VRSNKLGEIGFLKDLRRLNVSLTRAKRKLIVVGDSSTLSSHETYKKMIEFFKEKGCFI 624
>gi|349579545|dbj|GAA24707.1| K7_Hcs1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 683
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 239/695 (34%), Positives = 374/695 (53%), Gaps = 89/695 (12%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLE 75
+E S I E+E +I + + ++ + G I N+ + ++GL+GK +E
Sbjct: 3 KELASKFLSSIKHEREQDIQTTSRLLTTLSIQQLVQNGLAINNIHLENIRSGLIGKLYME 62
Query: 76 F--------QSTKGDVLPAHKFGTHDVVVLKPNKADL----------------GSPALGQ 111
+ +GD+ K G D+V+++P K + G A
Sbjct: 63 LGPNLAVNDKIQRGDI----KVG--DIVLVRPAKTKVNTKTKPKVKKVSEDSNGEQAECS 116
Query: 112 GVVYRLKDSSITVAFD---DIPEEGLNS--PLRLEKLANEVTYRRMKDALIQLSKGVQNG 166
GVVY++ D+ IT+A + D+ S L + K N VTY RM+ + +LS+ +
Sbjct: 117 GVVYKMSDTQITIALEESQDVIATTFYSYSKLYILKTTNVVTYNRMESTMRKLSEI--SS 174
Query: 167 PAAGLIPVLFGEQKPTVLKKDIAF---KPF-NSNLDHSQKDAISKALSSKNVFMLHGPPG 222
P I ++P + + +F K F N NL+ SQK AI+ A+++ ++ ++HGPPG
Sbjct: 175 PIQDKIIQYLVNERPFIPNTN-SFQNIKSFLNPNLNDSQKTAINFAINN-DLTIIHGPPG 232
Query: 223 TGKTTTVVEIILQEVKRG--SKILACAASNIAVDNIVERL---VPHRVRLVRLGHPARLL 277
TGKT T++E+I Q + + +IL C SNI+VD I+ERL VP+ + L+R+GHPARLL
Sbjct: 233 TGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNL-LLRIGHPARLL 291
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERK 337
+LD +L N+ + DI +E+ L + K K+ R+E E++ L K+ +K
Sbjct: 292 DSNKRHSLD--ILSKKNT-IVKDISQEIDKLIQENKKLKNYKQRKENWNEIKLLRKDLKK 348
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVSRKL-----DNTSF---DLVIIDEAAQALEIACWIA 389
R+ + D+I + +V+TTL G+ SR+L D+ +F D +IIDE +QA+E CWI
Sbjct: 349 REFKTIKDLIIQSRIVVTTLHGSSSRELCSLYRDDPNFQLFDTLIIDEVSQAMEPQCWIP 408
Query: 390 LL----KGSRCILAGDHLQLPPTVQSVEAEK--KGLGRTLFERLADLYGD-EVTSMLTVQ 442
L+ + + +LAGD+ QLPPT+++ + + L TLF+R+ ++ ++ L VQ
Sbjct: 409 LIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDRIIKIFPKRDMVKFLNVQ 468
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT---------------LLLIDIAGC 487
YRM++ IM + S +YN K+ A + R PT L+ D G
Sbjct: 469 YRMNQKIMEFPSHSMYNGKLLADATVANRLLIDLPTVDATPSEDDDDTKIPLIWYDTQGD 528
Query: 488 DMEEKKDEED---STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSK 544
+ +E DE S NE E + H + L V + IG+I+PY AQV LK L
Sbjct: 529 EFQETADEATILGSKYNEDEIAIVKEHIENLRSFNVPENSIGVISPYNAQVSHLKKLIHD 588
Query: 545 DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
+ KL ++E+STVDGFQGREK+ II+S+VRSN K EVGFL + RR+NVA+TR RRQ +V
Sbjct: 589 ELKLTDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKEERRLNVAMTRPRRQLVVVG 648
Query: 605 DTETVSSDG--FLKRLIEYFEEHAE--YLSGSEYL 635
+ E + G +LK E+ EE+A+ Y + +YL
Sbjct: 649 NIEVLQRCGNKYLKSWSEWCEENADVRYPNIDDYL 683
>gi|337284021|ref|YP_004623495.1| DNA helicase [Pyrococcus yayanosii CH1]
gi|334899955|gb|AEH24223.1| DNA helicase [Pyrococcus yayanosii CH1]
Length = 656
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 218/602 (36%), Positives = 329/602 (54%), Gaps = 88/602 (14%)
Query: 93 DVVVLK---PNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTY 149
D+VV+ P K+DL + +G + ITVA + +PE L +RL+ AN++T+
Sbjct: 78 DLVVISKRDPLKSDLVGTVVEKGKRF------ITVALETVPEWALKG-IRLDLYANDITF 130
Query: 150 RRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKAL 209
RR + L L +G + + G ++P + + F+P + L+ SQK A+S AL
Sbjct: 131 RRWLENLDNLREGGRKA-----LEFYLGLREPEK-SEPVEFEPIDKRLNASQKKAVSLAL 184
Query: 210 SSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVR 269
S + F++HGP GTGKT T+ E+I QEVKRG+K+LA A SN+AVDN+VERL + +VR
Sbjct: 185 GSSDFFLIHGPFGTGKTRTLAELIRQEVKRGNKVLATAESNVAVDNLVERLA--ELNVVR 242
Query: 270 LGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTR-------- 321
+GHP+R+ + E+ L Q+ R + L ++R+ + G L + +D T+
Sbjct: 243 IGHPSRVSKHLHETTLAYQMTRHE---LYGELRELLVTAQG-LAEKRDTYTKPLPKFRRG 298
Query: 322 ------------------------RE------IQKELRTLSKEERKRQQLAVTDVIKNAD 351
RE + ++++ E RK ++ ++I+ AD
Sbjct: 299 LSDNEILRLAERGIGARGVPARLIREMAEWIKLNRQVQKAFDEARKLEERIAREIIREAD 358
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
VVLTT + A LD FD+ +IDEA QA + I + + R ILAGDH QLPPT+ S
Sbjct: 359 VVLTTNSSAALEILDVADFDVAVIDEATQATIPSILIPINRVERFILAGDHRQLPPTILS 418
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS---- 467
+EA+ L +TLFE L + Y E ++ML +QYRM+E +M + S++ Y KI A S
Sbjct: 419 LEAQ--ALSKTLFEGLIERY-PEKSAMLNIQYRMNERLMAFPSREFYEGKIIADESVKNI 475
Query: 468 -----GVKRTSSTEP---------TLLLIDIAGC--DMEEKKDEEDSTMNEGEAEVAMAH 511
GVK +EP L+ ID A E ++ +S N EA++
Sbjct: 476 TLADLGVKEPGFSEPWAEILRPENVLVFIDTAHRHDKWERQRRGSESRENPLEAKIVATI 535
Query: 512 AKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISM 571
+LI+ GV IG+ITPY Q L+ + +D +EV TVDG+QGREKE II+S+
Sbjct: 536 VGKLIEMGVKPEWIGVITPYDDQRDLISLNVPED-----VEVKTVDGYQGREKEVIILSL 590
Query: 572 VRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
VRSN + E+GFL D RR+NV++TRA+R+ +V D+ T+SS KRL+E+ +E + +
Sbjct: 591 VRSNERGEIGFLRDLRRLNVSLTRAKRKLIIVGDSATLSSHPTYKRLVEFVKEKGKLVDA 650
Query: 632 SE 633
E
Sbjct: 651 RE 652
>gi|308809071|ref|XP_003081845.1| DNA-binding protein, putative (ISS) [Ostreococcus tauri]
gi|116060312|emb|CAL55648.1| DNA-binding protein, putative (ISS) [Ostreococcus tauri]
Length = 781
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 250/737 (33%), Positives = 372/737 (50%), Gaps = 122/737 (16%)
Query: 19 VSVMAPLIDLEKEAEISASIT----SGASRNLD--TAQKKGSTILNLKCVDAQTGLMGKT 72
V V L+D+E+ E+++S + +G + + D + ++ L+ V A G G+
Sbjct: 39 VDVGQELLDIERACELASSSSMDEFNGEASDFDEESLAEREMRASGLRLVGATRGGDGRA 98
Query: 73 LLEFQSTKGDVLPAHKFGTHDVVVLK-----------------------PNKADLG--SP 107
LL ++T G +P + D V + P +A +
Sbjct: 99 LLVLRATDGKDIPVNALTVGDRVTISAVGFVSGSYDADEATQERLGDIAPAQATVRFMGD 158
Query: 108 ALGQGVVYRLKDS-SITVAFDDIPEEGLNSPLR-----LEKLANEVTYRRMKDALIQLSK 161
ALG+ + R D+ SIT+ ++ E L + L L + +E TY R + AL L+
Sbjct: 159 ALGKDAIGRYGDAGSITLEYEG-DERALATSLSGLEVCLSRAPDETTYERQRRALNILAS 217
Query: 162 --GVQNG-PA-AGLIPVLFGEQKPTVLKKDIAFKPFNS---------------------- 195
V+ PA A ++ +F E +PT+ + F +
Sbjct: 218 IPAVKRSKPACARIVRTIFHENRPTLWRDARGFDGGDGVHVEAVAAESLSRVERRSVTGV 277
Query: 196 NLDHSQKDAISKALSSKN-VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVD 254
D+SQ A+ A + K V + GPPGTGKT V+E+I Q RG ++LACA SN+AVD
Sbjct: 278 TFDNSQILALRAASTKKYPVVCVQGPPGTGKTAVVIEMIAQACARGERVLACAPSNLAVD 337
Query: 255 NIVERLVP-HRVRLVRLGHPARLLPQVLESALDAQVL----------RGDNSSLASDIRK 303
N+VERL VR VR G P R+ L ++DA+V R D+S ++ +R+
Sbjct: 338 NLVERLDGIDAVRAVRFGAPERISAAALSCSIDAKVAEATEAYFQKQRVDSSETSATLRE 397
Query: 304 EM----KALN-GKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLT 358
M KA N +K K + +++L+++ K ++ A T +++ A+VVLTT
Sbjct: 398 LMERYQKATNVPSAVKEKLQGEIEATKRKLKSIVGGGTKHRKAAQTKIVREANVVLTTNA 457
Query: 359 GAVSRKLDN-TSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKK 417
GA L FDLV+IDEAAQA E WI L++G R IL GD QL P + S EA +
Sbjct: 458 GAGLDALQTLPPFDLVVIDEAAQASEPLSWIPLVRGKRAILIGDPCQLAPVILSREAIEA 517
Query: 418 GLGRTLFERLAD------LYGDE---------VTSMLTVQYRMHEHIMNWSSKQLYNSKI 462
GL R+L RL L DE +T L+ QYR HE I +WSSK+ Y ++
Sbjct: 518 GLARSLMSRLMPSAETLPLRDDESSARVSDGILTLTLSTQYRSHEAISSWSSKEAYAGRL 577
Query: 463 KAHPS----------GVKRTSSTEPTLLLIDIAG------CDMEEKKDEEDSTMNEGEAE 506
+A S GV+ T T +L+I + E++ S +NEGEA+
Sbjct: 578 RAADSVRGALLRDLPGVQDTVLTRTPMLMITTRSPQGRIPSEYSERR-VGGSYINEGEAK 636
Query: 507 VAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRS------KDDKLKNMEVSTVDGFQ 560
AMAH K L+++GV A DI +I+PYAAQV LL+ + + DD++ ++VS+VD FQ
Sbjct: 637 TAMAHVKMLLKAGVRAKDIVVISPYAAQVRLLRSMIAVTLEDFADDRV--VDVSSVDSFQ 694
Query: 561 GREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
GRE E +IIS VRSN VGFLSD RRMNVAVTR +RQ ++ D +T+ SD FL+RL+
Sbjct: 695 GREAECVIISTVRSNGAGRVGFLSDSRRMNVAVTRGKRQVAIIGDDQTIKSDDFLRRLVH 754
Query: 621 YFEEHAEYLSGSEYLNE 637
+ E ++ +E ++
Sbjct: 755 HIESAGLFIPQAELFSQ 771
>gi|170288736|ref|YP_001738974.1| DNA helicase [Thermotoga sp. RQ2]
gi|170176239|gb|ACB09291.1| DNA helicase [Thermotoga sp. RQ2]
Length = 650
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 235/682 (34%), Positives = 365/682 (53%), Gaps = 99/682 (14%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNL--KCVDAQTGLMG 70
+++Q+F+ + L++LE+ AEI+A + + +KKG +L L K + + G
Sbjct: 1 MTVQQFIKKLVRLVELERNAEINAMFDEMKRLSGEEREKKGRAVLGLTGKFIGEELGYF- 59
Query: 71 KTLLEF-QSTKGDVLPAHKFGTHDVVVL---KPNKADLGSPALGQGVVYRLKDSSITVAF 126
L+ F + K D + G D+V++ P K+D + +G + ITVA
Sbjct: 60 --LVRFGRRKKIDT----EIGVGDLVLISKGNPLKSDYTGTVVEKG------ERFITVAV 107
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
D +P L + +R++ A+++T+RR + L+ LS G A + L G++KP +
Sbjct: 108 DRLPSWKLKN-VRIDLFASDITFRRQIENLMTLS---PEGKKA--LEFLLGKRKPEESFE 161
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILAC 246
+ F PF+ L+ SQ++A+S AL S + F++HGP GTGKT T+VE I QEV RG KIL
Sbjct: 162 E-EFTPFDEGLNESQREAVSLALGSSDFFLIHGPFGTGKTRTLVEYIRQEVARGKKILVT 220
Query: 247 AASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
A SN+AVDN+VERL +V LVR+GHP+R+ + ES L Q+ + SS ++K MK
Sbjct: 221 AESNLAVDNLVERLW-GKVSLVRIGHPSRVSSHLKESTLAHQI---ETSSEYEKVKK-MK 275
Query: 307 ALNGKLLKTKDKNT------RR-----------EIQKELRTLSKEE-------------- 335
KL++ +D T RR E R +SKE+
Sbjct: 276 EELAKLIEKRDSFTKPSPQWRRGLSDKKILEYAEKNWSARGVSKEKIKEMAEWIKLNSQI 335
Query: 336 -------RKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWI 388
+++++ +++ A VVL+T + A + FD+V++DEA+QA + I
Sbjct: 336 QDIRDLIERKEEIIANRIVREAQVVLSTNSSAALEIISGIVFDVVVVDEASQATIPSILI 395
Query: 389 ALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEH 448
+ KG + +LAGDH QLPPT+ S +A K L RTLFE L Y E +S+L QYRM+E
Sbjct: 396 PISKGKKFVLAGDHKQLPPTILSEDA--KDLSRTLFEELITRY-PEKSSLLDTQYRMNEL 452
Query: 449 IMNWSSKQLYNSKIKAHPS---------GVKRTS---------STEPTLLLIDIAGCD-- 488
+M + S++ Y+ K+KA GV+ + S + L+ ID
Sbjct: 453 LMAFPSEEFYDGKLKAAEEVRNITLFDLGVEIPNFGKFWDVVLSPKNVLVFIDTKNRSDR 512
Query: 489 MEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK-ILRSKDDK 547
E ++ + S N EA++ ++L+ GV IGIITPY QV L++ ++ +K
Sbjct: 513 FERQRKDSPSRENPLEAQIVKEVVEKLLSMGVKEDWIGIITPYDDQVNLIRELIEAK--- 569
Query: 548 LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTE 607
+EV +VDGFQGREKE IIIS VRSN E+GFL D RR+NV++TRA+R+ D+
Sbjct: 570 ---VEVHSVDGFQGREKEVIIISFVRSNKNGEIGFLEDLRRLNVSLTRAKRKLIATGDSS 626
Query: 608 TVSSDGFLKRLIEYFEEHAEYL 629
T+S +R +E+ ++ Y+
Sbjct: 627 TLSVHPTYRRFVEFVKKKGTYV 648
>gi|375146785|ref|YP_005009226.1| ATPase AAA [Niastella koreensis GR20-10]
gi|361060831|gb|AEV99822.1| ATPase AAA [Niastella koreensis GR20-10]
Length = 633
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 202/571 (35%), Positives = 315/571 (55%), Gaps = 36/571 (6%)
Query: 84 LPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKL 143
+PA F HD + NK + G+ G RLK IT+ D++P+ + L ++ L
Sbjct: 77 MPALLFSNHDA---ESNKVE-GTITFVNG--NRLK---ITLRTDELPDWASDGKLGIDLL 127
Query: 144 ANEVTYRRMKDALIQLSKGVQNGPAAG-LIPVLFGEQKPTVLKK-DIAFKPFNSNLDHSQ 201
+E +Y M++A +L+ + PA G LI +L G + P+ +A SNL+ SQ
Sbjct: 128 FDENSYDEMQNA-CKLAASLAEKPAEGRLIQILTGNKAPSFENSAPVAV----SNLNSSQ 182
Query: 202 KDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSKILACAASNIAVDNIVERL 260
+ A++K L + ++ ++HGPPGTGKTTT+V+ I +K+ +IL A SN AVD + E+L
Sbjct: 183 QAAVNKILQANDLAIVHGPPGTGKTTTLVQAIKAMIKKDNQQILVVAPSNTAVDLLSEKL 242
Query: 261 VPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK---- 316
+ ++R+G+PAR+ ++L LD ++ ++ ++K+ A K K
Sbjct: 243 SDEGLNVLRVGNPARVSERLLSLTLDYKMADHPHTKEIKRLKKQASAFMDMAHKYKRHFG 302
Query: 317 --DKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVI 374
+++ R+ + E R + KE +Q + D++ A V+ TL G+ + N F+ V+
Sbjct: 303 KAERDQRKALFAEARNIMKEVDNSEQYIIKDLVAKAQVITATLLGSNHYTVRNLKFNTVV 362
Query: 375 IDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDE 434
IDEA QALE ACW+ +LK + +LAGDH QLPPTV+S EA + GL TL E+ L+ E
Sbjct: 363 IDEAGQALEPACWVPILKAQKVVLAGDHCQLPPTVKSAEAAQNGLATTLLEKCVALHP-E 421
Query: 435 VTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT-SSTEPTLLLIDIAGCDMEEKK 493
+L QYRMHE IM +SS Y+ ++KAH S + S + L+ +D AGC +EK
Sbjct: 422 AEVLLEEQYRMHEMIMGYSSSTFYDDRLKAHASVARHVLFSNDNPLVFVDTAGCGFDEKT 481
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQS------GVHASDIGIITPYAAQVVLLKILRSKDDK 547
E+ ST N EA H +L+ S + I II+PY Q+ LK
Sbjct: 482 -EQTSTYNPEEAAFLFRHLTQLVSSLDSHYKPENFPSIAIISPYKQQIDTLKQQFLSSPA 540
Query: 548 LK----NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLV 603
L+ + ++T+D FQG+E++ + ISM RSN +GFLSD RRMNVA+TRAR++ ++
Sbjct: 541 LQAYGHKIAINTIDSFQGQERDIVYISMTRSNPDNRIGFLSDIRRMNVAMTRARKKLVVI 600
Query: 604 CDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
D+ T+S F I + ++ Y S E+
Sbjct: 601 GDSATLSQFDFYNNFISWAQDRNAYQSAWEF 631
>gi|11498984|ref|NP_070217.1| DNA helicase [Archaeoglobus fulgidus DSM 4304]
gi|2649188|gb|AAB89860.1| DNA helicase, putative [Archaeoglobus fulgidus DSM 4304]
Length = 648
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 231/671 (34%), Positives = 363/671 (54%), Gaps = 93/671 (13%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNL--KCVDAQTGLMGKT 72
++EF+ + L ++E++A+ISA + + + ++KG +L L K V + G
Sbjct: 1 MKEFIEGLIRLTEVERDAQISAMMDEIRRLSGEKRERKGRAVLGLRGKVVGEELGF---K 57
Query: 73 LLEFQSTKGDVLPAHKFGTHDVVVLK---PNKADLGSPALGQGVVYRLKDSSITVAFDDI 129
L+ + K + D V++ P K+DL +GVV +TV+ + +
Sbjct: 58 LVRYGRRKA---IETEISVGDEVLISRGDPLKSDL------RGVVVEKGSRYLTVSLESV 108
Query: 130 PEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIA 189
PE L +R++ A+++T++R + L L+ +NG A + G ++P+ + +
Sbjct: 109 PEWALRD-VRIDLYASDLTFKRWIENLENLT---ENGKRA--LKFALGLEEPSKTECE-D 161
Query: 190 FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAAS 249
FKPF+S+L+ +Q A+ A+S+ + F++HGP GTGKT TVVE++ Q VKRG ++L A S
Sbjct: 162 FKPFDSSLNRAQLKAVGCAVSTDDFFLIHGPFGTGKTRTVVEVVRQLVKRGERVLVTAES 221
Query: 250 NIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALN 309
N AVDN+VE L +++VRLGHP+R+ ++ E L + VL + +I+ +++ +
Sbjct: 222 NTAVDNLVELL--SDMKIVRLGHPSRVEKRLKEHTLASLVLNHPDYKRIEEIKGKIEEIE 279
Query: 310 GKL--LKTKDKNTRR--------------------------------EIQKELRTLSKEE 335
++ L RR E +K L L E
Sbjct: 280 RRMERLTKPSPQLRRGLSDEEILRLARSNRGARGVAAKKIRSMAEWIEARKALDQLYTEM 339
Query: 336 RKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR 395
++ ++ V ++I+ +DVV++T + A L SFD +IDEA+QA + I + + +
Sbjct: 340 KEEEERIVKEIIEESDVVISTNSSAF---LLEESFDTAVIDEASQATIPSVLIPINRARK 396
Query: 396 CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSK 455
ILAGDH QLPPTV ++AEK L TLFE+L +LY E + +L VQYRM+E +M + S+
Sbjct: 397 FILAGDHRQLPPTV--MKAEK--LSETLFEKLIELY-PEKSQLLNVQYRMNEKLMEFPSR 451
Query: 456 QLYNSKIKAHPS---------------GVKRTSSTEPTLLLIDIAGCD--MEEKKDEEDS 498
+ Y +I AH S ++ EP L+ ID + C E K + S
Sbjct: 452 EFYGGRIVAHESCTAIALSQIAKREAEKLREILGDEP-LVFIDTSKCKNRWEGKLADSTS 510
Query: 499 TMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDG 558
N EAE+ L++ G+ IG+ITPY QV L LR K D +EVS+VDG
Sbjct: 511 RYNRLEAEIVTEIVTELLKMGLKKEQIGVITPYDDQVDL---LREKVD----VEVSSVDG 563
Query: 559 FQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRL 618
FQGREKE IIIS VRSN K+E+GFL D RR+NV++TRARR+ +V D+ET+S +G RL
Sbjct: 564 FQGREKEVIIISFVRSNRKREIGFLDDLRRLNVSLTRARRKLIMVGDSETLSVNGTYARL 623
Query: 619 IEYFEEHAEYL 629
I++ + Y+
Sbjct: 624 IDHVKRKGVYV 634
>gi|388583947|gb|EIM24248.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 539
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 190/534 (35%), Positives = 288/534 (53%), Gaps = 84/534 (15%)
Query: 175 LFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIIL 234
+FG +KPT ++ + + ++ L+ SQ+DA++ AL + ++ ++HGPPGTGK+ T++EII
Sbjct: 4 IFGLRKPTFFQESPS-EYLDNTLNQSQRDAVNLALKADHLALIHGPPGTGKSYTLIEIIR 62
Query: 235 QEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDN 294
Q + + +IL C +SN+AVDNI+ERL + + + RLGHPAR+L + L+ Q
Sbjct: 63 QLINQDKRILVCGSSNLAVDNILERLSVYNIPVTRLGHPARILNNLQTQTLEYQTSHSHQ 122
Query: 295 SSLASDIRKEMKALNGKLL--KTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADV 352
+ + D++KE++ L L + K K R+ E++ L KE RKR + ++ A V
Sbjct: 123 NEIVKDVKKELEDLMKDLKDGRIKGKLKRKNAWNEVKELRKEHRKRSIGVLNSLMTRAKV 182
Query: 353 VLTTLTGAVSRKLDNT-SFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
VL TL GA R+L + FD+ +IDE+ QALE +C I +LK + ILAGD LQLPPTV +
Sbjct: 183 VLCTLHGAGGRQLQHQKEFDVCVIDESTQALEPSCLIPVLKAKKLILAGDPLQLPPTVLA 242
Query: 412 VEAEK----------------------------------------------------KGL 419
+K K L
Sbjct: 243 RPGQKKKERMKIIPKEPKTKKEKEISDKLAEVNISEHGNAASKISRVAPTQPTLKPLKSL 302
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT- 478
+LFERL ++G+ + +L+VQYRMH+ IM + S+ +YNSK+ A+ + KRT P
Sbjct: 303 EESLFERLIGIHGNSIKCLLSVQYRMHDMIMKYPSEAMYNSKLTAYEAVSKRTLMELPNV 362
Query: 479 ---------------LLLIDIAGCDMEEKKD---------EEDSTMNEGEAEVAMAHAKR 514
L+ ID G D E+ D EE S NE E E+ +
Sbjct: 363 VDNDTEKDEVELSSPLVFIDTDGYDFFERIDSEEMKKGAVEEGSKYNENEVEIIKRKVQD 422
Query: 515 LIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRS 574
L+ +GV S I IITPY AQV L + + E+ +VDG QGRE+E +I+S+VRS
Sbjct: 423 LVHAGVRDSQIAIITPYQAQVGHLN--NAVKPQFPGCEIGSVDGVQGREQEVVIMSLVRS 480
Query: 575 NSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS-SDGFLKRLIEYFEEHAE 627
N EVGFL + RR+NVA+TRA+RQ +V ++ T+ +LK+ +++ E +A+
Sbjct: 481 NETGEVGFLKEERRLNVAMTRAKRQLIIVGNSATIKRGSNYLKKWMDFLESNAD 534
>gi|403253185|ref|ZP_10919488.1| DNA helicase [Thermotoga sp. EMP]
gi|402811449|gb|EJX25935.1| DNA helicase [Thermotoga sp. EMP]
Length = 650
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 233/682 (34%), Positives = 364/682 (53%), Gaps = 99/682 (14%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNL--KCVDAQTGLMG 70
+++Q+F+ + L++LE+ AEI+A + + +KKG +L L K + + G
Sbjct: 1 MTVQQFIKKLVRLVELERNAEINAMFDEMKRLSGEEREKKGRAVLGLTGKFIGEELGYF- 59
Query: 71 KTLLEF-QSTKGDVLPAHKFGTHDVVVL---KPNKADLGSPALGQGVVYRLKDSSITVAF 126
L+ F + K D + G D+V++ P K+D + +G + ITVA
Sbjct: 60 --LVRFGRRKKIDT----EIGVGDLVLISKGNPLKSDYTGTVVEKG------ERFITVAV 107
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
D +P L + +R++ A+++T+RR + L+ LS G A + L G +KP +
Sbjct: 108 DRLPSWKLKN-VRIDLFASDITFRRQIENLMTLS---PEGKKA--LEFLLGRRKPEESFE 161
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILAC 246
+ F PF+ L+ SQ++A+S AL S + F++HGP GTGKT T+VE + QE RG KIL
Sbjct: 162 E-EFTPFDEGLNESQREAVSLALGSSDFFLIHGPFGTGKTRTLVEYVRQEAARGRKILVT 220
Query: 247 AASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
A SN+AVDN+VERL +V LVR+GHP+R+ + ES L Q+ + SS ++K MK
Sbjct: 221 AESNLAVDNLVERLW-GKVSLVRIGHPSRVSSHLKESTLAHQI---ETSSEYEKVKK-MK 275
Query: 307 ALNGKLLKTKDKNT------RR-----------EIQKELRTLSKEE-------------- 335
KL++ +D T RR E R +SKE+
Sbjct: 276 EELAKLIEKRDSFTKPSPQWRRGLSDKKILEYAEKNWSARGVSKEKIKEMAEWIKLNNQI 335
Query: 336 -------RKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWI 388
+++++ +++ A VVL+T + A + FD+V++DEA+QA + I
Sbjct: 336 QDIRELIERKEEIIANRIVREAQVVLSTNSSAALEIISGIVFDVVVVDEASQATIPSILI 395
Query: 389 ALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEH 448
+ KG + +LAGDH QLPPT+ S +A K L RTLFE L + Y E +S+L QYRM+E
Sbjct: 396 PISKGKKFVLAGDHKQLPPTILSEDA--KDLSRTLFEELINRY-PEKSSLLDTQYRMNEL 452
Query: 449 IMNWSSKQLYNSKIKAHPS---------GVKRTS---------STEPTLLLIDIAGCD-- 488
+M + S++ Y+ K+KA GV+ + S + L+ ID
Sbjct: 453 LMEFPSEEFYDGKLKAAEEVKNITLFDLGVEIPNFGKFWDVVLSPKNVLVFIDTKNRPDR 512
Query: 489 MEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK-ILRSKDDK 547
E ++ + S N EA++ ++L+ GV IGIITPY QV L++ ++ +K
Sbjct: 513 FERQRKDSPSRENPLEAQIVKEVVEKLLSMGVKEDWIGIITPYDDQVNLIRELIEAK--- 569
Query: 548 LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTE 607
+EV +VDGFQGREKE IIIS VRSN E+GFL D RR+NV++TRA+R+ D+
Sbjct: 570 ---VEVHSVDGFQGREKEVIIISFVRSNKNGEIGFLEDLRRLNVSLTRAKRKLIATGDSS 626
Query: 608 TVSSDGFLKRLIEYFEEHAEYL 629
T+S +R +E+ ++ Y+
Sbjct: 627 TLSVHPTYRRFVEFVKKKGTYV 648
>gi|223478666|ref|YP_002583052.1| DNA helicase [Thermococcus sp. AM4]
gi|214033892|gb|EEB74718.1| DNA helicase [Thermococcus sp. AM4]
Length = 660
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 229/678 (33%), Positives = 365/678 (53%), Gaps = 94/678 (13%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNL--KCVDAQTGLMGKT 72
L +F++ + LI++E++AEI A + +K G +L L K + + G
Sbjct: 7 LSKFIAKLKVLIEMERKAEIEAMRAEMKRLSGREREKVGRAVLGLNGKVIGEELGYFLVK 66
Query: 73 LLEFQSTKGDVLPAHKFGTHDVVVLK---PNKADLGSPALGQGVVYRLKDSSITVAFDDI 129
+ K ++ D+VV+ P K+DL + +G + ITVA + +
Sbjct: 67 YGREREIKTEI------SVGDLVVISKRDPLKSDLVGTVVEKGKRF------ITVALETV 114
Query: 130 PEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIA 189
PE L + +R++ AN++T++R + L L ++G A + G +K +++
Sbjct: 115 PEWALKN-VRIDLYANDITFKRWLENLENLR---ESGRKA--LEFYLGLRKHEE-GEEVE 167
Query: 190 FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAAS 249
F PF+ +L+ SQ+ AI+KAL S + F++HGP GTGKT T+VE+I QEV RG ++LA A S
Sbjct: 168 FTPFDKSLNASQRRAIAKALGSPDFFLIHGPFGTGKTRTLVELIRQEVARGHRVLATAES 227
Query: 250 NIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALN 309
N+AVDN+VERLV +++VR+GHP+R+ ++ E+ L A ++ L ++R E++ +
Sbjct: 228 NVAVDNLVERLVDSGLKVVRVGHPSRVSKKLHETTL-AYLM--TQHELYGELR-ELRVIG 283
Query: 310 GKLLKTKDKNTR--------------------------------RE------IQKELRTL 331
L + +D T+ RE I ++++
Sbjct: 284 ENLKEKRDTFTKPAPKYRRGLTDRQILRLAEKGIGTRGVSARLIREMAQWLKINEQVQKT 343
Query: 332 SKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL 391
+ RK ++ ++I+ ADVVLTT + A +D S+D+ +IDEA QA + I +
Sbjct: 344 FDDARKLEERIAREIIREADVVLTTNSSAGLEVVDYGSYDVAVIDEATQATIPSVLIPIN 403
Query: 392 KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN 451
+ R +LAGDH QLPPT+ S +A K L +TLFE L + Y + + MLTVQYRM+E +M
Sbjct: 404 RARRFVLAGDHRQLPPTILSEKA--KELSKTLFEGLIERYPGK-SEMLTVQYRMNERLME 460
Query: 452 WSSKQLYNSKIKAHPS---------GVK---------RTSSTEPTLLLIDIAGCD--MEE 491
+ S++ Y+ +I+A S GVK + E L+ ID AG + E
Sbjct: 461 FPSREFYDGRIEADESVRGITLADLGVKSPEEGDAWAKVLKPENVLVFIDTAGREDRFER 520
Query: 492 KKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNM 551
++ +S N EA + + L+ GV IG+I+PY Q L+ L ++ +
Sbjct: 521 QRYGSESRENPLEARLVKEAVEGLLSLGVKPEWIGVISPYDDQRDLISSLLPEE-----I 575
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
EV TVDG+QGREKE I++S VRSN K E+GFL D RR+NV++TRA+R+ L+ D+ T+SS
Sbjct: 576 EVKTVDGYQGREKEVIVLSFVRSNRKGELGFLKDLRRLNVSLTRAKRKLILIGDSSTLSS 635
Query: 612 DGFLKRLIEYFEEHAEYL 629
KRL+E+ E Y+
Sbjct: 636 HPTYKRLVEFVRERETYV 653
>gi|341582257|ref|YP_004762749.1| DNA helicase [Thermococcus sp. 4557]
gi|340809915|gb|AEK73072.1| DNA helicase, putative [Thermococcus sp. 4557]
Length = 710
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 227/673 (33%), Positives = 367/673 (54%), Gaps = 92/673 (13%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
L++F+S + L+++E++AEI A + +K G +L L ++G+ L
Sbjct: 5 LEKFISHLKVLVEMERKAEIEAMRLEMKRLSGREREKVGRAVLGLNG-----KVVGEELG 59
Query: 75 EFQSTKG-DVLPAHKFGTHDVVVLK---PNKADLGSPALGQGVVYRLKDSSITVAFDDIP 130
F G D + D+VV+ P K+DL + +G + ITVA + +P
Sbjct: 60 YFLVKYGRDREIKTEISVGDLVVVSRRDPLKSDLVGTVVEKGKRF------ITVALETVP 113
Query: 131 EEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAF 190
E L +R++ AN++T++R + L L ++G A + + G ++P + + F
Sbjct: 114 EWALKG-VRIDLYANDITFKRWLENLEALR---ESGRKA--LELHLGLREPEE-SEALEF 166
Query: 191 KPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASN 250
PF+ +L+ SQ+ A++KAL S + F++HGP GTGKT T+ E+I QEV+RG+++LA A SN
Sbjct: 167 TPFDRSLNASQRRAVAKALGSPDFFLIHGPFGTGKTRTLAELIRQEVERGNRVLATAESN 226
Query: 251 IAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG 310
+AVDN+VERLV +++VR+GHP+R+ + E+ L + R + L ++R E++ +
Sbjct: 227 VAVDNLVERLVDSGLKVVRVGHPSRVSRSLHETTLAYLITRHE---LYGELR-ELRVIGQ 282
Query: 311 KLLKTKDKNTR--------------------------------RE------IQKELRTLS 332
L + +D T+ RE I ++++
Sbjct: 283 NLAEKRDTFTKPSPKYRRGLSDKEILRLASKGIGTRGVPARLIREMAEWIKINRQVQKTF 342
Query: 333 KEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLK 392
+ RK ++ ++I+ ADVVLTT + A +D S+D+ IIDEA QA + I + +
Sbjct: 343 DDARKLEERIAREIIREADVVLTTNSSAGLDVVDYGSYDVAIIDEATQATIPSVLIPINR 402
Query: 393 GSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNW 452
R +LAGDH QLPPT+ S +A K LG TLFE L + Y + + MLTVQYRM+E +M +
Sbjct: 403 AKRFVLAGDHKQLPPTILSEKA--KELGNTLFEGLIERYPGK-SEMLTVQYRMNERLMEF 459
Query: 453 SSKQLYNSKIKAHPS---------GVKRTS---------STEPTLLLIDIAGCD--MEEK 492
S++ Y +I+A S GVK + E L+ +D +G + E +
Sbjct: 460 PSREFYGGRIEADESIRAITLADLGVKSPACDGLWNEVLRPENVLVFVDTSGREDRFERQ 519
Query: 493 KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNME 552
+ +S N EA + ++L++ G++ IG+ITPY Q L++ L ++ +E
Sbjct: 520 RYGSESRENPLEARLVKEVVEKLLELGLNPEWIGVITPYDDQRDLIRSLLPEE-----VE 574
Query: 553 VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSD 612
V TVDG+QGREKE I++S VRSN K E+GFL D RR+NV++TRA+R+ L+ D+ T+S
Sbjct: 575 VKTVDGYQGREKEVIVLSFVRSNRKGELGFLKDLRRLNVSLTRAKRKLILIGDSSTLSVH 634
Query: 613 GFLKRLIEYFEEH 625
KRL+E+ E
Sbjct: 635 PTYKRLVEFVSER 647
>gi|395218587|ref|ZP_10402229.1| ATPase AAA [Pontibacter sp. BAB1700]
gi|394454278|gb|EJF08968.1| ATPase AAA [Pontibacter sp. BAB1700]
Length = 645
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 207/603 (34%), Positives = 320/603 (53%), Gaps = 51/603 (8%)
Query: 65 QTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITV 124
+ G K ++E + T D H F L N D S + GVV +K + + +
Sbjct: 54 EIGFGNKVVIELERT-SDRDQLHLFQPGKTASLFINNGDKSSLS---GVVLGVKRNKVIL 109
Query: 125 AFD--DIPEEGLNSPLRLEKLANEVTYRRMKDAL--IQLSKGVQNGP----AAGLIPVLF 176
A + D+P+ + +E +E++YR M+ AL +Q + G + G+ P F
Sbjct: 110 ATNKEDLPDWVGTGRMGIELTFDEISYREMEIALKKVQEANGTRLAELRDIMLGVKPATF 169
Query: 177 GEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQE 236
++K ++ L+ SQ +A+ K +++V ++HGPPGTGKTTT+V+ IL
Sbjct: 170 TDEKLEEIQV----------LNESQNEAVQKIAQARDVAIIHGPPGTGKTTTLVQAILHT 219
Query: 237 VKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSS 296
+K ++L A SN AVD + E+L V ++R+G+P+R+ +LE LDAQV+
Sbjct: 220 LKSQKRLLVTAPSNTAVDLLTEKLANEGVNVIRIGNPSRVSDVLLEHTLDAQVMAHRAYK 279
Query: 297 LASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKR--------QQLAVTDVIK 348
++RK + + K K +E + R L K E R + D++
Sbjct: 280 DLKNLRKTAEEYKRMAYQFKRKFGHQE--RAQRQLYKSESHRLLDEADNVEHYITDDLLD 337
Query: 349 NADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPT 408
N V+ TL GA ++ + + ++D V IDEAAQALE ACWI + + +R +LAGDH QLPPT
Sbjct: 338 NVQVITCTLVGAANKAIRHLTYDTVFIDEAAQALEPACWIPISRTNRVVLAGDHCQLPPT 397
Query: 409 VQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS- 467
++S+ A+K GL TLFE+ + EV+ ML QYRMH HIM +S++Q Y ++ AH S
Sbjct: 398 IKSLVADKGGLSVTLFEKCIN-RQPEVSVMLKTQYRMHHHIMQFSNQQFYGGELVAHESV 456
Query: 468 ------GVKRTSSTEPTLLLIDIAGCDMEEKK-DEEDSTMNEGEAEVAMAHAKRLI---- 516
G + + + ID AGC E + E S+ N E ++ + H L+
Sbjct: 457 HSAELHGYSTIFAPDMAVEFIDTAGCGYNEAEMPETQSSANPEEGDLLINHLSNLLKDYD 516
Query: 517 QSGVHASDIGIITPYAAQVVLLKILRSKDDKL------KNMEVSTVDGFQGREKEAIIIS 570
+ V IG+I PY AQ+ L+ +L + + + TVD FQG+E++ I +S
Sbjct: 517 EEEVAPLKIGVIAPYRAQINYLQDKVEHTPRLHELHQKRQLSIGTVDSFQGQERDIICMS 576
Query: 571 MVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLS 630
+VRSN + E+GFL+D RRMNVA+TRARR+ +V D+ T+S++ F LI Y E Y S
Sbjct: 577 LVRSNERGEIGFLADERRMNVAMTRARRKLIIVGDSSTLSTNPFFAELIAYVESIGAYKS 636
Query: 631 GSE 633
E
Sbjct: 637 AWE 639
>gi|401624864|gb|EJS42903.1| hcs1p [Saccharomyces arboricola H-6]
Length = 684
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 235/660 (35%), Positives = 357/660 (54%), Gaps = 92/660 (13%)
Query: 53 GSTILNLKCVDAQTGLMGKTLLEF--------QSTKGDVLPAHKFGTHDVVVLKPNKADL 104
G I N+ + ++GL+GK +E + +GD+ K G D+V+++P K
Sbjct: 40 GLAINNIHLENIRSGLIGKLYMELGPNLEINDKIQRGDI----KIG--DIVLIRPAKTKT 93
Query: 105 -----------GSPALGQ----GVVYRLKDSSITVAFDDIPEEGLNSPLRLEKL-----A 144
S GQ GV+Y++ D+ IT+A ++ E + KL
Sbjct: 94 KTKAKAKKVPEDSSEEGQVECSGVIYKMNDNQITIALEESQEVVATTFYSYNKLYILKTT 153
Query: 145 NEVTYRRMKDALIQLSKG---VQNGPAAGLIPVLFGEQK--PTVLKKDIAFKPFNSNLDH 199
N +TY+RM+ + +LS+ +Q+ +I L E+ P + A N NL+
Sbjct: 154 NTITYKRMESTMRKLSEFGSLIQDK----IIQYLTNERPFIPNTSQSQNAGFFQNPNLND 209
Query: 200 SQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG--SKILACAASNIAVDNIV 257
SQK AI+ A+++ ++ ++HGPPGTGKT T++E+I Q + + +IL C SNI+VD I+
Sbjct: 210 SQKTAINFAINN-DLTIIHGPPGTGKTFTLIELIQQLLTKQPEKRILICGPSNISVDTIL 268
Query: 258 ERL---VPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
ERL VP+ + L+R+GHPARLL +LD +L N+ + DI E+ L + K
Sbjct: 269 ERLTPLVPNNL-LLRIGHPARLLDSNKRHSLD--ILSKKNT-IVKDISHEIDKLIQENKK 324
Query: 315 TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKL--------D 366
K+ RRE E++ L K+ +KR+ + D+I + +V+TTL G+ SR+L D
Sbjct: 325 LKNYKQRRENWNEIKLLRKDLKKREFKTIKDLIIQSRIVVTTLHGSSSRELCSLYRDDPD 384
Query: 367 NTSFDLVIIDEAAQALEIACWIALL----KGSRCILAGDHLQLPPTVQSVEAEK--KGLG 420
FD +IIDE +QA+E CWI L+ + S+ IL GD+ QLPPT+++ + +K L
Sbjct: 385 FKLFDTLIIDEVSQAMEPQCWIPLIAHQNQFSKLILTGDNKQLPPTIKTEDDQKVIHNLE 444
Query: 421 RTLFERLADLYGD-EVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-------- 471
TLF+RL + E+ L VQYRM+E IM + S+ +Y+ K+ A + R
Sbjct: 445 TTLFDRLIKNFPKREMVKFLNVQYRMNEKIMEFPSQSMYHGKLLADVTVANRLLIDLPNV 504
Query: 472 ---------TSSTEPTLLLIDIAGCDMEEKKDEED---STMNEGEAEVAMAHAKRLIQSG 519
T+ L+ D G + E D S NEGE + H + L S
Sbjct: 505 DVTPFDDDDDVDTKLPLIWYDTQGDEFPETADGATILGSKYNEGEIAIVKEHIQSLRSSN 564
Query: 520 VHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKE 579
V IGII+PY+AQV +K L + KL ++E+STVDGFQGREK+ +I+S+VRSN K E
Sbjct: 565 VPQESIGIISPYSAQVSHMKRLIHDELKLTDIEISTVDGFQGREKDVVILSLVRSNEKFE 624
Query: 580 VGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG--FLKRLIEYFEEHAE--YLSGSEYL 635
VGFL + RR+NVA+TR RRQ +V + E + G +LK E+ EE+A+ Y + +YL
Sbjct: 625 VGFLKEERRLNVAMTRPRRQLVVVGNIEALQRCGNKYLKNWSEWCEENADVRYPNIDDYL 684
>gi|150007774|ref|YP_001302517.1| helicase [Parabacteroides distasonis ATCC 8503]
gi|149936198|gb|ABR42895.1| putative helicase [Parabacteroides distasonis ATCC 8503]
Length = 640
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 186/514 (36%), Positives = 296/514 (57%), Gaps = 24/514 (4%)
Query: 132 EGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK 191
+G ++ L ++ +E +Y+ M AL + + +N + L VL G++KP +
Sbjct: 127 QGKSNDLGVQLYFDETSYKTMFSALSDVMRA-KNNQLSHLRDVLLGQEKPGQRELFPIRF 185
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNI 251
P+ L+ SQ++A++K L +K V ++HGPPGTGKTTT+VE I + + R ++++ CA SN
Sbjct: 186 PW---LNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQVIVCAQSNT 242
Query: 252 AVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGK 311
AVD I E+LV + ++R+G+P R+ ++L + + + IRK ++ +
Sbjct: 243 AVDCISEKLVDRGINVLRIGNPTRINDKMLSFTYERRFESHPDYPELWSIRKAIRDIQSN 302
Query: 312 LLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+ K K + R I+ L L + + T++ A VV TL G+ +R + N F
Sbjct: 303 MRK-KSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRVMMNRHFT 361
Query: 372 LVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
+ IDEAAQALE ACWIA+ K R ILAGDH QLPPT++ +EAE++GLGRTL +++A
Sbjct: 362 TLFIDEAAQALEAACWIAISKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKIAHT- 420
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----GVKRTSSTEPTLLLIDIAGC 487
E S+L +QYRMHE IM +SS+ Y++++++ P G+ R + ++ D + C
Sbjct: 421 KPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDT---PIVWFDTSEC 477
Query: 488 DMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHAS------DIGIITPYAAQVVLLKI 540
D E EE S +N EAE+ + + IQ D G+I+PY AQV ++
Sbjct: 478 DFTENTREETMSRVNRQEAELLVEQLRSYIQKISKERVLEENIDFGLISPYKAQVQYIRK 537
Query: 541 LRSKDDKLKNME----VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
L +D K + V TVDGFQG+E++ I+IS+VR+N ++GFL+D RRMNVA+TRA
Sbjct: 538 LIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRMNVAITRA 597
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLS 630
R + ++ D T++ F K L Y + + ++
Sbjct: 598 RMKLMILGDASTLTRHAFYKELYNYISQRGKIIT 631
>gi|262381717|ref|ZP_06074855.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|423336431|ref|ZP_17314178.1| hypothetical protein HMPREF1059_00130 [Parabacteroides distasonis
CL09T03C24]
gi|262296894|gb|EEY84824.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|409240906|gb|EKN33680.1| hypothetical protein HMPREF1059_00130 [Parabacteroides distasonis
CL09T03C24]
Length = 640
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 186/514 (36%), Positives = 296/514 (57%), Gaps = 24/514 (4%)
Query: 132 EGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK 191
+G ++ L ++ +E +Y+ M AL + + +N + L VL G++KP +
Sbjct: 127 QGKSNDLGVQLYFDETSYKTMFSALSDVMRA-KNNQLSHLRDVLLGQEKPGQRELFPIRF 185
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNI 251
P+ L+ SQ++A++K L +K V ++HGPPGTGKTTT+VE I + + R ++++ CA SN
Sbjct: 186 PW---LNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQVIVCAQSNT 242
Query: 252 AVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGK 311
AVD I E+LV + ++R+G+P R+ ++L + + + IRK ++ +
Sbjct: 243 AVDCISEKLVDRGINVLRIGNPTRINDKMLSFTYERRFESHPDYPELWSIRKAVRDIQSN 302
Query: 312 LLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+ K K + R I+ L L + + T++ A VV TL G+ +R + N F
Sbjct: 303 MRK-KSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRIMMNRHFT 361
Query: 372 LVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
+ IDEAAQALE ACWIA+ K R ILAGDH QLPPT++ +EAE++GLGRTL +++A
Sbjct: 362 TLFIDEAAQALEAACWIAISKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKIAHA- 420
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----GVKRTSSTEPTLLLIDIAGC 487
E S+L +QYRMHE IM +SS+ Y++++++ P G+ R + ++ D + C
Sbjct: 421 KPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDT---PIVWFDTSEC 477
Query: 488 DMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHAS------DIGIITPYAAQVVLLKI 540
D E EE S +N EAE+ + + IQ D G+I+PY AQV ++
Sbjct: 478 DFTENTREETMSRVNRQEAELLVEQLRSYIQKISKERVLEENIDFGLISPYKAQVQYIRK 537
Query: 541 LRSKDDKLKNME----VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
L +D K + V TVDGFQG+E++ I+IS+VR+N ++GFL+D RRMNVA+TRA
Sbjct: 538 LIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRMNVAITRA 597
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLS 630
R + ++ D T++ F K L Y + + ++
Sbjct: 598 RMKLMILGDASTLTRHAFYKELYNYISQRGKIIT 631
>gi|423331731|ref|ZP_17309515.1| hypothetical protein HMPREF1075_01528 [Parabacteroides distasonis
CL03T12C09]
gi|409229572|gb|EKN22444.1| hypothetical protein HMPREF1075_01528 [Parabacteroides distasonis
CL03T12C09]
Length = 640
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 186/514 (36%), Positives = 296/514 (57%), Gaps = 24/514 (4%)
Query: 132 EGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK 191
+G ++ L ++ +E +Y+ M AL + + +N + L VL G++KP +
Sbjct: 127 QGKSNDLGVQLYFDETSYKTMFSALSDVMRA-KNNQLSHLRDVLLGQEKPGQRELFPIRF 185
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNI 251
P+ L+ SQ++A++K L +K V ++HGPPGTGKTTT+VE I + + R ++++ CA SN
Sbjct: 186 PW---LNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQVIVCAQSNT 242
Query: 252 AVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGK 311
AVD I E+LV + ++R+G+P R+ ++L + + + IRK ++ +
Sbjct: 243 AVDCISEKLVDRGINVLRIGNPTRINDKMLSFTYERRFESHPDYPELWSIRKAIRDIQSN 302
Query: 312 LLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+ K K + R I+ L L + + T++ A VV TL G+ +R + N F
Sbjct: 303 MRK-KSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRVMMNRHFT 361
Query: 372 LVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
+ IDEAAQALE ACWIA+ K R ILAGDH QLPPT++ +EAE++GLGRTL +++A
Sbjct: 362 TLFIDEAAQALEAACWIAIGKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKIAHT- 420
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----GVKRTSSTEPTLLLIDIAGC 487
E S+L +QYRMHE IM +SS+ Y++++++ P G+ R + ++ D + C
Sbjct: 421 KPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDT---PIVWFDTSEC 477
Query: 488 DMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHAS------DIGIITPYAAQVVLLKI 540
D E EE S +N EAE+ + + IQ D G+I+PY AQV ++
Sbjct: 478 DFTENTREETMSRVNRQEAELLVEQLRSYIQKISKERVLEENIDFGLISPYKAQVQYIRK 537
Query: 541 LRSKDDKLKNME----VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
L +D K + V TVDGFQG+E++ I+IS+VR+N ++GFL+D RRMNVA+TRA
Sbjct: 538 LIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRMNVAITRA 597
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLS 630
R + ++ D T++ F K L Y + + ++
Sbjct: 598 RMKLMILGDASTLTRHAFYKELYNYISQRGKIIT 631
>gi|298375719|ref|ZP_06985676.1| DNA helicase [Bacteroides sp. 3_1_19]
gi|298268219|gb|EFI09875.1| DNA helicase [Bacteroides sp. 3_1_19]
Length = 640
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 185/514 (35%), Positives = 296/514 (57%), Gaps = 24/514 (4%)
Query: 132 EGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK 191
+G ++ L ++ +E +Y+ M AL + + +N + L VL G++KP ++ F
Sbjct: 127 QGKSNDLGVQLYFDETSYKTMFSALSDVMRA-KNNQLSHLRDVLLGQEKP---RQRELFP 182
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNI 251
L+ SQ++A++K L +K V ++HGPPGTGKTTT+VE I + + R ++++ CA SN
Sbjct: 183 IRFPWLNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQVIVCAQSNT 242
Query: 252 AVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGK 311
AVD I E+LV + ++R+G+P R+ ++L + + + IRK ++ +
Sbjct: 243 AVDCISEKLVDRGINVLRIGNPTRINDKMLSFTYERRFESHPDYPELWSIRKAVRDIQSN 302
Query: 312 LLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+ K K + R I+ L L + + T++ A VV TL G+ +R + N F
Sbjct: 303 MRK-KSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRVMMNRHFT 361
Query: 372 LVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
+ IDEAAQALE ACWIA+ K R ILAGDH QLPPT++ +EAE++GLGRTL +++A
Sbjct: 362 TLFIDEAAQALEAACWIAIGKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKIAHT- 420
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----GVKRTSSTEPTLLLIDIAGC 487
E S+L +QYRMHE IM +SS+ Y++++++ P G+ R + ++ D + C
Sbjct: 421 KPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDT---PIVWFDTSEC 477
Query: 488 DMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHAS------DIGIITPYAAQVVLLKI 540
D E EE S +N EAE+ + ++ IQ D G+I+PY AQV ++
Sbjct: 478 DFTENTREETMSRVNRQEAELLVEQSRSYIQKISKERVLEENIDFGLISPYKAQVQYIRK 537
Query: 541 LRSKDDKLKNME----VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
L +D K + V TVDGFQG+E++ I+IS+VR+N ++GFL+D RRMNVA+TRA
Sbjct: 538 LIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRMNVAITRA 597
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLS 630
R + ++ D T++ F L Y + + ++
Sbjct: 598 RMKLMILGDASTLTRHAFYNELYNYISQRGKIIT 631
>gi|392964636|ref|ZP_10330056.1| AAA ATPase [Fibrisoma limi BUZ 3]
gi|387846019|emb|CCH52102.1| AAA ATPase [Fibrisoma limi BUZ 3]
Length = 632
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 201/570 (35%), Positives = 313/570 (54%), Gaps = 32/570 (5%)
Query: 84 LPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKL 143
+PA F HD K D + RLK +T+ D++P+ + L +E L
Sbjct: 77 MPAVLFSNHD------PKNDRAEGTISHQSGNRLK---LTLRVDELPDWSRDGKLGVELL 127
Query: 144 ANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKD 203
++ +Y M+ AL + + + LI +L GEQ PT + ++A L+ SQ
Sbjct: 128 FDDNSYDEMEQAL-KTASTLSRKSDHRLINILTGEQSPT-FRSEVAELSL-PQLNPSQVA 184
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVDNIVERLVP 262
A+ K S+ + ++HGPPGTGKTTT+V+ I +++ + K+L A SN AVD + ERL
Sbjct: 185 AVDKIRSANELAIVHGPPGTGKTTTIVQAIKALIRQANQKVLVVAPSNTAVDLLSERLHD 244
Query: 263 HRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK------ 316
+ ++R+G+PAR+ +++ LD +V A ++K+ K K
Sbjct: 245 QGLNVLRVGNPARVSERLMALTLDHKVNEHPYMKEAKKLKKQANEFRNMAHKYKRQFGKA 304
Query: 317 DKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIID 376
++ R+ + E + K+ +Q + D+I A V+ TL GA + N ++ V+ID
Sbjct: 305 EREQRKALFDEAHRIMKDVANSEQYVIDDLIARAQVITATLVGANHHTVRNLTYHTVVID 364
Query: 377 EAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT 436
EA QALE ACWI +LK + +LAGDH QLPPT++S EA ++GL TL E+ ++ E
Sbjct: 365 EAGQALEPACWIPILKAQKVVLAGDHCQLPPTIKSPEAARRGLSETLLEKCIAMHP-EAV 423
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT-SSTEPTLLLIDIAGCDMEEKKDE 495
S+L QYRMHEHIM +SS+ Y K+KAH S + T + +L+ +D AGC +EK D
Sbjct: 424 SLLDEQYRMHEHIMGYSSEVFYEKKLKAHASVARHTLFDGDTSLVFVDTAGCGFDEKLDG 483
Query: 496 EDSTMNEGEAEVAMAHAKRLI---QSGVHASD---IGIITPYAAQVVLLKILRSKDDKLK 549
ST N EA + + H +L+ + D I +I+PY Q+ +LK + +L+
Sbjct: 484 TSST-NPDEAALLVKHLTQLVADLSTYYKPQDFPTIAVISPYKQQIAILKEQIANTPELQ 542
Query: 550 N----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCD 605
+ V+T+D FQG+E++ + ISMVRSN+ ++GFL+D RRMNVA+TRAR++ +V D
Sbjct: 543 PYSHVISVNTIDSFQGQERDIVYISMVRSNADGDIGFLADIRRMNVAMTRARKKLVIVGD 602
Query: 606 TETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
+ T++ F I Y E Y S E+L
Sbjct: 603 SATLAGLPFYADFIAYAEALDTYQSAWEWL 632
>gi|385304861|gb|EIF48863.1| hexameric dna polymerase alpha-associated dna helicase a involved
in lagging strand dna synthesis [Dekkera bruxellensis
AWRI1499]
Length = 703
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 211/568 (37%), Positives = 315/568 (55%), Gaps = 88/568 (15%)
Query: 142 KLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQ 201
KL+NE+TY RM+ + +LS+ + ++ +L GE + + +K +NS L+ SQ
Sbjct: 127 KLSNEITYNRMESTMRKLSE-MSLSQETQIMQLLLGESQFSPVKSFKIDXYYNSGLNSSQ 185
Query: 202 KDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV--KRGS-----------KILACAA 248
K AI ++S+ N+ ++HGPPGTGKT+T+VE++ Q + KR S +IL C
Sbjct: 186 KKAIEFSMSN-NLSIIHGPPGTGKTSTIVELVKQLITFKRSSTASSVPGRTANRILICGP 244
Query: 249 SNIAVDNIVERLVPH------RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR 302
SNI+VD I+ERL +LVR+GHPAR+LPQ+L+ +LD V R ++ + S I
Sbjct: 245 SNISVDTILERLSDFISNNGGYDKLVRIGHPARILPQILKHSLDMIVER-NSHEVISGIM 303
Query: 303 KEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS 362
++M +L KL K K RRE+ +E++ L ++ R + +D I NA+VV+ TL G+ S
Sbjct: 304 EDMDSLTKKLRKVKHYKDRRELYQEMKDLKRDLRSSTRKGFSDSILNAEVVVATLHGSSS 363
Query: 363 RKLDNTS------FDLVIIDEAAQALEIACWIALLKGS---RCILAGDHLQLPPTVQSVE 413
++L N FD +IIDE +Q+LE +CWI L+ + I+AGD+ QL PT+++ +
Sbjct: 364 QQLVNCIRENGDLFDTLIIDEVSQSLEPSCWIPLIYHKSIKKJIIAGDNKQLSPTIKTKK 423
Query: 414 AEKKG--LGRTLFERLADLYG--DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS-- 467
+K L T+F+RL + + L VQYRM+E IM + S+ LYN ++ A S
Sbjct: 424 NKKVAKLLXTTMFDRLLKVQKRPENFVCFLNVQYRMNEKIMKFPSESLYNKRLVADSSVK 483
Query: 468 --------------GVKRTSST---------EPTLLLIDIAGCDMEEKKDEED-----ST 499
GV + EP ++ D G E D S
Sbjct: 484 DGIVKDLLNDRQATGVSGENPNDNDDEDDIKEP-IIWYDTEGGSFPEMSSNXDGSITPSR 542
Query: 500 MNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK-ILRS--------------- 543
N+GE V + H K L+ GVH +IGIITPY+AQV L+ + RS
Sbjct: 543 YNDGECLVVLKHVKSLLSRGVHQDEIGIITPYSAQVTKLRQLFRSGTLNFADDDDXDNEK 602
Query: 544 ----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 599
+ L +E+STVDGFQGREKE II+S+VRSN K VGFLSD +R+NV++TR ++Q
Sbjct: 603 KYIDEQSLLDKIEISTVDGFQGREKEIIILSLVRSNEKHNVGFLSDEKRLNVSITRCKKQ 662
Query: 600 CCLVCDTETV--SSDGFLKRLIEYFEEH 625
C+V D +T+ S FLK+ ++ E +
Sbjct: 663 LCVVGDFDTIGGSKIPFLKKWCDWCENN 690
>gi|301310190|ref|ZP_07216129.1| DNA helicase [Bacteroides sp. 20_3]
gi|300831764|gb|EFK62395.1| DNA helicase [Bacteroides sp. 20_3]
Length = 640
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 186/514 (36%), Positives = 296/514 (57%), Gaps = 24/514 (4%)
Query: 132 EGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK 191
+G ++ L ++ +E +Y+ M AL + + +N + L VL G++KP +
Sbjct: 127 QGKSNDLGVQLYFDETSYKTMFSALSDVMRA-KNNQLSHLRDVLLGQEKPGQRELFPIRF 185
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNI 251
P+ L+ SQ++A++K L +K V ++HGPPGTGKTTT+VE I + + R ++++ CA SN
Sbjct: 186 PW---LNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQVIVCAQSNT 242
Query: 252 AVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGK 311
AVD I E+LV + ++R+G+P R+ ++L + + + IRK ++ +
Sbjct: 243 AVDCISEKLVDRGINVLRIGNPTRINDKMLSFTYERRFESHPDYPELWSIRKAVRDIQSN 302
Query: 312 LLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+ K K + R I+ L L + + T++ A VV TL G+ +R + N F
Sbjct: 303 MRK-KSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRIMMNRHFT 361
Query: 372 LVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
+ IDEAAQALE ACWIA+ K R ILAGDH QLPPT++ +EAE++GLGRTL +++A
Sbjct: 362 TLFIDEAAQALEAACWIAISKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKIAHA- 420
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----GVKRTSSTEPTLLLIDIAGC 487
E S+L +QYRMHE IM +SS+ Y++++++ P G+ R + ++ D + C
Sbjct: 421 KPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDT---PIVWFDTSEC 477
Query: 488 DMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHAS------DIGIITPYAAQVVLLKI 540
D E EE S +N EAE+ + + IQ D G+I+PY AQV ++
Sbjct: 478 DFTENTREETMSRVNRQEAELLVEQLRSYIQKISKERVLEENIDFGLISPYKAQVQYIRK 537
Query: 541 LRSKDDKLKNME----VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
L +D K + V TVDGFQG+E++ I+IS+VR+N ++GFL+D RRMNVA+TRA
Sbjct: 538 LIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRMNVAITRA 597
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLS 630
R + ++ D T++ F K L Y + + ++
Sbjct: 598 RMKLMILGDASTLTRHAFYKELYNYISQRGKIIT 631
>gi|325294544|ref|YP_004281058.1| DNA helicase [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325064992|gb|ADY72999.1| DNA helicase [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 721
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 227/675 (33%), Positives = 360/675 (53%), Gaps = 79/675 (11%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKK--GSTILNLKCVDAQTGLMG 70
V++ +V LID+E+ AEI A R L +++ G IL+LK A T
Sbjct: 65 VTVHNYVEKFKYLIDIERIAEIEAQ--EAEIRKLSGRERELLGRAILDLKGTKAGTKFHL 122
Query: 71 KTLLEFQSTKGDVLPAH-KFGTHDVVVLKPNKADLGSPALGQ--GVVYRLKDSSITVAFD 127
L+ F K P + GT D+V++ G+P + G V R+ + ++TVAF+
Sbjct: 123 H-LVRFWREK----PIETEIGTGDIVLVSK-----GNPLKSELLGTVVRVTEKTMTVAFE 172
Query: 128 DIPEEGLNSP-LRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
+ P + +R++ N+VT++RM++ L + I + E + ++
Sbjct: 173 NRPPNWVYKKGVRVDLYVNDVTFKRMEENLEAFRHATKRQREIRNIIIGLKEPEKVEKEE 232
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILAC 246
+ L+ +Q +A+ +AL +K+ +++HGPPGTGKT+T+ E+I+Q VKRG+K+LA
Sbjct: 233 FEVV---DKRLNKTQINAVKQALGAKDFYLIHGPPGTGKTSTITELIVQLVKRGNKVLAT 289
Query: 247 AASNIAVDNIVERLVPH-RVRLVRLGHPARLLPQV---------------------LESA 284
A SNIA DNI+ L + ++LVR+GHPAR+L ++ E
Sbjct: 290 ADSNIAADNILLNLSKYSELKLVRIGHPARVLEELEKFSIYTLYEEHEKTQKIKEGWERV 349
Query: 285 LDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLS------------ 332
+ R + +R+ M K K+ R +K +R+++
Sbjct: 350 RELIEKREQFTKPLPHLRRGMSDDEIVFFGRKGKSFRGIPKKTMRSMANWILTNYEIDVR 409
Query: 333 -KEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL 391
K ++ + + + +I +ADVV++T + S L+ FD+ +IDE +Q +E + I ++
Sbjct: 410 IKALKEMESIVLRQIIASADVVISTNSMVKSELLEGFHFDVAVIDEGSQQVEPSTLIPIM 469
Query: 392 KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN 451
K + +AGDH QLPPTV S EA K L +TLFERL + + E++SML VQYRM+E IM
Sbjct: 470 KADKFYIAGDHKQLPPTVTSEEA--KELEKTLFERLINSHS-ELSSMLQVQYRMNEKIME 526
Query: 452 WSSKQLYNSKIKA---------------HPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEE 496
+ +++ Y K++A P K + L +D + + E + E
Sbjct: 527 FPNREFYEGKLRAAEIVKNHTLADFDLKEPEKFKEILNPSEPLAFLDTSDINAYEFQPEG 586
Query: 497 DSTM-NEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK-ILRSKDDKLKNMEVS 554
++ N EA++A++ A+ L + GV DIGIITPYAAQV L+K +L KD K +EV+
Sbjct: 587 STSYENYEEAKIAISIAEELCKIGVDKKDIGIITPYAAQVKLIKQLLLEKDLK---VEVN 643
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGF 614
+VDGFQGREKE IIIS VRSN + E+GFL D RR+NVA+TR +R+ + + ET+S+
Sbjct: 644 SVDGFQGREKEVIIISFVRSNDEGEIGFLKDLRRLNVAITRPKRKLIAIGNAETLSNHEV 703
Query: 615 LKRLIEYFEEHAEYL 629
KR IE +E +L
Sbjct: 704 YKRFIENIKEKGTFL 718
>gi|402086548|gb|EJT81446.1| DNA helicase [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 852
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 202/562 (35%), Positives = 293/562 (52%), Gaps = 77/562 (13%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEFQ-----STKGDVLPAHKFGTHDVVVLKPNKAD- 103
Q+ G+ + NL +TG G+T++E S+ LP H DVV++ A
Sbjct: 43 QRAGAALTNLTVEGRRTGSGGRTVVELGPDPAVSSDTGELPEHGLRVGDVVLVAEQPAGS 102
Query: 104 -----------LGSPALGQ-------GVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLAN 145
GS + V L DS+ A E+GLN + + KLA+
Sbjct: 103 AKKREVRELERAGSRGVVTRVRRRDLSVALDLDDSAGGAAAGQKEEKGLNGRVWVVKLAD 162
Query: 146 EVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKP-------FNSNLD 198
+VT+RRM + ++ K + + + + VLFG P+ + D+ P + L+
Sbjct: 163 DVTFRRMTMMMEKMQK-LSDSEQSNFMRVLFGLSSPSPVPADLGADPDLSKIEWIDPTLN 221
Query: 199 HSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVE 258
SQKDA+ AL+S + ++HGPPGTGKT T++E+ILQ +K+G +IL CA SN+AVDN+ E
Sbjct: 222 ESQKDAVRFALASPEIALIHGPPGTGKTHTLIELILQFLKQGLRILVCAPSNVAVDNVAE 281
Query: 259 RLVPHR-VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKD 317
RL PH +VR+GHPARLLP V +LD + ++ D+R EM A G + KTK
Sbjct: 282 RLAPHSGAPIVRIGHPARLLPSVAAHSLDVLTQTSEAGAIVRDVRAEMDAKQGSIKKTKS 341
Query: 318 KNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDE 377
RR I +L+ L KE R+R++ VTD+++++ VVL TL GA +L FD+VIIDE
Sbjct: 342 ARERRLIYADLKELRKEFRERERRCVTDLVRSSKVVLATLHGAGGFQLRQEKFDVVIIDE 401
Query: 378 AAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKG------------------L 419
A+QALE CW+AL + + AGDHLQLPPT++S+ ++ L
Sbjct: 402 ASQALEAQCWVALFAAKKAVCAGDHLQLPPTIKSLNSKTPTAAGGAAPAAAKGKGRGATL 461
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH-----------PSG 468
TLF+RL L+G + MLT QYRMHE IM + S +LY S++ A P
Sbjct: 462 ETTLFDRLLKLHGASIKRMLTTQYRMHEKIMRFPSDELYGSELTAAEAVKGRLLRDLPYA 521
Query: 469 VKRTSSTEPTLLLIDIAGCDMEEKKDEE---------------DSTMNEGEAEVAMAHAK 513
V+ T T L+ ID G + E+ D+ +S NE EA + +
Sbjct: 522 VEDTDETREPLIFIDTQGGNFSERSDDTEAGDAAGKKKIALHGESKSNEREAALVSQQVR 581
Query: 514 RLIQSGVHASDIGIITPYAAQV 535
L+ +GV DI ++TPY QV
Sbjct: 582 LLVDAGVKPEDIAVVTPYNGQV 603
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 69/93 (74%), Gaps = 4/93 (4%)
Query: 536 VLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
VL +L+ + +E+ +VDGFQGREKEA+I+S+VRSNS+ EVGFL ++RR+NVA+TR
Sbjct: 757 VLAPLLK---EAFPGIELGSVDGFQGREKEAVIVSLVRSNSEGEVGFLGEKRRLNVAMTR 813
Query: 596 ARRQCCLVCDTETVS-SDGFLKRLIEYFEEHAE 627
+R ++ D++TV FLKR +E+ EEHA+
Sbjct: 814 PKRSLTIIGDSDTVKRGSAFLKRWMEHLEEHAD 846
>gi|365759666|gb|EHN01443.1| Hcs1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 682
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 241/695 (34%), Positives = 367/695 (52%), Gaps = 90/695 (12%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQ--KKGSTILNLKCVDAQTGLMGKTL 73
+E S I+ E+E +I ITS L Q + G I N+ + ++GL+GK
Sbjct: 3 KELASKFLSSINHEREQDIQ--ITSKLLTTLSIQQLVQNGLAINNVHLENIRSGLIGKLY 60
Query: 74 LEF--------QSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALG--------------Q 111
+E + +GD+ K G D+V+++P K +
Sbjct: 61 MELGPNLEINDRIQRGDM----KIG--DIVLIRPAKTKTKAKTKMKKAPEDSNEDQVECS 114
Query: 112 GVVYRLKDSSITVAFD---DIPEEGLNS--PLRLEKLANEVTYRRMKDALIQLSK---GV 163
GV+Y++ D+ IT+A + D+ S L + K N VTY+RM+ + +LS+ V
Sbjct: 115 GVIYKMSDTQITIALEESQDVIATTFYSYNKLYILKTTNTVTYKRMESTMRKLSEFTSPV 174
Query: 164 QNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGT 223
Q+ L+ K L+ +F N NL+ SQK AI+ A ++ ++ ++HGPPGT
Sbjct: 175 QDKITQYLVNERLFVPKSGELQNVGSF--LNPNLNDSQKAAINFA-TNNDLTIIHGPPGT 231
Query: 224 GKTTTVVEIILQEVKRG--SKILACAASNIAVDNIVERLVP--HRVRLVRLGHPARLLPQ 279
GKT ++E+I Q + + +IL C SNI+VD I+ERL P L+R+GHPARLL
Sbjct: 232 GKTFALIELIQQLLIKNPEKRILICGPSNISVDTILERLTPLVSNNLLLRIGHPARLLDS 291
Query: 280 VLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQ 339
+LD +L N+ + DI +E+ L + K K+ RRE E++ L K+ +KR+
Sbjct: 292 NKRHSLD--ILSKKNT-IVRDISQEIDKLIQENKKLKNYKQRRENWNEIKLLRKDLKKRE 348
Query: 340 QLAVTDVIKNADVVLTTLTGAVSRKL--------DNTSFDLVIIDEAAQALEIACWIALL 391
+ D+I + +V+TTL G+ SR+L + FD +IIDE +QA+E CWI L+
Sbjct: 349 FKTIKDLIIQSRIVVTTLHGSSSRELCSLYRNDPNVKLFDTLIIDEVSQAMEPQCWIPLI 408
Query: 392 ----KGSRCILAGDHLQLPPTVQSVEAEK--KGLGRTLFERLADLYGD-EVTSMLTVQYR 444
+ + ILAGD+ QLPPT+++ + + + L TLF+RL ++ E+ L +QYR
Sbjct: 409 AHQNQFDKLILAGDNKQLPPTIKTEDDQNVIRNLETTLFDRLLKIFPKREMIKFLNIQYR 468
Query: 445 MHEHIMNWSSKQLYNSKIKA-----------------HPSGVKRTSSTEPTLLLIDIAGC 487
M+E IM + S+ +Y+ K+ A PSG + P L+ D G
Sbjct: 469 MNEKIMEFPSQSMYHGKLIADATVASRLLIDISSVDVSPSGDDDIDTKLP-LIWYDTQGD 527
Query: 488 DMEEKKDEED---STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSK 544
+ E D+ S NEGE + H + L V IG+I+PY AQV LK L
Sbjct: 528 EFPETADDATILGSKYNEGEIAIVKKHIESLKSLNVQQDSIGVISPYNAQVSHLKRLIHD 587
Query: 545 DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
+L N+E+STVDGFQGREK+ II+S+VRSN + EVGFL + RR+NVA+TR RRQ +V
Sbjct: 588 KLELNNIEISTVDGFQGREKDVIILSLVRSNEEFEVGFLKEERRLNVAMTRPRRQLVVVG 647
Query: 605 DTETVSSDG--FLKRLIEYFEEHAE--YLSGSEYL 635
+ E + G +LK E+ EE+A+ Y + +YL
Sbjct: 648 NIEVLRRCGNKYLKSWSEWCEENADIRYPNIDDYL 682
>gi|385800522|ref|YP_005836926.1| DNA helicase [Halanaerobium praevalens DSM 2228]
gi|309389886|gb|ADO77766.1| DNA helicase [Halanaerobium praevalens DSM 2228]
Length = 749
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 228/670 (34%), Positives = 343/670 (51%), Gaps = 71/670 (10%)
Query: 18 FVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQ 77
+ + L+DLE+ EI + Q KG +LNL+ D + L++F+
Sbjct: 89 YYNKFYQLVDLERNEEIDRHKLEIKYLSARARQAKGRALLNLRGKDNGNTFGHRPLVKFK 148
Query: 78 S-TKGDVLPAHKFGTHDVVVLKPNKA-DLGSPALGQGVVYRLKDSSITVAFDDIPEEGL- 134
S +G+ L + D+V++ NK + +P G V SITVAF+ P +
Sbjct: 149 SKYQGEKLAETQITPGDLVMISLNKPLNKNNPT---GTVIEKTAYSITVAFESSPPNFIY 205
Query: 135 NSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK-DIAFKPF 193
N +RL+ N+ +++RM AL ++ K N +L +KP + D+ + F
Sbjct: 206 NRGVRLDLFVNDTSFQRMFSALEKI-KHPANEIEKSKRDILLNRKKPEFKSEFDLEIENF 264
Query: 194 NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAV 253
N HSQK+AI +L +K ++++ GPPGTGKT T VEII Q VK G K+LA A SN AV
Sbjct: 265 N----HSQKNAIKNSLQAKKLYLIQGPPGTGKTLTAVEIIQQAVKNGDKVLATADSNTAV 320
Query: 254 DNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGK-- 311
DN++E L + ++++R+GHP R+ ++ E LD VL + A +R ++ L K
Sbjct: 321 DNLLELLAANNLKVIRIGHPIRVNKKLREHTLDEIVLEHQDYLKAEKLRDQVSDLINKQE 380
Query: 312 ------------LLKTKDKN-TRREIQKELRTLSKE------------------ERKRQQ 340
L + KN ++++K +R +S E +K +
Sbjct: 381 AYIYPSGKYRRGLSDQEIKNYAEKDLEKHVRGISPEVIEEMASWIELQEKIDKYFKKIES 440
Query: 341 L---AVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCI 397
L AV ++I ADV+ TT A + L+N FDL IIDEA QA + A I LK + I
Sbjct: 441 LENKAVEELITAADVICTTNITAGAEILENQQFDLSIIDEATQATQPAALIPYLKAKKTI 500
Query: 398 LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQL 457
L GD QLPPTV + EA K GL +LFE+L Y ++ +S+L +QYRMH IM +SS
Sbjct: 501 LIGDQQQLPPTVVNQEAAKNGLKISLFEKLIKTYQNDFSSLLKIQYRMHRKIMGFSSIYF 560
Query: 458 YNSKIKAHPSGVKRTSS------------------TEPTLLLIDIAGCDMEEKKDE-EDS 498
YN+ +KA S K T S E ++ +D EE+ +S
Sbjct: 561 YNNYLKAADSVAKNTLSDLGFQLENKSCFPDKSLKAEYPMVFLDTKEMKAEERSFAGSNS 620
Query: 499 TMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDG 558
N EAE+ + R ++S + +I +I Y QV + ++ +K KN+E+ TVD
Sbjct: 621 YDNPVEAEIVLDLLDRALKSSLKEEEIAVIAAYKDQVDFI----NQHNKFKNVEIDTVDA 676
Query: 559 FQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRL 618
FQGREKE II S VRSN +GFL D RR+NVA+TRA+R+ V D+ T+ ++L
Sbjct: 677 FQGREKEMIIFSAVRSNQDNNIGFLRDLRRLNVALTRAKRKMIFVGDSSTICKYNVYEKL 736
Query: 619 IEYFEEHAEY 628
++Y ++ Y
Sbjct: 737 LKYIKKSGFY 746
>gi|390945185|ref|YP_006408946.1| type III restriction enzyme, res subunit [Belliella baltica DSM
15883]
gi|390418613|gb|AFL86191.1| Type III restriction enzyme, res subunit [Belliella baltica DSM
15883]
Length = 643
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 209/649 (32%), Positives = 343/649 (52%), Gaps = 37/649 (5%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
++QE + L+ LE + ++ ++ +++G L+ ++ GL + +
Sbjct: 3 NIQEELKTSLKLLQLEWKEDLEQYKKKFLYTSISDKKEQGVCWYPLQIKKSKIGLGDRLI 62
Query: 74 LEFQSTKGDVLPAHKFGTHDVVVLKPNKADL-GSPALGQGVVYRLKDSSITVAF--DDIP 130
LE + + D +H F + V L N G GV+ +K +T+ +D P
Sbjct: 63 LELE--RFDSNQSHVFQSGKSVSLFSNADGFQGHEFRMNGVINFVKKDVMTLTLQSNDFP 120
Query: 131 EEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK---D 187
+ + + ++ L +E +YR M+ + + K G L +L GE P+ +K D
Sbjct: 121 DWLYSGKIGVDLLFDEASYREMESTMKAVIKA-DKGRLGELKSILLGETLPSFSQKVYHD 179
Query: 188 IAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACA 247
+ L+ +Q A+ S +V ++HGPPGTGKTTT++ I +K ++L CA
Sbjct: 180 L------QELNPAQNQALRLINQSDDVAIIHGPPGTGKTTTLIAAIQNILKTNRQVLVCA 233
Query: 248 ASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK---E 304
SN AVD +VE+LV V +R+GHPAR+ ++L LDA++ ++ +RK E
Sbjct: 234 PSNAAVDLLVEKLVDKGVPTLRIGHPARVDDKILAQTLDAKIASHESYKDLKKLRKSVDE 293
Query: 305 MKALNGKLLKT---KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAV 361
+ L K + +++ R+ + E + ++ + + DV + V +TL G+
Sbjct: 294 YRKLGRKYKRNFGHEERVQRKRLLDEAGRMKEDADILENYIMYDVFQMTQVFASTLVGSS 353
Query: 362 SRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGR 421
++ L F V IDEA Q LE A WI ++K + ++ GDHLQLPPT++S EA K GL
Sbjct: 354 NQALKGIDFPYVFIDEAGQGLEAATWIPIMKAEKVVMTGDHLQLPPTIKSYEAAKAGLSE 413
Query: 422 TLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH-PSGVKRTSSTEPTLL 480
TLFE++ E + MLTVQYRM E IM +SSK Y + ++A + + + E L
Sbjct: 414 TLFEKVIKR-QPEASKMLTVQYRMPEKIMGFSSKLFYKNNLEAAVNTHIHFLTEEESVLE 472
Query: 481 LIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQS-GV-----HASDIGIITPYAA 533
ID AG E +++E ST+N EA+ + + + L++ G+ +IG+I+PY A
Sbjct: 473 FIDTAGSGFSEHQEKESLSTLNAEEAKFTLKYLENLLKRVGIGKIKTEGWNIGLISPYRA 532
Query: 534 QVVLLKILRSKDDKLKNME-------VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR 586
QV + L + + N+ + ++DGFQG+E++ I IS+VRSN+ E+GFLSD
Sbjct: 533 QVRKFQELIFESYEYPNLRSFSELLTIDSIDGFQGQERDIIFISLVRSNANGEIGFLSDT 592
Query: 587 RRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
RRMNVA+TRA+R+ ++ D+ T+SS+ F + Y EE EY S E+L
Sbjct: 593 RRMNVALTRAKRKLVVIGDSSTLSSNDFYNAFLNYVEEKGEYKSIYEFL 641
>gi|410028927|ref|ZP_11278763.1| type III restriction enzyme, res subunit [Marinilabilia sp. AK2]
Length = 642
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 202/578 (34%), Positives = 314/578 (54%), Gaps = 29/578 (5%)
Query: 82 DVLPAHKFGTHDVVVLKPNKADLGSPALG-QGVVYRLKDSSITVAF--DDIPEEGLNSPL 138
D +H F + V + N SP L GV+ ++K +TV +++P+ +
Sbjct: 69 DTKQSHLFQSGKSVSIFSNLQQHISPELRINGVINQVKKDVMTVTLQVEELPDWIHKGRV 128
Query: 139 RLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLD 198
++ L +E +YR M+ AL + K N L +L GE++ +++A + NL+
Sbjct: 129 GVDLLFDEASYREMETALKAVIKA-DNSRLGALKKILLGEREAVF--EEVAVGKYE-NLN 184
Query: 199 HSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVE 258
SQ++A+ S+K+V ++HGPPGTGKTTT+V + ++ ++L CA SN AVD +VE
Sbjct: 185 PSQQEALGLVASAKDVAIIHGPPGTGKTTTLVHAVSYSLEHNKQVLVCAPSNAAVDLLVE 244
Query: 259 RLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK---EMKALNGKLLKT 315
+L + +R+GHPAR+ +L LDA+V D+ ++K E + L K ++
Sbjct: 245 KLRERGLSTLRIGHPARVEDHILSQTLDAKVALHDSYKDLKRLKKKADEFRKLGQKYKRS 304
Query: 316 ---KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+++ +R + E+ L E ++ D+ + V TTL GA + L F L
Sbjct: 305 FGPEERIQKRRLFDEVNRLKDEGEHLEEYIQYDIFQQTQVFATTLVGASNSALKGMKFPL 364
Query: 373 VIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG 432
V IDEAAQ LE A WI + K ++AGDH QLPPT++S EA GL TLFE++
Sbjct: 365 VFIDEAAQGLEAATWIPIQKAQAVVMAGDHFQLPPTIKSYEAAMNGLSETLFEKVIK-RQ 423
Query: 433 DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT-SSTEPTLLLIDIAGCDMEE 491
+ ML +QYRM E IM +S++ YN + A + K S EP L +D AG E
Sbjct: 424 PLASKMLQLQYRMPELIMGFSNQMFYNHGLIAADNTSKHYLSEEEPVLEFVDTAGSGFLE 483
Query: 492 KKDEED-STMNEGEAEVAMAHAKRLIQ-SGV-----HASDIGIITPYAAQVVLLKILRSK 544
+EE ST N+ EA A+ + L++ +G+ +IG+I PY AQV L L +
Sbjct: 484 AVEEESLSTFNQEEANFALQCLEDLLKRTGIAKMKEKGWNIGVIAPYRAQVRKLNELLFE 543
Query: 545 DDKLKNME-------VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
N+ + ++DGFQG+E++ I+IS+VRSN+K E+GFL+D RRMNV +TRA+
Sbjct: 544 SYAFPNLRSFSELLTIDSIDGFQGQERDIILISLVRSNAKGEIGFLADIRRMNVGLTRAK 603
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
R+ ++ D+ T+ S F + +Y EE Y S E+L
Sbjct: 604 RKLVVIGDSATLGSHPFYRSFFDYIEEKKCYKSIYEWL 641
>gi|401840571|gb|EJT43340.1| HCS1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 682
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 238/689 (34%), Positives = 363/689 (52%), Gaps = 78/689 (11%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQ--KKGSTILNLKCVDAQTGLMGKTL 73
+E S I+ E+E +I ITS L Q + G I N+ + ++GL+GK
Sbjct: 3 KELASKFLSSINHEREQDIQ--ITSKLLTTLSIQQLVQNGLAINNVHLENIRSGLIGKLY 60
Query: 74 LEFQSTK--GDVLPAHKFGTHDVVVLKPNKADLGSPALG--------------QGVVYRL 117
+E D + D+V+++P K + GV+Y++
Sbjct: 61 MELGPNLEINDRIQRGDMRIGDIVLIRPAKTKTKAKTKVKKTPEDSNEDQVECSGVIYKM 120
Query: 118 KDSSITVAFD---DIPEEGLNS--PLRLEKLANEVTYRRMKDALIQLSK---GVQNGPAA 169
D+ IT+A + D+ S L + K N VTY+RM+ + +LS+ VQ+
Sbjct: 121 SDTQITIALEESQDVIATTFYSYNKLYILKTTNTVTYKRMESTMRKLSEFTSPVQDKITQ 180
Query: 170 GLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTV 229
L+ K L+ +F N NL+ SQK AI+ A ++ ++ ++HGPPGTGKT T+
Sbjct: 181 YLVNERLFVPKSGELQNVGSF--LNPNLNDSQKAAINFA-TNNDLTIIHGPPGTGKTFTL 237
Query: 230 VEIILQEVKRG--SKILACAASNIAVDNIVERLVP--HRVRLVRLGHPARLLPQVLESAL 285
+E+I Q + + +IL C SNI+VD I+ERL P L+R+GHPARLL +L
Sbjct: 238 IELIQQLLIKNPEKRILICGPSNISVDTILERLTPLVSNNLLLRIGHPARLLDSNKRHSL 297
Query: 286 DAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTD 345
D +L N+ + DI +E+ L + K K+ RRE E++ L K+ +KR+ + D
Sbjct: 298 D--ILSKKNT-IVRDISQEIDKLIQENKKLKNYKQRRENWNEIKLLRKDLKKREFKTIKD 354
Query: 346 VIKNADVVLTTLTGAVSRKLDNTS--------FDLVIIDEAAQALEIACWIALL----KG 393
+I + +V+TTL G+ SR+L + FD +IIDE +QA+E CWI L+ +
Sbjct: 355 LIIQSRIVVTTLHGSSSRELCSLYRNDPNLKLFDTLIIDEVSQAMEPQCWIPLIAHQNQF 414
Query: 394 SRCILAGDHLQLPPTVQSVEAEK--KGLGRTLFERLADLYGD-EVTSMLTVQYRMHEHIM 450
+ ILAGD+ QLPPT+++ + + + L TLF+RL ++ E+ L +QYRM+E IM
Sbjct: 415 DKLILAGDNKQLPPTIKTEDDQNVIRNLETTLFDRLLKIFPKREMIKFLNIQYRMNEKIM 474
Query: 451 NWSSKQLYNSKIKA-----------------HPSGVKRTSSTEPTLLLIDIAGCDMEEKK 493
+ S+ +Y+ K+ A PSG + P L+ D G + E
Sbjct: 475 EFPSQSMYHGKLIADATVASRLLIDISSVDVSPSGDDDIDTKLP-LIWYDTQGDEFPETA 533
Query: 494 DEED---STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN 550
D+ S NEGE + + + L V IG+I+PY AQV LK L +L N
Sbjct: 534 DDATILGSKYNEGEIAIVKKYIESLKSLNVQQDSIGVISPYNAQVSHLKRLIHGKLELNN 593
Query: 551 MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS 610
+E+STVDGFQGREK+ II+S+VRSN + EVGFL + RR+NVA+TR RRQ +V + E +
Sbjct: 594 IEISTVDGFQGREKDVIILSLVRSNEEFEVGFLKEERRLNVAMTRPRRQLVVVGNIEVLQ 653
Query: 611 SDG--FLKRLIEYFEEHAE--YLSGSEYL 635
G +LK E+ EE+A+ Y + +YL
Sbjct: 654 RCGNKYLKSWSEWCEENADIRYPNIDDYL 682
>gi|255013517|ref|ZP_05285643.1| putative helicase [Bacteroides sp. 2_1_7]
gi|410103629|ref|ZP_11298550.1| hypothetical protein HMPREF0999_02322 [Parabacteroides sp. D25]
gi|409236358|gb|EKN29165.1| hypothetical protein HMPREF0999_02322 [Parabacteroides sp. D25]
Length = 640
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 184/514 (35%), Positives = 295/514 (57%), Gaps = 24/514 (4%)
Query: 132 EGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK 191
+G ++ L ++ +E +Y+ M AL + + +N + L VL G++KP +
Sbjct: 127 QGKSNDLGVQLYFDETSYKTMFSALSDVMRA-KNNQLSHLRDVLLGQEKPGQRELFPIRF 185
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNI 251
P+ L+ SQ++A++K L +K V ++HGPPGTGKTTT+VE I + + R ++++ CA SN
Sbjct: 186 PW---LNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQVIVCAQSNT 242
Query: 252 AVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGK 311
AVD I E+LV + ++R+G+P R+ ++L + + + IRK ++ +
Sbjct: 243 AVDCISEKLVDRGINVLRIGNPTRINDKMLSFTYERRFESHPDYPELWSIRKAVRDIQSN 302
Query: 312 LLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+ K K + R I+ L L + + T++ A VV TL G+ +R + N F
Sbjct: 303 MRK-KSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRVMMNRHFT 361
Query: 372 LVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
+ IDEAAQALE ACWIA+ K R ILAGDH QLPPT++ +EAE++GLGRTL +++A
Sbjct: 362 TLFIDEAAQALEAACWIAIGKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKIAHT- 420
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----GVKRTSSTEPTLLLIDIAGC 487
E S+L +QYRMHE IM +SS+ Y++++++ P G+ R + ++ D + C
Sbjct: 421 KPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDT---PIVWFDTSEC 477
Query: 488 DMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHAS------DIGIITPYAAQVVLLKI 540
D E EE S +N EAE+ + + IQ D G+I+PY AQV ++
Sbjct: 478 DFTENTREETMSRVNRQEAELLVEQLRSYIQKISKERVLEENIDFGLISPYKAQVQYIRK 537
Query: 541 LRSKDDKLKNME----VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
L +D K + + TVDGFQG+E++ I+IS+VR+N ++GFL+D RRMNVA+TRA
Sbjct: 538 LIKQDAFFKPLRRLITIHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRMNVAITRA 597
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLS 630
R + ++ D T++ F L Y + + ++
Sbjct: 598 RMKLMILGDASTLTRHAFYNELYNYISQRGKIIT 631
>gi|328853328|gb|EGG02467.1| hypothetical protein MELLADRAFT_38533 [Melampsora larici-populina
98AG31]
Length = 701
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 242/702 (34%), Positives = 358/702 (50%), Gaps = 102/702 (14%)
Query: 15 LQEFVSVMAPLIDLEKEAE-------ISASITSGASRNLDTAQKKGSTILNLKCVDAQTG 67
L +++ L+ LE+++E S + G ++ L ++ G +I L G
Sbjct: 7 LDKWLKAQLRLLRLERDSEKVEFDLLTSDKVKQGQTKLL---ERMGISIGGLGVKSTSIG 63
Query: 68 LMGKTLLEF----QSTKGDVLPAHKFGT--------HDVVVLKPNKADLGSPALG----- 110
L GKT +E Q +P H F HD+ K + + L
Sbjct: 64 LGGKTTIELERPAQYHTDPKIPYHTFRPGLPAGIIDHDLSSGKAKGVNTKTSKLDKITII 123
Query: 111 QGVVYRLKDSSITVAF----DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNG 166
+GVV ++ D+SIT+ D P E L + R+ KLA+ T+ R++ + L +
Sbjct: 124 EGVVSKVSDTSITLFLSSNQDSNPPE-LPARCRIIKLADTGTFDRLESTIETLRISCE-- 180
Query: 167 PAAGLIPV---LFGEQKPTVLKKDIA-----FKPFNS-NLDHSQKDAISKALSSKNVFML 217
A G+I ++ P +KD P N+ L+ SQ+ A+ ALS + ++
Sbjct: 181 -AEGIIEPSEDTHKDKAPEDTQKDKTESTNQATPENALGLNDSQQRAVRHALSPAPITLV 239
Query: 218 HGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLL 277
GPPGTGKT T+V II RG +IL AASN+A+DNI ERL+ ++ L RLGHPAR+L
Sbjct: 240 FGPPGTGKTHTLVSIISALHARGDRILIAAASNLAIDNIAERLLAKQLPLTRLGHPARVL 299
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT----KDK---NTRREIQKELRT 330
+ +S LD Q D S + D++ E +NGKL K KDK R + +++
Sbjct: 300 DSLSQSTLDHQCNTFDGSEIIRDLKVE---INGKLNKLSAQGKDKLRGKARSTVYMDIKD 356
Query: 331 LSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIAL 390
L K+ R+R++ +IK A +V T GA SR+L+N FD+VIIDE+ QA E ACWI +
Sbjct: 357 LRKDYRQRERKHTDGIIKQARIVCATTHGAGSRQLENQVFDVVIIDESTQAYEAACWIPI 416
Query: 391 LKG-SRCILAGDHLQLPPTVQSVE----------------AEK------------KGLGR 421
LK S+ ILAGD LQLPPT+ E EK K L
Sbjct: 417 LKSKSKVILAGDPLQLPPTINLSERVGALTDLETTGKPTTKEKPTRRGFFMMKPPKSLEV 476
Query: 422 TLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTL-- 479
T+F+RL ++ +L VQYRMH IM + SKQLY K+KA S P +
Sbjct: 477 TMFDRLLK-SNTSISCLLDVQYRMHSMIMEFPSKQLYKGKLKAAESVAGHLLKDLPNVSE 535
Query: 480 ----------LLIDIAGCDMEEKKDEED---STMNEGEAEVAMAHAKRLIQSGVHASDIG 526
L ID AG M ++ EE S MNE EA + + +++G+ I
Sbjct: 536 SDNDGIADPVLFIDTAGSHMHDRIAEEGGDGSVMNENEANLVVKQVTDFLEAGLLPEQIM 595
Query: 527 IITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR 586
+++PY+AQV LL L + + ++D QGRE EA+I+S+VRSN++ VGFL +
Sbjct: 596 VLSPYSAQVALLSSLLKS--LYPTLAIGSIDSCQGRENEAVILSLVRSNTEGVVGFLHET 653
Query: 587 RRMNVAVTRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE 627
RR+NVA+TRA+R ++ D++T+S G FLK+ +++ E +AE
Sbjct: 654 RRLNVAMTRAKRSLTIIGDSDTLSKGGDFLKKWMDWLENNAE 695
>gi|256840040|ref|ZP_05545549.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256738970|gb|EEU52295.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 640
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 188/521 (36%), Positives = 298/521 (57%), Gaps = 26/521 (4%)
Query: 125 AFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVL 184
A DI E+ ++ L ++ +E +Y+ M AL + + +N + L VL G++KP
Sbjct: 122 ALMDIQEK--SNDLGVQLYFDETSYKTMFSALSDVMRA-KNNQLSHLRDVLLGQEKPGQR 178
Query: 185 KKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKIL 244
+ P+ L+ SQ++A++K L +K V ++HGPPGTGKTTT+VE I + + R ++++
Sbjct: 179 ELFPIRFPW---LNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQVI 235
Query: 245 ACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKE 304
CA SN AVD I E+LV + ++R+G+P R+ ++L + + + IRK
Sbjct: 236 VCAQSNTAVDCISEKLVDRGINVLRIGNPTRINDKMLSFTYERRFESHPDYPELWSIRKA 295
Query: 305 MKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRK 364
++ + + K K + R I+ L L + + T++ A VV TL G+ +R
Sbjct: 296 VRDIQSNMRK-KSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRV 354
Query: 365 LDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLF 424
+ N F + IDEAAQALE ACWIA+ K R ILAGDH QLPPT++ +EAE++GLGRTL
Sbjct: 355 MMNRHFTTLFIDEAAQALEAACWIAIGKADRVILAGDHHQLPPTIKCIEAEREGLGRTLM 414
Query: 425 ERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----GVKRTSSTEPTLL 480
+++A E S+L +QYRMHE IM +SS+ Y++++++ P G+ R + ++
Sbjct: 415 QKIAHT-KPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDT---PIV 470
Query: 481 LIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHAS------DIGIITPYAA 533
D + CD E EE S +N EAE+ + + IQ D G+I+PY A
Sbjct: 471 WFDTSECDFTENTREETMSRVNRQEAELLVEQLRSYIQKISKERVLEEHIDFGLISPYKA 530
Query: 534 QVVLLKILRSKDDKLKNME----VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRM 589
QV ++ L +D K + V TVDGFQG+E++ I+IS+VR+N ++GFL+D RRM
Sbjct: 531 QVQYIRKLIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRM 590
Query: 590 NVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLS 630
NVA+TRAR + ++ D T++ F L Y + + ++
Sbjct: 591 NVAITRARMKLMILGDASTLTRHAFYNELYNYISQRGKIIT 631
>gi|406662219|ref|ZP_11070322.1| putative DNA helicase [Cecembia lonarensis LW9]
gi|405553902|gb|EKB49075.1| putative DNA helicase [Cecembia lonarensis LW9]
Length = 659
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 197/578 (34%), Positives = 317/578 (54%), Gaps = 29/578 (5%)
Query: 82 DVLPAHKFGTHDVVVLKPNKADLGSPALG-QGVVYRLKDSS--ITVAFDDIPEEGLNSPL 138
D +H F + V + N SP L GV+ ++K +T+ +++PE +
Sbjct: 86 DTNQSHLFQSGKSVSIFSNLQQHISPDLRINGVINQIKKDVMIVTLQVEELPEWLHKGKV 145
Query: 139 RLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLD 198
++ L +E +YR M+ AL + K +N L +L G+++P + +L+
Sbjct: 146 GIDLLFDEASYREMESALKAVIKA-ENSRLGELKNILLGQKEPNF---EGVSHLIPVDLN 201
Query: 199 HSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVE 258
SQ+ A+ ++K+V ++HGPPGTGKTTT+V+ ++ +++ +++L CA SN AVD +VE
Sbjct: 202 PSQQAALQLVSAAKDVAIIHGPPGTGKTTTLVQAVIGSLQQHAQVLVCAPSNAAVDLLVE 261
Query: 259 RLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDN------SSLASDIRKEMKALNGKL 312
++ + +R+GHPAR+ +L LDA++ D+ +D +++ +
Sbjct: 262 KIREKGISTLRIGHPARVEDHILSQTLDAKITLHDSYKDLKKLKKKADEYRKLGQKYKRS 321
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
++++ R+ + E L E ++ + DV + V +TL GA + L F +
Sbjct: 322 FGSEERMQRKRLFDEANRLKDEAEHLEEYIMYDVFQQTQVFASTLVGASNSVLKGMKFPI 381
Query: 373 VIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG 432
V IDEAAQ LE A WI + K + ++AGDH QLPPT++S EA K GL TLFE++
Sbjct: 382 VFIDEAAQGLEAASWIPIQKALKVVMAGDHCQLPPTIKSYEAAKAGLSETLFEKVTK-RQ 440
Query: 433 DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT-SSTEPTLLLIDIAGCDMEE 491
+VT ML +QYRM E IM +S+K Y +++ A + S EP L ID AG E
Sbjct: 441 PQVTKMLQLQYRMPELIMGFSNKIFYQNELGAAKNTESHFLSEGEPVLEFIDTAGSGFVE 500
Query: 492 KKDEED-STMNEGEAEVAMAHAKRLIQ-SGV-----HASDIGIITPYAAQVVLLKILRSK 544
+EE ST N+ EA A+ + + L++ +G+ IG+I PY AQV L +
Sbjct: 501 AIEEESLSTFNQEEARFALQYLEDLLKRTGIAKIKEKRWTIGLIAPYRAQVRKFNELLFE 560
Query: 545 DDKLKNME-------VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
N+ + ++DGFQG+E++ I+IS+VRSN+K E+GFL+D RRMNVA+TRA+
Sbjct: 561 SYAFPNLRSFPELLTIDSIDGFQGQERDIILISLVRSNAKGEIGFLADTRRMNVALTRAK 620
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
R+ ++ D+ T+S F +Y EE+ Y S EYL
Sbjct: 621 RKLVVIGDSATLSHHSFYNAFFDYVEENNCYKSVYEYL 658
>gi|296109905|ref|YP_003616854.1| DNA helicase [methanocaldococcus infernus ME]
gi|295434719|gb|ADG13890.1| DNA helicase [Methanocaldococcus infernus ME]
Length = 639
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 228/660 (34%), Positives = 366/660 (55%), Gaps = 86/660 (13%)
Query: 18 FVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF- 76
+V LI+LE++ E+ R ++ G ILNLK L G TL+ F
Sbjct: 7 YVRKFLNLIELERKYEMEFH-KEEIKRLGRKREEVGRAILNLKGKFLGQSL-GCTLVRFG 64
Query: 77 --QSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD-DIPEEG 133
+ K ++ P DVV++ +K D L V+Y + + I VAFD D+P
Sbjct: 65 RSKEIKTEISPG------DVVLV--SKGDPLKSDLYANVIY-VGKNFIDVAFDVDVPRWV 115
Query: 134 LNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKP-TVLKKDIAFKP 192
+R++ N++T++RMK+AL + K LI ++ G +KP LK+DI +
Sbjct: 116 FKERVRIDLFINDITFKRMKEALRYIEKE-----KPKLINIILGIEKPEKPLKEDIEMEF 170
Query: 193 FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNI 251
++ L+ SQK A+ +A+ SK+++++HGPPGTGKT T+ E+I+QEVK K+LA A SNI
Sbjct: 171 YDKELNESQKRAVKRAILSKDLYLIHGPPGTGKTRTLTEVIVQEVKFNKHKVLATADSNI 230
Query: 252 AVDNIVERLVPHR--VRLVRLGHPARL--------LPQVLESALDAQ-VLRGDNSSLASD 300
A DNI+E L+ +++VR+GHP R+ LP ++E Q VL+ S+
Sbjct: 231 AADNILEYLIKKYPFLKVVRIGHPTRISKDLIEHSLPYLIECHPKYQKVLKLKEK--ISE 288
Query: 301 IRKEMKAL------------NGKLLKT--KDKNTRREIQKELRTLSKEERKRQQLAV--- 343
I++E + ++LK K+K+ R +++++++++ +K ++ V
Sbjct: 289 IKEERDKFLKPSPRWRRGMSDDQILKVAKKNKDYRGVPKEKIKSMAQWIKKNAKIKVLVD 348
Query: 344 ----------TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKG 393
++IK ADV+++T + A S L + FD+V+IDE +QA+E +C I ++KG
Sbjct: 349 KLEKLSKEIADEIIKEADVIVSTNSMAGSEVLKDYFFDVVVIDEGSQAMEPSCLIPIIKG 408
Query: 394 SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWS 453
+ I+AGDH QLPPTV S E L +TLFE+L Y E +S+L +QYRM+E IM +
Sbjct: 409 EKLIMAGDHKQLPPTVLSDNEE---LKKTLFEKLIKKYP-EFSSILEIQYRMNEKIMEFP 464
Query: 454 SKQLYNSKIKAHPSG--------VKRTSSTEPTL---LLIDIAGCDMEEKKDEED-STMN 501
++ Y +K+KA S VK + + + + D EEK+D++ S N
Sbjct: 465 NRMFYENKLKAAESVKNITLMDLVKEVDEEDKDIINKIPVQFFHVDGEEKRDKDSPSYYN 524
Query: 502 EGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQG 561
E EA+ + K+L++ + S +ITPY AQV LL+ R +++ ++EV+TVDGFQG
Sbjct: 525 EEEAKKVLEVVKKLVKYKIPVS---VITPYDAQVRLLR--RMFEEEGLDVEVNTVDGFQG 579
Query: 562 REKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEY 621
RE EAI+IS VR+ K GFL D RR+NVA+TRA+R+ L+ + + D ++++
Sbjct: 580 RENEAIVISFVRT---KNFGFLKDYRRLNVAITRAKRKLILIGNENLLKKDTIYNEMLKW 636
>gi|444510151|gb|ELV09486.1| DNA-binding protein SMUBP-2 [Tupaia chinensis]
Length = 882
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 160/337 (47%), Positives = 219/337 (64%), Gaps = 17/337 (5%)
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS----RKLDNTSFD 371
KDK + + E++ L KE ++R++ A+ +++ +A VVL T TGA + + L FD
Sbjct: 168 KDKKEKGNFRNEIKLLRKELKEREEAAMLEILTSAKVVLATNTGASADGPLKLLPEGYFD 227
Query: 372 LVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
LVIIDE AQALE +CWI LL+ +CILAGDH QLPPT+ S A GL +L E L + Y
Sbjct: 228 LVIIDECAQALEASCWIPLLQARKCILAGDHKQLPPTIVSHRAALAGLSLSLMEHLVEEY 287
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLL 481
G + MLT QYRMH+ IM W+S+ +Y+ ++ AHPS GV T T LLL
Sbjct: 288 GAKAVRMLTTQYRMHQAIMQWASEAMYHGQLTAHPSVAGHLLRDLPGVATTEETGIPLLL 347
Query: 482 IDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKI 540
+D AGC + E + E+D S N GE + H + L+ +GV ASDI +ITPY QV LL+
Sbjct: 348 VDTAGCGLFELEQEDDQSKGNPGEVRLVGLHIQALVDAGVQASDIAVITPYNLQVDLLR- 406
Query: 541 LRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
+S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++ RR+NVA+TRARR
Sbjct: 407 -QSLSPRHPQLEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAITRARRHV 465
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+VCD+ TV++ FLK L++YF EH E + EYL++
Sbjct: 466 AVVCDSHTVNNHAFLKTLVDYFTEHGEVRTAFEYLDD 502
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 88/148 (59%), Gaps = 21/148 (14%)
Query: 109 LGQGVVYRLKDSSITVAFDDIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQ 164
L G++ R+ S+TVAFD+ + LN + RL KLAN+VTY+R+K K VQ
Sbjct: 28 LATGILTRITQKSVTVAFDESHDFQLNLGQENSYRLLKLANDVTYKRLK-------KEVQ 80
Query: 165 NGPAAGL--IPVLFGEQKPT--VLKKDI-AFKP-----FNSNLDHSQKDAISKALSSKNV 214
+ P + F + P L+ D AF N++LD SQK+A+S ALS K +
Sbjct: 81 HIPVCIIRSCQCPFWRKYPGGRELQADAGAFSADPLTFHNTSLDASQKEAVSFALSQKEL 140
Query: 215 FMLHGPPGTGKTTTVVEIILQEVKRGSK 242
++HGPPGTGKTTTVVEIILQ VK+G K
Sbjct: 141 AIIHGPPGTGKTTTVVEIILQAVKQGLK 168
>gi|284038257|ref|YP_003388187.1| ATPase AAA [Spirosoma linguale DSM 74]
gi|283817550|gb|ADB39388.1| AAA ATPase [Spirosoma linguale DSM 74]
Length = 632
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 198/541 (36%), Positives = 301/541 (55%), Gaps = 41/541 (7%)
Query: 122 ITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKP 181
IT+ D++P+ + L +E L ++ +Y M+ AL +L+ + LI VL G P
Sbjct: 106 ITLRVDELPDWSRDGKLGVEVLFDDNSYDEMEAAL-KLANSLAEKSDNRLINVLTGSTSP 164
Query: 182 TVLKKDIAFKPFNS-----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQE 236
T F P L+ SQ A+ K L++ + ++HGPPGTGKTTT+V+ I
Sbjct: 165 T-------FHPDTPPLSLPRLNPSQVAAVGKILTANELAIVHGPPGTGKTTTLVQAIKAL 217
Query: 237 VKRGSK-ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNS 295
K+ +K +L A SN AVD + E+L + ++R+G+PAR+ +++ LD +V
Sbjct: 218 HKQDNKKLLVVAPSNTAVDLLSEKLHDEGLSVLRVGNPARVSERLMALTLDHKVADHPAM 277
Query: 296 SLASDIRKEMKALNGKLLKTK------DKNTRREIQKELRTLSKEERKRQQLAVTDVIKN 349
A ++K+ K K +++ R+ + E + KE +Q + D++
Sbjct: 278 KEARKLKKQANEFKNMAHKYKRNFGKAERDQRKALFDEAHRIMKEVGNTEQYVIDDLVGK 337
Query: 350 ADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTV 409
A V+ TL GA + N ++ V+IDEA QALE ACWI +LK + +LAGDH QL PT+
Sbjct: 338 AQVITATLVGANHYTVRNLTYHTVVIDEAGQALEPACWIPILKAQKVVLAGDHCQLSPTI 397
Query: 410 QSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGV 469
+S EA +KGL TL E+ L+ E S+L QYRMHEHIM +SS+ Y +K+KAH S V
Sbjct: 398 KSAEAARKGLSHTLLEKCIKLH-PEAVSLLDEQYRMHEHIMGYSSQVFYKNKLKAHGS-V 455
Query: 470 KRTS--STEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLI------QSGVH 521
R S ++ L+ +D AGC +EK D ST N EA + M H +L+ + +
Sbjct: 456 ARHSLFDSDTALVFVDTAGCGFDEKLDGTSST-NPEEAALLMKHLTQLVTDLSTRYTKEN 514
Query: 522 ASDIGIITPYAAQVVLLKI-------LRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRS 574
I II+PY Q+ +LK L+ D++ V+T+D FQG+E++ + ISM RS
Sbjct: 515 FPTIAIISPYKQQINVLKDQLLHTPELQPYSDRIS---VNTIDSFQGQERDIVYISMTRS 571
Query: 575 NSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
N++ E+GFLSD RRMNVA+TRAR++ +V D+ T++ F I Y E+ Y S E+
Sbjct: 572 NAEGEIGFLSDIRRMNVAMTRARKKLVIVGDSATLAGLPFYADFIAYAEQLNAYQSAWEF 631
Query: 635 L 635
+
Sbjct: 632 M 632
>gi|284161290|ref|YP_003399913.1| DNA helicase [Archaeoglobus profundus DSM 5631]
gi|284011287|gb|ADB57240.1| DNA helicase [Archaeoglobus profundus DSM 5631]
Length = 636
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 234/674 (34%), Positives = 359/674 (53%), Gaps = 101/674 (14%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASIT-----SGASRNLDTAQKKGSTILNL--KCVDAQTG 67
L +F+ + L+++E+ A+I A + SG R L +G ILNL K V +
Sbjct: 4 LNDFIDKLKELVEIERRAQIEAMLNEIRFLSGEEREL-----RGRAILNLNGKVVGEE-- 56
Query: 68 LMGKTLLEFQSTKGDVLPAHKFGTHDVVVL---KPNKADLGSPALGQGVVYRLKDSSITV 124
G L+++ + D+V++ P K+DL GVV + I V
Sbjct: 57 -FGYKLVKYGRRRK---IETNINVGDLVLISRGNPLKSDL------VGVVAEKGNRYIVV 106
Query: 125 AFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVL 184
A +++P L +R++ AN+VT+RR + L L A + G +KP
Sbjct: 107 ALENVPSWALKD-VRIDLYANDVTFRRWIENLENLG-----NVALKALKFALGLEKPDEP 160
Query: 185 KKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKIL 244
+K F+P + L+ SQ++A++ AL S + F++HGP GTGKT T+ EI+ QEVKRG K+L
Sbjct: 161 EK-AYFEPVDERLNESQREAVALALGSNDFFLIHGPFGTGKTRTLAEIVRQEVKRGRKVL 219
Query: 245 ACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQV-----------LRGD 293
A A SNIAVDN+VE+L + +VRLGHP+R Q+ + L A+V LR
Sbjct: 220 ATAESNIAVDNLVEQL--RDLNIVRLGHPSR--TQLKSTTLSAKVVGHERYKDVEELRSR 275
Query: 294 NSSLA---SDIRKEMKALNGKL-------LKTKDKNTRREIQKELRTLSK--------EE 335
L + RK AL L L K + R K +R++++ EE
Sbjct: 276 AERLIKARAKFRKPTPALRRGLSDEEILELAEKKRGARGVSWKVIRSMAEWIKLNKLIEE 335
Query: 336 -----RKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIAL 390
R ++ +VI+ A+VVL T + A + + +FD+ +IDEA Q+ + I +
Sbjct: 336 LLNKARALEEEIAREVIEEAEVVLATNSTAFT---IDINFDVAVIDEATQSTIPSVLIPI 392
Query: 391 LKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIM 450
K + +LAGDH QLPPTV E L +TLFE L + Y E + ML +QYRM+E +M
Sbjct: 393 NKAEKFVLAGDHKQLPPTVLKAEE----LSKTLFEMLIEKY-PEHSKMLEIQYRMNEKLM 447
Query: 451 NWSSKQLYNSKIKAHPS-------GVKRTSSTE-----PTLLLIDIAGCDMEEKKDEEDS 498
+ +K+ Y K+KA S ++ S E L+ +D + C ++ + S
Sbjct: 448 EFPNKEFYGGKLKADESVRNITLADLRVESEDEIVNPRNVLIFLDTSKCPDRFERQRKGS 507
Query: 499 TMNEG--EAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTV 556
T E EA++ K+L+++GV IG+ITPY QV LL+ ++ ++EV+TV
Sbjct: 508 TSRENPLEAKIVTKIVKKLVRAGVKREWIGVITPYEDQVDLLR-------RMIDVEVNTV 560
Query: 557 DGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLK 616
DG+QGREKE IIIS VRSN + E+GFL D RR+NVA+TRA+R+ +V D++T+S+ +
Sbjct: 561 DGYQGREKEVIIISFVRSNRRGEIGFLEDLRRLNVALTRAKRKLIMVGDSKTLSTHETYR 620
Query: 617 RLIEYFEEHAEYLS 630
RLIE+ + +++S
Sbjct: 621 RLIEFIKREGKFVS 634
>gi|441501354|ref|ZP_20983473.1| putative helicase [Fulvivirga imtechensis AK7]
gi|441434890|gb|ELR68315.1| putative helicase [Fulvivirga imtechensis AK7]
Length = 641
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 193/537 (35%), Positives = 299/537 (55%), Gaps = 26/537 (4%)
Query: 118 KDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFG 177
+D +T+ DDIP+ + L ++ L +E YR M+ A+ +L K + L +L
Sbjct: 111 QDMLMTLNADDIPDWINDGQLGVQLLFDENAYREMEKAVKKLIK-TSDERLNELKEILLA 169
Query: 178 EQKPTVLKKDIAFKPFNS-NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQE 236
++ + KP S L+ SQ A++ LS+ +V ++HGPPGTGKTTT+++ IL+
Sbjct: 170 GREAQFR----SHKPVTSPGLNESQNKALNLVLSATDVAIIHGPPGTGKTTTLIQAILET 225
Query: 237 VKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSS 296
+K + L CA SN AVD + +RL V ++R+GHPAR+ + L LD ++ + +
Sbjct: 226 LKIEKQTLVCAPSNAAVDLLADRLGEQGVNVLRIGHPARVTEETLGKTLDVRITKHPDYK 285
Query: 297 LASDIRK---EMKALNGKL---LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNA 350
+RK E +++ K ++ R+ + E R L E +D+I +
Sbjct: 286 NLKALRKQAEEYRSMGKKYKRHFGYAEREQRKRLLTEARALYDEADHLSFYITSDIIAKS 345
Query: 351 DVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQ 410
V+ T+ GA S L F+ V +DEAAQALE A WI ++K R I AGDH QLPPT++
Sbjct: 346 QVIACTMVGANSAMLKGMHFNTVFMDEAAQALEPASWIPIIKADRVIFAGDHCQLPPTIK 405
Query: 411 SVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK 470
S EA + GL TLFE+ + ++ ML QYRM+ IMN+SS+ Y +++ A+ +
Sbjct: 406 SFEAARNGLEITLFEKA--IKQNQADVMLEEQYRMNMDIMNFSSRIFYKNRLVANQTVAH 463
Query: 471 -RTSSTEPTLLLIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQS------GVHA 522
+ + T+ ID AGC E D E S+ N EAE+ + H ++ I+
Sbjct: 464 WKIFEGDQTVEFIDTAGCGFFEDVDPETMSSFNTEEAELLLRHFRQYIEEIKALEKFEEV 523
Query: 523 SDIGIITPYAAQVVLLKILRSK---DDKLKN-MEVSTVDGFQGREKEAIIISMVRSNSKK 578
IGII PY AQV LL+ L + D++L N + V+TVD FQG+E++ I I++VRSN K
Sbjct: 524 ESIGIIAPYKAQVSLLQDLVQQSNFDEQLVNKLTVNTVDSFQGQERDIIYITLVRSNEKG 583
Query: 579 EVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
E+GFL++ RRMNVA+TRAR++ ++ D+ T+ + F ++Y E Y S E +
Sbjct: 584 EIGFLANTRRMNVAITRARKKLVIIGDSATIGQNEFYSAFLDYVNEIGAYRSAFELM 640
>gi|410099466|ref|ZP_11294437.1| hypothetical protein HMPREF1076_03615 [Parabacteroides goldsteinii
CL02T12C30]
gi|409218937|gb|EKN11903.1| hypothetical protein HMPREF1076_03615 [Parabacteroides goldsteinii
CL02T12C30]
Length = 647
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 189/508 (37%), Positives = 296/508 (58%), Gaps = 30/508 (5%)
Query: 132 EGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK 191
+ +NS L ++ +E +Y+ M +AL + K +N A L VL G + PT + +
Sbjct: 129 QNVNSELGVQLYFDETSYKTMFNALSGVMKA-KNNQLAHLRDVLLG-KTPTSRRNLFPVR 186
Query: 192 -PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASN 250
P+ L+ +Q++A++ LS+K V ++HGPPGTGKTTT+VE I + + R ++++ CA SN
Sbjct: 187 FPW---LNTTQEEAVNHVLSAKEVSIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSN 243
Query: 251 IAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG 310
AVD I E+LV + ++R+G+P R+ ++L + + + S IRK ++ +
Sbjct: 244 TAVDWISEKLVDRGINVLRIGNPTRVNDKMLSFTYERRFESHPDYSELWGIRKAIREIQS 303
Query: 311 KLLKTK--DKNTRREIQKELRTLSKEERKRQQLAV---TDVIKNADVVLTTLTGAVSRKL 365
K +K+T R LR + E L V D+ A V+ TL G+ +R L
Sbjct: 304 SFRKKSHSEKDTARNRLSRLRFRATE------LEVQIDADLFSEARVIACTLVGSANRVL 357
Query: 366 DNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFE 425
N +F + IDEAAQALE ACWIA+ K R ILAGDH QLPPT++ +EA + GL RTL +
Sbjct: 358 TNHNFTTLFIDEAAQALEAACWIAISKADRVILAGDHHQLPPTIKCIEATRGGLDRTLMQ 417
Query: 426 RLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDI 484
++A E S+L VQYRMHE IM +SS+ Y +++A P R + + ++ D
Sbjct: 418 KVA-AGKPETVSLLKVQYRMHEDIMRFSSRWFYQDELQAAPEVKYRGILAYDTPVVWFDT 476
Query: 485 AGCDMEEKK-DEEDSTMNEGEAEVAM----AHAKRLIQSGV--HASDIGIITPYAAQVVL 537
A CD EE + E S +N+ EAE+ + A+ +++ + V + D G+I+PY +QV
Sbjct: 477 ADCDFEEDQLSESQSRINKKEAELLVEQLQAYIEKISKERVLDESIDFGLISPYKSQVQY 536
Query: 538 LKILRSKDDKLKNME----VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAV 593
++ L ++ K V TVDGFQG+E++ I+IS+VR+N + +GFL+D RRMNVA+
Sbjct: 537 IRGLIKRNSFFKPFRKLITVHTVDGFQGQERDVIMISLVRANDQGNIGFLNDLRRMNVAI 596
Query: 594 TRARRQCCLVCDTETVSSDGFLKRLIEY 621
TRAR + ++ D T++ F + L +Y
Sbjct: 597 TRARMKLIILGDASTLTKHTFYRELYKY 624
>gi|388583945|gb|EIM24246.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 675
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 210/668 (31%), Positives = 344/668 (51%), Gaps = 99/668 (14%)
Query: 46 LDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLG 105
L+ ++K+ + +++K K LL ST+ H F D+ + K
Sbjct: 16 LEESRKEAISKISIKLTSFSVSFNSKLLLSLTSTE-----KHSFRNGDLAAIVNKK---- 66
Query: 106 SPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQN 165
+ L +G VY D I ++ + E L SP+ L +L +E TY ++ + + + ++
Sbjct: 67 NTQLLRGSVYSADDKRILISIEK-NEIDLPSPIYLTQLRDESTYTKLLEMIDKYEYLERS 125
Query: 166 GPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGK 225
+ L+ +FG +KPT ++ + + F+S L+ SQ+ A++ AL + ++ ++HGPPGTGK
Sbjct: 126 DDLSLLMKTIFGLRKPTFSQRAPS-EYFDSTLNQSQRHAVNLALKADHLALIHGPPGTGK 184
Query: 226 TTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESAL 285
+ T++EII Q + + +IL C +SN+A+DNI+ERL + + R+G+PAR+L + L
Sbjct: 185 SYTLIEIIRQFISQDKRILVCGSSNLAIDNILERLSVYNIPATRIGNPARILSNLQTQTL 244
Query: 286 DAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNT--RREIQKELRTLSKEERKRQQLAV 343
+ Q L+ + + + ++ E++ L +L + T R++ E++ L KE KR +
Sbjct: 245 EYQTLQSEENVIMKGVKLELEDLMKELKEGNITGTLERKKAMNEVKELRKEHSKRSMAVL 304
Query: 344 TDVIKNADVVLTTLTGAVSRKLDNT-SFDLVIIDEAAQALEIACWIALLKGSRCILAGDH 402
++K A +VL TL GA ++L+N FD+ IIDE+ QALE +C I +LK + ILAGD
Sbjct: 305 NRLMKRAKIVLCTLHGAGGKQLENQKKFDVCIIDESTQALEPSCLIPILKAKKLILAGDP 364
Query: 403 LQLPPTV-----QSVEAEKKGLGRT-------------LFERLADL-------------- 430
LQLPPTV Q VE + K +T + ++LA+L
Sbjct: 365 LQLPPTVLARPAQKVEGKTKEEKKTTIWKEQDIKEVEEITDKLAELKISEEGNATDREFK 424
Query: 431 -------------------------YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH 465
+G+ + +L+VQYRMH IM + S+ +YNS++ A
Sbjct: 425 QASTRATLKPLESLEASLFERLIDIHGNSIRCLLSVQYRMHNMIMKFPSETMYNSELTAC 484
Query: 466 PSGVKRTSSTEPT----------------LLLIDIAGCDMEEKKD---------EEDSTM 500
+ KRT P L+ ID G +E D + S
Sbjct: 485 EAVSKRTLMELPNVVNSNTNKDSVQLSSPLVFIDTDGHGCKESIDFKRLKKGALQRGSKY 544
Query: 501 NEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQ 560
NE E E+ + L+ GV S I IITPY AQVV L + + E+ ++DG Q
Sbjct: 545 NEKEIEIIKRKVQDLVHVGVRDSQIAIITPYQAQVVRLG--NAIKSQFPGCEIGSIDGVQ 602
Query: 561 GREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS-SDGFLKRLI 619
GRE+E +I+S+VRSN +VGFL + RR+NVA+TRARRQ +V D+ T+ + +LK+ +
Sbjct: 603 GREQEVVILSLVRSNYTGQVGFLKEGRRLNVAMTRARRQLIVVGDSATIKRGNSYLKKWM 662
Query: 620 EYFEEHAE 627
+ + +A+
Sbjct: 663 HFLKSNAD 670
>gi|304313994|ref|YP_003849141.1| DNA helicase [Methanothermobacter marburgensis str. Marburg]
gi|302587453|gb|ADL57828.1| predicted DNA helicase [Methanothermobacter marburgensis str.
Marburg]
Length = 654
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 223/669 (33%), Positives = 356/669 (53%), Gaps = 97/669 (14%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL- 73
++ ++ + L+++E+EAEI+A + + ++ G I GL GK
Sbjct: 1 MKSYIKRLIKLVEMEREAEINAMMNEIRRLSPQKRERVGRAI---------NGLNGKVTG 51
Query: 74 --LEFQSTK-GDVLPAH-KFGTHDVVVL---KPNKADLGSPALGQGVVYRLKDSSITVAF 126
L F K G P + D+V++ P ++DL +G + I VA
Sbjct: 52 RELGFHLVKYGRREPIDTQISVGDLVLISRGNPLRSDLTGTVAAKGKRF------IVVAL 105
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
+ +P L + +R++ AN++T++RM D L + V ++ L G++KP+ +
Sbjct: 106 ESVPRWALRN-VRVDLYANDITFQRMIDNLRGAGRNVFR-----VLRFLLGDEKPSG-HQ 158
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILAC 246
+ F+P + L+ SQ++AI +AL S + F++HGP GTGKT T+ E+I QEV+RG+++L
Sbjct: 159 IVEFEPVDPELNRSQREAIMRALGSDDFFLIHGPFGTGKTRTLHELIRQEVRRGNRVLVT 218
Query: 247 AASNIAVDNIVERLVPHRVRLVRLGHPARL----LPQVLESALD---------------- 286
A SN AVDN++E + H +R VRLGHP R+ L + L L+
Sbjct: 219 AESNAAVDNLLEGIAGH-LRCVRLGHPQRVSRTNLQETLAYKLENHPEYRRVLEYQERID 277
Query: 287 -------------AQVLRGDNSS---LASDIRKEMKALNGKLLKTKDKNTRREIQKELRT 330
Q+ RG S + + R+ + ++ ++ + + E+ +++
Sbjct: 278 GLIEERERHHKPTPQLRRGLTDSQIMINATKRRGARGISPNVMISMARWI--EVNQQIDE 335
Query: 331 LSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIAL 390
L ++ ++ + V +I+N+ VVL T + A +DN FD+ I+DEA+QA + I L
Sbjct: 336 LHRKMQEIEVEIVDRIIRNSQVVLATNSSAALEYIDNVKFDVAIVDEASQATIPSILIPL 395
Query: 391 LKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIM 450
+ R +LAGDH QLPPT+ + EA + L TLFE L Y E + ML QYRM+ IM
Sbjct: 396 SRAPRFVLAGDHRQLPPTILNPEASE--LEVTLFEELIGSY-PENSWMLNCQYRMNPAIM 452
Query: 451 NWSSKQLYNSKIKAHPS----GVKRTSSTE-------------PTLLLIDIAGCDMEEKK 493
+ +++ Y +I+AHPS V STE +L ID + E++
Sbjct: 453 EFPNREFYGGRIRAHPSLEEISVLDVISTEIPDSMPHRKLAERDPVLFIDTSKVGRGERR 512
Query: 494 DEEDSTM-NEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNME 552
+ +++ N EA++A+ A LI+ GV +IGIITPY QV L+ + +E
Sbjct: 513 LKGSTSIQNPLEADLAVIIAGALIRMGVKEEEIGIITPYDDQVDLIS-------SMTGVE 565
Query: 553 VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSD 612
V++VDGFQGRE+E IIISMVRSNS+ +GFL D RR+NV++TRARR+ ++ DT T+SS
Sbjct: 566 VNSVDGFQGREREVIIISMVRSNSEGNIGFLRDLRRLNVSLTRARRKLIIIGDTGTLSSH 625
Query: 613 GFLKRLIEY 621
+RLIEY
Sbjct: 626 PSYRRLIEY 634
>gi|224373108|ref|YP_002607480.1| putative DNA helicase [Nautilia profundicola AmH]
gi|223589915|gb|ACM93651.1| putative DNA helicase [Nautilia profundicola AmH]
Length = 648
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 223/676 (32%), Positives = 357/676 (52%), Gaps = 101/676 (14%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLE 75
+E+V LI+ E++AE + + + QK+G +L L+ +G+ L+
Sbjct: 8 KEYVDYFNELIEKERKAEKEFHLNEIKRLSGNERQKRGRAVLGLRM-----KFVGE-FLD 61
Query: 76 FQSTKGDV--LPAHKFGTHDVVVL---KPNKADLGSPALGQGVVYRLKDSSITVAFDDIP 130
F+ + + +P H+ D+V++ +P K + + G G K+ + + I
Sbjct: 62 FKIYRFNRNNMPDHQIKVGDIVLVSKGEPLKFNQEATVSGVG-----KNFIEVYSKEPIF 116
Query: 131 EEGLNSPLRLEKLANEVTYRRMKDALIQLSKG---VQNGPAAGLIPVLFGEQKPTVL--- 184
L RL+ N++T++RMK AL ++ G ++NG + VL G+++P V+
Sbjct: 117 RSKL---YRLDLFVNDITFKRMKKALNEVENGKWKMENG-----VDVLLGKKEPNVVEAQ 168
Query: 185 -KKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
K DI L+ SQ A+SK+++S +VF++HGPPGTGKTTT+ E+I + + G K+
Sbjct: 169 EKSDI--------LNDSQNIALSKSINS-DVFLIHGPPGTGKTTTLAEVIKKHI--GKKL 217
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L A SN+AVDN++E+L V VR+GHPA++ ++++ +LD ++ R I K
Sbjct: 218 LVSADSNVAVDNLLEKLKDFNV--VRIGHPAKMDSKLMKYSLDVRIRRDKRYKEIEKIIK 275
Query: 304 ---EMKALNGKLLKTKDKNTRR--------------------------------EIQKEL 328
++K L K K RR +IQK +
Sbjct: 276 KIDDLKYLQEKKYKKPTPGRRRGLSDEEILKYAKEGKGARGVLKEWMKEMAEWLKIQKNI 335
Query: 329 RTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWI 388
L E+ K+ Q + D+++NA +V T + L+ FD V IDEAAQA+E + I
Sbjct: 336 NKLFDEKNKKTQEIMDDILENAQIVFATNSACGGEFLEEREFDTVFIDEAAQAMEPSTLI 395
Query: 389 ALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEH 448
++KG + I AGDH QLPPT+ S + L +LFER ++LY V + L +QYRM+E
Sbjct: 396 PMIKGKQIIFAGDHKQLPPTILSNDER---LKVSLFERFSELYPKAVHT-LGIQYRMNEK 451
Query: 449 IMNWSSKQLYNSKIKAHPSGVKRTS-------------STEPTLLLIDIAGCDMEEKKDE 495
I + S + Y+ K+K + +K + EP ++ ID G ME+ K +
Sbjct: 452 INEFPSCKFYDCKVKTYEE-IKNITIKDLNIQPDSEYGDYEP-VVFIDTCGKFMEKSKKD 509
Query: 496 EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRS---KDDKLKNME 552
S N EAE ++ ++L+++G IGIITPY +K + S D +E
Sbjct: 510 SPSKYNPKEAEFVVSLVEKLLKNGAKEEHIGIITPYKDHEEYIKKVISSHLHDFTTSLLE 569
Query: 553 VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSD 612
V +VDGFQGREKE II+S+VR+N K+E+GFLSD RR+NVA+TRA+R+ ++ D +T+ +
Sbjct: 570 VKSVDGFQGREKEIIILSLVRANEKEEIGFLSDIRRLNVAITRAKRKLVIIGDAKTLLVN 629
Query: 613 GFLKRLIEYFEEHAEY 628
K LIEY +++ Y
Sbjct: 630 DTYKNLIEYIKKNGVY 645
>gi|312144201|ref|YP_003995647.1| DNA helicase [Halanaerobium hydrogeniformans]
gi|311904852|gb|ADQ15293.1| DNA helicase [Halanaerobium hydrogeniformans]
Length = 749
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 213/637 (33%), Positives = 331/637 (51%), Gaps = 69/637 (10%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEFQS-TKGDVLPAHKFGTHDVVVLKPNKADLGSPA 108
Q KG +L+L+ DA +G K L++F S G LP + T D+V++ NK P
Sbjct: 121 QAKGRAMLDLRGKDAGSGFGHKPLVKFSSKYSGKKLPETEITTGDLVMISLNKP--LHPD 178
Query: 109 LGQGVVYRLKDSSITVAFDDIPEEGLNSP-LRLEKLANEVTYRRMKDALIQLSKGVQNGP 167
G V SITVAFD P E + S +RL+ NE T+ RM AL ++ K QN
Sbjct: 179 NPTGTVAEKTSYSITVAFDKHPPEFIYSKGVRLDLFVNETTFDRMFSAL-EIVKKPQNEI 237
Query: 168 AAGLIPVLFGEQKPTVLKKDIAFKPFNSN-LDHSQKDAISKALSSKNVFMLHGPPGTGKT 226
+L +++ T + A +NS+ L+ SQ AI +L++++ +++ GPPGTGKT
Sbjct: 238 ETRKRDILLAKKEFT----NTAKISYNSDFLNQSQIKAIENSLAAEDFYLIQGPPGTGKT 293
Query: 227 TTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALD 286
T VE++L+ VK+G+K+L A SN AVDN++E L+ + +VR+GHP R+ ++ ++ LD
Sbjct: 294 VTAVELVLEAVKKGNKVLTTAGSNTAVDNLLELLIEKDLNVVRVGHPIRVNKKLRKNTLD 353
Query: 287 AQVLRGDNSSLASDIRKEMKAL----------NGKLLK-TKDKNTR----REIQKELRTL 331
+VL+ + A +R E+ L GK + D+ + R+I+ +R +
Sbjct: 354 DRVLKHHSYIEAEKLRDEVSDLINKQDSYIYPGGKYRRGLSDQEIKEYAERDIEHHVRGI 413
Query: 332 S---------------------KEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
S K+ K + AV D++ ADV+ +T A S L + F
Sbjct: 414 SPKVINEMASWLELQSKIDKYFKQIEKLENEAVEDILNKADVICSTNITAGSEILKDFHF 473
Query: 371 DLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
+L +IDEA Q+ + A I + +L GDH QLPPTV + +A K GL ++LFERL++
Sbjct: 474 NLSVIDEATQSTQPATLIPYFMADKSVLIGDHKQLPPTVINQQAAKGGLAKSLFERLSET 533
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS---------GVKRTSS------- 474
+ + S L +QYRM+ IM +SS Y+ ++A PS GV S
Sbjct: 534 HPTDALSTLKIQYRMNRKIMGFSSLNFYDGSLRAAPSVAQHNLGDLGVYPQSEKCFTEKA 593
Query: 475 --TEPTLLLIDIAGCDMEEKK-DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPY 531
E ++ +D + E+ +S N E+E+ + R + ++I +ITPY
Sbjct: 594 LKPEYPMVFLDTKEMEASERSLKASNSYDNPVESEIVLDILDRAAMLSMDENNIAVITPY 653
Query: 532 AAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNV 591
QV LL ++ + L +E+ TVD FQGREKE ++ S VRSN +GFL D RR+NV
Sbjct: 654 KDQVDLL----NQHNNLTEIEIDTVDAFQGREKEMVVFSAVRSNDDANIGFLRDLRRLNV 709
Query: 592 AVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEY 628
A+TRA+R+ + D+ T+ K L+ Y + Y
Sbjct: 710 ALTRAKRKIIFIGDSSTICQHQSYKNLLTYIKRVGLY 746
>gi|313674250|ref|YP_004052246.1| DNA helicase [Marivirga tractuosa DSM 4126]
gi|312940948|gb|ADR20138.1| DNA helicase [Marivirga tractuosa DSM 4126]
Length = 655
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 217/676 (32%), Positives = 351/676 (51%), Gaps = 100/676 (14%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
++ ++ + LI LE+++E+ + + + KG ILNL D+ TG+ G L
Sbjct: 6 NIDQYKNFFERLIQLERKSEMEFHLNEIMLLSAPQREAKGRAILNLSGKDSGTGIGGVYL 65
Query: 74 LEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEE- 132
++ +G LP ++ DVV++ +K S Q V SIT+A++ P
Sbjct: 66 VKL--VRGSGLPDNEISNGDVVIISKDKP---SGKEEQATVVSKTKRSITIAYNKTPPYL 120
Query: 133 --GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVL----------FGEQK 180
G N LRL+ +N++T++RM DA+ L + +P+L F E +
Sbjct: 121 VYGRN--LRLDLYSNDITFQRMLDAIEDLKR----------LPILQEYIKSNIDLFEENE 168
Query: 181 PTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG 240
T K+ +F+ NL+ Q++ I++AL + ++F++HGPPGTGKTTT+ +I + G
Sbjct: 169 NT---KNHSFQ--QQNLNSKQQEIINQALVTNDIFLIHGPPGTGKTTTLSYLIKSLFEGG 223
Query: 241 SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
K+L A SN AVDNI+E+L + R+G+P R+ +L +LD Q+ + A+
Sbjct: 224 KKVLVTAPSNTAVDNILEKLQNLEIPSTRIGNPIRMDENLLNLSLDVQLQDHPDYQQANG 283
Query: 301 IRKEMKAL-------------------NGKLLK-TKDKNTRREIQK-ELRTLSKEERKRQ 339
I ++ L + K+++ K R IQ +LR ++K + +Q
Sbjct: 284 IWNAIQVLKKEQNEYIPASGQNRRGLSDNKIIQLASSKKPYRGIQSAKLRKMAKWIKIQQ 343
Query: 340 QL-------------AVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIAC 386
Q+ A+ +++ + V+ T + A S L + FD+V IDEA Q+ E
Sbjct: 344 QINKNYEQAQALQLSAIESILEQSPVICATNSSAGSELLKDIIFDVVCIDEATQSTEPEA 403
Query: 387 WIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMH 446
I L+KG + +LAGDH QLPPTV+S EA L +LFER +++LT+QYRMH
Sbjct: 404 LIPLVKGRKWVLAGDHQQLPPTVKSSEAS--DLSISLFERFQKELPANRSNILTIQYRMH 461
Query: 447 EHIMNWSSKQLYNSKIKAHPS--------------------GVKRTSSTEPTLLLIDIAG 486
+ IM +S++ Y K+KAHPS +++ + P ++ +
Sbjct: 462 QEIMRFSNENFYQKKLKAHPSVAKHSLADLPGFDPFPYVNPALEKVVQSSPAVVFVP--- 518
Query: 487 CD--MEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSK 544
C+ +EE+ + S N+ E + L+ S + DIGII+PY QV LK
Sbjct: 519 CEQGVEEQLADSHSWFNKAEIALTKEITDALLSSRLFPEDIGIISPYDQQVSRLK----S 574
Query: 545 DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
D K ++E+ ++DGFQGREKE IIIS+VRSN K+++GFL D RR+NVA+TRA+R+ ++
Sbjct: 575 DLKDYHVEIKSIDGFQGREKEVIIISLVRSNLKEDIGFLRDYRRLNVALTRAKRKLIIIG 634
Query: 605 DTETVSSDGFLKRLIE 620
T+ S+ K LI+
Sbjct: 635 SPFTLQSNPIYKSLIK 650
>gi|240102675|ref|YP_002958984.1| UvrD type DNA helicase [Thermococcus gammatolerans EJ3]
gi|239910229|gb|ACS33120.1| DNA helicase, putative [Thermococcus gammatolerans EJ3]
Length = 660
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 224/679 (32%), Positives = 361/679 (53%), Gaps = 94/679 (13%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNL--KCVDAQTGLMGKT 72
L +F++ + L+++E++AEI A + +K G IL L K + + G
Sbjct: 7 LSKFIAKLKVLVEMERKAEIEAMRAEMRRLSGREREKVGRAILGLNGKVIGEELGYFLVR 66
Query: 73 LLEFQSTKGDVLPAHKFGTHDVVVLK---PNKADLGSPALGQGVVYRLKDSSITVAFDDI 129
+ K ++ D++V+ P K+DL + +G + ITVA + +
Sbjct: 67 YGREREIKTEI------SVGDLIVISKRDPLKSDLVGTVVEKGKRF------ITVALETV 114
Query: 130 PEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIA 189
PE L +R++ AN++T++R + + L ++G A + G + +++
Sbjct: 115 PEWALRG-VRVDLYANDITFKRWLENIEALR---ESGRKA--LEFYLG-LREPEESEEVE 167
Query: 190 FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAAS 249
F PF+ +L+ SQ+ AI++AL S + F++HGP GTGKT T+VE+I QEV RG ++LA A S
Sbjct: 168 FNPFDRSLNASQRRAIARALGSPDFFLIHGPFGTGKTRTLVELIRQEVARGHRVLATAES 227
Query: 250 NIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALN 309
N+AVDNIVERLV +++VR+GHP+R+ + E+ L A ++ L ++R E++ +
Sbjct: 228 NVAVDNIVERLVDSGLKVVRVGHPSRVSKALHETTL-AYLM--TQHELYGELR-ELRVIG 283
Query: 310 GKLLKTKDKNTR--------------------------------RE------IQKELRTL 331
L + +D T+ RE I ++++
Sbjct: 284 ENLKEKRDTFTKPAPKYRRGLTDKQILRLAERGIGTRGVPARLIREMAQWLKINEQVQKT 343
Query: 332 SKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL 391
+ RK ++ ++I+ A+VVLTT + A +D S+D+ IIDEA QA + I +
Sbjct: 344 FDDARKLEERIAREIIREANVVLTTNSSAGLEVVDYGSYDVAIIDEATQATIPSVLIPIN 403
Query: 392 KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN 451
+ R +LAGDH QLPPT+ S A K L +TLFE L + Y + + MLTVQYRM+E +M
Sbjct: 404 RARRFVLAGDHKQLPPTILSERA--KELSKTLFEGLIERYPWK-SEMLTVQYRMNERLME 460
Query: 452 WSSKQLYNSKIKAHPS---------GVK---------RTSSTEPTLLLIDIAGCD--MEE 491
+ S++ YN +IKA S GV+ E L+ +D A + E
Sbjct: 461 FPSREFYNGRIKADESVRNITLADLGVELPKGDDVWAEVLKPENVLVFVDTAKREDRFER 520
Query: 492 KKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNM 551
++ +S N EA + + L++ G+ +G+ITPY Q L+ L ++ +
Sbjct: 521 QRYGSESRENPLEARLVEEAVEGLLKLGIKPEWVGVITPYDDQRDLISSLLPEE-----I 575
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
EV TVDG+QGREKE I++S VRSN K E+GFL D RR+NV++TRA+R+ L+ D+ T+SS
Sbjct: 576 EVKTVDGYQGREKEVIVLSFVRSNRKGELGFLKDLRRLNVSLTRAKRKLILIGDSSTLSS 635
Query: 612 DGFLKRLIEYFEEHAEYLS 630
KRL+E+ + Y+S
Sbjct: 636 HPTYKRLVEFVRKRETYVS 654
>gi|256421450|ref|YP_003122103.1| ATPase AAA [Chitinophaga pinensis DSM 2588]
gi|256036358|gb|ACU59902.1| AAA ATPase [Chitinophaga pinensis DSM 2588]
Length = 635
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 191/537 (35%), Positives = 296/537 (55%), Gaps = 30/537 (5%)
Query: 122 ITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKP 181
IT+ D++PE N L ++ L ++ +Y M++AL Q + G LI VL GE+ P
Sbjct: 106 ITLRTDELPEWANNGKLGIDLLFDDNSYDEMQNALKQADTLAEKGENDHLIRVLTGEKSP 165
Query: 182 TVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS 241
D L+ SQ+ A+++ L++ ++ ++HGPPGTGKTTT+V+ I +K+ +
Sbjct: 166 GF--HDNLPPVIIPRLNASQQHAVNRILAANDLAIVHGPPGTGKTTTLVQAIKALIKQDN 223
Query: 242 K-ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
K IL A SN AVD + E+L + ++R+G+PAR+ ++ LD+++ +
Sbjct: 224 KQILVVAPSNTAVDLLSEKLSEEGLNVLRVGNPARVSERLSSLTLDSRMTEHASMKEIKR 283
Query: 301 IRKEMKALNGKLLKTK------DKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVL 354
++K+ K K ++ R+ + E R + K +Q + D++ A ++
Sbjct: 284 LKKQANEFRDMAHKYKRNFGKAEREQRKALFDEARNIMKSVENTEQYIMDDLMAKAQIIT 343
Query: 355 TTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA 414
TL GA + + ++IDEA QALE ACWI +LK + ILAGDH QL PTV+S EA
Sbjct: 344 ATLVGANHYTVRKLKYHTIVIDEAGQALEPACWIPILKAQKVILAGDHCQLSPTVKSDEA 403
Query: 415 EKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT-S 473
+KGL TL E+ L+ + V +L QYRMHE IM +SS Y K+KAH S T
Sbjct: 404 ARKGLSTTLLEKCIALHPESVV-LLEEQYRMHEMIMGYSSAVFYADKLKAHASVAAHTLF 462
Query: 474 STEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHAS-------DIG 526
+ L +D AGC +EK E ST N EA H ++ + +G+H I
Sbjct: 463 PDDMPLSFVDTAGCGFDEKT-EGTSTTNPEEAAFLFKHLRQFV-TGLHTHYQPQQFPSIA 520
Query: 527 IITPYAAQVVLLK-------ILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKE 579
II+PY Q+ +LK L++ D++ V+T+D FQG+E++ + ISM RSN+ +
Sbjct: 521 IISPYKQQIHILKEQLLSVPELQAYGDRIS---VNTIDSFQGQERDIVYISMTRSNNDNK 577
Query: 580 VGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLN 636
+GFLSD RRMNVA+TRAR++ ++ D+ T+S F I Y E+ Y S E+++
Sbjct: 578 IGFLSDIRRMNVAMTRARKKLVIIGDSATLSQLPFYAGFIAYAEQQNAYQSAWEFMD 634
>gi|338210831|ref|YP_004654880.1| type III restriction protein res subunit [Runella slithyformis DSM
19594]
gi|336304646|gb|AEI47748.1| type III restriction protein res subunit [Runella slithyformis DSM
19594]
Length = 636
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 210/575 (36%), Positives = 309/575 (53%), Gaps = 38/575 (6%)
Query: 84 LPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKL 143
+PA F HD K D + RLK IT+ D++PE + L ++ L
Sbjct: 77 MPAVFFCNHDA------KNDRVEGTITHQNGNRLK---ITLRTDELPEWSRDGKLGIDVL 127
Query: 144 ANEVTYRRMKDALIQ----LSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNS--NL 197
++ +Y M+ AL Q L K N PA L +L GE+KPT ++ PF S +L
Sbjct: 128 FDDNSYEEMQSALKQAMAVLEKST-NEPATRLAAILTGEKKPTFKEQ----APFYSTPSL 182
Query: 198 DHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNI 256
+ SQ+ A+ L + + ++HGPPGTGKTTT+V+ I VK K+L A SN AVD +
Sbjct: 183 NPSQQSAVDSILRANELAVVHGPPGTGKTTTLVQAIKALVKTENQKVLVVAPSNTAVDLL 242
Query: 257 VERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK---EMKALNGKLL 313
E+L + ++R+G+PAR+ ++ LD+++ A ++K E+KA+ K
Sbjct: 243 SEKLHEEGLNVLRVGNPARVTERLTALTLDSKMAEHPYMKEAKRLKKQAQELKAMAHKYK 302
Query: 314 KT---KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
++ +++ R+ + E + KE +Q + D++ A VV TL G+ + +
Sbjct: 303 RSFGKSERDQRKLLFVEAHRIMKEVGNTEQYIIDDLLVKAQVVTATLVGSNHYTVREVRY 362
Query: 371 DLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDEA QALE ACWI +LK + ILAGDH QL PT++S A K GL TL E+ D
Sbjct: 363 HTVVIDEAGQALEPACWIPVLKAQKVILAGDHCQLSPTIKSEVAAKGGLSTTLLEKCVDA 422
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST-EPTLLLIDIAGCDM 489
+ + VT +L QYRM+E IM +SS+ Y K+KAH S R T + +L ID AGC
Sbjct: 423 HPEAVT-LLEEQYRMNEQIMGYSSQIFYQHKLKAHASVAHRVLFTDDKPVLFIDTAGCGF 481
Query: 490 EEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD-----IGIITPYAAQVVLLKILRSK 544
EEK + ST E A + + +D I II PY Q+ +L S
Sbjct: 482 EEKLEGTSSTNPEEAALLLKHLGLLTAEWEAQKTDTSFPSIAIIAPYKQQIHVLAEQLSH 541
Query: 545 DDKLK----NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
+L+ +M V+TVD FQG+E++ + ISM RSNS+ +GFL+D RRMNVA+TRAR++
Sbjct: 542 VPELQPYLAHMAVNTVDSFQGQERDVVYISMTRSNSEGSIGFLADIRRMNVAMTRARKKL 601
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
+V D+ T++ F I Y E YLS E +
Sbjct: 602 VVVGDSATLAQFPFYADFISYAERLDAYLSAWELI 636
>gi|336397671|ref|ZP_08578471.1| AAA ATPase [Prevotella multisaccharivorax DSM 17128]
gi|336067407|gb|EGN56041.1| AAA ATPase [Prevotella multisaccharivorax DSM 17128]
Length = 642
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 187/514 (36%), Positives = 304/514 (59%), Gaps = 38/514 (7%)
Query: 132 EGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK 191
+G++ PL ++ +E +YR M DAL ++ ++G A L + + + ++ F
Sbjct: 132 QGVDRPLGVQLSFDETSYRTMFDALDRVIHA-KSGRLAYLRELFYTK----MVAGRFTFA 186
Query: 192 PFN-SNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASN 250
P + L+ +Q+ A+++ L +K+V ++HGPPGTGKTTT+VE I + + R S++L CA SN
Sbjct: 187 PMSFPWLNETQERAVNEVLRAKDVAVVHGPPGTGKTTTLVEAINETLMRESQVLVCAQSN 246
Query: 251 IAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG 310
+AVD I E+LV + ++R+G+P R+ ++L + + + S IRK ++ L
Sbjct: 247 MAVDWICEKLVDRGINVLRIGNPTRVNDKMLGFTYERRFEAHPDYSQLWAIRKAIRELR- 305
Query: 311 KLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
+ K +D N +++++ L++ + E R ++ A V+ +TL G+ +R L+ F
Sbjct: 306 RRKKGRDDNFHQKLER-LKSRATELEIRIN---AELFGEARVIASTLVGSANRLLEGQKF 361
Query: 371 DLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
+ IDEAAQALE ACWI + + SR ILAGDH QLPPTV+S+ A K GLG+TL ER+ +
Sbjct: 362 GTLFIDEAAQALEAACWIPIRRVSRVILAGDHCQLPPTVKSIAALKGGLGKTLMERIVE- 420
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS--STEPTLLLIDIAGCD 488
E ++L VQYRM+E IM +SS Y +++ P ++R S + + +L +D +
Sbjct: 421 NKPECVTLLGVQYRMNEEIMRFSSDWFYGGRVRTAPEILQRKSILNLDRPILWLDTGQIE 480
Query: 489 M--------EEKKDEEDSTMNEGEAEVAMAHAK---------RLIQSGVHASDIGIITPY 531
M E+ E +N+GEAE+ ++ + R++ + D+G+I+PY
Sbjct: 481 MGPDEPSNKEQFIGESFGRVNKGEAELTLSSLQAYFTKIGKERILDERI---DVGVISPY 537
Query: 532 AAQVVLLKILRSKDDKLKN----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
AQV L+ L K + K + V+TVDGFQG+E++ I+ISMVR+N E+GFL D R
Sbjct: 538 RAQVQYLRSLVRKREFFKPYRRLITVNTVDGFQGQERDIILISMVRANENGEIGFLHDLR 597
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEY 621
RMNVA+TRAR + ++ D +T++ F K+L EY
Sbjct: 598 RMNVAITRARMKLIILGDVQTLARHPFYKKLWEY 631
>gi|222099668|ref|YP_002534236.1| DNA helicase [Thermotoga neapolitana DSM 4359]
gi|221572058|gb|ACM22870.1| DNA helicase [Thermotoga neapolitana DSM 4359]
Length = 650
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 228/683 (33%), Positives = 352/683 (51%), Gaps = 101/683 (14%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNL--KCVDAQTGLMG 70
+++ +FV + L++LE+ AEISA + + + +KKG IL L K V + +G
Sbjct: 1 MTVHQFVKKLIKLVELERNAEISAMLDEIKRLSGEEREKKGRAILGLTGKFVGEE---LG 57
Query: 71 KTLLEFQSTKGDVLPAHKFGTHDVVVLK---PNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ F K + G D+V++ P K+D + +G + ITVA D
Sbjct: 58 YFFVRFGRRKE---IDTEIGVGDLVLISKGTPLKSDYTGTVVEKGTRF------ITVAVD 108
Query: 128 DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKD 187
+P L + +R++ A+++T+RR + L+ LS + L G ++ +
Sbjct: 109 RLPPWKLKN-VRIDLFASDITFRRQIENLMGLSP-----EGKRCLEFLLG-KREPEESVE 161
Query: 188 IAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACA 247
F PF+ L+ SQ++A+S AL S + F++HGP GTGKT T+VE I QE RG K+L A
Sbjct: 162 EEFVPFDEGLNESQREAVSLALGSSDFFLIHGPFGTGKTRTLVEYIRQETARGRKLLVTA 221
Query: 248 ASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKA 307
SN+AVDN+VERL V LVR+GHP+R+ P + ES L Q+ D + KEMK
Sbjct: 222 ESNLAVDNLVERLWGS-VSLVRIGHPSRVSPHLKESTLAHQIETHDEYTKV----KEMKE 276
Query: 308 LNGKLLKTKDKNTRREIQ-----------------------------------------K 326
KL++ +D+ T+ Q +
Sbjct: 277 NLSKLIEKRDRFTKPSPQWRRGLSDEKILEYAEKNWSARGVPKERIKEMAEWIKLNNQIQ 336
Query: 327 ELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIAC 386
E+R L +E +++ +++ A VVL+T + A + FD+V++DEA+QA +
Sbjct: 337 EMRELIEE---KEEAIARSIVRKAQVVLSTNSSAALDIVSGILFDVVVVDEASQATIPSI 393
Query: 387 WIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMH 446
I + +G + +LAGDH QLPPT+ S EA + L RTLFE L LY E + +L QYRM+
Sbjct: 394 LIPISRGKKFVLAGDHKQLPPTILSEEA--RDLSRTLFEELIRLY-PEKSVLLDTQYRMN 450
Query: 447 EHIMNWSSKQLYNSKIKAHPS---------GVKRTS---------STEPTLLLIDIAGCD 488
E +M + S++ Y+ K+KA S GV+ + S + L+ +D
Sbjct: 451 EILMEFPSREFYDGKLKADDSVKNITLLDLGVESPNFDKLWDVILSPKNVLVFVDTRNRP 510
Query: 489 --MEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDD 546
E ++ + S N EA + ++LI GV IG+ITPY QV L++ L +
Sbjct: 511 DRFERQRKDSPSRENPLEARLVKEIVEKLISMGVKEEWIGVITPYDDQVDLVRTLLEE-- 568
Query: 547 KLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 606
+EV +VDGFQGREKE IIIS VRSN E+GFL D RR+NV++TRA+R+ + D+
Sbjct: 569 ---KVEVHSVDGFQGREKEVIIISFVRSNKNGEIGFLEDLRRLNVSLTRAKRKLIAIGDS 625
Query: 607 ETVSSDGFLKRLIEYFEEHAEYL 629
T+S +R +E+ + Y+
Sbjct: 626 STLSVHPTYRRFVEFARKKGTYV 648
>gi|401408961|ref|XP_003883929.1| putative DNA-binding protein [Neospora caninum Liverpool]
gi|325118346|emb|CBZ53897.1| putative DNA-binding protein [Neospora caninum Liverpool]
Length = 1311
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 249/848 (29%), Positives = 371/848 (43%), Gaps = 253/848 (29%)
Query: 13 VSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
+L V + L+ E AE ++ S +L + +G + L ++GL +T
Sbjct: 2 TALDRLVDLHQKLLKYEHAAETEELESALKSLSLSELEAQGVVLPRLVVHQVRSGLYSRT 61
Query: 73 LLEFQSTKGD-------------------------VLPAHKFGTHDVVVLKPN----KAD 103
L++F + + + P H+F D+V L +A
Sbjct: 62 LVDFCTRRASQAFQERQKKAGPADAEDGAASDASLLPPQHRFTPGDIVGLFDEVHALQAA 121
Query: 104 LGSPALGQGVVYRLKDSSITVAFDD-------------------IPEEGLNSPLRLEKLA 144
AL GVV++++ I++AF+D +EG +S L ++
Sbjct: 122 GSKGALASGVVHKVRAQVISIAFEDDDWVSSSDKANRGASGGKGREDEGRSS-FHLALIS 180
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK------------------- 185
+ VT R AL +L NGPA L+ + FG Q+P L
Sbjct: 181 SSVTIERQLKALDRLKNYAPNGPAQTLLNLCFGFQQPQPLAPAPQQDTGASDPAAGSSEC 240
Query: 186 ------KDIA------------------FKPFNSNLDHSQKDAISKALSSKNVFMLHGPP 221
D A F F L SQK A+ L S+++ ++HGPP
Sbjct: 241 ADGLQTSDFAAGSHSLPSVSLDLSRCGDFPWFCPTLTVSQKRAVLLGLRSRDLALIHGPP 300
Query: 222 GTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERL------------------VPH 263
GTGK+T ++E++LQ RG ++LACA SN+AVDN++ER+ +
Sbjct: 301 GTGKSTALLELLLQLASRGCRVLACAPSNVAVDNLLERIAAFAEPSATPSASGAALRLAS 360
Query: 264 RVR-LVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTR- 321
R+R VRLGHPAR+ + L++Q+ R + ++L+ +IR+E+ LN ++LK + K R
Sbjct: 361 RLRKCVRLGHPARVDENLARFCLESQLQRSEGAALSREIRRELD-LNLEMLKDRKKLERH 419
Query: 322 --------------------------------REIQKELRTLSKEERKRQQLAVTDVIKN 349
RE+++E+RTL KE R ++ AV +V++
Sbjct: 420 VERRRVETAGEASANDDGARPGASRSAWSLAKRELREEIRTLRKELRAFERKAVEEVLEQ 479
Query: 350 ADVVLTTLTGAVSRKL--------------DNTSFDLVIIDEAAQA-------------- 381
+V T GA L FD+V+IDEAAQA
Sbjct: 480 CPIVFATCAGADDETLRQFFGNGDTSASQPGRNGFDVVVIDEAAQASSGFFSLTSPLPFP 539
Query: 382 -------------LEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFER-L 427
LE CWI LL G R +LAGDH QL PT++S AE+ GLG TLFER +
Sbjct: 540 VVCAVLSDRVAPALEAVCWIPLLYGHRAVLAGDHCQLAPTIKSRAAERGGLGITLFERQM 599
Query: 428 ADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH---------------------- 465
+G ++ +L Q+RMH IM+WS++Q Y +++A
Sbjct: 600 QAAHGSRISQLLDTQFRMHRTIMDWSNEQFYKGELRADESVASRLLEDKYPRLRDETSGK 659
Query: 466 --PSGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTM---------------NEGEAEVA 508
P G ++S P L ID AG E+ +ED ++ N GEA +
Sbjct: 660 RPPEGEVPSASVAPPFLWIDTAGVSWLEEDGQEDPSLLRNGPVSARVHASKSNRGEAALL 719
Query: 509 MAHAKRLIQS-GVHASDIGIITPYAAQV-VLLKILRSKDD-------------------- 546
+ + L+ + GV A DI +ITPY QV VL + LR D
Sbjct: 720 VKRLQELVWNFGVDAEDICVITPYRQQVQVLRQFLREAADAEPSPASVAGARGEEAERET 779
Query: 547 -----KLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
+ V+TVDGFQG+E E + IS+VRSN + EVGFL D RR+NVAVTRA+R
Sbjct: 780 RRLRQSFARIPVNTVDGFQGKEGEVVAISLVRSNPRHEVGFLKDVRRLNVAVTRAKRHLL 839
Query: 602 LVCDTETV 609
+V D+ET+
Sbjct: 840 IVGDSETI 847
>gi|343085505|ref|YP_004774800.1| ATPase AAA [Cyclobacterium marinum DSM 745]
gi|342354039|gb|AEL26569.1| AAA ATPase [Cyclobacterium marinum DSM 745]
Length = 641
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 196/579 (33%), Positives = 316/579 (54%), Gaps = 32/579 (5%)
Query: 82 DVLPAHKFGTHDVVVLKPN--KADLGSPALGQGVVYRLKDSSITVAFDD--IPEEGLNSP 137
+ L H F + + L N + D+ + L GVV +K + +T++ + +P+
Sbjct: 69 EALSNHGFHSGKSISLFSNAEENDIQTTFL-NGVVNNVKGNVMTLSLNTERLPDWVGEGG 127
Query: 138 LRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNL 197
+ + + ++ TY+ M A+ ++ +N A L V+ G +KP L ++ L
Sbjct: 128 IGVNLMFDDTTYKVMTSAMESVTAS-ENNRLAHLKEVILGHKKPYFLARETGSAGL---L 183
Query: 198 DHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIV 257
+ Q A+ +K++ ++HGPPGTGKTTT+++ I+ + ++L CA SN AVD +V
Sbjct: 184 NAGQNKALELIEQAKDLAIVHGPPGTGKTTTLIQAIVSATQIYDQVLVCAPSNAAVDLLV 243
Query: 258 ERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK- 316
ER+ + ++R+GHPAR+ ++++ LDA++L + +RKE + K K K
Sbjct: 244 ERMGDENLEVLRIGHPARIDDKIIQRTLDAKILAHPSYKAYKKLRKEAEEYRRKANKFKR 303
Query: 317 -----DKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
++ R+ E E R+ ++ + V+ TL GA S L +F
Sbjct: 304 NFGHAEREKRKMHYNEAGKCQAEARQLYDYMTHSILDSCQVIACTLVGAASNLLKGKTFQ 363
Query: 372 LVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
+V +DEAAQ LE A WI ++K + + AGDH QLPPT++S EA KGL TLFE+ A
Sbjct: 364 VVFLDEAAQGLEPATWIPIMKAQKVVFAGDHCQLPPTIKSREA-AKGLQNTLFEK-AITN 421
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT-SSTEPTLLLIDIAGCDME 490
E +L+VQYRM E IM +S+ YN+K+ A + K + E TL ID AG
Sbjct: 422 QPEAAQILSVQYRMAEAIMGFSNIAFYNNKLIAAANTQKHYLAEGEATLAFIDTAGSGFL 481
Query: 491 EKKDEED-STMNEGEAEVAMAHAKRLI------QSGVHASDIGIITPYAAQVVLLKILRS 543
E KD E S N+ EA + + K L+ S A +G+I PY+AQV LLK + +
Sbjct: 482 EFKDRETLSISNKEEAFMLLTLLKDLLKRIGKNNSENQAWQVGLIAPYSAQVRLLKEMVA 541
Query: 544 KDDKL-------KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
D + +N+ +STVDGFQG+E++ I+IS+ RSN + E+GFL+D RRMNVA+TRA
Sbjct: 542 MDSEWIFLKQLDQNLTISTVDGFQGQERDIILISLTRSNEQGEIGFLADTRRMNVALTRA 601
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
+R+ ++ D+ T+ ++GF + +++ Y S E++
Sbjct: 602 KRKLIVLGDSATIGNNGFYQSFLDFVHAKGAYHSVYEFM 640
>gi|222445377|ref|ZP_03607892.1| hypothetical protein METSMIALI_01005 [Methanobrevibacter smithii
DSM 2375]
gi|222434942|gb|EEE42107.1| putative DNA helicase [Methanobrevibacter smithii DSM 2375]
Length = 658
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 215/677 (31%), Positives = 365/677 (53%), Gaps = 102/677 (15%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKK--GSTILNLKCVDAQTGLMGKT 72
+++++ + LI+ E++AEI + + +NL +++ G I +K L G
Sbjct: 1 MKKYIKQLIKLINYERDAEIE--LMTNEIKNLSPKKRESLGRAINKVKGKYLGKQL-GSQ 57
Query: 73 LLEF-QSTKGDVLPAHKFGTHDVVVLK---PNKADLGSPALGQGVVYRLKDSSITVAFD- 127
+++F +S K + + D+V++ P ++DL + +G + I VAF+
Sbjct: 58 IVQFGRSEKIET----EISVGDMVLISTGYPLRSDLTGTVVEKGARF------IKVAFEK 107
Query: 128 DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKD 187
IP+ L +R++ AN+VT+RRM+D L+ L+ +N L ++ P KK+
Sbjct: 108 SIPKWTLKKKVRIDLYANDVTFRRMEDNLMHLNTKGKNALEYSL-----KKRAPKENKKE 162
Query: 188 IAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACA 247
+ +L+ SQK+A+ A++++N F++HGP GTGKT T+VE+I QEV++ +K+L A
Sbjct: 163 KYIDFIDKSLNESQKNAVRNAVNTENFFLIHGPFGTGKTRTLVELIQQEVRQSNKVLVTA 222
Query: 248 ASNIAVDNIVERLVPHR-VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
SN AVDNI++RL ++ +++ RLGHP R+ + + +L + +N L I K K
Sbjct: 223 ESNSAVDNILDRLSQNKKLKITRLGHPQRVSKENIAYSL---AYKAENHQLTGKINKNYK 279
Query: 307 ALNGKLLKTKDKNTRREIQ--------------------------------------KEL 328
+ ++ +T+D+ T+ Q +++
Sbjct: 280 RIE-QISETRDRFTKPTPQYRRGFSDSDILYNASKGKGGRGISSSKMESMANWLLENEKI 338
Query: 329 RTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWI 388
+ + +K + V D+I ++D++L+T + A ++ T F++VI+DEA+QA + I
Sbjct: 339 SEIHYKIKKLENKIVKDIINSSDIILSTNSTAAIEEIARTKFNVVIVDEASQATIPSILI 398
Query: 389 ALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEH 448
L K R ILAGDH QLPPT+ S +A L +TLFE L Y ++ +S+L VQYRM+
Sbjct: 399 PLSKARRFILAGDHKQLPPTIISKKAH--FLEKTLFEELIKKYPNK-SSLLNVQYRMNSF 455
Query: 449 IMNWSSKQLYNSKIKAHPSG----------------------VKRTSSTEPTLLLIDIAG 486
+M + + + YN +K+ S K+ + LL ID +
Sbjct: 456 LMKFPNSEFYNGNLKSDSSVDDINLDEIIDLEELSRLKESDVEKQLHNNLKPLLFIDTSN 515
Query: 487 CDMEEKKDEEDS--TMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSK 544
E+K +DS +N+ EA++A + AK + +G++ DIGII+PYA QV L++
Sbjct: 516 LKNNEEKHLKDSKSIINQSEADIATSIAKFYLGTGINPKDIGIISPYADQVNLIQ----- 570
Query: 545 DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
DK+ +EV +VDGFQGREKE IIIS VRSN K++GFL D RR+NVA+TRA+R+ ++
Sbjct: 571 -DKIP-IEVKSVDGFQGREKEIIIISTVRSNKNKDIGFLKDLRRLNVAITRAKRKLIVIG 628
Query: 605 DTETVSSDGFLKRLIEY 621
+ T+ + +LI++
Sbjct: 629 NKNTLKGNSTYSKLIKF 645
>gi|20093510|ref|NP_613357.1| superfamily I DNA/RNA helicase [Methanopyrus kandleri AV19]
gi|19886342|gb|AAM01287.1| Superfamily I DNA/RNA helicase [Methanopyrus kandleri AV19]
Length = 698
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 223/648 (34%), Positives = 348/648 (53%), Gaps = 107/648 (16%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEFQSTKG-DVLPAHKFGTHDVVVLK---PNKADLG 105
+KKG +L L+ A + G L+++ +K D + D+V++ P K+DL
Sbjct: 50 EKKGRAVLGLRGTRAGREVGGYYLVKYGRSKEIDT----QISVGDLVLVSRGDPLKSDL- 104
Query: 106 SPALGQGVVYRLKDSSITVAFDDIPEE-GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQ 164
G V SITVAFD P + + +R++ AN+VT++RM +AL ++
Sbjct: 105 -----TGTVVEKTKRSITVAFDSPPPKWAVGKGIRIDLYANDVTFQRMMEALERIRHA-- 157
Query: 165 NGPAAGLIPVLFGEQKPTVLKK-DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGT 223
G L + G + P+ + D+ F +++L++SQ++A+ AL + + F++HGPPGT
Sbjct: 158 EGRLRELRNTIIGLKNPSDAEPIDVDF--VDTDLNYSQREAVEHALGAPDFFLIHGPPGT 215
Query: 224 GKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLES 283
GKT T+ E+I+QEV+RG+K+LA A SN+A DNI+E LV V VR+GHPAR+ ++ E
Sbjct: 216 GKTRTITEVIVQEVRRGNKVLATAESNVAADNILEYLVERGVEAVRVGHPARVSKKLKER 275
Query: 284 ALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKE-------ER 336
L A V +N L + ++ +L++ +D+ +R + + R +S E E
Sbjct: 276 TLSAIV---ENHPLYRKAER-LRERAYRLIEKRDR-YQRPVPRWRRGMSDETILYLAREG 330
Query: 337 KRQQLAVTDVIKN--------------------------------ADVVLTTLTGAVSRK 364
K + VI++ A+VV+TT A
Sbjct: 331 KGARGVPPRVIQSMAKWIHINRKVQKLFEEAERLEERAVREVLEEAEVVVTTNASAGLEF 390
Query: 365 LDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLF 424
L++ FD+ ++DE +QA E + I + + R I+AGDH QLPPT+ S EA+ + L RTLF
Sbjct: 391 LEDIEFDVAVVDEGSQATEPSALIPISRAKRFIMAGDHKQLPPTILSEEAQPE-LSRTLF 449
Query: 425 ERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDI 484
ERL + + +++ ML VQYRMHE+IM + +++ YN K++AH S V+R + L D+
Sbjct: 450 ERLIEKH-PKLSRMLRVQYRMHENIMEFPNREFYNGKLEAH-SSVRRHT-------LEDL 500
Query: 485 AGCDMEEKKDEED------------------------------STMNEGEAEVAMAHAKR 514
D E + D S N EA + +++
Sbjct: 501 GVGDPEVGRPWADVLHPKEPLGFVDTSRLPERLRRERRRPGSKSRENPMEAAIVAFLSEQ 560
Query: 515 LIQSGVHASDIGIITPYAAQVVLLKILRSKDD-KLKNMEVSTVDGFQGREKEAIIISMVR 573
L++ G+ D+ +I+PY QV L I +S D+ L ++EV+TVDGFQGREKEA+I+S VR
Sbjct: 561 LVRQGLSQEDLAVISPYDDQVDL--ISKSLDELGLGDVEVNTVDGFQGREKEAVIVSFVR 618
Query: 574 SNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEY 621
SN K EVGFL D RR+NVA+TR RR+ + D+ T+SS +R IE+
Sbjct: 619 SNPKGEVGFLRDMRRLNVAITRPRRKLICIGDSGTLSSHPTYRRFIEH 666
>gi|373958634|ref|ZP_09618594.1| ATPase AAA [Mucilaginibacter paludis DSM 18603]
gi|373895234|gb|EHQ31131.1| ATPase AAA [Mucilaginibacter paludis DSM 18603]
Length = 636
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 183/532 (34%), Positives = 300/532 (56%), Gaps = 22/532 (4%)
Query: 122 ITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKP 181
IT+ D++P+ N L ++ L ++ +Y M++AL Q S + L+ VL G ++P
Sbjct: 106 ITLFTDELPDWCRNGKLGIDLLFDDNSYDEMQNALKQASVLSEKAGEGRLVKVLTGAEQP 165
Query: 182 TVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS 241
T + P + L+ SQ+ A+ K +S++++ ++HGPPGTGKTTT+V+ I + +G
Sbjct: 166 TFSAPLLL--PKLTGLNPSQQAAVEKIVSAQDLAIVHGPPGTGKTTTLVQAIKSLISQGE 223
Query: 242 K-ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
K +L A SN AVD + E+L + ++R+G+PAR+ +++ LD+++
Sbjct: 224 KQLLVVAPSNTAVDLLSEKLAGEGLNVLRIGNPARVSDRLMSLTLDSKMAEHGRMKDIKK 283
Query: 301 IRKEMKALNGKLLKTK------DKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVL 354
++K+ K K +++ R+ + E + K+ K +Q + D++ A V+
Sbjct: 284 LKKQAAEFKNMAHKYKRSFGKAERDQRKALFDEAHKIMKDVGKTEQYIIDDLVGRAQVIT 343
Query: 355 TTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA 414
TL G+ + F+ V+IDEA QALE ACWI +LK + ILAGDH QL PT++S +A
Sbjct: 344 ATLVGSNHYTIRGLQFNTVVIDEAGQALEPACWIPILKAQKVILAGDHFQLSPTIKSAKA 403
Query: 415 EKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS 474
GL TL E+ L+ + V +L QYRM+E IM +SS+ Y +K++AH S +R
Sbjct: 404 AHDGLSNTLLEKCITLHPEAVV-LLEEQYRMNEAIMTYSSQVFYQNKLQAHASVAQRLLF 462
Query: 475 T-EPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLI------QSGVHASDIGI 527
T + +D AGC +EK E S N EA H ++L+ + + I I
Sbjct: 463 TADAPFSYVDTAGCGFDEKP-EGTSMANAEEAGFLFKHLEKLVTELNEHYTTENFPTIAI 521
Query: 528 ITPYAAQVVLLKILRSKDDKLK----NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFL 583
++PY Q+ LLK + L+ + V+T+D FQG+E++ + ISM RSN+K E+GFL
Sbjct: 522 VSPYKEQIRLLKDQQQHWPGLQLYQDKISVNTIDSFQGQERDIVYISMTRSNTKGEIGFL 581
Query: 584 SDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
SD RRMNVA+TRAR++ ++ D+ T++ F +I+Y E+ Y S +++
Sbjct: 582 SDIRRMNVAMTRARKKLIIIGDSSTLAQAPFYADMIKYAEQINGYQSAWDFV 633
>gi|255533226|ref|YP_003093598.1| DEAD/DEAH box helicase [Pedobacter heparinus DSM 2366]
gi|255346210|gb|ACU05536.1| DEAD-like helicase [Pedobacter heparinus DSM 2366]
Length = 636
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 207/571 (36%), Positives = 314/571 (54%), Gaps = 35/571 (6%)
Query: 84 LPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKL 143
+PA F HD K +K + G A G RLK IT+ D++P+ N L ++ L
Sbjct: 77 MPAVLFSNHDP---KNDKVE-GLIAYQGGS--RLK---ITLCTDELPDWARNGKLGIDVL 127
Query: 144 ANEVTYRRMKDALIQLSKGVQNGPAAG--LIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQ 201
++ +Y M+ A+ + S VQN A LI +L G KP+ +D+ P + L+ Q
Sbjct: 128 FDDHSYDEMQAAVKRAS--VQNEQADNHHLIKILTGIDKPS-FAEDVVHYPV-AKLNKVQ 183
Query: 202 KDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSKILACAASNIAVDNIVERL 260
+ A+ ++++ + ++HGPPGTGKTTT+V+ + +K+ G +IL A SN AVD + E+L
Sbjct: 184 QLAVYHIVAAQQLAIVHGPPGTGKTTTLVQAVKTMIKQHGRQILVVAPSNTAVDLLSEKL 243
Query: 261 VPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK---EMKALNGKLLKT-- 315
+ ++R+G+P R+ ++ LD+++ + D++K E K + K +
Sbjct: 244 ADEGLNVLRIGNPVRVSEKLFSLTLDSKMSAHASIKEVKDLKKQAAEYKKMAHKYKRNFG 303
Query: 316 -KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVI 374
+K R+ + E L K +Q + D+I A VV TL GA + + FD V+
Sbjct: 304 RAEKEQRKALFDEAHKLMKAVAGAEQYIIEDLIGKAQVVTATLVGANHYTIKDRKFDTVV 363
Query: 375 IDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDE 434
IDEA QALE ACWI +LK + ILAGDH QLPPT++S +A K GL TL E+ L+ +
Sbjct: 364 IDEAGQALEPACWIPILKAQKVILAGDHCQLPPTIKSNDAAKAGLSTTLLEKCIALHPNA 423
Query: 435 VTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLL-LIDIAGCDMEEKK 493
V +L QYRMH IM +SSK Y K+KAH + T L ID AGC EE++
Sbjct: 424 VV-LLEEQYRMHTQIMAYSSKVFYEGKLKAHAAVAGHLLFPGDTALNFIDTAGCGFEEQR 482
Query: 494 DEEDSTMNEGEAEVAMAHAKRLI--QSGVHASD----IGIITPYAAQVVLLKILRSKDDK 547
E S N EA + H +L+ + V+ ++ IG+I+PY Q+ +LK L
Sbjct: 483 -EGTSIYNSEEAVFLLKHLTQLVLKLAEVYVAENFPSIGVISPYKQQIYILKDLLLNHPV 541
Query: 548 LK----NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLV 603
L+ + V+T+D FQG+E++ + I M RSN++ +GFLSD RRMNVA+TRAR++ ++
Sbjct: 542 LQLYIEKISVNTIDSFQGQERDIVYIGMTRSNNEGVIGFLSDIRRMNVAMTRARKKLVVI 601
Query: 604 CDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
D+ T+S F I Y E Y S E+
Sbjct: 602 GDSATLSRLPFYSDFIAYAESIDAYRSAWEF 632
>gi|325104103|ref|YP_004273757.1| ATPase AAA [Pedobacter saltans DSM 12145]
gi|324972951|gb|ADY51935.1| AAA ATPase [Pedobacter saltans DSM 12145]
Length = 629
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 186/528 (35%), Positives = 295/528 (55%), Gaps = 17/528 (3%)
Query: 122 ITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKP 181
I + D++P+ + ++ L + +Y MK AL + +N LI VL G +KP
Sbjct: 105 IALKVDELPDWMNKGKIGVQLLFDNNSYDEMKRALKKAEIIERNDTENRLIKVLTGVEKP 164
Query: 182 TVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQ-EVKRG 240
K+ + +S L+ SQ A++ L+++ + +LHGPPGTGKTTT+VE I ++ G
Sbjct: 165 FFKKEASGY--ISSRLNDSQNQAVNSILAAQELAILHGPPGTGKTTTLVEAISALYMQSG 222
Query: 241 SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
+IL A SN AVD + +L V ++R+G+P R+ ++ E LD ++ + +
Sbjct: 223 KQILVTAPSNTAVDLLTLKLAEKGVNVIRIGNPIRVSQKLEELTLDYKINQHQYNKEIKQ 282
Query: 301 IRKEMKALNGKLLKTK------DKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVL 354
++K+ K K ++ R+ + E L K+ + + D++ A V+
Sbjct: 283 LKKQAAEYRNMAHKYKRSFGKLEREQRKALFDEAHKLLKQVEQTESFISEDLLNKAQVIT 342
Query: 355 TTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA 414
TL G + + + +D+V+IDEAAQALE ACWI +L+ + I AGDHLQLPPTV+S EA
Sbjct: 343 ATLVGVNNYAIKDRDYDIVVIDEAAQALEPACWIPVLRSRKVIFAGDHLQLPPTVKSKEA 402
Query: 415 EKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS-GVKRTS 473
EK GL TL E+ + E S+LT QYRM++ I ++ S +LY SK+ A S ++
Sbjct: 403 EKLGLSSTLLEKNMGFHP-EAVSLLTTQYRMNKEINDYPSIELYESKLHADRSVATRKLD 461
Query: 474 STEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHAS-DIGIITPYA 532
+ + +D AGC +EK + S N EA + H L+Q+ A + +I+PY
Sbjct: 462 QKDIPVEFVDTAGCSFDEKIN-GTSVYNPEEANFTLKHLTGLLQNHNKAKYSVAVISPYK 520
Query: 533 AQVVLLKILRSKDDKLK----NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
QV LLK L + LK ++++T+D FQG+E++ + IS+ RSNS+ +GFLSD RR
Sbjct: 521 QQVELLKELIEDWEDLKPFLAQIDINTIDSFQGQERDIVYISLTRSNSENAIGFLSDIRR 580
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLN 636
MNVA+TRAR + ++ D+ T+S + F I Y E+ Y S E+++
Sbjct: 581 MNVAITRARMKLVVIGDSGTLSKNAFYSDFISYTEKINGYKSAWEFMH 628
>gi|448084543|ref|XP_004195631.1| Piso0_005032 [Millerozyma farinosa CBS 7064]
gi|359377053|emb|CCE85436.1| Piso0_005032 [Millerozyma farinosa CBS 7064]
Length = 738
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 240/727 (33%), Positives = 360/727 (49%), Gaps = 116/727 (15%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLE 75
++FVS L+D+E++A+ + + QK G NL +A+ GL G T+LE
Sbjct: 8 EQFVSGFKQLVDIEQKADALLTNEYLNKYSPKKLQKYGLAATNLVVKNARNGLGGNTVLE 67
Query: 76 F---QSTK-------------GDVLPAHKFGTHDVVVLKPNKADLGSPALGQ---GVVYR 116
+ K GD++ K + +K + V+ +
Sbjct: 68 LCLDSAVKAEDQELDSGDLKVGDIVRVEKMKSSQEQSSSQSKDSKQEDEMNSYLDAVITK 127
Query: 117 LKDSSITVAF--DDIPEEGLN--------SPLRLEKLANEVTYRRMKDALIQLSKGVQNG 166
+ S I VA ++ E +N + L KL+N VTY+RM L +L +
Sbjct: 128 ITSSVINVAVSENNSGESIINLYNNTQNEQKVWLVKLSNSVTYKRMISTLNKLGEVDIAS 187
Query: 167 PAAGLIPVLFGEQKPTVLKKDIAFKP------FNSNLDHSQKDAISKALSSKNVFMLHGP 220
+I L G + T+ K D+ + FN +L+ SQK+AI+ +L ++HGP
Sbjct: 188 SPNQVIQYLLGFR--TLDKTDVGIQKLKDKDFFNQSLNESQKEAINFSLFESPFSIIHGP 245
Query: 221 PGTGKTTTVVEIILQ-EVKRGSKILACAASNIAVDNIVERLV------PHR--------- 264
PGTGKT T++EII Q +K+ ++L C SN++VD I+ERL P+
Sbjct: 246 PGTGKTYTLIEIIKQLSLKQNERVLVCGPSNVSVDTILERLALEFDPKPNTKEKRSKGQK 305
Query: 265 -------VRLVRLGHPARLLPQVLESALD----AQVLRGDNS-SLASDIRKEMKALNGKL 312
+L+R+GHPARLL L+ +L+ + V G++S ++ DI ++ K+
Sbjct: 306 KSGTRDPSQLIRIGHPARLLDSCLKHSLEVLSKSDVGSGNDSRAILKDIENDINDTLRKI 365
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKL------- 365
K ++ RR + +L+ KE +KR+ V++++ A V+L TL G+ L
Sbjct: 366 KKCRNYGERRVLWNDLKGYRKELKKRETKLVSELVVGAKVILATLHGSGGYDLTSVYKNP 425
Query: 366 ------DNTSFDLVIIDEAAQALEIACWIAL---LKGSRCILAGDHLQLPPTVQSVE--- 413
D FD +IIDE +Q+LE CWI L L R I+AGD+LQLPPTV+S +
Sbjct: 426 EFASVKDGNLFDTIIIDEVSQSLEPQCWIPLISHLGFKRLIIAGDNLQLPPTVKSSKLDA 485
Query: 414 ----------AEKKGLGRTLFERLA-DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKI 462
A + L TLF+R+ + GD +L QYRM++ IM + S++LY K+
Sbjct: 486 PAAQGVAVPAAARHSLEVTLFDRIVRECNGDAYKKLLDTQYRMNDAIMAFPSRELYEGKL 545
Query: 463 KAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEED--------STMNEGE 504
KA S V+ T T P L D G D E+ D+ + S NE E
Sbjct: 546 KADSSVKNILLRDMPNVQPTDETSPPCLWYDTQGGDYPEQMDDSENPLTDSMGSKYNEME 605
Query: 505 AEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREK 564
H LI +GV DIG+I+PYAAQV L+ + L +E +T+D FQGREK
Sbjct: 606 LLAVKKHIDLLIAAGVAPRDIGVISPYAAQVARLRKALAA-ADLDAVEAATIDAFQGREK 664
Query: 565 EAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS-SD-GFLKRLIEYF 622
EAIIIS+VRSN + VGFLS++RR+NVA+TR +R C+V D + +S SD FL+ +
Sbjct: 665 EAIIISLVRSNDDRAVGFLSEKRRLNVAMTRPKRHLCVVGDMDLMSRSDVPFLRHWAAHV 724
Query: 623 EEHAEYL 629
E E L
Sbjct: 725 ESSYEIL 731
>gi|261350062|ref|ZP_05975479.1| putative DNA helicase [Methanobrevibacter smithii DSM 2374]
gi|288860848|gb|EFC93146.1| putative DNA helicase [Methanobrevibacter smithii DSM 2374]
Length = 658
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 215/677 (31%), Positives = 365/677 (53%), Gaps = 102/677 (15%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKK--GSTILNLKCVDAQTGLMGKT 72
+++++ + LI+ E++AEI + + +NL +++ G I +K L G
Sbjct: 1 MKKYIKQLIKLINYERDAEIE--LMTKEIKNLSPKKRESLGRAINKVKGKYLGKQL-GSQ 57
Query: 73 LLEF-QSTKGDVLPAHKFGTHDVVVLK---PNKADLGSPALGQGVVYRLKDSSITVAFD- 127
+++F +S K + + D+V++ P ++DL + +G + I VAF+
Sbjct: 58 IVQFGRSEKIET----EISVGDMVLISTGYPLRSDLTGTVVEKGARF------IKVAFEK 107
Query: 128 DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKD 187
IP+ L +R++ AN+VT+RRM+D L+ L+ +N L ++ P KK+
Sbjct: 108 SIPKWTLKKKVRIDLYANDVTFRRMEDNLMHLNTKGKNALEYSL-----KKRDPKENKKE 162
Query: 188 IAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACA 247
+ +L+ SQK+A+ A++++N F++HGP GTGKT T+VE+I QEV++ +K+L A
Sbjct: 163 KYIDFIDKSLNESQKNAVRNAVNTENFFLIHGPFGTGKTRTLVELIQQEVRQSNKVLVTA 222
Query: 248 ASNIAVDNIVERLVPHR-VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
SN AVDNI++RL ++ +++ RLGHP R+ + + +L + +N L I K K
Sbjct: 223 ESNSAVDNILDRLSQNKKLKITRLGHPQRVSKENIAYSL---AYKSENHQLTCKINKNYK 279
Query: 307 ALNGKLLKTKDKNTRREIQ--------------------------------------KEL 328
+ ++ +T+D+ T+ Q +++
Sbjct: 280 RIE-QISETRDRFTKPTPQYRRGFSDSDILYNASKGKGGRGISSSKMESMANWLLENEKI 338
Query: 329 RTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWI 388
+ + +K + V D+I ++D++L+T + A ++ T F++VI+DEA+QA + I
Sbjct: 339 SEIHYKIKKLENKIVKDIINSSDIILSTNSTAAIEEIVRTKFNVVIVDEASQATIPSILI 398
Query: 389 ALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEH 448
L K R ILAGDH QLPPT+ S +A L +TLFE L Y ++ +S+L VQYRM+
Sbjct: 399 PLSKARRFILAGDHKQLPPTIISKKAH--FLEKTLFEELIKKYPNK-SSLLNVQYRMNSF 455
Query: 449 IMNWSSKQLYNSKIKAHPSG----------------------VKRTSSTEPTLLLIDIAG 486
+M + + + YN +K+ S K+ + LL ID +
Sbjct: 456 LMKFPNLEFYNGNLKSDSSVDNINLDEIIDLEELSRLKESDVEKQLHNNLKPLLFIDTSN 515
Query: 487 CDMEEKKDEEDS--TMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSK 544
E+K +DS +N+ EA++A + AK + +G++ DIGII+PYA QV L++
Sbjct: 516 LKNNEEKHLKDSKSIINQSEADIATSIAKFYLGTGINPKDIGIISPYADQVNLIQ----- 570
Query: 545 DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
DK+ +EV +VDGFQGREKE IIIS VRSN K++GFL D RR+NVA+TRA+R+ ++
Sbjct: 571 -DKIP-IEVKSVDGFQGREKEIIIISTVRSNKNKDIGFLKDLRRLNVAITRAKRKLIVIG 628
Query: 605 DTETVSSDGFLKRLIEY 621
+ T+ + +LI++
Sbjct: 629 NKNTLKGNSTYSKLIKF 645
>gi|15668275|ref|NP_247068.1| DNA-binding protein [Methanocaldococcus jannaschii DSM 2661]
gi|2498043|sp|Q57568.1|Y104_METJA RecName: Full=Uncharacterized ATP-dependent helicase MJ0104
gi|1590880|gb|AAB98084.1| DNA-binding protein, probably DNA helicase [Methanocaldococcus
jannaschii DSM 2661]
Length = 663
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 230/677 (33%), Positives = 356/677 (52%), Gaps = 106/677 (15%)
Query: 18 FVSVMAPLIDLEKEAEISAS----ITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
+V LI++E+ E+ I G R + G ILNLK L G T+
Sbjct: 17 YVKKFMDLIEIERRCEMDFHKNEIIKLGKKR-----ENVGRAILNLKGKFLGESL-GCTI 70
Query: 74 LEF---QSTKGDVLPAHKFGTHDVVVL---KPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ F + K ++ P DVV++ P ++DL + + G + I VAFD
Sbjct: 71 VRFGRKKPFKTEISPG------DVVLVSKENPLQSDLYANVIYVG------KNFIDVAFD 118
Query: 128 -DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
D+P+ +R++ N++T++RMK+AL + ++ + A +I + +KP L++
Sbjct: 119 VDVPKWVYKERVRVDLYVNDITFKRMKEALREFAR--KRDKLAYIILGIEHPEKP--LRE 174
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILA 245
DI + ++ NL+ SQK A+ KA+ S++++++HGPPGTGKT T+ E+I+QEVK K+LA
Sbjct: 175 DIKLEFYDKNLNESQKLAVKKAVLSRDLYLIHGPPGTGKTRTITEVIVQEVKFNKHKVLA 234
Query: 246 CAASNIAVDNIVERLVPHR--VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR- 302
A SNIA DNI+E L+ +++VR+GHP R+ +++ +L + + +R
Sbjct: 235 TADSNIAADNILEYLIKKYPDLKVVRVGHPTRISKDLIQHSLPYLIENHEKYQEILALRE 294
Query: 303 --KEMKALNGKLLK-----------------TKDKNTRREIQKELRTLSKEERKRQQLAV 343
KE+K K LK K K + R I KE + +S E + +
Sbjct: 295 KIKEIKEQRDKFLKPSPRWRRGMSDEQILKVAKRKKSYRGIPKE-KIVSMAEWIIRNKKI 353
Query: 344 TDVIKN---------------ADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWI 388
+I N ADV++ T + A S L FD+++IDE +QA+E +C I
Sbjct: 354 KRIINNLDEITEKIMNEILAEADVIVATNSMAGSEILKGWEFDVIVIDEGSQAMEPSCLI 413
Query: 389 ALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEH 448
++KG + I+AGDH QLPPTV S E + L +TLFERL Y E +S+L +QYRM+E
Sbjct: 414 PIVKGRKLIMAGDHKQLPPTVLS---ENEELKKTLFERLIKKYP-EFSSILEIQYRMNEK 469
Query: 449 IMNWSSKQLYNSKIKAHPS----------------GVKRTSSTEPTLLLIDIAGCDMEEK 492
IM + +K YN+K+KA S V R E + I++ G +E K
Sbjct: 470 IMEFPNKMFYNNKLKADESVKNITLLDLVKEEEIDEVDRDIINEIPVQFINVEG--IERK 527
Query: 493 KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNME 552
E S N EAE + K+L++ + + +ITPY AQV L+ L + + ++E
Sbjct: 528 DKESPSYYNIEEAEKVLEIVKKLVKYKIPTN---VITPYDAQVRYLRRLFEEHN--IDIE 582
Query: 553 VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSD 612
V+TVDGFQGRE EAI+IS VR+ K GFL D RR+NVA+TRA+R+ L+ + + D
Sbjct: 583 VNTVDGFQGRENEAIVISFVRT---KNFGFLKDLRRLNVAITRAKRKLILIGNENLLKQD 639
Query: 613 GFLKRLIEYF----EEH 625
+I++ EEH
Sbjct: 640 KVYNEMIKWAKSVEEEH 656
>gi|359405877|ref|ZP_09198604.1| putative DNA helicase [Prevotella stercorea DSM 18206]
gi|357557227|gb|EHJ38779.1| putative DNA helicase [Prevotella stercorea DSM 18206]
Length = 622
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 189/509 (37%), Positives = 291/509 (57%), Gaps = 31/509 (6%)
Query: 135 NSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN 194
+ P+ L+ +E +YR M +AL ++ + G A L + + L P+
Sbjct: 128 SEPIGLQLFFDETSYRLMFEALDRVMNA-KTGRLAALRDIFYTNAPAQKLTFGAMSLPW- 185
Query: 195 SNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVD 254
L+ SQ+ A+++ L +K+V ++HGPPGTGKTTT+VE I + ++R S++L CA SN+AVD
Sbjct: 186 --LNASQQQAVNEVLRAKDVAVVHGPPGTGKTTTLVEAIYETLRRESQVLVCAQSNMAVD 243
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
I E+LV V ++R+G+P R+ ++L + + + IRK ++ L G+ +
Sbjct: 244 WIAEKLVDRGVNVLRIGNPTRVNDKMLSFTYERRFEAHPDYPQLWSIRKAIRELRGERRR 303
Query: 315 TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVI 374
+ + + + K R E R R L A V+ TLTGA +R L+ F +
Sbjct: 304 SDAWHQKMDRLKS-RATEIELRIRASL-----FGEARVIACTLTGAANRVLEGEKFSTLF 357
Query: 375 IDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDE 434
IDEAAQALE ACWIA+ + R I AGDH QLPPTV+S+ A K GLG TL ER+ D
Sbjct: 358 IDEAAQALEAACWIAIRRAGRVIFAGDHCQLPPTVKSIMALKGGLGITLMERIVKAKPDV 417
Query: 435 VTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS--STEPTLLLIDIAGCD-MEE 491
VT +L VQYRM+E IM +SS Y +++ P G++R S + ++ +D + + EE
Sbjct: 418 VT-LLKVQYRMNEQIMRFSSDWFYGGEVQTAP-GIERRSILDYDRPMMWVDTSEAEGKEE 475
Query: 492 KKDEEDSTMNEGEAEVAMAH---------AKRLIQSGVHASDIGIITPYAAQVVLL-KIL 541
E +N EAE+ + +R++ + D+GII+PY AQV LL K++
Sbjct: 476 FVGENFGRINRTEAELTLQTLQQYFEKIGKQRILDEHI---DVGIISPYRAQVQLLHKMI 532
Query: 542 RSKD---DKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARR 598
R + + + V+TVDGFQG+E++ I+IS+VR+N KE+GFL D RRMNVA+TRAR
Sbjct: 533 RQSEFFRPYRRAISVNTVDGFQGQERDIIVISLVRNNDGKEIGFLRDLRRMNVAITRARM 592
Query: 599 QCCLVCDTETVSSDGFLKRLIEYFEEHAE 627
+ ++ T+++ F K+L E+ A+
Sbjct: 593 KLIILGSAATMTAHPFYKKLYEWISGQAD 621
>gi|148643141|ref|YP_001273654.1| DNA2/NAM7 helicase family transcriptional regulator
[Methanobrevibacter smithii ATCC 35061]
gi|148552158|gb|ABQ87286.1| transcriptional regulator (enhancer-binding protein), DNA2/NAM7
helicase family [Methanobrevibacter smithii ATCC 35061]
Length = 658
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 214/677 (31%), Positives = 361/677 (53%), Gaps = 102/677 (15%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKK--GSTILNLKCVDAQTGLMGKT 72
+++++ + LI+ E++AEI + + +NL +++ G I +K L G
Sbjct: 1 MKKYIKQLIKLINYERDAEIE--LMTNEIKNLSPKKRESLGRAINKVKGKYLGKQL-GSQ 57
Query: 73 LLEF-QSTKGDVLPAHKFGTHDVVVLK---PNKADLGSPALGQGVVYRLKDSSITVAFD- 127
+++F +S K + + D+V++ P ++DL + +G + I VAF+
Sbjct: 58 IVQFGRSEKIET----EISVGDMVLISTGYPLRSDLTGTVVEKGARF------IKVAFEK 107
Query: 128 DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKD 187
IP+ L +R++ AN+VT+RRM+D L+ L+ +N L ++ P KK+
Sbjct: 108 SIPKWALKKKVRIDLYANDVTFRRMEDNLLHLNTKGKNALEYSL-----KKRDPKENKKE 162
Query: 188 IAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACA 247
+ +L+ SQK+A+ A++++N F++HGP GTGKT T+VE+I QEV++ +K+L A
Sbjct: 163 KYIDFIDKSLNESQKNAVRNAVNTENFFLIHGPFGTGKTRTLVELIQQEVRQNNKVLVTA 222
Query: 248 ASNIAVDNIVERLVPHR-VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
SN AVDNI++RL ++ +++ RLGHP R+ + + +L + +N L I K K
Sbjct: 223 ESNSAVDNILDRLSQNKKLKITRLGHPQRVSKENITYSL---AYKAENHQLTGKINKNYK 279
Query: 307 ALNGKLLKTKDKNTRREIQ--------------------------------------KEL 328
+ ++ +T+D+ T+ Q +++
Sbjct: 280 RIE-QISETRDRFTKPTPQYRRGFSDSDILYNASKGKGGRGINSSKMESMANWLLENEKI 338
Query: 329 RTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWI 388
+ + +K + V D+I ++D++L+T + A ++ T F++VI+DEA+QA + I
Sbjct: 339 SEIHDKIKKLENKIVKDIINSSDIILSTNSTAAIEEIARTKFNVVIVDEASQATIPSILI 398
Query: 389 ALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEH 448
L K R ILAGDH QLPPT+ S +A L +TLFE L Y ++ S+L VQYRM+
Sbjct: 399 PLSKARRFILAGDHKQLPPTIISKKAH--FLEKTLFEELIKKYPNKA-SLLNVQYRMNSF 455
Query: 449 IMNWSSKQLYNSKIKAHPSG----------------------VKRTSSTEPTLLLIDIAG 486
+M + + + YN +K+ S K+ + LL ID +
Sbjct: 456 LMKFPNSEFYNGNLKSDSSVDDINLDEIIDSEELSRLKESDVEKQLHNNLKPLLFIDTSN 515
Query: 487 CDMEEKKDEEDS--TMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSK 544
E+K +DS +N+ EA +A + AK + +G++ DIGII+PYA QV L++
Sbjct: 516 LKNNEEKHLKDSKSIINQSEAAIATSIAKFYLGTGINPKDIGIISPYADQVNLIQ----- 570
Query: 545 DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
DK+ +EV +VDGFQGREKE IIIS VRSN +GFL D RR+NVA+TRA+R+ ++
Sbjct: 571 -DKIP-IEVKSVDGFQGREKEIIIISTVRSNKNGNIGFLKDLRRLNVAITRAKRKLIVIG 628
Query: 605 DTETVSSDGFLKRLIEY 621
+ T+ + +LI++
Sbjct: 629 NKNTLKGNSTYSKLIKF 645
>gi|325280121|ref|YP_004252663.1| helicase [Odoribacter splanchnicus DSM 20712]
gi|324311930|gb|ADY32483.1| putative helicase [Odoribacter splanchnicus DSM 20712]
Length = 627
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 185/525 (35%), Positives = 299/525 (56%), Gaps = 21/525 (4%)
Query: 112 GVVYRLKDSSITVAFDD---IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPA 168
V+ ++D+ + V +PE + L ++ ++ +Y+ M AL ++++ N
Sbjct: 104 AVISYVQDNKMVVVLPGPQVLPELVVTGELGVQLYFDDTSYKTMFAALREVAEAKGNR-T 162
Query: 169 AGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTT 228
A L VL G K L+++ F L+ SQ+ A+++ L +K V ++HGPPGTGKTTT
Sbjct: 163 ARLREVLLG--KAPALRRETGPVRF-PWLNASQEKAVNQVLCAKEVAVVHGPPGTGKTTT 219
Query: 229 VVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQ 288
+VE + + + R ++++ A SN AVD I E+LV + ++R+G+P R+ ++L + +
Sbjct: 220 LVEAVYETLHRENQVMVSAQSNTAVDWIAEKLVDRGIPVLRIGNPTRVNDKMLAFTYERR 279
Query: 289 VLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIK 348
+ IRK ++ + G+L K+ + R + +L L + T++
Sbjct: 280 FEAHSDYPELWQIRKTIREMTGRLRKS-GREDRERLHNQLTKLRVRATGLEIRIDTELFT 338
Query: 349 NADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPT 408
A V+ TL GA SR L+ F + IDEAAQA+E ACWIA+ + R ILAGDH QLPPT
Sbjct: 339 EARVIACTLVGAASRVLERKRFSSLFIDEAAQAIEAACWIAISRADRVILAGDHCQLPPT 398
Query: 409 VQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSG 468
++ +EA + GLGRTL E++ L+ E S+L +QYRMHE IM + S+ Y+ +++A P
Sbjct: 399 IKCIEAARGGLGRTLLEKVV-LHKPETVSLLKIQYRMHEDIMRFPSRWFYHDELEAAPEV 457
Query: 469 VKR-TSSTEPTLLLIDIAGCDMEEKKDEEDS-TMNEGEAEVAMAHAKRLIQS-GVH---- 521
R + + ID + D++EK E + +N GEAE+ + K ++ G+
Sbjct: 458 KYRGILDFDTPVSWIDTSELDLQEKAVAEGTGRLNTGEAELLVRELKNYMERIGIRRILE 517
Query: 522 -ASDIGIITPYAAQVVLLKILRSKDDKLKN----MEVSTVDGFQGREKEAIIISMVRSNS 576
D G+I+PY AQV L+ L K+ + + V TVDGFQG+E++ I+IS+VR+N
Sbjct: 518 EHIDFGVISPYRAQVHYLRHLLKKEPFFRPCRRLITVHTVDGFQGQERDVIMISLVRANE 577
Query: 577 KKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEY 621
K ++GFL D RRMNVA+TRAR + ++ + T++ F + L EY
Sbjct: 578 KGQIGFLRDLRRMNVAITRARMKLLILGEAVTLTRHPFYRELYEY 622
>gi|294675290|ref|YP_003575906.1| helicase [Prevotella ruminicola 23]
gi|294473767|gb|ADE83156.1| putative helicase [Prevotella ruminicola 23]
Length = 539
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 183/513 (35%), Positives = 290/513 (56%), Gaps = 45/513 (8%)
Query: 138 LRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN-SN 196
L ++ +E +Y+ M DAL ++ G L + + QK F P + +
Sbjct: 43 LGIQLFFDETSYKMMFDALDRVMSA--KGRLGYLRDLFYNRQKAETFN----FSPLHFTY 96
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNI 256
L+ +Q+DA++K L +K+V ++HGPPGTGKTTT+VE I + + R S++L CA SN+AVD I
Sbjct: 97 LNATQEDAVNKVLRAKDVAIVHGPPGTGKTTTLVEAIYETLMRESQVLVCAQSNMAVDWI 156
Query: 257 VERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK 316
E LV V ++R+G+P R+ ++L + + + + +RK ++ +
Sbjct: 157 SEILVDRGVNVLRIGNPTRVNDKMLSFTYERRFEAHPDYEMLWALRKAIREVRA------ 210
Query: 317 DKNTRREIQKELRTLSKEERKRQQLAV---TDVIKNADVVLTTLTGAVSRKLDNTSFDLV 373
N +R QK + + + + + +L + D+ A V+ TL G+ ++ LD F +
Sbjct: 211 --NRKRGDQKFHQKVERLKERATELELRIKNDLFSEARVIACTLVGSANKVLDGQKFGTL 268
Query: 374 IIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGD 433
IDEAAQALE ACWI + + SR ILAGDH QLPPTV+ EA K GLG+TL ER+ +
Sbjct: 269 FIDEAAQALEAACWIPMRRVSRVILAGDHCQLPPTVKCYEALKAGLGKTLMERIVE-NKP 327
Query: 434 EVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS-STEPTLLLIDIAGCDM--- 489
EV ++L +QYRM+E IM +SS YN+++++ P R+ + + ID + D
Sbjct: 328 EVVTLLKMQYRMNEEIMRFSSDWFYNNQVESAPDVKYRSILDLDVPMTWIDTSQFDFPEE 387
Query: 490 ------EEKKDEEDSTMNEGEAEVAMAHAK---------RLIQSGVHASDIGIITPYAAQ 534
EE E +N+ EAE+ M + R+I+ + D+G+I+PY AQ
Sbjct: 388 SGITFKEEFVGESFGRINKAEAELTMLALQQYFEKIGKERIIKERI---DVGVISPYRAQ 444
Query: 535 VVLLKILRSKDDKLKNME----VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
V L+ K + K + ++TVDGFQG+E++ I+IS+VR+N + ++GFL D RRMN
Sbjct: 445 VQYLRQQLKKREFFKPFKSLISINTVDGFQGQERDIIMISLVRANDEGQIGFLRDLRRMN 504
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFE 623
VA+TRAR + ++ D T++ F K+L +Y E
Sbjct: 505 VAITRARMKLIILGDASTLTRHPFYKKLYDYIE 537
>gi|289192489|ref|YP_003458430.1| DNA helicase [Methanocaldococcus sp. FS406-22]
gi|288938939|gb|ADC69694.1| DNA helicase [Methanocaldococcus sp. FS406-22]
Length = 647
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 227/673 (33%), Positives = 358/673 (53%), Gaps = 104/673 (15%)
Query: 18 FVSVMAPLIDLEKEAEISAS----ITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
+V LI++E+ E+ I G R + G ILNLK L G T+
Sbjct: 7 YVKKFMDLIEIERRCEMDFHKNEIIKLGKKR-----ENVGRAILNLKGKFLGESL-GCTI 60
Query: 74 LEF---QSTKGDVLPAHKFGTHDVVVL---KPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ F + K ++ P DVV++ P ++DL + + G + I VAFD
Sbjct: 61 VRFGRKKPFKTEISPG------DVVLISKENPLQSDLYANVIYVG------KNFIDVAFD 108
Query: 128 -DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
D+P+ +R++ N++T++RMK+AL + ++ + A +I + +KP L++
Sbjct: 109 VDVPKWVYKERVRVDLYVNDITFKRMKEALREFAR--KRDKLAYIILGIEHPEKP--LRE 164
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILA 245
+I + ++ NL+ SQK A+ KA+ SK+++++HGPPGTGKT T+ E+I+QEV+ K+LA
Sbjct: 165 NIKLEFYDKNLNESQKIAVKKAVLSKDLYLIHGPPGTGKTRTITEVIVQEVRFNKHKVLA 224
Query: 246 CAASNIAVDNIVERLVPHR--VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR- 302
A SNIA DNI+E L+ +++VR+GHP R+ +++ +L + + +R
Sbjct: 225 TADSNIAADNILEYLIKKYPDLKVVRVGHPTRISKDLIQHSLPYLIENHEKYQEILSLRE 284
Query: 303 --KEMKALNGKLLK-----------------TKDKNTRREIQKELRTLSKEE---RKRQ- 339
KE+K K LK K K + R I KE + +S E R R+
Sbjct: 285 KIKEIKEQRDKFLKPSPRWRRGMSDEQILKVAKRKKSYRGIPKE-KIISMAEWIIRNRKI 343
Query: 340 -----------QLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWI 388
+ + +++ ADV+++T + A S L FD+V+IDE +QA+E +C I
Sbjct: 344 KRIINNLDEITEKIMNEILSEADVIVSTNSMAGSEILKGWEFDVVVIDEGSQAMEPSCLI 403
Query: 389 ALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEH 448
++KG + I+AGDH QLPPTV S E + L +TLFERL Y E +S+L +QYRM+E
Sbjct: 404 PIVKGKKLIMAGDHKQLPPTVLS---ENEELKKTLFERLIKKYP-EFSSILEIQYRMNEK 459
Query: 449 IMNWSSKQLYNSKIKAHPS----------------GVKRTSSTEPTLLLIDIAGCDMEEK 492
IM + +K Y++K+KA S R E + I + G E+
Sbjct: 460 IMEFPNKMFYDNKLKADESVKNITLLDLVKEEEIDEADRDIINEIPVQFIHVEGV---ER 516
Query: 493 KDEED-STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNM 551
KD+E S N EAE + K+L++ + + +ITPY AQV L+ R ++ ++
Sbjct: 517 KDKESPSYYNIEEAEKVLEVVKKLVKYKIPTN---VITPYDAQVRYLR--RMFEEHNIDI 571
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
EV+TVDGFQGRE EAI+IS VR+ K GFL D RR+NVA+TRA+R+ L+ + +
Sbjct: 572 EVNTVDGFQGRENEAIVISFVRT---KNFGFLRDLRRLNVAITRAKRKLILIGNEHLLKQ 628
Query: 612 DGFLKRLIEYFEE 624
D +I++ E
Sbjct: 629 DKVYNEMIKWARE 641
>gi|261402463|ref|YP_003246687.1| DNA helicase [Methanocaldococcus vulcanius M7]
gi|261369456|gb|ACX72205.1| DNA helicase [Methanocaldococcus vulcanius M7]
Length = 651
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 222/672 (33%), Positives = 354/672 (52%), Gaps = 108/672 (16%)
Query: 18 FVSVMAPLIDLEKEAEISAS----ITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
+V LI++E+ E+ I G R + G ILNLK L G TL
Sbjct: 7 YVKKFKDLIEIERRCEMDFHKNEIIRLGKKR-----ENVGRAILNLKGKFLGESL-GCTL 60
Query: 74 LEF---QSTKGDVLPAHKFGTHDVVVLK---PNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ F + K ++ P DVV++ P K+DL + + G + I VAFD
Sbjct: 61 VRFGRKKPFKTEISPG------DVVLISREDPLKSDLYANVISVG------KNFIDVAFD 108
Query: 128 -DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKP-TVLK 185
D+P+ +R++ N++T++RMK+AL + +K LI ++ G ++P L+
Sbjct: 109 EDVPKWVYKDRVRIDLYVNDITFKRMKEALREFAKR-----KNKLIYIILGLERPEKPLR 163
Query: 186 KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KIL 244
+DI K ++ L+ SQK A+ +A+ SK+++++HGPPGTGKT T+ E+I+QEV K+L
Sbjct: 164 EDIKIKFYDDKLNDSQKLAVKRAVLSKDLYLIHGPPGTGKTRTLTEVIVQEVNFNKHKVL 223
Query: 245 ACAASNIAVDNIVERLVPHR--VRLVRLGHPARLLPQVLESALDAQVLRGDNS----SLA 298
A A SN A DNI+E LV +++VR+GHP R+ ++E +L + + SL
Sbjct: 224 ATADSNTAADNILEYLVKKYPDLKVVRVGHPTRISKDLIEHSLPYLIENHEKYQEVLSLK 283
Query: 299 SDIRKEMKALNGKLLKTKDKNTR-----------------------------------RE 323
I K++K K LK + R ++
Sbjct: 284 ERI-KQIKEERDKFLKPSPRWRRGMSDEQILKISKKKKSYRGIPKEKIISMAEWITKNKK 342
Query: 324 IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALE 383
IQK +R L K + +++ ADVV++T + A S L + FD+V+IDE +QA+E
Sbjct: 343 IQKIIRNLDDLTEK----IINEILSEADVVVSTNSMAGSDVLKDWEFDVVVIDEGSQAME 398
Query: 384 IACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQY 443
+C I ++KG++ I+AGDH QLPPTV S E K L +TLFERL Y D +S+L +QY
Sbjct: 399 PSCLIPIVKGNKLIMAGDHKQLPPTVLS---ENKELKKTLFERLIKKYPD-FSSILEIQY 454
Query: 444 RMHEHIMNWSSKQLYNSKIKAHPS-------------GVKRTSSTEPTLLLIDIAGCDME 490
RM+E IM + ++ Y++K+KA S ++ T + + + + +
Sbjct: 455 RMNEKIMEFPNRMFYDNKLKADESVKNITLLDLVKEEEIEETDKSIVNKIPVQFINVEGK 514
Query: 491 EKKDEED-STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK 549
E++D+E S N EAE K+L++ + I +ITPY AQV L+ + +++
Sbjct: 515 ERRDKESYSYYNIEEAEQVFDIVKKLLKYRIP---ISVITPYDAQVRYLRSMFEENN--I 569
Query: 550 NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
++EV+TVDGFQGRE E I+IS VR+ ++ GFL D RR+NVA+TR +R+ L+ + +
Sbjct: 570 DVEVNTVDGFQGRENETIVISFVRT---EKFGFLKDLRRLNVAITRPKRKLVLIGNENLL 626
Query: 610 SSDGFLKRLIEY 621
D +I++
Sbjct: 627 KQDKIYNEMIKW 638
>gi|149193893|ref|ZP_01870991.1| DNA helicase, UvrD/REP family protein [Caminibacter mediatlanticus
TB-2]
gi|149135846|gb|EDM24324.1| DNA helicase, UvrD/REP family protein [Caminibacter mediatlanticus
TB-2]
Length = 641
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 207/675 (30%), Positives = 353/675 (52%), Gaps = 101/675 (14%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASIT-----SGASRNLDTAQKKGSTILNLKCVDAQTGL 68
S++E+ S LI+ E+ AE + SG R QK+G IL L+
Sbjct: 7 SIEEYRSYFKELIEKERVAEKEFHLNEIKRLSGVER-----QKRGRAILGLRM-----RY 56
Query: 69 MGKTLLEFQSTKGDV--LPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF 126
+G+ L+F+ + + +P H+ D+V++ + G+ + + ++++++
Sbjct: 57 VGE-FLDFKIYRFNRNNMPEHQIKVGDIVLI----------SRGEPLKFN-QEATVSAVG 104
Query: 127 DDIPEEGLNSPL------RLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQK 180
+ E P+ RL+ N++T++RM AL L + + ++ G++
Sbjct: 105 KNFIEVYSKEPIFRSKLYRLDLFVNDITFKRMLKALDNLENSEFD------VDIILGKKN 158
Query: 181 PTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG 240
P + K ++ + L+ SQ A+S +++S+ F++HGPPGTGKTTT+ E+I + + G
Sbjct: 159 PKLEKVEVK----SDKLNDSQNKALSYSINSE-TFLIHGPPGTGKTTTLAEVIKKHI--G 211
Query: 241 SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
KIL CA SN+AVDN++E+L + V VR+GHPA++ +++ +LD ++ R
Sbjct: 212 KKILVCADSNVAVDNVLEKLSEYNV--VRIGHPAKIESNLMKYSLDVKIRRDKRYKEVEK 269
Query: 301 IRK---EMKALNGKLLKTKDKNTRR--------------------------------EIQ 325
+ K ++K L K K + RR +IQ
Sbjct: 270 LIKKIDDLKYLQEKRTKKPTPSRRRGMSDEEILDLAKQGKGKRGVKVEWIKEMAEWLKIQ 329
Query: 326 KELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIA 385
+++ L E+ K + + +++ +AD+V T +GA S L+ FD+V +DEAAQ++E +
Sbjct: 330 RKISKLYDEKNKITEEIMKEILNSADIVFATNSGAGSEFLEERKFDVVFLDEAAQSMEPS 389
Query: 386 CWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRM 445
I L+K + I AGD QLPPT+ S + L ++FER +Y + L VQYRM
Sbjct: 390 TLIPLIKAKQSIFAGDDKQLPPTILSNDER---LKVSMFERFHKIYPI-ASHTLEVQYRM 445
Query: 446 HEHIMNWSSKQLYNSKIKAHPS---------GVKRTSST--EPTLLLIDIAGCDMEEKKD 494
+E I N+ S + Y K+K + GV S ++ D G +EE K
Sbjct: 446 NEKINNFPSCEFYECKVKTYEKIKNITLKDLGVNEDESFGGYTPIVFFDTRGKFLEETKK 505
Query: 495 EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVS 554
+ S N EAE ++ K+LI++ IG+ITPY +K L +++K++ +E+
Sbjct: 506 DSPSKYNPKEAEFVLSLCKKLIENNAKQEFIGVITPYKDHEEYIKKL-MENEKIEGIEIK 564
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGF 614
+VDGFQGREKE II+S+VR+N K+ +GFL D RR+NVA+TR +R+ +V D +T+S++
Sbjct: 565 SVDGFQGREKEIIIVSLVRANEKENIGFLDDIRRLNVAITRPKRKLIIVGDAKTLSTNQT 624
Query: 615 LKRLIEYFEEHAEYL 629
+ LI+Y ++ +YL
Sbjct: 625 YQHLIDYVKKEGKYL 639
>gi|359686101|ref|ZP_09256102.1| DNA and RNA helicase subunit [Leptospira santarosai str.
2000030832]
Length = 634
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 211/647 (32%), Positives = 347/647 (53%), Gaps = 33/647 (5%)
Query: 7 KEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQT 66
KE++ + S++E V A L + EK+ E S SR L K G T+ L +
Sbjct: 2 KERKFSSSIEELELVRAEL-EREKKEEDSLFSKDWLSRPLQDRVKLGITLYPLVYEEQSL 60
Query: 67 GLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF 126
G G +L F+ + P+ KF + V + N+ + + ++ L I VA
Sbjct: 61 GREGSWILTFRFPNQEEYPS-KFQSGAPVQIGKNEDRV------RAILVSLHGEKIRVAI 113
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLS---KGVQNGPAAGLIPVLFGEQKPTV 183
+++PE + L+ L +E +YR M AL Q++ KG + L+ + +G P
Sbjct: 114 EEVPEWIEDGKCFLDLLPDETSYREMFQALDQVASAAKGTRLYVNRELL-LGYGSPDPVA 172
Query: 184 LK---KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG 240
++ + N +L+ SQK+A+ + S++V ++HGPPGTGKTTT+ EI+ Q V+ G
Sbjct: 173 IRDGDRSRVLGRINPSLNDSQKNAVLHCVLSEDVSIVHGPPGTGKTTTLTEIVNQLVEEG 232
Query: 241 SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
KIL A ++ A D +VE + + ++RLGHPAR+ VL S LD ++ + L ++
Sbjct: 233 RKILVSAPTHSACDLLVESISAKGISVLRLGHPARIGEAVLNSTLDYKLFHHSDGKLLNE 292
Query: 301 IRKEMKALNGKLLKT------KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVL 354
RK++ ++ + K K++ RR + +E++ L K R ++ + +I + V++
Sbjct: 293 YRKDVIEISRQAKKYKRNFGEKEREERRNLFQEVKELKKTIRSMEKGLIDSLISSHPVIV 352
Query: 355 TTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA 414
+T + L+ +FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S
Sbjct: 353 STPVASSRSVLEGKTFDFCVLDESSQALEPASWIPILKSDRVILAGDHKQLPPTLFS--- 409
Query: 415 EKKGLGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS 473
++ L TLFE+ A+ L +L QYRM + I ++SS + Y++++K+ +RTS
Sbjct: 410 DRNSLETTLFEKAAERLEFSNRVFLLDTQYRMKDEISSFSSMEFYSNRLKSGRPMSERTS 469
Query: 474 STEPTLLL------IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGI 527
+ T ID AG D EE +DS +N EA++ + L ++ +I I
Sbjct: 470 NFPETFPFGNAFQWIDTAGTDSEEVS-MDDSIINPFEADLEVRLCILLQENNWPEEEITI 528
Query: 528 ITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
++PY AQV LL + ++ L ++VST+D FQGRE I++ VRSN + GFL + R
Sbjct: 529 LSPYRAQVRLLS-EKLREAGLFKVQVSTIDSFQGRENRCILLGFVRSNPEGRSGFLKESR 587
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
R+NV +TRAR + D+ T+ D FL +LI++ EE + + E+
Sbjct: 588 RINVGMTRARDLLLCIGDSSTLLEDPFLSKLIQFAEEKGVFRTAWEF 634
>gi|423226361|ref|ZP_17212827.1| hypothetical protein HMPREF1062_05013 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392629789|gb|EIY23795.1| hypothetical protein HMPREF1062_05013 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 627
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 185/495 (37%), Positives = 277/495 (55%), Gaps = 31/495 (6%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + + N A L ++ G KP + P+ L+ +Q++A
Sbjct: 141 DETSYRTMFEALSDVIRAKGN-RLAELRDIMLGTLKPGFRELYPVRFPW---LNSTQENA 196
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L+S++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 197 VNKVLNSRDVSIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWICEKLVDRG 256
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L + + S IRK M+ + GK + + E
Sbjct: 257 VNVLRIGNPTRVNDKMLSFTYERRFEGHPAYSELWSIRKAMREMGGK-----HRGSYEER 311
Query: 325 QKELRTLSKEERKRQQLAV---TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQA 381
+ +S+ + QL + D+ NA V+ +TL + R L+ F + IDEAAQA
Sbjct: 312 ESARNRMSRLRDRATQLEIQINADLFDNAHVIASTLVSSNHRILNGRHFGTLFIDEAAQA 371
Query: 382 LEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTV 441
LE ACWIA+ K R +LAGDH QLPPT++ EA + GL TL ER+ V S+L V
Sbjct: 372 LEAACWIAIRKADRVVLAGDHCQLPPTIKCYEAARGGLECTLMERVVANKPSTV-SLLKV 430
Query: 442 QYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK-------- 492
QYRMHE IM + S+ YN +++A P R + + ID + D +E+
Sbjct: 431 QYRMHEDIMKFPSQWFYNGELQAAPEIRYRGILDWDTPINWIDTSDMDFKEEFIGETFGR 490
Query: 493 --KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN 550
K E D + E +A + KR+++ + D GII+PY AQV L+ LK
Sbjct: 491 INKAEADLLLQELKAYIDRIGGKRMLEERI---DFGIISPYKAQVQYLRNKIKASGSLKP 547
Query: 551 ----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 606
+ V+TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR + ++ +
Sbjct: 548 YRSLLTVNTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLVILGEA 607
Query: 607 ETVSSDGFLKRLIEY 621
ET+ F K LIEY
Sbjct: 608 ETMKRHKFYKELIEY 622
>gi|456876620|gb|EMF91699.1| AAA domain protein [Leptospira santarosai str. ST188]
Length = 634
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 210/647 (32%), Positives = 347/647 (53%), Gaps = 33/647 (5%)
Query: 7 KEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQT 66
KE++ + S++E V A L + EK+ E S SR L K G T+ L +
Sbjct: 2 KERKFSSSIEELELVRAEL-EREKKEEDSLFSKDWLSRPLQDRVKLGITLYPLVYEEQSL 60
Query: 67 GLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF 126
G G +L F+ + P+ KF + V + N+ + + ++ L I VA
Sbjct: 61 GREGSWILTFRFPNQEEYPS-KFQSGAPVQIGKNEDRV------RAILVSLHGEKIRVAI 113
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLS---KGVQNGPAAGLIPVLFGEQKPTV 183
+++PE + L+ L +E +YR M AL Q++ KG + L+ + +G P
Sbjct: 114 EEVPEWIEDGKCFLDLLPDETSYREMFQALDQVASAAKGTRLYVNRELL-LGYGSPDPVA 172
Query: 184 LK---KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG 240
++ + N +L+ SQK+A+ + S++V ++HGPPGTGKTTT+ EI+ Q V+ G
Sbjct: 173 IRDGDRSRILGRINPSLNDSQKNAVLHCVLSEDVSIVHGPPGTGKTTTLTEIVNQLVEEG 232
Query: 241 SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
KIL A ++ A D +VE + + ++RLGHPAR+ VL S LD ++ + L ++
Sbjct: 233 RKILVSAPTHSACDLLVESISAKGISVLRLGHPARIGEAVLNSTLDYKLFHHSDGKLLNE 292
Query: 301 IRKEMKALNGKLLKT------KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVL 354
RK++ ++ + K K++ RR + +E++ L K R ++ + +I + V++
Sbjct: 293 YRKDVIEISRQAKKYKRNFGEKEREERRNLFQEVKELKKTIRSMEKGLIDSLISSHPVIV 352
Query: 355 TTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA 414
+T + L+ +FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S
Sbjct: 353 STPVASSRSVLEGKTFDFCVLDESSQALEPASWIPILKSDRVILAGDHKQLPPTLFS--- 409
Query: 415 EKKGLGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS 473
++ L TLFE+ A+ L +L QYRM + I ++SS + Y++++K+ +RTS
Sbjct: 410 DRNSLETTLFEKAAERLEFSNRVFLLDTQYRMKDEISSFSSMEFYSNRLKSGRPMSERTS 469
Query: 474 STEPTLLL------IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGI 527
+ T ID AG D EE +DS +N EA++ + L ++ +I I
Sbjct: 470 NFPETFPFGNAFQWIDTAGTDSEEVS-MDDSIINPFEADLEVRFCILLQENNWPEEEITI 528
Query: 528 ITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
++PY AQV LL + ++ L ++VST+D FQGRE +++ VRSN + GFL + R
Sbjct: 529 LSPYRAQVRLLS-EKLREAGLFKVQVSTIDSFQGRENRCVLLGFVRSNPEGRSGFLKESR 587
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
R+NV +TRAR + D+ T+ D FL +LI++ EE + + E+
Sbjct: 588 RINVGMTRARDLLLCIGDSSTLLEDPFLSKLIQFAEEKGVFRTAWEF 634
>gi|300727419|ref|ZP_07060828.1| DNA helicase [Prevotella bryantii B14]
gi|299775299|gb|EFI71898.1| DNA helicase [Prevotella bryantii B14]
Length = 614
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 208/634 (32%), Positives = 330/634 (52%), Gaps = 67/634 (10%)
Query: 29 EKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHK 88
EKEA + T G +R + K+G +K + + + LE T D+ H
Sbjct: 6 EKEAFRKQTETIGITRKV----KRGDAWFPVKVGKSFYNSLNQNALEIARTT-DLEIEHN 60
Query: 89 FGTHDVVVLKPNKADLGSPALGQGVV----YRLKDSSITVAFDD-------IPE------ 131
F + G PA V + + + TV+F D +PE
Sbjct: 61 F-------------EFGRPAAFFQVTDDGKLKYFNFTCTVSFVDGDRMVLIVPEGGSIID 107
Query: 132 -EGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAF 190
+G +P+ ++ +E +Y+ M +A+ ++ +N A L + + QK + F
Sbjct: 108 IQGCANPIGIQLFFDETSYKLMFEAIDRVINA-KNNRLAYLRDLFYSHQK----AERFTF 162
Query: 191 KPFN-SNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAAS 249
P L+ SQ+ A+++ L +K+V ++HGPPGTGKTTT+VE I + + R +++L CA S
Sbjct: 163 APTRFPWLNPSQEKAVNEVLWAKDVEVVHGPPGTGKTTTLVEAINETLMRENQVLVCAQS 222
Query: 250 NIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALN 309
N+AVD I E+LV + ++R+G+P ++ Q+L + + + IRK ++ L
Sbjct: 223 NMAVDWICEKLVDRGINVLRIGNPTKVNEQMLSFTYERRFEAHPDYPQLWAIRKTIRQLR 282
Query: 310 GKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS 369
+ D+ ++ + R E R QL A V+ +TL G+ +R L+
Sbjct: 283 SQKKGRDDRYHQKLEHLKARATELEIRINTQL-----FGEARVIASTLVGSANRILEGQK 337
Query: 370 FDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
F + IDEAAQALE ACWI + + +R ILAGDH QLPPT++S+ A K GLG+TL ER+ +
Sbjct: 338 FGTLFIDEAAQALEAACWIPMRRATRVILAGDHCQLPPTIKSLAALKAGLGKTLMERIVE 397
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCD 488
EV ++L VQYRM+E IM +SS Y+ +++ P R E ++ ID + +
Sbjct: 398 -NKPEVVTLLKVQYRMNEQIMQFSSNYFYHGEVETAPQIKYRGILDYEDPMMWIDTSEIE 456
Query: 489 M--------EEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHAS------DIGIITPYAAQ 534
+ E+ E +N+GEAE+ + + Q D+GII+PY AQ
Sbjct: 457 VGPDEPSFKEQFIGENFGRVNKGEAELTLRTLEEYFQKIGKTRILDENIDVGIISPYRAQ 516
Query: 535 VVLLKILRSKDDKLKN----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
V LK L K + K + V+TVDGFQG+E++ I+ISMVR+N ++GFL+D RRMN
Sbjct: 517 VQYLKKLIRKREFFKPYRKFISVNTVDGFQGQERDIILISMVRANDDGQIGFLNDLRRMN 576
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
VA+TRAR + ++ + +T+S F +L Y +E
Sbjct: 577 VAITRARMKLIILGNAQTMSKHPFYHQLWNYIQE 610
>gi|421110188|ref|ZP_15570689.1| AAA domain protein [Leptospira santarosai str. JET]
gi|410804373|gb|EKS10490.1| AAA domain protein [Leptospira santarosai str. JET]
Length = 634
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 211/647 (32%), Positives = 347/647 (53%), Gaps = 33/647 (5%)
Query: 7 KEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQT 66
KE++ + S++E V A L + EK+ E S SR L K G T+ L +
Sbjct: 2 KERKFSSSIEELELVRAEL-EREKKEEDSLFSKDWLSRPLQDRVKLGITLYPLVYEEQSF 60
Query: 67 GLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF 126
G G +L F+ + P+ KF + V + N+ + + V+ L I VA
Sbjct: 61 GREGSWILTFRFPNQEEYPS-KFQSGAPVQIGKNENRV------RAVLVSLHGEKIRVAI 113
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLS---KGVQNGPAAGLIPVLFGEQKPTV 183
+++PE + L+ L +E +YR M AL Q++ KG + L+ + +G P
Sbjct: 114 EEVPEWIEDGKCFLDLLPDETSYREMFQALDQVASAAKGTRLYVNRELL-LGYGSPDPVA 172
Query: 184 LK---KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG 240
++ + N +L+ SQK+A+ + S++V ++HGPPGTGKTTT+ EI+ Q V+ G
Sbjct: 173 IRDGDRSRILGRINPSLNDSQKNAVLHCVLSEDVSIVHGPPGTGKTTTLTEIVNQLVEEG 232
Query: 241 SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
KIL A ++ A D +VE + + ++RLGHPAR+ VL S LD ++ + L ++
Sbjct: 233 RKILVSAPTHSACDLLVESISAKGISVLRLGHPARIGEAVLNSTLDYKLFHHSDGKLLNE 292
Query: 301 IRKEMKALNGKLLKT------KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVL 354
RK++ ++ + K K++ RR + +E++ L K R ++ + +I + V++
Sbjct: 293 YRKDVIEISRQAKKYKRNFGEKEREERRNLFQEVKELKKTIRSMEKGLIDSLISSHPVIV 352
Query: 355 TTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA 414
+T + L+ +FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S
Sbjct: 353 STPVASSRSVLEGKTFDFCVLDESSQALEPASWIPILKSDRVILAGDHKQLPPTLFS--- 409
Query: 415 EKKGLGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS 473
++ L TLFE+ A+ L +L QYRM + I ++SS + Y++++K+ +RTS
Sbjct: 410 DRNSLETTLFEKAAERLEFSNRVFLLDTQYRMKDEISSFSSMEFYSNRLKSGRPMSERTS 469
Query: 474 STEPTLLL------IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGI 527
+ T ID AG D EE +DS +N EA++ + L ++ +I I
Sbjct: 470 NFPETFPFGNAFQWIDTAGTDSEEVS-MDDSIINPFEADLEVRLCILLQENNWPEEEITI 528
Query: 528 ITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
++PY AQV LL + ++ L ++VST+D FQGRE +++ VRSN + GFL + R
Sbjct: 529 LSPYRAQVRLLS-EKLREAGLFKVQVSTIDSFQGRENRCVLLGFVRSNPEGRSGFLKESR 587
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
R+NV +TRAR + D+ T+ D FL +LI++ EE + + E+
Sbjct: 588 RINVGMTRARDLLLCIGDSSTLLEDPFLSKLIQFAEEKGVFRTAWEF 634
>gi|198274180|ref|ZP_03206712.1| hypothetical protein BACPLE_00320 [Bacteroides plebeius DSM 17135]
gi|198272855|gb|EDY97124.1| putative DNA helicase [Bacteroides plebeius DSM 17135]
Length = 630
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 180/493 (36%), Positives = 281/493 (56%), Gaps = 28/493 (5%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN-SNLDHSQKD 203
+E +YR M +AL Q+ +N A L + G Q + +F+P L+ +Q +
Sbjct: 144 DETSYRLMFEALKQVISA-KNNRLAELRDIFHGTQPVSTF----SFQPVRFPWLNATQDE 198
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A++K L +K+V ++HGPPGTGKTTT+VE I + + R +++L CA SN+AVD I E+LV
Sbjct: 199 AVNKVLHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNMAVDWISEKLVDR 258
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
V ++R+G+P+R+ ++L + + + IRK ++ L +++ N R
Sbjct: 259 GVSVLRIGNPSRVNDKMLSFTYERRFESHPDYPQLWSIRKAIREL---YTRSRKGNDRES 315
Query: 324 IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALE 383
I++++ +L + + + A V+ TL G+ +R L F V IDEAAQALE
Sbjct: 316 IRQKINSLKDRATELEIRINESLFSEARVIACTLVGSANRLLTGQKFGTVFIDEAAQALE 375
Query: 384 IACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQY 443
ACWI L K R I AGDH QLPPTV++ EA + GLG TL + + EV S+L VQY
Sbjct: 376 AACWIPLRKADRVIWAGDHCQLPPTVKNPEALRAGLGHTLMQAIVK-NKPEVVSLLKVQY 434
Query: 444 RMHEHIMNWSSKQLYNSKIKAHPSGVKRTS-STEPTLLLIDIAGCDM-EEKKDEEDSTMN 501
RM++ IM +SS Y +++ P R+ + + ++ G D EE E +N
Sbjct: 435 RMNDEIMRFSSDWFYGGMLQSAPEVKYRSILDFDTPIEWVNTEGMDCNEEFVGENYGRIN 494
Query: 502 EGEAEVAMAHAK---------RLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN-- 550
+ EAE+++ K R ++ + D+G+I+PY AQV L+ L KD K
Sbjct: 495 KPEAELSIGQLKEYITKIGRERFLEERI---DVGLISPYKAQVQYLRQLVRKDAFFKPYR 551
Query: 551 --MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTET 608
+ ++TVDGFQG+E++ I+IS+VR+N ++GFL+D RRMNVA+TRAR + ++ D T
Sbjct: 552 SLITINTVDGFQGQERDVILISLVRANEDGQIGFLNDLRRMNVAITRARMKLIILGDAST 611
Query: 609 VSSDGFLKRLIEY 621
++ F K+L EY
Sbjct: 612 LTKHAFYKKLYEY 624
>gi|332663425|ref|YP_004446213.1| ATPase AAA [Haliscomenobacter hydrossis DSM 1100]
gi|332332239|gb|AEE49340.1| AAA ATPase [Haliscomenobacter hydrossis DSM 1100]
Length = 634
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 205/638 (32%), Positives = 337/638 (52%), Gaps = 27/638 (4%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
LQE + + + L+ +EK+ + S + + + KG L V + + +
Sbjct: 5 LQELIDI-SELLKIEKKEDFEQHRKLMDSLSPEQRRAKGLAWYPLNVVQQGYTIGERAFV 63
Query: 75 EFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD--DIPEE 132
+ T+G H+F + V +A + +P GV+Y + + + + D+P+
Sbjct: 64 VVERTQGKG-QEHQFRSGKTVRFYTQQAGVHNPERN-GVIYYVDKDKMRIILNTRDLPDW 121
Query: 133 GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKP 192
L ++ L +E TY M+ A+ ++ + G L VL G + D+ P
Sbjct: 122 MGMGQLSVDILFDERTYIEMEKAMHKVISATK-GRIQELRSVLLGIKPAHFTPLDM---P 177
Query: 193 FN-SNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNI 251
N L+ SQ A+++ L++++V ++HGPPGTGKTTT+V+ I +R +L A SN
Sbjct: 178 INIPALNPSQNLAVNQILAAQDVAVIHGPPGTGKTTTLVQAIKLLAEREKTVLVTAPSNT 237
Query: 252 AVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSS-------LASDIRKE 304
AVD + E+L +R+VR+G+ +R+ +L L+ Q+ + +S A+D R++
Sbjct: 238 AVDLLSEKLAELDLRVVRIGNISRIDESILRHTLEYQISQHPDSKNVKKVKIQAADYRRQ 297
Query: 305 MKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRK 364
L K + R+ +++E LS +Q V ++ A V+ TL GA
Sbjct: 298 ANRLRSKR-GYEAYEERKRLEQEASELSAWANSLEQRLVDMILDEAQVITCTLVGAAHPV 356
Query: 365 LDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLF 424
LD F I+DEAAQALE A WI + K S+ +L GD QLPPTV+S EA KKG T+
Sbjct: 357 LDQRKFRTAIVDEAAQALEPATWIPITKASKLVLTGDPFQLPPTVKSQEAAKKGFNITMI 416
Query: 425 ERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS--GVKRTSSTEPTLLLI 482
E+ L + ++L +QYRM+E IM +S++Q YN+++ A P + + + ++ I
Sbjct: 417 EKC--LKRLQQVNLLNIQYRMNEGIMGFSNRQFYNNELMAAPEVKDHRLDIAADAPVIFI 474
Query: 483 DIAGCDMEEK-KDEEDSTMNEGEAEVAMAHAKRLIQSGVH--ASDIGIITPYAAQVVLLK 539
D AGC +EK S N E +V H ++ ++ + I II+PY Q + ++
Sbjct: 475 DTAGCGFDEKVHHAYQSKYNPEEFQVLREHLYQIAEAFLEKIPPSIAIISPYREQALHME 534
Query: 540 ILRSKDDKLKNME--VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
D ++ ++ ++T+DGFQG+EK+ + IS+VRSN K E+GFLSD RRMNVA+TRAR
Sbjct: 535 DELKDDPMVRKLDLTINTIDGFQGQEKDLVFISLVRSNPKGEIGFLSDYRRMNVAMTRAR 594
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
+Q +V D+ T+ ++ F + +EY E EY S EY+
Sbjct: 595 KQLIIVGDSATIGNNKFYRDFLEYCEVVGEYRSAWEYM 632
>gi|71895701|ref|NP_001026346.1| immunoglobulin mu binding protein 2 [Gallus gallus]
gi|53136864|emb|CAG32761.1| hypothetical protein RCJMB04_35d21 [Gallus gallus]
Length = 742
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/310 (48%), Positives = 202/310 (65%), Gaps = 17/310 (5%)
Query: 343 VTDVIKNADVVLTTLTGAVS----RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCIL 398
+T + +A VVL T TGA S + L FDLV+IDE AQALE +CWI LLK +CIL
Sbjct: 1 MTAALTHASVVLATNTGASSDGPLKLLPENYFDLVVIDECAQALEASCWIPLLKAPKCIL 60
Query: 399 AGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLY 458
AGDH QLPPT+ S +A KGL +L ER+ + YG++V MLTVQYRMHE IM W+S ++Y
Sbjct: 61 AGDHKQLPPTIISHKAAAKGLSLSLMERVIERYGEKVVKMLTVQYRMHEAIMQWASSEMY 120
Query: 459 NSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCD-MEEKKDEEDSTMNEGEAEV 507
++ AHPS GV T T LLLID AGC +E + ++E S N GE ++
Sbjct: 121 GGRLTAHPSVAQHLLKDLPGVTCTEETTIPLLLIDTAGCGLLELEVEDEQSKGNPGEVQL 180
Query: 508 AMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAI 567
H + L+ +GV A D+ ++ PY QV +L+ + +E+ +VDGFQGREKEA+
Sbjct: 181 VGLHIQALVDAGVKARDVAVVAPYNLQVDMLR--EHLCHRYPELEIKSVDGFQGREKEAV 238
Query: 568 IISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAE 627
I+S VRSN K EVGFL++ RR+NVAVTRARR ++CD+ TV S FL RL+E+F +H +
Sbjct: 239 ILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAIICDSRTVGSQAFLGRLLEHFRQHGQ 298
Query: 628 YLSGSEYLNE 637
+ EYL++
Sbjct: 299 VRTAFEYLDD 308
>gi|418747088|ref|ZP_13303398.1| AAA domain protein [Leptospira santarosai str. CBC379]
gi|418755612|ref|ZP_13311809.1| AAA domain protein [Leptospira santarosai str. MOR084]
gi|409964074|gb|EKO31973.1| AAA domain protein [Leptospira santarosai str. MOR084]
gi|410791882|gb|EKR89827.1| AAA domain protein [Leptospira santarosai str. CBC379]
Length = 634
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 210/647 (32%), Positives = 347/647 (53%), Gaps = 33/647 (5%)
Query: 7 KEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQT 66
KE++ + S++E V A L + EK+ E S SR L K G T+ L +
Sbjct: 2 KERKFSSSIEELELVRAEL-EREKKEEDSLFSKDWLSRPLQDRVKLGITLYPLVYEEQSL 60
Query: 67 GLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF 126
G G +L F+ + P+ KF + V + N+ + + ++ L I VA
Sbjct: 61 GREGSWILTFRFPNQEEYPS-KFQSGAPVQIGKNEDRV------RAILVSLHGEKIRVAI 113
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLS---KGVQNGPAAGLIPVLFGEQKPTV 183
+++PE + L+ L +E +YR M AL Q++ KG + L+ + +G P
Sbjct: 114 EEVPEWIEDGKCFLDLLPDETSYREMFQALDQVASAAKGTRLYVNRELL-LGYGSPDPVA 172
Query: 184 LK---KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG 240
++ + N +L+ SQK+A+ + S++V ++HGPPGTGKTTT+ EI+ Q V+ G
Sbjct: 173 IRDGDRSRILGRINPSLNDSQKNAVLHCVLSEDVSIVHGPPGTGKTTTLTEIVNQLVEEG 232
Query: 241 SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
K+L A ++ A D +VE + + ++RLGHPAR+ VL S LD ++ + L ++
Sbjct: 233 RKVLVSAPTHSACDLLVESISAKGISVLRLGHPARIGEAVLNSTLDYKLFHHSDGKLLNE 292
Query: 301 IRKEMKALNGKLLKT------KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVL 354
RK++ ++ + K K++ RR + +E++ L K R ++ + +I + V++
Sbjct: 293 YRKDVIEISRQAKKYKRNFGEKEREERRNLFQEVKELKKTIRSMEKGLIDSLISSHPVIV 352
Query: 355 TTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA 414
+T + L+ +FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S
Sbjct: 353 STPVASSRSVLEGKTFDFCVLDESSQALEPASWIPILKSDRVILAGDHKQLPPTLFS--- 409
Query: 415 EKKGLGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS 473
++ L TLFE+ A+ L +L QYRM + I ++SS + Y++++K+ +RTS
Sbjct: 410 DRNSLETTLFEKAAERLEFSNRVFLLDTQYRMKDEISSFSSMEFYSNRLKSGRPMSERTS 469
Query: 474 STEPTLLL------IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGI 527
+ T ID AG D EE +DS +N EA++ + L ++ +I I
Sbjct: 470 NFPETFPFGNAFQWIDTAGTDSEEVS-MDDSIINPFEADLEVRLCILLQENNWPEEEITI 528
Query: 528 ITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
++PY AQV LL + ++ L ++VST+D FQGRE I++ VRSN + GFL + R
Sbjct: 529 LSPYRAQVRLLS-EKLREAGLFKVQVSTIDSFQGRENRCILLGFVRSNPEGRSGFLKESR 587
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
R+NV +TRAR + D+ T+ D FL +LI++ EE + + E+
Sbjct: 588 RINVGMTRARDLLLCIGDSSTLLEDPFLSKLIQFAEEKGVFRTAWEF 634
>gi|422003681|ref|ZP_16350909.1| DNA and RNA helicase subunit [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417257651|gb|EKT87048.1| DNA and RNA helicase subunit [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 634
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 210/647 (32%), Positives = 347/647 (53%), Gaps = 33/647 (5%)
Query: 7 KEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQT 66
KE++ + S++E V A L + EK+ E S SR L K G T+ L +
Sbjct: 2 KERKFSSSIEELELVRAEL-EREKKEEDSLFSKDWLSRPLQDRVKLGITLYPLVYEEQSF 60
Query: 67 GLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF 126
G G +L F+ + P+ KF + V + N+ + + ++ L I VA
Sbjct: 61 GREGSWILTFRFPNQEEYPS-KFQSGAPVQIGKNEDRV------RAILVSLHGEKIRVAI 113
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLS---KGVQNGPAAGLIPVLFGEQKPTV 183
+++PE + L+ L +E +YR M AL Q++ KG + L+ + +G P
Sbjct: 114 EEVPEWIEDGKCFLDLLPDETSYREMFQALDQVASAAKGTRLYVNRELL-LGYGSPDPVA 172
Query: 184 LK---KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG 240
++ + N +L+ SQK+A+ + S++V ++HGPPGTGKTTT+ EI+ Q V+ G
Sbjct: 173 IRDGDRSRILGRINPSLNDSQKNAVLHCVLSEDVSIVHGPPGTGKTTTLTEIVNQLVEEG 232
Query: 241 SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
K+L A ++ A D +VE + + ++RLGHPAR+ VL S LD ++ + L ++
Sbjct: 233 RKVLVSAPTHSACDLLVESISAKGISVLRLGHPARIGEAVLNSTLDYKLFHHSDGKLLNE 292
Query: 301 IRKEMKALNGKLLKT------KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVL 354
RK++ ++ + K K++ RR + +E++ L K R ++ + +I + V++
Sbjct: 293 YRKDVIEISRQAKKYKRNFGEKEREERRNLFQEVKELKKTIRSMEKGLIDSLISSHPVIV 352
Query: 355 TTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA 414
+T + L+ +FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S
Sbjct: 353 STPVASSRSVLEGKTFDFCVLDESSQALEPASWIPILKSDRVILAGDHKQLPPTLFS--- 409
Query: 415 EKKGLGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS 473
++ L TLFE+ A+ L +L QYRM + I ++SS + Y++++K+ +RTS
Sbjct: 410 DRNSLETTLFEKAAERLEFSNRVFLLDTQYRMKDEISSFSSMEFYSNRLKSGRPMPERTS 469
Query: 474 STEPTLLL------IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGI 527
+ T ID AG D EE +DS +N EA++ + L ++ +I I
Sbjct: 470 NFPETFPFGNAFQWIDTAGTDSEEVS-MDDSIINPFEADLEVRLCILLQENNWPEEEITI 528
Query: 528 ITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
++PY AQV LL + ++ L ++VST+D FQGRE I++ VRSN + GFL + R
Sbjct: 529 LSPYRAQVRLLS-EKLREAGLFKVQVSTIDSFQGRENRCILLGFVRSNPEGRSGFLKESR 587
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
R+NV +TRAR + D+ T+ D FL +LI++ EE + + E+
Sbjct: 588 RINVGMTRARDLLLCIGDSSTLLEDPFLSKLIQFAEEKGVFRTAWEF 634
>gi|340507668|gb|EGR33594.1| immunoglobulin mu binding protein 2, putative [Ichthyophthirius
multifiliis]
Length = 577
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 188/531 (35%), Positives = 289/531 (54%), Gaps = 41/531 (7%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
LQ+F+ +++ E EI + Q++G I LK +TGL G+TL
Sbjct: 2 LQQFLEKQKKILEEEHNVEIQEHNELLSQNTSIELQQQGYAINKLKLKSTKTGLYGRTLC 61
Query: 75 EF-------------QSTKGDVLPAHKFGTHD-VVVLKPNKADLGSPALGQGVVYRLKDS 120
F Q K LP KF D +++ K + AL GV+Y+ +
Sbjct: 62 TFAHPHYSKKSIENPQLQKSLQLPESKFSNGDNILIYKFDTYFDKKQALENGVIYKKTNF 121
Query: 121 SITVAFD-DI-PEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQ--NGPAAGLIPVLF 176
I ++FD D P N + L NE+TY+R L QLS+ N + LI VL
Sbjct: 122 KIIISFDKDFQPNRLQNEVISLVIETNEITYKRCAKTLDQLSQKYSDSNFQGSALIRVLI 181
Query: 177 GEQKPTV----------LKKDIAFKP-FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGK 225
P++ LK+D FN NL+ QK+A+ AL S N+ ++HGPPGTGK
Sbjct: 182 DGDDPSLQNNFVKQAHLLKQDTHLNDYFNQNLNKEQKEAVEFALKSPNIALIHGPPGTGK 241
Query: 226 TTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR--VRLVRLGHPARLLPQVLES 283
T+TV E+ILQ VK G K+LACA SNIAVDNIVERL R + +R+GHPAR++ ++ ES
Sbjct: 242 TSTVCELILQAVKMGMKVLACAGSNIAVDNIVERLQKQRQWCKALRIGHPARMIKEIYES 301
Query: 284 ALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAV 343
LD Q+ + + ++++E++ L K R++I+ L +L + R+++ +++
Sbjct: 302 CLDFQISKTPSYQEIKELKREIQKKLSDLNFEKSDFQRKKIKDFLSSLRQSIREQESVSI 361
Query: 344 TDVIKNADVVLTTLTGA----VSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILA 399
+V+ V+ T TGA +++ N FDL+IIDE AQ++E++CWI LLKG R + A
Sbjct: 362 KEVLNETQVICCTNTGADDYIFKKEMKNFIFDLIIIDECAQSMELSCWIPLLKGKRAVFA 421
Query: 400 GDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYN 459
GDH QL PT++S+E +K+ TLF+R+ + + + + +L QYRM+ IM +SS+ +YN
Sbjct: 422 GDHKQLQPTIKSLENKKES---TLFDRVHNQFP-QTSKLLQTQYRMNNLIMQFSSQFVYN 477
Query: 460 SKIKAHPSGVKRT--SSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVA 508
+++ AH S + + LL +D +G M E E+ S N GEA++
Sbjct: 478 NQLLAHDSVANHSICQDLDLVLLFVDTSGAKMGENVCEKGSKYNLGEADLV 528
>gi|333910064|ref|YP_004483797.1| DNA helicase [Methanotorris igneus Kol 5]
gi|333750653|gb|AEF95732.1| DNA helicase [Methanotorris igneus Kol 5]
Length = 654
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 221/667 (33%), Positives = 354/667 (53%), Gaps = 103/667 (15%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLE 75
+ +V+ LI+ E++ E+ R D ++ G IL+LK + L G ++
Sbjct: 5 EHYVNKFMKLIEKERKYEMDFH-REEIKRLGDKREEVGRAILHLKGRKLREEL-GSIIVR 62
Query: 76 FQSTKGDVLPAHKFGTHDVVVL---KPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEE 132
+ K + DVV++ P +DL G V + + I +AFD+ P +
Sbjct: 63 YGRKKP--FKRLEISVGDVVLISKGNPLHSDLF------GNVVEIGKNFIDIAFDEAPPK 114
Query: 133 GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKP 192
+R++ N++T++RMK AL + + + N L+ ++ G +P + K++ K
Sbjct: 115 WAYKDVRIDLYVNDITFKRMKKALNKF-RNINNK----LVGIILGIDEPR-MGKEVKVKF 168
Query: 193 FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIA 252
F+ NL+ SQK+A+ AL +K+++++HGPPGTGKT T+ E+I+QE R +K+LA A SNIA
Sbjct: 169 FDKNLNESQKNAVINALRAKDLYLIHGPPGTGKTRTITEVIIQECMRKNKVLATADSNIA 228
Query: 253 VDNIVERLVPH--RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG 310
DNI+ L + + +VR+GHP R+ +++E +L +V + + I++EM
Sbjct: 229 ADNILSNLSKYTKYINIVRIGHPTRISKELIEHSLFYKVEKHEKYKAIKKIKEEM----S 284
Query: 311 KLLKTKDKNTRREIQKELRTLSKEE-------RKRQQLAVTDVIKN-------------- 349
KL+ +DK ++ I K R +S EE K + DV+K+
Sbjct: 285 KLMDERDK-YKKPIPKWRRGMSDEEIVIFSKLNKDVRGVPRDVLKSMAKWIKTNEKIKKL 343
Query: 350 ------------------ADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL 391
ADVV+ T + A L+ FD+ +IDE +Q++E + I ++
Sbjct: 344 REKMKKIEEEIIKEIIRKADVVIATNSMAGCDFLEGFEFDVCVIDEGSQSMEPSALIPIV 403
Query: 392 KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN 451
K + I+AGDH QLPPTV S + E L +TLFERL Y + +S+L +QYRM+E IM
Sbjct: 404 KSKKLIMAGDHKQLPPTVLSEDEE---LKKTLFERLIKTYP-KFSSILKIQYRMNEKIME 459
Query: 452 WSSKQLYNSKIKAHPS-----------GV------KRTSSTEPTLLLIDIAGCDMEEKKD 494
+ +K Y++K+KAH S GV K + EP ++ ID+ G +EK+D
Sbjct: 460 FPNKAFYDNKLKAHDSVKSQTILDLIKGVEIDEEDKYIINEEP-VVFIDVKG---KEKRD 515
Query: 495 EED-STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEV 553
++ S NE EA+V + + + S +ITPY AQV L+ L +++EV
Sbjct: 516 KDSTSYYNEEEAKVVAKLVETFKKYNIPVS---VITPYDAQVKLISNL------CEDIEV 566
Query: 554 STVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG 613
STVDGFQG+E E IIIS VR+ ++ GFL D RR+NVA+TRA+R+ +V E +S +
Sbjct: 567 STVDGFQGKENEVIIISFVRT---EKFGFLEDLRRLNVAITRAKRKLVIVGCKELLSQNE 623
Query: 614 FLKRLIE 620
K L++
Sbjct: 624 TYKELVK 630
>gi|303236249|ref|ZP_07322845.1| putative DNA helicase [Prevotella disiens FB035-09AN]
gi|302483563|gb|EFL46562.1| putative DNA helicase [Prevotella disiens FB035-09AN]
Length = 641
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 188/503 (37%), Positives = 285/503 (56%), Gaps = 39/503 (7%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN-SNLDHSQKD 203
+E +Y+ M DAL K +G A L + + QK L F P L+ +Q+
Sbjct: 148 DETSYQMMFDALDHAIKAT-HGRLAHLRTIFYSNQKAERLN----FAPIRLPWLNPTQEK 202
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A+++ L +K+V ++HGPPGTGKTTT+VE I + + + S++L CA SN+AVD I E+LV
Sbjct: 203 AVNEVLWAKDVAVVHGPPGTGKTTTLVEAINETLMKESQVLVCAQSNMAVDWICEKLVDR 262
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKAL-NGKLLKTKDKNTRR 322
+ ++R+G+P R+ ++L + + + IRK ++ L NGK T + +
Sbjct: 263 GINVLRIGNPTRVNDKMLGFTYERRFEAHPDYDQLWAIRKAIRQLRNGKGRGTDSYHQKM 322
Query: 323 EIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQAL 382
+ K R E R QL A V+ +TL G+ SR ++ F + IDEAAQAL
Sbjct: 323 DRLKS-RATELEIRINSQL-----FGEARVIASTLVGSNSRIMEGQKFSTLFIDEAAQAL 376
Query: 383 EIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQ 442
E ACWI + + SR I AGDH QLPPTV+S+ A K GLG+TL ER+ + EV ++L VQ
Sbjct: 377 EAACWIPIRRASRVIFAGDHCQLPPTVKSIAALKAGLGKTLMERIVE-NKPEVVTLLKVQ 435
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDM--------EEKK 493
YRM+E IM +SS Y+ ++++ P R + +L +D + ++ E+
Sbjct: 436 YRMNEQIMRFSSDWFYHGEVESAPQIKYRGILDYDHPMLWLDTSEIEVGNDEPTFHEQFV 495
Query: 494 DEEDSTMNEGEAEVAMAH---------AKRLIQSGVHASDIGIITPYAAQVVLLKILRSK 544
E +N+GEAE+ + +R++ + D+G+I+PY AQV L+ L K
Sbjct: 496 GESYGRINKGEAELTLKTLQDYFTKIGKQRILDERI---DVGVISPYRAQVQYLRRLIKK 552
Query: 545 DDKLKN----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
+ K + V+TVDGFQG+E++ I+ISMVR+N E+GFL D RRMNVA+TRAR +
Sbjct: 553 REFFKPYRALISVNTVDGFQGQERDVILISMVRANENGEIGFLKDLRRMNVAITRARMKL 612
Query: 601 CLVCDTETVSSDGFLKRLIEYFE 623
++ + T+S F KRL EY +
Sbjct: 613 IILGNAATMSQHPFYKRLFEYIQ 635
>gi|149276566|ref|ZP_01882710.1| DNA helicase [Pedobacter sp. BAL39]
gi|149233086|gb|EDM38461.1| DNA helicase [Pedobacter sp. BAL39]
Length = 634
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 191/534 (35%), Positives = 291/534 (54%), Gaps = 24/534 (4%)
Query: 122 ITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKP 181
I V D++P+ + L ++ L ++ +Y M+ AL Q G A L+ L G + P
Sbjct: 105 IAVRIDELPDWARDGKLGVDVLFDQNSYDEMQHALKQADSIDGQGGTADLVKTLTGNRTP 164
Query: 182 TVLKKDIA-FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG 240
IA ++ +L+ Q+ A+ K LS+ ++ ++HGPPGTGKTTT+V+ + K+
Sbjct: 165 EF---SIAHYQYLIPSLNVMQQLAVDKILSADHLAIVHGPPGTGKTTTLVQAVKALSKQD 221
Query: 241 -SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLAS 299
+IL A SN AVD + E+L + ++R+G+P+R+ +++ LD+++ A
Sbjct: 222 HQQILVAAPSNTAVDLLTEKLAEQGLNVLRIGNPSRVSERLMSLTLDSRMAEHPEMKQAK 281
Query: 300 DIRKEMKALNGKLLKTK------DKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVV 353
++K+ K K +K R+ + E + KE +Q D+I ADV+
Sbjct: 282 ALKKQANEYKNMAHKYKRNFGKAEKEQRKALFDEAHKIMKEVGNIEQYVSDDIISKADVI 341
Query: 354 LTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVE 413
TL GA + + VIIDEA QALE ACWI ++K + I AGDH QL PT++S E
Sbjct: 342 AATLVGANHHTIRKLKYKTVIIDEAGQALEPACWIPIIKSEKVIFAGDHCQLSPTIKSNE 401
Query: 414 AEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS-GVKRT 472
A KKGL TL E++ + Y + V +L QYRM+ IM +SS+ Y K+KAH S
Sbjct: 402 AAKKGLSNTLMEKMVNQYPESVV-LLEEQYRMNRSIMEYSSEVFYQGKLKAHDSVATHLL 460
Query: 473 SSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQ------SGVHASDIG 526
+ LL ID AG EEK E S N EA + L+Q S +
Sbjct: 461 YDDDKPLLFIDTAGASFEEKT-EGHSISNPDEASFVSKQLETLVQELSLRYSIEDFPTVA 519
Query: 527 IITPYAAQVVLLKIL--RSKD-DKLKN-MEVSTVDGFQGREKEAIIISMVRSNSKKEVGF 582
II+PY Q+V +K L S D DK K+ + V+T+D FQG+E++ ++ISMVRSN + +GF
Sbjct: 520 IISPYKQQIVHIKELLQHSPDIDKFKSKISVNTIDSFQGQERDVVVISMVRSNDEGIIGF 579
Query: 583 LSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLN 636
L+D RRMNVA+TRAR++ ++ D+ T+ F + I Y ++ Y S E++N
Sbjct: 580 LADIRRMNVAMTRARKKLIVIGDSATLCRLPFYENFIAYAQKLDAYQSVWEFIN 633
>gi|359689939|ref|ZP_09259940.1| DNA and RNA helicase [Leptospira licerasiae serovar Varillal str.
MMD0835]
gi|418748881|ref|ZP_13305173.1| AAA domain protein [Leptospira licerasiae str. MMD4847]
gi|418757762|ref|ZP_13313949.1| hypothetical protein LEP1GSC185_3128 [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384115539|gb|EIE01797.1| hypothetical protein LEP1GSC185_3128 [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|404275950|gb|EJZ43264.1| AAA domain protein [Leptospira licerasiae str. MMD4847]
Length = 627
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 211/636 (33%), Positives = 332/636 (52%), Gaps = 52/636 (8%)
Query: 29 EKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHK 88
E++AE+ S +L+ + G T+ L DA+ G G + + TK +P
Sbjct: 16 ERKAELDKYKEEIYSSDLNKRVQDGFTVFPLVFEDAELGADGNWKVLLKPTKSKNIPELF 75
Query: 89 FGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVT 148
V ++K ++ + V+ + + S V +++P+ L LE L +E +
Sbjct: 76 RPGTPVRIVKESEEYIS-------VLLKANEDSYLVYMEEVPDWVEEGKLALEILPDETS 128
Query: 149 YRRMKDAL---IQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNS---NLDHSQK 202
++ AL I KG + A L KP FKP ++ L+ SQK
Sbjct: 129 FKEWDRALEKVISAKKGSREKYFADLFSNELEVSKPN-------FKPLSNLPETLNDSQK 181
Query: 203 DAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVP 262
A+S L +++ ++HGPPGTGKT T+VE I G +ILA A +N A D +VE L
Sbjct: 182 KAVSAILQTEDFVLVHGPPGTGKTKTIVEAIRILASEGKRILASAPTNSASDLLVESLEK 241
Query: 263 HRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK------ 316
+V ++R+GHPAR+ P +L+++L+ ++ S L RKE++ L K K K
Sbjct: 242 LKVPVLRIGHPARMNPDILQNSLEMKLNHSPESKLIERDRKEVQELLKKARKYKRSFGKE 301
Query: 317 DKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIID 376
+ RR + KE +L K ++RQ++ V ++++ V++ T TGA S L N FD I+D
Sbjct: 302 EAEERRSLYKEADSLRKSIKERQKVLVRYLLESHPVIVCTHTGASSYLLHNLDFDYAILD 361
Query: 377 EAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGD-EV 435
E +QA+E + WI +LK ++ ++AGD QLPPTV S E L +L ERL + D E
Sbjct: 362 EGSQAIEPSSWIPILKANKFVIAGDPFQLPPTVIS---EDPLLKVSLMERLLPAFQDKER 418
Query: 436 TSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT-------SSTEP---TLLLIDIA 485
+L QYRM + I + + + Y +K+K SG++ S EP +L+ +D +
Sbjct: 419 VFLLDTQYRMTDPIQTFPNLKFYENKLK---SGLETDLREKTPFDSGEPFGSSLVFLDSS 475
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK-----I 540
G D E ++ E S N EAE + KR++ SG + +++PY Q LL+ I
Sbjct: 476 GTDTAE-ENSEGSLGNPWEAEFTVNIVKRILDSGWDPKGLILLSPYRYQRYLLRQKLEEI 534
Query: 541 LRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
L +L EV TVD FQGRE +A++ S+VRSNS+ ++GFLS+ RR NV +TRA++
Sbjct: 535 LPEHSSQL---EVETVDSFQGRESDAVVFSLVRSNSEGQIGFLSETRRWNVGMTRAKKLL 591
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLN 636
+V D T+ + F K L+E E E + E+L+
Sbjct: 592 VMVGDGSTLGQNDFFKDLLETVELAGELRTAWEFLD 627
>gi|15679629|ref|NP_276746.1| transcriptional control factor (enhancer-binding protein)
[Methanothermobacter thermautotrophicus str. Delta H]
gi|2622761|gb|AAB86107.1| transcriptional control factor (enhancer-binding protein)
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 642
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 217/659 (32%), Positives = 351/659 (53%), Gaps = 103/659 (15%)
Query: 28 LEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAH 87
+E+EAEISA + R L Q++ + A GL GK G L H
Sbjct: 1 MEREAEISAMMNE--IRRLSPRQRE-------RARRAVNGLNGKI-------TGRELGFH 44
Query: 88 --KFGTHDVVVLKPNKADL-----GSPALGQ--GVVYRLKDSSITVAFDDIPEEGLNSPL 138
K+G D + + + DL G+P G V + VA + +P L + +
Sbjct: 45 LVKYGRRDPIDTQISVGDLVLISRGNPLRSDLTGTVAMKGKRFLVVALEHVPGWALKN-V 103
Query: 139 RLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLD 198
R++ AN+VT++RM D L ++ V ++ L G +KP+ + F+ + L+
Sbjct: 104 RIDLYANDVTFQRMIDNLKSPTRNVLR-----VLGFLCGTEKPSDGVDVVDFQAVDPELN 158
Query: 199 HSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVE 258
SQ+DAI AL S++ F++HGP GTGKT T+ E+I QEV RGS++L A SN AVDN++E
Sbjct: 159 ESQRDAIRMALGSEDFFLIHGPFGTGKTRTLHELIRQEVMRGSRVLVTAESNAAVDNLLE 218
Query: 259 RLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDK 318
+ H V+ VRLGHP R+ + L L ++ +N S +R+ + ++ +L++ +++
Sbjct: 219 GIAGH-VKCVRLGHPQRVSRENLRETLAYKI---ENHPEYSKVREYQEKID-ELIEERER 273
Query: 319 NTRR--EIQKEL---------------------------RTLSKEER--------KRQQL 341
+ + +I++ L R + +R + ++
Sbjct: 274 HQKPTPQIRRGLSDTQILINATKRRGARGISPNVMISMARWIETNQRIDDLHSKLQEAEM 333
Query: 342 AVTD-VIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAG 400
+ D +++ + VVL+T + A +D FD+ I+DEA+QA + I L + R ILAG
Sbjct: 334 RIADRILRESQVVLSTNSSAALEYIDGLRFDVAIVDEASQATIPSILIPLARAPRFILAG 393
Query: 401 DHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNS 460
DH QLPPT+ S +A + L RTLFE L + + ML QYRMH IM + +++ Y+
Sbjct: 394 DHRQLPPTILSRDASE--LERTLFEELIKRHPGR-SRMLNCQYRMHPAIMEFPNREFYDG 450
Query: 461 KIKAHPS-----------------GVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTM-NE 502
+I+AHPS ++ + +P +L ID +G D E++ + +++ N
Sbjct: 451 RIRAHPSLEDISIRDIIEDVPDSDICQKLADPDP-VLFIDTSGLDGCERRLKGSTSIQNP 509
Query: 503 GEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGR 562
EA++A+ ++ L++ GV +IGIITPY QV L+ + ++EV++VDGFQGR
Sbjct: 510 LEADLAVIISRSLMRMGVKPEEIGIITPYDDQVDLIS-------SMIDVEVNSVDGFQGR 562
Query: 563 EKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEY 621
EK+ IIISMVRSN +GFL D RR+NV++TRARR+ ++ D+ T+S+ +RL E+
Sbjct: 563 EKDVIIISMVRSNRNGSIGFLKDLRRLNVSLTRARRKLIIIGDSRTLSAHPSYRRLTEF 621
>gi|224536127|ref|ZP_03676666.1| hypothetical protein BACCELL_00992 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522261|gb|EEF91366.1| hypothetical protein BACCELL_00992 [Bacteroides cellulosilyticus
DSM 14838]
Length = 627
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 184/495 (37%), Positives = 276/495 (55%), Gaps = 31/495 (6%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + + N A L ++ G KP + P+ L+ +Q++A
Sbjct: 141 DETSYRTMFEALSDVIRAKGN-RLAELRDIMLGTLKPGFRELYPVRFPW---LNSTQENA 196
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L+S++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 197 VNKVLNSRDVSIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWICEKLVDRG 256
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L + + S IRK M+ + GK + + E
Sbjct: 257 VNVLRIGNPTRVNDKMLSFTYERRFEGHPAYSELWSIRKAMREIGGK-----HRGSYEER 311
Query: 325 QKELRTLSKEERKRQQLAV---TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQA 381
+ +S+ + QL + D+ NA V+ +TL + R L+ F + IDEAAQA
Sbjct: 312 ESARNRMSRLRDRATQLEIQINADLFDNAHVIASTLVSSNHRILNGRHFGTLFIDEAAQA 371
Query: 382 LEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTV 441
LE ACWIA+ K R +LAGDH QLPPT++ EA + GL TL ER+ V S+L V
Sbjct: 372 LEAACWIAIRKADRVVLAGDHCQLPPTIKCYEAARGGLECTLMERVVANKPSTV-SLLKV 430
Query: 442 QYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK-------- 492
QYRMHE IM + S+ YN +++A P R + + ID + D +E+
Sbjct: 431 QYRMHEDIMKFPSQWFYNGELQAAPEIRYRGILDWDTPINWIDTSDMDFKEEFIGETFGR 490
Query: 493 --KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN 550
K E D + E + + KR+++ + D GII+PY AQV L+ LK
Sbjct: 491 INKAEADLLLQELKVYIDRIGGKRVLEERI---DFGIISPYKAQVQYLRNKIKASGSLKP 547
Query: 551 ----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 606
+ V+TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR + ++ +
Sbjct: 548 YRSLLTVNTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLVILGEA 607
Query: 607 ETVSSDGFLKRLIEY 621
ET+ F K LIEY
Sbjct: 608 ETMKRHKFYKELIEY 622
>gi|410451573|ref|ZP_11305576.1| AAA domain protein [Leptospira sp. Fiocruz LV3954]
gi|410014617|gb|EKO76746.1| AAA domain protein [Leptospira sp. Fiocruz LV3954]
Length = 634
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 210/647 (32%), Positives = 347/647 (53%), Gaps = 33/647 (5%)
Query: 7 KEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQT 66
KE++ + S++E V A L + EK+ E S SR L K G T+ L +
Sbjct: 2 KERKFSSSIEELELVRAEL-EREKKEEDSLFSKDWLSRLLQDRVKLGITLYPLVYEEQSL 60
Query: 67 GLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF 126
G G +L F+ + P+ KF + V + N+ + + ++ L I VA
Sbjct: 61 GREGSWILTFRFPNQEEYPS-KFQSGAPVQIGKNEDRV------RAILVSLHGEKIRVAI 113
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLS---KGVQNGPAAGLIPVLFGEQKPTV 183
+++PE + L+ L +E +YR M AL Q++ KG + L+ + +G P
Sbjct: 114 EEVPEWIEDGKCFLDLLPDETSYREMFQALDQVASAAKGTRLYVNRELL-LGYGSPDPVA 172
Query: 184 LK---KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG 240
++ + N +L+ SQK+A+ + S++V ++HGPPGTGKTTT+ EI+ Q V+ G
Sbjct: 173 IRDGDRSRILGRINPSLNDSQKNAVLHCVLSEDVSIVHGPPGTGKTTTLTEIVNQLVEEG 232
Query: 241 SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
KIL A ++ A D +VE + + ++RLGHPAR+ VL S LD ++ + L ++
Sbjct: 233 RKILVSAPTHSACDLLVESISAKGISVLRLGHPARIGEAVLNSTLDYKLFHHSDGKLLNE 292
Query: 301 IRKEMKALNGKLLKT------KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVL 354
RK++ ++ + K K++ RR + +E++ L K R ++ + +I + V++
Sbjct: 293 YRKDVIEISRQAKKYKRNFGEKEREERRNLFQEVKELKKTIRSMEKGLIDSLISSHPVIV 352
Query: 355 TTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA 414
+T + L+ +FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S
Sbjct: 353 STPVASSRSVLEGKTFDFCVLDESSQALEPASWIPILKSDRVILAGDHKQLPPTLFS--- 409
Query: 415 EKKGLGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS 473
++ L TLFE+ A+ L +L QYRM + I ++SS + Y++++K+ +RTS
Sbjct: 410 DRNSLETTLFEKAAERLEFSNRVFLLDTQYRMKDEISSFSSMEFYSNRLKSGRPMSERTS 469
Query: 474 STEPTLLL------IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGI 527
+ T ID AG D EE +DS +N EA++ + L ++ +I I
Sbjct: 470 NFPETFPFGNAFQWIDTAGTDSEEVS-MDDSIINPFEADLEVRLCILLQENDWPEEEITI 528
Query: 528 ITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
++PY AQV LL + ++ L ++VST+D FQGRE +++ VRSN + GFL + R
Sbjct: 529 LSPYRAQVRLLS-EKLREAGLFKVQVSTIDSFQGRENRCVLLGFVRSNPEGRSGFLKESR 587
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
R+NV +TRAR + D+ T+ D FL +LI++ EE + + E+
Sbjct: 588 RINVGMTRARDLLLCIGDSSTLLEDPFLSKLIQFAEEKGVFRTAWEF 634
>gi|145351793|ref|XP_001420247.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580481|gb|ABO98540.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 464
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 183/466 (39%), Positives = 263/466 (56%), Gaps = 59/466 (12%)
Query: 214 VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERL-VPHRVRLVRLGH 272
V + GPPGTGKT+ VVEII Q RG ++LACA SN+AVDN+VERL VR VR G
Sbjct: 1 VVCIQGPPGTGKTSVVVEIIAQAAARGERVLACAPSNLAVDNLVERLDGVTDVRAVRFGA 60
Query: 273 PARLLPQVLESALDAQVLRGDNSSL------ASDIRKEMKALNGKLLKTKD--KNTRREI 324
P R+ L +LDA+V +S+ +++AL + K + K R ++
Sbjct: 61 PERISAAALSCSLDAKVSEATELFFQTQRVESSETSTKLRALMDRYQKATNVPKKQREKL 120
Query: 325 QKELRTLSKEER-------KRQQLAVTDVIKNADVVLTTLTGAVSRKLDN-TSFDLVIID 376
Q E+ L K+ + K ++ + +++ A+VVL T GA + FDLV++D
Sbjct: 121 QSEIEALKKKLKTTVSAGTKHRKASQAKILREANVVLATNAGAGMDTVQQLPPFDLVVVD 180
Query: 377 EAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERL--------- 427
EAAQA E WI L++G R +L GD QL P V+S+EA + GL R+L RL
Sbjct: 181 EAAQASEPLSWIPLVRGRRAVLIGDPCQLAPVVRSLEAVEAGLARSLMSRLMPAPENLDD 240
Query: 428 ------ADLYGDE--VTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GV 469
A Y +T L+ QYR HE I +WSS++ Y +++A S GV
Sbjct: 241 EDDGWNARAYASSGVLTLTLSTQYRSHETISSWSSREAYGGRLRAAESVRGALLRDLPGV 300
Query: 470 KRTSSTEPTLLLIDI--------AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVH 521
+ T T +L+I A C+ ++ S +NEGEA A AH ++++GV
Sbjct: 301 QDTQITRIPMLMITARSPYGRIPAECN---ERRVGGSYINEGEATTAAAHVLMMLKAGVR 357
Query: 522 ASDIGIITPYAAQVVLLK-ILRSKDDKLKN---MEVSTVDGFQGREKEAIIISMVRSNSK 577
ASDI +I+PYAAQV LL+ +L + ++ +E+S++D FQGRE E +IIS VRSN++
Sbjct: 358 ASDIAVISPYAAQVRLLRSVLAVALEDVEGADAVEISSIDSFQGREAECVIISTVRSNAR 417
Query: 578 KEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFE 623
+ VGFLSD RRMNVAVTR +R ++ D +T+ D FL+RL+E+ E
Sbjct: 418 RGVGFLSDNRRMNVAVTRGKRHVTIIGDDKTIMGDAFLRRLVEHIE 463
>gi|345518256|ref|ZP_08797710.1| hypothetical protein BSFG_02007 [Bacteroides sp. 4_3_47FAA]
gi|254835551|gb|EET15860.1| hypothetical protein BSFG_02007 [Bacteroides sp. 4_3_47FAA]
Length = 630
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 180/492 (36%), Positives = 284/492 (57%), Gaps = 26/492 (5%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL Q+ K N A L + G QK P+ L+++Q++A
Sbjct: 144 DETSYRLMFEALGQVLKAKGNR-LAELREIFHGSQKAETFSFGFTRFPW---LNNTQEEA 199
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K + +K+V ++HGPPGTGKTTT+VE I + + R ++++ CA SN+AVD I E+LV
Sbjct: 200 VNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNMAVDWISEKLVDRG 259
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L + + + IRK ++ L G+ K ++ R+
Sbjct: 260 VPVLRIGNPTRVNDKMLAFTYERRFESHPDYPQLWSIRKAIRELYGRSRKGAERENIRQK 319
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
L+ + E R A+ A V+ TL + +R L F + IDEAAQALE
Sbjct: 320 INSLKDRATELEIRVNEAL---FGEARVIACTLVSSANRILTGRKFSTLFIDEAAQALEP 376
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R ILAGD+ QLPPT++ +EA + GL RTL + +AD D V S+L VQYR
Sbjct: 377 ACWIAIRKADRVILAGDYCQLPPTIKCMEAARGGLDRTLMQEIADNKPDTV-SLLKVQYR 435
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLL-LIDIAGCDM-EEKKDEEDSTMNE 502
M++ IM +SS+ Y ++K+ P R+ T + I+ G + EE E +N+
Sbjct: 436 MNDEIMRFSSEWFYQGELKSAPEVKYRSILDYDTPIEWINTEGMECNEEFVGESFGRINK 495
Query: 503 GEAEVAMAH---------AKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN--- 550
EA ++++ R ++ + D+G+I+PY AQV L+ L +D K
Sbjct: 496 EEAALSISQLTNYINKIGKDRFLEERI---DVGLISPYKAQVQYLRQLIKRDAFFKPYRH 552
Query: 551 -MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
+ ++TVDGFQG+E++ I+IS+VR+N + ++GFL+D RRMNVA+TRAR + ++ D T+
Sbjct: 553 LITINTVDGFQGQERDVILISLVRANEEGQIGFLNDLRRMNVAITRARMKLIILGDASTL 612
Query: 610 SSDGFLKRLIEY 621
+ F K+L EY
Sbjct: 613 TKHPFYKKLYEY 624
>gi|319643934|ref|ZP_07998509.1| helicase [Bacteroides sp. 3_1_40A]
gi|317384458|gb|EFV65425.1| helicase [Bacteroides sp. 3_1_40A]
Length = 630
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 180/492 (36%), Positives = 284/492 (57%), Gaps = 26/492 (5%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL Q+ K N A L + G QK P+ L+++Q++A
Sbjct: 144 DETSYRLMFEALGQVLKAKGNR-LAELREIFHGSQKAETFSFGFTRFPW---LNNTQEEA 199
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K + +K+V ++HGPPGTGKTTT+VE I + + R ++++ CA SN+AVD I E+LV
Sbjct: 200 VNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNMAVDWISEKLVDRG 259
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L + + + IRK ++ L G+ K ++ R+
Sbjct: 260 VPVLRIGNPTRVNDKMLAFTYERRFESHPDYPQLWSIRKAIRELYGRSRKGAERENIRQK 319
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
L+ + E R A+ A V+ TL + +R L F + IDEAAQALE
Sbjct: 320 INSLKDRATELEIRINEAL---FGEARVIACTLVSSANRILTGRKFSTLFIDEAAQALEP 376
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R ILAGD+ QLPPT++ +EA + GL RTL + +AD D V S+L VQYR
Sbjct: 377 ACWIAIRKADRVILAGDYCQLPPTIKCMEAARGGLDRTLMQEIADNKPDTV-SLLKVQYR 435
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLL-LIDIAGCDM-EEKKDEEDSTMNE 502
M++ IM +SS+ Y ++K+ P R+ T + I+ G + EE E +N+
Sbjct: 436 MNDEIMRFSSEWFYQGELKSAPEVKYRSILDYDTPIEWINTEGMECNEEFVGESFGRINK 495
Query: 503 GEAEVAMAH---------AKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN--- 550
EA ++++ R ++ + D+G+I+PY AQV L+ L +D K
Sbjct: 496 EEAALSISQLTNYINKIGKDRFLEERI---DVGLISPYKAQVQYLRQLIKRDAFFKPYRH 552
Query: 551 -MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
+ ++TVDGFQG+E++ I+IS+VR+N + ++GFL+D RRMNVA+TRAR + ++ D T+
Sbjct: 553 LITINTVDGFQGQERDVILISLVRANEEGQIGFLNDLRRMNVAITRARMKLIILGDASTL 612
Query: 610 SSDGFLKRLIEY 621
+ F K+L EY
Sbjct: 613 TKHPFYKKLYEY 624
>gi|423312487|ref|ZP_17290424.1| hypothetical protein HMPREF1058_01036 [Bacteroides vulgatus
CL09T03C04]
gi|392688175|gb|EIY81464.1| hypothetical protein HMPREF1058_01036 [Bacteroides vulgatus
CL09T03C04]
Length = 630
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 180/492 (36%), Positives = 284/492 (57%), Gaps = 26/492 (5%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL Q+ K N A L + G QK P+ L+++Q++A
Sbjct: 144 DETSYRLMFEALGQVLKAKGNR-LAELREIFHGNQKAETFSFGFTRFPW---LNNTQEEA 199
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K + +K+V ++HGPPGTGKTTT+VE I + + R ++++ CA SN+AVD I E+LV
Sbjct: 200 VNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNMAVDWISEKLVDRG 259
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L + + + IRK ++ L G+ K ++ R+
Sbjct: 260 VPVLRIGNPTRVNDKMLAFTYERRFESHPDYPQLWSIRKAIRELYGRSRKGAERENIRQK 319
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
L+ + E R A+ A V+ TL + +R L F + IDEAAQALE
Sbjct: 320 INSLKDRATELEIRINEAL---FGEARVIACTLVSSANRILTGRKFSTLFIDEAAQALEP 376
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R ILAGD+ QLPPT++ +EA + GL RTL + +AD D V S+L VQYR
Sbjct: 377 ACWIAIRKADRVILAGDYCQLPPTIKCMEAARGGLDRTLMQEIADNKPDTV-SLLKVQYR 435
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLL-LIDIAGCDM-EEKKDEEDSTMNE 502
M++ IM +SS+ Y ++K+ P R+ T + I+ G + EE E +N+
Sbjct: 436 MNDEIMRFSSEWFYQGELKSAPEVKYRSILDYDTPIEWINTEGMECNEEFVGESFGRINK 495
Query: 503 GEAEVAMAH---------AKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN--- 550
EA ++++ R ++ + D+G+I+PY AQV L+ L +D K
Sbjct: 496 EEAALSISQLTNYINKIGKDRFLEERI---DVGLISPYKAQVQYLRQLIKRDAFFKPYRH 552
Query: 551 -MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
+ ++TVDGFQG+E++ I+IS+VR+N + ++GFL+D RRMNVA+TRAR + ++ D T+
Sbjct: 553 LITINTVDGFQGQERDVILISLVRANEEGQIGFLNDLRRMNVAITRARMKLIILGDASTL 612
Query: 610 SSDGFLKRLIEY 621
+ F K+L EY
Sbjct: 613 TKHPFYKKLYEY 624
>gi|150004508|ref|YP_001299252.1| helicase [Bacteroides vulgatus ATCC 8482]
gi|149932932|gb|ABR39630.1| putative helicase [Bacteroides vulgatus ATCC 8482]
Length = 630
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 180/492 (36%), Positives = 284/492 (57%), Gaps = 26/492 (5%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL Q+ K N A L + G QK P+ L+++Q++A
Sbjct: 144 DETSYRLMFEALGQVLKAKGNR-LAELREIFHGNQKAETFSFGFTRFPW---LNNTQEEA 199
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K + +K+V ++HGPPGTGKTTT+VE I + + R ++++ CA SN+AVD I E+LV
Sbjct: 200 VNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNMAVDWISEKLVDRG 259
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L + + + IRK ++ L G+ K ++ R+
Sbjct: 260 VPVLRIGNPIRVNDKMLAFTYERRFESHPDYPQLWSIRKAIRELYGRSRKGAERENIRQK 319
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
L+ + E R A+ A V+ TL + +R L F + IDEAAQALE
Sbjct: 320 INSLKDRATELEIRINEAL---FGEARVIACTLVSSANRILTGRKFSTLFIDEAAQALEP 376
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R ILAGD+ QLPPT++ +EA + GL RTL + +AD D V S+L VQYR
Sbjct: 377 ACWIAIRKADRVILAGDYCQLPPTIKCMEAARGGLDRTLMQEIADNKPDTV-SLLKVQYR 435
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLL-LIDIAGCDM-EEKKDEEDSTMNE 502
M++ IM +SS+ Y ++K+ P R+ T + I+ G + EE E +N+
Sbjct: 436 MNDEIMRFSSEWFYQGELKSAPEVKYRSILDYDTPIEWINTEGMECNEEFVGESFGRINK 495
Query: 503 GEAEVAMAH---------AKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN--- 550
EA ++++ R ++ + D+G+I+PY AQV L+ L +D K
Sbjct: 496 EEAALSISQLTNYINKIGKDRFLEERI---DVGLISPYKAQVQYLRQLIKRDAFFKPYRH 552
Query: 551 -MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
+ ++TVDGFQG+E++ I+IS+VR+N + ++GFL+D RRMNVA+TRAR + ++ D T+
Sbjct: 553 LITINTVDGFQGQERDVILISLVRANEEGQIGFLNDLRRMNVAITRARMKLIILGDASTL 612
Query: 610 SSDGFLKRLIEY 621
+ F K+L EY
Sbjct: 613 TKHPFYKKLYEY 624
>gi|329961517|ref|ZP_08299598.1| putative DNA helicase [Bacteroides fluxus YIT 12057]
gi|328531729|gb|EGF58558.1| putative DNA helicase [Bacteroides fluxus YIT 12057]
Length = 627
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 178/499 (35%), Positives = 283/499 (56%), Gaps = 24/499 (4%)
Query: 138 LRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNL 197
L ++ +E +YR M +AL +S+ N + L ++ G KP + P+ L
Sbjct: 134 LGIQLYFDETSYRTMFEALEDVSRSKGN-RLSELRDIMLGTGKPGFRELYPVRFPW---L 189
Query: 198 DHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIV 257
+ +Q+ A++K L +K+V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I
Sbjct: 190 NSTQETAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWIS 249
Query: 258 ERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKD 317
E+L+ V ++R+G+P R+ ++L + + + IRK ++ L+G+ + +
Sbjct: 250 EKLIDRGVNVLRIGNPTRVNDKMLSFTYERRFEGHPLYTELWSIRKNLRELSGRS-RRGN 308
Query: 318 KNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDE 377
+ R I+ + L + D+ A V+ +TL + R L+ F + IDE
Sbjct: 309 YDEREGIRNRMSRLRDRATALEIQINADLFDGAHVIASTLVSSNHRLLNGHRFGTLFIDE 368
Query: 378 AAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS 437
AAQALE ACWIA+ K R +LAGDH QLPPT++ EA + GL RTL E++ V S
Sbjct: 369 AAQALEAACWIAIRKADRVVLAGDHCQLPPTIKCHEAARGGLERTLMEKVVSSKPSTV-S 427
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAHPS-GVKRTSSTEPTLLLIDIAGCDMEEK---- 492
+L VQYRMHE IM +SS+ YN +++A P + + + ID + D +E+
Sbjct: 428 LLKVQYRMHEDIMKFSSQWFYNGELEAAPEVRCRGILDWDSPISWIDTSDMDFKEEFVGE 487
Query: 493 ------KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDD 546
KDE + + E ++ + + R+++ + D GII+PY AQV L+ D
Sbjct: 488 TFGRINKDEANLLLQELKSYITRIGSNRILEERI---DFGIISPYRAQVQYLRNKIKTDA 544
Query: 547 KLKN----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCL 602
LK + V+TVDGFQG+E++ I IS+VR+N + ++GFL+D RRMNVA+TRAR + +
Sbjct: 545 SLKPYRSLLTVNTVDGFQGQERDVIFISLVRANEEGQIGFLNDLRRMNVAITRARMKLVI 604
Query: 603 VCDTETVSSDGFLKRLIEY 621
+ + T+S F ++L+EY
Sbjct: 605 LGEAATLSHHSFYRKLMEY 623
>gi|189461769|ref|ZP_03010554.1| hypothetical protein BACCOP_02435 [Bacteroides coprocola DSM 17136]
gi|189431529|gb|EDV00514.1| putative DNA helicase [Bacteroides coprocola DSM 17136]
Length = 629
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 179/495 (36%), Positives = 281/495 (56%), Gaps = 28/495 (5%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN-SNLDHSQKD 203
+E +YR M +AL Q+ G +N A L + G Q + +F P L+ +Q++
Sbjct: 143 DETSYRLMFEALKQVI-GAKNNRLAELRDIFHGTQPASTF----SFHPLRFPWLNATQEE 197
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A++K L +K+V ++HGPPGTGKTTT+VE++ + + R +++L CA SN+AVD I E+LV
Sbjct: 198 AMNKVLHAKDVAIVHGPPGTGKTTTLVEVVYETLHRENQVLVCAQSNMAVDWISEKLVDR 257
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
V ++R+G+P+R+ ++L + + + IRK ++ L + K ++ R+
Sbjct: 258 GVSVLRIGNPSRVNDKMLSFTYERRFESHPDYPQLWSIRKAIRELYARSRKGAEREAVRQ 317
Query: 324 IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALE 383
L+ + E R + A V+ TL G+ +R L F + IDEAAQALE
Sbjct: 318 KINSLKDRATELEIRIN---ESLFSEARVIACTLVGSANRLLTGQKFGTLFIDEAAQALE 374
Query: 384 IACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQY 443
ACWI + K R ILAGDH QLPPTV++ EA + GLG TL + + D V S+L +QY
Sbjct: 375 AACWIPIRKADRVILAGDHCQLPPTVKAPEALRAGLGHTLMQTIVKNKPDTV-SLLKLQY 433
Query: 444 RMHEHIMNWSSKQLYNSKIKAHPSGVKRTS-STEPTLLLIDIAGCDM-EEKKDEEDSTMN 501
RM++ IM +SS+ Y +++ P R+ + + I+ G D EE E +N
Sbjct: 434 RMNDEIMRFSSEWFYGGMLQSAPEVKYRSILDFDTPIEWINTEGLDCNEEFIGENYGRIN 493
Query: 502 EGEAEVAMAHAK---------RLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK--- 549
+ EAE+++ K R + + D+G+I+PY AQV L+ L D K
Sbjct: 494 KSEAELSIEQLKGYITKIGRERFLNERI---DVGMISPYKAQVQYLRRLVRNDAFFKPYR 550
Query: 550 -NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTET 608
+ ++TVDGFQG+E++ I+IS+VR+N + ++GFL+D RRMNVA+TRAR + ++ D T
Sbjct: 551 QAITINTVDGFQGQERDVILISLVRANEEGQIGFLNDLRRMNVAITRARMKLIILGDAST 610
Query: 609 VSSDGFLKRLIEYFE 623
++ F K+L Y E
Sbjct: 611 LTRHAFYKKLYTYIE 625
>gi|423345058|ref|ZP_17322747.1| hypothetical protein HMPREF1060_00419 [Parabacteroides merdae
CL03T12C32]
gi|409222844|gb|EKN15781.1| hypothetical protein HMPREF1060_00419 [Parabacteroides merdae
CL03T12C32]
Length = 639
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 179/500 (35%), Positives = 284/500 (56%), Gaps = 22/500 (4%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +Y+ M +AL + + N A L VL G+ T + + F L+ SQ++A
Sbjct: 141 DETSYKTMFNALSTVIQAKGNR-LAYLRDVLLGK---TPVGRRTFFPMRFPWLNLSQEEA 196
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++ L++K+V ++HGPPGTGKTTT+VE I + + R ++++ CA SN AVD I E+LV
Sbjct: 197 VNHVLAAKDVSIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNTAVDWISEKLVDRG 256
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK--DKNTRR 322
+ ++R+G+P R+ ++L + + + + IRK ++ + L K +K T R
Sbjct: 257 IHVLRIGNPTRINDKMLSFTYERRFESHPDYAELWGIRKAIREIQSNLRKKSHGEKETAR 316
Query: 323 EIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQAL 382
LR + E + T++ A VV TL G+ +R L N +F + IDEAAQAL
Sbjct: 317 NRLSRLRFRATELEVKID---TELFDEARVVACTLVGSANRVLTNRNFTTLFIDEAAQAL 373
Query: 383 EIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQ 442
E ACWIA+ K R ILAGDH QLPPT++ +EA + GL TL +++ D E S+L Q
Sbjct: 374 EAACWIAIGKADRVILAGDHHQLPPTIKCIEAARGGLDHTLMQKITDR-KPETVSLLKTQ 432
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEKK-DEEDSTM 500
YRM+E IM + S+ Y+ ++++ P R + ++ +D A C EE + D+ S +
Sbjct: 433 YRMNEDIMRFPSRWFYHDELQSAPEVKHRGILEFDTPVVWLDTADCHFEEDRLDDSMSRI 492
Query: 501 NEGEAEVAMAHAKRLIQSGV------HASDIGIITPYAAQVVLLKILRSKDDKLKNME-- 552
N EA + ++ ++ I+ + D G+I+PY +QV ++ L +D K
Sbjct: 493 NRDEATLLVSTLQKYIEKIGKERVLDESIDFGLISPYKSQVQYIRGLIKRDTFFKPFRRL 552
Query: 553 --VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS 610
TVDGFQG+E++ I+IS+VR+N K +GFL D RRMNVA+TRAR + ++ D T++
Sbjct: 553 ITAHTVDGFQGQERDVIMISLVRANDKGRIGFLGDLRRMNVAITRARMKLMILGDAPTLT 612
Query: 611 SDGFLKRLIEYFEEHAEYLS 630
F K L EY E+ + ++
Sbjct: 613 RHAFYKELYEYIWENGQVIT 632
>gi|423723542|ref|ZP_17697691.1| hypothetical protein HMPREF1078_01678 [Parabacteroides merdae
CL09T00C40]
gi|409241252|gb|EKN34022.1| hypothetical protein HMPREF1078_01678 [Parabacteroides merdae
CL09T00C40]
Length = 639
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 179/500 (35%), Positives = 284/500 (56%), Gaps = 22/500 (4%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +Y+ M +AL + + N A L VL G+ T + + F L+ SQ++A
Sbjct: 141 DETSYKTMFNALSTVIQAKGNR-LAYLRDVLLGK---TPVGRRTFFPMRFPWLNLSQEEA 196
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++ L++K+V ++HGPPGTGKTTT+VE I + + R ++++ CA SN AVD I E+LV
Sbjct: 197 VNHVLAAKDVSIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNTAVDWISEKLVDRG 256
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK--DKNTRR 322
+ ++R+G+P R+ ++L + + + + IRK ++ + L K +K T R
Sbjct: 257 IHVLRIGNPTRINDKMLSFTYERRFESHPDYAELWGIRKAIREIQSNLRKKSHGEKETAR 316
Query: 323 EIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQAL 382
LR + E + T++ A VV TL G+ +R L N +F + IDEAAQAL
Sbjct: 317 NRLSRLRFRATELEVKID---TELFDEARVVACTLVGSANRVLTNRNFTTLFIDEAAQAL 373
Query: 383 EIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQ 442
E ACWIA+ K R ILAGDH QLPPT++ +EA + GL TL +++ D E S+L Q
Sbjct: 374 EAACWIAIGKADRVILAGDHHQLPPTIKCIEAARGGLDHTLMQKITDR-KPETVSLLKTQ 432
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEKK-DEEDSTM 500
YRM+E IM + S+ Y+ ++++ P R + ++ +D A C EE + D+ S +
Sbjct: 433 YRMNEDIMRFPSRWFYHDELQSAPEVKHRGILEFDTPVVWLDTADCHFEEDRLDDSMSRI 492
Query: 501 NEGEAEVAMAHAKRLIQSGV------HASDIGIITPYAAQVVLLKILRSKDDKLKNME-- 552
N EA + ++ ++ I+ + D G+I+PY +QV ++ L +D K
Sbjct: 493 NRDEATLLVSTLQKYIEKIGKERVLDESIDFGLISPYKSQVQYIRGLIKRDTFFKPFRRL 552
Query: 553 --VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS 610
TVDGFQG+E++ I+IS+VR+N K +GFL D RRMNVA+TRAR + ++ D T++
Sbjct: 553 ITAHTVDGFQGQERDVIMISLVRANDKGRIGFLGDLRRMNVAITRARMKLMILGDAPTLT 612
Query: 611 SDGFLKRLIEYFEEHAEYLS 630
F K L EY E+ + ++
Sbjct: 613 RHAFYKELYEYIWENGQVIT 632
>gi|154492784|ref|ZP_02032410.1| hypothetical protein PARMER_02423 [Parabacteroides merdae ATCC
43184]
gi|154087089|gb|EDN86134.1| putative DNA helicase [Parabacteroides merdae ATCC 43184]
Length = 640
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 179/500 (35%), Positives = 284/500 (56%), Gaps = 22/500 (4%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +Y+ M +AL + + N A L VL G+ T + + F L+ SQ++A
Sbjct: 142 DETSYKTMFNALSTVIQAKGNR-LAYLRDVLLGK---TPVGRRTFFPMRFPWLNLSQEEA 197
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++ L++K+V ++HGPPGTGKTTT+VE I + + R ++++ CA SN AVD I E+LV
Sbjct: 198 VNHVLAAKDVSIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNTAVDWISEKLVDRG 257
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK--DKNTRR 322
+ ++R+G+P R+ ++L + + + + IRK ++ + L K +K T R
Sbjct: 258 IHVLRIGNPTRINDKMLSFTYERRFESHPDYAELWGIRKAIREIQSNLRKKSHGEKETAR 317
Query: 323 EIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQAL 382
LR + E + T++ A VV TL G+ +R L N +F + IDEAAQAL
Sbjct: 318 NRLSRLRFRATELEVKID---TELFDEARVVACTLVGSANRVLTNRNFTTLFIDEAAQAL 374
Query: 383 EIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQ 442
E ACWIA+ K R ILAGDH QLPPT++ +EA + GL TL +++ D E S+L Q
Sbjct: 375 EAACWIAIGKADRVILAGDHHQLPPTIKCIEAARGGLDHTLMQKITDR-KPETVSLLKTQ 433
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEKK-DEEDSTM 500
YRM+E IM + S+ Y+ ++++ P R + ++ +D A C EE + D+ S +
Sbjct: 434 YRMNEDIMRFPSRWFYHDELQSAPEVKHRGILEFDTPVVWLDTADCHFEEDRLDDSMSRI 493
Query: 501 NEGEAEVAMAHAKRLIQSGV------HASDIGIITPYAAQVVLLKILRSKDDKLKNME-- 552
N EA + ++ ++ I+ + D G+I+PY +QV ++ L +D K
Sbjct: 494 NRDEATLLVSTLQKYIEKIGKERVLDESIDFGLISPYKSQVQYIRGLIKRDTFFKPFRRL 553
Query: 553 --VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS 610
TVDGFQG+E++ I+IS+VR+N K +GFL D RRMNVA+TRAR + ++ D T++
Sbjct: 554 ITAHTVDGFQGQERDVIMISLVRANDKGRIGFLGDLRRMNVAITRARMKLMILGDAPTLT 613
Query: 611 SDGFLKRLIEYFEEHAEYLS 630
F K L EY E+ + ++
Sbjct: 614 RHAFYKELYEYIWENGQVIT 633
>gi|448080065|ref|XP_004194533.1| Piso0_005032 [Millerozyma farinosa CBS 7064]
gi|359375955|emb|CCE86537.1| Piso0_005032 [Millerozyma farinosa CBS 7064]
Length = 738
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 232/706 (32%), Positives = 349/706 (49%), Gaps = 114/706 (16%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLE 75
++FVS L+D+E++A+ + + QK G NL +A+ GL G T+LE
Sbjct: 8 EQFVSGFKQLVDIEQKADALLTNEYLNKYSPKKLQKYGLAATNLVVKNARNGLGGNTVLE 67
Query: 76 F---QSTKGD--VLPAHKFGTHDVVVL--------------KPNKADLGSPALGQGVVYR 116
+ K D L + D+V + K ++ D + V+ +
Sbjct: 68 LCLDSAVKADDQELDSGDLKVGDIVRVEKMKSSQEQSSNQNKDSRQDDERNSYLDAVITK 127
Query: 117 LKDSSITVAF-DDIPEEGL---------NSPLRLEKLANEVTYRRMKDALIQLSKGVQNG 166
+ S I VA ++ EE + + L KL+N VTY+RM L +L +
Sbjct: 128 ITSSVINVAVSENNSEESIINLYNNTQNEQKVWLVKLSNSVTYKRMISTLNKLGEVDIAS 187
Query: 167 PAAGLIPVLFGEQKPTVLKKDIAFKP------FNSNLDHSQKDAISKALSSKNVFMLHGP 220
+I L G + T+ K D A K FN +L+ SQK+AI+ +L ++HGP
Sbjct: 188 IPNQVIQYLLGFR--TLHKADAATKKLKDKDFFNQSLNASQKEAINFSLFESPFSIIHGP 245
Query: 221 PGTGKTTTVVEIILQ-EVKRGSKILACAASNIAVDNIVERLVPH---------------- 263
PGTGKT T++EII Q +K+ ++L C SN++VD I+ERL
Sbjct: 246 PGTGKTYTLIEIIKQLSLKQNERVLVCGPSNVSVDTILERLASEFDSKSSIKEKKSKSQR 305
Query: 264 ------RVRLVRLGHPARLLPQVLESALDA-----QVLRGDNSSLASDIRKEMKALNGKL 312
+L+R+GHPARLL L+ +L+ D+ ++ DI ++ K+
Sbjct: 306 KTGSRDPSQLIRIGHPARLLDSCLKHSLEVLSKSDSGSGSDSRAILKDIENDINETLRKV 365
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKL------- 365
K ++ RR + +L+ KE RKR+ V++++ A V+L TL G+ L
Sbjct: 366 KKCRNYGERRALWNDLKGYRKELRKRESKLVSELVVGAKVILATLHGSGGYDLTSIYKNP 425
Query: 366 ------DNTSFDLVIIDEAAQALEIACWIALLKG---SRCILAGDHLQLPPTVQSVEAEK 416
D FD +IIDE +Q+LE CWI L+ R I+AGD+LQLPPTV+S + +
Sbjct: 426 EFATIKDGNLFDTIIIDEVSQSLEPQCWIPLISHMGFKRLIIAGDNLQLPPTVKSSKLDS 485
Query: 417 -------------KGLGRTLFERLA-DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKI 462
+ L TLF+R+ + GD +L QYRM++ IM + S++LY K+
Sbjct: 486 PAAQGVAVSSPAHRSLEVTLFDRIVRECNGDAYKKLLDTQYRMNDAIMAFPSRELYEGKL 545
Query: 463 KAHPS----------GVKRTSSTEPTLLLIDIAGCDMEEKKDEED--------STMNEGE 504
KA S V+ T T + D G D E+ DE + S NE E
Sbjct: 546 KADSSVKNILLRDMPNVQPTDETSAPCIWYDTQGGDYPEQMDESENPLTDSMGSKYNEME 605
Query: 505 AEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREK 564
H LI +GV DIG+I+PYAAQV L+ + +L+ +E +T+D FQGREK
Sbjct: 606 LLAVKKHIDLLIAAGVAPRDIGVISPYAAQVARLRKALAAA-ELEAVEAATIDAFQGREK 664
Query: 565 EAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS 610
EAIIIS+VRSN + VGFLS++RR+NVA+TR +R C+V D + +S
Sbjct: 665 EAIIISLVRSNDDRAVGFLSEKRRLNVAMTRPKRHLCVVGDMDLMS 710
>gi|294778267|ref|ZP_06743693.1| putative DNA helicase [Bacteroides vulgatus PC510]
gi|294447895|gb|EFG16469.1| putative DNA helicase [Bacteroides vulgatus PC510]
Length = 630
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 179/492 (36%), Positives = 284/492 (57%), Gaps = 26/492 (5%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL Q+ K N A L + G Q+ P+ L+++Q++A
Sbjct: 144 DETSYRLMFEALRQVLKAKGNR-LAELREIFHGNQQAETFSFGFTRFPW---LNNTQEEA 199
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K + +K+V ++HGPPGTGKTTT+VE I + + R ++++ CA SN+AVD I E+LV
Sbjct: 200 VNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNMAVDWISEKLVDRG 259
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L + + + IRK ++ L G+ K ++ R+
Sbjct: 260 VPVLRIGNPTRVNDKMLAFTYERRFESHPDYPQLWSIRKAIRELYGRSRKGAERENIRQK 319
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
L+ + E R A+ A V+ TL + +R L F + IDEAAQALE
Sbjct: 320 INSLKDRATELEIRINEAL---FGEARVIACTLVSSANRILTGRKFSTLFIDEAAQALEP 376
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R ILAGD+ QLPPT++ +EA + GL RTL + +AD D V S+L VQYR
Sbjct: 377 ACWIAIRKADRVILAGDYCQLPPTIKCMEAARGGLDRTLMQEIADNKPDTV-SLLKVQYR 435
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLL-LIDIAGCDM-EEKKDEEDSTMNE 502
M++ IM +SS+ Y ++K+ P R+ T + I+ G + EE E +N+
Sbjct: 436 MNDEIMRFSSEWFYQGELKSAPEVKYRSILDYDTPIEWINTEGMECNEEFVGESFGRINK 495
Query: 503 GEAEVAMAH---------AKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN--- 550
EA ++++ R ++ + D+G+I+PY AQV L+ L +D K
Sbjct: 496 EEAALSISQLTNYINKIGKDRFLEERI---DVGLISPYKAQVQYLRQLIKRDAFFKPYRH 552
Query: 551 -MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
+ ++TVDGFQG+E++ I+IS+VR+N + ++GFL+D RRMNVA+TRAR + ++ D T+
Sbjct: 553 LITINTVDGFQGQERDVILISLVRANEEGQIGFLNDLRRMNVAITRARMKLIILGDASTL 612
Query: 610 SSDGFLKRLIEY 621
+ F K+L EY
Sbjct: 613 TKHPFYKKLYEY 624
>gi|282859892|ref|ZP_06268980.1| putative DNA helicase [Prevotella bivia JCVIHMP010]
gi|424899896|ref|ZP_18323438.1| hypothetical protein PrebiDRAFT_0585 [Prevotella bivia DSM 20514]
gi|282587295|gb|EFB92512.1| putative DNA helicase [Prevotella bivia JCVIHMP010]
gi|388592096|gb|EIM32335.1| hypothetical protein PrebiDRAFT_0585 [Prevotella bivia DSM 20514]
Length = 637
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 289/504 (57%), Gaps = 41/504 (8%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL ++ K N A L + + QK + P+ L+ +Q+ A
Sbjct: 146 DETSYRMMFEALDRVIKAKGN-RLAYLRDLFYSHQKAERFSFNALKLPW---LNPTQEKA 201
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
+++ L +K+V ++HGPPGTGKTTT+VE I + + R +++L CA SN+A+D I E+LV
Sbjct: 202 VNEVLWAKDVAVVHGPPGTGKTTTLVEAINETLMRENQVLVCAQSNMAIDWISEKLVDRG 261
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
+ ++R+G+P R+ ++L + + + +RK ++ L N +R +
Sbjct: 262 INVLRIGNPTRVNDKMLGFTYERRFEAHSDYPQLWSLRKAIRQLRS--------NRKRGL 313
Query: 325 QKELRTLSKEERKRQQLAV---TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQA 381
++ L + + + +L + +++ A VV TL A SR ++ FD + IDEAAQA
Sbjct: 314 ERFHEKLDRLKSRATELEIRINSELFSEARVVACTLVSANSRIMEGQKFDTLFIDEAAQA 373
Query: 382 LEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTV 441
LE ACWI + + SR + AGDH QLPPT++++ A + GLG+TL ER+ + EV ++L V
Sbjct: 374 LEAACWIPIRRASRVVFAGDHCQLPPTIKNIAAMRAGLGKTLMERIVE-NKPEVVTLLKV 432
Query: 442 QYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS-STEPTLLLIDIAGCDM--------EEK 492
QYRM+E IM +SS Y+ ++++ P R+ + +L +D + D+ EE
Sbjct: 433 QYRMNEEIMRFSSDWFYHGEVESAPQIRYRSILDYDHPMLWLDTSKVDIGDDEVSFKEEF 492
Query: 493 KDEEDSTMNEGEAEVAMAH---------AKRLIQSGVHASDIGIITPYAAQVVLLKILRS 543
E +N+GEAE+ + +R++ + D+G+I+PY AQV L+ L
Sbjct: 493 VGESFGRINKGEAELTLNSLQEYFTKIGKQRILDESI---DVGVISPYRAQVQYLRKLIR 549
Query: 544 KDDKLKN----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 599
K K + V+TVDGFQG+E++ I+ISMVR+N + ++GFL D RRMNVA+TRAR +
Sbjct: 550 KRKFFKPYRHLITVNTVDGFQGQERDVILISMVRANDEGQIGFLKDLRRMNVAITRARMK 609
Query: 600 CCLVCDTETVSSDGFLKRLIEYFE 623
++ + ET++ F +L EY E
Sbjct: 610 LIILGNAETMTKHPFYAKLYEYIE 633
>gi|224026767|ref|ZP_03645133.1| hypothetical protein BACCOPRO_03524 [Bacteroides coprophilus DSM
18228]
gi|224020003|gb|EEF78001.1| hypothetical protein BACCOPRO_03524 [Bacteroides coprophilus DSM
18228]
Length = 607
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 179/498 (35%), Positives = 282/498 (56%), Gaps = 34/498 (6%)
Query: 145 NEVTYRRMKDALIQLSKGV---QNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN-SNLDHS 200
+E +YR M +AL KGV +N A L + G Q + +F+P L+ +
Sbjct: 121 DETSYRLMFEAL----KGVISARNNRLAELRDIFHGRQPVS----SFSFQPVRFPWLNRT 172
Query: 201 QKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERL 260
Q++A++K L +K+V ++HGPPGTGKTTT+VE + + + R +++L CA SN+AVD I E+L
Sbjct: 173 QEEAVNKVLHAKDVAIVHGPPGTGKTTTLVEAVYETLHRENQVLVCAQSNMAVDWISEKL 232
Query: 261 VPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNT 320
V V ++R+G+P+R+ ++L + + + IRK ++ L ++ K D+ +
Sbjct: 233 VDRGVSVLRIGNPSRVNDKMLSFTYERRFESHPDYPQLWSIRKAVRELYARMRKASDRES 292
Query: 321 RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQ 380
R+ L+ + E R + A V+ TL + +R L+ F + IDEAAQ
Sbjct: 293 IRQKINSLKDRATELEIRIN---ASLFAEARVIACTLVSSANRLLEGQKFGTLFIDEAAQ 349
Query: 381 ALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLT 440
ALE ACWI + K R ILAGDH QLPPTV+ +A + GLG TL + + E ++L
Sbjct: 350 ALEAACWIPIRKVDRVILAGDHCQLPPTVKCPQALRAGLGETLMQTIVK-NKPETVALLK 408
Query: 441 VQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS-STEPTLLLIDIAGCDM-EEKKDEEDS 498
+QYRM+E IM +SS Y +++ P R+ + + ID D EE E
Sbjct: 409 LQYRMNEEIMRFSSDWFYGGMVQSAPEVKYRSILDFDTPIEWIDTEDMDCNEEFVGENYG 468
Query: 499 TMNEGEAEVAMAHAK---------RLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK 549
+N+ EAE++++ K R ++ + D+G+I+PY AQV L+ L +D K
Sbjct: 469 RINKAEAELSVSQLKTYITKIGRERFLEERI---DVGLISPYKAQVQYLRQLLKRDPFFK 525
Query: 550 N----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCD 605
+ V+TVDGFQG+E++ I+IS+VR+N ++GFLSD RRMNVA+TRAR + ++ D
Sbjct: 526 PYRSLITVNTVDGFQGQERDVILISLVRANEDGQIGFLSDLRRMNVAITRARMKLIILGD 585
Query: 606 TETVSSDGFLKRLIEYFE 623
T++ F ++L EY +
Sbjct: 586 VSTLTRHAFYRKLYEYIQ 603
>gi|357044126|ref|ZP_09105810.1| hypothetical protein HMPREF9138_02282 [Prevotella histicola F0411]
gi|355367676|gb|EHG15104.1| hypothetical protein HMPREF9138_02282 [Prevotella histicola F0411]
Length = 632
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 181/495 (36%), Positives = 286/495 (57%), Gaps = 36/495 (7%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN-SNLDHSQKD 203
+E +YR M DAL + K N A L + + QK + +F P L+ +Q+
Sbjct: 143 DETSYRMMFDALDRTMKARGNR-LAYLRDLFYSRQKV----EKFSFAPIRLPWLNPTQEK 197
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A+++ L +K+V ++HGPPGTGKTTT+VE I + + R S+++ CA SN+AVD I E+LV
Sbjct: 198 AVNEVLWAKDVAVVHGPPGTGKTTTLVEAINEALMRESQVMVCAQSNMAVDWICEKLVDR 257
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
+ ++R+G+P R+ ++L + + + IRK ++ L N +R
Sbjct: 258 GINVLRIGNPTRVNDKMLGFTYERKFEAHPDYPQLWSIRKAIRELRN--------NRKRG 309
Query: 324 IQKELRTLSKEERKRQQLAV---TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQ 380
+ + + + + + +L + T++ A VV +TL GA SR ++ F + IDEAAQ
Sbjct: 310 SESYHQKMDRLKSRATELEIRINTELFDEARVVASTLVGANSRVMEGQKFTTLFIDEAAQ 369
Query: 381 ALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLT 440
ALE ACWIA+ + SR I AGDH QLPPTV+S+ A + GLG+TL ER+ + EV ++L
Sbjct: 370 ALEAACWIAIRRASRVIFAGDHCQLPPTVKSIAALRGGLGKTLMERIVE-NKPEVVTLLK 428
Query: 441 VQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAG-CDMEEKKDEEDS 498
VQYRM+E IM +SS Y+ +I + P R + ++ ID + E+ E
Sbjct: 429 VQYRMNEEIMRFSSDWFYHGQIVSAPQIKYRGILDYDNPMVWIDTSDELSKEQFVGESFG 488
Query: 499 TMNEGEAEVAMAH---------AKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK 549
+N+GEAE+ + +R++ + D+G+I+PY AQV L+ L K + K
Sbjct: 489 RINKGEAELTLKTLQEYFMKIGKQRILDERI---DVGVISPYRAQVQYLRSLIKKREFFK 545
Query: 550 N----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCD 605
+ V+TVDGFQG+E++ I+IS+VRSN + ++GFL+D RRMNVA+TRAR + ++ +
Sbjct: 546 PYRSLISVNTVDGFQGQERDVILISLVRSNEEGQIGFLNDLRRMNVAITRARMKLIILGN 605
Query: 606 TETVSSDGFLKRLIE 620
T++ F K+L E
Sbjct: 606 VATLTRHPFYKKLWE 620
>gi|255036839|ref|YP_003087460.1| type III restriction protein res subunit [Dyadobacter fermentans
DSM 18053]
gi|254949595|gb|ACT94295.1| type III restriction protein res subunit [Dyadobacter fermentans
DSM 18053]
Length = 636
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 202/576 (35%), Positives = 307/576 (53%), Gaps = 44/576 (7%)
Query: 84 LPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKL 143
+PA F H+ P K + QG RLK IT+ D++PE + L ++ L
Sbjct: 77 MPAVLFSNHE-----PKKDRVEGVVSHQGG-NRLK---ITLRTDELPEWSRDGKLGIDLL 127
Query: 144 ANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN-SNLDHSQK 202
++ +Y M+ AL + LI VL GE+ P+ KDI P L+ SQ+
Sbjct: 128 FDDNSYDEMQSALKTADSLGSSDKEGHLIKVLTGEKAPS-FDKDIY--PITLPKLNPSQQ 184
Query: 203 DAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSK-ILACAASNIAVDNIVERLV 261
A+ LS++ + ++HGPPGTGKTTT+V+ I VK+ ++ IL A SN AVD + E+L
Sbjct: 185 RAVQNILSAQELAIVHGPPGTGKTTTLVQAIKALVKKDNRPILVVAPSNTAVDLLSEKLS 244
Query: 262 PHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLAS--DIR---------KEMKALNG 310
+ ++R+G+P R+ ++ LD+++ SS AS DI+ K M
Sbjct: 245 EEGLNVLRVGNPVRVSERLTALTLDSKM-----SSHASVKDIKTLKKQANEYKNMAHKYK 299
Query: 311 KLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
+ +++ R+ + E + K+ +Q + D++ VV TL G+ + N +
Sbjct: 300 RHFGKAERDQRKALFDEAHRIMKDVANMEQYIIDDLLTKTQVVTATLVGSNHFTVRNMKY 359
Query: 371 DLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDEA QALE ACWI +LK + + AGDHLQLPPT++S EA K GL TL E+ L
Sbjct: 360 RTVVIDEAGQALEPACWIPILKAEKVVFAGDHLQLPPTIKSEEAAKGGLSTTLLEKCVAL 419
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT-SSTEPTLLLIDIAGCDM 489
+ + V +L QYRM+E IM +SSK Y+ K+KAH S R E L +D AGC
Sbjct: 420 HPESVV-LLEEQYRMNEAIMGYSSKVFYHDKLKAHESVAGRVLFPGEAPLAFVDTAGCGF 478
Query: 490 EEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHAS-------DIGIITPYAAQVVLLKILR 542
++K + ST N EA H +L + I II+PY Q+ +LK L
Sbjct: 479 DDKLEGTSST-NPEEAAFLFKHLTQLAAEFAKVNPKPESFPSIAIISPYKEQINILKNLL 537
Query: 543 SKDDKLK----NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARR 598
+ L+ + V+T+D FQG+E++ + ISM R+N + ++GFL+D RRMNVA+TRAR+
Sbjct: 538 AHAPHLQLYLDKIAVNTIDSFQGQERDVVYISMTRNNIEGQIGFLADIRRMNVAMTRARK 597
Query: 599 QCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
+ ++ D+ T+S F + I Y + Y S E+
Sbjct: 598 KLVVIGDSATLSVLPFYENFIAYAQGLNAYQSAWEF 633
>gi|398332764|ref|ZP_10517469.1| DNA and RNA helicase subunit [Leptospira alexanderi serovar Manhao
3 str. L 60]
Length = 637
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 199/646 (30%), Positives = 341/646 (52%), Gaps = 31/646 (4%)
Query: 7 KEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQT 66
KE++ + S++E V A L + EK+ E S SR+L + G T+ L +
Sbjct: 2 KERKFSGSIEELEFVRAEL-EREKKEEDSLFSKDWLSRSLQDRVRLGVTLYPLVYEEQSV 60
Query: 67 GLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF 126
G G +L F+ + P+ KF + V + N+ + + ++ L I +A
Sbjct: 61 GREGSWILTFRFPNQEEYPS-KFQSGAPVQIGKNEDRV------RAILVSLHKERIRIAI 113
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK- 185
D++PE + L+ L +E +Y+ M AL +S + +L G +KP ++
Sbjct: 114 DEVPEWTEDGKCFLDLLPDETSYKEMFHALQAVSDATKGTRLYVNRELLLGYEKPDLISI 173
Query: 186 ----KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS 241
+ N +L+ SQK+A+ ++ S++V ++HGPPGTGKTTT+ EI+ Q V
Sbjct: 174 READRSRILGRMNPSLNESQKNAVLHSVLSEDVTIIHGPPGTGKTTTLTEIVSQLVADEK 233
Query: 242 KILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDI 301
++L A ++ A D +VE + + ++RLGHPAR+ L + LD ++ + L S+
Sbjct: 234 RVLVSAPTHSACDLLVESIFAKGISVLRLGHPARISDAALHTTLDYKLFHHPDGKLLSEY 293
Query: 302 RKEMKALNGKLLKT------KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLT 355
R+++ ++ + K K++ R+ + +E++ L K R ++ + ++ + V+++
Sbjct: 294 RRDVIEISKQAKKYKRNFGEKEREERKNLFQEVKELKKTIRSMERGLIDSLVSSHPVIVS 353
Query: 356 TLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAE 415
T + L+ +FD ++DE++Q LE A WI +LK R ILAGDH QLPP++ S E
Sbjct: 354 TPVASARSVLEGRTFDFCVLDESSQGLEPAFWIPILKSDRVILAGDHKQLPPSLFS---E 410
Query: 416 KKGLGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS 474
K L TLFE+ A+ L +L QYRM + I ++ S + Y++++K+ G +R S+
Sbjct: 411 KNSLEFTLFEKAAERLEMSGRVFLLDTQYRMKDEISSFPSMEFYSNRLKSGRPGPERISN 470
Query: 475 TEPT------LLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
T L ID AG D EE +DS +N EA++ + L ++ +I I+
Sbjct: 471 FPETFPFGNALQWIDTAGTDSEEVI-VDDSLINSFEADLQVHLCTLLQENNWPEEEITIL 529
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
+PY AQV L+ + + ++ ++VST+D FQGRE I+ VRSNS+ GFL + RR
Sbjct: 530 SPYRAQVRLI-LEKLQEAGFSKIQVSTIDSFQGRENRCILFGFVRSNSEGRSGFLKESRR 588
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
+NV +TRA+ + D+ T+ D FL RLI + E+ + + E+
Sbjct: 589 INVGMTRAKDLLLCIGDSSTLLEDPFLSRLIRFVEDKGVFRTAWEF 634
>gi|456865626|gb|EMF83960.1| AAA domain protein [Leptospira weilii serovar Topaz str. LT2116]
Length = 637
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 204/647 (31%), Positives = 343/647 (53%), Gaps = 33/647 (5%)
Query: 7 KEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQT 66
KE++ + S++E V A L + EK+ E S SR+L K G T+ L +
Sbjct: 2 KERKFSGSIEELEFVRAEL-EREKKEEDSLFSKDWLSRSLQDRVKLGITLYPLVYEEQSF 60
Query: 67 GLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF 126
G G +L F+ + P+ KF + V + N+ + + ++ L I +A
Sbjct: 61 GREGSWILTFRFPNQEEYPS-KFQSGAPVQIGKNEDRV------RAILVSLHKERIRIAI 113
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLS---KGVQNGPAAGLIPVLFGEQKPTV 183
D++PE + L+ L +E +Y+ M AL +S KG + L+ + +G+ P +
Sbjct: 114 DEVPEWTEDGKCFLDLLPDETSYKEMFRALDAVSGATKGTRLYVNRELL-LGYGKPDPII 172
Query: 184 LK---KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG 240
++ + SNL+ SQ+ A A+ S++V ++HGPPGTGKTTT+ EI+ Q V G
Sbjct: 173 IRDGDRSRILGRMTSNLNESQRKAALNAVLSEDVTIIHGPPGTGKTTTLTEIVSQLVAEG 232
Query: 241 SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
++L A ++ A D +VE + + ++RLGHPAR+ L + LD ++ + L S+
Sbjct: 233 KRVLVSAPTHSACDLLVESISTRGISVLRLGHPARISDAALHTTLDYKLFYHPDGKLLSE 292
Query: 301 IRKEMKALNGKLLKT------KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVL 354
R+++ ++ + K K++ R+ + +E++ L K R ++ + ++ + VV+
Sbjct: 293 YRRDVIEISKQAKKYKRNFGEKEREERKNLFQEVKELKKTIRSMEKGLIDSLVSSHPVVV 352
Query: 355 TTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA 414
+T + L+ FD ++DE++Q LE A WI +LK R ILAGDH QLPP++ S
Sbjct: 353 STPVASARSVLEGRQFDFCVLDESSQGLEPAFWIPILKSDRVILAGDHKQLPPSLFS--- 409
Query: 415 EKKGLGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS 473
EK L TLFE+ A+ L +L +QYRM + I + S + Y++++K+ G +R S
Sbjct: 410 EKNSLEFTLFEKAAERLETSGRVFLLDIQYRMKDEISFFPSMEFYSNRLKSGRPGPERIS 469
Query: 474 STEPT------LLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGI 527
+ T L ID AG D EE +DS N EA++ + L+++ +I +
Sbjct: 470 NFPETFPFGNALQWIDTAGTDSEEVA-VDDSLTNPFEADLQVCLCTLLLENNWSEEEITV 528
Query: 528 ITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
++PY AQV L+ + ++ L + VST+D FQGRE I++ VRSNS+ GFL + R
Sbjct: 529 LSPYRAQVRLIS-EKLREAGLTKIGVSTIDSFQGRENRCILLGFVRSNSEGRSGFLKESR 587
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
R+NV +TRA+ + D+ T+ D FL RLI + E+ + + E+
Sbjct: 588 RINVGMTRAKDLLICIGDSSTLLEDPFLSRLIRFVEDKEIFRTAWEF 634
>gi|47224512|emb|CAG08762.1| unnamed protein product [Tetraodon nigroviridis]
Length = 738
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 173/439 (39%), Positives = 242/439 (55%), Gaps = 87/439 (19%)
Query: 242 KILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDI 301
++L CA SN+AVDN+VERL +V+++RLGHPARLL + + +LDA + N+ + DI
Sbjct: 7 QVLCCAPSNVAVDNLVERLAQSKVKVLRLGHPARLLESIQKHSLDAIIAHSSNADIIDDI 66
Query: 302 RKEM-KALNGKLLKT-KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
R+++ KA+ G +KT + K R +++EL L KE + R+ A+T ++K+ADVVL+T TG
Sbjct: 67 RRDIDKAVMG--MKTMQKKGERVGLRRELTELRKELKTRETTAMTQILKSADVVLSTNTG 124
Query: 360 AVS----RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAE 415
A + L FD V+IDE AQALE +CWIALL+ +C+LAGD+ QLPPT++S +A
Sbjct: 125 ACDDGPLKFLPAEHFDWVVIDECAQALESSCWIALLRARKCVLAGDYKQLPPTIKSQKAA 184
Query: 416 KKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS-------- 467
KGL +L ERL +YGD V MLTVQYRM+ IM W+S Q+Y K+ AH S
Sbjct: 185 SKGLSVSLMERLIQMYGDSVVRMLTVQYRMNSAIMEWASDQMYQGKLTAHGSVESHVLKW 244
Query: 468 ----------------------------GVKRTSSTEPTLLLIDIAGCDMEEKK-DEEDS 498
GV T LLLID AGC + E + +E S
Sbjct: 245 VGAWRVLFKHPLKRFYNKFVSSTQRDLPGVTCVEETSTPLLLIDTAGCGLNEMEVADEQS 304
Query: 499 TMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDG 558
N+GE ++ H K L ++G+ A DI +I PY Q
Sbjct: 305 KGNQGEVDIVELHIKALTEAGLKAKDIAVIAPYNLQA----------------------- 341
Query: 559 FQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRL 618
+EVGFL++ RR+NVAVTRARR +VCDT TV + FLK L
Sbjct: 342 -------------------REVGFLAEDRRINVAVTRARRHIAIVCDTRTVQNHAFLKSL 382
Query: 619 IEYFEEHAEYLSGSEYLNE 637
I++ +H E + EY+++
Sbjct: 383 IDHVTQHGEVRTAFEYIHD 401
>gi|255086899|ref|XP_002509416.1| predicted protein [Micromonas sp. RCC299]
gi|226524694|gb|ACO70674.1| predicted protein [Micromonas sp. RCC299]
Length = 592
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 186/508 (36%), Positives = 265/508 (52%), Gaps = 65/508 (12%)
Query: 192 PFNSNLDHSQKDAISKALS-SKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASN 250
P + D +Q+ A+ AL+ + V + GPPGTGKT V+EII + V G ++LACA SN
Sbjct: 77 PIPVDFDPAQQLAVRVALTKTAPVVWIQGPPGTGKTGVVIEIIRRAVASGQRVLACAPSN 136
Query: 251 IAVDNIVERLVP----------HRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSL-AS 299
AVDN+VERL + + VR+G P R+ LES+LDA++ R AS
Sbjct: 137 AAVDNLVERLAKLNTANEQNAGNNIDFVRIGAPERISSAALESSLDARIDRETGVFFDAS 196
Query: 300 DIRKEMKAL-------------NGKLLKTKDKNTRREIQ-------KELRTLSKEERKRQ 339
RK+ L GK+ D + + I+ +E RTL+K +K +
Sbjct: 197 RGRKKEIDLAKRQGWKKQEDLQKGKVKGLGDNISAKNIEAKLGDLRREQRTLAKSGKKVR 256
Query: 340 QLAVTDVIKNADVVLTTLTGAVSRKLDN-TSFDLVIIDEAAQALEIACWIALLKGSRCIL 398
A +++ A VVL T GA + + +FD+VI+DEAAQA E A WI L++ R +L
Sbjct: 257 ANAEREILAEAQVVLATAVGAGAENIQRLPAFDIVILDEAAQATEPAAWIPLVRSKRAVL 316
Query: 399 AGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDE--------VTSMLTVQYRMHEHIM 450
GD QL P V+S +A GL L R A G + +LT QYR + I
Sbjct: 317 VGDPCQLAPLVRSTKASDGGLATPLMARKAPALGAANAYLSSGVLGCVLTTQYRSNRLIS 376
Query: 451 NWSSKQLYNSKIKA----------HPSGVKRTSSTEPTLLLID--------IAGCDMEEK 492
+W+S+++Y ++ A GV T +T LLL+D + GC +
Sbjct: 377 DWASQEMYGGRLAASERVASRLLSQMPGVASTPATNAPLLLLDTRTRAGMLLTGCSEVSE 436
Query: 493 KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKI------LRSKDD 546
S +NEGEA M H L+ +GV SD+ + +PYAAQV L++ R
Sbjct: 437 MSSSSSLVNEGEAYAVMMHVAGLLGAGVAPSDVAVQSPYAAQVRLIRTKLADVAARGAAP 496
Query: 547 KLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 606
+EV++VD FQGRE EA++IS VRSN ++ VGFL+D RR NVAVTRARR C+V D+
Sbjct: 497 GADLVEVASVDSFQGREAEAVVISTVRSNDRQSVGFLADVRRANVAVTRARRHVCIVGDS 556
Query: 607 ETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
TV D FL RL+ + + + +E+
Sbjct: 557 VTVGGDPFLNRLMSHMRTNGLVATANEF 584
>gi|189463893|ref|ZP_03012678.1| hypothetical protein BACINT_00227 [Bacteroides intestinalis DSM
17393]
gi|189438466|gb|EDV07451.1| putative DNA helicase [Bacteroides intestinalis DSM 17393]
Length = 629
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 180/498 (36%), Positives = 277/498 (55%), Gaps = 31/498 (6%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + + N A L ++ G KP + P+ L+ +Q++A
Sbjct: 141 DETSYRTMFEALSDVIRAKGN-RLAELRDIMLGTLKPGFRELYPVRFPW---LNSTQENA 196
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L S++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 197 VNKVLYSRDVSIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWISEKLVDRG 256
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L + + S IRK ++ + GK + + E
Sbjct: 257 VNVLRIGNPTRVNDKMLSFTYERRFEGHPAYSELWSIRKAIREMGGK-----HRGSYEER 311
Query: 325 QKELRTLSKEERKRQQLAV---TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQA 381
+ +S+ + QL + D+ NA V+ +TL + R L+ F + IDEAAQA
Sbjct: 312 ESARNRMSRLRDRATQLEIQINADLFDNAHVITSTLVSSNHRILNGHRFGTLFIDEAAQA 371
Query: 382 LEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTV 441
LE ACWIA+ K R +LAGDH QLPPT++ EA + GL TL ER+ V S+L V
Sbjct: 372 LEAACWIAIRKADRVVLAGDHCQLPPTIKCYEAARGGLESTLMERVVANKPSTV-SLLKV 430
Query: 442 QYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK-------- 492
QYRMHE IM + S+ YN +++A P R + + ID + D +E+
Sbjct: 431 QYRMHEEIMKFPSQWFYNGELEAAPEIRYRGILDWDTPISWIDTSEMDFKEEFVGETFGR 490
Query: 493 --KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN 550
K E D + E + + KR+++ + D GII+PY AQV L+ LK
Sbjct: 491 INKAEADLLLQELKVYINRIGGKRVLEERI---DFGIISPYKAQVQYLRNKIKASGSLKP 547
Query: 551 ----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 606
+ V+TVDGFQG+E++ I IS+VR+N + ++GFL+D RRMNVA+TRAR + ++ +
Sbjct: 548 YRSLLTVNTVDGFQGQERDVIFISLVRANEEGQIGFLNDLRRMNVAITRARMKLVILGEV 607
Query: 607 ETVSSDGFLKRLIEYFEE 624
T+ F +LIE+ ++
Sbjct: 608 NTLKHHKFYHKLIEHIQQ 625
>gi|359726451|ref|ZP_09265147.1| DNA and RNA helicase subunit [Leptospira weilii str. 2006001855]
Length = 637
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 206/647 (31%), Positives = 341/647 (52%), Gaps = 33/647 (5%)
Query: 7 KEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQT 66
KE++ + S++E V A L + EK+ E S SR++ K G T+ L +
Sbjct: 2 KERKFSGSIEELEFVRAEL-EREKKEEDSLFSKDWLSRSIQDRVKLGITLYPLVYEEQSF 60
Query: 67 GLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF 126
G G +L F+ + P+ KF + V + N+ + + ++ L I +A
Sbjct: 61 GREGSWILTFRFPNQEEYPS-KFQSGAPVQIGKNEDRV------RAILVSLHKERIRIAI 113
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMK---DALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
D++PE + L+ L +E +Y+ M DA+I +KG + L+ + +G+ P +
Sbjct: 114 DEVPEWTEDGKCFLDLLPDETSYKEMFHALDAVIGATKGTRLYVNRELL-LGYGKPDPII 172
Query: 184 LK---KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG 240
++ + NL+ SQ+ A KA+ S++V ++HGPPGTGKTTT+ EII Q V G
Sbjct: 173 IRDGDRSRILGRMTGNLNESQRKAAIKAVLSEDVTIIHGPPGTGKTTTLTEIISQLVAEG 232
Query: 241 SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
+IL A ++ A D +VE + + ++RLGHPAR+ L + LD ++ + L S+
Sbjct: 233 KRILVSAPTHSACDLLVESVSTRGIPVLRLGHPARISDAALHATLDYKLFHHPDGKLLSE 292
Query: 301 IRKEMKALNGKLLKT------KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVL 354
R+++ ++ + K K+K R+ + +E++ L K R ++ + ++ VV+
Sbjct: 293 YRRDVIEISKQAKKYKRNFGEKEKEERKNLFQEVKELKKTIRSMEKGLIDSLVSFHPVVV 352
Query: 355 TTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA 414
+T + L+ FD ++DE++Q LE A WI +LK R ILAGDH QLPP++ S
Sbjct: 353 STPVASARSVLEGRQFDFCVLDESSQGLEPAFWIPILKSDRVILAGDHKQLPPSLFS--- 409
Query: 415 EKKGLGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS 473
EK L TLFE+ A+ L +L QYRM + I + S + Y++++K+ G +R S
Sbjct: 410 EKNSLEFTLFEKAAERLETSGRVFLLDTQYRMKDEISFFPSMEFYSNRLKSGRPGPERIS 469
Query: 474 STEPT------LLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGI 527
+ T L ID AG D EE +DS N EA++ + L ++ +I +
Sbjct: 470 NFPETFPFGNALQWIDTAGTDSEEVA-VDDSLTNPFEADLQVRLCTLLRENNWSEEEITV 528
Query: 528 ITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
++PY AQV L+ + ++ L + VST+D FQGRE I++ VRSNS+ GFL + R
Sbjct: 529 LSPYRAQVRLIS-EKLREAGLTKIGVSTIDSFQGRENRCILLGFVRSNSEGRSGFLKESR 587
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
R+NV +TRA+ + D+ T+ D FL RLI + E+ + + E+
Sbjct: 588 RINVGMTRAKDLLLCIGDSSTLLEDPFLSRLIRFVEDKEIFRTAWEF 634
>gi|150020793|ref|YP_001306147.1| putative DNA helicase [Thermosipho melanesiensis BI429]
gi|149793314|gb|ABR30762.1| putative DNA helicase [Thermosipho melanesiensis BI429]
Length = 643
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 223/668 (33%), Positives = 354/668 (52%), Gaps = 97/668 (14%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQK--KGSTILNL--KCVDAQTGLMG 70
++E++ + L+ LE++ EI +NL Q+ KG IL+L K + + G+
Sbjct: 1 MEEYIKKLIQLVKLERDEEIKR--MQWEMKNLTGKQRENKGRAILDLSPKIIGEELGMY- 57
Query: 71 KTLLEFQSTKGDVLPAHKFGTHDVVVL---KPNKADLGSPALGQGVVYRLKDSSITVAFD 127
L++F K + GT D V++ P K+D+ +GVV I V+
Sbjct: 58 --LVKFGRKKQ---IETEIGTGDEVIISKGNPTKSDI------KGVVTERGKRFIVVSLS 106
Query: 128 DI-PEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
++ P++ N +R++ A+++TY+R D L +N ++ + + P V+
Sbjct: 107 NLLPKDFKN--VRIDLYASDITYKRQIDNL-------ENNDVKKILKYILSD--PKVVDN 155
Query: 187 DIA-FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILA 245
F P ++NL+ QK AISKAL S++ ++HGP GTGKT T+ E ILQE K+G KIL
Sbjct: 156 GTEEFTPIDNNLNEYQKLAISKALKSEDFSLIHGPFGTGKTRTLAEYILQEAKKGKKILV 215
Query: 246 CAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQV---------------- 289
A SN+AVDN+VERL + VR+GHP+R+ +L S+L ++
Sbjct: 216 TADSNLAVDNLVERL-SESISHVRIGHPSRISSHLLSSSLMYKIQTHNKYKEIEKLKKTF 274
Query: 290 --LRGDNSSLASDIRKEMKALNGK-LLKTKDKNTRR---------------EIQKELRTL 331
L + S I K + L K +LK + N + ++ +++ T+
Sbjct: 275 EKLIQERESFQKPIPKWKRGLTDKQILKLAENNKSQRGIPLKIIKDMAKWIKLNEKIETI 334
Query: 332 SKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL 391
+ K ++ D+I N+ VV TT + A L + FD+V++DEA Q+ + I L
Sbjct: 335 KENIYKIEEEISKDIINNSMVVFTTNSSAYIDILKDYEFDVVVVDEATQSTIPSVLIPLS 394
Query: 392 KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN 451
KG + +LAGDH QLPPT+ S +A K L TLFE L Y + + +L +QYRM+E +M
Sbjct: 395 KGKKFVLAGDHKQLPPTILSEKA--KELSTTLFEMLIKKYPQK-SEILKIQYRMNERLME 451
Query: 452 WSSKQLYNSKIKAHPSGVKRT-------------SSTEPTLLLIDIAGC--DMEEKKDEE 496
+ +K+ YN+ + SGVK ++ E L+ ID C + EE++ +
Sbjct: 452 FPNKEFYNNLL---ISGVKNITLKDLNFKGKTPLTNYENVLIFID-TSCLENYEEQRKDS 507
Query: 497 DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTV 556
S +N+ EA V + I G IG+I+PY QV +++RS D K+ +V+TV
Sbjct: 508 TSYINKLEANVIKNIVESFINEGAKREWIGVISPYDDQV---ELIRSFDLKI---DVNTV 561
Query: 557 DGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLK 616
DGFQGREKE I+IS VRSN E+GFL+D RR+NV++TRA+R+ L+ ++ T+ + K
Sbjct: 562 DGFQGREKEIILISFVRSNKNGELGFLNDLRRLNVSLTRAKRKLILIGNSNTLIKNQTYK 621
Query: 617 RLIEYFEE 624
RLI + ++
Sbjct: 622 RLINFIKK 629
>gi|255075825|ref|XP_002501587.1| predicted protein [Micromonas sp. RCC299]
gi|226516851|gb|ACO62845.1| predicted protein [Micromonas sp. RCC299]
Length = 547
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/377 (42%), Positives = 233/377 (61%), Gaps = 29/377 (7%)
Query: 9 KQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGL 68
K + V+++ FVS L++LE+ AE+ S + +TAQ++G +L L+CVD + GL
Sbjct: 170 KGADVTVEAFVSRTRALLELERAAEVEQSEAVLKGMSAETAQRRGRALLGLRCVDLRGGL 229
Query: 69 MGKTLLEFQ-----STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSIT 123
+GKT++ + +T+ LP HK HDVV ++P K D L GVVYR++D+++
Sbjct: 230 LGKTVVTLELASRKTTQTPPLPPHKLSPHDVVCVRPGKGDTCGEPLCTGVVYRVRDTAVE 289
Query: 124 VAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSK--------GVQNGPAAGLIPVL 175
+A DD+PE L L++E+LANE ++RR+ AL ++ + G G A L+ V+
Sbjct: 290 IAVDDLPERSLEGNLKVERLANETSHRRLVQALDRVGRAPCSAGDPGGNVGVGAALVDVM 349
Query: 176 FGEQKPTVLKKDIAF-KPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIIL 234
FG P A K N LD SQ DA++ AL + +V ++HGPPGTGKTT VVE +
Sbjct: 350 FGNIPPRFHAAAGALHKTVNPGLDASQIDAVAHALGAADVALIHGPPGTGKTTAVVEYVT 409
Query: 235 QEVKRGSKILACAASNIAVDNIVERLVPHR------------VRLVRLGHPARLLPQVLE 282
QEV RGS++L CAASN+AVDN+VERL+ R ++VR+GHPARLL VL+
Sbjct: 410 QEVARGSRVLCCAASNVAVDNLVERLMRSRGDALSKLGSGAQAKIVRIGHPARLLESVLD 469
Query: 283 SALDAQVLRGDNSSLASDIRKEMKALNGKLLK---TKDKNTRREIQKELRTLSKEERKRQ 339
++L+AQVL+ DNS+LA D KE + L LLK KD+ R + ++ELR L+KEE+ RQ
Sbjct: 470 ASLEAQVLKSDNSALARDCEKECRELRRVLLKLDPRKDRTARNDARRELRRLAKEEKARQ 529
Query: 340 QLAVTDVIKNADVVLTT 356
+ AV +VI ++ + T
Sbjct: 530 RKAVDEVIGGSNALCRT 546
>gi|417780507|ref|ZP_12428268.1| AAA domain protein [Leptospira weilii str. 2006001853]
gi|410779216|gb|EKR63833.1| AAA domain protein [Leptospira weilii str. 2006001853]
Length = 637
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 204/647 (31%), Positives = 341/647 (52%), Gaps = 33/647 (5%)
Query: 7 KEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQT 66
KE++ + S++E V A L + EK+ E S SR++ K G T+ L +
Sbjct: 2 KERKFSGSIEELEFVRAEL-EREKKEEDSLFSKDWLSRSIQDRVKLGITLYPLVYEEQSF 60
Query: 67 GLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF 126
G G +L F+ + P+ KF + V + N+ + + ++ L I +A
Sbjct: 61 GREGSWILTFRFPNQEEYPS-KFQSGAPVQIGKNEDRV------RAILVSLHKERIRIAI 113
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMK---DALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
D++PE + L+ L +E +Y+ M DA+I +KG + L+ + +G+ P +
Sbjct: 114 DEVPEWTEDGKCFLDLLPDETSYKEMFHALDAVIGATKGTRLYVNRELL-LGYGKPDPII 172
Query: 184 LK---KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG 240
++ + NL+ SQ+ A KA+ S++V ++HGPPGTGKTTT+ EII Q V G
Sbjct: 173 IRDGDRSRILGRMTGNLNESQRKAAIKAVLSEDVTIIHGPPGTGKTTTLTEIISQLVAEG 232
Query: 241 SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
+IL A ++ A D +VE + + ++RLGHPAR+ L + LD ++ + L S+
Sbjct: 233 KRILVSAPTHSACDLLVESVSTRGIPVLRLGHPARISDAALHATLDYKLFHHPDGKLLSE 292
Query: 301 IRKEMKALNGKLLKT------KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVL 354
R+++ ++ + K K+K R+ + +E++ L K R ++ + ++ + VV+
Sbjct: 293 YRRDVIEISKQAKKYKRNFGEKEKEERKNLFQEVKELKKTIRSMEKGLIDSLVSSHPVVV 352
Query: 355 TTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA 414
+T + L+ FD ++DE++Q LE A WI +LK R ILAGDH QLPP++ S
Sbjct: 353 STPVASARSVLEGRRFDFCVLDESSQGLEPAFWIPILKSDRVILAGDHKQLPPSLFS--- 409
Query: 415 EKKGLGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKI---KAHPSGVK 470
EK L TLFE+ A+ L +L QYRM + I ++ S + Y++++ + P +
Sbjct: 410 EKNSLEFTLFEKAAERLETSGRVFLLDTQYRMKDEISSFPSMEFYSNRLNSGRPEPERIS 469
Query: 471 RTSSTEP---TLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGI 527
T P L ID AG D EE +DS N EA++ + L+++ +I +
Sbjct: 470 NFPETFPFGNALQWIDTAGTDSEEVA-VDDSLTNPFEADLQVRLCTLLLENNWSEEEITV 528
Query: 528 ITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
++PY AQV L+ + ++ L + VST+D FQGRE I++ VRSNS+ GFL + R
Sbjct: 529 LSPYRAQVRLIS-EKLREAGLTKIGVSTIDSFQGRENRCILLGFVRSNSEGRSGFLKESR 587
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
R+NV +TRA+ + D+ T+ D FL RLI + E+ + + E+
Sbjct: 588 RINVGMTRAKDLLLCIGDSSTLLEDPFLSRLIRFVEDKEIFRTAWEF 634
>gi|374339063|ref|YP_005095799.1| DNA helicase [Marinitoga piezophila KA3]
gi|372100597|gb|AEX84501.1| DNA helicase, putative [Marinitoga piezophila KA3]
Length = 649
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 217/680 (31%), Positives = 347/680 (51%), Gaps = 101/680 (14%)
Query: 18 FVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL---- 73
F + I+LEKEAEI A +N KK K A TGL GK L
Sbjct: 3 FFEKLYEAIELEKEAEIQAM------KNEIKLYKKERE----KMGRAITGLSGKYLGREI 52
Query: 74 -----LEFQSTKGDVLPAHKFGTHDVVVLK---PNKADLGSPALGQGVVYRLKDSSITVA 125
++F K D+ + + D+V++ P K+DL + G Y I V+
Sbjct: 53 GNLYIVKF-GRKKDI--KTEISSGDIVLVSKGDPLKSDLTATVTEVGKKY------IIVS 103
Query: 126 FDD-IPEEGLNSP-LRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
F + IP S +RL+ NE+T++RM+ A+++++ L + G+ KPT
Sbjct: 104 FSEKIPVWVYKSKNIRLDLFLNEITFKRMQKAILKMNYA--ENELKILKNIFTGKYKPTP 161
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+KK+ K F+++L+ SQK+A+ KA+ SK +F++HGPPGTGKT T+ EII+QE K+ K+
Sbjct: 162 IKKE-KIKFFDNSLNKSQKEAVEKAIGSKEIFLIHGPPGTGKTRTLTEIIIQEAKKEKKV 220
Query: 244 LACAASNIAVDNIVERLVPHR-VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR 302
L A SN A DNI+ L+ + ++ RLGHP R+ + + +L + IR
Sbjct: 221 LVTADSNAATDNILGNLIKYETFKICRLGHPGRVDEDLKKHSLYYIAENHEEYKEIVKIR 280
Query: 303 KEMKALNGKLLKT----------------------KDKNTRR-------------EIQKE 327
E L+ K K KD+ TR +I E
Sbjct: 281 DEAMQLSEKRDKIGIKPTPQNRRGLTDEQIEKYALKDRGTRGIFPDVMKKMYEWIKINNE 340
Query: 328 LRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACW 387
++ L + R+ ++ + +I+ ++++T + + +L+N +FD+V+IDEA+Q+ E +C+
Sbjct: 341 VQKLFDKAREMEEELIKKIIEEYQIIVSTNSTSGIDELENITFDVVVIDEASQSTEPSCY 400
Query: 388 IALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHE 447
I + G + I+ GDH QLPPT+ + + E L +TLFER+ + Y +++L VQYRM++
Sbjct: 401 IPITHGKKIIMGGDHRQLPPTILNKDVE-NILSKTLFERMINKYPSH-SAILKVQYRMND 458
Query: 448 HIMNWSSKQLYNSKIKAHPSGVKRTSS----------------TEPTLLLIDIAGCD-ME 490
IM +S+++ YN +++ + +T + T P + + A + E
Sbjct: 459 KIMQFSNQKFYNGILRSADNVYNQTLTLDLSEVNDEKTKEILDTTPIVFVDTSANPERFE 518
Query: 491 EKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN 550
K S N EA++ + A L + V D GIITPY Q +K L+ K D
Sbjct: 519 IYKKGSKSKYNPLEAKIVIELATILKEQNV---DFGIITPYKDQ---MKYLKEKTD---- 568
Query: 551 MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS 610
V+TVDGFQGRE + II+S+ RSN + +GFL D RR+NVA+TRAR++ ++ D T+
Sbjct: 569 FYVNTVDGFQGRENDVIILSLTRSNDEGTIGFLKDERRLNVAITRARKKLIIIGDISTLK 628
Query: 611 SDGFLKRLIEYFEEHAEYLS 630
+ LI Y H + +S
Sbjct: 629 NYPLFDELINYISLHGKIIS 648
>gi|383123539|ref|ZP_09944218.1| putative DNA helicase [Bacteroides sp. 1_1_6]
gi|251839647|gb|EES67730.1| putative DNA helicase [Bacteroides sp. 1_1_6]
Length = 648
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 176/497 (35%), Positives = 274/497 (55%), Gaps = 24/497 (4%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + N A L L G QKP + P+ L+ +Q+ A
Sbjct: 158 DETSYRAMFEALEDTIRAKGNR-LAELRDTLLGTQKPGFRELYPVRFPW---LNSTQETA 213
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 214 VNKVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWICEKLVDRG 273
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L + + + IRK ++ + G ++ + R +
Sbjct: 274 VPVLRIGNPTRVNDKMLSFTYERRFENHPSYPELWGIRKSIREM-GSRMRRGSYSEREGM 332
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
+ + L + + L D+ +A V+ +TL + R L+ F + IDEAAQALE
Sbjct: 333 RSRMSRLRDRATELEILINADLFDSARVIASTLVSSNHRLLNGRRFPTLFIDEAAQALEA 392
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R ILAGDH QLPPT++ +EA + GL TL E++ V S+L VQYR
Sbjct: 393 ACWIAIRKADRVILAGDHCQLPPTIKCIEAARGGLDHTLMEKVVQQKPSAV-SLLKVQYR 451
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK----------K 493
MHE IM + S+ YN +++A P R + + ID + D E+ K
Sbjct: 452 MHEAIMRFPSEWFYNGELEAAPEVRNRGILDFDTPMNWIDTSEMDFHEEFVGESFGRINK 511
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNME- 552
E + + E EA ++ R++ + D G+I+PY AQV L+ L+
Sbjct: 512 QEANLLLQELEAYISRIGKARILDESI---DFGLISPYKAQVQYLRSKIRGSSFLRPFRS 568
Query: 553 ---VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
V+TVDGFQG+E++ + IS+VR+N ++GFL+D RRMNVA+TRAR + ++ D T+
Sbjct: 569 LITVNTVDGFQGQERDVVFISLVRANEDGQIGFLNDLRRMNVAITRARMKLVILGDATTL 628
Query: 610 SSDGFLKRLIEYFEEHA 626
+ F ++LI+Y + A
Sbjct: 629 TKHAFYRKLIQYIRQEA 645
>gi|423344038|ref|ZP_17321751.1| hypothetical protein HMPREF1077_03181 [Parabacteroides johnsonii
CL02T12C29]
gi|409213558|gb|EKN06575.1| hypothetical protein HMPREF1077_03181 [Parabacteroides johnsonii
CL02T12C29]
Length = 637
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 175/498 (35%), Positives = 283/498 (56%), Gaps = 18/498 (3%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +Y+ M +AL + + N A L VL G+ T + F L+ SQ++A
Sbjct: 141 DETSYKTMFNALSTVIQAKGNR-LAYLRDVLLGK---TPAGRRTLFPMRFPWLNLSQEEA 196
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++ L++K+V ++HGPPGTGKTTT+VE I + + R ++++ CA SN AVD I E+LV
Sbjct: 197 VNHVLAAKDVSIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNTAVDWISEKLVDRG 256
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
+ ++R+G+P R+ ++L + + + + IRK ++ + L + K + + +
Sbjct: 257 IHVLRIGNPTRVNDKMLSFTYERRFESHPDYAELWGIRKAIREIQSNL-RRKSHSEKETV 315
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
+ L L + + T++ A VV TL G+ +R L N +F + IDEAAQALE
Sbjct: 316 RNRLSRLRFRATELEVKIDTELFDEARVVACTLVGSANRVLTNRNFTTLFIDEAAQALEA 375
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R ILAGDH QLPPT++ +EA + GL TL +++ D E S+L QYR
Sbjct: 376 ACWIAIGKADRVILAGDHHQLPPTIKCIEAARGGLDHTLMQKITDR-KPETVSLLKTQYR 434
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEKK-DEEDSTMNE 502
M+E IM + S+ Y ++++ P R + ++ +D A C EE + + S +N+
Sbjct: 435 MNESIMRFPSRWFYRDELQSAPEVKHRGILEFDTPVVWLDTADCHFEEDQLTDSMSRINK 494
Query: 503 GEAEVAMAHAKRLIQSGV------HASDIGIITPYAAQVVLLKILRSKDDKLKNME---- 552
EA + ++ ++ I+ + D G+I+PY +QV ++ L ++ K
Sbjct: 495 DEATLLVSTLQKYIEKIGKERVLDESIDFGLISPYKSQVQYIRGLVKRNVFFKPFRRLIT 554
Query: 553 VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSD 612
V TVDGFQG+E++ I+IS+VR+N K +GFL D RRMNVA+TRAR + ++ D T++
Sbjct: 555 VHTVDGFQGQERDVIMISLVRANDKGRIGFLGDLRRMNVAITRARMKLMILGDAPTLTRH 614
Query: 613 GFLKRLIEYFEEHAEYLS 630
F K L EY E+ + +S
Sbjct: 615 AFYKELYEYIRENGQVVS 632
>gi|116328077|ref|YP_797797.1| DNA and RNA helicase subunit [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116120821|gb|ABJ78864.1| DNA and RNA helicase subunit [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
Length = 637
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 208/650 (32%), Positives = 339/650 (52%), Gaps = 39/650 (6%)
Query: 7 KEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQT 66
KE++ + S++E V A L + EK+ E SR+L K G + L +
Sbjct: 2 KERKFSSSIEELEFVRAEL-EREKKEEGFLFSKDWLSRSLQDRIKLGIALYPLVYEEQSF 60
Query: 67 GLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF 126
G G +L F+ + P+ KF +V + N+ + + ++ L I +A
Sbjct: 61 GRGGSWILTFRFPNQEEYPS-KFQPGALVQIGKNEDRV------RAILVSLHKERIRIAI 113
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPV----LFGEQKP- 181
+++PE + L+ L +E +Y+ M AL V + P + V L G KP
Sbjct: 114 EEVPEWIEDGKCFLDLLPDETSYKEMLYAL----DAVSSAPKGTRLYVNRELLLGYGKPD 169
Query: 182 --TVLKKDIA--FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV 237
+ K D + NS+L+ SQK+A+ + + S+++ ++HGPPGTGKTTT+ EII Q V
Sbjct: 170 PIAIRKSDETRILQRLNSSLNPSQKNAVLRCVLSEDIAVIHGPPGTGKTTTLTEIISQIV 229
Query: 238 KRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSL 297
K+L A ++ A D +VE + + ++RLGHPAR+ L + LD ++ + L
Sbjct: 230 AEEKKVLVSAPTHSACDLLVESISAKGISVLRLGHPARISDTALHTTLDYKLFHHSDGKL 289
Query: 298 ASDIRKEMKALNGKLLKT------KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNAD 351
++ R+++ ++ + K K+K R+ + +E++ L K R ++ + +I +
Sbjct: 290 LNEYRRDVIEISKQAKKYKRNFGEKEKEDRKNLFQEVKELKKTIRSMEKGLIDSLISSHS 349
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
V+++T + L+ FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S
Sbjct: 350 VIVSTPVASARSVLEGRRFDFCVLDESSQALEPATWIPILKSDRVILAGDHKQLPPTLFS 409
Query: 412 VEAEKKGLGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK 470
EK L TLFE+ A+ L ML QYRM + I ++ S + Y++++K+ G +
Sbjct: 410 ---EKNSLEFTLFEKAAERLETSGRVFMLDTQYRMKDEIASFPSMEFYSNRLKSGRPGPE 466
Query: 471 RTSSTEPT------LLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD 524
+ S+ T L ID AG D EE +DS N EA++ + L ++ +
Sbjct: 467 KISNFPKTFPFRDALQWIDTAGTDSEEVA-VDDSLTNPFEADLQVRLCTLLQENNWPEEE 525
Query: 525 IGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLS 584
I I++PY AQV LL + ++ L ++VST+D FQGRE I + VRSNS+ GFL
Sbjct: 526 ITILSPYRAQVRLLS-EKLQEAGLSKIQVSTIDSFQGRENRCIFLGFVRSNSEGRSGFLK 584
Query: 585 DRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
+ RR+NV +TRA+ + D+ T+ D FL R I + EE + + E+
Sbjct: 585 ESRRINVGMTRAKDLLLCIGDSSTLLEDPFLSRFIRFIEEKKFFRTAWEF 634
>gi|29347483|ref|NP_810986.1| helicase [Bacteroides thetaiotaomicron VPI-5482]
gi|29339383|gb|AAO77180.1| putative helicase [Bacteroides thetaiotaomicron VPI-5482]
Length = 652
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 179/500 (35%), Positives = 277/500 (55%), Gaps = 30/500 (6%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + N A L L G QKP + P+ L+ +Q+ A
Sbjct: 162 DETSYRAMFEALEDTIRAKGNR-LAELRDTLLGTQKPGFRELYPVRFPW---LNSTQETA 217
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 218 VNKVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWICEKLVDRG 277
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD---IRKEMKALNGKLLKTKDKNTR 321
V ++R+G+P R+ ++L + R +N S + IRK ++ + G ++ + R
Sbjct: 278 VPVLRIGNPTRVNDKMLSFTYER---RFENHSAYPELWGIRKSIREM-GSRMRRGSYSER 333
Query: 322 REIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQA 381
++ + L + + L D+ +A V+ +TL + R L+ F + IDEAAQA
Sbjct: 334 EGMRSRMSRLRDRATELEILINADLFDSARVIASTLVSSNHRLLNGRRFPTLFIDEAAQA 393
Query: 382 LEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTV 441
LE ACWIA+ K R ILAGDH QLPPT++ +EA + GL TL E++ V S+L V
Sbjct: 394 LEAACWIAIRKADRVILAGDHCQLPPTIKCIEAARGGLDHTLMEKVVQQKPSAV-SLLKV 452
Query: 442 QYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK-------- 492
QYRMHE IM + S+ YN +++A P R + + ID + D E+
Sbjct: 453 QYRMHEAIMRFPSEWFYNGELEAAPEVRNRGILDFDTPMNWIDTSEMDFHEEFVGESFGR 512
Query: 493 --KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN 550
K E + + E EA ++ R++ + D G+I+PY AQV L+ L+
Sbjct: 513 INKQEANLLLQELEAYISRIGKARILDESI---DFGLISPYKAQVQYLRSKIRGSSFLRP 569
Query: 551 ME----VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 606
V+TVDGFQG+E++ + IS+VR+N ++GFL+D RRMNVA+TRAR + ++ D
Sbjct: 570 FRSLITVNTVDGFQGQERDVVFISLVRANEDGQIGFLNDLRRMNVAITRARMKLVILGDA 629
Query: 607 ETVSSDGFLKRLIEYFEEHA 626
T++ F ++LI+Y + A
Sbjct: 630 TTLTKHAFYRKLIQYIRQEA 649
>gi|256810316|ref|YP_003127685.1| DNA helicase [Methanocaldococcus fervens AG86]
gi|256793516|gb|ACV24185.1| DNA helicase [Methanocaldococcus fervens AG86]
Length = 655
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 228/675 (33%), Positives = 358/675 (53%), Gaps = 114/675 (16%)
Query: 18 FVSVMAPLIDLEKEAEISAS----ITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
+V LI+LE+ E+ I G R + G ILNLK L G T+
Sbjct: 7 YVKKFMELIELERRCEMDFHKNEIIRLGKKR-----ENVGRAILNLKGKFLGESL-GCTI 60
Query: 74 LEF---QSTKGDVLPAHKFGTHDVVVL---KPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ F + K ++ P DVV++ P ++DL + + G + I VAFD
Sbjct: 61 VRFGRKKPFKTEISPG------DVVLISKENPLQSDLYANVIYVG------KNFIDVAFD 108
Query: 128 -DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
D+ +R++ N++T++RMK+AL + ++ + A +I + +KP L++
Sbjct: 109 VDVLRWVYKERVRIDLYVNDITFKRMKEALREFAR--KRDKLAYIILGIEHPEKP--LRE 164
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILA 245
DI + ++ +L+ SQK A+ KA+ SK+++++HGPPGTGKT T+ E+I+QEV+ K+LA
Sbjct: 165 DIELEFYDKHLNESQKLAVKKAVLSKDLYLIHGPPGTGKTRTLTEVIVQEVRFNKHKVLA 224
Query: 246 CAASNIAVDNIVERLVPHR--VRLVRLGHPARL--------LPQVLESALDAQVLRGDNS 295
A SNIA DNI+E L+ +++VR+GHP R+ LP ++E+ Q +
Sbjct: 225 TADSNIAADNILEYLIKKYPDLKVVRVGHPTRISKDLIQHSLPYLIENHEKYQEI----L 280
Query: 296 SLASDIRKEMKALNGKLLKTKDKNTR----------REIQKELRTLSKEE---------R 336
SL I KE+K K LK + R + +K+ R + KE+ R
Sbjct: 281 SLKEKI-KEIKEQRDKFLKPSPRWRRGMSDEQILKVAKRRKDYRGVPKEKIISMAEWIVR 339
Query: 337 KRQ------------QLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
++ + + +++ ADV++ T + A S L FD+V+IDE +QA+E
Sbjct: 340 NKKIKKIINSLDEITEKIMNEILSEADVIVATNSMAGSEILKGWEFDVVVIDEGSQAMEP 399
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
+C I ++KG + I+AGDH QLPPTV S E + L +TLFERL Y E +S+L +QYR
Sbjct: 400 SCLIPIVKGKKLIMAGDHKQLPPTVLS---ENEELKKTLFERLIKKYP-EFSSILEIQYR 455
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVK-----------------RTSSTEPTLLLIDIAGC 487
M+E IM + ++ Y++K+KA S VK R E + + G
Sbjct: 456 MNEKIMEFPNRMFYDNKLKADES-VKNITLLDLVKEEEIDESDRDIVNEIPVQFFHVEGV 514
Query: 488 DMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDD 546
E+KD+E S N EAE + K+LI+ + + +ITPY AQV L+ R ++
Sbjct: 515 ---ERKDKESPSYYNIEEAEKVLEVVKKLIKYKIPTN---VITPYDAQVRYLR--RLFEE 566
Query: 547 KLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 606
+ ++EV+TVDGFQGRE EAI+IS VR+ K GFL D RR+NVA+TRA+R+ L+ +
Sbjct: 567 QNIDVEVNTVDGFQGRENEAIVISFVRT---KNFGFLKDLRRLNVAITRAKRKLILIGNE 623
Query: 607 ETVSSDGFLKRLIEY 621
+ D +I++
Sbjct: 624 NLLKQDKVYNEMIKW 638
>gi|218261116|ref|ZP_03476067.1| hypothetical protein PRABACTJOHN_01731 [Parabacteroides johnsonii
DSM 18315]
gi|218224216|gb|EEC96866.1| hypothetical protein PRABACTJOHN_01731 [Parabacteroides johnsonii
DSM 18315]
Length = 638
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 180/505 (35%), Positives = 285/505 (56%), Gaps = 32/505 (6%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +Y+ M +AL + + N A L VL G+ T + F L+ SQ++A
Sbjct: 142 DETSYKTMFNALSTVIQAKGNR-LAYLRDVLLGK---TPAGRRTLFPMRFPWLNLSQEEA 197
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++ L++K+V ++HGPPGTGKTTT+VE I + + R ++++ CA SN AVD I E+LV
Sbjct: 198 VNHVLAAKDVSIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNTAVDWISEKLVDRG 257
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
+ ++R+G+P R+ ++L + + + + IRK ++ + N RR+
Sbjct: 258 IHVLRIGNPTRVNDKMLSFTYERRFESHPDYAELWGIRKAIREIQS--------NLRRKS 309
Query: 325 QKELRT----LSKEERKRQQLAV---TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDE 377
E T LS+ + +L V T++ A VV TL G+ +R L N +F + IDE
Sbjct: 310 HSEKETGRNRLSRLRFRATELEVKIDTELFDEARVVACTLVGSANRVLTNRNFTTLFIDE 369
Query: 378 AAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS 437
AAQALE ACWIA+ K R ILAGDH QLPPT++ +EA + GL TL +++ D E S
Sbjct: 370 AAQALEAACWIAIGKADRVILAGDHHQLPPTIKCIEAARGGLDHTLMQKITDR-KPETVS 428
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEKK-DE 495
+L QYRM+E IM + S+ Y ++++ P R + ++ +D A C EE + +
Sbjct: 429 LLKTQYRMNESIMRFPSRWFYRDELQSAPEVKHRGILEFDTPVVWLDTADCHFEEDQLTD 488
Query: 496 EDSTMNEGEAEVAMAHAKRLIQSGV------HASDIGIITPYAAQVVLLKILRSKDDKLK 549
S +N+ EA + ++ ++ I+ + D G+I+PY +QV ++ L ++ K
Sbjct: 489 SMSRINKDEATLLVSTLQKYIEKIGKERVLDESIDFGLISPYKSQVQYIRGLVKRNVFFK 548
Query: 550 NME----VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCD 605
V TVDGFQG+E++ I+IS+VR+N K +GFL D RRMNVA+TRAR + ++ D
Sbjct: 549 PFRRLITVHTVDGFQGQERDVIMISLVRANDKGRIGFLGDLRRMNVAITRARMKLMILGD 608
Query: 606 TETVSSDGFLKRLIEYFEEHAEYLS 630
T++ F K L EY E+ + +S
Sbjct: 609 APTLTRHAFYKELYEYIRENGQVVS 633
>gi|418719080|ref|ZP_13278280.1| type III restriction enzyme, res subunit [Leptospira borgpetersenii
str. UI 09149]
gi|410744233|gb|EKQ92974.1| type III restriction enzyme, res subunit [Leptospira borgpetersenii
str. UI 09149]
Length = 637
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 208/650 (32%), Positives = 338/650 (52%), Gaps = 39/650 (6%)
Query: 7 KEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQT 66
KE++ + S++E V A L + EK+ E SR+L K G + L +
Sbjct: 2 KERKFSSSIEELEFVRAEL-EREKKEEGFLFSKDWLSRSLQDRIKLGIALYPLVYEEQSF 60
Query: 67 GLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF 126
G G +L F+ + P+ KF V + N+ + + ++ L I +A
Sbjct: 61 GREGSWILTFRFPNQEEYPS-KFQPGAPVQIGKNEDRV------RAILVSLHKERIRIAI 113
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPV----LFGEQKP- 181
+++PE + L+ L +E +Y+ M AL V + P + V L G KP
Sbjct: 114 EEVPEWIEDGKCFLDLLPDETSYKEMLYAL----DAVSSAPKGTRLYVNRELLLGYGKPD 169
Query: 182 --TVLKKDIA--FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV 237
+ K D + NS+L+ SQK+A+ + + S+++ ++HGPPGTGKTTT+ EII Q V
Sbjct: 170 PIAIRKSDETRILQRLNSSLNPSQKNAVLRCVLSEDIAVIHGPPGTGKTTTLTEIISQIV 229
Query: 238 KRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSL 297
K+L A ++ A D +VE + + ++RLGHPAR+ L + LD ++ + L
Sbjct: 230 AEEKKVLVSAPTHSACDLLVESISAKGISVLRLGHPARISDTALHTTLDYKLFHHSDGKL 289
Query: 298 ASDIRKEMKALNGKLLKT------KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNAD 351
++ R+++ ++ + K K+K R+ + +E++ L K R ++ + +I +
Sbjct: 290 LNEYRRDVIEISKQAKKYKRNFGEKEKEDRKNLFQEVKELKKTIRSMEKGLIDSLISSHS 349
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
V+++T + L+ FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S
Sbjct: 350 VIVSTPVASARSVLEGRRFDFCVLDESSQALEPATWIPILKSDRVILAGDHKQLPPTLFS 409
Query: 412 VEAEKKGLGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK 470
EK L TLFE+ A+ L ML QYRM + I ++ S + Y++++K+ G +
Sbjct: 410 ---EKNSLEFTLFEKAAERLETSGRVFMLDTQYRMRDEIASFPSMEFYSNRLKSGRPGPE 466
Query: 471 RTSSTEPT------LLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD 524
+ S+ T L ID AG D EE +DS N EA++ + L ++ +
Sbjct: 467 KISNFPKTFPFGDALQWIDTAGTDSEEVA-VDDSLTNPFEADLQVRLCTLLQENNWPEEE 525
Query: 525 IGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLS 584
I I++PY AQV LL + ++ L ++VST+D FQGRE I + VRSNS+ GFL
Sbjct: 526 ITILSPYRAQVRLLS-EKLQEAGLSKIQVSTIDSFQGRENRCIFLGFVRSNSEGRSGFLK 584
Query: 585 DRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
+ RR+NV +TRA+ + D+ T+ D FL R I + EE + + E+
Sbjct: 585 ESRRINVGMTRAKDLLLCIGDSSTLLEDPFLSRFIRFMEEKKFFRTAWEF 634
>gi|221508630|gb|EEE34199.1| DNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 1320
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 253/861 (29%), Positives = 376/861 (43%), Gaps = 266/861 (30%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
SL V + L+ +E AE ++ + +L + +G + L ++GL +TL
Sbjct: 3 SLDRLVDLHRKLLQVEHAAETEELESALKTLSLTELEAQGVVLPRLVIHQVRSGLYSRTL 62
Query: 74 LEFQSTKGDVL-----------------------PAHKFGTHDVV-VLKPNKAD--LGSP 107
++F + + + P H+F D+V V + A GS
Sbjct: 63 VDFCTKRAAQVFQERQKKQSEPSEEAAAAAALLPPQHRFTPGDIVGVFEGPYAQQTAGSA 122
Query: 108 -ALGQGVVYRLKDSSITVAFDDIPEEGLNSPLR---------------------LEKLAN 145
AL GVV+++ ++VAF+ +E L P R L +++
Sbjct: 123 GALASGVVHKVHAQVLSVAFES--DEWLGRPERADGAAPGGKGRHEDESRGTFHLALISS 180
Query: 146 EVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK-------------------- 185
VT R AL +L NGPA LI + FG Q+P L
Sbjct: 181 SVTIDRQLRALERLKNYAPNGPAQTLINLCFGNQQPQPLSPGPHLAKEATVSREADLTVG 240
Query: 186 -----KDIA---------------------FKPFNSNLDHSQKDAISKALSSKNVFMLHG 219
DI+ F+ L SQK A+ L S+++ ++HG
Sbjct: 241 THREISDISDSSYCPSSVSSSSSLDLSGCGVSWFSPTLTESQKRAVLLGLRSRDLALIHG 300
Query: 220 PPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVER-----------------LVP 262
PPGTGK+T ++E++LQ RG+++LACA SN+AVDN++ER L
Sbjct: 301 PPGTGKSTALLELLLQLASRGARVLACAPSNVAVDNLLERVAAFANVNSNASLEASRLAG 360
Query: 263 HRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEM----------KALNGKL 312
R VRLGHPAR+ + L++QV R + ++L+ +IR E+ K L +
Sbjct: 361 RLRRCVRLGHPARVDENLSRFCLESQVQRSEGAALSREIRLELDRSLEMLRDRKKLE-RH 419
Query: 313 LKTKDKNTR--------------------------REIQKELRTLSKEERKRQQLAVTDV 346
++ + K TR RE+++E++TL +E R ++ AV +V
Sbjct: 420 MQRRQKETRGSGPTGLGESSALSSSTRASTWSQAKRELREEIQTLRRELRAFERRAVEEV 479
Query: 347 IKNADVVLTTLTGA--------------VSRKLDNTSFDLVIIDEAAQA----------- 381
++ + +V T G+ S K + FD+V+IDEAAQA
Sbjct: 480 LEQSPIVFATCVGSDNEALKQFFAPPGDASGKPGRSGFDVVVIDEAAQASLRLLPLFVLV 539
Query: 382 --LEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFER-LADLYGDEVTSM 438
LE CWI LL G R +LAGDH QLPPT++S +AE GLG TLFER + +G ++ +
Sbjct: 540 AALEAVCWIPLLYGHRAVLAGDHCQLPPTIKSRKAEDGGLGVTLFERQMHAQHGPRISQL 599
Query: 439 LTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR--------------------------- 471
L Q+RMH IM WS++Q Y+ ++A S R
Sbjct: 600 LDTQFRMHRKIMGWSNEQFYHGALRAADSVASRLLEAKYPRLKDETEHRGKRGEADLGQR 659
Query: 472 ----------------TSSTEPTLLLIDIAGCD-MEEKKDEEDSTM-------------- 500
+ P L ID AG +EE EED ++
Sbjct: 660 ADSSPGKRADGELETFATCVAPPFLWIDTAGVSWLEEDNQEEDHSLLRQASASSTALQLH 719
Query: 501 ----NEGEAEVAMAHAKRLIQS-GVHASDIGIITPYAAQVVLLK-ILRS----------- 543
N GEA + + + L+ + GV DI IITPY QV LL+ LR
Sbjct: 720 ASKSNRGEAALVVKRLQDLVWNFGVKPEDICIITPYRQQVQLLRQYLREAAEAAPALALG 779
Query: 544 ---------KDDKLK----NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
+ D L+ ++ V+TVDGFQGRE E + IS+VRSN K EVGFL D RR+N
Sbjct: 780 KKEGEARERETDSLRASFAHIPVNTVDGFQGREGEVVAISLVRSNRKHEVGFLKDVRRLN 839
Query: 591 VAVTRARRQCCLVCDTETVSS 611
VAVTRA+ +V D+ET+++
Sbjct: 840 VAVTRAKCHLLIVGDSETIAA 860
>gi|423303764|ref|ZP_17281763.1| hypothetical protein HMPREF1072_00703 [Bacteroides uniformis
CL03T00C23]
gi|423307517|ref|ZP_17285507.1| hypothetical protein HMPREF1073_00257 [Bacteroides uniformis
CL03T12C37]
gi|392687095|gb|EIY80392.1| hypothetical protein HMPREF1072_00703 [Bacteroides uniformis
CL03T00C23]
gi|392690126|gb|EIY83397.1| hypothetical protein HMPREF1073_00257 [Bacteroides uniformis
CL03T12C37]
Length = 610
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 181/497 (36%), Positives = 278/497 (55%), Gaps = 30/497 (6%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + N A L +L G K + P+ L+ +Q+ A
Sbjct: 121 DETSYRTMFEALEDTLRSKGN-RLAELRDILLGTSKAGFRELYPVRFPW---LNSTQETA 176
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 177 VNKVLCARDVAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWISEKLVDRG 236
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD---IRKEMKALNGKLLKTKDKNTR 321
V ++R+G+P R+ ++L + R +N L + IRK ++ L G + + R
Sbjct: 237 VNVLRIGNPTRVNDKMLSFTYER---RFENHPLYPELWSIRKNLREL-GSRARRGSYDER 292
Query: 322 REIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQA 381
++ + L + ++ A V+ +TL + R L+ F + IDEAAQA
Sbjct: 293 EGVRSRMSRLRDRATALEIQINAELFDGAHVIASTLVSSNHRLLNGRRFGTLFIDEAAQA 352
Query: 382 LEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTV 441
LE ACWIA+ K R +LAGDH QLPPT++ EA + GL RTL E++ V S+L V
Sbjct: 353 LEAACWIAIRKADRVVLAGDHCQLPPTIKCYEAARGGLERTLMEKVVS-NKPAVVSLLKV 411
Query: 442 QYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDM-EEKKDEEDST 499
QYRMHE IM + S+ YN +++A P R + + ID + D EE E
Sbjct: 412 QYRMHEEIMKFPSQWFYNGELEAAPEVRYRGILDWDTPIHWIDTSEMDFKEEFVGETFGR 471
Query: 500 MNEGEAEVAMAHAK---------RLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN 550
+N+ EA++ ++ K R+++ + DIGII+PY AQV L+ D LK
Sbjct: 472 INKAEADLLLSELKIYINRIGGNRILEEKI---DIGIISPYKAQVQYLRSKIKADASLKP 528
Query: 551 ----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 606
V+TVDGFQG+E++ I IS+VR+N + ++GFL+D RRMNVA+TRAR + ++ +
Sbjct: 529 YRSLFTVNTVDGFQGQERDVIFISLVRANEEGQIGFLNDLRRMNVAITRARMKLVILGEA 588
Query: 607 ETVSSDGFLKRLIEYFE 623
ET+ GF ++L+E+ +
Sbjct: 589 ETLKHHGFYRKLLEFIQ 605
>gi|221488111|gb|EEE26325.1| DNA-binding protein, putative [Toxoplasma gondii GT1]
Length = 1320
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 254/859 (29%), Positives = 374/859 (43%), Gaps = 266/859 (30%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
SL V + L+ +E AE ++ + +L + +G + L ++GL +TL
Sbjct: 3 SLDRLVDLHRKLLQVEHAAETEELESALKTLSLTELEAQGVVLPRLVIHQVRSGLYSRTL 62
Query: 74 LEFQSTKGDVL-----------------------PAHKFGTHDVV-VLKPNKAD--LGSP 107
++F + + + P H+F D+V V + A GS
Sbjct: 63 VDFCTKRAAQVFQERQKKQSEPSEEAAAAAALLPPQHRFTPGDIVGVFEGPYAQQTAGSA 122
Query: 108 -ALGQGVVYRLKDSSITVAFDDIPEEGLNSPLR---------------------LEKLAN 145
AL GVV+++ ++VAF+ +E L P R L +++
Sbjct: 123 GALASGVVHKVHAQVLSVAFES--DEWLGRPERADGAAPGGKGRHEDESRGTFHLALISS 180
Query: 146 EVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK-------------------- 185
VT R AL +L NGPA LI + FG Q+P L
Sbjct: 181 SVTIDRQLRALERLKNYAPNGPAQTLINLCFGNQQPQPLSPGPHLAKEATVSREADLTVG 240
Query: 186 -----KDIA---------------------FKPFNSNLDHSQKDAISKALSSKNVFMLHG 219
DI+ F+ L SQK A+ L S+++ ++HG
Sbjct: 241 THREISDISDSSYCPSSVSSSSSLDLSGCGVSWFSPTLTESQKRAVLLGLRSRDLALIHG 300
Query: 220 PPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVE-----------------RLVP 262
PPGTGK+T ++E++LQ RG+++LACA SN+AVDN++E RL
Sbjct: 301 PPGTGKSTALLELLLQLASRGARVLACAPSNVAVDNLLERVAAFANVNSNASLEASRLAG 360
Query: 263 HRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEM----------KALNGKL 312
R VRLGHPAR+ + L++QV R + ++L+ +IR E+ K L +
Sbjct: 361 RLRRCVRLGHPARVDENLSRFCLESQVQRSEGAALSREIRLELDRSLEMLRDRKKLE-RH 419
Query: 313 LKTKDKNTR--------------------------REIQKELRTLSKEERKRQQLAVTDV 346
++ K K TR RE+++E++TL +E R ++ AV +V
Sbjct: 420 MQRKQKETRGSGPTGLGESSALSSSTRASTWSQAKRELREEIQTLRRELRAFERRAVEEV 479
Query: 347 IKNADVVLTTLTGA--------------VSRKLDNTSFDLVIIDEAAQ------------ 380
++ + +V T G+ S K + FD+V+IDEAAQ
Sbjct: 480 LEQSPIVFATCVGSDNEALKQFFAPPGDASGKPGRSGFDVVVIDEAAQASLRLLPLFVLV 539
Query: 381 -ALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFER-LADLYGDEVTSM 438
ALE CWI LL G R +LAGDH QLPPT++S +AE GLG TLFER + +G ++ +
Sbjct: 540 AALEAVCWIPLLYGHRAVLAGDHCQLPPTIKSRKAEDGGLGVTLFERQMHAQHGPRISQL 599
Query: 439 LTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR--------------------------- 471
L Q+RMH IM WS++Q Y+ ++A S R
Sbjct: 600 LDTQFRMHRKIMGWSNEQFYHGALRAADSVASRLLEAKYPRLKDETEHRGKRGEADLGQR 659
Query: 472 ----------------TSSTEPTLLLIDIAGCD-MEEKKDEEDSTM-------------- 500
+ P L ID AG +EE EED ++
Sbjct: 660 ADSSPGKRADGELETFATCVAPPFLWIDTAGVSWLEEDNQEEDHSLLRQASASSTALQLH 719
Query: 501 ----NEGEAEVAMAHAKRLIQS-GVHASDIGIITPYAAQVVLLK-ILRS----------- 543
N GEA + + + L+ + GV DI IITPY QV LL+ LR
Sbjct: 720 ASKSNRGEAALVVKRLQDLVWNFGVKPEDICIITPYRQQVQLLRQYLREAAEAAPALALG 779
Query: 544 ---------KDDKLK----NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
+ D L+ ++ V+TVDGFQGRE E + IS+VRSN K EVGFL D RR+N
Sbjct: 780 KKEGEARERETDSLRASFAHIPVNTVDGFQGREGEVVAISLVRSNRKHEVGFLKDVRRLN 839
Query: 591 VAVTRARRQCCLVCDTETV 609
VAVTRA+ +V D+ET+
Sbjct: 840 VAVTRAKCHLLIVGDSETI 858
>gi|418738959|ref|ZP_13295352.1| type III restriction enzyme, res subunit [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|421094167|ref|ZP_15554887.1| type III restriction enzyme, res subunit [Leptospira borgpetersenii
str. 200801926]
gi|410362893|gb|EKP13926.1| type III restriction enzyme, res subunit [Leptospira borgpetersenii
str. 200801926]
gi|410745657|gb|EKQ98567.1| type III restriction enzyme, res subunit [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|456887825|gb|EMF98838.1| type III restriction enzyme, res subunit [Leptospira borgpetersenii
str. 200701203]
Length = 637
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 208/650 (32%), Positives = 338/650 (52%), Gaps = 39/650 (6%)
Query: 7 KEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQT 66
KE++ + S++E V A L + EK+ E SR+L K G + L +
Sbjct: 2 KERKFSSSIEELEFVRAEL-EREKKEEGFLFSKDWLSRSLQDRIKLGIALYPLVYEEQSF 60
Query: 67 GLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF 126
G G +L F+ + P+ KF V + N+ + + ++ L I +A
Sbjct: 61 GREGSWILTFRFPNQEEYPS-KFQPGAPVQIGKNEDRV------RAILVSLHKERIRIAI 113
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPV----LFGEQKP- 181
+++PE + L+ L +E +Y+ M AL V + P + V L G KP
Sbjct: 114 EEVPEWIEDGKCFLDLLPDETSYKEMLYAL----DAVSSAPKGTRLYVNRELLLGYGKPD 169
Query: 182 --TVLKKDIA--FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV 237
+ K D + NS+L+ SQK+A+ + + S+++ ++HGPPGTGKTTT+ EII Q V
Sbjct: 170 PIAIRKSDETRILQRLNSSLNPSQKNAVLRCVLSEDIAVIHGPPGTGKTTTLTEIISQIV 229
Query: 238 KRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSL 297
K+L A ++ A D +VE + + ++RLGHPAR+ L + LD ++ + L
Sbjct: 230 AEEKKVLVSAPTHSACDLLVESISAKGISVLRLGHPARISDTALHTTLDYKLFHHSDGKL 289
Query: 298 ASDIRKEMKALNGKLLKT------KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNAD 351
++ R+++ ++ + K K+K R+ + +E++ L K R ++ + +I +
Sbjct: 290 LNEYRRDVIEISKQAKKYKRNFGEKEKEDRKNLFQEVKELKKTIRSMEKGLIDSLISSHS 349
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
V+++T + L+ FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S
Sbjct: 350 VIVSTPVASARSVLEGRRFDFCVLDESSQALEPATWIPILKSDRVILAGDHKQLPPTLFS 409
Query: 412 VEAEKKGLGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK 470
EK L TLFE+ A+ L ML QYRM + I ++ S + Y++++K+ G +
Sbjct: 410 ---EKNSLEFTLFEKAAERLETSGRVFMLDTQYRMKDEIASFPSMEFYSNRLKSGRPGPE 466
Query: 471 RTSSTEPT------LLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD 524
+ S+ T L ID AG D EE +DS N EA++ + L ++ +
Sbjct: 467 KISNFPKTFPFGDALQWIDTAGTDSEEVA-VDDSLTNPFEADLQVRLCTLLQENNWPEEE 525
Query: 525 IGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLS 584
I I++PY AQV LL + ++ L ++VST+D FQGRE I + VRSNS+ GFL
Sbjct: 526 ITILSPYRAQVRLLS-EKLQEAGLSKIQVSTIDSFQGRENRCIFLGFVRSNSEGRSGFLK 584
Query: 585 DRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
+ RR+NV +TRA+ + D+ T+ D FL R I + EE + + E+
Sbjct: 585 ESRRINVGMTRAKDLLLCIGDSSTLLEDPFLSRFIRFMEEKKFFRTAWEF 634
>gi|116331470|ref|YP_801188.1| DNA and RNA helicase subunit [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116125159|gb|ABJ76430.1| DNA and RNA helicase subunit [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 637
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 207/650 (31%), Positives = 339/650 (52%), Gaps = 39/650 (6%)
Query: 7 KEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQT 66
KE++ + S++E V A L + EK+ E SR+L K G + L +
Sbjct: 2 KERKFSSSIEELEFVRAEL-EREKKEEGFLFSKDWLSRSLQDRIKLGIALYPLVYEEQSF 60
Query: 67 GLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF 126
G G +L F+ + P+ KF +V + N+ + + ++ L I +A
Sbjct: 61 GRGGSWILTFRFPNQEEYPS-KFQPGALVQIGKNEDRV------RAILVSLHKERIRIAI 113
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPV----LFGEQKP- 181
+++PE + L+ L +E +Y+ M AL V + P + V L G KP
Sbjct: 114 EEVPEWIEDGKCFLDLLPDETSYKEMLYAL----DAVSSAPKGTRLYVNRELLLGYGKPD 169
Query: 182 --TVLKKDIA--FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV 237
+ K D + NS+L+ SQK+A+ + + S+++ ++HGPPGTGKTTT+ EII Q V
Sbjct: 170 PIAIRKSDETRILQRLNSSLNPSQKNAVLRCVLSEDIAVIHGPPGTGKTTTLTEIISQIV 229
Query: 238 KRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSL 297
K+L A ++ A D +VE + + ++RLG+PAR+ L + LD ++ + L
Sbjct: 230 AEEKKVLVSAPTHSACDLLVESISAKGISVLRLGYPARISDTALHTTLDYKLFHHSDGKL 289
Query: 298 ASDIRKEMKALNGKLLKT------KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNAD 351
++ R+++ ++ + K K+K R+ + +E++ L K R ++ + +I +
Sbjct: 290 LNEYRRDVIEISKQAKKYKRNFGEKEKEDRKNLFQEVKELKKTIRSMEKGLIDSLISSHS 349
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
V+++T + L+ FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S
Sbjct: 350 VIVSTPVASARSVLEGRRFDFCVLDESSQALEPATWIPILKSDRVILAGDHKQLPPTLFS 409
Query: 412 VEAEKKGLGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK 470
EK L TLFE+ A+ L ML QYRM + I ++ S + Y++++K+ G +
Sbjct: 410 ---EKNSLEFTLFEKAAERLETSGRVFMLDTQYRMKDEIASFPSMEFYSNRLKSGRPGPE 466
Query: 471 RTSSTEPT------LLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD 524
+ S+ T L ID AG D EE +DS N EA++ + L ++ +
Sbjct: 467 KISNFPKTFPFGDALQWIDTAGTDSEEVA-VDDSLTNPFEADLQVRLCTLLQENNWPEEE 525
Query: 525 IGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLS 584
I I++PY AQV LL + ++ L ++VST+D FQGRE I + VRSNS+ GFL
Sbjct: 526 ITILSPYRAQVRLLS-EKLQEAGLSKIQVSTIDSFQGRENRCIFLGFVRSNSEGRSGFLK 584
Query: 585 DRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
+ RR+NV +TRA+ + D+ T+ D FL R I + EE + + E+
Sbjct: 585 ESRRINVGMTRAKDLLLCIGDSSTLLEDPFLSRFIRFMEEKKFFRTAWEF 634
>gi|319903097|ref|YP_004162825.1| helicase [Bacteroides helcogenes P 36-108]
gi|319418128|gb|ADV45239.1| putative helicase [Bacteroides helcogenes P 36-108]
Length = 651
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 170/454 (37%), Positives = 264/454 (58%), Gaps = 38/454 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNI 256
L+ +Q+ A++K L +++V ++HGPPGTGKTTT+VE I + + R +++ CA SN AVD I
Sbjct: 190 LNATQESAVNKVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHREPQVMVCAQSNTAVDWI 249
Query: 257 VERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD---IRKEMKALNGKLL 313
E+LV V ++R+G+P R+ ++L + R ++ SL ++ IR+E++ L GK
Sbjct: 250 SEKLVDRGVNVLRIGNPTRVNDKMLSFTYER---RFESHSLYTELWSIRQELRQLQGKT- 305
Query: 314 KTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLV 373
+ + R ++ + L + ++ +A V+ +TL G+ R L F +
Sbjct: 306 RRGSYDEREGVRSRISRLRDRATALELQINAELFDSAHVIASTLVGSNHRLLSGHRFGTL 365
Query: 374 IIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGD 433
IDEAAQALE ACWIA+ K R ILAGDH QLPPTV+ EA + GL RTL E +A
Sbjct: 366 FIDEAAQALEAACWIAIRKADRVILAGDHCQLPPTVKCPEAARGGLERTLMETVAAAKPT 425
Query: 434 EVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK 492
V S+L +QYRMHE IM +SS+ YN ++KA P R + + ID + + +E+
Sbjct: 426 AV-SLLKMQYRMHEDIMRFSSEWFYNGELKAAPEVRHRGILDWDTPICWIDTSEMNFKEE 484
Query: 493 ----------KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
K+E + + E EA + KR+++ + D G+I+PY AQV L+
Sbjct: 485 FVGETFGRINKEEANLLLQELEAYILRIGGKRILEEQI---DFGLISPYKAQVQHLR--- 538
Query: 543 SKDDKLKN----------MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVA 592
+K+K + V+TVDGFQG+E++ I IS+VR+N ++GFL D RRMNVA
Sbjct: 539 ---NKIKTSAALRPYRSLLTVNTVDGFQGQERDVIFISLVRANEDGQIGFLHDLRRMNVA 595
Query: 593 VTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHA 626
+TRAR + ++ + +T++ F K+L+EY +E
Sbjct: 596 ITRARMKLVILGEADTLNRHAFYKKLMEYIKEQG 629
>gi|237832715|ref|XP_002365655.1| DNA-binding protein, putative [Toxoplasma gondii ME49]
gi|211963319|gb|EEA98514.1| DNA-binding protein, putative [Toxoplasma gondii ME49]
Length = 1320
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 253/861 (29%), Positives = 376/861 (43%), Gaps = 266/861 (30%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
SL V + L+ +E AE ++ + +L + +G + L ++GL +TL
Sbjct: 3 SLDRLVDLHRKLLQVEHAAETEELESALKTLSLTELEAQGVVLPRLVIHQVRSGLYSRTL 62
Query: 74 LEFQSTKGDVL-----------------------PAHKFGTHDVV-VLKPNKAD--LGSP 107
++F + + + P H+F D+V V + A GS
Sbjct: 63 VDFCTKRAAQVFQERQKKQSEPSEEAAAAAALLPPQHRFTPGDIVGVFEGPYAQQTAGSA 122
Query: 108 -ALGQGVVYRLKDSSITVAFDDIPEEGLNSPLR---------------------LEKLAN 145
AL GVV+++ ++VAF+ +E L P R L +++
Sbjct: 123 GALASGVVHKVHVQVLSVAFES--DEWLGRPERADGAAPGGKGRHEDESRGTFHLALISS 180
Query: 146 EVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK-------------------- 185
VT R AL +L NGPA LI + FG Q+P L
Sbjct: 181 SVTIDRQLRALERLKNYAPNGPAQTLINLCFGNQQPQPLSPGPHLAKEATVSREADLTVG 240
Query: 186 -----KDIA---------------------FKPFNSNLDHSQKDAISKALSSKNVFMLHG 219
DI+ F+ L SQK A+ L S+++ ++HG
Sbjct: 241 THREISDISDSSYCPSSVSSSSFLDLSGCGVSWFSPTLTESQKRAVLLGLRSRDLALIHG 300
Query: 220 PPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVER-----------------LVP 262
PPGTGK+T ++E++LQ RG+++LACA SN+AVDN++ER L
Sbjct: 301 PPGTGKSTALLELLLQLASRGARVLACAPSNVAVDNLLERVAAFANVNSNASLEASRLAG 360
Query: 263 HRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEM----------KALNGKL 312
R VRLGHPAR+ + L++QV R + ++L+ +IR E+ K L +
Sbjct: 361 RLRRCVRLGHPARVDENLSRFCLESQVQRSEGAALSREIRLELDRSLEMLRDRKKLE-RH 419
Query: 313 LKTKDKNTR--------------------------REIQKELRTLSKEERKRQQLAVTDV 346
++ + K TR RE+++E++TL +E R ++ AV +V
Sbjct: 420 MQRRQKETRGSGPTGLGESSALSSSTRASTWSQAKRELREEIQTLRRELRAFERRAVEEV 479
Query: 347 IKNADVVLTTLTGA--------------VSRKLDNTSFDLVIIDEAAQA----------- 381
++ + +V T G+ S K + FD+V+IDEAAQA
Sbjct: 480 LEQSPIVFATCVGSDNEALKQFFAPPGDASGKPGRSGFDVVVIDEAAQASLRLLPLFVLV 539
Query: 382 --LEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFER-LADLYGDEVTSM 438
LE CWI LL G R +LAGDH QLPPT++S +AE GLG TLFER + +G ++ +
Sbjct: 540 AALEAVCWIPLLYGHRAVLAGDHCQLPPTIKSRKAEDGGLGVTLFERQMHAQHGPRISQL 599
Query: 439 LTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR--------------------------- 471
L Q+RMH IM WS++Q Y+ ++A S R
Sbjct: 600 LDTQFRMHRKIMGWSNEQFYHGALRAADSVASRLLEAKYPRLKDETEHRGKRGEADLGQR 659
Query: 472 ----------------TSSTEPTLLLIDIAGCD-MEEKKDEEDSTM-------------- 500
+ P L ID AG +EE EED ++
Sbjct: 660 ADSSPGKRADGELETFATCVAPPFLWIDTAGVSWLEEDNQEEDHSLLRQASASSTALQLH 719
Query: 501 ----NEGEAEVAMAHAKRLIQS-GVHASDIGIITPYAAQVVLLK-ILRS----------- 543
N GEA + + + L+ + GV DI IITPY QV LL+ LR
Sbjct: 720 ASKSNRGEAALVVKRLQDLVWNFGVKPEDICIITPYRQQVQLLRQYLREAAEAAPALALG 779
Query: 544 ---------KDDKLK----NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
+ D L+ ++ V+TVDGFQGRE E + IS+VRSN K EVGFL D RR+N
Sbjct: 780 KKEGEARERETDSLRASFAHIPVNTVDGFQGREGEVVAISLVRSNRKHEVGFLKDVRRLN 839
Query: 591 VAVTRARRQCCLVCDTETVSS 611
VAVTRA+ +V D+ET+++
Sbjct: 840 VAVTRAKCHLLIVGDSETIAA 860
>gi|421099790|ref|ZP_15560434.1| type III restriction enzyme, res subunit [Leptospira borgpetersenii
str. 200901122]
gi|410797214|gb|EKR99329.1| type III restriction enzyme, res subunit [Leptospira borgpetersenii
str. 200901122]
Length = 637
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 204/647 (31%), Positives = 344/647 (53%), Gaps = 33/647 (5%)
Query: 7 KEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQT 66
KE++ + S++E V A L + EK+ E S SR+L K G T+ L +
Sbjct: 2 KERKFSSSIEELEFVRAEL-EREKKEEDSLFSKDWLSRSLQDRVKLGITLYPLVYEEQSL 60
Query: 67 GLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAF 126
G G ++ F+ + P+ KF V + N+ + + ++ L I VA
Sbjct: 61 GREGSWIITFRFPNQEEYPS-KFQPGAPVQIGKNEDRV------RTILVSLHREKIRVAV 113
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVL---FGEQKPTV 183
+++PE + L+ L +E +Y+ M AL Q++ G G + L +G+ P
Sbjct: 114 EEVPEWIEDGKCFLDLLPDETSYKEMFQALDQVT-GATKGTRLYINRELLLGYGKPDPIA 172
Query: 184 LKKDIA---FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG 240
++K + +S+L+ SQK+A+ + + S+++ ++HGPPGTGKTTT+ EI+ Q V G
Sbjct: 173 IRKSDETRILQRMDSSLNPSQKNAVLRCVFSEDIAVIHGPPGTGKTTTLTEIVSQLVVEG 232
Query: 241 SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
K+L A ++ A D +VE + + ++RLGHPAR+ VL S LD ++ + L ++
Sbjct: 233 KKVLVSAPTHSACDLLVESISAKGISVLRLGHPARISEAVLNSTLDYKLFHHSDGKLLNE 292
Query: 301 IRKEMKALNGKLLKT------KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVL 354
RK++ ++ + K K+K R+ + +E++ L K R ++ + ++ + V++
Sbjct: 293 YRKDVIEISKQAKKYKRNFGEKEKKERKNLFQEVKELKKMIRSMEKGLIDSLVSSHPVII 352
Query: 355 TTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA 414
+T + L+ +FD ++DE++Q LE A WI +LK R ILAGDH QLPP++ S
Sbjct: 353 STPVASARSVLEGRTFDFCVLDESSQGLEPAFWIPILKSDRVILAGDHKQLPPSLFS--- 409
Query: 415 EKKGLGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS 473
EK L TLFE+ A+ L +L QYRM + I + S + Y++++K+ +RTS
Sbjct: 410 EKNSLEFTLFEKAAERLETSGRVFLLDTQYRMKDEISFFPSMEFYSNRLKSGRPEPERTS 469
Query: 474 STEPTLLL------IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGI 527
+ T ID AG D EE +DS N EA++ + L ++ +I I
Sbjct: 470 NFPETFPFGNAFQWIDTAGTDSEEVA-VDDSLTNPFEADLQVRLCILLQENDWPEEEITI 528
Query: 528 ITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
++PY AQV L+ + + ++ L ++VST+D FQGRE I+ VRSN++ GFL + R
Sbjct: 529 LSPYRAQVRLV-LEKLQEAGLSKIQVSTIDSFQGRENRCILFGFVRSNAEGRSGFLKESR 587
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
R+NV +TRA+ + D+ T+ D FL RLI + E+ + + E+
Sbjct: 588 RINVGMTRAKDLLLCIGDSSTLLEDPFLSRLIRFAEDKEVFRTAWEF 634
>gi|298385061|ref|ZP_06994620.1| DNA helicase [Bacteroides sp. 1_1_14]
gi|298262205|gb|EFI05070.1| DNA helicase [Bacteroides sp. 1_1_14]
Length = 651
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 175/495 (35%), Positives = 273/495 (55%), Gaps = 24/495 (4%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + N A L L G QKP + P+ L+ +Q+ A
Sbjct: 162 DETSYRAMFEALEDTIRAKGNR-LAELRDTLLGTQKPGFRELYPVRFPW---LNSTQETA 217
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 218 VNKVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWICEKLVDRG 277
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L + + + IRK ++ + G ++ + R +
Sbjct: 278 VPVLRIGNPTRVNDKMLSFTYERRFENHPSYPELWGIRKSIREM-GSRMRRGSYSEREGM 336
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
+ + L + + L D+ +A V+ +TL + R L+ F + IDEAAQALE
Sbjct: 337 RSRMSRLRDRATELEILINADLFDSARVIASTLVSSNHRLLNGRRFPTLFIDEAAQALEA 396
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R ILAGDH QLPPT++ +EA + GL TL E++ V S+L VQYR
Sbjct: 397 ACWIAIRKADRVILAGDHCQLPPTIKCIEAARGGLDHTLMEKVVQQKPSAV-SLLKVQYR 455
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK----------K 493
MHE IM + S+ YN +++A P R + + ID + D E+ K
Sbjct: 456 MHEAIMRFPSEWFYNGELEAAPEVRNRGILDFDTPMNWIDTSEMDFHEEFVGESFGRINK 515
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNME- 552
E + + E EA ++ R++ + D G+I+PY AQV L+ L+
Sbjct: 516 QEANLLLQELEAYISRIGKARILDESI---DFGLISPYKAQVQYLRSKIRGSSFLRPFRS 572
Query: 553 ---VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
V+TVDGFQG+E++ + IS+VR+N ++GFL+D RRMNVA+TRAR + ++ D T+
Sbjct: 573 LITVNTVDGFQGQERDVVFISLVRANEDGQIGFLNDLRRMNVAITRARMKLVILGDATTL 632
Query: 610 SSDGFLKRLIEYFEE 624
+ F ++LI Y ++
Sbjct: 633 TKHAFYRKLITYIKQ 647
>gi|421132406|ref|ZP_15592574.1| AAA domain protein [Leptospira kirschneri str. 2008720114]
gi|410356171|gb|EKP03528.1| AAA domain protein [Leptospira kirschneri str. 2008720114]
Length = 631
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 208/640 (32%), Positives = 333/640 (52%), Gaps = 34/640 (5%)
Query: 12 AVSLQEFVSVMAPLIDLEKEAEISASITS--GASRNLDTAQKKGSTILNLKCVDAQTGLM 69
++S EFV +LE+E + SI S SR + ++G T+ + + G
Sbjct: 9 SISELEFVRT-----ELEREKKEEDSIFSKDWLSRPIPDRIRQGITLYPIVYEEQTLGRE 63
Query: 70 GKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDI 129
G L F+ + + P KF T V L N+ + + ++ L I ++ +++
Sbjct: 64 GSWTLTFRFSNQEEYPI-KFQTGAPVQLGKNEDRI------RAILVSLHKEKIKISIEEV 116
Query: 130 PEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK---- 185
PE L+ L +E +Y+ M AL L + +L G KP ++
Sbjct: 117 PEWAEEGKCFLDLLPDETSYKEMFHALDVLGSATKGTRLYVNRELLLGYVKPDLISIRDS 176
Query: 186 -KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKIL 244
+ ++ L+ SQK+A+ ++ S++V ++HGPPGTGKTTT+ EI+ Q V KIL
Sbjct: 177 DRSRILGRISTFLNESQKNAVVHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLVAEEKKIL 236
Query: 245 ACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKE 304
A +N A D +VE + + ++RLGHPAR+ + S LD ++ + L ++ RK+
Sbjct: 237 VSAPTNSACDLLVESISARGISVLRLGHPARVNEIAIHSTLDYKLFHHPDGKLLNEYRKD 296
Query: 305 MKALN--GKLLK----TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLT 358
+ ++ K LK K++ R+ + E++ L K R + + ++ + V+++T
Sbjct: 297 VIEISKQAKKLKRNFGEKEREERKNLFMEVKELKKTIRSMEIGLIDSLVSSHPVIVSTPV 356
Query: 359 GAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKG 418
+ L+N +FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S EK
Sbjct: 357 ASARDILENRTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS---EKNS 413
Query: 419 LGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEP 477
L TLFE+ A+ L +L QYRM E I+++ SK+ Y+ +K+ ++ T P
Sbjct: 414 LETTLFEKAAERLESHGRVFLLDTQYRMKEEIVSFPSKEFYSDILKSGRPEKEKIPETFP 473
Query: 478 TL---LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ 534
L ID AG D EE +DS N EA++ + L ++ +I I++PY AQ
Sbjct: 474 FLNAFQWIDTAGTDSEEVII-DDSISNPFEADLQVRLCFLLKENDWPEEEITILSPYRAQ 532
Query: 535 VVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
V L+ + KD L + VST+D FQGRE I++ VRSNS+ GFL + RR+NV +T
Sbjct: 533 VRLIS-EKLKDVGLTKINVSTIDSFQGRENRCILLGFVRSNSEGRSGFLKESRRINVGMT 591
Query: 595 RARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
RAR + D+ T+S D FL +LI + EE + + E+
Sbjct: 592 RARDLLLCIGDSSTLSQDPFLCKLIRFAEEKEVFRTAWEF 631
>gi|317475492|ref|ZP_07934755.1| hypothetical protein HMPREF1016_01737 [Bacteroides eggerthii
1_2_48FAA]
gi|316908323|gb|EFV30014.1| hypothetical protein HMPREF1016_01737 [Bacteroides eggerthii
1_2_48FAA]
Length = 633
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 180/495 (36%), Positives = 278/495 (56%), Gaps = 30/495 (6%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + + N A L L G K + P+ L+ +Q+ A
Sbjct: 143 DETSYRTMFEALEDVLRAKGN-RLAELRDTLLGTMKAGFRELYPVRFPW---LNSTQETA 198
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN+AVD I E+LV
Sbjct: 199 VNKVLCARDVAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNMAVDWISEKLVDRG 258
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD---IRKEMKALNGKLLKTKDKNTR 321
V ++R+G+P R+ ++L + R +N L + IRKE++ L G+ + + R
Sbjct: 259 VNVLRIGNPTRVNDKMLSFTYER---RFENHPLYPELWSIRKELRQLGGRA-RRGSYDER 314
Query: 322 REIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQA 381
I+ + L + T++ +A V+ +TL + R L+ F + IDEAAQA
Sbjct: 315 EGIRSRMSRLRDRATALEVQINTELFDSAHVIASTLVSSNHRLLNGRHFGTLFIDEAAQA 374
Query: 382 LEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTV 441
LE ACWIA+ K R +LAGDH QLPPT++ EA + GL RTL E++A V S+L V
Sbjct: 375 LEAACWIAIRKADRVVLAGDHCQLPPTIKCYEAARGGLERTLMEKVAASKPSAV-SLLKV 433
Query: 442 QYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK-------- 492
QYRMHE IM +SS Y+ +++A P R + + ID + D +E+
Sbjct: 434 QYRMHEDIMRFSSNWFYDGELEAAPEIRHRGILDWDTPVTWIDTSDMDFKEEFVGETFGR 493
Query: 493 --KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN 550
K+E + E EA + R+++ + D G+I+PY AQV L+ L+
Sbjct: 494 INKEEAHLLLKELEAYILRIGGSRILEERI---DFGLISPYKAQVQYLRGKIKGSATLRP 550
Query: 551 ----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 606
+ V+TVDGFQG+E++ I IS+VR+N + ++GFL+D RRMNVA+TRAR + ++ +
Sbjct: 551 YRSLITVNTVDGFQGQERDVIFISLVRANEEGQIGFLNDLRRMNVAITRARMKLVILGEA 610
Query: 607 ETVSSDGFLKRLIEY 621
T+ F K+L+EY
Sbjct: 611 ATLGHHAFYKQLLEY 625
>gi|270295956|ref|ZP_06202156.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273360|gb|EFA19222.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 637
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 179/497 (36%), Positives = 278/497 (55%), Gaps = 30/497 (6%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + N A L +L G K + P+ L+ +Q+ A
Sbjct: 148 DETSYRTMFEALEDTLRSKGN-RLAELRDILLGTSKAGFRELYPVRFPW---LNSTQETA 203
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 204 VNKVLCARDVAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWISEKLVDRG 263
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD---IRKEMKALNGKLLKTKDKNTR 321
V ++R+G+P R+ ++L + R +N L + IRK ++ L G + + R
Sbjct: 264 VNVLRIGNPTRVNDKMLSFTYER---RFENHPLYPELWSIRKNLREL-GSRARRGSYDER 319
Query: 322 REIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQA 381
++ + L + +++ A V+ +TL + R L+ F + IDEAAQA
Sbjct: 320 EGVRSRMSRLRDRATALEIQINSELFDGAHVIASTLVSSNHRLLNGRRFGTLFIDEAAQA 379
Query: 382 LEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTV 441
LE ACWIA+ K R +LAGDH QLPPT++ EA + GL RTL E++ V S+L V
Sbjct: 380 LEAACWIAIRKADRVVLAGDHCQLPPTIKCYEAARGGLERTLMEKVVS-NKPAVVSLLKV 438
Query: 442 QYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDM-EEKKDEEDST 499
QYRMHE IM + S+ YN +++A P R + + ID + D EE E
Sbjct: 439 QYRMHEEIMKFPSQWFYNGELEAAPEVRYRGILDWDTPIHWIDTSEMDFKEEFVGETFGR 498
Query: 500 MNEGEAEVAMAHAK---------RLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN 550
+N+ EA++ ++ K R+++ + D GII+PY AQV L+ D LK
Sbjct: 499 INKAEADLLLSELKIYINRISGNRILEEKI---DFGIISPYKAQVQYLRNKIKADASLKP 555
Query: 551 ----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 606
V+TVDGFQG+E++ I IS+VR+N + ++GFL+D RRMNVA+TRAR + ++ +
Sbjct: 556 YRSLFTVNTVDGFQGQERDVIFISLVRANEEGQIGFLNDLRRMNVAITRARMKLVIMGEA 615
Query: 607 ETVSSDGFLKRLIEYFE 623
+T+ GF ++L+E+ +
Sbjct: 616 DTLKHHGFYRKLLEFIQ 632
>gi|218128722|ref|ZP_03457526.1| hypothetical protein BACEGG_00293 [Bacteroides eggerthii DSM 20697]
gi|217989177|gb|EEC55492.1| putative DNA helicase [Bacteroides eggerthii DSM 20697]
Length = 636
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 181/501 (36%), Positives = 278/501 (55%), Gaps = 42/501 (8%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAA------GLIPVLFGEQKPTVLKKDIAFKPFNSNLD 198
+E +YR M + L + + N A G + V F E P + F NS
Sbjct: 146 DETSYRTMFETLEDVLRAKGNRLAELRDTLLGTMKVGFRELYP------VRFPWLNS--- 196
Query: 199 HSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVE 258
+Q+ A++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN+AVD I E
Sbjct: 197 -TQETAVNKVLCARDVAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNMAVDWISE 255
Query: 259 RLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD---IRKEMKALNGKLLKT 315
+LV V ++R+G+P R+ ++L + R +N L + IRKE++ L G+ +
Sbjct: 256 KLVDRGVNVLRIGNPTRVNDKMLSFTYER---RFENHPLYPELWSIRKELRQLGGRA-RR 311
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVII 375
+ R I+ + L + T++ +A V+ +TL + R L+ F + I
Sbjct: 312 GSYDEREGIRSRMSRLRDRATALEVQINTELFDSAHVIASTLVSSNHRLLNGRRFGTLFI 371
Query: 376 DEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEV 435
DEAAQALE ACWIA+ K R +LAGDH QLPPT++ EA + GL RTL E++A V
Sbjct: 372 DEAAQALEAACWIAIRKADRVVLAGDHCQLPPTIKCYEAARGGLERTLMEKVAANKPSAV 431
Query: 436 TSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK-- 492
S+L VQYRMHE IM +SS Y+ +++A P R + + ID + D +E+
Sbjct: 432 -SLLKVQYRMHEDIMRFSSNWFYDGELEAAPEIRHRGILDWDTPVTWIDTSDMDFKEEFV 490
Query: 493 --------KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSK 544
K+E + E EA + R+++ + D G+I+PY AQV L+
Sbjct: 491 GETFGRINKEEAHLLLKELEAYILRIGGSRILEERI---DFGLISPYKAQVQYLRGKIKG 547
Query: 545 DDKLKN----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
L+ + V+TVDGFQG+E++ I IS+VR+N + ++GFL+D RRMNVA+TRAR +
Sbjct: 548 SATLRPYRSLITVNTVDGFQGQERDVIFISLVRANEEGQIGFLNDLRRMNVAITRARMKL 607
Query: 601 CLVCDTETVSSDGFLKRLIEY 621
++ + T+ F K+L+EY
Sbjct: 608 VILGEAATLGHHAFYKQLLEY 628
>gi|418696259|ref|ZP_13257268.1| AAA domain protein [Leptospira kirschneri str. H1]
gi|421107423|ref|ZP_15567975.1| AAA domain protein [Leptospira kirschneri str. H2]
gi|409955788|gb|EKO14720.1| AAA domain protein [Leptospira kirschneri str. H1]
gi|410007439|gb|EKO61149.1| AAA domain protein [Leptospira kirschneri str. H2]
Length = 631
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 204/647 (31%), Positives = 334/647 (51%), Gaps = 34/647 (5%)
Query: 5 KTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITS--GASRNLDTAQKKGSTILNLKCV 62
K + ++S EFV +LE+E + SI S SR + ++G T+ +
Sbjct: 2 KDRNFPDSISELEFVRT-----ELEREKKEEDSIFSKDWLSRPIPDRIRQGITLYPIVYE 56
Query: 63 DAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSI 122
+ G G L F+ + + P KF T V L N+ + + ++ L I
Sbjct: 57 EQTLGREGSWTLTFRFSNQEEYPI-KFQTGAPVQLGKNEDRI------RAILVSLHKEKI 109
Query: 123 TVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPT 182
++ +++PE L+ L +E++Y+ M AL L + +L G KP
Sbjct: 110 KISIEEVPEWAEEGKCFLDLLPDEISYKEMFHALDVLGSATKGTRLYVNRELLLGYVKPD 169
Query: 183 VLK-----KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV 237
++ + ++ L+ SQK+A+ ++ S++V ++HGPPGTGKTTT+ EI+ Q V
Sbjct: 170 LISIRDSDRSRILGRISTFLNESQKNAVVHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLV 229
Query: 238 KRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSL 297
KIL A +N A D +VE ++ + ++RLGHPAR+ + S LD ++ + L
Sbjct: 230 AEEKKILVSAPTNSACDLLVESILARGISVLRLGHPARVNEIAIHSTLDYKLFHHPDGKL 289
Query: 298 ASDIRKEMKALNGKLLK------TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNAD 351
++ RK++ ++ + K K++ R+ + E++ L K R + + ++ +
Sbjct: 290 LNEYRKDVIEISKQAKKFKRNFGEKEREERKNLFMEVKELKKTIRSMEIGLIDSLVSSHP 349
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
V+++T + L+N +FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S
Sbjct: 350 VIVSTPVASARGILENRTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS 409
Query: 412 VEAEKKGLGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK 470
EK L TLFE+ A+ L +L QYRM E I+++ SK+ Y+ +K+ +
Sbjct: 410 ---EKNSLETTLFEKAAERLESHGRVFLLDTQYRMKEEIVSFPSKEFYSDILKSGRPEKE 466
Query: 471 RTSSTEP---TLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGI 527
R T P ID +G D EE +DS N EA++ + L ++ +I I
Sbjct: 467 RIPETFPFSNAFQWIDTSGTDSEEVI-LDDSISNPFEADLQVRLCFLLKENDWPEDEITI 525
Query: 528 ITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
++PY AQV L+ + +D L + VST+D FQGRE I++ VRSN + GFL + R
Sbjct: 526 LSPYRAQVRLIS-EKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGRSGFLKESR 584
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
R+NV +TRAR + D+ T+S D FL +LI + EE + + E+
Sbjct: 585 RINVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEKEVFRTAWEF 631
>gi|380696742|ref|ZP_09861601.1| helicase [Bacteroides faecis MAJ27]
Length = 652
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 175/495 (35%), Positives = 272/495 (54%), Gaps = 24/495 (4%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + N A L L G QKP + P+ L+ +Q+ A
Sbjct: 162 DETSYRAMFEALEDTIRAKGNR-LADLRDTLLGTQKPGFRELYPVRFPW---LNSTQETA 217
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+L
Sbjct: 218 VNKVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWICEKLADRG 277
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L S + + IRK ++ + G ++ + R +
Sbjct: 278 VAVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGIRKSIREM-GSRMRRGSYSEREGM 336
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
+ + L + + L D+ +A V+ +TL + R L+ F + IDEAAQALE
Sbjct: 337 RSRMSRLRDRATELEILINADLFDSARVIASTLVSSNHRLLNGRRFPTLFIDEAAQALEA 396
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R ILAGDH QLPPT++ +EA + GL TL E++ V S+L VQYR
Sbjct: 397 ACWIAIRKADRVILAGDHCQLPPTIKCIEAARGGLDHTLMEKVVQQKPSAV-SLLKVQYR 455
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK----------K 493
MHE IM + S+ YN +++A P R + + ID + D E+ K
Sbjct: 456 MHEAIMRFPSEWFYNGELEAAPEVRNRGILDFDTPMNWIDTSEMDFHEEFVGESFGRINK 515
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNME- 552
E + + E EA + R++ + D G+I+PY AQV L+ + L+
Sbjct: 516 QEANLLLQELEAYINRIGKTRILDERI---DFGLISPYKAQVQYLRSKIRGNSFLRPFRS 572
Query: 553 ---VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
V+TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR + ++ D T+
Sbjct: 573 LITVNTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLVILGDATTL 632
Query: 610 SSDGFLKRLIEYFEE 624
+ F ++L++Y +
Sbjct: 633 AQHPFYRKLMQYIRQ 647
>gi|237708745|ref|ZP_04539226.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|423228836|ref|ZP_17215242.1| hypothetical protein HMPREF1063_01062 [Bacteroides dorei
CL02T00C15]
gi|423247648|ref|ZP_17228696.1| hypothetical protein HMPREF1064_04902 [Bacteroides dorei
CL02T12C06]
gi|229457171|gb|EEO62892.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|392631541|gb|EIY25512.1| hypothetical protein HMPREF1064_04902 [Bacteroides dorei
CL02T12C06]
gi|392635575|gb|EIY29474.1| hypothetical protein HMPREF1063_01062 [Bacteroides dorei
CL02T00C15]
Length = 630
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 174/492 (35%), Positives = 278/492 (56%), Gaps = 26/492 (5%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL Q+ K N A L + G K P+ L++SQ++A
Sbjct: 144 DETSYRLMFEALSQVIKAKDNR-LAELRDIFHGTLKAQTFSFGFTRFPW---LNNSQEEA 199
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K + +K+V ++HGPPGTGKTTT+VE I + + R ++++ CA SN+AVD I E+LV
Sbjct: 200 VNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNMAVDWISEKLVDRG 259
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L + + + IRK ++ L + K ++ R
Sbjct: 260 VPVLRIGNPTRVNDKMLSFTYERRFESHPDYPQLWSIRKAIRELYSRSRKGAERENIRLK 319
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
L+ + E R A + A V+ TL + +R L F + IDEAAQALE
Sbjct: 320 INSLKDRATELEIRINEA---LFSEARVIACTLVSSANRVLTGRRFGTLFIDEAAQALEP 376
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R +LAGDH QLPPT++ VEA + GL +TL + + E S+L VQYR
Sbjct: 377 ACWIAIRKADRIVLAGDHCQLPPTIKCVEAARGGLDQTLMQEIVQ-NKPETVSLLKVQYR 435
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDM-EEKKDEEDSTMNE 502
M++ IM++SS+ Y ++K+ P R + + ++ G + EE E +N+
Sbjct: 436 MNDEIMHFSSEWFYQGELKSAPEVKYRGILDYDTPIEWVNTEGMNYNEEFVGESFGRINK 495
Query: 503 GEAEVAMAH---------AKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN--- 550
EA ++++ +R ++ + D+G+I+PY AQV L+ L +D K
Sbjct: 496 AEAALSISQLTHYINKIGKERFLEERI---DVGLISPYKAQVQYLRQLIKRDAFFKPYRH 552
Query: 551 -MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
+ ++TVDGFQG+E++ I+IS+VR+N ++GFL+D RRMNVA+TRAR + ++ D T+
Sbjct: 553 LITINTVDGFQGQERDVILISLVRANEDGQIGFLNDLRRMNVAITRARMKLIILGDASTL 612
Query: 610 SSDGFLKRLIEY 621
+ F K+L EY
Sbjct: 613 TKHPFYKKLYEY 624
>gi|423278771|ref|ZP_17257685.1| hypothetical protein HMPREF1203_01902 [Bacteroides fragilis HMW
610]
gi|404585763|gb|EKA90367.1| hypothetical protein HMPREF1203_01902 [Bacteroides fragilis HMW
610]
Length = 656
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 175/493 (35%), Positives = 277/493 (56%), Gaps = 26/493 (5%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK-PFNSNLDHSQKD 203
+E +YR M +AL + + N A L +L +Q P+ ++ + P+ L+ +Q++
Sbjct: 166 DETSYRSMFEALEDVIRAKGNR-LAQLRDILLSKQ-PSQWREIYPVRFPW---LNTTQEE 220
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A++K L +K+V ++HGPPGTGKTTT+VE + + + R +++L CA SN AVD I E+LV
Sbjct: 221 AVNKVLRAKDVAIVHGPPGTGKTTTLVEAVYETLHRENQVLVCAQSNTAVDWIAEKLVDR 280
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
V ++R+G+P+R+ ++L + + + IRK ++ + G L+ + R
Sbjct: 281 GVPVLRIGNPSRVNDKMLSFTYERRFESHPAYTELWGIRKSIRDM-GNHLRKGGYSERES 339
Query: 324 IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALE 383
+ + L + + + L D+ +A V+ +TL + R L F + IDEAAQALE
Sbjct: 340 TRNRILRLKERATELEILINEDLFSSARVIASTLVSSNHRILTGRHFSTLFIDEAAQALE 399
Query: 384 IACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQY 443
ACWIA+ K R ILAGDH QLPPT++ +EA + GL RTL E++ + E S+L +QY
Sbjct: 400 AACWIAIRKADRVILAGDHCQLPPTIKCMEAARSGLDRTLMEKVV-MNKQEAVSLLKIQY 458
Query: 444 RMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDM-EEKKDEEDSTMN 501
RMH IM + S Y +++A P R + + ID + D EE E +N
Sbjct: 459 RMHRSIMQFPSAWFYQGELEAAPEISHRGILELDTPINWIDTSEMDFHEEFVGESFGRIN 518
Query: 502 EGEAEVAMAHAKRLIQS------GVHASDIGIITPYAAQVVLLK-------ILRSKDDKL 548
+ EA + + + I+ D G+I+PY AQV L+ R +++
Sbjct: 519 KPEANLLLQELENYIRKIGENRVAEECIDFGLISPYKAQVQYLRNKIKGNPFFRPYRNRI 578
Query: 549 KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTET 608
V+TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR + ++ D T
Sbjct: 579 T---VNTVDGFQGQERDVIFISLVRANENGQIGFLNDLRRMNVAITRARMKLVILGDATT 635
Query: 609 VSSDGFLKRLIEY 621
+S F ++LIEY
Sbjct: 636 MSKHAFYRKLIEY 648
>gi|357060587|ref|ZP_09121355.1| hypothetical protein HMPREF9332_00912 [Alloprevotella rava F0323]
gi|355375892|gb|EHG23160.1| hypothetical protein HMPREF9332_00912 [Alloprevotella rava F0323]
Length = 640
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 167/446 (37%), Positives = 268/446 (60%), Gaps = 30/446 (6%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNI 256
L+ SQ+ A++ L+++++ ++HGPPGTGKTTT+VE I++ ++R +++ CA SN+AVD I
Sbjct: 182 LNASQEQAVNDVLAARDLMIVHGPPGTGKTTTLVEAIMEVMRREPQVMVCAQSNMAVDWI 241
Query: 257 VERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK 316
E+L V ++R+G+P+R+ ++L + + + S IR+ ++ L K +
Sbjct: 242 SEQLADRGVSVLRIGNPSRVTDKMLSFTYERRFESHPDYSTLWSIRRTIRQLYATPRKGR 301
Query: 317 DKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIID 376
++ ++I + LR + E R + A+ D + VV TL G+ ++ L F + ID
Sbjct: 302 SESFHQKITR-LRERADELELRIRNALFD---QSRVVACTLVGSANQLLQGIHFHTLFID 357
Query: 377 EAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT 436
EAAQALE ACWIAL K R +LAGDH QLPPT++S A GL +TL E LA+ + E
Sbjct: 358 EAAQALEPACWIALRKCDRFVLAGDHCQLPPTIKSNAARYGGLDKTLMETLAETH-PEAV 416
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR--TSSTEPTLLLIDIAGCDMEEKKD 494
+LTVQYRM+E +M +SS+ Y K++A P R + + L+ +D AG D E ++D
Sbjct: 417 RLLTVQYRMNEALMRFSSEWFYEGKLQAAPEVSHRGIMADMDEPLVWVDTAGEDSEGQED 476
Query: 495 EEDS-------TMNEGEAEVAMAH---------AKRLIQSGVHASDIGIITPYAAQVVLL 538
+ +N+ EA + +A +RL++ + DIGII+PY AQV L
Sbjct: 477 FHEQFIGASYGRINKAEARLTLATLIDYTERIGRQRLLEERI---DIGIISPYKAQVQYL 533
Query: 539 KILRSKDDKL----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
+ L K+ L K++ ++TVD FQG+E++ I++S+VR+N E+GFL+D RRMNVA+T
Sbjct: 534 RALLKKNAYLRPLRKSITINTVDAFQGQERDVILVSLVRANETGEIGFLNDLRRMNVAIT 593
Query: 595 RARRQCCLVCDTETVSSDGFLKRLIE 620
RAR + ++ + T+ F K+L +
Sbjct: 594 RARMKLIILGASTTLCRHKFYKKLYD 619
>gi|265755988|ref|ZP_06090455.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|423242331|ref|ZP_17223440.1| hypothetical protein HMPREF1065_04063 [Bacteroides dorei
CL03T12C01]
gi|263234066|gb|EEZ19667.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|392639617|gb|EIY33433.1| hypothetical protein HMPREF1065_04063 [Bacteroides dorei
CL03T12C01]
Length = 630
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 174/492 (35%), Positives = 278/492 (56%), Gaps = 26/492 (5%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL Q+ K N A L + G K P+ L++SQ++A
Sbjct: 144 DETSYRLMFEALSQVIKAKDNR-LAELRDIFHGTLKAQTFSFGFTRFPW---LNNSQEEA 199
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K + +K+V ++HGPPGTGKTTT+VE I + + R ++++ CA SN+AVD I E+LV
Sbjct: 200 VNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNMAVDWISEKLVDRG 259
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L + + + IRK ++ L + K ++ R
Sbjct: 260 VPVLRIGNPTRVNDKMLSFTYERRFESHPDYPQLWSIRKAIRELYSRSRKGAERENIRLK 319
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
L+ + E R A + A V+ TL + +R L F + IDEAAQALE
Sbjct: 320 INSLKDRATELEIRINEA---LFSEARVIACTLVSSANRVLTGRRFGTLFIDEAAQALEP 376
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R +LAGDH QLPPT++ VEA + GL +TL + + E S+L VQYR
Sbjct: 377 ACWIAIRKADRIVLAGDHCQLPPTIKCVEAARGGLDQTLMQEIVQ-NKPETVSLLKVQYR 435
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDM-EEKKDEEDSTMNE 502
M++ IM++SS+ Y ++K+ P R + + ++ G + EE E +N+
Sbjct: 436 MNDEIMHFSSEWFYQGELKSAPEVKYRGILDYDTPIEWVNTEGMNCNEEFVGESFGRINK 495
Query: 503 GEAEVAMAH---------AKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN--- 550
EA ++++ +R ++ + D+G+I+PY AQV L+ L +D K
Sbjct: 496 AEAALSISQLTHYINKIGKERFLEERI---DVGLISPYKAQVQYLRQLIKRDAFFKPYRH 552
Query: 551 -MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
+ ++TVDGFQG+E++ I+IS+VR+N ++GFL+D RRMNVA+TRAR + ++ D T+
Sbjct: 553 LITINTVDGFQGQERDVILISLVRANEDGQIGFLNDLRRMNVAITRARMKLIILGDASTL 612
Query: 610 SSDGFLKRLIEY 621
+ F K+L EY
Sbjct: 613 TKHPFYKKLYEY 624
>gi|383810355|ref|ZP_09965851.1| AAA domain / AAA domain multi-domain protein [Prevotella sp. oral
taxon 306 str. F0472]
gi|383357100|gb|EID34588.1| AAA domain / AAA domain multi-domain protein [Prevotella sp. oral
taxon 306 str. F0472]
Length = 646
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 181/511 (35%), Positives = 290/511 (56%), Gaps = 45/511 (8%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN-SNLDHSQKD 203
+E +Y+ M DAL + K N A L + + QK +F P L+ +Q+
Sbjct: 148 DETSYQMMFDALERAMKAKGN-RLAYLRDLFYSRQKVG----KFSFAPIRLPWLNPTQEK 202
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A+++ L +K+V ++HGPPGTGKTTT+VE I + + R S++L CA SN+AVD I E+LV
Sbjct: 203 AVNEVLWAKDVAIVHGPPGTGKTTTMVEAINETLMRESQVLVCAQSNMAVDWISEKLVDR 262
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
+ ++R+G+P R+ ++L + + + IRK ++ L K +N ++
Sbjct: 263 GINVLRIGNPTRVNDKMLGFTYERKFEAHPDYPQLWSIRKAIRELRNHR-KRSSENYHQK 321
Query: 324 IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALE 383
+++ L++ + E R +++ A V+ +TL GA SR ++ F + IDEAAQALE
Sbjct: 322 MER-LKSRATELEIRIN---SELFGEARVIASTLVGANSRVMEGQKFTTLFIDEAAQALE 377
Query: 384 IACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQY 443
ACWI + + SR I AGDH QLPPTV+S+ A GLG+TL ER+ + EV ++L VQY
Sbjct: 378 AACWIPIRRASRVIFAGDHCQLPPTVKSLAALHAGLGKTLMERVVE-NKPEVVTLLKVQY 436
Query: 444 RMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEKKD---EEDST 499
RM+E IM +SS Y ++++ P R + ++ ID + +E + + ED +
Sbjct: 437 RMNEEIMRFSSNWFYGGQVESAPQIKYRGILDYDNPMVWIDTSDSSLENQSEGGQNEDKS 496
Query: 500 -------------MNEGEAEVAMAH---------AKRLIQSGVHASDIGIITPYAAQVVL 537
+N+GEAE+ + +R++ + D+G+I+PY AQV
Sbjct: 497 IFKEQFVGESFGRINKGEAELTLQTLQSYFTKIGKQRILDERI---DVGVISPYRAQVQF 553
Query: 538 LKILRSKDDKLKN----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAV 593
L+ L K + K + V+TVDGFQG+E++ I+IS+VRSN ++GFL D RRMNVA+
Sbjct: 554 LRGLIKKREFFKPYRSLISVNTVDGFQGQERDVILISLVRSNDAGQIGFLRDLRRMNVAI 613
Query: 594 TRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
TRAR + ++ + +T++ F K+L E E+
Sbjct: 614 TRARMKLIILGNIQTMTQHPFYKKLWESIEQ 644
>gi|237720100|ref|ZP_04550581.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229450652|gb|EEO56443.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 649
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 176/492 (35%), Positives = 271/492 (55%), Gaps = 24/492 (4%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + N A L +L G QKP + P+ L+ +Q+ A
Sbjct: 162 DETSYRAMFEALEDTIRAKDNR-LAELRDILLGTQKPGFRELYPVRFPW---LNSTQETA 217
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 218 VNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWICEKLVDRG 277
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L S + + IRK ++ + G ++ + R +
Sbjct: 278 VPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGIRKSIREM-GSRMRRGSYSEREGM 336
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
+ + L + + D+ +A V+ +TL + R L+ F + IDEAAQALE
Sbjct: 337 RNRMSRLRDRATELEIQINADLFDSARVIASTLVSSNHRLLNGRRFSTLFIDEAAQALEA 396
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R ILAGDH QLPPT++ +EA + GL TL E++ L V S+L VQYR
Sbjct: 397 ACWIAIRKADRVILAGDHCQLPPTIKCIEAARGGLDHTLMEKVVQLKPSAV-SLLKVQYR 455
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEE----------KK 493
MHE IM + S Y+ +++A P R + + ID + D E K
Sbjct: 456 MHEAIMQFPSDWFYHGELEAAPEVRYRGILDFDTPMNWIDTSEMDFHEDFVGESFGRINK 515
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNME- 552
E + + E EA + +R++ + D G+I+PY AQV L+ + L+
Sbjct: 516 QEANLLLQELEAYIERIGKERILDERI---DFGLISPYKAQVQYLRGKIKGNSFLRPFRS 572
Query: 553 ---VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
V+TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR + ++ D T+
Sbjct: 573 LITVNTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLVILGDASTL 632
Query: 610 SSDGFLKRLIEY 621
+ F KRL+ +
Sbjct: 633 TKHPFYKRLMLF 644
>gi|315607147|ref|ZP_07882151.1| helicase [Prevotella buccae ATCC 33574]
gi|315251201|gb|EFU31186.1| helicase [Prevotella buccae ATCC 33574]
Length = 634
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 192/581 (33%), Positives = 311/581 (53%), Gaps = 54/581 (9%)
Query: 69 MGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDD 128
G+ ++ F+S KGD H F V S G +V + DS+
Sbjct: 79 FGRPVMFFRSAKGDD-KLHYFNFTGTV----------SYVDGDRMVVAVPDSAPLADLQA 127
Query: 129 IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDI 188
+ EE L ++ +E +Y+ M DAL ++ +N A L + + QK
Sbjct: 128 VGEE-----LGVQLSFDETSYKTMFDALDRVIHA-KNNRLAYLRDLFYSSQKAARFTFAP 181
Query: 189 AFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAA 248
P+ L+ +Q+ A+++ + +K+V ++HGPPGTGKTTT+VE I + + R S+++ CA
Sbjct: 182 TRFPW---LNPTQEQAVNEVMRAKDVAIVHGPPGTGKTTTLVEAINETLMRESQVMVCAQ 238
Query: 249 SNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKAL 308
SN+AVD I E+L + ++R+G+P+R+ ++L + + + IRK ++ L
Sbjct: 239 SNMAVDWICEKLTDRGINVLRIGNPSRVNDKMLSFTYERRFESHPDYPQLWAIRKTIREL 298
Query: 309 NGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNT 368
+++ + + ++L L + + +++ A V+ +TL G+ R LD
Sbjct: 299 -----RSRRRRGSGDYHQKLERLKSRAAEIEIRINSELFGEARVIASTLVGSAHRLLDGQ 353
Query: 369 SFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
+ + IDEAAQALE ACWI + K SR +LAGDH QLPPTV+S+ A + GLG+TL ER+
Sbjct: 354 KYATLFIDEAAQALEAACWIPIRKASRVVLAGDHCQLPPTVKSIAALRAGLGKTLMERIV 413
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----GV--------KRTSSTE 476
+ EV ++L VQYRM+E IM +SS Y+ ++ + P G+ +T+S
Sbjct: 414 E-NKPEVVTLLKVQYRMNEQIMRFSSDWFYHGEVVSAPQIRHRGILDYDHPMEWKTNSLT 472
Query: 477 PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAH---------AKRLIQSGVHASDIGI 527
P+ + E +N+GEAE+ + +R++ + D+GI
Sbjct: 473 PSPSSGEEGEAAGESFVSSSFGRINKGEAELTLGTLEEYFTKIGKQRILDERI---DVGI 529
Query: 528 ITPYAAQVVLLKILRSKDDKLKN----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFL 583
I+PY AQV L+ L K + K + V+TVDGFQG+E++ I+IS+VRSN + ++GFL
Sbjct: 530 ISPYRAQVQYLRQLIRKREFFKPYRQCITVNTVDGFQGQERDIILISLVRSNDEGQIGFL 589
Query: 584 SDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
D RRMNVA+TRAR + ++ D T+ F K+L EY E+
Sbjct: 590 RDLRRMNVAITRARMKLIILGDVSTLGRHPFYKKLWEYIEK 630
>gi|260593445|ref|ZP_05858903.1| putative helicase [Prevotella veroralis F0319]
gi|260534561|gb|EEX17178.1| putative helicase [Prevotella veroralis F0319]
Length = 646
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 178/511 (34%), Positives = 285/511 (55%), Gaps = 45/511 (8%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN-SNLDHSQKD 203
+E +Y+ M DAL + K N A L + + QK +F P L+ +Q+
Sbjct: 148 DETSYQMMFDALERAMKAKGN-RLAYLRDLFYSRQKVG----KFSFAPIRLPWLNPTQEK 202
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A+++ L +K+V ++HGPPGTGKTTT+VE I + + R S++L CA SN+AVD I E+LV
Sbjct: 203 AVNEVLWAKDVAIVHGPPGTGKTTTMVEAINETLMRESQVLVCAQSNMAVDWISEKLVDR 262
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
+ ++R+G+P R+ ++L + + + IRK ++ L + K +
Sbjct: 263 GINVLRIGNPTRVNDKMLGFTYERKFEAHPDYPQLWSIRKAIREL-----RNHRKRSSEN 317
Query: 324 IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALE 383
+++ L + + +++ A V+ +TL GA SR ++ F + IDEAAQALE
Sbjct: 318 YHQKMERLKSRATELEIRINSELFGEARVIASTLVGANSRVMEGQKFTTLFIDEAAQALE 377
Query: 384 IACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQY 443
ACWI + + SR I AGDH QLPPTV+S+ A GLG+TL ER+ + EV ++L VQY
Sbjct: 378 AACWIPIRRASRVIFAGDHCQLPPTVKSLAALHAGLGKTLMERVVE-NKPEVVTLLKVQY 436
Query: 444 RMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEKKD---EEDST 499
RM+E IM +SS Y ++++ P R + ++ ID + +E + + ED +
Sbjct: 437 RMNEEIMRFSSNWFYGGQVESAPQIKYRGILDYDNPMVWIDTSDSSLENQSEGGQNEDKS 496
Query: 500 -------------MNEGEAEVAMA---------HAKRLIQSGVHASDIGIITPYAAQVVL 537
+N+GEAE+ + +R++ + D+G+I+PY AQV
Sbjct: 497 IFKEQFVGESFGRINKGEAELTLQTLQSYFTKIGKQRILDERI---DVGVISPYRAQVQY 553
Query: 538 LKILRSKDDKLKN----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAV 593
L+ L K + K + V+TVDGFQG+E++ I+IS+VRSN ++GFL D RRMNVA+
Sbjct: 554 LRGLIKKREFFKPYRSLISVNTVDGFQGQERDVILISLVRSNDAGQIGFLRDLRRMNVAI 613
Query: 594 TRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
TRAR + ++ + +T++ F K+L E E+
Sbjct: 614 TRARMKLIILGNVQTMTQHPFYKKLWESIEQ 644
>gi|299147977|ref|ZP_07041040.1| putative DNA helicase [Bacteroides sp. 3_1_23]
gi|298514160|gb|EFI38046.1| putative DNA helicase [Bacteroides sp. 3_1_23]
Length = 649
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 176/492 (35%), Positives = 271/492 (55%), Gaps = 24/492 (4%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + N A L +L G QKP + P+ L+ +Q+ A
Sbjct: 162 DETSYRAMFEALEDTIRAKDNR-LAELRDILLGPQKPGFRELYPVRFPW---LNSTQETA 217
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 218 VNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWICEKLVDRG 277
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L S + + IRK ++ + G ++ + R +
Sbjct: 278 VPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGIRKSIREM-GSRMRRGSYSEREGM 336
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
+ + L + + D+ +A V+ +TL + R L+ F + IDEAAQALE
Sbjct: 337 RNRISHLRDRATELEIQINADLFDSARVIASTLVSSNHRLLNGRRFSTLFIDEAAQALEA 396
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R ILAGDH QLPPT++ +EA + GL TL E++ L V S+L VQYR
Sbjct: 397 ACWIAIRKADRVILAGDHCQLPPTIKCIEAARGGLDHTLMEKVVQLKPSAV-SLLKVQYR 455
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEE----------KK 493
MHE IM + S Y+ +++A P R + + ID + D E K
Sbjct: 456 MHEAIMQFPSDWFYHGELEAAPEVRYRGILDFDTPMNWIDTSEMDFHEDFVGESFGRINK 515
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNME- 552
E + + E EA + +R++ + D G+I+PY AQV L+ + L+
Sbjct: 516 QEANLLLQELEAYIERIGKERILDERI---DFGLISPYKAQVQYLRGKIKGNSFLRPFRS 572
Query: 553 ---VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
V+TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR + ++ D T+
Sbjct: 573 LITVNTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLVILGDASTL 632
Query: 610 SSDGFLKRLIEY 621
+ F KRL+ +
Sbjct: 633 TKHPFYKRLMLF 644
>gi|288926626|ref|ZP_06420541.1| DNA helicase [Prevotella buccae D17]
gi|288336595|gb|EFC74966.1| DNA helicase [Prevotella buccae D17]
Length = 634
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 194/581 (33%), Positives = 308/581 (53%), Gaps = 54/581 (9%)
Query: 69 MGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDD 128
G+ ++ F+S KGD H F V S G +V + DS+
Sbjct: 79 FGRPVMFFRSAKGDD-KLHYFNFTGTV----------SYVDGDRMVVAVPDSAPLADLQA 127
Query: 129 IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDI 188
+ EE L ++ +E +Y+ M DAL ++ +N A L + + QK
Sbjct: 128 VGEE-----LGVQLSFDETSYKTMFDALDRVIHA-KNNRLAYLRDLFYSSQKAARFTFAP 181
Query: 189 AFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAA 248
P+ L+ +Q+ A+++ + +K+V ++HGPPGTGKTTT+VE I + + R S+++ CA
Sbjct: 182 TRFPW---LNPTQEQAVNEVMRAKDVAIVHGPPGTGKTTTLVEAINETLMRESQVMVCAQ 238
Query: 249 SNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKAL 308
SN+AVD I E+L + ++R+G+P+R+ ++L + + + IRK ++ L
Sbjct: 239 SNMAVDWICEKLTDRGINVLRIGNPSRVNDKMLSFTYERRFESHPDYPQLWAIRKTIREL 298
Query: 309 NGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNT 368
+ + ++ + + R E R +L A V+ +TL G+ R LD
Sbjct: 299 RSRRRRGSGDYHQKMERLKSRAAEIEIRINSEL-----FGEARVIASTLVGSAHRLLDGQ 353
Query: 369 SFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
+ + IDEAAQALE ACWI + K SR +LAGDH QLPPTV+S+ A + GLG+TL ER+
Sbjct: 354 KYATLFIDEAAQALEAACWIPIRKASRVVLAGDHCQLPPTVKSIAALRAGLGKTLMERIV 413
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----GV--------KRTSSTE 476
+ EV ++L VQYRM+E IM +SS Y+ ++ + P G+ +T+S
Sbjct: 414 E-NKPEVVTLLKVQYRMNEQIMRFSSDWFYHGEVVSAPQIRHRGILDYDHPMEWKTNSLT 472
Query: 477 PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAH---------AKRLIQSGVHASDIGI 527
P+ + E +N+GEAE+ + +R++ + D+GI
Sbjct: 473 PSPSSGEEGEAAGESFVSSSFGRINKGEAELTLGTLEEYFTKIGKRRILDERI---DVGI 529
Query: 528 ITPYAAQVVLLKILRSKDDKLKN----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFL 583
I+PY AQV L+ L K + K + V+TVDGFQG+E++ I+IS+VRSN + ++GFL
Sbjct: 530 ISPYRAQVQYLRQLIRKREFFKPYRQCITVNTVDGFQGQERDIILISLVRSNDEGQIGFL 589
Query: 584 SDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
D RRMNVA+TRAR + ++ D T+ F K+L EY E+
Sbjct: 590 RDLRRMNVAITRARMKLIILGDVSTLGRHPFYKKLWEYIEK 630
>gi|402304960|ref|ZP_10824023.1| AAA domain protein [Prevotella sp. MSX73]
gi|400380746|gb|EJP33559.1| AAA domain protein [Prevotella sp. MSX73]
Length = 621
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 192/581 (33%), Positives = 311/581 (53%), Gaps = 54/581 (9%)
Query: 69 MGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDD 128
G+ ++ F+S KGD H F V S G +V + DS+
Sbjct: 66 FGRPVMFFRSAKGDD-KLHYFNFTGTV----------SYVDGDRMVVAVPDSAPLADLQA 114
Query: 129 IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDI 188
+ EE L ++ +E +Y+ M DAL ++ +N A L + + QK
Sbjct: 115 VGEE-----LGVQLSFDETSYKTMFDALDRVIHA-KNNRLAYLRDLFYSSQKAARFTFAP 168
Query: 189 AFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAA 248
P+ L+ +Q+ A+++ + +K+V ++HGPPGTGKTTT+VE I + + R S+++ CA
Sbjct: 169 TRFPW---LNPTQEQAVNEVMRAKDVAIVHGPPGTGKTTTLVEAINETLMRESQVMVCAQ 225
Query: 249 SNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKAL 308
SN+AVD I E+L + ++R+G+P+R+ ++L + + + IRK ++ L
Sbjct: 226 SNMAVDWICEKLTDRGINVLRIGNPSRVNDKMLSFTYERRFESHPDYPQLWAIRKTIREL 285
Query: 309 NGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNT 368
+++ + + ++L L + + +++ A V+ +TL G+ R LD
Sbjct: 286 -----RSRRRRGSGDYHQKLERLKSRAAEIEIRINSELFGEARVIASTLVGSAHRLLDGQ 340
Query: 369 SFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
+ + IDEAAQALE ACWI + K SR +LAGDH QLPPTV+S+ A + GLG+TL ER+
Sbjct: 341 KYATLFIDEAAQALEAACWIPIRKASRVVLAGDHCQLPPTVKSIAALRAGLGKTLMERIV 400
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----GV--------KRTSSTE 476
+ EV ++L VQYRM+E IM +SS Y+ ++ + P G+ +T+S
Sbjct: 401 E-NKPEVVTLLKVQYRMNEQIMRFSSDWFYHGEVVSAPQIRHRGILDYDHPMEWKTNSLT 459
Query: 477 PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAH---------AKRLIQSGVHASDIGI 527
P+ + E +N+GEAE+ + +R++ + D+GI
Sbjct: 460 PSPSSGEEGEAAGESFVSSSFGRINKGEAELTLGTLEEYFTKIGKQRILDERI---DVGI 516
Query: 528 ITPYAAQVVLLKILRSKDDKLKN----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFL 583
I+PY AQV L+ L K + K + V+TVDGFQG+E++ I+IS+VRSN + ++GFL
Sbjct: 517 ISPYRAQVQYLRQLIRKREFFKPYRQCITVNTVDGFQGQERDIILISLVRSNDEGQIGFL 576
Query: 584 SDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
D RRMNVA+TRAR + ++ D T+ F K+L EY E+
Sbjct: 577 RDLRRMNVAITRARMKLIILGDVSTLGRHPFYKKLWEYIEK 617
>gi|424842458|ref|ZP_18267083.1| DNA/RNA helicase, superfamily I [Saprospira grandis DSM 2844]
gi|395320656|gb|EJF53577.1| DNA/RNA helicase, superfamily I [Saprospira grandis DSM 2844]
Length = 637
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 189/573 (32%), Positives = 309/573 (53%), Gaps = 31/573 (5%)
Query: 86 AHKFGTHDVVVLKPN-KADLGSPALGQGVVYRLKDSSITVAF--DDIPEEGLNSPLRLEK 142
AHKF VV + P+ + GVV+ +K + + ++P ++ + ++
Sbjct: 73 AHKFRAGTVVGIFPSSNFERKKSIFEYGVVHYIKKDEMKIILYGKELPSWVMHEQIGVQL 132
Query: 143 LANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN-SNLDHSQ 201
+E +Y M AL +++ Q+ + L +L G+ P + +P + L+ SQ
Sbjct: 133 AFDERSYLEMGKALKYVAEA-QDNRLSELREILLGKM-PARFQDHR--RPGDLGQLNTSQ 188
Query: 202 KDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLV 261
+A+ + L++++V ++HGPPGTGKTTT+V I + VKR S IL CA SN A D + ERL
Sbjct: 189 AEAVQQILAAEDVAVVHGPPGTGKTTTLVAAIKELVKRESPILVCAPSNPASDLLTERLA 248
Query: 262 PHRVRLVRLGHPARLLPQVLESALDA-------QVLRGDNSSLASDIRKEMKALNGKLLK 314
+ +VR+G+ +RL +VL+ +++ A+++ ++ K
Sbjct: 249 EQGLNVVRVGNVSRLDEKVLQHSIEGILQDRAEMKEVKKMKKEAAELFRKAGKFKRKF-G 307
Query: 315 TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVI 374
++N RRE +E + L + R + + ++ AD + TL +++R ++N F V+
Sbjct: 308 PNERNERRETYQEAKNLIRHARMMEDYLIEKILSEADAICCTLVSSMNRYIENRRFHTVV 367
Query: 375 IDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDE 434
IDEAAQALE ACWIA+ K + ILAGD QLPPTV+S +A +KGL TL E+ + E
Sbjct: 368 IDEAAQALEPACWIAIAKADKVILAGDPFQLPPTVKSRKAAQKGLSITLLEKAVERL--E 425
Query: 435 VTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEP-----TLLLIDIAGCDM 489
+L QYRMHE IM +S++ Y +++A T + P + ID AGC
Sbjct: 426 RVQLLRTQYRMHEQIMQFSNQYFYEGQLQAADFVKNWTLAMRPGGDTTPVEFIDTAGCSF 485
Query: 490 EEKKDEED-STMNEGEAEVAMAHAKRLIQSG---VHASDIGIITPYAAQVVLLKILRSKD 545
+EK + E S+ N E + H L+ V S I +I+PY QV ++ D
Sbjct: 486 DEKINPETLSSYNPEEYYILRQHLDHLLSFADKQVRPS-IAVISPYREQVRFMQEQMETD 544
Query: 546 -DKL--KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCL 602
D ++ + T+D FQG+E++ + IS+VRSN K E+GFL D RR+NVA+TRAR++ +
Sbjct: 545 FDHFPDDDITIDTIDAFQGQERDVVYISLVRSNEKGEIGFLKDTRRLNVAMTRARKKLII 604
Query: 603 VCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
+ D+ T+ F + ++Y E+H +Y S E++
Sbjct: 605 IGDSATLGQHKFYQSFMDYCEKHGKYASAWEWM 637
>gi|212693586|ref|ZP_03301714.1| hypothetical protein BACDOR_03103 [Bacteroides dorei DSM 17855]
gi|212663839|gb|EEB24413.1| putative DNA helicase [Bacteroides dorei DSM 17855]
Length = 630
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 173/492 (35%), Positives = 278/492 (56%), Gaps = 26/492 (5%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL Q+ K N A L + G K P+ L++SQ++A
Sbjct: 144 DETSYRLMFEALSQVIKAKDNR-LAELRDIFHGTLKAQTFSFGFTRFPW---LNNSQEEA 199
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K + +K+V ++HGPPGTGKTTT+VE I + + R ++++ CA SN+AVD I E+LV
Sbjct: 200 VNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNMAVDWISEKLVDRG 259
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
+ ++R+G+P R+ ++L + + + IRK ++ L + K ++ R
Sbjct: 260 IPVLRIGNPTRVNDKMLSFTYERRFESHPDYPQLWSIRKAIRELYSRSRKGAERENIRLK 319
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
L+ + E R A + A V+ TL + +R L F + IDEAAQALE
Sbjct: 320 INSLKDRATELEIRINEA---LFSEARVIACTLVSSANRVLTGRRFGTLFIDEAAQALEP 376
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R +LAGDH QLPPT++ VEA + GL +TL + + E S+L VQYR
Sbjct: 377 ACWIAIRKADRIVLAGDHCQLPPTIKCVEAARGGLDQTLMQEIVQ-NKPETVSLLKVQYR 435
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDM-EEKKDEEDSTMNE 502
M++ IM++SS+ Y ++K+ P R + + ++ G + EE E +N+
Sbjct: 436 MNDEIMHFSSEWFYQGELKSAPEVKYRGILDYDTPIEWVNTEGMNCNEEFVGESFGRINK 495
Query: 503 GEAEVAMAH---------AKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN--- 550
EA ++++ +R ++ + D+G+I+PY AQV L+ L +D K
Sbjct: 496 AEAALSISQLTHYINKIGKERFLEERI---DVGLISPYKAQVQYLRQLIKRDAFFKPYRH 552
Query: 551 -MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
+ ++TVDGFQG+E++ I+IS+VR+N ++GFL+D RRMNVA+TRAR + ++ D T+
Sbjct: 553 LITINTVDGFQGQERDVILISLVRANEDGQIGFLNDLRRMNVAITRARMKLIILGDASTL 612
Query: 610 SSDGFLKRLIEY 621
+ F K+L EY
Sbjct: 613 TKHPFYKKLYEY 624
>gi|393785219|ref|ZP_10373372.1| hypothetical protein HMPREF1071_04240 [Bacteroides salyersiae
CL02T12C01]
gi|392662922|gb|EIY56477.1| hypothetical protein HMPREF1071_04240 [Bacteroides salyersiae
CL02T12C01]
Length = 634
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 175/504 (34%), Positives = 284/504 (56%), Gaps = 42/504 (8%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAA------GLIPVLFGEQKPTVLKKDIAFKPFNSNLD 198
+E +YR M +AL + + N A G +P+ E P + F NS
Sbjct: 144 DETSYRAMFNALEDVLRAKGNRLAELRDTLLGTLPIRRRELYP------VRFPWLNS--- 194
Query: 199 HSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVE 258
+Q++A++K L +K+V ++HGPPGTGKTTT+VE I + + R +++L CA SN AVD I E
Sbjct: 195 -TQEEAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWIAE 253
Query: 259 RLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDK 318
+LV V ++R+G+P R+ ++L + + + +RK ++ ++G + K +
Sbjct: 254 KLVDRGVPVLRIGNPTRVNDKMLSFTYERRFENHPAYTELWSVRKSIREISGHIRKG-NY 312
Query: 319 NTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEA 378
+ R ++ + L + + L D+ +A V+ +TL + R L+ F + IDEA
Sbjct: 313 SERESMRNRISRLRDRATELEILINEDLFSSARVIASTLVSSNHRILEGRRFSTLFIDEA 372
Query: 379 AQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSM 438
AQALE ACWIA+ K R I AGDH QLPPT++ +EA + GL +TL E++ V S+
Sbjct: 373 AQALEAACWIAIRKADRVIFAGDHCQLPPTIKCIEAARGGLDQTLMEKVVTNKPVSV-SL 431
Query: 439 LTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDM-EEKKDEE 496
L VQYRM+E IM + S+ YN+++++ P R + ++ ID + + EE E
Sbjct: 432 LKVQYRMNEAIMRFPSEWFYNNQLESAPEVRHRGILDYDTPMVWIDTSELEFHEEFVGES 491
Query: 497 DSTMNEGEAEVAMAHAKRLIQSGVHAS------DIGIITPYAAQVVLLKILRSKDDKLKN 550
+N+ EA++ + K IQ D G+I+PY AQV L+ +K+K+
Sbjct: 492 FGRINKPEADLLIQELKNYIQRIGENRVFDERIDFGLISPYKAQVQYLR------NKIKS 545
Query: 551 ----------MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
+ ++TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR +
Sbjct: 546 SSFFRPFRELITINTVDGFQGQERDVIFISLVRANENGQIGFLNDLRRMNVAITRARMKL 605
Query: 601 CLVCDTETVSSDGFLKRLIEYFEE 624
++ + +T++ F K+L+EY E+
Sbjct: 606 VILGEAQTLTRHAFYKKLMEYVEK 629
>gi|421090780|ref|ZP_15551570.1| AAA domain protein [Leptospira kirschneri str. 200802841]
gi|410000366|gb|EKO50996.1| AAA domain protein [Leptospira kirschneri str. 200802841]
Length = 631
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 205/640 (32%), Positives = 330/640 (51%), Gaps = 34/640 (5%)
Query: 12 AVSLQEFVSVMAPLIDLEKEAEISASITS--GASRNLDTAQKKGSTILNLKCVDAQTGLM 69
++S EFV +LE+E + SI S SR + ++G T+ + + G
Sbjct: 9 SISELEFVRT-----ELEREKKEEDSIFSKDWLSRPIPDRIRQGITLYPIVYEEQTLGRE 63
Query: 70 GKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDI 129
G L F+ + + P KF T V L N+ + + ++ L I ++ +++
Sbjct: 64 GSWTLTFRFSNQEEYPI-KFQTGAPVQLGKNEDRI------RAILVSLHKEKIKISIEEV 116
Query: 130 PEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK---- 185
PE L+ L +E +Y+ M AL L + +L G KP ++
Sbjct: 117 PEWAEEGKCFLDLLPDETSYKEMFHALDVLGSATKGTRLYVNRELLLGYVKPDLISIRDS 176
Query: 186 -KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKIL 244
+ ++ L+ SQ++A+ ++ S++V ++HGPPGTGKTTT+ EI+ Q V KIL
Sbjct: 177 DRSRILGRISTFLNESQRNAVVHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLVAEEKKIL 236
Query: 245 ACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKE 304
A +N A D +VE + + ++RLGHPAR+ + S LD ++ + L ++ RK+
Sbjct: 237 VSAPTNSACDLLVESISARGISILRLGHPARVNEIAIHSTLDYKLFHHPDGKLLNEYRKD 296
Query: 305 MKALNGKLLK------TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLT 358
+ ++ + K K+K R+ + E++ L K R + + ++ + V+++T
Sbjct: 297 VIEISKQAKKFKRNFGEKEKEERKNLFMEVKELKKTIRSMEIGLIDSLVSSHPVIVSTPV 356
Query: 359 GAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKG 418
+ L+N +FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S EK
Sbjct: 357 ASARGILENRTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS---EKNS 413
Query: 419 LGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEP 477
L TLFE+ A+ L +L QYRM E I+++ SK+ Y+ +K+ ++ T P
Sbjct: 414 LETTLFEKAAERLESHGRVFLLDTQYRMKEEIVSFPSKEFYSDILKSGRPEKEKIPETFP 473
Query: 478 TL---LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ 534
L ID AG D EE DS N EA++ + L ++ +I I++PY AQ
Sbjct: 474 FLNAFQWIDTAGTDSEEVII-NDSISNPFEADLQVRLCFLLKENDWPEEEITILSPYRAQ 532
Query: 535 VVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
V L+ + KD L + VST+D FQGRE I++ VRSN + GFL + RR+NV +T
Sbjct: 533 VRLIS-EKLKDVGLTKINVSTIDSFQGRENRCILLGFVRSNPEGRSGFLKESRRINVGMT 591
Query: 595 RARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
RAR + D+ T+S D FL +LI + EE + + E+
Sbjct: 592 RARDLLLCIGDSSTLSQDPFLCKLIRFAEEKEVFRTAWEF 631
>gi|160889253|ref|ZP_02070256.1| hypothetical protein BACUNI_01675 [Bacteroides uniformis ATCC 8492]
gi|156861260|gb|EDO54691.1| putative DNA helicase [Bacteroides uniformis ATCC 8492]
Length = 637
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 181/499 (36%), Positives = 279/499 (55%), Gaps = 34/499 (6%)
Query: 145 NEVTYRRMKDAL--IQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQK 202
+E +YR M +AL SKG + A L +L G K + P+ L+ +Q+
Sbjct: 148 DETSYRTMFEALEDTLRSKGNR---LAELRDILLGTSKAGFRELYPVRFPW---LNSTQE 201
Query: 203 DAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVP 262
A++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 202 TAVNKVLCARDVAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWISEKLVD 261
Query: 263 HRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD---IRKEMKALNGKLLKTKDKN 319
V ++R+G+P R+ ++L + R +N L + IRK ++ L G + +
Sbjct: 262 RGVNVLRIGNPTRVNDKMLSFTYER---RFENHPLYPELWSIRKNLREL-GSRARRGSYD 317
Query: 320 TRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAA 379
R ++ + L + +++ A V+ +TL + R L+ F + IDEAA
Sbjct: 318 EREGVRSRMSRLRDRATALEIQINSELFDGAHVIASTLVSSNHRLLNGRRFGTLFIDEAA 377
Query: 380 QALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSML 439
QALE ACWIA+ K R +LAGDH QLPPT++ EA + GL RTL E++ V S+L
Sbjct: 378 QALEAACWIAIRKADRVVLAGDHCQLPPTIKCYEAARGGLERTLMEKVVS-NKPAVVSLL 436
Query: 440 TVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDM-EEKKDEED 497
VQYRMHE IM + S+ YN +++A R + + ID + D EE E
Sbjct: 437 KVQYRMHEEIMKFPSQWFYNGELEAASEVRYRGILDWDTPIHWIDTSEMDFKEEFVGETF 496
Query: 498 STMNEGEAEVAMAHAK---------RLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKL 548
+N+ EA++ ++ K R+++ + D GII+PY AQV L+ D L
Sbjct: 497 GRINKAEADLLLSELKIYINRISGNRILEEKI---DFGIISPYKAQVQYLRNKIKADASL 553
Query: 549 KN----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
K V+TVDGFQG+E++ I IS+VR+N + ++GFL+D RRMNVA+TRAR + ++
Sbjct: 554 KPYRSLFTVNTVDGFQGQERDVIFISLVRANEEGQIGFLNDLRRMNVAITRARMKLVILG 613
Query: 605 DTETVSSDGFLKRLIEYFE 623
+ ET+ GF ++L+E+ +
Sbjct: 614 EAETLKHHGFYRKLLEFIQ 632
>gi|345513474|ref|ZP_08792995.1| hypothetical protein BSEG_03593 [Bacteroides dorei 5_1_36/D4]
gi|229437375|gb|EEO47452.1| hypothetical protein BSEG_03593 [Bacteroides dorei 5_1_36/D4]
Length = 630
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 174/492 (35%), Positives = 278/492 (56%), Gaps = 26/492 (5%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL Q+ K N A L + G K P+ L++SQ++A
Sbjct: 144 DETSYRLMFEALSQVIKAKDNR-LAELRDIFHGTLKAQTFSFGFTRFPW---LNNSQEEA 199
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K + +K+V ++HGPPGTGKTTT+VE I + + R ++++ CA SN+AVD I E+LV
Sbjct: 200 VNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNMAVDWISEKLVDRG 259
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L + + + IRK ++ L + K ++ R
Sbjct: 260 VPVLRIGNPTRVNDKMLFFTYERRFESHPDYPQLWSIRKAIRELYSRSRKGAERENIRLK 319
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
L+ + E R A + A V+ TL + +R L F + IDEAAQALE
Sbjct: 320 INSLKDRATELEIRINEA---LFSEARVIACTLVSSANRVLTGRRFGTLFIDEAAQALEP 376
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R +LAGDH QLPPT++ VEA + GL +TL + + E S+L VQYR
Sbjct: 377 ACWIAIRKADRIVLAGDHCQLPPTIKCVEAARGGLDQTLMQEIVQ-NKPETVSLLKVQYR 435
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDM-EEKKDEEDSTMNE 502
M++ IM++SS+ Y ++K+ P R + + ++ G + EE E +N+
Sbjct: 436 MNDEIMHFSSEWFYQGELKSAPEVKYRGILDYDTPIEWVNTEGMNCNEEFVGESFGRINK 495
Query: 503 GEAEVAMAH---------AKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN--- 550
EA ++++ +R ++ + D+G+I+PY AQV L+ L +D K
Sbjct: 496 AEAALSISQLTHYINKIGKERFLEERI---DVGLISPYKAQVQYLRQLIKRDAFFKPYRH 552
Query: 551 -MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
+ ++TVDGFQG+E++ I+IS+VR+N ++GFL+D RRMNVA+TRAR + ++ D T+
Sbjct: 553 LITINTVDGFQGQERDVILISLVRANEDGQIGFLNDLRRMNVAITRARMKLIILGDASTL 612
Query: 610 SSDGFLKRLIEY 621
+ F K+L EY
Sbjct: 613 TKHPFYKKLYEY 624
>gi|410940949|ref|ZP_11372748.1| AAA domain protein [Leptospira noguchii str. 2006001870]
gi|410783508|gb|EKR72500.1| AAA domain protein [Leptospira noguchii str. 2006001870]
Length = 634
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 209/653 (32%), Positives = 339/653 (51%), Gaps = 43/653 (6%)
Query: 5 KTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITS--GASRNLDTAQKKGSTILNLKCV 62
K K +VS EFV +LE+E + SI S SR + ++G T+ +
Sbjct: 2 KDKNFSDSVSELEFVRT-----ELEREKKEEDSIFSKDWLSRPISDRIQQGITLYPIVYE 56
Query: 63 DAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSI 122
+ G G L F+ + P KF T V L N+ + + ++ L I
Sbjct: 57 EQTLGREGSWNLTFRFPNQEEYPT-KFQTGAPVQLGKNEDRV------RAILVSLHKEKI 109
Query: 123 TVAFDDIPEEGLNSPLRLEKLANEVTYRRMK---DALIQLSKGVQNGPAAGLIPVLFGEQ 179
++ +++PE L+ L +E +Y+ M D ++ +KG + L L G
Sbjct: 110 KISIEEVPEWAEEGKCFLDLLPDETSYKEMFYALDVVVSATKGTRLYVNREL---LLGYG 166
Query: 180 KPTVLK-----KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIIL 234
KP ++ + + N++L+ SQK+A+ + S++V ++HGPPGTGKTTT+ EI+
Sbjct: 167 KPDLISIRDSDRSRVLERMNTSLNESQKNAVLHCVLSQDVAVIHGPPGTGKTTTLTEIVR 226
Query: 235 QEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDN 294
Q V K+L A +N A D +VE + + ++RLGHPAR+ + S LD ++ +
Sbjct: 227 QLVAEEKKVLVSAPTNSACDLLVESISAKGIPVLRLGHPARVSEAAIHSTLDYKLFHHPD 286
Query: 295 SSLASDIRKEMKALNGKLLK------TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIK 348
L ++ +K++ ++ + K K++ R+ + E++ L K R + + ++
Sbjct: 287 GKLLNEYKKDVIEISKQAKKFKRNFGEKEREERKNLFMEVKELKKTIRSMEIGLIDSLVS 346
Query: 349 NADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPT 408
+ V+++T + L+N +FD ++DE++QALE A WI +LK R ILAGDH QLPPT
Sbjct: 347 SHSVIVSTPVASARGVLENRTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPT 406
Query: 409 VQSVEAEKKGLGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS 467
+ S EK L TLFE++ + L E +L QYRM + I+++SSK+ Y+ +K+
Sbjct: 407 LFS---EKSFLEFTLFEKVIERLKSYERVFLLDTQYRMKDEIVSFSSKEFYSGLLKSGRP 463
Query: 468 GVKR---TSSTEPTL---LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVH 521
+R T P L ID AG D EE +DS N EA++ + L ++
Sbjct: 464 EKERFFDFPKTFPFLNVFQWIDTAGTDSEEVI-VDDSISNPFEADLQVRICSLLKENNWP 522
Query: 522 ASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVG 581
+I I++PY AQV L+ + +D L + VST+D FQGRE I++ VRSNS+ G
Sbjct: 523 EEEITILSPYRAQVRLIA-EKLRDAGLTKISVSTIDSFQGRENRCILLGFVRSNSEGRSG 581
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
FL + RR+NV +TRAR + D+ T+S D FL +LI + EE + + E+
Sbjct: 582 FLKESRRINVGMTRARDLLLCIGDSSTLSQDPFLWKLIRFAEEKEVFRTAWEF 634
>gi|317479605|ref|ZP_07938732.1| hypothetical protein HMPREF1007_01848 [Bacteroides sp. 4_1_36]
gi|316904267|gb|EFV26094.1| hypothetical protein HMPREF1007_01848 [Bacteroides sp. 4_1_36]
Length = 631
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 179/497 (36%), Positives = 277/497 (55%), Gaps = 30/497 (6%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + N A L +L G K + P+ L+ +Q+ A
Sbjct: 142 DETSYRTMFEALEDTLRSKGN-RLAELRDILLGTSKAGFRELYPVRFPW---LNSTQETA 197
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 198 VNKVLCARDVAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWISEKLVDRG 257
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD---IRKEMKALNGKLLKTKDKNTR 321
V ++R+G+P R+ ++L + R +N L + IRK ++ L G + + R
Sbjct: 258 VNVLRIGNPTRVNDKMLSFTYER---RFENHPLYPELWSIRKNLREL-GSRARRGSYDER 313
Query: 322 REIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQA 381
++ + L + +++ A V+ +TL + R L+ F + IDEAAQA
Sbjct: 314 EGVRSRMSRLRDRATALEIQINSELFDGAHVIASTLVSSNHRLLNGRRFGTLFIDEAAQA 373
Query: 382 LEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTV 441
LE ACWIA+ K R +LAGDH QLPPT++ EA + GL RTL E++ V S+L V
Sbjct: 374 LEAACWIAIRKADRVVLAGDHCQLPPTIKCYEAARGGLERTLMEKVVS-NKPAVVSLLKV 432
Query: 442 QYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDM-EEKKDEEDST 499
QYRMHE IM + S+ YN +++A R + + ID + D EE E
Sbjct: 433 QYRMHEEIMKFPSQWFYNGELEAASEVRYRGILDWDTPIHWIDTSEMDFKEEFVGETFGR 492
Query: 500 MNEGEAEVAMAHAK---------RLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN 550
+N+ EA++ ++ K R+++ + D GII+PY AQV L+ D LK
Sbjct: 493 INKAEADLLLSELKIYINRISGNRILEEKI---DFGIISPYKAQVQYLRNKIKADASLKP 549
Query: 551 ----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 606
V+TVDGFQG+E++ I IS+VR+N + ++GFL+D RRMNVA+TRAR + ++ +
Sbjct: 550 YRSLFTVNTVDGFQGQERDVIFISLVRANEEGQIGFLNDLRRMNVAITRARMKLVILGEA 609
Query: 607 ETVSSDGFLKRLIEYFE 623
ET+ GF ++L+E+ +
Sbjct: 610 ETLKHHGFYRKLLEFIQ 626
>gi|167764772|ref|ZP_02436893.1| hypothetical protein BACSTE_03163 [Bacteroides stercoris ATCC
43183]
gi|167697441|gb|EDS14020.1| putative DNA helicase [Bacteroides stercoris ATCC 43183]
Length = 631
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 179/495 (36%), Positives = 278/495 (56%), Gaps = 30/495 (6%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + + N A L +L G K + P+ L+ +Q+ A
Sbjct: 142 DETSYRTMFEALEDVLRAKGN-RLAELRDILLGTVKTGFRELYPVRFPW---LNSTQESA 197
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN+AVD I E+LV
Sbjct: 198 VNKVLCARDVAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNMAVDWISEKLVDRG 257
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD---IRKEMKALNGKLLKTKDKNTR 321
V ++R+G+P R+ ++L + R +N L + IRKE++ L GK + + R
Sbjct: 258 VNVLRIGNPTRVNDKMLSFTYER---RFENHPLYPELWSIRKELRLLGGKS-RRGSYDER 313
Query: 322 REIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQA 381
I+ + L + +++ +A V+ +TL + R L+ F + IDEAAQA
Sbjct: 314 EGIRNRMSRLRDRATTLEIQINSELFDSAHVIASTLVSSNHRLLNGRRFGTLFIDEAAQA 373
Query: 382 LEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTV 441
LE ACWIA+ K R +LAGDH QLPPT++ EA + GL RTL E++ V S+L V
Sbjct: 374 LEAACWIAIRKADRVVLAGDHCQLPPTIKCYEAARGGLERTLMEKVVAGKPSAV-SLLKV 432
Query: 442 QYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK-------- 492
QYRMHE IM +SS Y +++A P R + + +D + D +E+
Sbjct: 433 QYRMHEDIMRFSSDWFYGGELEAAPEIRHRGILDWDTPVTWLDTSEMDFKEEFVGETFGR 492
Query: 493 --KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN 550
K+E + E EA + R+++ + D G+I+PY AQV L+ L+
Sbjct: 493 INKEEAGLLLKELEAYIQRIGGNRILEERI---DFGLISPYKAQVQYLRGKIKGSASLRP 549
Query: 551 ----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 606
+ V+TVDGFQG+E++ I IS+VR+N + ++GFL+D RRMNVA+TRAR + ++ +
Sbjct: 550 YRSLITVNTVDGFQGQERDVIFISLVRANEEGQIGFLNDLRRMNVAITRARMKLVILGEA 609
Query: 607 ETVSSDGFLKRLIEY 621
T+S F K+L+EY
Sbjct: 610 ATLSHHAFYKKLLEY 624
>gi|282877092|ref|ZP_06285934.1| putative DNA helicase [Prevotella buccalis ATCC 35310]
gi|281300774|gb|EFA93101.1| putative DNA helicase [Prevotella buccalis ATCC 35310]
Length = 659
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 201/579 (34%), Positives = 308/579 (53%), Gaps = 65/579 (11%)
Query: 87 HKFGTHDVVVLKPNKADLGSPALGQ----GVVYRLKDSSITVAFDDIPEEGLNSPLR--- 139
K G HD + N A S +L G+V + + V +P+ G+ + ++
Sbjct: 92 QKAGRHDE--MGKNNASTASKSLSYFPVTGIVSYADNDRMVVT---LPDNGMVTSIQTAE 146
Query: 140 ---LEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPT---VLKKDIAFKPF 193
++ +E +YR M DAL ++ N A + LF T DI F P+
Sbjct: 147 QVGVQLFFDETSYRLMFDALDRVMNAKDNRLA--YLRNLFYSTSQTAECFSFDDIRF-PW 203
Query: 194 NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAV 253
++L Q +A++K L +K+V ++HGPPGTGKTTT+VE I + +KR S++L CA SN+AV
Sbjct: 204 LNDL---QAEAVNKVLKAKDVMVVHGPPGTGKTTTLVEAIYETLKRESQVLVCAQSNMAV 260
Query: 254 DNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
D I ERLV V ++R+G+P R+ ++L + + + IRK ++ L +
Sbjct: 261 DWISERLVDRGVNVLRIGNPTRVNDKMLSFTYERRFESHPDYPQLWAIRKALRQLK-QHR 319
Query: 314 KTKDKNTRREIQK-ELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KT +++++ + R E R + QL A V+ +TLTG +R L +
Sbjct: 320 KTAGSGFHQKVERLQERATELEIRIKGQL-----FGEARVIASTLTGTANRLLMGQKYQT 374
Query: 373 VIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG 432
+ IDEAAQALE ACWIA+ K R +LAGDH QLPPT++S+ A K GL +TL +R+ +
Sbjct: 375 LFIDEAAQALEAACWIAIRKVHRVVLAGDHCQLPPTIKSIAALKGGLDKTLMQRIVE-NK 433
Query: 433 DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-------------TSSTEPTL 479
EV +ML +QYRM++ IM +SS Y+ K+++ P+ R T+
Sbjct: 434 PEVVTMLGMQYRMNDQIMRFSSDWFYHGKVQSAPAIKYRGILDYDVPIQWIDTAEQAENA 493
Query: 480 LLIDIAGCD----MEEKKDEEDSTMNEGEAEVAMAH---------AKRLIQSGVHASDIG 526
I+ + D E E +NE EAE+ ++ +RL+ V D+G
Sbjct: 494 HFIEESASDAPTFQEHFVGESFGRINEDEAELTLSALEQYFNKIGKQRLLDEAV---DVG 550
Query: 527 IITPYAAQVVLLKILRSKDDKLKN----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGF 582
II+PY AQV L+ L K K + V+TVDGFQG+E++ I+IS+VR+N ++GF
Sbjct: 551 IISPYRAQVQYLRRLIKKRPFFKPFRHLISVNTVDGFQGQERDVILISLVRANEDGQIGF 610
Query: 583 LSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEY 621
L D RRMNVA+TRAR + ++ T+ F K+L +Y
Sbjct: 611 LRDLRRMNVAMTRARMKLIILGHVPTLVRHPFYKKLYDY 649
>gi|398345459|ref|ZP_10530162.1| DNA and RNA helicase [Leptospira inadai serovar Lyme str. 10]
Length = 627
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 207/633 (32%), Positives = 328/633 (51%), Gaps = 47/633 (7%)
Query: 29 EKEAEISASITSGASRNLDTAQKKGSTILNLKCV--DAQTGLMGKTLLEFQSTKGDVLPA 86
E++AE++ A N D A++ S I V D++ G G + + TK +P
Sbjct: 15 ERDAEVARYKEELA--NADIARRISSGICVYPVVFEDSEVGPEGYWRVHLRPTKAKGVP- 71
Query: 87 HKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANE 146
F T V L ++ S V+ + D S ++ +++P+ L LE L +E
Sbjct: 72 EAFRTGGPVRLFKESDEITS------VLLKCSDDSYILSLEEVPDWLEEGKLGLEILPDE 125
Query: 147 VTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPF------NSNLDHS 200
+Y+ AL+++ + A + GE ++ F F + L+ S
Sbjct: 126 TSYKEWDRALLKIIHAERGTRAKFFSDLFLGEI-------ELKFPNFAMESGISPELNDS 178
Query: 201 QKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERL 260
Q+ AIS L ++++ +LHGPPGTGKT T+ E I V RG KILA A +N A D + E L
Sbjct: 179 QRRAISAILQTEDLILLHGPPGTGKTKTITEAIRILVDRGKKILASAPTNAATDLLAESL 238
Query: 261 VPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKAL---NGKLLKT-- 315
V +R+GHPAR+ VL +LDA + R + L +KE+ L GK +T
Sbjct: 239 GRMGVSALRIGHPARMSESVLSVSLDANLNRHPDFKLIERDKKEIGELLKKAGKYKRTFG 298
Query: 316 -KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVI 374
++ R+ + +E + L K R+RQ++ V ++++ V++ T TGA S LD +FD +
Sbjct: 299 REEAEDRKRLYQEAKELRKGIRERQKILVRYLLESHPVIVCTHTGASSSLLDKLNFDYAV 358
Query: 375 IDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDE 434
+DE +QA E A WI +L+ R ++AGD QLPPTV S E L L ERL D D
Sbjct: 359 LDEGSQATEPASWIPILRAERIVIAGDPRQLPPTVLS---EDPLLKIPLMERLLDSM-DS 414
Query: 435 V--TSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEP--------TLLLIDI 484
+ +L QYRM + I ++ +++ Y ++ + R+++ P + + ID
Sbjct: 415 IGRVYLLDTQYRMTDPIQSFPNRRFYAGRLVSGIPEEIRSANPFPSETPLFGSSFVFIDT 474
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSK 544
+G D E+ + S N EAE + KR+++SG D+ +I+PY Q LL+ + K
Sbjct: 475 SGTDSGEELFDA-SLGNRWEAEFTITILKRILESGWLPEDLVLISPYRYQRFLLEEILRK 533
Query: 545 DDKL--KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCL 602
+ + + +E+ TVD FQGREK+ +I S+VRSNS+ +GFLS+ RR NV +TRA+R L
Sbjct: 534 ELPIVGETIEIETVDSFQGREKKGVIFSLVRSNSEGNIGFLSEERRWNVGMTRAKRLLVL 593
Query: 603 VCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
+ D T+ F + LI+ E E + E+L
Sbjct: 594 IGDGSTLGEQEFFQDLIQEAESCGEVRTAWEFL 626
>gi|418676776|ref|ZP_13238054.1| AAA domain protein [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|418688291|ref|ZP_13249447.1| AAA domain protein [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418739897|ref|ZP_13296278.1| AAA domain protein [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|400322676|gb|EJO70532.1| AAA domain protein [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410737148|gb|EKQ81890.1| AAA domain protein [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410753019|gb|EKR09991.1| AAA domain protein [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 631
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 205/640 (32%), Positives = 329/640 (51%), Gaps = 34/640 (5%)
Query: 12 AVSLQEFVSVMAPLIDLEKEAEISASITS--GASRNLDTAQKKGSTILNLKCVDAQTGLM 69
++S EFV +LE+E + SI S SR + ++G T+ + + G
Sbjct: 9 SISELEFVRT-----ELEREKKEEDSIFSKDWLSRPIPDRIRQGITLYPIVYEEQTLGRE 63
Query: 70 GKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDI 129
G L F+ + + P KF T V L N+ + + ++ L I ++ +++
Sbjct: 64 GSWTLTFRFSNQEEYPI-KFQTGAPVQLGKNEDRI------RAILVSLHKEKIKISIEEV 116
Query: 130 PEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK---- 185
PE L+ L +E +Y+ M AL L + +L G KP ++
Sbjct: 117 PEWAEEGKCFLDLLPDETSYKEMFHALDVLGSATKGTRLYVNRELLLGYVKPDLISIRDS 176
Query: 186 -KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKIL 244
+ + L+ SQK+A+ ++ S++V ++HGPPGTGKTTT+ EI+ Q V KIL
Sbjct: 177 DRSRILGRISMFLNESQKNAVVHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLVAEEKKIL 236
Query: 245 ACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKE 304
A +N A D +VE + + ++RLGHPAR+ + S LD ++ + L ++ RK+
Sbjct: 237 VSAPTNSACDLLVESISARGISVLRLGHPARVNEIAIHSTLDYKLFHHPDGKLLNEYRKD 296
Query: 305 MKALNGKLLK------TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLT 358
+ ++ + K K++ R+ + E++ L K R + + ++ + V+++T
Sbjct: 297 VIEISKQAKKFKRNFGEKEREERKNLFMEVKELKKTIRSMEIGLIDSLVSSHPVIVSTPV 356
Query: 359 GAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKG 418
+ L+N +FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S EK
Sbjct: 357 ASARDILENRTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS---EKNS 413
Query: 419 LGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEP 477
L TLFE+ A+ L +L QYRM E I+++ SK+ Y+ +K+ ++ T P
Sbjct: 414 LETTLFEKAAERLESHGRVFLLDTQYRMKEEIVSFPSKEFYSDILKSGRPEKEKIPETFP 473
Query: 478 TL---LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ 534
L ID AG D EE DS N EA++ + L ++ +I I++PY AQ
Sbjct: 474 FLNAFQWIDTAGTDSEEVII-NDSISNPFEADLQVRLCFLLKENDWPEEEITILSPYRAQ 532
Query: 535 VVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
V L+ + KD L + VST+D FQGRE I++ VRSN + GFL + RR+NV +T
Sbjct: 533 VRLIS-EKLKDVGLTKINVSTIDSFQGRENRCILLGFVRSNPEGRSGFLKESRRINVGMT 591
Query: 595 RARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
RAR + D+ T+S D FL +LI + EE + + E+
Sbjct: 592 RARDLLLCIGDSSTLSQDPFLCKLIRFAEEKEVFRTAWEF 631
>gi|374384247|ref|ZP_09641773.1| putative DNA helicase [Odoribacter laneus YIT 12061]
gi|373228854|gb|EHP51157.1| putative DNA helicase [Odoribacter laneus YIT 12061]
Length = 645
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/440 (36%), Positives = 255/440 (57%), Gaps = 16/440 (3%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNI 256
L+ Q+ A++ L ++++ ++HGPPGTGKTTT+VE I + + + +++L CA SN+AVD I
Sbjct: 190 LNDQQEKAVNHVLRAQDIAIVHGPPGTGKTTTLVEAIYETLHKENQVLVCAQSNMAVDWI 249
Query: 257 VERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK 316
E+LV + ++R+G+P R+ ++L + + + +IRK ++ L+ KL K
Sbjct: 250 SEKLVDRGIHVLRIGNPTRVNDKMLSFTYERRFEAHPDYPELWNIRKTIRELSPKLRK-- 307
Query: 317 DKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIID 376
+ TR + L+ L + + ++ A V+ +TL G+ ++ L+ F + ID
Sbjct: 308 -RETREAVYSRLQHLRHRATELEIKIEQELFGEARVIASTLVGSANKILEGKRFSTLFID 366
Query: 377 EAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT 436
EAAQALE ACWIA+ K R ILAGDH QLPPT+++ EA ++GL RTL +++A V
Sbjct: 367 EAAQALEAACWIAIRKTDRVILAGDHCQLPPTIKNKEAAQQGLARTLMQKVAQRQPPAV- 425
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS-GVKRTSSTEPTLLLIDIAGCD-MEEKKD 494
S+L +QYRMHE IM++ S+ Y++ ++A P + + ++ D D EE
Sbjct: 426 SLLQIQYRMHEDIMHFPSRWFYHNCLQAAPEVRFRNILEYDSPIVWCDTQAYDSSEETAG 485
Query: 495 EEDSTMNEGEAEVAMAHAKRLIQSGVHAS------DIGIITPYAAQVVLLKILRSKDDKL 548
E S +N EA + + + IQ D G+I+PY AQV ++ L K+
Sbjct: 486 ESLSHLNRTEALLLLQQLQEYIQKIGETRILDEQIDFGLISPYKAQVRYIRQLMRKNPFF 545
Query: 549 KN----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
K + ++TVDGFQG+E++ I IS+VR+N +GFL D RRMNVA+TRAR + L+
Sbjct: 546 KPFSRLISINTVDGFQGQERDVIFISLVRANEAGNIGFLQDLRRMNVAITRARMKLILLG 605
Query: 605 DTETVSSDGFLKRLIEYFEE 624
D T+ F K L EY +E
Sbjct: 606 DALTLLHHPFYKALFEYIQE 625
>gi|329957754|ref|ZP_08298229.1| putative DNA helicase [Bacteroides clarus YIT 12056]
gi|328522631|gb|EGF49740.1| putative DNA helicase [Bacteroides clarus YIT 12056]
Length = 632
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 179/501 (35%), Positives = 275/501 (54%), Gaps = 42/501 (8%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAA------GLIPVLFGEQKPTVLKKDIAFKPFNSNLD 198
+E +YR M +AL + + N A G + F E P + F NS
Sbjct: 142 DETSYRTMFEALEDVLRAKGNRLAELRDILLGTVRAGFRELYP------VRFPWLNS--- 192
Query: 199 HSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVE 258
+Q+ A++K L +++ ++HGPPGTGKTTT+VE I + + R ++L CA SN+AVD I E
Sbjct: 193 -TQETAVNKVLCARDTAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNMAVDWISE 251
Query: 259 RLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD---IRKEMKALNGKLLKT 315
+LV V ++R+G+P R+ ++L + R +N L + IRKE++ L GK +
Sbjct: 252 KLVDRGVNVLRIGNPTRVNDKMLSFTYER---RFENHPLYPELWSIRKELRQLGGKA-RH 307
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVII 375
+ R I+ + L + ++ +A V+ +TL + R L+ F + I
Sbjct: 308 GSYDEREGIRSRMSRLRDRATTLEIQINAELFDSAHVIASTLVSSNHRLLNGRRFGTLFI 367
Query: 376 DEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEV 435
DEAAQALE ACWIA+ K R +LAGDH QLPPT++ EA + GL +TL E++ V
Sbjct: 368 DEAAQALEAACWIAIRKADRVVLAGDHCQLPPTIKCYEAARSGLEQTLMEKVV-ANKPSV 426
Query: 436 TSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK-- 492
S+L VQYRMHE IM +SS Y+ ++A P R + + +D + D +E+
Sbjct: 427 VSLLKVQYRMHEDIMRFSSDWFYDGALEAAPEIRHRGILDWDTPITWLDTSEMDFKEEFV 486
Query: 493 --------KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSK 544
K+E + E EA + R+++ + D G+I+PY AQV L+
Sbjct: 487 GETFGRINKEEAHLLLKELEAYIQRIGGSRILEERI---DFGLISPYKAQVQYLRGKIKS 543
Query: 545 DDKLKN----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
L+ + V+TVDGFQG+E++ I IS+VR+N + ++GFL+D RRMNVA+TRAR +
Sbjct: 544 SASLRPYRSLITVNTVDGFQGQERDVIFISLVRANEEGQIGFLNDLRRMNVAITRARMKL 603
Query: 601 CLVCDTETVSSDGFLKRLIEY 621
++ + T+S F KRL+EY
Sbjct: 604 VILGEATTLSHHTFYKRLLEY 624
>gi|313148991|ref|ZP_07811184.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|424664802|ref|ZP_18101838.1| hypothetical protein HMPREF1205_00677 [Bacteroides fragilis HMW
616]
gi|313137758|gb|EFR55118.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404575335|gb|EKA80078.1| hypothetical protein HMPREF1205_00677 [Bacteroides fragilis HMW
616]
Length = 656
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 174/493 (35%), Positives = 276/493 (55%), Gaps = 26/493 (5%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK-PFNSNLDHSQKD 203
+E +YR M +AL + + N A L +L +Q P+ ++ + P+ L+ +Q++
Sbjct: 166 DETSYRSMFEALEDVIRAKGNR-LAQLRDILLSKQ-PSQWREIYPVRFPW---LNTTQEE 220
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A++K L +K+V ++HGPPGTGKTTT+VE + + + R +++L CA SN AVD I E+LV
Sbjct: 221 AVNKVLRAKDVAIVHGPPGTGKTTTLVEAVYETLHRENQVLVCAQSNTAVDWIAEKLVDR 280
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
V ++R+G+P+R+ ++L + + + IRK ++ + G ++ + R
Sbjct: 281 GVPVLRIGNPSRVNDKMLSFTYERRFESHPAYTELWGIRKSIRDM-GHHMRKGGYSERES 339
Query: 324 IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALE 383
+ + L + + + L D+ +A V+ +TL + R L F + IDEAAQALE
Sbjct: 340 TRNRILRLKERATELEILINEDLFSSARVIASTLVSSNHRILTGRHFSSLFIDEAAQALE 399
Query: 384 IACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQY 443
ACWIA+ K R ILAGDH QLPPT++ +EA + GL RTL E++ + E S+L +QY
Sbjct: 400 AACWIAIRKADRVILAGDHCQLPPTIKCMEAARSGLDRTLMEKVV-MNKQEAVSLLKIQY 458
Query: 444 RMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDM-EEKKDEEDSTMN 501
RMH IM + S Y +++A P R + + ID + D EE E +N
Sbjct: 459 RMHRSIMQFPSAWFYQGELEAAPEISHRGILELDTPINWIDTSEMDFHEEFVGESFGRIN 518
Query: 502 EGEAEVAMAHAKRLIQS------GVHASDIGIITPYAAQVVLLK-------ILRSKDDKL 548
+ EA + + + I+ D G+I+PY AQV L+ R ++
Sbjct: 519 KPEANLLLQELENYIRKIGENRVAEECIDFGLISPYKAQVQYLRNKIKGNPFFRPYRSRI 578
Query: 549 KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTET 608
V+TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR + ++ D T
Sbjct: 579 T---VNTVDGFQGQERDVIFISLVRANENGQIGFLNDLRRMNVAITRARMKLVILGDATT 635
Query: 609 VSSDGFLKRLIEY 621
+S F ++LIEY
Sbjct: 636 MSKHAFYRKLIEY 648
>gi|379729756|ref|YP_005321952.1| AAA ATPase [Saprospira grandis str. Lewin]
gi|378575367|gb|AFC24368.1| AAA ATPase [Saprospira grandis str. Lewin]
Length = 637
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 193/572 (33%), Positives = 313/572 (54%), Gaps = 29/572 (5%)
Query: 86 AHKFGTHDVVVLKPN-KADLGSPALGQGVVYRLKDSSITVAF--DDIPEEGLNSPLRLEK 142
AHKF + VV + P+ + GVV +K + + ++P ++ + ++
Sbjct: 73 AHKFRSGTVVGIFPSSNFERKKSIFEYGVVQYIKKDEMKIILYGKELPSWVMHEQIGVQL 132
Query: 143 LANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN-SNLDHSQ 201
+E +Y M AL +++ Q+ + L +L G+ P + +P + L++SQ
Sbjct: 133 AFDERSYLEMGKALKYVAEA-QDNRLSELREILLGKM-PARFQDHR--RPGDLGQLNNSQ 188
Query: 202 KDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLV 261
+A+ + L++++V ++HGPPGTGKTTT+V I + VKR S +L CA SN A D + ERL
Sbjct: 189 AEAVQQILAAEDVAVVHGPPGTGKTTTLVAAIKELVKRESPVLVCAPSNPASDLLTERLA 248
Query: 262 PHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK----- 316
+ +VR+G+ +RL +VL+ +++ + ++KE L K K K
Sbjct: 249 DQGLNVVRVGNVSRLDEKVLQHSIEGILQERAEMKEVKKMKKEAAELFRKAGKFKRKFGP 308
Query: 317 -DKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVII 375
++N RRE +E + L + R + + V+ AD + TL +++R ++N F V+I
Sbjct: 309 NERNERRETYQEAKNLIRHARMMEDYVIEKVLSEADAICCTLVSSMNRYIENRRFHTVVI 368
Query: 376 DEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEV 435
DEAAQALE ACWIA+ K + ILAGD QLPPTV+S +A +KGL TL E+ + D V
Sbjct: 369 DEAAQALEPACWIAIAKADKVILAGDPFQLPPTVKSRKAAQKGLSITLLEKAVERL-DRV 427
Query: 436 TSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEP-----TLLLIDIAGCDME 490
+L QYRMHE IM +S++ Y +++A T + P + ID AGC +
Sbjct: 428 -QLLKTQYRMHEQIMQFSNQYFYEGQLQAADFVKNWTLAMRPGGDTTPVEFIDTAGCSFD 486
Query: 491 EKKDEED-STMNEGEAEVAMAHAKRLIQSG---VHASDIGIITPYAAQVVLLKILRSKD- 545
EK + E S+ N E + H L+ V S I +I+PY QV ++ D
Sbjct: 487 EKINPETLSSYNPEEYYILRQHLDHLLSFADKQVRPS-IAVISPYREQVRFMQEQMETDF 545
Query: 546 DKL--KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLV 603
D ++ + T+D FQG+E++ + IS+VRSN + E+GFL D RR+NVA+TRAR++ ++
Sbjct: 546 DHFPDDDITIDTIDAFQGQERDVVYISLVRSNERGEIGFLKDTRRLNVAMTRARKKLIII 605
Query: 604 CDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
D+ T+ F + ++Y E+H +Y S E++
Sbjct: 606 GDSATLGQHPFYQSFMDYCEKHGKYASAWEWM 637
>gi|427385832|ref|ZP_18882139.1| hypothetical protein HMPREF9447_03172 [Bacteroides oleiciplenus YIT
12058]
gi|425726871|gb|EKU89734.1| hypothetical protein HMPREF9447_03172 [Bacteroides oleiciplenus YIT
12058]
Length = 629
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 179/501 (35%), Positives = 275/501 (54%), Gaps = 37/501 (7%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + N A L + G KP + P+ L+ +Q+ A
Sbjct: 141 DETSYRTMFEALSDVIHAKGN-RLAELRDTMLGTLKPAFRELYPVRFPW---LNSTQETA 196
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L S++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 197 VNKVLCSRDVSIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWISEKLVDRG 256
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L + + + + IRK M+ +NG + + + E
Sbjct: 257 VNVLRIGNPTRVNDKMLSFTYERRFESHPSYTELWGIRKAMREMNG-----RRRGSYEER 311
Query: 325 QKELRTLSKEERKRQQLAV---TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQA 381
+ LS+ + QL + D+ +A V+ +TL + R L+ F + IDEAAQA
Sbjct: 312 ESARNRLSRLRDRATQLEIQINADLFDSAHVIASTLVSSNHRVLNGRRFGTLFIDEAAQA 371
Query: 382 LEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTV 441
LE ACWIA+ K R +LAGDH QLP T++ EA + GL TL ER+ V S+L +
Sbjct: 372 LEAACWIAIRKADRIVLAGDHCQLPATIKCYEAARAGLEHTLMERIVTT-KPTVVSLLKI 430
Query: 442 QYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDM-EEKKDEEDST 499
QYRM+E IM++ S+ Y+ +++A P R + + ID + + EE E
Sbjct: 431 QYRMNEAIMHFPSQWFYDGQLEAAPEIRHRGILDWDTPITWIDTSEMEFKEEFVGETFGR 490
Query: 500 MNEGEAEVAMAHAKRLIQS-GVH-----ASDIGIITPYAAQVVLLKILRSKDDKLKN--- 550
+N EA + + + IQ G H D GII+PY AQV L+ +K+K
Sbjct: 491 INREEAHLLLKELEAYIQRIGGHRILDERIDFGIISPYKAQVQYLR------NKIKTSAA 544
Query: 551 -------MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLV 603
+ V+TVDGFQG+E++ + IS+VR+N + ++GFL+D RRMNVA+TRAR + ++
Sbjct: 545 LRPYRSLLTVNTVDGFQGQERDVVFISLVRANEEGQIGFLNDLRRMNVAITRARMKLVIL 604
Query: 604 CDTETVSSDGFLKRLIEYFEE 624
+ T+ F +LIEY E
Sbjct: 605 GEANTLKHHKFYHKLIEYINE 625
>gi|53715040|ref|YP_101032.1| helicase [Bacteroides fragilis YCH46]
gi|52217905|dbj|BAD50498.1| putative helicase [Bacteroides fragilis YCH46]
Length = 634
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 177/500 (35%), Positives = 279/500 (55%), Gaps = 40/500 (8%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK-PFNSNLDHSQKD 203
+E +YR M +AL + + N A L +L +Q P+ ++ + P+ L+ +Q+
Sbjct: 144 DETSYRTMFEALEDVIRAKGN-RLAELRDILLSKQ-PSCWRETYPVRFPW---LNSTQEA 198
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A++K L +K+V ++HGPPGTGKTTT+VE I + + R +++L CA SN AVD I E+LV
Sbjct: 199 AVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWIAEKLVDR 258
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
V ++R+G+P+R+ ++L + + + IRK ++ + ++ K+ + RE
Sbjct: 259 GVPVLRIGNPSRVNDKMLSFTYERRFEGHPAYTELWGIRKSIREMGNRMRKSS--YSERE 316
Query: 324 IQKELRTLSKEERKRQQLAVT-DVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQAL 382
+ +E ++ + D+ A V+ +TL + R L F + IDEAAQAL
Sbjct: 317 AARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRRFTTLFIDEAAQAL 376
Query: 383 EIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQ 442
E ACWIA+ K R I AGDH QLPPT++ +EA + GL +TL E++A E S+L VQ
Sbjct: 377 EAACWIAIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVA-ANKQETVSLLKVQ 435
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK--------- 492
YRMH+ IM +SS+ Y +++A P R + + ID + + E+
Sbjct: 436 YRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLDLPMSWIDTSEMEFHEEFIGESFGRI 495
Query: 493 -KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK-- 549
K E + + E EA + KR+++ + D G+I+PY AQV L+ KLK
Sbjct: 496 NKPEANLLLQELEAYIRKIGEKRVLEERI---DFGLISPYKAQVQYLR------GKLKGC 546
Query: 550 --------NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
+ + TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR +
Sbjct: 547 SFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLV 606
Query: 602 LVCDTETVSSDGFLKRLIEY 621
++ D T+S F K+LI Y
Sbjct: 607 ILGDAVTMSKHAFYKKLIGY 626
>gi|398339204|ref|ZP_10523907.1| DNA and RNA helicase [Leptospira kirschneri serovar Bim str. 1051]
Length = 631
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 204/640 (31%), Positives = 329/640 (51%), Gaps = 34/640 (5%)
Query: 12 AVSLQEFVSVMAPLIDLEKEAEISASITS--GASRNLDTAQKKGSTILNLKCVDAQTGLM 69
++S EFV +LE+E + SI S SR + ++G T+ + + G
Sbjct: 9 SISELEFVRT-----ELEREKKEEDSIFSKDWLSRPIPDRIRQGITLYPIVYEEQTLGRE 63
Query: 70 GKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDI 129
G L F+ + + P KF T V L N+ + + ++ L I ++ +++
Sbjct: 64 GSWTLTFRFSNQEEYPI-KFQTGAPVQLGKNEDRI------RAILVSLHKEKIKISIEEV 116
Query: 130 PEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK---- 185
PE L+ L +E +Y+ M AL L + +L G KP ++
Sbjct: 117 PEWAEEGKCFLDLLPDETSYKEMFHALDVLGSATKGTRLYVNRELLLGYVKPDLISIRDS 176
Query: 186 -KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKIL 244
+ + L+ SQK+A+ ++ S++V ++HGPPGTGKTTT+ EI+ Q V KIL
Sbjct: 177 DRSRILGRISMFLNESQKNAVVHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLVAEEKKIL 236
Query: 245 ACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKE 304
A +N A D +VE + + ++RLGHPAR+ + S LD ++ + L ++ RK+
Sbjct: 237 VSAPTNSACDLLVESISARGISVLRLGHPARVNEIAIHSTLDYKLFHHPDGKLLNEYRKD 296
Query: 305 MKALNGKLLK------TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLT 358
+ ++ + K K++ R+ + E++ L K R + + ++ + V+++T
Sbjct: 297 VIEISKQAKKFKRNFGEKEREERKNLFMEVKELKKTIRSMEIGLIDSLVSSHPVIVSTPV 356
Query: 359 GAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKG 418
+ L+N +FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S EK
Sbjct: 357 ASARDILENRTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS---EKNS 413
Query: 419 LGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEP 477
L TLFE+ A+ L +L QYRM E I+++ SK+ Y+ +K+ ++ T P
Sbjct: 414 LETTLFEKAAERLESHGRVFLLDTQYRMKEEIVSFPSKEFYSDILKSGRPEKEKIPETFP 473
Query: 478 TL---LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ 534
L ID AG D EE DS N EA++ + L ++ +I I++PY AQ
Sbjct: 474 FLNAFQWIDTAGTDSEEVII-NDSISNPFEADLQVRLCFLLKENDWPEEEITILSPYRAQ 532
Query: 535 VVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
V L+ + +D L + VST+D FQGRE I++ VRSN + GFL + RR+NV +T
Sbjct: 533 VRLIS-EKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNPEGRSGFLKESRRINVGMT 591
Query: 595 RARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
RAR + D+ T+S D FL +LI + EE + + E+
Sbjct: 592 RARDLLLCIGDSSTLSQDPFLCKLIRFAEEKEVFRTAWEF 631
>gi|288803446|ref|ZP_06408878.1| DNA helicase [Prevotella melaninogenica D18]
gi|288334056|gb|EFC72499.1| DNA helicase [Prevotella melaninogenica D18]
Length = 638
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 210/646 (32%), Positives = 332/646 (51%), Gaps = 76/646 (11%)
Query: 29 EKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLE-FQSTKGDVLPAH 87
EKEA + T+G R + K+G L+ + + +E F++ GD+ H
Sbjct: 6 EKEAFRKQTETAGMQRKV----KRGDAWFPLRVGKRFYNGLNQLCIEVFRTQDGDI--EH 59
Query: 88 KFGTHDVVVL---------KPNKA-DLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSP 137
F ++ PNKA L V Y D + D P L S
Sbjct: 60 NFECGRPLLFFKFIAKEEGSPNKAVQLKYYGFTGTVSYVEGDRMVVAVPDSAPLLDLQSA 119
Query: 138 ---LRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN 194
+ + +E++Y+ M DAL + K N A L + + QK + +F P
Sbjct: 120 SEQVGCQLGFDEMSYQMMFDALDRTMKAKGN-RLAYLRDLFYSRQKA----ERFSFAPIR 174
Query: 195 -SNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAV 253
L+ +Q+ A+++ L +K+V ++HGPPGTGKTTT+VE I + + R S+++ CA SN+AV
Sbjct: 175 LPWLNPTQEKAVNEVLWAKDVAVVHGPPGTGKTTTLVEAINETLMRESQVMVCAQSNMAV 234
Query: 254 DNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
D I E+LV + ++R+G+P R+ ++L + + + IRK ++ L
Sbjct: 235 DWICEKLVDRGINVLRIGNPTRVNDKMLGFTYERKFEAHPDYPQLWSIRKAIRELRNN-- 292
Query: 314 KTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLV 373
+ K + + L++ + E R A+ A VV +TL GA SR ++ +F +
Sbjct: 293 RKKGSESYHQKMDRLKSRATELEIRINAAL---FGEARVVASTLVGANSRIMEGQNFTTL 349
Query: 374 IIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGD 433
IDEAAQALE ACWIA+ + SR I AGDH QLPPTV+S+ A + GLG+TL ER+ +
Sbjct: 350 FIDEAAQALEAACWIAIRRASRVIFAGDHCQLPPTVKSIAALRGGLGKTLMERIVE-NKP 408
Query: 434 EVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLID------IAG 486
EV ++L VQYRM+E IM +SS Y +++ P R + ++ ID +A
Sbjct: 409 EVVTLLKVQYRMNEEIMRFSSDWFYGGQVETAPQIKYRGILDYDNPMVWIDTSDEAVVAS 468
Query: 487 CDMEEKK----------DEEDST-----------MNEGEAEVAMAH---------AKRLI 516
D+ E + D+E++ +N+GEAE+ + +R++
Sbjct: 469 YDLTESEANSAPSQLDNDKENAFHEQFVGSSFGRINKGEAELTLKTLVDYFTKIGKQRVL 528
Query: 517 QSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN----MEVSTVDGFQGREKEAIIISMV 572
+ D+G+I+PY AQV L+ L K K + V+TVDGFQG+E++ I+IS+V
Sbjct: 529 DERI---DVGVISPYRAQVQYLRSLIKKRAFFKPYRSLISVNTVDGFQGQERDVILISLV 585
Query: 573 RSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRL 618
RSN ++GFL D RRMNVA+TRAR + ++ + +T++ F K+L
Sbjct: 586 RSNDDGQIGFLRDLRRMNVAITRARMKLIILGNVQTMTKHEFYKKL 631
>gi|375359786|ref|YP_005112558.1| putative DNA-binding protein [Bacteroides fragilis 638R]
gi|301164467|emb|CBW24025.1| putative DNA-binding protein [Bacteroides fragilis 638R]
Length = 634
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 177/500 (35%), Positives = 279/500 (55%), Gaps = 40/500 (8%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK-PFNSNLDHSQKD 203
+E +YR M +AL + + N A L +L +Q P+ ++ + P+ L+ +Q+
Sbjct: 144 DETSYRTMFEALEDVIRAKGN-RLAELRDILLSKQ-PSCWRETYPVRFPW---LNSTQEA 198
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A++K L +K+V ++HGPPGTGKTTT+VE I + + R +++L CA SN AVD I E+LV
Sbjct: 199 AVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWIAEKLVDR 258
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
V ++R+G+P+R+ ++L + + + IRK ++ + ++ K+ + RE
Sbjct: 259 GVPVLRIGNPSRVNDKMLSFTYERRFEGHPAYTELWGIRKSIREMGNRMRKSS--YSERE 316
Query: 324 IQKELRTLSKEERKRQQLAVT-DVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQAL 382
+ +E ++ + D+ A V+ +TL + R L F + IDEAAQAL
Sbjct: 317 AARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRRFTTLFIDEAAQAL 376
Query: 383 EIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQ 442
E ACWIA+ K R I AGDH QLPPT++ +EA + GL +TL E++A E S+L VQ
Sbjct: 377 EAACWIAIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVA-ANKQETVSLLKVQ 435
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK--------- 492
YRMH+ IM +SS+ Y +++A P R + + ID + + E+
Sbjct: 436 YRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLDLPMSWIDTSEMEFHEEFIGESFGRI 495
Query: 493 -KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK-- 549
K E + + E EA + KR+++ + D G+I+PY AQV L+ KLK
Sbjct: 496 NKPEANLLLQELEAYIRKIGEKRVLEERI---DFGLISPYKAQVQYLR------GKLKGC 546
Query: 550 --------NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
+ + TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR +
Sbjct: 547 LFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLV 606
Query: 602 LVCDTETVSSDGFLKRLIEY 621
++ D T+S F K+LI Y
Sbjct: 607 ILGDAVTMSKHAFYKKLIGY 626
>gi|423285449|ref|ZP_17264331.1| hypothetical protein HMPREF1204_03869 [Bacteroides fragilis HMW
615]
gi|404578964|gb|EKA83682.1| hypothetical protein HMPREF1204_03869 [Bacteroides fragilis HMW
615]
Length = 634
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 177/500 (35%), Positives = 280/500 (56%), Gaps = 40/500 (8%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK-PFNSNLDHSQKD 203
+E +YR M +AL + + N A L +L +Q P+ ++ + P+ L+ +Q+
Sbjct: 144 DETSYRTMFEALEDVIRAKGN-RLAELRDILLSKQ-PSRWRETYPVRFPW---LNSTQEA 198
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A++K L +K+V ++HGPPGTGKTTT+VE I + + R +++L CA SN AVD I E+LV
Sbjct: 199 AVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWIAEKLVDR 258
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
V ++R+G+P+R+ ++L + + + + IRK ++ + ++ K+ + RE
Sbjct: 259 GVPVLRIGNPSRVNDKMLSFTYERRFEGHPSYTELWGIRKSIREMGNRMRKSS--YSERE 316
Query: 324 IQKELRTLSKEERKRQQLAVT-DVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQAL 382
+ +E ++ + D+ A V+ +TL + R L F + IDEAAQAL
Sbjct: 317 AARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRRFTTLFIDEAAQAL 376
Query: 383 EIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQ 442
E ACWIA+ K R I AGDH QLPPT++ +EA + GL +TL E++A E S+L VQ
Sbjct: 377 EAACWIAIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVA-ANKQETVSLLKVQ 435
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK--------- 492
YRMH+ IM +SS+ Y +++A P R + + ID + + E+
Sbjct: 436 YRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLDLPMSWIDTSEMEFHEEFVGESFGRI 495
Query: 493 -KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK-- 549
K E + + E EA + KR+++ + D G+I+PY AQV L+ KLK
Sbjct: 496 NKPEANLLLQELEAYIRKIGEKRVLEERI---DFGLISPYKAQVQYLR------GKLKGC 546
Query: 550 --------NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
+ + TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR +
Sbjct: 547 LFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLV 606
Query: 602 LVCDTETVSSDGFLKRLIEY 621
++ D T+S F K+LI Y
Sbjct: 607 ILGDAVTMSKHAFYKKLIGY 626
>gi|423260347|ref|ZP_17241269.1| hypothetical protein HMPREF1055_03546 [Bacteroides fragilis
CL07T00C01]
gi|423266481|ref|ZP_17245483.1| hypothetical protein HMPREF1056_03170 [Bacteroides fragilis
CL07T12C05]
gi|387775493|gb|EIK37600.1| hypothetical protein HMPREF1055_03546 [Bacteroides fragilis
CL07T00C01]
gi|392701058|gb|EIY94219.1| hypothetical protein HMPREF1056_03170 [Bacteroides fragilis
CL07T12C05]
Length = 634
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 177/500 (35%), Positives = 278/500 (55%), Gaps = 40/500 (8%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK-PFNSNLDHSQKD 203
+E +YR M +AL + + N A L +L +Q P+ + + P+ L+ +Q+
Sbjct: 144 DETSYRTMFEALEDVIRAKGN-RLAELRDILLSKQ-PSCWRATYPVRFPW---LNSTQEA 198
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A++K L +K+V ++HGPPGTGKTTT+VE I + + R +++L CA SN AVD I E+LV
Sbjct: 199 AVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWIAEKLVDR 258
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
V ++R+G+P+R+ ++L + + + IRK ++ + ++ K+ + RE
Sbjct: 259 GVPVLRIGNPSRVNDKMLSFTYERRFEGHPAYTELWGIRKSIREMGNRMRKSS--YSERE 316
Query: 324 IQKELRTLSKEERKRQQLAVT-DVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQAL 382
+ +E ++ + D+ A V+ +TL + R L F + IDEAAQAL
Sbjct: 317 AARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGWRFTTLFIDEAAQAL 376
Query: 383 EIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQ 442
E ACWIA+ K R I AGDH QLPPT++ +EA + GL +TL E++A E S+L VQ
Sbjct: 377 EAACWIAIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVA-ANKQETVSLLKVQ 435
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK--------- 492
YRMH+ IM +SS+ Y +++A P R + + ID + + E+
Sbjct: 436 YRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLDLPMSWIDTSEMEFHEEFVGESFGRI 495
Query: 493 -KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK-- 549
K E + + E EA + KR+++ + D G+I+PY AQV L+ KLK
Sbjct: 496 NKPEANLLLQELEAYIRKIGEKRVLEERI---DFGLISPYKAQVQYLR------GKLKGC 546
Query: 550 --------NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
+ + TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR +
Sbjct: 547 LFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLV 606
Query: 602 LVCDTETVSSDGFLKRLIEY 621
++ D T+S F K+LI Y
Sbjct: 607 ILGDAVTMSKHAFYKKLIGY 626
>gi|383116067|ref|ZP_09936820.1| hypothetical protein BSHG_3112 [Bacteroides sp. 3_2_5]
gi|251945242|gb|EES85680.1| hypothetical protein BSHG_3112 [Bacteroides sp. 3_2_5]
Length = 634
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 177/500 (35%), Positives = 278/500 (55%), Gaps = 40/500 (8%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK-PFNSNLDHSQKD 203
+E +YR M +AL + + N A L +L +Q P+ + + P+ L+ +Q+
Sbjct: 144 DETSYRTMFEALEDVIRAKGN-RLAELRDILLSKQ-PSCWRATYPVRFPW---LNSTQEA 198
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A++K L +K+V ++HGPPGTGKTTT+VE I + + R +++L CA SN AVD I E+LV
Sbjct: 199 AVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWIAEKLVDR 258
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
V ++R+G+P+R+ ++L + + + IRK ++ + ++ K+ + RE
Sbjct: 259 GVPVLRIGNPSRVNDKMLSFTYERRFEGHPAYTELWGIRKSIREMGNRMRKSS--YSERE 316
Query: 324 IQKELRTLSKEERKRQQLAVT-DVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQAL 382
+ +E ++ + D+ A V+ +TL + R L F + IDEAAQAL
Sbjct: 317 AARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRRFTTLFIDEAAQAL 376
Query: 383 EIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQ 442
E ACWIA+ K R I AGDH QLPPT++ +EA + GL +TL E++A E S+L VQ
Sbjct: 377 EAACWIAIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVA-ANKQETVSLLKVQ 435
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK--------- 492
YRMH+ IM +SS+ Y +++A P R + + ID + + E+
Sbjct: 436 YRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLDLPMSWIDTSEMEFHEEFIGESFGRI 495
Query: 493 -KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK-- 549
K E + + E EA + KR+++ + D G+I+PY AQV L+ KLK
Sbjct: 496 NKPEANLLLQELEAYIRKIGEKRVLEERI---DFGLISPYKAQVQYLR------GKLKGC 546
Query: 550 --------NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
+ + TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR +
Sbjct: 547 SFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLV 606
Query: 602 LVCDTETVSSDGFLKRLIEY 621
++ D T+S F K+LI Y
Sbjct: 607 ILGDAVTMSKHAFYKKLIGY 626
>gi|298479725|ref|ZP_06997925.1| DNA helicase [Bacteroides sp. D22]
gi|298274115|gb|EFI15676.1| DNA helicase [Bacteroides sp. D22]
Length = 649
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 176/499 (35%), Positives = 272/499 (54%), Gaps = 24/499 (4%)
Query: 138 LRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNL 197
L ++ +E +YR M +AL + N A L +L G QKP + P+ L
Sbjct: 155 LGIQLYFDETSYRAMFEALEDTIRAKDNR-LAELRDILLGTQKPGFRELYPVRFPW---L 210
Query: 198 DHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIV 257
+ +Q+ A++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I
Sbjct: 211 NSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWIC 270
Query: 258 ERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKD 317
E+LV V ++R+G+P R+ ++L S + + IRK ++ + G ++
Sbjct: 271 EKLVDRGVPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGIRKSIREM-GSRMRRGS 329
Query: 318 KNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDE 377
+ R ++ + L + + D+ +A V+ +TL + R L+ F + IDE
Sbjct: 330 YSEREGMRNRMSRLRDRATELEIQINADLFDSARVIASTLVSSNHRLLNGRRFSTLFIDE 389
Query: 378 AAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS 437
AAQALE ACWIA+ K R ILAGDH QLPPT++ +EA + GL TL E++ V S
Sbjct: 390 AAQALEAACWIAIRKADRVILAGDHCQLPPTIKCIEASRGGLDHTLMEKVVQQKPSAV-S 448
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEE----- 491
+L VQYRMHE IM + S Y+ +++A P R + + ID + D E
Sbjct: 449 LLKVQYRMHETIMQFPSDWFYHGELEAAPEVRYRGILDFDTPMNWIDTSEMDFHEDFVGE 508
Query: 492 -----KKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDD 546
K E + + E E + +R++ + D G+I+PY AQV L+
Sbjct: 509 SFGRINKQEANLLLQELETYIERIGKERILDERI---DFGLISPYKAQVQYLRGKIKGSS 565
Query: 547 KLKNME----VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCL 602
L+ V+TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR + +
Sbjct: 566 FLRPFRSLITVNTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLVI 625
Query: 603 VCDTETVSSDGFLKRLIEY 621
+ DT T++ F KRL+ +
Sbjct: 626 LGDTSTLAKHPFYKRLMLF 644
>gi|336403156|ref|ZP_08583876.1| hypothetical protein HMPREF0127_01189 [Bacteroides sp. 1_1_30]
gi|335946894|gb|EGN08690.1| hypothetical protein HMPREF0127_01189 [Bacteroides sp. 1_1_30]
Length = 645
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 175/492 (35%), Positives = 269/492 (54%), Gaps = 24/492 (4%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + N A L +L G QKP + P+ L+ +Q+ A
Sbjct: 158 DETSYRAMFEALEDTIRAKDNR-LAELRDILLGTQKPGFRELYPVRFPW---LNSTQETA 213
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 214 VNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWICEKLVDRG 273
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L S + + IRK ++ + G ++ + R +
Sbjct: 274 VPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGIRKSIREM-GSRMRRGSYSEREGM 332
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
+ + L + + D+ +A V+ +TL + R L+ F + IDEAAQALE
Sbjct: 333 RNRMSRLRDRATELEIQINADLFDSARVIASTLVSSNHRLLNGRRFSTLFIDEAAQALEA 392
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R ILAGDH QLPPT++ +EA + GL TL E++ V S+L VQYR
Sbjct: 393 ACWIAIRKADRVILAGDHCQLPPTIKCIEASRGGLDHTLMEKVVQQKPSAV-SLLKVQYR 451
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEE----------KK 493
MHE IM + S Y+ +++A P R + + ID + D E K
Sbjct: 452 MHETIMQFPSDWFYHGELEAAPEVRYRGILDFDTPMNWIDTSEMDFHEDFVGESFGRINK 511
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNME- 552
E + + E E + +R++ + D G+I+PY AQV L+ L+
Sbjct: 512 QEANLLLQELETYIERIGKERILDERI---DFGLISPYKAQVQYLRGKIKGSSFLRPFRS 568
Query: 553 ---VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
V+TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR + ++ DT T+
Sbjct: 569 LITVNTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLVILGDTSTL 628
Query: 610 SSDGFLKRLIEY 621
+ F KRL+ +
Sbjct: 629 AKHPFYKRLMLF 640
>gi|325268516|ref|ZP_08135146.1| helicase [Prevotella multiformis DSM 16608]
gi|324989044|gb|EGC20997.1| helicase [Prevotella multiformis DSM 16608]
Length = 654
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 185/520 (35%), Positives = 288/520 (55%), Gaps = 60/520 (11%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +Y+ M DAL + K N A L + QK P+ L+ +Q+ A
Sbjct: 145 DETSYQMMFDALDRTMKAKGN-RLAYLRDLFCSRQKAERFSFSSIRLPW---LNPAQERA 200
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
+++ L +K+V ++HGPPGTGKTTT+VE I + + R S++L CA SN+AVD I E+L+
Sbjct: 201 VNEVLWAKDVAVVHGPPGTGKTTTLVEAINETLMRESQVLVCAQSNMAVDWISEKLIDRG 260
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
+ ++R+G+P R+ ++L + + + IRK ++ L N +R
Sbjct: 261 INVLRIGNPTRVNDKMLGFTYERKFEAHPDYPQLWSIRKAIRELR--------NNRKRGS 312
Query: 325 QKELRTLSKEERKRQQLAV---TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQA 381
+ + + + + + +L + T + A VV +TL GA SR ++ F + IDEAAQA
Sbjct: 313 ESYHQKMDRLKSRATELEIRIHTSLFGEARVVASTLAGAGSRVMEGQKFTTLFIDEAAQA 372
Query: 382 LEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTV 441
LE ACWIA+ + SR ILAGDH QLPPTV+S+ A + GLG+TL ER+ + EV ++L V
Sbjct: 373 LEAACWIAIRRASRVILAGDHCQLPPTVKSIAALRGGLGKTLMERIVE-NKREVVTLLKV 431
Query: 442 QYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIA--------GCDMEEK 492
QYRM+E IM +SS Y +++A P R + ++ ID + G +E
Sbjct: 432 QYRMNEDIMRFSSDWFYGGQVEAAPQIKYRGILDYDNPMVWIDTSDEAVTSAYGLAADES 491
Query: 493 --------KDEEDS-----------TMNEGEAEVAMAHAK---------RLIQSGVHASD 524
KD+ED+ +N+GEAE+ + K R++ + D
Sbjct: 492 KTPFPLSGKDQEDAFHEQFVGSSFGRINKGEAELTLKTLKDYFTKIGRQRVLDERI---D 548
Query: 525 IGIITPYAAQVVLLKILRSKDDKLKN----MEVSTVDGFQGREKEAIIISMVRSNSKKEV 580
+GII+PY AQV L+ L K + K + V+TVDGFQG+E++ I+IS+VRSN + ++
Sbjct: 549 VGIISPYRAQVQYLRSLIKKREFFKPYRSLVSVNTVDGFQGQERDVILISLVRSNEEGQI 608
Query: 581 GFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
GFL D RRMNVA+TRAR + ++ + T++ F K+L +
Sbjct: 609 GFLRDLRRMNVAITRARMKLIILGNARTMTRHAFYKKLWD 648
>gi|60683002|ref|YP_213146.1| DNA-binding protein [Bacteroides fragilis NCTC 9343]
gi|60494436|emb|CAH09232.1| putative DNA-binding protein [Bacteroides fragilis NCTC 9343]
Length = 634
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 177/500 (35%), Positives = 278/500 (55%), Gaps = 40/500 (8%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK-PFNSNLDHSQKD 203
+E +YR M +AL + + N A L +L +Q P+ + + P+ L+ +Q+
Sbjct: 144 DETSYRTMFEALEDVIRAKGN-RLAELRDILLSKQ-PSCWRATYPVRFPW---LNSTQEA 198
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A++K L +K+V ++HGPPGTGKTTT+VE I + + R +++L CA SN AVD I E+LV
Sbjct: 199 AVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWIAEKLVDR 258
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
V ++R+G+P+R+ ++L + + + IRK ++ + ++ K+ + RE
Sbjct: 259 GVPVLRIGNPSRVNDKMLSFTYERRFEGHPAYTELWGIRKSIREMGNRMRKSS--YSERE 316
Query: 324 IQKELRTLSKEERKRQQLAVT-DVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQAL 382
+ +E ++ + D+ A V+ +TL + R L F + IDEAAQAL
Sbjct: 317 AARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRRFTTLFIDEAAQAL 376
Query: 383 EIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQ 442
E ACWIA+ K R I AGDH QLPPT++ +EA + GL +TL E++A E S+L VQ
Sbjct: 377 EAACWIAIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVA-ANKQETVSLLKVQ 435
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK--------- 492
YRMH+ IM +SS+ Y +++A P R + + ID + + E+
Sbjct: 436 YRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLDLPMSWIDTSEMEFHEEFVGESFGRI 495
Query: 493 -KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK-- 549
K E + + E EA + KR+++ + D G+I+PY AQV L+ KLK
Sbjct: 496 NKPEANLLLQELEAYIRKIGEKRVLEERI---DFGLISPYKAQVQYLR------GKLKGC 546
Query: 550 --------NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
+ + TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR +
Sbjct: 547 LFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLV 606
Query: 602 LVCDTETVSSDGFLKRLIEY 621
++ D T+S F K+LI Y
Sbjct: 607 ILGDAVTMSKHAFYKKLIGY 626
>gi|423298652|ref|ZP_17276707.1| hypothetical protein HMPREF1070_05372 [Bacteroides ovatus
CL03T12C18]
gi|392662021|gb|EIY55587.1| hypothetical protein HMPREF1070_05372 [Bacteroides ovatus
CL03T12C18]
Length = 645
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 175/492 (35%), Positives = 268/492 (54%), Gaps = 24/492 (4%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + N A L +L G QKP + P+ L+ +Q+ A
Sbjct: 158 DETSYRAMFEALEDTIRAKDNR-LAELRDILLGTQKPGFRELYPVRFPW---LNSTQETA 213
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 214 VNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWICEKLVDRG 273
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L S + + IRK ++ + G ++ + R +
Sbjct: 274 VAVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGIRKSIREM-GSRMRRGSYSEREGM 332
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
+ + L + + D+ +A V+ +TL + R L+ F + IDEAAQALE
Sbjct: 333 RNRMSRLRDRATELEIQINADLFDSARVIASTLVSSNHRLLNGRRFPTLFIDEAAQALEA 392
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R ILAGDH QLPPT++ +EA + GL TL E++ V S+L VQYR
Sbjct: 393 ACWIAIRKADRVILAGDHCQLPPTIKCIEASRGGLDHTLMEKVVQQKPSAV-SLLKVQYR 451
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEE----------KK 493
MHE IM + S Y+ +++A P R + + ID + D E K
Sbjct: 452 MHEAIMQFPSDWFYHGELEAAPEVRYRGILDFDTPMNWIDTSEMDFHEDFVGESFGRINK 511
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNME- 552
E + + E E + KR++ + D G+I+PY AQV L+ L+
Sbjct: 512 QEANLLLQELETYIERIGKKRILDERI---DFGLISPYKAQVQYLRGKIKGSSFLRPFRS 568
Query: 553 ---VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
V+TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR + ++ D T+
Sbjct: 569 LITVNTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLVILGDASTL 628
Query: 610 SSDGFLKRLIEY 621
+ F KRL+ +
Sbjct: 629 TKHPFYKRLMLF 640
>gi|345507626|ref|ZP_08787273.1| hypothetical protein BSAG_02536 [Bacteroides sp. D1]
gi|345455366|gb|EEO50825.2| hypothetical protein BSAG_02536 [Bacteroides sp. D1]
Length = 645
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 175/492 (35%), Positives = 269/492 (54%), Gaps = 24/492 (4%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + N A L +L G QKP + P+ L+ +Q+ A
Sbjct: 158 DETSYRAMFEALEDTIRAKDNR-LAELRDILLGTQKPGFRELYPVRFPW---LNSTQETA 213
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 214 VNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWICEKLVDRG 273
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L S + + IRK ++ + G ++ + R +
Sbjct: 274 VPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGIRKSIREM-GSRMRRGSYSEREGM 332
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
+ + L + + D+ +A V+ +TL + R L+ F + IDEAAQALE
Sbjct: 333 RNRMSRLRDRATELEIQINADLFDSARVIASTLVSSNHRLLNGRRFPTLFIDEAAQALEA 392
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R ILAGDH QLPPT++ +EA + GL TL E++ V S+L VQYR
Sbjct: 393 ACWIAIRKADRVILAGDHCQLPPTIKCIEASRGGLDHTLMEKVVQQKPSAV-SLLKVQYR 451
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEE----------KK 493
MHE IM + S Y+ +++A P R + + ID + D E K
Sbjct: 452 MHETIMQFPSDWFYHGELEAAPEVRYRGILDFDTPMNWIDTSEMDFHEDFVGESFGRINK 511
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNME- 552
E + + E E + +R++ + D G+I+PY AQV L+ L+
Sbjct: 512 QEANLLLQELETYIERIGKERILDERI---DFGLISPYKAQVQYLRGKIKGSSFLRPFRS 568
Query: 553 ---VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
V+TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR + ++ DT T+
Sbjct: 569 LITVNTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLVILGDTSTL 628
Query: 610 SSDGFLKRLIEY 621
+ F KRL+ +
Sbjct: 629 AKHPFYKRLMLF 640
>gi|262407014|ref|ZP_06083563.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294805767|ref|ZP_06764646.1| putative DNA helicase [Bacteroides xylanisolvens SD CC 1b]
gi|262355717|gb|EEZ04808.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294447090|gb|EFG15678.1| putative DNA helicase [Bacteroides xylanisolvens SD CC 1b]
Length = 649
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 175/492 (35%), Positives = 269/492 (54%), Gaps = 24/492 (4%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + N A L +L G QKP + P+ L+ +Q+ A
Sbjct: 162 DETSYRAMFEALEDTIRAKDNR-LAELRDILLGTQKPGFRELYPVRFPW---LNSTQETA 217
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 218 VNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWICEKLVDRG 277
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L S + + IRK ++ + G ++ + R +
Sbjct: 278 VPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGIRKSIREM-GSRMRRGSYSEREGM 336
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
+ + L + + D+ +A V+ +TL + R L+ F + IDEAAQALE
Sbjct: 337 RNRMSRLRDRATELEIQINADLFDSARVIASTLVSSNHRLLNGRRFPTLFIDEAAQALEA 396
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R ILAGDH QLPPT++ +EA + GL TL E++ V S+L VQYR
Sbjct: 397 ACWIAIRKADRVILAGDHCQLPPTIKCIEASRGGLDHTLMEKVVQQKPSAV-SLLKVQYR 455
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEE----------KK 493
MHE IM + S Y+ +++A P R + + ID + D E K
Sbjct: 456 MHETIMQFPSDWFYHGELEAAPEVRYRGILDFDTPMNWIDTSEMDFHEDFVGESFGRINK 515
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNME- 552
E + + E E + +R++ + D G+I+PY AQV L+ L+
Sbjct: 516 QEANLLLQELETYIERIGKERILDERI---DFGLISPYKAQVQYLRGKIKGSSFLRPFRS 572
Query: 553 ---VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
V+TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR + ++ DT T+
Sbjct: 573 LITVNTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLVILGDTSTL 632
Query: 610 SSDGFLKRLIEY 621
+ F KRL+ +
Sbjct: 633 AKHPFYKRLMLF 644
>gi|423270406|ref|ZP_17249377.1| hypothetical protein HMPREF1079_02459 [Bacteroides fragilis
CL05T00C42]
gi|423275362|ref|ZP_17254307.1| hypothetical protein HMPREF1080_02960 [Bacteroides fragilis
CL05T12C13]
gi|392698330|gb|EIY91512.1| hypothetical protein HMPREF1079_02459 [Bacteroides fragilis
CL05T00C42]
gi|392702843|gb|EIY95988.1| hypothetical protein HMPREF1080_02960 [Bacteroides fragilis
CL05T12C13]
Length = 634
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 177/500 (35%), Positives = 279/500 (55%), Gaps = 40/500 (8%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK-PFNSNLDHSQKD 203
+E +YR M +AL + + N A L +L +Q P+ ++ + P+ L+ +Q+
Sbjct: 144 DETSYRTMFEALEDVIRAKGN-RLAELRDILLSKQ-PSRWRETYPVRFPW---LNSTQEA 198
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A++K L +K+V ++HGPPGTGKTTT+VE I + + R +++L CA SN AVD I E+LV
Sbjct: 199 AVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWIAEKLVDR 258
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
V ++R+G+P+R+ ++L + + + IRK ++ + ++ K+ + RE
Sbjct: 259 GVPVLRIGNPSRVNDKMLSFTYERRFEGHPAYTELWGIRKSIREMGNRMRKSS--YSERE 316
Query: 324 IQKELRTLSKEERKRQQLAVT-DVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQAL 382
+ +E ++ + D+ A V+ +TL + R L F + IDEAAQAL
Sbjct: 317 AARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRRFTTLFIDEAAQAL 376
Query: 383 EIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQ 442
E ACWIA+ K R I AGDH QLPPT++ +EA + GL +TL E++A E S+L VQ
Sbjct: 377 EAACWIAIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVA-ANKQETVSLLKVQ 435
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK--------- 492
YRMH+ IM +SS+ Y +++A P R + + ID + + E+
Sbjct: 436 YRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLDLPMSWIDTSEMEFHEEFVGESFGRI 495
Query: 493 -KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK-- 549
K E + + E EA + KR+++ + D G+I+PY AQV L+ KLK
Sbjct: 496 NKPEANLLLQELEAYIRKIGEKRVLEERI---DFGLISPYKAQVQYLR------GKLKGC 546
Query: 550 --------NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
+ + TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR +
Sbjct: 547 LFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLV 606
Query: 602 LVCDTETVSSDGFLKRLIEY 621
++ D T+S F K+LI Y
Sbjct: 607 ILGDAVTMSKHAFYKKLIGY 626
>gi|398347439|ref|ZP_10532142.1| DNA and RNA helicase [Leptospira broomii str. 5399]
Length = 627
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 208/633 (32%), Positives = 325/633 (51%), Gaps = 47/633 (7%)
Query: 29 EKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHK 88
E+EAEI+ A+ ++ + G I + D++ G G + + TK +P
Sbjct: 15 EREAEIARYKEELANEDIGSRISSGICIYPIVFEDSEVGPEGNWRVHLRPTKARGVP-EA 73
Query: 89 FGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVT 148
F T V L +L S V+ + D S ++ +++P+ L LE L +E +
Sbjct: 74 FRTGGPVRLFKESEELTS------VLLKCSDDSYILSLEEVPDWLEEGKLGLEILPDETS 127
Query: 149 YRRMKDAL---IQLSKGVQNGPAAGLIPVLFGE--QKPTVLKKDIAFKPFNSNLDHSQKD 203
Y+ AL I +G + A L GE K ++ P L+ SQ+
Sbjct: 128 YKEWDRALHKIIHAERGTRTKFFADL---FLGEIELKFPNFAEEFGISP---ELNDSQRR 181
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
AIS L ++++ +LHGPPGTGKT T+ E I V RG K+L A +N A D + E L
Sbjct: 182 AISAILQTEDLILLHGPPGTGKTKTITEAIRILVDRGKKVLVSAPTNAATDLLAESLGRM 241
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTR-- 321
V +R+GHPAR+ VL +LDA + R + L ++E+ G+LLK K R
Sbjct: 242 GVSALRIGHPARMSESVLSVSLDANLNRHPDFKLIERDKREI----GELLKKAGKYKRTF 297
Query: 322 --------REIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLV 373
R + +E + L K ++RQ++ V ++++ V++ T TGA S LD +FD
Sbjct: 298 GREEAEERRRLYQEAKELRKGIKERQKVLVRYLLESHPVIVCTHTGASSSLLDKLNFDYA 357
Query: 374 IIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD-LYG 432
++DE +QA E A WI +L+ R ++AGD QLPPTV S E L L ERL D +
Sbjct: 358 VLDEGSQATEPASWIPILRAERIVIAGDPRQLPPTVLS---EDPLLKIPLMERLLDRMNS 414
Query: 433 DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEP--------TLLLIDI 484
+L QYRM + I ++ +++ Y ++ + +R+++ P + + ID
Sbjct: 415 VGRVYLLDTQYRMTDPIQSFPNRRFYAGRLVSGIPEEERSTNPFPSETPLFDSSFVFIDT 474
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL-KILRS 543
+G D E+ + S N EAE + KR+++SG D+ +I+PY Q LL +ILR
Sbjct: 475 SGTDSGEELFDA-SLGNRWEAEFTITILKRILESGWSPEDLVLISPYRYQRFLLEEILRK 533
Query: 544 K-DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCL 602
+ ++ +E+ TVD FQGREK+ +I S+VRSNS+ +GFLS+ RR NV +TRA+R L
Sbjct: 534 ELPIDVEKIEIETVDSFQGREKKGVIFSLVRSNSEGNIGFLSEERRWNVGMTRAKRLLVL 593
Query: 603 VCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
+ D T+ F + LI+ E E + E+L
Sbjct: 594 IGDGSTLGEQEFFQDLIQEAESCGEVRTAWEFL 626
>gi|345884981|ref|ZP_08836376.1| hypothetical protein HMPREF0666_02552 [Prevotella sp. C561]
gi|345042227|gb|EGW46333.1| hypothetical protein HMPREF0666_02552 [Prevotella sp. C561]
Length = 656
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 182/518 (35%), Positives = 287/518 (55%), Gaps = 56/518 (10%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN-SNLDHSQKD 203
+E +Y+ M DAL + K N A L + + QK + +F P L+ +Q+
Sbjct: 148 DETSYQMMFDALDRTMKAKGN-RLAYLRDLFYSRQKA----ERFSFAPIRLPWLNPTQEK 202
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A+++ L +K+V ++HGPPGTGKTTT+VE I + + R S+++ CA SN+AVD I E+LV
Sbjct: 203 AVNEVLWAKDVAVVHGPPGTGKTTTLVEAINETLMRESQVMVCAQSNMAVDWICEKLVDR 262
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
+ ++R+G+P R+ ++L + + + IRK ++ L + K + +
Sbjct: 263 GINVLRIGNPTRVNDKMLGFTYERKFEAHPDYPQLWSIRKAIRELRNN--RKKGSESYHQ 320
Query: 324 IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALE 383
L++ + E R ++ A VV +TL GA SR ++ F + IDEAAQALE
Sbjct: 321 KMDRLKSRATELEIRIN---AELFGEARVVASTLVGANSRIMEGQKFTTLFIDEAAQALE 377
Query: 384 IACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQY 443
ACWIA+ + SR I AGDH QLPPTV+S+ A + GLG+TL ER+ + EV ++L VQY
Sbjct: 378 AACWIAIRRASRIIFAGDHCQLPPTVKSIAALRGGLGKTLMERIVE-NKPEVVTLLKVQY 436
Query: 444 RMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLID------IAGCDMEEKK--- 493
RM+E IM +SS Y +++ P R + ++ ID +A D+ E +
Sbjct: 437 RMNEEIMRFSSDWFYGGQVETAPQIKYRGILDYDNPMVWIDTSDEAVVASYDLTESEANS 496
Query: 494 -------DEEDST-----------MNEGEAEVAMAH---------AKRLIQSGVHASDIG 526
D+E++ +N+GEAE+ + +R++ + D+G
Sbjct: 497 VPSQLSNDKENAFHEQFVGSSFGRINKGEAELTLKTLVDYFTKIGKQRVLDERI---DVG 553
Query: 527 IITPYAAQVVLLKILRSKDDKLKN----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGF 582
+I+PY AQV L+ L K K + V+TVDGFQG+E++ I+IS+VRSN ++GF
Sbjct: 554 VISPYRAQVQYLRSLIKKRAFFKPYRSLISVNTVDGFQGQERDVILISLVRSNDDGQIGF 613
Query: 583 LSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
L D RRMNVA+TRAR + ++ + +T++ F K+L E
Sbjct: 614 LRDLRRMNVAITRARMKLIILGNVQTMTKHEFYKKLWE 651
>gi|383112071|ref|ZP_09932871.1| hypothetical protein BSGG_3732 [Bacteroides sp. D2]
gi|382949144|gb|EFS33032.2| hypothetical protein BSGG_3732 [Bacteroides sp. D2]
Length = 645
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 175/492 (35%), Positives = 269/492 (54%), Gaps = 24/492 (4%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + N A L +L G QKP + P+ L+ +Q+ A
Sbjct: 158 DETSYRAMFEALEDTIRAKDNR-LAELRDILLGTQKPGFRELYPVRFPW---LNSTQETA 213
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 214 VNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWICEKLVDRG 273
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L S + + IRK ++ + G ++ + R +
Sbjct: 274 VPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGIRKSIREM-GSRMRRGSYSEREGM 332
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
+ + L + + D+ +A V+ +TL + R L+ F + IDEAAQALE
Sbjct: 333 RNRMSHLRDRATELEIQINADLFDSARVIASTLVSSNHRLLNGRRFPTLFIDEAAQALEA 392
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R ILAGDH QLPPT++ +EA + GL TL E++ V S+L VQYR
Sbjct: 393 ACWIAIRKADRVILAGDHCQLPPTIKCIEAARGGLDHTLMEKVVQQKPSAV-SLLKVQYR 451
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEE----------KK 493
MHE IM + S Y+ +++A P R + + ID + D E K
Sbjct: 452 MHEAIMQFPSDWFYHGELEAAPEVRYRGILDFDTPMNWIDTSEMDFHEDFVGESFGRINK 511
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNME- 552
E + + E EA + +R++ + D G+I+PY AQV L+ L+
Sbjct: 512 QEANLLLQELEAYIERIGKERILDERI---DFGLISPYKAQVQYLRGKIKGSSFLRPFRS 568
Query: 553 ---VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
V+TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR + ++ D T+
Sbjct: 569 LITVNTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLVILGDASTL 628
Query: 610 SSDGFLKRLIEY 621
+ F KRL+ +
Sbjct: 629 TKHPFYKRLMLF 640
>gi|440789574|gb|ELR10880.1| putative DNA helicase [Acanthamoeba castellanii str. Neff]
Length = 1656
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 207/618 (33%), Positives = 309/618 (50%), Gaps = 53/618 (8%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPAL 109
+K+G TI NL C L + +L+F D +P H+F D+V++ + D S
Sbjct: 161 EKEGQTIFNL-CARPVGHLFREEILQFAPAGSDFMPYHRFAHGDMVLM--TRTDPLSEKP 217
Query: 110 GQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDAL--------IQLSK 161
+GVV S + V D P RL+K AN V++ RM DAL I+L
Sbjct: 218 MEGVVLDKSKSRLQVVVKDYPPNVSEGTWRLDKGANRVSHDRMIDALNKFTSNRNIELPD 277
Query: 162 GVQNGPAAGLI----------PVLFGEQKPTV-LKKDIAFKPFNSNLD-----HSQKDAI 205
V+ P ++ P + Q P L A K F N D SQ+ I
Sbjct: 278 TVKPIPGGTVLRDLIVGNVKDPKAWAAQPPPKELADRYARKNFPKNFDAWKLNESQRKVI 337
Query: 206 SKALSSKNVFMLHGPPGTGKTTTVVEI--ILQEVKRG-SKILACAASNIAVDNIVERLVP 262
+ L+ K + ++ GPPGTGKTT + + +L + RG + IL A +N+AVDN++E L
Sbjct: 338 TTILTRK-LTLVQGPPGTGKTTLAIHLMKLLVHLCRGHAPILCTADTNVAVDNLLEGLAD 396
Query: 263 HRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRR 322
VR VR+G P ++ ++ + +L+A + ++ +R+E+ L+ K R
Sbjct: 397 SGVRAVRVGRPVKIREELRDLSLEALMQEHAANNKLDALRQELAGLS----HGKTPEERA 452
Query: 323 EIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQAL 382
++E TL + R+ + DV+ ADV+ T GA L + +F +VI+DE+ QA
Sbjct: 453 AAKREGVTLHQNIRRLEDYIHNDVLGKADVICATCIGAGHDLLASRAFPIVILDESTQAT 512
Query: 383 EIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTV 441
E A AL+ S+ +L GDH QLPPTV S EA++ GL +LF R+ + G E ML +
Sbjct: 513 EPASLCALVHNSQHVVLLGDHYQLPPTVTSPEAQQGGLSESLFARMIAM-GIE-PYMLEI 570
Query: 442 QYRMHEHIMNWSSKQLYNSKIK--------AHPSGVKRTSSTEPTLLLIDIAGCDMEEKK 493
QYRMH I + S Y KIK P+G+ S P + +++ G + +
Sbjct: 571 QYRMHPIISEFPSVHFYGGKIKDGIVAAQRPSPTGIAWPSEGNP-IAFVNVDGYEKQSTD 629
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRS------KDDK 547
EGEA + A DIG+ITPY QV L L S K++K
Sbjct: 630 GYSWFNSAEGEAVFQLVSAFDQRSDVGDVKDIGVITPYNGQVKHLADLFSRRGGMNKNEK 689
Query: 548 LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTE 607
+ +++VDG+QGREKE II + VRSNS+ +VGFL D RR+NVA+TRARR +V +
Sbjct: 690 WHKLNINSVDGYQGREKEVIIFTAVRSNSRGDVGFLRDWRRLNVALTRARRGLLVVGNRR 749
Query: 608 TVSSDGFLKRLIEYFEEH 625
T+ SD + + + + H
Sbjct: 750 TLQSDEHWGKWLRWIDTH 767
>gi|281421454|ref|ZP_06252453.1| DNA helicase [Prevotella copri DSM 18205]
gi|281404526|gb|EFB35206.1| DNA helicase [Prevotella copri DSM 18205]
Length = 688
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 184/534 (34%), Positives = 290/534 (54%), Gaps = 61/534 (11%)
Query: 137 PLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN-S 195
P+ ++ +E +Y+ M +AL ++ K +N A L + + QK +F+P
Sbjct: 163 PIGVQLSFDETSYKLMFEALDRVMKA-KNNRLAYLRDLFYSHQKAG----RFSFEPMKFP 217
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDN 255
L+ +Q+ A+++ L +K+V ++HGPPGTGKTTT+VE I + + R +++L CA SN+AVD
Sbjct: 218 WLNPTQERAVNEVLWAKDVAIVHGPPGTGKTTTLVEAINETLMRETQVLVCAQSNMAVDW 277
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
I E+LV + ++R+G+P R+ ++L + + + IRK ++ L K
Sbjct: 278 ISEKLVDRGINVLRIGNPTRVNDKMLGFTYERRFESHADYPQLWAIRKAIRELR----KN 333
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVII 375
+ K + QK R S+ ++ ++ A V+ TL G+ L+ F + I
Sbjct: 334 RKKGSENYHQKMDRLKSRAAEIELRIN-AELFGEARVIACTLVGSAHHLLEGMKFGTLFI 392
Query: 376 DEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEV 435
DEAAQALE ACWI + + SR ILAGDH QLPPTV+S+ A + GLG+TL ER+A+ EV
Sbjct: 393 DEAAQALEAACWIPMRRASRVILAGDHCQLPPTVKSIAALRAGLGKTLMERIAE-NKPEV 451
Query: 436 TSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT--SSTEPTLLL--------IDIA 485
++L +QYRM++ IM +SS Y K+++ P R+ P + I I
Sbjct: 452 VTLLKIQYRMNDEIMRFSSDWFYGGKVESAPQIKYRSVLDYDHPITWIDTSNEENQITIE 511
Query: 486 GCDMEEKKD-----------------------EEDSTMNEGEAEVAM---------AHAK 513
G D E E +N+ EAE+ + +
Sbjct: 512 GEDAPEDSVSTSSSVSAANQNSDLNFKEQFVGESFGRINKAEAELTLLTLAEYFTKIGKQ 571
Query: 514 RLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN----MEVSTVDGFQGREKEAIII 569
R+++ + D+GII+PY AQV LK L K + K + V+TVDGFQG+E++ I+I
Sbjct: 572 RVLEERI---DVGIISPYRAQVQYLKKLIKKYEFFKPYRRLISVNTVDGFQGQERDVILI 628
Query: 570 SMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFE 623
S+VRSN + ++GFL D RRMNVA+TRAR + ++ + +T++ F K+L EY E
Sbjct: 629 SLVRSNDEGQIGFLKDLRRMNVAMTRARMKLIILGNKDTMTKHPFYKKLWEYVE 682
>gi|440794946|gb|ELR16091.1| hypothetical protein ACA1_224920 [Acanthamoeba castellanii str.
Neff]
Length = 1615
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 207/618 (33%), Positives = 309/618 (50%), Gaps = 53/618 (8%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPAL 109
+K+G TI NL C L + +L+F D +P H+F D+V++ + D S
Sbjct: 160 EKEGQTIFNL-CARPVGHLFREEILQFAPAGSDFMPYHRFAHGDMVLM--TRTDPLSEKP 216
Query: 110 GQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDAL--------IQLSK 161
+GVV S + V D P RL+K AN V++ RM DAL I+L
Sbjct: 217 MEGVVLDKSKSRLQVVVKDYPPNVSEGTWRLDKGANRVSHDRMIDALNKFTSNRNIELPD 276
Query: 162 GVQNGPAAGLI----------PVLFGEQKPTV-LKKDIAFKPFNSNLD-----HSQKDAI 205
V+ P ++ P + Q P L A K F N D SQ+ I
Sbjct: 277 TVKPIPGGTVLRDLIVGNVKDPKAWAAQPPPKELADRYARKNFPKNFDAWKLNESQRKVI 336
Query: 206 SKALSSKNVFMLHGPPGTGKTTTVVEI--ILQEVKRG-SKILACAASNIAVDNIVERLVP 262
+ L+ K + ++ GPPGTGKTT + + +L + RG + IL A +N+AVDN++E L
Sbjct: 337 TTILTRK-LTLVQGPPGTGKTTLAIHLMKLLVHLCRGHAPILCTADTNVAVDNLLEGLAD 395
Query: 263 HRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRR 322
VR VR+G P ++ ++ + +L+A + ++ +R+E+ L+ K R
Sbjct: 396 SGVRAVRVGRPVKIREELRDLSLEALMQEHAANNKLDALRQELAGLS----HGKTPEERA 451
Query: 323 EIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQAL 382
++E TL + R+ + DV+ ADV+ T GA L + +F +VI+DE+ QA
Sbjct: 452 AAKREGVTLHQNIRRLEDYIHNDVLGKADVICATCIGAGHDLLASRAFPIVILDESTQAT 511
Query: 383 EIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTV 441
E A AL+ S+ +L GDH QLPPTV S EA++ GL +LF R+ + G E ML +
Sbjct: 512 EPASLCALVHNSQHVVLLGDHYQLPPTVTSPEAQQGGLSESLFARMIAM-GIE-PYMLEI 569
Query: 442 QYRMHEHIMNWSSKQLYNSKIK--------AHPSGVKRTSSTEPTLLLIDIAGCDMEEKK 493
QYRMH I + S Y KIK P+G+ S P + +++ G + +
Sbjct: 570 QYRMHPIISEFPSVHFYGGKIKDGIVAAQRPSPTGIAWPSEGNP-IAFVNVDGYEKQSTD 628
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRS------KDDK 547
EGEA + A DIG+ITPY QV L L S K++K
Sbjct: 629 GYSWFNSAEGEAVFQLVSAFDQRSDVGDVKDIGVITPYNGQVKHLADLFSRRGGMNKNEK 688
Query: 548 LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTE 607
+ +++VDG+QGREKE II + VRSNS+ +VGFL D RR+NVA+TRARR +V +
Sbjct: 689 WHKLNINSVDGYQGREKEVIIFTAVRSNSRGDVGFLRDWRRLNVALTRARRGLLVVGNRR 748
Query: 608 TVSSDGFLKRLIEYFEEH 625
T+ SD + + + + H
Sbjct: 749 TLQSDEHWGKWLRWIDTH 766
>gi|336410631|ref|ZP_08591107.1| hypothetical protein HMPREF1018_03124 [Bacteroides sp. 2_1_56FAA]
gi|335944206|gb|EGN06030.1| hypothetical protein HMPREF1018_03124 [Bacteroides sp. 2_1_56FAA]
Length = 634
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 176/500 (35%), Positives = 279/500 (55%), Gaps = 40/500 (8%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK-PFNSNLDHSQKD 203
+E +YR M +AL + + + A L +L +Q P+ ++ + P+ L+ +Q+
Sbjct: 144 DETSYRTMFEALEDVIR-TKGNRLAELRDILLSKQ-PSRWRETYPVRFPW---LNSTQEA 198
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A++K L +K+V ++HGPPGTGKTTT+VE I + + R +++L CA SN AVD I E+LV
Sbjct: 199 AVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWIAEKLVDR 258
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
V ++R+G+P+R+ ++L + + + IRK ++ + ++ K+ + RE
Sbjct: 259 GVPVLRIGNPSRVNDKMLSFTYERRFEGHPAYTELWGIRKSIREMGNRMRKSS--YSERE 316
Query: 324 IQKELRTLSKEERKRQQLAVT-DVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQAL 382
+ +E ++ + D+ A V+ +TL + R L F + IDEAAQAL
Sbjct: 317 AARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRRFTTLFIDEAAQAL 376
Query: 383 EIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQ 442
E ACWIA+ K R I AGDH QLPPT++ +EA + GL +TL E++A E S+L VQ
Sbjct: 377 EAACWIAIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVA-ANKQETVSLLKVQ 435
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK--------- 492
YRMH+ IM +SS+ Y +++A P R + + ID + + E+
Sbjct: 436 YRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLDLPMSWIDTSEMEFHEEFVGESFGRI 495
Query: 493 -KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK-- 549
K E + + E EA + KR+++ + D G+I+PY AQV L+ KLK
Sbjct: 496 NKPEANLLLQELEAYIRKIGEKRVLEERI---DFGLISPYKAQVQYLR------GKLKGC 546
Query: 550 --------NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
+ + TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR +
Sbjct: 547 LFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLV 606
Query: 602 LVCDTETVSSDGFLKRLIEY 621
++ D T+S F K+LI Y
Sbjct: 607 ILGDAVTMSKHAFYKKLIGY 626
>gi|302345999|ref|YP_003814352.1| hypothetical protein HMPREF0659_A6297 [Prevotella melaninogenica
ATCC 25845]
gi|302149083|gb|ADK95345.1| conserved hypothetical protein [Prevotella melaninogenica ATCC
25845]
Length = 656
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 181/518 (34%), Positives = 283/518 (54%), Gaps = 56/518 (10%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN-SNLDHSQKD 203
+E +Y+ M DAL + K N A L + + QK + +F P L+ +Q+
Sbjct: 148 DETSYQMMFDALDRTMKAKGN-RLAYLRDLFYSRQKA----EKFSFAPIRLPWLNPTQEK 202
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A+++ L +K+V ++HGPPGTGKTTT+VE I + + R S+++ CA SN+AVD I E+LV
Sbjct: 203 AVNEVLWAKDVAVVHGPPGTGKTTTLVEAINETLMRESQVMVCAQSNMAVDWICEKLVDR 262
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
+ ++R+G+P R+ ++L + + + IRK ++ L K+ + ++
Sbjct: 263 GINVLRIGNPTRVNDKMLGFTYERKFEAHPDYPQLWSIRKAIRELRNNRKKSSESYHQKM 322
Query: 324 IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALE 383
+ + R E R +L A VV +TL GA SR ++ F + IDEAAQALE
Sbjct: 323 DRLKSRATELEIRINAEL-----FGEARVVASTLVGANSRIMEGQKFTTLFIDEAAQALE 377
Query: 384 IACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQY 443
ACWIA+ + SR I AGDH QLPPTV+S+ A + GLG+TL ER+ + EV ++L VQY
Sbjct: 378 AACWIAIRRASRVIFAGDHCQLPPTVKSIAALRGGLGKTLMERIVE-NKPEVVTLLKVQY 436
Query: 444 RMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLID------IAGCDMEEKKDEE 496
RM+E IM +SS Y +++ P R + ++ ID +A D+ E +
Sbjct: 437 RMNEEIMRFSSDWFYGGQVETAPQIKYRGILDYDNPMVWIDTSDEAVVASYDLTESEANS 496
Query: 497 DST---------------------MNEGEAEVAMAH---------AKRLIQSGVHASDIG 526
+ +N+GEAE+ + +R++ + D+G
Sbjct: 497 APSQLNNDRGNAFHEQFVGSSFGRINKGEAELTLKTLVDYFTKIGKQRVLNERI---DVG 553
Query: 527 IITPYAAQVVLLKILRSKDDKLKN----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGF 582
+I+PY AQV L+ L K K + V+TVDGFQG+E++ I+IS+VRSN ++GF
Sbjct: 554 VISPYRAQVQYLRSLIKKRAFFKPYRSLISVNTVDGFQGQERDVILISLVRSNDDGQIGF 613
Query: 583 LSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
L D RRMNVA+TRAR + ++ + +T++ F K+L E
Sbjct: 614 LRDLRRMNVAITRARMKLIILGNVQTMTKHEFYKKLWE 651
>gi|293373939|ref|ZP_06620281.1| putative DNA helicase [Bacteroides ovatus SD CMC 3f]
gi|292631160|gb|EFF49796.1| putative DNA helicase [Bacteroides ovatus SD CMC 3f]
Length = 649
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 180/507 (35%), Positives = 273/507 (53%), Gaps = 54/507 (10%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + N A L +L G QKP + P+ L+ +Q+ A
Sbjct: 162 DETSYRAMFEALEDTIRAKDNR-LAELRDILLGTQKPGFRELYPVRFPW---LNSTQETA 217
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 218 VNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWICEKLVDRG 277
Query: 265 VRLVRLGHPARLLPQVLESALDAQV--------LRGDNSS---LASDIRK----EMKALN 309
V ++R+G+P R+ ++L S + + L G + S + S +R+ E + +
Sbjct: 278 VPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGIHKSIREMGSRMRRGSYSEREGMR 337
Query: 310 GKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS 369
++ + +D+ T EIQ D+ +A V+ +TL + R L+
Sbjct: 338 NRMSRLRDRATELEIQIN----------------ADLFDSARVIASTLVSSNHRLLNGRR 381
Query: 370 FDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
F + IDEAAQALE ACWIA+ K R ILAGDH QLPPT++ +EA + GL TL E++
Sbjct: 382 FPTLFIDEAAQALEAACWIAIRKADRVILAGDHCQLPPTIKCIEASRGGLDHTLMEKVVQ 441
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCD 488
V S+L VQYRMHE IM + S Y+ +++A P R + + ID + D
Sbjct: 442 QKPSAV-SLLKVQYRMHEAIMQFPSDWFYHGELEAAPEVRYRGILDFDTPMNWIDTSEMD 500
Query: 489 MEE----------KKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL 538
E K E + + E E + KR++ + D G+I+PY AQV L
Sbjct: 501 FHEDFVGESFGRINKQEANLLLQELETYIERIGKKRILDERI---DFGLISPYKAQVQYL 557
Query: 539 KILRSKDDKLKNME----VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
+ L+ V+TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+T
Sbjct: 558 RGKIKGSSFLRPFRSLITVNTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAIT 617
Query: 595 RARRQCCLVCDTETVSSDGFLKRLIEY 621
RAR + ++ D T++ F KRL+ +
Sbjct: 618 RARMKLVILGDASTLAKHPFYKRLMLF 644
>gi|423215342|ref|ZP_17201869.1| hypothetical protein HMPREF1074_03401 [Bacteroides xylanisolvens
CL03T12C04]
gi|392691910|gb|EIY85150.1| hypothetical protein HMPREF1074_03401 [Bacteroides xylanisolvens
CL03T12C04]
Length = 645
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 174/492 (35%), Positives = 268/492 (54%), Gaps = 24/492 (4%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + N A L +L G QKP + P+ L+ +Q+ A
Sbjct: 158 DETSYRAMFEALEDTIRAKDNR-LAELRDILLGTQKPGFRELYPVRFPW---LNSTQETA 213
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 214 VNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWICEKLVDRG 273
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L S + + IRK ++ + G ++ + R +
Sbjct: 274 VPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGIRKSIREM-GSRMRRGSYSEREGM 332
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
+ + L + + D+ +A V+ +TL + R L+ F + IDEAAQALE
Sbjct: 333 RNRMSRLRDRATELEIQINADLFDSARVIASTLVSSNHRLLNGRRFPTLFIDEAAQALEA 392
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R ILAGDH QLPPT++ +EA + GL TL E++ V S+L VQYR
Sbjct: 393 ACWIAIRKADRVILAGDHCQLPPTIKCIEASRGGLDHTLMEKVVQQKPSAV-SLLKVQYR 451
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEE----------KK 493
MHE IM + S Y+ +++A P R + + ID + D E K
Sbjct: 452 MHETIMQFPSDWFYHGELEAAPEVRYRGILDFDTPMNWIDTSEMDFHEDFVGESFGRINK 511
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNME- 552
E + + E E + +R++ + D G+I+PY AQV L+ L+
Sbjct: 512 QEANLLLQELETYIERIGKERILDERI---DFGLISPYKAQVQYLRGKIKGSSFLRPFRS 568
Query: 553 ---VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
V+TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR + ++ D T+
Sbjct: 569 LITVNTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLVILGDASTL 628
Query: 610 SSDGFLKRLIEY 621
+ F KRL+ +
Sbjct: 629 AKHPFYKRLMLF 640
>gi|340346996|ref|ZP_08670112.1| DNA helicase [Prevotella dentalis DSM 3688]
gi|433652214|ref|YP_007278593.1| hypothetical protein Prede_1241 [Prevotella dentalis DSM 3688]
gi|339610499|gb|EGQ15349.1| DNA helicase [Prevotella dentalis DSM 3688]
gi|433302747|gb|AGB28563.1| hypothetical protein Prede_1241 [Prevotella dentalis DSM 3688]
Length = 675
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 183/527 (34%), Positives = 286/527 (54%), Gaps = 53/527 (10%)
Query: 137 PLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN-S 195
PL ++ +E +YR M AL ++ K G + LF P + F P +
Sbjct: 153 PLGVQLSFDETSYRAMFSALDRVIKA--KGNRMAYLRDLFYSHIPA---QRFTFAPMSFP 207
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDN 255
L+ +Q+ A+++ L +K+V ++HGPPGTGKTTT+VE I + + R S++L CA SN+AVD
Sbjct: 208 WLNVTQERAVNEVLRAKDVEVVHGPPGTGKTTTLVEAINETLMRESQVLVCAQSNMAVDW 267
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
I E+LV + ++R+G+P R+ ++L + + + IRK ++ L K K
Sbjct: 268 ISEKLVDRGINVLRIGNPTRVNDKMLGFTYERRFEAHPDYPQLWAIRKAIRELRKKR-KG 326
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVII 375
+D++ +++++ L++ + E R ++ A V+ +TL GA SR L+ F + I
Sbjct: 327 RDESYHQKMER-LKSRATELEIRIN---AELFGEARVIASTLVGADSRLLEGQKFSTLFI 382
Query: 376 DEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEV 435
DEAAQALE ACWI + + SR +LAGDH QLPPTV+S+ A K GLG+TL ER+ + E
Sbjct: 383 DEAAQALEAACWIPIRRVSRVVLAGDHCQLPPTVKSIAAMKAGLGKTLMERIVE-QKPEC 441
Query: 436 TSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDM----- 489
++L VQYRM E IM++SS+ Y +++ P R E ID A +
Sbjct: 442 VTLLQVQYRMREEIMHFSSEWFYGGRVETAPQAKHRGILDLENPFTWIDTAPPQLSPAGE 501
Query: 490 -------------------------EEKKDEEDSTMNEGEAEVAM-AHAKRLIQSGVH-- 521
E+ E +N GEA + + A ++ G
Sbjct: 502 VEQVPHKNIGDSLLPEGLGKASDFSEQFVGESYGRVNRGEAFLTLDALQDYFVKIGRQRI 561
Query: 522 ---ASDIGIITPYAAQVVLLKILRSKDDKLKN----MEVSTVDGFQGREKEAIIISMVRS 574
D+G+I+PY AQV L+ L + + K + V+TVDGFQG+E++ I++SMVR+
Sbjct: 562 LDEKIDVGVISPYRAQVQYLRQLIKRREFFKPYRHLISVNTVDGFQGQERDIILVSMVRA 621
Query: 575 NSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEY 621
N + ++GFL D RRMNVA+TRAR + ++ + T++ F KRL Y
Sbjct: 622 NDQGQIGFLCDLRRMNVAITRARMKLIILGNAPTLTRHPFYKRLYTY 668
>gi|319957167|ref|YP_004168430.1| DNA helicase [Nitratifractor salsuginis DSM 16511]
gi|319419571|gb|ADV46681.1| DNA helicase [Nitratifractor salsuginis DSM 16511]
Length = 733
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 213/667 (31%), Positives = 337/667 (50%), Gaps = 90/667 (13%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
+++ LI+LE+EAE + I + + G IL L+ G TL +
Sbjct: 75 DYIEEYRQLIELEREAERRSRIEEIKRFSGRELESFGRAILGLR------GRRAGTLFDL 128
Query: 77 QSTK--GDVLPAHKFGTHDVVVL---KPNKADLGSPALGQGVVYRLKDSSITVAFDDIPE 131
+ D + D+V++ +P K+DL + +G G Y I +AF +P
Sbjct: 129 HLVRYGRDRRIETEISGGDIVLVSRGEPLKSDLSATVMGVGRNY------IELAFSQVPP 182
Query: 132 E-GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK-KDIA 189
+ L +RL+ N+VT++RM+ L + +P + + VL+ +
Sbjct: 183 KWALKEEVRLDLFVNDVTFKRMEKNLESMRH----------LPDPYRRLRDIVLELEPCG 232
Query: 190 FKPFN-----SNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKIL 244
P L+ Q +A+ ++L + +F++HGPPGTGKTTT+ +I +G IL
Sbjct: 233 EAPMAKIEEVEGLNEPQLEALRRSLGMEELFLIHGPPGTGKTTTLTRVIQAHASKGMHIL 292
Query: 245 ACAASNIAVDNIVERLVPH-RVRLVRLGHPAR---------LLPQVLESALDAQV----- 289
A A SN+AVDN++E+L +RL+R+GHPAR L+ Q+ E+ ++
Sbjct: 293 ATADSNVAVDNLLEKLAGDGDLRLIRVGHPARIDSSLERFSLMRQLTEAPEYQEIRELQR 352
Query: 290 -------------------LRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRT 330
LRG + + KE ++ G +T ++ R I+++ +T
Sbjct: 353 QAETAARERARYSKPTPARLRGMSRDRVLKLAKEGRSSRGVSAETI-RSMARWIEEDSKT 411
Query: 331 LSKEERKR--QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWI 388
ER R + ++ +++ ADVVL T + S L+ SFDL ++DE +Q +E + +
Sbjct: 412 EEAFERLRSLESATISRLLEAADVVLATNSMVGSDALEGMSFDLAVVDEGSQQIEPSTLL 471
Query: 389 ALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEH 448
LL+ R +LAGDH QLPPTV S + + L R+LFERL T ML VQYRMHE
Sbjct: 472 PLLRAPRGVLAGDHRQLPPTVLS---DLEILKRSLFERLISRKLVPAT-MLRVQYRMHET 527
Query: 449 IMNWSSKQLYNSKIKAHPSGVKRTSSTE---------PTLLLIDIAGCDMEEKK---DEE 496
IM++ ++ +Y+ + A PS +RT E P+ ++ +ME + +
Sbjct: 528 IMDFPNRLMYDGALVADPSVARRTLPVEKPPEDPCLDPSFPVVFADTSEMEASEHLPERS 587
Query: 497 DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTV 556
S N EA + L+ G+ + IGIITPY AQV K+LR ++ ++EV +V
Sbjct: 588 TSYENPTEAGHLLRWVTELVACGIAPAQIGIITPYLAQV---KLLRRLLEEFPDVEVKSV 644
Query: 557 DGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLK 616
DGFQGREKE I+IS VRSN + VGF+SD RR+NVA+TRAR + ++ D T+ +
Sbjct: 645 DGFQGREKEVILISFVRSNLAQSVGFVSDPRRLNVAMTRARSKLLMIGDRSTLEPNEPFG 704
Query: 617 RLIEYFE 623
+L E+ E
Sbjct: 705 KLFEWLE 711
>gi|423220918|ref|ZP_17207412.1| hypothetical protein HMPREF1061_04185 [Bacteroides caccae
CL03T12C61]
gi|392622396|gb|EIY16524.1| hypothetical protein HMPREF1061_04185 [Bacteroides caccae
CL03T12C61]
Length = 647
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 183/520 (35%), Positives = 282/520 (54%), Gaps = 60/520 (11%)
Query: 135 NSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN 194
+S L ++ +E +YR M +AL + N + L +L G Q P + P+
Sbjct: 148 DSSLGIQLYFDETSYRTMFEALEDTIRAKGNR-LSELRDILLGTQNPGFRELYPVRFPW- 205
Query: 195 SNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVD 254
L+ +Q+ A++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD
Sbjct: 206 --LNSTQETAVNKVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVD 263
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQV--------LRGDNSSL---ASDIRK 303
I E+LV V ++R+G+P R+ ++L + + L G S+ S +RK
Sbjct: 264 WISEKLVDRGVPVLRIGNPTRVNDKMLSFTYERRFESHPAYPELWGIRKSIRETGSRMRK 323
Query: 304 ----EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
E + + ++ + +D+ T EIQ TD+ +A V+ +TL
Sbjct: 324 GSYSEREGMRSRMSRLRDRATELEIQIN----------------TDLFDSARVIASTLVS 367
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ R L+ F + IDEAAQALE ACWIA+ K R ILAGDH QLPPT++ +EA + GL
Sbjct: 368 SNHRLLNGRRFPTLFIDEAAQALEAACWIAIRKADRVILAGDHCQLPPTIKCIEAARSGL 427
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS-STEPT 478
TL E++ V S+L +QYRMHE IM + S+ Y+ +++A P R+ +
Sbjct: 428 DHTLMEKVVHKKPSAV-SLLKMQYRMHESIMRFPSEWFYHGELEAAPEVRYRSILDFDTP 486
Query: 479 LLLIDIAGCDMEEK----------KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
+ ID + D E+ K E + + E EA + R++ + D G+I
Sbjct: 487 MNWIDTSEMDFHEEFVGESFGRINKQEANLLLQELEAYINRIGKARILDEKI---DFGLI 543
Query: 529 TPYAAQVVLLKILRSK---DDKLKNME----VSTVDGFQGREKEAIIISMVRSNSKKEVG 581
+PY AQV + LRSK L+ V+TVDGFQG+E++ I IS+VR+N ++G
Sbjct: 544 SPYKAQV---QYLRSKIKVSSFLRPFRSLITVNTVDGFQGQERDVIFISLVRANEDGQIG 600
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEY 621
FL+D RRMNVA+TRAR + ++ D T++ F KRL+ +
Sbjct: 601 FLNDLRRMNVAITRARMKLVILGDAVTLTKHPFYKRLMSF 640
>gi|153808854|ref|ZP_01961522.1| hypothetical protein BACCAC_03154 [Bacteroides caccae ATCC 43185]
gi|149128680|gb|EDM19898.1| putative DNA helicase [Bacteroides caccae ATCC 43185]
Length = 647
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 183/520 (35%), Positives = 282/520 (54%), Gaps = 60/520 (11%)
Query: 135 NSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN 194
+S L ++ +E +YR M +AL + N + L +L G Q P + P+
Sbjct: 148 DSSLGIQLYFDETSYRTMFEALEDAIRAKGNR-LSELRDILLGTQNPGFRELYPVRFPW- 205
Query: 195 SNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVD 254
L+ +Q+ A++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD
Sbjct: 206 --LNSTQETAVNKVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVD 263
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQV--------LRGDNSSL---ASDIRK 303
I E+LV V ++R+G+P R+ ++L + + L G S+ S +RK
Sbjct: 264 WISEKLVDRGVPVLRIGNPTRVNDKMLSFTYERRFESHPAYPELWGIRKSIRETGSRMRK 323
Query: 304 ----EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
E + + ++ + +D+ T EIQ TD+ +A V+ +TL
Sbjct: 324 GSYSEREGMRSRMSRLRDRATELEIQIN----------------TDLFDSARVIASTLVS 367
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
+ R L+ F + IDEAAQALE ACWIA+ K R ILAGDH QLPPT++ +EA + GL
Sbjct: 368 SNHRLLNGRRFPTLFIDEAAQALEAACWIAIRKADRVILAGDHCQLPPTIKCIEAARSGL 427
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS-STEPT 478
TL E++ V S+L +QYRMHE IM + S+ Y+ +++A P R+ +
Sbjct: 428 DHTLMEKVVHKKPSAV-SLLKMQYRMHESIMRFPSEWFYHGELEAAPEVRYRSILDFDTP 486
Query: 479 LLLIDIAGCDMEEK----------KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
+ ID + D E+ K E + + E EA + R++ + D G+I
Sbjct: 487 MNWIDTSEMDFHEEFVGESFGRINKQEANLLLQELEAYINRIGKARILDEKI---DFGLI 543
Query: 529 TPYAAQVVLLKILRSK---DDKLKNME----VSTVDGFQGREKEAIIISMVRSNSKKEVG 581
+PY AQV + LRSK L+ V+TVDGFQG+E++ I IS+VR+N ++G
Sbjct: 544 SPYKAQV---QYLRSKIKVSSFLRPFRSLITVNTVDGFQGQERDVIFISLVRANEDGQIG 600
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEY 621
FL+D RRMNVA+TRAR + ++ D T++ F KRL+ +
Sbjct: 601 FLNDLRRMNVAITRARMKLVILGDAVTLTKHPFYKRLMSF 640
>gi|45657684|ref|YP_001770.1| hypothetical protein LIC11819 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|421086300|ref|ZP_15547151.1| AAA domain protein [Leptospira santarosai str. HAI1594]
gi|421102415|ref|ZP_15563019.1| AAA domain protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45600924|gb|AAS70407.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|410367529|gb|EKP22913.1| AAA domain protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410431865|gb|EKP76225.1| AAA domain protein [Leptospira santarosai str. HAI1594]
Length = 634
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 202/652 (30%), Positives = 334/652 (51%), Gaps = 41/652 (6%)
Query: 5 KTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITS--GASRNLDTAQKKGSTILNLKCV 62
K + ++S EFV +LE+E + SI S SR + ++G T+ +
Sbjct: 2 KDRNFSDSISELEFVKT-----ELEREKKEEDSIFSKDWLSRPIPDRVRQGITLYPIVYE 56
Query: 63 DAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSI 122
+ G G +L F+ + + P KF T V N+ + ++ L I
Sbjct: 57 EQTLGREGNWILTFRFSNQEEYPI-KFQTGAPVQFGKNEDR------AKAILVSLHKEKI 109
Query: 123 TVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPT 182
++ +++PE L+ L +E +Y+ M +AL + + +L G KP
Sbjct: 110 KISIEEVPEWAEEGKCFLDLLPDETSYKEMFNALDAVRLATKGTRLYVNRELLLGYGKPD 169
Query: 183 VLK-----KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV 237
++ + +++L+ SQK+A+ ++ S++V ++HGPPGTGKTTT+ EI+ Q V
Sbjct: 170 LISTRDSDRSRILGRISTSLNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLV 229
Query: 238 KRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSL 297
KIL A +N A D +VE + + ++RLGHPAR+ + S LD ++ + L
Sbjct: 230 AEEKKILVSAPTNSACDLLVESISARGILVLRLGHPARINEIAIHSTLDYKLFHHPDGKL 289
Query: 298 ASDIRKEMKALNGKLLK------TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNAD 351
++ RK++ ++ + K K++ R+++ E++ L K R + + ++ +
Sbjct: 290 LNEYRKDVIEISKQAKKFKRNFGEKEREERKKLFTEVKELKKTIRSMEIGLIDSLVSSHP 349
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
V+++T + L+N +FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S
Sbjct: 350 VIVSTPVASARGILENRTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS 409
Query: 412 VEAEKKGLGRTLFERLA---DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSG 468
EK L TLFE+ +LYG +L QYRM + I + SK+ Y+ +K+ S
Sbjct: 410 ---EKNYLETTLFEKAVENLELYGR--VFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSE 464
Query: 469 VKRTSSTEPTLLL------IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHA 522
+R S+ T ID +G D EE +DS N EA++ + L ++
Sbjct: 465 KERKSNFPKTFPFLNAFQWIDTSGTDSEEVI-LDDSISNPFEADLQVRLCFLLKENDWPE 523
Query: 523 SDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGF 582
+I I++PY AQV L+ + +D L + VST+D FQGRE I++ VRSN + GF
Sbjct: 524 DEITILSPYRAQVRLIS-EKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGRSGF 582
Query: 583 LSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
L + RR+NV + RAR + D+ T+S D FL +LI + EE + + E+
Sbjct: 583 LKESRRINVGMARARDLLLCIGDSSTLSQDPFLSKLIRFAEEKEVFRTAWEF 634
>gi|327312657|ref|YP_004328094.1| hypothetical protein HMPREF9137_0361 [Prevotella denticola F0289]
gi|326944641|gb|AEA20526.1| conserved hypothetical protein [Prevotella denticola F0289]
Length = 639
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 183/521 (35%), Positives = 287/521 (55%), Gaps = 62/521 (11%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN-SNLDHSQKD 203
+E +Y+ M DAL + K N A L + QK + +F P L+ +Q+
Sbjct: 130 DETSYQMMFDALDRTMKAKGN-RLAYLRDLFCSRQKA----EKFSFSPIRLPWLNPAQER 184
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A+++ L +K+V ++HGPPGTGKTTT+VE I + + R S++L CA SN+AVD I E+L+
Sbjct: 185 AVNEVLWAKDVAVVHGPPGTGKTTTLVEAINETLMRESQVLVCAQSNMAVDWISEKLIDR 244
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
+ ++R+G+P R+ ++L + + + IRK ++ L N +R
Sbjct: 245 GINVLRIGNPTRVNDKMLGFTYERKFEAHPDYPQLWSIRKAIRELR--------NNRKRG 296
Query: 324 IQKELRTLSKEERKRQQLAV---TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQ 380
+ + + + + + +L + T + A V+ +TL GA SR ++ F + IDEAAQ
Sbjct: 297 SESYHQKMDRLKSRATELEIRIHTSLFGEARVIASTLVGAGSRVMEGQKFTTLFIDEAAQ 356
Query: 381 ALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLT 440
ALE ACWIA+ + SR ILAGDH QLPPTV+S+ A + GLG+TL ER+ + EV ++L
Sbjct: 357 ALEAACWIAIRRASRVILAGDHCQLPPTVKSIAALRGGLGKTLMERIVE-NKPEVVTLLK 415
Query: 441 VQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK------- 492
VQYRM+E IM +SS Y +++A P R + ++ ID + M
Sbjct: 416 VQYRMNEEIMRFSSDWFYGGQVEAAPQIKYRGILDYDNPMVWIDTSDDTMTAASGSTASE 475
Query: 493 ---------KDEEDS-----------TMNEGEAEVAMAHAK---------RLIQSGVHAS 523
+D+E S +N+GEAE+ + K R++ +
Sbjct: 476 GNQTSVPSVEDKEASFHEQFVGSSFGRINKGEAELTLKTLKDYFTKIGRQRVLDERI--- 532
Query: 524 DIGIITPYAAQVVLLKILRSKDDKLKN----MEVSTVDGFQGREKEAIIISMVRSNSKKE 579
D+GII+PY AQV L+ L K + K + V+TVDGFQG+E++ I+IS+VRSN + +
Sbjct: 533 DVGIISPYRAQVQYLRSLIKKREFFKPYRSLVSVNTVDGFQGQERDVILISLVRSNEEGQ 592
Query: 580 VGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
+GFL D RRMNVA+TRAR + ++ + T++ F K+L +
Sbjct: 593 IGFLRDLRRMNVAITRARMKLIILGNVRTMTRHPFYKKLWD 633
>gi|24214798|ref|NP_712279.1| DNA and RNA helicase [Leptospira interrogans serovar Lai str.
56601]
gi|386074163|ref|YP_005988480.1| DNA and RNA helicase [Leptospira interrogans serovar Lai str. IPAV]
gi|24195805|gb|AAN49297.1| DNA and RNA helicase [Leptospira interrogans serovar Lai str.
56601]
gi|353457952|gb|AER02497.1| DNA and RNA helicase [Leptospira interrogans serovar Lai str. IPAV]
Length = 634
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 202/650 (31%), Positives = 334/650 (51%), Gaps = 37/650 (5%)
Query: 5 KTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITS--GASRNLDTAQKKGSTILNLKCV 62
K + ++S EFV +LE+E + SI S SR + ++G T+ +
Sbjct: 2 KDRNFSDSISELEFVKT-----ELEREKKEEDSIFSKDWLSRPIPDRVRQGITLYPIVYE 56
Query: 63 DAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSI 122
+ G G +L F+ + + P KF T V L N+ + ++ L I
Sbjct: 57 EQTLGREGNWILTFRFSNQEEYPI-KFQTGAPVQLGKNEDR------AKAILVSLHKEKI 109
Query: 123 TVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPT 182
++ +++PE L+ L +E +Y+ M +AL + + L G KP
Sbjct: 110 KISIEEVPEWAEEGKCFLDLLPDETSYKEMFNALDAVRLATKGTRLYVNREFLLGYGKPD 169
Query: 183 VLK-----KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV 237
++ + +++L+ SQK+A+ ++ S++V ++HGPPGTGKTTT+ EI+ Q V
Sbjct: 170 LISTRDSDRSRILGRISTSLNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLV 229
Query: 238 KRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSL 297
KIL A +N A D +VE + + ++RLGHPAR+ + S LD ++ + L
Sbjct: 230 AEEKKILVSAPTNSACDLLVESISARGILVLRLGHPARINEIAIHSTLDYKLFHHPDGKL 289
Query: 298 ASDIRKEMKALNGKLLK------TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNAD 351
++ RK++ ++ + K K++ R+++ E++ L K R + + ++ +
Sbjct: 290 LNEYRKDVIEISKQAKKFKRNFGEKEREERKKLFTEVKELKKTIRSMEIGLIDSLVSSHP 349
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
V+++T + L+N +FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S
Sbjct: 350 VIVSTPVASARGILENRTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS 409
Query: 412 VEAEKKGLGRTLFER-LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK 470
EK L TLFE+ + +L +L QYRM + I + SK+ Y+ +K+ S +
Sbjct: 410 ---EKNYLETTLFEKAVENLESYGRVFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSEKE 466
Query: 471 RTSSTEPTLLL------IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD 524
R S+ T ID +G D EE +DS N EA++ + L ++ +
Sbjct: 467 RKSNFPKTFPFLNAFQWIDTSGTDSEEVI-LDDSISNPFEADLQVRLCFLLKENDWPEDE 525
Query: 525 IGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLS 584
I I++PY AQV L+ + +D L + VST+D FQGRE I++ VRSN + GFL
Sbjct: 526 ITILSPYRAQVRLIS-EKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGRSGFLK 584
Query: 585 DRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
+ RR+NV +TRAR + D+ T+S D FL +LI + EE + + E+
Sbjct: 585 ESRRINVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEKEVFRTAWEF 634
>gi|423251575|ref|ZP_17232588.1| hypothetical protein HMPREF1066_03598 [Bacteroides fragilis
CL03T00C08]
gi|423254898|ref|ZP_17235828.1| hypothetical protein HMPREF1067_02472 [Bacteroides fragilis
CL03T12C07]
gi|392649760|gb|EIY43433.1| hypothetical protein HMPREF1066_03598 [Bacteroides fragilis
CL03T00C08]
gi|392653464|gb|EIY47120.1| hypothetical protein HMPREF1067_02472 [Bacteroides fragilis
CL03T12C07]
Length = 634
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 175/499 (35%), Positives = 276/499 (55%), Gaps = 38/499 (7%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK-PFNSNLDHSQKD 203
+E +Y M +AL + + N A L +L +Q P+ ++ + P+ L+ +Q+
Sbjct: 144 DETSYHTMFEALEDVIRAKGN-RLAELRDILLSKQ-PSRWRETYPVRFPW---LNSTQEA 198
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A++K L +K+V ++HGPPGTGKTTT+VE I + + R +++L CA SN AVD I E+LV
Sbjct: 199 AVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWIAEKLVDR 258
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
V ++R+G+P+R+ ++L + + + IRK ++ + ++ K+ + R
Sbjct: 259 GVPVLRIGNPSRVNDKMLSFTYERRFEGHPAYTELWGIRKSIREMGNRMRKS-SYSEREA 317
Query: 324 IQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALE 383
+ L + + + D+ A V+ +TL + R L F + IDEAAQALE
Sbjct: 318 AHSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRRFTTLFIDEAAQALE 377
Query: 384 IACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQY 443
ACWIA+ K R I AGDH QLPPT++ +EA + GL +TL E++A E S+L VQY
Sbjct: 378 AACWIAIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVA-ANKQETVSLLKVQY 436
Query: 444 RMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK---------- 492
RMH+ IM +SS+ Y +++A P R + + ID + + E+
Sbjct: 437 RMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLDLPMSWIDTSEMEFHEEFVGESFGRIN 496
Query: 493 KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK--- 549
K E + + E EA + KR+++ + D G+I+PY AQV L+ KLK
Sbjct: 497 KPEANLLLQELEAYIRKIGEKRVLEERI---DFGLISPYKAQVQYLR------GKLKGCL 547
Query: 550 -------NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCL 602
+ + TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR + +
Sbjct: 548 FFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLVI 607
Query: 603 VCDTETVSSDGFLKRLIEY 621
+ D T+S F K+LI Y
Sbjct: 608 LGDAVTMSKHAFYKKLIGY 626
>gi|313219712|emb|CBY30632.1| unnamed protein product [Oikopleura dioica]
Length = 857
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 196/577 (33%), Positives = 304/577 (52%), Gaps = 86/577 (14%)
Query: 111 QGVVYRLKDSSITVAFDDIPEEG----LNSPLRLEKLANEVTYRRMKDALIQLSKGVQNG 166
+G V+ +++I V D + E G L L + +++TYRRMK A ++ K ++
Sbjct: 34 RGFVFSTSEATIDVCVD-VGENGEKIALGDRLDIMPAPDDITYRRMKAASEEMKKMIETR 92
Query: 167 PAAGLIPVLFGEQKP---TVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGT 223
++ + ++FGE +P + +A K NL+ Q +A+ +L+ +++ LHGPPGT
Sbjct: 93 -SSRTVDIIFGESQPYPQVSTESFLAPKTDVKNLNKEQLEAVRASLAIQDLMCLHGPPGT 151
Query: 224 GKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR-VRLVRLGHPARLLPQVLE 282
GK+TTV I+ + +RG K + SN AVD +VE+L R V + RLGHPAR P + +
Sbjct: 152 GKSTTVAAIVAEAAQRGIKTIVTCPSNAAVDALVEKLAKRREVVVTRLGHPARTSPHLRQ 211
Query: 283 SAL-----DAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERK 337
L D ++LRG ++ +M A +G+ R E++KELR
Sbjct: 212 YTLEAKMADVEMLRG--------LKSDMYAASGR--------ERGELRKELR-------D 248
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVSRKL-----DNTSFDLVIIDEAAQALEIACWIALLK 392
R++ T+++ N+ V+ T T + + D F L I+DEA QA+E A + L +
Sbjct: 249 REKKCSTEILANSHAVVATCTVVGMKSILDVISDPEHFGLAIVDEAGQAVEPAIYPILRR 308
Query: 393 GSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN 451
S+ ILAGD QLPPTV+ A L +TL E L Y T +L QYRM++ I +
Sbjct: 309 CSKKLILAGDPAQLPPTVKFKGASI--LTKTLLEDLMGRYPSN-TVLLKRQYRMNKMISD 365
Query: 452 WSSKQLYNSKIKAHPS--------------GVKRTSSTE-------PTLLLIDIAGCDME 490
W S +Y ++ A S GV + + + + LID G +M+
Sbjct: 366 WVSDSMYRGELIADESVQNHTLADLLQDVEGVAKQAGADFVEDILSSPMTLIDTVGSNMD 425
Query: 491 EKKDEEDST-------------MNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVL 537
E + ED + GEA +A K LI++G+ +I II+PYAAQV L
Sbjct: 426 EDQVSEDQSKVLGCQSIEHFPETIPGEALLATLTTKILIKAGIKPKNIAIISPYAAQVQL 485
Query: 538 LKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
+ L + V TVDG+QG E E +I+S+VRSN GFLSDRRR+NVAV+RAR
Sbjct: 486 IAKLVGP-----TVSVRTVDGYQGGEAEVVILSLVRSNIDGTTGFLSDRRRLNVAVSRAR 540
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
+ C ++ D+ TV+ D F++++ EYF E+A +S +++
Sbjct: 541 KSCIVIGDSGTVTRDSFIEKMFEYFGENANLISPAQF 577
>gi|455789602|gb|EMF41523.1| AAA domain protein [Leptospira interrogans serovar Lora str. TE
1992]
Length = 634
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 202/650 (31%), Positives = 334/650 (51%), Gaps = 37/650 (5%)
Query: 5 KTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITS--GASRNLDTAQKKGSTILNLKCV 62
K + ++S EFV +LE+E + SI S SR + ++G T+ +
Sbjct: 2 KDRNFSDSISELEFVKT-----ELEREKKEEDSIFSKDWLSRPIPDRVRQGITLYPIVYE 56
Query: 63 DAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSI 122
+ G G +L F+ + + P KF T V L N+ + ++ L I
Sbjct: 57 EQTLGREGNWILTFRFSNQEEYPI-KFQTGAPVQLGKNEDR------AKAILVSLHKEKI 109
Query: 123 TVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPT 182
++ +++PE L+ L +E +Y+ M +AL + + L G KP
Sbjct: 110 KISIEEVPEWAEEGKCFLDLLPDETSYKEMFNALDAVRLATKGTRLYVNREFLLGYGKPD 169
Query: 183 VLK-----KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV 237
++ + +++L+ SQK+A+ ++ S++V ++HGPPGTGKTTT+ EI+ Q V
Sbjct: 170 LISTRDSDRSRILGRISTSLNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLV 229
Query: 238 KRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSL 297
KIL A +N A D +VE + + ++RLGHPAR+ + S LD ++ + L
Sbjct: 230 AEEKKILVSAPTNSACDLLVESISARGILVLRLGHPARINEIAIHSTLDYKLFHHPDGKL 289
Query: 298 ASDIRKEMKALNGKLLK------TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNAD 351
++ RK++ ++ + K K++ R+++ E++ L K R + + ++ +
Sbjct: 290 LNEYRKDVIEISKQAKKFKRNFGEKEREERKKLFTEVKELKKTIRSMEIGLIDSLVSSHP 349
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
V+++T + L+N +FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S
Sbjct: 350 VIVSTPVASARGILENRTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS 409
Query: 412 VEAEKKGLGRTLFER-LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK 470
EK L TLFE+ + +L +L QYRM + I + SK+ Y+ +K+ S +
Sbjct: 410 ---EKNYLETTLFEKAVENLESYGRIFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSEKE 466
Query: 471 RTSSTEPTLLL------IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD 524
R S+ T ID +G D EE +DS N EA++ + L ++ +
Sbjct: 467 RKSNFPKTFPFLNAFQWIDTSGTDSEEVI-LDDSISNPFEADLQVRLCFLLKENDWPEDE 525
Query: 525 IGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLS 584
I I++PY AQV L+ + +D L + VST+D FQGRE I++ VRSN + GFL
Sbjct: 526 ITILSPYRAQVRLIS-EKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGRSGFLK 584
Query: 585 DRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
+ RR+NV +TRAR + D+ T+S D FL +LI + EE + + E+
Sbjct: 585 ESRRINVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEKEVFRTAWEF 634
>gi|421123849|ref|ZP_15584119.1| AAA domain protein [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421134672|ref|ZP_15594805.1| AAA domain protein [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410021256|gb|EKO88048.1| AAA domain protein [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410438336|gb|EKP87422.1| AAA domain protein [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
Length = 634
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 202/650 (31%), Positives = 333/650 (51%), Gaps = 37/650 (5%)
Query: 5 KTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITS--GASRNLDTAQKKGSTILNLKCV 62
K + ++S EFV +LE+E + SI S SR + ++G T+ +
Sbjct: 2 KDRNFSDSISELEFVKT-----ELEREKKEEDSIFSKDWLSRPIPDRVRQGITLYPIVYE 56
Query: 63 DAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSI 122
+ G G +L F+ + + P KF T V L N+ + ++ L I
Sbjct: 57 EQTLGREGNWILTFRFSNQEEYPI-KFQTGAPVQLGKNEDR------AKAILVSLHKEKI 109
Query: 123 TVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPT 182
++ +++PE L+ L +E +Y+ M +AL + + L G KP
Sbjct: 110 KISIEEVPEWAEEGKCFLDLLPDETSYKEMFNALDAVRLATKGTRLYVNREFLLGYGKPD 169
Query: 183 VLK-----KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV 237
++ + +++L+ SQK+A+ ++ S++V ++HGPPGTGKTTT+ EI+ Q V
Sbjct: 170 LISTRDSDRSRILGRISTSLNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLV 229
Query: 238 KRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSL 297
KIL A +N A D +VE + + ++RLGHPAR+ + S LD ++ + L
Sbjct: 230 AEEKKILVSAPTNSACDLLVESISARGILVLRLGHPARINEIAIHSTLDYKLFHHPDGKL 289
Query: 298 ASDIRKEMKALNGKLLK------TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNAD 351
++ RK++ ++ + K K++ R++ E++ L K R + + ++ +
Sbjct: 290 LNEYRKDVIEISKQAKKFKRNFGEKEREERKKFFTEVKELKKTIRSMEIGLIDSLVSSHP 349
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
V+++T + L+N +FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S
Sbjct: 350 VIVSTPVASARGILENRTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS 409
Query: 412 VEAEKKGLGRTLFER-LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK 470
EK L TLFE+ + +L +L QYRM + I + SK+ Y+ +K+ S +
Sbjct: 410 ---EKNYLETTLFEKAVENLESYGRVFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSEKE 466
Query: 471 RTSSTEPTLLL------IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD 524
R S+ T ID +G D EE +DS N EA++ + L ++ +
Sbjct: 467 RKSNFPKTFPFLNAFQWIDTSGTDSEEVI-LDDSISNPFEADLQVRLCFLLKENDWPEDE 525
Query: 525 IGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLS 584
I I++PY AQV L+ + +D L + VST+D FQGRE I++ VRSN + GFL
Sbjct: 526 ITILSPYRAQVRLIS-EKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGRSGFLK 584
Query: 585 DRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
+ RR+NV +TRAR + D+ T+S D FL +LI + EE + + E+
Sbjct: 585 ESRRINVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEKEVFRTAWEF 634
>gi|265766889|ref|ZP_06094718.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263253266|gb|EEZ24742.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 634
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 175/500 (35%), Positives = 277/500 (55%), Gaps = 40/500 (8%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK-PFNSNLDHSQKD 203
+E +YR M +AL + + N A L +L +Q P+ + + P+ L+ +Q+
Sbjct: 144 DETSYRTMFEALEDVIRAKGN-RLAELRDILLSKQ-PSCWRATYPVRFPW---LNSTQEA 198
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A++K L +K+V ++HGPPGTGKTTT+VE I + + R +++L CA SN AVD I E+LV
Sbjct: 199 AVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWIAEKLVDR 258
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
V ++R+G+P+R+ ++L + + + IRK ++ + ++ K+ + RE
Sbjct: 259 GVPVLRIGNPSRVNDKMLSFTYERRFEGHPAYTELWGIRKSIREMGNRMRKS--SYSERE 316
Query: 324 IQKELRTLSKEERKRQQLAVT-DVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQAL 382
+ +E ++ + D+ A V+ +TL + R L F + IDEAAQAL
Sbjct: 317 AARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRRFTTLFIDEAAQAL 376
Query: 383 EIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQ 442
E ACW A+ + R I AGDH QLPPT++ +EA + GL +TL E++A E S+L VQ
Sbjct: 377 EAACWTAIRRADRVIFAGDHCQLPPTIKCIEAAQNGLEQTLMEKVA-ANKQETVSLLKVQ 435
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK--------- 492
YRMH+ IM +SS+ Y +++A P R + + ID + + E+
Sbjct: 436 YRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLDLPMSWIDTSEMEFHEEFVGESFGRI 495
Query: 493 -KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK-- 549
K E + + E EA + KR+++ + D G+I+PY AQV L+ KLK
Sbjct: 496 NKPEANLLLQELEAYIRKIGEKRVLEERI---DFGLISPYKAQVQYLR------GKLKGC 546
Query: 550 --------NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
+ + TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR +
Sbjct: 547 LFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLV 606
Query: 602 LVCDTETVSSDGFLKRLIEY 621
++ D T+S F K+LI Y
Sbjct: 607 ILGDAVTMSKHAFYKKLIGY 626
>gi|325860214|ref|ZP_08173339.1| hypothetical protein HMPREF9303_0593 [Prevotella denticola CRIS
18C-A]
gi|325482301|gb|EGC85309.1| hypothetical protein HMPREF9303_0593 [Prevotella denticola CRIS
18C-A]
Length = 639
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 184/521 (35%), Positives = 285/521 (54%), Gaps = 62/521 (11%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN-SNLDHSQKD 203
+E +Y+ M DAL + K N A L + QK + +F P L+ +Q+
Sbjct: 130 DETSYQMMFDALDRTMKAKGN-RMAYLRDLFCSRQKA----EKFSFAPIRLPWLNPAQER 184
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A++ L +K+V ++HGPPGTGKTTT+VE I + + R S++L CA SN+AVD I E+L+
Sbjct: 185 AVNGVLWAKDVAVIHGPPGTGKTTTLVEAINETLMRESQVLVCAQSNMAVDWISEKLIDR 244
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
+ ++R+G+P R+ ++L + + + IRK ++ L N +R
Sbjct: 245 GINVLRIGNPTRVNDKMLGFTYERKFEAHPDYPQLWSIRKAIRELR--------NNRKRG 296
Query: 324 IQKELRTLSKEERKRQQLAV---TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQ 380
+ + + + + + +L + T + A VV +TL GA SR ++ F + IDEAAQ
Sbjct: 297 SESYHQKMDRLKSRATELEIRIHTSLFGEARVVASTLVGAGSRVMEGQKFTTLFIDEAAQ 356
Query: 381 ALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLT 440
ALE ACWIA+ + SR ILAGDH QLPPTV+S+ A + GLG+TL ER+ + EV ++L
Sbjct: 357 ALEAACWIAIRRASRVILAGDHCQLPPTVKSIAALRGGLGKTLMERIVE-NKPEVVTLLK 415
Query: 441 VQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDM---------- 489
VQYRM+E IM +SS Y +++A P R + ++ ID + M
Sbjct: 416 VQYRMNEEIMRFSSDWFYGGQVEAAPQIKYRGILDYDNPMVWIDTSDDTMTAASGSTASE 475
Query: 490 ------EEKKDEEDS-----------TMNEGEAEVAMAHAK---------RLIQSGVHAS 523
K +E S +N+GEAE+ + K R++ +
Sbjct: 476 GNQTSVPSGKGKEASFHEQFVGSSFGRINKGEAELTLKTLKDYFTKIGRQRVLDEQI--- 532
Query: 524 DIGIITPYAAQVVLLKILRSKDDKLKN----MEVSTVDGFQGREKEAIIISMVRSNSKKE 579
D+GII+PY AQV L+ L K + K + V+TVDGFQG+E++ I+IS+VRSN + +
Sbjct: 533 DVGIISPYRAQVQYLRSLIKKREFFKPYRSLVSVNTVDGFQGQERDVILISLVRSNEEGQ 592
Query: 580 VGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
+GFL D RRMNVA+TRAR + ++ + T++ F K+L +
Sbjct: 593 IGFLRDLRRMNVAITRARMKLIILGNVRTMTRHPFYKKLWD 633
>gi|295084850|emb|CBK66373.1| hypothetical protein [Bacteroides xylanisolvens XB1A]
Length = 649
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 174/492 (35%), Positives = 267/492 (54%), Gaps = 24/492 (4%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + N A L +L G QKP + P+ L+ +Q+ A
Sbjct: 162 DETSYRAMFEALEDTIRAKDNR-LAELRDILLGTQKPGFRELYPVRFPW---LNSTQETA 217
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 218 VNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWICEKLVDRG 277
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L S + + IRK ++ + G ++ + R +
Sbjct: 278 VPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGIRKSIREM-GSRMRRGSYSEREGM 336
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
+ + L + + D+ +A V+ +TL + R L+ F + IDEAAQALE
Sbjct: 337 RNRMSRLRDRATELEIQINADLFDSARVIASTLVSSNHRLLNGRRFSTLFIDEAAQALEA 396
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R ILAGDH QLPPT++ +EA GL TL E++ V S+L VQYR
Sbjct: 397 ACWIAIRKADRVILAGDHCQLPPTIKCIEASCGGLDHTLMEKVVQQKPSAV-SLLKVQYR 455
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEE----------KK 493
MHE IM + S Y+ +++A P R + + ID + D E K
Sbjct: 456 MHEAIMQFPSDWFYHGELEAAPEVRYRGILDFDTPMNWIDTSEMDFHEDFVGESFGRINK 515
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNME- 552
E + + E E + +R++ + D G+I+PY AQV L+ L+
Sbjct: 516 QEANLLLQELETYIERIGKERILDERI---DFGLISPYKAQVQYLRGKIKGSSFLRPFRS 572
Query: 553 ---VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
V+TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR + ++ D T+
Sbjct: 573 LITVNTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLVILGDASTL 632
Query: 610 SSDGFLKRLIEY 621
+ F KRL+ +
Sbjct: 633 TKHPFYKRLMLF 644
>gi|417761126|ref|ZP_12409140.1| AAA domain protein [Leptospira interrogans str. 2002000624]
gi|417775436|ref|ZP_12423289.1| AAA domain protein [Leptospira interrogans str. 2002000621]
gi|418672662|ref|ZP_13233998.1| AAA domain protein [Leptospira interrogans str. 2002000623]
gi|409943120|gb|EKN88723.1| AAA domain protein [Leptospira interrogans str. 2002000624]
gi|410574761|gb|EKQ37790.1| AAA domain protein [Leptospira interrogans str. 2002000621]
gi|410580350|gb|EKQ48175.1| AAA domain protein [Leptospira interrogans str. 2002000623]
Length = 634
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 201/650 (30%), Positives = 334/650 (51%), Gaps = 37/650 (5%)
Query: 5 KTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITS--GASRNLDTAQKKGSTILNLKCV 62
K + ++S EFV +LE+E + SI S SR + ++G T+ +
Sbjct: 2 KDRNFSDSISELEFVKT-----ELEREKKEEDSIFSKDWLSRPIPDRVRQGITLYPIVYE 56
Query: 63 DAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSI 122
+ G G +L F+ + + P KF T V N+ + ++ L I
Sbjct: 57 EQTLGREGNWILTFRFSNQEEYPI-KFQTGAPVQFGKNEDR------AKAILVSLHKEKI 109
Query: 123 TVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPT 182
++ +++PE L+ L +E +Y+ M +AL + + +L G KP
Sbjct: 110 KISIEEVPEWAEEGKCFLDLLPDETSYKEMFNALDAVRLATKGTRLYVNRELLLGYGKPD 169
Query: 183 VLK-----KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV 237
++ + +++L+ SQK+A+ ++ S++V ++HGPPGTGKTTT+ EI+ Q V
Sbjct: 170 LISTRDSDRSRILGRISTSLNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLV 229
Query: 238 KRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSL 297
KIL A +N A D +VE + + ++RLGHPAR+ + S LD ++ + L
Sbjct: 230 AEEKKILVSAPTNSACDLLVESISARGILVLRLGHPARINEIAIHSTLDYKLFHHPDGKL 289
Query: 298 ASDIRKEMKALNGKLLK------TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNAD 351
++ RK++ ++ + K K++ R+++ E++ L K R + + ++ +
Sbjct: 290 LNEYRKDVIEISKQAKKFKRNFGEKEREERKKLFTEVKELKKTIRSMEIGLIDSLVSSHP 349
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
V+++T + L+N +FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S
Sbjct: 350 VIVSTPVASARGILENRTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS 409
Query: 412 VEAEKKGLGRTLFER-LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK 470
EK L TLFE+ + +L +L QYRM + I + SK+ Y+ +K+ S +
Sbjct: 410 ---EKNYLETTLFEKAVENLESYGRVFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSEKE 466
Query: 471 RTSSTEPTLLL------IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD 524
R S+ T ID +G D EE +DS N EA++ + L ++ +
Sbjct: 467 RKSNFPKTFPFLNAFQWIDTSGTDSEEVI-LDDSISNPFEADLQVRLCFLLKENDWPEDE 525
Query: 525 IGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLS 584
I I++PY AQV L+ + +D L + VST+D FQGRE I++ VRSN + GFL
Sbjct: 526 ITILSPYRAQVRLIS-EKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGRSGFLK 584
Query: 585 DRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
+ RR+NV +TRAR + D+ T+S D FL +LI + EE + + E+
Sbjct: 585 ESRRINVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEKEVFRTAWEF 634
>gi|336416735|ref|ZP_08597067.1| hypothetical protein HMPREF1017_04175 [Bacteroides ovatus
3_8_47FAA]
gi|335937173|gb|EGM99077.1| hypothetical protein HMPREF1017_04175 [Bacteroides ovatus
3_8_47FAA]
Length = 645
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 174/492 (35%), Positives = 267/492 (54%), Gaps = 24/492 (4%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + N A L +L G QKP + P+ L+ +Q+ A
Sbjct: 158 DETSYRAMFEALEDTIRAKDNR-LAELRDILLGTQKPGFRELYPVRFPW---LNSTQETA 213
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 214 VNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWICEKLVDRG 273
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L S + + IRK ++ + G ++ + R +
Sbjct: 274 VPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGIRKSIREM-GSRMRRGSYSEREGM 332
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
+ + L + + D+ +A V+ +TL + R L+ F + IDEAAQALE
Sbjct: 333 RNRMSRLRDRATELEIQINADLFDSARVIASTLVSSNHRLLNGRRFSTLFIDEAAQALEA 392
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R ILAGDH QLPPT++ +EA GL TL E++ V S+L VQYR
Sbjct: 393 ACWIAIRKADRVILAGDHCQLPPTIKCIEASCGGLDHTLMEKVVQQKPSAV-SLLKVQYR 451
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEE----------KK 493
MHE IM + S Y+ +++A P R + + ID + D E K
Sbjct: 452 MHEAIMQFPSDWFYHGELEAAPEVRYRGILDFDTPMNWIDTSEMDFHEDFVGESFGRINK 511
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNME- 552
E + + E E + +R++ + D G+I+PY AQV L+ L+
Sbjct: 512 QEANLLLQELETYIERIGKERILDERI---DFGLISPYKAQVQYLRGKIKGSSFLRPFRS 568
Query: 553 ---VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
V+TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR + ++ D T+
Sbjct: 569 LITVNTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLVILGDASTL 628
Query: 610 SSDGFLKRLIEY 621
+ F KRL+ +
Sbjct: 629 TKHPFYKRLMLF 640
>gi|417782925|ref|ZP_12430648.1| AAA domain protein [Leptospira interrogans str. C10069]
gi|421120479|ref|ZP_15580790.1| AAA domain protein [Leptospira interrogans str. Brem 329]
gi|409953626|gb|EKO08122.1| AAA domain protein [Leptospira interrogans str. C10069]
gi|410346593|gb|EKO97563.1| AAA domain protein [Leptospira interrogans str. Brem 329]
gi|456821420|gb|EMF69926.1| AAA domain protein [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 634
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 202/650 (31%), Positives = 335/650 (51%), Gaps = 37/650 (5%)
Query: 5 KTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITS--GASRNLDTAQKKGSTILNLKCV 62
K + ++S EFV +LE+E + SI S SR + ++G T+ +
Sbjct: 2 KDRNFSDSISELEFVKT-----ELEREKKEEDSIFSKDWLSRPIPDRVRQGITLYPIVYE 56
Query: 63 DAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSI 122
+ G G +L F+ + + P KF T V L N+ + ++ L I
Sbjct: 57 EQTLGREGNWILTFRFSNQEEYPI-KFQTGAPVQLGKNEDR------AKAILVSLHKEKI 109
Query: 123 TVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPT 182
++ +++PE L+ L +E +Y+ M +AL + + +L G KP
Sbjct: 110 KISIEEVPEWAEEGKCFLDLLPDETSYKEMFNALDAVRLATKGTRLYVNRELLLGYGKPD 169
Query: 183 VLKKDIA-----FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV 237
++ + +++L+ SQK+A+ ++ S++V ++HGPPGTGKTTT+ EI+ Q V
Sbjct: 170 LISTRDSDHSRILGRISTSLNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLV 229
Query: 238 KRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSL 297
KIL A +N A D +VE + + ++RLGHPAR+ + S LD ++ + L
Sbjct: 230 AEEKKILVSAPTNSACDLLVESISARGILVLRLGHPARINEIAIHSTLDYKLFHHPDGKL 289
Query: 298 ASDIRKEMKALNGKLLK------TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNAD 351
++ RK++ ++ + K K++ R+++ E++ L K R + + ++ +
Sbjct: 290 LNEYRKDVIEISKQAKKFKRNFGEKEREERKKLFTEVKELKKTIRSMEIGLIDSLVSSHP 349
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
V+++T + L+N +FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S
Sbjct: 350 VIVSTPVASARGILENRTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS 409
Query: 412 VEAEKKGLGRTLFER-LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK 470
EK L TLFE+ + +L +L QYRM + I + SK+ Y+ +K+ S +
Sbjct: 410 ---EKNYLETTLFEKAVENLESYGRVFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSEKE 466
Query: 471 RTSSTEPTLLL------IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD 524
R S+ T ID +G D EE +DS N EA++ + L ++ +
Sbjct: 467 RKSNFPKTFPFLNAFQWIDTSGTDSEEVI-LDDSISNPFEADLQVRLCFLLKENDWPEDE 525
Query: 525 IGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLS 584
I I++PY AQV L+ + +D L + VST+D FQGRE I++ VRSN + GFL
Sbjct: 526 ITILSPYRAQVRLIS-EKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGRSGFLK 584
Query: 585 DRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
+ RR+NV +TRAR + D+ T+S D FL +LI + EE + + E+
Sbjct: 585 ESRRINVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEKEVFRTAWEF 634
>gi|417764049|ref|ZP_12412022.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417768495|ref|ZP_12416423.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
serovar Pomona str. Pomona]
gi|418683983|ref|ZP_13245176.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418706140|ref|ZP_13266990.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418715893|ref|ZP_13275980.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
str. UI 08452]
gi|400324361|gb|EJO76657.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400353881|gb|EJP06034.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|409949468|gb|EKN99444.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
serovar Pomona str. Pomona]
gi|410764209|gb|EKR34926.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410788121|gb|EKR81847.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
str. UI 08452]
gi|455669128|gb|EMF34296.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
serovar Pomona str. Fox 32256]
Length = 634
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 193/612 (31%), Positives = 320/612 (52%), Gaps = 34/612 (5%)
Query: 43 SRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKA 102
SR + ++G T+ + + G G +L F+ + + P KF T V L N+
Sbjct: 37 SRPIPDRVRQGITLYPIVYEEQTLGREGNWILTFRFSNQEEYPI-KFQTGAPVQLGKNED 95
Query: 103 DLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKG 162
+ ++ L I ++ +++PE L+ L +E +Y+ M +AL +
Sbjct: 96 R------AKAILVSLHKEKIKISIEEVPEWAEEGKCFLDLLPDETSYKEMFNALDAVRLA 149
Query: 163 VQNGPAAGLIPVLFGEQKPTVLK-----KDIAFKPFNSNLDHSQKDAISKALSSKNVFML 217
+ +L G KP ++ + +++L+ SQK+A+ ++ S++V ++
Sbjct: 150 TKGTRLYVNRELLLGYGKPDLISTRDSDRSRILGRISTSLNESQKNAVIHSVLSEDVMII 209
Query: 218 HGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLL 277
HGPPGTGKTTT+ EI+ Q V KIL A +N A D +VE + + ++RLGHPAR+
Sbjct: 210 HGPPGTGKTTTLTEIVSQLVAEEKKILVSAPTNSACDLLVESISTRGILVLRLGHPARVN 269
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK------TKDKNTRREIQKELRTL 331
+ S LD ++ + L ++ RK++ ++ + K K++ R+++ E++ L
Sbjct: 270 EIAIHSTLDYKLFHHPDGKLLNEYRKDVIEISKQAKKFKRNFGEKEREERKKLFTEVKEL 329
Query: 332 SKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL 391
K R + + ++ + V+++T + L+N +FD ++DE++QALE A WI++L
Sbjct: 330 KKTIRSMEIGLIDSLVSSHPVIVSTPVASARGILENRTFDFCVLDESSQALEPAFWISIL 389
Query: 392 KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA---DLYGDEVTSMLTVQYRMHEH 448
K R ILAGDH QLPPT+ S EK L TLFE+ A + YG +L QYRM +
Sbjct: 390 KSDRVILAGDHKQLPPTLFS---EKNYLETTLFEKAAENLESYGR--VFLLDTQYRMKDE 444
Query: 449 IMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLL------IDIAGCDMEEKKDEEDSTMNE 502
I + SK+ Y+ +K+ S +R S+ T ID +G D EE +DS N
Sbjct: 445 ISAFPSKEFYSGLLKSGRSEKERKSNFPKTFPFSNAFQWIDTSGTDSEEVI-LDDSISNP 503
Query: 503 GEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGR 562
EA++ + L ++ +I I++PY AQV L+ + +D L + VST+D FQGR
Sbjct: 504 FEADLQVRLCFLLKENDWPEDEITILSPYRAQVRLIS-EKLRDVGLTKINVSTIDSFQGR 562
Query: 563 EKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
E I++ VRSN + GFL + RR+NV +TRAR + D+ T+S D FL +LI +
Sbjct: 563 ENRCILLGFVRSNLEGRSGFLKESRRINVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFA 622
Query: 623 EEHAEYLSGSEY 634
EE + + E+
Sbjct: 623 EEKEVFRTAWEF 634
>gi|418692553|ref|ZP_13253631.1| AAA domain protein [Leptospira interrogans str. FPW2026]
gi|400357786|gb|EJP13906.1| AAA domain protein [Leptospira interrogans str. FPW2026]
Length = 634
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 201/650 (30%), Positives = 333/650 (51%), Gaps = 37/650 (5%)
Query: 5 KTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITS--GASRNLDTAQKKGSTILNLKCV 62
K + ++S EFV +LE+E + SI S SR + ++G T+ +
Sbjct: 2 KDRNFSDSISELEFVKT-----ELEREKKEEDSIFSKDWLSRPIPDRVRQGITLYPIVYE 56
Query: 63 DAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSI 122
+ G G +L F+ + + P KF T V N+ + ++ L I
Sbjct: 57 EQTLGREGNWILTFRFSNQEEYPI-KFQTGAPVQFGKNEDR------AKAILVSLHKEKI 109
Query: 123 TVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPT 182
++ +++PE L+ L +E +Y+ M +AL + + +L G KP
Sbjct: 110 KISIEEVPEWAEEGKCFLDLLPDETSYKEMFNALDAVRLATKGTRLYVNRELLLGYGKPD 169
Query: 183 VLK-----KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV 237
++ + +++L+ SQK+A+ ++ S++V ++HGPPGTGKTTT+ EI+ Q V
Sbjct: 170 LISTRDSDRSRILGRISTSLNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLV 229
Query: 238 KRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSL 297
KIL A +N A D +VE + + ++RLGHPAR+ + S LD ++ + L
Sbjct: 230 AEEKKILVSAPTNSACDLLVESISARGILVLRLGHPARINEIAIHSTLDYKLFHHPDGKL 289
Query: 298 ASDIRKEMKALNGKLLK------TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNAD 351
++ RK++ ++ + K K++ R++ E++ L K R + + ++ +
Sbjct: 290 LNEYRKDVIEISKQAKKFKRNFGEKEREERKKFFTEVKELKKTIRSMEIGLIDSLVSSHP 349
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
V+++T + L+N +FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S
Sbjct: 350 VIVSTPVASARGILENRTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS 409
Query: 412 VEAEKKGLGRTLFER-LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK 470
EK L TLFE+ + +L +L QYRM + I + SK+ Y+ +K+ S +
Sbjct: 410 ---EKNYLETTLFEKAVENLESYGRVFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSEKE 466
Query: 471 RTSSTEPTLLL------IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD 524
R S+ T ID +G D EE +DS N EA++ + L ++ +
Sbjct: 467 RKSNFPKTFPFLNAFQWIDTSGTDSEEVI-LDDSISNPFEADLQVRLCFLLKENDWPEDE 525
Query: 525 IGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLS 584
I I++PY AQV L+ + +D L + VST+D FQGRE I++ VRSN + GFL
Sbjct: 526 ITILSPYRAQVRLIS-EKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGRSGFLK 584
Query: 585 DRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
+ RR+NV +TRAR + D+ T+S D FL +LI + EE + + E+
Sbjct: 585 ESRRINVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEKEVFRTAWEF 634
>gi|418700935|ref|ZP_13261873.1| AAA domain protein [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410760030|gb|EKR26230.1| AAA domain protein [Leptospira interrogans serovar Bataviae str.
L1111]
Length = 634
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 193/612 (31%), Positives = 319/612 (52%), Gaps = 34/612 (5%)
Query: 43 SRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKA 102
SR + ++G T+ + + G G +L F+ + + P KF T V L N+
Sbjct: 37 SRPIPDRVRQGITLYPIVYEEQTLGREGNWILTFRFSNQEEYPI-KFQTGAPVQLGKNED 95
Query: 103 DLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKG 162
+ ++ L I ++ +++PE L+ L +E +Y+ M +AL +
Sbjct: 96 R------AKAILVSLHKEKIKISIEEVPEWAEEGKCFLDLLPDETSYKEMFNALDAVRLA 149
Query: 163 VQNGPAAGLIPVLFGEQKPTVLK-----KDIAFKPFNSNLDHSQKDAISKALSSKNVFML 217
+ +L G KP ++ + +++L+ SQK+A+ ++ S++V ++
Sbjct: 150 TKGTRLYVNRELLLGYGKPDLISTRDSDRSRILGRISTSLNESQKNAVIHSVLSEDVMII 209
Query: 218 HGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLL 277
HGPPGTGKTTT+ EI+ Q V KIL A +N A D +VE + + ++RLGHPAR+
Sbjct: 210 HGPPGTGKTTTLTEIVSQLVAEEKKILVSAPTNSACDLLVESISARGILVLRLGHPARIN 269
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK------TKDKNTRREIQKELRTL 331
+ S LD ++ + L ++ RK++ ++ + K K++ R+++ E++ L
Sbjct: 270 EIAIHSTLDYKLFHHPDGKLLNEYRKDVIEISKQAKKFKRNFGEKEREERKKLFTEVKEL 329
Query: 332 SKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL 391
K R + + ++ + V+++T + L+N +FD ++DE++QALE A WI +L
Sbjct: 330 KKTIRSMEIGLIDSLVSSHPVIVSTPVASARGILENRTFDFCVLDESSQALEPAFWIPIL 389
Query: 392 KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA---DLYGDEVTSMLTVQYRMHEH 448
K R ILAGDH QLPPT+ S EK L TLFE+ A + YG +L QYRM +
Sbjct: 390 KSDRVILAGDHKQLPPTLFS---EKNYLETTLFEKAAENLESYGR--VFLLDTQYRMKDE 444
Query: 449 IMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLL------IDIAGCDMEEKKDEEDSTMNE 502
I + SK+ Y+ +K+ S +R S+ T ID +G D EE +DS N
Sbjct: 445 ISAFPSKEFYSGLLKSGRSEKERKSNFPKTFPFLNAFQWIDTSGTDSEEVI-LDDSISNP 503
Query: 503 GEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGR 562
EA++ + L ++ +I I++PY AQV L+ + +D L + VST+D FQGR
Sbjct: 504 FEADLQVRLCFLLKENDWPEDEITILSPYRAQVRLIS-EKLRDVGLTKINVSTIDSFQGR 562
Query: 563 EKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
E I++ VRSN + GFL + RR+NV +TRAR + D+ T+S D FL +LI +
Sbjct: 563 ENRCILLGFVRSNLEGRSGFLKESRRINVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFA 622
Query: 623 EEHAEYLSGSEY 634
EE + + E+
Sbjct: 623 EEKEVFRTAWEF 634
>gi|374635637|ref|ZP_09707232.1| DNA helicase [Methanotorris formicicus Mc-S-70]
gi|373561703|gb|EHP87932.1| DNA helicase [Methanotorris formicicus Mc-S-70]
Length = 637
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 207/629 (32%), Positives = 333/629 (52%), Gaps = 91/629 (14%)
Query: 47 DTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVL---KPNKAD 103
D + G ILNLK + L G ++ + K + DVV++ P +D
Sbjct: 35 DKREDVGRAILNLKGRKLREEL-GSVIVRYGRKKP--FKRLEISVGDVVLVSKGNPLHSD 91
Query: 104 LGSPALGQGVVYRLKDSSITVAFDD-IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKG 162
L G V + + I +AFD+ IP+ +R++ N++T++RMK AL + +
Sbjct: 92 LF------GNVVEIGKNFIDIAFDEEIPKWAYKD-VRIDLYVNDITFKRMKKALNKF-RE 143
Query: 163 VQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPG 222
+ N LI ++ G + + + K++ F+ +L+ SQK+A+ AL + +++++HGPPG
Sbjct: 144 IDNR----LIGIILGIDE-SRMGKEVKIGFFDKSLNESQKNAVINALRAMDLYLIHGPPG 198
Query: 223 TGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR-VRLVRLGHPARLLPQVL 281
TGKT T+ E+I+QE R +K+LA A SNIA DNI+ L ++ + +VR+GHP R+ ++
Sbjct: 199 TGKTRTITEVIVQECMRKNKVLATADSNIAADNILSNLSKYKNINVVRIGHPTRISKNLI 258
Query: 282 ESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTR-------------------- 321
E +L V + + I+++M L + K K R
Sbjct: 259 EHSLFYMVEKHEKYKAIKKIKEDMIGLMDERDKHKKPTPRWRRGMSDDEIVIFSKLNKDI 318
Query: 322 --------REIQKELRTLSKEERKRQQLA------VTDVIKNADVVLTTLTGAVSRKLDN 367
+ + K ++T K ++ R+++ + + I+ ADVV+ T + A L+
Sbjct: 319 RGIPRDILKSMAKWIKTNEKIKKLREKMKKIEDEIIKETIRKADVVVATNSMAGCDFLEE 378
Query: 368 TSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERL 427
FD+ +IDE +Q++E + I ++K + I+AGDH QLPPTV S + E L +TLFERL
Sbjct: 379 FEFDVCVIDEGSQSMEPSALIPIVKSKKLIMAGDHKQLPPTVLSEDEE---LKKTLFERL 435
Query: 428 ADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------------- 474
Y + +S+L +QYRM+E IM + +K Y++K+KAH S T
Sbjct: 436 IKTYPN-FSSILEIQYRMNEKIMKFPNKAFYDNKLKAHKSVESHTIFDLIDVEVDEEDKF 494
Query: 475 --TEPTLLLIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPY 531
E ++ ID+ G +EK+D++ S NE EA+V AK + + + +ITPY
Sbjct: 495 IINEEPIVFIDVKG---KEKRDKDSTSYYNEEEAKVV---AKLVGIFKKYNIPVSVITPY 548
Query: 532 AAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNV 591
AQV L+ L + EV+TVDGFQG+E E IIIS VR+ K+ GFL D RR+NV
Sbjct: 549 DAQVKLI-------SNLCDGEVNTVDGFQGKEDEVIIISFVRT---KKFGFLEDLRRLNV 598
Query: 592 AVTRARRQCCLVCDTETVSSDGFLKRLIE 620
A+TRA+R+ +V E +S D + LI+
Sbjct: 599 AITRAKRKLIIVGCKELLSQDETYRELIK 627
>gi|418726118|ref|ZP_13284729.1| AAA domain protein [Leptospira interrogans str. UI 12621]
gi|418733454|ref|ZP_13290578.1| AAA domain protein [Leptospira interrogans str. UI 12758]
gi|409960028|gb|EKO23782.1| AAA domain protein [Leptospira interrogans str. UI 12621]
gi|410773063|gb|EKR53094.1| AAA domain protein [Leptospira interrogans str. UI 12758]
Length = 634
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 201/650 (30%), Positives = 333/650 (51%), Gaps = 37/650 (5%)
Query: 5 KTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITS--GASRNLDTAQKKGSTILNLKCV 62
K + ++S EFV +LE+E + SI S SR + ++G T+ +
Sbjct: 2 KDRNFSDSISELEFVKT-----ELEREKKEEDSIFSKDWLSRPIPDRVRQGITLYPIVYE 56
Query: 63 DAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSI 122
+ G G +L F+ + + P KF T V N+ + ++ L I
Sbjct: 57 EQTLGREGNWILTFRFSNQEEYPI-KFQTGAPVQFGKNEDR------AKAILVSLHKEKI 109
Query: 123 TVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPT 182
++ +++PE L+ L +E +Y+ M +AL + + L G KP
Sbjct: 110 KISIEEVPEWAEEGKCFLDLLPDETSYKEMFNALDAVRLATKGTRLYVNREFLLGYGKPD 169
Query: 183 VLK-----KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV 237
++ + +++L+ SQK+A+ ++ S++V ++HGPPGTGKTTT+ EI+ Q V
Sbjct: 170 LISTRDSDRSRILGRISTSLNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLV 229
Query: 238 KRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSL 297
KIL A +N A D +VE + + ++RLGHPAR+ + S LD ++ + L
Sbjct: 230 AEEKKILVSAPTNSACDLLVESISARGILVLRLGHPARINEIAIHSTLDYKLFHHPDGKL 289
Query: 298 ASDIRKEMKALNGKLLK------TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNAD 351
++ RK++ ++ + K K++ R+++ E++ L K R + + ++ +
Sbjct: 290 LNEYRKDVIEISKQAKKFKRNFGEKEREERKKLFTEVKELKKTIRSMEIGLIDSLVSSHP 349
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
V+++T + L+N +FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S
Sbjct: 350 VIVSTPVASARGILENRTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS 409
Query: 412 VEAEKKGLGRTLFER-LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK 470
EK L TLFE+ + +L +L QYRM + I + SK+ Y+ +K+ S +
Sbjct: 410 ---EKNYLETTLFEKAVENLESYGRIFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSEKE 466
Query: 471 RTSSTEPTLLL------IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD 524
R S+ T ID +G D EE +DS N EA++ + L ++ +
Sbjct: 467 RKSNFPKTFPFLNAFQWIDTSGTDSEEVI-LDDSISNPFEADLQVRLCFLLKENDWPEDE 525
Query: 525 IGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLS 584
I I++PY AQV L+ + +D L + VST+D FQGRE I++ VRSN + GFL
Sbjct: 526 ITILSPYRAQVRLIS-EKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGRSGFLK 584
Query: 585 DRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
+ RR+NV +TRAR + D+ T+S D FL +LI + EE + + E+
Sbjct: 585 ESRRINVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEKEVFRTAWEF 634
>gi|398337026|ref|ZP_10521731.1| DNA and RNA helicase subunit [Leptospira kmetyi serovar Malaysia
str. Bejo-Iso9]
Length = 634
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 205/653 (31%), Positives = 331/653 (50%), Gaps = 45/653 (6%)
Query: 7 KEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQT 66
KE++ + S+ E V + L + EK+ E S SR L K G T+ L +
Sbjct: 2 KEQKFSDSISELEFVRSEL-EREKKEEDSLFSKDWLSRPLQDRIKLGITLHPLVYEEQSL 60
Query: 67 GLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPA-LGQG------VVYRLKD 119
G G +L F+ + P KF + G+P +G+G V+ L
Sbjct: 61 GREGSWILTFRFPDQEEYPV-KFQS-------------GAPVQIGKGEDRIRAVLVSLHK 106
Query: 120 SSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQ 179
I ++ +++PE L+ L +E +Y+ M AL +S + +L G
Sbjct: 107 ERIRISVEEVPEWTEEGKCFLDLLPDETSYKEMFHALDAVSSATKGTRLYVNRELLLGYG 166
Query: 180 KPTVLK-----KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIIL 234
KP + + N++L+ SQK+A+ + S++V ++HGPPGTGKTTT+ EI+
Sbjct: 167 KPDPIHIRETDRSRILGRINASLNDSQKNAVLHCVLSEDVSIIHGPPGTGKTTTLTEIVS 226
Query: 235 QEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDN 294
Q V KIL A ++ A D +VE + + ++RLGHPAR+ L S LD ++ +
Sbjct: 227 QIVAEDRKILVSAPTHSACDLLVESISEKGIPVLRLGHPARISESALHSTLDYKLFHHPD 286
Query: 295 SSLASDIRKEMKALNGKLLK------TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIK 348
L S+ R+++ ++ + K K++ R+ + E++ L K R ++ + +I
Sbjct: 287 GKLLSEYRRDVVEISKQAKKFKRNFGEKEREERKNLFAEVKELKKTIRSMEKGLIDSLIS 346
Query: 349 NADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPT 408
+ V+++T + L+ +FD ++DE++QALE A WI +LK R ILAGDH QLPPT
Sbjct: 347 SHPVIVSTPVASARGILEGRTFDFCVLDESSQALEPASWIPILKSDRVILAGDHKQLPPT 406
Query: 409 VQSVEAEKKGLGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK-AHP 466
+ S EK L TLFE+ A+ L +L QYRM + I ++ SK+ Y+ +K P
Sbjct: 407 LFS---EKNSLELTLFEKAAERLAVSGRVFLLDTQYRMKDEIASFPSKEFYSDLLKPGRP 463
Query: 467 SGVKRTSSTE-----PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVH 521
+ + E + ID AG D EE +DS N EA++ + L ++
Sbjct: 464 QNERASDFPENFPFSKSFQWIDTAGTDSEEIS-VDDSLTNPYEADLQIQLCSLLRENDWP 522
Query: 522 ASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVG 581
+I I++PY AQV L+ + K+ + +ST+D FQGRE I++ VRSNS+ G
Sbjct: 523 QEEITILSPYRAQVRLIS-EKLKEAGFSKVGISTIDSFQGRENRCILLGFVRSNSEGRSG 581
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
FL + RR+NV +TRAR + D+ T+S D FL +LI + E+ + + E+
Sbjct: 582 FLKESRRINVGITRARDLLLCIGDSSTLSEDPFLSKLIRFAEDEDVFRTAWEF 634
>gi|160885310|ref|ZP_02066313.1| hypothetical protein BACOVA_03309 [Bacteroides ovatus ATCC 8483]
gi|156109660|gb|EDO11405.1| putative DNA helicase [Bacteroides ovatus ATCC 8483]
Length = 649
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 175/489 (35%), Positives = 266/489 (54%), Gaps = 18/489 (3%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + N A L +L G QKP + P+ L+ +Q+ A
Sbjct: 162 DETSYRAMFEALEDTIRAKDNR-LAELRDILLGTQKPGFRELYPVRFPW---LNSTQETA 217
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AVD I E+LV
Sbjct: 218 VNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWICEKLVDRG 277
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L S + + IRK ++ + G ++ + R +
Sbjct: 278 VPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGIRKSIREM-GSRMRRGSYSEREGM 336
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
+ + L + + D+ +A V+ +TL + R L+ F + IDEAAQALE
Sbjct: 337 RNRMSRLRDRATELEIQINADLFDSARVIASTLVSSNHRLLNGRRFSTLFIDEAAQALEA 396
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R ILAGDH QLPPT++ +EA GL TL E++ V S+L VQYR
Sbjct: 397 ACWIAIRKADRVILAGDHCQLPPTIKCIEASCGGLDHTLMEKVVQQKPSAV-SLLKVQYR 455
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEKK-DEEDSTMNE 502
MHE IM + S Y+ +++A P R + + ID + D E E +N+
Sbjct: 456 MHEAIMQFPSDWFYHGELEAAPEVRYRGILDFDTPMNWIDTSEMDFHEDFVGESFGRINK 515
Query: 503 GEAEVAMAHAKRLIQSGVHAS------DIGIITPYAAQVVLLKILRSKDDKLKNME---- 552
EA + + K I+ D G+I+PY AQV L+ L+
Sbjct: 516 QEANLLLQELKTYIERIGKERILDERIDFGLISPYKAQVQYLRGKIKGSSFLRPFRSLIT 575
Query: 553 VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSD 612
V+TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR + ++ D T++
Sbjct: 576 VNTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKLVILGDASTLTKH 635
Query: 613 GFLKRLIEY 621
F KRL+ +
Sbjct: 636 PFYKRLMLF 644
>gi|300773891|ref|ZP_07083760.1| DNA helicase [Sphingobacterium spiritivorum ATCC 33861]
gi|300760062|gb|EFK56889.1| DNA helicase [Sphingobacterium spiritivorum ATCC 33861]
Length = 634
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 180/537 (33%), Positives = 297/537 (55%), Gaps = 31/537 (5%)
Query: 122 ITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKP 181
I++ D++P+ + L ++ L +E +Y+ M AL + + LI +L +
Sbjct: 106 ISLRVDELPDWVRSGKLGVDLLFDENSYQEMFKALKRADAARDDKKMGPLINMLIDQH-- 163
Query: 182 TVLKKD--IAFKPFNS--NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII---L 234
V D ++ NS L+ Q A+++ ++S ++ ++HGPPGTGKTTT+V+ I L
Sbjct: 164 -VHDSDHMVSDHQINSITGLNEYQLKAVNQIIASPHLTIVHGPPGTGKTTTLVQGIKALL 222
Query: 235 QEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDN 294
Q K +IL A SN AVD + E+L V++VR+G+P ++ Q+ E LD ++
Sbjct: 223 Q--KYPDQILVTAPSNTAVDLLTEKLHETGVKVVRIGNPVKVSEQLHELTLDGKLESHPM 280
Query: 295 SSLASDIRKEMKALNGKLLKTK------DKNTRREIQKELRTLSKEERKRQQLAVTDVIK 348
IRK+ K K +++ ++ + +E + L KE + Q D++
Sbjct: 281 QKELKTIRKKADVFRDMAKKYKRNFGKAERDQKKALFQEAKNLMKEAEQIAQYIQKDILD 340
Query: 349 NADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPT 408
A V+ TL G+ + + ++ V IDEA QALE ACWI +LK + ILAGDHLQLPPT
Sbjct: 341 QAQVITATLVGSNHSAIQDRTYAAVFIDEAGQALEPACWIPILKSDKLILAGDHLQLPPT 400
Query: 409 VQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS- 467
++S ++ + TL E+L Y V +L QYRMH+ IM + S LYN+ + A PS
Sbjct: 401 IKSKDSSVRAFHETLMEKLVHAYPSCV-CLLRQQYRMHQDIMQYPSAALYNNTLFAEPSI 459
Query: 468 GVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLI------QSGVH 521
+ + + L ID AG +E + E+ + N EA + H + + ++
Sbjct: 460 AQQELTPGDNAFLFIDTAGAGFDEVQ-EDTAISNIEEANFLIQHLTQYLAAFKKDENMSP 518
Query: 522 ASDIGIITPYAAQVVLLKILRSKDDKLK---NMEVSTVDGFQGREKEAIIISMVRSNSKK 578
+IG+I+PY QV+LLK L ++D++K ++++ T+DGFQG+E++ I IS+ RSN++
Sbjct: 519 FPNIGLISPYRQQVLLLKEL-IRNDEMKISVSIQIQTIDGFQGQERDIIYISLTRSNAEG 577
Query: 579 EVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYL 635
++GFL++ RRMNVA+TRAR + ++ D+ T+ F +I+Y E Y S E++
Sbjct: 578 QIGFLNEIRRMNVAMTRARYKLIIIGDSSTIGQHPFYAGMIQYAESIDAYKSVWEWM 634
>gi|302825099|ref|XP_002994184.1| hypothetical protein SELMODRAFT_138328 [Selaginella moellendorffii]
gi|300137957|gb|EFJ04747.1| hypothetical protein SELMODRAFT_138328 [Selaginella moellendorffii]
Length = 226
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/225 (58%), Positives = 162/225 (72%), Gaps = 28/225 (12%)
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSK------------------IKAHP----------SGV 469
MLTVQYRMHEHIM+WSS +LY K I+AH GV
Sbjct: 1 MLTVQYRMHEHIMDWSSHELYGGKVGTDWTFLKLTTRHAFYQIQAHELVASRKLFELDGV 60
Query: 470 KRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIIT 529
K+T +TE TL+LIDI GCDMEE KDE +S+ NEGEA +A+ HA++L++SGV A DIGI+T
Sbjct: 61 KKTPATEHTLVLIDICGCDMEESKDETESSFNEGEARIAITHAQKLVESGVKAIDIGIVT 120
Query: 530 PYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRM 589
PYAAQV + + +L +E+ST+DGFQGREKEA+IISMVRSN KKEVGFLSD+RRM
Sbjct: 121 PYAAQVSIYCFRVCVEQRLLEVEISTIDGFQGREKEAMIISMVRSNDKKEVGFLSDKRRM 180
Query: 590 NVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
NVAVTRA+RQCC++CD++TV D FLKRL++YFE+H EY G Y
Sbjct: 181 NVAVTRAKRQCCVICDSDTVGKDSFLKRLLDYFEKHGEYCYGLYY 225
>gi|374586342|ref|ZP_09659434.1| AAA ATPase [Leptonema illini DSM 21528]
gi|373875203|gb|EHQ07197.1| AAA ATPase [Leptonema illini DSM 21528]
Length = 646
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 212/649 (32%), Positives = 327/649 (50%), Gaps = 51/649 (7%)
Query: 16 QEFVSVMAPLIDLEK-EAEISASITSGASRNLDTAQKK--GSTILNLKCVDAQTGLMGKT 72
+E +V++ L+D EK E A + G L AQKK G + L+ + G+
Sbjct: 9 EELQAVLSALLDEEKAERAEHADLMKG----LSLAQKKAEGLAVYPLRFQEGIIYRGGRW 64
Query: 73 LLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEE 132
L F+ H +H + P K + G+ R+ ++I V DD P+
Sbjct: 65 KLRFE---------HDPLSHRITEGAPVKL-FRDDEVTDGIAVRISSAAIDVVVDDYPDW 114
Query: 133 GLNSPLRLEKLANEVTYRRMKDALIQL-----SKGVQNGPAAGLIPVLFGEQKPTVLKKD 187
+RLE ++T+R M+ AL Q+ KG + G A L L G + + L
Sbjct: 115 IEEGKIRLEASFPDLTWREMRFALQQMLEAEDQKG-EKGQRARLRDRLLGYTELSALT-- 171
Query: 188 IAFKPFNSN-LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILAC 246
+ +P SN L+ SQ +A++ L++ + ++HGPPGTGKTTT+V I +R +L C
Sbjct: 172 LESEPHRSNELNASQDEAVTGILNTPDFAVVHGPPGTGKTTTLVAAIAALYRREESVLVC 231
Query: 247 AASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
AA+N AVD + +L + ++R+GHPAR+ L+ ++ + L + R E
Sbjct: 232 AATNAAVDLLALKLDEQGIPVLRIGHPARVYDAAQALTLEGRMESRSEAKLLAKYRAEAA 291
Query: 307 ALNGKLLKTK------DKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA 360
L + + + ++ R + E R L K R+ ++ A+ D+I+ VV TLTGA
Sbjct: 292 QLFRQARRFRRSFGAAERAERESLFAEYRALQKTIREMEKTALGDIIERTPVVCATLTGA 351
Query: 361 VSRKLDNTSFDLVIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGL 419
+ F V+IDEA QALE AC+I LLK R I+AGDH QL P ++ L
Sbjct: 352 SHPSIREKRFTTVVIDEATQALEPACYIPLLKNPERIIMAGDHQQLAPLIR---LPASPL 408
Query: 420 GRTLFERLADLYGDE-VTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS----- 473
TLF ++ + + D L QYRM I+ +S+++ Y ++ H S + R
Sbjct: 409 SETLFAKMIERHKDSGRVFFLNEQYRMQPVILGFSNQRFYEGRLVTHDSVLNRPPMRMKP 468
Query: 474 ----STEPTLLLIDIAGCDMEEKKD-EEDSTMNEGEAEVAMAHAKRLIQSGVHASD-IGI 527
S +LL +D AG D E++D + +S N EA + + +R+++ G + + +
Sbjct: 469 EAEVSLTGSLLFVDTAGSDATEEQDADSESRFNRFEAMLLVRIVERMLRLGEDDPESVAL 528
Query: 528 ITPYAAQVVLLKILRSKDDKL---KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLS 584
I PY AQV LL+ L S L + +EV TVD FQG E++ I +S R+N + E+GFL
Sbjct: 529 IAPYRAQVDLLRSLCSDVATLPTGQAIEVDTVDSFQGAERDWIGVSFTRNNEEAEIGFLK 588
Query: 585 DRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSE 633
D RR NVA+TRARR+ LV D+ T+S F LI Y + + Y S E
Sbjct: 589 DLRRTNVAMTRARRRLILVGDSTTLSMHPFYADLIAYAQSESSYFSVWE 637
>gi|418711069|ref|ZP_13271835.1| AAA domain protein [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410768669|gb|EKR43916.1| AAA domain protein [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|456972499|gb|EMG12888.1| AAA domain protein [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 634
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 202/650 (31%), Positives = 335/650 (51%), Gaps = 37/650 (5%)
Query: 5 KTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITS--GASRNLDTAQKKGSTILNLKCV 62
K + ++S EFV +LE+E + SI S SR + ++G T+ +
Sbjct: 2 KDRNFSDSISELEFVKT-----ELEREKKEEDSIFSKDWLSRPIPDRVRQGITLYPIVYE 56
Query: 63 DAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSI 122
+ G G +L F+ + + P KF T V L N+ + ++ L I
Sbjct: 57 EQTLGREGNWILTFRFSNQEEYPI-KFQTGAPVQLGKNEDR------AKAILVSLHKEKI 109
Query: 123 TVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPT 182
++ +++PE L+ L +E +Y+ M +AL + + +L G KP
Sbjct: 110 KISIEEVPEWAEEGKCFLDLLPDETSYKEMFNALDAVRLATKGTRLYVNRELLLGYGKPD 169
Query: 183 VL--KKDIAFKPF---NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV 237
++ + F+ +++L+ SQK+A+ ++ S++V ++HGPPGTGKTTT+ EI+ Q V
Sbjct: 170 LISTRDSDHFRILGRISTSLNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLV 229
Query: 238 KRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSL 297
KIL A +N A D + E + + ++RLGHPAR+ + S LD ++ + L
Sbjct: 230 AEEKKILVSAPTNSACDLLAESISARGILVLRLGHPARINEIAIHSTLDYKLFHHPDGKL 289
Query: 298 ASDIRKEMKALNGKLLK------TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNAD 351
++ RK++ ++ + K K++ R++ E++ L K R + + ++ +
Sbjct: 290 LNEYRKDVIEISKQAKKFKRNFGEKEREERKKFFTEVKELKKTIRSMEIGLIDSLVSSHP 349
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
V+++T + L+N +FD ++DE++QALE A WI +LK R ILAGDH QLPPT+ S
Sbjct: 350 VIVSTPVASARGILENRTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS 409
Query: 412 VEAEKKGLGRTLFER-LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK 470
EK L TLFE+ + +L +L QYRM + I + SK+ Y+ +K+ S +
Sbjct: 410 ---EKNYLETTLFEKAVENLESYGRVFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSEKE 466
Query: 471 RTSSTEPTLLL------IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD 524
R S+ T ID +G D EE +DS N EA++ + L ++ +
Sbjct: 467 RKSNFPKTFPFLNAFQWIDTSGTDSEEVI-LDDSISNPFEADLQVRLCFLLKENDWPEDE 525
Query: 525 IGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLS 584
I I++PY AQV L+ + +D L + VST+D FQGRE I++ VRSN + GFL
Sbjct: 526 ITILSPYRAQVRLIS-EKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGRSGFLK 584
Query: 585 DRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
+ RR+NV +TRAR + D+ T+S D FL +LI + EE + + E+
Sbjct: 585 ESRRINVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEKEVFRTAWEF 634
>gi|421118364|ref|ZP_15578704.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410009997|gb|EKO68148.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
Length = 634
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 193/612 (31%), Positives = 319/612 (52%), Gaps = 34/612 (5%)
Query: 43 SRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKA 102
SR + ++G T+ + + G G +L F+ + + P KF T V L N+
Sbjct: 37 SRPIPDRVRQGITLYPIVYEEQTLGREGNWILTFRFSNQEEYPI-KFQTGAPVQLGKNED 95
Query: 103 DLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKG 162
+ ++ L I ++ +++PE L+ L +E +Y M +AL +
Sbjct: 96 R------AKAILVSLHKEKIKISIEEVPEWAEEGKCFLDLLPDETSYLEMFNALDAVRLA 149
Query: 163 VQNGPAAGLIPVLFGEQKPTVLK-----KDIAFKPFNSNLDHSQKDAISKALSSKNVFML 217
+ +L G KP ++ + +++L+ SQK+A+ ++ S++V ++
Sbjct: 150 TKGTRLYVNRELLLGYGKPDLISTRDSDRSRILGRISTSLNESQKNAVIHSVLSEDVMII 209
Query: 218 HGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLL 277
HGPPGTGKTTT+ EI+ Q V KIL A +N A D +VE + + ++RLGHPAR+
Sbjct: 210 HGPPGTGKTTTLTEIVSQLVAEEKKILVSAPTNSACDLLVESISTRGILVLRLGHPARVN 269
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK------TKDKNTRREIQKELRTL 331
+ S LD ++ + L ++ RK++ ++ + K K++ R+++ E++ L
Sbjct: 270 EIAIHSTLDYKLFHHPDGKLLNEYRKDVIEISKQAKKFKRNFGEKEREERKKLFTEVKEL 329
Query: 332 SKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL 391
K R + + ++ + V+++T + L+N +FD ++DE++QALE A WI++L
Sbjct: 330 KKTIRSMEIGLIDSLVSSHPVIVSTPVASARGILENRTFDFCVLDESSQALEPAFWISIL 389
Query: 392 KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA---DLYGDEVTSMLTVQYRMHEH 448
K R ILAGDH QLPPT+ S EK L TLFE+ A + YG +L QYRM +
Sbjct: 390 KSDRVILAGDHKQLPPTLFS---EKNYLETTLFEKAAENLESYGR--VFLLDTQYRMKDE 444
Query: 449 IMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLL------IDIAGCDMEEKKDEEDSTMNE 502
I + SK+ Y+ +K+ S +R S+ T ID +G D EE +DS N
Sbjct: 445 ISAFPSKEFYSGLLKSGRSEKERKSNFPKTFPFSNAFQWIDTSGTDSEEVI-LDDSISNP 503
Query: 503 GEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGR 562
EA++ + L ++ +I I++PY AQV L+ + +D L + VST+D FQGR
Sbjct: 504 FEADLQVRLCFLLKENDWPEDEITILSPYRAQVRLIS-EKLRDVGLTKINVSTIDSFQGR 562
Query: 563 EKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
E I++ VRSN + GFL + RR+NV +TRAR + D+ T+S D FL +LI +
Sbjct: 563 ENRCILLGFVRSNLEGRSGFLKESRRINVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFA 622
Query: 623 EEHAEYLSGSEY 634
EE + + E+
Sbjct: 623 EEKEVFRTAWEF 634
>gi|418667848|ref|ZP_13229253.1| AAA domain protein [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410756293|gb|EKR17918.1| AAA domain protein [Leptospira interrogans serovar Pyrogenes str.
2006006960]
Length = 634
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 202/650 (31%), Positives = 335/650 (51%), Gaps = 37/650 (5%)
Query: 5 KTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITS--GASRNLDTAQKKGSTILNLKCV 62
K + ++S EFV +LE+E + SI S SR + ++G T+ +
Sbjct: 2 KDRNFSDSISELEFVKT-----ELEREKKEEDSIFSKDWLSRPIPDRVRQGITLYPIVYE 56
Query: 63 DAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSI 122
+ G G +L F+ + + P KF T V L N+ + ++ L I
Sbjct: 57 EQTLGREGNWILTFRFSNQEEYPI-KFQTGAPVQLGKNEDR------AKAILVSLHKEKI 109
Query: 123 TVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPT 182
++ +++PE L+ L +E +Y+ M +AL + + +L G KP
Sbjct: 110 KISIEEVPEWAEEGKCFLDLLPDETSYKEMFNALDAVRLATKGTRLYVNRELLLGYGKPD 169
Query: 183 VL--KKDIAFKPF---NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV 237
++ + F+ ++ L+ SQK+A+ ++ S++V ++HGPPGTGKTTT+ EI+ Q V
Sbjct: 170 LISTRDSDHFRILGRISTFLNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLV 229
Query: 238 KRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSL 297
KIL A +N A D +VE + + ++RLGHPAR+ + S LD ++ + L
Sbjct: 230 AEEKKILVSAPTNSACDLLVESISARGILVLRLGHPARINEIAIHSTLDYKLFHHPDGKL 289
Query: 298 ASDIRKEMKALNGKLLK------TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNAD 351
++ RK++ ++ + K K++ R+++ E++ L K R + + ++ +
Sbjct: 290 LNEYRKDVIEISKQAKKFKRNFGEKEREERKKLFTEVKELKKTIRSMEIGLIDSLVSSHP 349
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
V+++T + L+N +FD ++DE++QALE WI +LK R ILAGDH QLPPT+ S
Sbjct: 350 VIVSTPVASARGILENRTFDFCVLDESSQALEPTFWIPILKSDRVILAGDHKQLPPTLFS 409
Query: 412 VEAEKKGLGRTLFER-LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK 470
EK L TLFE+ + +L +L QYRM + I + SK+ Y+ +K+ S +
Sbjct: 410 ---EKNYLETTLFEKAVENLESYGRIFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSEKE 466
Query: 471 RTSSTEPTLLL------IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD 524
R S+ T ID +G D EE +DS N EA++ + L ++ +
Sbjct: 467 RKSNFPKTFPFLNAFQWIDTSGTDSEEVI-LDDSISNPFEADLQVRLCFLLKENDWPEDE 525
Query: 525 IGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLS 584
I I++PY AQV L+ + +D L + VST+D FQGRE I++ VRSN + GFL
Sbjct: 526 ITILSPYRAQVRLIS-EKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGRSGFLK 584
Query: 585 DRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
+ RR+NV +TRAR + D+ T+S D FL +LI + EE + + E+
Sbjct: 585 ESRRINVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEKEVFRTAWEF 634
>gi|330995988|ref|ZP_08319882.1| putative DNA helicase [Paraprevotella xylaniphila YIT 11841]
gi|329573985|gb|EGG55563.1| putative DNA helicase [Paraprevotella xylaniphila YIT 11841]
Length = 659
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 183/517 (35%), Positives = 285/517 (55%), Gaps = 51/517 (9%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN-SNLDHSQKD 203
+E TYR M +AL ++S ++G A L + G T F+P L+ +Q+
Sbjct: 147 DETTYRLMFEALDRVS-AARHGRLAELRDIFHG----TAQAGHFTFQPVRFPWLNPTQET 201
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A+++ L +K+V ++HGPPGTGKTTT+VE I + + R S++L CA SN+AVD I E+L
Sbjct: 202 AVNEVLRAKDVMIVHGPPGTGKTTTLVEAIYETLHRESQVLVCAQSNMAVDWISEKLTDR 261
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
V ++R+G+P+R+ ++L + + + IRK ++ L + + R
Sbjct: 262 GVAVLRIGNPSRVNDKMLSFTYERRFEAHPSYPSLWAIRKAIRDLYAH----RPSSGREA 317
Query: 324 IQKELRTLSKEERKRQQLAVTDVIKN-ADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQAL 382
+++ L ++ ++A+ + + N V+ TLTG+ +R L F + IDEAAQAL
Sbjct: 318 FHQKIARL-RDRATELEIAINESLFNETRVIACTLTGSANRVLAGKKFSTLFIDEAAQAL 376
Query: 383 EIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQ 442
E +CWIA+ K R ILAGDH QLPPTV+ EA K GL RTL E +A V S+L Q
Sbjct: 377 EASCWIAIQKAGRVILAGDHRQLPPTVKCPEAMKGGLDRTLMETIAARQPSAV-SLLRTQ 435
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKR-------------TSSTEPTLLLI------- 482
YRM++ IM++SS+ Y+ K+++ P R T+ E T +
Sbjct: 436 YRMNDAIMHFSSECFYDGKVESAPEVKYRGILDWDTPMEWIDTADEEQTAPYLTEEPSNP 495
Query: 483 ------DIAGC-DMEEKKDEEDSTM-NEGEAEVAM----AHAKRLIQSGVHAS--DIGII 528
AG D EE ++ + ++ N EA + + A+ +++ + + A D G+I
Sbjct: 496 VSAPAPPTAGIPDFEETRNPDSTSRSNPEEARLTLNILKAYFQKIGKERILAERIDTGLI 555
Query: 529 TPYAAQVVLLKILRSKDDKLKN----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLS 584
+PY QV LL+ L +D K + V+TVDGFQG+E++ I+IS+VRSN ++GFL
Sbjct: 556 SPYKGQVQLLRTLLRRDAFFKPYRHLLSVNTVDGFQGQERDVILISLVRSNENGQIGFLH 615
Query: 585 DRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEY 621
D RRMNVA+TRAR + LV ++ T+ F K + Y
Sbjct: 616 DLRRMNVAITRARMKLILVGNSHTLCRTPFYKLMYSY 652
>gi|340624895|ref|YP_004743348.1| putative DNA helicase [Methanococcus maripaludis X1]
gi|339905163|gb|AEK20605.1| putative DNA helicase [Methanococcus maripaludis X1]
Length = 633
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 205/633 (32%), Positives = 333/633 (52%), Gaps = 101/633 (15%)
Query: 53 GSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAH----KFGTHDV----VVLKPNKADL 104
G ILNL GK + EF G+ + + KF D+ +VL L
Sbjct: 41 GRAILNLN---------GKVIREFF---GEYIVRYGRSEKFKKTDISVGDIVLISKGNPL 88
Query: 105 GSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQ 164
S LG V + + + V+ + +P+ LN +R++ N+VT++RM +AL +
Sbjct: 89 QSDLLG--TVIEIGSNHVDVSMEIVPKWALND-IRIDLYVNDVTFKRMLNALDKF----- 140
Query: 165 NGPAAGLIPVLFGEQKPTVLKK-DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGT 223
N LI ++ P K +I F + L+ QK+A+ +ALS+++++++HGPPGT
Sbjct: 141 NSTDNRLIDIILSVDSPQKSKTTEIRF--LDYRLNEYQKEAVLEALSARDLYLIHGPPGT 198
Query: 224 GKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR-VRLVRLGHPARLLPQVLE 282
GKT+T+ E+ILQE R +K++A A SNIAVDNI+ + H ++VR+GHP+R+ ++++
Sbjct: 199 GKTSTISEVILQEALRKNKVIATADSNIAVDNILSNISKHESFKIVRIGHPSRISKKLMK 258
Query: 283 SALDAQVLRGDNSS----LASDIRKEMKALNGKLLKTKDKNTRR-----------EIQKE 327
+L ++ N S L +D++K K + D RR ++ K+
Sbjct: 259 YSLQNKITEHPNYSTLVKLKTDLQKNYDL--RKNFQRPDPKWRRGMSNDDIIIFSKLNKD 316
Query: 328 LRTLSKEE---------------------RKRQQLAVTDVIKNADVVLTTLTGAVSRKLD 366
+R + KE +K ++ + D+I +DVV+ T + A S L+
Sbjct: 317 IRGIPKETIKQMADWVICSENIAKTKENVQKFEKKLIDDIISTSDVVVATNSMAGSEILE 376
Query: 367 NTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFER 426
+ FD+ +IDE +Q+ E + I +++ + I+AGDH QLPPTV S E E L +TLFER
Sbjct: 377 DYKFDVCVIDEGSQSTEPSSLIPIVRSRKLIIAGDHKQLPPTVLSDELE---LKKTLFER 433
Query: 427 LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSG--------VKRTSS---- 474
+ + E + +L VQYRM+E IM +S++ Y +K+ AH S V+ S+
Sbjct: 434 MIQDHP-EFSKILQVQYRMNEKIMEFSNEMFYENKLIAHESVKSQNLIEIVENVSNEDKD 492
Query: 475 --TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYA 532
E TL I++ G EEK++ S+ N EAE + +L + + S +ITPY
Sbjct: 493 IINEKTLQFINVDG---EEKQNSFKSSYNVEEAEKVLEIVSKLQKYEIPVS---VITPYD 546
Query: 533 AQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVA 592
AQV + + + D ++V +VDGFQGRE E I+IS VR++ ++GFL D RR+NVA
Sbjct: 547 AQVKYISKMLNTD----KIDVKSVDGFQGRENEVIVISFVRTS---KMGFLKDLRRLNVA 599
Query: 593 VTRARRQCCLVCDTETVSSDGFLKRLIEYFEEH 625
VTRA+R+ +V + D + + F ++
Sbjct: 600 VTRAKRKLIVVGSKNLLIKDDAYSKFLNCFNDN 632
>gi|324508684|gb|ADY43663.1| DNA-binding protein SMUBP-2, partial [Ascaris suum]
Length = 680
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 174/474 (36%), Positives = 260/474 (54%), Gaps = 65/474 (13%)
Query: 172 IPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALS-SKNVFMLHGPPGTGKTTTVV 230
+PV+ ++K ++K L+ Q+ A++ AL+ S+ + + GPPGTGKT V+
Sbjct: 216 MPVVHRDRKLQCIQK----------LNDDQQRAVAAALNRSRPIVTIQGPPGTGKTAVVI 265
Query: 231 EIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQV- 289
EIILQ ++ K+L CA SN+A++NI+ R+ R + +LD +
Sbjct: 266 EIILQAIRTKQKVLVCAPSNLAIENIIGRI--------------RGETEASRMSLDPSIS 311
Query: 290 ----LRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTD 345
L+ NS SD+ + + LN + T D + R+I +E L RK
Sbjct: 312 MEEDLKQHNS--YSDLLRLYEQLNESIRLTGDSSITRKISQEATRLRDSMRK-------S 362
Query: 346 VIKNADVVLTTLTGAVSRKLDNTSF--DLVIIDEAAQALEIACWIALLKGSRCILAGDHL 403
V+ V+L T++ L F D+VI+DEAAQA+E A W+ LL+ RC+LAGDH
Sbjct: 363 VVVEKQVILCTVSSGSLHTLRGLGFFPDVVIVDEAAQAMECATWVPLLQAPRCVLAGDHC 422
Query: 404 QLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK 463
QLP + S EA +GLG +L E L +G V L+VQ+RM+E IM WS+ Y SK++
Sbjct: 423 QLPTVLHSSEAISQGLGTSLMETLDKEFGSVVKHFLSVQHRMNEKIMRWSADYFYESKLQ 482
Query: 464 AHPS--GVKRTSST---------EPTLLLIDIA------GCDMEEKKDEEDSTMNEGEAE 506
AH S G+ + + EP LL+ID G + ++ + S N GEAE
Sbjct: 483 AHRSVAGISLSDISAIDGSDLMNEP-LLMIDTHSVSRQRGLSVSVERIHQQSYRNHGEAE 541
Query: 507 VAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEA 566
+ A+ + L++ GV D+G+I+PY AQV LL+ L V+TVDGFQG+++E
Sbjct: 542 IVCAYVQFLMRKGVRQCDVGVISPYFAQVELLR------KTLGEEIVNTVDGFQGQQREV 595
Query: 567 IIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
I++S+VR+N + +GFLSD RR+NVAVTRARRQ LV + + L+ L+E
Sbjct: 596 IVMSLVRNNYEGRIGFLSDARRLNVAVTRARRQFLLVGSSSMMRHAEHLRSLLE 649
>gi|150399643|ref|YP_001323410.1| putative DNA helicase [Methanococcus vannielii SB]
gi|150012346|gb|ABR54798.1| putative DNA helicase [Methanococcus vannielii SB]
Length = 633
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 223/648 (34%), Positives = 337/648 (52%), Gaps = 102/648 (15%)
Query: 16 QEFVSVMAPLIDLEKEAEIS---ASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
Q +V+ L+ E++ EIS I + D G ILNLK GK
Sbjct: 5 QIYVNKYKELVKRERDYEISFHREEIKKMGEKREDI----GRAILNLK---------GKI 51
Query: 73 LLEFQSTKGDVLPAH----KFGTHDV----VVLKPNKADLGSPALGQGVVYRLKDSSITV 124
L EF G+++ + KF D+ +VL + L S LG V + + I +
Sbjct: 52 LREFY---GELIVRYSRKEKFKKTDISVGDIVLISREEPLQSDLLG--TVVEIGSNYIDI 106
Query: 125 AFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVL 184
+ + IP+ +R++ N+VT++RM AL L + N LI ++ PT
Sbjct: 107 SLESIPKWAF-VDIRIDLYVNDVTFKRMIKALENLV-NLDNR----LIDIILEIDSPTK- 159
Query: 185 KKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKIL 244
K + + + L+ QK+A+ ALS+++++++HGPPGTGKT T+ EIILQE R +KI+
Sbjct: 160 SKPLNIELIDKTLNDYQKNAVISALSARDLYLIHGPPGTGKTKTISEIILQEAFRKNKII 219
Query: 245 ACAASNIAVDNIVERLVPH-RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
A A SNIAVDNI+ L + ++VR+GHP+R+ ++LE +L Q+L+ + S +RK
Sbjct: 220 ATADSNIAVDNILSNLSKYPDFKIVRIGHPSRISKKLLEYSLYEQILKHEKYEKLSILRK 279
Query: 304 EM-------KALNGKLLKTKDKNTRREI------QKELRTLSKEERKRQQ---LAVTDVI 347
E+ K LN LK K + +I K++R + K E K+ LA +
Sbjct: 280 ELHKNYEFKKNLNRPDLKWMRKLSNDDIIIFSKLDKDIRGIPKLEIKKMADWILATEKIE 339
Query: 348 KNADVV------------------LTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIA 389
K + + L+T + A S L+N FD+ IIDE +Q++E + I
Sbjct: 340 KLKENIEKIEKSIIDSIISSSSIILSTNSMAGSEILENYRFDVCIIDEGSQSMEPSALIP 399
Query: 390 LLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHI 449
+ + I++GDH QLPPTV S E E L +TLFERL Y E + +L +QYRM+E I
Sbjct: 400 ISLSRKLIISGDHKQLPPTVISNEIE---LKKTLFERLISKYP-EFSKVLQIQYRMNEKI 455
Query: 450 MNWSSKQLYNSKIKAHPS--------GVKRTSSTEPTLL------LIDIAGCDMEEKKDE 495
M +S+K Y I +H S VK S + +L IDI G +E K++
Sbjct: 456 MEFSNKMFYGEMIVSHSSIKHQNLMEIVKNIESFDSEILNDMPLQFIDIDG---KELKNK 512
Query: 496 EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVST 555
S N EAE + K+ + V S +ITPY AQV + L + D+ +EV +
Sbjct: 513 FKSYYNILEAEKVLEVVKKFQKYNVPVS---VITPYDAQVKYISGLINSDE----IEVKS 565
Query: 556 VDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLV 603
+DGFQGRE E II+S+VR+N ++GFL D RR+NVA+TRA+R+ ++
Sbjct: 566 IDGFQGRENEVIILSLVRTN---KLGFLKDLRRLNVAITRAKRKLVVI 610
>gi|150402752|ref|YP_001330046.1| putative DNA helicase [Methanococcus maripaludis C7]
gi|150033782|gb|ABR65895.1| putative DNA helicase [Methanococcus maripaludis C7]
Length = 633
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 206/635 (32%), Positives = 331/635 (52%), Gaps = 105/635 (16%)
Query: 53 GSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAH----KFGTHDVVVLKPNKADLGSPA 108
G ILNL GK L EF G+ + + KF D+ V G+P
Sbjct: 41 GRAILNLN---------GKVLREFF---GEYIVRYGRREKFKKTDISVGDVVLVSRGNPL 88
Query: 109 LGQ--GVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNG 166
G V + + + V+ +++P+ LN +R++ N+VT++RM +AL + N
Sbjct: 89 QSDLLGTVIEIGSNHVDVSMENVPKWALND-IRIDLYVNDVTFKRMLNALDKF-----NS 142
Query: 167 PAAGLIPVLFGEQKPTVLKK-DIAFKPFNSNLDHS----QKDAISKALSSKNVFMLHGPP 221
LI ++ G P KK +I F LDHS QK+A+ +AL++++++++HGPP
Sbjct: 143 TDNRLIDIILGVDGPKQSKKTEIRF------LDHSLNEYQKEAVLEALAARDLYLIHGPP 196
Query: 222 GTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR-VRLVRLGHPARLLPQV 280
GTGKT T+ E+ILQE R +K++A A SNIAVDNI+ + + ++VR+GHP+R+ ++
Sbjct: 197 GTGKTRTISEVILQEALRKNKVIATADSNIAVDNILSNISKYESFKIVRIGHPSRISKKL 256
Query: 281 LESALDAQVLRGDNSS----LASDIRKEMKALNGKLLKTKDKNTRR-----------EIQ 325
++ +L ++ N + + D++K + K K D RR ++
Sbjct: 257 MKYSLQNKITEHPNYNTLKKMKMDLQKNYEV--RKSFKRPDPKWRRGMTDDDIIIFSKLN 314
Query: 326 KELRTLSKEERKR---------------------QQLAVTDVIKNADVVLTTLTGAVSRK 364
K++R + KE K+ ++ + D+I +DVV+ T + A S
Sbjct: 315 KDIRGVPKETIKKMADWVICSENIVKLKENIQKFEKKLIDDIISTSDVVVATNSMAGSEI 374
Query: 365 LDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLF 424
L++ FD+ +IDE +Q++E + I ++ + I+AGDH QLPPTV S E E L +TLF
Sbjct: 375 LEDYKFDVCVIDEGSQSMEPSSLIPIVLSRKLIIAGDHKQLPPTVLSEELE---LKKTLF 431
Query: 425 ERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSG--------VKRTSSTE 476
ERL D + +L VQYRM+E IM +S++ Y +K+ AH S V+ S +
Sbjct: 432 ERLISENPD-FSKILQVQYRMNEKIMEFSNEMFYENKLIAHESVKSHNLLDIVENVSKED 490
Query: 477 PTLL------LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITP 530
++ I++ G +EK+D S+ N EAE +L + + S +ITP
Sbjct: 491 KDIVNKKPLQFINVNG---QEKQDSFKSSYNVEEAEKVDEIVSKLRKYEIPVS---VITP 544
Query: 531 YAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
Y AQV + + D+ +EV +VDGFQGRE E I+IS VR++ ++GFL D RR+N
Sbjct: 545 YDAQVKYISNKLNTDE----IEVKSVDGFQGRENEVIVISFVRTD---KMGFLKDLRRLN 597
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEH 625
VAVTRARR+ +V + D + + F ++
Sbjct: 598 VAVTRARRKLIVVGSKNLLIKDDAYSKFLNCFNDN 632
>gi|353227286|emb|CCA77799.1| related to HCS1-DNA helicase A [Piriformospora indica DSM 11827]
Length = 752
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 177/450 (39%), Positives = 252/450 (56%), Gaps = 56/450 (12%)
Query: 15 LQEFVSVMAPLIDLEKEAEISAS--ITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKT 72
L+ F L+ E++AEI + + S S L +KKG +L L V+ GL GK+
Sbjct: 7 LEAFFDRQRQLLAQERQAEIDQTSLLLSNCSAKL--LEKKGLALLGLGVVNVNIGLGGKS 64
Query: 73 LLEFQSTKG----DVLPAHKFGTHDVVVL--------KPNKADLGSPALG-------QGV 113
L+E + + P H F D+ + K +K+ +PA +GV
Sbjct: 65 LVELERPSAHHSSPLFPPHTFRPGDLARIDDASTTSKKASKSK--TPAAASKENFGVEGV 122
Query: 114 VYRLKDSSITVAFD----------DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSK-- 161
VY++ +S I +A D DIPE + + KLAN VTY RM A+ ++SK
Sbjct: 123 VYKVSNSRIIIAVDASRPGTNEDLDIPEHCI-----VVKLANTVTYDRMDQAVERMSKIM 177
Query: 162 -GVQNGPAA------GLIPVLFGEQKPTVLKKDIAFKPFNS-NLDHSQKDAISKALSSKN 213
G+ GP+ L VLFG+ P+ + FNS L+ SQK A+ AL++
Sbjct: 178 LGIA-GPSGNTQAPNALQRVLFGQSSPSRPDDIGTIQFFNSEGLNESQKRAVKLALAAPE 236
Query: 214 VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHP 273
+ ++HGPPGTGKT T+VE+ILQ V R L C ASN+AVDN++ERLVPH++ L+R+GHP
Sbjct: 237 IALIHGPPGTGKTHTLVEVILQLVARNKSCLVCGASNLAVDNLLERLVPHKIPLIRVGHP 296
Query: 274 ARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNT-----RREIQKEL 328
AR+L + ++ LD+Q R D + L +DI+KE+ L L R+++ E+
Sbjct: 297 ARVLNDLHDATLDSQAERSDQAQLVNDIKKEINDLMNTLSGGGKGKKPRGAERKKMYDEV 356
Query: 329 RTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWI 388
+ L KE RKR+ V+ V+ A +VL T GA R+L N +FD+VI+DEAAQALE CWI
Sbjct: 357 KELRKEYRKREGTIVSRVVDGAKIVLATCHGAGGRQLFNRAFDVVIVDEAAQALEAVCWI 416
Query: 389 ALLKGSRCILAGDHLQLPPTVQSVEAEKKG 418
+LK S+ ILAGD LQLPPTV S + +K G
Sbjct: 417 PILKASKLILAGDPLQLPPTVLSTKEKKSG 446
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 137/236 (58%), Gaps = 28/236 (11%)
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT-SST 475
K L TLF+R+ ++G E+ ML VQYRM+ I + S LY+SK+ + PS R +
Sbjct: 513 KSLEVTLFDRMEVMWGPEIKQMLDVQYRMNTRICAFPSATLYSSKLTSDPSVANRLLTDR 572
Query: 476 EPT-----------LLLIDIAGCDMEEKKD------------EEDSTMNEGEAEVAMAHA 512
+PT ++ D AGC+ E+ D +E S N E E+
Sbjct: 573 DPTNDAAQDTLGHPIVFFDTAGCEFFERVDGGDNEGKSTTLNDEGSKCNVNEVEIVKQWV 632
Query: 513 KRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMV 572
L+ G+ +I IITPY AQV LL + + +E+ TVDG QGREK+A++IS+V
Sbjct: 633 NDLVNYGIPPQEIAIITPYQAQVSLLSAALTS---IPGLEIGTVDGVQGREKDAVVISLV 689
Query: 573 RSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE 627
RSN K+EVGFL ++RR+NVA+TRAR+Q C+V D+ T+ +LK+ +E+ EE+A+
Sbjct: 690 RSNDKREVGFLKEKRRLNVAMTRARKQLCIVGDSSTIRHGSLYLKKWMEWLEENAD 745
>gi|45359144|ref|NP_988701.1| DNA helicase [Methanococcus maripaludis S2]
gi|45048019|emb|CAF31137.1| putative DNA helicase [Methanococcus maripaludis S2]
Length = 633
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 208/669 (31%), Positives = 347/669 (51%), Gaps = 100/669 (14%)
Query: 16 QEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKK-GSTILNLKCVDAQTGLMGKTLL 74
Q +V+ L+ E++ EI+ + L T ++ G ILNL GK +
Sbjct: 5 QIYVNKFKELVKKERDHEIN--FHKEEIKKLGTKRENVGRAILNLN---------GKVIR 53
Query: 75 EFQSTKGDVLPAH----KFGTHDV----VVLKPNKADLGSPALGQGVVYRLKDSSITVAF 126
EF G+ + + KF D+ +VL L S LG V + + + V+
Sbjct: 54 EFF---GEYIVRYGRSEKFKKTDISVGDIVLISKGNPLQSDLLG--TVIEIGSNHVDVSM 108
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
+ +P+ LN +R++ N+VT++RM +AL + N LI ++ P K
Sbjct: 109 EIVPKWALND-IRIDLYVNDVTFKRMLNALDKF-----NSTDNRLIDIILSVDSPQK-SK 161
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILAC 246
+ + L+ QK+A+ +AL++++++++HGPPGTGKT+T+ E+ILQE R +K++A
Sbjct: 162 TTEVRFLDYRLNEYQKEAVLEALAARDLYLIHGPPGTGKTSTISEVILQEALRKNKVIAT 221
Query: 247 AASNIAVDNIVERLVPHR-VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEM 305
A SNIAVDNI+ + H ++VR+GHP+R+ ++++ +L ++ N S ++ E+
Sbjct: 222 ADSNIAVDNILSNISKHESFKIVRIGHPSRISKKLIKYSLQTKITEHPNYSTLVKLKTEL 281
Query: 306 KALNGKLLKT---KDKNTRR-----------EIQKELRTLSKEE---------------- 335
+ N L K D RR ++ K++R + KE
Sbjct: 282 QK-NYDLRKNFQRPDPKWRRGMSNDDIIIFSKLNKDIRGIPKETIKQMADWVICSENIAK 340
Query: 336 -----RKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIAL 390
+K ++ + D+I +DVV+ T + A S L++ FD+ +IDE +Q+ E + I +
Sbjct: 341 TKENVQKFEKKLIDDIISTSDVVVATNSMAGSEILEDYKFDIAVIDEGSQSTEPSSLIPI 400
Query: 391 LKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIM 450
++ + I+AGDH QLPPTV S E E L +TLFER+ + E + +L VQYRM+E IM
Sbjct: 401 VRSRKLIIAGDHKQLPPTVLSDELE---LKKTLFERMIQEHP-EFSKILQVQYRMNEKIM 456
Query: 451 NWSSKQLYNSKIKAHPSG--------VKRTSS------TEPTLLLIDIAGCDMEEKKDEE 496
+S++ Y +K+ AH S V+ S+ E L I++ G EEK++
Sbjct: 457 EFSNEMFYENKLIAHESVKSQNLLEIVENVSNEDKDIINEKPLQFINVDG---EEKQNSF 513
Query: 497 DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTV 556
S+ N EAE + +L + + S +ITPY AQV + + + D ++V +V
Sbjct: 514 KSSYNVEEAEKVLEIVSKLQKYEIPVS---VITPYDAQVKYISKMLNTD----KIDVKSV 566
Query: 557 DGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLK 616
DGFQGRE E I+IS VR++ ++GFL D +R+NVAVTRA+R+ +V + D
Sbjct: 567 DGFQGRENEVIVISFVRTS---KMGFLKDLKRLNVAVTRAKRKLIVVGSKNLLIKDDAYS 623
Query: 617 RLIEYFEEH 625
+ + F ++
Sbjct: 624 KFLNCFNDN 632
>gi|374723515|gb|EHR75595.1| putative DNA helicase [uncultured marine group II euryarchaeote]
Length = 662
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 191/591 (32%), Positives = 311/591 (52%), Gaps = 42/591 (7%)
Query: 64 AQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSIT 123
+Q G+ +L F++ +G LP H+FG D+V++ ++A + +G+V + I
Sbjct: 73 SQGRFFGEPILVFENKQGSRLPIHRFGHGDIVLI--SRARPWGEKVIEGIVLDRGPTRIR 130
Query: 124 VAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGE----- 178
V + P++ RL++ AN V + RM +AL G L +L G
Sbjct: 131 VVVAEKPKDIRKGTWRLDRGANRVAHDRMHEALSTFHSSEGEGGTV-LRDLLLGSLHDMS 189
Query: 179 ---QKPTVLKKDIAFKPFN---SNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEI 232
+P ++ P L+ SQ+ A+ AL + + ++ GPPGTGKT T V +
Sbjct: 190 TSAARPPEIRGQKQRGPVGLAAMTLNPSQRAAVESALE-RRLTLIQGPPGTGKTHTAVHL 248
Query: 233 I--LQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVL 290
+ L + RG ILA A SN+AVDN++E L+ V+ VR+G P ++ + ++ LDAQ+
Sbjct: 249 LSALVNIGRGP-ILATAESNVAVDNLLEGLLELGVKAVRIGRPVKVREHLRQATLDAQIE 307
Query: 291 RGDNSSLASDIRKEMKALNGKL--LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIK 348
R +R++ L L LK K+K K++ KE R + + V+
Sbjct: 308 RHPLQEELRFVREQNDELRRSLSGLKGKEKGM---AHKDVNRNFKEMRSIEANMIASVLD 364
Query: 349 NADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPP 407
A+V+ T G + L + F +V++DEA QA E + + + +G R +L GDH QLPP
Sbjct: 365 GAEVICATTIGVGHKLLRDRRFPVVLMDEATQASEPSALVPITRGCRQLVLVGDHKQLPP 424
Query: 408 TVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS 467
TV S A++ GLG++LFERL + D T MLT QYRMH I + S + Y ++ +
Sbjct: 425 TVISEAAQQGGLGQSLFERLTECGLD--THMLTTQYRMHPTIREYPSARFYEDRLDDGCT 482
Query: 468 GVKRTSST-------EPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG- 519
R + + + + I G ++ +++ S ++E +++ + L+ +G
Sbjct: 483 PADRPPAAGFLWPDWDHPVAFVPIDGSEIVDEEGSSKSNLDEAAKVLSIVNG--LLSAGD 540
Query: 520 VHASDIGIITPYAAQVVLLKIL------RSKDDKLKNMEVSTVDGFQGREKEAIIISMVR 573
+ +DIG+ITPY+ QV LL L R + +E+ +VDG+QGREKE I+ S VR
Sbjct: 541 LTPADIGVITPYSGQVRLLVDLFEQAGGREEGAPYAGLEIKSVDGYQGREKEIIVFSAVR 600
Query: 574 SNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+N E+GFL DRRR+NVA+TRARR ++ +T+T+ DG + +++ EE
Sbjct: 601 ANEHGEIGFLRDRRRLNVAITRARRGLIVLGNTKTLRHDGTWRAWLDWAEE 651
>gi|260939808|ref|XP_002614204.1| hypothetical protein CLUG_05690 [Clavispora lusitaniae ATCC 42720]
gi|238852098|gb|EEQ41562.1| hypothetical protein CLUG_05690 [Clavispora lusitaniae ATCC 42720]
Length = 733
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 165/414 (39%), Positives = 234/414 (56%), Gaps = 57/414 (13%)
Query: 266 RLVRLGHPARLLPQVLESALDAQVLR-------GDNSSLASDIRKEMKALNGKLLKTKDK 318
+L+R+GHPARLLP L+ +LD VL GD S+ DI K++ + G++ K K
Sbjct: 319 KLIRVGHPARLLPCNLQHSLD--VLSKSSYGDSGDERSILRDIEKDIGSTLGQIKKCKRY 376
Query: 319 NTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS--------- 369
RR++ EL+ L +E R R++ V D++ NA VVL TL G+ S +L S
Sbjct: 377 GERRQLWTELKQLKRELRTREKKIVRDLLVNAQVVLATLHGSGSNELFAVSKEFSPAEPF 436
Query: 370 FDLVIIDEAAQALEIACWIALLKG---SRCILAGDHLQLPPTVQSVEA----EKKG---- 418
FD ++IDE +Q+LE CWI LL R ++AGD++QLP TV+S E + KG
Sbjct: 437 FDTLVIDEVSQSLEPQCWIPLLAHLGIRRLVIAGDNMQLPATVKSREEAMALQHKGSKVA 496
Query: 419 -LGRTLFERLAD-LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS--------- 467
L TLF+RL D L+G E +L VQYRM+E IM + S+ LYN +++A
Sbjct: 497 DLEYTLFDRLVDKLHGSEYKKLLNVQYRMNEKIMEFPSRTLYNGELRAAAGVRDILLCDL 556
Query: 468 -GVKRTSSTEPTLLLIDIAGCDMEEKKDE--------EDSTMNEGEAEVAMAHAKRLIQS 518
V+ T T + +D G D E+ D+ S +N GE V H + L+ +
Sbjct: 557 PNVQSTDETSVPCMWLDTQGGDFPEQADDAGANHFSGSGSKLNPGEVAVVQRHVQALVDA 616
Query: 519 GVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK 578
GV A+ IG+I+PY+AQ LL+ + +EV+TVDGFQGREKEAI++S+VRSN +
Sbjct: 617 GVDAASIGVISPYSAQTALLRKMACM---FGPVEVATVDGFQGREKEAIVLSLVRSNDNR 673
Query: 579 EVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
EVGFL DRRR+NVA+TR +R C+V D + + G + + E A Y S
Sbjct: 674 EVGFLQDRRRLNVAMTRPKRHLCVVGDMALLDACG-----VRFLSEWARYADSS 722
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 135/252 (53%), Gaps = 19/252 (7%)
Query: 26 IDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLP 85
I+LE++A++ + + + + G ++NL + +TGL GKTL+E P
Sbjct: 13 IELEQKADMLLTASYLEAYSPKKLASFGLAVVNLVMQNMRTGLGGKTLVELALDPAVSRP 72
Query: 86 AHKFGTHDVVVLKPNKAD-LGSPALG----QGVVYRLKDSSITVAFD-DIPEEGL----- 134
+ + V + D +G+ + +GV+ RL ++TV+ D D +E L
Sbjct: 73 EEEISPGSLRVGDIVRIDRMGNSSEDKTSLEGVITRLSGKALTVSVDEDANDETLLGLYN 132
Query: 135 -----NSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIA 189
N + + KL N +TY+RM A+ +L + + + + ++ +L GE + T K
Sbjct: 133 NTGSDNVRMSVVKLTNSITYKRMMQAMKKL-EDLADADKSEVVRLLLGEARYTPRPKKGP 191
Query: 190 FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQ-EVKRGSKILACAA 248
+ F+ +L+ SQ A+ ALSS + ++HGPPGTGKT T++E+I Q G ++L C A
Sbjct: 192 WDVFDDSLNESQVSAVDFALSSP-IAIIHGPPGTGKTYTLIELIKQLTFNHGERVLVCGA 250
Query: 249 SNIAVDNIVERL 260
SNI+VDNI+ERL
Sbjct: 251 SNISVDNILERL 262
>gi|393786855|ref|ZP_10374987.1| hypothetical protein HMPREF1068_01267 [Bacteroides nordii
CL02T12C05]
gi|392658090|gb|EIY51720.1| hypothetical protein HMPREF1068_01267 [Bacteroides nordii
CL02T12C05]
Length = 634
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 160/446 (35%), Positives = 257/446 (57%), Gaps = 26/446 (5%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNI 256
L+ +Q++A++K L +K+V ++HGPPGTGKTTT+VE I + + R +++L CA SN AVD I
Sbjct: 192 LNSTQEEAVNKVLCTKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWI 251
Query: 257 VERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK 316
E+LV V ++R+G+P R+ ++L + + + IRK ++ ++G++ K
Sbjct: 252 SEKLVDRGVPVLRIGNPTRVNDKMLSFTYERRFESHPAYTELWGIRKSIREMSGRIRKGS 311
Query: 317 DKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIID 376
R ++ + L + + L + + VV +TL + R L+ F + ID
Sbjct: 312 HIE-RENMRNHISHLRDRATELEILINEALFSSTRVVASTLVSSNHRILNGRRFSTLFID 370
Query: 377 EAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT 436
EAAQALE ACWIA+ K R I AGDH QLPPT++ +EA + GL TL E++A V
Sbjct: 371 EAAQALEAACWIAIRKTDRVIFAGDHCQLPPTIKCIEAARGGLNHTLMEKVATNKPSSV- 429
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDM-EEKKD 494
S+L VQYRM+E IM + S+ YN+++++ P +R + ++ ID + + EE
Sbjct: 430 SLLKVQYRMNESIMRFPSEWFYNNQLESAPEIRQRGILDFDTPMIWIDTSEMECHEEFVG 489
Query: 495 EEDSTMNEGEAEVAMAHAKRLIQSGVHAS------DIGIITPYAAQVVLLKILRSKDDKL 548
E +N+ EA + + + IQ D G+I+PY AQV L+ +K+
Sbjct: 490 ESFGRINKPEANLLLQELESYIQKIGENRVLDEQIDFGLISPYKAQVQYLR------NKI 543
Query: 549 KN----------MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARR 598
K+ + V+TVDGFQG+E++ I IS+VR+N ++GFL+D RRMNVA+TRAR
Sbjct: 544 KSSSFFRRFRPLITVNTVDGFQGQERDVIFISLVRANESGQIGFLNDLRRMNVAITRARM 603
Query: 599 QCCLVCDTETVSSDGFLKRLIEYFEE 624
+ ++ + T+ F +L+EY ++
Sbjct: 604 KLVILGNAATLIKHTFYHKLMEYIQK 629
>gi|317504722|ref|ZP_07962683.1| DNA helicase [Prevotella salivae DSM 15606]
gi|315664160|gb|EFV03866.1| DNA helicase [Prevotella salivae DSM 15606]
Length = 649
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 284/503 (56%), Gaps = 29/503 (5%)
Query: 143 LANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQK 202
+E +Y+ M DAL ++ N A L + + Q+ + P+ L+ +Q+
Sbjct: 157 FFDETSYKCMFDALDRVINAKGN-RLAYLRDLFYSGQQAQRFTFESQRFPW---LNPTQE 212
Query: 203 DAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVP 262
A+++ L +K+V ++HGPPGTGKTTT+VE I + + + S++L CA SN+A+D I E+LV
Sbjct: 213 RAVNEVLWAKDVAVVHGPPGTGKTTTLVEAINETLMKESQVLVCAQSNMALDWISEQLVD 272
Query: 263 HRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRR 322
+ ++R+G+P R+ ++L + + + IRK ++ L ++ K
Sbjct: 273 RGINVLRVGNPTRVNDKMLGFTYERRFESHPDYPQLWAIRKAIREL-----RSHRKRGDE 327
Query: 323 EIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQAL 382
++ L + + +++ A VV +TL G+ +R L+ F + IDEAAQAL
Sbjct: 328 RFHQKFEHLKARATELEIRINSNLFDEARVVASTLVGSANRVLEGMKFGTLFIDEAAQAL 387
Query: 383 EIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQ 442
E ACWI + + +R +LAGDH QLPP V+S+ A K GLG++L ER+ + + +V ++L +Q
Sbjct: 388 EAACWIPMRRVTRVVLAGDHCQLPPMVKSIAALKAGLGKSLMERIVE-HKPDVVTLLKIQ 446
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKR--TSSTEPTLL----LIDIAGCDMEEKKDEE 496
YRM+E IM +SS Y+ ++++ P R EP + D G E E
Sbjct: 447 YRMNEKIMKFSSDWFYHGEVESAPQTRNRGILDLDEPIEWRDSKVDDEEGDSGESFVGES 506
Query: 497 DSTMNEGEAEVAMA----HAKRLIQSGV--HASDIGIITPYAAQVVLLKILRSKDDKLK- 549
+N+ EA++ + + K++ + + D+G+I+PY AQV L+ L K + K
Sbjct: 507 FGRINKAEAQLTLDTLEDYFKKIGKQRILDEHIDVGVISPYRAQVQYLRRLIRKRESFKP 566
Query: 550 ---NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 606
++ V+TVDGFQG+E++ I+IS+VRSN + ++GFL+D RRMNVA+TRAR + ++ D
Sbjct: 567 YRHSISVNTVDGFQGQERDIILISLVRSNDQGQIGFLNDLRRMNVAITRARMKLIILGDK 626
Query: 607 ETVSSDGFLKRL---IEYFEEHA 626
T+ F ++L IE EHA
Sbjct: 627 ATLCRHPFYRKLNEAIESTNEHA 649
>gi|134046854|ref|YP_001098339.1| putative DNA helicase [Methanococcus maripaludis C5]
gi|132664479|gb|ABO36125.1| putative DNA helicase [Methanococcus maripaludis C5]
Length = 633
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 184/564 (32%), Positives = 308/564 (54%), Gaps = 75/564 (13%)
Query: 112 GVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGL 171
G V + + + V+ + +P+ LN +R++ N+VT++RM +AL + N L
Sbjct: 94 GTVIEIGSNHVDVSMEVVPKWALND-IRIDLYVNDVTFKRMLNALDKF-----NSTDNRL 147
Query: 172 IPVLFGEQKPTVLKK-DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVV 230
I ++ G P KK +I F + +L+ Q++ + +AL +++++++HGPPGTGKT T+
Sbjct: 148 IDIILGLDGPKKSKKTEIRF--LDYSLNEYQQETVLEALGARDLYLIHGPPGTGKTRTIS 205
Query: 231 EIILQEVKRGSKILACAASNIAVDNIVERLVPHR-VRLVRLGHPARLLPQVLESALDAQV 289
E+ILQEV R +K++A A SNIAVDNI+ + + ++VR+GHP+R+ ++++ +L ++
Sbjct: 206 EVILQEVLRKNKVIATADSNIAVDNILSNISKYESFKIVRIGHPSRISKKLMKYSLQNKI 265
Query: 290 LRGDNSSLASDIRKEMKALNG--KLLKTKDKNTRR-----------EIQKELRTLSKEER 336
N S ++ +++ K K D RR ++ K++R + KE
Sbjct: 266 TEHPNYSTLKKMKMDLQKNYDLRKSFKRPDPKWRRGMTDDDIIIFSKLNKDIRGVPKETI 325
Query: 337 KR---------------------QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVII 375
K+ ++ + D++ +DVV+ T + A S L++ FD+ I
Sbjct: 326 KKMADWVICSENIAKLKENIQKFEKKIIDDIVSASDVVVATNSMAGSDILEDYKFDVCAI 385
Query: 376 DEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEV 435
DE +Q++E + I ++ + I+AGDH QLPPTV S E E L +TLFER+ + D
Sbjct: 386 DEGSQSMEPSSLIPIVISRKLIIAGDHKQLPPTVLSDELE---LKKTLFERMINENPD-F 441
Query: 436 TSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSG--------VKRTSS------TEPTLLL 481
+ +L VQYRM+E IM +S++ Y +K+ AH S V+ S+ E +L
Sbjct: 442 SKILQVQYRMNEKIMAFSNEMFYENKLIAHESVKSHNLLEIVENISNEDKYIINEKSLQF 501
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL 541
I++ G EEK+D S+ N EAE + +L + + S +ITPY AQV + +
Sbjct: 502 INVDG---EEKQDSFKSSYNVEEAEKVLEIVSKLQKYEIPVS---VITPYDAQVKYISKM 555
Query: 542 RSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
+ D ++V +VDGFQGRE E I+IS VR++ ++GFL D RR+NVAVTRARR+
Sbjct: 556 LNTD----KIDVKSVDGFQGRENEVIVISFVRTD---KMGFLKDLRRLNVAVTRARRKLI 608
Query: 602 LVCDTETVSSDGFLKRLIEYFEEH 625
+V + D + + F ++
Sbjct: 609 VVGSKNLLIKDDAYSKFLNCFNDN 632
>gi|332878015|ref|ZP_08445745.1| putative DNA helicase [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|357047737|ref|ZP_09109335.1| putative DNA helicase [Paraprevotella clara YIT 11840]
gi|332683977|gb|EGJ56844.1| putative DNA helicase [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|355529425|gb|EHG98859.1| putative DNA helicase [Paraprevotella clara YIT 11840]
Length = 659
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 182/518 (35%), Positives = 283/518 (54%), Gaps = 53/518 (10%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN-SNLDHSQKD 203
+E TYR M +AL ++S ++G A L + T +F+P L+ +Q+
Sbjct: 147 DETTYRLMFEALDRVS-AARHGRLAELRDIF----HDTAQAGHFSFQPIRFPWLNPTQET 201
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A+++ L +K+V ++HGPPGTGKTTT+VE I + + R S++L CA SN+AVD I E+L
Sbjct: 202 AVNEVLRAKDVMIVHGPPGTGKTTTLVEAIYETLHRESQVLVCAQSNMAVDWISEKLTDR 261
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
V ++R+G+P+R+ ++L + + + IRK ++ L + + + R
Sbjct: 262 GVAVLRVGNPSRVNDKMLSFTYERRFKAHPSYPSLWAIRKAIRDLYAR----RPSSGREA 317
Query: 324 IQKELRTLSKEERKRQQLAVTDVIKN-ADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQAL 382
+++ L ++ ++A+ + + N A V+ TL G+ +R L F + IDEAAQAL
Sbjct: 318 FHQKVARL-RDRATELEIAINESLFNEARVIACTLAGSANRVLAGKKFPTLFIDEAAQAL 376
Query: 383 EIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQ 442
E +CWIA+ K R ILAGDH QLPPTV+ EA K GL RTL E +A + V S+L Q
Sbjct: 377 EASCWIAIQKVGRVILAGDHRQLPPTVKCPEALKGGLDRTLMETIAARHPSAV-SLLRTQ 435
Query: 443 YRMHEHIMNWSSKQLYNSKIKAHPSGVKR-------------TSSTE------------- 476
YRM++ IM +SS+ Y+ K+++ P R T+ E
Sbjct: 436 YRMNDVIMRFSSECFYDGKVESAPEVKYRGILDWDTPMEWIDTADEEQTAPYLTEEPSGA 495
Query: 477 ---PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAM----AHAKRLIQSGVHAS--DIGI 527
P L +++ E + + S N EA + + A+ +++ + + A D GI
Sbjct: 496 VCAPALPAVEVPDFG-ETRNPDSTSRSNPEEARLTLNILKAYFQKIGKERILAERIDTGI 554
Query: 528 ITPYAAQVVLLKILRSKDDKLKN----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFL 583
I+PY QV LL+ L +D K + V+TVDGFQG+E++ I+IS+VRSN ++GFL
Sbjct: 555 ISPYKGQVQLLRALLRRDAFFKPYRHLLSVNTVDGFQGQERDVILISLVRSNENGQIGFL 614
Query: 584 SDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEY 621
D RRMNVA+TRAR + LV ++ T+ F K L Y
Sbjct: 615 HDLRRMNVAITRARMKLILVGNSHTLCRTPFYKLLHGY 652
>gi|380472325|emb|CCF46831.1| DNA helicase [Colletotrichum higginsianum]
Length = 350
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 140/314 (44%), Positives = 199/314 (63%), Gaps = 23/314 (7%)
Query: 174 VLFGEQKPTVLKKDIA-------FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKT 226
VLFG P+ + +D+A + + +L+ SQKDAI AL+S+ V ++HGPPGTGKT
Sbjct: 12 VLFGLSTPSPVPRDLASDSDLSKIQWIDPSLNDSQKDAIRFALASREVALIHGPPGTGKT 71
Query: 227 TTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALD 286
T++E+ILQ +K +IL C SNI+VDNIVERL PH++ ++RLGHPARLLP VL +LD
Sbjct: 72 HTLIELILQLIKLDLRILVCGPSNISVDNIVERLAPHKIPILRLGHPARLLPSVLAHSLD 131
Query: 287 AQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDV 346
+ ++ D+R EM A + KT++ +R+I +L+ L KE R+R++ V+++
Sbjct: 132 VLTQTSEAGAIVKDVRVEMDAKQASIKKTRNGREKRQIYADLKELRKEFRERERRCVSNL 191
Query: 347 IKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLP 406
I+ + VVL TL GA +L + FD+VIIDEA+QALE CW+ LL + + AGDHLQLP
Sbjct: 192 IRESKVVLATLHGAGGHQLRDQQFDVVIIDEASQALEAQCWVPLLSAKKAVCAGDHLQLP 251
Query: 407 PTVQSVEAEKKG----------------LGRTLFERLADLYGDEVTSMLTVQYRMHEHIM 450
PT++S+ + K L TLF+RL L+G + MLT QYRMHE IM
Sbjct: 252 PTIKSLNFKLKAAAVPKEAAGKHIKGMTLETTLFDRLLALHGSSIKRMLTTQYRMHEKIM 311
Query: 451 NWSSKQLYNSKIKA 464
+ S +LY K+ A
Sbjct: 312 RFPSDELYEGKLIA 325
>gi|159905473|ref|YP_001549135.1| putative DNA helicase [Methanococcus maripaludis C6]
gi|159886966|gb|ABX01903.1| DNA helicase [Methanococcus maripaludis C6]
Length = 633
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 199/628 (31%), Positives = 328/628 (52%), Gaps = 91/628 (14%)
Query: 53 GSTILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAH----KFGTHDV----VVLKPNKADL 104
G ILNL GK L EF G+ + + KF D+ VVL L
Sbjct: 41 GRAILNLN---------GKVLREFF---GEYVVRYGRREKFKKTDISVGDVVLISKGNPL 88
Query: 105 GSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQ 164
S LG V + + + V+ + +P+ LN +RL+ N+VT++RM +AL +
Sbjct: 89 QSDLLG--TVIEIGLNHVDVSMEVVPKWALND-IRLDLYVNDVTFKRMLNALDKF----- 140
Query: 165 NGPAAGLIPVLFGEQKPTVLKK-DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGT 223
N LI ++ G P KK +I F + +L+ QK+A+ +AL++++++++HGPPGT
Sbjct: 141 NSADNRLIDIILGVDGPKQSKKTEIRF--LDYSLNEYQKEAVLEALAARDLYLIHGPPGT 198
Query: 224 GKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR-VRLVRLGHPARLLPQVLE 282
GKT T+ E+ILQE R +K++A A SNIAVDNI+ + + ++VR+GHP+R+ ++++
Sbjct: 199 GKTRTISEVILQEALRKNKVIATADSNIAVDNILSNISKYESFKIVRIGHPSRISKKLMK 258
Query: 283 SALDAQVLRGDNSSLASDIRKEMKALNG--KLLKTKDKNTRR-----------EIQKELR 329
+L ++ + ++ +++ K K D RR ++ K++R
Sbjct: 259 YSLQNKITEHPKYNTLKKMKMDLQKNYDLRKSFKRPDPKWRRGMTDDEIIIFSKLNKDIR 318
Query: 330 TLSKEERKR---------------------QQLAVTDVIKNADVVLTTLTGAVSRKLDNT 368
+ KE K+ ++ + D++ +DVV+ T + A S L++
Sbjct: 319 GVPKETIKKMADWVICSENIAKLKENIQKFEKKIIDDIVSTSDVVVATNSMAGSEILEDY 378
Query: 369 SFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
FD+ IDE +Q++E + I ++ + I+AGDH QLPPTV S E E L +TLFER+
Sbjct: 379 RFDVCAIDEGSQSMEPSSLIPIVMSRKLIIAGDHKQLPPTVLSDELE---LKKTLFERMI 435
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSG--------VKRTSSTEPTLL 480
D + +L VQYRM+E IM +S++ Y +K+ AH S VK S + ++
Sbjct: 436 HENSD-FSKILQVQYRMNEKIMEFSNEMFYKNKLIAHGSVKFHNLLDIVKNVSKEDKDIV 494
Query: 481 ---LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVL 537
+ D +EK+D S+ N EA + +L + + S +ITPY AQV
Sbjct: 495 NKKPLQFINVDGQEKQDSFKSSYNVEEAYKVVEIVSKLRKYEIPVS---VITPYDAQVKY 551
Query: 538 LKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
+ + + ++ ++V +VDGFQGRE E I+IS VR++ ++GFL D RR+NVAVTRAR
Sbjct: 552 ISNMLNTNE----IDVKSVDGFQGRENEVIVISFVRTD---KMGFLKDLRRLNVAVTRAR 604
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEH 625
R+ +V + D + + F ++
Sbjct: 605 RKLIVVGSKNLLIKDDAYSKFLNCFNDN 632
>gi|255691334|ref|ZP_05415009.1| DNA helicase [Bacteroides finegoldii DSM 17565]
gi|260622976|gb|EEX45847.1| putative DNA helicase [Bacteroides finegoldii DSM 17565]
Length = 628
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 167/492 (33%), Positives = 270/492 (54%), Gaps = 24/492 (4%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + + N A L L G KP + P+ L+ +Q+ A
Sbjct: 141 DETSYRAMFEALEDVIRAKGNR-LAELRDTLLGTLKPGFRELYPVRFPW---LNSTQETA 196
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R +++ CA SN AVD I E+LV
Sbjct: 197 VNKVLCARDVSIVHGPPGTGKTTTLVEAIYETLHREPQVMVCAQSNTAVDWICEKLVDRG 256
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L + + IRK ++ + G++ + R +
Sbjct: 257 VPVLRIGNPTRVNDKMLSFTYERRFESHPAYPELWGIRKSIREMGGRM-RRGSYEEREGM 315
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
+ + L + + D+ +A V+ +TL + R L+ F + IDEAAQALE
Sbjct: 316 RSRMSRLRDRATELEIQINADLFDSARVIASTLVSSNHRLLNGRRFPTLFIDEAAQALEA 375
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R +LAGDH QLPPT++ +EA + GL TL E++ V S+L VQYR
Sbjct: 376 ACWIAIRKADRVVLAGDHCQLPPTIKCIEAARGGLEYTLMEKVVRQKPSSV-SLLKVQYR 434
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK----------K 493
M+E IM + S Y +++A P R + + ID + + E+ K
Sbjct: 435 MNEAIMQFPSDWFYQGELEAAPEVRYRGILDFDSPMSWIDTSEMEFHEEFVGESFGRINK 494
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNME- 552
E + + E EA + +R+++ + D G+I+PY AQV L+ L+ +
Sbjct: 495 QEANLLLEELEAYINRIGKERILEERI---DFGLISPYKAQVQYLRSKIKGSSFLRPLRS 551
Query: 553 ---VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
V+TVDGFQG+E++ + IS+VR+N + ++GFL+D RRMNVA+TRAR + ++ + T+
Sbjct: 552 LITVNTVDGFQGQERDVVFISLVRANEEGQIGFLNDLRRMNVAITRARMKLVILGEAATL 611
Query: 610 SSDGFLKRLIEY 621
+ F KRL+ +
Sbjct: 612 TKHPFYKRLMAF 623
>gi|302414480|ref|XP_003005072.1| DNA-binding protein SMUBP-2 [Verticillium albo-atrum VaMs.102]
gi|261356141|gb|EEY18569.1| DNA-binding protein SMUBP-2 [Verticillium albo-atrum VaMs.102]
Length = 482
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 169/465 (36%), Positives = 239/465 (51%), Gaps = 51/465 (10%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
S+ F S L+ E A+++ + T AS T Q+ G + +L +TG +TL
Sbjct: 9 SIPLFASTQLALLSNELAADLAQTSTLLASHAPATLQRAGLALTSLLPQARRTGPGARTL 68
Query: 74 LEFQSTKGDV----LPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDI 129
LE LP H D+V++ A Q +
Sbjct: 69 LELAPDPATATTQDLPEHGLRPGDIVLVAEQPA-----GAAQEEGAQGARGQGRQGRRGE 123
Query: 130 PEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIA 189
EGL A+EVTY+RM + +L K + + + VLFG P+ D+A
Sbjct: 124 GAEGL---------ADEVTYKRMNQTMEKLQK-MPEAEYSSFMRVLFGLSSPSPTPVDLA 173
Query: 190 -------FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSK 242
+ + +L+ SQKDAI AL+S+ V ++HGPPG +ILQ V+R +
Sbjct: 174 ADGDFGKLEWVDPSLNDSQKDAIRFALASREVALIHGPPG---------LILQFVRRDQR 224
Query: 243 ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR 302
IL C SNI+VDNIVERL PH++ +VRLGHPARLLP VL +LD ++ D+R
Sbjct: 225 ILVCGPSNISVDNIVERLAPHKIPIVRLGHPARLLPSVLAHSLDVLTHTSSAGAIVQDVR 284
Query: 303 KEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS 362
EM A L K + RR I +L+ L KE R+R++ + ++ + VVL TL GA
Sbjct: 285 AEMDAKQAALKKARTGRDRRAIYADLKDLRKEYRERERGCLRQLVGGSKVVLATLHGAGG 344
Query: 363 RKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEK------ 416
+L + FD+VIIDEA+QALE CW+ LL+ ++ + AGDHLQLPPT++S+ ++
Sbjct: 345 FQLRDEKFDVVIIDEASQALEAQCWVPLLRANKVVCAGDHLQLPPTIKSLNSKTNMAKKQ 404
Query: 417 --------KG--LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN 451
KG L TLF+RL L+G + MLT QYRMHE IM
Sbjct: 405 DEEEVPTVKGMTLETTLFDRLLSLHGPSIKRMLTTQYRMHEAIMQ 449
>gi|126632173|gb|AAI33682.1| Ighmbp2 protein [Mus musculus]
Length = 378
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 220/353 (62%), Gaps = 11/353 (3%)
Query: 14 SLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTL 73
+++ FV+ L++LE++AE+ + +L Q +G +L L+ +TGL G+ L
Sbjct: 5 TVESFVAQQLQLLELERDAEVEERRSWQEHSSLRELQSRGVCLLKLQVSSQRTGLYGQRL 64
Query: 74 LEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIP 130
+ F+ K VLP++ F + D+V L + L GV+ R+ S+TVAFD+
Sbjct: 65 VTFEPRKFGPAVVLPSNSFTSGDIVGLYDTNEN---SQLATGVLTRITQKSVTVAFDESH 121
Query: 131 EEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKK 186
+ LN + RL KLAN+VTY+R+K AL+ L K +GPA+ LI +L G P+ +
Sbjct: 122 DLQLNLDRENTYRLLKLANDVTYKRLKKALMTLKK-YHSGPASSLIDILLGSSTPSPAME 180
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILAC 246
+N+ LD SQK+A+S AL+ K + ++HGPPGTGKTTTVVEIILQ VK+G K+L C
Sbjct: 181 IPPLSFYNTTLDLSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCC 240
Query: 247 AASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
A SNIAVDN+VERL + R++RLGHPARLL V +LDA + R DN+ + +DIR+++
Sbjct: 241 APSNIAVDNLVERLALCKKRILRLGHPARLLESVQHHSLDAVLARSDNAQIVADIRRDID 300
Query: 307 ALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
+ GK KT+DK + + E++ L KE ++R++ A+ + ADVVL T TG
Sbjct: 301 QVFGKNKKTQDKREKGNFRSEIKLLRKELKEREEAAIVQSLTAADVVLATNTG 353
>gi|423302630|ref|ZP_17280652.1| hypothetical protein HMPREF1057_03793 [Bacteroides finegoldii
CL09T03C10]
gi|408470506|gb|EKJ89040.1| hypothetical protein HMPREF1057_03793 [Bacteroides finegoldii
CL09T03C10]
Length = 628
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 166/492 (33%), Positives = 269/492 (54%), Gaps = 24/492 (4%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + + N A L L G KP + P+ L+ +Q+ A
Sbjct: 141 DETSYRAMFEALEDVIRAKGNR-LAELRDTLLGTLKPGFRELYPVRFPW---LNSTQETA 196
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R +++ C SN AVD I E+LV
Sbjct: 197 VNKVLCARDVSIVHGPPGTGKTTTLVEAIYETLHREPQVMVCTQSNTAVDWICEKLVDRG 256
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L + + IRK ++ + G++ + R +
Sbjct: 257 VPVLRIGNPTRVNDKMLSFTYERRFESHPAYPELWGIRKSIREMGGRM-RRGSYEEREGM 315
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
+ + L + + D+ +A V+ +TL + R L+ F + IDEAAQALE
Sbjct: 316 RSRMSRLRDRATELEIQINADLFDSARVIASTLVSSNHRLLNGRRFPTLFIDEAAQALEA 375
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R +LAGDH QLPPT++ +EA + GL TL E++ V S+L VQYR
Sbjct: 376 ACWIAIRKTDRVVLAGDHCQLPPTIKCIEAARGGLEYTLMEKVVRQKPSSV-SLLKVQYR 434
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEEK----------K 493
M+E IM + S Y +++A P R + + ID + + E+ K
Sbjct: 435 MNEAIMQFPSDWFYQGELEAAPEVRYRGILDFDSPMSWIDTSEMEFHEEFIGESFGRINK 494
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNME- 552
E + + E EA + +R+++ + D G+I+PY AQV L+ L+ +
Sbjct: 495 QEANLLLEELEAYINRIGKERILEERI---DFGLISPYKAQVQYLRSKIKGSSFLRPLRS 551
Query: 553 ---VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
V+TVDGFQG+E++ + IS+VR+N + ++GFL+D RRMNVA+TRAR + ++ + T+
Sbjct: 552 LITVNTVDGFQGQERDVVFISLVRANEEGQIGFLNDLRRMNVAITRARMKLVILGEAATL 611
Query: 610 SSDGFLKRLIEY 621
+ F KRL+ +
Sbjct: 612 TKHPFYKRLMAF 623
>gi|402220987|gb|EJU01057.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 766
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 173/446 (38%), Positives = 240/446 (53%), Gaps = 54/446 (12%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
L F++ L+ E+ A+I + + + +++G + L + GL GK+L+
Sbjct: 12 LSAFLTRQRELLAAERAADIERTSLLFSKCSPKLLEQRGLALGGLGVAGVELGLGGKSLV 71
Query: 75 EFQ-----STKGDVLPAHKFGTHDV------VVLKPNKADLGSPALG----------QGV 113
E + T H F D+ VV K G A +GV
Sbjct: 72 ELERPTAYHTSPIFFSPHTFRPGDLARIDQHVVSSARKPIKGKKATNGETGETGKAVEGV 131
Query: 114 VYRLKDSSITVAFD-----------DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKG 162
VYR+ D+ I +A D D+PE R+ KLAN VTY RM A+ L +
Sbjct: 132 VYRVSDTKIVIAIDGDRGAQESEDLDLPER-----CRVLKLANTVTYDRMDKAIDALERL 186
Query: 163 VQNGPAAG-------LIPVLFG--EQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKN 213
V PA+G L+ +L G P V D+ F + +L+ SQK+A+ AL +
Sbjct: 187 VL--PASGSSPAVSRLVEILLGIYPPSPPVPVTDLQF--MDPSLNLSQKNAVRAALQAPE 242
Query: 214 VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHP 273
V ++HGPPGTGKT T+VEII Q V + K+L C ASN+AVDN++ERLVPH + + RLGHP
Sbjct: 243 VALIHGPPGTGKTHTLVEIIRQLVAKEQKVLVCGASNLAVDNLLERLVPHGIPVTRLGHP 302
Query: 274 ARLLPQVLESALDAQVLRGDNSSLASDIRKE----MKALNGKLLKTKDKNTRREIQKELR 329
AR+L + S LDAQ D S LA D++ + M AL GK R+++ E++
Sbjct: 303 ARVLQSLQSSTLDAQTAASDESQLAKDVKADIDSAMSALAGKGKARIRGAERKKMWDEVK 362
Query: 330 TLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIA 389
L KE RKR+ AV V+ A VVL+T GA SR+L N+ FD+VIIDEA QA+E CWI
Sbjct: 363 GLRKEWRKREGGAVKAVMGRAKVVLSTCHGAGSRQLQNSQFDVVIIDEATQAMEAVCWIP 422
Query: 390 LLKGSRCILAGDHLQLPPTVQSVEAE 415
+LK + ILAGD LQLPPTV S+++E
Sbjct: 423 ILKAKKLILAGDPLQLPPTVLSLDSE 448
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 134/235 (57%), Gaps = 26/235 (11%)
Query: 422 TLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR---------- 471
TLF+R+ ++ V MLTVQYRMH I + S LY SK+K+H S
Sbjct: 533 TLFDRVERMF-PRVKKMLTVQYRMHAIICQFPSTTLYRSKLKSHESVAAHLLRDLPTVSK 591
Query: 472 ----TSSTEPTLLLIDIAGCDMEEKKD--------EEDSTMNEGEAEVAMAHAKRLIQSG 519
+ P ++ D AGC+ E+ + +E S NE E ++L+ +G
Sbjct: 592 DDEFSDVVTPPVVFFDTAGCEFFERTEADGLSGGLDEGSKSNENEGAAVQRWVQKLVMAG 651
Query: 520 VHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKE 579
V I +ITPY AQV L L D + ++E+ TVDG QGREKEA+++S+VRSN K+E
Sbjct: 652 VAPGQIAVITPYQAQVTYLTSLLRAD--MPDLEIGTVDGMQGREKEAVVLSLVRSNDKRE 709
Query: 580 VGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAEYLSGSE 633
VGFL ++RR+NVA+TR RR C+V D+ETVS G +LK + + E++A+ G +
Sbjct: 710 VGFLREKRRLNVAMTRPRRHLCVVGDSETVSQGGTYLKNWMAWLEQNADVRYGGD 764
>gi|313227208|emb|CBY22355.1| unnamed protein product [Oikopleura dioica]
Length = 542
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 184/529 (34%), Positives = 280/529 (52%), Gaps = 73/529 (13%)
Query: 111 QGVVYRLKDSSITVAFDDIPEEG----LNSPLRLEKLANEVTYRRMKDALIQLSKGVQNG 166
+G V+ +++I V D + E G L L + +++TYRRMK A ++ K ++
Sbjct: 34 RGFVFSTSEATIDVCVD-VGENGEKIALGDRLDIMPAPDDITYRRMKAASEEMKKMIETR 92
Query: 167 PAAGLIPVLFGEQKP---TVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGT 223
++ + ++FGE +P + +A K NL+ Q +A+ +L+ +++ LHGPPGT
Sbjct: 93 -SSRTVDIIFGESQPYPQVSTESFLAPKTDVKNLNKEQLEAVRASLAIQDLMCLHGPPGT 151
Query: 224 GKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR-VRLVRLGHPARLLPQVLE 282
GK+TTV I+ + +RG K + SN AVD +VE+L R V + RLGHPAR P + +
Sbjct: 152 GKSTTVAAIVAEAAQRGIKTIVTCPSNAAVDALVEKLAKRREVVVTRLGHPARTSPHLRQ 211
Query: 283 SAL-----DAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERK 337
L D ++LRG ++ +M A +G+ R E++KEL R
Sbjct: 212 YTLEAKMADVEMLRG--------LKSDMYAASGR--------ERGELRKEL-------RD 248
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVSRKL-----DNTSFDLVIIDEAAQALEIACWIALLK 392
R++ T+++ N+ V+ T T + + D F L I+DEA QA+E A + L +
Sbjct: 249 REKKCSTEILANSHAVVATCTVVGMKSILDVISDPEHFGLAIVDEAGQAVEPAIYPILRR 308
Query: 393 GS-RCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN 451
S + ILAGD QLPPTV S A L +TL E L + T +L QYRM++ I +
Sbjct: 309 CSKKLILAGDPAQLPPTVMSKGASI--LTKTLLEDLMGRFPSN-TVLLKRQYRMNKMISD 365
Query: 452 WSSKQLYNSKIKAHPS--------------GVKRTSSTE-------PTLLLIDIAGCDME 490
W S +Y ++ A S GV + + + + LID G +M+
Sbjct: 366 WVSDSMYRGELIADESVQNHTLGDLLQDVEGVAKLAGADFVKDILSSPMTLIDTVGSNMD 425
Query: 491 EKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN 550
E + ED + GEA +A K LI++G+ +I II+PYAAQV L+ L
Sbjct: 426 EDQVSEDQSKVLGEAILAALTTKILIKAGIKPKNIAIISPYAAQVQLIAKLVG-----PA 480
Query: 551 MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 599
+ V TVDG+QG E E +I+S+VRSN GFLSDRRR+NVAV+RAR++
Sbjct: 481 VSVRTVDGYQGGEAEVVILSLVRSNIDGTTGFLSDRRRLNVAVSRARKK 529
>gi|402086547|gb|EJT81445.1| DNA helicase, variant [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 627
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 145/360 (40%), Positives = 201/360 (55%), Gaps = 45/360 (12%)
Query: 221 PGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR-VRLVRLGHPARLLPQ 279
P TGKT T++E+ILQ +K+G +IL CA SN+AVDN+ ERL PH +VR+GHPARLLP
Sbjct: 19 PSTGKTHTLIELILQFLKQGLRILVCAPSNVAVDNVAERLAPHSGAPIVRIGHPARLLPS 78
Query: 280 VLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQ 339
V +LD + ++ D+R EM A G + KTK RR I +L+ L KE R+R+
Sbjct: 79 VAAHSLDVLTQTSEAGAIVRDVRAEMDAKQGSIKKTKSARERRLIYADLKELRKEFRERE 138
Query: 340 QLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILA 399
+ VTD+++++ VVL TL GA +L FD+VIIDEA+QALE CW+AL + + A
Sbjct: 139 RRCVTDLVRSSKVVLATLHGAGGFQLRQEKFDVVIIDEASQALEAQCWVALFAAKKAVCA 198
Query: 400 GDHLQLPPTVQSVEAEKKG------------------LGRTLFERLADLYGDEVTSMLTV 441
GDHLQLPPT++S+ ++ L TLF+RL L+G + MLT
Sbjct: 199 GDHLQLPPTIKSLNSKTPTAAGGAAPAAAKGKGRGATLETTLFDRLLKLHGASIKRMLTT 258
Query: 442 QYRMHEHIMNWSSKQLYNSKIKAH-----------PSGVKRTSSTEPTLLLIDIAGCDME 490
QYRMHE IM + S +LY S++ A P V+ T T L+ ID G +
Sbjct: 259 QYRMHEKIMRFPSDELYGSELTAAEAVKGRLLRDLPYAVEDTDETREPLIFIDTQGGNFS 318
Query: 491 EKKDEE---------------DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQV 535
E+ D+ +S NE EA + + L+ +GV DI ++TPY QV
Sbjct: 319 ERSDDTEAGDAAGKKKIALHGESKSNEREAALVSQQVRLLVDAGVKPEDIAVVTPYNGQV 378
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Query: 546 DKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCD 605
+ +E+ +VDGFQGREKEA+I+S+VRSNS+ EVGFL ++RR+NVA+TR +R ++ D
Sbjct: 539 EAFPGIELGSVDGFQGREKEAVIVSLVRSNSEGEVGFLGEKRRLNVAMTRPKRSLTIIGD 598
Query: 606 TETVS-SDGFLKRLIEYFEEHAE 627
++TV FLKR +E+ EEHA+
Sbjct: 599 SDTVKRGSAFLKRWMEHLEEHAD 621
>gi|308810613|ref|XP_003082615.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
gi|116061084|emb|CAL56472.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
Length = 545
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 262/477 (54%), Gaps = 60/477 (12%)
Query: 189 AFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII-----LQEVKR---- 239
A K L+ SQ+ A+ A SS ++ + GPPGTGKT T++ I L ++R
Sbjct: 78 AIKLVRDPLNSSQRVAVKSATSS-SLAVWQGPPGTGKTRTLIAYIGAAVHLASIQRRRGK 136
Query: 240 GSKILACAASNIAVDNIVERLVPHR-------VRLVRLGHPARLLPQVLESALDAQVLRG 292
G +LA AASN+AVDNI+E L + +R+VRLG PA++ P + E LDAQ+ +
Sbjct: 137 GPVVLASAASNVAVDNILEGLAKEKFVIDGRPLRVVRLGAPAKVQPWLQELTLDAQIAQH 196
Query: 293 DNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKN 349
A+ +R ++ L+G +++ ++ QL +T ++K+
Sbjct: 197 PLGRQAAAMRDAIRGLSGP------------------AYARQRKQATQLELTAAKSILKS 238
Query: 350 ADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTV 409
DVV +T GA L++ +F + ++DEA Q E A IAL K +L GD QLPPTV
Sbjct: 239 VDVVCSTCVGAGDDLLEDLTFPVTVLDEATQCTEPAALIALSKALSAVLVGDSRQLPPTV 298
Query: 410 QSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGV 469
S +A GL ++FER+ L G +V S+L +QYRMH I + S+ Y+ K+ + P+
Sbjct: 299 VSRDAVDAGLQISIFERMERL-GVKV-SLLDLQYRMHPLIAEFPSQAFYSGKVGSAPTPQ 356
Query: 470 KR-----TSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG--VHA 522
R + +P + ++ + D E + + +S N EA+ A+ K+++ SG
Sbjct: 357 DRPIVPGVAWPKPNVPVVFLEINDAECRAPDGNSLYNVEEAKTAITVVKKILASGDLAGP 416
Query: 523 SDIGIITPYAAQVVLLK-------------ILRSKDDKLKNMEVSTVDGFQGREKEAIII 569
DIG+I+PYAAQV LL+ + + +DK+K +E+ +VDGFQGREKE I++
Sbjct: 417 GDIGVISPYAAQVRLLQEEYGVLGTAKRNYLDYTDEDKMKELEIRSVDGFQGREKEVIVL 476
Query: 570 SMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHA 626
VRSN+ +GF+ D RR+NV +TRARR ++ + T+S++ ++ ++ +++
Sbjct: 477 CTVRSNTGGGIGFVDDPRRLNVGITRARRGLIVLGNRRTLSTNEIWRKWFKWIDQYG 533
>gi|145353588|ref|XP_001421091.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581327|gb|ABO99384.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 466
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 256/477 (53%), Gaps = 60/477 (12%)
Query: 188 IAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK--------- 238
+A K L+ SQ+ A+ ALSS ++ + GPPGTGKT T++ I V
Sbjct: 1 MALKEVREPLNPSQRVAVKSALSS-SLAVWQGPPGTGKTRTLIAYIGAAVHLASIQKRRG 59
Query: 239 RGSKILACAASNIAVDNIVERLVPHR-------VRLVRLGHPARLLPQVLESALDAQVLR 291
RG +LA AASN+AVDNI+E L +R+VR+G PA++ P + + LDAQ+
Sbjct: 60 RGPIVLASAASNVAVDNILEGLAKESFIVDGRPLRVVRVGAPAKVQPWLQQLTLDAQIAL 119
Query: 292 GDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNAD 351
A+ +R+ ++ +G + K Q EL A ++K+ D
Sbjct: 120 HPLGRQAAAMREAIRGQSGPAFARQRKQA---TQLEL------------TAAKSILKSVD 164
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
VV TT GA L++ +F + ++DEA Q E I+L K +L GD QLPPTV S
Sbjct: 165 VVCTTCVGAGDELLEDFTFPVAVVDEATQCTEPGALISLTKALSAVLVGDSKQLPPTVVS 224
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS---- 467
+A GL ++FER+ L G +V S+L +QYRMH I + S Y K+ + P+
Sbjct: 225 RDAVDAGLQVSIFERMERL-GVKV-SLLDMQYRMHPQIAEFPSLAFYKGKVGSVPTPQDR 282
Query: 468 ----GVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG--VH 521
G+ S P + ++I+ E + + +S N GEA++A+ ++L+ +G
Sbjct: 283 PLVPGIAWPSPNVP-VAFVEISAP--ESRAPDGNSLYNVGEAKMAIGVVRKLLAAGDLAG 339
Query: 522 ASDIGIITPYAAQVVLLK-------------ILRSKDDKLKNMEVSTVDGFQGREKEAII 568
DIG+I+PYAAQV L+ + +++DK++ +E+ +VDGFQGREKE I+
Sbjct: 340 PGDIGVISPYAAQVRRLQEEYGVGGSPKRNYLDYTEEDKIEELEIRSVDGFQGREKEVIV 399
Query: 569 ISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEH 625
+ VRSN ++GF++D RR+NV +TRA+R ++ + +T+S++ + ++ +E
Sbjct: 400 LCTVRSNPSGDIGFVADPRRLNVGITRAKRGLIVLGNRKTLSNNEMWRSWFKWIDEQ 456
>gi|412987528|emb|CCO20363.1| predicted protein [Bathycoccus prasinos]
Length = 985
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 171/508 (33%), Positives = 266/508 (52%), Gaps = 78/508 (15%)
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII------------- 233
D A + NL+ SQ+ A+ A+ + + + GPPGTGKT T+V +I
Sbjct: 498 DQAMSSYAKNLNPSQRKAVKAAMQN-TLTLWRGPPGTGKTRTLVALIASVVNYANVQENG 556
Query: 234 ----------LQEVKRGSKILACAASNIAVDNIVERLVPHRV----RLVRLGHPARLLPQ 279
Q RG K+LACAASN+AVDNI++ L+ ++ ++RLG PAR+ P
Sbjct: 557 GKSDRGKSSNTQASWRGPKVLACAASNVAVDNILDALLREKIDRSMNILRLGSPARVQPW 616
Query: 280 VLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQ 339
+LES L +V A+ IR+ + + L K + +++ +E
Sbjct: 617 LLESTLSHKVALHPKGKEANSIRERFRGITS-LEAAKARKQAQQLDRE------------ 663
Query: 340 QLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILA 399
A V+ +DV+L T GA L + F +DEAAQ +E I L K +L
Sbjct: 664 --AAIQVVNASDVILATCVGAGDDLLADRVFRYAFVDEAAQCVEPHTLIPLTKALAGVLV 721
Query: 400 GDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYN 459
GD QLPPTV S +A GL R+L ERL +L G E +L QYRMH + +SS + Y+
Sbjct: 722 GDTKQLPPTVVSRDAVAIGLQRSLIERL-ELLGVE-PYLLEEQYRMHPGLAAFSSVRFYD 779
Query: 460 SKIKA--------HPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAH 511
++K+ P+GV S+ P L +++ G +M + + +S N EAE +
Sbjct: 780 RRLKSVPKPSERVAPNGVNWPSTMVP-LAFVEVKGEEM--RAPDGNSIFNVQEAEECVRV 836
Query: 512 AKRLIQSG--VHASDIGIITPYAAQVVLLKILRSK----DDKLKN--------------- 550
++L+ SG +A DIGII PYAAQV + ++ D KLKN
Sbjct: 837 VQKLLLSGDVKNAGDIGIIAPYAAQVRAISEEWNRKVTSDVKLKNTSVVEADNPESAKDE 896
Query: 551 MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS 610
+E+ +VDGFQGREKE I++ VR+N + ++GF++D RR+NVA+TRA+R ++ +T+S
Sbjct: 897 LEIRSVDGFQGREKEVIVLCTVRNNRQNQLGFVADPRRLNVAITRAKRGLIVLGHRDTLS 956
Query: 611 SDGFLKRLIEYFEEH-AEYLSGSEYLNE 637
+D ++ +++ +++ E S +L+E
Sbjct: 957 TDQLWQKWLQFVDKYECEVESADVFLDE 984
>gi|115448159|ref|NP_001047859.1| Os02g0704300 [Oryza sativa Japonica Group]
gi|113537390|dbj|BAF09773.1| Os02g0704300 [Oryza sativa Japonica Group]
Length = 331
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 128/304 (42%), Positives = 180/304 (59%), Gaps = 19/304 (6%)
Query: 343 VTDVIKNADVVLTTLTGAVSRKLDNTS-FDLVIIDEAAQALEIACWIALLKGSRCILAGD 401
+ + + A VVL+T TGA + T FDLVIIDEA QA+E +CWI +L+G RCILAGD
Sbjct: 2 IREALSEAQVVLSTNTGAADPLIRRTCCFDLVIIDEAGQAIEPSCWIPILQGKRCILAGD 61
Query: 402 HLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSK 461
H QL P + S +A GLG++L ER + L+ +T+ LTVQ+RM++ I +W+SK++Y+
Sbjct: 62 HCQLAPVILSRKALDGGLGKSLLERASSLHNGLLTTRLTVQHRMNDSIASWASKEMYHGL 121
Query: 462 IKAHPSGVKRTSSTEPT----------LLLIDI--------AGCDMEEKKDEEDSTMNEG 503
+K+ S +T + P LLL+D GC + S N+G
Sbjct: 122 LKSSHSVASQTLADSPVVKATWITRCPLLLLDTRMPYGALDTGCGEQIDLSGTGSFYNDG 181
Query: 504 EAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGRE 563
EA++ H L+ GV + I + +PY AQV LL+ + L +EVST+D FQGRE
Sbjct: 182 EADIVTQHVLNLVHCGVSPTAIAVQSPYIAQVQLLRERLEEYPGLSGVEVSTIDSFQGRE 241
Query: 564 KEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFE 623
+A++ISMVRSN VGFL D RRMNVA+TRA R +VCDT T+ FL RL+ +
Sbjct: 242 ADAVVISMVRSNPLGAVGFLGDSRRMNVAITRACRHVTVVCDTSTICHSTFLARLLRHIR 301
Query: 624 EHAE 627
+ +
Sbjct: 302 RYGQ 305
>gi|156375043|ref|XP_001629892.1| predicted protein [Nematostella vectensis]
gi|156216902|gb|EDO37829.1| predicted protein [Nematostella vectensis]
Length = 405
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 236/391 (60%), Gaps = 27/391 (6%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
+++F L+ +E++AE+ + + + QK+G +L L + TGL G++LL
Sbjct: 4 VEKFAKKTLALLSIERKAEVDEARAFQTNISPAELQKRGVCVLKLSIRNRCTGLYGRSLL 63
Query: 75 EFQSTK--GD-VLPAH--KFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDD- 128
F+ + GD LP+H K D+V + + + L G+V R+ D+ ITVAFDD
Sbjct: 64 TFERLRPGGDNKLPSHPYKLFPGDIVGVSASGKSAIAEELCSGIVTRVTDNGITVAFDDA 123
Query: 129 -----IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
I ++GL RL KLAN+VTY+R+K A+ +L+K ++G A+ LI VLFG
Sbjct: 124 VDTDEIDDDGL---YRLSKLANDVTYKRIKCAMGELTK-YRSGRASHLIDVLFGRVSMGC 179
Query: 184 LKKDIAF------KPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV 237
+ I F + FN++LD SQ++A+ AL V ++HGPPGTGKTTTVVEIILQ
Sbjct: 180 PLQSIYFGNEDEMELFNTSLDLSQREAVGFALRQPEVAVIHGPPGTGKTTTVVEIILQAT 239
Query: 238 KR-GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSS 296
K+ G K+LACA SNIAVDN+VE+L + ++VRLGHPARLL + + +LDA + +++
Sbjct: 240 KKCGMKVLACAPSNIAVDNLVEKLARSKAKVVRLGHPARLLKDIQQHSLDAILSSSSSTA 299
Query: 297 LASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTT 356
+ D+R+++ K K+K RR++++E++ L KE R R++ A+ +++ +VVL T
Sbjct: 300 IVQDVRRDIDLTMKKSCKSKPAE-RRQLRQEIKVLRKELRDREEKAMREILTGVEVVLAT 358
Query: 357 LTGAVSRK----LDNTSFDLVIIDEAAQALE 383
T A L FDLV+IDEAAQALE
Sbjct: 359 NTSAGDTGPLGLLKEDHFDLVVIDEAAQALE 389
>gi|343415926|emb|CCD20512.1| hypothetical protein, conserved (fragment) [Trypanosoma vivax Y486]
Length = 794
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 171/465 (36%), Positives = 253/465 (54%), Gaps = 45/465 (9%)
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVF-MLHGPPGTGKTTTVVEIILQEV-KRGSKIL 244
D FK L+ SQ+ A+ ALS N F ++ GPPGTGKT+T V+II Q + ++ +++L
Sbjct: 340 DEGFK----GLNESQQAAVKAALS--NAFTLIQGPPGTGKTSTSVQIIRQLLLRKKTRVL 393
Query: 245 ACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKE 304
CA SN AVD++ E + +++ +R+ P+ E D+ G +L S +R+
Sbjct: 394 VCAPSNAAVDHLSESMYKNKIDFIRV------QPRYREEN-DS----GRPYTLGSRVREI 442
Query: 305 MKALNGKLLKTKDKNTRREIQKELRTLSKEER----KRQQLAVTDVIKNADVVLTTLTGA 360
M+A+ L + K +R + E LS+EE+ K + AV ++ VV T GA
Sbjct: 443 MEAM--PLNRKKRDIVKRAL--ESGRLSEEEKQLCQKLEDRAVKKILAETRVVACTCIGA 498
Query: 361 VSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCI-LAGDHLQLPPTVQSVEAEKKGL 419
SR L D V+IDEA+QA E + L +G + + L GDH QL P V S A KKG
Sbjct: 499 GSRWLRGFKADFVLIDEASQATEPETLVPLFRGEKQVALVGDHRQLGPVVLSNVAGKKGF 558
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKI-------KAHPSGVKRT 472
R+LFERLA G E+T L +QYR H I +SS Y + K SG+
Sbjct: 559 ARSLFERLAGA-GSEIT-QLNLQYRTHPFIYRFSSMAFYGGTVLDGVPAEKRDASGIFPW 616
Query: 473 SSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG-VHASDIGIITPY 531
+ E +L D +G +EE D S +NE EA ++ +++SG V ++GII+PY
Sbjct: 617 PNPEKPMLFYDCSG--VEEVGDSGASFLNEAEARATISVVDAVLESGAVRPDEVGIISPY 674
Query: 532 AAQV-----VLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR 586
AQ LL+ + D + +E+STVD +QGREKE II+S VR+N ++ VGF+ D
Sbjct: 675 RAQCEYMRERLLQWGTAGKDIYEKVEISTVDAYQGREKEIIILSCVRNNEERTVGFIGDE 734
Query: 587 RRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
RR+NV++TRARR + E + D +L+ Y EH+ ++G
Sbjct: 735 RRLNVSLTRARRGLIAIGKAEALRGDKCWSKLLLYMGEHSLAVTG 779
>gi|390605116|gb|EIN14507.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 778
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 163/469 (34%), Positives = 245/469 (52%), Gaps = 68/469 (14%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
L F++ L+ E++ E++ S ++ + + KG I L GL GKTL+
Sbjct: 9 LVAFIARQRELLARERQEEVNRSSLLLSNCSQKQLEHKGLAIGGLGVASLNIGLGGKTLV 68
Query: 75 EFQSTKG----DVLPAHKFGTHDVVVLKPNKADLGS---------PALG--------QGV 113
E + +LP H D+ ++ N G+ P+ +GV
Sbjct: 69 ELERPTAYNASPLLPPHTLRPGDLARVEENVTGAGTASKFAKGRKPSTAPDKECKSTEGV 128
Query: 114 VYRLKDSSITVAFD----DIPEEGLNSPLRLEKLANEVTYRRMKDALIQL---------S 160
VY++ DS I +A D D+PE R+ KLAN +TY RM A+ Q+
Sbjct: 129 VYQVSDSRIVIASDAEDVDLPER-----CRIVKLANSITYDRMDKAIDQMERVVLPSHGD 183
Query: 161 KGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGP 220
KG + P L+ +L G P+ L+ FN L+ +Q++A+ L S V +HGP
Sbjct: 184 KGYPSPPPNRLVQILLGLASPSPLRPIDHLTFFNEGLNSTQREAVKFVLQSPEVACIHGP 243
Query: 221 PGTGKTTTVVEIILQEVK------RGSKILACAASNIAVDNIVERLVP---------HRV 265
PGTGKT T++EII Q R ++L C ASN++VDNI+ERL+ ++
Sbjct: 244 PGTGKTHTLIEIIRQLTSITAWNPRPQRLLVCGASNLSVDNILERLLALPPPSDPKQGKI 303
Query: 266 RLVRLGHPARLLPQ--VLESALDAQVLRGDNSSLASDIRKEMKA----LNGKLLKTKDKN 319
++ R+GHPAR++ + VLE+ L+ Q R D ++LA D++ E++A LNGK K K
Sbjct: 304 KVTRVGHPARVMAKEGVLEATLEVQAGRSDQAALAKDVKNELEATLDSLNGKGKGAKAKR 363
Query: 320 TR----REIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVII 375
R +++ ++R L KE RKR+ V V+K ++VVL T + R+L N FD+VII
Sbjct: 364 PRGLERKKMWDDVRALRKEYRKREGGVVESVLKASEVVLATCFTSGGRQLFNQDFDVVII 423
Query: 376 DEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVE----AEKKGLG 420
DEA QA+E CWI + K + ILAGD +QLPPTV S++ AE KG+
Sbjct: 424 DEATQAMEAVCWIPVFKAEKLILAGDPMQLPPTVLSLDEGMFAETKGIA 472
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 137/232 (59%), Gaps = 23/232 (9%)
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT---- 472
K L TLF+RL +YG + ML +QYRMH HI + SK LY++K+ HP+
Sbjct: 543 KSLEVTLFDRLEKMYGSNIKRMLRIQYRMHAHINAFPSKTLYSNKLIPHPTVANHLLRDL 602
Query: 473 ------------SSTEPTLLLIDIAGCDMEEKKD---EEDSTMNEGEAEVAMAHAKRLIQ 517
+ E ++ D AGC+ E+ D +E S NE EA V + L+
Sbjct: 603 PNIATSENDLDLDALETPVVFFDTAGCEYHERTDGDGDEGSKCNENEASVVKHWVETLVG 662
Query: 518 SGVHASDIGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNS 576
+G+ I I+TPY AQV LL +LR ++E+ ++DG QGREKEA+II++VRSNS
Sbjct: 663 AGILPDQIAIVTPYQAQVQLLTSVLRPTFGS--DLEIGSIDGMQGREKEAVIITLVRSNS 720
Query: 577 KKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS-SDGFLKRLIEYFEEHAE 627
K+EVGFL ++RR+NVA+TRA+R C+V D+ TV FLK + + EE+A+
Sbjct: 721 KREVGFLKEKRRLNVAMTRAKRHLCVVGDSSTVQHGSSFLKAWMSWLEENAD 772
>gi|443895307|dbj|GAC72653.1| DNA helicase [Pseudozyma antarctica T-34]
Length = 838
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 166/460 (36%), Positives = 234/460 (50%), Gaps = 98/460 (21%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEFQSTKG----DVLPAHKFGTHDVVVLKPNKADLG 105
+K G +L+L + G+ K L+E + P H F + D+ + N A+
Sbjct: 51 EKHGLALLSLGVASIRIGVGAKLLVELERPSAYHSSPNFPPHSFRSGDLAAVLENSAEPQ 110
Query: 106 S---PALGQGVVYRLKDSSITVAFDDI---------PEEGLNS----------------- 136
+ + +GVVYR+ + IT+A + PE G N
Sbjct: 111 ATTDSCVVEGVVYRVTEMRITLAVSERQRTPKPKPEPEGGQNKRDARTGDKNKVSGSEFD 170
Query: 137 -P--LRLEKLANEVTYRRMKDALIQLSK--GVQNGPAAG--------------------- 170
P +RL K+ANE T+ RM+ L +L++ GV GPA+
Sbjct: 171 LPERIRLVKVANETTFDRMEVTLDKLARALGVSLGPASSGADGDSSADEADTVEAGPSSN 230
Query: 171 ---LIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTT 227
L LFG PT ++D+ PFN++L+ +Q AI ALSS +V ++HGPPGTGKTT
Sbjct: 231 ATTLQRALFGLAPPTWHQQDVPLPPFNASLNETQLAAIRHALSSDHVSLIHGPPGTGKTT 290
Query: 228 TVVEIILQEVKRG---------SKILACAASNIAVDNIVERLV---PHR-------VRLV 268
+VE+I+Q V ++L C ASN+AVDNI+ERLV HR V +
Sbjct: 291 AIVELIMQIVASNLGASEDAGRVRVLVCGASNLAVDNILERLVASAAHREVFKKKGVGVT 350
Query: 269 RLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKAL-----------NGKLLKTKD 317
RLGHPAR++ + + LDAQ + + L DI KE++ + K K K
Sbjct: 351 RLGHPARVVASLQGATLDAQCTQSAEAQLVKDISKEIETIMAALKPTAAAAGNKSAKAKP 410
Query: 318 K---NTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVI 374
K + RR+ +E+R L KE R+R + + V+ A +VL T GA R+L N FD VI
Sbjct: 411 KLRGSDRRKRWEEVRELRKEYRRRDRQVTSSVLDRAQIVLATCHGAGGRQLANRQFDWVI 470
Query: 375 IDEAAQALEIACWIALLK---GSRCILAGDHLQLPPTVQS 411
IDEA QALE+ACWI +LK G+R +LAGDHLQLPPTV+S
Sbjct: 471 IDEACQALEMACWIPILKAREGARLVLAGDHLQLPPTVKS 510
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 137/241 (56%), Gaps = 31/241 (12%)
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS-- 474
+ L TLF RL LYG + S+L++QYRM+ IM++ + +LY K+ AH S T S
Sbjct: 589 RSLETTLFSRLLGLYGSGLKSLLSIQYRMNTAIMSFPNAELYEGKLSAHESCASITLSDL 648
Query: 475 ------TEP-------TLLLIDIAGCDMEEKK---DE----EDSTMNEGEAEVAMAHAKR 514
T P ++L D +GC++ E DE DS N EAE+ + H +
Sbjct: 649 SNVQTETGPDDDDLLAPVVLYDTSGCELYESSPTADEGVLLADSKSNVHEAELVVRHLEE 708
Query: 515 LIQSGVHASDIGIITPYAAQVVLLKI-LRSKDDKLKN---MEVSTVDGFQGREKEAIIIS 570
L GV A + ++TPYAAQV LL +RS N +E+ T+D QGREK+ +++S
Sbjct: 709 LFARGVGAGQVTVLTPYAAQVALLHARIRSHSFTGINADEIELGTIDSMQGREKDVVVVS 768
Query: 571 MVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS-----SDGFLKRLIEYFEEH 625
+VRSN ++VGFL+ ++R+NVA+TRA+RQ L+ D E ++ + FL + + +EH
Sbjct: 769 LVRSNIDRQVGFLAQKKRLNVAITRAKRQLVLIADAECIAEATDLPNEFLPHYMAWLDEH 828
Query: 626 A 626
A
Sbjct: 829 A 829
>gi|327404581|ref|YP_004345419.1| DEAD-like helicase [Fluviicola taffensis DSM 16823]
gi|327320089|gb|AEA44581.1| DEAD-like helicase [Fluviicola taffensis DSM 16823]
Length = 591
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 148/449 (32%), Positives = 249/449 (55%), Gaps = 32/449 (7%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNI 256
L++SQ++A+ LSS ++ GPPGTGKT T+ I + V RG K+L A SN AVDN+
Sbjct: 163 LNNSQQEAVGAILSSDLTTVIQGPPGTGKTHTLSIAIAELVNRGKKVLVTAPSNTAVDNL 222
Query: 257 VERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK---ALNGKLL 313
++L+ ++ L+R+G+ ++ +V+ +DA + G + + I+K+++ + + +
Sbjct: 223 CKKLIAAKISLLRVGNNEKVSAEVIPYTIDAYLEGGKTAQYSQTIKKQIQKTEQVANRTI 282
Query: 314 KTKDK---NTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
+ K + +R+ +++LR L KE RK Q +I+++ V+ T + + SF
Sbjct: 283 RNYTKEAADEKRQAKRDLRELQKELRKLAQDTEQQLIESSSVIAGTPVALFNALSKDASF 342
Query: 371 DLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
D+VI+DEA Q+L W+ G + +L GD QLPP V S +A + GL ++L E ++ L
Sbjct: 343 DVVILDEAGQSLAPLTWLVATFGKKLVLCGDPQQLPPVVFSNKAIELGLNKSLLETVSHL 402
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH---PSGVKRTSSTEPTLLLIDIAGC 487
+ +L QYRM I++ + YN++++ PSG + ID+AG
Sbjct: 403 ---QKPVLLNEQYRMAPEIVSTINPYFYNNELQTAIGIPSG---------EIQFIDMAGF 450
Query: 488 DMEEKKDEEDSTM-NEGEAEVAMAHAKRLIQS-GVHASDIGIITPYAAQVVLLKILRSKD 545
E ++E + N E +V ++LI+S ++ + II PY+AQ+ LL+ +
Sbjct: 451 GNGETENETTGSFENWDEVKV----VRKLIESESLNPTQTTIIAPYSAQIALLQKTMGTE 506
Query: 546 DKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCD 605
VST+D QG+E+E I+IS RSN +GFL D RR NVA++RA+R+C L+ D
Sbjct: 507 -----WHVSTIDAIQGQEEENIVISFTRSNPDGIIGFLRDYRRTNVAISRAKRKCYLIGD 561
Query: 606 TETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
+ T+ +D F +LI E + Y S E+
Sbjct: 562 SATLGNDSFYSQLIHEIETNGVYRSAWEF 590
>gi|297619674|ref|YP_003707779.1| DNA helicase [Methanococcus voltae A3]
gi|297378651|gb|ADI36806.1| DNA helicase [Methanococcus voltae A3]
Length = 732
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 186/654 (28%), Positives = 324/654 (49%), Gaps = 147/654 (22%)
Query: 105 GSPALGQ--GVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDAL--IQLS 160
G+P L G V + + I V+ + +P+ L +R++ N+VT++RM AL +++
Sbjct: 85 GNPLLSDFYGNVIAIGSNHIDVSVESVPKWALKD-VRIDLYVNDVTFKRMVKALEKFEIT 143
Query: 161 KGVQNGPAAGL-IPVLFGEQKPTV----LKKDIAFKPFNS-------------------- 195
+ + P + T+ LK DI N+
Sbjct: 144 RKKIANIIINIEKPKYCSIDEKTLKYLDLKNDINLSTINTKNTENTEKLTTEIIENFEYC 203
Query: 196 --NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAV 253
NL++ QK+A+ AL+S +++++HGPPGTGKT T+ EII+QE KRG+ ++A A SN AV
Sbjct: 204 DNNLNYFQKEAVISALTSNDLYLVHGPPGTGKTRTITEIIIQESKRGNSVIATADSNTAV 263
Query: 254 DNIVERLVP------------------------------------HRVRLVRLGHPARLL 277
DNI+E L ++++VR+GHP+R+
Sbjct: 264 DNILENLAKAPKIAKKLKITYDAKYNPKNNFKNNPKKDNIRKNGLEKLKIVRIGHPSRIS 323
Query: 278 PQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKLLKTKDKNTRR-----------EI 324
++++ +L +++ + + +R+ E + L K + + D RR ++
Sbjct: 324 KELIDYSLHSKITKHELYIKIVKLRELLEREYLKRKDMPSPDPKFRRGLTNDDIVLYAKL 383
Query: 325 QKELRTLSKEE---------------------RKRQQLAVTDVIKNADVVLTTLTGAVSR 363
++ +R + ++ K ++ + D+I+N+DVVL T + A S
Sbjct: 384 KQRIRGIPPQKIEEMALWVKCNEKIAKIKDKIVKTEKQIICDIIENSDVVLATNSMAGSE 443
Query: 364 KLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTL 423
L++ F++ +IDE +Q++E + I LK + I+AGDH QLPPTV S E E L TL
Sbjct: 444 YLEDFEFNVGVIDECSQSMEPSTLITALKCDKIIMAGDHKQLPPTVLSDELE---LKNTL 500
Query: 424 FERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS--------- 474
FER+ D + +L +QYRM++ IM +S+ YN+++ + S + S
Sbjct: 501 FERMIKKNKD-FSQILKIQYRMNDKIMGFSNGLFYNNQLVSDNSVKNQVLSDLNPNLDLN 559
Query: 475 -----------TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHAS 523
+ L+LI+I+G EK+D+ S N E ++ +++ +
Sbjct: 560 LELGSIMEGLFNDNPLVLINISG---NEKRDDFKSYYNTSELKIVDIIVDNYLKNDLP-- 614
Query: 524 DIGIITPYAAQVVLLKILRSK--DDKLK----------NMEVSTVDGFQGREKEAIIISM 571
I +I+PY AQV +K + SK D+++ N++V ++DG+QGRE E I++S
Sbjct: 615 -ISVISPYDAQVKKIKEMLSKYETDEIEDNEIINGRNVNVKVKSIDGYQGRENEIIVVSF 673
Query: 572 VRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEH 625
VRS +++GFLSD RR+NVA+TRA+R+ LV + + ++S+ L +Y E+
Sbjct: 674 VRS---EKIGFLSDLRRLNVALTRAKRKLILVGNFDFLTSNSTYSDLYDYMVEN 724
>gi|428165968|gb|EKX34953.1| hypothetical protein GUITHDRAFT_80206, partial [Guillardia theta
CCMP2712]
Length = 228
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 159/227 (70%), Gaps = 12/227 (5%)
Query: 381 ALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLT 440
A+E++CWI +L+ R +LAGD QL PT+ S EA KGLGRTLF+R+ + +G+EV MLT
Sbjct: 2 AVEVSCWIPILRSKRLVLAGDDCQLAPTIISKEAADKGLGRTLFQRVREEHGEEVMRMLT 61
Query: 441 VQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTSSTEPTLLLIDIAGCDME 490
VQYRMHE I +WSS +Y ++ GVK T+ T L++ID GC ME
Sbjct: 62 VQYRMHEDISDWSSGAMYGGRLVPADGVRRRTLLELPGVKETAETSSVLVVIDTDGCGME 121
Query: 491 EKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN 550
E++DE+ S+ NEGEA V H +RL+ +GV IG++ PY QV +L+ R K +K +
Sbjct: 122 EEQDEKGSSRNEGEALVVQEHLERLLAAGVQEESIGVLAPYNGQVAVLRD-RLK-EKYRG 179
Query: 551 MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
+E+ TVDGFQGREK+A+++S+VRSN+++EVGFLSD RR+NVA+TRA+
Sbjct: 180 VEIGTVDGFQGREKDALLLSLVRSNTRREVGFLSDDRRLNVAITRAK 226
>gi|320580629|gb|EFW94851.1| ATP-dependent helicase NAM7 [Ogataea parapolymorpha DL-1]
Length = 909
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 184/577 (31%), Positives = 290/577 (50%), Gaps = 58/577 (10%)
Query: 88 KFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSS---ITVAFDD-----IPEEGLNSPLR 139
K D ++L+ N ++L P G + R+ ++ T+ D +P L++
Sbjct: 248 KLAVGDQMILRYNGSELAEPWEQSGFIVRIPSATRETFTLELIDSKNKSVPTH-LHTGFT 306
Query: 140 LEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV---LKKDIAFK-PFNS 195
E + +Y RM+DAL +L+ + + + L G P++ +KK ++ P +
Sbjct: 307 AELVWKGTSYARMQDALKKLAVN-KKSVSEHIYYALMGIDAPSIEFRVKKKKSYSIPNFA 365
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVD 254
L+ SQ++AI LS K + ++ GPPGTGKT T I+ Q K +IL CA SNIAVD
Sbjct: 366 KLNASQENAIHNVLS-KPLSLIQGPPGTGKTVTSATIVYQLTKLHKGQILVCAPSNIAVD 424
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
++ +L +R++RL +R + +ES++ + SL +RK +LL
Sbjct: 425 HLASKLEQLGLRVLRLIAKSR---EDVESSVQ-------HLSLTEQMRKHASKDLKRLLA 474
Query: 315 TKDKN---TRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
K+KN + + ++ L KEE ++ V+ T GA R+L F
Sbjct: 475 LKEKNGELSASQYKQMASLLYKEE--------ALLMDKCQVICCTCVGAGDRRLAKRKFR 526
Query: 372 LVIIDEAAQALEIACWIALLKGS-RCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ QA E C I ++KG+ + IL GDH QL P + S +A GL ++LFERL +
Sbjct: 527 TVLIDESTQASEPECLIPIVKGANQVILVGDHQQLGPVILSRKAGDAGLRQSLFERL--I 584
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEP---------TLLL 481
Y + L VQYRMH + +SS Y+ ++ +GV S + P + +
Sbjct: 585 YLGHMPIRLEVQYRMHPCLSEFSSNVFYDGSLQ---NGVTAESRSRPDSTFPWPIREIPM 641
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVL---- 537
+ A EE S +N EA RL++ GV IG+ITPYA Q
Sbjct: 642 MFWAVFGREELSASGTSYLNRTEAMNCEKIITRLLKEGVDPGKIGVITPYAGQATFIVQY 701
Query: 538 --LKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
+ L + + +EV++VD FQGREK+ II+S VR+N + +GFLSD RR+NVA+TR
Sbjct: 702 MEMNGLIADKSRYSEVEVASVDSFQGREKDYIILSCVRANDNQLIGFLSDPRRLNVALTR 761
Query: 596 ARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
AR ++ + +T+S + RL+ +F E + GS
Sbjct: 762 ARFGMAILGNPKTLSKNPMWNRLLMHFREKGCLVDGS 798
>gi|393903974|gb|EFO18850.2| hypothetical protein LOAG_09644, partial [Loa loa]
Length = 685
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 232/465 (49%), Gaps = 60/465 (12%)
Query: 197 LDHSQKDAISKALS-SKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDN 255
L+ Q+ A+S AL+ S+ + +HGPPGTGKT + EI+++ V R K+L CA SN+AV+N
Sbjct: 221 LNEDQRRAVSAALNKSRPIVTIHGPPGTGKTAVIAEIVIEAVSRKQKVLICAPSNVAVNN 280
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLA-----------SDIRKE 304
IV+RL LD + G NS L+ SDI+
Sbjct: 281 IVDRL----------------------KDLDGICVLGFNSELSLASELEQHDKFSDIQCA 318
Query: 305 MKALNGKLLK-TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSR 363
K L+ + N R E K SK ++ ++ V++ TLT + R
Sbjct: 319 FKKLHSEEGSGIISGNNRDEHGKAWHHASKMLWNLKE----SIVSCKQVIVCTLTNSSLR 374
Query: 364 KLDNTSF--DLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA-EKKGLG 420
L F +L IIDEAAQALE W +LL R ++ GD QLPP +++ E +
Sbjct: 375 FLREQGFQPNLTIIDEAAQALECVAWYSLLLSRRAVIVGDLWQLPPVLKTSRLREMDDIS 434
Query: 421 RTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHP----------SGVK 470
+L + L+ +G+ + MLT QYRM++ IM W S Y S+++ + S V
Sbjct: 435 NSLLDTLSKRFGETNSFMLTEQYRMNKKIMKWPSSFFYKSQLRPNEHIANQLLSDISKVP 494
Query: 471 RTSSTEPTLLLIDIAGCDMEE--KKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
+ S + ++ ID + E +K S N EA++ + + L GV DIGII
Sbjct: 495 KGSLFDEPMVFIDTSHDKSAENIEKLYRYSYANALEAKLIIRYVTALSTFGVREEDIGII 554
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
PY AQV +LK LK V++VD FQG+E E +++S+VR+NS +GFL D RR
Sbjct: 555 APYIAQVDMLK------KSLKTSRVNSVDAFQGQECEVVVMSLVRNNSDGRIGFLKDERR 608
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSE 633
NVAVTRARRQ LV + + L+ L EY + H + E
Sbjct: 609 FNVAVTRARRQFVLVGNVRMMKHAAHLQSLTEYMQSHGRIVKQEE 653
>gi|388851704|emb|CCF54700.1| related to HCS1-DNA helicase A [Ustilago hordei]
Length = 850
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 163/477 (34%), Positives = 228/477 (47%), Gaps = 106/477 (22%)
Query: 48 TAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDV----LPAHKFGTHDVVVLKPNKAD 103
T +K G +L+L + G+ K L+EF+ P H F T D+ + N AD
Sbjct: 49 TLEKHGLALLSLGVASIRIGVGAKLLVEFERPSAHYSSPNFPPHSFRTGDLAAVLDNGAD 108
Query: 104 ---LGSPALGQGVVYRLKDSSITVAFDD-------------------------------- 128
L GVVYR+ D+ IT+A D
Sbjct: 109 PQATNESGLLSGVVYRVNDTRITLAISDGKKGAGGGAKGLGSEGKERGGNKRDVRNGDSN 168
Query: 129 -IPEEGLNSP--LRLEKLANEVTYRRMKDALIQLSK--GVQ--NGPAAG----------- 170
+ L+ P +RL K+ANE T+ R+++ L +L+K GV NG AG
Sbjct: 169 KVSGNDLDLPERIRLVKVANESTFDRLENTLDKLAKTLGVSFANGANAGGDTSAEDEPPT 228
Query: 171 ------------LIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLH 218
LFG PT D+ PFN NL+ +Q DAI LS+ + ++H
Sbjct: 229 PSSSSSSGNATSFTRSLFGLTPPTWKSIDLPLPPFNPNLNTTQLDAIRHCLSADHFSLIH 288
Query: 219 GPPGTGKTTTVVEIILQ---------EVKRGSKILACAASNIAVDNIVERLV---PHR-- 264
GPPGTGKTT +VE+I+Q E +IL C ASN+AVDNI+ERLV HR
Sbjct: 289 GPPGTGKTTAIVELIMQIVASNFGATEPNAPVRILVCGASNLAVDNILERLVGSPEHREV 348
Query: 265 -----VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDK- 318
+ + R+GHPAR++ + S LDAQ + L DI KE++ + +L + +
Sbjct: 349 FKKKLIGVTRIGHPARVVANLASSTLDAQCTTSSEAQLVKDISKEIEGIMSELKPSSNPA 408
Query: 319 -------------NTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKL 365
N R++ +E+R L KE R+R + V+ A VVL T A ++L
Sbjct: 409 GNKSTRGQPKVRGNDRKKRWEEVRELRKEYRRRDRQVTCSVLDRAQVVLATCHTAGGKQL 468
Query: 366 DNTSFDLVIIDEAAQALEIACWIALLK---GSRCILAGDHLQLPPTVQS-VEAEKKG 418
+D V+IDEA QA+E+ CWI +LK G R +LAGDHLQLPPTV+S + KKG
Sbjct: 469 ARREYDWVVIDEACQAVELGCWIPILKCREGGRVVLAGDHLQLPPTVKSNIGMSKKG 525
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 140/247 (56%), Gaps = 42/247 (17%)
Query: 422 TLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS--GVKRT--SSTEP 477
TLF RL LYG + S+L++QYRM+ IM++ + LY SK+ AHPS ++ T S+ P
Sbjct: 595 TLFSRLLGLYGPGIKSLLSIQYRMNTSIMSFPNLSLYESKLTAHPSCADIRLTDLSNLHP 654
Query: 478 --------------TLLLIDIAGCDMEE--KKDEE-----DSTMNEGEAEVAMAHAKRLI 516
++ D +GC+ E EE DS N E E+ + H + L
Sbjct: 655 LTDLEDEEEKELLAPVVFYDTSGCEFYETTPSPEEGLLLADSKSNTHEVELVVKHLEELF 714
Query: 517 QSGVHASDIGIITPYAAQVVLL-KILRSKDDKL-----------KNMEVSTVDGFQGREK 564
GV A + ++TPY+AQV LL ++RS + +E+ T+D QGREK
Sbjct: 715 ARGVVAGQVTVLTPYSAQVALLHSVIRSHRFSAPENGGGEVVNGEEIELGTIDSMQGREK 774
Query: 565 EAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS-----DGFLKRLI 619
+ +IIS+VRSN++++VGFL+ ++R+NVA+TRA+RQ +V D ET+ + D FL + +
Sbjct: 775 DVVIISLVRSNAEQQVGFLAQKKRLNVAITRAKRQLVVVGDAETIGNAKDLPDDFLPKYM 834
Query: 620 EYFEEHA 626
E+ +E A
Sbjct: 835 EWLDEEA 841
>gi|298707435|emb|CBJ30064.1| RNA helicase [Ectocarpus siliculosus]
Length = 1101
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 175/553 (31%), Positives = 278/553 (50%), Gaps = 60/553 (10%)
Query: 105 GSPALGQGVVYRLKDSSITVAF--DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKG 162
G P G G V R+ DS + + +P E + +++ + V+Y RM+ AL +
Sbjct: 408 GKPWEGLGHVLRIADSEVALMMLGGMVPTE-ITDGYQVDFVWKAVSYDRMQVALKTFA-- 464
Query: 163 VQNGPAAGLIP--VLFGEQKPTVLKKDIAFK---PFNSNLDHSQKDAISKALSSKNVFML 217
V + +G I +L E +P VL+ + + P L+HSQ A+ KA+ + + ++
Sbjct: 465 VDDTSVSGYIYHRLLGHEVEPQVLRVTLPPRFSAPGLPELNHSQFTAV-KAVLQRPLSLI 523
Query: 218 HGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARL 276
GPPGTGKT T ++ ++G ++L CA SN+AVD++ ++ +R+VRL +R
Sbjct: 524 QGPPGTGKTVTSATLVYHLARQGMGQVLVCAPSNVAVDHLTAKISATGLRVVRLCAKSR- 582
Query: 277 LPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQ---KELRTLSK 333
A+ V D+ SL +R L T DK R++Q EL L
Sbjct: 583 ------EAVSTDV---DHLSLHVMVRA---------LDTPDKQDLRKLQLLKDELGELVA 624
Query: 334 EERKR----QQLAVTDVIKNADVVLTTLTGAVSRKLDNTS--FDLVIIDEAAQALEIACW 387
+ KR + A ++++ ADV+ TT GA +L N + F V+IDEA QA+E C
Sbjct: 625 ADEKRFRRLRSSAEREILQAADVICTTCVGAGDPRLSNVNLRFRQVLIDEATQAMEAECL 684
Query: 388 IALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMH 446
I ++ G++ +L GDH QL P V ++ K GL ++LFERL L V L VQYRMH
Sbjct: 685 IPIVMGAKQLVLVGDHCQLGPVVLCKKSSKAGLTQSLFERLVLLGIRPVR--LQVQYRMH 742
Query: 447 EHIMNWSSKQLYNSKIKAHPSGVKRTS---------STEPTLLLIDIAGCDMEEKKDEED 497
+ W S Y ++ + +R ++P L+ +EE
Sbjct: 743 PCLSEWPSNMFYEGTLQNGVTEGERVMDQVDFPWPVPSKPMFFLMTTG---VEEISSSGT 799
Query: 498 STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN-----ME 552
S +N EA R +Q GV IG++TPY Q L + L++ +E
Sbjct: 800 SYLNRTEATAVEKCVTRFLQKGVTPDQIGVVTPYEGQRSYLVDHLQRTGSLRSSLYSEIE 859
Query: 553 VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSD 612
V++VD FQGREK+ I+++ VRSN + +GFLSD RR+NVA+TRAR C ++ + ++ +
Sbjct: 860 VASVDSFQGREKDLILLTCVRSNEHQGIGFLSDPRRLNVALTRARFGCIIIGNPRILAKN 919
Query: 613 GFLKRLIEYFEEH 625
L+ ++++H
Sbjct: 920 PLWNALVNFYKDH 932
>gi|326490191|dbj|BAJ94169.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 786
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 162/501 (32%), Positives = 273/501 (54%), Gaps = 51/501 (10%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITS-GASRNLDT-----------------AQKKGSTI 56
+++FV M+ L+ +E++AE+ + A+ LD Q++ TI
Sbjct: 275 IEDFVRHMSDLLRIERDAELEFTQEELNATTMLDNNSKPSKPVEYLVTHGQAQQEQCDTI 334
Query: 57 LNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKP-NKADLGSPALGQGVVY 115
NL + + TGL G L+ F+ LP D+V ++ N G+ + QG +Y
Sbjct: 335 CNLSVISSSTGLGGLHLVLFRIEGEHKLPPTTLSPGDMVCVRTCNSRGEGATSCMQGFLY 394
Query: 116 RLKD--SSITVAFDDIPEEGLNSPL--------RLEKLANEVTYRRMKDALIQLSKG--V 163
L + SITVA + + S L R++ LA+ +TY R +AL+ L + +
Sbjct: 395 NLGEDGCSITVALESRHGDPTFSRLFGKSVRIDRIQGLADALTYERNLEALMLLQRNGLL 454
Query: 164 QNGPAAGLIPVLFGEQKPTV-LKKDIAFKPFNSNL-----------DHSQKDAISKALSS 211
++ + ++ LFG+ K + ++++ S+L D SQ A+S L+
Sbjct: 455 KSNASIDVVATLFGDGKDVMKMEQNCLIDWGESSLPDPRLSERYAFDDSQLRALSLGLNK 514
Query: 212 KN-VFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRL 270
K V ++ GPPGTGKT + E+I++ V++G +L A SN AVDN+VE+L + +VR+
Sbjct: 515 KRPVLVIQGPPGTGKTVLLTELIVRAVRQGENVLVTAPSNAAVDNMVEKLSSTGLNIVRV 574
Query: 271 GHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT-KDKNTRREIQKELR 329
G+PAR+ P V +L A+++ G S ++ ++ L L +D + I++ L+
Sbjct: 575 GNPARISPSVTSKSL-AEIVNGRLSQFRKELERKRTDLRKDLRDCIEDDSLAAGIRQLLK 633
Query: 330 TLSKEERKRQQLAVTDVIKNADVVLTTLTGAVS---RKLDNTSFDLVIIDEAAQALEIAC 386
L ++ +++ + +V+ +A VVL+T TGA RK+ FDLVIIDEA Q +E +C
Sbjct: 634 QLGRDLEMKEKETIMEVLSDAQVVLSTNTGAADPLIRKIG--CFDLVIIDEAGQGIEPSC 691
Query: 387 WIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMH 446
WI +L+G RCILAGDH QL P + S +A + GLG+++ ER + L+ +T+ LTVQ+RMH
Sbjct: 692 WIPILQGKRCILAGDHCQLAPAILSRKALEGGLGKSMMERASLLHDGLLTTRLTVQHRMH 751
Query: 447 EHIMNWSSKQLYNSKIKAHPS 467
+ I +W+SK++Y +++ S
Sbjct: 752 DSIASWASKEMYQGLLQSSHS 772
>gi|145491971|ref|XP_001431984.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399091|emb|CAK64586.1| unnamed protein product [Paramecium tetraurelia]
Length = 935
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 157/457 (34%), Positives = 242/457 (52%), Gaps = 38/457 (8%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-------RGSKILACAA 248
+L+ Q DA+ KAL S + ++ GPPGTGKT T I+ Q VK RG +IL CA
Sbjct: 374 DLNVYQADAVKKALKSP-LSLIQGPPGTGKTVTSATIVYQLVKAMEKQKQRG-QILVCAP 431
Query: 249 SNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKAL 308
SNI VD + E++ V++VRL R + + + ++ L SL +++A
Sbjct: 432 SNIVVDQLAEKINKTGVKVVRLCSKTR---ESVSTNIEFLTLHSQVRSLDIPQYHQLQAF 488
Query: 309 NGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNT 368
+LL + + +++ Q +R + E+ ++I+ AD++ TT G+ ++L
Sbjct: 489 Y-ELLDQQGELDQKDEQVFIRMRDEAEK--------EIIEQADIICTTCIGSADKRLKEM 539
Query: 369 SFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERL 427
F V+IDEA QA+E C + +LKG++ IL GDH QL P VQS EA GL R+LFERL
Sbjct: 540 RFLFVLIDEATQAIEPECLLPMLKGAKHVILVGDHRQLGPVVQSREAASVGLDRSLFERL 599
Query: 428 ADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS-------TEPTLL 480
L V L VQYRMH + + S Y ++ + RT S + ++
Sbjct: 600 VQLGIRPVR--LQVQYRMHPELTVFPSNTFYEGTLQNGVTISDRTHSGNFPWPNKQKPMI 657
Query: 481 LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLK 539
I++ G E+ S +N EA L Q+ V + IGIITPY Q +L
Sbjct: 658 FINVTG--QEQLSASGTSYLNTQEAVAVEQAVYYLYQNTVKLNKIGIITPYKGQRTYILS 715
Query: 540 ILRSKD----DKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
L+ ++ +++EV++VDGFQGREK+ IIIS VRSN + +GFL++ RR+NV +TR
Sbjct: 716 YLQRNGQLPYNQYRDIEVASVDGFQGREKDFIIISCVRSNDTQGIGFLTNPRRLNVTITR 775
Query: 596 ARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
AR ++ + +S D ++ +F++ + GS
Sbjct: 776 ARYGLIVIGNARVLSKDNLWNNMLNHFKDLDLLMEGS 812
>gi|402593133|gb|EJW87060.1| hypothetical protein WUBG_02029 [Wuchereria bancrofti]
Length = 681
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 157/454 (34%), Positives = 230/454 (50%), Gaps = 39/454 (8%)
Query: 197 LDHSQKDAISKALS-SKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDN 255
L+ Q+ A+ AL+ S+ + +HGPPGTGKT + EI+L+ V R K+L CA SN+AV+N
Sbjct: 224 LNEDQRRAVFAALNKSRPIVTIHGPPGTGKTAVIAEIVLEAVSRKQKVLICAPSNVAVNN 283
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
IV+RL + LG + L +L A++ + D DI+ K L+
Sbjct: 284 IVDRL-KDLAGICALGFNSEL-------SLAAELEQHDK---FVDIQCAFKKLDSGESNG 332
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF--DLV 373
N E +K SK ++ +I + V++ TLT R L F L
Sbjct: 333 ISGNNHDEHKKAWHDASKMLWHLKE----TIISSKQVIVCTLTNNSLRFLREHGFQPSLT 388
Query: 374 IIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA-EKKGLGRTLFERLADLYG 432
+IDEAAQALE W +LL R ++ GD QLPP +++ E + +L + L +G
Sbjct: 389 VIDEAAQALECVAWYSLLLSPRAVIVGDPWQLPPVLKTSRLLEMDDINNSLMDTLFKRFG 448
Query: 433 DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHP----------SGVKRTSSTEPTLLLI 482
+ MLT QYRM++ IM W S Y S+++ + S V + S + ++ I
Sbjct: 449 KTNSFMLTEQYRMNKKIMEWPSSFFYQSQLRPNEHIADQLLSDISKVPKGSLFDEPMIFI 508
Query: 483 DIAGCDMEEKKDEE---DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK 539
D + D + +E+ S N E ++ + + L GV DIGII PY AQV +LK
Sbjct: 509 DTSH-DKSARSNEKLYRYSYANALEVKLIIKYVTALSMFGVQEKDIGIIAPYVAQVDMLK 567
Query: 540 ILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 599
LK V++VD FQG+E E +++S+VR+N +GFL D RR NVAVTRARRQ
Sbjct: 568 ------KSLKTSRVNSVDAFQGQECEVVVMSLVRNNGDGRIGFLKDERRFNVAVTRARRQ 621
Query: 600 CCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSE 633
LV + L+ LIEY + H + E
Sbjct: 622 FVLVGSAVMMKHAKHLQSLIEYMQRHGRIIKQEE 655
>gi|392567172|gb|EIW60347.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 788
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 166/461 (36%), Positives = 242/461 (52%), Gaps = 69/461 (14%)
Query: 15 LQEFVSVMAPLIDLEKEAEI---SASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGK 71
L F++ L+ E+EAEI S +++ A + L ++KG + L GL GK
Sbjct: 7 LNAFIARHRELLKREREAEIERTSLLLSNCAPKLL---EQKGLALCGLGTTSVGIGLGGK 63
Query: 72 TLLEFQSTKG----DVLPAHKFGTHDVVVL-------------KPNKA---DLGSPALGQ 111
TL+E + + P H D+ + KP KA D +
Sbjct: 64 TLVELERPTAYHSTPIFPPHSLRPGDLARIEEHTTSAASKKTAKPKKAGATDKPKDDGVE 123
Query: 112 GVVYRLKDSSITVAFDDIPE---EGLNSP--LRLEKLANEVTYRRMKDALIQLSKGVQNG 166
GV+Y++ D+ I +A D PE E LN P R+ KLAN VTY RM AL QL K V
Sbjct: 124 GVIYKVSDTKIVIAVDP-PETSGEDLNIPERCRVVKLANSVTYDRMDKALDQLEKLVLPN 182
Query: 167 PAA----------GLIPVLFGEQKPT--VLKKDIAFKPFNSNLDHSQKDAISKALSSKNV 214
A LI VL G P+ V KD+ F F+ +L+ SQ++AI AL S V
Sbjct: 183 SDAKEDKFLPKMTNLIRVLMGMTAPSERVPVKDLTF--FDKSLNSSQQEAIRFALGSPEV 240
Query: 215 FMLHGPPGTGKTTTVVEIILQEVK------RGSKILACAASNIAVDNIVERLV----PH- 263
+HGPPGTGKT T++E+I + ++L C ASN++VDNI+ERL+ P
Sbjct: 241 ACIHGPPGTGKTHTLIELIRHFTSATPSNPKPLRLLVCGASNMSVDNILERLLALPAPEG 300
Query: 264 --RVRLVRLGHPARLLPQ--VLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKN 319
++++ R+GHPAR++ V+E+ L+ Q R D ++LA D++ E++ G L
Sbjct: 301 GAKLKVTRIGHPARVMAHENVIEATLEVQASRSDEAALAKDVKNELETALGVLSGKGKGT 360
Query: 320 T--------RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
R+++ ++R L KE R+R+ V V+K+A VVL T + R+L N +FD
Sbjct: 361 KGKGPRGLERKKMWDDVRALRKEYRQREGGVVRSVLKDAQVVLATCHSSGGRQLWNQNFD 420
Query: 372 LVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSV 412
+VIIDEA QALE CW+ + K + ILAGD +QLPPT+ S+
Sbjct: 421 VVIIDEATQALEAVCWVPIFKAQKLILAGDPMQLPPTIISL 461
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 103/239 (43%), Positives = 138/239 (57%), Gaps = 23/239 (9%)
Query: 410 QSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGV 469
Q+V L TLFERL +YG + MLTVQYRMH+ I + SK +Y+SK+ +HPS
Sbjct: 545 QAVLRPPSTLEMTLFERLEKMYGPGIKRMLTVQYRMHKQIATFPSKIMYHSKLTSHPSVA 604
Query: 470 KRTSSTEPTL----------------LLIDIAGCDMEEKKD---EEDSTMNEGEAEVAMA 510
P + D AGC+ E+ + +E S NE EA V
Sbjct: 605 SHLLRDLPNTKADSEEDEKEILGTPAVFYDTAGCEYFERVEGDGDEGSRCNENEASVVKM 664
Query: 511 HAKRLIQSGVHASDIGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIII 569
+L+ +GV S I +ITPY AQV LL +LR +E+ TVDG QGREKEAI+I
Sbjct: 665 WLDQLVGAGVQPSQIAVITPYQAQVTLLTSLLRPIFGA--ELEIGTVDGMQGREKEAIVI 722
Query: 570 SMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS-SDGFLKRLIEYFEEHAE 627
S+VRSN K+EVGFL D+RR+NVA+TRARR C+V D+ TV FLK+ + + + +A+
Sbjct: 723 SLVRSNEKREVGFLKDKRRLNVAMTRARRHLCVVGDSSTVQHGSPFLKKWMAWLDANAD 781
>gi|170572722|ref|XP_001892210.1| Regulator of nonsense transcripts 1 homolog [Brugia malayi]
gi|158602607|gb|EDP38975.1| Regulator of nonsense transcripts 1 homolog, putative [Brugia
malayi]
Length = 501
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 157/454 (34%), Positives = 230/454 (50%), Gaps = 37/454 (8%)
Query: 197 LDHSQKDAISKALS-SKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDN 255
L+ Q+ A+ AL+ S+ + +HGPPGTGKT + EI+L+ V R K+L CA SNIAV+N
Sbjct: 53 LNEDQRRAVFAALNKSRPIVTIHGPPGTGKTAVIAEIVLEAVSRKQKVLICAPSNIAVNN 112
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
IV+RL + LG + L +L A++ + D DI+ K L+
Sbjct: 113 IVDRL-KDLAGICALGFNSEL-------SLAAELEQHDR---FVDIQCAFKKLDSGESNG 161
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD--LV 373
N E +K SK ++ ++ + V++ TLT R L F L
Sbjct: 162 IYGNNCDEHKKVWHDASKMLWHLKE----TIVSSKQVIVCTLTNNSLRFLREHGFQPTLT 217
Query: 374 IIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEA-EKKGLGRTLFERLADLYG 432
+IDEAAQALE W +LL R ++ GD QLPP +++ + +L + L+ +G
Sbjct: 218 VIDEAAQALECVAWYSLLLSPRAVIVGDPWQLPPVLKTSRLLGMDDISNSLMDTLSKRFG 277
Query: 433 DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHP----------SGVKRTSSTEPTLLLI 482
+ + MLT QYRM+ IM W S Y S+++ + S V + S + ++ I
Sbjct: 278 EANSFMLTEQYRMNRKIMEWPSSFFYQSQLRPNEHIADQLLSDISKVPKGSLFDEPMIFI 337
Query: 483 DIAGCDMEEKKDE--EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKI 540
D + E ++ S N EA++ + + L GV DIGII PY AQV +LK
Sbjct: 338 DTSHDKSAESSEKLYRHSYANALEAKLIIKYVTALSMFGVQEKDIGIIAPYVAQVDMLK- 396
Query: 541 LRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
LK V++VD FQG+E E I++S+VR+N +GFL D RR NVAVTRARRQ
Sbjct: 397 -----KSLKTSRVNSVDAFQGQECEVIVMSLVRNNGDGRIGFLKDERRFNVAVTRARRQF 451
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
LV + L+ LIEY + H + E+
Sbjct: 452 VLVGSAIMMKYAKHLRSLIEYMQRHGRIIKQEEF 485
>gi|300709148|ref|XP_002996741.1| hypothetical protein NCER_100116 [Nosema ceranae BRL01]
gi|239606064|gb|EEQ83070.1| hypothetical protein NCER_100116 [Nosema ceranae BRL01]
Length = 618
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 150/442 (33%), Positives = 242/442 (54%), Gaps = 65/442 (14%)
Query: 190 FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAAS 249
F F+ +L+ QK A+ + +K+ + + GPPGTGKT T+VEIILQ + +G K+L S
Sbjct: 219 FDFFDYSLNDCQKLAVLEVFYNKS-YKILGPPGTGKTRTIVEIILQLLNKGQKVLVAGPS 277
Query: 250 NIAVDNIVERL------VPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
N+++DNI+E+ + H RLG + L + L+ Q+ S + S I+K
Sbjct: 278 NVSIDNIIEKFLLSKYYIYHTPIFYRLGSSFKGLTKF---NLENQI-----SQMTSFIKK 329
Query: 304 EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSR 363
E ++N ++ I+K +K +L ++I+ + +V +TL A+
Sbjct: 330 E----------KNERNFKKNIEKI--------KKSYKL---NLIEESKIVFSTLFSALK- 367
Query: 364 KLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTL 423
+N+SFD VIIDEA QA ++ ++ L+KG IL GD QL P S L
Sbjct: 368 --ENSSFDWVIIDEACQASDVETFLTLIKGKNFILIGDPNQLCPKSTS-----------L 414
Query: 424 FERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLID 483
FE+L+ T +L +QYRM ++++ +S++ Y++ IK+H + P ++ ID
Sbjct: 415 FEKLS-----LKTFLLNLQYRMCKNLICFSNEMFYDNNIKSHKIESIDLINKSP-IVFID 468
Query: 484 IAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRS 543
D E +DE S NEGEA++ K L + IGIITPY++Q +LLK L
Sbjct: 469 TDCSDFNETEDEF-SKKNEGEAKMICKVVKYL---KMLKLTIGIITPYSSQAILLKSLFD 524
Query: 544 KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLV 603
+ N+E++TVDGFQGREK+ II+S+VRSN + GFL D +R+NVA+TR++R +V
Sbjct: 525 E-----NVEINTVDGFQGREKDFIILSLVRSNESGDYGFLDDYKRLNVAITRSKRGLVVV 579
Query: 604 CDTETVSSDGFLKRLIEYFEEH 625
+++ + ++ E++
Sbjct: 580 GNSQNFKRSELFSKFFKFLEKN 601
>gi|294643874|ref|ZP_06721665.1| conserved domain protein [Bacteroides ovatus SD CC 2a]
gi|292640780|gb|EFF59007.1| conserved domain protein [Bacteroides ovatus SD CC 2a]
Length = 398
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 214/398 (53%), Gaps = 20/398 (5%)
Query: 239 RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLA 298
R ++L CA SN AVD I E+LV V ++R+G+P R+ ++L S + +
Sbjct: 1 REPQVLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTRVNDKMLSSTYERRFESHPAYPEL 60
Query: 299 SDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLT 358
IRK ++ + G ++ + R ++ + L + + D+ +A V+ +TL
Sbjct: 61 WGIRKSIREM-GSRMRRGSYSEREGMRNRMSRLRDRATELEIQINADLFDSARVIASTLV 119
Query: 359 GAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKG 418
+ R L+ F + IDEAAQALE ACWIA+ K R ILAGDH QLPPT++ +EA + G
Sbjct: 120 SSNHRLLNGRRFPTLFIDEAAQALEAACWIAIRKADRVILAGDHCQLPPTIKCIEASRGG 179
Query: 419 LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEP 477
L TL E++ V S+L VQYRMHE IM + S Y+ +++A P R +
Sbjct: 180 LDHTLMEKVVQQKPSAV-SLLKVQYRMHETIMQFPSDWFYHGELEAAPEVRYRGILDFDT 238
Query: 478 TLLLIDIAGCDMEE----------KKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGI 527
+ ID + D E K E + + E E + +R++ + D G+
Sbjct: 239 PMNWIDTSEMDFHEDFVGESFGRINKQEANLLLQELETYIERIGKERILDERI---DFGL 295
Query: 528 ITPYAAQVVLLKILRSKDDKLKNME----VSTVDGFQGREKEAIIISMVRSNSKKEVGFL 583
I+PY AQV L+ L+ V+TVDGFQG+E++ I IS+VR+N ++GFL
Sbjct: 296 ISPYKAQVQYLRGKIKGSSFLRPFRSLITVNTVDGFQGQERDVIFISLVRANEDGQIGFL 355
Query: 584 SDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEY 621
+D RRMNVA+TRAR + ++ DT T++ F KRL+ +
Sbjct: 356 NDLRRMNVAITRARMKLVILGDTSTLAKHPFYKRLMLF 393
>gi|343426999|emb|CBQ70527.1| related to HCS1-DNA helicase A [Sporisorium reilianum SRZ2]
Length = 861
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 165/466 (35%), Positives = 228/466 (48%), Gaps = 98/466 (21%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGD----VLPAHKFGTHDVVVLKPNKAD-- 103
+K G +L L + G+ K L+E + P H F + D+ + N AD
Sbjct: 51 EKHGLALLGLGVASIRIGVGAKLLVELERPSAHHASANFPPHTFRSGDLAAILDNGADPQ 110
Query: 104 -LGSPALGQGVVYRLKDSSITVAFDD---------IPEEG-------------------L 134
L QGVVY++ D+ I +A D PE L
Sbjct: 111 ATNEAGLVQGVVYKVNDARIVLAISDGKRAAGKSGTPEGQNKRDARSGDSSKVSGGDLEL 170
Query: 135 NSPLRLEKLANEVTYRRMKDALIQLSK--GVQNGPAAG---------------------- 170
+RL K+ANE TY R++ L +L+K GV ++
Sbjct: 171 PERIRLVKVANESTYDRLELTLEKLAKSLGVPLSASSASNADTSAEEAETTASSSAPSAS 230
Query: 171 ---LIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTT 227
L LFG PT ++ PFN NL+ +Q AI ALS+ + ++HGPPGTGKTT
Sbjct: 231 ATSLTRSLFGLSPPTWQHTELPLPPFNQNLNATQLAAIRYALSADHFSLIHGPPGTGKTT 290
Query: 228 TVVEIILQ---------EVKRGSKILACAASNIAVDNIVERLV---PHR-------VRLV 268
+VE+I+Q E +IL C ASN+AVDNI+ERLV HR V +
Sbjct: 291 AIVELIMQIVASNIGAAEAGHPVRILVCGASNLAVDNILERLVGAPEHRDVFRKKSVGVT 350
Query: 269 RLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK---DKNT----- 320
R+GHPAR++ + S LDAQ + + L DI KE++A+ +L T +K+T
Sbjct: 351 RIGHPARVVAALHGSTLDAQCTQSAEAQLVKDISKEIEAIMAELKPTAPAGNKSTRGKPK 410
Query: 321 -----RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVII 375
R++ +E+R L KE R+R + + V+ A VVL T A ++L FD VII
Sbjct: 411 IRGSDRKKRWEEVRELRKEYRRRDRQVTSSVLDRAHVVLATCHSAGGKQLAKRQFDWVII 470
Query: 376 DEAAQALEIACWIALLK---GSRCILAGDHLQLPPTVQS-VEAEKK 417
DEA QALE+ACWI +LK G R +LAGDHLQLPPTV+S V A +K
Sbjct: 471 DEACQALEVACWIPILKAREGGRLVLAGDHLQLPPTVKSTVSAPRK 516
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 140/259 (54%), Gaps = 50/259 (19%)
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGV------- 469
+ L TLF R +YG + S+L++QYRM+ IM + + +LY K+ AH S
Sbjct: 593 RSLETTLFSRALGMYGPRIKSLLSIQYRMNTDIMAFPNTELYEDKLCAHASCADIRLSDL 652
Query: 470 ----KRTSSTE------PTLLLIDIAGCDMEE--KKDEE-----DSTMNEGEAEVAMAHA 512
R+S E ++ D +GC+ E EE DS N E E+ + H
Sbjct: 653 ANLSSRSSGGEDEHELLAPVVFYDTSGCEFYEASPSPEEGVLLADSKSNVHEVELVVRHL 712
Query: 513 KRLIQSGVHASDIGIITPYAAQVVLL----KILR----------SKDDK-------LKNM 551
+ L GVHAS + I+TPY+AQV LL ++ R SK+ + +
Sbjct: 713 EELFARGVHASQVTILTPYSAQVALLHSTVRLHRFSAPPSTTSTSKNSREAETTINTDEI 772
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
E+ TVD QGREK+ +I+S+VRSN++++VGFL+ ++R+NVA+TRA+RQ ++ D ETV+
Sbjct: 773 ELGTVDSMQGREKDVVILSLVRSNAEQQVGFLAQKKRLNVAITRAKRQLVVIGDAETVAG 832
Query: 612 -----DGFLKRLIEYFEEH 625
D FL +++ +EH
Sbjct: 833 AKDLPDRFLPNYMQWLDEH 851
>gi|46136829|ref|XP_390106.1| RNT1_NEUCR Regulator of nonsense transcripts 1 homolog [Gibberella
zeae PH-1]
Length = 1083
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 196/651 (30%), Positives = 320/651 (49%), Gaps = 82/651 (12%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
+ ++ PL+ +E + + + L AQ + + V GL K L+ F
Sbjct: 274 HYQNIFGPLVKMESDYD----------KKLKEAQSEDGLL-----VRWDYGLNNKHLVSF 318
Query: 77 QSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSS---ITVAFDDIP 130
K GDV K D + L+ K +L SP G G V ++ ++ +T+
Sbjct: 319 NLHKIESGDV----KLAVGDEMRLR-YKGELRSPWEGVGYVIKIPNNQSDEVTLELRKTG 373
Query: 131 EE-----GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI--PVLFGEQKPTV 183
E L+ + + +Y RM+ A+ + V + +G I +L E + V
Sbjct: 374 NEKLVPTDLSHNFSADYVWKATSYDRMQLAMKTFA--VDDMSVSGYIFHTLLGHEVQLQV 431
Query: 184 LKKDIAFK---PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-R 239
+K ++ K P +L+ SQ AI KA+ K + ++ GPPGTGKT T II K
Sbjct: 432 MKTNLPKKWSAPGLPDLNPSQVGAI-KAVLQKPLSLIQGPPGTGKTVTSATIIYHLAKMS 490
Query: 240 GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLAS 299
G+++L CA SN+AVD + ER+ +++VRL +R + +ES++ S LA
Sbjct: 491 GNQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAKSR---EDVESSV---------SFLAL 538
Query: 300 DIRKEMKALNGKLLKTKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLT 355
+ M N +L+K +++ EL LS ++E+K +QL A D++ NADVV
Sbjct: 539 HEQVRMSEHNSELVKLS------QLKNELGELSSQDEKKYKQLTKIAERDILNNADVVCC 592
Query: 356 TLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEA 414
T GA +L F V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A
Sbjct: 593 TCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKA 652
Query: 415 EKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK---AHPSGVKR 471
K GL ++LFERL +L + L +QYRMH + + S Y+ ++ H + +++
Sbjct: 653 AKAGLNQSLFERLVNLKLSPIR--LNIQYRMHPCLSEFPSNMFYDGSLQNGVTHENRLRK 710
Query: 472 TSSTE------PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDI 525
P + ++ EE S +N EA R ++GV +DI
Sbjct: 711 DVDFPWPVGEMPMMFWSNLG---HEEISASGTSYLNRTEASNVEKAVTRFFKAGVKPADI 767
Query: 526 GIITPYAAQ--VVLLKILRS---KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEV 580
G+ITPY Q ++ + S K + K +EV++VD FQGREK+ I++S VRSN + +
Sbjct: 768 GVITPYEGQRSYIVTTMQNSGTYKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGI 827
Query: 581 GFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
GFLSD RR+NVA+TRA+ ++ + + +S L+ +F++ ++ G
Sbjct: 828 GFLSDPRRLNVALTRAKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEG 878
>gi|408397555|gb|EKJ76696.1| hypothetical protein FPSE_03107 [Fusarium pseudograminearum CS3096]
Length = 1083
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 196/651 (30%), Positives = 320/651 (49%), Gaps = 82/651 (12%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
+ ++ PL+ +E + + + L AQ + + V GL K L+ F
Sbjct: 274 HYQNIFGPLVKMESDYD----------KKLKEAQSEDGLL-----VRWDYGLNNKHLVSF 318
Query: 77 QSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSS---ITVAFDDIP 130
K GDV K D + L+ K +L SP G G V ++ ++ +T+
Sbjct: 319 NLHKIESGDV----KLAVGDEMRLR-YKGELRSPWEGVGYVIKIPNNQSDEVTLELRKTG 373
Query: 131 EE-----GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI--PVLFGEQKPTV 183
E L+ + + +Y RM+ A+ + V + +G I +L E + V
Sbjct: 374 NEKLVPTDLSHNFSADYVWKATSYDRMQLAMKTFA--VDDMSVSGYIFHTLLGHEVQLQV 431
Query: 184 LKKDIAFK---PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-R 239
+K ++ K P +L+ SQ AI KA+ K + ++ GPPGTGKT T II K
Sbjct: 432 MKTNLPKKWSAPGLPDLNPSQVGAI-KAVLQKPLSLIQGPPGTGKTVTSATIIYHLAKMS 490
Query: 240 GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLAS 299
G+++L CA SN+AVD + ER+ +++VRL +R + +ES++ S LA
Sbjct: 491 GNQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAKSR---EDVESSV---------SFLAL 538
Query: 300 DIRKEMKALNGKLLKTKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLT 355
+ M N +L+K +++ EL LS ++E+K +QL A D++ NADVV
Sbjct: 539 HEQVRMSEHNSELVKLS------QLKNELGELSSQDEKKYKQLTKIAERDILNNADVVCC 592
Query: 356 TLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEA 414
T GA +L F V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A
Sbjct: 593 TCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKA 652
Query: 415 EKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK---AHPSGVKR 471
K GL ++LFERL +L + L +QYRMH + + S Y+ ++ H + +++
Sbjct: 653 AKAGLNQSLFERLVNLKLSPIR--LNIQYRMHPCLSEFPSNMFYDGSLQNGVTHENRLRK 710
Query: 472 TSSTE------PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDI 525
P + ++ EE S +N EA R ++GV +DI
Sbjct: 711 DVDFPWPVGEMPMMFWSNLG---HEEISASGTSYLNRTEASNVEKAVTRFFKAGVKPADI 767
Query: 526 GIITPYAAQ--VVLLKILRS---KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEV 580
G+ITPY Q ++ + S K + K +EV++VD FQGREK+ I++S VRSN + +
Sbjct: 768 GVITPYEGQRSYIVTTMQNSGTYKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGI 827
Query: 581 GFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
GFLSD RR+NVA+TRA+ ++ + + +S L+ +F++ ++ G
Sbjct: 828 GFLSDPRRLNVALTRAKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEG 878
>gi|342879017|gb|EGU80294.1| hypothetical protein FOXB_09221 [Fusarium oxysporum Fo5176]
Length = 1083
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 196/651 (30%), Positives = 320/651 (49%), Gaps = 82/651 (12%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
+ ++ PL+ +E + + + L AQ + + V GL K L+ F
Sbjct: 274 HYQNIFGPLVKMESDYD----------KKLKEAQSEDGLL-----VRWDYGLNNKHLVSF 318
Query: 77 QSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSS---ITVAFDDIP 130
K GDV K D + L+ K +L SP G G V ++ ++ +T+
Sbjct: 319 NLHKIESGDV----KLAVGDEMRLR-YKGELRSPWEGVGYVIKIPNNQSDEVTLELRKTG 373
Query: 131 EE-----GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI--PVLFGEQKPTV 183
E L+ + + +Y RM+ A+ + V + +G I +L E + V
Sbjct: 374 NEKLVPTDLSHNFSADYVWKATSYDRMQLAMKTFA--VDDMSVSGYIFHTLLGHEVQLQV 431
Query: 184 LKKDIAFK---PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-R 239
+K ++ K P +L+ SQ AI KA+ K + ++ GPPGTGKT T II K
Sbjct: 432 MKTNLPKKWSAPGLPDLNPSQVGAI-KAVLQKPLSLIQGPPGTGKTVTSATIIYHLAKMS 490
Query: 240 GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLAS 299
G+++L CA SN+AVD + ER+ +++VRL +R + +ES++ S LA
Sbjct: 491 GNQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAKSR---EDVESSV---------SFLAL 538
Query: 300 DIRKEMKALNGKLLKTKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLT 355
+ M N +L+K +++ EL LS ++E+K +QL A D++ NADVV
Sbjct: 539 HEQVRMSEHNSELVKLS------QLKNELGELSSQDEKKYKQLTKIAERDILNNADVVCC 592
Query: 356 TLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEA 414
T GA +L F V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A
Sbjct: 593 TCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKA 652
Query: 415 EKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK---AHPSGVKR 471
K GL ++LFERL +L + L +QYRMH + + S Y+ ++ H + +++
Sbjct: 653 AKAGLNQSLFERLVNLKLSPIR--LNIQYRMHPCLSEFPSNMFYDGSLQNGVTHENRLRK 710
Query: 472 TSSTE------PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDI 525
P + ++ EE S +N EA R ++GV +DI
Sbjct: 711 DVDFPWPVGEMPMMFWSNLG---HEEISASGTSYLNRTEASNVEKAVTRFFKAGVKPADI 767
Query: 526 GIITPYAAQ--VVLLKILRS---KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEV 580
G+ITPY Q ++ + S K + K +EV++VD FQGREK+ I++S VRSN + +
Sbjct: 768 GVITPYEGQRSYIVTTMQNSGTYKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGI 827
Query: 581 GFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
GFLSD RR+NVA+TRA+ ++ + + +S L+ +F++ ++ G
Sbjct: 828 GFLSDPRRLNVALTRAKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEG 878
>gi|452820756|gb|EME27794.1| endonuclease [Galdieria sulphuraria]
Length = 712
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 249/458 (54%), Gaps = 39/458 (8%)
Query: 195 SNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAV 253
++ + SQ+ A AL + + ++ GPPGTGKT T+ +I+ V+ G + ILA A ++IA
Sbjct: 263 NDWNESQQTAWKNALE-RRLTLIQGPPGTGKTKTLAKILASLVQLGRTPILASAYTHIAT 321
Query: 254 DNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
DNI++ L + + +R+G PA + + + +LD+ +L D + + R+ +K +L
Sbjct: 322 DNILDELERYNIPAIRIGKPANIHRNLWKYSLDS-LLERDTRII--EKRENLKKAMERLA 378
Query: 314 KTKDKNT----RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS 369
+ K R+ K L L + E +A +++ +VL+T GA L N S
Sbjct: 379 QPKRGKAIGLAHRDYSKSLGQLKQTE----MIATKEILDKYPIVLSTCVGAGEEILKNIS 434
Query: 370 FDLVIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
F +V IDEA Q+ E I ++KG + ILAGDH QLPPT+ + EA + GL +LFERL
Sbjct: 435 FQVVAIDEATQSHEPGLLIPIIKGCEQLILAGDHYQLPPTILNPEAAESGLSVSLFERLV 494
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHP-----SGVKRTSSTEPTLLLID 483
G E +L QYRMH I + S+ Y+ + + P S + + + I
Sbjct: 495 R-SGVE-PYLLRTQYRMHPSIAAFPSQYFYHGLLHSAPCTQSISNYFPWPNPQTPIAFIP 552
Query: 484 IAGCDMEEKKDEEDSTM-NEGEAEVAMAHAKRLIQSGVHASD-----------IGIITPY 531
+ G EE E+ ++ N E++V + +++++ + A + IGIITPY
Sbjct: 553 VLG---EEWVTEQGTSYCNPQESQVVIETISQIVENWMTAQNSNHTLQQSFPTIGIITPY 609
Query: 532 AAQV--VLLKILR-SKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
A Q+ ++ ++ R + + L +EV TVDGFQGREK+ IIIS VRSN + +GFL D RR
Sbjct: 610 AGQMRDIMDRMDRETSTEWLSYVEVKTVDGFQGREKDIIIISTVRSNPSQSLGFLQDWRR 669
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHA 626
+NVA+TR+R ++ + T+S + KR +E+ H
Sbjct: 670 LNVAITRSRSGLIVIGNANTLSRNDHWKRWLEWISHHG 707
>gi|118388103|ref|XP_001027152.1| phage head-tail adaptor, putative family protein [Tetrahymena
thermophila]
gi|89308922|gb|EAS06910.1| phage head-tail adaptor, putative family protein [Tetrahymena
thermophila SB210]
Length = 1112
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 154/457 (33%), Positives = 241/457 (52%), Gaps = 40/457 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-------RGSKILACAAS 249
L++ Q +A+ KAL + ++ GPPGTGKT T II VK RG ++L CA S
Sbjct: 442 LNYYQVEAVKKALQQP-LCLIQGPPGTGKTFTSTAIIYHLVKNIQKSGQRG-QVLVCAPS 499
Query: 250 NIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALN 309
NI VD + ER+ +++VR+ +R +++ S+++ L SL D KEM+
Sbjct: 500 NIVVDQLAERIHQAGIKVVRMCSRSR---EMISSSVEFLTLHNQVRSLDFDEYKEMQ--- 553
Query: 310 GKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS 369
KLL+ K+ + E + S KRQ ++++NA+V+ +T + +L +
Sbjct: 554 -KLLELKEDQGELDHDDEDKYYS---LKRQ--GEKEILRNAEVICSTCISSADPRLKDIR 607
Query: 370 FDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
F V+IDEA QA+E C + +LKG++ IL GDH QL P V + K GL ++LFER+
Sbjct: 608 FKHVLIDEATQAIEPECLLPMLKGAKHVILVGDHRQLGPVVTCRDTAKAGLNKSLFERMV 667
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT--------SSTEPTLL 480
+ + L VQYRMH + + S Y ++ + R + +P +
Sbjct: 668 SMGIRPIR--LQVQYRMHPDLSIFPSNTFYEGTLQNGVTFNDRQFHGEFPWPNKNKPLMF 725
Query: 481 LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKI 540
L C +EE S +N E + RLI++ V IGIITPY Q +
Sbjct: 726 L---NSCGVEEISSSGTSYLNRQETALIEDIVFRLIKAKVKPEQIGIITPYKGQRFYIGD 782
Query: 541 LRSKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
SK+ +L + +E+++VDGFQGREK+ IIIS VRSN + +GFL+D RR+NVA+TR
Sbjct: 783 YLSKNGRLNHVLYRQIEIASVDGFQGREKDYIIISCVRSNECQGIGFLTDPRRLNVAITR 842
Query: 596 ARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
AR +V + + ++ D L+ + +E+ + G+
Sbjct: 843 ARYGLIIVGNAKVLARDNLWNNLLNHMKENKVLVDGT 879
>gi|400597184|gb|EJP64919.1| Regulator of nonsense transcripts 1 [Beauveria bassiana ARSEF 2860]
Length = 1083
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 195/658 (29%), Positives = 310/658 (47%), Gaps = 96/658 (14%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
+ ++ PL+ +E + + + L AQ + NL V+ GL K L F
Sbjct: 273 HYQNIFGPLVKMESDYD----------KKLKEAQSED----NLT-VEWSQGLNNKHLATF 317
Query: 77 QSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEG 133
K G+V K D ++L+ N +L P G G V ++ +S ++ + G
Sbjct: 318 NLRKIESGEV----KLAVGDEMLLRYN-GELREPWQGVGYVMKIPNSQSDEVCLELRKNG 372
Query: 134 --------LNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK 185
L+ + + +Y RM+ A+ + V + +G I T+L
Sbjct: 373 NDRSVPTDLSHNFSADYVWKATSYDRMQLAMKTFA--VDDMSVSGFI-------FHTLLG 423
Query: 186 KDIAFKPFNSNL------------DHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII 233
D+ +P SNL + SQ DAI L K + ++ GPPGTGKT T II
Sbjct: 424 HDVQLQPMKSNLPKKWSAPGLPDLNQSQVDAIRSVLQ-KPLSLIQGPPGTGKTVTSATII 482
Query: 234 LQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRG 292
K G+++L CA SN+AVD + ER+ +++VRL +R + +ES++
Sbjct: 483 YHLSKISGNQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSR---EDVESSV------- 532
Query: 293 DNSSLASDIRKEMKALNGKLLK-TKDKNTRREIQKELRTLSKEERKRQQL---AVTDVIK 348
S LA + M N + K ++ KN E+ S++E+K +QL A +++
Sbjct: 533 --SFLALHEQVRMSEHNSEFAKLSQLKNEAGELS------SQDEKKFRQLTKAAEREILN 584
Query: 349 NADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPP 407
NADVV T GA +L F V+IDE+ Q+ E C I L+ G + +L GDH QL P
Sbjct: 585 NADVVCCTCVGAGDPRLSKLKFRSVLIDESTQSAEPECIIPLMLGCKQVVLVGDHKQLGP 644
Query: 408 TVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS 467
+ + +A K GL ++LFERL L + +L QYRMH + + S Y+ ++ +
Sbjct: 645 VIMNKKAAKAGLSQSLFERLMQLRLQPI--LLNTQYRMHPCLSEFPSNMFYDGSLQNGVT 702
Query: 468 GVKRTS---------STEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQS 518
+R + P + +I EE S +N EA R ++
Sbjct: 703 QEQRIRKDVDFPWPVAEMPMMFWSNIGN---EEISTSGTSYLNRTEASNVEKIVTRFFKA 759
Query: 519 GVHASDIGIITPYAAQ-----VVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVR 573
GV S+IG+ITPY Q + SK + K++EV++VD FQGREK+ I++S VR
Sbjct: 760 GVKPSEIGVITPYEGQRSYIVTTMQNAGTSKKEYYKSVEVASVDAFQGREKDFIVLSCVR 819
Query: 574 SNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
SN + +GFLSD RR+NVA+TRA+ ++ + +S L+ +F + ++ G
Sbjct: 820 SNENQGIGFLSDPRRLNVALTRAKYGVVILGNPRVLSKHELWYNLLTHFRDRRCFVEG 877
>gi|324518959|gb|ADY47250.1| DNA-binding protein SMUBP-2, partial [Ascaris suum]
Length = 377
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 134/341 (39%), Positives = 193/341 (56%), Gaps = 33/341 (9%)
Query: 299 SDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLT 358
SD+ + + LN + T D + R+I +E L RK V+ V+L T++
Sbjct: 20 SDLLRLYEQLNESIRLTGDSSITRKISQEATRLRDSMRK-------SVVVEKQVILCTVS 72
Query: 359 GAVSRKLDNTSF--DLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEK 416
L F D+VI+DEAAQA+E A W+ LL+ RC+LAGDH QLP + S EA
Sbjct: 73 SGSLHTLRGLGFFPDVVIVDEAAQAMECATWVPLLQAPRCVLAGDHCQLPTVLHSSEAIS 132
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS--GVKRTSS 474
+GLG +L E L +G V L+VQ+RM+E IM WS+ Y SK++AH S G+ +
Sbjct: 133 QGLGTSLMETLDKEFGSVVKHFLSVQHRMNEKIMRWSADYFYESKLQAHRSVAGISLSDI 192
Query: 475 T---------EPTLLLIDIA------GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG 519
+ EP LL+ID G + ++ + S N GEAE+ A+ + L++ G
Sbjct: 193 SAIDGSDLMNEP-LLMIDTHSVSRQRGLSVSVERIHQQSYRNHGEAEIVCAYVQFLMRKG 251
Query: 520 VHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKE 579
V D+G+I+PY AQV LL+ L V+TVDGFQG+++E I++S+VR+N +
Sbjct: 252 VRQCDVGVISPYFAQVELLR------KTLGEEIVNTVDGFQGQQREVIVMSLVRNNYEGR 305
Query: 580 VGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
+GFLSD RR+NVAVTRARRQ LV + + L+ L+E
Sbjct: 306 IGFLSDARRLNVAVTRARRQFLLVGSSSMMRHAEHLRSLLE 346
>gi|71005206|ref|XP_757269.1| hypothetical protein UM01122.1 [Ustilago maydis 521]
gi|46096405|gb|EAK81638.1| hypothetical protein UM01122.1 [Ustilago maydis 521]
Length = 847
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 157/461 (34%), Positives = 235/461 (50%), Gaps = 99/461 (21%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEFQSTKGDVL----PAHKFGTHDVVVLKPNKAD-- 103
+K G +L+L + G+ K L+E + + P H F + D+ + N AD
Sbjct: 51 EKHGLALLSLGVASIRIGVGAKLLVELERPSAHHMSPKFPPHTFRSGDLAAILDNGADPQ 110
Query: 104 -LGSPALGQGVVYRLKDSSITVAFDD-----IPEEG----------------------LN 135
L QGVVY++ D+ I +A D +P++ L+
Sbjct: 111 ATNDTCLLQGVVYKVSDARIVLALSDDKKRGVPKDNTQIGQNKRDARRGENDKVSGNNLD 170
Query: 136 SP--LRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGL---------------------- 171
P +RL K+ANE T+ R++ L +L+K + +A L
Sbjct: 171 LPERIRLVKVANESTFDRLELTLDKLAKALDVPLSAPLDSNADTSAEETEATQTSSSSTT 230
Query: 172 -----IPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKT 226
LFG +PT + D+ PFN NL+ +Q +AI ALS+ + ++HGPPGTGKT
Sbjct: 231 SATSLTRSLFGLLEPTWHETDLPLPPFNPNLNDTQLNAIRHALSANHFSLIHGPPGTGKT 290
Query: 227 TTVVEIILQ-------EVKRGS--KILACAASNIAVDNIVERLV---PHR-------VRL 267
T +VE+I+Q V G+ ++L C ASN+AVDNI+ERLV HR + +
Sbjct: 291 TAIVELIMQIVASNFGAVDDGAPVRVLVCGASNLAVDNILERLVGVPEHREVFKKKGIGV 350
Query: 268 VRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK----DKNT--- 320
R+GHPAR++ + + LDAQ + + L DI KE++++ +L T +K+T
Sbjct: 351 TRIGHPARVVANLQKFTLDAQCTQSSEAQLVKDISKEIESIMSELKPTAAPAGNKSTRGK 410
Query: 321 -------RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLV 373
RR+ +E+R L KE R+R + V+ A VVL T A ++L + +D V
Sbjct: 411 PKIRGHDRRKRWEEVRELRKEYRRRDRQVTRSVLDRAQVVLATCHTAGGKQLAHRQYDWV 470
Query: 374 IIDEAAQALEIACWIALLK---GSRCILAGDHLQLPPTVQS 411
IIDEA QALE+ACWI +LK G+R +LAGDHLQLPPTV++
Sbjct: 471 IIDEACQALEVACWIPILKAREGARLVLAGDHLQLPPTVKA 511
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 140/249 (56%), Gaps = 39/249 (15%)
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS-------GV 469
+ L RTLF RL LYG + S+L++QYRM+ IM++ + +LY SK+ AH S +
Sbjct: 590 RSLERTLFSRLLGLYGPGIKSLLSIQYRMNTEIMSFPNTELYESKLSAHASCANIWVCDL 649
Query: 470 KRTSSTE----------PTLLLIDIAGCDMEEKKDEE-------DSTMNEGEAEVAMAHA 512
+ S+ + ++ D +GC+ E DS N E + + H
Sbjct: 650 ENVSTCDGLDEDEQELYAPVVFYDTSGCEFYESSPAPQESVMLTDSKSNMHEVGLIIQHL 709
Query: 513 KRLIQSGVHASDIGIITPYAAQVVLL-KILR---------SKDDKLKNMEVSTVDGFQGR 562
++L GVHA + I+TPY+AQV LL ++R S + +E+ T+D QGR
Sbjct: 710 EQLFARGVHARQVTILTPYSAQVSLLHSMIRLHRFSGRIASAVVNAEEIELGTIDSMQGR 769
Query: 563 EKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS-----DGFLKR 617
EK+ ++IS+VRSN++++VGFL+ ++R+NVA+TRA+RQ LV D +T+S D FL
Sbjct: 770 EKDVVLISLVRSNAEQQVGFLAQKKRLNVAITRAKRQLVLVGDADTISGAKDLPDSFLPN 829
Query: 618 LIEYFEEHA 626
+ + EE+A
Sbjct: 830 YMRWLEENA 838
>gi|145499757|ref|XP_001435863.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402999|emb|CAK68466.1| unnamed protein product [Paramecium tetraurelia]
Length = 928
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 153/457 (33%), Positives = 240/457 (52%), Gaps = 38/457 (8%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-------RGSKILACAA 248
+L+ Q DA+ KAL S + ++ GPPGTGKT T I+ Q VK RG +IL CA
Sbjct: 367 DLNVYQADAVKKALKSP-LSLIQGPPGTGKTVTSATIVHQLVKALEKQKQRG-QILVCAP 424
Query: 249 SNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKAL 308
SNI VD + E++ V++VRL R + + + ++ L SL +++
Sbjct: 425 SNIVVDQLAEKINKTGVKVVRLCSKTR---ESVSTTIEFLTLHNQVRSLDIPQYHQLQMF 481
Query: 309 NGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNT 368
+L+ + + +++ Q +R + E+ ++I+ ADV+ TT G+ ++L +
Sbjct: 482 Y-ELMDQQGELDQKDEQVFIRMRDEAEK--------EIIEQADVICTTCIGSADKRLKDM 532
Query: 369 SFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERL 427
F V+IDEA QA+E C + ++KG++ IL GDH QL P VQS EA GL R+LFERL
Sbjct: 533 RFPFVLIDEATQAIEPECLLPMIKGAQHVILVGDHRQLGPVVQSREAASVGLDRSLFERL 592
Query: 428 ADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS-------TEPTLL 480
L V L VQYRMH + + S Y ++ + RT S + ++
Sbjct: 593 VQLGIRPVR--LQVQYRMHPELTVFPSNTFYEGTLQNGVTISDRTHSGNFPWPNKQKPMI 650
Query: 481 LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKI 540
I++ G E+ S +N EA L Q+ V + IGIITPY Q +
Sbjct: 651 FINVQG--QEQLSASGTSYLNTQEAVAVEQAVYYLYQNTVKLNKIGIITPYKGQRTYIIS 708
Query: 541 LRSKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
++ +L +++EV++VDGFQGREK+ IIIS VRSN + +GFL++ RR+NV +TR
Sbjct: 709 YLQRNGQLPYNQYRDIEVASVDGFQGREKDFIIISCVRSNDTQGIGFLTNPRRLNVTITR 768
Query: 596 ARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
AR ++ + + D ++ +F++ + GS
Sbjct: 769 ARFGLIIIGNARVLCKDNLWNNMLNHFKDLDLLMEGS 805
>gi|389746349|gb|EIM87529.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 815
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 161/469 (34%), Positives = 238/469 (50%), Gaps = 77/469 (16%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
L F+ L+ E+EAEI + ++ ++KG ++ + GL GKTL+
Sbjct: 9 LSAFIDRHRVLLAKEREAEIERTSLLLSNCGPKLLEQKGLALIGVGVSSIGVGLGGKTLV 68
Query: 75 EFQSTKG----DVLPAHKFGTHDVVVLKPNKADLGSPALG----------------QGVV 114
E + + P H D+ ++ N A G+ G +GVV
Sbjct: 69 ELERPAAYHTNPIFPPHTLRPGDLARIEENVAASGASKKGTKAKKSAVESKTSQFVEGVV 128
Query: 115 YRLKDSSITVAFD---------DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSK---- 161
Y++ D+ I +A D D+PE R+ KLAN VTY RM+ L QL K
Sbjct: 129 YKVSDTRIAIAVDASDSSSDDLDLPER-----CRIVKLANSVTYDRMEKTLDQLEKIAIP 183
Query: 162 ---------GVQNGPA-AGLIPVLFGEQKPT--VLKKDIAFKPFNSNLDHSQKDAISKAL 209
G +N P L VL G +P+ KD+ F F+S+L+ SQK+AI AL
Sbjct: 184 TSATGTHSGGGKNQPELTKLTEVLLGMSRPSDRAPVKDLKF--FDSSLNDSQKEAIKFAL 241
Query: 210 SSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS------KILACAASNIAVDNIVERLVP- 262
S + +HGPPGTGKT T++EII Q S ++L C ASN++VDNI+ERL+
Sbjct: 242 ESPELACIHGPPGTGKTHTLIEIIRQLTSTSSYNPKPKRLLVCGASNLSVDNILERLLAL 301
Query: 263 -------HRVRLVRLGHPARLLPQ---VLESALDAQVLRGDNSSLASDIRKEMKALNGKL 312
++++ R+GHPAR++ VLE+ L+ + R D ++LA D++ E++A L
Sbjct: 302 PTPENKFEKLKVTRVGHPARVMANNEGVLEATLEVKAGRSDQAALAKDVKNELQAAMDTL 361
Query: 313 LKTKDKNT--------RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRK 364
R+++ +E++ L KE R+R+ V V+ + VVL T A R+
Sbjct: 362 SGKGKGAKGKGPRGLERKKMWEEVKALRKEYRQREGGVVQTVLSESQVVLATCHSAGGRQ 421
Query: 365 LDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVE 413
L N FD+VIIDEA QALE CWI + K S+ ILAGD QLPPT+ S++
Sbjct: 422 LWNQKFDVVIIDEATQALEAVCWIPIFKASKLILAGDPKQLPPTILSLD 470
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 105/238 (44%), Positives = 141/238 (59%), Gaps = 31/238 (13%)
Query: 419 LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------- 467
L T+FERL LYG + MLTVQYRMHE I + S+ +YNSK++AHPS
Sbjct: 573 LETTMFERLEKLYGPGIKRMLTVQYRMHEQIAQFPSQVMYNSKLQAHPSVASHLLCDLSN 632
Query: 468 ----GVKRTSSTEPTL---------LLIDIAGCDMEEKKD---EEDSTMNEGEAEVAMAH 511
G + E + + D AGC+ E+ + +E S NE EA V
Sbjct: 633 VNTDGDDNSKDEEDNVDKEVLRTPVVFFDTAGCEYFERTEGDGDEGSKCNENEATVVRKW 692
Query: 512 AKRLIQSGVHASDIGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIIS 570
++L+ G+ S I IITPY AQV LL ILR ++E+ TVDG QGREKEA+IIS
Sbjct: 693 VEQLVDVGILPSQIAIITPYQAQVTLLTSILRPTYGT--DLEIGTVDGMQGREKEAVIIS 750
Query: 571 MVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE 627
+VRSN K+EVGFL ++RR+NVA+TRARR C+V D+ TV G +LK+ + + E +A+
Sbjct: 751 LVRSNEKREVGFLKEKRRLNVAMTRARRHLCIVGDSSTVQHGGSYLKKWLAWLEANAD 808
>gi|164659902|ref|XP_001731075.1| hypothetical protein MGL_2074 [Malassezia globosa CBS 7966]
gi|159104973|gb|EDP43861.1| hypothetical protein MGL_2074 [Malassezia globosa CBS 7966]
Length = 1019
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 181/540 (33%), Positives = 281/540 (52%), Gaps = 51/540 (9%)
Query: 120 SSITVAFDDIPEEGLNSPLR------LEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIP 173
SS+ VA + +P+ L+ PL LE + +TY RMK+AL + S+G + + L
Sbjct: 363 SSMEVACE-VPKH-LSPPLECTTNYMLEFVWIGITYSRMKNALSRFSRG-RPCMSTYLQK 419
Query: 174 VLFG-EQKPTVLKKDIAFKPFNSNL---DHSQKDAISKALSSKNVFMLHGPPGTGKTTTV 229
VL G K L+ + + S L ++SQ A+ L+S + ++ GPPGTGKT T
Sbjct: 420 VLLGIPSKAIPLQVQMPRRLHVSGLPELNYSQLTALKTVLTSP-LSLIQGPPGTGKTVTS 478
Query: 230 VEII--LQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPAR--LLPQVLESAL 285
+I L ++KRG KIL CA SN+AVD + E+L +++VRL R + QV AL
Sbjct: 479 ASLIYHLVQMKRG-KILVCAPSNVAVDQLTEKLHRTGLKVVRLVSRMRETISSQVRFLAL 537
Query: 286 DAQVLR-GDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVT 344
QV + +N+ L+ I E K NG+L +++ R ++ + R
Sbjct: 538 HEQVAQVEENTELSHLI--EQKRNNGELSTMEERRYRSQVFQRER--------------- 580
Query: 345 DVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHL 403
+++ ADV+ TT + + R+L + F V+IDEA QA+E C I +++G R +L GDH
Sbjct: 581 EILDAADVICTTCSSSADRRLHSYEFQTVLIDEATQAVEPECLIPIVRGCRQLVLVGDHK 640
Query: 404 QLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK 463
QL P V + + G+ +LFERL L G + L VQYRMH + + S Y+ ++
Sbjct: 641 QLGPVVLNRKVADAGMNLSLFERLV-LLGVK-PRRLEVQYRMHPALSEFPSNMFYDGMLQ 698
Query: 464 AHPSGVKR------TSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQ 517
S +R P + ++ EE S +N EA L++
Sbjct: 699 NGVSAHERLRRNVAIPWPVPNMPMMFYQNLGQEEISASGTSYLNRTEASSVEKLVTTLLK 758
Query: 518 SGVHASDIGIITPYAAQ----VVLLKILRSK-DDKLKNMEVSTVDGFQGREKEAIIISMV 572
+GV A IG++TPY Q + +++ S D +N+EV++VD FQGREK+ II+S V
Sbjct: 759 AGVAAEHIGVVTPYEGQRNFVINYMQLHGSMMKDAYRNVEVASVDAFQGREKDYIIVSCV 818
Query: 573 RSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
RSNS +GFLSD RR+NVA+TRAR L+ + + + L+ +F++ + G+
Sbjct: 819 RSNSSLGIGFLSDPRRLNVALTRARFGLILIGNPRILCKNPLWYHLLVHFKDRNLLVEGA 878
>gi|409074520|gb|EKM74916.1| hypothetical protein AGABI1DRAFT_123471 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 937
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 158/502 (31%), Positives = 252/502 (50%), Gaps = 86/502 (17%)
Query: 181 PTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQ---EV 237
P V++ D FK +L+ SQ A++ + K + ++ GPPGTGKT T+VE I
Sbjct: 377 PLVMEGDPDFK----HLNKSQIKAMATMIG-KRISLVQGPPGTGKTKTIVETIKLLKLHF 431
Query: 238 KRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRG----- 292
+ IL C +N+AVDN++E ++ +R+G +R+ + E +LD +L+
Sbjct: 432 EVSHPILVCTYTNVAVDNLLEGFAKAGLKPLRVGFGSRIRASLQEYSLDHLLLKHPLQPL 491
Query: 293 -------------DNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKR- 338
+ S L + IR +K + GK T + ++ + + ++R+R
Sbjct: 492 LLETIALLDKMEEEISQLGALIRDTLKKIEGK---TPSAAMEQRVRNMSQAMGMKDRRRN 548
Query: 339 ---------QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIA 389
QQ + D++K+ADVV +T + S L+ F +V +DEA+ + E A I
Sbjct: 549 ELRAKKYGLQQEMLHDIVKSADVVCSTCITSASSALNVADFPVVFVDEASMSTEPATLIP 608
Query: 390 LLKGSRCI-LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEH 448
++KGSR + L GDH QLPP + S EA +GL +LFERL + G + ML +QYRMH
Sbjct: 609 IMKGSRHLALIGDHKQLPPVIVSQEARAQGLAVSLFERLTE-EGIVPSVMLDIQYRMHPR 667
Query: 449 IMNWSSKQLYNSKIK--------------AHPSGVKR---------TSSTEPTLLLIDIA 485
I ++ S + YNS I+ P + S + P+++ +D
Sbjct: 668 ISHFPSLEFYNSSIQDGTTDKDGNVVVGLEPPMSLTHLLQDGNHEGQSRSRPSVIFLDHF 727
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLI--QSGVHASDIGIITPYAAQVVLLKILRS 543
G + + S +N EA++ ++ + L+ + DIGII PY AQ+ LL L +
Sbjct: 728 GYETMSGR----SRVNHHEAQIVVSLVEDLLLQNPQLRGQDIGIIAPYVAQINLLNRLLT 783
Query: 544 KDDK----------------LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
D + + ++EV TVDGF+GREKE I+ S VR+N +GFL+DRR
Sbjct: 784 TDVRNGERFREVLGNQRYRDMSDVEVKTVDGFEGREKEVIVFSTVRNNDSGRIGFLADRR 843
Query: 588 RMNVAVTRARRQCCLVCDTETV 609
R+NV +TRA+R +V T+
Sbjct: 844 RLNVGLTRAKRGLFVVGGMRTI 865
>gi|393235485|gb|EJD43040.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 887
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 172/487 (35%), Positives = 251/487 (51%), Gaps = 52/487 (10%)
Query: 176 FGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQ 235
+ P VL D P NS +Q AI+ L+S+ V ++ GPPGTGKT T+VE I +
Sbjct: 402 YSRPDPIVLPGDPEL-PLNS----TQVRAIALMLASR-VSLVQGPPGTGKTKTIVETI-R 454
Query: 236 EVKR----GSKILACAASNIAVDNIVERLVPHRVRLVRLGH----PARLLPQVLESALDA 287
+KR IL C +NIAVDN+VE L +R +R G PA L + DA
Sbjct: 455 LLKRHFHVPYPILVCTYTNIAVDNLVEGLGKAGLRPLRFGSSGTAPAGGAQYTLRARRDA 514
Query: 288 QVLRGDNSSLASDIRKEMKALNGKLLKTKDKN----TRREIQKELRTLSKEERKRQQLAV 343
VL L I + + L G L + N RRE KE+ L K ++L +
Sbjct: 515 HVLGPHLDKLLGRIERLNRDLRG-LRAAEPPNPAAIARRE--KEVLGLRGAVFKLERLLM 571
Query: 344 TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCI-LAGDH 402
++++++DVV TT A S L F +V +DEA+ + E A I L++G + L GDH
Sbjct: 572 QEIVEDSDVVCTTCISAGSAALHVADFPIVFLDEASMSTEPASLIPLMRGCEHVALIGDH 631
Query: 403 LQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLY---- 458
QLPP + S EAE+ GLGR+LFERL + G+ + ML VQYRMH + + + + Y
Sbjct: 632 KQLPPVITSDEAERGGLGRSLFERLTE-EGEVPSIMLDVQYRMHPDLSRFPASEFYGRSL 690
Query: 459 -NSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEE----DSTMNEGEAEVAMAHAK 513
+ + AH V + L AG + + E S +N GEA + +
Sbjct: 691 LDGTVSAH-GEVAPALRPPASRFLQRGAGVVFLDHRHGEARRDRSRVNVGEARLVCDVVE 749
Query: 514 RLI--QSGVHASDIGIITPYAAQVVLLKILRSKD--------------DKLKNMEVSTVD 557
L+ + +IG+I PYAAQ+ LL+ + ++ D+++ +EV TVD
Sbjct: 750 DLLLQNEDLVGREIGVIAPYAAQISLLERVLGENRERWVDALGSERRADEVEAIEVKTVD 809
Query: 558 GFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSD--GFL 615
GF+GREKE II S VR+N ++GFL+DRRR+NV +TRA+R + T+ ++ G
Sbjct: 810 GFEGREKEVIIFSTVRNNGAGQIGFLADRRRLNVGLTRAKRGLFVAGSVRTLGTEKSGVW 869
Query: 616 KRLIEYF 622
R +EY
Sbjct: 870 ARYVEYL 876
>gi|145350386|ref|XP_001419588.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579820|gb|ABO97881.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 797
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 159/546 (29%), Positives = 275/546 (50%), Gaps = 43/546 (7%)
Query: 110 GQGVVYRL---KDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNG 166
GQGVV + ++ + + D P E N ++ L +Y R + AL ++ +
Sbjct: 263 GQGVVIKFTAQEEVGVEMYGMDAPVEYTNG-YSVDFLWKGTSYERAQQALESFAEDETSV 321
Query: 167 PAAGLIPVLFGEQKPTVLKKDIAFK---PFNSNLDHSQKDAISKALSSKNVFMLHGPPGT 223
+ ++ + + L D K P L+ SQ DA+ K + + + ++ GPPGT
Sbjct: 322 SGYIYLKLMGKDPEDMFLSGDFPKKLTAPGLPELNQSQHDAV-KTVLQRPLSLVQGPPGT 380
Query: 224 GKTTTVVEIILQEVKRGS-KILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLE 282
GKT T ++ KRG+ +++ CA SN+AVD++ E++ +++VR+ +R + L
Sbjct: 381 GKTVTSATLVYHLAKRGNGQVIVCAPSNVAVDHLAEKIEKTGLKVVRISSRSR---EHLV 437
Query: 283 SALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLS----KEERKR 338
S+++ L +++ K + L ++++ EL LS K+ R
Sbjct: 438 SSVEHLTLHYQVANIGGSTHKAFQKL-------------QQLKNELGELSAGDEKKYRNA 484
Query: 339 QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CI 397
Q+ ++++NADV+ TT GA +L N F +V+IDE+ QA E C I ++ G++ +
Sbjct: 485 QKKLEREILENADVICTTAVGAGDPRLANFRFRMVLIDESTQATEPECLIPIVMGAKQVV 544
Query: 398 LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQL 457
+ GDH QL P V +A GL ++LFERL L + L +QYRMH + + S
Sbjct: 545 MVGDHKQLGPVVTCKQAYAAGLAQSLFERLIALGIQPIR--LQIQYRMHPCLSEFPSNTF 602
Query: 458 YNSKIKAHPSGVKRTSS------TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAH 511
Y+ ++ S ++RT S P+ ++ + EE S +N EA
Sbjct: 603 YDGTLQNGVSAIERTLSHIDFPWPVPSKPMMFWSQTGQEEMSASGTSFLNRAEASAVEKC 662
Query: 512 AKRLIQSGVHASDIGIITPYAAQ--VVLLKILRS---KDDKLKNMEVSTVDGFQGREKEA 566
L+ +GV IG++TPY Q V+ + R K+++V++VD FQG+EK+
Sbjct: 663 VTHLLNAGVSPEQIGVVTPYEGQRAYVVQHMTRVGVLHPQLYKDIQVASVDSFQGKEKDF 722
Query: 567 IIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHA 626
II++ VRSN K +GFLSD RR+NVA+TRAR ++ + + ++ ++ +F E+
Sbjct: 723 IIMTCVRSNEKSGIGFLSDPRRLNVAITRARSGLIVIGNPKVLNKQHLFHEMLTHFRENG 782
Query: 627 EYLSGS 632
+ G+
Sbjct: 783 CLVEGT 788
>gi|296471357|tpg|DAA13472.1| TPA: immunoglobulin mu binding protein 2 [Bos taurus]
Length = 334
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 187/302 (61%), Gaps = 13/302 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ ++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASTPVESFVTKQLELLELERDAEVEERRSWQENVSLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ + + VLP++ F + D+V L L + G++ R+ ++TVAFD
Sbjct: 62 RLLITLEPRRCVSAAVLPSNSFTSGDIVGLYDESGQLAT-----GILTRITQKAVTVAFD 116
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ RL KLAN+VTY+R+K ALI L K GPA+ LI VLFG P+
Sbjct: 117 ESHDSQLSLDQEHSYRLLKLANDVTYKRLKKALISLKKH-HAGPASSLIEVLFGASDPSP 175
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ N LD SQ++A+ ALS K + ++HGPPGTGKTTTVVEIILQ VKRGSK+
Sbjct: 176 PSEMPPLTFCNPALDASQQEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKRGSKV 235
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SN+AVDN+VERL + R++RLGHPARLL + + +LDA + R D++ + +DIR+
Sbjct: 236 LCCAPSNVAVDNLVERLAQWKQRILRLGHPARLLDSIQQHSLDAVLARSDSARIVADIRR 295
Query: 304 EM 305
++
Sbjct: 296 DI 297
>gi|126010667|gb|AAI33634.1| IGHMBP2 protein [Bos taurus]
Length = 334
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 187/302 (61%), Gaps = 13/302 (4%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMG 70
++ ++ FV+ L++LE++AE+ + + +L Q +G +L L+ +TGL G
Sbjct: 2 ASTPVESFVTKQLELLELERDAEVEERRSWQENVSLKELQSRGVCLLKLQVSSQRTGLYG 61
Query: 71 KTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L+ + + VLP++ F + D+V L L + G++ R+ ++TVAFD
Sbjct: 62 RLLITLEPRRCVSAAVLPSNSFTSGDIVGLYDESGQLAT-----GILTRITQKAVTVAFD 116
Query: 128 DIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV 183
+ + L+ RL KLAN+VTY+R+K ALI L K GPA+ LI VLFG P+
Sbjct: 117 ESHDSQLSLDQEHSYRLLKLANDVTYKRLKKALISLKKH-HAGPASSLIEVLFGASDPSP 175
Query: 184 LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKI 243
+ N LD SQ++A+ ALS K + ++HGPPGTGKTTTVVEIILQ VKRGSK+
Sbjct: 176 PSEMPPLTFCNPALDASQQEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKRGSKV 235
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK 303
L CA SN+AVDN+VERL + R++RLGHPARLL + + +LDA + R D++ + +DIR+
Sbjct: 236 LCCAPSNVAVDNLVERLAQWKQRILRLGHPARLLDSIQQHSLDAVLARSDSARIVADIRR 295
Query: 304 EM 305
++
Sbjct: 296 DI 297
>gi|426193612|gb|EKV43545.1| hypothetical protein AGABI2DRAFT_210326 [Agaricus bisporus var.
bisporus H97]
Length = 927
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 158/499 (31%), Positives = 255/499 (51%), Gaps = 80/499 (16%)
Query: 181 PTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQ---EV 237
P V++ D FK +L+ SQ A++ + K + ++ GPPGTGKT T+VE I
Sbjct: 367 PLVMEGDPDFK----HLNKSQIKAMATMIG-KRISLVQGPPGTGKTKTIVETIKLLKLHF 421
Query: 238 KRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRG----- 292
+ IL C +N+AVDN++E ++ +R+G +R+ + E +LD +L+
Sbjct: 422 EVSHPILVCTYTNVAVDNLLEGFAKAGLKPLRVGFGSRIRASLQEYSLDHLLLKHPLQPL 481
Query: 293 --DNSSLASDIRKEMKALNG----KLLKTKDKNTRREIQKELRTLSK----EERKR---- 338
+ +L + +E+ L L K + K +++ +R +S+ ++R+R
Sbjct: 482 LLETIALLDKMEEEIGQLGALIRDTLKKIEGKTPSAAMEQRVRNMSQAMGMKDRRRNELR 541
Query: 339 ------QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLK 392
QQ + D++K+ADVV +T + S L+ F +V +DEA+ + E A I ++K
Sbjct: 542 AKKYGLQQEMLHDIVKSADVVCSTCITSASSALNVADFPVVFVDEASMSTEPATLIPIMK 601
Query: 393 GSRCI-LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN 451
GSR + L GDH QLPP + S EA +GL +LFERL + G + ML +QYRMH I +
Sbjct: 602 GSRHLALIGDHKQLPPVIVSQEARAQGLAVSLFERLTE-EGIVPSVMLDIQYRMHPRISH 660
Query: 452 WSSKQLYNSKIK--------------AHPSGVKR---------TSSTEPTLLLIDIAGCD 488
+ S + YNS I+ P + S + P+++ +D G +
Sbjct: 661 FPSLEFYNSSIQDGTTDKDGNVVVGLEPPMSLTHLLQDGNHEGQSRSRPSVIFLDHFGYE 720
Query: 489 MEEKKDEEDSTMNEGEAEVAMAHAKRLI--QSGVHASDIGIITPYAAQVVLLKILRSKDD 546
+ S +N EA++ ++ + L+ + DIGII PY AQ+ LL L + D
Sbjct: 721 TMSGR----SRVNHHEAQIVVSLVEDLLLQNPQLRGQDIGIIAPYVAQINLLNRLLTTDV 776
Query: 547 K----------------LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
+ + ++EV TVDGF+GREKE I+ S VR+N +GFL+DRRR+N
Sbjct: 777 RNGERFREVLGNQRYRDMSDVEVKTVDGFEGREKEVIVFSTVRNNDSGRIGFLADRRRLN 836
Query: 591 VAVTRARRQCCLVCDTETV 609
V +TRA+R +V T+
Sbjct: 837 VGLTRAKRGLFVVGGMRTI 855
>gi|322706853|gb|EFY98432.1| Regulator of nonsense transcripts 1 [Metarhizium anisopliae ARSEF
23]
Length = 1083
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 196/658 (29%), Positives = 315/658 (47%), Gaps = 96/658 (14%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
+ ++ PL+ +E + + + L AQ + I V GL K L+ F
Sbjct: 275 HYQNIFGPLVKMESDYD----------KKLKEAQSEDGLI-----VRWDYGLNNKHLVSF 319
Query: 77 QSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS-SITVAF------ 126
K GDV K D + L+ N +L P G G V ++ +S S V
Sbjct: 320 NLHKIESGDV----KLAVGDEMRLRYN-GELREPWEGVGYVIKIPNSQSDEVGLELRKTG 374
Query: 127 -DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK 185
D + L+ + + +Y RM+ A+ + V + +G I T+L
Sbjct: 375 NDKLVPTDLSHNFSADYVWKATSYDRMQLAMKTFA--VDDMSVSGYI-------FHTLLG 425
Query: 186 KDIAFKPFNS------------NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII 233
++ +P S L+ SQ DAI K++ K + ++ GPPGTGKT T II
Sbjct: 426 HEVQLQPVQSRLPRKWSVPGLPELNQSQIDAI-KSVLQKPLSLIQGPPGTGKTVTSATII 484
Query: 234 LQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRG 292
K G+++L CA SN+AVD + ER+ +++VRL +R + +ES++
Sbjct: 485 YHLAKMSGNQVLVCAPSNVAVDQLCERIHNTNLKVVRLTAKSR---EDVESSV------- 534
Query: 293 DNSSLASDIRKEMKALNGKLLK-TKDKNTRREIQKELRTLSKEERKRQQL---AVTDVIK 348
S LA + + N +L+K ++ KN E+ S++E+K +QL A +++
Sbjct: 535 --SFLALHEQVRLSEHNSELVKLSQLKNDVGELS------SQDEKKFKQLTKAAEREILN 586
Query: 349 NADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPP 407
NADVV T GA +L F V+IDE+ Q+ E C I L+ G + +L GDH QL P
Sbjct: 587 NADVVCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGP 646
Query: 408 TVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK---A 464
+ + +A K GL ++LFERL L + LT QYRMH + + S Y+ ++
Sbjct: 647 VIMNKKAAKAGLNQSLFERLIKLQLAPI--RLTTQYRMHPCLSEFPSNMFYDGSLQNGIT 704
Query: 465 HPSGVKRTS------STEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQS 518
H ++R + P + ++ EE S +N EA R ++
Sbjct: 705 HEQRLRRDVEFPWPIAETPMMFWSNLGN---EEISTSGTSYLNRTEASNVEKTVTRFFKA 761
Query: 519 GVHASDIGIITPYAAQ--VVLLKILRS---KDDKLKNMEVSTVDGFQGREKEAIIISMVR 573
GV S+IG+ITPY Q ++ + S K + K +EV++VD FQGREK+ I++S VR
Sbjct: 762 GVKPSEIGVITPYEGQRSYIVTTMQNSGSFKKEYYKEVEVASVDAFQGREKDFIVLSCVR 821
Query: 574 SNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
SN + +GFLSD RR+NVA+TRA+ ++ + + +S L+ +F++ ++ G
Sbjct: 822 SNENQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEG 879
>gi|261328192|emb|CBH11169.1| nonsense mRNA reducing factor 1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 842
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 172/480 (35%), Positives = 254/480 (52%), Gaps = 50/480 (10%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAF----KP-FNSNLDH 199
N V +R +AL Q ++ + +A L + G QK ++ F +P + NL++
Sbjct: 317 NGVADKRKMEALQQFARS-EGSVSAYLYFTILG-QKERAAHRNSGFDTEPEPRGHHNLNY 374
Query: 200 SQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQ---EVKRGSKILACAASNIAVDNI 256
SQ+ A+ AL + + ++ GPPGTGKT+T V II + VK S+IL CA SN+AVD++
Sbjct: 375 SQEQALRVALRNP-LTLIQGPPGTGKTSTSVAIIRELHSHVK--SRILVCAPSNVAVDHL 431
Query: 257 VERLVPHRVRLVRLGHPARL-LPQVLES-ALDAQVLRGDNSSLASDIRKEM--KALNGKL 312
+R+ +++VRL R +P +ES L+ QV N+S + KE+ GK
Sbjct: 432 AQRVSGTGLKVVRLQAKYRNDIPCSVESIGLERQVRDYINASSGLERLKELLDSMQTGKS 491
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
L KD T ++ +++ L +++NADVV T GA +L F
Sbjct: 492 LNDKDYGTYKDGVEKIERL--------------ILRNADVVCCTCIGAGDYRLKTMKFKH 537
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDEA Q E I L++G++ IL GDH QL P V S AEK G R+LFERL L
Sbjct: 538 VLIDEATQGTEPEVLIPLVRGAKQVILVGDHCQLRPLVFSTAAEKAGYQRSLFERLV-LM 596
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS--------TEPTLLLID 483
G L VQYRM+ + + S Y ++ + +R +S T+P + +
Sbjct: 597 GHRPVR-LDVQYRMNPSLSFFPSHHYYEGTLQNGVTAEQRDASEVFPWPDVTKP-IFFYN 654
Query: 484 IAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRS 543
G EE S +N EA + +LIQ GV DIG+ITPY +Q L+ S
Sbjct: 655 ATG--NEELGSNGRSYLNRAEAALTEQIVTKLIQGGVEPGDIGVITPYRSQCRYLRSYLS 712
Query: 544 KDDKLK-----NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARR 598
+ +L +E+S+VD FQGREKE II+S VRSN ++ GF++D RR+NV++TRA+R
Sbjct: 713 RSGRLPMEVYDRVEISSVDAFQGREKEFIILSCVRSNHRQGAGFVTDGRRLNVSLTRAKR 772
>gi|72389186|ref|XP_844888.1| regulator of nonsense transcripts 1 [Trypanosoma brucei TREU927]
gi|62359996|gb|AAX80419.1| regulator of nonsense transcripts 1, putative [Trypanosoma brucei]
gi|70801422|gb|AAZ11329.1| regulator of nonsense transcripts 1, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 842
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 172/482 (35%), Positives = 257/482 (53%), Gaps = 54/482 (11%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAF----KP-FNSNLDH 199
N V +R +AL Q ++ + +A L + G QK ++ F +P + NL++
Sbjct: 317 NGVADKRKMEALQQFARS-EGSVSAYLYFTILG-QKERAAHRNSGFDTEPEPRGHHNLNY 374
Query: 200 SQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQ---EVKRGSKILACAASNIAVDNI 256
SQ+ A+ AL + + ++ GPPGTGKT+T V II + VK S+IL CA SN+AVD++
Sbjct: 375 SQEQALRVALRNP-LTLIQGPPGTGKTSTSVAIIRELHSHVK--SRILVCAPSNVAVDHL 431
Query: 257 VERLVPHRVRLVRLGHPARL-LPQVLES-ALDAQVLRGDNSSLASDIRKEMKALN----G 310
+R+ +++VRL R +P +ES L+ QV GD + +S + + + L+ G
Sbjct: 432 AQRVSGTGLKVVRLQAKYRNDIPCSVESIGLERQV--GDYINASSGLERLKELLDSMQTG 489
Query: 311 KLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
K L KD T ++ +++ L +++NADVV T GA +L F
Sbjct: 490 KSLNDKDYGTYKDGVEKIERL--------------ILRNADVVCCTCIGAGDYRLKTMKF 535
Query: 371 DLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
V+IDEA Q E I L++G++ IL GDH QL P V S AEK G R+LFERL
Sbjct: 536 KHVLIDEATQGTEPEVLIPLVRGAKQVILVGDHCQLRPLVFSTAAEKAGYQRSLFERLV- 594
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS--------TEPTLLL 481
L G L VQYRM+ + + S Y ++ + +R +S T+P +
Sbjct: 595 LMGHRPVR-LDVQYRMNPSLSFFPSHHYYEGTLQNGVTAEQRDASEVFPWPDVTKP-IFF 652
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL 541
+ G EE S +N EA + +LIQ GV DIG+ITPY +Q L+
Sbjct: 653 YNATG--NEELGSNGRSYLNRAEAALTEQIVTKLIQGGVEPGDIGVITPYRSQCRYLRSY 710
Query: 542 RSKDDKLK-----NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
S+ +L +E+S+VD FQGREKE II+S VRSN ++ GF++D RR+NV++TRA
Sbjct: 711 LSRSGRLPMEVYDRVEISSVDAFQGREKEFIILSCVRSNHRQGAGFVTDGRRLNVSLTRA 770
Query: 597 RR 598
+R
Sbjct: 771 KR 772
>gi|170097065|ref|XP_001879752.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645155|gb|EDR09403.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 829
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 166/502 (33%), Positives = 251/502 (50%), Gaps = 78/502 (15%)
Query: 176 FGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII-L 234
+ P V++ D P L+ SQ A++ + + + ++ GPPGTGKT T++E I L
Sbjct: 283 YAHADPFVIEGD----PPLDGLNRSQIRAVATMIKHR-LSLVQGPPGTGKTKTIIETIKL 337
Query: 235 QEVKR--GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPAR----LLPQVLESAL--- 285
+V IL C +N+AVDN+VE LV V+ +R+G L P L++ L
Sbjct: 338 LKVHFEIPHPILVCTYTNVAVDNLVEGLVNAGVKALRVGFGGSIKESLRPHSLDTKLEEH 397
Query: 286 --------------DAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRR---EIQKEL 328
D QV D + D++ ++ + + L K++N ++ +QK+
Sbjct: 398 RLQKTLKAQIKEKDDLQVKMDDLEARLRDVQDKISSTSTGRLVEKEQNMKKALVSMQKQF 457
Query: 329 RTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWI 388
+ QQ + DV+ AD + TT + L+ T F +V +DEA+ + E A I
Sbjct: 458 AVTKMKVYSIQQEMLRDVVNAADAICTTCITSACMALNVTDFPVVFLDEASMSTEPASLI 517
Query: 389 ALLKGSRCI-LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS--MLTVQYRM 445
++KGSR + L GDH QLPP + S EA+ GLG +LFERL G+ ML VQYRM
Sbjct: 518 PIMKGSRHVALIGDHKQLPPVIISREAQALGLGMSLFERLT---GEAAVPSVMLDVQYRM 574
Query: 446 HEHIMNWSSKQLYN-----SKIKAHPSGVKRTSSTE-------------PTLLLIDIAGC 487
H I + S + YN + + + R S + P+++ +D AG
Sbjct: 575 HPAISRFPSHEFYNRALLDGTVDVFGNAIPRLSPPDSHYLRPHVETGASPSIVFLDHAGD 634
Query: 488 DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVH--ASDIGIITPYAAQVVLLKILRSKD 545
E KD S +N EA + + + L+ + H SDIGII PY AQ+ LL L + D
Sbjct: 635 --ESVKDR--SRVNRNEAYIVASVVEDLLLNNPHLRGSDIGIIAPYVAQISLLTRLFNTD 690
Query: 546 D----------------KLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRM 589
+L ++E+ TVDGF+GREKE II S VR+N+ +GFL+D+RR+
Sbjct: 691 ATYQARFKEVLGDHRAMQLPHIEIKTVDGFEGREKEVIIFSTVRNNAGGYIGFLADKRRL 750
Query: 590 NVAVTRARRQCCLVCDTETVSS 611
NV +TRA+R +V T+ S
Sbjct: 751 NVGLTRAKRGLIVVGSINTLKS 772
>gi|402468945|gb|EJW04018.1| hypothetical protein EDEG_01691 [Edhazardia aedis USNM 41457]
Length = 699
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 167/526 (31%), Positives = 271/526 (51%), Gaps = 77/526 (14%)
Query: 140 LEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKD--------IAFK 191
LE+L E+T+++ + LI+ +K +QN F E +L D +FK
Sbjct: 196 LEEL--ELTHKKTQ--LIEKNKSIQNPE--------FAENSSNILSTDNLEENEKYSSFK 243
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNI 251
N NL+ SQK+A+ K + + F + GPPGTGKTTT+VEII Q + + K+L C SN
Sbjct: 244 FLNVNLNDSQKEAV-KLIFKEISFKILGPPGTGKTTTIVEIIHQLINKNKKLLICGPSNA 302
Query: 252 AVDNIVERLV--PHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALN 309
++DNI++ + P + RLG + + L+ LA D K M+
Sbjct: 303 SIDNILQSFLKNPTKCVFFRLGSSFKCYKGFEKYNLN---------QLAQDSVKYMQDHA 353
Query: 310 GKLLKTKDK-----NTRREI-----QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
L K K+K NT+ +I + EL ++KE + +Q + IK+A+V+ +TL
Sbjct: 354 DDLKKNKEKAYSKKNTKNKIDLKQTKNELAEINKEIKTKQINFKKEKIKSANVIFSTLYS 413
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGL 419
++ KL+N FD VIIDE Q++E+ +A+ KG ILAGD QL P Q ++ E
Sbjct: 414 SL--KLENVQFDWVIIDECCQSMEVESLMAISKGKNFILAGDPFQLGPVTQ-LKYE---- 466
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTL 479
+LFERL L T L QYRM E ++++S+K Y + I + + + P +
Sbjct: 467 -ISLFERLYKL----QTIWLKEQYRMCELLISFSNKYFYKNIIISKLKSDFKFFNISP-I 520
Query: 480 LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMA----------HAKRLIQSGVHASDI---- 525
L ID + + + D E S NE EA + + + ++ S H++ I
Sbjct: 521 LFIDTST-SYQYESDSETSKYNEEEASICVKLLSYINKQVKNQNQMFTSYKHSNSIVGDE 579
Query: 526 -----GIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEV 580
G+I PY+AQV +I ++ D + +STVD FQG+E++ +++S+VRSN + ++
Sbjct: 580 SLFSVGVIAPYSAQV--QQITKNIDKYDYSCIISTVDSFQGQERDVMVLSLVRSNLENDI 637
Query: 581 GFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHA 626
GFL + RR NVA+TR ++ ++ ++ F + I + + +A
Sbjct: 638 GFLEEIRRTNVAITRCKKGLVIIGNSLVFRKHPFYGKFINFLQHNA 683
>gi|358057220|dbj|GAA96829.1| hypothetical protein E5Q_03501 [Mixia osmundae IAM 14324]
Length = 925
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 159/458 (34%), Positives = 243/458 (53%), Gaps = 38/458 (8%)
Query: 176 FGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVE---I 232
+ P VL+ D +L+ +Q AI+++LSS+ ++ GPPGTGK+ T++E +
Sbjct: 444 YTRSHPIVLEGDPVL-----DLNRTQIRAIAQSLSSRCA-LIQGPPGTGKSITIIEALRL 497
Query: 233 ILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRG 292
+ + IL CA +++AVD ++ R V +R +R+G ++ P + AQV R
Sbjct: 498 LKVHFQVPQPILVCAPTHVAVDQLLARAVKAGLRPLRVGLEDKVSPSAEPYCMLAQVARH 557
Query: 293 DNSSLASDIRKEMKALNGKLL---KTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKN 349
+ + ++ L+ + + T D+ + ++ L + E L D+ N
Sbjct: 558 PFAEKLEVMSDRIRGLDHQRIGPAATPDEAVDTKFKRVLSSRYFLE----SLIWADICSN 613
Query: 350 ADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPT 408
DV+ +T GA + + F +V IDEAAQ E + + L+KGS+ +L GDH QLP
Sbjct: 614 VDVIFSTCLGASVSHVASIDFPIVFIDEAAQCNEASTLVPLMKGSQQLVLIGDHKQLPSI 673
Query: 409 VQSVEAEKKGLGRTLFERLADLYGDEVTS-MLTVQYRMHEHIMNWSSKQLYNSKIKAHPS 467
S +A ++G +LFERL + V S ML QYRMH I + + Y +++ PS
Sbjct: 674 AMSPDATQEGFNISLFERL--MVSKRVPSVMLDTQYRMHPDISKFPNMAFYRGQLRDAPS 731
Query: 468 GVK--------RTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLI--Q 517
+K R S + L I CD E+K E S +NEGEAE + L+
Sbjct: 732 TLKSKQAAIRSRFSPAGKSSALTFI-NCDGLEQK-EGKSYINEGEAEEITLIVRDLLARN 789
Query: 518 SGVHASDIGIITPYAAQV-----VLLKILR-SKDDKLKNMEVSTVDGFQGREKEAIIISM 571
S + SDIGIITPYA QV ++L+ R ++ +EVS+VDGFQGREKE I+ S
Sbjct: 790 SDLRCSDIGIITPYAGQVHRLRRMMLQSWRFPAGARVDQIEVSSVDGFQGREKEVIVFSA 849
Query: 572 VRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
VRSN ++GFLSDRRR+NVA+TRA+ +V + T+
Sbjct: 850 VRSNKHSQLGFLSDRRRLNVALTRAKAALFVVGNALTL 887
>gi|358395794|gb|EHK45181.1| hypothetical protein TRIATDRAFT_243374 [Trichoderma atroviride IMI
206040]
Length = 1083
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 167/510 (32%), Positives = 270/510 (52%), Gaps = 51/510 (10%)
Query: 147 VTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGE-QKPTVLKKDIAFK---PFNSNLDHSQ 201
+Y RM+ A+ + V + +G I +L G +P +K + K P +L+ Q
Sbjct: 395 TSYDRMQLAMKTFA--VDDMSVSGYIFHILLGHICQPPPMKVTLPKKWSAPGLPDLNQGQ 452
Query: 202 KDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERL 260
DAI KA+ + + ++ GPPGTGKT T II K GS++L CA SN+AVD + ER+
Sbjct: 453 VDAI-KAVLQRPLSLIQGPPGTGKTVTSATIIYHLAKTSGSQVLVCAPSNVAVDQLCERI 511
Query: 261 VPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNT 320
+++VRL +R + +ES++ + LA + M N +L+K
Sbjct: 512 HRTGLKVVRLTAKSR---EDVESSV---------TFLALHEQVRMSEHNTELVKLS---- 555
Query: 321 RREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIID 376
+++ E+ LS ++E+K +QL A +++ NADV+ T GA +L F V+ID
Sbjct: 556 --QLKNEVGELSSQDEKKLRQLTKAAEREILSNADVICCTCVGAGDPRLSKMKFRNVLID 613
Query: 377 EAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEV 435
E+ Q+ E C I L+ G + +L GDH QL P + + +A K GL R+LFERL +L + +
Sbjct: 614 ESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNRSLFERLINLKINPI 673
Query: 436 TSMLTVQYRMHEHIMNWSSKQLYNSKIK---AHPSGVKR-----TSSTE-PTLLLIDIAG 486
L QYRMH + + S Y+ ++ H V++ TE P + +I
Sbjct: 674 P--LKTQYRMHPCLSEFPSNMFYDGTLQNGITHEQRVRKDVDFPWPVTEMPMMFWSNIG- 730
Query: 487 CDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILRS-- 543
EE S +N EA R ++GV S+IG+ITPY Q ++ +++
Sbjct: 731 --HEEISTSGTSYLNRTEASNVEKTVTRFFKAGVRPSEIGVITPYEGQRSYIVSTMQNSG 788
Query: 544 --KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
K + K++EV++VD FQGREK+ I++S VRSN + +GFLSD RR+NVA+TRA+
Sbjct: 789 TYKKEMYKDVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAKYGLV 848
Query: 602 LVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
++ + + +S L+ +F++ ++ G
Sbjct: 849 ILGNPKVLSKHELWHNLLAHFKDRKCFVEG 878
>gi|346326262|gb|EGX95858.1| nonsense transcript regulator [Cordyceps militaris CM01]
Length = 1084
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 189/656 (28%), Positives = 306/656 (46%), Gaps = 92/656 (14%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
+ ++ PL+ +E + + + L AQ + + V+ GL K L F
Sbjct: 273 HYQNIFGPLVKMESDYD----------KKLKEAQSEDNLT-----VEWSLGLNNKHLATF 317
Query: 77 QSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEG 133
K G+V K D ++L+ N +L P G G V ++ +S ++ + G
Sbjct: 318 NLRKIESGEV----KLAVGDEMLLRYN-GELREPWQGVGYVMKIPNSQSDEVCLELRKTG 372
Query: 134 --------LNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK 185
L+ + + +Y RM+ A+ + V + +G I T+L
Sbjct: 373 NDRSNPTDLSHNFSADYVWKATSYDRMQLAMKTFA--VDDMSVSGFI-------FHTLLG 423
Query: 186 KDIAFKPFNSNL------------DHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII 233
D+ +P SNL + SQ DAI L K + ++ GPPGTGKT T II
Sbjct: 424 HDVHLQPMKSNLPKKWSAPGLPDLNQSQVDAIRSVLQ-KPLSLIQGPPGTGKTVTSATII 482
Query: 234 LQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPAR--LLPQVLESALDAQVL 290
K G+++L CA SN+AVD + ER+ +++VRL +R + V AL QV
Sbjct: 483 YHLSKMSGNQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVESSVSFLALHEQVR 542
Query: 291 RGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNA 350
+++S + + ++K G+L+ + +K+ R L+K + +++ NA
Sbjct: 543 MSEHNSEFAKL-SQLKIEAGELIS--------QDEKKFRQLTKAAER-------EILTNA 586
Query: 351 DVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTV 409
DVV T GA +L F V+IDE+ Q+ E C I L+ G + +L GDH QL P +
Sbjct: 587 DVVCCTCVGAGDPRLSKIKFRSVLIDESTQSAEPECIIPLMLGCKQVVLVGDHKQLGPVI 646
Query: 410 QSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGV 469
+ +A K GL ++LFERL L + +L QYRMH + + S Y+ ++ +
Sbjct: 647 MNKKAAKAGLSQSLFERLMQLRLQPI--LLNTQYRMHPCLSEFPSNMFYDGSLQNGVTQE 704
Query: 470 KRTS---------STEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGV 520
+R + P + +I EE S +N EA R ++GV
Sbjct: 705 QRIRKDVDFPWPVAEMPMMFWSNIGN---EEISTSGTSYLNRTEASNVEKIVTRFFKAGV 761
Query: 521 HASDIGIITPYAAQ-----VVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSN 575
++IG+ITPY Q + SK D K +EV++VD FQGREK+ I++S VRSN
Sbjct: 762 KPAEIGVITPYEGQRSYIVTTMQNSGTSKKDLYKGVEVASVDAFQGREKDFIVLSCVRSN 821
Query: 576 SKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+ +GFLSD RR+NVA+TRA+ ++ + +S L+ +F + ++ G
Sbjct: 822 ENQGIGFLSDPRRLNVALTRAKYGLVILGNPRVLSKHELWYNLLTHFRDRRCFVEG 877
>gi|322701174|gb|EFY92925.1| Regulator of nonsense transcripts 1 [Metarhizium acridum CQMa 102]
Length = 1083
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 193/658 (29%), Positives = 313/658 (47%), Gaps = 96/658 (14%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
+ ++ PL+ +E + + + L AQ + I V GL K L+ F
Sbjct: 275 HYQNIFGPLVKMESDYD----------KKLKEAQSEDGLI-----VRWDYGLNNKHLVSF 319
Query: 77 QSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSI--------TVA 125
K GDV K D + L+ N +L P G G V ++ +S
Sbjct: 320 NLHKIESGDV----KLAVGDEMRLRYN-GELREPWEGVGYVIKIPNSQSDEVCLELRKTG 374
Query: 126 FDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLK 185
D + L+ + + +Y RM+ A+ + V + +G I T+L
Sbjct: 375 NDKLVPTDLSHNFSADYVWKATSYDRMQLAMKTFA--VDDMSVSGYI-------FHTLLG 425
Query: 186 KDIAFKPFNS------------NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII 233
++ +P S +L+ SQ DAI K++ K + ++ GPPGTGKT T II
Sbjct: 426 HEVQLQPVQSRLPRKWSAPGLPDLNQSQVDAI-KSVLQKPLSLIQGPPGTGKTVTSATII 484
Query: 234 LQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRG 292
K G+++L CA SN+AVD + ER+ +++VRL +R + +ES++
Sbjct: 485 YHLAKMSGNQVLVCAPSNVAVDQLCERIHRTNLKVVRLTAKSR---EDVESSV------- 534
Query: 293 DNSSLASDIRKEMKALNGKLLK-TKDKNTRREIQKELRTLSKEERKRQQL---AVTDVIK 348
S LA + + N +L+K ++ KN E+ S++E+K +QL A +++
Sbjct: 535 --SFLALHEQVRLSEHNSELVKLSQLKNDVGELS------SQDEKKFKQLTKAAEREILN 586
Query: 349 NADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPP 407
NADVV T GA +L F V+IDE+ Q+ E C I L+ G + +L GDH QL P
Sbjct: 587 NADVVCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGP 646
Query: 408 TVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS 467
+ + +A K GL ++LFERL L + LT QYRMH + + S Y+ ++ +
Sbjct: 647 VIMNKKAAKAGLNQSLFERLIKLQLAPI--RLTTQYRMHPCLSEFPSNMFYDGSLQNGIT 704
Query: 468 GVKRTS---------STEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQS 518
+R + P + ++ EE S +N EA R ++
Sbjct: 705 HEQRLRKDVDFPWPIAETPMMFWSNLGN---EEISTSGTSYLNRTEASNVEKTVTRFFKA 761
Query: 519 GVHASDIGIITPYAAQ--VVLLKILRS---KDDKLKNMEVSTVDGFQGREKEAIIISMVR 573
GV S+IG+ITPY Q ++ + S K + K +EV++VD FQGREK+ I++S VR
Sbjct: 762 GVKPSEIGVITPYEGQRSYIVTTMQNSGTYKKEYYKEVEVASVDAFQGREKDFIVLSCVR 821
Query: 574 SNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
SN + +GFLSD RR+NVA+TRA+ ++ + + +S L+ +F++ ++ G
Sbjct: 822 SNENQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEG 879
>gi|358388726|gb|EHK26319.1| hypothetical protein TRIVIDRAFT_218486 [Trichoderma virens Gv29-8]
Length = 1083
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 168/510 (32%), Positives = 270/510 (52%), Gaps = 51/510 (10%)
Query: 147 VTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGE-QKPTVLKKDIAFK---PFNSNLDHSQ 201
+Y RM+ A+ + V + +G I +L G +P +K + K P +L+ Q
Sbjct: 395 TSYDRMQLAMKTFA--VDDMSVSGYIFHILLGHICQPPPMKVTLPKKWSAPGLPDLNQGQ 452
Query: 202 KDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERL 260
DAI +A+ K + ++ GPPGTGKT T II K GS++L CA SN+AVD + ER+
Sbjct: 453 VDAI-RAVLQKPLSLIQGPPGTGKTVTSATIIYHLAKMSGSQVLVCAPSNVAVDQLCERV 511
Query: 261 VPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNT 320
+++VRL +R + +ES++ S LA + M N +L+K
Sbjct: 512 HRTGLKVVRLTAKSR---EDVESSV---------SFLALHEQVRMSEHNSELVKLS---- 555
Query: 321 RREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIID 376
+++ E+ LS ++E+K +QL A +++ NADV+ T GA +L F V+ID
Sbjct: 556 --QLKVEVGELSSQDEKKLRQLTKAAEREILSNADVICCTCVGAGDPRLSKMKFRNVLID 613
Query: 377 EAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEV 435
E+ Q+ E C I L+ G + +L GDH QL P + + +A K GL R+LFERL +L + +
Sbjct: 614 ESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNRSLFERLINLKINPI 673
Query: 436 TSMLTVQYRMHEHIMNWSSKQLYNSKIK---AHPSGVKR-----TSSTE-PTLLLIDIAG 486
L QYRMH + + S Y+ ++ H V++ TE P + +I
Sbjct: 674 P--LKTQYRMHPCLSEFPSNMFYDGTLQNGITHEQRVRKDVDFPWPVTEMPMMFWSNIG- 730
Query: 487 CDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILRS-- 543
EE S +N EA R ++GV S+IG+ITPY Q ++ +++
Sbjct: 731 --HEEISTSGTSYLNRTEASNVEKTVTRFFKAGVKPSEIGVITPYEGQRSYIVSTMQNSG 788
Query: 544 --KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
K + K++EV++VD FQGREK+ I++S VRSN + +GFLSD RR+NVA+TRA+
Sbjct: 789 TYKKELYKDVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAKYGLV 848
Query: 602 LVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
++ + + +S L+ +F++ ++ G
Sbjct: 849 ILGNPKVLSKHELWHNLLAHFKDRKCFVEG 878
>gi|429860740|gb|ELA35464.1| ATP-dependent helicase nam7 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1088
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 170/506 (33%), Positives = 262/506 (51%), Gaps = 57/506 (11%)
Query: 147 VTYRRMKDALIQLSKGVQNGPAAGLI-------PVLFGEQKPTVLKKDIAFK-PFNSNLD 198
+Y RM+ A+ + V + +G I V QK T+ KK F P +L+
Sbjct: 396 TSYDRMQYAMKTFA--VDDMSVSGYIFHKLLGHDVAVAPQKTTMPKK---FSVPGLPDLN 450
Query: 199 HSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIV 257
SQ AI KA+ S + ++ GPPGTGKT T II K ++L CA SN+AVD +
Sbjct: 451 TSQIAAI-KAVLSTPLSLIQGPPGTGKTVTSATIIYHLCKMNNGQVLVCAPSNVAVDQLC 509
Query: 258 ERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKD 317
ER+ +++VRL +R + +ES++ S LA + M NG+L+K
Sbjct: 510 ERIHRTGLKVVRLTAKSR---EDVESSV---------SFLALHEQVRMNDSNGELVKLA- 556
Query: 318 KNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFDLV 373
+++ EL LS ++E+K +QL A D++ NADVV T GA +L F V
Sbjct: 557 -----QLKSELGELSSQDEKKFKQLTKAAERDILHNADVVCCTCVGAGDPRLSKMKFRNV 611
Query: 374 IIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG 432
+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL +L
Sbjct: 612 LIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVNL-- 669
Query: 433 DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK---AHPSGVKR------TSSTEPTLLLID 483
V L +QYRMH + + S Y+ ++ H ++R + P + +
Sbjct: 670 RLVPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTHRERLRRDVDFPWPVADMPMMFWSN 729
Query: 484 IAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILR 542
+ EE S +N EA R ++GV DIG+ITPY Q ++ ++
Sbjct: 730 LGN---EEISASGTSYLNRTEASNVEKVVTRFFKAGVKPGDIGVITPYEGQRSYIVSTMQ 786
Query: 543 S----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARR 598
+ K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+NVA+TRA+
Sbjct: 787 NTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAKY 846
Query: 599 QCCLVCDTETVSSDGFLKRLIEYFEE 624
++ + + +S L+ +F+E
Sbjct: 847 GLVIIGNPKVLSKHELWHHLLVHFKE 872
>gi|303283432|ref|XP_003061007.1| tRNA-splicing endonuclease positive effector [Micromonas pusilla
CCMP1545]
gi|226457358|gb|EEH54657.1| tRNA-splicing endonuclease positive effector [Micromonas pusilla
CCMP1545]
Length = 1099
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 152/476 (31%), Positives = 245/476 (51%), Gaps = 82/476 (17%)
Query: 168 AAGLIPVLFGEQKPTVLKKDIA---FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTG 224
A+GLIP + KD A P +L+ SQ++A+ AL+++ + ++ GPPGTG
Sbjct: 535 ASGLIP-----DRAEKFAKDFASGAVDPIAKSLNESQRNALRSALTNR-LTLVQGPPGTG 588
Query: 225 KTTTVVEII--LQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLE 282
KT T V I+ L + RG +L + SN AVDN+V+ + R+R+VR+G + P++L+
Sbjct: 589 KTYTSVAIVKGLLAMNRG-PVLCTSDSNTAVDNLVQGMADARMRVVRVGRSEAVRPELLK 647
Query: 283 SALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLA 342
L+ R + + LA
Sbjct: 648 YVLE------------------------------------------RMFNDRTGPERSLA 665
Query: 343 VTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGS-RCILAGD 401
++ ADVV T +GA S L+ +F V++DEA+Q E + + L KG + +L GD
Sbjct: 666 QQRALRQADVVCCTCSGAGSDMLEKFNFSAVLLDEASQVTEPSSLVPLSKGCHQLVLVGD 725
Query: 402 HLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSK 461
H QLPPTV +A GL +LF+RLA++ +L VQ+RMH + + S Y+ +
Sbjct: 726 HKQLPPTVTCRDAGNAGLSTSLFDRLANM--GVKPKLLDVQFRMHPALSRFPSDAFYDGR 783
Query: 462 IKAH--------PSGVKRTSSTEPTLLL-IDIAGCDM----EEKKDEEDSTMNEGEAEVA 508
+K+ PSG ++ P + + + G E+++ S +N+ EA+V
Sbjct: 784 VKSGTLARDRPAPSGFAWPNAGVPIAFVPVGVPGVSGAYGGHERREGNGSFVNQREADVV 843
Query: 509 MAHAKRLIQSG---VHASDIGIITPYAAQVV-LLKILRSK--------DDKLKNMEVSTV 556
+ RL+++G + D+G++TPYAAQV + + LR++ + +EVS+V
Sbjct: 844 VDVLSRLLRAGGGELEPRDVGVVTPYAAQVRHIRRQLRNRGIQTGIDRETGKPGVEVSSV 903
Query: 557 DGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSD 612
DG+QGREKE +++S VRSN + +GF+SD RR NV +TRA+R + D T++SD
Sbjct: 904 DGYQGREKEVMVVSTVRSNDRGTMGFVSDARRCNVTLTRAKRGVVVCGDPNTLASD 959
>gi|401881567|gb|EJT45865.1| hypothetical protein A1Q1_05671 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1018
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 157/453 (34%), Positives = 231/453 (50%), Gaps = 45/453 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIIL---QEVKRGSKILACAASNIAV 253
L+ SQ AI+ LS + + ++ GPPGTGKT +VE I Q + +L CA +N+AV
Sbjct: 534 LNPSQTRAIAMMLSER-LSLVQGPPGTGKTRVIVETIKLLKQHWQIPHPVLVCAHTNVAV 592
Query: 254 DNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
DN+VE L V VR G P R+ P+V L+A++ + + + R ++L +L
Sbjct: 593 DNLVEGLKTQGVNAVRFGSPDRVSPRVEAHTLEARIEQHPAYPVLNRARNSKESLQAELS 652
Query: 314 KTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLV 373
+ R QKE+ L+ ++L +V+ ADVV TT A SR L+ F V
Sbjct: 653 ENLAGPQREAKQKEIGKLNGRIYLLKRLLQAEVLHEADVVCTTCLSATSRVLEVIDFPFV 712
Query: 374 IIDEAAQALEIACWIALLKGS-RCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG 432
+DEA+ A E + L KGS + + GDH QLPP + S A++ GLG +LFERL ++
Sbjct: 713 FLDEASMATEPLSIVPLTKGSAQVAIIGDHKQLPPVIVSEAAQQGGLGTSLFERL--IHE 770
Query: 433 DEVTS-MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTL-------LLID- 483
V S ML QYRMH I +SS+ YN +++ G +P L LL D
Sbjct: 771 QAVPSIMLDTQYRMHPSIAAFSSEAFYNGQLR---DGTVVDGQVDPVLHPPTTAFLLPDG 827
Query: 484 -------IAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG--VHASDIGIITPYAAQ 534
D E + S N EA L+ S + +DIG+I PY+AQ
Sbjct: 828 DSSKSLTFLNHDFPESP-QNRSIANHHEAGRVCDIVADLLASNPDLKGADIGVIAPYSAQ 886
Query: 535 VVLLKILRSKDDK----------------LKNMEVSTVDGFQGREKEAIIISMVRSNSKK 578
+ L+ + D++ ++++E+ TVDGF+GREK II S VRSN+
Sbjct: 887 IRLITEFLTIDERRQRAFRQWLGPERAREIEDIEIRTVDGFEGREKSVIIFSTVRSNTGG 946
Query: 579 EVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
+GFL D RR+NV +TRA+R ++ T+S+
Sbjct: 947 FLGFLGDWRRLNVGLTRAKRALIMLGSLRTLSN 979
>gi|70949042|ref|XP_743968.1| regulator of nonsense transcripts [Plasmodium chabaudi chabaudi]
gi|56523717|emb|CAH78222.1| regulator of nonsense transcripts, putative [Plasmodium chabaudi
chabaudi]
Length = 670
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/439 (33%), Positives = 238/439 (54%), Gaps = 40/439 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII--LQEVKRGSKILACAASNIAVD 254
L+HSQ DAI K+L+S + ++ GPPGTGKT T ++ + + K G K+L A SN+AVD
Sbjct: 101 LNHSQIDAIQKSLNSP-LSLIQGPPGTGKTLTCATLVYHMHKTKMGGKVLVTAPSNVAVD 159
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
+ R+ +++VRL +R + + S D L L +D+ +E+ KLL
Sbjct: 160 QLSVRIHRTGLKVVRLCARSR---ESVSSIADYLYLHNQVKLLKTDVGEEL----NKLL- 211
Query: 315 TKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
E+++E+ LS K+E + ++L A ++ ADV+ TT GA+ ++L F
Sbjct: 212 --------ELKEEVGELSQKDENRLKKLILHAEYKILIEADVICTTCVGAMDKRLKKFRF 263
Query: 371 DLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
+ V++DEA Q+ E C + L+ + +L GDH QL P + +A GLG++LFERL L
Sbjct: 264 NQVLVDEATQSTEPECLVPLVTAKQIVLVGDHCQLGPIIVCKKAASAGLGKSLFERLVML 323
Query: 431 YGDEVTSM-LTVQYRMHEHIMNWSSKQLYNS--------KIKAHPSGVKRTSSTEPTLLL 481
+T L VQYRMH + + S Y+ K + +P +++ +
Sbjct: 324 ---GITPFRLEVQYRMHPCLSEFPSYVFYDGCLQNGITLKEREYPLKNFPWPNSKYPMFF 380
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL 541
+ G +EE S +N EA+ + L+ SG+ A+ IG+ITPY Q + L
Sbjct: 381 YNSNG--LEEMSASGTSYLNRSEAQNMEILVRALLNSGLKATQIGVITPYEGQRAYITSL 438
Query: 542 RSKDDKLK---NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARR 598
K+ + ++EV++VD FQGREK+ I++S VRSN K +GFL+D RR+NVA+TRA+
Sbjct: 439 FQKNISYQHCLDIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAKY 498
Query: 599 QCCLVCDTETVSSDGFLKR 617
+ + + +S F+ +
Sbjct: 499 GLIICGNAKVLSRHHFISK 517
>gi|167516556|ref|XP_001742619.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779243|gb|EDQ92857.1| predicted protein [Monosiga brevicollis MX1]
Length = 856
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 169/559 (30%), Positives = 277/559 (49%), Gaps = 55/559 (9%)
Query: 102 ADLGSPALGQGVVYRLKDS-----SITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDAL 156
+L P G+G V ++ D+ ++ + D+P + + +E + +T+ RM++A+
Sbjct: 268 GELSRPWQGEGRVTKIADNHSEEYALELRNKDVPTQCTQN-FMVEFIWKSITFDRMQNAM 326
Query: 157 IQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN----SNLDHSQKDAISKALSSK 212
+ + +A + L G Q L K K F+ L+HSQ +AI +A+ +
Sbjct: 327 KTFAVD-ERSVSAHIYHQLLGHQIEPALIKVTMPKRFSVKGLPELNHSQIEAI-RAVLQR 384
Query: 213 NVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLG 271
+ ++ GPPGTGKT T ++ V+ + K+L CA SNIAVD + E++ V+++R+
Sbjct: 385 PLSLIQGPPGTGKTVTSASLVYHLVQQKHGKVLVCAPSNIAVDQLTEKIHRTGVKVLRVC 444
Query: 272 HPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG-----KLLKTKDK--NTRREI 324
+R E A D +V S S + +++ + G KLLK KD
Sbjct: 445 AKSR------EEA-DTRV------SFLS-LHNQVRTMKGHPEYQKLLKLKDAVGELSEAD 490
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
+K RTL Q++ +++++ADV+ T A R++ +F V+IDEA Q+ E
Sbjct: 491 EKRFRTL-------QRIIEQELLRSADVICCTCAAAGDRRVSGQTFRTVLIDEATQSTEP 543
Query: 385 ACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQY 443
C + L+ G+R C++ GDH QL P V +A GL ++LFER L V L VQY
Sbjct: 544 ECMLPLVLGTRQCVMVGDHCQLGPVVMCKKAASAGLSQSLFERCVLLGIRPVR--LQVQY 601
Query: 444 RMHEHIMNWSSKQLYNSKIKAHPSGVKRT------SSTEPTLLLIDIAGCDMEEKKDEED 497
RMH + + S Y ++ + +R P ++ A EE
Sbjct: 602 RMHPCLSEFPSNTFYEGSLQNGVTASERLMPAVDFPWPVPETPMMFYASMGQEEISASGT 661
Query: 498 STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN-----ME 552
S +N EA R ++SGV IGI+TPY Q + S + L+ +E
Sbjct: 662 SYLNRTEAANVEKMVTRFLKSGVTPEQIGIVTPYEGQRAYIVQYMSFNGTLRQPLYEAVE 721
Query: 553 VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSD 612
V++VD FQGREK+ II+S RSN + +GFL+D RR+NVA+TRA+ +V + + +S
Sbjct: 722 VASVDAFQGREKDYIILSCTRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQ 781
Query: 613 GFLKRLIEYFEEHAEYLSG 631
L+ +++E+ + G
Sbjct: 782 ALWNNLLVHYKENGCLVEG 800
>gi|384484388|gb|EIE76568.1| hypothetical protein RO3G_01272 [Rhizopus delemar RA 99-880]
Length = 1809
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 263/534 (49%), Gaps = 105/534 (19%)
Query: 181 PTVLKKD----IAFKPFNSNLDHSQKDAISKALSSKNVF-MLHGPPGTGKTTTVVEII-- 233
PT +KK I N N++ Q +AI+ A+ K F ++ GPPGTGKT T++ +I
Sbjct: 1121 PTTMKKPSTSVIQQYCTNYNVNEPQAEAIASAIQKKKGFSLIQGPPGTGKTKTILALIVS 1180
Query: 234 LQEVKRG-SKILACAASNIAVDNIVERL-----------VPHRVRL-----VRLGHPARL 276
L + ++G SK+L CA SN AVD I +RL P+ VR+ V R+
Sbjct: 1181 LLDQRQGYSKLLVCAPSNAAVDEITKRLKEGVMTAQGIKKPNVVRIGVADSVNASVKDRI 1240
Query: 277 LPQVLESALDAQVLRGDNSSLA-------------------------------------S 299
L +++E+ ++A++ G++++++ S
Sbjct: 1241 LDRLIEAEMEAKI--GNDATMSKMGARLDTLHSEIRNLQIGLDDVDREITQAGSDMVQMS 1298
Query: 300 DIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
+R + KAL KL TK K RE ++ + +E + A V NADVV TL+G
Sbjct: 1299 ILRSKRKALGAKL--TKAKMALREAYQDQKNYGQEMEVSRVRARQKVFANADVVCATLSG 1356
Query: 360 AVSRKLDN--TSFDLVIIDEAAQALEIACWIAL-LKGSRCILAGDHLQLPPTVQSVEAEK 416
+ L + SF+ VI+DEAAQ++EI+ I L RCIL GD QLPPTV S A K
Sbjct: 1357 SGHDMLTSMGASFETVIVDEAAQSIEISSLIPLKFDTQRCILVGDPNQLPPTVMSTVAAK 1416
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST- 475
++LF RL G EV ++L++QYRMH I + SK Y S+++ P G+ + SS
Sbjct: 1417 YDYQQSLFMRLEKTVGKEV-NLLSIQYRMHPEISTFPSKLFYQSRLQDGP-GMDKISSAI 1474
Query: 476 ------EPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQ---SGVHASDIG 526
P D+ D +EK S N EA+ A+ L+ + AS IG
Sbjct: 1475 WHALPEFPPYCFYDVR--DGQEKMGRGKSIFNVAEADAAVCLVDLLLTKLPTIKFASKIG 1532
Query: 527 IITPYAAQVVLLKIL---RSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFL 583
+ITPY QV LK R + + ++ +TVDGFQG+EKE +I S VR+ S + +GFL
Sbjct: 1533 VITPYKQQVGQLKARFQKRFGNGIVDAIDFNTVDGFQGQEKEIVIFSCVRAGSGRGIGFL 1592
Query: 584 SDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
+D RRMNV +TRA+ C L + HA LS SEY +
Sbjct: 1593 ADMRRMNVGLTRAK--CSL------------------FVLGHARSLSRSEYWGD 1626
>gi|444911442|ref|ZP_21231617.1| Superfamily I DNA/RNA helicase [Cystobacter fuscus DSM 2262]
gi|444718200|gb|ELW59016.1| Superfamily I DNA/RNA helicase [Cystobacter fuscus DSM 2262]
Length = 273
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/268 (43%), Positives = 165/268 (61%), Gaps = 14/268 (5%)
Query: 378 AAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS 437
AAQ+ E + L+ + +LAGD Q PPT+ S EA K GL +LFERL +GD V
Sbjct: 2 AAQSTEPLALLGFLRAPKVVLAGDPQQFPPTILSPEAAKAGLAVSLFERLLADHGDGVKR 61
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT---------SSTEPTLLLIDIAGCD 488
ML QYRM+ IM + SK++Y +++AHPS RT P +L +D AG
Sbjct: 62 MLREQYRMNTAIMTFPSKEMYGGELRAHPSVAGRTLVDVLPPETPGDFPPVLYLDTAGKG 121
Query: 489 MEEKKDEE-DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDK 547
EE+++++ S N GEA++ +A + L+ +G+ ++ +ITPY AQ LR + +
Sbjct: 122 FEEEQEKDTGSLFNTGEADLIVARVRELLAAGIAPRELAVITPYRAQA---HALRERVEP 178
Query: 548 L-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 606
L ++EV TVD FQGREK+AI++S+VRSNS+ ++GFLSD RRMNVA+TRARR +V D+
Sbjct: 179 LSPDVEVDTVDAFQGREKDAILVSLVRSNSEGQIGFLSDLRRMNVALTRARRHLFVVGDS 238
Query: 607 ETVSSDGFLKRLIEYFEEHAEYLSGSEY 634
T+S F R IE +E A Y S E+
Sbjct: 239 ATLSGHAFYARFIESTQEGAGYRSAWEW 266
>gi|423289930|ref|ZP_17268780.1| hypothetical protein HMPREF1069_03823 [Bacteroides ovatus
CL02T12C04]
gi|392666672|gb|EIY60185.1| hypothetical protein HMPREF1069_03823 [Bacteroides ovatus
CL02T12C04]
Length = 597
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 145/431 (33%), Positives = 224/431 (51%), Gaps = 24/431 (5%)
Query: 145 NEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
+E +YR M +AL + N A L +L G QKP + P+ L+ +Q+ A
Sbjct: 158 DETSYRAMFEALEDTIRAKDNR-LAELRDILLGTQKPGFRELYPVRFPW---LNSTQETA 213
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHR 264
++K L +++V ++HGPPGTGKTTT+VE I + + R ++L CA SN AV+ I E+LV
Sbjct: 214 VNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVNWICEKLVDRG 273
Query: 265 VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
V ++R+G+P R+ ++L S + + IRK ++ + G ++ + R +
Sbjct: 274 VPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGIRKSIREM-GSRMRRGSYSEREGM 332
Query: 325 QKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEI 384
+ + L + + D+ +A V+ +TL + R L+ F + IDEAAQALE
Sbjct: 333 RNRMSRLRDRATELEIQINADLFDSARVIASTLVSSNHRLLNGRRFPTLFIDEAAQALEA 392
Query: 385 ACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
ACWIA+ K R ILAGDH QLPPT++ +EA + GL TL E++ V S+L VQYR
Sbjct: 393 ACWIAIRKADRVILAGDHCQLPPTIKCIEASRGGLDHTLMEKVVQQKPSAV-SLLKVQYR 451
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKR-TSSTEPTLLLIDIAGCDMEE----------KK 493
MHE IM + S Y+ +++A P R + + ID + D E K
Sbjct: 452 MHETIMQFPSDWFYHGELEAAPEVRYRGILDFDTPMNWIDTSEMDFHEDFVGESFGRINK 511
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKNME- 552
E + + E E + +R++ + D G+I+PY AQV L+ L+
Sbjct: 512 QEANLLLQELETYIGRIGKERILDERI---DFGLISPYKAQVQYLRGKIKGSSFLRPFRS 568
Query: 553 ---VSTVDGFQ 560
V+TVDGFQ
Sbjct: 569 LITVNTVDGFQ 579
>gi|392587391|gb|EIW76725.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1113
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 170/535 (31%), Positives = 263/535 (49%), Gaps = 88/535 (16%)
Query: 176 FGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVE---I 232
+ ++ P V+ D F N+ +Q AI+ + K + ++ GPPGTGKT T++E +
Sbjct: 566 YSKKNPIVMPGDPVFDGLNA----TQIRAIAMMVGEK-ISLVQGPPGTGKTKTIIEAVKL 620
Query: 233 ILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRG 292
+ E + IL +N+AVDN+VE L+ ++ +R+G ++ + + LDA++ +
Sbjct: 621 LKVEFEVPQPILVATYTNVAVDNLVEGLLKAGLKPLRVGFGGKVNASLHDCTLDAKMEKH 680
Query: 293 DNSSLASDIRKEMKALNGKLL-------------KTKDKNTRREIQKELRT-LSKEERK- 337
+ + + E + +N + K +D + I + LR L ER+
Sbjct: 681 RHKPVVDKLLAEQERINQHIAELNKRLRERQRDPKIRDNARNQAIIENLRNALVVSERRL 740
Query: 338 ---RQQLAVT------DVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWI 388
R +L V D+ ADV+ TT +V+ L F +V +DEA+ + E A I
Sbjct: 741 GIVRGKLHVLHNDMLRDITAQADVICTTCISSVNSALSVIDFPVVFLDEASMSTEPASLI 800
Query: 389 ALLKGSRCI-LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHE 447
L++GS+ + L GDH QLPP + S EA+ KGLG +LFERL + G + ML VQYRMH
Sbjct: 801 PLMRGSQHVALIGDHKQLPPVIVSYEADLKGLGISLFERLTE-EGVVPSIMLDVQYRMHP 859
Query: 448 HIMNWSSKQLYN-------------------SKIKAHPSGVKRTSSTEPTLLLIDIAGCD 488
+ + S + YN + AH V ++ P+++ +D AG
Sbjct: 860 ALSYFPSLEFYNLSLQDGTVDSGGNVSPLLLPPLSAH-LPVDESTGNRPSIVFMDHAGS- 917
Query: 489 MEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVH--ASDIGIITPYAAQVVLLKILRSKDD 546
E KD S +N EA + + + L+ H DIGII PYAAQ+ LL L + D
Sbjct: 918 -ETLKDR--SRVNYDEANIVCSIIEDLLLRNEHMRGDDIGIIAPYAAQISLLTRLLNTDA 974
Query: 547 K----------------LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
K L +EV TVDGF+GR+K+ II S VR+N VGFL+DRRR+N
Sbjct: 975 KYARRFAATLGDRRVRELSKVEVRTVDGFEGRQKDVIIFSTVRNNPAGHVGFLADRRRLN 1034
Query: 591 VAVTRARRQCCLVCDTETV-SSDGFLKRL-----------IEYFEEHAEYLSGSE 633
V +TRA+R +V T+ S F + + +E + +A YL G +
Sbjct: 1035 VGLTRAKRGLFVVGSISTLKQSKSFTRGMAANPGGQTSKGVESWRRYAAYLVGQQ 1089
>gi|406696583|gb|EKC99865.1| hypothetical protein A1Q2_05830 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1018
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 157/453 (34%), Positives = 230/453 (50%), Gaps = 45/453 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIIL---QEVKRGSKILACAASNIAV 253
L+ SQ AI+ LS + + ++ GPPGTGKT +VE I Q + +L CA +N+AV
Sbjct: 534 LNPSQTRAIAMMLSER-LSLVQGPPGTGKTRVIVETIKLLKQHWQIPHPVLVCAHTNVAV 592
Query: 254 DNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
DN+VE L V VR G P R+ P+V L+A++ + + + R ++L +L
Sbjct: 593 DNLVEGLKTQGVNAVRFGSPDRVSPRVEAHTLEARIEQHPAYPVLNRARNSKESLQAELS 652
Query: 314 KTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLV 373
+ R QKE+ L+ ++ +V+ ADVV TT A SR L+ F V
Sbjct: 653 ENLAGPQREAKQKEIGKLNGRIYLLKRRLQAEVLHEADVVCTTCLSATSRVLEVIDFPFV 712
Query: 374 IIDEAAQALEIACWIALLKGS-RCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG 432
+DEA+ A E + L KGS + + GDH QLPP + S A++ GLG +LFERL ++
Sbjct: 713 FLDEASMATEPLSIVPLTKGSAQVAIIGDHKQLPPVIVSEAAQQGGLGTSLFERL--IHE 770
Query: 433 DEVTS-MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTL-------LLID- 483
V S ML QYRMH I +SS+ YN ++K G +P L LL D
Sbjct: 771 QAVPSIMLDTQYRMHPSIAAFSSEAFYNGQLK---DGTVVDGQVDPVLHPPTTAFLLPDG 827
Query: 484 -------IAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG--VHASDIGIITPYAAQ 534
D E + S N EA L+ S + +DIG+I PY+AQ
Sbjct: 828 DSSKSLTFLNHDFPESP-QNRSIANHHEAGRVCDIVADLLASNPDLKGADIGVIAPYSAQ 886
Query: 535 VVLLKILRSKDDK----------------LKNMEVSTVDGFQGREKEAIIISMVRSNSKK 578
+ L+ + D++ ++++E+ TVDGF+GREK II S VRSN+
Sbjct: 887 IRLITEFLTIDERRQRAFRQWLGPERAREIEDIEIRTVDGFEGREKSVIIFSTVRSNTGG 946
Query: 579 EVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
+GFL D RR+NV +TRA+R ++ T+S+
Sbjct: 947 FLGFLGDWRRLNVGLTRAKRALIMLGSLRTLSN 979
>gi|159487559|ref|XP_001701790.1| UPF1 protein [Chlamydomonas reinhardtii]
gi|158281009|gb|EDP06765.1| UPF1 protein [Chlamydomonas reinhardtii]
Length = 800
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 172/547 (31%), Positives = 269/547 (49%), Gaps = 54/547 (9%)
Query: 108 ALGQGVVYRLKDSSITVAF---DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQ 164
ALG + Y+ + F D+PE+ ++ + ++ RM++AL K
Sbjct: 257 ALGHVLTYQQSEEVCLELFTNVSDVPED-CTVGFSVDFVWRGTSFDRMRNALNTFRK-YS 314
Query: 165 NGPAAGLIPVLFGEQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHG 219
+ L ++ G +V L K P L+HSQ A+ K++ + + ++ G
Sbjct: 315 ASISGYLYHLILGHPVESVTLKIPLPKAGLGVPSLPELNHSQLHAV-KSVLQQPLSLIQG 373
Query: 220 PPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVDNIVERLVPHRVRLVRLGHPAR--L 276
PPGTGKT T I+ G+ ++L A SN+AVD + ++ +++VRL R +
Sbjct: 374 PPGTGKTVTSAAIVYHLAHSGTGQVLVAAPSNVAVDQLAHKMDQTGLKVVRLCAKTREAV 433
Query: 277 LPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKL--LKTKDKNTRREIQKELRTLSKE 334
V L QV L +RK + AL G L D +KEL++L
Sbjct: 434 ASPVEHLTLHYQV---HGCVLVGRLRK-LLALRGAQGGLNASD-------EKELKSL--- 479
Query: 335 ERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGS 394
R+R ++ +V++NADVV TT GA +L + F V+IDE+ QA E C I ++ G+
Sbjct: 480 -RRRLEM---EVLENADVVCTTCVGAGDPRLSHFRFQHVLIDESTQAAEPECLIPMVLGA 535
Query: 395 R-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWS 453
+ IL GDH QL P + +A + GL ++LFERL L + L VQYRMH + +
Sbjct: 536 KQVILVGDHCQLGPVIMCKKAAEAGLCQSLFERLRLLGVKPIR--LQVQYRMHPCLSEFP 593
Query: 454 SKQLYNSKIKAHPS-GVKRTSSTE--------PTLLLIDIAGCDMEEKKDEEDSTMNEGE 504
S Y ++ G +R + + P + + + EE S +N E
Sbjct: 594 SNTFYEGTLQNGTGMGERRLAGVDFPWPNPDKPMMFWVQLGA---EEISASSTSYLNRTE 650
Query: 505 AEVAMAHAKRLIQSGVHASDIGIITPYAAQ-----VVLLKILRSKDDKLKNMEVSTVDGF 559
A R +Q+G+ + IG+ITPY Q V+++ ++ D K +EVS+VD F
Sbjct: 651 AAAVEKVVTRFLQNGMSPAQIGVITPYEGQRAHVVSVMVRNGTARQDLYKEIEVSSVDAF 710
Query: 560 QGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLI 619
QGREK+ I++S VRSN +GFLSD RR+NVA+TRAR ++ + +S L+
Sbjct: 711 QGREKDIIVLSCVRSNEHSSIGFLSDPRRLNVALTRARFGLVVLGNPRVLSRQPLWNSLL 770
Query: 620 EYFEEHA 626
+YF+EH
Sbjct: 771 QYFKEHG 777
>gi|354610036|ref|ZP_09027992.1| DEAD-like helicase [Halobacterium sp. DL1]
gi|353194856|gb|EHB60358.1| DEAD-like helicase [Halobacterium sp. DL1]
Length = 748
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 242/509 (47%), Gaps = 81/509 (15%)
Query: 116 RLKDSS-ITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPV 174
R+ DS + A DD P L L N V Y R DAL V PA +
Sbjct: 275 RVDDSGRVAAALDDA------EPFWLRTLLNPVPYDRRLDAL----DAVWETPAKRRL-- 322
Query: 175 LFGEQKPTVLKKDIAFKPFNSN------LDHSQKDAISKALSSKNVFMLHGPPGTGKTTT 228
L GE +D+AF S L+ Q+ A+ A+++ +V +HGPPGTGKT T
Sbjct: 323 LTGE-------RDLAFGALPSGQRSGVELNGYQRRALGWAVAADDVVCIHGPPGTGKTRT 375
Query: 229 VVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQ 288
+V + V RG ++L A SN AVDN+
Sbjct: 376 LVAFVAHAVARGERVLVTAHSNQAVDNL-------------------------------- 403
Query: 289 VLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIK 348
L GD++ + E L+ + D R + + E+ + +
Sbjct: 404 -LVGDSTPDDA----EEGTLHAAVAADSDVTVARYGRHSRNRVVAEQYRGTP------VD 452
Query: 349 NADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPT 408
ADVV T GA + D +FD+ ++DEA QA A IA + +LAGDH QLPP
Sbjct: 453 GADVVAATTNGAAA--FDRDAFDVAVVDEATQASRAATAIAHACAEKLVLAGDHRQLPP- 509
Query: 409 VQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSG 468
EA + + +LFE L + YGD V +L QYRMHE I + ++ Y+ +++
Sbjct: 510 YSVTEAGEGEMRPSLFETLVERYGDRVAVLLCRQYRMHEAIATFPNEAFYDGRLETADRN 569
Query: 469 VKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTM-NEGEAEVAMAHAKRLIQSGVHASDIGI 527
T P + L+D+AG EE+++E +++ N EAEV + RL+ +GV +D+G+
Sbjct: 570 ADWTLDGFPPVSLVDVAG---EERREERGASVRNPQEAEVVVDRVTRLLDAGVSPADVGV 626
Query: 528 ITPYAAQVVLLKI-LRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR 586
I Y+ QV ++ L + D + + V TVD FQG E++AI++S RSN + GFL
Sbjct: 627 IAAYSGQVREIRSRLGTLDRETDGLTVDTVDSFQGGERDAIVVSFARSNPEGNAGFLEHS 686
Query: 587 ----RRMNVAVTRARRQCCLVCDTETVSS 611
RR+NVA+TRAR+ LV D +T+ S
Sbjct: 687 AEGPRRLNVALTRARKHLALVGDWDTLRS 715
>gi|390596463|gb|EIN05865.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 1024
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 261/518 (50%), Gaps = 93/518 (17%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR----GSKILACAASNIA 252
L+ SQ A++ + + V ++ GPPGTGKT T++E + + +KR IL C +N+A
Sbjct: 480 LNESQTRAVAMMVGER-VSLVQGPPGTGKTKTIIEAV-KLLKRHFAVPHPILVCTFTNVA 537
Query: 253 VDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKL 312
VDN+VE L P + +R+G+ ++ P + LDA++ + + S + ++ +AL ++
Sbjct: 538 VDNLVEGLAPS-LSPLRVGYGGKVKPSLYPHTLDAKLEQHELYSEVLKLERQEEALEKRV 596
Query: 313 LKTKDKNTRREIQKELRTLSKE-ERKR-------------------------------QQ 340
+ + +T+ + + L E +RKR +Q
Sbjct: 597 VSLRMSSTKAAEKLSIMPLDAEHDRKRANATKRRDRLDQEVTQCGTSLGNIRKRIYAFKQ 656
Query: 341 LAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCI-LA 399
++DV+ ADVV TT + L+ F +V +DEA+ + E A I L+KGS+ + L
Sbjct: 657 QMLSDVVHAADVVCTTCITSACTALNVIDFPVVFLDEASMSTEPASLIPLMKGSQHMTLI 716
Query: 400 GDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYN 459
GDH QLPP + S EA GLG +LFERL + G + ML +QYRMH I + S + YN
Sbjct: 717 GDHKQLPPVITSREAIAGGLGISLFERLTE-EGVVPSIMLDLQYRMHPQISKFPSAEFYN 775
Query: 460 SKIK--------AHPSGVKRTSSTE----------PTLLLIDIAGCDMEEKKDEEDSTMN 501
++ P+ ++ +S P+++ +D G +E KD S +N
Sbjct: 776 FALRDGMLDSSGGVPAQLRPPTSAHLQMNPQTGDRPSVIFLDHQG--LESPKDR--SKVN 831
Query: 502 EGEAEVAMAHAKRLI--QSGVHASDIGIITPYAAQVVLLKILRSKDDK------------ 547
+A++ + + L+ + DIG+I PY AQ+ LL L + D K
Sbjct: 832 YTDADIVCSVIEDLLIQNPDLRGEDIGVIAPYVAQIRLLTRLLTTDAKSQARFQAALGDQ 891
Query: 548 ----LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLV 603
L +++ TVDGF+GREK+ II S VRSNS VGFL+DRRR+NV +TRA+R +V
Sbjct: 892 RAMQLPQIDIKTVDGFEGREKDVIIFSTVRSNSSGHVGFLADRRRLNVGLTRAKRGLFVV 951
Query: 604 CDTETVSS------DGF------LKRLIEYFEEHAEYL 629
+ T+ + DG + E ++ +AEYL
Sbjct: 952 GNLNTLKTGRVGGVDGMNDPKTRRSKGAEAWQRYAEYL 989
>gi|395333482|gb|EJF65859.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 794
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 157/464 (33%), Positives = 244/464 (52%), Gaps = 64/464 (13%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
L+ F++ L++ E+EAEI + ++ ++KG + L GL GKTL+
Sbjct: 7 LKAFITRHRELLNKEREAEIERTSLLLSNCPPKVLEQKGLCLAGLGIASVGIGLGGKTLV 66
Query: 75 EFQSTKG----DVLPAHKFGTHDVVVLKPNKADLGSP--------------ALG---QGV 113
E + + P H D+ ++ + + +P G +GV
Sbjct: 67 ELERPAAYHSSPLFPPHTLRPGDLARIEEHTSGAAAPKKVAKTKKSGPAQKGEGDSVEGV 126
Query: 114 VYRLKDSSITVAFDDIPEEG---LNSP--LRLEKLANEVTYRRMKDALIQLSKGV----- 163
V+++ ++ I +A D PE G L+ P R+ KLAN VTY RM AL QL K V
Sbjct: 127 VFKVSETRIVIAVDP-PETGGEDLDLPDRCRVVKLANSVTYDRMIKALDQLEKVVLSNSD 185
Query: 164 --QNGPAAGLIP---VLFGEQKPT--VLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFM 216
++ L P VL G P+ V KDI F F+ +L+ SQ++AI AL S V
Sbjct: 186 VKEDKFLPKLTPLDRVLMGMAPPSERVPIKDIKF--FDGSLNPSQQEAIRFALGSPEVAC 243
Query: 217 LHGPPGTGKTTTVVEIILQEV------KRGSKILACAASNIAVDNIVERLVP-------H 263
+HGPPGTGKT T++E+I Q + ++L C ASN++VDNI+ERL+
Sbjct: 244 IHGPPGTGKTHTLIELIRQLTTVTPTNPKPLRLLVCGASNLSVDNILERLLALPAPDNGK 303
Query: 264 RVRLVRLGHPARLLPQ--VLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNT- 320
++++ R+GHPAR++ Q VLE L+ + R D ++LA D++ E++A L
Sbjct: 304 KLKVTRVGHPARVMNQEEVLEVTLEVKASRSDQAALAKDVKNELEAALDTLSGKGKGAKG 363
Query: 321 -------RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLV 373
R+++ +E++ L KE R+R+ V V+ + VVL T A R++ + FD+V
Sbjct: 364 KAPRGLERKKMWEEVKALRKEYRQRESGVVESVMSESQVVLATCHSAGGRQVRSQDFDVV 423
Query: 374 IIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKK 417
IIDEA QA+E CWI + K + ILAGD +QLPPT+ S++ ++K
Sbjct: 424 IIDEATQAVEAVCWIPIFKAQKLILAGDPMQLPPTIISIDKKEK 467
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/242 (43%), Positives = 145/242 (59%), Gaps = 23/242 (9%)
Query: 407 PTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHP 466
P ++V + L TLFERL +YG + MLTVQYRMH HI ++ SK +Y+S++K+HP
Sbjct: 548 PGPKAVLRTPRTLETTLFERLEKMYGPGIKRMLTVQYRMHAHIASFPSKVMYHSRLKSHP 607
Query: 467 S---------GVKRTSSTE-------PTLLLIDIAGCDMEEKKD---EEDSTMNEGEAEV 507
S +T S + ++ D AGC+ E+ + +E S NE EA V
Sbjct: 608 SVEAHLLRDLPNTKTDSEDDEKEILGTPVVFYDTAGCEYFERLEGDGDEGSRCNENEASV 667
Query: 508 AMAHAKRLIQSGVHASDIGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEA 566
+L +GV S I +ITPY AQV LL +LR +E+ TVDG QGREKEA
Sbjct: 668 VKMWVDQLAGAGVLPSQIAVITPYQAQVTLLTSLLRPIYGP--ELEIGTVDGMQGREKEA 725
Query: 567 IIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS-SDGFLKRLIEYFEEH 625
+IIS+VRSN K+EVGFL D+RR+NVA+TRARR C++ D+ TV FLK+ + + E +
Sbjct: 726 VIISLVRSNEKREVGFLKDKRRLNVAMTRARRHLCIIGDSSTVQHGSPFLKKWMAWLEAN 785
Query: 626 AE 627
A+
Sbjct: 786 AD 787
>gi|409047226|gb|EKM56705.1| hypothetical protein PHACADRAFT_207896 [Phanerochaete carnosa
HHB-10118-sp]
Length = 792
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 152/457 (33%), Positives = 242/457 (52%), Gaps = 61/457 (13%)
Query: 14 SLQEFVSVMAPLIDLEKEAEI--SASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGK 71
++ FV L+ E+EAEI ++ + + S +L ++KG + +L + GL GK
Sbjct: 10 NIHSFVDRHRQLLLKEREAEIERTSLLLTNCSPSL--LEQKGLALGSLGVANVSVGLGGK 67
Query: 72 TLLEFQS----TKGDVLPAHKFGTHDVVVLKPNKADLGSPALG--------------QGV 113
TL+E + + + P+H F D+ ++ + + G+ + +GV
Sbjct: 68 TLVELERPTAYSNTPLFPSHTFRPGDLARVEEHVSTSGAKKVAKTKKPTETKSSRSAEGV 127
Query: 114 VYRLKDSSITVAFD--DIPEEGLNSP--LRLEKLANEVTYRRMKDALIQLSK-------- 161
VY++ D I +A D + E L+ P R+ KLAN VTY RM+ AL L K
Sbjct: 128 VYKVSDVRIVIAIDVSESSTEDLDLPDRCRVVKLANSVTYDRMEKALDTLEKVAVGQAGD 187
Query: 162 GVQNGPAAGLIPVLFGEQKPT--VLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHG 219
G P L+ +L G +P+ +D+ F F+ L+ SQ++A+ AL S V +HG
Sbjct: 188 GKNLPPLTPLMRILLGMSEPSKKFPVQDLKF--FDDTLNPSQRNAVRFALESLEVACIHG 245
Query: 220 PPGTGKTTTVVEIILQEVKRGS------KILACAASNIAVDNIVERLVP-------HRVR 266
PPGTGKT T++E+I Q S ++L C ASN++VDNI+ERL+ +++
Sbjct: 246 PPGTGKTHTLIEVIRQMTTVTSSNPKPLRLLVCGASNLSVDNILERLLALPLPESGEKLK 305
Query: 267 LVRLGHPARLLPQ--VLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNT---- 320
+ R+GHPAR++ VL+ L+ + + D ++LA D++ E++A L
Sbjct: 306 ITRVGHPARVMANQGVLDVTLEVKAGKTDAAALAKDVKNELEAALDVLAGKGKGAKGKAP 365
Query: 321 ----RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIID 376
R+++ +E+R L KE R+R+ V V+ + VV+ T + +L N FD+VIID
Sbjct: 366 RGLERKKMWEEVRALRKEYRQRESGVVEGVLSESQVVIATCHSSGGHQLRNHEFDVVIID 425
Query: 377 EAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVE 413
EA QALE CWI + KG + ILAGD +QLPPT+ S +
Sbjct: 426 EATQALEAVCWIPIFKGKKLILAGDPMQLPPTILSAD 462
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 137/232 (59%), Gaps = 23/232 (9%)
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS--------- 467
+ L T+F+RL +YG ++ ML +QYRMH I + SK +Y++K+ +H S
Sbjct: 556 RSLETTMFDRLEKMYGPDIKRMLNIQYRMHAKIAEFPSKVMYHNKLISHASVAGHLLKDL 615
Query: 468 -GVKRTSSTEPTLLL------IDIAGCDMEEKKD---EEDSTMNEGEAEVAMAHAKRLIQ 517
S E T LL D AGC+ E+ + +E S NE EA V + L
Sbjct: 616 SNTGAASEDEETELLSTPTVFFDTAGCEYFERLEGDGDEGSRCNENEAVVVRRCIEDLAS 675
Query: 518 SGVHASDIGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNS 576
GV S I IITPY AQV LL +LR ++E+ TVDG QGREK+A+IIS+VRSN
Sbjct: 676 VGVLPSQIAIITPYQAQVSLLTSMLRPMYGP--DLEIGTVDGMQGREKDAVIISLVRSNG 733
Query: 577 KKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS-SDGFLKRLIEYFEEHAE 627
K+EVGFL D+RR+NVA+TRA+R C+V D+ TV FLK+ + + E++A+
Sbjct: 734 KREVGFLKDKRRLNVAMTRAKRYLCVVGDSSTVQHGSPFLKKWVTWLEQNAD 785
>gi|345007371|ref|YP_004810223.1| AAA ATPase [halophilic archaeon DL31]
gi|344322997|gb|AEN07850.1| AAA ATPase [halophilic archaeon DL31]
Length = 793
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/420 (34%), Positives = 209/420 (49%), Gaps = 53/420 (12%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNI 256
L+ Q +A L SK V+ +HGPPGTGKT T+ I Q + G +L A SN AVDN+
Sbjct: 384 LNEYQAEAAELCLRSKEVYCIHGPPGTGKTRTLNAIARQVIAEGGTVLMSAHSNQAVDNL 443
Query: 257 VERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK 316
L GD++ A D + AL +
Sbjct: 444 ---------------------------------LVGDSAPNAPD-EGSLHAL------AQ 463
Query: 317 DKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIID 376
D N +I + ++ Q+ + + +A++V T + A D SFDL I+D
Sbjct: 464 DPNETLDITISRVGTNSSDKVVQKHYIGESSSSANIVGATTSAA--DMFDAGSFDLAIVD 521
Query: 377 EAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT 436
EA QA A + + ILAGDH QLPP +S EAE++ + +LFE + + Y +
Sbjct: 522 EATQASIPATLVPYTCADKLILAGDHKQLPP-YKSTEAEERPIYVSLFEHMIETYDTGIQ 580
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEE 496
+ML QYRM+E I + S+ YNS ++ T EP L+ I+I G +
Sbjct: 581 TMLRRQYRMNEQIAEFPSQAFYNSSLETADRNTNWTVPGEPPLIGINIDGPESSSGT--- 637
Query: 497 DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK--ILRSKDDKLKNMEVS 554
S NE EA V K L + GV SDIGIITPY+AQ+ +K + +++ + +
Sbjct: 638 -SKKNEREARVVTKRVKALAEKGVRMSDIGIITPYSAQIPTIKQHLHNHVEERTNRITID 696
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVGFLS----DRRRMNVAVTRARRQCCLVCDTETVS 610
T+D FQG E+EAIIIS VRSN E GFL+ RR+NVA+TRA++ ++ D ET+S
Sbjct: 697 TIDAFQGSEREAIIISFVRSNDTGESGFLTLPDEGPRRLNVALTRAKKHLSIIADFETLS 756
>gi|9759443|dbj|BAB10240.1| prematurely terminated mRNA decay factor-like protein [Arabidopsis
thaliana]
Length = 1235
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/448 (32%), Positives = 233/448 (52%), Gaps = 40/448 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ +A+ K++ K + ++ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 486 LNASQVNAV-KSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 544
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + + S ++ L L + + E+ KL +
Sbjct: 545 LAEKISATGLKVVRLCAKSR---EAVSSPVEYLTLHYQVRHLDTSEKSELH----KLQQL 597
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KD+ Q EL S +E+K + L ++ ++ADV+ T GA +L N F
Sbjct: 598 KDE------QGELS--SSDEKKYKNLKRATEREITQSADVICCTCVGAADLRLSNFRFRQ 649
Query: 373 VIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDE+ QA E C I L+ G + +L GDH QL P + +A + GL ++LFERL L
Sbjct: 650 VLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVTLG 709
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---------TEPTLLLI 482
+ L VQYRMH + + S Y ++ + ++R ++ P +
Sbjct: 710 IKPIR--LQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYV 767
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+ EE S +N EA ++SGV S IG+ITPY Q +
Sbjct: 768 QLG---QEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQIGVITPYEGQRAYIVNYM 824
Query: 543 SKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
+++ L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 825 ARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 884
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEH 625
++ + + +S L+ +++EH
Sbjct: 885 YGIVILGNPKVLSKQPLWNGLLTHYKEH 912
>gi|19569060|gb|AAL92018.1| UPF1 [Arabidopsis thaliana]
Length = 1243
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 233/446 (52%), Gaps = 36/446 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ +A+ K++ K + ++ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 478 LNASQVNAV-KSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 536
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + + S ++ L L + + E+ KL +
Sbjct: 537 LAEKISATGLKVVRLCAKSR---EAVSSPVEYLTLHYQVRHLDTSEKSELH----KLQQL 589
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT-DVIKNADVVLTTLTGAVSRKLDNTSFDLVI 374
KD+ Q EL + +++ K + A ++ ++ADV+ T GA +L N F V+
Sbjct: 590 KDE------QGELSSSDEKKYKNLKRATEREITQSADVICCTCVGAADLRLSNFRFRQVL 643
Query: 375 IDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGD 433
IDE+ QA E C I L+ G + +L GDH QL P + +A + GL ++LFERL L
Sbjct: 644 IDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVTLGIK 703
Query: 434 EVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---------TEPTLLLIDI 484
+ L VQYRMH + + S Y ++ + ++R ++ P + +
Sbjct: 704 PIR--LQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYVQL 761
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSK 544
EE S +N EA ++SGV S IG+ITPY Q + ++
Sbjct: 762 G---QEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQIGVITPYEGQRAYIVNYMAR 818
Query: 545 DDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 599
+ L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 819 NGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYG 878
Query: 600 CCLVCDTETVSSDGFLKRLIEYFEEH 625
++ + + +S L+ +++EH
Sbjct: 879 IVILGNPKVLSKQPLWNGLLTHYKEH 904
>gi|30695086|ref|NP_199512.2| Regulator of nonsense transcripts 1-like protein [Arabidopsis
thaliana]
gi|88984684|sp|Q9FJR0.2|RENT1_ARATH RecName: Full=Regulator of nonsense transcripts 1 homolog; AltName:
Full=ATP-dependent helicase UPF1
gi|332008074|gb|AED95457.1| Regulator of nonsense transcripts 1-like protein [Arabidopsis
thaliana]
Length = 1254
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/448 (32%), Positives = 233/448 (52%), Gaps = 40/448 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ +A+ K++ K + ++ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 489 LNASQVNAV-KSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 547
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + + S ++ L L + + E+ KL +
Sbjct: 548 LAEKISATGLKVVRLCAKSR---EAVSSPVEYLTLHYQVRHLDTSEKSELH----KLQQL 600
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KD+ Q EL S +E+K + L ++ ++ADV+ T GA +L N F
Sbjct: 601 KDE------QGELS--SSDEKKYKNLKRATEREITQSADVICCTCVGAADLRLSNFRFRQ 652
Query: 373 VIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDE+ QA E C I L+ G + +L GDH QL P + +A + GL ++LFERL L
Sbjct: 653 VLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVTLG 712
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---------TEPTLLLI 482
+ L VQYRMH + + S Y ++ + ++R ++ P +
Sbjct: 713 IKPIR--LQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYV 770
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+ EE S +N EA ++SGV S IG+ITPY Q +
Sbjct: 771 QLG---QEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQIGVITPYEGQRAYIVNYM 827
Query: 543 SKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
+++ L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 828 ARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 887
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEH 625
++ + + +S L+ +++EH
Sbjct: 888 YGIVILGNPKVLSKQPLWNGLLTHYKEH 915
>gi|328768162|gb|EGF78209.1| hypothetical protein BATDEDRAFT_35814 [Batrachochytrium
dendrobatidis JAM81]
Length = 1119
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 165/510 (32%), Positives = 265/510 (51%), Gaps = 51/510 (10%)
Query: 147 VTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQ-KPTVLKKDIAFK---PFNSNLDHSQK 202
++ RM++A+ + +N +A + L G P VLK + + P L+HSQ
Sbjct: 430 TSFDRMQNAMKTFALD-ENSVSAYIYHRLLGHDVDPQVLKVTLPKRINAPNLPELNHSQA 488
Query: 203 DAISKALSSKNVFMLHGPPGTGKTTTVVEII--LQEVKRGSKILACAASNIAVDNIVERL 260
A+ K++ SK + ++ GPPGTGKT T I+ L + +G ++L CA SN+AVD++ ++
Sbjct: 489 TAV-KSVLSKPLSLIQGPPGTGKTVTSATIVYHLANMNKG-QVLVCAPSNVAVDHLTSKI 546
Query: 261 VPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNT 320
+++VR+ +R + LES++ L +L +D + + KL++ K+
Sbjct: 547 HKTGLKVVRVTAKSR---EALESSVSFLSLSEQVKNLDTDRQLQ------KLIRLKN--- 594
Query: 321 RREIQKELRTLSKEERKRQQL----AVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIID 376
EL LS ++ K+ + A +++++ADV+ TT GA +L SF V++D
Sbjct: 595 ------ELGELSSQDEKKYKYLFRKAEREILEHADVICTTCMGAGDSRLSKFSFRSVLVD 648
Query: 377 EAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEV 435
EA QA E C I L+ GS+ +L GDH QL P VQ +A K GL ++LFERL L +
Sbjct: 649 EATQACEPECLIPLVLGSKQVVLVGDHQQLGPVVQHKKASKAGLSQSLFERLIILGLRPI 708
Query: 436 TSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTL---------LLIDIAG 486
L VQYRMH + + S Y ++ +GV P + +I
Sbjct: 709 R--LQVQYRMHPCLSEFPSNMFYEGSLQ---NGVTVQERIRPEIDFPWPVHETPMIFYGS 763
Query: 487 CDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKILR 542
EE S +N EA + +++GV + IGI+TPY Q V ++
Sbjct: 764 FGQEEIAASGKSYLNRTEAAYVEKVVTKFLKAGVTPAQIGIVTPYEGQRAYVVQHMQFNG 823
Query: 543 S-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
S K + K +EV++VD FQGREK+ II++ VRSN + +GFL D RR+NVA+TRA+
Sbjct: 824 SLKKELYKEIEVASVDSFQGREKDYIIVTCVRSNENQGIGFLVDPRRLNVALTRAKYGLV 883
Query: 602 LVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + ++ +L+ F EH+ + G
Sbjct: 884 IVGNPKVLAKHPLWYQLLMTFREHSCLVEG 913
>gi|340504626|gb|EGR31053.1| upf1 regulator of nonsense transcripts, putative [Ichthyophthirius
multifiliis]
Length = 928
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 153/456 (33%), Positives = 231/456 (50%), Gaps = 38/456 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII---LQEVKRGSK---ILACAASN 250
L++ Q +A+ KAL + ++ GPPGTGKT T II +Q +KR + IL CA SN
Sbjct: 320 LNYYQVEAVKKALQQP-LCLIQGPPGTGKTFTSTAIIYHLVQNIKRTGQRGQILVCAPSN 378
Query: 251 IAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG 310
I VD + ER+ +++VR+ +R +++ S+++ L SL +EM+
Sbjct: 379 IVVDQLAERMHYAGLKVVRMCSKSR---EMVSSSVEFLTLHNQVRSLGHGEYEEMQ---- 431
Query: 311 KLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
KLL + + Q E S KRQ ++++NA+V+ +T + +L F
Sbjct: 432 KLLTLMEDQGELDHQDEDVYYS---LKRQ--GEKEILQNAEVICSTCISSADPRLKEFRF 486
Query: 371 DLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
V+IDEA QA+E C + LLKG++ IL GDH QL P V + GL ++LFERL
Sbjct: 487 KHVLIDEATQAIEPECLLPLLKGAKHAILVGDHRQLGPVVTCRDTANAGLNKSLFERLVS 546
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKI--------KAHPSGVKRTSSTEPTLLL 481
+ G T L VQYRMH + + S Y + + + +P + L
Sbjct: 547 M-GVRPTR-LQVQYRMHPDLSIFPSNTFYEGTLLNGVTFNDRQFHGDFPWPNKNKPLMFL 604
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL 541
C +EE S +N E + +LI+ V IGIITPY Q +
Sbjct: 605 ---NSCGVEEISSSGTSYLNRQETMLIEEIVYKLIKGKVRPDQIGIITPYKGQRFYIGDY 661
Query: 542 RSKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
K+ KL + +E +VDGFQGREK+ IIIS VRSN + +GFL+D RR+NVA+TRA
Sbjct: 662 LQKNGKLNPTLYQEIECCSVDGFQGREKDYIIISCVRSNESQGIGFLTDARRLNVAITRA 721
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
R +V + + ++ D L+ + +E + G+
Sbjct: 722 RYGLIIVGNAKVLARDNLWNNLLNFMKESKVLVDGN 757
>gi|403337792|gb|EJY68119.1| hypothetical protein OXYTRI_11366 [Oxytricha trifallax]
Length = 1153
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 155/456 (33%), Positives = 235/456 (51%), Gaps = 34/456 (7%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+H Q +A+ KAL + + ++ GPPGTGKT T ++ VK+ K+L CA SNIAVD
Sbjct: 561 LNHFQMNAVKKALITP-LCLIQGPPGTGKTVTSTTLVTHLVKQKMGKVLVCAPSNIAVDQ 619
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ +++ +++VR+ +R + + S +D L L+ K M+ L +LK
Sbjct: 620 LTDKINSTGIKVVRMCARSR---ESVSSNVDYLSLHEQIKYLSHGPFKLMQEL---ILKK 673
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVII 375
+++N E KE R L +E KRQ A +++KNA+V+ TT A R+L N F V+I
Sbjct: 674 EEQNELTE--KEERQL--KELKRQ--AEDEILKNAEVICTTCVAAFDRRLRNFKFSQVLI 727
Query: 376 DEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDE 434
DEA QA E I +L+G++ IL GDH QL P + +A K GL ++LFERL L
Sbjct: 728 DEATQATEPETLIPILRGAKHVILVGDHCQLGPVIMCKKAAKAGLNQSLFERLVCLGIRP 787
Query: 435 VTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR---------TSSTEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ S R +S +P + I+
Sbjct: 788 IR--LQVQYRMHPVLSAFPSMTFYEGSLQNGISKQDRILSDFKFQWPASEKPMMFYHSIS 845
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKD 545
EE S +N EA A + ++ + IGIITPY Q + +
Sbjct: 846 N---EEISASGTSFLNRQEAYNVEALVTQFLKFDLKPEQIGIITPYEGQKAFITSYMQRS 902
Query: 546 DKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
+L K +EV++VD FQGREK+ I++S VRSN +GFL+D RR+NVA+TRA+
Sbjct: 903 GQLDPSLYKEIEVASVDSFQGREKDFILLSCVRSNEASGIGFLNDPRRLNVALTRAKYGL 962
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLN 636
+ + + +S L+ F+ + G N
Sbjct: 963 VIFGNAKVLSKHDLWNNLLNEFKNQGCLVEGPNIFN 998
>gi|321253648|ref|XP_003192804.1| ATP-dependent RNA helicase of the SFI superfamily Nam7p
[Cryptococcus gattii WM276]
gi|317459273|gb|ADV21017.1| ATP-dependent RNA helicase of the SFI superfamily Nam7p
[Cryptococcus gattii WM276]
Length = 1097
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 155/476 (32%), Positives = 246/476 (51%), Gaps = 45/476 (9%)
Query: 178 EQKPTVLKKDIAFK---PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIIL 234
E +P VL+ + + P L+HSQ A+ KA+ K + ++ GPPGTGKT T I+
Sbjct: 431 EVEPQVLRTQMPKRFAAPNLPELNHSQMSAV-KAVLQKPLSLIQGPPGTGKTVTSASIVY 489
Query: 235 QEVKRG-SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGD 293
K ++L CA SN+AVD++ E++ +++VRL +R + L+S++D L
Sbjct: 490 HLAKMNPGQVLVCAPSNVAVDHLCEKIHQTGLKVVRLAAKSR---EALDSSVDFLSLHSQ 546
Query: 294 NSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNA 350
++ +D E++ KL++ ++ Q EL +ERK + L D++ A
Sbjct: 547 VAN--ADTHHELQ----KLIQLRND------QGELS--QSDERKYKALVRACEKDILNAA 592
Query: 351 DVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTV 409
DV+ TT GA +L F V+IDEA Q+ E C I L+ G + +L GDH QL P +
Sbjct: 593 DVICTTCVGAGDPRLAKFKFRTVLIDEATQSAEPECMIPLVMGCKQAVLVGDHQQLGPVI 652
Query: 410 QSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGV 469
+ +A + GL ++LFERL L + L VQYRMH + +SS Y ++ +
Sbjct: 653 MNKKAARAGLSQSLFERLVILGNHPIR--LQVQYRMHPCLSEFSSNLFYEGTLQNGVTAP 710
Query: 470 KR---------TSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGV 520
+R + P ++ EE S +N EA + +SGV
Sbjct: 711 ERLRKNVDFPWPVADTPMFFHQNLG---TEEISSSGTSFLNRTEASNVEKMVTKFFKSGV 767
Query: 521 HASDIGIITPYAAQ----VVLLKILRS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSN 575
+ IG+ITPY Q +++ S K D K +EV++VD FQGREK+ II+S VRSN
Sbjct: 768 LPNQIGVITPYEGQRSYIASYMQLHGSLKKDLYKEVEVASVDAFQGREKDYIILSCVRSN 827
Query: 576 SKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+ +GFL+D RRMNVA+TRA+ ++ + + +S L+ +++E ++ G
Sbjct: 828 EHQGIGFLNDPRRMNVALTRAKYGVVILGNPKVLSKHPLWLYLLSHYKEKGCFVEG 883
>gi|302422300|ref|XP_003008980.1| ATP-dependent helicase NAM7 [Verticillium albo-atrum VaMs.102]
gi|261352126|gb|EEY14554.1| ATP-dependent helicase NAM7 [Verticillium albo-atrum VaMs.102]
Length = 1041
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 190/652 (29%), Positives = 312/652 (47%), Gaps = 98/652 (15%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
++ +V PL+ +E + + + L AQ + + GL GK L F
Sbjct: 246 QYQNVFGPLVKMESDYD----------KKLKEAQSEDGLQIRW-----DYGLNGKHLASF 290
Query: 77 QSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS---SITVAF---- 126
+ K GDV K D + L+ K +L G G V ++ ++ +T+
Sbjct: 291 ELHKIESGDV----KLAVGDEMRLR-YKGELRPAWEGVGYVIKIPNNHSDEVTLELRKAG 345
Query: 127 --DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVL 184
+P E ++ + + +Y RM+ A+ + V + +G I +L
Sbjct: 346 NEKTVPTECTHN-FSADYVWKATSYDRMQLAMKTFA--VDDNSVSGFI-------VHKLL 395
Query: 185 KKDIAFKPFNS------------NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEI 232
+D+A P + +L+ SQ AI KA+ + ++ GPPGTGKT T I
Sbjct: 396 GRDVAVAPMKTAMPKKFTAPGLPDLNQSQISAI-KAVLQTPLSLIQGPPGTGKTVTSATI 454
Query: 233 ILQEVKR-GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLR 291
I K G ++L CA SN+AVD + ER+ +++VRL +R + +ES++
Sbjct: 455 IYHLAKSSGGQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSR---EDVESSV------ 505
Query: 292 GDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVI 347
S LA + M NG+L+K +++ EL LS ++E+K +QL A D++
Sbjct: 506 ---SFLALHEQVRMNDSNGELVKLA------QLKTELGELSSQDEKKFKQLTKAAERDIL 556
Query: 348 KNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLP 406
NADVV T GA +L F V+IDE+ Q+ E C I L+ G + +L GDH QL
Sbjct: 557 HNADVVCCTCVGAGDPRLSKIKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLG 616
Query: 407 PTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK--- 463
P + + +A K GL ++LFERL +L + L QYRMH + + S Y+ ++
Sbjct: 617 PVIMNKKAAKAGLNQSLFERLVNLRLQPI--RLNTQYRMHPCLSEFPSNMFYDGSLQNGV 674
Query: 464 AHPSGVKR------TSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQ 517
H ++R + P + ++ EE S +N EA R +
Sbjct: 675 THAQRLRRDVDFPWPVADTPMMFWSNLGN---EEISASGTSYLNRTEASNVEKVVTRFFK 731
Query: 518 SGVHASDIGIITPYAAQ-VVLLKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMV 572
+GV DIG+ITPY Q ++ +++ K + K +EV++VD FQGREK+ I++S V
Sbjct: 732 AGVKPQDIGVITPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCV 791
Query: 573 RSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
RS+ + +GFLSD RR+NV +TRA+ ++ + + +S L+ +F++
Sbjct: 792 RSSDNQGIGFLSDPRRLNVGLTRAKYGLVILGNPKVLSKHELWHHLLVHFKD 843
>gi|82915224|ref|XP_729015.1| nonsense mRNA reducing factor 1 [Plasmodium yoelii yoelii 17XNL]
gi|23485801|gb|EAA20580.1| nonsense mRNA reducing factor 1-related [Plasmodium yoelii yoelii]
Length = 1297
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 148/440 (33%), Positives = 240/440 (54%), Gaps = 41/440 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII--LQEVKRGSKILACAASNIAVD 254
L+HSQ DAI K+L+S + ++ GPPGTGKT T ++ + + K G K+L A SN+AVD
Sbjct: 666 LNHSQIDAIKKSLNSP-LSLIQGPPGTGKTLTCATLVYHMHKTKMGGKVLVTAPSNVAVD 724
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
+ R+ +++VRL +R + + S D L L +D+ +E+ KLL
Sbjct: 725 QLSVRIHRTGLKVVRLCARSR---ESVSSIADYLYLHNQVKLLKTDVGEEL----NKLL- 776
Query: 315 TKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
E+++E+ LS K+E + ++L A ++ ADV+ TT GA+ ++L F
Sbjct: 777 --------ELKEEVGELSQKDENRLKKLILHAEYKILTEADVICTTCVGAMDKRLKRFRF 828
Query: 371 DLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
+ V+IDEA Q+ E C + ++ G++ +L GDH QL P + +A GLG++LFERL
Sbjct: 829 NQVLIDEATQSTEPECLVPIVTGAKQIVLVGDHCQLGPIIVCKKAASSGLGKSLFERLVM 888
Query: 430 LYGDEVTSM-LTVQYRMHEHIMNWSSKQLYNS--------KIKAHPSGVKRTSSTEPTLL 480
L +T L VQYRMH + + S Y+ K + +P +++ +
Sbjct: 889 L---GITPFRLEVQYRMHPCLSEFPSYVFYDGCLQNGITLKEREYPLKNFPWPNSKYPMF 945
Query: 481 LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKI 540
+ G +EE S +N EA+ + L+ +G+ A+ IG+ITPY Q +
Sbjct: 946 FYNSNG--LEEMSASGTSYLNRNEAQNMEVLVRALLNAGLKATQIGVITPYEGQRAYITS 1003
Query: 541 LRSKDDKLK---NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
L K+ + ++EV++VD FQGREK+ I++S VRSN K +GFL+D RR+NVA+TRA+
Sbjct: 1004 LFQKNISYQHCLDIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAK 1063
Query: 598 RQCCLVCDTETVSSDGFLKR 617
+ + + +S F+ +
Sbjct: 1064 YGLIICGNAKVLSRQHFISK 1083
>gi|346970142|gb|EGY13594.1| ATP-dependent helicase NAM7 [Verticillium dahliae VdLs.17]
Length = 1099
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 190/652 (29%), Positives = 312/652 (47%), Gaps = 98/652 (15%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
++ +V PL+ +E + + + L AQ + + GL GK L F
Sbjct: 276 QYQNVFGPLVKMESDYD----------KKLKEAQSEDGLQIRW-----DYGLNGKHLASF 320
Query: 77 QSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS---SITVAF---- 126
+ K GDV K D + L+ K +L G G V ++ ++ +T+
Sbjct: 321 ELHKIESGDV----KLAVGDEMRLR-YKGELRPAWEGVGYVIKIPNNHSDEVTLELRKAG 375
Query: 127 --DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVL 184
+P E ++ + + +Y RM+ A+ + V + +G I +L
Sbjct: 376 NEKTVPTECTHN-FSADYVWKATSYDRMQLAMKTFA--VDDNSVSGFI-------VHKLL 425
Query: 185 KKDIAFKPFNS------------NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEI 232
+D+A P + +L+ SQ AI KA+ + ++ GPPGTGKT T I
Sbjct: 426 GRDVAVAPMKTAMPKKFTAPGLPDLNQSQISAI-KAVLQTPLSLIQGPPGTGKTVTSATI 484
Query: 233 ILQEVKR-GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLR 291
I K G ++L CA SN+AVD + ER+ +++VRL +R + +ES++
Sbjct: 485 IYHLAKSSGGQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSR---EDVESSV------ 535
Query: 292 GDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVI 347
S LA + M NG+L+K +++ EL LS ++E+K +QL A D++
Sbjct: 536 ---SFLALHEQVRMNDSNGELVKLA------QLKTELGELSSQDEKKFKQLTKAAERDIL 586
Query: 348 KNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLP 406
NADVV T GA +L F V+IDE+ Q+ E C I L+ G + +L GDH QL
Sbjct: 587 HNADVVCCTCVGAGDPRLSKIKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLG 646
Query: 407 PTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK--- 463
P + + +A K GL ++LFERL +L + L QYRMH + + S Y+ ++
Sbjct: 647 PVIMNKKAAKAGLNQSLFERLVNLRLQPI--RLNTQYRMHPCLSEFPSNMFYDGSLQNGV 704
Query: 464 AHPSGVKR------TSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQ 517
H ++R + P + ++ EE S +N EA R +
Sbjct: 705 THAQRLRRDVDFPWPVADTPMMFWSNLGN---EEISASGTSYLNRTEASNVEKVVTRFFK 761
Query: 518 SGVHASDIGIITPYAAQ-VVLLKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMV 572
+GV DIG+ITPY Q ++ +++ K + K +EV++VD FQGREK+ I++S V
Sbjct: 762 AGVKPQDIGVITPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCV 821
Query: 573 RSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
RS+ + +GFLSD RR+NV +TRA+ ++ + + +S L+ +F++
Sbjct: 822 RSSDNQGIGFLSDPRRLNVGLTRAKYGLVILGNPKVLSKHELWHHLLVHFKD 873
>gi|412993880|emb|CCO14391.1| predicted protein [Bathycoccus prasinos]
Length = 1285
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 176/533 (33%), Positives = 257/533 (48%), Gaps = 107/533 (20%)
Query: 136 SPLRLEKLANEVTYRRMKDALIQLSK-----GVQNGPAAGLIPVLF-------------- 176
S R++KLAN +Y R +AL L + G + G G+ +L
Sbjct: 636 SGWRVDKLANRTSYLRQLNALQDLMEMKGPVGNKAGVDPGIRDILLAGWDNNKKAIESIP 695
Query: 177 --------GEQKPTVLKK---DIAFK-PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTG 224
GE K+ D+A P +++ SQ +A+ AL + + ++ GPPGTG
Sbjct: 696 DLCAAELNGETMHAATKQRMLDMAQDIPAMQHMNKSQHEALRAALFQR-ITLIQGPPGTG 754
Query: 225 KTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPAR----LLPQ 279
KT T V ++ +K R IL + SNIAVDN+V+ L VR+ R+G P L+P
Sbjct: 755 KTHTAVALVQMWLKCRTMPILCTSDSNIAVDNLVDGLSRAGVRVARIGRPEAVRQDLMPF 814
Query: 280 VLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQ 339
++ES A + G N S + +Q
Sbjct: 815 MVESI--AGIEPGSNMS---------------------------------------KDQQ 833
Query: 340 QLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CIL 398
A+ V++ A+V+ T GA S L+ SF +IDEA QA E A + + KG + +L
Sbjct: 834 YQAINGVLRRAEVICATCAGAGSDILERFSFAACLIDEATQATEPATVVPMTKGCKQIVL 893
Query: 399 AGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLY 458
GD QLPPT+ S +A+++GLG +LFER+ L T ML VQYRMH I + S+Q Y
Sbjct: 894 IGDQNQLPPTIISRDADERGLGTSLFERM--LSRGIRTFMLKVQYRMHPAIAKFPSQQFY 951
Query: 459 NSKI--------KAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMA 510
++++ + P G P L +D C E++ + S MN EA+ +
Sbjct: 952 SNELLSGTPPSQRRAPQGFDWPVPAVP-LAFVD---CPEGEERSDGASQMNTIEAQKVVT 1007
Query: 511 HAKRLI-QSGVHASDIGIITPYAAQVVLLKILRSKD-------------DKLKNMEVSTV 556
K+L+ + V A DIGI++PYAAQV +K L + D +EV ++
Sbjct: 1008 LVKKLMAEHEVLACDIGIVSPYAAQVRAIKKLLQPNAVKRTRFDAPAAPDSDAAIEVCSI 1067
Query: 557 DGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
DGFQGREKE I+ S R+N VGFL+DRRR+NV +TRARR +V T+
Sbjct: 1068 DGFQGREKEVIVFSCTRANLMGNVGFLADRRRVNVMLTRARRGLIIVGHLRTL 1120
>gi|297794533|ref|XP_002865151.1| low-level beta-amylase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297310986|gb|EFH41410.1| low-level beta-amylase 1 [Arabidopsis lyrata subsp. lyrata]
Length = 1253
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 146/448 (32%), Positives = 233/448 (52%), Gaps = 40/448 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ +A+ K++ K + ++ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 489 LNASQVNAV-KSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 547
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + + S ++ L L + + E+ KL +
Sbjct: 548 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELH----KLQQL 600
Query: 316 KDKNTRREIQKELRTLSKEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KD+ Q EL S +E+K + L ++ ++ADV+ T GA +L N F
Sbjct: 601 KDE------QGELS--SSDEKKYKNLKRQTEREITQSADVICCTCVGAADLRLSNFRFRQ 652
Query: 373 VIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDE+ QA E C I L+ G + +L GDH QL P + +A + GL ++LFERL L
Sbjct: 653 VLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 712
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---------TEPTLLLI 482
+ L VQYRMH + + S Y ++ + ++R ++ P +
Sbjct: 713 IKPIR--LQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYV 770
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+ EE S +N EA ++SGV S IG+ITPY Q +
Sbjct: 771 QLG---QEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQIGVITPYEGQRAYIVNYM 827
Query: 543 SKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
+++ L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 828 ARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 887
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEH 625
++ + + +S L+ +++EH
Sbjct: 888 YGIVILGNPKVLSKQPLWNGLLTHYKEH 915
>gi|449511522|ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis
sativus]
Length = 1268
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 149/448 (33%), Positives = 232/448 (51%), Gaps = 40/448 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ A+ K++ K + ++ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 483 LNASQVFAV-KSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 541
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + + S ++ L L + R E+ KL +
Sbjct: 542 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSERSELH----KLQQL 594
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KD+ Q EL S +E+K + L ++ ++ADV+ T GA +L N F
Sbjct: 595 KDE------QGELS--SSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQ 646
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDE+ QA E C I L+ G++ +L GDH QL P + +A + GL ++LFERL L
Sbjct: 647 VLIDESTQATEPECLIPLVLGAKQAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 706
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---------TEPTLLLI 482
+ L VQYRMH + + S Y ++ + +R S+ P +
Sbjct: 707 VKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYV 764
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+ EE S +N EA ++SGV S IG+ITPY Q +
Sbjct: 765 QMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYM 821
Query: 543 SKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
S++ L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 822 SRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 881
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEH 625
++ + + +S L+ +++EH
Sbjct: 882 YGIVILGNPKVLSKQPLWNSLLTHYKEH 909
>gi|449546124|gb|EMD37094.1| hypothetical protein CERSUDRAFT_155577 [Ceriporiopsis subvermispora
B]
Length = 803
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 157/476 (32%), Positives = 237/476 (49%), Gaps = 77/476 (16%)
Query: 11 SAVSLQEFVSVMAPLIDLEKEAEISAS---ITSGASRNLDTAQKKGSTILNLKCVDAQTG 67
S L+ F+ L+ E+EAE+ + +++ R L ++KG + L G
Sbjct: 3 SDADLRAFIVRHRQLLAREREAEVERTSLLLSNCGPRVL---EQKGLALGGLGIASVNIG 59
Query: 68 LMGKTLLEFQSTKG----DVLPAHKFGTHDVVVLKPNKADLGS---PALG---------- 110
L GKTL+E + + P+H D+ ++ N + PA G
Sbjct: 60 LGGKTLVELERPTAYHSTPIFPSHTLRPGDLARIEENVSPASGARKPAKGKKPISGNADS 119
Query: 111 ------QGVVYRLKDSSITVAFD--------DIPEEGLNSPLRLEKLANEVTYRR--MKD 154
+GVVY+L D I +A + D+PE R+ KLAN VTY R M
Sbjct: 120 QRSGGVEGVVYKLSDVRIVIAVNPSESSEDLDLPER-----CRVVKLANSVTYDRRVMDK 174
Query: 155 ALIQLSKGVQNGPA----------AGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDA 204
A+ QL K V G A LI VL G P+ K F+ +L+ SQK+A
Sbjct: 175 AIDQLEKLVLPGDAPSTDKSLPKVTNLIHVLMGMSAPSEKMPIKGLKFFDDSLNESQKEA 234
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV------KRGSKILACAASNIAVDNIVE 258
+ AL S V +HGPPGTGKT T++E+I Q + ++L C ASN++VDNI+E
Sbjct: 235 VKFALESPEVACIHGPPGTGKTHTLIEVIRQMTTATPSNPKSLRLLVCGASNLSVDNILE 294
Query: 259 RLVP-------HRVRLVRLGHPARLLPQ--VLESALDAQVLRGDNSSLASDIRKEMKALN 309
RL+ ++++ R+GHPAR++ VL+S L+ + R + ++LA D++ E++A
Sbjct: 295 RLLALPAPQNGEKLKVTRIGHPARVMAHEGVLDSTLEVKASRSEQAALAKDVKNELEAAL 354
Query: 310 GKLLKTKDKNT--------RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAV 361
L R++I +E++ L KE R+R+ V V+ + VVL T +
Sbjct: 355 DVLSGKGKGVKGKAPRGAERKKIWEEVKALRKEYRQRESGVVESVLSESQVVLATCHSSG 414
Query: 362 SRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKK 417
R++ N FD+VIIDEA QA+E CWI + K + ILAGD +QLPPT+ S + K
Sbjct: 415 GRQIRNHEFDVVIIDEATQAVEAVCWIPIFKAKKLILAGDPMQLPPTIISAGSNGK 470
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 137/231 (59%), Gaps = 21/231 (9%)
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTE 476
K L TLF+RL ++YG + ML VQYRMH I + SK +Y+ ++ +HPS
Sbjct: 567 KTLETTLFDRLENMYGPGIKRMLNVQYRMHAQIAAFPSKTMYHGRLASHPSVSSHLLRDL 626
Query: 477 PT----------------LLLIDIAGCDMEEKKD---EEDSTMNEGEAEVAMAHAKRLIQ 517
P ++ D AGC+ E+ + +E S NE EA V ++L+
Sbjct: 627 PNAKAESEEDEKEILATPVVFFDTAGCEYFERVEGDGDEGSRCNENEATVVKNWIEQLVG 686
Query: 518 SGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSK 577
+GV AS I IITPY AQV L L + ++E+ TVDG QGREK+A+IIS+VRSN K
Sbjct: 687 AGVLASQIAIITPYQAQVALFTTLL-RPAYGPDLEIGTVDGMQGREKDAVIISLVRSNEK 745
Query: 578 KEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE 627
+EVGFL D+RR+NVA+TRA+R C+V D+ TV G FLK+ + + E +A+
Sbjct: 746 REVGFLKDKRRLNVAMTRAKRHLCIVGDSSTVQHGGPFLKKWMSWLEANAD 796
>gi|449464902|ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
homolog [Cucumis sativus]
Length = 1246
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 149/448 (33%), Positives = 232/448 (51%), Gaps = 40/448 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ A+ K++ K + ++ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 483 LNASQVFAV-KSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 541
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + + S ++ L L + R E+ KL +
Sbjct: 542 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSERSELH----KLQQL 594
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KD+ Q EL S +E+K + L ++ ++ADV+ T GA +L N F
Sbjct: 595 KDE------QGELS--SSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQ 646
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDE+ QA E C I L+ G++ +L GDH QL P + +A + GL ++LFERL L
Sbjct: 647 VLIDESTQATEPECLIPLVLGAKQAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 706
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---------TEPTLLLI 482
+ L VQYRMH + + S Y ++ + +R S+ P +
Sbjct: 707 VKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYV 764
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+ EE S +N EA ++SGV S IG+ITPY Q +
Sbjct: 765 QMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYM 821
Query: 543 SKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
S++ L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 822 SRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 881
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEH 625
++ + + +S L+ +++EH
Sbjct: 882 YGIVILGNPKVLSKQPLWNSLLTHYKEH 909
>gi|410924491|ref|XP_003975715.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Takifugu rubripes]
Length = 1122
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 193/652 (29%), Positives = 307/652 (47%), Gaps = 77/652 (11%)
Query: 17 EFVSVMAPLIDLE-------KEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLM 69
++ ++ PL+ LE KE++ +IT L+ KK L D+ T +
Sbjct: 278 QYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN---KKRIAYFTLPKTDSGTFYL 334
Query: 70 GKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS--------- 120
T ++P + D + L+ K DL P G G V ++ D+
Sbjct: 335 IIT----------IIPDMRLMQGDEICLR-YKGDLAPPWKGIGHVIKVPDNYGDEIAIEL 383
Query: 121 -SITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGE 178
S A +IP +++ + ++ RM+ AL + V +G I L G
Sbjct: 384 RSSAGAPVEIPHN-----FQVDFVWKSTSFDRMQSALKTFA--VDETSVSGYIYHKLLGH 436
Query: 179 QKPTVLKKDIAFKPFNS----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIIL 234
+ V+ K K F + +L+HSQ A+ K + + + ++ GPPGTGKT T I+
Sbjct: 437 EVEDVVIKCQLPKRFTAQGLPDLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVY 495
Query: 235 QEVKRGS-KILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGD 293
++GS +L CA SNIAVD + E++ +++VRL +R + ++S + L
Sbjct: 496 HLARQGSGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSR---EAIDSPVSFLALHNQ 552
Query: 294 NSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKR--QQLAVTDVIKNAD 351
++ S M L KL + KD+ EL + S E+R R ++ A +++ NAD
Sbjct: 553 TRNMES-----MPELQ-KLQQLKDET------GELSS-SDEKRYRALRRTAERELLMNAD 599
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQ 410
V+ T GA +L F ++IDE+ QA E C + ++ G++ IL GDH QL P V
Sbjct: 600 VICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVM 659
Query: 411 SVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK 470
+A K GL ++LFERL L + L VQYRMH + + S Y ++ +
Sbjct: 660 CKKAAKAGLSQSLFERLVVLGIRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAAD 717
Query: 471 RTSS------TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD 524
R +P + EE S +N EA RL+++G
Sbjct: 718 RVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQ 777
Query: 525 IGIITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKE 579
IGIITPY Q V ++ S KL + +E+++VD FQGREK+ II+S VR+N +
Sbjct: 778 IGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQG 837
Query: 580 VGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+GFL+D RR+NVA+TRAR +V + + +S L+ Y++E + G
Sbjct: 838 IGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 889
>gi|407400115|gb|EKF28555.1| regulator of nonsense transcripts 1, putative,nonsense mRNA
reducing factor 1, putative [Trypanosoma cruzi
marinkellei]
Length = 839
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 154/447 (34%), Positives = 231/447 (51%), Gaps = 34/447 (7%)
Query: 195 SNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAV 253
SNL+ SQ A+ AL + + ++ GPPGTGKT+T V I+ + +R S+IL CA SN+AV
Sbjct: 381 SNLNSSQDAAVRTALRNP-LTLIQGPPGTGKTSTSVAIVRELHRRTHSQILVCAPSNVAV 439
Query: 254 DNIVERLVPHRVRLVRL-GHPARLLPQVLES-ALDAQVLRGDNSSLASDIRKEM--KALN 309
D + ER+ ++ VRL H ++P ++ LD+QV SS + K++ L
Sbjct: 440 DQLAERISATGLKTVRLQAHYREVVPSSVKHLGLDSQVEEFIASSNGNRTLKQLLDMRLA 499
Query: 310 GKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS 369
GK L +D + +++ + ++ ADV+ T GA R+L
Sbjct: 500 GKALGEQDIKVYNDGVRDIEEM--------------LLGGADVICCTCIGAADRRLGKMR 545
Query: 370 FDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
F V+IDEA Q E + L++G++ L GDH QL P V S+ E+ GL R+LFERL
Sbjct: 546 FQYVLIDEATQGTEPETLVPLVRGAKQVFLLGDHCQLRPIVFSLPVERAGLRRSLFERL- 604
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS-----TEPTLLLID 483
L L VQYRMH + + S Q Y ++ + +R +S +PT +
Sbjct: 605 -LLTGHRAVRLDVQYRMHPALSLFPSDQFYEGTLQNGLTEEQRDASQVFPWPDPTRPIFF 663
Query: 484 IAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG-VHASDIGIITPYAAQV-----VL 537
EE S +N EA + +LIQ G V DIG+ITPY Q L
Sbjct: 664 YNTTGSEEVSANGSSYLNRAEAALTERIITKLIQDGKVKPDDIGVITPYGGQCRYLMNYL 723
Query: 538 LKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
L+ +++EVS+VD FQGREKE II+S VRSN ++ +GF+ D RR+NV++TRA+
Sbjct: 724 LRCGPLPKTAYESVEVSSVDAFQGREKEFIILSCVRSNHRQGIGFVVDWRRLNVSITRAK 783
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEE 624
R ++ + + +S L+ + E
Sbjct: 784 RGLIIMGNVQLLSRYPVWHALLAHLME 810
>gi|339252438|ref|XP_003371442.1| hypothetical protein Tsp_11650 [Trichinella spiralis]
gi|316968330|gb|EFV52623.1| hypothetical protein Tsp_11650 [Trichinella spiralis]
Length = 650
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 155/450 (34%), Positives = 237/450 (52%), Gaps = 34/450 (7%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+HSQ A+ + L+ +++ ++ GPPGTGKT T I+ K RG+ IL C+ SN+A+D
Sbjct: 174 LNHSQVMAVREVLT-RSISLIQGPPGTGKTVTSASIVYHLAKARGTPILVCSPSNVAIDQ 232
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKLL 313
+ E++ +R++R +R +D+ V +L +R+ E + L GKLL
Sbjct: 233 LAEKISRTGLRVIRTCAKSR-------EKIDSPV---GFLTLHQQVRRLVEKEEL-GKLL 281
Query: 314 KTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLV 373
+ K++ +E R S + + ++L +K ADV+ T A +L F V
Sbjct: 282 QVKEETGELSPVEENRFSSLKLKYEREL-----LKKADVICCTCVAAGDSRLAAIKFRAV 336
Query: 374 IIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG 432
+IDE+ QA E C I ++ G+R +L GDH QL P V EA + GL R+LFERL L
Sbjct: 337 LIDESTQAKEPECLIPIVTGARQVVLVGDHCQLGPVVICEEAARAGLNRSLFERLVILGN 396
Query: 433 DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT------SSTEPTLLLIDIAG 486
+ L VQYRMH + S Y ++ + +R PT+ +
Sbjct: 397 QPIR--LQVQYRMHPLLSLLPSNLFYEGTLQNGVTEQERILEAGDFRWPNPTVPMFFWCT 454
Query: 487 CDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQV--VLLKILRSK 544
EEK S +N EA A + ++SGV A IGIITPY AQ ++ +L S
Sbjct: 455 LSQEEKPRSGKSFLNRAEAAHIEKIATKFLRSGVRADQIGIITPYEAQRAHIVKHMLHSG 514
Query: 545 --DDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
++KL + +EV++VD FQGREK+ I++S VRSN ++GFL+D RR+NVA+TRAR
Sbjct: 515 PLNNKLYQEIEVASVDAFQGREKDIILLSCVRSNKDNKIGFLNDSRRLNVALTRARYGLI 574
Query: 602 LVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ + E+ L G
Sbjct: 575 IVGNPKVLSHQPMWNSLLRFCRENHCLLHG 604
>gi|58264876|ref|XP_569594.1| ATP dependent helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|57225826|gb|AAW42287.1| ATP dependent helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1090
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 154/476 (32%), Positives = 246/476 (51%), Gaps = 45/476 (9%)
Query: 178 EQKPTVLKKDIAFK---PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIIL 234
E +P VL+ + + P L+HSQ A+ KA+ K + ++ GPPGTGKT T I+
Sbjct: 431 EVEPQVLRTQMPKRFAAPNLPELNHSQMSAV-KAVLQKPLSLIQGPPGTGKTVTSASIVY 489
Query: 235 QEVKRG-SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGD 293
K ++L CA SN+AVD++ E++ +++VRL +R + L+S++D L
Sbjct: 490 HLAKMNPGQVLVCAPSNVAVDHLCEKIHQTGLKVVRLAAKSR---EALDSSVDFLSLHSQ 546
Query: 294 NSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNA 350
++ +D E++ KL++ ++ Q EL +ERK + L D++ A
Sbjct: 547 VAN--ADTHHELQ----KLIQLRND------QGELS--QSDERKYKALVKACEKDILNAA 592
Query: 351 DVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTV 409
DV+ TT GA +L F V+IDEA Q+ E C I L+ G + +L GDH QL P +
Sbjct: 593 DVICTTCVGAGDPRLAKFKFRTVLIDEATQSAEPECMIPLVMGCKQAVLVGDHQQLGPVI 652
Query: 410 QSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGV 469
+ +A + GL ++LFERL L + L VQYRMH + +SS Y ++ +
Sbjct: 653 MNKKAARAGLSQSLFERLVILGNHPIR--LQVQYRMHPCLSEFSSNLFYEGTLQNGVTAP 710
Query: 470 KR---------TSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGV 520
+R + P ++ EE S +N EA + +SGV
Sbjct: 711 ERLRKHVDFPWPVADTPMFFHQNLG---TEEISSSGTSFLNRTEASNVEKMVTKFFKSGV 767
Query: 521 HASDIGIITPYAAQ----VVLLKILRS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSN 575
+ IG+ITPY Q +++ S K D K +EV++VD FQGREK+ II+S VRSN
Sbjct: 768 LPNQIGVITPYEGQRSYIASYMQLHGSLKKDLYKEVEVASVDAFQGREKDYIILSCVRSN 827
Query: 576 SKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+ +GFL+D RR+NVA+TRA+ ++ + + +S L+ +++E ++ G
Sbjct: 828 EHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWLYLLSHYKEKGCFVEG 883
>gi|71417104|ref|XP_810474.1| regulator of nonsense transcripts 1 [Trypanosoma cruzi strain CL
Brener]
gi|70875009|gb|EAN88623.1| regulator of nonsense transcripts 1, putative [Trypanosoma cruzi]
Length = 839
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 156/423 (36%), Positives = 225/423 (53%), Gaps = 38/423 (8%)
Query: 195 SNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQ-EVKRGSKILACAASNIAV 253
SNL+ SQ A+ AL + + ++ GPPGTGKT+T V I+L+ ++ S+IL CA SN+AV
Sbjct: 381 SNLNSSQDTAVRTALRNP-LTLIQGPPGTGKTSTSVAIVLEVNLRIRSQILVCAPSNVAV 439
Query: 254 DNIVERLVPHRVRLVRL-GHPARLLPQVLES-ALDAQVLRGDNSSLASDIRKEMKALNGK 311
D + ER+ ++ VRL H L+P ++ LD+QV SS S R+ + L K
Sbjct: 440 DQLAERISAAGLKTVRLHAHYRELVPSSVKHLGLDSQVEEFIASS--SGNRRLRQLLELK 497
Query: 312 LLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDV----IKNADVVLTTLTGAVSRKLDN 367
L L ++E+K +V D+ + ADV+ T GA R+L
Sbjct: 498 LAG--------------EVLDEQEQKIYNDSVRDIEEALLGGADVICCTCIGAADRRLGK 543
Query: 368 TSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFER 426
F V+IDEA Q E + L++G++ L GDH QL P V S+ AE+ GL R+LFER
Sbjct: 544 MRFQYVLIDEATQGTEPETLVPLVRGAKQVFLVGDHCQLRPLVFSLPAERAGLRRSLFER 603
Query: 427 LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS-----TEPTLLL 481
L L L VQYRMH + + S Q Y ++ + +R +S +PT +
Sbjct: 604 L--LMTGHRAVRLDVQYRMHPALSLFPSDQFYEGTLQNGLTEEQRDASRVFPWPDPTRPI 661
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG-VHASDIGIITPYAAQV--VLL 538
EE S +N EA + +LI+ G V DIG+ITPY Q V+
Sbjct: 662 FFYNTTGSEELSANGSSYLNRAEAALTERIITKLIRDGKVKPDDIGVITPYGGQCRYVMN 721
Query: 539 KILRS---KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
++R + +EVS+VD FQGREKE II+S VRSN ++ +GF+ D RR+NV++TR
Sbjct: 722 YLVRCGPLPRTAYERVEVSSVDAFQGREKEFIILSCVRSNHRQGIGFVVDWRRLNVSITR 781
Query: 596 ARR 598
A+R
Sbjct: 782 AKR 784
>gi|405123238|gb|AFR98003.1| ATP dependent helicase [Cryptococcus neoformans var. grubii H99]
Length = 1092
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 153/476 (32%), Positives = 243/476 (51%), Gaps = 45/476 (9%)
Query: 178 EQKPTVLKKDIAFK---PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIIL 234
E +P VL+ + + P L+HSQ A+ KA+ K + ++ GPPGTGKT T I+
Sbjct: 431 EVEPQVLRTQMPKRFAAPNLPELNHSQMSAV-KAVLQKPLSLIQGPPGTGKTVTSASIVY 489
Query: 235 QEVKRG-SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGD 293
K ++L CA SN+AVD++ E++ +++VRL +R + L+S++D L
Sbjct: 490 HLAKMNPGQVLVCAPSNVAVDHLCEKIHQTGLKVVRLAAKSR---EALDSSVDFLSLHSQ 546
Query: 294 NSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNA 350
++ +D E++ KL++ ++ Q EL +ERK + L D++ A
Sbjct: 547 VAN--ADTHHELQ----KLIQLRND------QGELS--QSDERKYKTLVKACEKDILNAA 592
Query: 351 DVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTV 409
DV+ TT GA +L F V+IDEA Q+ E C I L+ G + +L GDH QL P +
Sbjct: 593 DVICTTCVGAGDPRLAKFKFRTVLIDEATQSAEPECMIPLVMGCKQAVLVGDHQQLGPVI 652
Query: 410 QSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGV 469
+ +A + GL ++LFERL L + L VQYRMH + +SS Y ++ +
Sbjct: 653 MNKKAARAGLSQSLFERLVILGNHPIR--LQVQYRMHPCLSEFSSNLFYEGTLQNGVTAP 710
Query: 470 KR---------TSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGV 520
+R + P ++ EE S +N EA + +SGV
Sbjct: 711 ERLRKNVDFPWPVADTPMFFHQNLG---TEEISSSGTSFLNRTEASNVEKMVTKFFKSGV 767
Query: 521 HASDIGIITPYAAQVVLLKILRS-----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSN 575
+ IG+ITPY Q + K D K +EV++VD FQGREK+ II+S VRSN
Sbjct: 768 LPNQIGVITPYEGQRSYIASYMQLHGSLKKDLYKEVEVASVDAFQGREKDYIILSCVRSN 827
Query: 576 SKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+ +GFL+D RR+NVA+TRA+ ++ + + +S L+ +++E ++ G
Sbjct: 828 EHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWLYLLSHYKEKGCFVEG 883
>gi|389738890|gb|EIM80085.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 806
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 163/501 (32%), Positives = 251/501 (50%), Gaps = 86/501 (17%)
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVE---IILQEVKRGSKILACAA 248
P L+ +Q A++ + + ++ GPPGTGKT T++E ++ + I+ C
Sbjct: 242 PVLEGLNKTQLRAVALMIGER-ASLIQGPPGTGKTKTIIETVKLLKVHFQVPHPIMVCTY 300
Query: 249 SNIAVDNIVERLVPHRVRLVRLGHPAR----LLPQVLESALDAQVLRGDNSSLASD---I 301
+N+AVDN+VE L V+ +R+G+ + L P LES L+ LR + L + +
Sbjct: 301 TNVAVDNLVEGLAASGVKPLRVGYGGKVKKSLYPHTLESKLENHALRPEFERLTQEGEHL 360
Query: 302 RKEMKALNGKLLKTKDK------------NTRREIQK---ELRTLSKEER--------KR 338
RK AL K+ + K RR +++ E TL ++E R
Sbjct: 361 RKRSGALQKKIRELSKKADSGDEGGAAVTRARRMLERAEMEGITLERQENILRSKLYAVR 420
Query: 339 QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCI- 397
Q++ + D++ ADVV TT + S L F +V +DEA+ + E A I ++KGSR +
Sbjct: 421 QEM-LHDIVAQADVVCTTCITSASAALRIIDFPVVFLDEASMSTEPASLIPIMKGSRHLA 479
Query: 398 LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQL 457
L GDH QLPP + S EA+ KGLG +LFERL + GD + ML +QYRMH I + S++
Sbjct: 480 LIGDHKQLPPVITSREAQVKGLGISLFERLTE-EGDVPSIMLDLQYRMHPSISRFPSEEF 538
Query: 458 YNSKI---KAHPSGVKRTS---------------STEPTLLLIDIAGCDMEEKKDEEDST 499
YN + SG R+S P+++ +D +G E +D S
Sbjct: 539 YNFSLLDGTVDASGNVRSSLLPPTSSHLVLDPNTGKRPSVVFVDHSG--QESSRDR--SK 594
Query: 500 MNEGEAEVAMAHAKRLIQSG--VHASDIGIITPYAAQVVLL-KILRSKDD---------- 546
+N EA + + + L+ S + +IGII PY AQ+ LL + L +
Sbjct: 595 VNWEEAGIVVKIVEDLLLSNPDLKGENIGIIAPYVAQISLLTRFLHTSTSSPSPSTSSPW 654
Query: 547 --------------KLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVA 592
+L ++E+ TVDGF+GREK+ II S VR+N ++GFL+DRRR+NV
Sbjct: 655 STHLLSTLGSHRCMQLPSIEIKTVDGFEGREKDIIIFSTVRNNDLGQIGFLADRRRLNVG 714
Query: 593 VTRARRQCCLVCDTETVSSDG 613
+TRA+R +V T+ G
Sbjct: 715 LTRAKRGLFVVGSLRTLRESG 735
>gi|116197821|ref|XP_001224722.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88178345|gb|EAQ85813.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1071
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 154/449 (34%), Positives = 238/449 (53%), Gaps = 46/449 (10%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+HSQ AI LS+ + ++ GPPGTGKT T II K S++L CA SN+AVD
Sbjct: 433 LNHSQITAIKTVLSNP-LSLIQGPPGTGKTVTSATIIYHLAKINNSQVLVCAPSNVAVDQ 491
Query: 256 IVERLVPHRVRLVRLGHPAR--LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
+ ER+ +++VRL +R + V AL QV D+++ + + + +KA G+L
Sbjct: 492 LCERIHRTGLKVVRLTAKSREDVESSVSFLALHEQVRMNDSNTELTKLAR-LKADQGELS 550
Query: 314 KTKDKNTRREIQKELRTLSKEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
S++E+K +QL A +++ NADVV T GA +L F
Sbjct: 551 ------------------SQDEKKFKQLTRAAEREILNNADVVCCTCVGAGDPRLSKMKF 592
Query: 371 DLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL
Sbjct: 593 RNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVK 652
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK-----RTSSTEPTLL---- 480
L + L VQYRMH + + S Y+ ++ +GV RT P +
Sbjct: 653 LNFTPIR--LNVQYRMHPCLSKFPSNMFYDGSLQ---NGVTVSERLRTDVDFPWPVADTP 707
Query: 481 LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLK 539
++ + EE S +N EA R +++GV A DIG+ITPY Q ++
Sbjct: 708 MMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFLKAGVKALDIGVITPYEGQRSYIVS 767
Query: 540 ILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
+++ K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+NVA+TR
Sbjct: 768 TMQNTGTFKKETYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTR 827
Query: 596 ARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
A+ ++ + + +S L+ +F++
Sbjct: 828 AKYGLVIIGNPKVLSKHELWHHLLVHFKD 856
>gi|134109641|ref|XP_776499.1| hypothetical protein CNBC4250 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259177|gb|EAL21852.1| hypothetical protein CNBC4250 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1089
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 154/476 (32%), Positives = 246/476 (51%), Gaps = 45/476 (9%)
Query: 178 EQKPTVLKKDIAFK---PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIIL 234
E +P VL+ + + P L+HSQ A+ KA+ K + ++ GPPGTGKT T I+
Sbjct: 431 EVEPQVLRTQMPKRFAAPNLPELNHSQMSAV-KAVLQKPLSLIQGPPGTGKTVTSASIVY 489
Query: 235 QEVKRG-SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGD 293
K ++L CA SN+AVD++ E++ +++VRL +R + L+S++D L
Sbjct: 490 HLAKMNPGQVLVCAPSNVAVDHLCEKIHQTGLKVVRLAAKSR---EALDSSVDFLSLHSQ 546
Query: 294 NSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNA 350
++ +D E++ KL++ ++ Q EL +ERK + L D++ A
Sbjct: 547 VAN--ADTHHELQ----KLIQLRND------QGELS--QSDERKYKALVKACEKDILNAA 592
Query: 351 DVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTV 409
DV+ TT GA +L F V+IDEA Q+ E C I L+ G + +L GDH QL P +
Sbjct: 593 DVICTTCVGAGDPRLAKFKFRTVLIDEATQSAEPECMIPLVMGCKQAVLVGDHQQLGPVI 652
Query: 410 QSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGV 469
+ +A + GL ++LFERL L + L VQYRMH + +SS Y ++ +
Sbjct: 653 MNKKAARAGLSQSLFERLVILGNHPIR--LQVQYRMHPCLSEFSSNLFYEGTLQNGVTAP 710
Query: 470 KR---------TSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGV 520
+R + P ++ EE S +N EA + +SGV
Sbjct: 711 ERLRKHVDFPWPVADTPMFFHQNLG---TEEISSSGTSFLNRTEASNVEKMVTKFFKSGV 767
Query: 521 HASDIGIITPYAAQ----VVLLKILRS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSN 575
+ IG+ITPY Q +++ S K D K +EV++VD FQGREK+ II+S VRSN
Sbjct: 768 LPNQIGVITPYEGQRSYIASYMQLHGSLKKDLYKEVEVASVDAFQGREKDYIILSCVRSN 827
Query: 576 SKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+ +GFL+D RR+NVA+TRA+ ++ + + +S L+ +++E ++ G
Sbjct: 828 EHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWLYLLSHYKEKGCFVEG 883
>gi|402220492|gb|EJU00563.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 868
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 243/480 (50%), Gaps = 81/480 (16%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVE---IILQEVKRGSKILACAASNIA 252
+L+ +Q A++ LS K + ++ GPPGTGKT T++E ++ + +L +N+A
Sbjct: 350 DLNETQTRAVALMLS-KRLSLVQGPPGTGKTKTIIEAARLLKLHFEVPQPLLVATYTNVA 408
Query: 253 VDNIVERLVPHRVRLVRLG-HPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGK 311
VDN+V L +R +R+G P++ + L+ ++ A ++KE++ L
Sbjct: 409 VDNLVAGLAAAGLRPLRVGGEEYSQQPKLDKHRLEVKIA-------AHPLQKEVEKLEKA 461
Query: 312 LLKTKDKNTRREIQKELRTLSKEER---------------KRQQLAVT-----DVIKNAD 351
+ K D+ RRE + EER K ++ A+ D++ AD
Sbjct: 462 IDKLSDR--RREAIDAAKPSKNEERIERAKNTHKEHLLRLKMKKFAIRNAMIHDIVSKAD 519
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCI-LAGDHLQLPPTVQ 410
VV TT + + L+ F +V +DEA+ + E A I L+KGSR + L GDH QLPP +
Sbjct: 520 VVCTTCLTSANTALNVIDFPVVFLDEASMSTEPASLIPLMKGSRHVALIGDHKQLPPIIT 579
Query: 411 SVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK---AHPS 467
S EA+ GL ++LFERL + GD + ML +QYRMH I + S Q YN ++ +
Sbjct: 580 SAEAQAGGLSKSLFERLTE-EGDTPSIMLDMQYRMHPSISRFPSAQFYNKTLRDGTVDHA 638
Query: 468 GVKRTSSTEP--------------------TLLLIDIAGCDMEEKKDEEDSTMNEGEAEV 507
G R S P +++ +D AG E KKD S +N GEA++
Sbjct: 639 GKVRPSLAPPKSTLLDDESVSELQTEKERLSVVFVDHAGS--EAKKDR--SRINAGEAQM 694
Query: 508 AMAHAKRLI--QSGVHASDIGIITPYAAQVVLLKILRSKDD----------------KLK 549
+ + L+ + DIGII PY AQ+ LL L D ++
Sbjct: 695 VCSIVEELLYCNPSMTGDDIGIIAPYVAQIRLLDRLLKHDQEQAERFKSTLGEHRGLQMS 754
Query: 550 NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
N+EV TVDGF+GREKE II S VR+N + +GFL+D RR+NV +TRARR ++ + T+
Sbjct: 755 NIEVKTVDGFEGREKEVIIFSTVRNNPQGAIGFLADGRRLNVGLTRARRALFVLGNAGTL 814
>gi|357122747|ref|XP_003563076.1| PREDICTED: regulator of nonsense transcripts 1 homolog
[Brachypodium distachyon]
Length = 1267
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 232/448 (51%), Gaps = 40/448 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ A+ K++ K V ++ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 504 LNASQVLAV-KSVLQKPVSLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 562
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + + S ++ L L + + EM KL +
Sbjct: 563 LAEKISSTGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSEMH----KLQQL 615
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KD+ Q EL S +E+K + L +++++ADV+ T GA +L N F
Sbjct: 616 KDE------QGELS--SSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNFRFRQ 667
Query: 373 VIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDE+ QA E C I L+ G + +L GDH QL P + +A + GL ++LFERL L
Sbjct: 668 VLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL- 726
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---------TEPTLLLI 482
L VQYRMH + + S Y ++ + +R S+ P +
Sbjct: 727 -GVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERQSTGIDFPWPVPNRPMFFYV 785
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+ +EE S +N EA ++SGV S IG+ITPY Q +
Sbjct: 786 QMG---VEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYM 842
Query: 543 SKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
S++ L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 843 SRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 902
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEH 625
++ + + +S L+ +++EH
Sbjct: 903 YGIVVLGNPKVLSKQPLWNSLLTHYKEH 930
>gi|121701377|ref|XP_001268953.1| regulator of nonsense transcripts, putative [Aspergillus clavatus
NRRL 1]
gi|119397096|gb|EAW07527.1| regulator of nonsense transcripts, putative [Aspergillus clavatus
NRRL 1]
Length = 1079
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 152/455 (33%), Positives = 237/455 (52%), Gaps = 44/455 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ K++ + + ++ GPPGTGKT T II K G ++L CA SN+AVD
Sbjct: 426 LNGSQINAV-KSVLQRPMSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQ 484
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ ER+ ++ VR+ +R + +ES + SL +R + N +L+K
Sbjct: 485 LCERIHRTGLKTVRVTAKSR---EDVESPVGFL-------SLHEQVR--LNDSNIELIKL 532
Query: 316 KDKNTRREIQKELRTLSKEERKR-QQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+++ EL LS ++ KR +QL A +++ NADV+ T GA +L F
Sbjct: 533 N------QLKAELGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLSKLKFR 586
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL L
Sbjct: 587 TVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 646
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST---------EPTLLL 481
+ L VQYRMH + + S Y ++ S + R P +
Sbjct: 647 GCSPIR--LNVQYRMHPCLSQFPSNMFYEGSLQNGVSAIDRLRRDVDFPWPVVDSPMMFW 704
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKI 540
++ EE S +N EA R ++GVH DIGIITPY Q ++
Sbjct: 705 SNLGN---EEISASGTSYLNRTEATNVEKIVTRFFKAGVHPQDIGIITPYEGQRSYIVSS 761
Query: 541 LRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
+++ K + K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRA
Sbjct: 762 MQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 821
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+ ++ + + +S L+++F+E + G
Sbjct: 822 KYGLVILGNPKVLSKHPLWNCLLQHFKEQHCLVEG 856
>gi|407838371|gb|EKG00049.1| regulator of nonsense transcripts 1, putative,nonsense mRNA
reducing factor 1, putative [Trypanosoma cruzi]
Length = 839
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 156/423 (36%), Positives = 225/423 (53%), Gaps = 38/423 (8%)
Query: 195 SNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSKILACAASNIAV 253
SNL+ SQ A+ AL + + ++ GPPGTGKT+T V I+L+ +R S+IL CA SN+AV
Sbjct: 381 SNLNSSQDTAVRTALRNP-LTLIQGPPGTGKTSTSVAIVLEVNRRIRSQILVCAPSNVAV 439
Query: 254 DNIVERLVPHRVRLVRL-GHPARLLPQVLES-ALDAQVLRGDNSSLASDIRKEMKALNGK 311
D + ER+ ++ VRL H ++P ++ LD+QV SS S R+ + L K
Sbjct: 440 DQLAERISAAGLKTVRLHAHYREVVPSSVKHLGLDSQVEEFIASS--SGNRRLRQLLELK 497
Query: 312 LLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDV----IKNADVVLTTLTGAVSRKLDN 367
L L ++E+K +V D+ + ADV+ T GA R+L
Sbjct: 498 LAG--------------EVLDEQEQKIYNDSVRDIEEALLGGADVICCTCIGAADRRLGK 543
Query: 368 TSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFER 426
F V+IDEA Q E + L++G++ L GDH QL P V S+ AE+ GL R+LFER
Sbjct: 544 MRFQYVLIDEATQGTEPETLVPLVRGAKQVFLVGDHCQLRPLVFSLPAERAGLRRSLFER 603
Query: 427 LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS-----TEPTLLL 481
L L L VQYRMH + + S Q Y ++ + +R +S +PT +
Sbjct: 604 L--LMTGHRAVRLDVQYRMHPALSLFPSDQFYEGTLQNGLTEEQRDASRVFPWPDPTRPI 661
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG-VHASDIGIITPYAAQV--VLL 538
EE S +N EA + +LI+ G V DIG+ITPY Q V+
Sbjct: 662 FFYNTTGSEELSANGSSYLNRAEAALTERIITKLIRDGKVKPDDIGVITPYGGQCRYVMN 721
Query: 539 KILRS---KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
++R + +EVS+VD FQGREKE II+S VRSN ++ +GF+ D RR+NV++TR
Sbjct: 722 YLVRCGPLPRTAYERVEVSSVDAFQGREKEFIILSCVRSNHRQGIGFVVDWRRLNVSITR 781
Query: 596 ARR 598
A+R
Sbjct: 782 AKR 784
>gi|254585189|ref|XP_002498162.1| ZYRO0G03740p [Zygosaccharomyces rouxii]
gi|238941056|emb|CAR29229.1| ZYRO0G03740p [Zygosaccharomyces rouxii]
Length = 944
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 171/525 (32%), Positives = 264/525 (50%), Gaps = 47/525 (8%)
Query: 130 PEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIA 189
P L + E + +Y RM+DAL + + + + L + G Q DIA
Sbjct: 336 PPTHLGTGFTAEFIWKGTSYDRMQDALKKFALD-KKSISGFLYYKILGHQV-----VDIA 389
Query: 190 FK---------PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-R 239
F PF + L+ SQ A+ AL + + ++ GPPGTGKT T I+ K
Sbjct: 390 FDVPLPKEFSIPFFAPLNASQSHAVEHALQ-RPLSLIQGPPGTGKTVTSATIVYHLSKLH 448
Query: 240 GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLAS 299
+IL CA SN+AVD++ +L +++VRL +R + +ES++ L S A
Sbjct: 449 KDRILVCAPSNVAVDHLAAKLRMLGLKVVRLTARSR---EDVESSVSDLALHNLVSRSAK 505
Query: 300 DIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
K++ L ++ + K+T++ + K ++A +D++K ADVV T G
Sbjct: 506 GELKKLLKLKEEVGELSVKDTKKFV------------KMVKIAESDILKKADVVCCTCVG 553
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGS-RCILAGDHLQLPPTVQSVEAEKKG 418
A R+L F V+IDE+ QA E C I ++KG+ + IL GDH QL P + +A G
Sbjct: 554 AGDRRL-GAKFKTVLIDESTQASEPECLIPIVKGAIQVILVGDHQQLGPVILERKAGDAG 612
Query: 419 LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT--SSTE 476
L ++LFERL L V L VQYRM+ H+ + S Y ++ + +RT +ST
Sbjct: 613 LKQSLFERLISL--GHVPLRLEVQYRMNPHLSEFPSNMFYEGSLQNGVTIEQRTVPNSTF 670
Query: 477 PTLL----LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYA 532
P + ++ A EE S +N EA RL + GV IG+ITPY
Sbjct: 671 PWPIHEVPMMFWANYGREEISANGTSYLNRIEAMNCERIITRLFKDGVKPEQIGVITPYE 730
Query: 533 AQ-VVLLKILRSKD----DKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
Q +L+ ++ D N+EV++VD FQGREK+ II+S VR+N ++ +GFLSD R
Sbjct: 731 GQRAYILQYMQMNGSLDTDLYVNVEVASVDAFQGREKDYIILSCVRANDQQSIGFLSDSR 790
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
RMNV +TRA+ ++ + +S++ L+ +F E + GS
Sbjct: 791 RMNVGLTRAKYGLVILGNPRALSTNVLWNNLLIHFREKGCLVEGS 835
>gi|310800151|gb|EFQ35044.1| RNA helicase [Glomerella graminicola M1.001]
Length = 1086
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 154/450 (34%), Positives = 241/450 (53%), Gaps = 38/450 (8%)
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASN 250
P +L+ SQ AI KA+ S + ++ GPPGTGKT T II K ++L CA SN
Sbjct: 444 PGLPDLNTSQIAAI-KAVLSTPLSLIQGPPGTGKTVTSATIIYHLCKMNNGQVLVCAPSN 502
Query: 251 IAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG 310
+AVD + ER+ +++VRL +R + +ES++ S LA + M NG
Sbjct: 503 VAVDQLCERIHRTGLKVVRLTAKSR---EDVESSV---------SFLALHEQVRMNDSNG 550
Query: 311 KLLKTKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLD 366
+L+K +++ EL LS ++E+K +QL A D++ NADVV T GA +L
Sbjct: 551 ELVKLA------QLKSELGELSSQDEKKFKQLTKAAERDILHNADVVCCTCVGAGDPRLS 604
Query: 367 NTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFE 425
F V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFE
Sbjct: 605 KMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFE 664
Query: 426 RLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS-STEPTLLLIDI 484
RL +L V L +QYRMH + + S Y+ ++ + +R + ++D+
Sbjct: 665 RLVNLR--LVPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTVRERVRRDVDFPWPVVDM 722
Query: 485 AGCDMEEKKDEE-----DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLL 538
+EE S +N EA R ++GV DIG+ITPY Q ++
Sbjct: 723 PMMFWSNLGNEEISASGTSYLNRTEASNVEKVVTRFFKAGVKPLDIGVITPYEGQRSYIV 782
Query: 539 KILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
+++ K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+NVA+T
Sbjct: 783 STMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALT 842
Query: 595 RARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
RA+ ++ + + +S L+ +F++
Sbjct: 843 RAKYGLVIIGNPKVLSKHELWHHLLVHFKD 872
>gi|169763354|ref|XP_001727577.1| regulator of nonsense transcripts 1 [Aspergillus oryzae RIB40]
gi|238489245|ref|XP_002375860.1| regulator of nonsense transcripts, putative [Aspergillus flavus
NRRL3357]
gi|83770605|dbj|BAE60738.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698248|gb|EED54588.1| regulator of nonsense transcripts, putative [Aspergillus flavus
NRRL3357]
gi|391869636|gb|EIT78831.1| RNA helicase nonsense mRNA reducing factor [Aspergillus oryzae
3.042]
Length = 1072
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 152/448 (33%), Positives = 236/448 (52%), Gaps = 44/448 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ K++ + + ++ GPPGTGKT T II K G ++L CA SN+AVD
Sbjct: 419 LNGSQINAV-KSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKLNGGQVLVCAPSNVAVDQ 477
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ ER+ ++ VR+ +R + +ES + SL +R + N +LLK
Sbjct: 478 LCERIHRTGLKTVRVTAKSR---EDVESPVGFL-------SLHEQVR--LNDSNIELLKL 525
Query: 316 KDKNTRREIQKELRTLSKEERKR-QQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+++ EL LS ++ KR +QL A +++ NADV+ T GA +L F
Sbjct: 526 N------QLKAELGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFR 579
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL L
Sbjct: 580 TVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 639
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS---------STEPTLLL 481
+ L VQYRMH + + S Y ++ S ++R S P +
Sbjct: 640 GCSPIR--LNVQYRMHPCLSEFPSNMFYEGSLQNGISSIERLRRDVDFPWPISDNPMMFW 697
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKI 540
++ EE S +N EA R ++GV DIGIITPY Q ++
Sbjct: 698 SNLGN---EEISASGTSYLNRTEATNVEKIVTRFFKAGVQPGDIGIITPYEGQRSYIVSS 754
Query: 541 LRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
+++ K + K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRA
Sbjct: 755 MQATGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 814
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+ ++ + + +S L+++F+E
Sbjct: 815 KYGLAILGNPKVLSKHPLWNCLLQHFKE 842
>gi|242045720|ref|XP_002460731.1| hypothetical protein SORBIDRAFT_02g033940 [Sorghum bicolor]
gi|241924108|gb|EER97252.1| hypothetical protein SORBIDRAFT_02g033940 [Sorghum bicolor]
Length = 1269
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 231/448 (51%), Gaps = 40/448 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ A+ K++ K V ++ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 507 LNASQVLAV-KSVLQKPVSLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 565
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + + S ++ L L + + E+ KL +
Sbjct: 566 LAEKISSTGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELH----KLQQL 618
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KD+ Q EL S +E+K + L +++++ADV+ T GA +L N F
Sbjct: 619 KDE------QGELS--SSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNFRFRQ 670
Query: 373 VIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDE+ QA E C I L+ G + +L GDH QL P + +A + GL ++LFERL L
Sbjct: 671 VLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL- 729
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---------TEPTLLLI 482
L VQYRMH + + S Y ++ + +R SS P +
Sbjct: 730 -GVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYV 788
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+ EE S +N EA ++SGV S IG+ITPY Q +
Sbjct: 789 QMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYM 845
Query: 543 SKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
S++ L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 846 SRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 905
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEH 625
++ + + +S L+ +++EH
Sbjct: 906 YGIVILGNPKVLSKQPLWNSLLTHYKEH 933
>gi|255575790|ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
gi|223531797|gb|EEF33616.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
Length = 1280
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/448 (33%), Positives = 232/448 (51%), Gaps = 40/448 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ A+ K++ + + ++ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 496 LNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 554
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + + S ++ L L + + E+ KL +
Sbjct: 555 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELH----KLQQL 607
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KD+ Q EL S +E+K + L ++ ++ADV+ T GA +L N F
Sbjct: 608 KDE------QGELS--SSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 659
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDE+ QA E C I L+ G++ IL GDH QL P + +A + GL ++LFERL L
Sbjct: 660 VLIDESTQATEPECLIPLVLGAKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 719
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---------TEPTLLLI 482
+ L VQYRMH + + S Y ++ + +R SS P +
Sbjct: 720 VKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYV 777
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+ EE S +N EA ++SGV S IG+ITPY Q +
Sbjct: 778 QMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYM 834
Query: 543 SKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
S++ L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 835 SRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 894
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEH 625
++ + + +S L+ +++EH
Sbjct: 895 YGIVILGNPKVLSKQPLWNSLLTHYKEH 922
>gi|402470074|gb|EJW04529.1| hypothetical protein EDEG_01257 [Edhazardia aedis USNM 41457]
Length = 534
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 147/466 (31%), Positives = 231/466 (49%), Gaps = 38/466 (8%)
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSKILACAASN 250
PF L+ SQ+ A+ AL ++ + ++ GPPGTGKT T ++ VK+ K+L + SN
Sbjct: 55 PF---LNSSQQIAVKAALHNQ-LTLIQGPPGTGKTVTCAAVVYNLVKQFKGKVLVVSNSN 110
Query: 251 IAVDNIVERLVPHRVRLVRLGHPARLLP----QVLESALDAQVLRGDNSSLASDIRKEMK 306
A+D++ ++ ++++R+ R + L + A++L + K +
Sbjct: 111 TAIDHLAVKIHHSALKVIRIVSKRRENCSDELEFLSLHMQAKILLKEEKKRG----KTKR 166
Query: 307 ALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLA---------------VTDVIKNAD 351
+ ++D NT + + + ++RK+ + A + ++ NAD
Sbjct: 167 STKNTAELSEDSNTENQYSVKDTFNANKDRKKSKTAHLESNSDDDALKYKMMRKILDNAD 226
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQ 410
V+ T + + L V+IDEA Q E I L G R IL GDH QL P +
Sbjct: 227 VICCTCVTSGQKILKKYDIPYVLIDEAVQCTEPLSIIPLAYGCRKLILVGDHKQLGPIIL 286
Query: 411 SVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK 470
+A K GL TLFERL L + +L +QYRMH + W S Y +K S K
Sbjct: 287 DKKAAKAGLKETLFERLIKL--GNLPFLLNMQYRMHPKLAEWPSNTFYEGSLKNGISESK 344
Query: 471 RTSST---EPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGI 527
R + T PT + +EE S +N+ EA V K L++SG+ IG+
Sbjct: 345 RLNRTVLPFPTFFYVCYG---LEELSASGTSYLNQTEALVTEEIIKSLVKSGISEKQIGV 401
Query: 528 ITPYAAQ-VVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR 586
ITPY Q V +L L KL+N+E+ VD +QGREK+ IIIS+VRSN K+ +GFL+D
Sbjct: 402 ITPYEGQRVFILNRLTKTSLKLENLEIKNVDAYQGREKDYIIISLVRSNQKQGIGFLNDE 461
Query: 587 RRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
RR+NV +TRA+ CC++ + T+ + I ++++ GS
Sbjct: 462 RRLNVTLTRAKYGCCIIGNPNTLYKNKMWANFINFYQDRDMIYKGS 507
>gi|154305574|ref|XP_001553189.1| hypothetical protein BC1G_08556 [Botryotinia fuckeliana B05.10]
gi|347828532|emb|CCD44229.1| similar to regulator of nonsense transcripts 1 [Botryotinia
fuckeliana]
Length = 1100
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/455 (32%), Positives = 238/455 (52%), Gaps = 44/455 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ A+ K++ K + ++ GPPGTGKT T +I K G ++L CA SN+AVD
Sbjct: 452 LNSSQISAV-KSVLQKPLSLIQGPPGTGKTVTSATVIYHLAKVNGGQVLVCAPSNVAVDQ 510
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ ER+ ++++VRL +R + +ES++ SL +R M N +L K
Sbjct: 511 LCERIHRTQLKVVRLTAKSR---EDVESSVGFL-------SLHEQVR--MNDSNHELAKL 558
Query: 316 KDKNTRREIQKELRTLSKEERKR----QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+++ EL LS ++ K+ + A +++ NADV+ T GA +L F
Sbjct: 559 T------QLKSELGELSSQDEKKFKALTRAAEREILSNADVICCTCVGAGDPRLAKMKFR 612
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL L
Sbjct: 613 TVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVHL 672
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR---------TSSTEPTLLL 481
+ + L VQYRMH + + S Y+ ++ + +R + P +
Sbjct: 673 GLNPIR--LNVQYRMHPCLSEFPSNMFYDGSLQNGVTMQQRLRRDVDFPWPVADTPMMFW 730
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ--VVLLK 539
++ EE S +N EA R ++GV DIG+ITPY Q V+
Sbjct: 731 SNLGN---EEISASGTSYLNRTEASNVEKIVTRFFKAGVQPGDIGVITPYEGQRSYVVTS 787
Query: 540 ILRS---KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
+ + K + K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRA
Sbjct: 788 MQNAGSFKKEHYKEVEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 847
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+ +V + + +S L+++F++ + + G
Sbjct: 848 KYGLVIVGNPKVLSKHPLWHYLLQHFKDRSCLVEG 882
>gi|414886784|tpg|DAA62798.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1205
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 229/448 (51%), Gaps = 40/448 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ A+ K++ K V ++ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 507 LNASQVLAV-KSVLQKPVSLIQGPPGTGKTVTSGAIVYHMAKQGQGQVLVCAPSNVAVDQ 565
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + + S ++ L L + + E KL +
Sbjct: 566 LAEKISSTGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSEFH----KLQQL 618
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KD+ Q EL S +E+K + L +++++ADV+ T GA +L N F
Sbjct: 619 KDE------QGELS--SSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNFRFRQ 670
Query: 373 VIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDE+ QA E C I L+ G + +L GDH QL P + +A + GL ++LFERL L
Sbjct: 671 VLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILG 730
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKA-------HPSGV--KRTSSTEPTLLLI 482
L VQYRMH + + S Y ++ H SG+ P +
Sbjct: 731 VKPFR--LQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERHSSGIDFPWPVPNRPMFFYV 788
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+ EE S +N EA ++SGV S IG+ITPY Q +
Sbjct: 789 QMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYM 845
Query: 543 SKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
S++ L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 846 SRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 905
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEH 625
++ + + +S L+ +++EH
Sbjct: 906 YGIVILGNPKVLSKQPLWNSLLTHYKEH 933
>gi|320168749|gb|EFW45648.1| RENT1 [Capsaspora owczarzaki ATCC 30864]
Length = 1120
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 152/455 (33%), Positives = 228/455 (50%), Gaps = 47/455 (10%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNI 256
L+ SQ AI++ L + ++ GPPGTGKT T ++ K G ++L CA SNIAVD +
Sbjct: 503 LNESQMSAITRVLR-EPFSLIQGPPGTGKTVTSATLVYHLSKFG-QVLVCAPSNIAVDQL 560
Query: 257 VERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGD--NSSLASDIRKEMKALNGKLLK 314
ER+ +++VRL +R + +ES++ L NS+ ++ K M+
Sbjct: 561 TERIHRTGLKVVRLAAKSR---EAIESSVSFLALHSQIRNSAAHPELAKLMQL------- 610
Query: 315 TKDKNTRREIQKELRTLSKEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
RE Q L + +ER+ +QL A D +KNADV+ TT GA +L F
Sbjct: 611 -------REEQNGLDDV--DERRFRQLKFAAERDFLKNADVICTTCVGAGDPRLARMRFR 661
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V++DEA QA E I ++ G++ +L GDH QL P V +A K ++LFERL +
Sbjct: 662 AVLVDEATQATEPEAIIPIVMGAKQVVLVGDHCQLGPVVMCKKAAKANFTQSLFERL--V 719
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST------EPTLLLIDI 484
G L +QYRMH + + S Y ++ RT T +P +
Sbjct: 720 MGQNRPIRLEIQYRMHPCLSAFPSDTFYEGSLQNGVLAADRTPKTPAFTWPDPNNPMFFW 779
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL------ 538
+ EE S +N EA +L++SG IG+ITPY Q +
Sbjct: 780 SNLGQEELSASGTSYLNRAEASSVEKLVTQLLKSGTKPDQIGVITPYEGQRAFILQTMTA 839
Query: 539 -KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
+LRS+ + +EV++VD FQGREK+ II+S VRS +GFL+D RR+NVA+TRAR
Sbjct: 840 NGVLRSQ--LYQQIEVASVDAFQGREKDYIILSCVRSAG---IGFLNDPRRLNVALTRAR 894
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
++ + ++ D +I YF H ++ GS
Sbjct: 895 YGLVVIGNAHRLARDPLWNEVITYFRNHKLFMEGS 929
>gi|340914927|gb|EGS18268.1| eliminates the production of nonsense-containing-like protein
[Chaetomium thermophilum var. thermophilum DSM 1495]
Length = 1098
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 195/648 (30%), Positives = 313/648 (48%), Gaps = 90/648 (13%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
+ ++ PL+ +E + + R L AQ + NL+ V GL K L+ F
Sbjct: 283 HYQNIFGPLVKMESDYD----------RKLKEAQSED----NLQ-VRWDMGLNNKHLVSF 327
Query: 77 QSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSS---ITVAFDDIP 130
K GDV K D + LK K DL G G V ++ ++ +T+ P
Sbjct: 328 ILPKIESGDV----KLAVGDEMRLK-YKGDLRPYWEGVGYVIKIPNNQSDEVTLELRKSP 382
Query: 131 EE-----GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVL 184
+ + + + + +Y RM+ A+ + V +G I L G +
Sbjct: 383 NDKSVPTDVTTCFSADYVWKATSYDRMQAAMKTFA--VDEMSVSGYIFHKLLGHEVAVAP 440
Query: 185 KKDIAFKPFN----SNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-R 239
K K F+ L+HSQ AI LS+ + ++ GPPGTGKT T II K
Sbjct: 441 MKTQLPKKFHVPGLPELNHSQITAIKTVLSTP-LSLIQGPPGTGKTVTSATIIYHLCKMN 499
Query: 240 GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLES-----ALDAQVLRGDN 294
S++L CA SN+AVD + ER+ +++VRL +R + +ES AL QV
Sbjct: 500 NSQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSR---EDVESSVKFLALHEQVRMHTG 556
Query: 295 SSLASDIRK--EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADV 352
+ D+RK ++KA G+L ++D +K+L+ L+++ + +++ NADV
Sbjct: 557 NP---DLRKLAQLKAEVGEL-SSQD-------EKKLKQLTRQAER-------EILANADV 598
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS 411
V T GA +L F V+IDE+ Q+ E C I L+ G + +L GDH QL P + +
Sbjct: 599 VCCTCVGAGDPRLAKMKFRNVLIDESTQSAEPECMIPLVLGCKQAVLVGDHKQLGPVIMN 658
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSM-LTVQYRMHEHIMNWSSKQLYNSKIK---AHPS 467
+A K GL ++LFERL L +T + L VQYRMH + + S Y ++ H
Sbjct: 659 KKAAKAGLNQSLFERLVKL---NLTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTHAE 715
Query: 468 GVKR------TSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVH 521
+++ + P + ++ EE S +N EA R ++GV
Sbjct: 716 RIRKDVDFPWPVADMPMMFWSNLGS---EEISASGTSYLNRTEAANVEKVVTRFFKAGVK 772
Query: 522 ASDIGIITPYAAQ-VVLLKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNS 576
SDIG+ITPY Q ++ +++ K + K +EV++VD FQGREK+ I++S VRSN
Sbjct: 773 PSDIGVITPYEGQRSYIVSTMQNTGTFKKEWYKEVEVASVDAFQGREKDYIVLSCVRSND 832
Query: 577 KKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+ +GFLSD RR+NVA+TRA+ ++ + + ++ L+ +F++
Sbjct: 833 NQGIGFLSDPRRLNVALTRAKYGLVIIGNPKVLAKHELWHHLLVHFKD 880
>gi|359474491|ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts 1 homolog [Vitis
vinifera]
gi|297742168|emb|CBI33955.3| unnamed protein product [Vitis vinifera]
Length = 1267
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 149/448 (33%), Positives = 231/448 (51%), Gaps = 40/448 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ A+ K++ K + ++ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 474 LNASQVFAV-KSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 532
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + + S ++ L L + + E+ KL +
Sbjct: 533 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELH----KLQQL 585
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KD+ Q EL S +E+K + L ++ ++ADV+ T GA +L N F
Sbjct: 586 KDE------QGELS--SSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 637
Query: 373 VIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDE+ QA E C I L+ G + +L GDH QL P + +A + GL ++LFERL L
Sbjct: 638 VLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 697
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---------TEPTLLLI 482
+ L VQYRMH + + S Y ++ + +R SS P +
Sbjct: 698 VKPI--RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYV 755
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+ EE S +N EA ++SGV S IG+ITPY Q +
Sbjct: 756 QMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYM 812
Query: 543 SKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
S++ L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 813 SRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 872
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEH 625
++ + + +S L+ +++EH
Sbjct: 873 YGIVILGNPKVLSKQPLWNSLLTHYKEH 900
>gi|414886785|tpg|DAA62799.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1251
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 229/448 (51%), Gaps = 40/448 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ A+ K++ K V ++ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 507 LNASQVLAV-KSVLQKPVSLIQGPPGTGKTVTSGAIVYHMAKQGQGQVLVCAPSNVAVDQ 565
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + + S ++ L L + + E KL +
Sbjct: 566 LAEKISSTGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSEFH----KLQQL 618
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KD+ Q EL S +E+K + L +++++ADV+ T GA +L N F
Sbjct: 619 KDE------QGELS--SSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNFRFRQ 670
Query: 373 VIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDE+ QA E C I L+ G + +L GDH QL P + +A + GL ++LFERL L
Sbjct: 671 VLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL- 729
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKA-------HPSGV--KRTSSTEPTLLLI 482
L VQYRMH + + S Y ++ H SG+ P +
Sbjct: 730 -GVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERHSSGIDFPWPVPNRPMFFYV 788
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+ EE S +N EA ++SGV S IG+ITPY Q +
Sbjct: 789 QMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYM 845
Query: 543 SKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
S++ L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 846 SRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 905
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEH 625
++ + + +S L+ +++EH
Sbjct: 906 YGIVILGNPKVLSKQPLWNSLLTHYKEH 933
>gi|171693713|ref|XP_001911781.1| hypothetical protein [Podospora anserina S mat+]
gi|170946805|emb|CAP73609.1| unnamed protein product [Podospora anserina S mat+]
Length = 1090
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 196/649 (30%), Positives = 310/649 (47%), Gaps = 92/649 (14%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
+ +V PL+ +E + + + L AQ + + V GL K L F
Sbjct: 273 HYQNVFGPLVKMESDYD----------KKLKEAQSEDHLV-----VRWDMGLNNKHLASF 317
Query: 77 QSTK---GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSS---ITV----AF 126
K GDV K D + +K K +L +P G G V ++ ++ +T+ A
Sbjct: 318 ILPKIESGDV----KLAVGDEMRIK-YKGELRAPWEGVGYVIKIPNNQSDEVTLELRKAA 372
Query: 127 DD--IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTV 183
+D +P E ++ + + +Y RM+ A+ + V +G I L G +
Sbjct: 373 NDKSVPTECTHN-FSADYVWKATSYDRMQFAMKTFA--VDELSVSGYIFHKLLGHEVAVA 429
Query: 184 LKKDIAFKPFN----SNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK- 238
K K F+ L+HSQ AI LS+ + ++ GPPGTGKT T II +
Sbjct: 430 PMKTQMPKRFHVPGLPELNHSQITAIKTVLSTP-LSLIQGPPGTGKTVTSATIIYHLARM 488
Query: 239 RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPAR--LLPQVLESALDAQVLRGDNSS 296
S++L CA SN+AVD + ER+ +++VRL +R + V AL QV SS
Sbjct: 489 NNSQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVESSVSFLALHEQVRLYKQSS 548
Query: 297 LASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQL---AVTDVIKNADVV 353
+++ K +KA G+L S++E++ +QL A +++ +ADVV
Sbjct: 549 ELTNLNK-LKAAAGELS------------------SQDEKRFKQLTRQAEREILNSADVV 589
Query: 354 LTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSV 412
T GA +L F V+IDE+ Q+ E C I L+ G + +L GDH QL P + +
Sbjct: 590 CCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNK 649
Query: 413 EAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT 472
+A K GL ++LFERL L + V L VQYRMH + + S Y ++ +GV T
Sbjct: 650 KAAKAGLNQSLFERLVKL--NLVPIRLNVQYRMHPCLSEFPSNMFYEGSLQ---NGVTIT 704
Query: 473 S------------STEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGV 520
+ P + ++ EE S +N EA R ++GV
Sbjct: 705 ERLRKDVDFPWPVAETPMMFWSNLGN---EEISASGTSYLNRTEASNVEKIVTRFFKAGV 761
Query: 521 HASDIGIITPYAAQ-VVLLKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSN 575
SDIG+ITPY Q ++ +++ K + K +EV++VD FQGREK+ I++S VRSN
Sbjct: 762 KPSDIGVITPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSN 821
Query: 576 SKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+ +GFLSD RR+NVA+TRA+ ++ + + +S L+ +F++
Sbjct: 822 DNQGIGFLSDPRRLNVALTRAKYGLVIIGNPKVLSKHELWHHLLVHFKD 870
>gi|321256931|ref|XP_003193410.1| DNA helicase [Cryptococcus gattii WM276]
gi|317459880|gb|ADV21623.1| DNA helicase, putative [Cryptococcus gattii WM276]
Length = 954
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 150/451 (33%), Positives = 235/451 (52%), Gaps = 52/451 (11%)
Query: 216 MLHGPPGTGKTTTVVEIIL---QEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGH 272
++ GPPGTGKT +VE I + IL CA +N+AVDN++ +V H V+ +R G
Sbjct: 479 LVQGPPGTGKTRVIVETIKLLKHHFQIPHPILVCAHTNVAVDNLLAGMVKHGVKAIRTGT 538
Query: 273 ----PARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQK-E 327
PA L LE +++ + S+ ++ K L ++ + N R+ + E
Sbjct: 539 AERVPAELKQYTLEIKMESHPMWISVQSMT----EKAKRLKDEIFRMDFDNPERQQKNLE 594
Query: 328 LRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACW 387
++ + ++ QQ+ +++ +ADVV TT A+S L++ F +V +DEA+ A E
Sbjct: 595 MKKIWRQIWGIQQIINRELLLDADVVCTTCISAISANLNSIDFPIVFLDEASMATEPLTL 654
Query: 388 IALLKGSRCI-LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS-MLTVQYRM 445
+ L+KGS + + GDH QLPP + S +A GL +LFERL ++ +V S ML QYRM
Sbjct: 655 LPLMKGSSHVAIIGDHKQLPPVIVSGDAHAGGLSTSLFERL--IHEKDVPSIMLDTQYRM 712
Query: 446 HEHIMNWSSKQLYNSKIKAHPSGVKR----TSSTEPTLLLIDIAGCDMEEKKDEEDSTM- 500
H + +SSK Y+S +K + +R T+ P + D + ++ ++ + T
Sbjct: 713 HPSLAAFSSKTFYSSLLKNGTAASERPPPETAFLIPEDPIPDPSTGELRLSGEKTNLTFL 772
Query: 501 --------------NEGEAEVAMAHAKRLIQSG--VHASDIGIITPYAAQVVLL------ 538
NEGEAE+ + L+ + S IGII PY Q+ +L
Sbjct: 773 NHSHPESPVLQSMANEGEAEIIVDVITDLLHKNPDLKGSQIGIIAPYLGQIKVLSETLFA 832
Query: 539 --------KIL-RSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRM 589
KIL + ++++++E+ TVDGF+GREKE II S VRSN +GFL D RR+
Sbjct: 833 SGTQDSLKKILGDERTEEVQDVEIKTVDGFEGREKEVIIFSTVRSNPGGYIGFLGDWRRV 892
Query: 590 NVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
NV +TRARR +V + ET+ KR+ E
Sbjct: 893 NVGLTRARRALIMVGNKETLKMAKMGKRVAE 923
>gi|414886782|tpg|DAA62796.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1273
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 229/448 (51%), Gaps = 40/448 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ A+ K++ K V ++ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 507 LNASQVLAV-KSVLQKPVSLIQGPPGTGKTVTSGAIVYHMAKQGQGQVLVCAPSNVAVDQ 565
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + + S ++ L L + + E KL +
Sbjct: 566 LAEKISSTGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSEFH----KLQQL 618
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KD+ Q EL S +E+K + L +++++ADV+ T GA +L N F
Sbjct: 619 KDE------QGELS--SSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNFRFRQ 670
Query: 373 VIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDE+ QA E C I L+ G + +L GDH QL P + +A + GL ++LFERL L
Sbjct: 671 VLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL- 729
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKA-------HPSGV--KRTSSTEPTLLLI 482
L VQYRMH + + S Y ++ H SG+ P +
Sbjct: 730 -GVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERHSSGIDFPWPVPNRPMFFYV 788
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+ EE S +N EA ++SGV S IG+ITPY Q +
Sbjct: 789 QMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYM 845
Query: 543 SKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
S++ L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 846 SRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 905
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEH 625
++ + + +S L+ +++EH
Sbjct: 906 YGIVILGNPKVLSKQPLWNSLLTHYKEH 933
>gi|301092662|ref|XP_002997185.1| nonsense transcript regulator [Phytophthora infestans T30-4]
gi|262111572|gb|EEY69624.1| nonsense transcript regulator [Phytophthora infestans T30-4]
Length = 687
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 234/451 (51%), Gaps = 32/451 (7%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ Q +A+ K + + + ++ GPPGTGKT T I+ K+ ++L A SNIAVD+
Sbjct: 102 LNTFQMEAV-KGVLEQPLSLIQGPPGTGKTVTSASIVFHMSKQNMGQVLVTAPSNIAVDH 160
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ ++ +R+VRL +R + + S+++ L SL S + +++ KL++
Sbjct: 161 LTMKISATGLRVVRLAAKSR---EAVASSVEHLSLHAMIKSLDSPDKADLR----KLMQL 213
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVII 375
KD Q E R S KRQ A ++++ ADV+ TT GA +L N F V+I
Sbjct: 214 KDDIGELSSQDEKRFKS---LKRQ--AEREILQAADVICTTCVGAGDPRLSNFRFRQVLI 268
Query: 376 DEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDE 434
DEA QA E C I +++G++ ++ GDH QL P V + +A K GL +LF+RL
Sbjct: 269 DEATQATEPECLIPIVQGAKHVVMVGDHRQLGPVVMNKKAAKAGLNNSLFDRLVKSDTKH 328
Query: 435 VTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST---------EPTLLLIDIA 485
L VQYRMH + + S + Y ++ + +R S+ +PT I +
Sbjct: 329 RPFRLRVQYRMHPFLSEFPSNEFYEGDLQNGVAASERQLSSVDFPWPNPNKPTFFYICLG 388
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKD 545
EE S +N EA +++GV S IG+ITPY Q + ++
Sbjct: 389 A---EEISSSGTSYLNRTEASNVEKIVTTFLKAGVLPSQIGVITPYEGQRAYVVSYMQRN 445
Query: 546 DKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
L K++EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRA+
Sbjct: 446 GPLRSQLYKDVEVASVDSFQGREKDLIILSCVRSNENQGIGFLSDERRLNVALTRAKYGV 505
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
L+ + ++ +L+ ++ ++ + G
Sbjct: 506 ILLGNPRVLAKQTLWNKLLNHYRDNQLIMEG 536
>gi|414886783|tpg|DAA62797.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1272
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 229/448 (51%), Gaps = 40/448 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ A+ K++ K V ++ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 507 LNASQVLAV-KSVLQKPVSLIQGPPGTGKTVTSGAIVYHMAKQGQGQVLVCAPSNVAVDQ 565
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + + S ++ L L + + E KL +
Sbjct: 566 LAEKISSTGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSEFH----KLQQL 618
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KD+ Q EL S +E+K + L +++++ADV+ T GA +L N F
Sbjct: 619 KDE------QGELS--SSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNFRFRQ 670
Query: 373 VIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDE+ QA E C I L+ G + +L GDH QL P + +A + GL ++LFERL L
Sbjct: 671 VLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL- 729
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKA-------HPSGV--KRTSSTEPTLLLI 482
L VQYRMH + + S Y ++ H SG+ P +
Sbjct: 730 -GVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERHSSGIDFPWPVPNRPMFFYV 788
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+ EE S +N EA ++SGV S IG+ITPY Q +
Sbjct: 789 QMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYM 845
Query: 543 SKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
S++ L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 846 SRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 905
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEH 625
++ + + +S L+ +++EH
Sbjct: 906 YGIVILGNPKVLSKQPLWNSLLTHYKEH 933
>gi|221055089|ref|XP_002258683.1| regulator of nonsense transcripts [Plasmodium knowlesi strain H]
gi|193808753|emb|CAQ39455.1| regulator of nonsense transcripts, putative [Plasmodium knowlesi
strain H]
Length = 1516
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 157/457 (34%), Positives = 239/457 (52%), Gaps = 41/457 (8%)
Query: 158 QLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFML 217
++S+ N A L + G++ P + P + L+HSQ DAI K+L S + ++
Sbjct: 757 EVSEDSLNYYKAALTNQIHGKRTPRIANYSA---PNLAALNHSQIDAIKKSLVSP-LSLI 812
Query: 218 HGPPGTGKTTTVVEII--LQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPAR 275
GPPGTGKT T ++ L + K G K+L A SN+AVD + R+ +++VRL +R
Sbjct: 813 QGPPGTGKTLTCATLVYHLSKTKMG-KVLVTAPSNVAVDQLSVRIHKTGLKVVRLCAKSR 871
Query: 276 LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLS-KE 334
+ + S D L + SDI +E+ KLL E+++E+ LS K+
Sbjct: 872 ---EYVPSIADYLYLHNQMKLIKSDIGEEL----NKLL---------ELKEEVGELSQKD 915
Query: 335 ERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL 391
ER+ ++L A ++ ADV+ TT GA+ ++L F V++DEA Q+ E C + L+
Sbjct: 916 ERRLKKLIFFAEYKILVEADVICTTCVGAMDKRLKRFRFSQVLVDEATQSTEPECLVPLV 975
Query: 392 KGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSM-LTVQYRMHEHI 449
G++ +L GDH QL P + +A GLG++LFERL L +T L VQYRMH +
Sbjct: 976 TGAKQIVLVGDHCQLGPIIVCKKAANAGLGKSLFERLVML---GITPFRLEVQYRMHPAL 1032
Query: 450 MNWSSKQLYNS------KIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEG 503
+ S Y+ +K +K P + +EE S +N
Sbjct: 1033 SEFPSYVFYDGCLQNGITLKEREYPLKDFPWPNPKCPMFFYNSTGLEEMSASGTSYLNRA 1092
Query: 504 EAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN---MEVSTVDGFQ 560
EA + LI G+ S IG+ITPY Q + L K+ ++ +EV++VD FQ
Sbjct: 1093 EASNMEKLVRTLINCGLKPSQIGVITPYEGQRAYITSLFQKNISYQHSTEIEVASVDAFQ 1152
Query: 561 GREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
GREK+ I++S VRSN K +GFL+D RR+NVA+TRA+
Sbjct: 1153 GREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAK 1189
>gi|255937245|ref|XP_002559649.1| Pc13g12330 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584269|emb|CAP92302.1| Pc13g12330 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1079
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 153/453 (33%), Positives = 237/453 (52%), Gaps = 44/453 (9%)
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASN 250
P +L+ SQ +A+ K++ + + ++ GPPGTGKT T II K G ++L CA SN
Sbjct: 419 PGLPDLNGSQINAV-KSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSN 477
Query: 251 IAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG 310
+AVD + ER+ ++ VR+ +R + +ESA+ SL +R M N
Sbjct: 478 VAVDQLCERIHRTGLKTVRVTAKSR---EDVESAVGFL-------SLHEQVR--MNDSNI 525
Query: 311 KLLKTKDKNTRREIQKELRTLSKEERKR-QQL---AVTDVIKNADVVLTTLTGAVSRKLD 366
+L+K +++ EL LS ++ KR +QL A +++ NADV+ T GA +L
Sbjct: 526 ELVKLN------QLKAELGELSSQDEKRLKQLTRSAEREILTNADVICCTCVGAGDPRLS 579
Query: 367 NTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFE 425
F V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFE
Sbjct: 580 KGKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFE 639
Query: 426 RLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST---------E 476
RL L + L VQYRMH + + S Y ++ + R +
Sbjct: 640 RLVILGCSPIR--LNVQYRMHPCLSEFPSNMFYEGSLQNGITIADRVRRDVDFPWPIIDD 697
Query: 477 PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-V 535
P + ++ EE S +N EA R ++GV DIGIITPY Q
Sbjct: 698 PMMFWSNLGN---EEISASGTSYLNRTEATNVEKIVTRFFKAGVQPKDIGIITPYEGQRS 754
Query: 536 VLLKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNV 591
++ +++ K + K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NV
Sbjct: 755 YIVSSMQANGTFKKEHYKEIEVASVDAFQGREKDYIILSCVRSNDHQGIGFLSDPRRLNV 814
Query: 592 AVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
A+TRAR ++ + + +S L+++F+E
Sbjct: 815 ALTRARFGLVILGNPKVLSKHPLWNCLLQHFKE 847
>gi|410924489|ref|XP_003975714.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Takifugu rubripes]
Length = 1111
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 190/642 (29%), Positives = 301/642 (46%), Gaps = 68/642 (10%)
Query: 17 EFVSVMAPLIDLE-------KEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLM 69
++ ++ PL+ LE KE++ +IT L+ KK L D+ LM
Sbjct: 278 QYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN---KKRIAYFTLPKTDSDMRLM 334
Query: 70 --GKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L + KGD+ P K G V+ + N D + L+ S+ A
Sbjct: 335 QGDEICLRY---KGDLAPPWK-GIGHVIKVPDNYGD--------EIAIELRSSA--GAPV 380
Query: 128 DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKK 186
+IP +++ + ++ RM+ AL + V +G I L G + V+ K
Sbjct: 381 EIPHN-----FQVDFVWKSTSFDRMQSALKTFA--VDETSVSGYIYHKLLGHEVEDVVIK 433
Query: 187 DIAFKPFNS----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS- 241
K F + +L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++GS
Sbjct: 434 CQLPKRFTAQGLPDLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGSG 492
Query: 242 KILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDI 301
+L CA SNIAVD + E++ +++VRL +R + ++S + L ++ S
Sbjct: 493 PVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSR---EAIDSPVSFLALHNQTRNMES-- 547
Query: 302 RKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAV 361
M L KL + KD+ E K R ++ A +++ NADV+ T GA
Sbjct: 548 ---MPELQ-KLQQLKDETGELSSSDE-----KRYRALRRTAERELLMNADVICCTCVGAG 598
Query: 362 SRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLG 420
+L F ++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL
Sbjct: 599 DPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLS 658
Query: 421 RTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------ 474
++LFERL L + L VQYRMH + + S Y ++ + R
Sbjct: 659 QSLFERLVVLGIRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQW 716
Query: 475 TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ 534
+P + EE S +N EA RL+++G IGIITPY Q
Sbjct: 717 PQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPYEGQ 776
Query: 535 ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRM 589
V ++ S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+
Sbjct: 777 RSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRL 836
Query: 590 NVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
NVA+TRAR +V + + +S L+ Y++E + G
Sbjct: 837 NVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 878
>gi|224126379|ref|XP_002329539.1| predicted protein [Populus trichocarpa]
gi|222870248|gb|EEF07379.1| predicted protein [Populus trichocarpa]
Length = 1242
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 147/444 (33%), Positives = 227/444 (51%), Gaps = 44/444 (9%)
Query: 206 SKALSSKNVF-----MLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDNIVER 259
S+ L+ KNV ++ GPPGTGKT T I+ K+G ++L CA SN+AVD + E+
Sbjct: 487 SQVLAVKNVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEK 546
Query: 260 LVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKN 319
+ +++VRL +R + + S ++ L L + + E+ KL + KD+
Sbjct: 547 ISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELH----KLQQLKDE- 598
Query: 320 TRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDLVIID 376
Q EL S +E+K + L ++ ++ADV+ T GA +L N F V+ID
Sbjct: 599 -----QGELS--SSDEKKYKALKRATEREISQSADVICCTCGGAGDPRLSNFRFRQVLID 651
Query: 377 EAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEV 435
E+ QA E C I L+ G++ + GDH QL P + +A + GL ++LFERL L +
Sbjct: 652 ESTQATEPECLIPLVLGAKQVVFVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPI 711
Query: 436 TSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---------TEPTLLLIDIAG 486
L VQYRMH + + S Y ++ + +R SS P + +
Sbjct: 712 --RLQVQYRMHPCLSEFPSNNFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMG- 768
Query: 487 CDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDD 546
EE S +N EA ++SGV S IG+ITPY Q + S++
Sbjct: 769 --QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNG 826
Query: 547 KL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 827 ALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIV 886
Query: 602 LVCDTETVSSDGFLKRLIEYFEEH 625
++ + + +S L+ +++EH
Sbjct: 887 ILGNPKVLSKQPLWNSLLTHYKEH 910
>gi|242774708|ref|XP_002478495.1| nonsense transcript regulator, putative [Talaromyces stipitatus
ATCC 10500]
gi|218722114|gb|EED21532.1| nonsense transcript regulator, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1093
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 154/456 (33%), Positives = 234/456 (51%), Gaps = 60/456 (13%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ K++ K + ++ GPPGTGKT T II K G ++L CA SN+AVD
Sbjct: 442 LNGSQINAV-KSVLQKPLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQ 500
Query: 256 IVERLVPHRVRLVRLG--------HPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKA 307
+ ER+ ++ VR+ P R L +L QV D S+I E+
Sbjct: 501 LCERIHRTGLKTVRVTAKSREDVESPVRFL------SLHEQVRMND-----SNI--ELNK 547
Query: 308 LNGKLLKTKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSR 363
LN +++ EL LS ++E+K +QL A +++ NADV+ T GA
Sbjct: 548 LN-------------QLKSELGELSSQDEKKFKQLTRAAEREILTNADVICCTCVGAGDP 594
Query: 364 KLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRT 422
+L F V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++
Sbjct: 595 RLAKFKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQS 654
Query: 423 LFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR---------TS 473
LFERL L + L VQYRMH + + S Y ++ S +R
Sbjct: 655 LFERLVILGCSPIR--LNVQYRMHPCLSEFPSNMFYEGSLQNGVSMAQRLRRDVDFPWPV 712
Query: 474 STEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAA 533
+ P + ++ EE S +N EA R ++GV SDIGIITPY
Sbjct: 713 AENPMMFWSNLGN---EEISASGTSYLNRTEAANVEKIVTRFFKAGVQPSDIGIITPYEG 769
Query: 534 Q-VVLLKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
Q ++ +++ K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR
Sbjct: 770 QRSYVVSSMQATGTFKKEHYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRR 829
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+NVA+TRA+ ++ + + +S L+ +F+E
Sbjct: 830 LNVALTRAKYGVVILGNPKVLSKHPLWNYLLLHFKE 865
>gi|156096655|ref|XP_001614361.1| regulator of nonsense transcripts [Plasmodium vivax Sal-1]
gi|148803235|gb|EDL44634.1| regulator of nonsense transcripts, putative [Plasmodium vivax]
Length = 1539
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 150/418 (35%), Positives = 224/418 (53%), Gaps = 38/418 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII--LQEVKRGSKILACAASNIAVD 254
L+HSQ DAI K+L S + ++ GPPGTGKT T ++ L + K G K+L A SN+AVD
Sbjct: 818 LNHSQIDAIKKSLVSP-LSLIQGPPGTGKTLTCATLVYHLSKTKMG-KVLVTAPSNVAVD 875
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
+ R+ +++VRL +R + + S D L L SDI +E+ KLL
Sbjct: 876 QLSVRIHKTGLKVVRLCAKSR---EYVPSIADYLYLHNQMKLLKSDIGEELN----KLL- 927
Query: 315 TKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
E+++E+ LS K+ER+ ++L A ++ ADV+ TT GA+ ++L F
Sbjct: 928 --------ELKEEVGELSQKDERRLKKLIFFAEYKILLEADVICTTCVGAMDKRLKRFRF 979
Query: 371 DLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
V++DEA Q+ E C + L+ G++ +L GDH QL P + +A GLG++LFERL
Sbjct: 980 SQVLVDEATQSTEPECLVPLVTGAKQIVLVGDHCQLGPIIVCKKAANAGLGKSLFERLVM 1039
Query: 430 LYGDEVTSM-LTVQYRMHEHIMNWSSKQLYNS------KIKAHPSGVKRTSSTEPTLLLI 482
L +T L VQYRMH + + S Y+ +K +K P +
Sbjct: 1040 L---GITPFRLEVQYRMHPALSEFPSYVFYDGCLQNGITLKEREYPLKDFPWPNPKCPMF 1096
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+EE S +N EA + LI G+ + IG+ITPY Q + L
Sbjct: 1097 FYNSTGLEEMSASGTSYLNRAEASNMEKLVRTLISCGLKPTQIGVITPYEGQRAYITSLF 1156
Query: 543 SKDDKLKN---MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
K+ ++ +EV++VD FQGREK+ I++S VRSN K +GFL+D RR+NVA+TRA+
Sbjct: 1157 QKNISYQHSTEIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAK 1214
>gi|403178280|ref|XP_003336719.2| hypothetical protein PGTG_17974 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164088|gb|EFP92300.2| hypothetical protein PGTG_17974 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1131
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 163/528 (30%), Positives = 266/528 (50%), Gaps = 47/528 (8%)
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIP-VLFGEQKPT--V 183
D +P E L ++ + ++ RM+ A+ + V + +G I L G + P V
Sbjct: 407 DGVPHE-LTVNFSVDFVWKSTSFDRMQMAMKTFA--VDDQSVSGYIYRKLLGHETPVPQV 463
Query: 184 LKKDIAFK---PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG 240
L+ + + P L+HSQ A+ K++ K + ++ GPPGTGKT T ++ K
Sbjct: 464 LRTQMPKRVSAPNLPELNHSQVSAV-KSVLQKPLSLVQGPPGTGKTVTSASVVYHLSKMN 522
Query: 241 -SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGD--NSSL 297
++L CA SN+AVD + E++ +++VR+ +R + ++S++ L N+
Sbjct: 523 PGQVLVCAPSNVAVDQLTEKIHLTGLKVVRVQAKSR---EAIDSSVQYLTLHQQVANNDT 579
Query: 298 ASDIRK--EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLT 355
D++K ++KA G+L T ++ K L L + E ++ NADV+L
Sbjct: 580 HPDLQKLIQLKAEQGELSSTDERRY-----KSLTRLCERE----------ILTNADVILC 624
Query: 356 TLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEA 414
T GA +L F V+IDEA QA E C I L G + + GDH QL PT+ + +A
Sbjct: 625 TCVGAGDPRLAKMKFRTVLIDEATQATEPECMIPLTLGVKQVVFVGDHQQLGPTIMNKKA 684
Query: 415 EKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK---AHPSGVKR 471
+ GL +++FERL L G+ L VQYRMH + + S Y ++ P +K+
Sbjct: 685 ARAGLTQSMFERLV-LLGNRPI-RLQVQYRMHPCLSEFPSNMFYEGSLQNGVTAPERIKK 742
Query: 472 T---SSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
+PT + EE S +N EA R ++GV S IGI+
Sbjct: 743 NVDFPWPQPTTPMCFHCNLGQEEISSSGTSFLNRTEASNVEKVVTRFFKAGVLPSQIGIV 802
Query: 529 TPYAAQ-VVLLKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFL 583
TPY Q ++ +++ K D K++EV++VD FQGREK+ II+S VRSN + +GFL
Sbjct: 803 TPYEGQRSYIVTYMQTNGTLKKDLYKDIEVASVDAFQGREKDYIILSCVRSNDHQGIGFL 862
Query: 584 SDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+D RR+NVA+TRA+ ++ + + +S L+ ++E + + G
Sbjct: 863 NDPRRLNVALTRAKYGVVVLGNPKVLSKHALWHFLLTAYKEKSCLVEG 910
>gi|425767683|gb|EKV06249.1| Regulator of nonsense transcript, putative [Penicillium digitatum
PHI26]
gi|425780378|gb|EKV18385.1| Regulator of nonsense transcript, putative [Penicillium digitatum
Pd1]
Length = 1079
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 153/453 (33%), Positives = 237/453 (52%), Gaps = 44/453 (9%)
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASN 250
P +L+ SQ +A+ K++ + + ++ GPPGTGKT T II K G ++L CA SN
Sbjct: 419 PGLPDLNGSQINAV-KSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSN 477
Query: 251 IAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG 310
+AVD + ER+ ++ VR+ +R + +ESA+ SL +R M N
Sbjct: 478 VAVDQLCERIHRTGLKTVRVTAKSR---EDVESAVGFL-------SLHEQVR--MNDSNI 525
Query: 311 KLLKTKDKNTRREIQKELRTLSKEERKR-QQL---AVTDVIKNADVVLTTLTGAVSRKLD 366
+L+K +++ EL LS ++ KR +QL A +++ NADV+ T GA +L
Sbjct: 526 ELVKLN------QLKAELGELSSQDEKRLKQLTRSAEREILTNADVICCTCVGAGDPRLS 579
Query: 367 NTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFE 425
F V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFE
Sbjct: 580 KGKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFE 639
Query: 426 RLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST---------E 476
RL L + L VQYRMH + + S Y ++ + R +
Sbjct: 640 RLVILGCSPIR--LNVQYRMHPCLSEFPSNMFYEGSLQNGITIADRVRRDVDFPWPIIDD 697
Query: 477 PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-V 535
P + ++ EE S +N EA R ++GV DIGIITPY Q
Sbjct: 698 PMMFWSNLGN---EEISASGTSYLNRTEATNVEKIVTRFFKAGVQPRDIGIITPYEGQRS 754
Query: 536 VLLKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNV 591
++ +++ K + K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NV
Sbjct: 755 YIVSSMQATGTFKKEHYKEIEVASVDAFQGREKDYIILSCVRSNDHQGIGFLSDPRRLNV 814
Query: 592 AVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
A+TRAR ++ + + +S L+++F+E
Sbjct: 815 ALTRARFGLVILGNPKVLSKHPLWNCLLQHFKE 847
>gi|115491919|ref|XP_001210587.1| ATP-dependent helicase NAM7 [Aspergillus terreus NIH2624]
gi|114197447|gb|EAU39147.1| ATP-dependent helicase NAM7 [Aspergillus terreus NIH2624]
Length = 1072
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 235/448 (52%), Gaps = 44/448 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ K++ + + ++ GPPGTGKT T II K G ++L CA SN+AVD
Sbjct: 419 LNGSQINAV-KSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQ 477
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ ER+ ++ VR+ +R + +ES + SL +R + N +L+K
Sbjct: 478 LCERIHRTGLKTVRVTAKSR---EDVESPVGFL-------SLHEQVR--LNDSNIELMKL 525
Query: 316 KDKNTRREIQKELRTLSKEERKR-QQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+++ EL LS ++ KR +QL A +++ NADV+ T GA +L F
Sbjct: 526 N------QLKSELGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFR 579
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL L
Sbjct: 580 TVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 639
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST---------EPTLLL 481
+ L VQYRMH + + S Y ++ S ++R P +
Sbjct: 640 GCSPIR--LNVQYRMHPCLSEFPSNMFYEGSLQNGISSIERLRRDVDFPWPIMDNPMMFW 697
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKI 540
++ EE S +N EA R ++GV DIGIITPY Q ++
Sbjct: 698 SNLGN---EEISASGTSYLNRTEATNVEKIVTRFFKAGVQPQDIGIITPYEGQRSYIVSS 754
Query: 541 LRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
+++ K + K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRA
Sbjct: 755 MQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 814
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+ ++ + + +S L+++F+E
Sbjct: 815 KYGLAILGNPKVLSKHPLWNCLLQHFKE 842
>gi|124802033|ref|XP_001347342.1| regulator of nonsense transcripts, putative [Plasmodium falciparum
3D7]
gi|23494920|gb|AAN35255.1|AE014829_55 regulator of nonsense transcripts, putative [Plasmodium falciparum
3D7]
Length = 1554
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 150/439 (34%), Positives = 234/439 (53%), Gaps = 40/439 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+HSQ DAI ++L S + ++ GPPGTGKT T ++ VK K+L A SN+AVD
Sbjct: 787 LNHSQIDAIKRSLLSP-LSLIQGPPGTGKTLTCATLVYHLVKMNMGKVLVTAPSNVAVDQ 845
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ R+ +++VRL +R + + S + L L +DI +E+ KLL
Sbjct: 846 LSVRIHRSGLKVVRLCSKSR---ESVPSIAEYLYLHNQMKLLKTDIAEEL----NKLL-- 896
Query: 316 KDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
E+++E+ LS K+ER+ ++L A +++ ADV+ T GA+ ++L F
Sbjct: 897 -------ELKEEVGELSQKDERRLKKLILFAEHEILIEADVICCTCVGAMDKRLKKFRFR 949
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V++DEA Q+ E C + L+ G++ +L GDH QL P + +A GLG++LFERL L
Sbjct: 950 QVLVDEATQSTEPECLVPLVTGAKQIVLVGDHCQLGPIIVCKKAANAGLGKSLFERLVML 1009
Query: 431 YGDEVTSM-LTVQYRMHEHIMNWSSKQLYNS--------KIKAHPSGVKRTSSTEPTLLL 481
+T L VQYRMH + + S Y+ K + +P + + +
Sbjct: 1010 ---GITPFRLEVQYRMHPALSEFPSYVFYDGSLQNGITLKEREYPLKSFPWPNAKCPMFF 1066
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL 541
+ G +EE S +N EA + L+Q G+ S IG+ITPY Q + L
Sbjct: 1067 YNSTG--LEEMSASGTSYLNRSEASNMEKLVRTLLQCGLKPSQIGVITPYEGQRAYITSL 1124
Query: 542 RSKDDKLKN---MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARR 598
K+ +N +EV++VD FQGREK+ I++S VRSN K +GFL+D RR+NVA+TRA+
Sbjct: 1125 FQKNISFQNSSDIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAKY 1184
Query: 599 QCCLVCDTETVSSDGFLKR 617
+ + + +S F+ R
Sbjct: 1185 GLIICGNAKVLSRHHFISR 1203
>gi|393216574|gb|EJD02064.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 776
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 167/460 (36%), Positives = 236/460 (51%), Gaps = 66/460 (14%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVD-AQTGLMGKTL 73
L F L+ EK+ EI S +L +++G +LNL ++ + G+ G+ L
Sbjct: 7 LDAFFERQIQLLQEEKQVEIDQSSLLLTKCSLKLLEQRGLALLNLVPLNNVRVGMGGRNL 66
Query: 74 LEFQSTKG----DVLPAHKFGTHDVVVLK----------PN-KADLGSPALGQGVVYRLK 118
+E + LP H F D+ ++ P+ ++D +GVVY++
Sbjct: 67 IELGRSAALSTSASLPPHTFRPGDIARIEKSLSKSSKKEPSARSDTSKENSLEGVVYKVT 126
Query: 119 DSSITVAFDDIPE--EGLNSP--LRLEKLANEVTYRRMKDALIQLSKGVQNGPAA----- 169
DS I +A D + E L+ P L KLAN V RM+ ++ L + AA
Sbjct: 127 DSLIVLAVDGDRQANEDLDLPNICSLIKLANNVPNDRMQKVILSLYATFSSEAAAKNTKL 186
Query: 170 GLIP-------VLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPG 222
L P VL G P+ + ++ +L+ SQK A+ AL S+ V +HGPPG
Sbjct: 187 ALHPDTISVANVLLGISAPSKVVPVDGVDFYDVSLNDSQKQAVRFALGSREVACIHGPPG 246
Query: 223 TGKTTTVVEIILQ---------------EVKRGSKILACAASNIAVDNIVERLVPHR--- 264
TGKT T++EII Q VKR IL C ASN++VDNI+ERL+
Sbjct: 247 TGKTHTLLEIIRQFLFPRCAPGPSSSQGPVKR---ILVCGASNLSVDNILERLLLPPLPG 303
Query: 265 ---VRLVRLGHPARLLPQV--LESALDAQVLRGDNSSLASDIRKEM-KAL-------NGK 311
++ R+GHPAR+ Q LE+ LDAQ R + + L +DI+ E+ K+L G+
Sbjct: 304 MTSIKCTRVGHPARVKGQASSLEATLDAQTTRCEQAELINDIKDELSKSLLCVAGKGKGQ 363
Query: 312 LLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
K RR++ E++ L KE RKR++ V+ V+ A VVL T A R L+N FD
Sbjct: 364 KGKKPRGEERRKLWDEIKELRKECRKREKGVVSSVLSEAQVVLATCHSAGGRTLENMFFD 423
Query: 372 LVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQS 411
+VIIDEA QALE ACWI ++KG R ILAGDHLQLPPTV S
Sbjct: 424 VVIIDEATQALEAACWIPIVKGKRLILAGDHLQLPPTVLS 463
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 137/236 (58%), Gaps = 18/236 (7%)
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS--------- 467
K L TLFERL YG + ML +QYRMH I + SK LYNS+++ S
Sbjct: 541 KDLSITLFERLEKTYGKSIKRMLEIQYRMHSKICEFPSKMLYNSQLRPDESVASHLLQDL 600
Query: 468 ---GVKRTSSTEPTLLLIDIAGCDMEEKKDEE---DSTMNEGEAEVAMAHAKRLIQSGVH 521
G + ++ +D +G + E+ E+ S NE EA + +LI +G++
Sbjct: 601 ENAGDDSSELLTAPVVFLDTSGSEYYERTVEDVDDGSKYNENEAMLVKVWLAKLIGAGIY 660
Query: 522 ASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVG 581
S I IITPY AQV + L S D+ +E+ TVDG QGREKEAIIIS+VRSN K+EVG
Sbjct: 661 PSQIAIITPYQAQVSHISALLS-DEYKDELEIGTVDGMQGREKEAIIISLVRSNDKREVG 719
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE-YLSGSEYL 635
FL D+RR+NVA+TRARR C++ D+ TV G FLK + + E +AE Y G E L
Sbjct: 720 FLKDKRRLNVAMTRARRHLCVIGDSSTVQHGGKFLKAWMAWLENNAEVYYGGLEQL 775
>gi|389583252|dbj|GAB65987.1| regulator of nonsense transcripts [Plasmodium cynomolgi strain B]
Length = 1470
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 150/418 (35%), Positives = 224/418 (53%), Gaps = 38/418 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII--LQEVKRGSKILACAASNIAVD 254
L+HSQ DAI K+L S + ++ GPPGTGKT T ++ L + K G K+L A SN+AVD
Sbjct: 702 LNHSQIDAIKKSLVSP-LSLIQGPPGTGKTLTCATLVYHLSKTKMG-KVLVTAPSNVAVD 759
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
+ R+ +++VRL +R + + S D L L SDI +E+ KLL
Sbjct: 760 QLSVRIHKTGLKVVRLCAKSR---EYVPSIADYLYLHNQMKLLKSDIGEELN----KLL- 811
Query: 315 TKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
E+++E+ LS K+ER+ ++L A ++ ADV+ TT GA+ ++L F
Sbjct: 812 --------ELKEEVGELSQKDERRLKKLIFFAEYKILLEADVICTTCVGAMDKRLKRFRF 863
Query: 371 DLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
V++DEA Q+ E C + L+ G++ +L GDH QL P + +A GLG++LFERL
Sbjct: 864 SQVLVDEATQSTEPECLVPLVTGAKQIVLVGDHCQLGPIIVCKKAANAGLGKSLFERLVM 923
Query: 430 LYGDEVTSM-LTVQYRMHEHIMNWSSKQLYNS------KIKAHPSGVKRTSSTEPTLLLI 482
L +T L VQYRMH + + S Y+ +K +K P +
Sbjct: 924 L---GITPFRLEVQYRMHPALSEFPSYVFYDGCLQNGITLKEREYPLKDFPWPNPKCPMF 980
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+EE S +N EA + LI G+ + IG+ITPY Q + L
Sbjct: 981 FYNSTGLEEMSASGTSYLNRAEASNMEKLVRTLINCGLKPTQIGVITPYEGQRAYITSLF 1040
Query: 543 SKDDKLKN---MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
K+ ++ +EV++VD FQGREK+ I++S VRSN K +GFL+D RR+NVA+TRA+
Sbjct: 1041 QKNISYQHSTEIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAK 1098
>gi|389640681|ref|XP_003717973.1| regulator-nonsense transcripts 1 [Magnaporthe oryzae 70-15]
gi|351640526|gb|EHA48389.1| regulator-nonsense transcripts 1 [Magnaporthe oryzae 70-15]
gi|440471031|gb|ELQ40068.1| ATP-dependent helicase NAM7 [Magnaporthe oryzae Y34]
gi|440490268|gb|ELQ69843.1| ATP-dependent helicase NAM7 [Magnaporthe oryzae P131]
Length = 1105
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 153/450 (34%), Positives = 239/450 (53%), Gaps = 46/450 (10%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVD 254
+L+ SQ AI KA+ S + ++ GPPGTGKT T II K GS++L CA SN+AVD
Sbjct: 451 DLNGSQISAI-KAVLSTPLSLIQGPPGTGKTVTSATIIYHLAKMNGSQVLVCAPSNVAVD 509
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
+ ER+ +++VRL +R + +ES++ S LA + M N +L K
Sbjct: 510 QLCERVHRTGLKVVRLTAKSR---EDVESSV---------SFLALHEQVRMNDTNPELAK 557
Query: 315 TKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
+ +++ EL LS ++E+K +QL A +++ NADVV T GA +L F
Sbjct: 558 LQ------QLKSELGELSSQDEKKFKQLTKAAEREILSNADVVCCTCVGAGDPRLAKLKF 611
Query: 371 DLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL
Sbjct: 612 RNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVK 671
Query: 430 LYGDEVTSM-LTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR---------TSSTEPTL 479
L +T + L VQYRMH + + S Y ++ + +R + P +
Sbjct: 672 L---GLTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTIQQRLRRDVDFPWPVADMPMM 728
Query: 480 LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLL 538
++ EE S +N EA R ++GV DIG++TPY Q ++
Sbjct: 729 FWSNLGN---EEISASGTSYLNRTEASNVEKLVTRFFKAGVKPGDIGVVTPYEGQRSYIV 785
Query: 539 KILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
+++ K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+NVA+T
Sbjct: 786 STMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNESQGIGFLSDPRRLNVALT 845
Query: 595 RARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
RA+ ++ + + +S L+ +F +
Sbjct: 846 RAKYGVVIIGNPKVLSKHELWHHLLIHFRD 875
>gi|356541331|ref|XP_003539131.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine
max]
Length = 1270
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 147/448 (32%), Positives = 232/448 (51%), Gaps = 40/448 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ A+ K++ + + ++ GPPGTGKT T ++ K+G ++L CA SN+AVD
Sbjct: 486 LNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAALVYHMAKQGQGQVLVCAPSNVAVDQ 544
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + + S ++ L L + + E+ KL +
Sbjct: 545 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSDKSELH----KLQQL 597
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KD+ Q EL S +E+K + L ++ ++ADV+ T GA +L N F
Sbjct: 598 KDE------QGELS--SSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 649
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDE+ QA E C I L+ G++ +L GDH QL P + +A + GL ++LFERL L
Sbjct: 650 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 709
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---------TEPTLLLI 482
+ L VQYRMH + + S Y ++ + +R SS P +
Sbjct: 710 VKPIR--LQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYV 767
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+ EE S +N EA ++SGV S IG+ITPY Q +
Sbjct: 768 QMG---QEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYM 824
Query: 543 SKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
S++ L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 825 SRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 884
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEH 625
++ + + +S L+ +++EH
Sbjct: 885 YGIVILGNPKVLSKQPLWNSLLTHYKEH 912
>gi|356497066|ref|XP_003517385.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine
max]
Length = 1266
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 147/448 (32%), Positives = 232/448 (51%), Gaps = 40/448 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ A+ K++ + + ++ GPPGTGKT T ++ K+G ++L CA SN+AVD
Sbjct: 483 LNASQVFAV-KSVLQRPISLIQGPPGTGKTVTSAALVYHMAKQGQGQVLVCAPSNVAVDQ 541
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + + S ++ L L + + E+ KL +
Sbjct: 542 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSDKSELH----KLQQL 594
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KD+ Q EL S +E+K + L ++ ++ADV+ T GA +L N F
Sbjct: 595 KDE------QGELS--SSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 646
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDE+ QA E C I L+ G++ +L GDH QL P + +A + GL ++LFERL L
Sbjct: 647 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 706
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---------TEPTLLLI 482
+ L VQYRMH + + S Y ++ + +R SS P +
Sbjct: 707 VKPIR--LQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERKSSGIDFPWPVPNRPMFFYV 764
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+ EE S +N EA ++SGV S IG+ITPY Q +
Sbjct: 765 QMG---QEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYM 821
Query: 543 SKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
S++ L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 822 SRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 881
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEH 625
++ + + +S L+ +++EH
Sbjct: 882 YGIVILGNPKVLSKQPLWNSLLTHYKEH 909
>gi|168016276|ref|XP_001760675.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688035|gb|EDQ74414.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1610
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 144/452 (31%), Positives = 232/452 (51%), Gaps = 34/452 (7%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ A+ K++ K V ++ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 746 LNASQVYAV-KSVLQKPVSLIQGPPGTGKTVTSAAIVYHLAKQGQGQVLVCAPSNVAVDQ 804
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + + S ++ L L + + E+ L +LLK
Sbjct: 805 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTTDKSELHKL--QLLKD 859
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVII 375
+ +K+ ++L + + ++ ++ADV+ T GA +L N F V++
Sbjct: 860 ELGELSSSDEKKYKSLKRATER-------EISQSADVICCTCVGAGDPRLANFRFRQVLV 912
Query: 376 DEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDE 434
DE+ QA E C I L+ G++ +L GDH QL P + +A + GL ++LFERL L
Sbjct: 913 DESTQATEPECLIPLVLGAKQLVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKP 972
Query: 435 VTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R S P + +
Sbjct: 973 I--RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTTSDRLLSQIDFPWPVPNRPMFFYVQMG 1030
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKD 545
EE S +N GEA ++SGV + IG+ITPY Q + +++
Sbjct: 1031 ---QEEISASGTSYLNRGEAGNVEKIVTTFLKSGVVPAQIGVITPYEGQRAYIVNNMARN 1087
Query: 546 DKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 1088 GSLRQQLYKEIEVASVDSFQGREKDFIIVSCVRSNEHQGIGFLNDPRRLNVALTRARFGI 1147
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
++ + + +S L+ +++EH + GS
Sbjct: 1148 VILGNPKVLSKQPLWNTLLTHYKEHEVLVEGS 1179
>gi|149061857|gb|EDM12280.1| immunoglobulin mu binding protein 2, isoform CRA_b [Rattus
norvegicus]
Length = 567
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 146/225 (64%), Gaps = 13/225 (5%)
Query: 424 FERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKRTS 473
ERLA+ +G V ML VQYRMH+ I W+S+ +Y+ ++ AHPS GV T
Sbjct: 1 MERLAEKHGAAVVRMLAVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGVADTE 60
Query: 474 STEPTLLLIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYA 532
T LLLID AGC + E ++E+ S N GE + H + L+ +GV A DI +I PY
Sbjct: 61 ETSVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVIAPYN 120
Query: 533 AQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVA 592
QV LL+ +S +K +E+ +VDGFQGREKEA+I++ VRSN K EVGFL++ RR+NVA
Sbjct: 121 LQVDLLR--QSLSNKHPELEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVA 178
Query: 593 VTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
VTRARR ++CD+ TV++ FLK L++YF EH E + EYL++
Sbjct: 179 VTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEVRTAFEYLDD 223
>gi|320592037|gb|EFX04476.1| regulator of nonsense [Grosmannia clavigera kw1407]
Length = 1095
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 238/454 (52%), Gaps = 42/454 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ AI KA+ S + ++ GPPGTGKT T II K S++L CA SN+AVD
Sbjct: 454 LNGSQISAI-KAVLSTPLSLIQGPPGTGKTVTSATIIYHLAKMNNSQVLVCAPSNVAVDQ 512
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ ER+ +++VRL +R + +ES++ S LA + M N +L T
Sbjct: 513 LCERVHRTGLKVVRLTAKSR---EDVESSV---------SFLALHEQVRMNDTNVEL--T 558
Query: 316 KDKNTRREIQKELRTLSKEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ + + E+ EL +L +E+K +QL A +++ NADVV T GA +L F
Sbjct: 559 RLQLLKNEV-GELSSL--DEKKFKQLTKAAEKEILNNADVVCCTCVGAGDPRLAKMKFRN 615
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL L
Sbjct: 616 VLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKLG 675
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGV-------KRTSSTEPTL--LLI 482
+ L VQYRMH H+ + S Y ++ +GV K P + ++
Sbjct: 676 FAPIR--LNVQYRMHPHLAAFPSNMFYEGSLQ---NGVTIQERLRKDVDFPWPVVDTPMM 730
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-----VVL 537
+ EE S +N EA R ++GV +DIG+ITPY Q +
Sbjct: 731 FWSNLGNEEISASGTSYLNRTEASNVEKVVTRFFKAGVKPADIGVITPYEGQRSYIVTTM 790
Query: 538 LKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+NVA+TRA+
Sbjct: 791 QNTGTFKKESYKEVEVASVDAFQGREKDYIVLSCVRSNENQGIGFLSDPRRLNVALTRAK 850
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
++ + + ++ L+ +F++H + G
Sbjct: 851 YGIVILGNPKVLAKHELWYHLLVHFKDHKCLVEG 884
>gi|62087184|dbj|BAD92039.1| immunoglobulin mu binding protein 2 variant [Homo sapiens]
Length = 629
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 148/231 (64%), Gaps = 13/231 (5%)
Query: 418 GLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS---------- 467
GL +L ERLA+ YG V LTVQYRMH+ IM W+S +Y ++ AH S
Sbjct: 53 GLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLP 112
Query: 468 GVKRTSSTEPTLLLIDIAGCDMEEKKDE-EDSTMNEGEAEVAMAHAKRLIQSGVHASDIG 526
GV T T LLL+D AGC + E ++E E S N GE + H + L+ +GV A DI
Sbjct: 113 GVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIA 172
Query: 527 IITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR 586
+++PY QV LL+ +S + +E+ +VDGFQGREKEA+I+S VRSN K EVGFL++
Sbjct: 173 VVSPYNLQVDLLR--QSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAED 230
Query: 587 RRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEYLNE 637
RR+NVAVTRARR ++CD+ TV++ FLK L+EYF +H E + EYL++
Sbjct: 231 RRINVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDD 281
>gi|412990683|emb|CCO18055.1| ATP-dependent helicase NAM7 [Bathycoccus prasinos]
Length = 1020
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 184/659 (27%), Positives = 315/659 (47%), Gaps = 76/659 (11%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
++ +V PLI +E + D +QK+ + N+ V GL + ++ F
Sbjct: 277 QYQNVFGPLIAIEAD--------------YDKSQKESQHMGNVS-VRWDVGLNARRVMYF 321
Query: 77 QSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVV--YRLKDSSITVAFD-----DI 129
+ + G V +LK D G G V Y +K+ I + D D
Sbjct: 322 GFSSDEEHLKILLGDELVAILK--SVDGREIWRGDGTVIRYNVKEEEIGLELDARSCVDA 379
Query: 130 PEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI--PVLFGEQKPTVLKK- 186
P + S +E + V+Y R + AL + V + +G I +L + +V+
Sbjct: 380 PVH-VTSGYEIECVWKSVSYDRCQAALKAFA--VDDTSVSGYIYHKLLGHDVNESVMHHR 436
Query: 187 ----DIAFK-----PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV 237
D++ K P L+HSQ A+ L + + ++ GPPGTGKT T I+
Sbjct: 437 GSNIDVSGKQKWSAPNLPELNHSQIAAVKMVLQ-QPLSLIQGPPGTGKTVTSATIVYHLA 495
Query: 238 KRG-SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSS 296
+G +++ A SN+AVD + E++ +++VR+ +R + + SA++ L
Sbjct: 496 TKGDGQVIVAAPSNVAVDQLAEKIEKTGLKVVRIVARSR---EHVNSAVEHLALHYQVQR 552
Query: 297 LASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAV----TDVIKNADV 352
+A K NG+L K + ++ + LS+E+ KR A+ D+I+NADV
Sbjct: 553 IAE------KEKNGQLAKLQ------RLKDSIGELSQEDEKRYYKALKKIENDIIQNADV 600
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS 411
V T GA R+L+ F V+ DE+ QA E I ++ G++ ++ GDH QL P V
Sbjct: 601 VCVTAVGAGDRRLEKYRFRQVLFDESTQATEPETLIPIIMGAKQVVMVGDHCQLGPVVTC 660
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
A + GL ++LFERL ++ L VQYRMH + + S Y ++ + +R
Sbjct: 661 RSASRAGLSQSLFERL--IFMGVQPIRLQVQYRMHPCLSEFPSNAFYEGTLQNGVTEAER 718
Query: 472 TSSTE------PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDI 525
S + P+ ++ A +EE S +N GEA L+Q+G+ +I
Sbjct: 719 ADSEDVFPWPCPSKPMLFWAQMGVEEMSASGYSYLNRGEAYAVEKIVTHLLQNGIAPEEI 778
Query: 526 GIITPYAAQVVLLKILRSKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEV 580
G++TPY Q + ++ L + +EV++VD FQGREK+ II++ VRSN ++ +
Sbjct: 779 GVVTPYEGQRAYVVNYLTRTGVLHPSIYQEVEVASVDAFQGREKQYIIVTCVRSNDRQGI 838
Query: 581 GFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSEY--LNE 637
GFL+D RR+NVA+TRA+ +V + + ++ + ++++F ++ + G+ LNE
Sbjct: 839 GFLNDPRRLNVALTRAKLGLMIVGNPKVLAKQPLFRDMLQHFRDNKCLVEGNNINQLNE 897
>gi|393245688|gb|EJD53198.1| ATP dependent helicase [Auricularia delicata TFB-10046 SS5]
Length = 1072
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 150/444 (33%), Positives = 231/444 (52%), Gaps = 36/444 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+HSQ A+ K++ K + ++ GPPGTGKT T I+ K ++L CA SN+AVD
Sbjct: 437 LNHSQMYAV-KSVLQKPLSLIQGPPGTGKTVTSASIVYHLAKMNHGQVLVCAPSNVAVDQ 495
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + L+S++ L ++ S + + KL++
Sbjct: 496 LTEKIHATGLKVVRLTAKSR---EALDSSISFLTLHQQVANSTSHVELQ------KLIQL 546
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDL 372
K++ Q EL S +ERK + L T +++ ADV+ TT GA +L F
Sbjct: 547 KNE------QGELS--SNDERKYKALVRTCEKEILAAADVICTTCVGAGDLRLSKFKFRT 598
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDEA QA E C I L+ G + +L GDH QL P + + +A + GL ++LFERL L
Sbjct: 599 VLIDEATQAAEPECMIPLVLGCKQAVLVGDHQQLGPVIMNKKAARAGLTQSLFERLV-LI 657
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST------EPTLLLIDIA 485
G+ L VQYRMH + + S Y ++ + +R P +
Sbjct: 658 GNRPIR-LQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPAPDTPMFFYQ 716
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA + +SGV S IG+ITPY Q V ++
Sbjct: 717 NLGQEEISSSGTSFLNRTEAANVEKIVTKFFKSGVVPSQIGVITPYEGQRSYIVNYMQFN 776
Query: 542 RS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S K D K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRA+
Sbjct: 777 GSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGV 836
Query: 601 CLVCDTETVSSDGFLKRLIEYFEE 624
++ + + +S L+ +++E
Sbjct: 837 VILGNPKVLSKHPLWHYLLTHYKE 860
>gi|350629790|gb|EHA18163.1| hypothetical protein ASPNIDRAFT_119246 [Aspergillus niger ATCC
1015]
Length = 1071
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 235/448 (52%), Gaps = 44/448 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ K++ + + ++ GPPGTGKT T II K G ++L CA SN+AVD
Sbjct: 419 LNGSQINAV-KSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQ 477
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ ER+ ++ VR+ +R + +ES + SL +R + N +L+K
Sbjct: 478 LCERIHRTGLKTVRVTAKSR---EDVESPVGFL-------SLHEQVR--INDTNIELIKL 525
Query: 316 KDKNTRREIQKELRTLSKEERKR-QQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+++ EL LS ++ KR +QL A +++ NADV+ T GA +L F
Sbjct: 526 N------QLKAELGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFR 579
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL L
Sbjct: 580 TVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 639
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS---------STEPTLLL 481
+ L VQYRMH + + S Y ++ S +R + P +
Sbjct: 640 GCSPIR--LNVQYRMHPCLSEFPSNMFYEGSLQNGISSFERLRRDVDFPWPIADNPMMFW 697
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKI 540
++ EE S +N EA R ++GV DIGIITPY Q ++
Sbjct: 698 SNLGN---EEISASGTSYLNRTEATNVEKIVTRFFKAGVQPQDIGIITPYEGQRSYIVSS 754
Query: 541 LRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
+++ K + K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRA
Sbjct: 755 MQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 814
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+ ++ + + +S L+++F+E
Sbjct: 815 KYGLAILGNPKVLSKHPLWNCLLQHFKE 842
>gi|353238887|emb|CCA70818.1| related to SEN1 protein [Piriformospora indica DSM 11827]
Length = 1917
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 172/506 (33%), Positives = 248/506 (49%), Gaps = 88/506 (17%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII----------LQEVKRGS----- 241
L++ Q A+ +L ++ ++ GPPGTGKT+T+ ++ + G
Sbjct: 1282 LNYPQARAVLSSLHTRGFSLIQGPPGTGKTSTICGLVGAFLSSRDSATTSITVGGPSQKP 1341
Query: 242 ---KILACAASNIAVDNIVERLVPH-----------RVRLVRLGHPARLLPQVLESALDA 287
K+L CA SN A+D + R+ H R ++VRLG + + V + +LD
Sbjct: 1342 IPRKVLVCAPSNAAIDEVARRI--HEGVWKSDGQRTRPQVVRLGPISAMSLGVRDISLDR 1399
Query: 288 QV---LRGDNSSLASDIRKEMKALNGKLLKTK-------------DKNTRR--EIQKELR 329
V L G S+ D E+ +L G+L K + NT R E+ +ELR
Sbjct: 1400 MVENRLSGTEST-GEDSSIEVSSLRGRLAHIKQLRHEKQMELSAVNDNTARALELDRELR 1458
Query: 330 TLSK----------------EERKR-----QQLAVTDVIKNADVVLTTLTGAVSRKLDNT 368
L+ +ER R ++ A +++ ADVV TL+G+ +D T
Sbjct: 1459 ELTSNRTQLTSQLNAALDKGKERMRAADSAKRKARVEILSEADVVCCTLSGSGHEFIDRT 1518
Query: 369 SFDLVIIDEAAQALEIACWIAL-LKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERL 427
FDLVIIDEAAQA+E++ I L RCIL GD QLPPTV S A K G R+LF RL
Sbjct: 1519 EFDLVIIDEAAQAIELSSLIPLKFASQRCILVGDPQQLPPTVLSQTATKMGYNRSLFVRL 1578
Query: 428 ADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT------SSTEPTLLL 481
D D + +L++QYRMH I S Y K++ P +T S L
Sbjct: 1579 QDSMPDRI-HLLSIQYRMHPEISRLPSVLFYERKLQDGPDMAVKTRRPWHDDSNLGVYRL 1637
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD--IGIITPYAAQVVLLK 539
DI G EE+ D S N E + A+ KRL + ++ IGII+ Y AQ+ L+
Sbjct: 1638 FDIRG--NEEQADLGYSQYNLAEVKAALELYKRLSATLRTPTEVTIGIISMYRAQLTKLR 1695
Query: 540 ---ILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSK-KEVGFLSDRRRMNVAVTR 595
I R + L ++ +TVDGFQG+EK+ II+S VR+ +GFLSD RR+NVA+TR
Sbjct: 1696 DAFIARYGREILSKVDFNTVDGFQGQEKDVIILSCVRAGPNVSSIGFLSDARRINVAITR 1755
Query: 596 ARRQCCLVCDTETV-SSDGFLKRLIE 620
R ++ D T+ SD ++IE
Sbjct: 1756 CRSSLFILGDAATLRRSDQLWSKIIE 1781
>gi|358371937|dbj|GAA88543.1| regulator of nonsense transcripts [Aspergillus kawachii IFO 4308]
Length = 1072
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 235/448 (52%), Gaps = 44/448 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ K++ + + ++ GPPGTGKT T II K G ++L CA SN+AVD
Sbjct: 419 LNGSQINAV-KSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQ 477
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ ER+ ++ VR+ +R + +ES + SL +R + N +L+K
Sbjct: 478 LCERIHRTGLKTVRVTAKSR---EDVESPVGFL-------SLHEQVR--INDTNIELIKL 525
Query: 316 KDKNTRREIQKELRTLSKEERKR-QQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+++ EL LS ++ KR +QL A +++ NADV+ T GA +L F
Sbjct: 526 N------QLKAELGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFR 579
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL L
Sbjct: 580 TVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 639
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS---------STEPTLLL 481
+ L VQYRMH + + S Y ++ S +R + P +
Sbjct: 640 GCSPIR--LNVQYRMHPCLSEFPSNMFYEGSLQNGISSFERLRRDVDFPWPIADNPMMFW 697
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKI 540
++ EE S +N EA R ++GV DIGIITPY Q ++
Sbjct: 698 SNLGN---EEISASGTSYLNRTEATNVEKIVTRFFKAGVQPQDIGIITPYEGQRSYIVSS 754
Query: 541 LRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
+++ K + K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRA
Sbjct: 755 MQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 814
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+ ++ + + +S L+++F+E
Sbjct: 815 KYGLAILGNPKVLSKHPLWNCLLQHFKE 842
>gi|50551471|ref|XP_503209.1| YALI0D23881p [Yarrowia lipolytica]
gi|49649077|emb|CAG81409.1| YALI0D23881p [Yarrowia lipolytica CLIB122]
Length = 964
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 165/516 (31%), Positives = 246/516 (47%), Gaps = 46/516 (8%)
Query: 133 GLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTV-----LKK 186
G + P LE + N++TYRRM+ AL + + +G I L G P L +
Sbjct: 349 GESHPFALEFVWNDITYRRMQQALKLFA--TDDYSVSGYIYHNLLGHDIPETFLDVPLPE 406
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIIL-------QEVKR 239
+ FN L+ SQ +A+ + L + ++ GPPGTGKT II Q ++
Sbjct: 407 QFSISGFNE-LNVSQVNAVKQVLR-RPFSLIQGPPGTGKTVVSTTIIYHLANIRRQNPEK 464
Query: 240 GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPAR-LLPQVLESALDAQVLRGDNSSLA 298
GSKIL CA SN+AVD + ER+ + ++RL +R + +E LR +
Sbjct: 465 GSKILVCAPSNVAVDQLAERIASTGIDVLRLTARSRESMSSSVEHLTIQHALRHGDHGFT 524
Query: 299 SDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLT 358
R + KL + KD+ E KE K ++ A +I+ A+V+ T +
Sbjct: 525 ---RLQ------KLFELKDELGEFSAADE-----KEFAKLEKKASEAIIRKAEVICCTCS 570
Query: 359 GAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKK 417
A + KL N +F V+IDE QA E C I L+ G + + GDH QL P + + +A
Sbjct: 571 TAGNFKLQNLTFSAVLIDEVTQASEPECLIPLVHGCKQVVFVGDHQQLGPVILNSKAANA 630
Query: 418 GLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT----- 472
GL ++LFERL L G V L VQYRMH + + S Y ++ + R
Sbjct: 631 GLNKSLFERLI-LIG-HVPIRLMVQYRMHPSLSEFPSNMFYEGSLQNGVTTASRVLKYVD 688
Query: 473 -SSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPY 531
+P ++ + EE S +N EA RL + GV IG++TPY
Sbjct: 689 FPWPQPQHPMLFWSNLGQEEISASGTSFLNRTEAANCERIVTRLFKCGVAPDQIGVVTPY 748
Query: 532 AAQVVLLKILR----SKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR 586
Q + S D+ + K +EV +VD FQGREK+ II++ VRS+ +GFLSD
Sbjct: 749 EGQRAYVTQYMVSSGSVDEAMYKGVEVQSVDAFQGREKDFIILTCVRSSKTGGIGFLSDP 808
Query: 587 RRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 622
RR+NVA+TRA+ ++ + ++ LI YF
Sbjct: 809 RRLNVALTRAKYGLIILGNPHVLARHPLWLHLITYF 844
>gi|145240145|ref|XP_001392719.1| regulator of nonsense transcripts 1 [Aspergillus niger CBS 513.88]
gi|134077233|emb|CAK45574.1| unnamed protein product [Aspergillus niger]
Length = 1072
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 235/448 (52%), Gaps = 44/448 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ K++ + + ++ GPPGTGKT T II K G ++L CA SN+AVD
Sbjct: 419 LNGSQINAV-KSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQ 477
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ ER+ ++ VR+ +R + +ES + SL +R + N +L+K
Sbjct: 478 LCERIHRTGLKTVRVTAKSR---EDVESPVGFL-------SLHEQVR--INDTNIELIKL 525
Query: 316 KDKNTRREIQKELRTLSKEERKR-QQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+++ EL LS ++ KR +QL A +++ NADV+ T GA +L F
Sbjct: 526 N------QLKAELGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFR 579
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL L
Sbjct: 580 TVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 639
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS---------STEPTLLL 481
+ L VQYRMH + + S Y ++ S +R + P +
Sbjct: 640 GCSPIR--LNVQYRMHPCLSEFPSNMFYEGSLQNGISSFERLRRDVDFPWPIADNPMMFW 697
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKI 540
++ EE S +N EA R ++GV DIGIITPY Q ++
Sbjct: 698 SNLGN---EEISASGTSYLNRTEATNVEKIVTRFFKAGVQPQDIGIITPYEGQRSYIVSS 754
Query: 541 LRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
+++ K + K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRA
Sbjct: 755 MQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 814
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+ ++ + + +S L+++F+E
Sbjct: 815 KYGLAILGNPKVLSKHPLWNCLLQHFKE 842
>gi|367008616|ref|XP_003678809.1| hypothetical protein TDEL_0A02660 [Torulaspora delbrueckii]
gi|359746466|emb|CCE89598.1| hypothetical protein TDEL_0A02660 [Torulaspora delbrueckii]
Length = 908
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 174/547 (31%), Positives = 280/547 (51%), Gaps = 45/547 (8%)
Query: 110 GQGVVYRLKDS---SITVAFD---DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGV 163
G+G + RL +S T+ P L + E + +Y RM+DAL + +
Sbjct: 278 GRGYIVRLPNSMQDEFTLELKPSKQPPPTHLGTGFTAEFIWKGTSYDRMQDALKKFALD- 336
Query: 164 QNGPAAGLIPVLFGEQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLH 218
+ + L + G Q + L K+ + K F + L+ SQ A+ L + + ++
Sbjct: 337 KKSISGFLYYKILGHQIVDIQFEVNLPKEFSIKHF-AQLNASQSHAVEHVLQ-RPLSLIQ 394
Query: 219 GPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLL 277
GPPGTGKT T I+ K +IL CA SN+AVD++ +L +++VRL +R
Sbjct: 395 GPPGTGKTVTSATIVYHLSKMHNERILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSR-- 452
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERK 337
+ +ES++ L ++ +A + E+K KLL+ K++ I + + K RK
Sbjct: 453 -EDVESSVSNLAL---HNLVARSSKGELK----KLLRLKEEVGELSI-GDTKKFVKLVRK 503
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-C 396
+ ++++K ADVV T GA ++LD T F V+IDE+ QA E C I ++KG++
Sbjct: 504 TE----SEILKKADVVCCTCVGAGDKRLD-TRFRTVLIDESTQASEPECLIPIVKGAKQI 558
Query: 397 ILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQ 456
IL GDH QL P + +A GL ++LFERL L V L VQYRM+ ++ ++ S
Sbjct: 559 ILVGDHQQLGPVILERKAGDAGLKQSLFERLIAL--GHVPLRLEVQYRMNPYLSDFPSNV 616
Query: 457 LYNSKIKAHPSGVKRT--SSTEPTLL----LIDIAGCDMEEKKDEEDSTMNEGEAEVAMA 510
Y ++ + +RT +ST P + ++ A EE S +N EA
Sbjct: 617 FYEGSLQNGVTIEQRTVTNSTFPWPIHGVPMMFWANYGREEISANGTSYLNRIEAMNCER 676
Query: 511 HAKRLIQSGVHASDIGIITPYAAQ-VVLLKILRSKD----DKLKNMEVSTVDGFQGREKE 565
RL + GV IG+ITPY Q +L+ ++ D ++EV++VD FQGREK+
Sbjct: 677 IITRLFKDGVKPEQIGVITPYEGQRAFILQYMQMNGSLDRDLYLSVEVASVDAFQGREKD 736
Query: 566 AIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEH 625
II+S VR+N ++ +GFLSD RR+NV +TRA+ ++ + +S++ L+ +F E
Sbjct: 737 YIILSCVRANEQQIIGFLSDPRRLNVGLTRAKYGLVILGNPRALSTNALWNNLLIHFREK 796
Query: 626 AEYLSGS 632
+ GS
Sbjct: 797 GCLVEGS 803
>gi|348500490|ref|XP_003437806.1| PREDICTED: regulator of nonsense transcripts 1-like [Oreochromis
niloticus]
Length = 1109
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 174/558 (31%), Positives = 273/558 (48%), Gaps = 50/558 (8%)
Query: 101 KADLGSPALGQGVVYRLKDS---SITVAFDDIPEEGLNSP--LRLEKLANEVTYRRMKDA 155
K DL P G G V ++ D+ I + + P +++ + ++ RM+ A
Sbjct: 346 KGDLAPPWKGIGHVIKVPDNYGDEIAIELRSSAGAPVEIPHIFQVDFVWKSTSFDRMQSA 405
Query: 156 LIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKKDIAFKPFNS----NLDHSQKDAISKALS 210
L + V +G I L G + V+ K K F + +L+HSQ A+ K +
Sbjct: 406 LKTFA--VDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAV-KTVL 462
Query: 211 SKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVDNIVERLVPHRVRLVR 269
+ + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD + E++ +++VR
Sbjct: 463 QRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVR 522
Query: 270 LGHPARLLPQVLESALDAQV--LRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKE 327
L +R A+D+ V L N + D E++ KL + KD+ E
Sbjct: 523 LCAKSR-------EAIDSPVSFLALHNQTRNMDSMPELQ----KLQQLKDET------GE 565
Query: 328 LRTLSKEERKR--QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIA 385
L + S E+R R ++ A +++ NADV+ T GA +L F ++IDE+ QA E
Sbjct: 566 LSS-SDEKRYRALRRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPE 624
Query: 386 CWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYR 444
C + ++ G++ IL GDH QL P V +A K GL ++LFERL L + L VQYR
Sbjct: 625 CMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR--LQVQYR 682
Query: 445 MHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIAGCDMEEKKDEEDS 498
MH + + S Y ++ + R +P + EE S
Sbjct: 683 MHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTS 742
Query: 499 TMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKILRSKDDKL-KNMEV 553
+N EA RL+++G IGIITPY Q V ++ S KL + +E+
Sbjct: 743 YLNRTEAANVEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEI 802
Query: 554 STVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG 613
++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR +V + + +S
Sbjct: 803 ASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQP 862
Query: 614 FLKRLIEYFEEHAEYLSG 631
L+ Y++E + G
Sbjct: 863 LWNHLLNYYKEQKVLVEG 880
>gi|440792662|gb|ELR13871.1| mRNA decay factorlike protein [Acanthamoeba castellanii str. Neff]
Length = 1142
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 151/452 (33%), Positives = 234/452 (51%), Gaps = 34/452 (7%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+HSQ A+ K++ K + ++ GPPGTGKT T + Q VK+ ++L CA SN+AVD
Sbjct: 499 LNHSQVAAV-KSVLQKPLSLIQGPPGTGKTVTSASTVYQLVKQNQGQVLVCAPSNVAVDQ 557
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLAS-DIRKEMKALNGKLLK 314
+ E++ +++VRL +R + + S ++ L LAS I K A KL +
Sbjct: 558 LTEKIHATGLKVVRLCAKSR---EAVSSPVEFLTLHYLVKHLASGSIDKGELA---KLQQ 611
Query: 315 TKDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFD 371
KD Q EL S +E+K + L + +++++ADV+ T GA +L N F
Sbjct: 612 LKDD------QGELS--SADEKKFKSLKRSMEREILQSADVICCTCVGAGDPRLTNFRFR 663
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ QA E C + L+ G++ I GDH QL P + +A + GL ++LFERL L
Sbjct: 664 QVLIDESTQATEPECLLPLVLGAKQVIFVGDHCQLGPVIMCKKAARAGLSQSLFERLIML 723
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST------EPTLLLIDI 484
+ L VQYRMH + + S Y ++ + +R P +
Sbjct: 724 GVRPIR--LQVQYRMHPCLSEFPSNTFYEGTLQNGVTAAERNQGALDFPWPVPNKPMFFY 781
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSK 544
EE S +N EA V +Q+GV ++ IG+ITPY Q L +
Sbjct: 782 NCLGQEEISSSGTSYLNRNEAAVCEKIVTHFLQAGVTSAQIGVITPYEGQRAYLVNYMQR 841
Query: 545 DDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 599
+ L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRA+
Sbjct: 842 NGSLRSQLYKEIEVASVDSFQGREKDFIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYG 901
Query: 600 CCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
++ + + +S L+ +F+E+ + G
Sbjct: 902 VVVLGNAKVLSRQPLWNNLLVHFKENGCLVEG 933
>gi|134115759|ref|XP_773593.1| hypothetical protein CNBI2070 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256219|gb|EAL18946.1| hypothetical protein CNBI2070 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 952
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 151/465 (32%), Positives = 238/465 (51%), Gaps = 55/465 (11%)
Query: 190 FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIIL---QEVKRGSKILAC 246
+ P N + +S+ALS ++ GPPGTGKT +VE I + IL C
Sbjct: 456 YVPLNRTQLRAMGMMLSEALS-----LVQGPPGTGKTRVIVETIKLLKHHFQIPHPILVC 510
Query: 247 AASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
A +N+AVDN++ +V H V+ +R G R+ + + L ++ + + ++ K
Sbjct: 511 AHTNVAVDNLLAGMVKHGVKAIRTGMAERVPTDLKQYTLGIKMESHPMWTCVQTMTEKTK 570
Query: 307 ALNGKLLKTKDKNTRREIQK-ELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKL 365
L ++ + N R+ + EL+ + ++ QQ +++ +ADVV TT A+S L
Sbjct: 571 RLKDEIFRLDFGNPERQQKSSELKKIWRQIWGIQQSITRELLLDADVVCTTCISAISANL 630
Query: 366 DNTSFDLVIIDEAAQALEIACWIALLKGSRCI-LAGDHLQLPPTVQSVEAEKKGLGRTLF 424
++ F +V +DEA+ A E + L+KGS + + GDH QLPP + S +A GL +LF
Sbjct: 631 NSIDFPIVFLDEASMATEPLTLLPLMKGSSHVAIIGDHKQLPPVIVSQDAHAGGLSTSLF 690
Query: 425 ERLADLYGDEVTS-MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEP-TLLLI 482
ERL ++ V S ML QYRMH + +SSK Y+S +K +G + P T LI
Sbjct: 691 ERL--IHEKNVPSIMLDTQYRMHPSLAAFSSKTFYSSLLK---NGTPASERPPPETAFLI 745
Query: 483 ------DIAGCDMEEKKDEEDSTM---------------NEGEAEVAMAHAKRLIQSG-- 519
D + ++ ++ + T NEGEAE+ + L+
Sbjct: 746 PEDPIPDPSTGELRLSGEKTNLTFLNHSHLESPVLQSMANEGEAEIIVDVVTDLLHKNPD 805
Query: 520 VHASDIGIITPYAAQVVLL--------------KIL-RSKDDKLKNMEVSTVDGFQGREK 564
+ S IGII PY Q+ +L +IL + ++++++E+ TVDGF+GREK
Sbjct: 806 LKGSQIGIIAPYLGQIKVLSETLFASETQDSLKRILGDERTEEIQDVEIKTVDGFEGREK 865
Query: 565 EAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
E II S VRSN+ +GFL D RR+NV +TRARR +V + ET+
Sbjct: 866 EVIIFSTVRSNAGGYIGFLGDWRRVNVGLTRARRALIMVGNKETL 910
>gi|367000487|ref|XP_003684979.1| hypothetical protein TPHA_0C03950 [Tetrapisispora phaffii CBS 4417]
gi|357523276|emb|CCE62545.1| hypothetical protein TPHA_0C03950 [Tetrapisispora phaffii CBS 4417]
Length = 990
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 172/529 (32%), Positives = 273/529 (51%), Gaps = 55/529 (10%)
Query: 130 PEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPV-LFGEQKPTVLKKDI 188
P L + E + +Y RM+DAL + V +G + + G + VL DI
Sbjct: 353 PPIHLGTGFTAEFIWKGTSYDRMQDALKTFA--VDKKSISGYLYYKILGHE---VL--DI 405
Query: 189 AFK---------PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK- 238
AF P + L+ SQ A++ L K + ++ GPPGTGKT T I+ K
Sbjct: 406 AFDVPIPKELSIPHFAQLNASQASAVANVLQ-KPLSLIQGPPGTGKTVTSATIVYHLSKS 464
Query: 239 RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLA 298
+IL CA SN+AVD++ +L +++VRL +R + +ES++ N +L
Sbjct: 465 HKDRILVCAPSNVAVDHLATKLRDLGLKVVRLTAKSR---EDVESSVS-------NLALH 514
Query: 299 SDIRKEMKALNGKLLKTKDKN---TRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLT 355
+ + + K KLLK K++ + + +K ++ L K E ++++K ADVV
Sbjct: 515 NLVARAAKGELRKLLKLKEEVGELSASDTKKFVKLLRKTE--------SEIMKKADVVCC 566
Query: 356 TLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEA 414
T GA ++LD T F V+IDE+ QA E C I ++KG++ IL GDH QL P + +A
Sbjct: 567 TCVGAGDKRLD-TKFRTVLIDESTQASEPECLIPIIKGAKQVILVGDHQQLGPVILERKA 625
Query: 415 EKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT-- 472
GL ++LFERL L + L VQYRM+ ++ + S Y ++ + +RT
Sbjct: 626 GDAGLKQSLFERLISL--GHIPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVS 683
Query: 473 SSTEPTLL----LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
+S+ P + ++ A EE S +N EA +L + GV IG+I
Sbjct: 684 ASSFPWPIHEIPMMFWANFGREEISANGTSYLNRIEAMNCERIITKLFKDGVKPEQIGVI 743
Query: 529 TPYAAQ-VVLLKILR---SKDDKLK-NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFL 583
TPY Q +L+ ++ S D +L N+EV++VD FQGREK+ II+S VR+N ++ +GFL
Sbjct: 744 TPYEGQRAYILQYMQMNGSLDKELYINVEVASVDAFQGREKDYIILSCVRANEQQAIGFL 803
Query: 584 SDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
SD RR+NV +TRA+ ++ + ++S + L+ +F E + GS
Sbjct: 804 SDPRRLNVGLTRAKYGLVILGNPRSLSRNSLWNHLLIHFREKGCLVEGS 852
>gi|407927468|gb|EKG20360.1| ATPase AAA+ type core [Macrophomina phaseolina MS6]
Length = 1086
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 236/451 (52%), Gaps = 50/451 (11%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ K++ K + ++ GPPGTGKT T II K G ++L CA SN+AVD
Sbjct: 438 LNGSQINAV-KSVLQKPLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQ 496
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ ER+ ++ VR+ +R + +ES + SL +R M N +L
Sbjct: 497 LCERIHRTGLKTVRVTAKSR---EDVESPVGFL-------SLHEQVR--MNDTNVEL--- 541
Query: 316 KDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
N +++ EL LS ++E+K +QL A +++ NADV+ T GA +L F
Sbjct: 542 ---NKLNQLKSELGELSSQDEKKFKQLTRAAEREILTNADVICCTCVGAGDPRLAKFKFR 598
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL L
Sbjct: 599 TVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 658
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS------------STEPT 478
+ L VQYRMH + + S Y ++ +GV R S P
Sbjct: 659 GCAPIR--LQVQYRMHPCLSEFPSNMFYEGSLQ---NGVTRESRMRKEVDFPWPVGDSPM 713
Query: 479 LLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVL 537
+ ++ EE S +N EA R ++GV DIGIITPY Q +
Sbjct: 714 MFWSNLGN---EEISASGTSYLNRTEAANVEKIVTRFFKAGVKPQDIGIITPYEGQRSYV 770
Query: 538 LKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAV 593
++ +++ K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+NVA+
Sbjct: 771 VQSMQANGTFKKENYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVAL 830
Query: 594 TRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
TRA+ ++ + + +S L+ +F+E
Sbjct: 831 TRAKYGLVILGNPKVLSKHPLWHYLLLHFKE 861
>gi|47216421|emb|CAG01972.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1123
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 190/642 (29%), Positives = 300/642 (46%), Gaps = 68/642 (10%)
Query: 17 EFVSVMAPLIDLE-------KEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLM 69
++ ++ PL+ LE KE++ +IT L+ KK L D+ LM
Sbjct: 280 QYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN---KKRIAYFTLPKTDSDMRLM 336
Query: 70 --GKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L + KGD+ P K G V+ + N D + L+ S+ A
Sbjct: 337 QGDEICLRY---KGDLAPPWK-GIGHVIKVPDNYGD--------EIAIELRSSA--GAPI 382
Query: 128 DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKK 186
+IP +++ + ++ RM+ AL + V +G I L G + V+ K
Sbjct: 383 EIPHN-----FQVDFVWKSTSFDRMQSALKTFA--VDETSVSGYIYHKLLGHEVEDVVIK 435
Query: 187 DIAFKPFNS----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS- 241
K F + +L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+
Sbjct: 436 CQLPKRFTAQGLPDLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNG 494
Query: 242 KILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDI 301
+L CA SNIAVD + E++ +++VRL +R + ++S + L ++ S
Sbjct: 495 PVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSR---EAIDSPVSFLALHNQTRNMES-- 549
Query: 302 RKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAV 361
M L KL + KD+ E K R ++ A +++ NADV+ T GA
Sbjct: 550 ---MPELQ-KLQQLKDETGELSSSDE-----KRYRALRRTAERELLMNADVICCTCVGAG 600
Query: 362 SRKLDNTSFDLVIIDEAAQALEIACWI-ALLKGSRCILAGDHLQLPPTVQSVEAEKKGLG 420
+L F ++IDE+ QA E C + A+L + IL GDH QL P V +A K GL
Sbjct: 601 DPRLAKMQFRSILIDESTQATEPECMVPAVLGAKQLILVGDHCQLGPVVMCKKAAKAGLS 660
Query: 421 RTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------ 474
++LFERL L + L VQYRMH + + S Y ++ + R
Sbjct: 661 QSLFERLVVLGIRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTSADRVKKGFDFQW 718
Query: 475 TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ 534
+P + EE S +N EA RL+++G IGIITPY Q
Sbjct: 719 PQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPYEGQ 778
Query: 535 ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRM 589
V ++ S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+
Sbjct: 779 RSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRL 838
Query: 590 NVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
NVA+TRAR +V + + +S L+ Y++E + G
Sbjct: 839 NVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 880
>gi|50509972|dbj|BAD30435.1| putative type 1 RNA helicase [Oryza sativa Japonica Group]
gi|222637078|gb|EEE67210.1| hypothetical protein OsJ_24327 [Oryza sativa Japonica Group]
Length = 1277
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 147/448 (32%), Positives = 231/448 (51%), Gaps = 40/448 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ A+ K++ K + ++ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 513 LNASQVLAV-KSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 571
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + + S ++ L L + + E+ KL +
Sbjct: 572 LAEKISSTGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELH----KLQQL 624
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KD+ Q EL S +E+K + L +++++ADV+ T GA +L N F
Sbjct: 625 KDE------QGELS--SSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLANFRFRQ 676
Query: 373 VIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDE+ QA E C I L+ G + +L GDH QL P + +A + GL ++LFERL L
Sbjct: 677 VLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL- 735
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---------TEPTLLLI 482
L VQYRMH + ++ S Y ++ + +R + P +
Sbjct: 736 -GVKPFRLQVQYRMHPCLSDFPSNCFYEGTLQNGVTVNERQTPGIDFPWPVPNRPMFFYV 794
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+ EE S +N EA ++SGV S IG+ITPY Q +
Sbjct: 795 QMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYM 851
Query: 543 SKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
S++ L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 852 SRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 911
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEH 625
++ + + +S L+ +++EH
Sbjct: 912 YGIVILGNPKVLSKQPLWNSLLTHYKEH 939
>gi|115472199|ref|NP_001059698.1| Os07g0495900 [Oryza sativa Japonica Group]
gi|113611234|dbj|BAF21612.1| Os07g0495900, partial [Oryza sativa Japonica Group]
Length = 1121
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 147/448 (32%), Positives = 231/448 (51%), Gaps = 40/448 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ A+ K++ K + ++ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 357 LNASQVLAV-KSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 415
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + + S ++ L L + + E+ KL +
Sbjct: 416 LAEKISSTGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELH----KLQQL 468
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KD+ Q EL S +E+K + L +++++ADV+ T GA +L N F
Sbjct: 469 KDE------QGELS--SSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLANFRFRQ 520
Query: 373 VIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDE+ QA E C I L+ G + +L GDH QL P + +A + GL ++LFERL L
Sbjct: 521 VLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL- 579
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---------TEPTLLLI 482
L VQYRMH + ++ S Y ++ + +R + P +
Sbjct: 580 -GVKPFRLQVQYRMHPCLSDFPSNCFYEGTLQNGVTVNERQTPGIDFPWPVPNRPMFFYV 638
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+ EE S +N EA ++SGV S IG+ITPY Q +
Sbjct: 639 QMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYM 695
Query: 543 SKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
S++ L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 696 SRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 755
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEH 625
++ + + +S L+ +++EH
Sbjct: 756 YGIVILGNPKVLSKQPLWNSLLTHYKEH 783
>gi|218199657|gb|EEC82084.1| hypothetical protein OsI_26082 [Oryza sativa Indica Group]
Length = 1277
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 147/448 (32%), Positives = 231/448 (51%), Gaps = 40/448 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ A+ K++ K + ++ GPPGTGKT T I+ K+G ++L CA SN+AVD
Sbjct: 513 LNASQVLAV-KSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 571
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + + S ++ L L + + E+ KL +
Sbjct: 572 LAEKISSTGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELH----KLQQL 624
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KD+ Q EL S +E+K + L +++++ADV+ T GA +L N F
Sbjct: 625 KDE------QGELS--SSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLANFRFRQ 676
Query: 373 VIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDE+ QA E C I L+ G + +L GDH QL P + +A + GL ++LFERL L
Sbjct: 677 VLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL- 735
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---------TEPTLLLI 482
L VQYRMH + ++ S Y ++ + +R + P +
Sbjct: 736 -GVKPFRLQVQYRMHPCLSDFPSNCFYEGTLQNGVTVNERQTPGIDFPWPVPNRPMFFYV 794
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+ EE S +N EA ++SGV S IG+ITPY Q +
Sbjct: 795 QMG---QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYM 851
Query: 543 SKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
S++ L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 852 SRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 911
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEH 625
++ + + +S L+ +++EH
Sbjct: 912 YGIVILGNPKVLSKQPLWNSLLTHYKEH 939
>gi|444316488|ref|XP_004178901.1| hypothetical protein TBLA_0B05540 [Tetrapisispora blattae CBS 6284]
gi|387511941|emb|CCH59382.1| hypothetical protein TBLA_0B05540 [Tetrapisispora blattae CBS 6284]
Length = 1056
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 177/555 (31%), Positives = 282/555 (50%), Gaps = 61/555 (10%)
Query: 110 GQGVVYRLKDS---SITVAFD---DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGV 163
G+G + RL +S T+ + P L + E + +Y RM+DAL + + +
Sbjct: 384 GRGYIVRLPNSFQDEFTLELKPNKEPPPTHLGTGFTAEFIWKGTSYDRMQDALKKFA--I 441
Query: 164 QNGPAAGLIPV-LFGEQKPTVLKKDIAFK---------PFNSNLDHSQKDAISKALSSKN 213
+G + + G Q DIAF P + L+ SQ +A+ L K
Sbjct: 442 DKKSISGYLYYKILGHQV-----VDIAFDISMPSEFSIPKFAQLNSSQTNAVRNVLQ-KP 495
Query: 214 VFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVDNIVERLVPHRVRLVRLGH 272
+ ++ GPPGTGKT T II K S +IL CA SN+AVD++ +L +++VRL
Sbjct: 496 LSLIQGPPGTGKTVTSATIIYHLSKLHSERILVCAPSNVAVDHLATKLRDLGLKVVRLTA 555
Query: 273 PARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKN---TRREIQKELR 329
+R + +ES++ L ++ +A + E++ KLL+ K++ + + +K ++
Sbjct: 556 KSR---EDVESSVSDLAL---HNLVARSSKGELR----KLLRLKEEVGELSANDTKKFVK 605
Query: 330 TLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIA 389
+ K E ++++K ADVV T GA ++LD T F V+IDE+ QA E C I
Sbjct: 606 LVRKTE--------SEILKKADVVCCTCVGAGDKRLD-TKFRTVLIDESTQASEPECLIP 656
Query: 390 LLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEH 448
++KG++ IL GDH QL P + +A GL ++LFERL L V L VQYRM+
Sbjct: 657 IVKGAKQVILVGDHQQLGPVILERKAGDAGLKQSLFERLISL--GHVPIRLEVQYRMNPF 714
Query: 449 IMNWSSKQLYNSKIKAHPSGVKRT--SSTEPTLL----LIDIAGCDMEEKKDEEDSTMNE 502
+ + S Y ++ + +RT +ST P + ++ A EE S +N
Sbjct: 715 LSEFPSNMFYEGSLQNGVTLDQRTVPTSTFPWPIHDVPMMFWANYGREEISANGTSYLNR 774
Query: 503 GEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILRSK----DDKLKNMEVSTVD 557
EA RL + GV IG+ITPY Q +L+ ++ D N+EV++VD
Sbjct: 775 IEAMNCERVITRLFKDGVKPEQIGVITPYEGQRAYILQYMQMNGTLDKDLYINVEVASVD 834
Query: 558 GFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKR 617
FQGREK+ II+S VR+N ++ +GFLSD RRMNV +TRA+ ++ + ++S +
Sbjct: 835 AFQGREKDYIILSCVRANEQQAIGFLSDPRRMNVGLTRAKYGLVVLGNPRSLSRNILWNH 894
Query: 618 LIEYFEEHAEYLSGS 632
L+ +F + + GS
Sbjct: 895 LLIHFRQKGCLVEGS 909
>gi|58261218|ref|XP_568019.1| DNA helicase [Cryptococcus neoformans var. neoformans JEC21]
gi|57230101|gb|AAW46502.1| DNA helicase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 952
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 151/465 (32%), Positives = 238/465 (51%), Gaps = 55/465 (11%)
Query: 190 FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIIL---QEVKRGSKILAC 246
+ P N + +S+ALS ++ GPPGTGKT +VE I + IL C
Sbjct: 456 YVPLNRTQLRAMGMMLSEALS-----LVQGPPGTGKTRVIVETIKLLKHHFQIPHPILVC 510
Query: 247 AASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
A +N+AVDN++ +V H V+ +R G R+ + + L ++ + + ++ K
Sbjct: 511 AHTNVAVDNLLAGMVKHGVKAIRTGMAERVPTDLKQYTLGIKMESHPMWTCVQTMTEKTK 570
Query: 307 ALNGKLLKTKDKNTRREIQK-ELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKL 365
L ++ + N R+ + EL+ + ++ QQ +++ +ADVV TT A+S L
Sbjct: 571 RLKDEIFRLDFGNPERQQKSSELKKIWRQIWGIQQSITRELLLDADVVCTTCISAISANL 630
Query: 366 DNTSFDLVIIDEAAQALEIACWIALLKGSRCI-LAGDHLQLPPTVQSVEAEKKGLGRTLF 424
++ F +V +DEA+ A E + L+KGS + + GDH QLPP + S +A GL +LF
Sbjct: 631 NSIDFPIVFLDEASMATEPLTLLPLMKGSSHVAIIGDHKQLPPVIVSQDAHAGGLSTSLF 690
Query: 425 ERLADLYGDEVTS-MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEP-TLLLI 482
ERL ++ V S ML QYRMH + +SSK Y+S +K +G + P T LI
Sbjct: 691 ERL--IHEKNVPSIMLDTQYRMHPSLAAFSSKTFYSSLLK---NGTPASERPPPETAFLI 745
Query: 483 ------DIAGCDMEEKKDEEDSTM---------------NEGEAEVAMAHAKRLIQSG-- 519
D + ++ ++ + T NEGEAE+ + L+
Sbjct: 746 PEDPIPDPSTGELRLWGEKTNLTFLNHSHLESPVLQSMANEGEAEIIVDVVTDLLHKNPD 805
Query: 520 VHASDIGIITPYAAQVVLL--------------KIL-RSKDDKLKNMEVSTVDGFQGREK 564
+ S IGII PY Q+ +L +IL + ++++++E+ TVDGF+GREK
Sbjct: 806 LKGSQIGIIAPYLGQIKVLSETLFASETQDSLKRILGDERTEEIQDVEIKTVDGFEGREK 865
Query: 565 EAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
E II S VRSN+ +GFL D RR+NV +TRARR +V + ET+
Sbjct: 866 EVIIFSTVRSNAGGYIGFLGDWRRVNVGLTRARRALIMVGNKETL 910
>gi|325184899|emb|CCA19391.1| RNA helicase putative [Albugo laibachii Nc14]
Length = 1058
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 144/454 (31%), Positives = 237/454 (52%), Gaps = 40/454 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ Q +A+ K + S+ + ++ GPPGTGKT T I+ ++ ++L A SNIAVD+
Sbjct: 449 LNPPQMEAV-KGVLSQPLSLIQGPPGTGKTVTSASIVYHMSRQNMGQVLVTAPSNIAVDH 507
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ ++ +++VRL +R + + +++ L L S + E++ KL++
Sbjct: 508 LTAKISAIGLKVVRLAAKSR---EAVSCSVEHLSLHTMVKLLTSPDKAELR----KLMQL 560
Query: 316 KDKNTRREIQKELRTLSKEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
K+ Q EL S++E+K + L A ++++ ADV+ TT GA +L N F
Sbjct: 561 KND------QGELS--SQDEKKFKSLKRQAEREILQAADVICTTCVGAGDPRLSNFRFRQ 612
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDEA QA E C I +++G++ ++ GDH QL P V + A GL ++LF+RL L
Sbjct: 613 VLIDEATQATEPECLIPIVQGAKHVVMVGDHCQLGPVVMNKRAASAGLNQSLFDRLLKL- 671
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR---------TSSTEPTLLLI 482
D L VQYRMH + + S Y +++ S +R + +PT I
Sbjct: 672 -DHRPFRLRVQYRMHPCLSEFPSNTFYEGELQNGVSSTERQLKNVDFPWPNPNKPTFFYI 730
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+ EE S +N EA ++ GV + IG+ITPY Q +
Sbjct: 731 CLGA---EEISSSGTSYLNRTEASNVEKIVTAFLKCGVLPAQIGVITPYEGQRAYVVNYM 787
Query: 543 SKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
++ + K++EV++VD FQGREK+ II+S VRSN + +GFLSDRRR+NVA+TRA+
Sbjct: 788 QRNGSMRAQLYKDVEVASVDSFQGREKDLIILSCVRSNENQGIGFLSDRRRLNVALTRAK 847
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
++ + ++ RL+ ++ +H + G
Sbjct: 848 YGVIILGNPRVLAKQELWNRLLNHYRDHQLVVEG 881
>gi|357482277|ref|XP_003611424.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355512759|gb|AES94382.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 1253
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 146/448 (32%), Positives = 232/448 (51%), Gaps = 40/448 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ A+ K++ + + ++ GPPGTGKT T ++ K+G ++L CA SN+AVD
Sbjct: 477 LNASQVYAV-KSVLQRPISLIQGPPGTGKTVTSAALVYHMAKQGQGQVLVCAPSNVAVDQ 535
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + + S ++ L L + + E+ KL +
Sbjct: 536 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSDKSELH----KLQQL 588
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDL 372
KD+ Q EL S +E+K + L ++ ++ADV+ T GA +L N F
Sbjct: 589 KDE------QGELS--SSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQ 640
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDE+ QA E C I L+ G++ +L GDH QL P + +A + GL ++LFERL L
Sbjct: 641 VLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 700
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---------TEPTLLLI 482
+ L VQYRMH + + S Y ++ + +R S+ P +
Sbjct: 701 VKPIR--LQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERQSTGIDFPWPVPNRPMFFYV 758
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
+ EE S +N EA ++SGV S IG+ITPY Q +
Sbjct: 759 QMG---QEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYM 815
Query: 543 SKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
S++ L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 816 SRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 875
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEH 625
++ + + +S L+ +++EH
Sbjct: 876 YGIVILGNPKVLSKQPLWNGLLTHYKEH 903
>gi|308807923|ref|XP_003081272.1| RNA helicase, putative (ISS) [Ostreococcus tauri]
gi|116059734|emb|CAL55441.1| RNA helicase, putative (ISS) [Ostreococcus tauri]
Length = 963
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 189/658 (28%), Positives = 312/658 (47%), Gaps = 73/658 (11%)
Query: 1 MEGRKTKEKQSAVSLQ-----EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGST 55
+E ++ E V+LQ ++ ++ PLI LE + D AQ++ T
Sbjct: 239 VEKQEGNEDYQPVALQYEDAYQYQNIFGPLIKLEAD--------------YDKAQRENQT 284
Query: 56 ILNLKCVDAQTGLMGKTLLEFQSTKGDVLPAHKFGTH---DVVVLKPNKADLGSPALGQG 112
N+ + GL + + F + + G +++ PN L GQG
Sbjct: 285 KDNIT-IRWDVGLSKRKIAYFCFGADEEKVSVALGDSLQLRLLMQTPNGPQLWQ---GQG 340
Query: 113 VVYRL---KDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAA 169
VV + ++ + + D P E ++ ++ L +Y R + AL + V +
Sbjct: 341 VVIKFTAQEEVGVEMYGMDAPVES-STGYSVDFLWKGTSYERAQQALKSFA--VDETSCS 397
Query: 170 GLI--PVLFGEQKPTVLKKDIA-----FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPG 222
G I +L E + L D+ P L+ SQ +A+ + L + + ++ GPPG
Sbjct: 398 GYIYHKLLGHEVEDQKLHVDVPKGTKLTAPGLPELNDSQFNAVKEVLE-RPLSLVQGPPG 456
Query: 223 TGKTTTVVEIILQEVKRGS-KILACAASNIAVDNIVERLVPHRVRLVRLGHPAR--LLPQ 279
TGKT T I+ KRG+ +++ CA SN+AVD++ E++ +++VR+ +R L+
Sbjct: 457 TGKTVTSATIVYHLAKRGNGQVIVCAPSNVAVDHLAEKIEKTGLKVVRISSRSREHLVSS 516
Query: 280 VLESALDAQVLR-GDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKR 338
V L QV G + A + +K G+L D+ + QK+L ER
Sbjct: 517 VEHLTLHYQVANIGGATHKAFQKLQALKNECGEL-SPGDEKKYKNAQKKL------ER-- 567
Query: 339 QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CI 397
D+++NADV+ TT GA +L + F +V+IDE+ QA E C I ++ G++ +
Sbjct: 568 ------DILENADVICTTAVGAGDPRLADFRFRMVLIDESTQATEPECLIPIVMGAKHVV 621
Query: 398 LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQL 457
+ GDH QL P V +A GL ++LFERL L + L VQYRMH + ++ S +
Sbjct: 622 MVGDHRQLGPVVTCKQAHAAGLAQSLFERLIALGIKPIR--LGVQYRMHPCLSDFPSNKF 679
Query: 458 YNSKIKAHPSGVKRTSS------TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAH 511
Y + S RT S P+ ++ + EE S +N EA
Sbjct: 680 YEGVLSNGVSASDRTLSHVDFPWPVPSKPMMFWSQTGQEEMSASGTSFLNRAEAVAVEKC 739
Query: 512 AKRLIQSGVHASDIGIITPYAAQ--VVLLKILRS---KDDKLKNMEVSTVDGFQGREKEA 566
L+ SGV DIG++TPY Q V+ + R K+++V++VD FQG+EK+
Sbjct: 740 VTHLLNSGVSPEDIGVVTPYEGQRAYVVQHMTRVGVLHPQLYKDIQVASVDSFQGKEKDF 799
Query: 567 IIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
II++ VRSN K +GFLSD RR+NVA+TRAR ++ + + ++ ++ +F +
Sbjct: 800 IIMTCVRSNEKSGIGFLSDPRRLNVAITRARSGLIIIGNPKVLNKQLLFHDMLTHFRQ 857
>gi|336263126|ref|XP_003346344.1| hypothetical protein SMAC_07821 [Sordaria macrospora k-hell]
gi|380091672|emb|CCC10804.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1093
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 146/447 (32%), Positives = 234/447 (52%), Gaps = 42/447 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ AI + LS+ + ++ GPPGTGKT T II K S++L CA SN+AVD
Sbjct: 456 LNASQIAAIKQVLSNP-LSLIQGPPGTGKTVTSATIIYHLAKMSNSQVLVCAPSNVAVDQ 514
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKL--- 312
+ ER+ +++VRL +R + +ES++ S LA + M N +L
Sbjct: 515 LCERIHRTGLKVVRLTAKSR---EDVESSV---------SFLALHEQVRMNTTNKELDGL 562
Query: 313 --LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
LKT+ + +K + L+++ + ++++NADVV T GA +L F
Sbjct: 563 VKLKTETGELSSQDEKRFKQLTRQAER-------EILQNADVVCCTCVGAGDPRLSKMKF 615
Query: 371 DLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL
Sbjct: 616 RNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVK 675
Query: 430 LYGDEVTSM-LTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT------SSTEPTLLLI 482
L + T + L VQYRMH + + S Y+ ++ + +R P ++
Sbjct: 676 L---QFTPIRLKVQYRMHPCLSEFPSNMFYDGSLQNGVTAAERLRKDVDFPWPVPETPMM 732
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKIL 541
+ EE S +N EA R ++GV +DIG+ITPY Q ++ +
Sbjct: 733 FWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPADIGVITPYEGQRSYIVNTM 792
Query: 542 RS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
++ K + + +EV++VD FQGREKE I++S VRSN + +GFLSD RR+NVA+TRA+
Sbjct: 793 QNTGTFKKESYREVEVASVDAFQGREKEFIVLSCVRSNENQGIGFLSDPRRLNVALTRAK 852
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEE 624
++ + + + L+ +F++
Sbjct: 853 YGLVIIGNPKVLCKHELWHHLLVHFKD 879
>gi|390344703|ref|XP_786803.3| PREDICTED: regulator of nonsense transcripts 1-like
[Strongylocentrotus purpuratus]
Length = 1386
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 146/453 (32%), Positives = 226/453 (49%), Gaps = 40/453 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVDN 255
L+HSQ A+ L+ + + ++ GPPGTGKT T I+ K+G+ ++L CA SNIAVD
Sbjct: 687 LNHSQVSAVRTVLT-RPLSLIQGPPGTGKTVTSASIVYHLAKQGTGQVLVCAPSNIAVDQ 745
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR-----KEMKALNG 310
+ E++ +++VRL +R A+D+ V SL + +R +EM+ L
Sbjct: 746 LTEKIHKTGLKVVRLCAKSR-------EAIDSPV---SFLSLHNQVRNMEGAEEMQKL-- 793
Query: 311 KLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
+ LK + +K RTL + + ++++NADV+ T GA + F
Sbjct: 794 QALKDEMGELSSNDEKRYRTLKRNCER-------ELLQNADVICCTCVGAGDPRFARFRF 846
Query: 371 DLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
V+IDE+ Q+ E C I + GSR +L GDH QL P V +A GL ++LFERL
Sbjct: 847 RAVLIDESTQSTEPECLIPAVLGSRQLVLVGDHCQLGPVVMCKKAANAGLCQSLFERLVV 906
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST------EPTLLLID 483
L + L VQYRMH + + S Y ++ + +R + +P +
Sbjct: 907 LGIRPIR--LQVQYRMHPSLSAFPSNIFYEGSLQNGVTAAERINRAVDFPFPQPDKPMFF 964
Query: 484 IAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRS 543
A EE S +N EA R +++GV IGIITPY Q +
Sbjct: 965 YATTGQEEIASSGTSYLNRTEASNVEKLTTRFLRAGVKPEQIGIITPYEGQRAFIVQYMQ 1024
Query: 544 KDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARR 598
L + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TR R
Sbjct: 1025 YSGPLNVKLYQEVEIASVDAFQGREKDYIILSCVRANDHQGIGFLNDPRRLNVALTRGRY 1084
Query: 599 QCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 1085 GVIIVGNPKVLSRHPLWNHLLSYYKEQKVLVEG 1117
>gi|255088141|ref|XP_002505993.1| predicted protein [Micromonas sp. RCC299]
gi|226521264|gb|ACO67251.1| predicted protein [Micromonas sp. RCC299]
Length = 812
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 168/556 (30%), Positives = 274/556 (49%), Gaps = 51/556 (9%)
Query: 105 GSPALGQGVVYRLKDSSITV-----AFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQL 159
G+ +GVV + D V D P E N ++ L N +++ R + A+
Sbjct: 265 GATWSAEGVVLKFTDREEVVLELRSGSGDAPVEETNG-FSVDFLWNSISFDRAQAAMKAF 323
Query: 160 SKGVQNGPAAGLI-PVLFG---EQKP--TVLKKDIAFKPFNSNLDHSQKDAISKALSSKN 213
+ + +G I +L G E KP L K ++ P L+HSQ+ A ++A+ +
Sbjct: 324 A--LDETSVSGYIYHLLLGHDVEPKPLAVTLPKKLS-APNLPPLNHSQESA-ARAVLQRP 379
Query: 214 VFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDNIVERLVPHRVRLVRLGH 272
+ ++ GPPGTGKT T I+ Q ++ +++ CA SN+AVD + E++ +R+VRL
Sbjct: 380 LSLIQGPPGTGKTVTSATIVYQLAQQHLGQVIVCAPSNVAVDQLAEKIERTGLRVVRLAA 439
Query: 273 PARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLS 332
+R + + S ++ L + L S E K L ++++ EL LS
Sbjct: 440 RSR---EHVASPVEHLTLHYQVAHLDSPETAEFKKL-------------QQLKDELGELS 483
Query: 333 -KEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWI 388
+ER+ ++L ++I ADVV T GA +L + F V++DE+ QA E C I
Sbjct: 484 SNDERRHKRLKRKIEREIIAAADVVCVTAVGAGDPRLADFRFRQVLMDESTQATEPECLI 543
Query: 389 ALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHE 447
L+ G++ ++ GDH QL P V S +A + GLG+++FERL L + L VQYRMH
Sbjct: 544 PLIMGAKQVVMVGDHCQLGPVVTSKKAARAGLGQSMFERLISLGVQPIR--LQVQYRMHP 601
Query: 448 HIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIAGCDMEEKKDEEDSTMN 501
+ + S Y ++ + R + PT ++ + EE S +N
Sbjct: 602 CLSEFPSNAFYEGALQNGVAAADRLLTHVDFPWPNPTSPMMFWSMTGAEEISASGTSYLN 661
Query: 502 EGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLKN-----MEVSTV 556
EA L+++GV IG++TPY Q + ++ L +EV++V
Sbjct: 662 RAEAAGVEKVVTHLLRAGVDPGRIGVVTPYEGQRAYVSQHMTRAGVLATRLYGEVEVASV 721
Query: 557 DGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLK 616
D FQGREK+ II+S VRSN K +GFL+D RR+NVA+TRAR ++ + + +S
Sbjct: 722 DAFQGREKDFIILSCVRSNEKTGIGFLNDPRRLNVAMTRARSGLVILGNPKVLSRQRLFH 781
Query: 617 RLIEYFEEHAEYLSGS 632
L+ +F + + G+
Sbjct: 782 DLLNHFRDEGCLVEGA 797
>gi|119495335|ref|XP_001264454.1| regulator of nonsense transcripts, putative [Neosartorya fischeri
NRRL 181]
gi|119412616|gb|EAW22557.1| regulator of nonsense transcripts, putative [Neosartorya fischeri
NRRL 181]
Length = 1079
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 234/448 (52%), Gaps = 44/448 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ K++ + + ++ GPPGTGKT T II K G ++L CA SN+AVD
Sbjct: 426 LNGSQINAV-KSVLQRPMSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQ 484
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ ER+ ++ VR+ +R + +ES + SL +R + N +L+K
Sbjct: 485 LCERIHRTGLKTVRVTAKSR---EDVESPVGFL-------SLHEQVR--LNDSNIELIKL 532
Query: 316 KDKNTRREIQKELRTLSKEERKR-QQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+++ EL LS ++ KR +QL A +++ NADV+ T GA +L F
Sbjct: 533 N------QLKAELGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFR 586
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL L
Sbjct: 587 TVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 646
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST---------EPTLLL 481
+ L VQYRMH + + S Y ++ S R P +
Sbjct: 647 GCSPIR--LNVQYRMHPCLSEFPSNMFYEGSLQNGVSAFDRLRRDVDFPWPVVDSPMMFW 704
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKI 540
++ EE S +N EA R ++GV +DIGIITPY Q ++
Sbjct: 705 SNLGN---EEISASGTSYLNRTEATNVEKIVTRFFKAGVQPADIGIITPYEGQRSYIVSS 761
Query: 541 LRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
+++ K + K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRA
Sbjct: 762 MQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 821
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+ ++ + + +S L+++F+E
Sbjct: 822 KYGLVILGNPKVLSKHPLWNCLLQHFKE 849
>gi|70995842|ref|XP_752676.1| regulator of nonsense transcripts [Aspergillus fumigatus Af293]
gi|42820708|emb|CAF32021.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus]
gi|66850311|gb|EAL90638.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus
Af293]
gi|159131430|gb|EDP56543.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus
A1163]
Length = 1079
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 234/448 (52%), Gaps = 44/448 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ K++ + + ++ GPPGTGKT T II K G ++L CA SN+AVD
Sbjct: 426 LNGSQINAV-KSVLQRPMSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQ 484
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ ER+ ++ VR+ +R + +ES + SL +R + N +L+K
Sbjct: 485 LCERIHRTGLKTVRVTAKSR---EDVESPVGFL-------SLHEQVR--LNDSNIELIKL 532
Query: 316 KDKNTRREIQKELRTLSKEERKR-QQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+++ EL LS ++ KR +QL A +++ NADV+ T GA +L F
Sbjct: 533 N------QLKAELGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFR 586
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL L
Sbjct: 587 TVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 646
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST---------EPTLLL 481
+ L VQYRMH + + S Y ++ S R P +
Sbjct: 647 GCSPIR--LNVQYRMHPCLSEFPSNMFYEGSLQNGVSAFDRLRRDVDFPWPVVDSPMMFW 704
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKI 540
++ EE S +N EA R ++GV +DIGIITPY Q ++
Sbjct: 705 SNLGN---EEISASGTSYLNRTEATNVEKIVTRFFKAGVQPADIGIITPYEGQRSYIVSS 761
Query: 541 LRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
+++ K + K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRA
Sbjct: 762 MQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 821
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+ ++ + + +S L+++F+E
Sbjct: 822 KYGLVILGNPKVLSKHPLWNCLLQHFKE 849
>gi|19577367|emb|CAD28448.1| possible regulator of nonsense transcripts [Aspergillus fumigatus]
Length = 1060
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 234/448 (52%), Gaps = 44/448 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ K++ + + ++ GPPGTGKT T II K G ++L CA SN+AVD
Sbjct: 407 LNGSQINAV-KSVLQRPMSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQ 465
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ ER+ ++ VR+ +R + +ES + SL +R + N +L+K
Sbjct: 466 LCERIHRTGLKTVRVTAKSR---EDVESPVGFL-------SLHEQVR--LNDSNIELIKL 513
Query: 316 KDKNTRREIQKELRTLSKEERKR-QQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+++ EL LS ++ KR +QL A +++ NADV+ T GA +L F
Sbjct: 514 N------QLKAELGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFR 567
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL L
Sbjct: 568 TVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 627
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST---------EPTLLL 481
+ L VQYRMH + + S Y ++ S R P +
Sbjct: 628 GCSPIR--LNVQYRMHPCLSEFPSNMFYEGSLQNGVSAFDRLRRDVDFPWPVVDSPMMFW 685
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKI 540
++ EE S +N EA R ++GV +DIGIITPY Q ++
Sbjct: 686 SNLGN---EEISASGTSYLNRTEATNVEKIVTRFFKAGVQPADIGIITPYEGQRSYIVSS 742
Query: 541 LRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
+++ K + K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRA
Sbjct: 743 MQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 802
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+ ++ + + +S L+++F+E
Sbjct: 803 KYGLVILGNPKVLSKHPLWNCLLQHFKE 830
>gi|255082057|ref|XP_002508247.1| predicted protein [Micromonas sp. RCC299]
gi|226523523|gb|ACO69505.1| predicted protein [Micromonas sp. RCC299]
Length = 1188
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 152/439 (34%), Positives = 226/439 (51%), Gaps = 61/439 (13%)
Query: 195 SNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAV 253
++++ SQ DA+ AL + V ++ GPPGTGKT T V ++ ++ R S IL + SNIAV
Sbjct: 651 AHMNKSQTDALEAALFQR-VTLIQGPPGTGKTHTAVALVQMWLRNRTSPILCTSDSNIAV 709
Query: 254 DNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
DN+V+ L VR+ R+G P + +++ +++ S+++ D ++ +A+NG
Sbjct: 710 DNLVDGLSRAGVRVARIGRPEAVRQDLMQFMVESIAGIEPGSNMSKD--QQYQAING--- 764
Query: 314 KTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLV 373
V++ A+VV T GA S L+ SF
Sbjct: 765 --------------------------------VLRRAEVVCATCAGAGSDILERFSFQAC 792
Query: 374 IIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG 432
+IDEA QA E A + L KG S+ +L GD QLPPT+ S EA+ GLG +LFER+ L
Sbjct: 793 LIDEATQATEPATVVPLTKGCSQVVLIGDQKQLPPTIISREADAAGLGTSLFERM--LAR 850
Query: 433 DEVTSMLTVQYRMHEHIMNWSSKQLYNSKI--KAHPSGVKRTSSTEPTLLLIDIAGCDME 490
ML VQYRMH I + SK Y+ + PS + + + + +A D+
Sbjct: 851 GIRAFMLKVQYRMHPAIAAYPSKAFYSGALLSGTPPSARRAPMGFDWPVPAVPLAFVDVP 910
Query: 491 EKKDEED--STMNEGEAEVAMAHAKRLIQS-GVHASDIGIITPYAAQVVLLKIL------ 541
+ + D S N EA+ + K+L V +IGI+TPY+AQV +K L
Sbjct: 911 DGYERSDGSSQTNPVEAQKVVNIVKKLAAGHDVIFGEIGIVTPYSAQVRAIKRLLNGNKP 970
Query: 542 --RSKDDK------LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAV 593
RS+ D L+ +EV +VDGFQGREKE I+ R+N VGFL+D RR+NV +
Sbjct: 971 EVRSRFDAPADPNTLQALEVCSVDGFQGREKEVIVFCCTRANPNGNVGFLADPRRVNVML 1030
Query: 594 TRARRQCCLVCDTETVSSD 612
TRARR ++ + T+ D
Sbjct: 1031 TRARRGLIIIGNLGTLRRD 1049
>gi|212532107|ref|XP_002146210.1| nonsense transcript regulator, putative [Talaromyces marneffei ATCC
18224]
gi|210071574|gb|EEA25663.1| nonsense transcript regulator, putative [Talaromyces marneffei ATCC
18224]
Length = 1093
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 153/456 (33%), Positives = 233/456 (51%), Gaps = 60/456 (13%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ K++ K + ++ GPPGTGKT T II K G ++L CA SN+AVD
Sbjct: 442 LNGSQINAV-KSVLQKPLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQ 500
Query: 256 IVERLVPHRVRLVRLG--------HPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKA 307
+ ER+ ++ VR+ P R L +L QV D S+I E+
Sbjct: 501 LCERIHRTGLKTVRVTAKSREDVESPVRFL------SLHEQVRMND-----SNI--ELNK 547
Query: 308 LNGKLLKTKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSR 363
LN +++ EL LS ++E+K +QL A +++ NADV+ T GA
Sbjct: 548 LN-------------QLKSELGELSSQDEKKFKQLTRAAEREILTNADVICCTCVGAGDP 594
Query: 364 KLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRT 422
+L F V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++
Sbjct: 595 RLAKFKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQS 654
Query: 423 LFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR---------TS 473
LFERL L + L VQYRMH + + S Y ++ S +R
Sbjct: 655 LFERLVILGCSPIR--LNVQYRMHPCLSEFPSNMFYEGSLQNGVSMAQRLRRDVDFPWPV 712
Query: 474 STEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAA 533
+ P + ++ EE S +N EA R ++GV S IGIITPY
Sbjct: 713 AENPMMFWSNLGN---EEISASGTSYLNRTEAANVEKIVTRFFKAGVQPSGIGIITPYEG 769
Query: 534 Q-VVLLKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
Q ++ +++ K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR
Sbjct: 770 QRSYVVSSMQATGTFKKEHYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRR 829
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+NVA+TRA+ ++ + + +S L+ +F+E
Sbjct: 830 LNVALTRAKYGVVILGNPKVLSKHPLWNYLLLHFKE 865
>gi|302829609|ref|XP_002946371.1| hypothetical protein VOLCADRAFT_86581 [Volvox carteri f.
nagariensis]
gi|300268117|gb|EFJ52298.1| hypothetical protein VOLCADRAFT_86581 [Volvox carteri f.
nagariensis]
Length = 1135
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 170/574 (29%), Positives = 269/574 (46%), Gaps = 70/574 (12%)
Query: 108 ALGQGVVYRLKDSSITVAF-DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNG 166
ALG + Y+ + F +D+PE+ ++ + +Y RM++AL K
Sbjct: 426 ALGHVLTYQQSEEVCLELFANDVPED-CTVGYSVDFVWRGTSYDRMRNALNTFRK-YSAS 483
Query: 167 PAAGLIPVLFGEQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPP 221
+ L ++ G +V L K P L+HSQ A+ K++ + + ++ GPP
Sbjct: 484 ISGYLYHLILGHPVESVTLKIPLPKAGFAVPTLPELNHSQLHAV-KSVLHQPLSLIQGPP 542
Query: 222 GTGKTTTVVEIILQEVKRGS-KILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQV 280
GTGKT T I+ G+ ++L A SN+AVD + ++ +++VRL R +
Sbjct: 543 GTGKTVTSAAIVYHLAHSGTGQVLVAAPSNVAVDQLAHKMDQTGLKVVRLCAKTR---EA 599
Query: 281 LESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQ 340
+ S ++ L + +A + ++ L L+ +KEL++L R+R +
Sbjct: 600 VASPVEHLTLHYQVTHMAVPEGERLRKLLA--LRGAQGGLNASDEKELKSL----RRRLE 653
Query: 341 LAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIAC-------------- 386
+ +V++NADVV TT GA +L N F V+IDE+ QA E C
Sbjct: 654 M---EVLENADVVCTTCVGAGDPRLANFRFQHVLIDESTQAAEPECLIPMVLGAKQLPHA 710
Query: 387 --WIALLKGS-------------RCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
W+ LL S + IL GDH QL P + +A + GL ++LFERL L
Sbjct: 711 AQWVFLLLASPHVHRWRTSMLTAKVILVGDHCQLGPVIMCKKAAEAGLCQSLFERLRLLG 770
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS-GVKRTSSTE--------PTLLLI 482
+ L VQYRMH + + S Y ++ G +R + P + +
Sbjct: 771 VKPIR--LQVQYRMHPCLSEFPSNTFYEGTLQNGTGMGERRLVGVDFPWHNPDKPMMFWV 828
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-----VVL 537
+ EE S +N EA R +Q+G+ S IG+ITPY Q V+
Sbjct: 829 QLGA---EEISASGTSYLNRTEAAAVEKVVTRFLQNGMSPSQIGVITPYEGQRAHVVSVM 885
Query: 538 LKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
++ + D K +EVS+VD FQGREK+ I++S VRSN +GFLSD RR+NVA+TRAR
Sbjct: 886 VRNGAVRQDLYKEIEVSSVDAFQGREKDIIVLSCVRSNEHSSIGFLSDPRRLNVALTRAR 945
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
++ + +S L++YF+E + G
Sbjct: 946 YGLVVLGNPRVLSRQPLWNSLLQYFKESGCLVEG 979
>gi|402085799|gb|EJT80697.1| regulator-nonsense transcripts 1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1097
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 153/449 (34%), Positives = 236/449 (52%), Gaps = 46/449 (10%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ AI KA+ S + ++ GPPGTGKT T II K S++L CA SN+AVD
Sbjct: 453 LNGSQISAI-KAVLSTPLSLIQGPPGTGKTVTSATIIYHLAKMNNSQVLVCAPSNVAVDQ 511
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ ER+ +++VRL +R + +ES++ S LA + M N +L K
Sbjct: 512 LCERVHRTGLKVVRLTAKSR---EDVESSV---------SFLALHEQVRMNDTNPELAKL 559
Query: 316 KDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+ +++ EL LS ++E+K +QL A +++ NADVV T GA +L F
Sbjct: 560 Q------QLKSELGELSSQDEKKFKQLTKAAEREILGNADVVCCTCVGAGDPRLAKMKFR 613
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL L
Sbjct: 614 NVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKL 673
Query: 431 YGDEVTSM-LTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR---------TSSTEPTLL 480
+T + L VQYRMH + + S Y ++ + +R P +
Sbjct: 674 ---NLTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTIQQRLRRDVDFPWPVGDMPMMF 730
Query: 481 LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLK 539
++ EE S +N EA R ++GV DIG+ITPY Q ++
Sbjct: 731 WSNLGN---EEISASGTSYLNRTEASNVEKIVTRFFKAGVKPGDIGVITPYEGQRSYIVS 787
Query: 540 ILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
+++ K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+NVA+TR
Sbjct: 788 TMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVALTR 847
Query: 596 ARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
A+ ++ + + +S L+ +F +
Sbjct: 848 AKYGVVIIGNPKVLSKHELWHHLLVHFRD 876
>gi|342320526|gb|EGU12466.1| ATP dependent helicase [Rhodotorula glutinis ATCC 204091]
Length = 1086
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 154/463 (33%), Positives = 240/463 (51%), Gaps = 39/463 (8%)
Query: 181 PTVLKKDIAFK---PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV 237
P VL+ + + P +L+HSQ A+ K++ K + ++ GPPGTGKT T I+
Sbjct: 445 PQVLRAQMPKRVSAPNLPDLNHSQIYAV-KSVLQKPLSLIQGPPGTGKTVTSASIVYHLS 503
Query: 238 KRG-SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSS 296
K ++L A SN+AVD + E++ +++VR+ +R + LES++ L ++
Sbjct: 504 KMNPGQVLVAAPSNVAVDQLTEKIHQTGLKVVRVTAKSR---EALESSVSFLTLHAQVAN 560
Query: 297 LASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVV 353
SD E+ KL++ K + Q EL S +ERK + L +++ NADV+
Sbjct: 561 --SDTHPELS----KLIQLKQE------QGELS--SSDERKFKALTRMVEKEILTNADVI 606
Query: 354 LTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSV 412
T G +L N F V+IDEA QA E C I L G + ++ GDH QL PT+ +
Sbjct: 607 CATCVGCGDPRLKNLKFRTVLIDEATQATEPECMIPLTFGVKQLVMVGDHSQLGPTIMNK 666
Query: 413 EAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT 472
+A + GL ++LFERL L G+ L VQYRMH + + S Y ++ + +R
Sbjct: 667 KAARAGLNQSLFERLI-LLGNRPIR-LQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERL 724
Query: 473 SST------EPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIG 526
+PT + EE S +N EA R ++GV S IG
Sbjct: 725 RKNVDFPWPQPTTPMYFHQNLGQEEISSSGTSFLNRTEASNVEKIVTRFFKAGVMPSQIG 784
Query: 527 IITPYAAQ----VVLLKILRS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVG 581
IITPY Q V +++ S K + K +EV++VD FQGREK+ +I+S VRSN + +G
Sbjct: 785 IITPYEGQRSYLVSYMQMNGSLKKELYKEIEVASVDAFQGREKDYVIMSCVRSNEHQGIG 844
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
FL+D RR+NVA+TRA+ ++ + + +S L+ +++E
Sbjct: 845 FLNDPRRLNVALTRAKYGLVILGNPKVLSKHALWHYLLTHYKE 887
>gi|259489087|tpe|CBF89067.1| TPA: hypothetical protein similar to possible regulator of nonsense
transcripts (Broad) [Aspergillus nidulans FGSC A4]
Length = 1077
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 150/455 (32%), Positives = 235/455 (51%), Gaps = 44/455 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ K++ + + ++ GPPGTGKT T II K G ++L CA SN+AVD
Sbjct: 424 LNGSQINAV-KSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKLNGGQVLVCAPSNVAVDQ 482
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ ER+ ++ VR+ +R + +ES + SL +R + N +L+K
Sbjct: 483 LCERIHRTGLKTVRVTAKSR---EDVESPVGFL-------SLHEQVR--LNDSNIELIKL 530
Query: 316 KDKNTRREIQKELRTLSKEERKR-QQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+++ EL LS ++ KR +QL A +++ NADV+ T GA +L F
Sbjct: 531 N------QLKSELGELSSQDEKRLKQLTRAAEREILNNADVICCTCVGAGDPRLAKLKFR 584
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL L
Sbjct: 585 TVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 644
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST---------EPTLLL 481
+ L VQYRMH + + S Y ++ + R P +
Sbjct: 645 GCSPIR--LNVQYRMHPCLSEFPSNMFYEGSLQNGITSFDRLRREVDFPWPILDSPMMFW 702
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKI 540
++ EE S +N EA R ++GV DIGIITPY Q ++
Sbjct: 703 SNLGN---EEISASGTSYLNRTEAANVEKIVTRFFKAGVQPKDIGIITPYEGQRSYIVSS 759
Query: 541 LRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
+++ K + K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRA
Sbjct: 760 MQATGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 819
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+ ++ + + +S L+++F+E + G
Sbjct: 820 KYGLVILGNPKVLSKHPLWNCLLQHFKERHTLVEG 854
>gi|302689419|ref|XP_003034389.1| hypothetical protein SCHCODRAFT_52671 [Schizophyllum commune H4-8]
gi|300108084|gb|EFI99486.1| hypothetical protein SCHCODRAFT_52671 [Schizophyllum commune H4-8]
Length = 1958
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 205/715 (28%), Positives = 324/715 (45%), Gaps = 134/715 (18%)
Query: 1 MEGRKTKEKQSAVSLQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTIL--N 58
EGR + Q + V +PL+ E A++ Q K ++ N
Sbjct: 1119 FEGRLQPVPDRFDNFQHYDRVFSPLLLFECWAQLQ--------------QSKNDVMVTEN 1164
Query: 59 LKCVDAQTGLMGKTL-LEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRL 117
L C + + + LE T+ + + D+V+L+ K D P L +
Sbjct: 1165 LPCTISSRAYTDRWIDLEVTITRAEDMREFYLAETDIVLLR--KVDTRQPLLAK------ 1216
Query: 118 KDSSITVAFDDI------------PEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQN 165
SS+T A + I PE G + + K+ + T R AL+Q+ +
Sbjct: 1217 VQSSVTPASNMIATLRCSGAAGVKPENG--TAWEMSKVMSLSTIHREYTALVQVP--YYD 1272
Query: 166 GPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGK 225
P L P L + P++ ++ +++ Q AI+K++ +K ++ GPPGTGK
Sbjct: 1273 LPGNILRPNL--DNSPSISASEVQRMQEKYSVNEPQAVAITKSIHTKGFSLIQGPPGTGK 1330
Query: 226 TTTVVEII---LQEVKR-----------GSKILACAASNIAVDNIVERL------VPHRV 265
T+T+ ++ L E R +IL CA SN A+D + RL V ++
Sbjct: 1331 TSTICGLVSAYLYEANRRITRPMENDPNQPRILLCAPSNAAIDEVAFRLKCSPAAVAGKL 1390
Query: 266 RLVRLGHPARLLPQVLESALD--------------------------------------- 286
+VR+G + V + LD
Sbjct: 1391 NVVRIGAEKAIGDAVKDITLDTLADKKLNVSTTNTENVEGELSSLFRELNAAKHEINAKQ 1450
Query: 287 ---AQVLRGDNSSLASDIRKEMKALNGKLLK-TKDKNTRREIQK-ELRTLSKEERKRQQL 341
AQ++ DNS+ A + E++ L + + +K + +E+QK RT+ RK
Sbjct: 1451 KELAQIV--DNSARAQTLSDELRMLKSRRHQVSKQVDQMKEVQKNNRRTMDASRRK---- 1504
Query: 342 AVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIAL-LKGSRCILAG 400
A DV++ A VV +TL+GA L+ + F ++IIDEAAQA+E++ I S C+L G
Sbjct: 1505 ARRDVLEEAHVVCSTLSGAGHESLNESEFQMIIIDEAAQAIELSSLIPFKFSCSHCVLVG 1564
Query: 401 DHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNS 460
D QLPPTV S++A K ++LF RL + V ++L++QYRMH I SK Y+S
Sbjct: 1565 DEKQLPPTVISMQATKFRYNQSLFVRLQRQSPNAV-NLLSIQYRMHPSISALPSKVFYDS 1623
Query: 461 KIKAHP---SGVKRTSSTEPTL----LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAK 513
++K P + K+ +P G E + S+ N E EVA+A
Sbjct: 1624 RLKDGPDMEAKTKQPWQFDPKFGAYRFFNVFRGV---EDRAGAKSSKNIAECEVAVALYS 1680
Query: 514 RLI----QSGVHASDIGIITPYAAQVVLLKIL---RSKDDKLKNMEVSTVDGFQGREKEA 566
RL+ SG A+ +GII Y Q+V L+ R D K + +TVDGFQG+EK+
Sbjct: 1681 RLVTQFGSSGDFAAKVGIIAGYKGQIVELRRRFENRFGRDITKKIAFNTVDGFQGQEKDV 1740
Query: 567 IIISMVRSNS-KKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS-SDGFLKRLI 619
II S VR+ + +GF+SD RRMNVA+TRA+ ++ +T+S SD K+++
Sbjct: 1741 IIFSCVRAGTGTTNIGFMSDTRRMNVALTRAKSSLFILGHADTLSRSDETWKQIV 1795
>gi|430813983|emb|CCJ28727.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1045
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 163/513 (31%), Positives = 260/513 (50%), Gaps = 53/513 (10%)
Query: 138 LRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI--PVLFGEQKPTVLKKDIAFKPFNS 195
++ + ++ RM+ AL QL+ + +G I +L + P VLK + K F+S
Sbjct: 384 FSIDYVWKSTSFDRMQTALKQLA--INEASVSGYIYHKLLGHDIAPLVLKTQMP-KRFSS 440
Query: 196 ----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASN 250
L+ SQ A+ L K + ++ GPPGTGKT T I+ K S ++L CA SN
Sbjct: 441 PGLPELNVSQVYAVRSVLQ-KPLSLIQGPPGTGKTVTSATIVYHLAKMNSGQVLVCAPSN 499
Query: 251 IAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG 310
+AVD + +++ +++VR+ +R + LES + + L + +D E++
Sbjct: 500 VAVDQLCKKIHQTGLKVVRVSAKSR---EDLESPVASLTLHEQVRN--NDTNTELQ---- 550
Query: 311 KLLKTKDKNTRREIQKELRTLSKEERKRQQLAVT----DVIKNADVVLTTLTGAVSRKLD 366
KL++ +D EL LS ++ K+ + V +++ NADV+ T G +L
Sbjct: 551 KLIQLRD---------ELGELSSQDEKKYKALVKMCEKEILSNADVICATCVGCGDPRLS 601
Query: 367 NTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFE 425
F V+IDEA QA E C I L+ G + +L GDH QL P + + +A K GL ++LFE
Sbjct: 602 KFKFRTVLIDEATQATEPECMIPLVMGCKQVVLVGDHQQLGPVIMNKKAAKAGLQQSLFE 661
Query: 426 RLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS---------STE 476
RL L + LTVQYRMH + + S Y ++ S +R +
Sbjct: 662 RLVVLGISPIR--LTVQYRMHPCLSEFPSNMFYEGTLQNGVSKNERLRKNVDFPWPVNDT 719
Query: 477 PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-- 534
P + + + EE S +N EA + ++GV S IGIITPY Q
Sbjct: 720 PMMFHMSLG---QEEISSSGTSYLNRTEASNCEKIVVKFFKAGVKFSQIGIITPYEGQRS 776
Query: 535 VVLLKILRS---KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNV 591
++ + +S + D K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NV
Sbjct: 777 YIVSSMQQSGSLRKDLYKEIEVASVDAFQGREKDYIIVSCVRSNEHQGIGFLSDPRRLNV 836
Query: 592 AVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
A+TRA+ ++ + + +S L+ +++E
Sbjct: 837 ALTRAKYGVVILGNPKVLSKHPLWYHLLLHYKE 869
>gi|299746272|ref|XP_001837862.2| DNA helicase [Coprinopsis cinerea okayama7#130]
gi|298406979|gb|EAU83962.2| DNA helicase [Coprinopsis cinerea okayama7#130]
Length = 822
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 151/480 (31%), Positives = 237/480 (49%), Gaps = 79/480 (16%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
L+ F++ L+ E++AEI S ++ ++KG + L GL GKTL+
Sbjct: 8 LKAFITRQKQLLQSERDAEIERSSLLLSNCGPKLLEQKGLALNGLGVASINIGLGGKTLV 67
Query: 75 EFQSTKG----DVLPAHKFGTHDVVVLK-----------PNK----ADLGSPALG----- 110
E + + P H F D+ ++ P K A S + G
Sbjct: 68 ELERPTAYHTSPIFPPHTFRNGDLARIEAHVASSSSNGPPKKTKKTATSSSASTGDVTSN 127
Query: 111 --QGVVYRLKDSSITVAFD--DIPEEGLNSP--LRLEKLANEVTYRRMKDALIQLSK--- 161
+GVVY++ D+ I +A D + + GL+ P R+ KLAN VTY RM A+ +L +
Sbjct: 128 SAEGVVYKVSDTRIVIAIDPANTSDSGLDLPERCRVVKLANSVTYDRMDKAIERLERTVL 187
Query: 162 ----GVQNGPAAGLIPVL-----FGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSK 212
G P L P++ P + + F F+ NL+ SQK+A+ L++
Sbjct: 188 PSADGKPPPPDYVLTPLMQVLMCMKPLGPPAQRGGVEF--FDPNLNDSQKEAVRFCLAAP 245
Query: 213 NVFMLHGPPGTGKTTTVVEIILQEVK------RGSKILACAASNIAVDNIVERLV----- 261
+ PPGTGKT T++E+I Q K G ++L C ASN++VDNI+ERL+
Sbjct: 246 EIANRLIPPGTGKTHTLIELIRQLTKPTPTHPNGRRLLVCGASNLSVDNILERLLDLPST 305
Query: 262 --PHRVRLVRLGHPARLLPQ--VLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKD 317
+++ R+GHPAR++ +L+S LDA+ R D ++L DI++E++ L
Sbjct: 306 SSSKPLKVTRIGHPARVMAHEGILDSTLDAKSTRTDQAALVKDIKQELEGYLNVLTGKGG 365
Query: 318 KNT--------------------RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTL 357
R+++ +E++ L KE R+R+ V V+ + VVL T
Sbjct: 366 GKAAKGTAAAANASKGGRPRGAERKKMWEEVKALRKEFRQRESTIVHSVLAESQVVLATC 425
Query: 358 TGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKK 417
A R++ N FD+VIIDEA QA+E CW+ + K + ILAGD +QLPPTV S++ E+K
Sbjct: 426 HSAGGRQMRNEEFDVVIIDEATQAMEAVCWVPIFKAKKLILAGDPMQLPPTVLSLDEERK 485
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/236 (44%), Positives = 142/236 (60%), Gaps = 32/236 (13%)
Query: 422 TLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSG--------VKRTS 473
TLFERL +YG +V MLTVQYRMH+ I ++ S LY SK+ +H S V TS
Sbjct: 583 TLFERLEKMYGRKVKRMLTVQYRMHKQICDFPSTTLYRSKLISHDSVKEHLLKDLVTSTS 642
Query: 474 STEPTLL-----LIDIAGCDMEEKKD---------------EEDSTMNEGEAEVAMAHAK 513
E +L D +GC+ E+ D EE S NE EA V + +
Sbjct: 643 EDEEEVLQHPVVFFDTSGCEYFERLDTGGEDINLKGKAAKVEEGSRCNENEASVVRSWVE 702
Query: 514 RLIQSGVHASDIGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMV 572
+L+++GV + IITPY AQV LL +LR ++E+ TVDG QGREKEA++IS+V
Sbjct: 703 KLVENGVEPGQMAIITPYQAQVTLLTSMLRPVYGP--SLEIGTVDGMQGREKEAVVISLV 760
Query: 573 RSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE 627
RSN K+EVGFL ++RRMNVA+TRARR C+V D+ TV+ G +LK+ + + E +A+
Sbjct: 761 RSNDKREVGFLKEKRRMNVAMTRARRHLCVVGDSSTVTHGGKYLKKWVAWLEANAD 816
>gi|406864055|gb|EKD17101.1| RNA helicase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1098
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 145/432 (33%), Positives = 233/432 (53%), Gaps = 40/432 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L++SQ +A+ K++ K + ++ GPPGTGKT T +I K G ++L CA SN+AVD
Sbjct: 452 LNNSQINAV-KSVLQKPLSLIQGPPGTGKTVTSATVIYHLAKVNGGQVLVCAPSNVAVDQ 510
Query: 256 IVERLVPHRVRLVRLGHPAR--LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
+ ER+ +++VRL +R + V +L QV R ++S+L ++K+ G+L
Sbjct: 511 LCERIHRTGLKVVRLTAKSREDVQSSVGFLSLHEQV-RMNDSNLELTKLSQLKSELGEL- 568
Query: 314 KTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLV 373
++D +K+ +TL++ + +++ NADV+ T GA +L F V
Sbjct: 569 SSQD-------EKKFKTLTRGAER-------EILTNADVICCTCVGAGDPRLAKMKFRTV 614
Query: 374 IIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG 432
+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL L
Sbjct: 615 LIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVQLGQ 674
Query: 433 DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS---------STEPTLLLID 483
+ + L VQYRMH + + S Y ++ + V+R S P + +
Sbjct: 675 NPIR--LDVQYRMHPCLSEFPSNMFYEGSLQNGVTMVQRIRCDVDFPWPVSDTPMMFWSN 732
Query: 484 IAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ--VVLLKIL 541
+ EE S +N EA R ++GV +DIG+ITPY Q V+ +
Sbjct: 733 LGN---EEISASGTSYLNRTEASNVEKIVTRFFKAGVQPADIGVITPYEGQRSYVVSSMQ 789
Query: 542 RS---KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARR 598
+ K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+NVA+TRA+
Sbjct: 790 NTGTFKKENYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKY 849
Query: 599 QCCLVCDTETVS 610
++ + + +S
Sbjct: 850 GLVILGNPKVLS 861
>gi|428177002|gb|EKX45884.1| hypothetical protein GUITHDRAFT_159666 [Guillardia theta CCMP2712]
Length = 1030
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 161/530 (30%), Positives = 262/530 (49%), Gaps = 55/530 (10%)
Query: 133 GLNSPLR------LEKLANEVTYRRMKDALIQLSKGVQNGPAAG-LIPVLFG---EQKPT 182
G N+P+ +E + TY RM+ A+ + V +G L L G E +P
Sbjct: 394 GNNAPIEATHGFSVEFVWKSTTYDRMQSAMRTFA--VDETSVSGYLYHRLLGHDVEPQPI 451
Query: 183 VLKKDIAFK-PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG- 240
F P L+HSQ A+ K++ + + ++ GPPGTGKT T I+ + G
Sbjct: 452 RCSLPNRFSAPGLPELNHSQVFAV-KSVLQQPLSVIQGPPGTGKTVTSACIVYHLSRMGH 510
Query: 241 SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
++L A SN+AVD++ E++ +++VR+ +R + + S+++ L L +
Sbjct: 511 GQVLVTAPSNVAVDHLTEKIHKTGLKVVRMCAKSR---EAIGSSVEQLTLHYQVQHLDTS 567
Query: 301 IRKEMKALNGKLLKTKDKNTRREIQKELRTLS-KEERKRQQLAVT---DVIKNADVVLTT 356
+ E + L ++++KEL LS ++E+K +QL +++ ADV+ TT
Sbjct: 568 DKAEFRKL-------------QQLKKELGELSTQDEKKYKQLKRATERELLMAADVICTT 614
Query: 357 LTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAE 415
GA +L+ F V++DE QA E C I + G++ +L GDH QL P V +A
Sbjct: 615 CVGAGDARLNGFRFTKVLVDECTQATEPECLIPIAMGAKQLVLVGDHCQLGPVVMCKKAA 674
Query: 416 KKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK---------AHP 466
K GL ++LFER+ +L V L VQYRMH + + S Y ++ AH
Sbjct: 675 KAGLQQSLFERMVNLGVKPVR--LQVQYRMHPILSEFPSNTFYEGTLQNGVTHAERHAHA 732
Query: 467 SGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIG 526
+++P + I EE S +N EA R ++ GV IG
Sbjct: 733 IDFPWPVASKPMMFYISTGA---EELSASGTSYLNRTEASNVEKIVTRFLKGGVVPEQIG 789
Query: 527 IITPYAAQVVLLKILRSKDDKLK-----NMEVSTVDGFQGREKEAIIISMVRSNSKKEVG 581
IITPY Q + S++ L+ +EV++VD FQGREK+ II+S VRSN K +G
Sbjct: 790 IITPYEGQRAYIVQYMSRNGSLRKQLYNELEVASVDAFQGREKDFIILSCVRSNEGKSIG 849
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
F+++ RR+NVA+TRAR ++ + + ++ L+ +F++H + G
Sbjct: 850 FVNNPRRLNVALTRARYGVVILGNPKVLAKQPLWNNLLCHFKQHECLVEG 899
>gi|67516729|ref|XP_658250.1| hypothetical protein AN0646.2 [Aspergillus nidulans FGSC A4]
gi|40745995|gb|EAA65151.1| hypothetical protein AN0646.2 [Aspergillus nidulans FGSC A4]
Length = 1062
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 150/455 (32%), Positives = 235/455 (51%), Gaps = 44/455 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ K++ + + ++ GPPGTGKT T II K G ++L CA SN+AVD
Sbjct: 409 LNGSQINAV-KSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKLNGGQVLVCAPSNVAVDQ 467
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ ER+ ++ VR+ +R + +ES + SL +R + N +L+K
Sbjct: 468 LCERIHRTGLKTVRVTAKSR---EDVESPVGFL-------SLHEQVR--LNDSNIELIKL 515
Query: 316 KDKNTRREIQKELRTLSKEERKR-QQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+++ EL LS ++ KR +QL A +++ NADV+ T GA +L F
Sbjct: 516 N------QLKSELGELSSQDEKRLKQLTRAAEREILNNADVICCTCVGAGDPRLAKLKFR 569
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL L
Sbjct: 570 TVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 629
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST---------EPTLLL 481
+ L VQYRMH + + S Y ++ + R P +
Sbjct: 630 GCSPIR--LNVQYRMHPCLSEFPSNMFYEGSLQNGITSFDRLRREVDFPWPILDSPMMFW 687
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKI 540
++ EE S +N EA R ++GV DIGIITPY Q ++
Sbjct: 688 SNLGN---EEISASGTSYLNRTEAANVEKIVTRFFKAGVQPKDIGIITPYEGQRSYIVSS 744
Query: 541 LRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
+++ K + K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRA
Sbjct: 745 MQATGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 804
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+ ++ + + +S L+++F+E + G
Sbjct: 805 KYGLVILGNPKVLSKHPLWNCLLQHFKERHTLVEG 839
>gi|85101908|ref|XP_961233.1| ATP-dependent helicase NAM7 [Neurospora crassa OR74A]
gi|18202963|sp|Q9HEH1.1|RENT1_NEUCR RecName: Full=Regulator of nonsense transcripts 1 homolog
gi|11595520|emb|CAC18314.1| probable nonsense-mediated mRNA decay protein [Neurospora crassa]
gi|28922775|gb|EAA31997.1| ATP-dependent helicase NAM7 [Neurospora crassa OR74A]
Length = 1093
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 231/446 (51%), Gaps = 40/446 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ AI + LS+ + ++ GPPGTGKT T II K S++L CA SN+AVD
Sbjct: 456 LNASQIAAIKQVLSNP-LSLIQGPPGTGKTVTSATIIYHLAKMSNSQVLVCAPSNVAVDQ 514
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKL--- 312
+ ER+ +++VRL +R + +ES++ S LA + M N +L
Sbjct: 515 LCERIHRTGLKVVRLTAKSR---EDVESSV---------SFLALHEQVRMNTTNKELDGL 562
Query: 313 --LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
LKT+ + +K + L+++ + ++++NADVV T GA +L F
Sbjct: 563 VKLKTETGELSSQDEKRFKQLTRQAER-------EILQNADVVCCTCVGAGDPRLSKMKF 615
Query: 371 DLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL
Sbjct: 616 RNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVK 675
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT------SSTEPTLLLID 483
L + L VQYRMH + + S Y ++ + +R P ++
Sbjct: 676 LQFTPIR--LKVQYRMHPCLSEFPSNMFYEGSLQNGVTAAERLRKDVDFPWPVPETPMMF 733
Query: 484 IAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILR 542
+ EE S +N EA R ++GV +DIG+ITPY Q ++ ++
Sbjct: 734 WSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPADIGVITPYEGQRSYIVNTMQ 793
Query: 543 S----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARR 598
+ K + + +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+NVA+TRA+
Sbjct: 794 NTGTFKKESYREVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVALTRAKY 853
Query: 599 QCCLVCDTETVSSDGFLKRLIEYFEE 624
++ + + + L+ +F++
Sbjct: 854 GLVIIGNPKVLCKHELWHHLLVHFKD 879
>gi|452987990|gb|EME87745.1| hypothetical protein MYCFIDRAFT_148374 [Pseudocercospora fijiensis
CIRAD86]
Length = 1091
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 146/445 (32%), Positives = 233/445 (52%), Gaps = 36/445 (8%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVD 254
+L+ SQ +A+ K++ K + ++ GPPGTGKT T II K G ++L CA SN+AVD
Sbjct: 451 DLNGSQINAV-KSVLQKPLSLIQGPPGTGKTVTSATIIYHLSKMNGGQVLVCAPSNVAVD 509
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
+ ER+ +++VR+ +R + ES + L S +D E+ L K LK
Sbjct: 510 QLCERIHITGLKVVRVTAKSR---EDAESNVGFLSLHRQVS--MNDTNVELSKL--KQLK 562
Query: 315 TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVI 374
+ + +K+ + L++ + ++++NADV+ T GA +L F V+
Sbjct: 563 DEQGELSSQDEKKFKALTRAAER-------EILQNADVICCTCVGAGDPRLAKFKFRTVL 615
Query: 375 IDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGD 433
IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL L
Sbjct: 616 IDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVVLGCA 675
Query: 434 EVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR---------TSSTEPTLLLIDI 484
+ L VQYRMH + + S Y ++ + +R + P + ++
Sbjct: 676 PIR--LQVQYRMHPCLSEFPSNMFYEGSLQNGITMQQRLRKDVDFPWPVADSPMMFWSNL 733
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ--VVLLKILR 542
EE S +N EA+ R ++GV S IGIITPY Q V+ + +
Sbjct: 734 GN---EEISASGTSYLNRTEAQNVEKIVTRFFKAGVSPSAIGIITPYEGQRSYVVQSMQQ 790
Query: 543 S---KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 599
+ K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+NVA+TRA+
Sbjct: 791 TGTFKKEHYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYG 850
Query: 600 CCLVCDTETVSSDGFLKRLIEYFEE 624
C ++ + + +S L+ +F+E
Sbjct: 851 CVILGNPKVLSKHPLWHYLLLHFKE 875
>gi|328353104|emb|CCA39502.1| Regulator of nonsense transcripts 1 [Komagataella pastoris CBS
7435]
Length = 967
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 166/544 (30%), Positives = 268/544 (49%), Gaps = 54/544 (9%)
Query: 111 QGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAG 170
+G L+ SS+ P N R E + ++++RM+ AL ++ + +
Sbjct: 320 EGFTLELQPSSVK------PPTEHNVGFRAEIVWKGISFQRMQAALTTFAE--KKSISKD 371
Query: 171 LIPVLFG--EQKPTV---LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGK 225
L +L G E++P L + I+ F + L+ SQ +A+ L + + ++ GPPGTGK
Sbjct: 372 LYDILLGHKEEQPEFTAKLPEAISVPNF-TQLNPSQVNAVKSVLQQR-LSLIQGPPGTGK 429
Query: 226 TTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESA 284
T T I+ K + K+L A+SNIAVD++ +L +++VR+ +R + +ESA
Sbjct: 430 TVTSATIVYHLAKSKKKKVLVTASSNIAVDHLASKLEDIGLKVVRVTARSR---ENVESA 486
Query: 285 LDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERK----RQQ 340
+D L SSL S+ + + + EL +LSK++ + +
Sbjct: 487 IDHLSL----SSLVSNTNNPVLK------------KLLKKKDELGSLSKKDMNIYISQTK 530
Query: 341 LAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILA 399
A +++ A VV T +GA ++L N F V+IDE+ Q E I ++KG++ IL
Sbjct: 531 KAEAEILAEAHVVCCTCSGAGDKRLANIKFPYVLIDESTQPSEPESLIPIVKGAKQVILV 590
Query: 400 GDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYN 459
GDH QL P + A K GL ++LFERL L + L VQYRMH + + S Y+
Sbjct: 591 GDHQQLGPVILHNGAAKAGLRQSLFERLIKL--GHIPIRLEVQYRMHPSLSEFPSNMFYD 648
Query: 460 SKIK---AHPSGVKRTSS---TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAK 513
++ +H + R SS P + L+ + EE S +N EA
Sbjct: 649 GSLQNGVSHEQRLIRRSSFPWPAPGIPLLFWSSYGTEEISISGTSFLNRSEAMNCEKIIS 708
Query: 514 RLIQSGVHASDIGIITPYAAQ------VVLLKILRSKDDKLKNMEVSTVDGFQGREKEAI 567
RL+ G+ IG+ITPY Q +L+ + +++EV++VD FQGREK+ I
Sbjct: 709 RLLSEGIKPHQIGVITPYQGQRDYIVQYLLMNGAHPDREIYQDVEVASVDAFQGREKDFI 768
Query: 568 IISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAE 627
I S RSN +GFL D RR+NVA+TRA+ ++ + +T+ D RL+ +F +
Sbjct: 769 IFSCTRSNHTNTIGFLKDARRLNVAITRAKYGLFVLGNIKTLQKDPLWNRLLVHFRDKGA 828
Query: 628 YLSG 631
+ G
Sbjct: 829 LVEG 832
>gi|254571547|ref|XP_002492883.1| ATP-dependent RNA helicase of the SFI superfamily, required for
nonsense mediated mRNA decay and for [Komagataella
pastoris GS115]
gi|238032681|emb|CAY70704.1| ATP-dependent RNA helicase of the SFI superfamily, required for
nonsense mediated mRNA decay and for [Komagataella
pastoris GS115]
Length = 941
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 166/544 (30%), Positives = 268/544 (49%), Gaps = 54/544 (9%)
Query: 111 QGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAG 170
+G L+ SS+ P N R E + ++++RM+ AL ++ + +
Sbjct: 294 EGFTLELQPSSVK------PPTEHNVGFRAEIVWKGISFQRMQAALTTFAE--KKSISKD 345
Query: 171 LIPVLFG--EQKPTV---LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGK 225
L +L G E++P L + I+ F + L+ SQ +A+ L + + ++ GPPGTGK
Sbjct: 346 LYDILLGHKEEQPEFTAKLPEAISVPNF-TQLNPSQVNAVKSVLQQR-LSLIQGPPGTGK 403
Query: 226 TTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESA 284
T T I+ K + K+L A+SNIAVD++ +L +++VR+ +R + +ESA
Sbjct: 404 TVTSATIVYHLAKSKKKKVLVTASSNIAVDHLASKLEDIGLKVVRVTARSR---ENVESA 460
Query: 285 LDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERK----RQQ 340
+D L SSL S+ + + + EL +LSK++ + +
Sbjct: 461 IDHLSL----SSLVSNTNNPVLK------------KLLKKKDELGSLSKKDMNIYISQTK 504
Query: 341 LAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILA 399
A +++ A VV T +GA ++L N F V+IDE+ Q E I ++KG++ IL
Sbjct: 505 KAEAEILAEAHVVCCTCSGAGDKRLANIKFPYVLIDESTQPSEPESLIPIVKGAKQVILV 564
Query: 400 GDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYN 459
GDH QL P + A K GL ++LFERL L + L VQYRMH + + S Y+
Sbjct: 565 GDHQQLGPVILHNGAAKAGLRQSLFERLIKL--GHIPIRLEVQYRMHPSLSEFPSNMFYD 622
Query: 460 SKIK---AHPSGVKRTSS---TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAK 513
++ +H + R SS P + L+ + EE S +N EA
Sbjct: 623 GSLQNGVSHEQRLIRRSSFPWPAPGIPLLFWSSYGTEEISISGTSFLNRSEAMNCEKIIS 682
Query: 514 RLIQSGVHASDIGIITPYAAQ------VVLLKILRSKDDKLKNMEVSTVDGFQGREKEAI 567
RL+ G+ IG+ITPY Q +L+ + +++EV++VD FQGREK+ I
Sbjct: 683 RLLSEGIKPHQIGVITPYQGQRDYIVQYLLMNGAHPDREIYQDVEVASVDAFQGREKDFI 742
Query: 568 IISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAE 627
I S RSN +GFL D RR+NVA+TRA+ ++ + +T+ D RL+ +F +
Sbjct: 743 IFSCTRSNHTNTIGFLKDARRLNVAITRAKYGLFVLGNIKTLQKDPLWNRLLVHFRDKGA 802
Query: 628 YLSG 631
+ G
Sbjct: 803 LVEG 806
>gi|226286939|gb|EEH42452.1| ATP-dependent helicase NAM7 [Paracoccidioides brasiliensis Pb18]
Length = 1087
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 239/458 (52%), Gaps = 54/458 (11%)
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASN 250
P +L+ SQ +A+ K++ K + ++ GPPGTGKT T II K G ++L CA SN
Sbjct: 433 PGLPDLNSSQTNAV-KSVLQKPLSLIQGPPGTGKTVTSANIIYHLAKINGGQVLVCAPSN 491
Query: 251 IAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG 310
+AVD + ER+ ++ VR+ +R + +ES + L + S+I E+ LN
Sbjct: 492 VAVDQLCERIHKTGLKTVRVTAKSR---EDVESPVGFLSLHEQVHNNDSNI--ELVKLN- 545
Query: 311 KLLKTKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLD 366
+++ EL LS ++E+K +QL A +++ NADV+ T GA +L
Sbjct: 546 ------------QLKAELGELSSQDEKKYKQLVRAAEREILSNADVICCTCVGAGDPRLA 593
Query: 367 NTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFE 425
F V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFE
Sbjct: 594 KFKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFE 653
Query: 426 RLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDI- 484
RL L + L VQYRMH + + S Y+ ++ +GV TE LL D+
Sbjct: 654 RLVILGCAPIR--LNVQYRMHPCLSEFPSNMFYDGSLQ---NGV-----TESERLLKDVD 703
Query: 485 -------------AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPY 531
+ EE S +N EA R ++GV S IGIITPY
Sbjct: 704 FPWPVAHNPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSSIGIITPY 763
Query: 532 AAQ-VVLLKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR 586
Q ++ +++ K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD
Sbjct: 764 EGQRSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDP 823
Query: 587 RRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
RR+NVA+TRA+ ++ + + +S L+ +F+E
Sbjct: 824 RRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKE 861
>gi|225683333|gb|EEH21617.1| DNA-binding protein SMUBP-2 [Paracoccidioides brasiliensis Pb03]
Length = 1074
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 154/454 (33%), Positives = 238/454 (52%), Gaps = 54/454 (11%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVD 254
+L+ SQ +A+ K++ K + ++ GPPGTGKT T II K G ++L CA SN+AVD
Sbjct: 443 DLNSSQTNAV-KSVLQKPLSLIQGPPGTGKTVTSANIIYHLAKINGGQVLVCAPSNVAVD 501
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
+ ER+ ++ VR+ +R + +ES + L + S+I E+ LN
Sbjct: 502 QLCERIHKTGLKTVRVTAKSR---EDVESPVGFLSLHEQVHNNDSNI--ELVKLN----- 551
Query: 315 TKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
+++ EL LS ++E+K +QL A +++ NADV+ T GA +L F
Sbjct: 552 --------QLKAELGELSSQDEKKYKQLVRAAEREILSNADVICCTCVGAGDPRLAKFKF 603
Query: 371 DLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL
Sbjct: 604 RTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVI 663
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDI----- 484
L + L VQYRMH + + S Y+ ++ +GV TE LL D+
Sbjct: 664 LGCAPIR--LNVQYRMHPCLSEFPSNMFYDGSLQ---NGV-----TESERLLKDVDFPWP 713
Query: 485 ---------AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ- 534
+ EE S +N EA R ++GV S IGIITPY Q
Sbjct: 714 VAHNPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSSIGIITPYEGQR 773
Query: 535 VVLLKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
++ +++ K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+N
Sbjct: 774 SYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLN 833
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
VA+TRA+ ++ + + +S L+ +F+E
Sbjct: 834 VALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKE 867
>gi|443896129|dbj|GAC73473.1| RNA helicase nonsense mRNA reducing factor [Pseudozyma antarctica
T-34]
Length = 1090
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 147/451 (32%), Positives = 236/451 (52%), Gaps = 36/451 (7%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+HSQ +A+ K++ K + ++ GPPGTGKT T I+ Q K +L CA SN+AVD
Sbjct: 485 LNHSQVNAV-KSVLKKPLSLIQGPPGTGKTVTSASIVYQLSKMNPGPVLVCAPSNVAVDQ 543
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + L+S + L ++ +D E++ KL++
Sbjct: 544 LTEKIHATGLKVVRLTAKSR---EALDSPIGFLTLHEQVAN--NDTHVELQ----KLIQL 594
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDL 372
K++ Q EL S +ERK + L +++ ADV+ T G +L +F
Sbjct: 595 KNE------QGELS--SSDERKYKALTRACEKEILSTADVICCTCVGCGDPRLSKINFRT 646
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V++DEA QA E C I L+ G + + GDHLQL P + + +A + GL ++LFERL L
Sbjct: 647 VLVDEATQAAEPECMIPLVMGCKQVVFVGDHLQLGPVIMNKKAARAGLSQSLFERLIMLG 706
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L +QYRMH + + S Y ++ + +R + P+L ++
Sbjct: 707 NRPIR--LEIQYRMHPCLSEFPSNMFYEGTLQNGITAQERLRAKVDFPWPVPSLPMMFFQ 764
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA R ++GV IGI+TPY Q V +++
Sbjct: 765 NLGQEEISSSGTSFLNRTEASNVEKIVTRFFKAGVEPWQIGIVTPYEGQRSYIVNHMQLH 824
Query: 542 RS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S K + K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRAR
Sbjct: 825 GSLKKELYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVALTRARFGL 884
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
++ + + ++ L+ +++E + G
Sbjct: 885 VILGNPKVLNKHPLWHYLLVHYKEKGCLVEG 915
>gi|344241326|gb|EGV97429.1| Regulator of nonsense transcripts 1 [Cricetulus griseus]
Length = 771
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 228/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 123 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 181
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 182 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 230
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 231 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 285
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 286 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 345
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 346 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 403
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 404 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 463
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 464 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 523
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 524 IIVGNPKALSKQPLWNHLLSYYKEQKALVEG 554
>gi|410074371|ref|XP_003954768.1| hypothetical protein KAFR_0A01950 [Kazachstania africana CBS 2517]
gi|372461350|emb|CCF55633.1| hypothetical protein KAFR_0A01950 [Kazachstania africana CBS 2517]
Length = 995
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 177/556 (31%), Positives = 280/556 (50%), Gaps = 65/556 (11%)
Query: 110 GQGVVYRLKDSSITVAFDDI-----------PEEGLNSPLRLEKLANEVTYRRMKDALIQ 158
G+G + RL +S F D P L S E + +Y RM+DAL +
Sbjct: 325 GRGYIVRLPNS-----FQDTFTLELKPSKTPPPIHLTSGFTAEFIWKGTSYDRMQDALKK 379
Query: 159 LSKGVQNGPAAGLIPV-LFGEQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSK 212
+ V +G + + G + + L K+++ F + L+ SQ +A+ K L +
Sbjct: 380 FA--VDKKSISGYLYYKILGHEVVDISFDVPLPKEMSIPQF-TKLNDSQSNAVKKVLQ-R 435
Query: 213 NVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLG 271
+ ++ GPPGTGKT T I+ K +IL CA SN+AVD++ +L +++VRL
Sbjct: 436 PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLT 495
Query: 272 HPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTL 331
+R + +ES++ + L ++ +A + E+K KLLK KD E+ L
Sbjct: 496 AKSR---EDVESSVSSLAL---HNLVARSSQGELK----KLLKMKD---------EIGEL 536
Query: 332 SKEERKR----QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACW 387
S + KR + A ++++ ADVV T GA ++LD F V+IDE+ QA E C
Sbjct: 537 SAADTKRFVKLVRKAESEILAKADVVCCTCVGAGDKRLD-AKFRTVLIDESTQASEPECL 595
Query: 388 IALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMH 446
I ++KG++ IL GDH QL P + +A GL ++LFERL L V L VQYRM+
Sbjct: 596 IPIVKGAKQVILVGDHQQLGPVILERKAADAGLRQSLFERLISL--GHVPIRLEVQYRMN 653
Query: 447 EHIMNWSSKQLYNSKIKAHPSGVKRT--SSTEPTLL----LIDIAGCDMEEKKDEEDSTM 500
++ + S Y ++ + +RT +ST P + ++ A EE S +
Sbjct: 654 PNLSEFPSNMFYEGSLQNGVTIEQRTVSNSTFPWPIHGVPMMFWANYGREEISANGTSYL 713
Query: 501 NEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILRSKDDKLKNM----EVST 555
N EA RL + GV IG+ITPY Q +L+ ++ KN+ EV++
Sbjct: 714 NRIEAMNCERIITRLFKDGVKPEQIGVITPYEGQRAYILQYMQMNGVLDKNLYVKVEVAS 773
Query: 556 VDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFL 615
VD FQGREK+ II+S VR+N ++ +GFL D RR+NV +TRA+ ++ + ++S +
Sbjct: 774 VDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLIILGNPRSLSRNLLW 833
Query: 616 KRLIEYFEEHAEYLSG 631
L+ +F E + G
Sbjct: 834 NHLLIHFREKGCLVEG 849
>gi|258570655|ref|XP_002544131.1| ATP-dependent helicase NAM7 [Uncinocarpus reesii 1704]
gi|237904401|gb|EEP78802.1| ATP-dependent helicase NAM7 [Uncinocarpus reesii 1704]
Length = 1075
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 154/450 (34%), Positives = 233/450 (51%), Gaps = 48/450 (10%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ KA+ K + ++ GPPGTGKT T +I K G ++L CA SN+AVD
Sbjct: 423 LNPSQVNAV-KAVLQKPLSLIQGPPGTGKTVTSATVIYHLAKLTGGQVLVCAPSNVAVDQ 481
Query: 256 IVERLVPHRVRLVRLGHPAR--LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
+ E + ++ VR+ +R + V +L QV D+ N +L+
Sbjct: 482 LCECIHRTGLKTVRVTAKSREDVESPVRHLSLHEQVRNNDS--------------NVELM 527
Query: 314 K-TKDKNTRREIQKELRTLSKEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTS 369
K T+ KN E+ S++E+K +QL A +++ NADV+ T GA +L
Sbjct: 528 KLTQLKNELGELS------SQDEKKFKQLTRAAEKEILTNADVICCTCVGAGDPRLAKFK 581
Query: 370 FDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
F V+IDE+ Q+ E C I L+ G + +L GDHLQL P + + +A K GL ++LFERL
Sbjct: 582 FRTVLIDESTQSSEPECMIPLVMGCKQVVLVGDHLQLGPVIMNKKAAKAGLNQSLFERLV 641
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR---------TSSTEPTL 479
L + L VQYRMH + ++ S Y+ ++ + R S +P +
Sbjct: 642 ILGCAPIR--LNVQYRMHPCLSSFPSNMFYDGSLQNGVTSDDRLLKDVDFPWPISDKPMM 699
Query: 480 LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ---VV 536
++ EE S +N EA R ++GV S IGIITPY Q VV
Sbjct: 700 FWSNLGN---EEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSAIGIITPYEGQRSYVV 756
Query: 537 LLKILRS--KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
L K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+NVA+T
Sbjct: 757 SSMQLNGTYKKEAYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALT 816
Query: 595 RARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
RA+ ++ + + +S L+ +F+E
Sbjct: 817 RAKYGLVILGNPKVLSKHPLWNYLLRHFKE 846
>gi|295657686|ref|XP_002789409.1| ATP-dependent helicase NAM7 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283831|gb|EEH39397.1| ATP-dependent helicase NAM7 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1087
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 239/458 (52%), Gaps = 54/458 (11%)
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASN 250
P +L+ SQ +A+ K++ K + ++ GPPGTGKT T II K G ++L CA SN
Sbjct: 433 PGLPDLNSSQTNAV-KSVLQKPLSLIQGPPGTGKTVTSANIIYHLAKINGGQVLVCAPSN 491
Query: 251 IAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG 310
+AVD + ER+ ++ VR+ +R + +ES + L + S+I E+ LN
Sbjct: 492 VAVDQLCERIHKTGLKTVRVTAKSR---EDVESPVGFLSLHEQVHNNDSNI--ELVKLN- 545
Query: 311 KLLKTKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLD 366
+++ EL LS ++E+K +QL A +++ NADV+ T GA +L
Sbjct: 546 ------------QLKAELGELSSQDEKKYKQLVRAAEKEILSNADVICCTCVGAGDPRLA 593
Query: 367 NTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFE 425
F V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFE
Sbjct: 594 KFKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFE 653
Query: 426 RLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDI- 484
RL L + L VQYRMH + + S Y+ ++ +GV TE LL D+
Sbjct: 654 RLVILGCAPIR--LNVQYRMHPCLSEFPSNMFYDGSLQ---NGV-----TESERLLKDVD 703
Query: 485 -------------AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPY 531
+ EE S +N EA R ++GV S IGIITPY
Sbjct: 704 FPWPVAHNPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSSIGIITPY 763
Query: 532 AAQ-VVLLKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR 586
Q ++ +++ K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD
Sbjct: 764 EGQRSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDP 823
Query: 587 RRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
RR+NVA+TRA+ ++ + + +S L+ +F+E
Sbjct: 824 RRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKE 861
>gi|296816783|ref|XP_002848728.1| ATP-dependent helicase NAM7 [Arthroderma otae CBS 113480]
gi|238839181|gb|EEQ28843.1| ATP-dependent helicase NAM7 [Arthroderma otae CBS 113480]
Length = 1088
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 152/450 (33%), Positives = 236/450 (52%), Gaps = 48/450 (10%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ KA+ K + ++ GPPGTGKT T II K ++L CA SN+AVD
Sbjct: 434 LNSSQINAV-KAVLQKPLSLIQGPPGTGKTVTSATIIYHLAKVNAGQVLVCAPSNVAVDQ 492
Query: 256 IVERLVPHRVRLVRLGHPAR--LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
+ E + ++ VR+ +R + V +L QV R ++S++ E+ LN
Sbjct: 493 LCECIHRTGLKTVRVTAKSREDVESPVRHLSLHEQV-RNNDSNI------ELVKLN---- 541
Query: 314 KTKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTS 369
+++ EL LS ++E+K +QL A +++ NADV+ T GA +L +
Sbjct: 542 ---------QLKAELGELSSQDEKKYKQLTRAAEKEILTNADVICCTCVGAGDPRLAKSK 592
Query: 370 FDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
F V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL
Sbjct: 593 FRTVLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLV 652
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR---------TSSTEPTL 479
L + L VQYRMH + +SS Y ++ S R + +P +
Sbjct: 653 ILGCAPIR--LNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMM 710
Query: 480 LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----V 535
++ EE S +N EA R ++GV S IGIITPY Q V
Sbjct: 711 FWSNLGN---EEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSGIGIITPYEGQRSYVV 767
Query: 536 VLLKILRS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
+++ + K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+NVA+T
Sbjct: 768 SSMQLTGTFKKESYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALT 827
Query: 595 RARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
RA+ ++ + + +S L+ +F+E
Sbjct: 828 RAKYGLVILGNPKVLSKHPLWNYLLRHFKE 857
>gi|146411955|ref|XP_001481949.1| hypothetical protein PGUG_05712 [Meyerozyma guilliermondii ATCC
6260]
Length = 949
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 183/587 (31%), Positives = 269/587 (45%), Gaps = 79/587 (13%)
Query: 88 KFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS---SITVAFD---DIPEEGLNSPLRLE 141
K D ++L N D P G G + RL ++ T+ + + P L + E
Sbjct: 270 KVAVGDEIILHYNGGD-REPWQGSGFIVRLPNAYHNEFTLELNPQKNAPPTHLTTNFTAE 328
Query: 142 KLANEVTYRRMKDALIQLSKGVQNGPAAGLI----------PVLFGEQKPTVLKKDIAFK 191
+ +Y RM+ AL S V +G I PV F P L
Sbjct: 329 FVWKGTSYNRMQHAL--KSFAVDEKSVSGYIYHRILGHNVEPVEFSFNLPEKLSI----- 381
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQ---------------- 235
P + L+ SQ++A+ L + + ++ GPPGTGKT T II
Sbjct: 382 PNLTALNESQENAVRTVLQ-RPLSLIQGPPGTGKTFTSATIIYHLRNMINKKPSGKKSSK 440
Query: 236 --EVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGD 293
+ + KIL CA SN+AVD++ E++ V+++RL +R + L S L L
Sbjct: 441 SKKKQTAEKILVCAPSNVAVDHLAEKIANLGVKVMRLTAKSREDAESLVSHLSLHNL--- 497
Query: 294 NSSLASDIRKEMKALNGKLLKTKDK-NTRREI-QKELRTLSKEERKRQQLAVTDVIKNAD 351
+ N +L K +DK N E+ KE K RK A V+++ +
Sbjct: 498 -----------IVQTNKRLQKLQDKKNAEGELLAKEAVEFHKLTRK----AEKSVMEDCE 542
Query: 352 VVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQ 410
V+ +T GA +LD+ F V+IDE+ QA E I ++KG++ IL GDH QL P +
Sbjct: 543 VICSTCVGAGDHRLDSMVFRAVLIDESTQASEPEIMIPIVKGAKQVILVGDHQQLGPVIL 602
Query: 411 SVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK 470
+A GL ++LFERL L V L VQYRMH + + S Y ++ S
Sbjct: 603 HKKAGDAGLKQSLFERLVVL--GHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVSSES 660
Query: 471 RTSSTE----PTL--LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD 524
RT E P L ++ A EE S +N EA RL + GV A
Sbjct: 661 RTFKNETFPWPVLDFPMMFWANYGREEISASGYSYLNRVEAMNVEKIITRLFKQGVKAEQ 720
Query: 525 IGIITPYAAQ-------VVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSK 577
IG++TPY Q ++L L K ++ +EV++VD FQGREK+ II+S VR+N
Sbjct: 721 IGVVTPYEGQRAYILQHMLLTGSLVDKREQYSEVEVASVDAFQGREKDYIILSCVRANET 780
Query: 578 KEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+GFLSD RR+NVA+TRA+ +V + +S + L+ +F E
Sbjct: 781 HGIGFLSDSRRLNVALTRAKYGLVIVGNPRCLSKNKLWNHLLIHFRE 827
>gi|315049715|ref|XP_003174232.1| ATP-dependent helicase NAM7 [Arthroderma gypseum CBS 118893]
gi|311342199|gb|EFR01402.1| ATP-dependent helicase NAM7 [Arthroderma gypseum CBS 118893]
Length = 1094
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 152/450 (33%), Positives = 236/450 (52%), Gaps = 48/450 (10%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ KA+ K + ++ GPPGTGKT T II K ++L CA SN+AVD
Sbjct: 440 LNSSQINAV-KAVLQKPLSLIQGPPGTGKTVTSATIIYHLAKVNAGQVLVCAPSNVAVDQ 498
Query: 256 IVERLVPHRVRLVRLGHPAR--LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
+ E + ++ VR+ +R + V +L QV R ++S++ E+ LN
Sbjct: 499 LCECIHRTGLKTVRVTAKSREDVESPVRHLSLHEQV-RNNDSNI------ELVKLN---- 547
Query: 314 KTKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTS 369
+++ EL LS ++E+K +QL A +++ NADV+ T GA +L +
Sbjct: 548 ---------QLKTELGELSSQDEKKYKQLTRAAEKEILTNADVICCTCVGAGDPRLAKSK 598
Query: 370 FDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
F V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL
Sbjct: 599 FRTVLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLV 658
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR---------TSSTEPTL 479
L + L VQYRMH + +SS Y ++ S R + +P +
Sbjct: 659 ILGCAPIR--LNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMM 716
Query: 480 LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----V 535
++ EE S +N EA R ++GV S IGIITPY Q V
Sbjct: 717 FWSNLGN---EEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSGIGIITPYEGQRSYVV 773
Query: 536 VLLKILRS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
+++ + K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+NVA+T
Sbjct: 774 SSMQLTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALT 833
Query: 595 RARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
RA+ ++ + + +S L+ +F+E
Sbjct: 834 RAKYGLVILGNPKVLSKHPLWNYLLRHFKE 863
>gi|326479319|gb|EGE03329.1| hypothetical protein TEQG_02362 [Trichophyton equinum CBS 127.97]
Length = 1093
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 152/451 (33%), Positives = 236/451 (52%), Gaps = 48/451 (10%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ KA+ K + ++ GPPGTGKT T II K ++L CA SN+AVD
Sbjct: 439 LNSSQINAV-KAVLQKPLSLIQGPPGTGKTVTSATIIYHLAKVNAGQVLVCAPSNVAVDQ 497
Query: 256 IVERLVPHRVRLVRLGHPAR--LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
+ E + ++ VR+ +R + V +L QV R ++S++ E+ LN
Sbjct: 498 LCECIHRTGLKTVRVTAKSREDVESPVRHLSLHEQV-RNNDSNI------ELVKLN---- 546
Query: 314 KTKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTS 369
+++ EL LS ++E+K +QL A +++ NADV+ T GA +L +
Sbjct: 547 ---------QLKTELGELSSQDEKKYKQLTRAAEKEILTNADVICCTCVGAGDPRLAKSK 597
Query: 370 FDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
F V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL
Sbjct: 598 FRTVLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLV 657
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR---------TSSTEPTL 479
L + L VQYRMH + +SS Y ++ S R + +P +
Sbjct: 658 ILGCAPIR--LNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMM 715
Query: 480 LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----V 535
++ EE S +N EA R ++GV S IGIITPY Q V
Sbjct: 716 FWSNLGN---EEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSGIGIITPYEGQRSYVV 772
Query: 536 VLLKILRS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
+++ + K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+NVA+T
Sbjct: 773 SSMQLTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALT 832
Query: 595 RARRQCCLVCDTETVSSDGFLKRLIEYFEEH 625
RA+ ++ + + +S L+ +F+E
Sbjct: 833 RAKYGLVILGNPKVLSKHPLWNYLLRHFKEQ 863
>gi|326469176|gb|EGD93185.1| ATP-dependent DNA helicase [Trichophyton tonsurans CBS 112818]
Length = 1064
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 152/451 (33%), Positives = 236/451 (52%), Gaps = 48/451 (10%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ KA+ K + ++ GPPGTGKT T II K ++L CA SN+AVD
Sbjct: 410 LNSSQINAV-KAVLQKPLSLIQGPPGTGKTVTSATIIYHLAKVNAGQVLVCAPSNVAVDQ 468
Query: 256 IVERLVPHRVRLVRLGHPAR--LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
+ E + ++ VR+ +R + V +L QV R ++S++ E+ LN
Sbjct: 469 LCECIHRTGLKTVRVTAKSREDVESPVRHLSLHEQV-RNNDSNI------ELVKLN---- 517
Query: 314 KTKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTS 369
+++ EL LS ++E+K +QL A +++ NADV+ T GA +L +
Sbjct: 518 ---------QLKTELGELSSQDEKKYKQLTRAAEKEILTNADVICCTCVGAGDPRLAKSK 568
Query: 370 FDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
F V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL
Sbjct: 569 FRTVLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLV 628
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR---------TSSTEPTL 479
L + L VQYRMH + +SS Y ++ S R + +P +
Sbjct: 629 ILGCAPIR--LNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMM 686
Query: 480 LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----V 535
++ EE S +N EA R ++GV S IGIITPY Q V
Sbjct: 687 FWSNLGN---EEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSGIGIITPYEGQRSYVV 743
Query: 536 VLLKILRS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
+++ + K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+NVA+T
Sbjct: 744 SSMQLTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALT 803
Query: 595 RARRQCCLVCDTETVSSDGFLKRLIEYFEEH 625
RA+ ++ + + +S L+ +F+E
Sbjct: 804 RAKYGLVILGNPKVLSKHPLWNYLLRHFKEQ 834
>gi|47087327|ref|NP_998639.1| regulator of nonsense transcripts 1 [Danio rerio]
gi|28278858|gb|AAH45353.1| Upf1 regulator of nonsense transcripts homolog (yeast) [Danio
rerio]
gi|240248221|emb|CAX18770.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Danio
rerio]
Length = 1100
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 152/453 (33%), Positives = 232/453 (51%), Gaps = 38/453 (8%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 450 DLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 508
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 509 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 557
Query: 313 LKTKDKNTRREIQKELRTLSKEERKR--QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
+ KD+ EL + S E+R R ++ A +++ NADV+ T GA +L F
Sbjct: 558 QQLKDET------GELSS-SDEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQF 610
Query: 371 DLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL
Sbjct: 611 RSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVV 670
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLID 483
L + L VQYRMH + + S Y ++ + R +P +
Sbjct: 671 LGIRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRLKKGFDFQWPQPDKPMFF 728
Query: 484 IAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLK 539
EE S +N EA RL+++G IGIITPY Q V ++
Sbjct: 729 YVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQYMQ 788
Query: 540 ILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARR 598
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 789 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 848
Query: 599 QCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 849 GVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 881
>gi|327293656|ref|XP_003231524.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
gi|326466152|gb|EGD91605.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
Length = 1093
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 152/451 (33%), Positives = 236/451 (52%), Gaps = 48/451 (10%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ KA+ K + ++ GPPGTGKT T II K ++L CA SN+AVD
Sbjct: 439 LNSSQINAV-KAVLQKPLSLIQGPPGTGKTVTSATIIYHLAKVNAGQVLVCAPSNVAVDQ 497
Query: 256 IVERLVPHRVRLVRLGHPAR--LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
+ E + ++ VR+ +R + V +L QV R ++S++ E+ LN
Sbjct: 498 LCECIHRTGLKTVRVTAKSREDVESPVRHLSLHEQV-RNNDSNI------ELVKLN---- 546
Query: 314 KTKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTS 369
+++ EL LS ++E+K +QL A +++ NADV+ T GA +L +
Sbjct: 547 ---------QLKTELGELSSQDEKKYKQLTRAAEKEILTNADVICCTCVGAGDPRLAKSK 597
Query: 370 FDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
F V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL
Sbjct: 598 FRTVLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLV 657
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR---------TSSTEPTL 479
L + L VQYRMH + +SS Y ++ S R + +P +
Sbjct: 658 ILGCAPIR--LNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMM 715
Query: 480 LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----V 535
++ EE S +N EA R ++GV S IGIITPY Q V
Sbjct: 716 FWSNLGN---EEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSGIGIITPYEGQRSYVV 772
Query: 536 VLLKILRS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
+++ + K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+NVA+T
Sbjct: 773 SSMQLTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALT 832
Query: 595 RARRQCCLVCDTETVSSDGFLKRLIEYFEEH 625
RA+ ++ + + +S L+ +F+E
Sbjct: 833 RAKYGLVILGNPKVLSKHPLWNYLLRHFKEQ 863
>gi|302505946|ref|XP_003014930.1| hypothetical protein ARB_06689 [Arthroderma benhamiae CBS 112371]
gi|291178501|gb|EFE34290.1| hypothetical protein ARB_06689 [Arthroderma benhamiae CBS 112371]
Length = 1080
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 152/450 (33%), Positives = 236/450 (52%), Gaps = 48/450 (10%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ KA+ K + ++ GPPGTGKT T II K ++L CA SN+AVD
Sbjct: 426 LNSSQINAV-KAVLQKPLSLIQGPPGTGKTVTSATIIYHLAKVNAGQVLVCAPSNVAVDQ 484
Query: 256 IVERLVPHRVRLVRLGHPAR--LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
+ E + ++ VR+ +R + V +L QV R ++S++ E+ LN
Sbjct: 485 LCECIHRTGLKTVRVTAKSREDVESPVRHLSLHEQV-RNNDSNI------ELVKLN---- 533
Query: 314 KTKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTS 369
+++ EL LS ++E+K +QL A +++ NADV+ T GA +L +
Sbjct: 534 ---------QLKTELGELSSQDEKKYKQLTRAAEKEILTNADVICCTCVGAGDPRLAKSK 584
Query: 370 FDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
F V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL
Sbjct: 585 FRTVLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLV 644
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR---------TSSTEPTL 479
L + L VQYRMH + +SS Y ++ S R + +P +
Sbjct: 645 ILGCAPIR--LNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMM 702
Query: 480 LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----V 535
++ EE S +N EA R ++GV S IGIITPY Q V
Sbjct: 703 FWSNLGN---EEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSGIGIITPYEGQRSYVV 759
Query: 536 VLLKILRS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
+++ + K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+NVA+T
Sbjct: 760 SSMQLTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALT 819
Query: 595 RARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
RA+ ++ + + +S L+ +F+E
Sbjct: 820 RAKYGLVILGNPKVLSKHPLWNYLLRHFKE 849
>gi|440632949|gb|ELR02868.1| regulator-nonsense transcripts 1 [Geomyces destructans 20631-21]
Length = 1099
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 147/448 (32%), Positives = 233/448 (52%), Gaps = 44/448 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ K++ K + ++ GPPGTGKT T +I K G ++L CA SN+AVD
Sbjct: 451 LNGSQINAV-KSVLQKPLSLIQGPPGTGKTVTSATVIYHLSKVNGGQVLVCAPSNVAVDQ 509
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ ER+ +++VRL +R + +ES++ SL +R M N +L K
Sbjct: 510 LCERIHRTGLKVVRLTAKSR---EDVESSVGFL-------SLHEQVR--MNDSNLELTKL 557
Query: 316 KDKNTRREIQKELRTLSKEERKR----QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+++ EL LS ++ K+ + A +++ NADV+ T GA +L F
Sbjct: 558 S------QLKSELGELSSQDEKKFKSLTRAAEREILNNADVICCTCVGAGDPRLSKMKFR 611
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL L
Sbjct: 612 TVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 671
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR---------TSSTEPTLLL 481
+ L VQYRMH + + S Y ++ + +R P +
Sbjct: 672 GLAPIR--LNVQYRMHPCLSEFPSNMFYEGSLQNGVTMQQRLRRDVDFPWPVGDTPMMFW 729
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ--VVLLK 539
++ EE S +N EA R ++GV +DIG+ITPY Q V+
Sbjct: 730 SNLGN---EEISASGTSYLNRTEASNVEKIVTRFFKAGVQPADIGVITPYEGQRSYVVSS 786
Query: 540 ILRS---KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
+ + K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+NVA+TRA
Sbjct: 787 MQNTGTFKKENYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRA 846
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+ ++ + + +S L+++F+E
Sbjct: 847 KYGLVILGNPKVLSKHPLWHYLLQHFKE 874
>gi|261201590|ref|XP_002628009.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis SLH14081]
gi|239590106|gb|EEQ72687.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis SLH14081]
gi|239611816|gb|EEQ88803.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis ER-3]
gi|327352930|gb|EGE81787.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis ATCC 18188]
Length = 1092
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 154/454 (33%), Positives = 238/454 (52%), Gaps = 54/454 (11%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVD 254
+L+ SQ +A+ K++ K + ++ GPPGTGKT T II K G ++L CA SN+AVD
Sbjct: 442 DLNSSQTNAV-KSVLQKPLSLIQGPPGTGKTVTSANIIYNLAKINGGQVLVCAPSNVAVD 500
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
+ ER+ ++ VR+ +R + +ES + L + S+I E+ LN
Sbjct: 501 QLCERIHRTGLKTVRVTAKSR---EDVESPVGFLSLHEQVHNNDSNI--ELVKLN----- 550
Query: 315 TKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
+++ EL LS ++E+K +QL A +++ NADV+ T GA +L F
Sbjct: 551 --------QLKAELGELSSQDEKKFKQLVRAAEKEILSNADVICCTCVGAGDPRLAKFKF 602
Query: 371 DLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL
Sbjct: 603 RTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVI 662
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDI----- 484
L + L VQYRMH + + S Y+ ++ +GV TE LL D+
Sbjct: 663 LGCAPIR--LNVQYRMHPCLSEFPSNMFYDGSLQ---NGV-----TESERLLKDVDFPWP 712
Query: 485 ---------AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ- 534
+ EE S +N EA R ++GV S IGIITPY Q
Sbjct: 713 VAHNPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSSIGIITPYEGQR 772
Query: 535 VVLLKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
++ +++ K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+N
Sbjct: 773 SYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLN 832
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
VA+TRA+ ++ + + +S L+ +F+E
Sbjct: 833 VALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKE 866
>gi|255713384|ref|XP_002552974.1| KLTH0D05786p [Lachancea thermotolerans]
gi|238934354|emb|CAR22536.1| KLTH0D05786p [Lachancea thermotolerans CBS 6340]
Length = 982
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 168/547 (30%), Positives = 275/547 (50%), Gaps = 45/547 (8%)
Query: 110 GQGVVYRLKDS---SITVAFDD---IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGV 163
G G + RL +S +T+ P N+ E + +Y RM++A+ + + V
Sbjct: 319 GHGYIVRLPNSFQDQLTLELKPSKTPPPTSFNTGFTAEFVWKGTSYDRMQEAMKKFAV-V 377
Query: 164 QNGPAAGLIPVLFGEQKPTVLKKDIAFK-----PFNSNLDHSQKDAISKALSSKNVFMLH 218
+ + L + G + P L+ D+ P + L+ SQ +AI L + + ++
Sbjct: 378 KKSVSGFLYYKILGHEVPD-LEFDVNLPEQFSIPHFTQLNVSQANAIRHVLQ-RPLSLIQ 435
Query: 219 GPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLL 277
GPPGTGKT T I+ K +IL CA SN+AVD++ +L +++VRL +R
Sbjct: 436 GPPGTGKTVTSATIVYHLSKLHKERILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSR-- 493
Query: 278 PQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERK 337
+ +ES++ N L + + + K K L ++ + + K+ RK
Sbjct: 494 -EDVESSVS-------NLGLHNLVSRSAKG-ELKKLLKLKEDVGELSPSDAKKFVKQVRK 544
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-C 396
+ +++K ADVV T GA ++L+ F V+IDE+ QA E C I ++KG++
Sbjct: 545 SE----LEILKKADVVCCTCVGAGDKRLE-AKFRTVLIDESTQASEPECLIPIVKGAKQV 599
Query: 397 ILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQ 456
+L GDH QL P + +A GL ++LFERL L + L VQYRM+ H+ + S
Sbjct: 600 VLVGDHQQLGPVILDRKAADAGLKQSLFERLISL--GHIPIRLEVQYRMNPHLSEFPSNM 657
Query: 457 LYNSKIKAHPSGVKR--TSSTEPT----LLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMA 510
Y ++ + +R T+ST P L ++ + EE S +N EA
Sbjct: 658 FYEGSLQNGVTIEQRSVTNSTFPWPIHDLPMMFWSNYGREEISGNGTSYLNRIEAMNCER 717
Query: 511 HAKRLIQSGVHASDIGIITPYAAQ----VVLLKILRSKDDKLK-NMEVSTVDGFQGREKE 565
+L + GV IG+ITPY Q V +++ S D +L N+EV++VD FQGREK+
Sbjct: 718 VITKLFKDGVKPDQIGVITPYEGQRAYIVQYMQMNGSMDKELYMNVEVASVDAFQGREKD 777
Query: 566 AIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEH 625
II+S VR+N ++ +GFLSD RR+NVA+TR++ ++ + ++S + L+ YF E
Sbjct: 778 YIILSCVRANEQQAIGFLSDPRRLNVALTRSKYGLVILGNPRSLSRNSLWSHLLVYFREK 837
Query: 626 AEYLSGS 632
+ G+
Sbjct: 838 GCLVEGA 844
>gi|302660352|ref|XP_003021856.1| hypothetical protein TRV_04033 [Trichophyton verrucosum HKI 0517]
gi|291185774|gb|EFE41238.1| hypothetical protein TRV_04033 [Trichophyton verrucosum HKI 0517]
Length = 1080
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 152/450 (33%), Positives = 236/450 (52%), Gaps = 48/450 (10%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ KA+ K + ++ GPPGTGKT T II K ++L CA SN+AVD
Sbjct: 426 LNSSQINAV-KAVLQKPLSLIQGPPGTGKTVTSATIIYHLAKVNAGQVLVCAPSNVAVDQ 484
Query: 256 IVERLVPHRVRLVRLGHPAR--LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
+ E + ++ VR+ +R + V +L QV R ++S++ E+ LN
Sbjct: 485 LCECIHRTGLKTVRVTAKSREDVESPVRHLSLHEQV-RNNDSNI------ELVKLN---- 533
Query: 314 KTKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTS 369
+++ EL LS ++E+K +QL A +++ NADV+ T GA +L +
Sbjct: 534 ---------QLKTELGELSSQDEKKYKQLTRAAEKEILTNADVICCTCVGAGDPRLAKSK 584
Query: 370 FDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
F V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL
Sbjct: 585 FRTVLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLV 644
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR---------TSSTEPTL 479
L + L VQYRMH + +SS Y ++ S R + +P +
Sbjct: 645 ILGCAPIR--LNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMM 702
Query: 480 LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----V 535
++ EE S +N EA R ++GV S IGIITPY Q V
Sbjct: 703 FWSNLGN---EEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSGIGIITPYEGQRSYVV 759
Query: 536 VLLKILRS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
+++ + K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+NVA+T
Sbjct: 760 SSMQLTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALT 819
Query: 595 RARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
RA+ ++ + + +S L+ +F+E
Sbjct: 820 RAKYGLVILGNPKVLSKHPLWNYLLRHFKE 849
>gi|225558219|gb|EEH06503.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus G186AR]
gi|240277173|gb|EER40682.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus H143]
Length = 1071
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 154/454 (33%), Positives = 238/454 (52%), Gaps = 54/454 (11%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVD 254
+L+ SQ +A+ K++ K + ++ GPPGTGKT T II K G ++L CA SN+AVD
Sbjct: 421 DLNSSQTNAV-KSVLQKPLSLIQGPPGTGKTVTSANIIYNLAKINGGQVLVCAPSNVAVD 479
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
+ ER+ ++ VR+ +R + +ES + L + S+I E+ LN
Sbjct: 480 QLCERIHRTGLKTVRVTAKSR---EDVESPVGFLSLHEQVHNNDSNI--ELVKLN----- 529
Query: 315 TKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
+++ EL LS ++E+K +QL A +++ NADV+ T GA +L F
Sbjct: 530 --------QLKAELGELSSQDEKKFKQLVRAAEKEILSNADVICCTCVGAGDPRLAKFKF 581
Query: 371 DLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL
Sbjct: 582 RTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVI 641
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDI----- 484
L + L VQYRMH + + S Y+ ++ +GV TE LL D+
Sbjct: 642 LGCAPIR--LNVQYRMHPCLSEFPSNMFYDGSLQ---NGV-----TESERLLKDVDFPWP 691
Query: 485 ---------AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ- 534
+ EE S +N EA R ++GV S IGIITPY Q
Sbjct: 692 VAHNPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSSIGIITPYEGQR 751
Query: 535 VVLLKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
++ +++ K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+N
Sbjct: 752 SYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLN 811
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
VA+TRA+ ++ + + +S L+ +F+E
Sbjct: 812 VALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKE 845
>gi|325093995|gb|EGC47305.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus H88]
Length = 1071
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 154/454 (33%), Positives = 238/454 (52%), Gaps = 54/454 (11%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVD 254
+L+ SQ +A+ K++ K + ++ GPPGTGKT T II K G ++L CA SN+AVD
Sbjct: 421 DLNSSQTNAV-KSVLQKPLSLIQGPPGTGKTVTSANIIYNLAKINGGQVLVCAPSNVAVD 479
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
+ ER+ ++ VR+ +R + +ES + L + S+I E+ LN
Sbjct: 480 QLCERIHRTGLKTVRVTAKSR---EDVESPVGFLSLHEQVHNNDSNI--ELVKLN----- 529
Query: 315 TKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
+++ EL LS ++E+K +QL A +++ NADV+ T GA +L F
Sbjct: 530 --------QLKAELGELSSQDEKKFKQLVRAAEKEILSNADVICCTCVGAGDPRLAKFKF 581
Query: 371 DLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL
Sbjct: 582 RTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVI 641
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDI----- 484
L + L VQYRMH + + S Y+ ++ +GV TE LL D+
Sbjct: 642 LGCAPIR--LNVQYRMHPCLSEFPSNMFYDGSLQ---NGV-----TESERLLKDVDFPWP 691
Query: 485 ---------AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ- 534
+ EE S +N EA R ++GV S IGIITPY Q
Sbjct: 692 VAHNPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSSIGIITPYEGQR 751
Query: 535 VVLLKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
++ +++ K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+N
Sbjct: 752 SYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLN 811
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
VA+TRA+ ++ + + +S L+ +F+E
Sbjct: 812 VALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKE 845
>gi|452824582|gb|EME31584.1| dynamin GTPase [Galdieria sulphuraria]
Length = 1012
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 151/470 (32%), Positives = 243/470 (51%), Gaps = 56/470 (11%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIIL------------QEVKRGSK-I 243
L+ SQK A+ AL S + ++ GPPGTGKT T I+ Q+ ++ S+ I
Sbjct: 441 LNPSQKAAVKAALESP-LSLVQGPPGTGKTVTSATIVYHLANNVKNITQRQKTRKCSRQI 499
Query: 244 LACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVL------RGDNSSL 297
L CA SNIAVD + E++ + +VRL +R + + S++D L R N+
Sbjct: 500 LVCAPSNIAVDQLAEKISCTGLNVVRLCAKSR---EAVSSSVDHLTLHQKLRNRSSNNPN 556
Query: 298 ASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTL 357
A+++ K ++ L+ +L + +++ +R LRTL + + +++++ DV+ T
Sbjct: 557 ATELVKLIQ-LHEELGELNERDDKR-----LRTLKRNFER-------EILESMDVICCTC 603
Query: 358 TGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEK 416
T A R++ + F V+IDEA QA E + L+ G + + GDH QL P V S A K
Sbjct: 604 TTAGDRRIAHFRFRAVLIDEATQATEPESLLPLIHGCKQVVFVGDHCQLGPVVTSKTAAK 663
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST- 475
G G++LFERL L + LT+QYRMH + + S Y ++ + +R S+
Sbjct: 664 AGFGQSLFERLVALGIRPLR--LTIQYRMHPSLTEFPSNMFYEGSLQNGITAAERKPSSV 721
Query: 476 --------EPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGI 527
+P + EE S +N EA+ +++GV IG+
Sbjct: 722 SFPWPVAAKPFFFYVQTGP---EEVSASGTSFLNRVEADAVEKIVSHFLKNGVDPQRIGV 778
Query: 528 ITPYAAQ--VVLLKILRSKDDKL---KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGF 582
ITPY Q ++ LRS +L K +EV++VD FQGREK+ II+S VRSN + +GF
Sbjct: 779 ITPYEGQRAFIVQHFLRSGTMRLELYKEIEVASVDAFQGREKDFIILSCVRSNEHQGIGF 838
Query: 583 LSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
LSD RR+NVA+TRAR ++ + + ++ L+++ +E+ + GS
Sbjct: 839 LSDPRRLNVALTRARFGLIILGNPKVLAKKWLWACLLQHCKENDVLVEGS 888
>gi|12836885|gb|AAK08652.1|AF182947_1 nonsense mRNA reducing factor 1 NORF1 [Mus musculus]
Length = 1113
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 189/644 (29%), Positives = 300/644 (46%), Gaps = 72/644 (11%)
Query: 17 EFVSVMAPLIDLE-------KEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLM 69
++ ++ PL+ LE KE++ +IT L+ KK L D+ LM
Sbjct: 296 QYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN---KKRIAFFTLPKTDSDMRLM 352
Query: 70 --GKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L + KGD+ P K G V+ + N D + L+ SS+ +
Sbjct: 353 QGDEICLRY---KGDLAPLWK-GIGHVIKVPDNYGD--------EIAIELR-SSVGAPVE 399
Query: 128 DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKK 186
+ +++ + ++ RM+ AL + V +G I L G + V+ K
Sbjct: 400 ------VTHNFQVDFVWKSTSFDRMQSALKTFA--VDETSVSGYIYHKLLGHEVEDVVIK 451
Query: 187 DIAFKPFNS----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS- 241
K F + +L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+
Sbjct: 452 CQLPKRFTAQGLPDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNG 510
Query: 242 KILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDI 301
+L CA SNIAVD + E++ +++VRL +R A+D+ V +L + I
Sbjct: 511 PVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQI 560
Query: 302 RK--EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
R M L KL + KD+ E K R ++ A +++ NADV+ T G
Sbjct: 561 RNMDSMPELQ-KLQQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVG 614
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKG 418
A +L F ++IDE+ QA E C + ++ G++ IL GDH QL P V +A K G
Sbjct: 615 AGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAG 674
Query: 419 LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---- 474
L ++LFERL L + L VQYRMH + + S Y ++ + R
Sbjct: 675 LSQSLFERLVVLGIRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDF 732
Query: 475 --TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYA 532
+P + EE S +N EA +L+++G IGIITPY
Sbjct: 733 QWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYE 792
Query: 533 AQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
Q V ++ S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D R
Sbjct: 793 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPR 852
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
R+NVA+TRAR +V + + +S L+ Y++E + G
Sbjct: 853 RLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALVEG 896
>gi|170784811|ref|NP_109605.2| regulator of nonsense transcripts 1 isoform b [Mus musculus]
gi|11993646|gb|AAG42830.1|AF322655_1 regulator of nonsense transcripts 1 [Mus musculus]
gi|30354613|gb|AAH52149.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Mus
musculus]
gi|148696867|gb|EDL28814.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Mus musculus]
Length = 1113
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 189/644 (29%), Positives = 300/644 (46%), Gaps = 72/644 (11%)
Query: 17 EFVSVMAPLIDLE-------KEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLM 69
++ ++ PL+ LE KE++ +IT L+ KK L D+ LM
Sbjct: 296 QYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN---KKRIAFFTLPKTDSDMRLM 352
Query: 70 --GKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L + KGD+ P K G V+ + N D + L+ SS+ +
Sbjct: 353 QGDEICLRY---KGDLAPLWK-GIGHVIKVPDNYGD--------EIAIELR-SSVGAPVE 399
Query: 128 DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKK 186
+ +++ + ++ RM+ AL + V +G I L G + V+ K
Sbjct: 400 ------VTHNFQVDFVWKSTSFDRMQSALKTFA--VDETSVSGYIYHKLLGHEVEDVVIK 451
Query: 187 DIAFKPFNS----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS- 241
K F + +L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+
Sbjct: 452 CQLPKRFTAQGLPDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNG 510
Query: 242 KILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDI 301
+L CA SNIAVD + E++ +++VRL +R A+D+ V +L + I
Sbjct: 511 PVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQI 560
Query: 302 RK--EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
R M L KL + KD+ E K R ++ A +++ NADV+ T G
Sbjct: 561 RNMDSMPELQ-KLQQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVG 614
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKG 418
A +L F ++IDE+ QA E C + ++ G++ IL GDH QL P V +A K G
Sbjct: 615 AGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAG 674
Query: 419 LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---- 474
L ++LFERL L + L VQYRMH + + S Y ++ + R
Sbjct: 675 LSQSLFERLVVLGIRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDF 732
Query: 475 --TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYA 532
+P + EE S +N EA +L+++G IGIITPY
Sbjct: 733 QWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYE 792
Query: 533 AQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
Q V ++ S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D R
Sbjct: 793 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPR 852
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
R+NVA+TRAR +V + + +S L+ Y++E + G
Sbjct: 853 RLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALVEG 896
>gi|109504000|ref|XP_001070971.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Rattus norvegicus]
gi|392353861|ref|XP_003751615.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Rattus norvegicus]
gi|149036014|gb|EDL90680.1| rCG38820 [Rattus norvegicus]
Length = 1113
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 189/644 (29%), Positives = 300/644 (46%), Gaps = 72/644 (11%)
Query: 17 EFVSVMAPLIDLE-------KEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLM 69
++ ++ PL+ LE KE++ +IT L+ KK L D+ LM
Sbjct: 296 QYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN---KKRIAFFTLPKTDSDMRLM 352
Query: 70 --GKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L + KGD+ P K G V+ + N D + L+ SS+ +
Sbjct: 353 QGDEICLRY---KGDLAPLWK-GIGHVIKVPDNYGD--------EIAIELR-SSVGAPVE 399
Query: 128 DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKK 186
+ +++ + ++ RM+ AL + V +G I L G + V+ K
Sbjct: 400 ------VTHNFQVDFVWKSTSFDRMQSALKTFA--VDETSVSGYIYHKLLGHEVEDVVIK 451
Query: 187 DIAFKPFNS----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS- 241
K F + +L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+
Sbjct: 452 CQLPKRFTAQGLPDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNG 510
Query: 242 KILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDI 301
+L CA SNIAVD + E++ +++VRL +R A+D+ V +L + I
Sbjct: 511 PVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQI 560
Query: 302 RK--EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
R M L KL + KD+ E K R ++ A +++ NADV+ T G
Sbjct: 561 RNMDSMPELQ-KLQQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVG 614
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKG 418
A +L F ++IDE+ QA E C + ++ G++ IL GDH QL P V +A K G
Sbjct: 615 AGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAG 674
Query: 419 LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---- 474
L ++LFERL L + L VQYRMH + + S Y ++ + R
Sbjct: 675 LSQSLFERLVVLGIRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDF 732
Query: 475 --TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYA 532
+P + EE S +N EA +L+++G IGIITPY
Sbjct: 733 QWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYE 792
Query: 533 AQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
Q V ++ S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D R
Sbjct: 793 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPR 852
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
R+NVA+TRAR +V + + +S L+ Y++E + G
Sbjct: 853 RLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALVEG 896
>gi|326934529|ref|XP_003213341.1| PREDICTED: regulator of nonsense transcripts 1-like [Meleagris
gallopavo]
Length = 1059
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 226/451 (50%), Gaps = 36/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 413 DLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 471
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 472 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 520
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 521 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 575
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 576 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL- 634
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
L VQYRMH + + S Y ++ + R +P +
Sbjct: 635 ---PWGCLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 691
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 692 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 751
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 752 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 811
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 812 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 842
>gi|119183909|ref|XP_001242931.1| hypothetical protein CIMG_06827 [Coccidioides immitis RS]
Length = 1089
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 160/473 (33%), Positives = 239/473 (50%), Gaps = 50/473 (10%)
Query: 174 VLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII 233
V G K + KK A P L+ SQ +A+ KA+ K + ++ GPPGTGKT T +I
Sbjct: 416 VAAGPMKTQLPKKFTA--PGLPGLNPSQINAV-KAVLQKPLSLIQGPPGTGKTVTSATVI 472
Query: 234 LQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPAR--LLPQVLESALDAQVL 290
K G ++L CA SN+AVD + E + ++ VR+ +R + V +L QV
Sbjct: 473 YHLAKISGGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVESPVRHLSLHEQVR 532
Query: 291 RGDNSSLASDIRKEMKALNGKLLK-TKDKNTRREIQKELRTLSKEERKRQQL---AVTDV 346
D+ N +L+K T+ KN E+ S++E+K +QL A ++
Sbjct: 533 NNDS--------------NVELMKLTQLKNDMGELS------SQDEKKFKQLTRAAEKEI 572
Query: 347 IKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQL 405
+ NADV+ T GA +L F V+IDE+ Q+ E C I L+ G + +L GDHLQL
Sbjct: 573 LSNADVICCTCVGAGDPRLAKFKFRTVLIDESTQSSEPECMIPLVMGCKQVVLVGDHLQL 632
Query: 406 PPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH 465
P + + +A K GL ++LFERL L + L VQYRMH + + S Y ++
Sbjct: 633 GPVIMNKKAAKAGLNQSLFERLVILGCAPIR--LNVQYRMHPCLSAFPSNMFYEGSLQNG 690
Query: 466 PSGVKR---------TSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLI 516
+ R + +P + ++ EE S +N EA R
Sbjct: 691 VTSDDRLLKDVDFPWPVADKPMMFWSNLGN---EEISASGTSYLNRTEAANVEKIVTRFF 747
Query: 517 QSGVHASDIGIITPYAAQ---VVLLKILRS--KDDKLKNMEVSTVDGFQGREKEAIIISM 571
++GV S IGIITPY Q VV L K + K +EV++VD FQGREK+ I++S
Sbjct: 748 KAGVKPSAIGIITPYEGQRSYVVSSMQLNGTYKKEAYKEIEVASVDAFQGREKDFIVLSC 807
Query: 572 VRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
VRSN + +GFLSD RR+NVA+TRA+ ++ + + +S L+ +F+E
Sbjct: 808 VRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLRHFKE 860
>gi|1885356|gb|AAC51140.1| homolog of yeast UPF1 [Homo sapiens]
Length = 1118
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 189/644 (29%), Positives = 300/644 (46%), Gaps = 72/644 (11%)
Query: 17 EFVSVMAPLIDLE-------KEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLM 69
++ ++ PL+ LE KE++ +IT L+ KK L D+ LM
Sbjct: 301 QYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN---KKRIAYFTLPKTDSDMRLM 357
Query: 70 --GKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L + KGD+ P K G V+ + N D + L+ SS+ +
Sbjct: 358 QGDEICLRY---KGDLAPLWK-GIGHVIKVPDNYGD--------EIAIELR-SSVGAPVE 404
Query: 128 DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKK 186
+ +++ + ++ RM+ AL + V +G I L G + V+ K
Sbjct: 405 ------VTHNFQVDFVWKSTSFDRMQSALKTFA--VDETSVSGYIYHKLLGHEVEDVITK 456
Query: 187 DIAFKPFNS----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS- 241
K F + +L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+
Sbjct: 457 CQLPKRFTAQGLPDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNG 515
Query: 242 KILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDI 301
+L CA SNIAVD + E++ +++VRL +R A+D+ V +L + I
Sbjct: 516 PVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQI 565
Query: 302 RK--EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
R M L KL + KD+ E K R ++ A +++ NADV+ T G
Sbjct: 566 RNMDSMPELQ-KLQQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVG 619
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKG 418
A +L F ++IDE+ QA E C + ++ G++ IL GDH QL P V +A K G
Sbjct: 620 AGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAG 679
Query: 419 LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---- 474
L ++LFERL L + L VQYRMH + + S Y ++ + R
Sbjct: 680 LSQSLFERLVVLGIRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDF 737
Query: 475 --TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYA 532
+P + EE S +N EA +L+++G IGIITPY
Sbjct: 738 QWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYE 797
Query: 533 AQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
Q V ++ S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D R
Sbjct: 798 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPR 857
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
R+NVA+TRAR +V + + +S L+ Y++E + G
Sbjct: 858 RLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 901
>gi|303320095|ref|XP_003070047.1| nonsense transcript regulator, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240109733|gb|EER27902.1| nonsense transcript regulator, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320031876|gb|EFW13833.1| ATP-dependent helicase NAM7 [Coccidioides posadasii str. Silveira]
gi|392865836|gb|EAS31677.2| ATP-dependent helicase NAM7 [Coccidioides immitis RS]
Length = 1101
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 160/473 (33%), Positives = 239/473 (50%), Gaps = 50/473 (10%)
Query: 174 VLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII 233
V G K + KK A P L+ SQ +A+ KA+ K + ++ GPPGTGKT T +I
Sbjct: 428 VAAGPMKTQLPKKFTA--PGLPGLNPSQINAV-KAVLQKPLSLIQGPPGTGKTVTSATVI 484
Query: 234 LQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPAR--LLPQVLESALDAQVL 290
K G ++L CA SN+AVD + E + ++ VR+ +R + V +L QV
Sbjct: 485 YHLAKISGGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVESPVRHLSLHEQVR 544
Query: 291 RGDNSSLASDIRKEMKALNGKLLK-TKDKNTRREIQKELRTLSKEERKRQQL---AVTDV 346
D+ N +L+K T+ KN E+ S++E+K +QL A ++
Sbjct: 545 NNDS--------------NVELMKLTQLKNDMGELS------SQDEKKFKQLTRAAEKEI 584
Query: 347 IKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQL 405
+ NADV+ T GA +L F V+IDE+ Q+ E C I L+ G + +L GDHLQL
Sbjct: 585 LSNADVICCTCVGAGDPRLAKFKFRTVLIDESTQSSEPECMIPLVMGCKQVVLVGDHLQL 644
Query: 406 PPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH 465
P + + +A K GL ++LFERL L + L VQYRMH + + S Y ++
Sbjct: 645 GPVIMNKKAAKAGLNQSLFERLVILGCAPIR--LNVQYRMHPCLSAFPSNMFYEGSLQNG 702
Query: 466 PSGVKR---------TSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLI 516
+ R + +P + ++ EE S +N EA R
Sbjct: 703 VTSDDRLLKDVDFPWPVADKPMMFWSNLGN---EEISASGTSYLNRTEAANVEKIVTRFF 759
Query: 517 QSGVHASDIGIITPYAAQ---VVLLKILRS--KDDKLKNMEVSTVDGFQGREKEAIIISM 571
++GV S IGIITPY Q VV L K + K +EV++VD FQGREK+ I++S
Sbjct: 760 KAGVKPSAIGIITPYEGQRSYVVSSMQLNGTYKKEAYKEIEVASVDAFQGREKDFIVLSC 819
Query: 572 VRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
VRSN + +GFLSD RR+NVA+TRA+ ++ + + +S L+ +F+E
Sbjct: 820 VRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLRHFKE 872
>gi|154285820|ref|XP_001543705.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus NAm1]
gi|150407346|gb|EDN02887.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus NAm1]
Length = 1088
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 154/454 (33%), Positives = 238/454 (52%), Gaps = 54/454 (11%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVD 254
+L+ SQ +A+ K++ K + ++ GPPGTGKT T II K G ++L CA SN+AVD
Sbjct: 438 DLNSSQTNAV-KSVLQKPLSLIQGPPGTGKTVTSANIIYNLAKINGGQVLVCAPSNVAVD 496
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
+ ER+ ++ VR+ +R + +ES + L + S+I E+ LN
Sbjct: 497 QLCERIHRTGLKTVRVTAKSR---EDVESPVGFLSLHEQVHNNDSNI--ELVKLN----- 546
Query: 315 TKDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
+++ EL LS ++E+K +QL A +++ NADV+ T GA +L F
Sbjct: 547 --------QLKAELGELSSQDEKKFKQLVRAAEKEILSNADVICCTCVGAGDPRLAKFKF 598
Query: 371 DLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL
Sbjct: 599 RTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVI 658
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDI----- 484
L + L VQYRMH + + S Y+ ++ +GV TE LL D+
Sbjct: 659 LGCAPIR--LNVQYRMHPCLSEFPSNMFYDGSLQ---NGV-----TESERLLKDVDFPWP 708
Query: 485 ---------AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ- 534
+ EE S +N EA R ++GV S IGIITPY Q
Sbjct: 709 VAHNPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSSIGIITPYEGQR 768
Query: 535 VVLLKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
++ +++ K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+N
Sbjct: 769 SYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLN 828
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
VA+TRA+ ++ + + +S L+ +F+E
Sbjct: 829 VALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKE 862
>gi|148696866|gb|EDL28813.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Mus musculus]
Length = 1131
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 228/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 483 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 541
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 542 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 590
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 591 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 645
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 646 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 705
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 706 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 763
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 764 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 823
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 824 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 883
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 884 IIVGNPKALSKQPLWNHLLSYYKEQKALVEG 914
>gi|388852346|emb|CCF53961.1| probable NAM7-nonsense-mediated mRNA decay protein [Ustilago
hordei]
Length = 1091
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/444 (33%), Positives = 231/444 (52%), Gaps = 36/444 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+HSQ +A+ K++ K + ++ GPPGTGKT T I+ Q K +L CA SN+AVD
Sbjct: 483 LNHSQVNAV-KSVLQKPLSLIQGPPGTGKTVTSATIVYQLSKMNPGAVLVCAPSNVAVDQ 541
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + L+S + L ++ +D E++ KL++
Sbjct: 542 LCEKIHLTGLKVVRLSAKSR---EALDSPISFLTLHEQVAN--NDTHIELQ----KLIQL 592
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDL 372
K++ Q EL S +ERK + L +++ ADV+ T G +L F
Sbjct: 593 KNE------QGELS--SSDERKYKALTRACEKEILSTADVICCTCVGCGDPRLSKIKFRT 644
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V++DEA QA E I L+ G + + GDHLQL P + + +A + GL ++LFERL L
Sbjct: 645 VLVDEATQAAEPEVMIPLVMGCKQVVFVGDHLQLGPVIMNKKAARAGLSQSLFERLIMLG 704
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK---AHPSGVKRTSSTE---PTLLLIDIA 485
+ L VQYRMH + + S Y ++ P ++R P L +
Sbjct: 705 NRPIR--LQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRREVDFPWPVPWLPMFFFQ 762
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA R ++GV S IGI+TPY Q V +++
Sbjct: 763 NLGQEEISSSGTSFLNRTEASNVEKIVTRFFKAGVKPSQIGIVTPYEGQRSYIVNHMQLH 822
Query: 542 RS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S K + K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRAR
Sbjct: 823 GSLKKELYKQVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVALTRARYGL 882
Query: 601 CLVCDTETVSSDGFLKRLIEYFEE 624
++ + + ++ L+ +++E
Sbjct: 883 VILGNPKVLNKHPLWHYLLVHYKE 906
>gi|48727634|gb|AAT46119.1| RENT1 [Mus musculus]
Length = 1113
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 149/451 (33%), Positives = 225/451 (49%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ L F + GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 465 DLNHSQVYAVKTVLQRPLSF-IQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 523
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 524 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 572
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 573 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 627
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 628 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 687
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 688 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 745
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 746 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 805
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 806 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 865
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 866 IIVGNPKALSKQPLWNHLLSYYKEQKALVEG 896
>gi|170784813|ref|NP_001116301.1| regulator of nonsense transcripts 1 isoform a [Mus musculus]
gi|150387852|sp|Q9EPU0.2|RENT1_MOUSE RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase RENT1; AltName:
Full=Nonsense mRNA reducing factor 1; Short=NORF1;
AltName: Full=Up-frameshift suppressor 1 homolog;
Short=mUpf1
gi|33989570|gb|AAH56442.1| Upf1 protein [Mus musculus]
Length = 1124
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 228/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 476 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 534
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 535 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 583
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 584 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 638
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 639 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 698
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 699 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 756
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 757 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 816
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 817 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 876
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 877 IIVGNPKALSKQPLWNHLLSYYKEQKALVEG 907
>gi|354473860|ref|XP_003499150.1| PREDICTED: regulator of nonsense transcripts 1-like [Cricetulus
griseus]
Length = 1061
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 227/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 413 DLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 471
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 472 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 520
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 521 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 575
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 576 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 635
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 636 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 693
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 694 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 753
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 754 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 813
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 814 IIVGNPKALSKQPLWNHLLSYYKEQKALVEG 844
>gi|392333562|ref|XP_003752928.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Rattus norvegicus]
gi|392353859|ref|XP_003751614.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Rattus norvegicus]
Length = 1124
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 228/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 476 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 534
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 535 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 583
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 584 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 638
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 639 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 698
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 699 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 756
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 757 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 816
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 817 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 876
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 877 IIVGNPKALSKQPLWNHLLSYYKEQKALVEG 907
>gi|378734810|gb|EHY61269.1| regulator-nonsense transcripts 1 [Exophiala dermatitidis
NIH/UT8656]
Length = 1076
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 151/453 (33%), Positives = 234/453 (51%), Gaps = 44/453 (9%)
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASN 250
P +L+ SQ +A+ K++ K + ++ GPPGTGKT T II K G ++L CA SN
Sbjct: 435 PGLPDLNSSQINAV-KSVLQKPLSLIQGPPGTGKTVTSATIIYHLSKINGGQVLVCAPSN 493
Query: 251 IAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG 310
+AVD + ER+ ++ VR+ +R + +ES++ SL +R M N
Sbjct: 494 VAVDQLCERIHRTGLKTVRVTAKSR---EDVESSVSFL-------SLHEQVR--MNDSNV 541
Query: 311 KLLKTKDKNTRREIQKELRTLSKEERKRQQ----LAVTDVIKNADVVLTTLTGAVSRKLD 366
+L K +++ EL LS ++ K+ + A +++ NADV+ T GA +L
Sbjct: 542 ELAKLN------QLKSELGELSSQDEKKYKSLTRAAEREILTNADVICCTCVGAGDPRLA 595
Query: 367 NTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFE 425
F V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFE
Sbjct: 596 KFKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFE 655
Query: 426 RLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTL-LLIDI 484
RL L + L VQYRMH + + S Y ++ +GV P + +
Sbjct: 656 RLVILGCAPIR--LNVQYRMHPCLSEFPSNMFYEGSLQ---NGVTMQDRLRPDVDFPWPV 710
Query: 485 AGCDM--------EEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-V 535
A M EE S +N EA R ++GVH IG+ITPY Q
Sbjct: 711 ADSPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVHPQSIGVITPYEGQRS 770
Query: 536 VLLKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNV 591
++ +++ K + K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NV
Sbjct: 771 FIVSSMQTNGTFKKELYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNV 830
Query: 592 AVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
A+TRA+ ++ + + +S L+ +F+E
Sbjct: 831 ALTRAKYGLVILGNPKVLSKHPLWHYLLLHFKE 863
>gi|358412841|ref|XP_001789963.2| PREDICTED: regulator of nonsense transcripts 1 [Bos taurus]
Length = 1063
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 227/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 415 DLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 473
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 474 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 522
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 523 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 577
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 578 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 637
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 638 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 695
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 696 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 755
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 756 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 815
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 816 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 846
>gi|297476262|ref|XP_002688572.1| PREDICTED: regulator of nonsense transcripts 1 [Bos taurus]
gi|296486196|tpg|DAA28309.1| TPA: UPF1 regulator of nonsense transcripts homolog [Bos taurus]
Length = 1116
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 227/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 468 DLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 526
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 527 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 575
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 576 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 630
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 631 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 690
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 691 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 748
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 749 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 808
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 809 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 868
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 869 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 899
>gi|73986070|ref|XP_533868.2| PREDICTED: regulator of nonsense transcripts 1 [Canis lupus
familiaris]
Length = 1119
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 227/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 471 DLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 529
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 530 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 578
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 579 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 633
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 634 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 693
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 694 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 751
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 752 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 811
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 812 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 871
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 872 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 902
>gi|148223321|ref|NP_001085862.1| MGC80941 protein [Xenopus laevis]
gi|49116641|gb|AAH73441.1| MGC80941 protein [Xenopus laevis]
Length = 1098
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 229/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 449 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 507
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR--KEMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR + M L KL
Sbjct: 508 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMESMPELQ-KL 556
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 557 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 611
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 612 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 671
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 672 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 729
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 730 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 789
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 790 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 849
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 850 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 880
>gi|358055738|dbj|GAA98083.1| hypothetical protein E5Q_04765 [Mixia osmundae IAM 14324]
Length = 1047
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 156/471 (33%), Positives = 247/471 (52%), Gaps = 41/471 (8%)
Query: 181 PTVLKKDIAFK---PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII--LQ 235
PTVL+ + + P +L+HSQ A+ K++ K + ++ GPPGTGKT T I+ L
Sbjct: 440 PTVLRTPMPKRVSAPNLPDLNHSQVYAV-KSVLQKPLSLIQGPPGTGKTVTSASIVYHLA 498
Query: 236 EVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNS 295
+ +G ++L A SN+AVD + E++ +++VR+ +R + LES++ L +
Sbjct: 499 TMSQG-QVLVTAPSNVAVDQLTEKIHTTGLKVVRITAKSR---EALESSISHLTLHEQVA 554
Query: 296 SLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADV 352
+ +D E++ KL++ K + Q EL S +ERK + L +++ NADV
Sbjct: 555 N--NDTHVELQ----KLIQLKTE------QGELS--SSDERKFKSLTRACEREILTNADV 600
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQS 411
+ T G +L F V+IDEA QA E C I L G + ++ GDH QL PT+ S
Sbjct: 601 ICCTCVGCGDPRLSKIKFRTVLIDEATQATEPECMIPLTFGVKQLVMVGDHSQLGPTIMS 660
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK---AHPSG 468
+A + GL ++LFERL L G+ L VQYRMH + + S Y ++ P
Sbjct: 661 KKAARAGLTQSLFERLV-LLGNRPIR-LQVQYRMHPCLSEFPSNMFYEGSLQNGVTAPER 718
Query: 469 VKRT---SSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDI 525
+K+ +PT + EE S +N EA RL +SGV I
Sbjct: 719 IKKNVDFPWPQPTTPMYFHQNLGQEEISSSGTSFLNRTEAANVEKVVTRLFKSGVMPHQI 778
Query: 526 GIITPYAAQVVLLK--ILRS---KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEV 580
GI+TPY Q + +L + K + K++EV++VD FQGREK+ I++S VRSN + +
Sbjct: 779 GIVTPYEGQRAYIANYMLFNGSLKKELYKDIEVASVDAFQGREKDYILLSCVRSNEHQGI 838
Query: 581 GFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
GFL+D RR+NVA+TRA+ ++ + + +S L+ +++E + G
Sbjct: 839 GFLNDPRRLNVALTRAKYGLVILGNPKVLSKHALWHYLLTHYKEKGCLVEG 889
>gi|403303596|ref|XP_003942412.1| PREDICTED: regulator of nonsense transcripts 1 [Saimiri boliviensis
boliviensis]
Length = 1257
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 227/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 609 DLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 667
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 668 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 716
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 717 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 771
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 772 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 831
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 832 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 889
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 890 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 949
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 950 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 1009
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 1010 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 1040
>gi|344283632|ref|XP_003413575.1| PREDICTED: regulator of nonsense transcripts 1-like [Loxodonta
africana]
Length = 1117
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 227/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 469 DLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 527
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 528 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 576
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 577 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 631
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 632 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 691
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 692 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 749
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 750 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 809
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 810 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 869
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 870 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 900
>gi|441628692|ref|XP_004089387.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
[Nomascus leucogenys]
Length = 1163
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 227/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 515 DLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 573
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 574 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 622
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 623 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 677
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 678 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 737
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 738 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 795
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 796 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 855
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 856 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 915
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 916 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 946
>gi|40788920|dbj|BAA19664.2| KIAA0221 [Homo sapiens]
Length = 1151
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 227/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 503 DLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 561
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 562 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 610
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 611 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 665
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 666 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 725
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 726 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 783
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 784 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 843
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 844 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 903
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 904 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 934
>gi|426387932|ref|XP_004060416.1| PREDICTED: regulator of nonsense transcripts 1 [Gorilla gorilla
gorilla]
Length = 1055
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 227/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 407 DLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 465
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 466 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 514
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 515 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 569
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 570 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 629
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 630 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 687
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 688 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 747
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 748 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 807
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 808 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 838
>gi|74201543|dbj|BAE28409.1| unnamed protein product [Mus musculus]
Length = 1124
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 228/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 476 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 534
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 535 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 583
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 584 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAEMQFRS 638
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 639 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 698
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 699 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 756
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 757 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 816
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 817 GSLYTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 876
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 877 IIVGNPKALSKQPLWNHLLSYYKEQKALVEG 907
>gi|334326682|ref|XP_003340788.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Monodelphis domestica]
Length = 1122
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 228/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 474 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 532
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 533 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 581
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 582 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 636
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 637 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 696
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 697 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 754
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 755 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 814
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 815 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 874
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 875 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 905
>gi|431922030|gb|ELK19203.1| Regulator of nonsense transcripts 1 [Pteropus alecto]
Length = 1087
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 229/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 439 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 497
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 498 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 546
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 547 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 601
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 602 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 661
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + +R +P +
Sbjct: 662 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAAERVKKGFDFQWPQPDKPMFFYV 719
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 720 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 779
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 780 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 839
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 840 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 870
>gi|403412933|emb|CCL99633.1| predicted protein [Fibroporia radiculosa]
Length = 1074
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 149/466 (31%), Positives = 236/466 (50%), Gaps = 39/466 (8%)
Query: 178 EQKPTVLKKDIAFK---PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIIL 234
E +P VL+ + + P L+HSQ A+ K++ K + ++ GPPGTGKT T +
Sbjct: 419 ELEPQVLRTHMPKRFSAPGLPELNHSQMYAV-KSVLQKPISLIQGPPGTGKTVTSASTVY 477
Query: 235 QEVKRG-SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGD 293
K ++L CA SN+AVD + E++ +++VRL +R + L+S++ L
Sbjct: 478 HLAKMNPGQVLVCAPSNVAVDQLTEKIHATGLKVVRLTAKSR---EALDSSVSFLTLHQQ 534
Query: 294 NSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQL---AVTDVIKNA 350
++ + + + KL++ K++ Q EL S +ERK + L +++ A
Sbjct: 535 VANYTTHVELQ------KLIQLKNE------QGELS--SNDERKYKALIRQCEKEILSAA 580
Query: 351 DVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTV 409
DV+ T GA +L F V+IDEA QA E C I L+ G + +L GDH QL P +
Sbjct: 581 DVICCTCVGAGDPRLSKLKFRTVLIDEATQAAEPECMIPLVLGCKQVVLVGDHQQLGPVI 640
Query: 410 QSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGV 469
+ +A + GL ++LFERL L + L VQYRMH + + S Y ++ +
Sbjct: 641 MNKKAARAGLTQSLFERLVVLGNRPI--RLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAP 698
Query: 470 KRTSSTE------PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHAS 523
+R P + EE S +N EA + +SGV S
Sbjct: 699 ERLRKNVDFPWPVPDTPMFFYQNLGQEEISSSGTSFLNRTEASNVEKIVTKFFKSGVVPS 758
Query: 524 DIGIITPYAAQ----VVLLKILRS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK 578
IG++TPY Q V ++ S K D K +EV++VD FQGREK+ II+S VRSN +
Sbjct: 759 QIGVVTPYEGQRSYIVNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQ 818
Query: 579 EVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+GFL+D RR+NVA+TRA+ ++ + + +S L+ +++E
Sbjct: 819 GIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWHYLLTHYKE 864
>gi|405953739|gb|EKC21342.1| Regulator of nonsense transcripts 1 [Crassostrea gigas]
Length = 1108
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 151/454 (33%), Positives = 232/454 (51%), Gaps = 42/454 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVDN 255
L+HSQ A+ L + + ++ GPPGTGKT T I+ VK+ + ++L CA SNIAVD
Sbjct: 454 LNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLVKQNNGQVLVCAPSNIAVDQ 512
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLAS--DIRK--EMKALNGK 311
+ E++ +++VRL +R + ++S + L ++ S +++K ++K G+
Sbjct: 513 LTEKIHKTGLKVVRLCAKSR---EAIDSPVSFLALHNQIRNMESVPELQKLQQLKDETGE 569
Query: 312 LLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
L T +K R+L K+ K +++++ADV+ T G +L F
Sbjct: 570 LSSTDEK--------RYRSLKKQCEK-------ELLQHADVICCTCVGTGDPRLAKMQFR 614
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ QA E C I ++ G R IL GDH QL P V +A + GL ++LFERL L
Sbjct: 615 SVLIDESTQATEPECMIPVVLGCRQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 674
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK--AHPSGVKRTSSTEP------TLLLI 482
+ L VQYRMH + + S Y ++ P R P +
Sbjct: 675 GIRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVAPGDRVRKGLDIPWPQGDKPMFFY 732
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLL 538
+G EE S +N EA A R ++S V IGIITPY Q V +
Sbjct: 733 TTSG--QEEISSSGTSYLNRTEAANVEKIATRFLRSNVKPEQIGIITPYEGQRAYIVQYM 790
Query: 539 KILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
+ S + KL + +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRA+
Sbjct: 791 QYSGSLNKKLYQEIEVASVDAFQGREKDFIILSCVRSNEHQGIGFLNDPRRLNVALTRAK 850
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 851 YGIIIVGNPKVLSKQPLWNHLLTYYKEQKCLVEG 884
>gi|417413396|gb|JAA53027.1| Putative dna replication helicase, partial [Desmodus rotundus]
Length = 1052
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 228/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 404 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 462
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 463 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 511
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 512 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 566
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 567 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 626
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 627 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 684
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 685 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 744
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 745 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 804
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 805 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 835
>gi|399218547|emb|CCF75434.1| unnamed protein product [Babesia microti strain RI]
Length = 889
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 207/416 (49%), Gaps = 59/416 (14%)
Query: 198 DHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIV 257
D QK+AI A+ SK+ + GPPGTGKTTT+ E+I Q V G +L SN AVD I
Sbjct: 180 DKYQKEAIEHAIKSKDFACIWGPPGTGKTTTLSELIHQLVISGETVLVSCPSNFAVDLIY 239
Query: 258 ERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKD 317
+ V V VR+G A + KE++ + K+
Sbjct: 240 SKTVSIGVSCVRVGRGA--------------------------VIKELQLKMATIESLKN 273
Query: 318 KNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNT-----SFDL 372
T L T KR QL +K A + TT G S+++ N FD
Sbjct: 274 FYTENSYSTILNTNQGSYSKRMQL-----LKKARAIFTTCLGTSSKEIQNFINKYRKFDT 328
Query: 373 VIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
+IIDE+ +LE C+I +L G R + AGDH QLPP V+S + ++ ERL L
Sbjct: 329 LIIDESGNSLESTCYIGMLTGVKRVVFAGDHFQLPPIVKS-----RIKTSSILERLY-LS 382
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTE------PTLLLIDIA 485
ML QYRM++ I+ WS+ Q Y++K+++ S VK + E P L+ +I
Sbjct: 383 CPNSFVMLKRQYRMNQQIVKWSNNQFYSNKLES-DSSVKNSVLNERMVDFYPPLIWYEIE 441
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQS--GVHASDIGIITPYAAQVVLLKILRS 543
G MEE + S N+ EA + + K +I S G+H I +ITPY AQ LL+ L
Sbjct: 442 G--MEEF--DSGSIFNKLEASYVLDYVK-IISSTAGIHPECITVITPYRAQARLLQELIG 496
Query: 544 KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 599
N+ +S++D QG E + +I S+V NS+ +GFLSD RRMNVA+TR +R
Sbjct: 497 VTT--HNLRISSIDASQGFESDVVIFSLVSCNSEGNIGFLSDYRRMNVAITRGKRH 550
>gi|410950946|ref|XP_003982163.1| PREDICTED: regulator of nonsense transcripts 1 [Felis catus]
Length = 1055
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 227/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 407 DLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 465
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 466 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 514
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 515 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 569
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 570 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 629
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 630 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 687
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 688 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 747
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 748 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 807
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 808 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 838
>gi|395847959|ref|XP_003796631.1| PREDICTED: regulator of nonsense transcripts 1 [Otolemur garnettii]
Length = 1118
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 228/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 470 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 528
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 529 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 577
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 578 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 632
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 633 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 692
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 693 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 750
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 751 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 810
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 811 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 870
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 871 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 901
>gi|363743891|ref|XP_418237.3| PREDICTED: regulator of nonsense transcripts 1 [Gallus gallus]
Length = 1096
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 227/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 448 DLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 506
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 507 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 555
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 556 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 610
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 611 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 670
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 671 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 728
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 729 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 788
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 789 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 848
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 849 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 879
>gi|18375673|ref|NP_002902.2| regulator of nonsense transcripts 1 [Homo sapiens]
gi|2739355|gb|AAB94785.1| pNORF1 [Homo sapiens]
gi|3328175|gb|AAC26788.1| nonsense-mediated mRNA decay trans-acting factor [Homo sapiens]
gi|24981038|gb|AAH39817.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Homo
sapiens]
gi|119605145|gb|EAW84739.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|119605146|gb|EAW84740.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|119605148|gb|EAW84742.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|383420499|gb|AFH33463.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|383420501|gb|AFH33464.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|387540714|gb|AFJ70984.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|410220482|gb|JAA07460.1| UPF1 regulator of nonsense transcripts homolog [Pan troglodytes]
gi|410307484|gb|JAA32342.1| UPF1 regulator of nonsense transcripts homolog [Pan troglodytes]
Length = 1118
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 228/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 470 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 528
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 529 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 577
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 578 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 632
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 633 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 692
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 693 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 750
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 751 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 810
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 811 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 870
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 871 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 901
>gi|384939998|gb|AFI33604.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|384940000|gb|AFI33605.1| regulator of nonsense transcripts 1 [Macaca mulatta]
Length = 1118
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 228/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 470 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 528
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 529 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 577
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 578 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 632
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 633 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 692
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 693 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 750
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 751 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 810
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 811 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 870
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 871 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 901
>gi|365759093|gb|EHN00906.1| Nam7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1033
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 174/560 (31%), Positives = 274/560 (48%), Gaps = 71/560 (12%)
Query: 110 GQGVVYRLKDSSITVAFDDI-----------PEEGLNSPLRLEKLANEVTYRRMKDALIQ 158
G+G + RL +S F D P L + E + +Y RM+DAL +
Sbjct: 375 GRGYIVRLPNS-----FQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKK 429
Query: 159 LSKGVQNGPAAGLIPV-LFGEQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSK 212
+ + +G + + G Q + L K+ + F + L+ SQ +A+S L +
Sbjct: 430 FA--IDKKSISGYLYYKILGHQVVDISFDVPLPKEFSIPNF-AQLNSSQSNAVSHVLQ-R 485
Query: 213 NVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLG 271
+ ++ GPPGTGKT T I+ K +IL CA SN+AVD++ +L +++VRL
Sbjct: 486 PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLT 545
Query: 272 HPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTL 331
+R + +ES++ N +L + + + K LLK KD E+ L
Sbjct: 546 AKSR---EDVESSVS-------NLALHNLVGRGAKGELKNLLKLKD---------EVGEL 586
Query: 332 SKEERKRQQLAV----TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACW 387
S + KR V +++ ADVV T GA ++LD T F V+IDE+ QA E C
Sbjct: 587 SASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRLD-TKFRTVLIDESTQASEPECL 645
Query: 388 IALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMH 446
I ++KG++ IL GDH QL P + +A GL ++LFERL L V L VQYRM+
Sbjct: 646 IPIVKGAKQAILVGDHQQLGPVILERKAADAGLKQSLFERLISL--GHVPIRLEVQYRMN 703
Query: 447 EHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT---------LLLIDIAGCDMEEKKDEED 497
++ + S Y ++ +GV T P + ++ A EE
Sbjct: 704 PYLSEFPSNMFYEGSLQ---NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGT 760
Query: 498 STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILR---SKDDKLK-NME 552
S +N EA +L + GV IG+ITPY Q +L+ ++ S D L N+E
Sbjct: 761 SFLNRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYINVE 820
Query: 553 VSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSD 612
V++VD FQGREK+ II+S VR+N ++ +GFL D RR+NV +TRA+ ++ + +++ +
Sbjct: 821 VASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARN 880
Query: 613 GFLKRLIEYFEEHAEYLSGS 632
L+ +F E + G+
Sbjct: 881 TLWNHLLIHFREKGCLVEGT 900
>gi|387017334|gb|AFJ50785.1| Regulator of nonsense transcripts 1-like [Crotalus adamanteus]
Length = 1131
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 227/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 484 DLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 542
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 543 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 591
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 592 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 646
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 647 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 706
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 707 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 764
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 765 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 824
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 825 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 884
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 885 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 915
>gi|406607433|emb|CCH41224.1| ATP-dependent helicase NAM7 [Wickerhamomyces ciferrii]
Length = 1038
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 157/465 (33%), Positives = 244/465 (52%), Gaps = 55/465 (11%)
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII--LQEVKRGSKILACAAS 249
P + L+ SQ A+ L K + ++ GPPGTGKT T II L + + +IL CA S
Sbjct: 444 PGFAELNVSQASAVKNVLQ-KPLSLIQGPPGTGKTVTSATIIHHLTNLNK-DRILVCAPS 501
Query: 250 NIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALN 309
N+AVD++ +L ++++RL +R + +ES++ + SL++ I+K K
Sbjct: 502 NVAVDHLASKLDQLGLKVIRLTAKSR---EDVESSVQ-------HLSLSNIIQKSAKGQL 551
Query: 310 GKLLKTKDKNTRREIQKELRTLSKEE--------RKRQQLAVTDVIKNADVVLTTLTGAV 361
KLL+ ++ EL LS E+ RK+++ ++K ADVV T GA
Sbjct: 552 KKLLR---------LRNELGELSAEDTKTYFTLLRKKEK----SILKQADVVCATCVGAG 598
Query: 362 SRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLG 420
R+L+N +F ++IDE+ QA E C I L+ G++ IL GDH QL P + +A GL
Sbjct: 599 DRRLENVNFRTILIDESTQASEPECLIPLVHGAKQVILVGDHQQLGPVILDKKAGDAGLK 658
Query: 421 RTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT-- 478
++LFERL L V L VQYRM+ + +SS Y+ ++ +GV + P
Sbjct: 659 QSLFERLVVL--GHVPIRLEVQYRMNPCLSEFSSNMFYDGSLQ---NGVTKEQRQLPNSA 713
Query: 479 --LLLIDI-----AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPY 531
++D A EE S +N EA RL + GV IG+ITPY
Sbjct: 714 FPWPVVDTPMMFWANFGREEISGSGTSFLNRIEAMNCERIITRLFRDGVQPEQIGVITPY 773
Query: 532 AAQ----VVLLKILRSKD-DKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR 586
Q V +++ S D D ++EV++VD FQGREK+ II+S VR+N ++ +GFLSD
Sbjct: 774 EGQRAYVVQYMQMNGSMDKDLYMDVEVASVDAFQGREKDFIILSCVRANDQQNIGFLSDP 833
Query: 587 RRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
RR+NVA+TRA+ ++ + +S + +L+ ++ E + G
Sbjct: 834 RRLNVALTRAKYGVVILGNPRALSKNQLWNQLLLHYREKGCLVEG 878
>gi|444726614|gb|ELW67138.1| Regulator of nonsense transcripts 1 [Tupaia chinensis]
Length = 1000
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 189/644 (29%), Positives = 301/644 (46%), Gaps = 72/644 (11%)
Query: 17 EFVSVMAPLIDLE-------KEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLM 69
++ ++ PL+ LE KE++ +IT L+ KK L D+ LM
Sbjct: 259 QYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN---KKRIAYFTLPKTDSDMRLM 315
Query: 70 --GKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L + KGD+ P K G V+ + N D + L+ SS+ +
Sbjct: 316 QGDEICLRY---KGDLAPLWK-GIGHVIKVPDNYGD--------EIAIELR-SSVGAPVE 362
Query: 128 DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKK 186
+ +++ + ++ RM+ AL + V +G I L G + V+ K
Sbjct: 363 ------VTHNFQVDFVWKSTSFDRMQSALKTFA--VDETSVSGYIYHKLLGHEGEDVIIK 414
Query: 187 DIAFKPFNS----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS- 241
K F + +L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+
Sbjct: 415 CQLPKRFTAQGLPDLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNG 473
Query: 242 KILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDI 301
+L CA SNIAVD + E++ +++VRL +R A+D+ V +L + I
Sbjct: 474 PVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQI 523
Query: 302 RK--EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
R M L KL + KD+ E K R ++ A +++ NADV+ T G
Sbjct: 524 RNMDSMPELQ-KLQQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVG 577
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKG 418
A +L F ++IDE+ QA E C + ++ G++ IL GDH QL P V +A K G
Sbjct: 578 AGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAG 637
Query: 419 LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---- 474
L ++LFERL L + L VQYRMH + + S Y ++ + R
Sbjct: 638 LSQSLFERLVVLGIRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDF 695
Query: 475 --TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYA 532
+P + EE S +N EA +L+++G IGIITPY
Sbjct: 696 QWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYE 755
Query: 533 AQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
Q V ++ S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D R
Sbjct: 756 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPR 815
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
R+NVA+TRAR +V + + +S L+ Y++E + G
Sbjct: 816 RLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 859
>gi|393219539|gb|EJD05026.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 791
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 158/496 (31%), Positives = 243/496 (48%), Gaps = 75/496 (15%)
Query: 176 FGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVE---I 232
+ + P V++ D P N +L+ SQ A++ + + + ++ GPPGTGKT T+VE +
Sbjct: 240 YRQPDPVVVEGD---PPLN-HLNASQIRAMAMMIGER-ISLIQGPPGTGKTKTIVETVKL 294
Query: 233 ILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQV--- 289
+ + IL C +N+A+DN++E ++ +R+G+ P++ E D Q
Sbjct: 295 LKGHFEVPHPILVCTFTNVAIDNLLEGFANGGLKPLRVGNEGSAKPELQEYMFDEQFDGH 354
Query: 290 ---------LRGDNSSLASDIRK---EMKALNGKLLKT---KDKNTRREI-QKELRTLSK 333
L + L S IRK ++KAL + K +N + ++ +K R+
Sbjct: 355 PKKAAELDPLIKEYEELDSRIRKLRKDIKALEDEKPTNWIEKRENMKLDMDRKSYRSYIL 414
Query: 334 EERKR--QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL 391
+ R R ++ D+ ADV+ TT + S L F +V +DEA+ + E A I L+
Sbjct: 415 KARARLLRESIFYDICTKADVICTTSIRSASYYLQTMDFPVVFLDEASMSTEPASLIPLM 474
Query: 392 KGSRCI-LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIM 450
KG + + L GDH QLPP V S +A++ L +LFERL GD + ML VQYRMH I
Sbjct: 475 KGCKHLALIGDHKQLPPVVVSRDAQQGELDVSLFERLIS-EGDVPSVMLDVQYRMHPGIS 533
Query: 451 NWSSKQLYN----------------------SKIKAHPSGVKRTSSTEPTLLLIDIAGCD 488
+ S + Y+ S + AHP R P+++ ID G
Sbjct: 534 KFPSMEFYDTMLLDGTVHAGEVIPSLMPLSSSHLVAHPETGHR-----PSVIFIDHEGP- 587
Query: 489 MEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKL 548
E K EG ++ + + DIG+I PY +Q+ LL L KDD++
Sbjct: 588 -EATKSRSRVNWTEGYIICSIVEDLLRLNPDLLGEDIGVIAPYKSQMNLLTRLLKKDDEV 646
Query: 549 K---------------NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAV 593
+ N+EV TVDGF+GREK+AII S VR+N +GFL+DRRR+NV +
Sbjct: 647 RDHFKAHLGDRALEVPNIEVKTVDGFEGREKQAIIFSTVRNNQFGHIGFLADRRRLNVGL 706
Query: 594 TRARRQCCLVCDTETV 609
TRA+R +V T+
Sbjct: 707 TRAKRALFVVGSMSTL 722
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 8/150 (5%)
Query: 15 LQEFVSVMAPLIDLEKEAE---ISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGK 71
+Q + S PLI E+EAE I +++ + R L +++G + +LK +
Sbjct: 10 IQAYKSRFEPLIHAEQEAEEEVIKRRLSTWSLRRL---KEEGYCMTDLKGFWLLKSKDDR 66
Query: 72 TLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPE 131
++ F+ + G LP H F V + ++ D +G V ++K I +AFD+ +
Sbjct: 67 SVAGFRLSPGVSLPPHVFTYGSQVFV--SRLDPLKDEPRRGSVVKVKPEQIDLAFDETFD 124
Query: 132 EGLNSPLRLEKLANEVTYRRMKDALIQLSK 161
+ RL+ + + ++RM DA+ +L+K
Sbjct: 125 DLPKDFWRLDLGTSNIAFQRMYDAINKLAK 154
>gi|149639074|ref|XP_001514946.1| PREDICTED: regulator of nonsense transcripts 1 [Ornithorhynchus
anatinus]
Length = 1113
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 227/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 467 DLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 525
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 526 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 574
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 575 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 629
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 630 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 689
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 690 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 747
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 748 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 807
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 808 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 867
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 868 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 898
>gi|397493981|ref|XP_003817874.1| PREDICTED: regulator of nonsense transcripts 1 [Pan paniscus]
Length = 1053
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 227/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 405 DLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 463
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 464 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 512
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 513 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 567
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 568 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 627
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 628 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 685
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 686 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 745
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 746 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 805
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 806 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 836
>gi|194223788|ref|XP_001915294.1| PREDICTED: regulator of nonsense transcripts 1 [Equus caballus]
Length = 1079
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 228/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 431 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 489
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 490 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 538
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 539 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 593
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 594 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 653
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 654 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 711
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 712 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 771
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 772 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 831
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 832 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 862
>gi|126030570|pdb|2GJK|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030579|pdb|2GK6|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030580|pdb|2GK6|B Chain B, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030581|pdb|2GK7|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
Length = 624
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 190/644 (29%), Positives = 299/644 (46%), Gaps = 72/644 (11%)
Query: 17 EFVSVMAPLIDLE-------KEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLM 69
++ ++ PL+ LE KE++ +IT L+ KK L D+ LM
Sbjct: 11 QYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN---KKRIAYFTLPKTDSDMRLM 67
Query: 70 --GKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L + KGD+ P K G V+ + N D + L+ S
Sbjct: 68 QGDEICLRY---KGDLAPLWK-GIGHVIKVPDNYGD--------EIAIELRSSV------ 109
Query: 128 DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKK 186
P E + +++ + ++ RM+ AL + V +G I L G + V+ K
Sbjct: 110 GAPVE-VTHNFQVDFVWKSTSFDRMQSALKTFA--VDETSVSGYIYHKLLGHEVEDVIIK 166
Query: 187 DIAFKPFNS----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS- 241
K F + +L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+
Sbjct: 167 CQLPKRFTAQGLPDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNG 225
Query: 242 KILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDI 301
+L CA SNIAVD + E++ +++VRL +R A+D+ V +L + I
Sbjct: 226 PVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQI 275
Query: 302 RK--EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
R M L KL + KD+ E K R ++ A +++ NADV+ T G
Sbjct: 276 RNMDSMPELQ-KLQQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVG 329
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKG 418
A +L F ++IDE+ QA E C + ++ G++ IL GDH QL P V +A K G
Sbjct: 330 AGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAG 389
Query: 419 LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---- 474
L ++LFERL L + L VQYRMH + + S Y ++ + R
Sbjct: 390 LSQSLFERLVVLGIRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDF 447
Query: 475 --TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYA 532
+P + EE S +N EA +L+++G IGIITPY
Sbjct: 448 QWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYE 507
Query: 533 AQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
Q V ++ S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D R
Sbjct: 508 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPR 567
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
R+NVA+TRAR +V + + +S L+ Y++E + G
Sbjct: 568 RLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 611
>gi|281343547|gb|EFB19131.1| hypothetical protein PANDA_000565 [Ailuropoda melanoleuca]
Length = 1122
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 227/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 474 DLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 532
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 533 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 581
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 582 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 636
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 637 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 696
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 697 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 754
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 755 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 814
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 815 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 874
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 875 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 905
>gi|380800401|gb|AFE72076.1| regulator of nonsense transcripts 1, partial [Macaca mulatta]
gi|380800403|gb|AFE72077.1| regulator of nonsense transcripts 1, partial [Macaca mulatta]
Length = 1064
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 228/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 416 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 474
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 475 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 523
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 524 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 578
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 579 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 638
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 639 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 696
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 697 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 756
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 757 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 816
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 817 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 847
>gi|327200471|pdb|2XZO|A Chain A, Upf1 Helicase - Rna Complex
gi|327200473|pdb|2XZP|A Chain A, Upf1 Helicase
Length = 623
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 190/644 (29%), Positives = 300/644 (46%), Gaps = 72/644 (11%)
Query: 17 EFVSVMAPLIDLE-------KEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLM 69
++ ++ PL+ LE KE++ +IT L+ KK L D+ LM
Sbjct: 10 QYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN---KKRIAYFTLPKTDSDMRLM 66
Query: 70 --GKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L + KGD+ P K G V+ + N D + L+ S
Sbjct: 67 QGDEICLRY---KGDLAPLWK-GIGHVIKVPDNYGD--------EIAIELRSSV------ 108
Query: 128 DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKK 186
P E + +++ + ++ RM+ AL + V +G I L G + V+ K
Sbjct: 109 GAPVE-VTHNFQVDFVWKSTSFDRMQSALKTFA--VDETSVSGYIYHKLLGHEVEDVIIK 165
Query: 187 DIAFKPFNS----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS- 241
K F + +L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+
Sbjct: 166 CQLPKRFTAQGLPDLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNG 224
Query: 242 KILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDI 301
+L CA SNIAVD + E++ +++VRL +R A+D+ V +L + I
Sbjct: 225 PVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQI 274
Query: 302 RK--EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
R M L KL + KD+ E K R ++ A +++ NADV+ T G
Sbjct: 275 RNMDSMPELQ-KLQQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVG 328
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKG 418
A +L F ++IDE+ QA E C + ++ G++ IL GDH QL P V +A K G
Sbjct: 329 AGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAG 388
Query: 419 LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---- 474
L ++LFERL L + L VQYRMH + + S Y ++ + R
Sbjct: 389 LSQSLFERLVVLGIRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDF 446
Query: 475 --TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYA 532
+P + EE S +N EA +L+++G IGIITPY
Sbjct: 447 QWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYE 506
Query: 533 AQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
Q V ++ S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D R
Sbjct: 507 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPR 566
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
R+NVA+TRAR +V + + +S L+ Y++E + G
Sbjct: 567 RLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 610
>gi|355703337|gb|EHH29828.1| hypothetical protein EGK_10343, partial [Macaca mulatta]
Length = 1053
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 228/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 405 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 463
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 464 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 512
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 513 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 567
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 568 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 627
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 628 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 685
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 686 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 745
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 746 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 805
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 806 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 836
>gi|395513182|ref|XP_003760808.1| PREDICTED: regulator of nonsense transcripts 1 [Sarcophilus
harrisii]
Length = 1050
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 227/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 402 DLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 460
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 461 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 509
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 510 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 564
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 565 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 624
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 625 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 682
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 683 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 742
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 743 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 802
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 803 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 833
>gi|17380291|sp|Q92900.2|RENT1_HUMAN RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase RENT1; AltName:
Full=Nonsense mRNA reducing factor 1; Short=NORF1;
AltName: Full=Up-frameshift suppressor 1 homolog;
Short=hUpf1
gi|119605144|gb|EAW84738.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Homo sapiens]
gi|119605147|gb|EAW84741.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Homo sapiens]
Length = 1129
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 228/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 481 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 539
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 540 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 588
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 589 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 643
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 644 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 703
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 704 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 761
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 762 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 821
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 822 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 881
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 882 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 912
>gi|168274489|dbj|BAG09664.1| regulator of nonsense transcripts 1 [synthetic construct]
Length = 1129
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 228/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 481 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 539
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 540 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 588
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 589 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 643
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 644 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 703
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 704 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 761
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 762 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 821
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 822 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 881
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 882 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 912
>gi|402904861|ref|XP_003915257.1| PREDICTED: regulator of nonsense transcripts 1, partial [Papio
anubis]
Length = 1041
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 228/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 393 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 451
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 452 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 500
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 501 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 555
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 556 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 615
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 616 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 673
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 674 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 733
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 734 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 793
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 794 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 824
>gi|296233329|ref|XP_002761973.1| PREDICTED: regulator of nonsense transcripts 1, partial [Callithrix
jacchus]
Length = 1164
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 228/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 516 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 574
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 575 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 623
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 624 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 678
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 679 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 738
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 739 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 796
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 797 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 856
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 857 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 916
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 917 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 947
>gi|300176550|emb|CBK24215.2| unnamed protein product [Blastocystis hominis]
Length = 939
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 185/643 (28%), Positives = 312/643 (48%), Gaps = 68/643 (10%)
Query: 16 QEFVSVMAPLIDLEKEA-EISASI--TSGASRNLDTA--QKKGSTILNLKCVDAQTGL-M 69
+E+ + +PLI L+ EA E++ ++ + S DT Q +T ++ + +D++ + +
Sbjct: 249 EEYSRIFSPLIRLDMEADEVANNLKRITDVSITWDTGIGQSTIATFVHDQ-LDSRYRMNV 307
Query: 70 GKTL-LEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDD 128
G+ + + +++ GD + + V+ + N+ + + + R S+T ++
Sbjct: 308 GQEIVIHYETKVGDTVCEGNYAG-KVIHIDNNRIKVLMKSQEEPPTGRQTGFSVTFCWNA 366
Query: 129 IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDI 188
P + L+ +++ RM D + Q G +P ++ P V K
Sbjct: 367 TPFTRM-----LKAVSSYFNPERMTDFIYQSILGYN-------VP---DKEYPPVYIKSY 411
Query: 189 AFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACA 247
+ F L+ Q DA+ AL+ K++ ++ GPPGTGKT II VK ++L CA
Sbjct: 412 SLPNF-KQLNGFQLDAVKNALN-KHLTLIQGPPGTGKTVVSATIIYHIVKSYKQRVLVCA 469
Query: 248 ASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDA--QVLRGDNSSLASDIRKEM 305
SNIAVDN+ RL HR+ L + RL+ + ES V + + E+
Sbjct: 470 PSNIAVDNLTLRL--HRLGLCVV----RLVARSRESVRSEVENVCLHNLAVYVGGPTSEL 523
Query: 306 KALNGKLLKTKDKNTRREIQKELRTLSKEE----RKRQQLAVTDVIKNADVVLTTLTGAV 361
LN KL +E LS++E + +A ++ +A+VV T + A+
Sbjct: 524 YKLNAKL-------------QENGQLSEKEAALYKSYLTIAEHTILSHAEVVCCTCSAAL 570
Query: 362 SRKLDNTSFDLVIIDEAAQALEIACWIALLKGS-RCILAGDHLQLPPTVQSVEAEKKGLG 420
+L SF V++DE+ QA E C I ++ G R IL GDH QL P +Q EA++
Sbjct: 571 DARLAGLSFPAVLVDESTQAREPECLIPIVNGCDRLILVGDHKQLGPVIQDQEAKRAEFD 630
Query: 421 RTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------ 474
+LFERL L G + L +QYRMH + + S YN +K +RT +
Sbjct: 631 ISLFERLLSL-GIK-PYCLNIQYRMHPALSIFPSNMFYNGALKNAVHSSERTRNLAFPWP 688
Query: 475 -TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAA 533
++ ++ + G E+ S +N EA +R I G+ IG+ITPY +
Sbjct: 689 RSDMPMMFWCVQG--SEDPGSSGRSFLNRMEATCVEKVVERFINCGIPGDRIGVITPYDS 746
Query: 534 QVVLLKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRM 589
Q LL+ + S K +++K +E+++VD FQGRE + II S VRSNS +GFL+D RR+
Sbjct: 747 QRTLLRQVLSRHMEKAEEVKKVEIASVDEFQGRENDYIIFSCVRSNSDGVLGFLNDMRRL 806
Query: 590 NVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
NVA+TRA+ ++ + T+ S L+ +F+ + + G+
Sbjct: 807 NVAITRAKYGIVIIGNPNTLRSHPIWVELMNHFQMNKCLVCGA 849
>gi|297276540|ref|XP_002808229.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Macaca mulatta]
Length = 1096
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 227/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 448 DLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 506
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 507 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 555
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 556 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 610
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 611 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 670
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 671 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 728
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 729 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 788
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 789 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 848
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 849 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 879
>gi|363749513|ref|XP_003644974.1| hypothetical protein Ecym_2426 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888607|gb|AET38157.1| Hypothetical protein Ecym_2426 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1002
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 172/548 (31%), Positives = 276/548 (50%), Gaps = 47/548 (8%)
Query: 110 GQGVVYRLKDS---SITVAFDDI---PEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGV 163
G+G + RL DS T+ P L + E + +Y RM++AL + + V
Sbjct: 323 GRGYILRLPDSFKDEYTLELKSTKSSPPTNLTTGFTAEFVWKGTSYGRMQEALRKFA--V 380
Query: 164 QNGPAAGLIPV-LFGEQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFML 217
+G + + G P + L K+ + F + L+ SQK+AI L + + ++
Sbjct: 381 DKKSISGYLYYKILGHDVPDIEFEVDLPKEFSIPNF-TKLNASQKNAIKHVLQ-RPLSLI 438
Query: 218 HGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARL 276
GPPGTGKT T II K ++L CA SN AVD++ +L +++VRL +R
Sbjct: 439 QGPPGTGKTVTSATIIYHLSKMHKERLLVCAPSNTAVDHLAAKLRDLGLKVVRLTAKSR- 497
Query: 277 LPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEER 336
+ +ES++ + +L + I++ + KLL+ K+ + +E R +K R
Sbjct: 498 --EDVESSVS-------DLALHNLIKRSAQGELKKLLRLKE-DAGELSARETRLFAKLVR 547
Query: 337 KRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR- 395
K + + ++K ADVV T GA ++LD + F V+IDE+ QA E C I ++KG++
Sbjct: 548 KNE----SAILKKADVVCCTCVGAGDKRLD-SKFRTVLIDESTQASEPECLIPVVKGTKQ 602
Query: 396 CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSK 455
IL GDH QL P + +A GL ++LFE+L L V L VQYRM+ ++ + S
Sbjct: 603 VILVGDHQQLGPVILDRKAGNAGLKQSLFEKLVSL--GHVPIRLEVQYRMNPYLSEFPSN 660
Query: 456 QLYNSKIKAHPSGVKRT--SSTEPTLL----LIDIAGCDMEEKKDEEDSTMNEGEAEVAM 509
Y ++ + +RT S+ P + ++ A EE S +N EA
Sbjct: 661 MFYEGTLQNGVTVEQRTILESSFPWPISDIPMMFWANYGREEISANGTSYLNRIEAINCE 720
Query: 510 AHAKRLIQSGVHASDIGIITPYAAQ----VVLLKILRSKD-DKLKNMEVSTVDGFQGREK 564
RL + GV + IG+ITPY Q V +++ S D D +EV +VD FQGREK
Sbjct: 721 RIITRLFKDGVKPAQIGVITPYEGQRAYIVQYMQMNGSMDKDMYMTVEVGSVDAFQGREK 780
Query: 565 EAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+ II+S VR+N + +GFL D RR+NVA+TRA+ ++ + ++ + L+ +F E
Sbjct: 781 DYIILSCVRANDHQSIGFLVDPRRLNVALTRAKYGLAILGNPTSLFRNRLWNHLLIHFRE 840
Query: 625 HAEYLSGS 632
+ G+
Sbjct: 841 KGCLVEGT 848
>gi|241955273|ref|XP_002420357.1| ATP-dependent RNA helicase, putative; atp-dependent helicase, SFI
superfamily, putative [Candida dubliniensis CD36]
gi|223643699|emb|CAX41433.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 1016
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 174/573 (30%), Positives = 273/573 (47%), Gaps = 53/573 (9%)
Query: 88 KFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS---SITVAFDD---IPEEGLNSPLRLE 141
K D ++L+ + G P G G + RL ++ T+ + IP L + E
Sbjct: 326 KVAVGDEIILR-YSGNQGEPWEGHGYILRLPNAYQEEFTLELNPSKIIPPTNLTTDFTAE 384
Query: 142 KLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK---PFNSNLD 198
+ +Y RM+ A+ + ++ + +L E P D+ K P + L+
Sbjct: 385 FVWKGTSYTRMQQAMKDFATDEESVSSFIYHKLLGHEVLPIEFDIDLPKKFSHPKLTELN 444
Query: 199 HSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIV 257
SQ +A+ L + + ++ GPPGTGKT T II K KIL CA SN+AVD++
Sbjct: 445 VSQTNAVRTVLQ-RPLSLIQGPPGTGKTVTSATIIYHLSKLNKQKILVCAPSNVAVDHLA 503
Query: 258 ERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRG-DNSSLASDIRKEMKALN--GKLLK 314
+L +++VRL +R + +ES++ L N++ +++K +K N G+L
Sbjct: 504 AKLDLLGLKVVRLTAKSR---EDVESSVSHLALHNLVNNNAKGELKKLIKLKNQVGEL-S 559
Query: 315 TKDKNTRREIQK--ELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
D N ++ + EL+ L+K E VV T GA R+L F
Sbjct: 560 VGDTNNYLKLSRSSELKILNKSE----------------VVCCTCVGAADRRLSQFKFKT 603
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDE+ QA E I ++KG++ IL GDH QL P + +A GL ++LFERL L
Sbjct: 604 VLIDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILDKKAADAGLKQSLFERLVFL- 662
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR--TSSTEPTLL----LIDIA 485
V L VQYRMH + + S Y ++ + R ST P + ++ A
Sbjct: 663 -GHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFWA 721
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL------- 538
EE +S +N EA +L + G+ IG+ITPY Q L
Sbjct: 722 NYGREELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQIGVITPYEGQRAYLVQFMSVN 781
Query: 539 KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARR 598
L K D+ N+E+++VD FQGREK+ II+S VR+N + +GFLSD RR+NVA+TRA+
Sbjct: 782 STLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALTRAKY 841
Query: 599 QCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
++ + ++ + L+ +F E + G
Sbjct: 842 GLVILGNPRSLCRNRLWNHLLIHFREKGCLVDG 874
>gi|167390586|ref|XP_001739415.1| splicing endonuclease positive effector sen1 [Entamoeba dispar
SAW760]
gi|165896907|gb|EDR24206.1| splicing endonuclease positive effector sen1, putative [Entamoeba
dispar SAW760]
Length = 1156
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 183/559 (32%), Positives = 269/559 (48%), Gaps = 127/559 (22%)
Query: 166 GPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGK 225
P+ G+ FG+ T+ + +I FNS SQ + I+ ALS K ++ GPPGTGK
Sbjct: 267 SPSNGI----FGKYLQTMKETNI----FNS----SQIECINSALSKKGFSLIQGPPGTGK 314
Query: 226 TTTVVEIILQEV--------KRG------SKILACAASNIAVDNIVERLV---------- 261
T T++ I+ + K+G SKIL CA SN AVD IV R+
Sbjct: 315 TKTLLGILGAIIFGKPASINKQGTVKMKHSKILVCAPSNAAVDEIVLRIQNEGILNGNGK 374
Query: 262 PHRVRLVRLGHPARLLPQVLESALDAQV-----LRGDN--------SSLASDIRKEMKAL 308
+V ++R+G+ A + +V E +D + RG N SS + I ++M+AL
Sbjct: 375 KQKVNIIRIGNYAGINSKVNEVLIDTLISNELTKRGFNEQKRTENVSSKIASIEQKMRAL 434
Query: 309 NGKL-----------------LKTKDKNTRREIQKELRTLSKEERKRQQLAVT------- 344
++ K DK R I K +TL + KR VT
Sbjct: 435 TKEIEDTVIALNNEKEKVVSSTKENDKKINR-IHKYTQTLKEMNNKRDAFRVTLQQMKSE 493
Query: 345 -----------------DVIKNADVVLTTLT--------GAVSRKLDNTSFDLVIIDEAA 379
+ + AD++ TL V K++N VI+DEAA
Sbjct: 494 KGKIQREFAKIRKEITKQIFEEADILCCTLNTSGSDIFLNCVKEKIEN-----VIVDEAA 548
Query: 380 QALEIACWIALLKGS-RCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT-S 437
Q++EI+ I L G+ RCIL GD QLP TV SV A+ G R+LFER LY V+
Sbjct: 549 QSVEISTLIPLRFGAERCILIGDPQQLPATVISVAAQNSGYDRSLFER---LYKCGVSVD 605
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKI------KAHPSGVKRTSSTEPTLLLIDIAGCDMEE 491
ML +QYRMH I + SKQ Y+ ++ P + + ++ D G +EE
Sbjct: 606 MLKIQYRMHPLIREFPSKQFYSGELIDGRDESILPCSIDKGFG---PVVFYDACG-GLEE 661
Query: 492 KKDEEDSTMNEGEAEVAMAHAKRLIQS--GVHASDIGIITPYAAQVVLLKILRSKDDKLK 549
+ + + NE E ++ + + LI+ DIGI+TPY Q++L+KI LK
Sbjct: 662 RVGQ--TLANEVEVQIVIGLLEGLIKKYPNCKEWDIGIVTPYRQQLLLIKIAIESSPLLK 719
Query: 550 NME---VSTVDGFQGREKEAIIISMVRSNS-KKEVGFLSDRRRMNVAVTRARRQCCLVCD 605
M V+T+DGFQGRE + II S VRS+ K +GFLSD RRMNVA+TRA+ ++ +
Sbjct: 720 EMSKLCVNTIDGFQGREMDIIIFSCVRSSQIKPSIGFLSDIRRMNVALTRAKNALWVIGN 779
Query: 606 TETVSSDGFLKRLIEYFEE 624
+ T+ ++ K+ IE+ +E
Sbjct: 780 SNTLCTNKTWKQYIEWLKE 798
>gi|190349039|gb|EDK41614.2| hypothetical protein PGUG_05712 [Meyerozyma guilliermondii ATCC
6260]
Length = 949
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 182/586 (31%), Positives = 269/586 (45%), Gaps = 77/586 (13%)
Query: 88 KFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS---SITVAFD---DIPEEGLNSPLRLE 141
K D ++L N D P G G + RL ++ T+ + + P L + E
Sbjct: 270 KVAVGDEIILHYNGGD-REPWQGSGFIVRLPNAYHNEFTLELNPQKNAPPTHLTTNFTAE 328
Query: 142 KLANEVTYRRMKDALIQLSKGVQNGPAAGLI----------PVLFGEQKPTVLKKDIAFK 191
+ +Y RM+ AL S V +G I PV F P L
Sbjct: 329 FVWKGTSYNRMQHAL--KSFAVDEKSVSGYIYHRILGHNVEPVEFSFNLPEKLSI----- 381
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQ---------------- 235
P + L+ SQ++A+ L + + ++ GPPGTGKT T II
Sbjct: 382 PNLTALNESQENAVRTVLQ-RPLSLIQGPPGTGKTFTSATIIYHLRNMINKKPSGKKSSK 440
Query: 236 --EVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGD 293
+ + KIL CA SN+AVD++ E++ V+++RL +R + ES++ L
Sbjct: 441 SKKKQTAEKILVCAPSNVAVDHLAEKIANLGVKVMRLTAKSR---EDAESSVSHLSLH-- 495
Query: 294 NSSLASDIRKEMKALNGKLLKTKDKNTRREIQ-KELRTLSKEERKRQQLAVTDVIKNADV 352
+L K ++ L K KN E+ KE K RK A V+++ +V
Sbjct: 496 --NLIVQTNKRLQKLQDK------KNAEGELSAKEAVEFHKLTRK----AEKSVMEDCEV 543
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS 411
+ +T GA +LD+ F V+IDE+ QA E I ++KG++ IL GDH QL P +
Sbjct: 544 ICSTCVGAGDHRLDSMVFRAVLIDESTQASEPEIMIPIVKGAKQVILVGDHQQLGPVILH 603
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
+A GL ++LFERL L V L VQYRMH + + S Y ++ S R
Sbjct: 604 KKAGDAGLKQSLFERLVVL--GHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVSSESR 661
Query: 472 TSSTE----PTL--LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDI 525
T E P L ++ A EE S +N EA RL + GV A I
Sbjct: 662 TFKNETFPWPVLDFPMMFWANYGREEISASGYSYLNRVEAMNVEKIITRLFKQGVKAEQI 721
Query: 526 GIITPYAAQ-------VVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK 578
G++TPY Q + L L K ++ +EV++VD FQGREK+ II+S VR+N
Sbjct: 722 GVVTPYEGQRAYILQHMSLTGSLVDKREQYSEVEVASVDAFQGREKDYIILSCVRANETH 781
Query: 579 EVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+GFLSD RR+NVA+TRA+ +V + +S + L+ +F E
Sbjct: 782 GIGFLSDSRRLNVALTRAKYGLVIVGNPRCLSKNKLWNHLLIHFRE 827
>gi|323507767|emb|CBQ67638.1| probable NAM7-nonsense-mediated mRNA decay protein [Sporisorium
reilianum SRZ2]
Length = 1094
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 146/444 (32%), Positives = 231/444 (52%), Gaps = 36/444 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+HSQ +A+ K++ K + ++ GPPGTGKT T I+ Q K +L CA SN+AVD
Sbjct: 479 LNHSQVNAV-KSVLQKPLSLIQGPPGTGKTVTSASIVYQLSKMNPGPVLVCAPSNVAVDQ 537
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + L+S + L ++ +D E++ KL++
Sbjct: 538 LTEKIHMTGLKVVRLTAKSR---EALDSPISFLTLHEQVAN--NDTNIELQ----KLIQL 588
Query: 316 KDKNTRREIQKELRTLSKEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
K++ Q EL S +ERK + L +++ ADV+ T G +L F
Sbjct: 589 KNE------QGELS--SSDERKCKALIRACEKEILSTADVICCTCVGCGDPRLAKIKFRT 640
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V++DEA QA E C I L+ G + + GDHLQL P + + + + G ++LFERL L
Sbjct: 641 VLVDEATQAAEPECMIPLVMGCKQVVFVGDHLQLGPVIMNKKVARAGASQSLFERLIMLG 700
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT------SSTEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + +R P+L ++
Sbjct: 701 NRPIR--LQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKDVDFPWPVPSLPMLFFQ 758
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA R ++GV S IGI+TPY Q V +++
Sbjct: 759 NLGQEEISSSGTSFLNRTEASNVEKIVTRFFKAGVKPSQIGIVTPYEGQRSYIVNHMQLH 818
Query: 542 RS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S K + K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRAR
Sbjct: 819 GSLKKELYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVALTRARYGL 878
Query: 601 CLVCDTETVSSDGFLKRLIEYFEE 624
++ + + ++ L+ +++E
Sbjct: 879 VILGNPKVLNKHPLWHYLLVHYKE 902
>gi|254568798|ref|XP_002491509.1| Presumed helicase required for RNA polymerase II transcription
termination and processing of RNAs [Komagataella pastoris
GS115]
gi|238031306|emb|CAY69229.1| Presumed helicase required for RNA polymerase II transcription
termination and processing of RNAs [Komagataella pastoris
GS115]
Length = 2146
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 166/510 (32%), Positives = 251/510 (49%), Gaps = 95/510 (18%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEI-----------------ILQEVKR 239
++ SQ AI+ A +S ++ GPPGTGKT T++ I I V
Sbjct: 1276 VNKSQAQAIAGASTSSGFSLIQGPPGTGKTKTILGIVGKVLTTRNNLHSTPISIPGAVTS 1335
Query: 240 GS--------KILACAASNIAVDNIVERL---VP------HRVRLVRLGHPARLLPQV-- 280
G K+L CA SN AVD +V RL VP + ++VRLG + V
Sbjct: 1336 GPRKPETGVRKVLVCAPSNAAVDELVIRLREGVPGISGQMFKPKVVRLGRSDAINSAVKD 1395
Query: 281 --LESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERK- 337
LE +DA++ + ++ A + ++ + K+L ++N+ RE KE+ L EE K
Sbjct: 1396 LTLEELVDAEL---NETARAPKADQSIREKHNKVLA--ERNSIREALKEVSNLKPEEVKD 1450
Query: 338 ----------------------RQQLAVT-------------DVIKNADVVLTTLTGAVS 362
R++++V+ ++ A ++ +TL+G+
Sbjct: 1451 LQKRYSEITKAKNELGKKLDEQREEVSVSYRNREIQRRAVQFRILSQAQIICSTLSGSAH 1510
Query: 363 RKLD--NTSFDLVIIDEAAQALEIACWIALLKGS-RCILAGDHLQLPPTVQSVEAEKKGL 419
L +TSFD V+IDEA Q +E++ I L G RCI+ GD QLPPTV S A +
Sbjct: 1511 DFLATMDTSFDTVVIDEACQCIELSAIIPLRYGCKRCIMVGDPNQLPPTVLSQAAAEYKY 1570
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSK-IKAHPSGVKRTSSTE-- 476
++LF R+ +++ V +L VQYRMH I + SK+ YN K I + K T S
Sbjct: 1571 EQSLFVRMMNVHPKSVY-LLNVQYRMHPQISVFPSKEFYNGKLIDGEGTETKNTRSWHKK 1629
Query: 477 -PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLI---QSGVHASDIGIITPYA 532
P ID+ G E S N EA+ ++ L+ + AS IG+I+PY
Sbjct: 1630 IPPYCFIDVTG--KESTNTSNKSLFNRAEAQAVVSLIDALLGLDRDFNFASKIGVISPYK 1687
Query: 533 AQVVLLK--ILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
QVVLL+ ILR K + ++V+TVDGFQG+EK+ I+ S VR++ K VGFL+D RR+N
Sbjct: 1688 QQVVLLRDMILR-KFGRNIGIDVNTVDGFQGQEKDVILFSCVRADETKGVGFLADVRRLN 1746
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
VA+TRA+ +V +S + L++
Sbjct: 1747 VALTRAKSTLLIVGHASNLSGHSLWRHLVQ 1776
>gi|308807118|ref|XP_003080870.1| RENT1_NEUCR Regulator of nonsense transcripts 1 homolog
ref|XP_323582.1| h (ISS) [Ostreococcus tauri]
gi|116059331|emb|CAL55038.1| RENT1_NEUCR Regulator of nonsense transcripts 1 homolog
ref|XP_323582.1| h (ISS) [Ostreococcus tauri]
Length = 1084
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 158/455 (34%), Positives = 222/455 (48%), Gaps = 90/455 (19%)
Query: 186 KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKIL 244
KDI P +++ SQ DA+ AL ++ + ++ GPPGTGKT T V ++ ++ G S IL
Sbjct: 585 KDI---PAMQHMNQSQIDALMAALFNR-ITLIQGPPGTGKTHTAVALVQMWLRCGTSPIL 640
Query: 245 ACAASNIAVDNIVERLVPHRVRLVRLGHPAR----LLPQVLESALDAQVLRGDNSSLASD 300
+ SNIAVDN+V+ L VR+ R+G P L+P ++ES
Sbjct: 641 CTSDSNIAVDNLVDGLARAGVRVARIGRPEAVRQDLMPYMIES----------------- 683
Query: 301 IRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA 360
+ D++ R SK + Q A+ + ++ A+V+ T GA
Sbjct: 684 ------------IAGIDQDCR---------WSKSD---QFQAINNALRKAEVICATCAGA 719
Query: 361 VSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGL 419
S L+ SF +IDEA QA E A I L KG + +L GD QLPPT+ S EAE GL
Sbjct: 720 GSDILERFSFQACLIDEATQATEPATIIPLTKGCKQVVLIGDQNQLPPTIISREAEAAGL 779
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTL 479
G +LFERL + T ML VQYRMH I + S+ Y K+ + + + + L
Sbjct: 780 GESLFERL--IRSGIRTYMLKVQYRMHPAIALFPSQTFY--KVSCYRVHRRVSVVRQSVL 835
Query: 480 LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQV-VLL 538
+ E E+A H V DIG++TPY+AQ +
Sbjct: 836 T----------GPFPQSPWPRGEHREELAGGHE-------VLPGDIGVVTPYSAQARAIK 878
Query: 539 KILR------------SKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR 586
KILR + +K +EV+TVDGFQGREKE II S R+N VGFL+D
Sbjct: 879 KILRGNAPERTRFDAPADPTSMKAVEVATVDGFQGREKEVIIFSCTRANMNGNVGFLADT 938
Query: 587 RRMNVAVTRARRQCCLVCDTETVSSD-----GFLK 616
RR+NV +TRA+R +V +T+ D G+LK
Sbjct: 939 RRVNVMLTRAKRGLIIVGHMKTLQQDEIVWKGWLK 973
>gi|401624314|gb|EJS42376.1| nam7p [Saccharomyces arboricola H-6]
Length = 971
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 174/562 (30%), Positives = 277/562 (49%), Gaps = 75/562 (13%)
Query: 110 GQGVVYRLKDSSITVAFDDI-----------PEEGLNSPLRLEKLANEVTYRRMKDALIQ 158
G+G + RL +S F D P L + E + +Y RM+DAL +
Sbjct: 313 GRGYIVRLPNS-----FQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKK 367
Query: 159 LSKGVQNGPAAGLIPV-LFGEQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSK 212
+ + +G + + G Q + L K+ + F + L+ SQ +A+S L +
Sbjct: 368 FA--IDKKSISGFLYYKILGHQVVDISFDVPLPKEFSISNF-AQLNSSQSNAVSHVLQ-R 423
Query: 213 NVFMLHGPPGTGKTTTVVEII--LQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRL 270
+ ++ GPPGTGKT T I+ L ++ R +IL CA SN+AVD++ +L +++VRL
Sbjct: 424 PLSLIQGPPGTGKTVTSATIVYHLSKIHR-DRILVCAPSNVAVDHLAAKLRDLGLKVVRL 482
Query: 271 GHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRT 330
+R + +ES++ N +L + + + K LLK KD E+
Sbjct: 483 TAKSR---EDVESSVS-------NLALHNLVGRGAKGELKNLLKLKD---------EVGE 523
Query: 331 LSKEERKRQQLAV----TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIAC 386
LS + KR V +++ ADVV T GA ++LD T F V+IDE+ QA E C
Sbjct: 524 LSASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRLD-TKFRTVLIDESTQASEPEC 582
Query: 387 WIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRM 445
I ++KG++ IL GDH QL P + +A GL ++LFERL L V L VQYRM
Sbjct: 583 LIPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL--GHVPIRLEVQYRM 640
Query: 446 HEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT---------LLLIDIAGCDMEEKKDEE 496
+ ++ + S Y ++ +GV T P + ++ A EE
Sbjct: 641 NPYLSEFPSNMFYEGSLQ---NGVTIEQRTIPNSKFPWPIRGIPMMFWANYGREEISANG 697
Query: 497 DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILR-----SKDDKLKN 550
S +N EA +L + GV IG+ITPY Q +L+ ++ KD +K
Sbjct: 698 TSFLNRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIK- 756
Query: 551 MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS 610
+EV++VD FQGREK+ II+S VR+N ++ +GFL D RR+NV +TRA+ ++ + +++
Sbjct: 757 VEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLA 816
Query: 611 SDGFLKRLIEYFEEHAEYLSGS 632
+ L+ +F E + G+
Sbjct: 817 RNTLWNHLLIHFREKGCLVEGT 838
>gi|328351981|emb|CCA38380.1| hypothetical protein PP7435_Chr2-0694 [Komagataella pastoris CBS
7435]
Length = 2154
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 166/510 (32%), Positives = 251/510 (49%), Gaps = 95/510 (18%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEI-----------------ILQEVKR 239
++ SQ AI+ A +S ++ GPPGTGKT T++ I I V
Sbjct: 1276 VNKSQAQAIAGASTSSGFSLIQGPPGTGKTKTILGIVGKVLTTRNNLHSTPISIPGAVTS 1335
Query: 240 GS--------KILACAASNIAVDNIVERL---VP------HRVRLVRLGHPARLLPQV-- 280
G K+L CA SN AVD +V RL VP + ++VRLG + V
Sbjct: 1336 GPRKPETGVRKVLVCAPSNAAVDELVIRLREGVPGISGQMFKPKVVRLGRSDAINSAVKD 1395
Query: 281 --LESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERK- 337
LE +DA++ + ++ A + ++ + K+L ++N+ RE KE+ L EE K
Sbjct: 1396 LTLEELVDAEL---NETARAPKADQSIREKHNKVLA--ERNSIREALKEVSNLKPEEVKD 1450
Query: 338 ----------------------RQQLAVT-------------DVIKNADVVLTTLTGAVS 362
R++++V+ ++ A ++ +TL+G+
Sbjct: 1451 LQKRYSEITKAKNELGKKLDEQREEVSVSYRNREIQRRAVQFRILSQAQIICSTLSGSAH 1510
Query: 363 RKLD--NTSFDLVIIDEAAQALEIACWIALLKGS-RCILAGDHLQLPPTVQSVEAEKKGL 419
L +TSFD V+IDEA Q +E++ I L G RCI+ GD QLPPTV S A +
Sbjct: 1511 DFLATMDTSFDTVVIDEACQCIELSAIIPLRYGCKRCIMVGDPNQLPPTVLSQAAAEYKY 1570
Query: 420 GRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSK-IKAHPSGVKRTSSTE-- 476
++LF R+ +++ V +L VQYRMH I + SK+ YN K I + K T S
Sbjct: 1571 EQSLFVRMMNVHPKSVY-LLNVQYRMHPQISVFPSKEFYNGKLIDGEGTETKNTRSWHKK 1629
Query: 477 -PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLI---QSGVHASDIGIITPYA 532
P ID+ G E S N EA+ ++ L+ + AS IG+I+PY
Sbjct: 1630 IPPYCFIDVTG--KESTNTSNKSLFNRAEAQAVVSLIDALLGLDRDFNFASKIGVISPYK 1687
Query: 533 AQVVLLK--ILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
QVVLL+ ILR K + ++V+TVDGFQG+EK+ I+ S VR++ K VGFL+D RR+N
Sbjct: 1688 QQVVLLRDMILR-KFGRNIGIDVNTVDGFQGQEKDVILFSCVRADETKGVGFLADVRRLN 1746
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
VA+TRA+ +V +S + L++
Sbjct: 1747 VALTRAKSTLLIVGHASNLSGHSLWRHLVQ 1776
>gi|251836854|pdb|2WJV|A Chain A, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2
gi|251836855|pdb|2WJV|B Chain B, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2
gi|251836858|pdb|2WJY|A Chain A, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2 Orthorhombic Form
Length = 800
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 189/644 (29%), Positives = 301/644 (46%), Gaps = 72/644 (11%)
Query: 17 EFVSVMAPLIDLE-------KEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLM 69
++ ++ PL+ LE KE++ +IT L+ KK L D+ LM
Sbjct: 187 QYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN---KKRIAYFTLPKTDSDMRLM 243
Query: 70 --GKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L + KGD+ P K G V+ + N D + L+ SS+ +
Sbjct: 244 QGDEICLRY---KGDLAPLWK-GIGHVIKVPDNYGD--------EIAIELR-SSVGAPVE 290
Query: 128 DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKK 186
+ +++ + ++ RM+ AL + V +G I L G + V+ K
Sbjct: 291 ------VTHNFQVDFVWKSTSFDRMQSALKTFA--VDETSVSGYIYHKLLGHEVEDVIIK 342
Query: 187 DIAFKPFNS----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS- 241
K F + +L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+
Sbjct: 343 CQLPKRFTAQGLPDLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNG 401
Query: 242 KILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDI 301
+L CA SNIAVD + E++ +++VRL +R A+D+ V +L + I
Sbjct: 402 PVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQI 451
Query: 302 RK--EMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTG 359
R M L KL + KD+ E K R ++ A +++ NADV+ T G
Sbjct: 452 RNMDSMPELQ-KLQQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVG 505
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKG 418
A +L F ++IDE+ QA E C + ++ G++ IL GDH QL P V +A K G
Sbjct: 506 AGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAG 565
Query: 419 LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---- 474
L ++LFERL L + L VQYRMH + + S Y ++ + R
Sbjct: 566 LSQSLFERLVVLGIRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDF 623
Query: 475 --TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYA 532
+P + EE S +N EA +L+++G IGIITPY
Sbjct: 624 QWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYE 683
Query: 533 AQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 587
Q V ++ S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D R
Sbjct: 684 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPR 743
Query: 588 RMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
R+NVA+TRAR +V + + +S L+ Y++E + G
Sbjct: 744 RLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 787
>gi|322789964|gb|EFZ15058.1| hypothetical protein SINV_12997 [Solenopsis invicta]
Length = 966
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 194/657 (29%), Positives = 309/657 (47%), Gaps = 98/657 (14%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
++ ++ PL+ LE + D K+ T N++ V GL KT+ F
Sbjct: 130 QYQNIFGPLVKLEAD--------------YDKRLKESQTQENIE-VRWDVGLNKKTIAYF 174
Query: 77 Q--STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS---SITVAFDD--- 128
T GD+ H D + L+ +L P G G V ++ D+ + + +
Sbjct: 175 MLAKTDGDMKLMHG----DELRLR-YLGELHKPWSGIGHVIKIPDNYGEEVGIELKNNSG 229
Query: 129 IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKKD 187
P E +++ ++ + ++ RM+ AL + + V + +G I L G + VL +
Sbjct: 230 APTECISN-FVVDFIWKSTSFDRMQSALRKFA--VDDSSVSGYIYHRLLGHEVEEVLFRC 286
Query: 188 IAFKPFNS----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSK 242
K F++ +L+ SQ A+ A+ + + ++ GPPGTGKT T I+ Q VK+ G
Sbjct: 287 HLPKHFSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQNGGP 345
Query: 243 ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR 302
+L CA SN AVD + E++ +++VRL +R A+D+ V
Sbjct: 346 VLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSR-------EAIDSPV------------- 385
Query: 303 KEMKALNGKLLKTKDKNTRREIQK------ELRTLSKEERKRQQL----AVTDVIKNADV 352
AL+ ++ K+ T E+QK E LS + KR +L A ++++ ADV
Sbjct: 386 -SFLALHNQI---KNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADV 441
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS 411
+ T GA +L F ++IDE+ QA E C + ++ G++ IL GDH QL P V
Sbjct: 442 ICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMC 501
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
+A + GL ++LFERL L L VQYRMH + + S Y ++ +GV
Sbjct: 502 KKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQ---NGV-- 554
Query: 472 TSSTEPTLLLIDIAGC------------DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG 519
+ E LL ID EE S +N EA R ++ G
Sbjct: 555 -CADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCG 613
Query: 520 VHASDIGIITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRS 574
V IG+ITPY Q V ++ S KL + +EV++VD FQGREK+ II+S VRS
Sbjct: 614 VKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRS 673
Query: 575 NSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
N + +GFL+D RR+NVA+TRA+ +V + + +S L+ +++E + G
Sbjct: 674 NEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEG 730
>gi|396485880|ref|XP_003842280.1| similar to regulator of nonsense transcripts 1 [Leptosphaeria
maculans JN3]
gi|312218856|emb|CBX98801.1| similar to regulator of nonsense transcripts 1 [Leptosphaeria
maculans JN3]
Length = 1080
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 151/448 (33%), Positives = 234/448 (52%), Gaps = 44/448 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ K++ K + ++ GPPGTGKT T II K GS++L CA SN+AVD
Sbjct: 440 LNASQINAV-KSVLQKPLSLIQGPPGTGKTVTSATIIYHLCKISGSQVLVCAPSNVAVDQ 498
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ ER+ ++ VR+ +R + +ES + SL +R M N +L
Sbjct: 499 LCERIHLTGLKTVRVTAKSR---EDVESPVGFL-------SLHEQVR--MNDTNVEL--- 543
Query: 316 KDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
N +++ ++ LS ++E+K +QL A +++ ADV+ T GA +L F
Sbjct: 544 ---NKLNQLKSDVGELSSQDEKKFKQLTRAAEREILNAADVICCTCVGAGDPRLSKMKFR 600
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A GL ++LFERL L
Sbjct: 601 TVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAATAGLNQSLFERLVIL 660
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST---------EPTLLL 481
+ L VQYRMH + + S Y ++ + +R P +
Sbjct: 661 GCSPIR--LQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIRRDVDFPWPVVDSPMMFW 718
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVL 537
++ +EE S +N EA+ R ++GV SDIGIITPY Q V
Sbjct: 719 SNLG---VEEISASGTSYLNRTEAQNVEKIVTRFFKAGVQPSDIGIITPYEGQRSYVVSS 775
Query: 538 LKILRS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
++ S K + K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRA
Sbjct: 776 MQATGSFKKENYKEVEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 835
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+ ++ + + +S L+ +F+E
Sbjct: 836 KYGLVILGNPKVLSKHPLWHYLLLHFKE 863
>gi|426230268|ref|XP_004009198.1| PREDICTED: regulator of nonsense transcripts 1 [Ovis aries]
Length = 1341
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 228/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 659 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 717
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 718 QLTEKIHQTGLKVVRLCAKSR-------KAIDSPV---SFLALHNQIRNMDSMPELQ-KL 766
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 767 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 821
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 822 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 881
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 882 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 939
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 940 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 999
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 1000 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 1059
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 1060 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 1090
>gi|336385549|gb|EGO26696.1| hypothetical protein SERLADRAFT_447834 [Serpula lacrymans var.
lacrymans S7.9]
Length = 824
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 157/489 (32%), Positives = 238/489 (48%), Gaps = 93/489 (19%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
L F+ L+ E++AEI S ++ ++KG + L V GL GKTL+
Sbjct: 7 LSAFIERHRVLLAKERDAEIERSSLLLSNCGPKLLEQKGLALGGLGVVGVNIGLGGKTLV 66
Query: 75 EFQSTKGD----VLPAHKFGTHDVVVLK--------------------PNKADLGSPALG 110
E + + P H F D+ ++ P+ A+ +
Sbjct: 67 ELERPAAYHSTVIFPPHTFRPGDLARIEENISLNGLAKKNTKGKKTAAPSSAESKNVQAA 126
Query: 111 QGVVYRLK------------------DSSITVAFD---------DIPEEGLNSPLRLEKL 143
+GVVY+++ D+ I +A D ++PE R+ KL
Sbjct: 127 EGVVYKVRAILILYSNVDAERYTQVSDTRIVIAVDSSENSSDMLELPER-----CRVLKL 181
Query: 144 ANEVTYRRMKDALIQLSKGV------QNGPA----AGLIPVLFG--EQKPTVLKKDIAFK 191
AN VTY RM L L K V N A + L VL G P + D+ F
Sbjct: 182 ANSVTYDRMDKTLNTLEKAVIPSSRQANDKAQYELSQLTRVLLGITPPSPKLSVPDLQF- 240
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV------KRGSKILA 245
F+ +L+ SQK+A+ AL S V +HGPPGTGKT T++EII Q ++IL
Sbjct: 241 -FDDSLNPSQKEAVKFALESAEVACIHGPPGTGKTHTLIEIIRQLTTVTPANPNANRILI 299
Query: 246 CAASNIAVDNIVERLVP-------HRVRLVRLGHPARLLPQ--VLESALDAQVLRGDNSS 296
C ASN++VDNI+ERL+ ++ + R+GHPAR++ VLE+ L+ + R D ++
Sbjct: 300 CGASNLSVDNILERLLALPAADKNAKLSVTRIGHPARVMAHEGVLEATLEVKAGRSDQAA 359
Query: 297 LASDIRKEMKALNGKLLKTKDKNT--------RREIQKELRTLSKEERKRQQLAVTDVIK 348
LA D++ E++A L K R+++ ++++ L KE R+R+ V V+
Sbjct: 360 LAKDVKSELEAALDVLSGKKKGAKGKAPRGLERKKMWEDVKALRKEYRQREGGVVKTVLG 419
Query: 349 NADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPT 408
++ +VL T A R+L N +FD+V+IDEA QALE CWI + K + ILAGD LQLPPT
Sbjct: 420 DSQIVLATCHSAGGRQLHNHTFDVVLIDEATQALEAVCWIPIFKAKKLILAGDPLQLPPT 479
Query: 409 VQSVEAEKK 417
+ S+ +K
Sbjct: 480 ILSLNKHEK 488
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/227 (44%), Positives = 138/227 (60%), Gaps = 23/227 (10%)
Query: 422 TLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----------GVKR 471
TLF+RL +YG + ML VQYRMH I + SK LY+S++K+H S G K
Sbjct: 593 TLFDRLEKMYGPGIKRMLNVQYRMHAQICQFPSKTLYSSRLKSHESVASHLLHDLPGTKT 652
Query: 472 TSSTEPTLLL------IDIAGCDMEEKKD---EEDSTMNEGEAEVAMAHAKRLIQSGVHA 522
S E LL D AGC+ E+ + ++ S NE E V ++L+ +G+
Sbjct: 653 DSEEEQKELLGTPVVFFDTAGCEYYERLEGDGDDGSRCNENEGTVVKQWTRKLVDAGILP 712
Query: 523 SDIGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVG 581
S I IITPY AQV LL +LR ++E+ TVDG QGREKEA+IIS+VRSN K+EVG
Sbjct: 713 SQIAIITPYQAQVTLLTSLLRPTYGS--DLEIGTVDGMQGREKEAVIISLVRSNEKREVG 770
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDG-FLKRLIEYFEEHAE 627
FL ++RR+NVA+TRARR C+V D+ TV G +LK+ + + E +A+
Sbjct: 771 FLKEKRRLNVAMTRARRHLCVVGDSSTVVHGGSYLKKWLVWLEANAD 817
>gi|66805537|ref|XP_636490.1| hypothetical protein DDB_G0288923 [Dictyostelium discoideum AX4]
gi|74852418|sp|Q54I89.1|RENT1_DICDI RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=Up-frameshift suppressor 1 homolog
gi|60464869|gb|EAL62985.1| hypothetical protein DDB_G0288923 [Dictyostelium discoideum AX4]
Length = 1331
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 145/456 (31%), Positives = 228/456 (50%), Gaps = 41/456 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKT---TTVVEIILQEVKRGSKILACAASNIAV 253
L+ SQ A++K L++ + ++ GPPGTGKT + ++ +++ VK K+L C SN+A+
Sbjct: 537 LNESQISAVNKVLTAP-LSLIQGPPGTGKTVISSFIIHHLVKYVKGNDKVLVCTPSNVAI 595
Query: 254 DNIVERLVPHRVRLVRLGHPAR--LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGK 311
D + +L +++VRL R + V L QV + D +G+
Sbjct: 596 DQLTGKLHEIGLKVVRLSSKLREEVASPVEHLTLHKQVYKLDQMG------------DGE 643
Query: 312 LLKTKDKNTRREIQKELRTLSKEERKR----QQLAVTDVIKNADVVLTTLTGAVSRKLDN 367
L K R++++ +LS E+ KR +++ +++ ADV+ T GA +L
Sbjct: 644 LGKL------RKLKEAFGSLSNEDEKRYIYLRRMMEMAILRKADVICATCVGAGDPRLSQ 697
Query: 368 TSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFER 426
F ++IDE+ QA E C I L+ G++ IL GDH QL P + + GL ++LFER
Sbjct: 698 FRFPHILIDESTQASEPECLIPLMMGAKQVILVGDHRQLGPVLLCKKVVDAGLSQSLFER 757
Query: 427 LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST-----EPTLLL 481
L L LT+QYRMH + + S Y ++ + S R S + +P +
Sbjct: 758 LISL--GHHPERLTIQYRMHPSLTEFPSNTSYEGQLVSELSHTDRDSQSKFPWPQPKDPM 815
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL 541
EE S +N EA + + ++ G IGIITPY Q +
Sbjct: 816 FFFNCTGSEEISSSGTSFINTTEASICEKIVTKFLELGSLPGQIGIITPYEGQRAYITSH 875
Query: 542 RSKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
K KL K++EV++VD FQGREK+ II+S VRSN + +GFL D RR+NVA+TRA
Sbjct: 876 MQKSGKLNLELYKSIEVASVDSFQGREKDYIILSCVRSNDYQGIGFLQDPRRLNVALTRA 935
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
R ++ + + +S D LI +F+ + GS
Sbjct: 936 RFGLIILGNAKVLSKDPLWNSLISHFKNKNVLVEGS 971
>gi|68478193|ref|XP_716838.1| hypothetical protein CaO19.8554 [Candida albicans SC5314]
gi|68478314|ref|XP_716778.1| hypothetical protein CaO19.939 [Candida albicans SC5314]
gi|46438461|gb|EAK97791.1| hypothetical protein CaO19.939 [Candida albicans SC5314]
gi|46438523|gb|EAK97852.1| hypothetical protein CaO19.8554 [Candida albicans SC5314]
Length = 1019
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 171/568 (30%), Positives = 273/568 (48%), Gaps = 43/568 (7%)
Query: 88 KFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS---SITVAFDD---IPEEGLNSPLRLE 141
K D ++L+ + G P G G + RL ++ T+ + IP L + E
Sbjct: 324 KVAVGDEIILR-YSGNQGEPWEGHGYILRLPNAYQEEFTLELNPSKIIPPTQLTTDFTAE 382
Query: 142 KLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK---PFNSNLD 198
+ +Y RM+ A+ + ++ + +L E P D+ K P + L+
Sbjct: 383 FVWKGTSYDRMQQAMKDFATDEESVSSFIYHKLLGHEVLPIEFDIDLPKKFSHPKLTELN 442
Query: 199 HSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIV 257
SQ +A+ L + + ++ GPPGTGKT T II K KIL CA SN+AVD++
Sbjct: 443 VSQTNAVRTVLQ-RPLSLIQGPPGTGKTVTSATIIYHLSKLNKQKILVCAPSNVAVDHLA 501
Query: 258 ERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKD 317
+L + +VRL +R + +ES++ L ++ + S+ + E+K KL+K K+
Sbjct: 502 AKLDLLGLNVVRLTAKSR---EDVESSVSHLAL---HNLVNSNAKGELK----KLIKLKN 551
Query: 318 KNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDE 377
+ + L K + + V+ A+VV T GA R+L F V+IDE
Sbjct: 552 QVGELSVADTNNYL-----KLSRSSEMKVLNKAEVVCCTCVGAADRRLSQFRFKTVLIDE 606
Query: 378 AAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT 436
+ QA E I ++KG++ IL GDH QL P + +A GL ++LFERL ++ V
Sbjct: 607 STQASEPEVLIPIVKGAKQVILVGDHQQLGPVILDKKAADAGLKQSLFERL--VFLGHVP 664
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR--TSSTEPTLL----LIDIAGCDME 490
L VQYRMH + + S Y ++ + R ST P + ++ A E
Sbjct: 665 IRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFWANYGRE 724
Query: 491 EKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL-------KILRS 543
E +S +N EA +L + G+ IG+ITPY Q L L
Sbjct: 725 ELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQIGVITPYEGQRAYLVQFMSVNSTLLD 784
Query: 544 KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLV 603
K D+ N+E+++VD FQGREK+ II+S VR+N + +GFLSD RR+NVA+TRA+ ++
Sbjct: 785 KRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALTRAKYGLVIL 844
Query: 604 CDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+ ++ + L+ +F E + G
Sbjct: 845 GNPRSLCRNRLWNHLLIHFREKGCLVDG 872
>gi|169852646|ref|XP_001833005.1| ATP dependent helicase [Coprinopsis cinerea okayama7#130]
gi|116505799|gb|EAU88694.1| ATP dependent helicase [Coprinopsis cinerea okayama7#130]
Length = 1079
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 144/444 (32%), Positives = 229/444 (51%), Gaps = 36/444 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+HSQ A+ K++ K + ++ GPPGTGKT T I+ K ++L CA SN+AVD
Sbjct: 444 LNHSQMYAV-KSVLQKPLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPSNVAVDQ 502
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R + L+S+++ L ++ + I + KL++
Sbjct: 503 LTEKIHATGLKVVRLTAKSR---EALDSSVNFLTLHQQVANSTTHIELQ------KLIQL 553
Query: 316 KDKNTRREIQKELRTLSKEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
K++ Q EL S +ERK + L +++ ADV+ T GA +L F
Sbjct: 554 KNE------QGELS--SNDERKYKTLIRQCEKEILGAADVICCTCVGAGDPRLSKLRFRT 605
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDEA QA E C I L+ G + ++ GDH QL P + + +A + GL ++LFERL L
Sbjct: 606 VLIDEATQAAEPECMIPLVLGCKQVVMVGDHQQLGPVIMNKKAARAGLTQSLFERLVLLG 665
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTE------PTLLLIDIA 485
+ L VQYRMH + + S Y ++ + +R P +
Sbjct: 666 NRPIR--LQVQYRMHPCLSEFPSNMFYEGSLQNGVTAPERLRKNVDFPWPVPDTPMFFYQ 723
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA + +SGV + IG++TPY Q V ++
Sbjct: 724 NLGQEEISSSGTSFLNRTEASNVEKIVTKFFKSGVVPNQIGVVTPYEGQRSYIVNYMQFN 783
Query: 542 RS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S K D K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRA+
Sbjct: 784 GSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGV 843
Query: 601 CLVCDTETVSSDGFLKRLIEYFEE 624
++ + + +S L+ +++E
Sbjct: 844 VILGNPKVLSKHPLWHYLLTHYKE 867
>gi|410053595|ref|XP_512972.4| PREDICTED: regulator of nonsense transcripts 1 [Pan troglodytes]
Length = 1057
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 228/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 470 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 528
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 529 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 577
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 578 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 632
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 633 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 692
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 693 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 750
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 751 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 810
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 811 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 870
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ Y++E + G
Sbjct: 871 IIVGNPKALSKQPLWNHLLNYYKEQKVLVEG 901
>gi|340721321|ref|XP_003399071.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Bombus terrestris]
Length = 1119
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 195/657 (29%), Positives = 310/657 (47%), Gaps = 98/657 (14%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
++ ++ PL+ LE + D K+ T N++ V GL KT+ F
Sbjct: 285 QYQNIFGPLVKLEAD--------------YDKRLKESQTQENIE-VRWDVGLNKKTIAYF 329
Query: 77 Q--STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS---SITVAFDD--- 128
T GD+ H D + L+ +L P G G V ++ D+ + + +
Sbjct: 330 MLAKTDGDMKLMHG----DELRLR-YLGELHKPWSGIGHVIKIPDNYGEEVGIELKNNSG 384
Query: 129 IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKKD 187
P E +++ ++ + ++ RM+ AL + + V + +G I L G + VL +
Sbjct: 385 APTECVSN-FVVDFIWKSTSFDRMQLALRKFA--VDDTSVSGYIYHRLLGHEVEEVLFRC 441
Query: 188 IAFKPFNS----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSK 242
K F++ +L+ SQ A+ A+ + + ++ GPPGTGKT T I+ Q VK+ G
Sbjct: 442 HLPKHFSAPNLPDLNRSQVYAVKHAVQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQNGGP 500
Query: 243 ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR 302
+L CA SN AVD + E++ +++VRL +R A+D+ V
Sbjct: 501 VLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSR-------EAIDSPV------------- 540
Query: 303 KEMKALNGKLLKTKDKNTRREIQK------ELRTLSKEERKRQQL----AVTDVIKNADV 352
AL+ ++ K+ T E+QK E LS + KR +L A ++++ ADV
Sbjct: 541 -SFLALHNQI---KNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADV 596
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS 411
+ T GA +L F ++IDE+ QA E C + ++ G++ IL GDH QL P V
Sbjct: 597 ICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMC 656
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
+A + GL ++LFERL L L VQYRMH + + S Y ++ +GV
Sbjct: 657 KKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQ---NGV-- 709
Query: 472 TSSTEPTLLLIDIAGC------------DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG 519
+ E LL ID EE S +N EA A R ++ G
Sbjct: 710 -CADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCG 768
Query: 520 VHASDIGIITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRS 574
V IG+ITPY Q V ++ S KL + +EV++VD FQGREK+ II+S VRS
Sbjct: 769 VKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRS 828
Query: 575 NSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
N + +GFL+D RR+NVA+TRA+ +V + + +S L+ +++E + G
Sbjct: 829 NEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEG 885
>gi|157130590|ref|XP_001661931.1| nonsense-mediated mrna decay protein 1 (rent1) [Aedes aegypti]
gi|108871854|gb|EAT36079.1| AAEL011817-PA [Aedes aegypti]
Length = 1121
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 146/456 (32%), Positives = 230/456 (50%), Gaps = 43/456 (9%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVD 254
+L+ SQ A+ AL + + ++ GPPGTGKT T I+ Q V+ G +L CA SN AVD
Sbjct: 462 DLNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIVYQLVRLNGGPVLVCAPSNTAVD 520
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGD--NSSLASDIRK--EMKALNG 310
+ E++ +++VR+ +R + +ES + L N SD++K ++K G
Sbjct: 521 QLTEKIHRTSLKVVRVCAKSR---EAIESPVSFLALHNQIRNMEQNSDLKKLQQLKDETG 577
Query: 311 KLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
+L + +K R+L K+ + ++++ ADV+ T GA +L F
Sbjct: 578 ELSSSD--------EKRYRSLKKQAER-------ELLEAADVICCTCVGAGDPRLQRIKF 622
Query: 371 DLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
++IDE+ Q+ E C + ++ G++ IL GDH QL P V +A K GL ++LFERL
Sbjct: 623 SSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVV 682
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR--------TSSTEPTLLL 481
L L VQYRMH + + S Y ++ +R S P L
Sbjct: 683 L--GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEERKLKVDFPWPSPDTPMFFL 740
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVL 537
+ EE S +N EA R +++GV IGIITPY Q V
Sbjct: 741 VTQG---QEEIAGSGTSYLNRTEASNVEKITTRFLKAGVKPDQIGIITPYEGQRAYLVQY 797
Query: 538 LKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
++ S KL + +E+++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRA
Sbjct: 798 MQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRA 857
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
+ +V + + +S L+ ++++ + GS
Sbjct: 858 KYGIIIVGNPKVLSKQQLWNHLLNFYKDKKVLVEGS 893
>gi|238882462|gb|EEQ46100.1| ATP-dependent helicase NAM7 [Candida albicans WO-1]
Length = 1019
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 171/568 (30%), Positives = 273/568 (48%), Gaps = 43/568 (7%)
Query: 88 KFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS---SITVAFDD---IPEEGLNSPLRLE 141
K D ++L+ + G P G G + RL ++ T+ + IP L + E
Sbjct: 324 KVAVGDEIILR-YSGNQGEPWEGHGYILRLPNAYQEEFTLELNPSKIIPPTQLTTDFTAE 382
Query: 142 KLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK---PFNSNLD 198
+ +Y RM+ A+ + ++ + +L E P D+ K P + L+
Sbjct: 383 FVWKGTSYDRMQQAMKDFATDEESVSSFIYHKLLGHEVLPIEFDIDLPKKFSHPKLTELN 442
Query: 199 HSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIV 257
SQ +A+ L + + ++ GPPGTGKT T II K KIL CA SN+AVD++
Sbjct: 443 VSQTNAVRTVLQ-RPLSLIQGPPGTGKTVTSATIIYHLSKLNKQKILVCAPSNVAVDHLA 501
Query: 258 ERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKD 317
+L + +VRL +R + +ES++ L ++ + S+ + E+K KL+K K+
Sbjct: 502 AKLDLLGLNVVRLTAKSR---EDVESSVSHLAL---HNLVNSNAKGELK----KLIKLKN 551
Query: 318 KNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDE 377
+ + L K + + V+ A+VV T GA R+L F V+IDE
Sbjct: 552 QVGELSVADTNNYL-----KLSRSSEMKVLNKAEVVCCTCVGAADRRLSQFRFKTVLIDE 606
Query: 378 AAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT 436
+ QA E I ++KG++ IL GDH QL P + +A GL ++LFERL ++ V
Sbjct: 607 STQASEPEVLIPIVKGAKQVILVGDHQQLGPVILDKKAADAGLKQSLFERL--VFLGHVP 664
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR--TSSTEPTLL----LIDIAGCDME 490
L VQYRMH + + S Y ++ + R ST P + ++ A E
Sbjct: 665 IRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFWANYGRE 724
Query: 491 EKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL-------KILRS 543
E +S +N EA +L + G+ IG+ITPY Q L L
Sbjct: 725 ELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQIGVITPYEGQRAYLVQFMSVNSTLLD 784
Query: 544 KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLV 603
K D+ N+E+++VD FQGREK+ II+S VR+N + +GFLSD RR+NVA+TRA+ ++
Sbjct: 785 KRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALTRAKYGLVIL 844
Query: 604 CDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+ ++ + L+ +F E + G
Sbjct: 845 GNPRSLCRNRLWNHLLIHFREKGCLVDG 872
>gi|383847287|ref|XP_003699286.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Megachile rotundata]
Length = 1106
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 196/657 (29%), Positives = 309/657 (47%), Gaps = 98/657 (14%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
++ ++ PL+ LE + D K+ T N++ V GL KT+ F
Sbjct: 272 QYQNIFGPLVKLEAD--------------YDKRLKESQTQENIE-VRWDVGLNKKTIAYF 316
Query: 77 Q--STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS---SITVAFDD--- 128
T GD+ H D + L+ +L P G G V ++ D+ + + +
Sbjct: 317 MLAKTDGDMKLMHG----DELRLR-YLGELHKPWSGIGHVIKIPDNYGEEVGIELKNNSG 371
Query: 129 IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKKD 187
P E + S ++ + ++ RM+ AL + + V + +G I L G + VL +
Sbjct: 372 APTECV-SNFVVDFIWKSTSFDRMQLALRKFA--VDDTSVSGYIYHRLLGHEVEEVLFRC 428
Query: 188 IAFKPFNS----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSK 242
K F++ +L+ SQ A+ A+ + + ++ GPPGTGKT T I+ Q VK+ G
Sbjct: 429 HLPKHFSAPNLPDLNRSQVYAVKHAVQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQNGGP 487
Query: 243 ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR 302
+L CA SN AVD + E++ +++VRL +R A+D+ V
Sbjct: 488 VLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSR-------EAIDSPV------------- 527
Query: 303 KEMKALNGKLLKTKDKNTRREIQK------ELRTLSKEERKRQQL----AVTDVIKNADV 352
AL+ ++ K+ T E+QK E LS + KR +L A ++++ ADV
Sbjct: 528 -SFLALHNQI---KNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADV 583
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS 411
+ T GA +L F ++IDE+ QA E C + ++ G++ IL GDH QL P V
Sbjct: 584 ICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMC 643
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
+A + GL ++LFERL L L VQYRMH + + S Y ++ +GV
Sbjct: 644 KKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQ---NGV-- 696
Query: 472 TSSTEPTLLLIDIAGC------------DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG 519
+ E LL ID EE S +N EA A R ++ G
Sbjct: 697 -CADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCG 755
Query: 520 VHASDIGIITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRS 574
V IG+ITPY Q V ++ S KL + +EV++VD FQGREK+ II+S VRS
Sbjct: 756 VKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRS 815
Query: 575 NSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
N + +GFL+D RR+NVA+TRA+ +V + + +S L+ +++E + G
Sbjct: 816 NEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEG 872
>gi|383847285|ref|XP_003699285.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Megachile rotundata]
Length = 1119
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 195/657 (29%), Positives = 310/657 (47%), Gaps = 98/657 (14%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
++ ++ PL+ LE + D K+ T N++ V GL KT+ F
Sbjct: 285 QYQNIFGPLVKLEAD--------------YDKRLKESQTQENIE-VRWDVGLNKKTIAYF 329
Query: 77 Q--STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS---SITVAFDD--- 128
T GD+ H D + L+ +L P G G V ++ D+ + + +
Sbjct: 330 MLAKTDGDMKLMHG----DELRLR-YLGELHKPWSGIGHVIKIPDNYGEEVGIELKNNSG 384
Query: 129 IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKKD 187
P E +++ ++ + ++ RM+ AL + + V + +G I L G + VL +
Sbjct: 385 APTECVSN-FVVDFIWKSTSFDRMQLALRKFA--VDDTSVSGYIYHRLLGHEVEEVLFRC 441
Query: 188 IAFKPFNS----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSK 242
K F++ +L+ SQ A+ A+ + + ++ GPPGTGKT T I+ Q VK+ G
Sbjct: 442 HLPKHFSAPNLPDLNRSQVYAVKHAVQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQNGGP 500
Query: 243 ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR 302
+L CA SN AVD + E++ +++VRL +R A+D+ V
Sbjct: 501 VLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSR-------EAIDSPV------------- 540
Query: 303 KEMKALNGKLLKTKDKNTRREIQK------ELRTLSKEERKRQQL----AVTDVIKNADV 352
AL+ ++ K+ T E+QK E LS + KR +L A ++++ ADV
Sbjct: 541 -SFLALHNQI---KNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADV 596
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS 411
+ T GA +L F ++IDE+ QA E C + ++ G++ IL GDH QL P V
Sbjct: 597 ICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMC 656
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
+A + GL ++LFERL L L VQYRMH + + S Y ++ +GV
Sbjct: 657 KKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQ---NGV-- 709
Query: 472 TSSTEPTLLLIDIAGC------------DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG 519
+ E LL ID EE S +N EA A R ++ G
Sbjct: 710 -CADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCG 768
Query: 520 VHASDIGIITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRS 574
V IG+ITPY Q V ++ S KL + +EV++VD FQGREK+ II+S VRS
Sbjct: 769 VKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRS 828
Query: 575 NSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
N + +GFL+D RR+NVA+TRA+ +V + + +S L+ +++E + G
Sbjct: 829 NEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEG 885
>gi|66553048|ref|XP_393330.2| PREDICTED: regulator of nonsense transcripts 1 [Apis mellifera]
gi|380015761|ref|XP_003691864.1| PREDICTED: regulator of nonsense transcripts 1-like [Apis florea]
Length = 1119
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 195/657 (29%), Positives = 310/657 (47%), Gaps = 98/657 (14%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
++ ++ PL+ LE + D K+ T N++ V GL KT+ F
Sbjct: 285 QYQNIFGPLVKLEAD--------------YDKRLKESQTQENIE-VRWDVGLNKKTIAYF 329
Query: 77 Q--STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS---SITVAFDD--- 128
T GD+ H D + L+ +L P G G V ++ D+ + + +
Sbjct: 330 MLAKTDGDMKLMHG----DELRLR-YLGELHKPWSGIGHVIKIPDNYGEEVGIELKNNSG 384
Query: 129 IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKKD 187
P E +++ ++ + ++ RM+ AL + + V + +G I L G + VL +
Sbjct: 385 APTECVSN-FVVDFIWKSTSFDRMQLALRKFA--VDDTSVSGYIYHRLLGHEVEEVLFRC 441
Query: 188 IAFKPFNS----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSK 242
K F++ +L+ SQ A+ A+ + + ++ GPPGTGKT T I+ Q VK+ G
Sbjct: 442 HLPKHFSAPNLPDLNRSQVYAVKHAVQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQNGGP 500
Query: 243 ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR 302
+L CA SN AVD + E++ +++VRL +R A+D+ V
Sbjct: 501 VLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSR-------EAIDSPV------------- 540
Query: 303 KEMKALNGKLLKTKDKNTRREIQK------ELRTLSKEERKRQQL----AVTDVIKNADV 352
AL+ ++ K+ T E+QK E LS + KR +L A ++++ ADV
Sbjct: 541 -SFLALHNQI---KNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADV 596
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS 411
+ T GA +L F ++IDE+ QA E C + ++ G++ IL GDH QL P V
Sbjct: 597 ICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMC 656
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
+A + GL ++LFERL L L VQYRMH + + S Y ++ +GV
Sbjct: 657 KKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQ---NGV-- 709
Query: 472 TSSTEPTLLLIDIAGC------------DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG 519
+ E LL ID EE S +N EA A R ++ G
Sbjct: 710 -CADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCG 768
Query: 520 VHASDIGIITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRS 574
V IG+ITPY Q V ++ S KL + +EV++VD FQGREK+ II+S VRS
Sbjct: 769 VKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRS 828
Query: 575 NSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
N + +GFL+D RR+NVA+TRA+ +V + + +S L+ +++E + G
Sbjct: 829 NEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEG 885
>gi|350406738|ref|XP_003487866.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Bombus impatiens]
Length = 1106
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 195/657 (29%), Positives = 310/657 (47%), Gaps = 98/657 (14%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
++ ++ PL+ LE + D K+ T N++ V GL KT+ F
Sbjct: 272 QYQNIFGPLVKLEAD--------------YDKRLKESQTQENIE-VRWDVGLNKKTIAYF 316
Query: 77 Q--STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS---SITVAFDD--- 128
T GD+ H D + L+ +L P G G V ++ D+ + + +
Sbjct: 317 MLAKTDGDMKLMHG----DELRLR-YLGELHKPWSGIGHVIKIPDNYGEEVGIELKNNSG 371
Query: 129 IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKKD 187
P E +++ ++ + ++ RM+ AL + + V + +G I L G + VL +
Sbjct: 372 APTECVSN-FVVDFIWKSTSFDRMQLALRKFA--VDDTSVSGYIYHRLLGHEVEEVLFRC 428
Query: 188 IAFKPFNS----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSK 242
K F++ +L+ SQ A+ A+ + + ++ GPPGTGKT T I+ Q VK+ G
Sbjct: 429 HLPKHFSAPNLPDLNRSQVYAVKHAVQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQNGGP 487
Query: 243 ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR 302
+L CA SN AVD + E++ +++VRL +R A+D+ V
Sbjct: 488 VLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSR-------EAIDSPV------------- 527
Query: 303 KEMKALNGKLLKTKDKNTRREIQK------ELRTLSKEERKRQQL----AVTDVIKNADV 352
AL+ ++ K+ T E+QK E LS + KR +L A ++++ ADV
Sbjct: 528 -SFLALHNQI---KNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADV 583
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS 411
+ T GA +L F ++IDE+ QA E C + ++ G++ IL GDH QL P V
Sbjct: 584 ICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMC 643
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
+A + GL ++LFERL L L VQYRMH + + S Y ++ +GV
Sbjct: 644 KKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQ---NGV-- 696
Query: 472 TSSTEPTLLLIDIAGC------------DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG 519
+ E LL ID EE S +N EA A R ++ G
Sbjct: 697 -CADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCG 755
Query: 520 VHASDIGIITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRS 574
V IG+ITPY Q V ++ S KL + +EV++VD FQGREK+ II+S VRS
Sbjct: 756 VKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRS 815
Query: 575 NSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
N + +GFL+D RR+NVA+TRA+ +V + + +S L+ +++E + G
Sbjct: 816 NEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEG 872
>gi|340721325|ref|XP_003399073.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Bombus terrestris]
Length = 1106
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 195/657 (29%), Positives = 310/657 (47%), Gaps = 98/657 (14%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
++ ++ PL+ LE + D K+ T N++ V GL KT+ F
Sbjct: 272 QYQNIFGPLVKLEAD--------------YDKRLKESQTQENIE-VRWDVGLNKKTIAYF 316
Query: 77 Q--STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS---SITVAFDD--- 128
T GD+ H D + L+ +L P G G V ++ D+ + + +
Sbjct: 317 MLAKTDGDMKLMHG----DELRLR-YLGELHKPWSGIGHVIKIPDNYGEEVGIELKNNSG 371
Query: 129 IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKKD 187
P E +++ ++ + ++ RM+ AL + + V + +G I L G + VL +
Sbjct: 372 APTECVSN-FVVDFIWKSTSFDRMQLALRKFA--VDDTSVSGYIYHRLLGHEVEEVLFRC 428
Query: 188 IAFKPFNS----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSK 242
K F++ +L+ SQ A+ A+ + + ++ GPPGTGKT T I+ Q VK+ G
Sbjct: 429 HLPKHFSAPNLPDLNRSQVYAVKHAVQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQNGGP 487
Query: 243 ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR 302
+L CA SN AVD + E++ +++VRL +R A+D+ V
Sbjct: 488 VLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSR-------EAIDSPV------------- 527
Query: 303 KEMKALNGKLLKTKDKNTRREIQK------ELRTLSKEERKRQQL----AVTDVIKNADV 352
AL+ ++ K+ T E+QK E LS + KR +L A ++++ ADV
Sbjct: 528 -SFLALHNQI---KNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADV 583
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS 411
+ T GA +L F ++IDE+ QA E C + ++ G++ IL GDH QL P V
Sbjct: 584 ICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMC 643
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
+A + GL ++LFERL L L VQYRMH + + S Y ++ +GV
Sbjct: 644 KKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQ---NGV-- 696
Query: 472 TSSTEPTLLLIDIAGC------------DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG 519
+ E LL ID EE S +N EA A R ++ G
Sbjct: 697 -CADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCG 755
Query: 520 VHASDIGIITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRS 574
V IG+ITPY Q V ++ S KL + +EV++VD FQGREK+ II+S VRS
Sbjct: 756 VKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRS 815
Query: 575 NSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
N + +GFL+D RR+NVA+TRA+ +V + + +S L+ +++E + G
Sbjct: 816 NEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEG 872
>gi|268566961|ref|XP_002639857.1| Hypothetical protein CBG12210 [Caenorhabditis briggsae]
Length = 615
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 140/455 (30%), Positives = 239/455 (52%), Gaps = 56/455 (12%)
Query: 197 LDHSQKDAISKALS-SKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDN 255
L+ SQ+ A+S AL+ +N+ + GPPGTGKT + EI+ Q +K+ ++L CA +++AV N
Sbjct: 155 LNPSQQAAVSAALNPQRNLLCIQGPPGTGKTRVIAEIVHQLLKKKKRVLICAPTHVAVQN 214
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK-ALNGKLLK 314
++ + R R+ + + P+ ++ L + ++ R E + + L+
Sbjct: 215 AMDAV---RRRMCQ-----DIPPETVQKEL----------CILNNTRDEFQDHPSTAKLE 256
Query: 315 TKDKNTRREIQKELRT--LSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF-- 370
T +K R QK T ++ E K + + + +TL + +KL +
Sbjct: 257 TMEKELMRSNQKGQSTKLMAYECMKLRCSIYQSIYAPRRAIFSTLGTSSIQKLPEYDWKA 316
Query: 371 DLVIIDEAAQALEIACWIALLKGSRC---ILAGDHLQLPPTVQSVEAEKKGLGRTLFERL 427
D++I+DEAAQ E + W+ L C +L GD QLP V S +A + G +L E+L
Sbjct: 317 DVMIVDEAAQCTEPSTWVPALTTPTCKKLVLVGDQKQLPAIVLSDKAVRANFGMSLMEKL 376
Query: 428 ADLYG-DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS----GVKRTSSTEPT---- 478
A+ + + + +L QYRM+E IM+WS++ YN+++ AH S ++ PT
Sbjct: 377 AEEFAKNNINILLNEQYRMNEKIMHWSNEHFYNNQLTAHSSVSDITLRDIYPKIPTNYIA 436
Query: 479 ---LLLIDIAGC-DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQS-GVHASDIGIITPYAA 533
+ +ID+ D ++ + +S N GE V + RL+ GV+ DI +I PY +
Sbjct: 437 NKPIFMIDMKNFEDRSQESFDSNSYSNTGELNVVSNYVIRLVTDVGVNPKDIAVIAPYYS 496
Query: 534 QVVLLKILRSKDDKLKN-----MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
Q+ +KL+N ++V+TVD FQG+E+E II +VR N + +GFL + RR
Sbjct: 497 QI----------EKLRNSISFRVDVNTVDAFQGQEREVIIFCLVRDNDEGSIGFLKETRR 546
Query: 589 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFE 623
+NVA+TRA+RQ LV +++ + + +K L Y +
Sbjct: 547 LNVAITRAKRQFVLVGNSDMLQRNRHIKSLYRYLK 581
>gi|361128156|gb|EHL00106.1| putative Regulator of nonsense transcripts 1 like protein [Glarea
lozoyensis 74030]
Length = 898
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 147/449 (32%), Positives = 235/449 (52%), Gaps = 46/449 (10%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ K++ K + ++ GPPGTGKT T II K G ++L CA SN+AVD
Sbjct: 255 LNSSQINAV-KSVLQKPLSLIQGPPGTGKTVTSATIIYHLAKVNGGQVLVCAPSNVAVDQ 313
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLES-----ALDAQVLRGDNSSLASDIRKEMKALNG 310
+ ER+ +++VRL +R + +ES +L QV R ++S+L ++K G
Sbjct: 314 LCERIHRTGLKVVRLTAKSR---EDVESTVGFLSLHEQV-RMNDSNLELTKLSQLKGELG 369
Query: 311 KLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
+L ++D +K+ +TL++ + +++ +ADV+ T GA +L F
Sbjct: 370 EL-SSQD-------EKKFKTLTRAAER-------EILNSADVICCTCVGAGDPRLAKMKF 414
Query: 371 DLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A K GL ++LFERL
Sbjct: 415 RTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVI 474
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS---------STEPTLL 480
L + L VQYRMH + + S Y ++ + +R P +
Sbjct: 475 LGLAPIR--LNVQYRMHPCLSQFPSNMFYEGSLQNGVTMQQRLRRDVDFPWPVGDTPMMF 532
Query: 481 LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ--VVLL 538
++ EE S +N EA R ++GV DIG+ITPY Q V+
Sbjct: 533 WSNLGN---EEISASGTSYLNRTEASNVEKIVTRFFKAGVQPQDIGVITPYEGQRSFVVS 589
Query: 539 KILRS---KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
+ + K + K +EV++VD FQGREK+ I++S VRSN + +GFLSD RR+NVA+TR
Sbjct: 590 SMQNTGTFKKENYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTR 649
Query: 596 ARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
A+ ++ + + +S L+ +F+E
Sbjct: 650 AKYGLVILGNPKVLSKHPLWHYLLLHFKE 678
>gi|350406734|ref|XP_003487865.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Bombus impatiens]
Length = 1119
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 195/657 (29%), Positives = 310/657 (47%), Gaps = 98/657 (14%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
++ ++ PL+ LE + D K+ T N++ V GL KT+ F
Sbjct: 285 QYQNIFGPLVKLEAD--------------YDKRLKESQTQENIE-VRWDVGLNKKTIAYF 329
Query: 77 Q--STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS---SITVAFDD--- 128
T GD+ H D + L+ +L P G G V ++ D+ + + +
Sbjct: 330 MLAKTDGDMKLMHG----DELRLR-YLGELHKPWSGIGHVIKIPDNYGEEVGIELKNNSG 384
Query: 129 IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKKD 187
P E +++ ++ + ++ RM+ AL + + V + +G I L G + VL +
Sbjct: 385 APTECVSN-FVVDFIWKSTSFDRMQLALRKFA--VDDTSVSGYIYHRLLGHEVEEVLFRC 441
Query: 188 IAFKPFNS----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSK 242
K F++ +L+ SQ A+ A+ + + ++ GPPGTGKT T I+ Q VK+ G
Sbjct: 442 HLPKHFSAPNLPDLNRSQVYAVKHAVQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQNGGP 500
Query: 243 ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR 302
+L CA SN AVD + E++ +++VRL +R A+D+ V
Sbjct: 501 VLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSR-------EAIDSPV------------- 540
Query: 303 KEMKALNGKLLKTKDKNTRREIQK------ELRTLSKEERKRQQL----AVTDVIKNADV 352
AL+ ++ K+ T E+QK E LS + KR +L A ++++ ADV
Sbjct: 541 -SFLALHNQI---KNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADV 596
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS 411
+ T GA +L F ++IDE+ QA E C + ++ G++ IL GDH QL P V
Sbjct: 597 ICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMC 656
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
+A + GL ++LFERL L L VQYRMH + + S Y ++ +GV
Sbjct: 657 KKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQ---NGV-- 709
Query: 472 TSSTEPTLLLIDIAGC------------DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG 519
+ E LL ID EE S +N EA A R ++ G
Sbjct: 710 -CADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCG 768
Query: 520 VHASDIGIITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRS 574
V IG+ITPY Q V ++ S KL + +EV++VD FQGREK+ II+S VRS
Sbjct: 769 VKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRS 828
Query: 575 NSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
N + +GFL+D RR+NVA+TRA+ +V + + +S L+ +++E + G
Sbjct: 829 NEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEG 885
>gi|410921828|ref|XP_003974385.1| PREDICTED: regulator of nonsense transcripts 1-like [Takifugu
rubripes]
Length = 1099
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 188/646 (29%), Positives = 301/646 (46%), Gaps = 76/646 (11%)
Query: 17 EFVSVMAPLIDLE-------KEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLM 69
++ ++ PL+ LE KE++ +IT L+ KK L D+ LM
Sbjct: 282 QYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN---KKRIAYFTLPKTDSDMRLM 338
Query: 70 --GKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFD 127
+ L + KGD+ P K G V+ + N D + L+ S A
Sbjct: 339 QGDEICLRY---KGDLAPLWK-GIGHVIKVPDNYGD--------EIAIELRTS--VGAPV 384
Query: 128 DIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKK 186
+IP +++ + ++ RM+ AL + V +G I L G + V K
Sbjct: 385 EIPHN-----YQVDFVWKSTSFDRMQSALKTFA--VDETSVSGYIYHKLLGHEVEDVTIK 437
Query: 187 DIAFKPFNSN----LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS- 241
K F +N L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+
Sbjct: 438 CQLPKRFTANGLPDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLSRQGNG 496
Query: 242 KILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDI 301
+L CA SNIAVD + E++ +++VRL +R + +ES + L S++ D
Sbjct: 497 PVLVCAPSNIAVDQLTEKIDKTGLKVVRLCAKSR---EAIESPVSFLALHNQISNM--DS 551
Query: 302 RKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKR----QQLAVTDVIKNADVVLTTL 357
E++ L ++++ E LS + KR ++ A +++ NADV+ T
Sbjct: 552 MPELQKL-------------QQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTC 598
Query: 358 TGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEK 416
GA +L F ++IDE+ QA E C + ++ G++ IL GDH QL P V +A K
Sbjct: 599 VGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAK 658
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS-- 474
GL ++LFERL L + L VQYRMH + + S Y ++ + R
Sbjct: 659 AGLSQSLFERLVVLGIRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAGDRIKKGF 716
Query: 475 ----TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITP 530
+P + EE S +N EA RL+++G IGIITP
Sbjct: 717 DFQWPQPEKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITP 776
Query: 531 YAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSD 585
Y Q V ++ S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D
Sbjct: 777 YEGQRSYLVQYMQFSGSLHTKLYQQVEIASVDAFQGREKDFIILSCVRANEHQGIGFLND 836
Query: 586 RRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
RR+NVA+TRA+ +V + + +S L+ ++E + G
Sbjct: 837 PRRLNVALTRAKYGVIIVGNPKALSKQPLWNNLLNNYKEQKVLVEG 882
>gi|353241966|emb|CCA73744.1| related to regulator of nonsense transcripts 1 [Piriformospora
indica DSM 11827]
Length = 850
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 149/463 (32%), Positives = 231/463 (49%), Gaps = 63/463 (13%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVE---IILQEVKRGSKILACAASNIAV 253
L+ SQ AI+ + + ++ GPPGTGKT T++E I+ K +L C +N+AV
Sbjct: 326 LNASQTQAIALMFKER-LSLVQGPPGTGKTRTIIEALRILKSHFKVEHPLLVCTYTNVAV 384
Query: 254 DNIVERLVPHRVRLVRLG---------HPARLLPQVLESALDAQVLRGDNSSLASDIRKE 304
DN+VE + + +R+G HP P+V++ + +R + +R+E
Sbjct: 385 DNLVEGIADAGMNPLRVGNEGGAQMERHPR--WPEVVKIMNEIAQIR----QIRDRLRRE 438
Query: 305 MKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRK 364
M G + K + + ++ L + + K + + K+ADV+ TT A S
Sbjct: 439 M----GSAPSDQQKESISRLGNKIHLLRESKAKLESAMRYMIFKSADVICTTCITAGSSA 494
Query: 365 LDNTSFDLVIIDEAAQALEIACWIALLKGSRCI-LAGDHLQLPPTVQSVEAEKKGLGRTL 423
F +V +DEA+ + E A I L+ G + + L GDH QLPP + S A++ GLG++L
Sbjct: 495 FRMMDFPVVFLDEASMSTEPASLIPLMHGCKHLALIGDHKQLPPVITSELAKEGGLGKSL 554
Query: 424 FERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK---AHPSG------------ 468
FERL + G + ML QYRMH I + S + Y ++ P+G
Sbjct: 555 FERLIE-EGSVPSVMLDTQYRMHPSISAFPSDEFYGKALRDGTISPAGGVPATLAPPHSM 613
Query: 469 --VKRTSSTE---PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHAS 523
+R S P +L I + E +D + + E + A+ L+ G+
Sbjct: 614 HLARRKSKLTGEIPAVLFIH--HDNHEISRDRSRANLEEMKIVAAVLEDLLLMNPGLRGR 671
Query: 524 DIGIITPYAAQVVLLKILRSKDD----------------KLKNMEVSTVDGFQGREKEAI 567
DIGII+PY AQV +L + +D +L+++E+ TVDGF+GREKE I
Sbjct: 672 DIGIISPYVAQVRMLNKMLKEDSSWADAFRDALGDPRCHELQDVEIKTVDGFEGREKEII 731
Query: 568 IISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS 610
I S VR+NS +GFL+DRRRMNVA+TRA+R +V T+S
Sbjct: 732 IFSTVRNNSWGHIGFLADRRRMNVALTRAKRALFVVGSISTLS 774
>gi|350406741|ref|XP_003487867.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Bombus impatiens]
Length = 1108
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 195/657 (29%), Positives = 310/657 (47%), Gaps = 98/657 (14%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
++ ++ PL+ LE + D K+ T N++ V GL KT+ F
Sbjct: 274 QYQNIFGPLVKLEAD--------------YDKRLKESQTQENIE-VRWDVGLNKKTIAYF 318
Query: 77 Q--STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS---SITVAFDD--- 128
T GD+ H D + L+ +L P G G V ++ D+ + + +
Sbjct: 319 MLAKTDGDMKLMHG----DELRLR-YLGELHKPWSGIGHVIKIPDNYGEEVGIELKNNSG 373
Query: 129 IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKKD 187
P E +++ ++ + ++ RM+ AL + + V + +G I L G + VL +
Sbjct: 374 APTECVSN-FVVDFIWKSTSFDRMQLALRKFA--VDDTSVSGYIYHRLLGHEVEEVLFRC 430
Query: 188 IAFKPFNS----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSK 242
K F++ +L+ SQ A+ A+ + + ++ GPPGTGKT T I+ Q VK+ G
Sbjct: 431 HLPKHFSAPNLPDLNRSQVYAVKHAVQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQNGGP 489
Query: 243 ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR 302
+L CA SN AVD + E++ +++VRL +R A+D+ V
Sbjct: 490 VLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSR-------EAIDSPV------------- 529
Query: 303 KEMKALNGKLLKTKDKNTRREIQK------ELRTLSKEERKRQQL----AVTDVIKNADV 352
AL+ ++ K+ T E+QK E LS + KR +L A ++++ ADV
Sbjct: 530 -SFLALHNQI---KNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADV 585
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS 411
+ T GA +L F ++IDE+ QA E C + ++ G++ IL GDH QL P V
Sbjct: 586 ICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMC 645
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
+A + GL ++LFERL L L VQYRMH + + S Y ++ +GV
Sbjct: 646 KKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQ---NGV-- 698
Query: 472 TSSTEPTLLLIDIAGC------------DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG 519
+ E LL ID EE S +N EA A R ++ G
Sbjct: 699 -CADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCG 757
Query: 520 VHASDIGIITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRS 574
V IG+ITPY Q V ++ S KL + +EV++VD FQGREK+ II+S VRS
Sbjct: 758 VKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRS 817
Query: 575 NSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
N + +GFL+D RR+NVA+TRA+ +V + + +S L+ +++E + G
Sbjct: 818 NEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEG 874
>gi|340721323|ref|XP_003399072.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Bombus terrestris]
Length = 1108
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 195/657 (29%), Positives = 310/657 (47%), Gaps = 98/657 (14%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
++ ++ PL+ LE + D K+ T N++ V GL KT+ F
Sbjct: 274 QYQNIFGPLVKLEAD--------------YDKRLKESQTQENIE-VRWDVGLNKKTIAYF 318
Query: 77 Q--STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS---SITVAFDD--- 128
T GD+ H D + L+ +L P G G V ++ D+ + + +
Sbjct: 319 MLAKTDGDMKLMHG----DELRLR-YLGELHKPWSGIGHVIKIPDNYGEEVGIELKNNSG 373
Query: 129 IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKKD 187
P E +++ ++ + ++ RM+ AL + + V + +G I L G + VL +
Sbjct: 374 APTECVSN-FVVDFIWKSTSFDRMQLALRKFA--VDDTSVSGYIYHRLLGHEVEEVLFRC 430
Query: 188 IAFKPFNS----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSK 242
K F++ +L+ SQ A+ A+ + + ++ GPPGTGKT T I+ Q VK+ G
Sbjct: 431 HLPKHFSAPNLPDLNRSQVYAVKHAVQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQNGGP 489
Query: 243 ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIR 302
+L CA SN AVD + E++ +++VRL +R A+D+ V
Sbjct: 490 VLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSR-------EAIDSPV------------- 529
Query: 303 KEMKALNGKLLKTKDKNTRREIQK------ELRTLSKEERKRQQL----AVTDVIKNADV 352
AL+ ++ K+ T E+QK E LS + KR +L A ++++ ADV
Sbjct: 530 -SFLALHNQI---KNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADV 585
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS 411
+ T GA +L F ++IDE+ QA E C + ++ G++ IL GDH QL P V
Sbjct: 586 ICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMC 645
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
+A + GL ++LFERL L L VQYRMH + + S Y ++ +GV
Sbjct: 646 KKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQ---NGV-- 698
Query: 472 TSSTEPTLLLIDIAGC------------DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG 519
+ E LL ID EE S +N EA A R ++ G
Sbjct: 699 -CADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCG 757
Query: 520 VHASDIGIITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRS 574
V IG+ITPY Q V ++ S KL + +EV++VD FQGREK+ II+S VRS
Sbjct: 758 VKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRS 817
Query: 575 NSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
N + +GFL+D RR+NVA+TRA+ +V + + +S L+ +++E + G
Sbjct: 818 NEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEG 874
>gi|323336281|gb|EGA77552.1| Nam7p [Saccharomyces cerevisiae Vin13]
Length = 930
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 274/561 (48%), Gaps = 73/561 (13%)
Query: 110 GQGVVYRLKDSSITVAFDDI-----------PEEGLNSPLRLEKLANEVTYRRMKDALIQ 158
G+G + RL +S F D P L + E + +Y RM+DAL +
Sbjct: 313 GRGYIVRLPNS-----FQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKK 367
Query: 159 LSKGVQNGPAAGLIPV-LFGEQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSK 212
+ + +G + + G Q + L K+ + F + L+ SQ +A+S L +
Sbjct: 368 FA--IDKKSISGYLYYKILGHQVVDISFDVPLPKEFSIPNF-AQLNSSQSNAVSHVLQ-R 423
Query: 213 NVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLG 271
+ ++ GPPGTGKT T I+ K +IL CA SN+AVD++ +L +++VRL
Sbjct: 424 PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLT 483
Query: 272 HPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTL 331
+R + +ES++ N +L + + + K LLK KD E+ L
Sbjct: 484 AKSR---EDVESSVS-------NLALHNLVGRGAKGELKNLLKLKD---------EVGEL 524
Query: 332 SKEERKRQQLAV----TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACW 387
S + KR V +++ ADVV T GA ++LD T F V+IDE+ QA E C
Sbjct: 525 SASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRLD-TKFRTVLIDESTQASEPECL 583
Query: 388 IALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMH 446
I ++KG++ IL GDH QL P + +A GL ++LFERL L V L VQYRM+
Sbjct: 584 IPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL--GHVPIRLEVQYRMN 641
Query: 447 EHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT---------LLLIDIAGCDMEEKKDEED 497
++ + S Y ++ +GV T P + ++ A EE
Sbjct: 642 PYLSEFPSNMFYEGSLQ---NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGT 698
Query: 498 STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILR-----SKDDKLKNM 551
S +N EA +L + GV IG+ITPY Q +L+ ++ KD +K +
Sbjct: 699 SFLNRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIK-V 757
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
EV++VD FQGREK+ II+S VR+N ++ +GFL D RR+NV +TRA+ ++ + +++
Sbjct: 758 EVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLAR 817
Query: 612 DGFLKRLIEYFEEHAEYLSGS 632
+ L+ +F E + G+
Sbjct: 818 NTLWNHLLIHFREKGCLVEGT 838
>gi|323332050|gb|EGA73461.1| Nam7p [Saccharomyces cerevisiae AWRI796]
Length = 930
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 274/561 (48%), Gaps = 73/561 (13%)
Query: 110 GQGVVYRLKDSSITVAFDDI-----------PEEGLNSPLRLEKLANEVTYRRMKDALIQ 158
G+G + RL +S F D P L + E + +Y RM+DAL +
Sbjct: 313 GRGYIVRLPNS-----FQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKK 367
Query: 159 LSKGVQNGPAAGLIPV-LFGEQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSK 212
+ + +G + + G Q + L K+ + F + L+ SQ +A+S L +
Sbjct: 368 FA--IDKKSISGYLYYKILGHQVVDISFDVPLPKEFSIPNF-AQLNSSQSNAVSHVLQ-R 423
Query: 213 NVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLG 271
+ ++ GPPGTGKT T I+ K +IL CA SN+AVD++ +L +++VRL
Sbjct: 424 PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLT 483
Query: 272 HPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTL 331
+R + +ES++ N +L + + + K LLK KD E+ L
Sbjct: 484 AKSR---EDVESSVS-------NLALHNLVGRGAKGELKNLLKLKD---------EVGEL 524
Query: 332 SKEERKRQQLAV----TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACW 387
S + KR V +++ ADVV T GA ++LD T F V+IDE+ QA E C
Sbjct: 525 SASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRLD-TKFRTVLIDESTQASEPECL 583
Query: 388 IALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMH 446
I ++KG++ IL GDH QL P + +A GL ++LFERL L V L VQYRM+
Sbjct: 584 IPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL--GHVPIRLEVQYRMN 641
Query: 447 EHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT---------LLLIDIAGCDMEEKKDEED 497
++ + S Y ++ +GV T P + ++ A EE
Sbjct: 642 PYLSEFPSNMFYEGSLQ---NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGT 698
Query: 498 STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILR-----SKDDKLKNM 551
S +N EA +L + GV IG+ITPY Q +L+ ++ KD +K +
Sbjct: 699 SFLNRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIK-V 757
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
EV++VD FQGREK+ II+S VR+N ++ +GFL D RR+NV +TRA+ ++ + +++
Sbjct: 758 EVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLAR 817
Query: 612 DGFLKRLIEYFEEHAEYLSGS 632
+ L+ +F E + G+
Sbjct: 818 NTLWNHLLIHFREKGCLVEGT 838
>gi|395331022|gb|EJF63404.1| hypothetical protein DICSQDRAFT_102653 [Dichomitus squalens LYAD-421
SS1]
Length = 1922
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 166/512 (32%), Positives = 254/512 (49%), Gaps = 98/512 (19%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSK------------- 242
N++ Q +AI K+L ++ ++ GPPGTGKT+T+ ++ + R SK
Sbjct: 1275 NVNEPQANAILKSLDTEGFALIQGPPGTGKTSTICGLVQLYLSRRSKTIGRPGDKEIPKK 1334
Query: 243 ILACAASNIAVDNIVERL------VPHRV---RLVRLGHPARL----------------- 276
IL CA SN A+D I RL HR ++VR+G P +
Sbjct: 1335 ILLCAPSNAAIDEIAFRLKEGVSGAGHRAEHPKVVRIGAPKAMNLSVRDVSLEYLMDQKL 1394
Query: 277 --LPQV----------------LESA-------LDAQVLRGDNSS----LASDIRKEMKA 307
P++ LES +D L DN++ L DI+K +A
Sbjct: 1395 NAHPELQNTKEAGTELARVRAELESVKVQRQQKMDEMALTHDNAAKTLALEDDIKKLNRA 1454
Query: 308 ---LNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRK 364
L +L K KDK + + RTL R+ + +V++ ADV+ +TL+ +
Sbjct: 1455 KAMLTHQLDKVKDKQ-----KSDYRTLDATRRRFR----NEVLQEADVICSTLSASAYEY 1505
Query: 365 LDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTL 423
L++ F++VIIDEAAQA+E++ I + R CI+ GD QLPPTV+S EA + G ++L
Sbjct: 1506 LESFDFEVVIIDEAAQAIELSSLIPMKYRCRTCIMVGDPQQLPPTVKSQEACRLGYDQSL 1565
Query: 424 FERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHP---SGVKRTSSTEP--- 477
F RL D V +L++QYRMH I S Y+ ++ P + KR P
Sbjct: 1566 FVRLQKSQPDAV-HLLSIQYRMHPDISQLPSNLFYDGRLSDGPEMAAKTKRPWHNHPKFG 1624
Query: 478 TLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD----IGIITPYAA 533
T + E S +N EA+VA+A RLI+ ++D +G+I+ Y
Sbjct: 1625 TYRFFSVESGTEENMPGTGHSLVNRSEAQVAVALYNRLIKE-FSSTDFDFKVGVISMYRG 1683
Query: 534 QVVLLKIL---RSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSN-SKKEVGFLSDRRRM 589
Q+V LK R ++ L ++ +TVDGFQG+EK+ II+S VRS S + VGFL D RRM
Sbjct: 1684 QIVELKRAFRQRFGEEVLSTVDFNTVDGFQGQEKDIIILSCVRSGPSLQTVGFLRDVRRM 1743
Query: 590 NVAVTRARRQCCLVCDTETVS-SDGFLKRLIE 620
NVA+TRA+ ++ + T+ SD +++++
Sbjct: 1744 NVALTRAKASLFVLGNAPTLERSDDIWRKIVD 1775
>gi|151946238|gb|EDN64469.1| nuclear accommodation of mitochondria [Saccharomyces cerevisiae
YJM789]
Length = 971
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 274/561 (48%), Gaps = 73/561 (13%)
Query: 110 GQGVVYRLKDSSITVAFDDI-----------PEEGLNSPLRLEKLANEVTYRRMKDALIQ 158
G+G + RL +S F D P L + E + +Y RM+DAL +
Sbjct: 313 GRGYIVRLPNS-----FQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKK 367
Query: 159 LSKGVQNGPAAGLIPV-LFGEQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSK 212
+ + +G + + G Q + L K+ + F + L+ SQ +A+S L +
Sbjct: 368 FA--IDKKSISGYLYYKILGHQVVDISFDVPLPKEFSIPNF-AQLNSSQSNAVSHVLQ-R 423
Query: 213 NVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLG 271
+ ++ GPPGTGKT T I+ K +IL CA SN+AVD++ +L +++VRL
Sbjct: 424 PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLT 483
Query: 272 HPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTL 331
+R + +ES++ N +L + + + K LLK KD E+ L
Sbjct: 484 AKSR---EDVESSVS-------NLALHNLVGRGAKGELKNLLKLKD---------EVGEL 524
Query: 332 SKEERKRQQLAV----TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACW 387
S + KR V +++ ADVV T GA ++LD T F V+IDE+ QA E C
Sbjct: 525 SASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRLD-TKFRTVLIDESTQASEPECL 583
Query: 388 IALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMH 446
I ++KG++ IL GDH QL P + +A GL ++LFERL L V L VQYRM+
Sbjct: 584 IPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL--GHVPIRLEVQYRMN 641
Query: 447 EHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT---------LLLIDIAGCDMEEKKDEED 497
++ + S Y ++ +GV T P + ++ A EE
Sbjct: 642 PYLSEFPSNMFYEGSLQ---NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGT 698
Query: 498 STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILR-----SKDDKLKNM 551
S +N EA +L + GV IG+ITPY Q +L+ ++ KD +K +
Sbjct: 699 SFLNRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIK-V 757
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
EV++VD FQGREK+ II+S VR+N ++ +GFL D RR+NV +TRA+ ++ + +++
Sbjct: 758 EVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLAR 817
Query: 612 DGFLKRLIEYFEEHAEYLSGS 632
+ L+ +F E + G+
Sbjct: 818 NTLWNHLLIHFREKGCLVEGT 838
>gi|432854578|ref|XP_004067970.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Oryzias latipes]
Length = 1093
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 145/449 (32%), Positives = 228/449 (50%), Gaps = 30/449 (6%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 443 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLSRQGNGPVLVCAPSNIAVD 501
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
+ E++ +++VRL +R + +ES + L S++ D E++ KL +
Sbjct: 502 QLTEKIDKTGLKVVRLCAKSR---EAIESPVSFLALHNQISNM--DSMPELQ----KLQQ 552
Query: 315 TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVI 374
KD+ E K R ++ A +++ NADV+ T GA +L F ++
Sbjct: 553 LKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSIL 607
Query: 375 IDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGD 433
IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 608 IDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIR 667
Query: 434 EVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIAGC 487
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 668 PIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRIKKGFDFQWPQPDKPMFFYVTQ 725
Query: 488 DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKILRS 543
EE S +N EA RL+++G IGIITPY Q V ++ S
Sbjct: 726 GQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGS 785
Query: 544 KDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCL 602
KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRA+ +
Sbjct: 786 LHTKLYQQVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAKYGVII 845
Query: 603 VCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
V + + +S L+ ++E + G
Sbjct: 846 VGNPKALSKQPLWNNLLNNYKEQKVLVEG 874
>gi|260950771|ref|XP_002619682.1| hypothetical protein CLUG_00841 [Clavispora lusitaniae ATCC 42720]
gi|238847254|gb|EEQ36718.1| hypothetical protein CLUG_00841 [Clavispora lusitaniae ATCC 42720]
Length = 967
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 148/460 (32%), Positives = 237/460 (51%), Gaps = 49/460 (10%)
Query: 195 SNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAV 253
S L+ SQ+ A++ A++S + ++ GPPGTGKT T I+ + V+ R S++L CA SN+AV
Sbjct: 428 SALNASQRAAVAHAIASP-LTLIQGPPGTGKTVTSAAIVRELVRLRRSRVLVCAPSNVAV 486
Query: 254 DNIVERLVPHRVRLVRLGHPAR--LLPQVLESALDAQVLRGDNSSLASDIRK--EMKALN 309
D++ +L +++VRL +R + + AL QV +++ +R + +A
Sbjct: 487 DHLALKLRAAGLKVVRLAARSREDIESEATPLALHTQV----RAAIPRRVRTLVDKQASG 542
Query: 310 GKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS 369
G+L D + I + R ++ +I +ADV+ TT GA R+L+
Sbjct: 543 GEL----DARAKARIARSWRAAEQK-----------LISSADVICTTCVGADDRRLEEYE 587
Query: 370 FDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
F +V++DE+ QA E I + +G++ +L GDH QL P V A GL R+LFERL
Sbjct: 588 FPIVLVDESTQATEPEALIPITRGAKQVVLVGDHQQLGPVVLDPAASAAGLRRSLFERLV 647
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTL--------- 479
+ V L VQYRMH + ++S Y + +GV T P
Sbjct: 648 SM--GHVPLRLEVQYRMHPALSEFASNMFYEGSLL---NGVTSDDRTRPGADFPWPVPDR 702
Query: 480 LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL- 538
++ A EE S +N EA RL++ GV IG+ITPY Q V +
Sbjct: 703 PMMFWANYGKEEIGANGSSYLNRVEAMNVDKIIARLVRDGVSPDQIGVITPYEGQRVYIW 762
Query: 539 -------KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNV 591
+ +S ++L+ +EVS+VD FQGREK+ II+S VR+N +++GFL D RR+NV
Sbjct: 763 QYLKLNSTVPKSALNELE-VEVSSVDAFQGREKDYIILSCVRANEDRDIGFLKDSRRLNV 821
Query: 592 AVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
A+TRA+ ++ + ++S + L+ ++ E + G
Sbjct: 822 ALTRAKFGLIILGNPRSLSKNKLWNSLLVHYRERGCLVEG 861
>gi|307207583|gb|EFN85248.1| Regulator of nonsense transcripts 1 [Harpegnathos saltator]
Length = 1108
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 192/655 (29%), Positives = 304/655 (46%), Gaps = 94/655 (14%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
++ ++ PL+ LE + D K+ T N++ V GL K + F
Sbjct: 272 QYQNIFGPLVKLEAD--------------YDKRLKESQTQENIE-VRWDVGLNKKIIAYF 316
Query: 77 Q--STKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS-----SITVAFDDI 129
T GD+ H D + L+ +L P G G V ++ D+ I + +
Sbjct: 317 MLAKTDGDMKLMHG----DELRLR-YLGELHKPWSGIGHVIKIPDNYGEEVGIELKNNSG 371
Query: 130 PEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIA 189
NS ++ + ++ RM+ AL + + + +A + L G + VL +
Sbjct: 372 APTECNSNFVVDFIWKSTSFDRMQSALRKFAVD-DSSVSAYIYHRLLGHEVEEVLFRCHL 430
Query: 190 FKPFNS----NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSKIL 244
K F++ +L+ SQ A+ A+ + + ++ GPPGTGKT T I+ Q VK+ G +L
Sbjct: 431 PKHFSAPNLPDLNRSQVYAVKHAVQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVL 489
Query: 245 ACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKE 304
CA SN AVD + E++ +++VRL +R A+D+ V
Sbjct: 490 VCAPSNTAVDQLTEKIHKSNLKVVRLCAKSR-------EAIDSPV--------------S 528
Query: 305 MKALNGKLLKTKDKNTRREIQK------ELRTLSKEERKRQQL----AVTDVIKNADVVL 354
AL+ ++ K+ T E+QK E LS + KR +L A ++++ ADV+
Sbjct: 529 FLALHNQI---KNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVIC 585
Query: 355 TTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVE 413
T GA +L F ++IDE+ QA E C + ++ G++ IL GDH QL P V +
Sbjct: 586 CTCVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKK 645
Query: 414 AEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS 473
A + GL ++LFERL L L VQYRMH + + S Y ++ +GV
Sbjct: 646 AARAGLSQSLFERLVVLGIRPFR--LEVQYRMHPDLSRFPSNFFYEGSLQ---NGV---C 697
Query: 474 STEPTLLLIDIAGC------------DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVH 521
+ E LL ID EE S +N EA R ++ GV
Sbjct: 698 ADERKLLKIDFPWPVQDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVK 757
Query: 522 ASDIGIITPYAAQVVLL----KILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNS 576
+ IG+ITPY Q L + S KL + +EV++VD FQGREK+ II+S VRSN
Sbjct: 758 SEQIGVITPYEGQRAFLVQHMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNE 817
Query: 577 KKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+ +GFL+D RR+NVA+TRA+ +V + + +S L+ +++E + G
Sbjct: 818 HQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQALWNHLLNFYKEQKVLVEG 872
>gi|349580361|dbj|GAA25521.1| K7_Nam7p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 971
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 274/561 (48%), Gaps = 73/561 (13%)
Query: 110 GQGVVYRLKDSSITVAFDDI-----------PEEGLNSPLRLEKLANEVTYRRMKDALIQ 158
G+G + RL +S F D P L + E + +Y RM+DAL +
Sbjct: 313 GRGYIVRLPNS-----FQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKK 367
Query: 159 LSKGVQNGPAAGLIPV-LFGEQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSK 212
+ + +G + + G Q + L K+ + F + L+ SQ +A+S L +
Sbjct: 368 FA--IDKKSISGYLYYKILGHQVVDISFDVPLPKEFSIPNF-AQLNSSQSNAVSHVLQ-R 423
Query: 213 NVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLG 271
+ ++ GPPGTGKT T I+ K +IL CA SN+AVD++ +L +++VRL
Sbjct: 424 PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLT 483
Query: 272 HPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTL 331
+R + +ES++ N +L + + + K LLK KD E+ L
Sbjct: 484 AKSR---EDVESSVS-------NLALHNLVGRGAKGELKNLLKLKD---------EVGEL 524
Query: 332 SKEERKRQQLAV----TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACW 387
S + KR V +++ ADVV T GA ++LD T F V+IDE+ QA E C
Sbjct: 525 SASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRLD-TKFRTVLIDESTQASEPECL 583
Query: 388 IALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMH 446
I ++KG++ IL GDH QL P + +A GL ++LFERL L V L VQYRM+
Sbjct: 584 IPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL--GHVPIRLEVQYRMN 641
Query: 447 EHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT---------LLLIDIAGCDMEEKKDEED 497
++ + S Y ++ +GV T P + ++ A EE
Sbjct: 642 PYLSEFPSNMFYEGSLQ---NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGT 698
Query: 498 STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILR-----SKDDKLKNM 551
S +N EA +L + GV IG+ITPY Q +L+ ++ KD +K +
Sbjct: 699 SFLNRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIK-V 757
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
EV++VD FQGREK+ II+S VR+N ++ +GFL D RR+NV +TRA+ ++ + +++
Sbjct: 758 EVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLAR 817
Query: 612 DGFLKRLIEYFEEHAEYLSGS 632
+ L+ +F E + G+
Sbjct: 818 NTLWNHLLIHFREKGCLVEGT 838
>gi|146163349|ref|XP_001011272.2| hypothetical protein TTHERM_00146330 [Tetrahymena thermophila]
gi|146146126|gb|EAR91027.2| hypothetical protein TTHERM_00146330 [Tetrahymena thermophila SB210]
Length = 1186
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 146/444 (32%), Positives = 229/444 (51%), Gaps = 60/444 (13%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQ------EVKRGSKILACAASN 250
L+ SQ AI +LS KN+ ++ GPPGTGKT T +++L+ + ++ KIL CA SN
Sbjct: 750 LNQSQLQAIQSSLS-KNISLIQGPPGTGKTETAAQLVLEIWYKINKNQQNEKILVCAPSN 808
Query: 251 IAVDNIVERLVPHR--VRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKAL 308
+A DNI +R+ ++++R+ AR +V D VL
Sbjct: 809 LAADNISDRIHAQNREIKVIRIVSQARQRVKVSYQFQDI-VLH----------------- 850
Query: 309 NGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNT 368
K+LK + + + K + L I+NADV+ TT +V + +
Sbjct: 851 --KVLKKEGFFNKNSVLKRAKQL---------------IENADVICTTCINSVDKFIKGI 893
Query: 369 SFDLVIIDEAAQALEIACWIALL-KGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERL 427
SF V+IDEA QA+E I L + + IL GDH QLPP + S++A K GL R+LF RL
Sbjct: 894 SFSTVVIDEANQAIEPETIIPLQHQAKKLILIGDHKQLPPIILSIQASKDGLKRSLFSRL 953
Query: 428 ADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLL------- 480
+ L++QYRMH I +S Y +++K + RT + + L
Sbjct: 954 VQ--AGLIPQFLSIQYRMHPEIRKLASSIFYQNQLKDGVNEQDRTPTPKFNWLNNKIPIQ 1011
Query: 481 LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKI 540
D+ G E + S +NE EA++ + +LIQ+GV +DIGIITPY +Q +
Sbjct: 1012 FYDVQG--QEITLQDGKSFINEEEAKLVKSLVSQLIQAGVKDNDIGIITPYLSQSNYI-- 1067
Query: 541 LRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S+ K N+ + T FQG+E++ IIIS VR N+ + +G L + +NV++TRA+R
Sbjct: 1068 --SQLIKNSNILIDTTYSFQGQERDYIIISCVRINNFQNLGILRTPQLINVSITRAKRGL 1125
Query: 601 CLVCDTETVSSDGFLKRLIEYFEE 624
+V + + VS + K++I+Y ++
Sbjct: 1126 LIVGNKKHVSYSRWWKQIIDYLDK 1149
>gi|256273504|gb|EEU08438.1| Nam7p [Saccharomyces cerevisiae JAY291]
Length = 971
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 274/561 (48%), Gaps = 73/561 (13%)
Query: 110 GQGVVYRLKDSSITVAFDDI-----------PEEGLNSPLRLEKLANEVTYRRMKDALIQ 158
G+G + RL +S F D P L + E + +Y RM+DAL +
Sbjct: 313 GRGYIVRLPNS-----FQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKK 367
Query: 159 LSKGVQNGPAAGLIPV-LFGEQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSK 212
+ + +G + + G Q + L K+ + F + L+ SQ +A+S L +
Sbjct: 368 FA--IDKKSISGYLYYKILGHQVVDISFDVPLPKEFSIPNF-AQLNSSQSNAVSHVLQ-R 423
Query: 213 NVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLG 271
+ ++ GPPGTGKT T I+ K +IL CA SN+AVD++ +L +++VRL
Sbjct: 424 PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLT 483
Query: 272 HPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTL 331
+R + +ES++ N +L + + + K LLK KD E+ L
Sbjct: 484 AKSR---EDVESSVS-------NLALHNLVGRGAKGELKNLLKLKD---------EVGEL 524
Query: 332 SKEERKRQQLAV----TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACW 387
S + KR V +++ ADVV T GA ++LD T F V+IDE+ QA E C
Sbjct: 525 SASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRLD-TKFRTVLIDESTQASEPECL 583
Query: 388 IALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMH 446
I ++KG++ IL GDH QL P + +A GL ++LFERL L V L VQYRM+
Sbjct: 584 IPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL--GHVPIRLEVQYRMN 641
Query: 447 EHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT---------LLLIDIAGCDMEEKKDEED 497
++ + S Y ++ +GV T P + ++ A EE
Sbjct: 642 PYLSEFPSNMFYEGSLQ---NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGT 698
Query: 498 STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILR-----SKDDKLKNM 551
S +N EA +L + GV IG+ITPY Q +L+ ++ KD +K +
Sbjct: 699 SFLNRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIK-V 757
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
EV++VD FQGREK+ II+S VR+N ++ +GFL D RR+NV +TRA+ ++ + +++
Sbjct: 758 EVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLAR 817
Query: 612 DGFLKRLIEYFEEHAEYLSGS 632
+ L+ +F E + G+
Sbjct: 818 NTLWNHLLIHFREKGCLVEGT 838
>gi|406695570|gb|EKC98873.1| hypothetical protein A1Q2_06844 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1000
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 161/497 (32%), Positives = 248/497 (49%), Gaps = 60/497 (12%)
Query: 148 TYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK---PFNSNLDHSQKDA 204
++ RM+ A+ + + +G I +L E P VL+ + + P L+HSQ A
Sbjct: 350 SFDRMQQAMKTFA--IDEKSVSGYI-LLGHEVDPQVLRTQMPKRFTAPGLPELNHSQMAA 406
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDNIVERLVPH 263
+ KA+ K + ++ GPPGTGKT T I+ K ++L CA SN+AVD++ E++
Sbjct: 407 V-KAVLQKPLSLIQGPPGTGKTVTSASIVYHLSKMNPGQVLVCAPSNVAVDHLAEKIHMT 465
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
+++VRL +R A+D+ V L+ ++ K +TRRE
Sbjct: 466 GLKVVRLTAKSR-------EAVDSPV--------------SYLTLHEQVAKN---DTRRE 501
Query: 324 IQK------ELRTLSK-EERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDLV 373
+QK EL LS+ +ERK + L D++ ADV+ TT GA +L F V
Sbjct: 502 LQKLIQLRNELGELSQSDERKYKSLVRACEKDILNAADVICTTCVGAGDPRLAKFKFRTV 561
Query: 374 IIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG 432
++DEA QA E I L+ G + +L GDH QL P + + +A + GL ++LFERL L
Sbjct: 562 LVDEATQAAEPEAMIPLVMGCKQAVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVILGN 621
Query: 433 DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR--------TSSTEPTLLLIDI 484
+ L VQYRMH + + S Y ++ + +R + ++
Sbjct: 622 RPIR--LQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVADTPMMFHQN 679
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ---VVLLKIL 541
G EE S +N EA + +SGV S IG+ITPY Q +V L
Sbjct: 680 TGT--EEISSSGTSFVNRTEAANVEKMVTKFFKSGVLPSQIGVITPYEGQRSFIVSYMQL 737
Query: 542 RS--KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 599
K D K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRA+
Sbjct: 738 HGALKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYG 797
Query: 600 CCLVCDTETVSSDGFLK 616
++ + + +S ++
Sbjct: 798 VVILGNPKVLSKPSMMQ 814
>gi|348523131|ref|XP_003449077.1| PREDICTED: regulator of nonsense transcripts 1-like [Oreochromis
niloticus]
Length = 1101
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 146/453 (32%), Positives = 229/453 (50%), Gaps = 30/453 (6%)
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASN 250
P +L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++G+ +L CA SN
Sbjct: 448 PGLPDLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLSRQGNGPVLVCAPSN 506
Query: 251 IAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG 310
IAVD + E++ +++VRL +R + +ES + L S++ D E++
Sbjct: 507 IAVDQLTEKIDKTGLKVVRLCAKSR---EAIESPVSFLALHNQISNM--DSMPELQ---- 557
Query: 311 KLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
KL + KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 558 KLQQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQF 612
Query: 371 DLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL
Sbjct: 613 RSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVV 672
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLID 483
L + L VQYRMH + + S Y ++ + R +P +
Sbjct: 673 LGIRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRIKKGFDFQWPQPDKPMFF 730
Query: 484 IAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLK 539
EE S +N EA RL+++G IGIITPY Q V ++
Sbjct: 731 YVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQYMQ 790
Query: 540 ILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARR 598
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRA+
Sbjct: 791 FSGSLHTKLYQQVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAKY 850
Query: 599 QCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ ++E + G
Sbjct: 851 GVIIVGNPKALSKQPLWNNLLNNYKEQKVLVEG 883
>gi|327200469|pdb|2XZL|A Chain A, Upf1-Rna Complex
Length = 802
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 274/561 (48%), Gaps = 73/561 (13%)
Query: 110 GQGVVYRLKDSSITVAFDDI-----------PEEGLNSPLRLEKLANEVTYRRMKDALIQ 158
G+G + RL +S F D P L + E + +Y RM+DAL +
Sbjct: 265 GRGYIVRLPNS-----FQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKK 319
Query: 159 LSKGVQNGPAAGLIPV-LFGEQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSK 212
+ + +G + + G Q + L K+ + F + L+ SQ +A+S L +
Sbjct: 320 FA--IDKKSISGYLYYKILGHQVVDISFDVPLPKEFSIPNF-AQLNSSQSNAVSHVLQ-R 375
Query: 213 NVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLG 271
+ ++ GPPGTGKT T I+ K +IL CA SN+AVD++ +L +++VRL
Sbjct: 376 PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLT 435
Query: 272 HPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTL 331
+R + +ES++ N +L + + + K LLK KD E+ L
Sbjct: 436 AKSR---EDVESSVS-------NLALHNLVGRGAKGELKNLLKLKD---------EVGEL 476
Query: 332 SKEERKRQQLAV----TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACW 387
S + KR V +++ ADVV T GA ++LD T F V+IDE+ QA E C
Sbjct: 477 SASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRLD-TKFRTVLIDESTQASEPECL 535
Query: 388 IALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMH 446
I ++KG++ IL GDH QL P + +A GL ++LFERL L V L VQYRM+
Sbjct: 536 IPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL--GHVPIRLEVQYRMN 593
Query: 447 EHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT---------LLLIDIAGCDMEEKKDEED 497
++ + S Y ++ +GV T P + ++ A EE
Sbjct: 594 PYLSEFPSNMFYEGSLQ---NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGT 650
Query: 498 STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILR-----SKDDKLKNM 551
S +N EA +L + GV IG+ITPY Q +L+ ++ KD +K +
Sbjct: 651 SFLNRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIK-V 709
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
EV++VD FQGREK+ II+S VR+N ++ +GFL D RR+NV +TRA+ ++ + +++
Sbjct: 710 EVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLAR 769
Query: 612 DGFLKRLIEYFEEHAEYLSGS 632
+ L+ +F E + G+
Sbjct: 770 NTLWNHLLIHFREKGCLVEGT 790
>gi|303275724|ref|XP_003057156.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461508|gb|EEH58801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1100
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/445 (31%), Positives = 234/445 (52%), Gaps = 36/445 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+HSQ +A++ L + + ++ GPPGTGKT T I+ ++ +++ CA SN+AVD
Sbjct: 474 LNHSQVNAVASVLR-RPLSLIQGPPGTGKTVTSATIVYHLAQQNQGQVIVCAPSNVAVDQ 532
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VR+ +R + + S ++ L + L S E+ L
Sbjct: 533 LAEKIEQTGLKVVRVAAKSR---EAVLSPVEHLTLHYQVAHLDSPEHAELAKL------- 582
Query: 316 KDKNTRREIQKELRTLS-KEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFD 371
++++ EL LS +ERK + L +++++ADVV TT GA +L N F
Sbjct: 583 ------QQLKDELGELSSNDERKYRALKRATEREILQSADVVCTTAVGAGDPRLANFRFR 636
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V++DE+ QA E C I L+ G++ ++ GDH QL P V +A + GLG++LFERL L
Sbjct: 637 QVLMDESTQATEPECLIPLIMGAKQVVMVGDHCQLGPVVACKKAARAGLGQSLFERLILL 696
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDI 484
+ L VQYRMH + + S Y ++ + +R + +P+ ++
Sbjct: 697 GVQPIR--LQVQYRMHPCLSEFPSNTFYEGALQNGVAAAERLMTHVNFPWPKPSTPMMFW 754
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ--VVLLKILR 542
+ EE S +N EA +++GV +G++TPY Q V+ + R
Sbjct: 755 SMTGAEEISASGTSYLNRTEAVSVEKIVTHFLRAGVAPEALGVVTPYEGQRAYVVQHMTR 814
Query: 543 S---KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 599
+ + ++V++VD FQGREK+ II+S VRSN K +GFL+D RR+NVA+TRAR
Sbjct: 815 AGVLRQQLYNEIQVASVDSFQGREKDFIILSCVRSNEKAGIGFLNDPRRLNVAMTRARSG 874
Query: 600 CCLVCDTETVSSDGFLKRLIEYFEE 624
++ + + +S L+++F +
Sbjct: 875 LVILGNPKVLSRQPLFHDLLQHFRD 899
>gi|190408311|gb|EDV11576.1| helicase [Saccharomyces cerevisiae RM11-1a]
Length = 971
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 274/561 (48%), Gaps = 73/561 (13%)
Query: 110 GQGVVYRLKDSSITVAFDDI-----------PEEGLNSPLRLEKLANEVTYRRMKDALIQ 158
G+G + RL +S F D P L + E + +Y RM+DAL +
Sbjct: 313 GRGYIVRLPNS-----FQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKK 367
Query: 159 LSKGVQNGPAAGLIPV-LFGEQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSK 212
+ + +G + + G Q + L K+ + F + L+ SQ +A+S L +
Sbjct: 368 FA--IDKKSISGYLYYKILGHQVVDISFDVPLPKEFSIPNF-AQLNSSQSNAVSHVLQ-R 423
Query: 213 NVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLG 271
+ ++ GPPGTGKT T I+ K +IL CA SN+AVD++ +L +++VRL
Sbjct: 424 PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLT 483
Query: 272 HPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTL 331
+R + +ES++ N +L + + + K LLK KD E+ L
Sbjct: 484 AKSR---EDVESSVS-------NLALHNLVGRGAKGELKNLLKLKD---------EVGEL 524
Query: 332 SKEERKRQQLAV----TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACW 387
S + KR V +++ ADVV T GA ++LD T F V+IDE+ QA E C
Sbjct: 525 SASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRLD-TKFRTVLIDESTQASEPECL 583
Query: 388 IALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMH 446
I ++KG++ IL GDH QL P + +A GL ++LFERL L V L VQYRM+
Sbjct: 584 IPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL--GHVPIRLEVQYRMN 641
Query: 447 EHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT---------LLLIDIAGCDMEEKKDEED 497
++ + S Y ++ +GV T P + ++ A EE
Sbjct: 642 PYLSEFPSNMFYEGSLQ---NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGT 698
Query: 498 STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILR-----SKDDKLKNM 551
S +N EA +L + GV IG+ITPY Q +L+ ++ KD +K +
Sbjct: 699 SFLNRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIK-V 757
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
EV++VD FQGREK+ II+S VR+N ++ +GFL D RR+NV +TRA+ ++ + +++
Sbjct: 758 EVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLAR 817
Query: 612 DGFLKRLIEYFEEHAEYLSGS 632
+ L+ +F E + G+
Sbjct: 818 NTLWNHLLIHFREKGCLVEGT 838
>gi|6323726|ref|NP_013797.1| ATP-dependent RNA helicase NAM7 [Saccharomyces cerevisiae S288c]
gi|400350|sp|P30771.1|NAM7_YEAST RecName: Full=ATP-dependent helicase NAM7; AltName:
Full=Nonsense-mediated mRNA decay protein 1; AltName:
Full=Nuclear accommodation of mitochondria 7 protein;
AltName: Full=Up-frameshift suppressor 1
gi|4023|emb|CAA44266.1| helicase [Saccharomyces cerevisiae]
gi|173142|gb|AAA35197.1| zinc finger protein [Saccharomyces cerevisiae]
gi|807962|emb|CAA89226.1| Nam7p [Saccharomyces cerevisiae]
gi|207342353|gb|EDZ70140.1| YMR080Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259148654|emb|CAY81899.1| Nam7p [Saccharomyces cerevisiae EC1118]
gi|285814083|tpg|DAA09978.1| TPA: ATP-dependent RNA helicase NAM7 [Saccharomyces cerevisiae
S288c]
gi|323353063|gb|EGA85363.1| Nam7p [Saccharomyces cerevisiae VL3]
gi|392297240|gb|EIW08340.1| Nam7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 971
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 274/561 (48%), Gaps = 73/561 (13%)
Query: 110 GQGVVYRLKDSSITVAFDDI-----------PEEGLNSPLRLEKLANEVTYRRMKDALIQ 158
G+G + RL +S F D P L + E + +Y RM+DAL +
Sbjct: 313 GRGYIVRLPNS-----FQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKK 367
Query: 159 LSKGVQNGPAAGLIPV-LFGEQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSK 212
+ + +G + + G Q + L K+ + F + L+ SQ +A+S L +
Sbjct: 368 FA--IDKKSISGYLYYKILGHQVVDISFDVPLPKEFSIPNF-AQLNSSQSNAVSHVLQ-R 423
Query: 213 NVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLG 271
+ ++ GPPGTGKT T I+ K +IL CA SN+AVD++ +L +++VRL
Sbjct: 424 PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLT 483
Query: 272 HPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTL 331
+R + +ES++ N +L + + + K LLK KD E+ L
Sbjct: 484 AKSR---EDVESSVS-------NLALHNLVGRGAKGELKNLLKLKD---------EVGEL 524
Query: 332 SKEERKRQQLAV----TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACW 387
S + KR V +++ ADVV T GA ++LD T F V+IDE+ QA E C
Sbjct: 525 SASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRLD-TKFRTVLIDESTQASEPECL 583
Query: 388 IALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMH 446
I ++KG++ IL GDH QL P + +A GL ++LFERL L V L VQYRM+
Sbjct: 584 IPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL--GHVPIRLEVQYRMN 641
Query: 447 EHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT---------LLLIDIAGCDMEEKKDEED 497
++ + S Y ++ +GV T P + ++ A EE
Sbjct: 642 PYLSEFPSNMFYEGSLQ---NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGT 698
Query: 498 STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILR-----SKDDKLKNM 551
S +N EA +L + GV IG+ITPY Q +L+ ++ KD +K +
Sbjct: 699 SFLNRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIK-V 757
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
EV++VD FQGREK+ II+S VR+N ++ +GFL D RR+NV +TRA+ ++ + +++
Sbjct: 758 EVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLAR 817
Query: 612 DGFLKRLIEYFEEHAEYLSGS 632
+ L+ +F E + G+
Sbjct: 818 NTLWNHLLIHFREKGCLVEGT 838
>gi|449685514|ref|XP_002161143.2| PREDICTED: regulator of nonsense transcripts 1-like [Hydra
magnipapillata]
Length = 1153
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 150/451 (33%), Positives = 231/451 (51%), Gaps = 48/451 (10%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+HSQ A+ L + + ++ GPPGTGKT T I+ K+G +IL CA SNIAVD
Sbjct: 489 LNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSASIVYHLAKQGLGQILVCAPSNIAVDQ 547
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQV--LRGDNSSLASDIRKEMKALNGKLL 313
+ E++ +++VRL +R A+D+ V L N D E++ KL
Sbjct: 548 LTEKIHKTGLKVVRLAAKSR-------EAIDSPVGFLALHNQVRNMDSMPELQ----KLQ 596
Query: 314 KTKDKNTRREIQKELRTLSKEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLD--NT 368
+ KD Q EL S +E++ + L A +++++ADV+ TT GA +L
Sbjct: 597 QLKDD------QGELS--SSDEKRYKTLKTSAEKELLQHADVICTTCIGAGDPRLRVAKL 648
Query: 369 SFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERL 427
F V+IDE+ QA E C + ++ G++ +L GDH QL P V +A GL ++LFERL
Sbjct: 649 RFRCVLIDESTQATEPECMVPIVHGTKQLVLVGDHCQLGPVVMCKKAASAGLSQSLFERL 708
Query: 428 ADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTL-------- 479
L + L VQYRMH + + S Y+ ++ +GV ++P +
Sbjct: 709 VVLGIRPIR--LQVQYRMHPSLSEFPSNLFYDGTLQ---NGVTVAERSQPGVDFPWPVGD 763
Query: 480 -LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ---- 534
+ A EE S +N EA A R +++GV +GIITPY Q
Sbjct: 764 KPMFFYATTGQEEISSSGTSYLNRTEAATVEKIATRFLRAGVKPEQMGIITPYEGQRAYI 823
Query: 535 VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAV 593
V ++ S L +N+EV++VD FQGREK+ II+S RSN + +GFL D RR+NVA+
Sbjct: 824 VAYMQFSGSLHSSLYQNIEVASVDAFQGREKDYIIMSCARSNEHQGIGFLKDPRRLNVAL 883
Query: 594 TRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
TR++ ++ + + +S L+ ++E
Sbjct: 884 TRSKYGLIIIGNPKVLSKQPLWNHLLNDYKE 914
>gi|403412652|emb|CCL99352.1| predicted protein [Fibroporia radiculosa]
Length = 745
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 143/373 (38%), Positives = 204/373 (54%), Gaps = 50/373 (13%)
Query: 89 FGTHDVVVLKPNKADLGSPALGQG---VVYRL-KDSSITVAFD--DIPEEGLNSP--LRL 140
FG V K K D + A QG VVY++ D I + D + +GL+ P R+
Sbjct: 93 FGRKKSAVSKTKKPDDSAAARTQGLEGVVYKVVSDMRIVITLDVSETSTDGLDLPERCRV 152
Query: 141 EKLANEVTYRRMKDALIQLSKGV----QNGPAAGLIP-------VLFGEQKPT---VLKK 186
KLAN VT+ RM AL L K V Q +P VL G +P+ L+K
Sbjct: 153 VKLANSVTFDRMDKALNILEKIVLPDSQPSSEDKFLPDLTQLTRVLMGMSEPSKRNFLQK 212
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS----- 241
I F F+ L+ SQ+DA+ A+ S + +HGPPGTGKT T++EII Q S
Sbjct: 213 -IVF--FDETLNSSQQDAVRFAMESPEIACIHGPPGTGKTHTLIEIIRQMTSVTSSNPKP 269
Query: 242 -KILACAASNIAVDNIVERLVP-------HRVRLVRLGHPARLLPQ--VLESALDAQVLR 291
++L C ASN+AVDNI+ERL+ ++++ R+GHPAR++ +++S L+ + R
Sbjct: 270 LRLLICGASNLAVDNILERLLGLPSPSNGEKIKVTRVGHPARVMAHEGIIDSTLEVKASR 329
Query: 292 GDNSSLASDIRKEMKA----LNGKLLKTKDKNTR----REIQKELRTLSKEERKRQQLAV 343
D ++LA D++ E+ A L+GK K K R +++ +E+R L KE+R + V
Sbjct: 330 SDQAALAKDVKNELTAALDTLSGKAKGVKGKAPRGAERKKLWEEVRALRKEQR--EGGVV 387
Query: 344 TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHL 403
V+ + VVL T A R+L N FD++IIDEA QALE CWI + KG + ILAGD +
Sbjct: 388 ETVLAESQVVLATCHSAGGRQLRNHKFDVIIIDEATQALEAVCWIPIFKGQKLILAGDPM 447
Query: 404 QLPPTVQSVEAEK 416
QLPPT+ S K
Sbjct: 448 QLPPTILSANDHK 460
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 113/195 (57%), Gaps = 20/195 (10%)
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH----------- 465
+ L TLF+RL +YG ++ ML +QYRMH I + SK +Y+SK+ +H
Sbjct: 552 RTLETTLFDRLEKMYGPDIKRMLNIQYRMHAKIAEFPSKVMYHSKLVSHSSVASHLLRDL 611
Query: 466 PSGVKRTSSTEPTLL-----LIDIAGCDMEEKKD---EEDSTMNEGEAEVAMAHAKRLIQ 517
P+ E LL D AGC+ E+ D +E S NE E+ V + +LI
Sbjct: 612 PNAGAGNEDDEQELLGTPVVFFDTAGCEYFERTDSEGDEGSKCNENESAVVKNYVDQLIG 671
Query: 518 SGVHASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSK 577
+G+ S I IITPY AQV LL L L ++E+ TVDG QGREK+A+II++VRSN K
Sbjct: 672 TGITPSQIAIITPYQAQVSLLTSLLRPIHGL-DLEIGTVDGMQGREKDAVIITLVRSNEK 730
Query: 578 KEVGFLSDRRRMNVA 592
+EVGFL D+RR+N A
Sbjct: 731 REVGFLKDKRRLNGA 745
>gi|170053152|ref|XP_001862543.1| nonsense-mediated mRNA decay protein 1 [Culex quinquefasciatus]
gi|167873798|gb|EDS37181.1| nonsense-mediated mRNA decay protein 1 [Culex quinquefasciatus]
Length = 1136
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 146/456 (32%), Positives = 229/456 (50%), Gaps = 43/456 (9%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVD 254
+L+ SQ A+ AL + + ++ GPPGTGKT T I+ Q V+ G IL CA SN AVD
Sbjct: 474 DLNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIVYQLVRLNGGPILVCAPSNTAVD 532
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
+ E++ +++VR+ +R A+D+ V +L + IR + +
Sbjct: 533 QLTEKIHRTNLKVVRVCAKSR-------EAIDSPV---SFLALHNQIRN--------MEQ 574
Query: 315 TKDKNTRREIQKELRTLSKEERKRQQL----AVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
D ++++ E LS + KR ++ A ++++ ADV+ T GA +L F
Sbjct: 575 NSDLKKLQQLKDETGELSSSDEKRYRMLKKQAERELLEAADVICCTCVGAGDPRLQRIKF 634
Query: 371 DLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
++IDE+ Q+ E C + ++ G++ IL GDH QL P V +A K GL ++LFERL
Sbjct: 635 SSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVV 694
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR--------TSSTEPTLLL 481
L L VQYRMH + + S Y ++ +R S P L
Sbjct: 695 L--GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEERKLKVDFPWPSPDTPMFFL 752
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVL 537
+ EE S +N EA R +++GV IGIITPY Q V
Sbjct: 753 VTQG---QEEIAGSGTSYLNRTEASNVEKITTRFLKAGVKPEQIGIITPYEGQRAYLVQY 809
Query: 538 LKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
++ S KL + +E+++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRA
Sbjct: 810 MQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRA 869
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
+ +V + + +S L+ ++++ + GS
Sbjct: 870 KYGIIIVGNPKVLSKQQLWNHLLNFYKDKKVLVEGS 905
>gi|193614406|ref|XP_001947281.1| PREDICTED: regulator of nonsense transcripts 1-like [Acyrthosiphon
pisum]
Length = 1118
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 148/448 (33%), Positives = 222/448 (49%), Gaps = 44/448 (9%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVD 254
+L+ SQ A+ A+ + + ++ GPPGTGKT T I+ Q V G +L CA SNIAVD
Sbjct: 462 DLNRSQVKAVKHAVQ-RPLSLIQGPPGTGKTVTSATIVYQLVTINGGPVLVCAPSNIAVD 520
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
+ E++ +++VRL +R + ++S + L L S NG L K
Sbjct: 521 QLTEKIHRTGLKVVRLCSKSR---ESIDSPVSFLALHNQVQKLPS---------NGVLQK 568
Query: 315 TKDKNTRREIQKELRTLSKEERKR----QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
+ +++ E LS ++ KR +++A ++++ ADV+ TT GA +L F
Sbjct: 569 LQ------QLKNETGELSMDDEKRYSVLKKVAEQELLEAADVICTTCVGAGDPRLMQFKF 622
Query: 371 DLVIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
++IDE+ QA E C + ++ G + IL GDH QL P V +A GL ++LFERL
Sbjct: 623 HSILIDESVQATEPECMVPVVHGVQQLILVGDHCQLGPVVTCKKAANAGLTQSLFERLVV 682
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR---------TSSTEPTLL 480
L L VQYRMH + +SS Y ++ R + EP L
Sbjct: 683 LGIRPFR--LEVQYRMHPELSRFSSNFFYEGSLQNGVCADDRKLRKIEFPWPVADEPMLF 740
Query: 481 LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKI 540
A EE S +N EA A R ++ GV IGIITPY Q L
Sbjct: 741 Y---ATLGHEEIAGSGTSYLNRTEAANVEHIATRFLRCGVRPDQIGIITPYEGQRAYLVQ 797
Query: 541 LRSKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
L + +E+++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TR
Sbjct: 798 YMQYQAPLPAKLYQKIEIASVDAFQGREKDFIIMSCVRSNENQGIGFLNDPRRLNVALTR 857
Query: 596 ARRQCCLVCDTETVSSDGFLKRLIEYFE 623
A+ +V + + +S L+ Y++
Sbjct: 858 AKYGLLIVGNPKVLSKKQLWNHLLNYYK 885
>gi|401885778|gb|EJT49866.1| ATP dependent helicase [Trichosporon asahii var. asahii CBS 2479]
Length = 1013
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 161/497 (32%), Positives = 248/497 (49%), Gaps = 60/497 (12%)
Query: 148 TYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK---PFNSNLDHSQKDA 204
++ RM+ A+ + + +G I +L E P VL+ + + P L+HSQ A
Sbjct: 363 SFDRMQQAMKTFA--IDEKSVSGYI-LLGHEVDPQVLRTQMPKRFTAPGLPELNHSQMAA 419
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDNIVERLVPH 263
+ KA+ K + ++ GPPGTGKT T I+ K ++L CA SN+AVD++ E++
Sbjct: 420 V-KAVLQKPLSLIQGPPGTGKTVTSASIVYHLSKMNPGQVLVCAPSNVAVDHLAEKIHMT 478
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
+++VRL +R A+D+ V L+ ++ K +TRRE
Sbjct: 479 GLKVVRLTAKSR-------EAVDSPV--------------SYLTLHEQVAKN---DTRRE 514
Query: 324 IQK------ELRTLSK-EERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDLV 373
+QK EL LS+ +ERK + L D++ ADV+ TT GA +L F V
Sbjct: 515 LQKLIQLRNELGELSQSDERKYKSLVRACEKDILNAADVICTTCVGAGDPRLAKFKFRTV 574
Query: 374 IIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG 432
++DEA QA E I L+ G + +L GDH QL P + + +A + GL ++LFERL L
Sbjct: 575 LVDEATQAAEPEAMIPLVMGCKQAVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVILGN 634
Query: 433 DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR--------TSSTEPTLLLIDI 484
+ L VQYRMH + + S Y ++ + +R + ++
Sbjct: 635 RPIR--LQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVADTPMMFHQN 692
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ---VVLLKIL 541
G EE S +N EA + +SGV S IG+ITPY Q +V L
Sbjct: 693 TGT--EEISSSGTSFVNRTEAANVEKMVTKFFKSGVLPSQIGVITPYEGQRSFIVSYMQL 750
Query: 542 RS--KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 599
K D K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRA+
Sbjct: 751 HGALKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYG 810
Query: 600 CCLVCDTETVSSDGFLK 616
++ + + +S ++
Sbjct: 811 VVILGNPKVLSKPSMMQ 827
>gi|189234959|ref|XP_973320.2| PREDICTED: similar to nonsense-mediated mrna decay protein 1
(rent1) [Tribolium castaneum]
Length = 1090
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 149/454 (32%), Positives = 236/454 (51%), Gaps = 40/454 (8%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSKILACAASNIAVD 254
+L+ SQ A+ AL + + ++ GPPGTGKT T I+ Q VK+ G +L CA SN AVD
Sbjct: 441 DLNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVD 499
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
+ E++ +++VRL +R A+D+ V +L + IRK M+A N +L K
Sbjct: 500 QLTEKIHKTNLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRK-MEA-NTELQK 547
Query: 315 TKDKNTRREIQKELRTLSKEERKR----QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
+ +++ E LS + KR ++LA ++++ ADV+ T GA +L F
Sbjct: 548 LQ------QLKDETGELSSVDEKRYRMLKKLAEKELLEAADVICCTCVGAGDPRLVRLKF 601
Query: 371 DLVIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
++IDE+ QA E C + ++ G + IL GDH QL P V +A + GL ++LFERL
Sbjct: 602 HSILIDESMQATEPECMVPVVLGVKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV 661
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK----AHPSGVKRTSSTEPTL---LLI 482
L L VQYRMH + + S Y ++ A + + P + +
Sbjct: 662 LGIRPFR--LEVQYRMHPELSRFPSNFFYEGSLQNGVCADERKLNKIDFPWPVIDRPMFF 719
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKIL 541
+ EE S +N EA A R ++SGV IG+ITPY Q L++ +
Sbjct: 720 HVTQ-GQEEIAGSGTSYLNRTEAANVEKIATRFLRSGVKPEQIGVITPYEGQRAYLVQYM 778
Query: 542 RSK----DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
+ + + +E+++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRA+
Sbjct: 779 QYQGSLHSKTYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAK 838
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ +++E + G
Sbjct: 839 YGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEG 872
>gi|270001378|gb|EEZ97825.1| hypothetical protein TcasGA2_TC000192 [Tribolium castaneum]
Length = 1095
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 149/454 (32%), Positives = 236/454 (51%), Gaps = 40/454 (8%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSKILACAASNIAVD 254
+L+ SQ A+ AL + + ++ GPPGTGKT T I+ Q VK+ G +L CA SN AVD
Sbjct: 446 DLNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVD 504
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
+ E++ +++VRL +R A+D+ V +L + IRK M+A N +L K
Sbjct: 505 QLTEKIHKTNLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRK-MEA-NTELQK 552
Query: 315 TKDKNTRREIQKELRTLSKEERKR----QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
+ +++ E LS + KR ++LA ++++ ADV+ T GA +L F
Sbjct: 553 LQ------QLKDETGELSSVDEKRYRMLKKLAEKELLEAADVICCTCVGAGDPRLVRLKF 606
Query: 371 DLVIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
++IDE+ QA E C + ++ G + IL GDH QL P V +A + GL ++LFERL
Sbjct: 607 HSILIDESMQATEPECMVPVVLGVKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV 666
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK----AHPSGVKRTSSTEPTL---LLI 482
L L VQYRMH + + S Y ++ A + + P + +
Sbjct: 667 LGIRPFR--LEVQYRMHPELSRFPSNFFYEGSLQNGVCADERKLNKIDFPWPVIDRPMFF 724
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKIL 541
+ EE S +N EA A R ++SGV IG+ITPY Q L++ +
Sbjct: 725 HVTQ-GQEEIAGSGTSYLNRTEAANVEKIATRFLRSGVKPEQIGVITPYEGQRAYLVQYM 783
Query: 542 RSK----DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
+ + + +E+++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRA+
Sbjct: 784 QYQGSLHSKTYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAK 843
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ +++E + G
Sbjct: 844 YGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEG 877
>gi|149241697|ref|XP_001526342.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450465|gb|EDK44721.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 2053
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 167/507 (32%), Positives = 248/507 (48%), Gaps = 81/507 (15%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII-------------------LQE 236
+++ SQ AI S F++ GPPGTGKT T++ I+ +
Sbjct: 1349 DVNKSQARAIKGTYESDGFFLIQGPPGTGKTKTILGIVGYALSHKESDKIIELPQKPAAK 1408
Query: 237 VKRGSKILACAASNIAVDNIVERLV--------PHR-VRLVRLGHPARLLPQVLESALDA 287
+G KIL CA SN AVD +V RL H +++VRLG + V + L+
Sbjct: 1409 PSKGGKILICAPSNAAVDELVLRLRNGVKNSKGEHMDLKVVRLGRSDAINAAVRDLTLEE 1468
Query: 288 QVLRGDNSSLASD--IRKEMKALNGKLLKTKDK-NTR------------------REIQK 326
V + S D I ++A + K +K +D+ TR RE+ K
Sbjct: 1469 LVDKELQSKQQEDVIIDPGIRAEHTKKVKERDQIKTRLSTESLSSKEIDKLETRLREVNK 1528
Query: 327 ELRTLSK---EERKRQQLAV-----------TDVIKNADVVLTTLTGAVSRKLDNTS--F 370
E L+K E+R+R +A T ++ +A V+ TL+G+ + + S F
Sbjct: 1529 ERSDLAKKLDEQRERASIAYRSREIGRRTIQTKILDDAQVLCATLSGSAHELISSLSVKF 1588
Query: 371 DLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
D VIIDEA Q LE++ I L G R CI+ GD QLPPTV S A ++LF R+
Sbjct: 1589 DQVIIDEACQCLELSAIIPLRYGCRKCIMVGDPNQLPPTVLSQAASSFNYEQSLFVRMQT 1648
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS----STEP--TLLLID 483
Y D V +L VQYRMH I + S + Y SK+K P+ ++ S +P D
Sbjct: 1649 NYPDSVY-LLNVQYRMHPQISQFPSAEFYQSKLKDGPNMEEKNKRPWHSIKPLSPYRFFD 1707
Query: 484 IAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQ---SGVHASDIGIITPYAAQVVLLKI 540
IA K + S N EA + + ++LI A +GII+PY Q+ +K
Sbjct: 1708 IAS--RHTKNELTRSLFNLEEARICLQLVQKLITLIPQQAFAGKVGIISPYKEQIRTIKD 1765
Query: 541 LRSKDDK---LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
+ ++ L ++ +TVDGFQG+EKE II+S VR+++ VGFLSD RRMNVA+TRAR
Sbjct: 1766 VFVREYGKIILNEIDFNTVDGFQGQEKEIIIMSCVRASADGNVGFLSDVRRMNVALTRAR 1825
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEE 624
++ + E++ + RL++ E+
Sbjct: 1826 TTLWILGNRESLLRNKVWNRLLKDAEQ 1852
>gi|333038075|gb|AEF13567.1| hypothetical protein PICST_73544 [Scheffersomyces stipitis CBS
6054]
Length = 1021
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 193/650 (29%), Positives = 299/650 (46%), Gaps = 91/650 (14%)
Query: 22 MAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTK- 80
APL+ LE + +++ S+ L+ Q K + LN + L TL ++S
Sbjct: 268 FAPLVKLEADYDMNLK----ESQALEHIQVKWALGLNNR------HLTSFTLSTYESNDL 317
Query: 81 ----GDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS---SITVAFD---DIP 130
GD + G HD G+G + RL ++ T+ + P
Sbjct: 318 KVAVGDEIILRYTGAHD------------EKWEGRGFIVRLPNAHQEEFTLELNAAKTAP 365
Query: 131 EEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI----------PVLFGEQK 180
L++ E + +Y RM+DA+ + V +G I PV F +
Sbjct: 366 PTHLSTDFTAEFVWKGTSYERMQDAMKLFA--VDEESVSGYIYHKLLGHEVEPVEFDVKL 423
Query: 181 PTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-R 239
P P + L+ SQ +A+ L + + ++ GPPGTGKT T II K
Sbjct: 424 PQRFSH-----PNLTELNVSQINAVRSVLQ-RPLSLIQGPPGTGKTVTSATIIYHLTKLN 477
Query: 240 GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLAS 299
KIL CA SN+AVD++ E+L ++++RL +R + +ES++ + SL +
Sbjct: 478 KEKILVCAPSNVAVDHLAEKLDSLGLKVLRLTARSR---EDVESSVS-------HLSLHN 527
Query: 300 DIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQ----QLAVTDVIKNADVVLT 355
+ + K KLL+ ++ EL LS + K + + + ++ DVV
Sbjct: 528 LVNRTAKGELKKLLR---------LRNELGELSLSDSKSLIRLIRTSESKILAQCDVVCC 578
Query: 356 TLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEA 414
T GA R+L N F V+IDE+ QA E I ++KG++ IL GDH QL P + +A
Sbjct: 579 TCVGAADRRLSNIKFRTVLIDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILDKKA 638
Query: 415 EKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR--T 472
GL ++LFERL L V L VQYRM+ + + S Y ++ + +R
Sbjct: 639 GDAGLRQSLFERLVIL--GHVPIRLEVQYRMNPCLSEFPSNIFYEGSLQNGVTSAQRRIE 696
Query: 473 SSTEPTLL----LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
SST P + ++ A EE +S +N EA RL + GV A IG+I
Sbjct: 697 SSTFPWPVYDSPMMFWANYGREEISGSGNSYLNRVEAMNVEKIITRLFKDGVKAEQIGVI 756
Query: 529 TPYAAQVVLLKILRSKDDKLKNM-------EVSTVDGFQGREKEAIIISMVRSNSKKEVG 581
TPY Q L S + L EV++VD FQGREK+ II+S VR+NS ++G
Sbjct: 757 TPYEGQRAYLVSYMSINSTLAEFKEQYLEVEVTSVDAFQGREKDYIILSCVRANSSHQIG 816
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
FLSD RR+NVA+TRA+ ++ + + + +L+ +F E + G
Sbjct: 817 FLSDPRRLNVALTRAKYGLVVLGNPRALCRNRLWNQLLIHFREKGCLVDG 866
>gi|303389379|ref|XP_003072922.1| putative DNA helicase [Encephalitozoon intestinalis ATCC 50506]
gi|303302065|gb|ADM11562.1| putative DNA helicase [Encephalitozoon intestinalis ATCC 50506]
Length = 563
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 139/444 (31%), Positives = 228/444 (51%), Gaps = 78/444 (17%)
Query: 193 FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIA 252
++S+L+ SQ+ A+ + L N + + GPPGTGKT TVVEII Q + ++L C SN++
Sbjct: 172 YDSSLNESQRKAV-EMLKYNNPYKILGPPGTGKTRTVVEIISQLLVNNKRVLVCGPSNVS 230
Query: 253 VDNIVERLVPHRV------RLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
VDNI+ER + + RLG + + LD+Q
Sbjct: 231 VDNIIERFLKSKYFACNQPSFYRLGSSEKGFSHL---NLDSQA----------------- 270
Query: 307 ALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLD 366
L+ K +K K++N + K++R++Q+ + + N+ VV TL ++ K
Sbjct: 271 ELHTKFMK-KERNDK--------NFYKDKREKQKKFIEEKQANSSVVFATLFSSLKEK-- 319
Query: 367 NTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFER 426
T FD V+IDEA QA E ++A+ KGS IL GD +QL P S L+E
Sbjct: 320 -TKFDWVLIDEACQACEAESFLAVSKGSTFILVGDPMQLCPETSS-----------LYES 367
Query: 427 LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKA----HPSGVKRTSSTEPTLLLI 482
L + T +L QYRM ++ +S++ YN ++K+ H S ++ +L +
Sbjct: 368 L-----NLPTMLLNEQYRMPSGLLKFSNEVFYNGRVKSITEEHTSVFGKS-----LILFV 417
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILR 542
D ++ E + S N GEAE+ + I + ++GII PY +QV+LL+
Sbjct: 418 DTQYFELYE--SDGVSKSNIGEAEIVKS-----IVETLQGEEVGIIAPYTSQVLLLR--- 467
Query: 543 SKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCL 602
+ ++EVSTVDGFQG+E++ III++VR N + E GFL + +R+NVA+TR ++ +
Sbjct: 468 ----DMVDVEVSTVDGFQGQERDYIIITLVRCNDRDEFGFLDNEKRLNVALTRCKKGLVV 523
Query: 603 VCDTETVSSDGFLKRLIEYFEEHA 626
+ D+ T + L ++ ++
Sbjct: 524 IGDSRTFRRSSTFQMLFKFLRNNS 547
>gi|302306557|ref|NP_982968.4| ABR022Cp [Ashbya gossypii ATCC 10895]
gi|299788573|gb|AAS50792.4| ABR022Cp [Ashbya gossypii ATCC 10895]
gi|374106171|gb|AEY95081.1| FABR022Cp [Ashbya gossypii FDAG1]
Length = 999
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 168/553 (30%), Positives = 277/553 (50%), Gaps = 57/553 (10%)
Query: 110 GQGVVYRLKDSSITVAFDD-----------IPEEGLNSPLRLEKLANEVTYRRMKDALIQ 158
G+G + RL +S F D P L + E + +Y+RM++AL +
Sbjct: 321 GRGYILRLPNS-----FQDEFTLELKPSKAPPPTNLTTGFTAEFVWKGTSYQRMQEALKK 375
Query: 159 LSKGVQNGPAAGLIPV-LFGEQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSK 212
+ V +G + + G P + L KD + F + L+ SQ +A++ L +
Sbjct: 376 FA--VDKKSISGYLYYKILGHDVPDIEFEVDLPKDFSIPNF-TKLNTSQVNAVAHVLQ-R 431
Query: 213 NVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLG 271
+ ++ GPPGTGKT T I+ K ++L CA SN+AVD++ +L +++VRL
Sbjct: 432 PLSLIQGPPGTGKTVTSATIVYHLSKMHKERVLVCAPSNVAVDHLAAKLRDMGLKVVRLT 491
Query: 272 HPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTL 331
+R + +ES++ L ++ +A R E+K L + + + K+ R+
Sbjct: 492 AKSR---EDVESSVSDLAL---HNLVARSSRGELKKLLKLKDEVGELSV-----KDTRSF 540
Query: 332 SKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL 391
K RK + + ++K ADVV T GA ++LD + F V+IDE+ QA E C I ++
Sbjct: 541 VKLVRKTE----STILKKADVVCCTCVGAGDKRLD-SKFRTVLIDESTQASEPECLIPII 595
Query: 392 KGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIM 450
KG++ +L GDH QL P + A GL ++LFERL L V L VQYRM+ ++
Sbjct: 596 KGAKQVVLVGDHQQLGPVILDRNAGDAGLKQSLFERLISL--GHVPIRLEVQYRMNPYLS 653
Query: 451 NWSSKQLYNSKIKAHPSGVKRT--SSTEPTLL----LIDIAGCDMEEKKDEEDSTMNEGE 504
+ S Y ++ + +RT S+ P + ++ A EE S +N E
Sbjct: 654 EFPSNMFYEGTLQNGVTVEQRTVVDSSFPWPICDIPMMFWANYGREEISANGTSYLNRIE 713
Query: 505 AEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKILRSKD-DKLKNMEVSTVDGF 559
A RL + GV IG++TPY Q + +++ S D D +EV++VD F
Sbjct: 714 AINCERIITRLFKDGVKPEQIGVVTPYEGQRAYIIQYMQMNGSMDKDLYMTVEVASVDAF 773
Query: 560 QGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLI 619
QGREK+ II+S VR+N ++ +GFL+D RR+NVA+TRA+ ++ + ++ + L+
Sbjct: 774 QGREKDYIILSCVRANDQQSIGFLTDPRRLNVALTRAKYGLAILGNPASLCRNSIWNHLL 833
Query: 620 EYFEEHAEYLSGS 632
+F E + G+
Sbjct: 834 IHFREKGCLVEGT 846
>gi|328866870|gb|EGG15253.1| hypothetical protein DFA_10087 [Dictyostelium fasciculatum]
Length = 854
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 169/535 (31%), Positives = 266/535 (49%), Gaps = 86/535 (16%)
Query: 137 PLRLEKLANEVTYRRMKDALIQLS--KGVQNGPAAGLIPVLFGEQKPTVLKKDIA---FK 191
P R++ N +T RM AL +S K + A +I FG KP +D +
Sbjct: 215 PWRIDLGTNLITMERMMKALTMVSSDKALYQTKLADII---FGHLKPGKTLEDTCATEYI 271
Query: 192 PFNS------------------NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII 233
PF + NL+ SQKDAI K++ + ++ GPPGTGK+TT + ++
Sbjct: 272 PFQTKESPLKFKDMFPMDYKTWNLNPSQKDAIEKSIC-RRASLIQGPPGTGKSTTAIYLL 330
Query: 234 L------QEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQV----LES 283
Q K KILA + +N VDN++E L+ V ++RLG ++ ++ LE
Sbjct: 331 RLLVHRKQSGKSNVKILATSFTNTGVDNLLEGLLKAGVNVLRLGDANKVREELRCATLEY 390
Query: 284 ALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAV 343
++ ++ R D+S+ S+ +K ++ +Q E +E + R
Sbjct: 391 RMEEELNRWDSSAKRSN------------QGSKPGSSSYYMQSE-----REIKSR----- 428
Query: 344 TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGS-RCILAGDH 402
+I ADV+ +T G+ L + F ++++DEA QA E A I LLK S + L GD
Sbjct: 429 --LISEADVICSTCIGSGHEMLMDEKFQIIVVDEATQATEPAILIPLLKSSEQMYLFGDQ 486
Query: 403 LQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS-MLTVQYRMHEHIMNWSSKQLYN-- 459
QL P + S +A + GL ++F+RL + +T +L QYRMH I ++ YN
Sbjct: 487 NQLAPIILSHKAIEGGLNISMFDRL---FKSGLTPFLLNTQYRMHSSISDFPRHHFYNGL 543
Query: 460 -------SKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHA 512
S +K P G+K P ++ IDI+ E K S N EA + A
Sbjct: 544 LNNGTNDSNLKI-PIGIKWPQIDFP-VVFIDISNGREEIK---HHSLYNNEEAVAVVQVA 598
Query: 513 KRLIQS--GVHASDIGIITPYAAQVVLLKILRSKDDKLKNME--VSTVDGFQGREKEAII 568
+ L+++ + ++IGIITPY AQV + + S D + + V+TVD +QGRE + II
Sbjct: 599 ESLLENDESLFRNNIGIITPYHAQVKHINQVFSNDKSWRGAQPSVATVDSYQGREMDVII 658
Query: 569 ISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV--SSDGFLKRLIEY 621
S VRSN+K +GFL D RR+NV++TRA+R ++ + T+ SSD K +++
Sbjct: 659 FSTVRSNTKGNIGFLKDWRRLNVSITRAKRGLVVIGNFGTINNSSDEHWKAYVQW 713
>gi|395755903|ref|XP_002833699.2| PREDICTED: DNA-binding protein SMUBP-2-like, partial [Pongo abelii]
Length = 269
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/235 (48%), Positives = 155/235 (65%), Gaps = 10/235 (4%)
Query: 50 QKKGSTILNLKCVDAQTGLMGKTLLEFQSTK---GDVLPAHKFGTHDVVVLKPNKADLGS 106
Q +G +L L+ +TGL G+ L+ F+ + LP++ F + D+V L + A+ GS
Sbjct: 27 QSRGVCLLKLQVSSQRTGLYGRLLVTFEPRRCGSAAALPSNSFTSGDIVGLY-DAANEGS 85
Query: 107 PALGQGVVYRLKDSSITVAFDDIPEEGLN----SPLRLEKLANEVTYRRMKDALIQLSKG 162
L G++ R+ S+TVAFD+ + L+ + RL KLAN+VTYRR+K ALI L K
Sbjct: 86 -QLATGILTRVTPKSVTVAFDESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKK- 143
Query: 163 VQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPG 222
+GPA+ LI VLFG P+ + FN+ LD SQK+A+S ALS K + ++HGPPG
Sbjct: 144 YHSGPASSLIEVLFGRSAPSPASEIHPLTFFNTCLDTSQKEAVSFALSQKELAIIHGPPG 203
Query: 223 TGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLL 277
TGKTTTVVEIILQ VK+G K+L CA SNIAVDN+VERL + R++RLGHPARLL
Sbjct: 204 TGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLL 258
>gi|395333828|gb|EJF66205.1| ATP dependent helicase [Dichomitus squalens LYAD-421 SS1]
Length = 1060
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 150/466 (32%), Positives = 237/466 (50%), Gaps = 40/466 (8%)
Query: 178 EQKPTVLKKDIAFK---PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIIL 234
E +P VL+ + + P L+HSQ A+ K++ K + ++ GPPGTGKT T I+
Sbjct: 406 ELEPQVLRTQMPKRFSAPGLPELNHSQMYAV-KSVLQKPLSLIQGPPGTGKTVTSASIVY 464
Query: 235 QEVKRG-SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGD 293
K ++L CA SN+AVD + E++ +++VRL +R + L+S++ L
Sbjct: 465 HLAKMNPGQVLVCAPSNVAVDQLTEKIHATGLKVVRLSAKSR---EALDSSVSFLTLHQQ 521
Query: 294 NSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQL---AVTDVIKNA 350
++ + + + KL++ K++ Q EL S +ERK + L +++ A
Sbjct: 522 VANNTTHVELQ------KLIQLKNE------QGELS--SNDERKYKALIRQCEKEILGAA 567
Query: 351 DVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTV 409
DV+ T GA +L F V+IDEA QA E C I L+ G + +L GDH QL P +
Sbjct: 568 DVICCTCVGAGDPRLSKLKFRTVLIDEATQAAEPECMIPLVLGCKQVVLVGDHQQLGPVI 627
Query: 410 QSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGV 469
+ +A + GL ++LFERL L + L VQYRMH + + S Y ++ +
Sbjct: 628 MNKKAARAGLTQSLFERLVVLGNRPI--RLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAP 685
Query: 470 KRTSSTE------PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHAS 523
+R P + EE S +N + V + +SGV S
Sbjct: 686 ERLRKNVDFPWPVPDTPMFFYQNLGQEEISSSGTSFLNRRASNVEKI-VTKFFKSGVVPS 744
Query: 524 DIGIITPYAAQ----VVLLKILRS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK 578
IG+ITPY Q V ++ S K D K +EV++VD FQGREK+ II+S VRSN +
Sbjct: 745 QIGVITPYEGQRSYIVNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQ 804
Query: 579 EVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+GFL+D RR+NVA+TRA+ ++ + + +S L+ +++E
Sbjct: 805 GIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWHYLLTHYKE 850
>gi|321463387|gb|EFX74403.1| hypothetical protein DAPPUDRAFT_57163 [Daphnia pulex]
Length = 1129
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 146/449 (32%), Positives = 226/449 (50%), Gaps = 44/449 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVDN 255
L+ SQ A+ +A+ + + ++ GPPGTGKT T I+ K GS +L CA SNIAVD
Sbjct: 451 LNRSQVFAVKQAVQ-RPLTLIQGPPGTGKTVTSATIVYHLAKLGSGPVLVCAPSNIAVDQ 509
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R A+D+ V S LA + +++ L G
Sbjct: 510 LTEKIHRTGLKVVRLCAKSR-------EAIDSPV-----SFLA--LHNQVRCLEG----A 551
Query: 316 KDKNTRREIQKELRTLSKEERKRQQL----AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+ ++++E+ LS+ + KR ++ A ++++ ADV+ T GA +L F
Sbjct: 552 SELRKLVQLKEEVGELSQGDEKRYRMLKRQAERELLEAADVLACTCVGAGDVRLARIKFA 611
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
++IDE+ QA E C + ++ G+R IL GDH QL P V A K GL ++LFERL L
Sbjct: 612 SILIDESMQATEPECMVPVVLGARQLILVGDHCQLGPVVMCKPAAKAGLSQSLFERLVVL 671
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR---------TSSTEPTLLL 481
L VQYRMH + + S Y ++ R P
Sbjct: 672 GIRPFR--LEVQYRMHPRLSEFPSNFFYEGSLQNGVCAEDRILRGVDFPWPMPDRPMFFY 729
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL 541
+ + EE S +N EA A R ++SGV IGIITPY Q L
Sbjct: 730 VTLG---QEEIAGSGTSYLNRTEASNVEKIATRFLRSGVKPEQIGIITPYEGQRAYLVQY 786
Query: 542 RSKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
L +++E+++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRA
Sbjct: 787 MQHQGSLHAKLYQDIEIASVDAFQGREKDLIIMSCVRSNENQGIGFLNDPRRLNVAMTRA 846
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEEH 625
R +V + + ++ L+ +++E+
Sbjct: 847 RYGIIIVGNPKVLAKQPVWNHLLHFYKEN 875
>gi|340053654|emb|CCC47947.1| putative nonsense mRNA reducing factor 1 [Trypanosoma vivax Y486]
Length = 861
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 152/424 (35%), Positives = 217/424 (51%), Gaps = 40/424 (9%)
Query: 195 SNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSKILACAASNIAV 253
SNL++SQ+ A+ AL K + ++ GPPGTGKT+T V I+ Q +R ++IL CA SN+AV
Sbjct: 393 SNLNNSQEQAVRTALK-KPLTLIQGPPGTGKTSTSVAIVSQLYERVKTQILVCAPSNVAV 451
Query: 254 DNIVERLVPHRVRLVRLGHPAR--LLPQVLESALDAQVLRGDNSSLASDIRKEMKAL--N 309
D++ ERL + +VRL R + V LD QV +S + K + L +
Sbjct: 452 DHLAERLEAAGLNVVRLQPRCRDVISVAVERLGLDNQVEDFIETSTGHETLKRILGLIRS 511
Query: 310 GKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTS 369
G+ + +D N ++ ++ L ++ ADVV T GA +L
Sbjct: 512 GENISDEDYNAYKKGTMKIEEL--------------ILNKADVVCCTCIGAGDSRLREMR 557
Query: 370 FDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
F V+IDEA Q E I L++G++ L GDH QL P V S+ AE+ G R+LFERL
Sbjct: 558 FKYVLIDEATQGTEPETLIPLVRGAKQVFLVGDHCQLRPVVFSIAAERTGFRRSLFERL- 616
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS--------STEPTLL 480
L L VQYRMH + + S Y ++ + +R + T P
Sbjct: 617 -LMMGHRPLRLDVQYRMHPCLSLFISHHFYEGTLQNGVTEGQRDALQVFPWPDGTRP-FF 674
Query: 481 LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQ-SGVHASDIGIITPYAAQVVLLK 539
+ G EE S +N EA +A +LI+ GV IG+ITPY +Q L+
Sbjct: 675 FYNSTG--PEELGANGSSYLNRTEAALAEQVVTKLIRDGGVSPDGIGVITPYRSQCRFLR 732
Query: 540 ILRSKDDKLK-----NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
S+ L +EVS+VD FQGREKE II S VRSN ++ +GF D RR+NV++T
Sbjct: 733 NYLSRCGFLPASTYDRVEVSSVDAFQGREKEFIIFSCVRSNHRQGIGFAVDGRRLNVSLT 792
Query: 595 RARR 598
RA+R
Sbjct: 793 RAKR 796
>gi|405119638|gb|AFR94410.1| DNA helicase [Cryptococcus neoformans var. grubii H99]
Length = 903
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 143/439 (32%), Positives = 231/439 (52%), Gaps = 55/439 (12%)
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIIL---QEVKRGSKILACAASNIAVDNIVERLV 261
+S+ALS ++ GPPGTGKT +VE I + IL CA +N+AVDN++ ++
Sbjct: 471 LSEALS-----LVQGPPGTGKTRVIVETIKLLKHHFQIPHPILVCAHTNVAVDNLLAGMI 525
Query: 262 PHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTR 321
H V+ +R G R+ + + +L+ ++ + + ++ K L ++ + N
Sbjct: 526 KHGVKAIRTGMAERVPADLKQYSLEIKMESHPMWTSVQTMVEKAKRLKDEIFRMDFGNPE 585
Query: 322 REIQ-KELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQ 380
R+ + E++ + ++ +Q +++ +ADVV TT A+S L++ F +V +DEA+
Sbjct: 586 RQQKISEMKKIWRQIWGIRQSITRELLLDADVVCTTCISAISANLNSIDFPIVFLDEASM 645
Query: 381 ALEIACWIALLKGSRCI-LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS-M 438
A E + L+KGS + + GDH QLPP + S +A GL +LFERL ++ +V S M
Sbjct: 646 ATEPLTLLPLMKGSSHVAIIGDHKQLPPVIVSQDAHAGGLSTSLFERL--IHEKDVPSIM 703
Query: 439 LTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEP-TLLLI------DIAGCDMEE 491
L QYRMH + +SSK Y+S +K +G + P T LI D + ++
Sbjct: 704 LDTQYRMHPSLAAFSSKTFYSSLLK---NGTPASERPPPETAFLIPEDPIPDPSTGELRL 760
Query: 492 KKDEEDSTM---------------NEGEAEVAMAHAKRLIQSG--VHASDIGIITPYAAQ 534
++ + T NEGEAE+ + L+ + S IGII PY Q
Sbjct: 761 SGEKTNLTFLNHSHLESPVLQSMANEGEAEIIVDVVTDLLHKNPDLKGSQIGIIAPYLGQ 820
Query: 535 VVL----LKILRSKD-----------DKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKE 579
+ + L R++D ++++++E+ TVDGF+GREKE II S VRSN+
Sbjct: 821 IKVVSETLFASRTQDSLKTILGDERTEEVQDVEIKTVDGFEGREKEVIIFSTVRSNAGGY 880
Query: 580 VGFLSDRRRMNVAVTRARR 598
+GFL D RR+NV +TRARR
Sbjct: 881 IGFLGDWRRVNVGLTRARR 899
>gi|169615114|ref|XP_001800973.1| hypothetical protein SNOG_10712 [Phaeosphaeria nodorum SN15]
gi|160702890|gb|EAT82106.2| hypothetical protein SNOG_10712 [Phaeosphaeria nodorum SN15]
Length = 1078
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 149/448 (33%), Positives = 233/448 (52%), Gaps = 44/448 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ K++ K + ++ GPPGTGKT T II K S++L CA SN+AVD
Sbjct: 441 LNGSQINAV-KSVLQKPLSLIQGPPGTGKTVTSATIIYHLCKISASQVLVCAPSNVAVDQ 499
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ ER+ ++ VR+ +R + +ES + SL +R M N +L
Sbjct: 500 LCERIHLTGLKTVRVTAKSR---EDVESPVGFL-------SLHEQVR--MNDTNVEL--- 544
Query: 316 KDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
N +++ ++ LS ++E+K +QL A +++ ADV+ T GA +L F
Sbjct: 545 ---NKLNQLKSDVGELSSQDEKKFKQLTRAAEREILNAADVICCTCVGAGDPRLSKMKFR 601
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A GL ++LFERL L
Sbjct: 602 TVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAATAGLNQSLFERLVIL 661
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS---------STEPTLLL 481
+ L VQYRMH + + S Y ++ + +R + P +
Sbjct: 662 GCSPIR--LQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIRRDVDFPWPVADSPMMFW 719
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVL 537
++ EE S +N EA+ R ++GV DIGIITPY Q V
Sbjct: 720 SNLGA---EEISASGTSYLNRTEAQNVEKIVTRFFKAGVQPGDIGIITPYEGQRSYVVSS 776
Query: 538 LKILRS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
++ S K + K++EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRA
Sbjct: 777 MQATGSFKKENYKDVEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 836
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+ ++ + + +S L+ +F+E
Sbjct: 837 KYGLVILGNPKVLSKHPLWHYLLLHFKE 864
>gi|345491346|ref|XP_003426577.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Nasonia vitripennis]
Length = 1127
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 153/465 (32%), Positives = 231/465 (49%), Gaps = 62/465 (13%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSKILACAASNIAVD 254
+L+ SQ A+ A+ + + ++ GPPGTGKT T I+ Q VK+ G +L CA SN AVD
Sbjct: 455 DLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVD 513
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
+ E++ +++VRL +R A+D+ V AL+ ++
Sbjct: 514 QLTEKIHKSNLKVVRLCAKSR-------EAIDSPV--------------SFLALHNQI-- 550
Query: 315 TKDKNTRREIQK------ELRTLSKEERKRQQL----AVTDVIKNADVVLTTLTGAVSRK 364
K+ T E+QK E LS + KR +L A ++++ ADV+ T GA +
Sbjct: 551 -KNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPR 609
Query: 365 LDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTL 423
L F ++IDE+ QA E C + ++ G++ IL GDH QL P V +A + GL ++L
Sbjct: 610 LHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL 669
Query: 424 FERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLID 483
FERL L L VQYRMH + + S Y ++ +GV + E LL ID
Sbjct: 670 FERLVVL--GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQ---NGV---CADERKLLKID 721
Query: 484 IAGC------------DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPY 531
EE S +N EA R ++ GV IG+ITPY
Sbjct: 722 FPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQIGVITPY 781
Query: 532 AAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR 586
Q V ++ S KL + +EV++VD FQGREK+ II+S VRSN + +GFL+D
Sbjct: 782 EGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP 841
Query: 587 RRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
RR+NVA+TRA+ +V + + +S L+ +++E + G
Sbjct: 842 RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEG 886
>gi|299743534|ref|XP_001835836.2| helicase sen1 [Coprinopsis cinerea okayama7#130]
gi|298405699|gb|EAU85901.2| helicase sen1 [Coprinopsis cinerea okayama7#130]
Length = 1960
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 157/505 (31%), Positives = 246/505 (48%), Gaps = 88/505 (17%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIIL---------------QEVKRGS 241
++ Q AI A++S ++ GPPGTGKT+T+ ++ +EV
Sbjct: 1289 INEPQATAIIGAMASTGFVLIQGPPGTGKTSTICALVARFMSRRAIPITAPGSKEVPAKP 1348
Query: 242 KILACAASNIAVDNIVERLVP--------HRVRLVRLGHPARLLPQVLESALDA------ 287
KIL CA SN A+D I +RL ++ +VR+G + V +LD+
Sbjct: 1349 KILICAPSNAAIDEIAQRLKAKYCDGDPVKKLSIVRMGAQGSIGSAVKGVSLDSLVQDKI 1408
Query: 288 QVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEE------------ 335
Q G+ ++ +++ L K+ K+ R E KE+ L
Sbjct: 1409 QEETGNQGFPTEELNRQISML--KMEMESLKHARDEKLKEMTNLQNNYARHNALDQETQA 1466
Query: 336 --RKRQQLAVT------------------------DVIKNADVVLTTLTGAVSRKLDNTS 369
RKRQ LA ++I++ADV+ +TL+G+ L + +
Sbjct: 1467 MGRKRQALAAELNKLRDKLKSDGRSMEALRRKARFEIIRDADVICSTLSGSGHEALLDQT 1526
Query: 370 FDLVIIDEAAQALEIACWIAL-LKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
F++VIIDEAAQA+E++ I L + RCI+ GD QLPPTV S +A K ++LF+R
Sbjct: 1527 FEMVIIDEAAQAVELSSLIPLKYESKRCIMVGDPQQLPPTVISQQAASKKYDQSLFQRFF 1586
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSG---VKRTSSTEPTLLLIDIA 485
+ +L++QYRMH I + SK YN +I+ P+ R EP L + I
Sbjct: 1587 K-KSPKAVHLLSIQYRMHPEISRFPSKAFYNDRIQDGPNMKELTARPWHAEPLLGIYKIF 1645
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLI----QSGVHASDIGIITPYAAQVVLLKIL 541
+ ++ ++S N E EVA A +RL + G+ IGI++PY AQ+ L+
Sbjct: 1646 NVNGNAEEGPQNSLKNRAEVEVATALYRRLSTQFREFGLE-RKIGIVSPYRAQIKELE-- 1702
Query: 542 RS-----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSK-KEVGFLSDRRRMNVAVTR 595
RS L ++ +TVDGFQG+EK+ II+S VR K +GF++D RR+NVA+TR
Sbjct: 1703 RSFFQAFGQSVLDEIDFNTVDGFQGQEKDIIILSCVRGGPGVKSIGFMADVRRLNVAITR 1762
Query: 596 ARRQCCLVCDTETVS-SDGFLKRLI 619
A+ ++ + T+ S+ K+ I
Sbjct: 1763 AKSALFILGNVPTLERSESIWKQAI 1787
>gi|392567037|gb|EIW60212.1| ATP dependent helicase, partial [Trametes versicolor FP-101664 SS1]
Length = 1084
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 149/452 (32%), Positives = 231/452 (51%), Gaps = 39/452 (8%)
Query: 178 EQKPTVLKKDIAFK---PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIIL 234
E +P VL+ + + P L+HSQ A+ K++ K + ++ GPPGTGKT T I+
Sbjct: 424 ELEPQVLRTQMPKRFSAPGLPELNHSQMFAV-KSVLQKPLSLIQGPPGTGKTVTSASIVY 482
Query: 235 QEVKRG-SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGD 293
K ++L CA SN+AVD + E++ +++VRL +R + L+S++ L
Sbjct: 483 HLAKMNPGQVLVCAPSNVAVDQLTEKIHATGLKVVRLSAKSR---EALDSSVSFLTLHQQ 539
Query: 294 NSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQL---AVTDVIKNA 350
++ + + + KL++ K++ Q EL S +ERK + L +++ A
Sbjct: 540 VANNTTHVELQ------KLIQLKNE------QGELS--SNDERKYKALIRQCEKEILGVA 585
Query: 351 DVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTV 409
DV+ T GA +L F V+IDEA QA E C I L+ G + +L GDH QL P +
Sbjct: 586 DVICCTCVGAGDPRLSKLKFRTVLIDEATQAAEPECMIPLILGCKQVVLVGDHQQLGPVI 645
Query: 410 QSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGV 469
+ +A + GL ++LFERL L + L VQYRMH + + S Y ++ +
Sbjct: 646 MNKKAARAGLTQSLFERLVVLGNRPI--RLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAP 703
Query: 470 KRTSSTE------PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHAS 523
+R P + EE S +N EA + +SGV S
Sbjct: 704 ERLRKNVDFPWPVPDTPMFFYQNLGQEEISSSGTSFLNRTEASNVEKIVTKFFKSGVVPS 763
Query: 524 DIGIITPYAAQ----VVLLKILRS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKK 578
IG+ITPY Q V ++ S K D K +EV++VD FQGREK+ II+S VRSN +
Sbjct: 764 QIGVITPYEGQRSYIVNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQ 823
Query: 579 EVGFLSDRRRMNVAVTRARRQCCLVCDTETVS 610
+GFL+D RR+NVA+TRA+ ++ + + +S
Sbjct: 824 GIGFLNDPRRLNVALTRAKYGVVILGNPKVLS 855
>gi|345491350|ref|XP_001604124.2| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Nasonia vitripennis]
Length = 1105
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 153/465 (32%), Positives = 231/465 (49%), Gaps = 62/465 (13%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSKILACAASNIAVD 254
+L+ SQ A+ A+ + + ++ GPPGTGKT T I+ Q VK+ G +L CA SN AVD
Sbjct: 442 DLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVD 500
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
+ E++ +++VRL +R A+D+ V AL+ ++
Sbjct: 501 QLTEKIHKSNLKVVRLCAKSR-------EAIDSPV--------------SFLALHNQI-- 537
Query: 315 TKDKNTRREIQK------ELRTLSKEERKRQQL----AVTDVIKNADVVLTTLTGAVSRK 364
K+ T E+QK E LS + KR +L A ++++ ADV+ T GA +
Sbjct: 538 -KNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPR 596
Query: 365 LDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTL 423
L F ++IDE+ QA E C + ++ G++ IL GDH QL P V +A + GL ++L
Sbjct: 597 LHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL 656
Query: 424 FERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLID 483
FERL L L VQYRMH + + S Y ++ +GV + E LL ID
Sbjct: 657 FERLVVL--GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQ---NGV---CADERKLLKID 708
Query: 484 IAGC------------DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPY 531
EE S +N EA R ++ GV IG+ITPY
Sbjct: 709 FPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQIGVITPY 768
Query: 532 AAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR 586
Q V ++ S KL + +EV++VD FQGREK+ II+S VRSN + +GFL+D
Sbjct: 769 EGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP 828
Query: 587 RRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
RR+NVA+TRA+ +V + + +S L+ +++E + G
Sbjct: 829 RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEG 873
>gi|355767117|gb|EHH62580.1| hypothetical protein EGM_20966 [Macaca fascicularis]
Length = 1041
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 144/447 (32%), Positives = 224/447 (50%), Gaps = 33/447 (7%)
Query: 200 SQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVDNIVE 258
S++ A + + + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD + E
Sbjct: 396 SRRRASPTSTTPRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTE 455
Query: 259 RLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKLLKTK 316
++ +++VRL +R A+D+ V +L + IR M L KL + K
Sbjct: 456 KIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KLQQLK 504
Query: 317 DKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIID 376
D+ E K R ++ A +++ NADV+ T GA +L F ++ID
Sbjct: 505 DETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILID 559
Query: 377 EAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEV 435
E+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L +
Sbjct: 560 ESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPI 619
Query: 436 TSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIAGCDM 489
L VQYRMH + + S Y ++ + R +P +
Sbjct: 620 R--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQ 677
Query: 490 EEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKILRSKD 545
EE S +N EA +L+++G IGIITPY Q V ++ S
Sbjct: 678 EEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLH 737
Query: 546 DKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVC 604
KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR +V
Sbjct: 738 TKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVG 797
Query: 605 DTETVSSDGFLKRLIEYFEEHAEYLSG 631
+ + +S L+ Y++E + G
Sbjct: 798 NPKALSKQPLWNHLLNYYKEQKVLVEG 824
>gi|345491348|ref|XP_003426578.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Nasonia vitripennis]
Length = 1121
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 153/465 (32%), Positives = 231/465 (49%), Gaps = 62/465 (13%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSKILACAASNIAVD 254
+L+ SQ A+ A+ + + ++ GPPGTGKT T I+ Q VK+ G +L CA SN AVD
Sbjct: 455 DLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVD 513
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
+ E++ +++VRL +R A+D+ V AL+ ++
Sbjct: 514 QLTEKIHKSNLKVVRLCAKSR-------EAIDSPV--------------SFLALHNQI-- 550
Query: 315 TKDKNTRREIQK------ELRTLSKEERKRQQL----AVTDVIKNADVVLTTLTGAVSRK 364
K+ T E+QK E LS + KR +L A ++++ ADV+ T GA +
Sbjct: 551 -KNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPR 609
Query: 365 LDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTL 423
L F ++IDE+ QA E C + ++ G++ IL GDH QL P V +A + GL ++L
Sbjct: 610 LHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL 669
Query: 424 FERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLID 483
FERL L L VQYRMH + + S Y ++ +GV + E LL ID
Sbjct: 670 FERLVVL--GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQ---NGV---CADERKLLKID 721
Query: 484 IAGC------------DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPY 531
EE S +N EA R ++ GV IG+ITPY
Sbjct: 722 FPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQIGVITPY 781
Query: 532 AAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR 586
Q V ++ S KL + +EV++VD FQGREK+ II+S VRSN + +GFL+D
Sbjct: 782 EGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP 841
Query: 587 RRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
RR+NVA+TRA+ +V + + +S L+ +++E + G
Sbjct: 842 RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEG 886
>gi|323307726|gb|EGA60989.1| Nam7p [Saccharomyces cerevisiae FostersO]
Length = 971
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 172/561 (30%), Positives = 273/561 (48%), Gaps = 73/561 (13%)
Query: 110 GQGVVYRLKDSSITVAFDDI-----------PEEGLNSPLRLEKLANEVTYRRMKDALIQ 158
G+G + RL +S F D P L + E + +Y RM+DAL +
Sbjct: 313 GRGYIVRLPNS-----FQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKK 367
Query: 159 LSKGVQNGPAAGLIPV-LFGEQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSK 212
+ + +G + + G Q + L K+ + F + L+ SQ +A+S L +
Sbjct: 368 FA--IDKKSISGYLYYKILGHQVVDISFDVPLPKEFSIPNF-AQLNSSQSNAVSHVLQ-R 423
Query: 213 NVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLG 271
+ ++ GPPGTGKT T I+ K +IL C SN+AVD++ +L +++VRL
Sbjct: 424 PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCXPSNVAVDHLAAKLRDLGLKVVRLT 483
Query: 272 HPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTL 331
+R + +ES++ N +L + + + K LLK KD E+ L
Sbjct: 484 AKSR---EDVESSVS-------NLALHNLVGRGAKGELKNLLKLKD---------EVGEL 524
Query: 332 SKEERKRQQLAV----TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACW 387
S + KR V +++ ADVV T GA ++LD T F V+IDE+ QA E C
Sbjct: 525 SASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRLD-TKFRTVLIDESTQASEPECL 583
Query: 388 IALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMH 446
I ++KG++ IL GDH QL P + +A GL ++LFERL L V L VQYRM+
Sbjct: 584 IPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL--GHVPIRLEVQYRMN 641
Query: 447 EHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT---------LLLIDIAGCDMEEKKDEED 497
++ + S Y ++ +GV T P + ++ A EE
Sbjct: 642 PYLSEFPSNMFYEGSLQ---NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGT 698
Query: 498 STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILR-----SKDDKLKNM 551
S +N EA +L + GV IG+ITPY Q +L+ ++ KD +K +
Sbjct: 699 SFLNRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIK-V 757
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
EV++VD FQGREK+ II+S VR+N ++ +GFL D RR+NV +TRA+ ++ + +++
Sbjct: 758 EVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLAR 817
Query: 612 DGFLKRLIEYFEEHAEYLSGS 632
+ L+ +F E + G+
Sbjct: 818 NTLWNHLLIHFREKGCLVEGT 838
>gi|195446723|ref|XP_002070897.1| GK25498 [Drosophila willistoni]
gi|194166982|gb|EDW81883.1| GK25498 [Drosophila willistoni]
Length = 1208
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 151/485 (31%), Positives = 240/485 (49%), Gaps = 34/485 (7%)
Query: 160 SKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHG 219
S+ + +G G VLF +P + P L+ SQ A+ AL + + ++ G
Sbjct: 425 SRLLGHGRPDGTDEVLFRGPQPKLYSA-----PHLPELNRSQVYAVKHALQ-RPLSLIQG 478
Query: 220 PPGTGKTTTVVEIILQEVKR-GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLP 278
PPGTGKT T I+ Q VK+ G +L CA SN AVD + E++ +++VR+ +R
Sbjct: 479 PPGTGKTVTSATIVYQLVKQHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSR--- 535
Query: 279 QVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKR 338
+ ++S + L S++ ++ E+K KL + KD+ E R S +
Sbjct: 536 EAIDSPVSFLALHNQISNIKANT--ELK----KLQQLKDETGELSSADEKRYRSLKRSTE 589
Query: 339 QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CI 397
QL ++ ADV+ T GA +L F ++IDE+ Q+ E C + ++ G++ I
Sbjct: 590 NQL-----LEAADVICCTCVGAGDGRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLI 644
Query: 398 LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQL 457
L GDH QL P V +A + GL ++LFERL L L VQYRMH + + S
Sbjct: 645 LVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR--LEVQYRMHPELSQFPSNFF 702
Query: 458 YNSKIKAHPSGVKRT-----SSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHA 512
Y ++ R +P + + EE S +N EA
Sbjct: 703 YEGSLQNGVCAEDRRLKLDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKIT 762
Query: 513 KRLIQSGVHASDIGIITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAI 567
R +++GV IGIITPY Q V ++ S +L + +E+++VD FQGREK+ I
Sbjct: 763 TRFLKAGVKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDII 822
Query: 568 IISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAE 627
I+S VRSN ++ +GFL+D RR+NVA+TRA+ +V + + +S L+ ++++
Sbjct: 823 IMSCVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQQLWNHLLNFYKDRKV 882
Query: 628 YLSGS 632
+ GS
Sbjct: 883 LVEGS 887
>gi|281210252|gb|EFA84419.1| helicase [Polysphondylium pallidum PN500]
Length = 1113
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 147/443 (33%), Positives = 216/443 (48%), Gaps = 31/443 (6%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTT----VVEIILQEVKRGSKILACAASNIA 252
L++SQ A K L S + ++ GPPGTGKT V I+ +K+ K+L CA SN+A
Sbjct: 518 LNNSQISAAMKVLKSP-LSLIQGPPGTGKTVVSSFIVHHIVKHAIKKNEKVLVCAPSNVA 576
Query: 253 VDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKL 312
+D + +L +++VRL R + + S ++ L L S R E+ K
Sbjct: 577 IDQLTGKLHSIGLKVVRLCSKLR---EEVASPVEHLTLHHQVWQLDSHGRGEL----AKF 629
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ + R + KR A + ++K ADV+ TT GA +L F
Sbjct: 630 KQLKDEQGELSTNDDHRYFA---LKRH--AESKILKEADVIATTCVGAGDPRLSKLKFPY 684
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
V+IDE+ QA E C I L+ G++ +L GDH QL P + + + + GL ++LFERL +L
Sbjct: 685 VLIDESTQASEPECLIPLMLGAKQVVLVGDHCQLGPVLLAKKVIEAGLSQSLFERLINL- 743
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
LT QYRMH + + S Y ++ S R + P +
Sbjct: 744 -GHHPFRLTTQYRMHPSLSEFPSSTFYEGQLVNELSYKDRVYNDIKFPWPSPNNPMFFYN 802
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKD 545
EE S +N EA +L++ G IGIITPY Q L K
Sbjct: 803 STGAEEISSSGTSFINRMEASTTEKIVTKLLELGTKPHQIGIITPYEGQRSFLVNNMQKT 862
Query: 546 DKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
KL + +EV++VD FQGREK+ II+S VRSN + +GFL D RR+NVA+TRAR
Sbjct: 863 GKLSIELYREIEVASVDSFQGREKDFIILSCVRSNDNQGIGFLHDPRRLNVALTRARYGL 922
Query: 601 CLVCDTETVSSDGFLKRLIEYFE 623
++ + +S D LI +F+
Sbjct: 923 IILGNARVLSRDQLWNNLICHFK 945
>gi|427788499|gb|JAA59701.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 1125
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 141/446 (31%), Positives = 233/446 (52%), Gaps = 38/446 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVDN 255
L+ SQ A+ AL + + ++ GPPGTGKT T ++ K+ + +L CA SNIAVD
Sbjct: 452 LNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATVVYHLAKQSTGPVLVCAPSNIAVDQ 510
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +R+VRL +R AL++ V S LA + ++++++G
Sbjct: 511 LTEKVHQTGLRVVRLCAKSR-------EALNSPV-----SFLA--LHNQIRSMDGH---- 552
Query: 316 KDKNTRREIQKELRTLSKEERKRQQL----AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+ + ++++ E LS + KR ++ ++++ ADV+ T GA +L F
Sbjct: 553 SELHKLQQLKDETGELSSADEKRYRMLKKACERELLEAADVICCTCVGAGDPRLARFKFH 612
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
++IDE+ QA E C + ++ G++ IL GDH QL P V +A + GL ++LFERL L
Sbjct: 613 SILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 672
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT------SSTEPTLLLIDI 484
+ L VQYRMH + + S Y ++ +R +P ++
Sbjct: 673 GIRPLR--LEVQYRMHPQLAQFPSNFFYEGSLQNGVFADERRMRGLDFPWPQPERPMLFY 730
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKI 540
A EE S +N EA + R ++SGV +G+ITPY Q V ++
Sbjct: 731 ACQGQEEMAGSGTSYLNRTEAALVEKICTRFLRSGVKPQQVGVITPYEGQRAYLVQHMQF 790
Query: 541 LRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 599
+ KL + +EV++VD FQGREK+ I++S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 791 QGALHSKLYQEIEVASVDAFQGREKDLIVMSCVRSNEHQGIGFLNDPRRLNVALTRARYG 850
Query: 600 CCLVCDTETVSSDGFLKRLIEYFEEH 625
+V + + +S L+ +++E+
Sbjct: 851 LIIVGNPKVLSKQPLWNHLLTFYKEN 876
>gi|323347166|gb|EGA81441.1| Nam7p [Saccharomyces cerevisiae Lalvin QA23]
Length = 971
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 172/561 (30%), Positives = 273/561 (48%), Gaps = 73/561 (13%)
Query: 110 GQGVVYRLKDSSITVAFDDI-----------PEEGLNSPLRLEKLANEVTYRRMKDALIQ 158
G+G + RL +S F D P L + E + +Y RM+DAL +
Sbjct: 313 GRGYIVRLPNS-----FQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKK 367
Query: 159 LSKGVQNGPAAGLIPV-LFGEQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSK 212
+ + +G + + G Q + L K+ + F + L+ SQ +A+S L +
Sbjct: 368 FA--IDKKSISGYLYYKILGHQVVDISFDVPLPKEFSIPNF-AQLNSSQSNAVSHVLQ-R 423
Query: 213 NVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLG 271
+ ++ GPPGTGKT T I+ K +IL CA SN+AVD++ +L +++VRL
Sbjct: 424 PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLT 483
Query: 272 HPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTL 331
+R + +ES++ N +L + + + K LLK KD E+ L
Sbjct: 484 AKSR---EDVESSVS-------NLALHNLVGRGAKGELKNLLKLKD---------EVGEL 524
Query: 332 SKEERKRQQLAV----TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACW 387
S + KR V +++ ADVV T GA ++LD T F V+IDE+ QA C
Sbjct: 525 SASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRLD-TKFRTVLIDESTQASXPECL 583
Query: 388 IALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMH 446
I ++KG++ IL GDH QL P + +A GL ++LFERL L V L VQYRM+
Sbjct: 584 IPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISL--GHVPIRLEVQYRMN 641
Query: 447 EHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT---------LLLIDIAGCDMEEKKDEED 497
++ + S Y ++ +GV T P + ++ A EE
Sbjct: 642 PYLSEFPSNMFYEGSLQ---NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGT 698
Query: 498 STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILR-----SKDDKLKNM 551
S +N EA +L + GV IG+ITPY Q +L+ ++ KD +K +
Sbjct: 699 SFLNRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIK-V 757
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
EV++VD FQGREK+ II+S VR+N ++ +GFL D RR+NV +TRA+ ++ + +++
Sbjct: 758 EVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLAR 817
Query: 612 DGFLKRLIEYFEEHAEYLSGS 632
+ L+ +F E + G+
Sbjct: 818 NTLWNHLLIHFREKGCLVEGT 838
>gi|67484740|ref|XP_657590.1| tRNA splicing endonuclease [Entamoeba histolytica HM-1:IMSS]
gi|56474851|gb|EAL52205.1| tRNA splicing endonuclease, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449709011|gb|EMD48361.1| splicing endonuclease positive effector sen1, putative [Entamoeba
histolytica KU27]
Length = 1140
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 180/560 (32%), Positives = 269/560 (48%), Gaps = 129/560 (23%)
Query: 166 GPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGK 225
P+ G+ FG+ T+ + +I FNS SQ + I+ ALS K ++ GPPGTGK
Sbjct: 267 SPSNGI----FGKYLQTMKETNI----FNS----SQIECINSALSKKGFSLIQGPPGTGK 314
Query: 226 TTTVVEII--------LQEVKRG------SKILACAASNIAVDNIVERLV---------- 261
T T++ I+ + K+G SKIL CA SN AVD IV R+
Sbjct: 315 TKTLLGILGAIIFGKPVSFNKQGTIKMKHSKILVCAPSNAAVDEIVLRIQNEGILNGNGK 374
Query: 262 PHRVRLVRLGHPARLLPQVLESALDAQV-----LRGDN--------SSLASDIRKEMKAL 308
+V ++R+G+ A + +V E +D + RG N SS + I ++M+AL
Sbjct: 375 KQKVNIIRIGNYAGINSKVNEVLIDTLISNELIKRGYNEQKRTENVSSKIASIEQKMRAL 434
Query: 309 NGKL-----------------LKTKDKNTRREIQKELRTLSKEERKRQQLAVT------- 344
++ K DK R I K +TL + KR VT
Sbjct: 435 TKEIEDTTIALNNEKEKVVSSTKENDKKINR-IHKYTQTLKEMNNKRDAFRVTLQQMKSE 493
Query: 345 -----------------DVIKNADVVLTTLT--------GAVSRKLDNTSFDLVIIDEAA 379
+ + AD++ TL + K++N VIIDEAA
Sbjct: 494 KGKIQRDFAKIRKEITKQLFEEADILCCTLNTSGSDIFLNCIKEKIEN-----VIIDEAA 548
Query: 380 QALEIACWIALLKGS-RCILAGDHLQLPPTVQSVEAEKKGLGRTLFERL--ADLYGDEVT 436
Q++EI+ I L G+ RCIL GD QLP TV SV A+ G R+LFERL ++ D
Sbjct: 549 QSVEISTLIPLRFGAERCILIGDPQQLPATVISVAAQNSGYDRSLFERLYKCGVFVD--- 605
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSKI------KAHPSGVKRTSSTEPTLLLIDIAGCDME 490
ML +QYRMH I + S Q Y+ ++ P + + ++ D G +E
Sbjct: 606 -MLKIQYRMHPLIREFPSNQFYSGELIDGRDESILPCSIDKGFGP---VVFYDACG-GLE 660
Query: 491 EKKDEEDSTMNEGEAEVAMAHAKRLIQS--GVHASDIGIITPYAAQVVLLKILRSKDDKL 548
E+ + + NE E ++ + + LI+ DIGI+TPY Q++L+K+ L
Sbjct: 661 ERVGQ--TLANEVEVQIVIGLLEGLIKKYPNCKEWDIGIVTPYRQQLLLIKMAIETSLLL 718
Query: 549 KNME---VSTVDGFQGREKEAIIISMVRSNS-KKEVGFLSDRRRMNVAVTRARRQCCLVC 604
K+M V+T+DGFQGRE + II S VRS+ K +GFLSD RRMNVA+TRA+ ++
Sbjct: 719 KDMSKLCVNTIDGFQGREMDIIIFSCVRSSQIKPSIGFLSDIRRMNVALTRAKNALWVIG 778
Query: 605 DTETVSSDGFLKRLIEYFEE 624
++ T+ ++ K+ IE+ +E
Sbjct: 779 NSNTLCTNKTWKQYIEWLKE 798
>gi|195043318|ref|XP_001991595.1| GH11976 [Drosophila grimshawi]
gi|193901353|gb|EDW00220.1| GH11976 [Drosophila grimshawi]
Length = 1276
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 150/485 (30%), Positives = 241/485 (49%), Gaps = 34/485 (7%)
Query: 160 SKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHG 219
S+ + +G A G VLF +P + P +L+ SQ A+ AL + + ++ G
Sbjct: 446 SRLLGHGRADGSDEVLFRGPQPKLYSA-----PHLPDLNRSQVYAVKHALQ-RPLSLIQG 499
Query: 220 PPGTGKTTTVVEIILQEVKR-GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLP 278
PPGTGKT T I+ Q VK+ G +L CA SN AVD + E++ +++VR+ +R
Sbjct: 500 PPGTGKTVTSATIVYQLVKQHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSR--- 556
Query: 279 QVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKR 338
+ ++S + L ++ ++ E+K KL + KD+ E R S +
Sbjct: 557 EAIDSPVSFLALHNQIRNMETN--SELK----KLQQLKDETGELSSADEKRYRSLKRATE 610
Query: 339 QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CI 397
QL ++ ADV+ T GA +L F ++IDE+ Q+ E C + ++ G++ I
Sbjct: 611 NQL-----LEAADVICCTCVGAGDVRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLI 665
Query: 398 LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQL 457
L GDH QL P V +A + GL ++LFERL L L VQYRMH + + S
Sbjct: 666 LVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR--LEVQYRMHPELSQFPSNFF 723
Query: 458 YNSKIKAHPSGVKR-----TSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHA 512
Y ++ R +P + + EE S +N EA
Sbjct: 724 YEGSLQNGVCAEDRRLKLDFPWPQPDRPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKIT 783
Query: 513 KRLIQSGVHASDIGIITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAI 567
R +++G+ IGIITPY Q V ++ S +L + +E+++VD FQGREK+ I
Sbjct: 784 TRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDII 843
Query: 568 IISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAE 627
I+S VRSN ++ +GFL+D RR+NVA+TRA+ +V + + +S L+ ++++
Sbjct: 844 IMSCVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQQLWNHLLNFYKDRKV 903
Query: 628 YLSGS 632
+ GS
Sbjct: 904 LVEGS 908
>gi|312373027|gb|EFR20858.1| hypothetical protein AND_18385 [Anopheles darlingi]
Length = 1161
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 154/505 (30%), Positives = 254/505 (50%), Gaps = 36/505 (7%)
Query: 147 VTYRRMKDALIQLS---KGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNS----NLDH 199
++ RM+ AL + + K V N + L+ + + VL + K F++ +L+
Sbjct: 401 TSFERMQQALRKFAMDAKSVSNYIYSRLLGNVRADGNEEVLFRFTLPKHFSAPNLPDLNR 460
Query: 200 SQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVDNIVE 258
SQ A+ AL + + ++ GPPGTGKT T I+ Q K S IL CA SN AVD + E
Sbjct: 461 SQVYAVRHALQ-RPLSLIQGPPGTGKTVTSATIVYQLAKLNSGPILVCAPSNTAVDQLTE 519
Query: 259 RLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDK 318
++ +++VR+ +R + ++S + L ++A + E+K KL + KD+
Sbjct: 520 KIHRTNLKVVRVCARSR---EAIDSPVSYLALHNQIRNMAQNT--ELK----KLQQLKDE 570
Query: 319 NTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEA 378
+ E R S +++ ++L ++ ADV+ T GA +L F+ ++IDE+
Sbjct: 571 TGELSLSDERRYRSLKKQAEREL-----LEAADVICCTCVGAGDLRLQRLKFNSILIDES 625
Query: 379 AQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS 437
Q+ E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 626 MQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVAL--GIRPF 683
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTE-----PTLLLIDIAGCDMEEK 492
L VQYRMH + + S Y ++ +R + P + + EE
Sbjct: 684 RLEVQYRMHPELSQFPSNFFYEGSLQNGVCADERKLKVDFPWPSPDCPMFFLVTQGQEEI 743
Query: 493 KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKILRSKDDKL 548
S +N EA R +++G+ IGIITPY Q V ++ S KL
Sbjct: 744 AGSGTSYLNRTEASNVEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSKL 803
Query: 549 -KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTE 607
+ +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRA+ +V + +
Sbjct: 804 YQEIEIASVDAFQGREKDIIIMSCVRANEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPK 863
Query: 608 TVSSDGFLKRLIEYFEEHAEYLSGS 632
+S L+ ++++ + GS
Sbjct: 864 VLSKQELWNHLLNFYKDKKVLVEGS 888
>gi|71003407|ref|XP_756384.1| hypothetical protein UM00237.1 [Ustilago maydis 521]
gi|46095821|gb|EAK81054.1| hypothetical protein UM00237.1 [Ustilago maydis 521]
Length = 1088
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 146/445 (32%), Positives = 227/445 (51%), Gaps = 44/445 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+HSQ +A+ K++ K + ++ GPPGTGKT T I+ Q K +L CA SN+AVD
Sbjct: 480 LNHSQVNAV-KSVLQKPLSLIQGPPGTGKTVTSATIVYQLSKMNPGPVLVCAPSNVAVDQ 538
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQV--LRGDNSSLASDIRKEMKALNGKLL 313
+ E++ +++VRL +R ALD + L +D E++ KL+
Sbjct: 539 LTEKIHLTGLKVVRLTAKSR-------EALDGPISFLTLHEQVANNDTNIELQ----KLI 587
Query: 314 KTKDKNTRREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSF 370
+ K++ Q EL S +ERK + L +++ ADV+ T G +L F
Sbjct: 588 QLKNE------QGELS--SSDERKYKALTRACEKEILSTADVICCTCVGCGDPRLSKIKF 639
Query: 371 DLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V++DEA QA E C I L+ + GDHLQL P + + + + G ++LFERL L
Sbjct: 640 RTVLVDEATQAAEPECMIPLV-----VFVGDHLQLGPVIMNKKVARAGASQSLFERLIML 694
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT------SSTEPTLLLIDI 484
+ L VQYRMH + + S Y ++ + +R P+L ++
Sbjct: 695 GNRPIR--LQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKDVDFPWPVPSLPMLFF 752
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKI 540
EE S +N EA R ++GV S IGI+TPY Q V +++
Sbjct: 753 QNLGQEEISSSGTSFLNRTEAANVEKIVTRFFKAGVKPSQIGIVTPYEGQRSYIVNHMQL 812
Query: 541 LRS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 599
S K + K++EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRAR
Sbjct: 813 HGSLKKELYKDVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVALTRARFG 872
Query: 600 CCLVCDTETVSSDGFLKRLIEYFEE 624
++ + + ++ L+ +++E
Sbjct: 873 LVILGNPKVLNKHPLWHYLLVHYKE 897
>gi|284167544|ref|YP_003405822.1| Superfamily I DNA and RNA helicase and helicase subunits-like
protein [Haloterrigena turkmenica DSM 5511]
gi|284017199|gb|ADB63149.1| Superfamily I DNA and RNA helicase and helicase subunits-like
protein [Haloterrigena turkmenica DSM 5511]
Length = 752
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 220/426 (51%), Gaps = 69/426 (16%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNI 256
L+ Q+ A+S AL + ++F +HGPPGTGKT T+VE++ + V+ G +L CA SN AVDN+
Sbjct: 344 LNQEQELAVSCALLADHLFCIHGPPGTGKTRTLVEVVRRSVEAGDDVLVCADSNQAVDNL 403
Query: 257 VERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK 316
V G +++ +D R +L+
Sbjct: 404 VA---------------------------------GSSTAATADER----SLHAYAQHGA 426
Query: 317 DKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIID 376
D+ R + S + ++ A D ADVV T + A + LD FD++++D
Sbjct: 427 DEFVLRRVNA---GNSSNDVVSERYATCD--GRADVVAATNSSAAT--LDR-EFDVLVLD 478
Query: 377 EAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGD--- 433
EA QA A I L + ++ +LAGDH QLPP + + + G +LFE LY D
Sbjct: 479 EATQATCTASCIPLARANKVVLAGDHKQLPPFSATEDPPESAAGMSLFEH---LYADGGV 535
Query: 434 --EVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS-STEPTLLLIDIAGCDME 490
V L QYRMH I +S+++ Y+ ++ G TS +P L+ D+ G E
Sbjct: 536 YEGVGVQLRTQYRMHRDIAWFSNRRFYDRALR---QGRDVTSLEDQPALVGYDVGGS--E 590
Query: 491 EKKDEEDSTMNEGEAEVAMAHAKRL-IQSGVHASDIGIITPYAAQVVLLKI-LRSKDDKL 548
E D S N+ EA + L ++G+ ASDIG+ITPY AQV ++ L ++ ++
Sbjct: 591 ETIDH--SKRNDAEARLVAHVVDELRTEAGLEASDIGVITPYTAQVDAVRTKLTTRLERG 648
Query: 549 KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR-----RRMNVAVTRARRQCCLV 603
+ + V T+D FQG EK AI+IS+VRSN+ EVGFL DR RR+NVA+TRA R C +V
Sbjct: 649 REVTVDTIDSFQGSEKVAIVISLVRSNADGEVGFL-DRPLDGPRRLNVAMTRAERFCAIV 707
Query: 604 CDTETV 609
D T+
Sbjct: 708 GDWYTL 713
>gi|365989598|ref|XP_003671629.1| hypothetical protein NDAI_0H02120 [Naumovozyma dairenensis CBS 421]
gi|343770402|emb|CCD26386.1| hypothetical protein NDAI_0H02120 [Naumovozyma dairenensis CBS 421]
Length = 993
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 174/564 (30%), Positives = 269/564 (47%), Gaps = 79/564 (14%)
Query: 110 GQGVVYRLKDSSITVAFDDI-----------PEEGLNSPLRLEKLANEVTYRRMKDALIQ 158
G+G + RL +S F D P L + E + +Y RM+D+L +
Sbjct: 323 GRGYIVRLPNS-----FQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDSLKK 377
Query: 159 LSKGVQNGPAAGLIPV-LFGEQKPTVLKKDIAFK---------PFNSNLDHSQKDAISKA 208
+ V +G + + G Q DI F P + L+ SQ A+
Sbjct: 378 FA--VDKKSISGYLYYKILGHQV-----VDITFDVPMPKQFSIPHFTQLNESQSKAVQHV 430
Query: 209 LSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRL 267
L + + ++ GPPGTGKT T I+ K K+L CA SN+AVD++ +L +++
Sbjct: 431 LQ-RPLSLIQGPPGTGKTVTSATIVYHLTKIHKDKVLVCAPSNVAVDHLAAKLRDLGLKV 489
Query: 268 VRLGHPAR--LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQ 325
VRL +R + V AL V RG L KLL+ K+
Sbjct: 490 VRLTAKSREDVESSVSNLALHNLVARGSKGELR------------KLLRLKE-------- 529
Query: 326 KELRTLSKEERKRQQLAV----TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQA 381
E+ LS + KR V ++++ ADVV T GA ++LD T F V+IDE+ QA
Sbjct: 530 -EVGELSASDTKRFVKLVRKTESEILAKADVVCCTCVGAGDKRLD-TKFRTVLIDESTQA 587
Query: 382 LEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLT 440
E C I ++KG++ IL GDH QL P + +A GL ++LFERL L + L
Sbjct: 588 TEPECLIPIVKGAKQVILVGDHKQLGPVILERKAGDAGLKQSLFERLISL--GHIPFRLE 645
Query: 441 VQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT--SSTEPTLL----LIDIAGCDMEEKKD 494
+QYRM+ ++ + S Y ++ + +RT ST P + ++ A EE
Sbjct: 646 IQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVSDSTFPWPIHGVPMMFWANYGREELSS 705
Query: 495 EEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILR-----SKDDKL 548
S +N EA +L + GV IG+ITPY Q +L+ ++ KD +
Sbjct: 706 NGTSYLNRIEAMNCERIITKLFKDGVKPEQIGVITPYEGQRAYILQYMQMNGAMDKDLYV 765
Query: 549 KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTET 608
K +EV++VD FQGREK+ II+S VR+N ++ +GFL D RR+NV +TRA+ ++ + +
Sbjct: 766 K-VEVASVDAFQGREKDYIILSCVRANDQQAIGFLRDPRRLNVGLTRAKYGLVILGNPMS 824
Query: 609 VSSDGFLKRLIEYFEEHAEYLSGS 632
+S + L+ +F E + G+
Sbjct: 825 LSRNLLWNHLLIHFREKGCLVEGT 848
>gi|328865229|gb|EGG13615.1| helicase [Dictyostelium fasciculatum]
Length = 1162
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 171/553 (30%), Positives = 253/553 (45%), Gaps = 53/553 (9%)
Query: 103 DLGSPALGQGVVYRLKDSS-----ITVA-FDDIPEEGLNSPLRLEKLANEVTYRRMKDAL 156
D P G + R+ + S IT+ ++ P S +++ + ++ R+ AL
Sbjct: 441 DYPEPWESSGRITRIDEESEASMEITLELYNHNPPNKSKSKFKIDMVWRSTSFDRILIAL 500
Query: 157 IQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN------SNLDHSQKDAISKALS 210
+ Q+ ++ L L G Q K +P N L+ SQ A L
Sbjct: 501 KAFAIK-QDAISSYLYHALLGHQPDATKVKVTVPQPTNFVLPGLPPLNASQISAACSVLK 559
Query: 211 SKNVFMLHGPPGTGKTTTVVEIILQEVKRG----SKILACAASNIAVDNIVERLVPHRVR 266
S + ++ GPPGTGKT ++ V G K+L CA SN+A+D + +L ++
Sbjct: 560 SP-LSLIQGPPGTGKTLVSAFLVHHLVNHGIKGKEKLLVCAPSNVAIDQLAGKLHSVGLK 618
Query: 267 LVRLGHPAR--LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREI 324
+VRL R + V L QV + D + ++ KAL RE
Sbjct: 619 VVRLCSKLREEVSSPVENLTLHHQVAQLDQ--YGKGVLRKFKAL-------------REE 663
Query: 325 QKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQA 381
EL ++ERK L + +++K ADV+ TT GA +L + F V+IDEA QA
Sbjct: 664 TGELNP--EDERKFLVLKGSLERNILKEADVICTTCVGAGDPRLRDIKFPYVLIDEATQA 721
Query: 382 LEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLT 440
E C I L+ G+R +L GDH QL P + + ++ GL +LFERL L LT
Sbjct: 722 SEPECLIPLVLGARQVVLVGDHCQLGPVLLCKKVQEAGLSLSLFERLIHL--GHHPFRLT 779
Query: 441 VQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST-----EPTLLLIDIAGCDMEEKKDE 495
QYRMH + + S Y ++ S R ++ P + EE
Sbjct: 780 TQYRMHPALSEFPSNTFYEGQLVNEISYRDRVTNNGFVWPHPNRPMFFHNSTGHEEISSS 839
Query: 496 EDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL-----KILRSKDDKLKN 550
S +N EA + R ++ G S IGIITPY Q L + R D K
Sbjct: 840 GTSFINRTEATLCEKIVTRFLELGTKPSQIGIITPYEGQRSFLVNNMQRTGRLPSDLYKE 899
Query: 551 MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVS 610
+EV++VD FQGREK+ II+S VRSN + +GFL D RR+NVA+TRAR ++ + +S
Sbjct: 900 IEVASVDSFQGREKDFIILSCVRSNENQGIGFLQDPRRLNVALTRARYGLIILGNARVLS 959
Query: 611 SDGFLKRLIEYFE 623
D LI +F+
Sbjct: 960 RDLLWNNLISHFK 972
>gi|384486429|gb|EIE78609.1| hypothetical protein RO3G_03313 [Rhizopus delemar RA 99-880]
Length = 1038
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 161/506 (31%), Positives = 256/506 (50%), Gaps = 43/506 (8%)
Query: 148 TYRRMKDALIQLSKGVQNGPAAGLIP--VLFGEQKPTVLKKDIAFK---PFNSNLDHSQK 202
++ RM+ A+ + V +G I +L + +P +LK + + P L+HSQ
Sbjct: 390 SFDRMQSAMKTFA--VDETSVSGYIYHRLLGHDVEPQILKTQMPKRFSAPNLPELNHSQV 447
Query: 203 DAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDNIVERLV 261
A+ K++ K + ++ GPPGTGKT T I+ K ++L CA SN+AVD + E++
Sbjct: 448 YAV-KSVLQKPLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPSNVAVDQLAEKIH 506
Query: 262 PHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTR 321
+++VR+ +R + L+S + L + +D E++ KL+ K
Sbjct: 507 QTGLKVVRVTAKSR---EELDSPVSFLTLHEQVQN--NDTNVELQ----KLIHLKRD--- 554
Query: 322 REIQKELRTLSKEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEA 378
Q EL + +ERK L +++ NADV+ T GA ++ N F V+IDEA
Sbjct: 555 ---QGELS--AADERKYNALKRACEKEILANADVICCTSVGAGDSRIANLRFRTVLIDEA 609
Query: 379 AQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS 437
QA E C I L+ G + +L GDH QL P + + +A + GL ++LFERL L +
Sbjct: 610 TQASEPECMIPLVLGCKQAVLVGDHQQLGPIIMNKKAARAGLCQSLFERLVILGIRPIR- 668
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS----TEPTL--LLIDIAGCDMEE 491
L VQYRMH + + S Y ++ + +R P L ++ A EE
Sbjct: 669 -LQVQYRMHPCLSEFPSNMFYEGTLQNGITTQERIRKDIDFPWPVLETPMMFYANLGNEE 727
Query: 492 KKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKILRS-KDD 546
S +N EA R ++SGV S IG++TPY Q V ++ S + D
Sbjct: 728 ISTSGTSYLNRTEASNCEKIVTRFMKSGVMPSQIGVVTPYEGQRSYIVQYMQFNGSLRKD 787
Query: 547 KLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 606
K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRA+ ++ +
Sbjct: 788 LYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVALTRAKYGVVILGNP 847
Query: 607 ETVSSDGFLKRLIEYFEEHAEYLSGS 632
+ +S L+ +++E + G+
Sbjct: 848 KILSRHPLWHHLLVHYKEKGCLVDGA 873
>gi|354544687|emb|CCE41413.1| hypothetical protein CPAR2_304020 [Candida parapsilosis]
Length = 1049
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 186/650 (28%), Positives = 304/650 (46%), Gaps = 81/650 (12%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
++ PL+ LE + + + S+ L+ Q K + LN + L TL F
Sbjct: 282 QYQQSFGPLVKLEADCDKNLK----ESQALEHIQVKWALGLNNR------HLASFTLSTF 331
Query: 77 QSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS---SITVAFDD---IP 130
++T D+ K D ++L+ + + G GQG + RL +S T+ + P
Sbjct: 332 ETT--DL----KVAVGDEIILRYSGSQ-GDAWQGQGYILRLPNSYQEEFTLELNPSKIAP 384
Query: 131 EEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI----------PVLFGEQK 180
L + E + +Y RM+ A+ + + + + I PV F +
Sbjct: 385 PTHLTTDFTAEFVWKGTSYDRMQQAMKDFA--IDDESVSSFIYHKLLGHDVAPVEFDIEL 442
Query: 181 PTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-R 239
P P + L+ SQ +A+ L + + ++ GPPGTGKT T I+ K
Sbjct: 443 PKRFSH-----PKLTELNISQANAVRSVLQ-RPLSLIQGPPGTGKTVTSATIVYHLSKLN 496
Query: 240 GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLAS 299
KIL CA SN+AVD++ +L +++VRL +R + +ES++ + +L +
Sbjct: 497 KEKILVCAPSNVAVDHLAAKLDLLGLKVVRLTAKSR---EDVESSVG-------HLALHN 546
Query: 300 DIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKR--QQLAVTD--VIKNADVVLT 355
+ K K KL+K K+ E+ LS E+ K+ + L ++ ++ DVV
Sbjct: 547 IVNKTSKGELKKLIKLKN---------EVGELSSEDSKKYIKHLRSSELKILNKCDVVCC 597
Query: 356 TLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEA 414
T GA ++L F V++DE+ QA E I ++KG++ IL GDH QL P + +A
Sbjct: 598 TCVGAADKRLSQFKFRTVLVDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILDRKA 657
Query: 415 EKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR--T 472
GL ++LFERL ++ + L VQYRMH + + S Y ++ + R
Sbjct: 658 ADAGLKQSLFERL--VFLGHIPIRLEVQYRMHPCLSEFPSNMFYEGSLQDGVTNADRLVA 715
Query: 473 SSTEPTLL----LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
S+ P + ++ A EE +S +N EA RL + G+ IG+I
Sbjct: 716 DSSFPWPVVDTPMMFWANYGREELSSSGNSYLNRVEAMNVERIITRLFKDGIKPEQIGVI 775
Query: 529 TPYAAQVVLL-------KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVG 581
TPY Q L L SK D+ +E+++VD FQGREK+ II+S VR+N + +G
Sbjct: 776 TPYEGQRAYLVQFMSMNSTLLSKRDEYLEVEITSVDAFQGREKDFIILSCVRANDSQSIG 835
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
FLSD RR+NVA+TRA+ ++ + +S + L+ +F E + G
Sbjct: 836 FLSDPRRLNVALTRAKYGLLVLGNPRALSRNRLWNHLLVHFREKGCLVDG 885
>gi|50303751|ref|XP_451821.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640953|emb|CAH02214.1| KLLA0B06435p [Kluyveromyces lactis]
Length = 969
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 159/503 (31%), Positives = 254/503 (50%), Gaps = 41/503 (8%)
Query: 148 TYRRMKDALIQLSKGVQNGPAAGLIPV-LFGEQKPTV-----LKKDIAFKPFNSNLDHSQ 201
+Y RM++AL + + V +G + + G++ P V L K I F P + L+ SQ
Sbjct: 355 SYIRMQEALRKFA--VTKKSLSGFLYYKILGQEVPDVEFDVELPKSI-FVPHFTELNQSQ 411
Query: 202 KDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERL 260
+A+ L + + ++ GPPGTGKT T I+ K ++L CA SN+AVD++ +L
Sbjct: 412 SNAVKHVLQ-RPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCAPSNVAVDHLAAKL 470
Query: 261 VPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNT 320
+++VRL +R + +ES++ L +L S + L + + +
Sbjct: 471 HSMGLKVVRLTAKSR---EDVESSVSELALH----NLVSRSAEGKLKKLLNLKEKTGELS 523
Query: 321 RREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQ 380
+ K ++ + K E +I+ ADV+ T GA ++LD F V+IDE+ Q
Sbjct: 524 SSDTTKFVKLVRKSE--------ATIIQKADVICCTCVGAGDKRLD-YKFRTVLIDESTQ 574
Query: 381 ALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSML 439
A E C I ++KG++ +L GDH QL P + +A GL ++LFERL L + L
Sbjct: 575 ASEPECLIPIVKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISL--GHIPIRL 632
Query: 440 TVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT--SSTEP----TLLLIDIAGCDMEEKK 493
VQYRM+ + + S Y ++ + +RT ST P T+ ++ A EE
Sbjct: 633 EVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMFWANYGREEIS 692
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKILRSKDDKLK 549
S +N EA RL + GV IG+ITPY Q V +++ S + L
Sbjct: 693 GNGTSYLNRIEAMNCEKIITRLFKDGVKPEQIGVITPYEGQRAYVVQYMQMNGSMEKSLY 752
Query: 550 -NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTET 608
+EV++VD FQGREK+ II+S VR+N + +GFLSD RR+NVA+TRA+ ++ +
Sbjct: 753 MGVEVASVDAFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLIILGNPRA 812
Query: 609 VSSDGFLKRLIEYFEEHAEYLSG 631
+S + L+ +F E + G
Sbjct: 813 LSRNSLWSHLLLHFREKGCLVEG 835
>gi|407035278|gb|EKE37635.1| tRNA splicing endonuclease, putative [Entamoeba nuttalli P19]
Length = 1159
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 181/559 (32%), Positives = 268/559 (47%), Gaps = 127/559 (22%)
Query: 166 GPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGK 225
P+ G+ FG+ T+ + +I FNS SQ + I+ ALS K ++ GPPGTGK
Sbjct: 267 SPSNGI----FGKYLQTMKETNI----FNS----SQIECINSALSKKGFSLIQGPPGTGK 314
Query: 226 TTTVVEIILQEV--------KRG------SKILACAASNIAVDNIVERLV---------- 261
T T++ I+ + K+G SKIL CA SN AVD IV R+
Sbjct: 315 TKTLLGILGAIIFGKPASFNKQGTIKMKHSKILVCAPSNAAVDEIVLRIQNEGILNGNGK 374
Query: 262 PHRVRLVRLGHPARLLPQVLESALDAQV-----LRGDN--------SSLASDIRKEMKAL 308
+V ++R+G+ A + +V E +D + RG N SS + I ++M+AL
Sbjct: 375 KQKVNIIRIGNYAGINSKVNEVLIDTLISNELIKRGYNEQKRTENVSSKIASIEQKMRAL 434
Query: 309 NGKL-----------------LKTKDKNTRREIQKELRTLSKEERKRQQLAVT------- 344
++ K DK R I K +TL + KR VT
Sbjct: 435 TKEIEDTTIALNNEKEKVVSSTKENDKKINR-IHKYTQTLKEMNNKRDAFRVTLQQMKSE 493
Query: 345 -----------------DVIKNADVVLTTLT--------GAVSRKLDNTSFDLVIIDEAA 379
+ + AD++ TL + K++N VIIDEAA
Sbjct: 494 KGKIQRDFAKIRKEITKQLFEEADILCCTLNTSGSDIFLNCIKEKIEN-----VIIDEAA 548
Query: 380 QALEIACWIALLKGS-RCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT-S 437
Q++EI+ I L G+ RCIL GD QLP TV SV A+ G R+LFERL Y V+
Sbjct: 549 QSVEISTLIPLRFGAERCILIGDPQQLPATVISVAAQNSGYDRSLFERL---YKCGVSVD 605
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKI------KAHPSGVKRTSSTEPTLLLIDIAGCDMEE 491
ML +QYRMH I + S Q Y+ ++ P + + ++ D G +EE
Sbjct: 606 MLKIQYRMHPLIREFPSNQFYSGELIDGRDESILPCSIDKGFGP---VVFYDACG-GLEE 661
Query: 492 KKDEEDSTMNEGEAEVAMAHAKRLIQS--GVHASDIGIITPYAAQVVLLKILRSKDDKLK 549
+ + + NE E ++ + + LI+ DIGI+TPY Q++L+K+ LK
Sbjct: 662 RVGQ--TLANEVEVQIVIGLLEGLIKKYPNCKEWDIGIVTPYRQQLLLIKMAIETSLLLK 719
Query: 550 NME---VSTVDGFQGREKEAIIISMVRSNS-KKEVGFLSDRRRMNVAVTRARRQCCLVCD 605
M V+T+DGFQGRE + II S VRS+ K +GFLSD RRMNVA+TRA+ ++ +
Sbjct: 720 EMSKLCVNTIDGFQGREMDIIIFSCVRSSQIKPSIGFLSDIRRMNVALTRAKNALWVIGN 779
Query: 606 TETVSSDGFLKRLIEYFEE 624
+ T+ ++ K+ IE+ +E
Sbjct: 780 SNTLCTNKTWKQYIEWLKE 798
>gi|363753828|ref|XP_003647130.1| hypothetical protein Ecym_5575 [Eremothecium cymbalariae DBVPG#7215]
gi|356890766|gb|AET40313.1| hypothetical protein Ecym_5575 [Eremothecium cymbalariae DBVPG#7215]
Length = 1497
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 157/465 (33%), Positives = 232/465 (49%), Gaps = 80/465 (17%)
Query: 185 KKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKIL 244
K I++ ++ + Q AI K + K+ ++ G PGTGKTT V E+I K G +L
Sbjct: 1072 KSSISYVLDDNKFNRDQAKAIDKVMRCKDYALILGMPGTGKTTVVAELIKILTKNGKSVL 1131
Query: 245 ACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKE 304
+ ++ AVDNI+ +L+ VR++RLGH +L P+V L D K
Sbjct: 1132 LASYTHSAVDNILLKLLDAEVRMIRLGHIHKLHPKV--------------RHLVPDFDKT 1177
Query: 305 MKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRK 364
+T D QLA + + VV TT G
Sbjct: 1178 ---------ETHD----------------------QLAFS--LNEPQVVATTCLGINDPM 1204
Query: 365 LD--NTSFDLVIIDEAAQ-ALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGR 421
L+ N FD VI+DEA+Q +L IA + G + IL GDH QLPP V++ A++KGL
Sbjct: 1205 LNLRNKDFDYVILDEASQVSLPIALG-PIRFGEKFILVGDHYQLPPLVKNEIAKEKGLEE 1263
Query: 422 TLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK------------------ 463
TLF+ L + VT LT+QYRM+ IM S++ +YN K+K
Sbjct: 1264 TLFKTLCQRHPASVTE-LTIQYRMNTDIMALSNELIYNGKLKCGNDSVANQTLAIQMDIA 1322
Query: 464 --AHPSGVKRTSSTEPTLLLIDIAGC-DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGV 520
++P ++ + ++L+D DM+E D+ D+ N GEA + + LI GV
Sbjct: 1323 AISNPPWLRDVLDPQRKVVLLDYGDIPDMQEMADK-DNIRNPGEARLVKLIIEGLISLGV 1381
Query: 521 HASDIGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEV 580
DIG++T Y +Q+ LL+ ++E+ T D FQGR+KE IIISMVRSN K+
Sbjct: 1382 STLDIGVMTLYRSQLRLLRSELLPHSNNNHLEILTADQFQGRDKECIIISMVRSNDKQNA 1441
Query: 581 G-FLSDRRRMNVAVTRARRQCCLVCDTETVSS----DGFLKRLIE 620
G L + RR+NVA++RA+ + L+C T+ + GFL RL+E
Sbjct: 1442 GLLLRELRRVNVAMSRAKSKLILICSKRTICNVKEIHGFL-RLVE 1485
>gi|328709620|ref|XP_003244017.1| PREDICTED: regulator of nonsense transcripts 1-like [Acyrthosiphon
pisum]
Length = 1125
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 144/447 (32%), Positives = 223/447 (49%), Gaps = 42/447 (9%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVD 254
+L+ SQ A+ A+ + + ++ GPPGTGKT T I+ Q VK G +L CA SNIAVD
Sbjct: 449 DLNRSQVYAVKHAVQ-RPLSLIQGPPGTGKTVTSATIVYQLVKINGGPVLVCAPSNIAVD 507
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLK 314
+ E++ +++VR+ +R + ++S + L ++ ++ + K +
Sbjct: 508 QLTEKIHRTGLKVVRVCAKSR---EAIDSPVSFLALHNQVRKMSCNVELQ------KFQQ 558
Query: 315 TKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVI 374
KD+ + E K R ++ A +++K ADV+ TT GA +L F ++
Sbjct: 559 LKDETGELSMADE-----KRYRALKKAAERELLKAADVICTTCVGAGDPRLVRFKFHSIL 613
Query: 375 IDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGD 433
IDE+ QA E C + ++ G + IL GDH QL P V +A + GL ++LFERL L
Sbjct: 614 IDESMQATEPECMVPVVLGVKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIR 673
Query: 434 EVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGV----KRTSSTE--------PTLLL 481
L VQYRMH + + S Y ++ +GV ++ S E P L
Sbjct: 674 PFR--LEVQYRMHPELSRFPSNFFYEGSLQ---NGVCADDRKLSKIEFPWPVADKPMLFY 728
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKIL 541
+ EE S +N EA A R ++ GV IGIITPY Q L
Sbjct: 729 VTQG---QEEIAGSGTSYLNRTEAANVEKIATRFLRCGVKPDQIGIITPYEGQRAYLVQY 785
Query: 542 RSKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
L + +E+++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRA
Sbjct: 786 MQYQAPLPAKVYQEIEIASVDAFQGREKDLIIMSCVRSNEHQGIGFLNDPRRLNVALTRA 845
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFE 623
+ +V + + +S L+ Y++
Sbjct: 846 KYGILIVGNPKVLSKQQLWNHLLNYYK 872
>gi|448678425|ref|ZP_21689432.1| DNA-binding protein-like protein [Haloarcula argentinensis DSM
12282]
gi|445772412|gb|EMA23457.1| DNA-binding protein-like protein [Haloarcula argentinensis DSM
12282]
Length = 741
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 159/506 (31%), Positives = 239/506 (47%), Gaps = 68/506 (13%)
Query: 140 LEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDH 199
L L N V + R ++A+ L+ AG P+ F + F+ L+
Sbjct: 288 LTALLNPVPFDREREAIESLTDHRFRDVLAGDRPITFSNGAAARSDQ------FDEELNQ 341
Query: 200 SQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVER 259
Q+ A+ AL + ++F +HGPPGTGKT T+VEI+ + + G +L CA SN AVDN
Sbjct: 342 EQQLAVEHALLADDLFCIHGPPGTGKTRTLVEIVRRAAQAGEDVLVCADSNQAVDN---- 397
Query: 260 LVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKN 319
LV R PQ +L A GD + A NG + +
Sbjct: 398 LVAGSSRSDEAD------PQ----SLHAYGQHGDGDYTLDRVNASQSA-NGVVRR----- 441
Query: 320 TRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAA 379
A +DV ADVV T A + + FDLV++DEA
Sbjct: 442 ----------------------AYSDVPGRADVVAVTNNSAATLARE---FDLVVLDEAT 476
Query: 380 QALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG--DEVTS 437
Q+ A I L++ R +LAGDH QLPP S E + G +LFE L G D V
Sbjct: 477 QSTCAASCIPLVRADRAVLAGDHRQLPPYSASDEPPESSYGHSLFEHLYADGGVYDGVGL 536
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDE-E 496
L QYRMH +I + +++ Y+ + + + +P I G ++ + +
Sbjct: 537 QLQTQYRMHRNIAYFPNRRFYDRTL-------RNGRAVDPLPDRPAIEGYNVGGRVETVG 589
Query: 497 DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK-ILRSKDDKLKNMEVST 555
S N EA + +AH + + + V A +IG+ITPY+AQV ++ L + D + V T
Sbjct: 590 HSKANPTEARL-VAHLVQDLLADVPAEEIGVITPYSAQVSRIRETLAKRTDAGDRVTVDT 648
Query: 556 VDGFQGREKEAIIISMVRSNSKKEVGFLS----DRRRMNVAVTRARRQCCLVCDTETVSS 611
+D FQG E+ AI++S+VRSN+ VGFL RR+NVA+TRA+R C +V D T+
Sbjct: 649 IDSFQGGERTAIVLSLVRSNAAGNVGFLGRPVDGPRRLNVALTRAKRYCAIVADWHTLRY 708
Query: 612 DGFLKRLIEYFEEHAEYLSGSEYLNE 637
D K + + + +++S ++ LN
Sbjct: 709 DADGK-CTDLYSDFYQFVSNTDRLNH 733
>gi|1575536|gb|AAC50771.1| regulator of nonsense transcript stability [Homo sapiens]
Length = 1118
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 226/451 (50%), Gaps = 34/451 (7%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSKILACAASNIAVD 254
+L+HSQ A+ K + + + ++ GPPGTGKT T I+ ++ +L CA SNIAVD
Sbjct: 470 DLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQDNGPVLVCAPSNIAVD 528
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 529 QLTEKIHQTGLKVVRLCPKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 577
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 578 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 632
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 633 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 692
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 693 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 750
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 751 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 810
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 811 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGV 870
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ +++E + G
Sbjct: 871 IIVGNPKALSKQPLWNHLLIFYKEQKVLVEG 901
>gi|391341257|ref|XP_003744947.1| PREDICTED: regulator of nonsense transcripts 1-like [Metaseiulus
occidentalis]
Length = 1137
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 145/452 (32%), Positives = 228/452 (50%), Gaps = 33/452 (7%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ A+ AL + + ++ GPPGTGKT T I+ Q K+G +L CA SNIAVD
Sbjct: 440 LNRSQVYAVRHALQ-RPLSLIQGPPGTGKTVTSATIVYQLAKQGHGPVLVCAPSNIAVDQ 498
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ R+++VRL +R + + S + L ++ + + + L KL +
Sbjct: 499 LTEKIHRTRLKVVRLCAKSR---EAINSPVSFLALHNQVRNMEVNASQHISELK-KLQQL 554
Query: 316 KDKNTRREIQKELRTLSKEERKR----QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
KD E LS + KR ++L ++++ ADV+ T GA ++ F
Sbjct: 555 KD---------ETGELSSADEKRYRILKRLCERELLEAADVICCTCVGAGDPRILRFKFH 605
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
++IDE QA E C + ++ G++ IL GDH QL P V A + GL ++LFERL L
Sbjct: 606 SILIDECMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKGAARAGLSQSLFERLVVL 665
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT------SSTEPTLLLIDI 484
+ L VQYRMH + + S Y ++ +R +P +
Sbjct: 666 GIRPLR--LEVQYRMHPSLSEFPSNFFYEGSLQNGVYAEERRLKGVDFPFPQPDKPMFFY 723
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKI 540
EE S +N EA + R ++S V IG+ITPY Q V ++
Sbjct: 724 CCNGQEEIAASGTSYLNRTEAALVEKIVTRFLKSSVKPEQIGVITPYEGQRAFLVQYMQY 783
Query: 541 LRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 599
S KL +++EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 784 SGSLHSKLYQDIEVASVDAFQGREKDLIIMSCVRSNEHQGIGFLNDPRRLNVALTRARYG 843
Query: 600 CCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ +++ ++ + G
Sbjct: 844 IIIVGNPKVLSKQPLWNHLLAFYKNNSVVVEG 875
>gi|378756061|gb|EHY66086.1| hypothetical protein NERG_00782 [Nematocida sp. 1 ERTm2]
Length = 1370
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 160/472 (33%), Positives = 239/472 (50%), Gaps = 67/472 (14%)
Query: 193 FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIA 252
F L+ SQ+ A+S AL KN+ ++ GPPGTGKT TV +I + + ++L CA SN A
Sbjct: 920 FYDQLNKSQQVAVSTALK-KNITLIQGPPGTGKTKTVSSMIAYFLLQNCRVLVCAPSNAA 978
Query: 253 VDNIVE-----RLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKA 307
VD +VE + +P + +R+ ++ + +A V +G+ L +++
Sbjct: 979 VDMLVESGSIWKTIPD-CKWIRISISGN---RICDEGDEAVVNKGE---LMENLQNSPSL 1031
Query: 308 LNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVT---------------------DV 346
+ ++T N + + +L+T E + V+ D
Sbjct: 1032 VQSINVQTTPNNYSTDPKNKLKTEKTRESEHTSPNVSYTSTANDKFASVREPSRKENKDE 1091
Query: 347 IKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKG-SRCILAGDHLQL 405
I A +V TL+ A S + + FD++IIDEA QA E + I L +R IL GD +QL
Sbjct: 1092 INRAQLVFCTLSMAGSSVFNQSPFDVLIIDEACQATEPSTLIPLRTAPTRIILVGDPMQL 1151
Query: 406 PPTVQSVEAEKKGLGRTLFERLADLYGDEVTS-MLTVQYRMHEHIMNWSSKQLYNSKIKA 464
PPT+ S + K L TLFERL++ +T +L QYRM+ I ++S Q Y ++++
Sbjct: 1152 PPTIIS---QSKDLSVTLFERLSE----SITPILLDTQYRMNSIISKFASMQFYENRLR- 1203
Query: 465 HPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD 524
GV S E ID +G + E KD N E V + + A D
Sbjct: 1204 --DGVSLES--ELPFAFIDASGTEETEGKD----IFNRKEINVILQFSSM----AAKAYD 1251
Query: 525 -IGIITPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFL 583
+GII+PY QV LK + +K M++STVDGFQG+EK+ IIIS VRS K++GFL
Sbjct: 1252 TVGIISPYKGQVGQLKKV------IKGMDISTVDGFQGQEKDCIIISTVRS---KKIGFL 1302
Query: 584 SDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE-HAEYLSGSEY 634
+D RRMNVA+TRAR +V + D K LI+Y +E + Y +G Y
Sbjct: 1303 NDIRRMNVALTRARYTVIIVGSMSLLQQDPTWKSLIKYVQENNFVYKAGEVY 1354
>gi|440295047|gb|ELP87976.1| nonsense-mediated mRNA decay protein, putative [Entamoeba invadens
IP1]
Length = 943
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 178/684 (26%), Positives = 301/684 (44%), Gaps = 90/684 (13%)
Query: 17 EFVSVMAPLIDLEKEAE---------ISASITSGASRNLDTAQKKGSTILNLKCVDAQTG 67
++ + PLI LE A+ ++ + R D +K + +
Sbjct: 184 QYQNTFTPLIKLEANADKNKRESEHLVNIDLKFDDVRKADEMKKTVHATFEVPANEEIRI 243
Query: 68 LMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQ---GVVYRLKDSSITV 124
+ TL+ F KG + ++ T++ +V P++ D L G V ++ ITV
Sbjct: 244 TINDTLMFFLPLKGKSVEVNEIHTYNEMV--PDEKDKFFSRLHTLLVGTVQYIRGKDITV 301
Query: 125 AFDDIPE---------------------EGLNSPLRLEKLANEVT--------YRRMKDA 155
F+ P + ++ P + +K A ++ + M
Sbjct: 302 QFEKTPGVPIEKQIITQQHNAMKFSICFQWMSIPFKRKKTALQMFGESEEPHDFPTMSSY 361
Query: 156 LIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNS----NLDHSQKDAISKALSS 211
L G+ P + F ++K L + + N+ L+ Q + + K+ +
Sbjct: 362 LRNRLLGMPKNPMDMVYEKDFKDEKEAYLAQHPTLQSMNAPNLPTLNQVQYEVVMKSFT- 420
Query: 212 KNVFMLHGPPGTGKTTTVVEIILQEVKR--GSKILACAASNIAVDNIVERLVPHRVRLVR 269
+++ ++ GPPGTGKT T II V G K+L CA SNIAVD + ++V V+++R
Sbjct: 421 QSLSLIQGPPGTGKTVTSATIIYHAVHSNPGKKVLVCAPSNIAVDQLAAKIVDTGVKVIR 480
Query: 270 LGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNT---RREIQK 326
+ R +N L K ++ + + KDK T + ++
Sbjct: 481 VFGKGR---------------ESENEPLYD--YSLGKIVDDVMAQMKDKETLEKYKAFRE 523
Query: 327 ELRTLSKEERKRQQLAVTD----VIKNADVVLTTLTGAVSRKLD--NTSFDLVIIDEAAQ 380
E L++ ++ + D V + DV+ T A R+L N D V++DE+ Q
Sbjct: 524 EPEELAEADKNSILAVIRDIELKVFRECDVICCTCCVAGDRRLFGINNQIDTVLVDESTQ 583
Query: 381 ALEIACWIALLKGSRCI-LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSML 439
A E + + R I L GDH QL P + S +A K GLG +F RL L G E L
Sbjct: 584 AEEPEVLVCFMNSVRQIFLVGDHCQLGPVLNSKDARKYGLGLPMFSRLLQL-GHE-PYRL 641
Query: 440 TVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLID------IAGCDMEEKK 493
QYRMH + +SS Y+ ++ + ++R ++ + +A E
Sbjct: 642 QFQYRMHPALSEFSSHTFYDGVLQNGVTALERQFNSLKRFWFVQNRPMMFVATAGKESFG 701
Query: 494 DEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKL----- 548
S +N+ E V ++I GV IG+ITPY AQ +++ +KD +L
Sbjct: 702 STATSYLNDEEVTVIRDIIVKMIDCGVSPEQIGVITPYIAQKQAIRVRLTKDTELGVNVM 761
Query: 549 KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTET 608
+E+++VD FQGREK+ II S VRSNS E+GFL + +R+NV++TRA+ +V + T
Sbjct: 762 NAIEIASVDSFQGREKDFIIFSTVRSNSTNEIGFLKNPQRLNVSITRAKYGLVVVGNPST 821
Query: 609 VSSDGFLKRLIEYFEEHAEYLSGS 632
+SSD +++F +H + G+
Sbjct: 822 LSSDPLWSLYLQFFIDHNVLVHGN 845
>gi|366987891|ref|XP_003673712.1| hypothetical protein NCAS_0A07730 [Naumovozyma castellii CBS 4309]
gi|342299575|emb|CCC67331.1| hypothetical protein NCAS_0A07730 [Naumovozyma castellii CBS 4309]
Length = 992
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 167/557 (29%), Positives = 272/557 (48%), Gaps = 65/557 (11%)
Query: 110 GQGVVYRLKDSSITVAFDDI-----------PEEGLNSPLRLEKLANEVTYRRMKDALIQ 158
G+G + RL +S F D P L + E + +Y RM+D+L +
Sbjct: 323 GRGYIVRLPNS-----FQDTFTLELKPSKVPPPTNLTTGFTAEFIWKGTSYDRMQDSLKK 377
Query: 159 LSKGVQNGPAAGLIPV-LFGEQKPTVLKKDIAFK---------PFNSNLDHSQKDAISKA 208
+ + +G + + G Q DI F P + L+ SQ +A+
Sbjct: 378 FA--IDKKSISGYLYYKILGHQV-----VDITFDVPMPKQFSIPHFTQLNDSQSNAVQHV 430
Query: 209 LSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRL 267
L + + ++ GPPGTGKT T I+ K ++L CA SN+AVD++ +L +++
Sbjct: 431 LQ-RPLSLIQGPPGTGKTVTSATIVYHLSKIHKERVLVCAPSNVAVDHLAAKLRDLGLKV 489
Query: 268 VRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKE 327
VRL +R + +ES++ N +L + + + K KLL K+ E+ +
Sbjct: 490 VRLTAKSR---EDVESSVS-------NLALHNLVARSSKGELRKLLTLKE-----EVGEL 534
Query: 328 LRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACW 387
+ +K+ K + +++ ADVV T GA ++LD T F V+IDE+ QA E C
Sbjct: 535 SASDTKKFVKLVRRTEAEILAKADVVCCTCVGAGDKRLD-TKFRTVLIDESTQATEPECL 593
Query: 388 IALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMH 446
I ++KG++ IL GDH QL P + +A GL ++LFERL L + L VQYRM+
Sbjct: 594 IPIIKGAKQVILVGDHQQLGPVILERKAGDAGLKQSLFERLISL--GHIPIRLEVQYRMN 651
Query: 447 EHIMNWSSKQLYNSKIKAHPSGVKRT--SSTEPTLL----LIDIAGCDMEEKKDEEDSTM 500
++ + S Y ++ + +RT +ST P + ++ A EE S +
Sbjct: 652 PYLSEFPSNMFYEGSLQNGVTIEQRTVPNSTFPWPIHDVPMMFWANYGREELSSNGTSYL 711
Query: 501 NEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILRSKDDKLKNM----EVST 555
N EA +L + GV IG+ITPY Q +L+ ++ K M EV++
Sbjct: 712 NRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKEMYVKVEVAS 771
Query: 556 VDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFL 615
VD FQGREK+ II+S VR+N ++ +GFL D RR+NV +TRA+ ++ + ++S +
Sbjct: 772 VDAFQGREKDYIILSCVRANDQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLSKNILW 831
Query: 616 KRLIEYFEEHAEYLSGS 632
L+ +F E + G+
Sbjct: 832 NHLLLHFREKGCLVEGT 848
>gi|308810357|ref|XP_003082487.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
gi|116060956|emb|CAL56344.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
Length = 1079
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 144/437 (32%), Positives = 214/437 (48%), Gaps = 63/437 (14%)
Query: 194 NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII--LQEVKRGSKILACAASNI 251
N L+ SQ+DA+ AL + + ++ GPPGTGKT T V I+ + E+ G +L + SN
Sbjct: 629 NHGLNASQRDAMKAALE-RRLTLIQGPPGTGKTHTSVAIVRGMLEIGHGP-VLCTSDSNT 686
Query: 252 AVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGK 311
AVDN+VE L V ++RLG P + P + ++ + G
Sbjct: 687 AVDNMVEGLAKAGVNVIRLGRPEAVRPDLARYQIENAIPPG------------------- 727
Query: 312 LLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+K E QL ++ A + T +GA S LD +F
Sbjct: 728 -------------------ATKHEAYEAQL---RAVRYAQAICATCSGAGSDFLDRINFS 765
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V++DEA+Q E + L G + +L GDH QLPPTV S EAE G+ +LF+RL
Sbjct: 766 AVMLDEASQVTEPMSLVPLANGCQQLVLVGDHKQLPPTVVSREAELAGMTLSLFDRLT-- 823
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST--EPTLLLIDIAGCD 488
+L Q+RMH I ++ S YN +K+ R + + + + IA C
Sbjct: 824 RAGVKPYLLDTQFRMHPAISHFPSHSFYNGLVKSGTPAKDRPAPKGFQWPIPSVPIAFCP 883
Query: 489 MEEKKDEEDSTM---NEGEAEVAMAHAKRLIQSG-VHASDIGIITPYAAQVVLLK-ILRS 543
E E + + N EAE + ++ +G + +GI+TPYAAQV L++ +LR
Sbjct: 884 TPENSKETNDNLSYSNRVEAERVLEILLGVLSAGELRPCHVGIVTPYAAQVKLIRSMLRQ 943
Query: 544 K--------DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
+ D +EVS+VDG+QGREKE +I+S VR+N +GF++D RR NV +TR
Sbjct: 944 RGVRTGVDRDTGEAGIEVSSVDGYQGREKELMIVSTVRANDLNTIGFVADARRCNVTLTR 1003
Query: 596 ARRQCCLVCDTETVSSD 612
ARR +V T+S D
Sbjct: 1004 ARRGVIVVGHASTLSKD 1020
>gi|393911179|gb|EFO25239.2| nonsense mRNA reducing factor 1 NORF1 [Loa loa]
Length = 1059
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 157/476 (32%), Positives = 237/476 (49%), Gaps = 57/476 (11%)
Query: 187 DIAFK---------PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV 237
DI FK P L+HSQ A+ K + + + ++ GPPGTGKT T I+ V
Sbjct: 416 DIIFKVSLPKRFSVPGLPELNHSQVHAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLV 474
Query: 238 KR-GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSS 296
K+ ++L CA SNIAVD + E++ +++VRL +R LD+ V +
Sbjct: 475 KQTNGQVLVCAPSNIAVDQLAEKIHRTGLKVVRLCAKSR-------ETLDSPV-----AF 522
Query: 297 LASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAV---TDVIKNADVV 353
LA + ++KAL+G K + + EI + +ER+ + L + ++ ADV+
Sbjct: 523 LA--LHNQLKALHGAAELHKLQQLKEEIGE---LADADERRFRALRIAKECQLLAAADVI 577
Query: 354 LTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSV 412
T A +L + V+IDE+ QA E +A++ G R +L GDH QL P +
Sbjct: 578 CCTCVSAADSRLSHMRIKCVLIDESTQATEPEVMVAVVCGVRQLVLVGDHCQLGPVIMCK 637
Query: 413 EAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT 472
+A K GL ++LFERL L G+ L VQYRMH + ++ S Y ++ +GV
Sbjct: 638 KAAKAGLSQSLFERLV-LLGNRPIR-LQVQYRMHPALSSFPSNVFYEGSLQ---NGV--- 689
Query: 473 SSTEPTLLLID-----------IAGC-DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGV 520
+ E L+ ID C EE S +N EA A R +++G+
Sbjct: 690 TEGERQLIGIDWQWPVPDKPMMFWSCYGQEELSSSGTSFLNRTEAANVEKLATRFLKAGI 749
Query: 521 HASDIGIITPYAAQ----VVLLKILRSKDDKLK-NMEVSTVDGFQGREKEAIIISMVRSN 575
IGIITPY Q V ++ + KL MEV+ VD FQGREK+ II++ VRSN
Sbjct: 750 KPEQIGIITPYEGQRSYIVQFMQTQGALHSKLYLEMEVANVDAFQGREKDIIIVTCVRSN 809
Query: 576 SKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+ +GFL+D RR+NVA+TRA+ +V + + +S L+ F+E + G
Sbjct: 810 DHQGIGFLNDSRRLNVALTRAKFGLIIVGNAKVLSRHPLWNYLLSVFKEKGCLVEG 865
>gi|195131883|ref|XP_002010374.1| GI14718 [Drosophila mojavensis]
gi|193908824|gb|EDW07691.1| GI14718 [Drosophila mojavensis]
Length = 1187
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 149/485 (30%), Positives = 241/485 (49%), Gaps = 34/485 (7%)
Query: 160 SKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHG 219
S+ + +G A G VLF +P + P +L+ SQ A+ AL + + ++ G
Sbjct: 427 SRLLGHGRADGSDEVLFRGPQPKLYSA-----PHLPDLNRSQVYAVKHALQ-RPLSLIQG 480
Query: 220 PPGTGKTTTVVEIILQEVKR-GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLP 278
PPGTGKT T I+ Q VK+ G +L CA SN AVD + E++ +++VR+ +R
Sbjct: 481 PPGTGKTVTSATIVYQLVKQHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSR--- 537
Query: 279 QVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKR 338
+ ++S + L ++ ++ E+K KL + KD+ E R S +
Sbjct: 538 EAIDSPVSFLALHNQIRNMETN--SELK----KLQQLKDETGELSSADEKRYRSLKRGAE 591
Query: 339 QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CI 397
QL ++ ADV+ T GA +L F ++IDE+ Q+ E C + ++ G++ I
Sbjct: 592 NQL-----LEAADVICCTCVGAGDMRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLI 646
Query: 398 LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQL 457
L GDH QL P V +A + GL ++LFERL L L VQYRMH + + S
Sbjct: 647 LVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR--LEVQYRMHPELSQFPSNFF 704
Query: 458 YNSKIKAHPSGVKRT-----SSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHA 512
Y ++ R +P + + EE S +N EA
Sbjct: 705 YEGSLQNGVCAEDRRLKLDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKIT 764
Query: 513 KRLIQSGVHASDIGIITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAI 567
R +++G+ IGIITPY Q V ++ S +L + +E+++VD FQGREK+ I
Sbjct: 765 TRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDII 824
Query: 568 IISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAE 627
I+S VRSN ++ +GFL+D RR+NVA+TRA+ +V + + ++ L+ ++++
Sbjct: 825 IMSCVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLLNFYKDRKV 884
Query: 628 YLSGS 632
+ GS
Sbjct: 885 LVEGS 889
>gi|50286349|ref|XP_445603.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524908|emb|CAG58514.1| unnamed protein product [Candida glabrata]
Length = 964
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 168/551 (30%), Positives = 269/551 (48%), Gaps = 55/551 (9%)
Query: 110 GQGVVYRLKDSSITVAFDDI-----------PEEGLNSPLRLEKLANEVTYRRMKDALIQ 158
G G + RL +S F D+ P L + E + +Y RM+ AL
Sbjct: 312 GTGFIVRLPNS-----FKDMFTLELRPSKTPPPTHLTTGFTAEFIWKATSYDRMQTALKN 366
Query: 159 LSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK-----PFNSNLDHSQKDAISKALSSKN 213
+ V +G + + L D+ P + L+ SQ A+ L +
Sbjct: 367 FA--VDKKSISGYLYYKILGHQVVDLHFDVPMPKELSLPGYTKLNASQSKAVEHVLQ-RP 423
Query: 214 VFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLGH 272
+ ++ GPPGTGKT T I+ K R +IL CA SNIAVD++ +L +++VR+
Sbjct: 424 LSLIQGPPGTGKTVTSASIVYHLSKIRKDRILVCAPSNIAVDHLAAKLRDLGLKVVRVTA 483
Query: 273 PARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLS 332
+R + +ES++ + L + A + K++ L + + ++T+R I +L
Sbjct: 484 KSR---EDVESSVSSLALHNLVAKGAKGVLKKLLKLKEEAGELSARDTKRFI-----SLV 535
Query: 333 KEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLK 392
K+ K +++ ADVV T GA R+LD F V+IDE+ QA E C I ++K
Sbjct: 536 KKTEK-------SILEQADVVCCTCVGAGDRRLD-MKFRTVLIDESTQASEPECLIPIVK 587
Query: 393 GSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMN 451
G++ IL GDH QL P + +A GL ++LFERL L + L VQYRM+ +
Sbjct: 588 GAKQVILVGDHQQLGPVILERKASDAGLKQSLFERLISL--GHIPIRLEVQYRMNPFLSE 645
Query: 452 WSSKQLYNSKIKAHPSGVKRT--SSTEPTLL----LIDIAGCDMEEKKDEEDSTMNEGEA 505
+ S Y ++ + +RT +ST P + ++ A EE S +N EA
Sbjct: 646 FPSNMFYEGSLQNGVTEEQRTLANSTFPWPINGIPMMFWANYGSEEMSANGTSYLNRTEA 705
Query: 506 EVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILRSK---DDKL-KNMEVSTVDGFQ 560
RL + GV IG+ITPY Q +L+ ++ D +L N+EV++VD FQ
Sbjct: 706 MNCERIITRLFRDGVKPEQIGVITPYEGQRAYVLQYMQMNGALDKELYSNVEVASVDAFQ 765
Query: 561 GREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
GREK+ II+S VR+N ++ +GFL D RR+NV +TRA+ ++ + ++S + L+
Sbjct: 766 GREKDFIILSCVRANEQQMIGFLRDPRRLNVGLTRAKYGLIILGNPRSLSRNTLWNHLLL 825
Query: 621 YFEEHAEYLSG 631
+F + + G
Sbjct: 826 HFRQKGCLVEG 836
>gi|412986744|emb|CCO15170.1| ATP-dependent helicase NAM7 [Bathycoccus prasinos]
Length = 974
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 145/438 (33%), Positives = 216/438 (49%), Gaps = 68/438 (15%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII--LQEVKRGSKILACAASNIAV 253
NL+ SQ+ A+S L + + ++ GPPGTGKT T V I+ L ++ RG +L + SN AV
Sbjct: 538 NLNESQQRAVSATLE-RRLSLIQGPPGTGKTHTSVAIVRGLIDIGRGP-VLCTSDSNTAV 595
Query: 254 DNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL 313
DN+VE L VR+VR+G + + ++ V G
Sbjct: 596 DNLVEGLARAGVRVVRIGRTEAVRQDLAMYQIENMVPPG--------------------- 634
Query: 314 KTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLV 373
+K E Q+ ++ A V T G+ S LD SF V
Sbjct: 635 -----------------CTKHEAYEAQI---RAVRYAQAVCCTCAGSGSDFLDRISFSAV 674
Query: 374 IIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG 432
++DEA+Q E + + +G + +L GDH QLPPT+ S EAE GL ++F+RL L
Sbjct: 675 MLDEASQVTEPMSLVPISRGCQQLVLVGDHKQLPPTILSREAELGGLTLSMFDRLVSL-- 732
Query: 433 DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK--------AHPSGVKRTSSTEPTLLLIDI 484
V ML Q+RMH + + S Y+ ++K P G P +
Sbjct: 733 GVVPYMLDTQFRMHPALGKFPSDAFYDKQLKNGTPRAMRPTPIGFNWPQPNVPICYIPTH 792
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG-VHASDIGIITPYAAQVVLLK--IL 541
ME ++ +S N EAE+ +A+ + + + + DIGI+TPYAAQV LL+ I
Sbjct: 793 PTNAME--NNDSNSYSNRAEAELVLAYLRGFLSAQELRPKDIGIVTPYAAQVRLLRQMIR 850
Query: 542 RS-------KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
R+ ++ +EVS+VDGFQGREKE +I+S VR+N+ + +GF+SD RR NV +T
Sbjct: 851 RAGIQTGVDRNTGECGIEVSSVDGFQGREKELMIVSTVRANTNRSLGFVSDPRRCNVTLT 910
Query: 595 RARRQCCLVCDTETVSSD 612
RARR ++ T+ D
Sbjct: 911 RARRGLVVIGHENTLRCD 928
>gi|365763806|gb|EHN05332.1| Nam7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 971
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 171/561 (30%), Positives = 273/561 (48%), Gaps = 73/561 (13%)
Query: 110 GQGVVYRLKDSSITVAFDDI-----------PEEGLNSPLRLEKLANEVTYRRMKDALIQ 158
G+G + RL +S F D P L + E + +Y RM+DAL +
Sbjct: 313 GRGYIVRLPNS-----FQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKK 367
Query: 159 LSKGVQNGPAAGLIPV-LFGEQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSK 212
+ + +G + + G Q + L K+ + F + L+ SQ +A+S L +
Sbjct: 368 FA--IDKKSISGYLYYKILGHQVVDISFDVPLPKEFSIPNF-AQLNSSQSNAVSHVLQ-R 423
Query: 213 NVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLG 271
+ ++ GPPGTGKT T I+ K +IL CA SN+AVD++ +L +++VRL
Sbjct: 424 PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLT 483
Query: 272 HPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTL 331
+R + +ES++ N +L + + + K LLK KD E+ L
Sbjct: 484 AKSR---EDVESSVS-------NLALHNLVGRGAKGELKNLLKLKD---------EVGEL 524
Query: 332 SKEERKRQQLAV----TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACW 387
S + KR V +++ ADVV T GA ++LD T F V+IDE+ QA C
Sbjct: 525 SASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRLD-TKFRTVLIDESTQASGPECL 583
Query: 388 IALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMH 446
I ++KG++ IL GDH QL P + +A GL ++LFE+L L V L VQYRM+
Sbjct: 584 IPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFEKLISL--GHVPIRLEVQYRMN 641
Query: 447 EHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT---------LLLIDIAGCDMEEKKDEED 497
++ + S Y ++ +GV T P + ++ A EE
Sbjct: 642 PYLSEFPSNMFYEGSLQ---NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGT 698
Query: 498 STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILR-----SKDDKLKNM 551
S +N EA +L + GV IG+ITPY Q +L+ ++ KD +K +
Sbjct: 699 SFLNRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIK-V 757
Query: 552 EVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
EV++VD FQGREK+ II+S VR+N ++ +GFL D RR+NV +TRA+ ++ + +++
Sbjct: 758 EVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLAR 817
Query: 612 DGFLKRLIEYFEEHAEYLSGS 632
+ L+ +F E + G+
Sbjct: 818 NTLWNHLLIHFREKGCLVEGT 838
>gi|156836785|ref|XP_001642437.1| hypothetical protein Kpol_337p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112963|gb|EDO14579.1| hypothetical protein Kpol_337p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 999
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 174/553 (31%), Positives = 272/553 (49%), Gaps = 59/553 (10%)
Query: 110 GQGVVYRLKDS-----SITVAFDDIPEEG-LNSPLRLEKLANEVTYRRMKDALIQLSKGV 163
G+G + RL +S ++ + IP L + E + +Y RM+DAL + + +
Sbjct: 330 GRGYIVRLPNSFKDEFTLELKPSKIPAPTQLGTGFTAEFIWKGTSYDRMQDALKKFA--I 387
Query: 164 QNGPAAGLIPV-LFGEQKPTVLKKDIAFK---------PFNSNLDHSQKDAISKALSSKN 213
+G + + G + DI F P + L+ SQ A++ L K
Sbjct: 388 DKKSISGYLYYKILGHEV-----HDIEFDVPIPTELSIPHFARLNASQASAVAHVLQ-KP 441
Query: 214 VFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLGH 272
+ ++ GPPGTGKT T I+ K +IL CA SN+AVD++ +L +++VRL
Sbjct: 442 LSLIQGPPGTGKTVTSATIVYHLSKSHKDRILVCAPSNVAVDHLASKLRDLGLKVVRLTA 501
Query: 273 PAR--LLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRT 330
+R + V + AL V R L ++ + + G+L T K R ++K
Sbjct: 502 KSREDVESSVSDLALHNLVARSSKGELKKLLKLKEEV--GELSATDAKKFVRLVRK---- 555
Query: 331 LSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIAL 390
A ++++K ADVV T GA ++LD F V+IDE+ QA E C I +
Sbjct: 556 -----------AESEILKKADVVCCTCVGAGDKRLD-AKFRTVLIDESTQASEPECLIPI 603
Query: 391 LKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHI 449
+KG++ IL GDH QL P + +A GL ++LFERL L V L VQYRM+ +
Sbjct: 604 VKGAKQIILVGDHQQLGPVILERKAGDAGLKQSLFERLILL--GHVPIRLEVQYRMNPFL 661
Query: 450 MNWSSKQLYNSKIKAHPSGVKRT--SSTEPTLL----LIDIAGCDMEEKKDEEDSTMNEG 503
+ S Y ++ + +RT ST P + ++ A EE S +N
Sbjct: 662 SEFPSNMFYEGSLQNGVTIEQRTIPGSTFPWPIHEVPMMFWANYGREEISANGTSFLNRI 721
Query: 504 EAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILR---SKDDKLK-NMEVSTVDG 558
EA RL + GV IG+ITPY Q +L+ ++ S D +L N+EV++VD
Sbjct: 722 EAMNCERIITRLFKDGVKPHQIGVITPYEGQRAYILQYMQMNGSLDKELYVNVEVASVDA 781
Query: 559 FQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRL 618
FQGREK+ II+S VR+N ++ +GFLSD RR+NV +TRA+ ++ + ++S + L
Sbjct: 782 FQGREKDYIILSCVRANEQQAIGFLSDPRRLNVGLTRAKYGLVILGNPRSLSRNVLWNHL 841
Query: 619 IEYFEEHAEYLSG 631
+ +F E + G
Sbjct: 842 LIHFREKGCLVEG 854
>gi|448521196|ref|XP_003868449.1| Sen1 helicase [Candida orthopsilosis Co 90-125]
gi|380352789|emb|CCG25545.1| Sen1 helicase [Candida orthopsilosis]
Length = 1946
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 172/525 (32%), Positives = 259/525 (49%), Gaps = 93/525 (17%)
Query: 181 PTVLK----KDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQE 236
PTV K KD+ +++ SQ AI + S+ ++ GPPGTGKT T++ I+
Sbjct: 1252 PTVPKQVDDKDVEHMHKLYDVNMSQAKAIIGSYQSEGFSLIQGPPGTGKTKTILGIVGYS 1311
Query: 237 VKRGSK------------------ILACAASNIAVDNIVERL-----------VPHRVRL 267
+ G+ IL CA SN AVD +V RL +P +++
Sbjct: 1312 LSHGTNEKVIEMPSKSSSPPSKAKILICAPSNAAVDELVVRLRNGVKNSKGEHMP--LKV 1369
Query: 268 VRLGHPARLLPQV----LESALDAQV------------LRGDNSSLASDIRKEMKALNGK 311
VRLG + P V LE +D ++ LR + + + + + LN +
Sbjct: 1370 VRLGRSDAINPAVKDLTLEELVDKELQTKQVEVVTDPNLRSELNKMTQERDRLRSRLNDE 1429
Query: 312 LLKTKDKNTRR----EIQKELRTLSK---EERKRQQLAVTD-----------VIKNADVV 353
L K+K+ + EI K+ L+K ++R+R +A + ++ A+++
Sbjct: 1430 TLDPKEKDGVQQKLLEINKQRSELTKKLDDQRERSSIAYRNKEIDRRNIQARILSEANIL 1489
Query: 354 LTTLTGAVSRKLDNTS--FDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQ 410
TL+G+ + N S FD VIIDEA Q LE A I L G + CI+ GD QLPPTV
Sbjct: 1490 CATLSGSAHDLVANLSVTFDQVIIDEACQCLESAAIIPLRYGCKKCIMVGDPNQLPPTVL 1549
Query: 411 SVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK 470
S A ++LF R+ Y D V +L QYRMH I + S + Y SK+ P G+K
Sbjct: 1550 SQSAASLNYDQSLFVRMQQNYPDSVY-LLNTQYRMHPMISKFPSAEFYQSKLIDGP-GMK 1607
Query: 471 RTSSTEPTLLL--------IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLI----QS 518
+T P L+ DI EK + S N+ EA V + ++++ QS
Sbjct: 1608 E-KNTRPWHLIDPLSPYRFFDIVS--RHEKNELTRSLFNKEEANVCLQLVQKMMTMVPQS 1664
Query: 519 GVHASDIGIITPYAAQVVLLKIL--RSKDDKLKN-MEVSTVDGFQGREKEAIIISMVRSN 575
+ A IGII+PY Q+ +K + R+ + N ++ +TVDGFQG+EKE II+S VR++
Sbjct: 1665 DI-AGKIGIISPYKEQIRTIKSVFERAYGRLIFNEIDFNTVDGFQGQEKEIIIMSCVRAS 1723
Query: 576 SKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
+ VGFLSD RRMNVA+TRA ++ + ++ D KRL+E
Sbjct: 1724 ANGNVGFLSDVRRMNVALTRACTTLWILGNKTSLERDAVWKRLLE 1768
>gi|402594446|gb|EJW88372.1| hypothetical protein WUBG_00717 [Wuchereria bancrofti]
Length = 1089
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 157/510 (30%), Positives = 255/510 (50%), Gaps = 43/510 (8%)
Query: 141 EKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFN----SN 196
E + N ++ RM+ AL L + ++ + + L G ++ K K F+
Sbjct: 376 EFVWNSTSFERMQAALSLLGQD-EDCVSQFIYHKLMGHDIDDIIFKVSLPKRFSVPGLPE 434
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSKILACAASNIAVDN 255
L+HSQ A+ L + + ++ GPPGTGKT T I+ VK+ ++L CA SNIAVD
Sbjct: 435 LNHSQVHAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLVKQTNGQVLVCAPSNIAVDQ 493
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R LD+ V + LA + +++AL+G
Sbjct: 494 LAEKIHRTGLKVVRLCAKSR-------ETLDSPV-----AFLA--LHNQLRALHG----A 535
Query: 316 KDKNTRREIQKELRTLS-KEERKRQQLAV---TDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+ + +++++E+ L+ +ER+ + L + ++ ADV+ T A +L +
Sbjct: 536 AELHKLQQLKEEMGELADADERRFRALRIAKECQLLAAADVICCTCVSAADSRLSHMRIK 595
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ QA E +A++ G R +L GDH QL P + +A K GL ++LFERL L
Sbjct: 596 CVLIDESTQATEPEVMVAVVCGVRQLVLVGDHCQLGPVIMCKKAAKAGLSQSLFERLV-L 654
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT----LLLIDIAG 486
G+ L VQYRMH + ++ S Y ++ + P ++ G
Sbjct: 655 LGNRPIR-LQVQYRMHPALSSFPSNVFYEGSLQNGERQLIGIDWQWPVPDKPMMFWSCYG 713
Query: 487 CDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKILR 542
EE S +N EA A R +++G+ IGIITPY Q V ++
Sbjct: 714 --QEELSSSGTSFLNRTEAANVEKLATRFLKAGIKPEQIGIITPYEGQRSYIVQFMQTQG 771
Query: 543 SKDDKLK-NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
+ KL MEV+ VD FQGREK+ II++ VRSN + +GFL+D RR+NVA+TRA+
Sbjct: 772 ALHSKLYLEMEVANVDAFQGREKDIIIVTCVRSNDHQGIGFLNDSRRLNVALTRAKFGLI 831
Query: 602 LVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ F+E + G
Sbjct: 832 IVGNAKVLSRHPLWNYLLSMFKEKGCLVEG 861
>gi|388583155|gb|EIM23458.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 745
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 182/661 (27%), Positives = 288/661 (43%), Gaps = 104/661 (15%)
Query: 15 LQEFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLL 74
+ ++V L+ LE++A T ++ +++G I +L + + GK
Sbjct: 89 VNDYVKKFTDLVKLEQQASEIKWNTRLLEWPIERLKQEGYCITDLSGYYTKR-MFGKHSA 147
Query: 75 EFQSTKGDVLPAHKFGTHDVVVLK--PNKADLGSPALGQGVVYRLKDSSITVAFDDIPEE 132
FQ G+ LP+H+F D+V L N+ + S + +L+ + F+
Sbjct: 148 IFQLQPGEQLPSHRFRKGDIVKLSLMNNETEKWSATIESSSSTQLQ-----LLFERKVPI 202
Query: 133 GLNSPLRLEKLANEVTYRRMKDAL-------IQLSKGVQNGPAAGLIPVLFGEQKPT--- 182
R++ N+V+YRR DAL ++ + N + L E
Sbjct: 203 NTEDRFRIDYTLNDVSYRRSLDALECLHLDPVEQASSSDNALKGTHLRDLLIEGSTNYDG 262
Query: 183 VLKKDIAFKPFNS----------------NLDHSQKDAISKALSSKNVFMLHGPPGTGKT 226
+ D + + S NL+ Q A++ + ++ ++ GPPGTGKT
Sbjct: 263 IFANDCWIRSWASRYSKPNPIRVEGDPILNLNPRQVQAVALMIGNR-ASLIQGPPGTGKT 321
Query: 227 TTV---VEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLES 283
T+ + ++ + K IL A +N+A DNI L +++ RLGH +R+ P++ +
Sbjct: 322 ATISNSINLMKKYFKIPHPILIAAHTNVATDNIASILSKTDLKITRLGHISRIAPELHKD 381
Query: 284 ALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAV 343
L AQV R + + L K R ++ +E R +E + +
Sbjct: 382 TLVAQVEAHPQYREVKHARIKSEGLFKKAYSMTGL-LREQLNEEARKQRREATRITKEIQ 440
Query: 344 TDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKG-SRCILAGDH 402
+IK+ADVV T G R L F +V IDE +QA E I L+KG S + GDH
Sbjct: 441 DKIIKSADVVCATCLGGNPRDLTGIDFPIVFIDEGSQATEPTTLIPLMKGCSHMSIIGDH 500
Query: 403 LQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKI 462
QL P + S EA ++ VQYRMH + + YNS++
Sbjct: 501 KQLAPIITSEEASRQD----------------------VQYRMHPDLSEIPNNIFYNSQL 538
Query: 463 ----------------KAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAE 506
H S ++ S+ + D E KD E STMNEGEA+
Sbjct: 539 IDGCRSSNGTLLSGYTPPHSSFTRKDSA-------LAFVNHDHSETKDGE-STMNEGEAQ 590
Query: 507 VAMAHAKRLIQSG--VHASDIGIITPYAAQVVLLKILRSKD----------------DKL 548
V M L + + +DIGI++PY AQ + L L ++D +L
Sbjct: 591 VIMTIIADLFEKNEDLKGTDIGIVSPYIAQTIELLRLINRDYYWRRRFADILGPQRVHEL 650
Query: 549 KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTET 608
+ +EV TVDGF+GREK+ II+S+ RSN +GFL D RR NV +TRA+R +V + T
Sbjct: 651 RQIEVKTVDGFEGREKQVIILSLTRSNEMGSIGFLDDPRRANVGLTRAKRCLMVVGNART 710
Query: 609 V 609
+
Sbjct: 711 L 711
>gi|358055281|dbj|GAA98737.1| hypothetical protein E5Q_05425 [Mixia osmundae IAM 14324]
Length = 1976
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 157/484 (32%), Positives = 236/484 (48%), Gaps = 75/484 (15%)
Query: 216 MLHGPPGTGKTTTVVEIILQEVKR--------GSKILACAASNIAVDNIVERL------- 260
++ GPPGTGKT T++ ++ + R K+L CA SN A+D I RL
Sbjct: 1319 LIQGPPGTGKTKTIIGLVGAFLARRKPSDGLPSEKLLICAPSNAAIDEIAARLKNGVRAE 1378
Query: 261 -----VPHRVRLVRLGHPARLLPQVLESALDAQV-------LRGDNSS--LASDIRKEMK 306
VP ++VR+G + + V + +D Q+ GD+ + S +R++M+
Sbjct: 1379 DNRMVVP---KIVRIGADSAIHAAVKDLFIDEQIDALLNDGSHGDDKADEALSALRRQME 1435
Query: 307 ALNGKLLKTKDKNTR--------------REIQ-KELRTLSKE---------ERKRQQ-- 340
L + +T+D R R IQ +E+ L +R+R Q
Sbjct: 1436 ELKAERAQTQDMLARQGLDDQERGRLADVRRIQTREIYELGLRLDAEKDKTGDRRRAQDT 1495
Query: 341 ---LAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL--VIIDEAAQALEIACWIALLKGS- 394
V+ + D++ TL+G+ + F VIIDEAAQ++EI+ I L G+
Sbjct: 1496 RRFQMRNQVLCDCDIICATLSGSGHDYMAQLPFQFETVIIDEAAQSVEISSLIPLRYGAK 1555
Query: 395 RCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSS 454
RCI+ GD QLPPTV S A+ +LF R+ + D V +L++QYRMH I W S
Sbjct: 1556 RCIMVGDPRQLPPTVLSTVAKDANYASSLFVRMQKNHADGV-HLLSIQYRMHPSISAWPS 1614
Query: 455 KQLYNSKIKAHPSGVKRTSST---EPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAH 511
+ Y +++ P T+S+ P L C ++ S N EA V +A
Sbjct: 1615 EVFYGGELRDGPGIAALTASSWHRNPLLPPYSFLHCSGAQQTGRNHSVFNPEEARVGVAI 1674
Query: 512 AKRLIQS-GVHASDI--GIITPYAAQVVLLKILRS---KDDKLKNMEVSTVDGFQGREKE 565
K+ ++ G SDI G++T Y AQV L+ L DD + ++ STVDGFQG+EK+
Sbjct: 1675 FKQFLKEVGDAISDIRVGVVTMYKAQVFELRRLFKLAFGDDIVHRLDFSTVDGFQGQEKD 1734
Query: 566 AIIISMVRSNSKKE-VGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
II S VRS + +GFL D RRMNVA+TRA+ ++ T+ +D +RLIE +
Sbjct: 1735 VIIFSCVRSGQGSDPIGFLRDARRMNVALTRAKSSLFILGHAPTLRTDPTWRRLIENAQA 1794
Query: 625 HAEY 628
A Y
Sbjct: 1795 RAMY 1798
>gi|195165354|ref|XP_002023504.1| GL20400 [Drosophila persimilis]
gi|194105609|gb|EDW27652.1| GL20400 [Drosophila persimilis]
Length = 879
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 146/471 (30%), Positives = 234/471 (49%), Gaps = 34/471 (7%)
Query: 174 VLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII 233
VLF +P + P +L+ SQ A+ AL + + ++ GPPGTGKT T I+
Sbjct: 104 VLFRGAQPKLFSA-----PNLPDLNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIV 157
Query: 234 LQEVKR-GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRG 292
Q VK+ G +L CA SN AVD + E++ +++VR+ +R + ++S + L
Sbjct: 158 YQLVKQHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSR---EAIDSPVSFLALHN 214
Query: 293 DNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADV 352
S+ ++ E+K KL + KD+ E R + + QL ++ ADV
Sbjct: 215 QIRSMETNT--ELK----KLQQLKDETGELSSADEKRYRNLKRGTENQL-----LEAADV 263
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS 411
+ T GA +L F ++IDE+ Q+ E C + ++ G++ IL GDH QL P V
Sbjct: 264 ICCTCVGAGDGRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMC 323
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
+A + GL ++LFERL L L VQYRMH + + S Y ++ R
Sbjct: 324 KKAARAGLSQSLFERLVVLGIRPFR--LEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDR 381
Query: 472 T-----SSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIG 526
+P + + EE S +N EA R +++GV IG
Sbjct: 382 RLKLDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGVKPEQIG 441
Query: 527 IITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVG 581
IITPY Q V ++ S +L + +E+++VD FQGREK+ II+S VRSN ++ +G
Sbjct: 442 IITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIG 501
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
FL+D RR+NVA+TRA+ +V + + ++ L+ ++++ + GS
Sbjct: 502 FLNDPRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGS 552
>gi|330918442|ref|XP_003298225.1| hypothetical protein PTT_08860 [Pyrenophora teres f. teres 0-1]
gi|311328707|gb|EFQ93678.1| hypothetical protein PTT_08860 [Pyrenophora teres f. teres 0-1]
Length = 1079
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 147/448 (32%), Positives = 229/448 (51%), Gaps = 44/448 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ K++ K + ++ GPPGTGKT T II K S++L CA SN+AVD
Sbjct: 440 LNASQINAV-KSVLQKPLSLIQGPPGTGKTVTSATIIYHLCKISQSQVLVCAPSNVAVDQ 498
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ ER+ ++ VR+ +R + +ES + L +D E+ LN
Sbjct: 499 LCERIHLTGLKTVRVTAKSR---EDVESPVGFLSLH--EQVRMNDTNVELNKLN------ 547
Query: 316 KDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+++ ++ LS ++E+K +QL A +++ ADV+ T GA +L F
Sbjct: 548 -------QLKSDVGELSSQDEKKFKQLTRAAEREILMAADVICCTCVGAGDPRLSKMKFR 600
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A GL ++LFERL L
Sbjct: 601 TVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAATAGLNQSLFERLVIL 660
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST---------EPTLLL 481
+ L VQYRMH + + S Y ++ + +R P +
Sbjct: 661 GCSPIR--LQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIRRDVDFPWPVVDSPMMFW 718
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVL 537
++ EE S +N EA+ R ++GV DIGIITPY Q V
Sbjct: 719 SNLGA---EEISASGTSYLNRTEAQNVEKIVTRFFKAGVQPGDIGIITPYEGQRSYVVSS 775
Query: 538 LKILRS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
++ S K + K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRA
Sbjct: 776 MQATGSFKKENYKEVEVASVDAFQGREKDFIILSCVRSNEHQGIGFLSDPRRLNVALTRA 835
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+ ++ + + +S L+ +F+E
Sbjct: 836 KYGLVILGNPKVLSKHPLWHYLLLHFKE 863
>gi|189207819|ref|XP_001940243.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976336|gb|EDU42962.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1079
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 147/448 (32%), Positives = 229/448 (51%), Gaps = 44/448 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ +A+ K++ K + ++ GPPGTGKT T II K S++L CA SN+AVD
Sbjct: 440 LNASQINAV-KSVLQKPLSLIQGPPGTGKTVTSATIIYHLCKISQSQVLVCAPSNVAVDQ 498
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ ER+ ++ VR+ +R + +ES + L +D E+ LN
Sbjct: 499 LCERIHLTGLKTVRVTAKSR---EDVESPVGFLSLH--EQVRMNDTNVELNKLN------ 547
Query: 316 KDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
+++ ++ LS ++E+K +QL A +++ ADV+ T GA +L F
Sbjct: 548 -------QLKSDVGELSSQDEKKFKQLTRAAEREILMAADVICCTCVGAGDPRLSKMKFR 600
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A GL ++LFERL L
Sbjct: 601 TVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAATAGLNQSLFERLVIL 660
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST---------EPTLLL 481
+ L VQYRMH + + S Y ++ + +R P +
Sbjct: 661 GCSPIR--LQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIRRDVDFPWPVVDSPMMFW 718
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVL 537
++ EE S +N EA+ R ++GV DIGIITPY Q V
Sbjct: 719 SNLGA---EEISASGTSYLNRTEAQNVEKIVTRFFKAGVQPGDIGIITPYEGQRSYVVSS 775
Query: 538 LKILRS-KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
++ S K + K +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRA
Sbjct: 776 MQATGSFKKENYKEVEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 835
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+ ++ + + +S L+ +F+E
Sbjct: 836 KYGLVILGNPKVLSKHPLWHYLLLHFKE 863
>gi|18859757|ref|NP_572767.1| Upf1 [Drosophila melanogaster]
gi|27923995|sp|Q9VYS3.2|RENT1_DROME RecName: Full=Regulator of nonsense transcripts 1 homolog
gi|16769416|gb|AAL28927.1| LD30316p [Drosophila melanogaster]
gi|22832121|gb|AAF48115.2| Upf1 [Drosophila melanogaster]
gi|220960128|gb|ACL92600.1| Upf1-PA [synthetic construct]
Length = 1180
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 144/471 (30%), Positives = 234/471 (49%), Gaps = 34/471 (7%)
Query: 174 VLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII 233
VLF +P + P +L+ SQ A+ AL + + ++ GPPGTGKT T I+
Sbjct: 434 VLFRGPQPKLFSA-----PHLPDLNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIV 487
Query: 234 LQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRG 292
Q VK G +L CA SN AVD + E++ +++VR+ +R + ++S + L
Sbjct: 488 YQLVKLHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSR---EAIDSPVSFLALHN 544
Query: 293 DNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADV 352
++ ++ E+K KL + KD+ E K R ++ A +++ ADV
Sbjct: 545 QIRNMETN--SELK----KLQQLKDETGELSSADE-----KRYRNLKRAAENQLLEAADV 593
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS 411
+ T GA +L F ++IDE+ Q+ E C + ++ G++ IL GDH QL P V
Sbjct: 594 ICCTCVGAGDGRLSRVKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMC 653
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
+A + GL ++LFERL L L VQYRMH + + S Y ++ R
Sbjct: 654 KKAARAGLSQSLFERLVVLGIRPFR--LEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDR 711
Query: 472 T-----SSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIG 526
+P + + EE S +N EA R +++G+ IG
Sbjct: 712 RLKLDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIG 771
Query: 527 IITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVG 581
IITPY Q V ++ S +L + +E+++VD FQGREK+ II+S VRSN ++ +G
Sbjct: 772 IITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIG 831
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
FL+D RR+NVA+TRA+ +V + + ++ L+ ++++ + GS
Sbjct: 832 FLNDPRRLNVALTRAKFGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGS 882
>gi|339251874|ref|XP_003371160.1| hypothetical protein Tsp_09417 [Trichinella spiralis]
gi|316968637|gb|EFV52895.1| hypothetical protein Tsp_09417 [Trichinella spiralis]
Length = 1030
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 152/456 (33%), Positives = 228/456 (50%), Gaps = 60/456 (13%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+HSQ A+ + L+ +++ ++ GPPGTGKT T I+ K G + IL CA SN+AV
Sbjct: 436 LNHSQVMAVREVLT-RSISLIQGPPGTGKTVTSASIVYHLAKAGGTPILVCAPSNVAV-- 492
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG----- 310
+R+ +R A+D+ V S LA + +++ L G
Sbjct: 493 ------------IRMCAKSR-------EAIDSPV-----SFLA--LHNQVRYLEGEEELD 526
Query: 311 KLLKTKDKNTRREIQKELR---TLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDN 367
KL + K++ E R SK ER D++K+ADVV T A + ++
Sbjct: 527 KLWQLKEETGELSSLDEYRFRFLRSKCER--------DLLKHADVVCCTCVAAGDPRFNH 578
Query: 368 TSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFER 426
F V+IDE+ QA E C I ++ G+R IL GDH QL P V +A + GL ++LFER
Sbjct: 579 IRFRAVLIDESTQATEPECLIPIMTGARQVILVGDHCQLGPVVMCKKAARAGLNQSLFER 638
Query: 427 LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT------SSTEPTLL 480
L L + L VQYRMH + + S Y ++ + +R PT+
Sbjct: 639 LVILGNRPIR--LQVQYRMHPLLSSLPSNLFYEGTLQNGVTEQERILEGVDFRWPNPTVP 696
Query: 481 LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ--VVLL 538
+ EE S +N EA A + ++SG+ A IGIITPY Q ++
Sbjct: 697 MFFWCTASQEEISSSGTSFLNRAEAAHIEKIATKFLRSGIRADQIGIITPYEGQRAYIVQ 756
Query: 539 KILRSK--DDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
+L S ++KL + +EV++VD FQGREK+ I++S VRSN +GFL+D RR+NVA+TR
Sbjct: 757 HMLLSGPLNNKLYQEIEVASVDAFQGREKDIILLSCVRSNEHSGIGFLNDPRRLNVALTR 816
Query: 596 ARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
AR +V + + +S L+ + E+ L G
Sbjct: 817 ARYGLIIVGNPKVLSRQPMWHSLLRFCRENHCLLDG 852
>gi|448531806|ref|XP_003870332.1| Nam7 protein [Candida orthopsilosis Co 90-125]
gi|380354686|emb|CCG24202.1| Nam7 protein [Candida orthopsilosis]
Length = 1014
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 186/640 (29%), Positives = 301/640 (47%), Gaps = 71/640 (11%)
Query: 22 MAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKG 81
PL+ LE + + + S+ L+ Q K + LN + L TL F++T
Sbjct: 270 FGPLVKLEADYDKNLK----ESQALEHIQVKWALGLNNR------HLASFTLSTFETT-- 317
Query: 82 DVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDS---SITVAFDD---IPEEGLN 135
D+ K D ++L+ + + G GQG + RL +S T+ + P L
Sbjct: 318 DL----KVAVGDEIILRYSGSQ-GDAWQGQGFILRLPNSYQEEFTLELNPSKVAPPTHLT 372
Query: 136 SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTV-----LKKDIAF 190
+ E + +Y RM+ A+ + + ++ + L G V L K +
Sbjct: 373 TDFTAEFVWKGTSYDRMQQAMKDFATN-DDSVSSFIYHKLLGHDVAPVEFDIELPKRFS- 430
Query: 191 KPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAAS 249
P + L+ SQ +A+ L + + ++ GPPGTGKT T I+ + KIL CA S
Sbjct: 431 HPKLTELNVSQANAVRSVLQ-RPLSLIQGPPGTGKTVTSATIVYHLSRLNKEKILVCAPS 489
Query: 250 NIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALN 309
N+AVD++ +L + +VRL +R + +ES++ + +L + + K K
Sbjct: 490 NVAVDHLAAKLDSLGLNVVRLTAKSR---EDVESSVS-------HLALHNIVNKTAKGEL 539
Query: 310 GKLLKTKDKNTRREIQKELRTLSKEERKR--QQLAVTD--VIKNADVVLTTLTGAVSRKL 365
KL+K K+ E+ LS E+ K+ + L ++ ++ DVV T GA ++L
Sbjct: 540 KKLIKLKN---------EVGELSAEDSKKYIKHLRSSELKILNKCDVVCCTCVGAADKRL 590
Query: 366 DNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLF 424
F V++DE+ QA E I ++KG++ IL GDH QL P + +A GL ++LF
Sbjct: 591 SQFKFRTVLVDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILDRKAADAGLKQSLF 650
Query: 425 ERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR----TSSTEPTL- 479
ERL L V L VQYRMH + + S Y ++ + R +S P +
Sbjct: 651 ERLVFL--GHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQDGVTNADRVVADSSFPWPVID 708
Query: 480 -LLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL 538
++ A EE +S +N EA RL + G+ IG+ITPY Q L
Sbjct: 709 TPMMFWANYGREELSSSGNSYLNRVEAMNVERIITRLFKDGIKPEQIGVITPYEGQRAYL 768
Query: 539 -------KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNV 591
L +K D+ +E+++VD FQGREK+ II+S VR+N + +GFLSD RR+NV
Sbjct: 769 VQFMSMNSTLLNKRDEYLEVEITSVDAFQGREKDFIILSCVRANDTQSIGFLSDPRRLNV 828
Query: 592 AVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
A+TRA+ ++ + +S + L+ +F E + G
Sbjct: 829 ALTRAKYGLLVLGNPRALSRNRLWNHLLVHFREKGCLVDG 868
>gi|194889307|ref|XP_001977057.1| GG18821 [Drosophila erecta]
gi|190648706|gb|EDV45984.1| GG18821 [Drosophila erecta]
Length = 1186
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 147/475 (30%), Positives = 235/475 (49%), Gaps = 42/475 (8%)
Query: 174 VLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII 233
VLF +P + P +L+ SQ A+ AL + + ++ GPPGTGKT T I+
Sbjct: 434 VLFRGPQPKLYSA-----PHLPDLNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIV 487
Query: 234 LQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRG 292
Q VK G +L CA SN AVD + E++ +++VR+ +R A+D+ V
Sbjct: 488 YQLVKLHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSR-------EAIDSPV--- 537
Query: 293 DNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQL----AVTDVIK 348
S LA + N +L K + +++ E LS + KR ++ A +++
Sbjct: 538 --SFLALHNQIRNMETNSELKKLQ------QLKDETGELSSADEKRYRILKRAAENQLLE 589
Query: 349 NADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPP 407
ADV+ T GA +L F ++IDE+ Q+ E C + ++ G++ IL GDH QL P
Sbjct: 590 AADVICCTCVGAGDGRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGP 649
Query: 408 TVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS 467
V +A + GL ++LFERL L L VQYRMH + + S Y ++
Sbjct: 650 VVMCKKAARAGLSQSLFERLVVLGIRPFR--LEVQYRMHPELSQFPSNFFYEGSLQNGVC 707
Query: 468 GVKRT-----SSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHA 522
R +P + + EE S +N EA R +++G+
Sbjct: 708 AEDRRLKLDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKP 767
Query: 523 SDIGIITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSK 577
IGIITPY Q V ++ S +L + +E+++VD FQGREK+ II+S VRSN +
Sbjct: 768 EQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNER 827
Query: 578 KEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
+ +GFL+D RR+NVA+TRA+ +V + + ++ L+ ++++ + GS
Sbjct: 828 QGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGS 882
>gi|195553850|ref|XP_002076779.1| GD24645 [Drosophila simulans]
gi|194202769|gb|EDX16345.1| GD24645 [Drosophila simulans]
Length = 1180
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 145/471 (30%), Positives = 233/471 (49%), Gaps = 34/471 (7%)
Query: 174 VLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII 233
VLF +P + P +L+ SQ A+ AL + + ++ GPPGTGKT T I+
Sbjct: 434 VLFRGPQPKLFSA-----PHLPDLNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIV 487
Query: 234 LQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRG 292
Q VK G +L CA SN AVD + E++ +++VR+ +R + ++S + L
Sbjct: 488 YQLVKLHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSR---EAIDSPVSFLALHN 544
Query: 293 DNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADV 352
++ ++ E+K KL + KD+ E R S + QL ++ ADV
Sbjct: 545 QIRNMETN--SELK----KLQQLKDETGELSSADEKRYRSLKRASENQL-----LEAADV 593
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS 411
+ T GA +L F ++IDE+ Q+ E C + ++ G++ IL GDH QL P V
Sbjct: 594 ICCTCVGAGDGRLSRVKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMC 653
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
+A + GL ++LFERL L L VQYRMH + + S Y ++ R
Sbjct: 654 KKAARAGLSQSLFERLVVLGIRPFR--LEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDR 711
Query: 472 T-----SSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIG 526
+P + + EE S +N EA R +++G+ IG
Sbjct: 712 RLKLDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIG 771
Query: 527 IITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVG 581
IITPY Q V ++ S +L + +E+++VD FQGREK+ II+S VRSN ++ +G
Sbjct: 772 IITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIG 831
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
FL+D RR+NVA+TRA+ +V + + ++ L+ ++++ + GS
Sbjct: 832 FLNDPRRLNVALTRAKFGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGS 882
>gi|326436499|gb|EGD82069.1| ATP-dependent helicase NAM7 [Salpingoeca sp. ATCC 50818]
Length = 1192
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 155/518 (29%), Positives = 253/518 (48%), Gaps = 37/518 (7%)
Query: 132 EGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQ-KPTVLKKDIAF 190
E +N+ LE + N + RM+ A+ + + + + L G Q LK D+
Sbjct: 521 ETVNTGYYLEFVWNSTVFDRMQSAMRRFAVN-EAAMSDYLFHRFLGHQLNLPQLKFDMPK 579
Query: 191 K---PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACA 247
+ P L+HSQ +AI L + + ++ GPPGTGKT T ++ V++ ++L CA
Sbjct: 580 RLSAPGLPELNHSQLNAIRTVLQ-QPLSLIQGPPGTGKTVTSATLVYHLVQQRGQVLVCA 638
Query: 248 ASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKA 307
SNIAV+++ +R+ V++VR+ R + L GD S L+ + +++
Sbjct: 639 PSNIAVEHLAQRIHLTGVKVVRVAAKTR------------EQLEGDASFLS--LHNQVEN 684
Query: 308 LNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDV-IKNADVVLTTLTGAVSRKL- 365
G TK ++E+ EL + +R + D+ ++ ADV+ T G R++
Sbjct: 685 YTGSSKFTKLTKLKKEL-GELSEADERMYRRLYKKIEDIFLRKADVICCTCAGGGDRRIV 743
Query: 366 DNTSFDLVIIDEAAQALEIACWIALLKGS-RCILAGDHLQLPPTVQSVEAEKKGLGRTLF 424
+ V++DEA QA E I L+ G+ + IL GDH QL P V +A GL +LF
Sbjct: 744 AGKPYRTVLVDEATQATEPEILIPLVLGANQVILVGDHCQLGPVVMCKKAANAGLAHSLF 803
Query: 425 ERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST------EPT 478
ERL ++G L VQYRMH + + S Y ++ + +R P
Sbjct: 804 ERLV-VHGVRPVR-LQVQYRMHPALSEFPSNTFYEGSLQNGVTAAEREQPAVDFPWPNPE 861
Query: 479 LLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVL 537
+ ++ A EE S +N EA R +++G+ IGIITPY Q +
Sbjct: 862 VPMLFYASMGREEMAASGSSYLNRTEAANVEKIVTRFMRAGITPDQIGIITPYEGQRAHI 921
Query: 538 LKILR----SKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAV 593
++ + ++ + +EV++VD FQGREK+ II+S RSN + +GFL+D RR+NVA+
Sbjct: 922 VQYMNFHGAARRSFYEALEVASVDSFQGREKDYIILSCTRSNDHQGIGFLNDPRRLNVAL 981
Query: 594 TRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
TRA+ LV + +S L+ +F+E + G
Sbjct: 982 TRAKYGLILVGNPRALSKQALWHNLLLHFKEQGVLVEG 1019
>gi|440904008|gb|ELR54581.1| Regulator of nonsense transcripts 1 [Bos grunniens mutus]
Length = 1156
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 149/454 (32%), Positives = 224/454 (49%), Gaps = 37/454 (8%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 505 DLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 563
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 564 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 612
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 613 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 667
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 668 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 727
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 728 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 785
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 786 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 845
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARR-- 598
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 846 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGE 905
Query: 599 -QCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
C GFL+ Y++E + G
Sbjct: 906 LSLAGPCRGGPSCIGGFLRCWEGYYKEQKVLVEG 939
>gi|340369264|ref|XP_003383168.1| PREDICTED: regulator of nonsense transcripts 1-like [Amphimedon
queenslandica]
Length = 1081
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 147/457 (32%), Positives = 229/457 (50%), Gaps = 46/457 (10%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+ SQ A+ K + K + ++ GPPGTGKT T I+ K G ++L CA SNIAVD
Sbjct: 452 LNPSQIYAV-KTVLQKPLGLIQGPPGTGKTVTSATIVYHLSKMGMGQVLVCAPSNIAVDQ 510
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALN------ 309
+ E++ +++VRL +R + ++S + L LA D E+K L
Sbjct: 511 LTEKIHKTGLKVVRLCAKSR---EAIDSPVSFLALHNQVIQLAKDSYPELKKLQQLKDDQ 567
Query: 310 GKLLKTKDK---NTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLD 366
G+L T +K + +R+++KEL + ADV+ T A +L
Sbjct: 568 GELSSTDEKRYTSLKRQLEKEL------------------LLGADVICCTCVSAGDPRLA 609
Query: 367 NTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFE 425
SF +V+IDE+ QA E C + ++ GS+ +L GDH QL P + +A L ++LFE
Sbjct: 610 KFSFKMVLIDESTQATEPECMVPIVMGSKQVVLVGDHCQLGPVIMCKKAANARLSQSLFE 669
Query: 426 RLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR----TSSTEPTLLL 481
RL L + L VQYRMH + + S Y+ ++ S +R + P +
Sbjct: 670 RLVLLNIKPIR--LEVQYRMHPALTEFPSSVFYDGTLQNAVSPEERRMDEVNFPWPNVDK 727
Query: 482 IDIAGCDM--EEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----V 535
C EE S +N EA +L+++GV IG+ITPY Q V
Sbjct: 728 PMFFWCSFGQEEISSSGTSYLNRTEAVNVEKVVTKLMKNGVKPVQIGVITPYEGQRAYVV 787
Query: 536 VLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVT 594
++ KL + +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+T
Sbjct: 788 QQMQFNGGMSSKLYEQLEVASVDAFQGREKDFIILSCVRSNEHQGIGFLNDARRLNVALT 847
Query: 595 RARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
RA+ ++ + + +S + LI+ ++E + G
Sbjct: 848 RAKYGVIIIGNAKVLSRNELWHHLIKEYQEQGLLVEG 884
>gi|71012553|ref|XP_758509.1| hypothetical protein UM02362.1 [Ustilago maydis 521]
gi|46098167|gb|EAK83400.1| hypothetical protein UM02362.1 [Ustilago maydis 521]
Length = 1604
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 153/523 (29%), Positives = 249/523 (47%), Gaps = 97/523 (18%)
Query: 176 FGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVV---EI 232
F + P V+ D P +L+ +Q A++ L + V ++ GPPGTGKT T+V ++
Sbjct: 1005 FARRDPVVIDGD----PL-PDLNSTQTQAVAMMLRER-VSLIQGPPGTGKTRTIVTAIKL 1058
Query: 233 ILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLR- 291
+ Q+ + I+ A +N+AVDN+ + + +R+VR+G AR + + LDA LR
Sbjct: 1059 LKQDFQVPHPIMLAAHTNVAVDNLADGCIKAGLRVVRIGPSARARAGIDQYTLDAYFLRH 1118
Query: 292 -----------------------------GDNSSLASDIRKEM---------KALNGKLL 313
G + +AS +R+ + +A + + +
Sbjct: 1119 PAKQRLDQIKRQLDTLDRLKSEYELGRMGGSDPCIASSVRERLAEDEAIGQTEAQSWENM 1178
Query: 314 KTKDKNTRREIQKELRTLSKE----ERKRQQLAVT----------DVIKNADVVLTTLTG 359
+ + R Q + T S+E +++ +L T +++ DV+ +
Sbjct: 1179 MAEREEEREAAQPKGGTASEEYETIKKQLNRLKATYFFLRASIRGEILNGVDVICGSAIA 1238
Query: 360 AVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCI-LAGDHLQLPPTVQSVEAEKKG 418
A S +LD +V DEA+ A E + L+KG R + + GDH QLPP V S EA+K G
Sbjct: 1239 AGSPELDMIDLPVVFFDEASMATEPVSLVPLMKGCRHLSIIGDHKQLPPVVTSAEAKKAG 1298
Query: 419 LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK--------------A 464
L R+LFERL + ML VQ+RMH + ++++ Y+ ++
Sbjct: 1299 LSRSLFERLIQSRSSIPSIMLNVQFRMHPTLAEFANQTFYDGALQNGTGTELIAPVASSY 1358
Query: 465 HPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG--VHA 522
PS L ID G E K + S N EA + + L++ +
Sbjct: 1359 WPSCAGVAKQDTQRLCFIDHKG--RETKAENSSSLRNASEARIVLDVVTDLLRQNPDLTG 1416
Query: 523 SDIGIITPYAAQVVLLK----------------ILRSKDDKLKNMEVSTVDGFQGREKEA 566
DIG++TPYA Q VLL+ IL ++ +L N++V TVDGF+GREK+
Sbjct: 1417 DDIGVVTPYAGQQVLLEKMLHNEASLSRQQAAGILGTRSSELGNIDVHTVDGFEGREKKV 1476
Query: 567 IIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
I+ S VR+N++ VGFL+D RR+NVA+TRA+ L+ + +T+
Sbjct: 1477 ILFSTVRTNAQGYVGFLADGRRLNVALTRAQSALFLIGNIDTL 1519
>gi|195356067|ref|XP_002044503.1| GM13241 [Drosophila sechellia]
gi|194131805|gb|EDW53739.1| GM13241 [Drosophila sechellia]
Length = 1180
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 145/471 (30%), Positives = 233/471 (49%), Gaps = 34/471 (7%)
Query: 174 VLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII 233
VLF +P + P +L+ SQ A+ AL + + ++ GPPGTGKT T I+
Sbjct: 434 VLFRGPQPKLFSA-----PHLPDLNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIV 487
Query: 234 LQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRG 292
Q VK G +L CA SN AVD + E++ +++VR+ +R + ++S + L
Sbjct: 488 YQLVKLHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSR---EAIDSPVSFLALHN 544
Query: 293 DNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADV 352
++ ++ E+K KL + KD+ E R S + QL ++ ADV
Sbjct: 545 QIRNMETN--SELK----KLQQLKDETGELSSADEKRYRSLKRASENQL-----LEAADV 593
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS 411
+ T GA +L F ++IDE+ Q+ E C + ++ G++ IL GDH QL P V
Sbjct: 594 ICCTCVGAGDGRLSRVKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMC 653
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
+A + GL ++LFERL L L VQYRMH + + S Y ++ R
Sbjct: 654 KKAARAGLSQSLFERLVVLGIRPFR--LEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDR 711
Query: 472 T-----SSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIG 526
+P + + EE S +N EA R +++G+ IG
Sbjct: 712 RLKLDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIG 771
Query: 527 IITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVG 581
IITPY Q V ++ S +L + +E+++VD FQGREK+ II+S VRSN ++ +G
Sbjct: 772 IITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIG 831
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
FL+D RR+NVA+TRA+ +V + + ++ L+ ++++ + GS
Sbjct: 832 FLNDPRRLNVALTRAKFGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGS 882
>gi|347965371|ref|XP_322028.4| AGAP001133-PA [Anopheles gambiae str. PEST]
gi|333470541|gb|EAA01007.4| AGAP001133-PA [Anopheles gambiae str. PEST]
Length = 1161
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 153/505 (30%), Positives = 254/505 (50%), Gaps = 36/505 (7%)
Query: 147 VTYRRMKDALIQLS---KGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNS----NLDH 199
++ RM+ AL + + K V N A L+ + + VL + K F++ +L+
Sbjct: 403 TSFERMQQALRKFAMDAKSVSNYIYARLLGNVRADGAEEVLFRLNLPKHFSAPNLPDLNR 462
Query: 200 SQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVDNIVE 258
SQ A+ AL + + ++ GPPGTGKT T I+ Q + S IL CA SN AVD + E
Sbjct: 463 SQVYAVRHALQ-RPLSLIQGPPGTGKTVTSATIVYQLARLNSGPILVCAPSNTAVDQLTE 521
Query: 259 RLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDK 318
++ +++VR+ +R + ++S + L ++A + E+K KL + KD+
Sbjct: 522 KIHRTNLKVVRVCARSR---EAIDSPVSFLALHNQIRNMAQN--SELK----KLQQLKDE 572
Query: 319 NTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEA 378
+ E R S +++ ++L ++ ADV+ T GA +L F+ ++IDE+
Sbjct: 573 TGELSLSDERRYRSLKKQAEREL-----LEAADVICCTCVGAGDLRLQRIKFNSILIDES 627
Query: 379 AQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS 437
Q+ E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 628 MQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVAL--GIRPF 685
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTE-----PTLLLIDIAGCDMEEK 492
L VQYRMH + + S Y ++ +R + P + + EE
Sbjct: 686 RLEVQYRMHPELSQFPSNFFYEGSLQNGVCADERKLKVDFPWPSPDCPMFFLVTQGQEEI 745
Query: 493 KDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKILRSKDDKL 548
S +N EA R +++G+ IGIITPY Q V ++ S KL
Sbjct: 746 AGSGTSYLNRTEASNVEKITTRFLKAGIKPDQIGIITPYEGQRAYLVQYMQYQGSLHSKL 805
Query: 549 -KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTE 607
+ +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRA+ +V + +
Sbjct: 806 YQEIEIASVDAFQGREKDIIIMSCVRANEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPK 865
Query: 608 TVSSDGFLKRLIEYFEEHAEYLSGS 632
++ L+ ++++ + GS
Sbjct: 866 VLAKQELWNHLLNFYKDKKVLVEGS 890
>gi|194770581|ref|XP_001967370.1| GF21587 [Drosophila ananassae]
gi|190618050|gb|EDV33574.1| GF21587 [Drosophila ananassae]
Length = 1180
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 145/471 (30%), Positives = 234/471 (49%), Gaps = 34/471 (7%)
Query: 174 VLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII 233
VLF +P + P +L+ SQ A+ AL + + ++ GPPGTGKT T I+
Sbjct: 434 VLFRGPQPKLYSA-----PHLPDLNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIV 487
Query: 234 LQEVKR-GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRG 292
Q VK+ G +L CA SN AVD + E++ +++VR+ +R + ++S + L
Sbjct: 488 YQLVKQHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSR---EAIDSPVSFLALHN 544
Query: 293 DNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADV 352
++ ++ E+K KL + KD+ E R S + QL ++ ADV
Sbjct: 545 QIRNMETN--SELK----KLQQLKDETGELSSADEKRYRSLKRGTENQL-----LEAADV 593
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS 411
+ T GA +L F ++IDE+ Q+ E C + ++ G++ IL GDH QL P V
Sbjct: 594 ICCTCVGAGDGRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMC 653
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
+A + GL ++LFERL L L VQYRMH + + S Y ++ R
Sbjct: 654 KKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDR 711
Query: 472 T-----SSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIG 526
+P + + EE S +N EA R +++G+ IG
Sbjct: 712 RLKLDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIG 771
Query: 527 IITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVG 581
IITPY Q V ++ S +L + +E+++VD FQGREK+ II+S VRSN ++ +G
Sbjct: 772 IITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIG 831
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
FL+D RR+NVA+TRA+ +V + + ++ L+ ++++ + GS
Sbjct: 832 FLNDPRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGS 882
>gi|388580348|gb|EIM20663.1| hypothetical protein WALSEDRAFT_54922 [Wallemia sebi CBS 633.66]
Length = 941
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 140/448 (31%), Positives = 226/448 (50%), Gaps = 30/448 (6%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+HSQ A+ K++ K + ++ GPPGTGKT T ++ K ++L CA SN+AVD
Sbjct: 373 LNHSQMYAV-KSVLQKPLSLIQGPPGTGKTVTSASVVYHLSKMNPGQVLVCAPSNVAVDQ 431
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ ++ VRL +R + ++S + L ++ I E++ L +LK
Sbjct: 432 LCEKIHLTGLKTVRLTAKSR---EAVDSPISFLTLHEQVANSTHHI--ELQKLF--MLKN 484
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVII 375
+ +++ +TL++ K +++ ADV+ T GA +L F V+I
Sbjct: 485 EQGELSSSDERKFKTLTRVCEK-------EILNAADVICCTCVGAGDPRLSKLKFRTVLI 537
Query: 376 DEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDE 434
DEA QA E C I L+ G + +L GDH QL P + + +A + GL ++LFERL L
Sbjct: 538 DEATQAAEPECTIPLIMGCKQAVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVMLGNRP 597
Query: 435 VTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTE------PTLLLIDIAGCD 488
+ L VQYRMH + + S Y ++ + +R P +
Sbjct: 598 IR--LQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPIPDTPMFFYQNLG 655
Query: 489 MEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKILRSK 544
EE S +N EA + ++GV + IGI+TPY Q V ++ +
Sbjct: 656 QEEISSSGTSFLNRTEASNCEKIVTKFFKAGVVPAQIGIVTPYEGQRSYIVNYMQFNGAL 715
Query: 545 DDKLKN-MEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLV 603
+L N +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TRA+ ++
Sbjct: 716 KKELYNQVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVAMTRAKYGAVIL 775
Query: 604 CDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+ + +S L+ +F+E + G
Sbjct: 776 GNPKILSKHPLWHHLLTHFKEKKTLVEG 803
>gi|224138824|ref|XP_002326699.1| predicted protein [Populus trichocarpa]
gi|222834021|gb|EEE72498.1| predicted protein [Populus trichocarpa]
Length = 1256
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 145/445 (32%), Positives = 222/445 (49%), Gaps = 55/445 (12%)
Query: 206 SKALSSKNVF-----MLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERL 260
S+ L+ KNV ++ GPPGTGKT T I+L CA SN+AVD + E++
Sbjct: 485 SQVLAVKNVLQKPISLIQGPPGTGKTVTSAAIVL----------VCAPSNVAVDQLAEKI 534
Query: 261 VPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNT 320
+++VRL +R + + S ++ L L + + E+ KL + KD+
Sbjct: 535 SATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSEKSELH----KLQQLKDE-- 585
Query: 321 RREIQKELRTLSKEERKRQQLAVT---DVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDE 377
Q EL S +E+K + L ++ ++ADV+ T GA +L N F V+IDE
Sbjct: 586 ----QGELS--SSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDE 639
Query: 378 AAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT 436
+ QA E C I L+ G++ + GDH QL P + +A + GL ++LFERL L +
Sbjct: 640 STQATEPECLIPLVLGAKQVVFVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPI- 698
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS---------TEPTLLLIDIAGC 487
L VQYRMH + + S Y ++ + +R SS P + +
Sbjct: 699 -RLQVQYRMHPSLSEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMG-- 755
Query: 488 DMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD--IGIITPYAAQVVLLKILRSKD 545
EE S +N EA ++SGV S IG+ITPY Q + S++
Sbjct: 756 -QEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQACIGVITPYEGQRAYIVNYMSRN 814
Query: 546 DKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQC 600
L K +EV++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 815 GALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGI 874
Query: 601 CLVCDTETVSSDGFLKRLIEYFEEH 625
++ + + +S L+ +++EH
Sbjct: 875 VILGNPKVLSKQPLWNSLLTHYKEH 899
>gi|294929939|ref|XP_002779430.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
gi|239888538|gb|EER11225.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
Length = 923
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 164/531 (30%), Positives = 261/531 (49%), Gaps = 57/531 (10%)
Query: 102 ADLGSP---ALGQGVVYRLKDSSITVAFDDIPEEG-------LNSPLRLEKLANEVTYRR 151
AD GS +G G V +L SS V + P+ + S +E + ++ R
Sbjct: 350 ADWGSDNEGWIGVGHVTKLMQSSEEVCVELRPQYSHQKGPWDITSGYTVEFVWKATSFDR 409
Query: 152 MKDALIQLSKGVQNGPAAGLI-PVLFGEQKPTVLKKDIAFKPFN------SNLDHSQKDA 204
M++AL + V + +G+I +L G+ T I P N L+HSQ A
Sbjct: 410 MQNALKAFA--VDDTSVSGVIYHMLLGQAIETNTTIRIHNPPKNWTAPNLPQLNHSQVQA 467
Query: 205 ISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDNIVERLVPH 263
+ KAL + + ++ GPPGTGKT T II ++ ++L A SNIAVD + E++
Sbjct: 468 VQKALE-QPLSLIQGPPGTGKTVTSATIIYHLARQHQGQVLVTAPSNIAVDQLAEKIHLT 526
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRRE 323
+++VR+ +R + L S ++ L ++ + KE K L +
Sbjct: 527 GLKVVRILAKSR---ECLYSPVEFLSLHTQIRNMRTPQAKEFKKL-------------FD 570
Query: 324 IQKELRTLSKEERKRQQLAVTDV----IKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAA 379
+++E+ L+ + KR ++ + V ++NADV+ TT GA +L F +V++DEA
Sbjct: 571 LKEEVGELTSSDEKRFRILRSQVERELLENADVICTTCAGAGDPRLGKLRFKMVLVDEAT 630
Query: 380 QALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSM 438
QA E I + G++ IL GDH QL P V +A K G ++LFERL L +
Sbjct: 631 QACEPEALIPICNGAKQVILVGDHKQLGPVVMCKKAAKAGFKQSLFERLIALGVRPIR-- 688
Query: 439 LTVQYRMHEHIMNWSSKQLYNSKIKA-------HPSGVKRTSSTEPTLLLIDIAGCDMEE 491
L VQYRMH + + S+ Y+ ++ SGVK E + EE
Sbjct: 689 LEVQYRMHPSLAEFPSQTFYDGCLQNGITMEDRQVSGVKFPWPREEMPMFF-YNSTGQEE 747
Query: 492 KKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKL--- 548
S +N EA +++G+ S IG++TPY Q ++ + + L
Sbjct: 748 ISASGTSYLNRSEAINIEKIITYFLRAGLKGSQIGVVTPYEGQRAYIQQVLQRQTTLSAK 807
Query: 549 --KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
+++E+++VD FQGREK+ I++S VRSN + +GFL+D RR+NVA+TRAR
Sbjct: 808 MYESIEIASVDAFQGREKDFIVLSCVRSNQRAGLGFLNDPRRLNVALTRAR 858
>gi|307102593|gb|EFN50864.1| hypothetical protein CHLNCDRAFT_59413 [Chlorella variabilis]
Length = 762
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 153/466 (32%), Positives = 231/466 (49%), Gaps = 83/466 (17%)
Query: 198 DHSQKDAISKALSSKNVFMLHGPPGTGKTTTV---VEIILQEVKRGS--------KILAC 246
+ SQ A++ +L+ + + GPPGTGKT T+ VE++++ V+ GS ILA
Sbjct: 320 NESQVRAVAASLT-RTFTLWQGPPGTGKTRTLLAFVEVMVRAVE-GSVVRRHAQGAILAV 377
Query: 247 AASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
A +N A DN+++ L+ +R VR+G PA++ P++ + L+A V + A+ +R
Sbjct: 378 ADTNAAADNLLDGLLARGIRAVRVGQPAKVRPELRHACLEALVQSTPSGQRAARLR---- 433
Query: 307 ALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLD 366
A DV VV+ T GA +L+
Sbjct: 434 -----------------------------------AGADVFLQ-QVVVATCNGAGDARLE 457
Query: 367 NTSFDLVIIDEAAQALEIACWIALLKGSRCI-LAGDHLQLPPTVQSVEA-EKKGLGRTLF 424
F +V++DE AQA E + + L+KG++C+ +AGD QLPPTV S A E L LF
Sbjct: 458 AQCFRIVVLDECAQATEPSSLVPLVKGAQCVVMAGDQRQLPPTVVSERAKEMYHLDVPLF 517
Query: 425 ERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKA------HPS--GVKRTSSTE 476
RL L G + +L VQYRMH I + S+ Y+ ++++ P GV T+
Sbjct: 518 TRL--LEGGVSSRLLEVQYRMHPAISEFPSRHFYSGRVQSGVTQQDRPPVRGVPWTNPAC 575
Query: 477 PTLLLIDIA-GCDME----------EKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDI 525
P +L I+IA G + + S N EAEVAM +R++Q I
Sbjct: 576 P-VLFINIAEGSEQQALAGNNRRGGSGDSSGASYSNSEEAEVAMKALQRVLQEDDSVQSI 634
Query: 526 GIITPYAAQVVLLKILRSKDDKLKN------MEVSTVDGFQGREKEAIIISMVRSNSKKE 579
+++PY QV LL L S+ + + + VSTVDG+QGRE + +I S VRSN
Sbjct: 635 VLLSPYNGQVRLLTSLLSRAELPEGAADRCQITVSTVDGYQGRESDVVIFSTVRSNPAGR 694
Query: 580 VGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEH 625
VGFLSD RR+NVA+TRARR ++ + T+ D +++ E
Sbjct: 695 VGFLSDERRLNVAITRARRGLIVLGNQATLQHDPNWGAWMQWVAEQ 740
>gi|183220768|ref|YP_001838764.1| putative helicase [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
gi|167779190|gb|ABZ97488.1| Putative helicase [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 593
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 127/447 (28%), Positives = 222/447 (49%), Gaps = 26/447 (5%)
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A+ + S + M+ GPPGTGKTT +++ + Q ++ +L +N A D IVE +
Sbjct: 159 ALERIFSISDFGMVFGPPGTGKTTLLMQAVSQITQQKESVLTLCPTNFACDYIVELAIQK 218
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK------D 317
+R++RLG+ ++ +VL LD + + + + E+K + K+ K +
Sbjct: 219 GIRVIRLGNSTKIKEEVLPYHLDHLIQTHPDQKQIQNWQTELKVIQKKINSWKRNFGKEE 278
Query: 318 KNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDE 377
+ R ++KE + L R+++ T ++ ++++++T G + FD +DE
Sbjct: 279 REERNNLRKEAKFLVHTIREQESTIRTKLLDTSELIVSTFAGFGNEFKKGRKFDYTFVDE 338
Query: 378 AAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS 437
A Q+++ C++A+ G + GD QL V + K + + E++ DL E T
Sbjct: 339 ATQSVDPGCYMAMFSGKKTFFFGDPKQL--GVNYSHPDHKTVA-SFLEKVIDLDSGERTI 395
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS-------STEPTLLLIDIAGCDM- 489
L Q+RM I+ + + Y +K+ HP+ TS ++ +L +D AG D
Sbjct: 396 FLEKQFRMKPEILGFPNLTYYENKVFTHPNLTFLTSPPFSEIFGSDTPILWVDTAGSDTS 455
Query: 490 EEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK 549
EE + EE S NE E + + + G+ +++PY QV L LR+ +
Sbjct: 456 EETEGEEMSFFNETE----IGLIETFFERGLPKETTAVVSPYRGQVDKLN-LRADGRWIG 510
Query: 550 NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
T+D FQGRE E +I+S+VRSN E+GFL + +R+NVA+TRA+ L+ D+ T+
Sbjct: 511 Q----TIDSFQGRESEIVILSLVRSNPDGEIGFLMNPKRLNVALTRAKSHLILIGDSSTL 566
Query: 610 SSDGFLKRLIEYFEEHAEYLSGSEYLN 636
+ L Y E + E S E+L+
Sbjct: 567 CRHKEFQDLYNYIESNGEIRSIYEFLD 593
>gi|195480688|ref|XP_002101353.1| GE17585 [Drosophila yakuba]
gi|194188877|gb|EDX02461.1| GE17585 [Drosophila yakuba]
Length = 1187
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 144/471 (30%), Positives = 234/471 (49%), Gaps = 34/471 (7%)
Query: 174 VLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII 233
VLF +P + P +L+ SQ A+ AL + + ++ GPPGTGKT T I+
Sbjct: 434 VLFRGAQPKLYSA-----PHLPDLNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIV 487
Query: 234 LQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRG 292
Q VK G +L CA SN AVD + E++ +++VR+ +R + ++S + L
Sbjct: 488 YQLVKLHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSR---EAIDSPVSFLALHN 544
Query: 293 DNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADV 352
++ ++ E+K KL + KD+ E K R ++ A +++ ADV
Sbjct: 545 QIRNMETN--SELK----KLQQLKDETGELSSADE-----KRYRSLKRAAENQLLEAADV 593
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS 411
+ T GA +L F ++IDE+ Q+ E C + ++ G++ IL GDH QL P V
Sbjct: 594 ICCTCVGAGDGRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMC 653
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
+A + GL ++LFERL L L VQYRMH + + S Y ++ R
Sbjct: 654 KKAARAGLSQSLFERLVVLGIRPFR--LEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDR 711
Query: 472 T-----SSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIG 526
+P + + EE S +N EA R +++G+ IG
Sbjct: 712 RLKLDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIG 771
Query: 527 IITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVG 581
IITPY Q V ++ S +L + +E+++VD FQGREK+ II+S VRSN ++ +G
Sbjct: 772 IITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIG 831
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
FL+D RR+NVA+TRA+ +V + + ++ L+ ++++ + GS
Sbjct: 832 FLNDPRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGS 882
>gi|198468730|ref|XP_002134102.1| GA29178 [Drosophila pseudoobscura pseudoobscura]
gi|198146545|gb|EDY72729.1| GA29178 [Drosophila pseudoobscura pseudoobscura]
Length = 1209
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 146/471 (30%), Positives = 234/471 (49%), Gaps = 34/471 (7%)
Query: 174 VLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII 233
VLF +P + P +L+ SQ A+ AL + + ++ GPPGTGKT T I+
Sbjct: 434 VLFRGAQPKLFSA-----PNLPDLNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIV 487
Query: 234 LQEVKR-GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRG 292
Q VK+ G +L CA SN AVD + E++ +++VR+ +R + ++S + L
Sbjct: 488 YQLVKQHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSR---EAIDSPVSFLALHN 544
Query: 293 DNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADV 352
S+ ++ E+K KL + KD+ E R + + QL ++ ADV
Sbjct: 545 QIRSMETNT--ELK----KLQQLKDETGELSSADEKRYRNLKRGTENQL-----LEAADV 593
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS 411
+ T GA +L F ++IDE+ Q+ E C + ++ G++ IL GDH QL P V
Sbjct: 594 ICCTCVGAGDGRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMC 653
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
+A + GL ++LFERL L L VQYRMH + + S Y ++ R
Sbjct: 654 KKAARAGLSQSLFERLVVLGIRPFR--LEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDR 711
Query: 472 T-----SSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIG 526
+P + + EE S +N EA R +++GV IG
Sbjct: 712 RLKLDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGVKPEQIG 771
Query: 527 IITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVG 581
IITPY Q V ++ S +L + +E+++VD FQGREK+ II+S VRSN ++ +G
Sbjct: 772 IITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIG 831
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
FL+D RR+NVA+TRA+ +V + + ++ L+ ++++ + GS
Sbjct: 832 FLNDPRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGS 882
>gi|323454972|gb|EGB10841.1| hypothetical protein AURANDRAFT_22049 [Aureococcus anophagefferens]
Length = 1026
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 170/549 (30%), Positives = 270/549 (49%), Gaps = 50/549 (9%)
Query: 105 GSPALGQGVVYRLKDSSITVAF--DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKG 162
G P G V RL D I + + P E ++ + +Y RM++AL L+
Sbjct: 310 GKPWEASGHVLRLADGEIALELRTSNAPTEVTECGFVVDFVWKGTSYDRMQNALKNLA-- 367
Query: 163 VQNGPAAG-LIPVLFGEQ-KPTVLKKDIAFK-------PFNSNLDHSQKDAISKALSSKN 213
V + +G L L G +P VLK A P +L+HSQ A+ +++ ++
Sbjct: 368 VDDTSLSGYLYHRLLGHDVEPQVLKGGAAASSSRRAGVPGLPDLNHSQAAAV-RSVVTQP 426
Query: 214 VFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDNIVERLVPHRVRLVRLGH 272
+ ++ GPPGTGKT T I+ K+G ++L A SNIAVD + E++ +++VRL
Sbjct: 427 LSLIQGPPGTGKTVTSAAIVWHLAKQGMGQVLVTAPSNIAVDQLTEKIHATGLKVVRLCA 486
Query: 273 PARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLS 332
+R + + +++D L ++ DI A KL++ K E Q EL +
Sbjct: 487 KSR---EAISTSVDHLTLH----TMLRDIDTPEIAELRKLMRLK------EDQGELAP-A 532
Query: 333 KEERKRQQLAVTD--VIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIAL 390
E++ R+ A T+ ++K ADV+ TT A +L + F V+IDEA QA E I +
Sbjct: 533 DEKQFRKLRANTERVLLKAADVICTTCACAGDPRLGGSRFRQVLIDEATQATEPESLIPI 592
Query: 391 LKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHI 449
+ G++ +L GDH QL P + A K GL ++L+ERL L + L VQYR H +
Sbjct: 593 VLGAKQLVLVGDHQQLGPVIMCKGAAKAGLTQSLYERLVALGIRPIR--LQVQYRSHPCL 650
Query: 450 MNWSSKQLYNSKIKAHPSGVKRTSSTEP---------TLLLIDIAGCDMEEKKDEEDSTM 500
+ S Y ++ S +R EP ++ AG EE S +
Sbjct: 651 SEFPSAMFYEGTLQNGVSEGERDLEGEPRFPWPNPEAPMMFYVCAGA--EEMSASGTSFL 708
Query: 501 NEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILRS----KDDKLKNMEVST 555
N EA ++ G+ IG+ITPY Q ++ + S + D + +EV++
Sbjct: 709 NRSEAASIERLVTHYLKLGLDPDQIGVITPYEGQRAYVVHHMASAGALRADVYERVEVAS 768
Query: 556 VDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFL 615
VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRA+ ++ ++ D
Sbjct: 769 VDSFQGREKDVIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGLVILGAARVLAQDALW 828
Query: 616 KRLIEYFEE 624
L+ +F++
Sbjct: 829 HELLTHFKK 837
>gi|189910869|ref|YP_001962424.1| DNA and RNA helicase subunit [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775545|gb|ABZ93846.1| DNA and RNA helicase subunit [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
Length = 608
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 127/447 (28%), Positives = 222/447 (49%), Gaps = 26/447 (5%)
Query: 204 AISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPH 263
A+ + S + M+ GPPGTGKTT +++ + Q ++ +L +N A D IVE +
Sbjct: 174 ALERIFSISDFGMVFGPPGTGKTTLLMQAVSQITQQKESVLTLCPTNFACDYIVELAIQK 233
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK------D 317
+R++RLG+ ++ +VL LD + + + + E+K + K+ K +
Sbjct: 234 GIRVIRLGNSTKIKEEVLPYHLDHLIQTHPDQKQIQNWQTELKVIQKKINSWKRNFGKEE 293
Query: 318 KNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDE 377
+ R ++KE + L R+++ T ++ ++++++T G + FD +DE
Sbjct: 294 REERNNLRKEAKFLVHTIREQESTIRTKLLDTSELIVSTFAGFGNEFKKGRKFDYTFVDE 353
Query: 378 AAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTS 437
A Q+++ C++A+ G + GD QL V + K + + E++ DL E T
Sbjct: 354 ATQSVDPGCYMAMFSGKKTFFFGDPKQL--GVNYSHPDHKTVA-SFLEKVIDLDSGERTI 410
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS-------STEPTLLLIDIAGCDM- 489
L Q+RM I+ + + Y +K+ HP+ TS ++ +L +D AG D
Sbjct: 411 FLEKQFRMKPEILGFPNLTYYENKVFTHPNLTFLTSPPFSEIFGSDTPILWVDTAGSDTS 470
Query: 490 EEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDDKLK 549
EE + EE S NE E + + + G+ +++PY QV L LR+ +
Sbjct: 471 EETEGEEMSFFNETE----IGLIETFFERGLPKETTAVVSPYRGQVDKLN-LRADGRWIG 525
Query: 550 NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
T+D FQGRE E +I+S+VRSN E+GFL + +R+NVA+TRA+ L+ D+ T+
Sbjct: 526 Q----TIDSFQGRESEIVILSLVRSNPDGEIGFLMNPKRLNVALTRAKSHLILIGDSSTL 581
Query: 610 SSDGFLKRLIEYFEEHAEYLSGSEYLN 636
+ L Y E + E S E+L+
Sbjct: 582 CRHKEFQDLYNYIESNGEIRSIYEFLD 608
>gi|324500307|gb|ADY40148.1| Regulator of nonsense transcripts 1 [Ascaris suum]
Length = 1087
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 148/467 (31%), Positives = 233/467 (49%), Gaps = 53/467 (11%)
Query: 187 DIAFK---------PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV 237
DI FK P L+HSQ A+ L + + ++ GPPGTGKT T I+ V
Sbjct: 417 DIVFKVQLPKRFSAPGLPELNHSQVQAVKMVLQ-RPLSLIQGPPGTGKTVTSATIVYHLV 475
Query: 238 KRGS-KILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSS 296
++ S ++L CA SNIAVD + E++ +++VRL +R LD+ V +
Sbjct: 476 RQTSGQVLVCAPSNIAVDQLAEKIHRTGLKVVRLCAKSR-------ETLDSPV-----AF 523
Query: 297 LASDIRKEMKALNGKLLKTKDKNTRREI-------QKELRTLSKEERKRQQLAVTDVIKN 349
LA + ++KA+ G K + + EI ++ RTL + K+ ++
Sbjct: 524 LA--LHNQLKAVQGAAELHKLQQLKEEIGELADADERRFRTLRMAKEKQ-------LLGA 574
Query: 350 ADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPT 408
ADV+ T A +L + V+IDE+ QA E +A+++G + +L GDH QL P
Sbjct: 575 ADVICCTCVSAADNRLSHMRIKCVLIDESTQATEPEVMVAVVRGVKQLVLVGDHCQLGPV 634
Query: 409 VQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK-AHPS 467
+ +A K GL ++LFERL L + L VQYRMH + + S Y ++
Sbjct: 635 IMCKKAAKAGLSQSLFERLVVLGTRPIR--LQVQYRMHPALSAFPSNVFYEGTLQNGVTQ 692
Query: 468 GVKRTSSTE-----PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHA 522
G ++ + + P ++ + EE S +N EA A R +++G+
Sbjct: 693 GERQLAGVDWQWPVPDKPMMFWSCYGQEELSPSGTSYLNRTEAANVEKVATRFLKAGLRP 752
Query: 523 SDIGIITPYAAQ----VVLLKILRSKDDKLK-NMEVSTVDGFQGREKEAIIISMVRSNSK 577
IGIITPY Q V ++ + KL MEV+ VD FQGREK+ II++ VRSN
Sbjct: 753 EQIGIITPYEGQRSYIVQFMQTQGALHSKLYLEMEVANVDAFQGREKDIIIVTCVRSNEH 812
Query: 578 KEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+ +GFL+D RR+NVA+TRA+ ++ + + +S +L+ F+E
Sbjct: 813 QGIGFLNDSRRLNVALTRAKYGVIIIGNAKILSRHPLWNQLLTMFKE 859
>gi|213408485|ref|XP_002175013.1| ATP-dependent helicase NAM7 [Schizosaccharomyces japonicus yFS275]
gi|212003060|gb|EEB08720.1| ATP-dependent helicase NAM7 [Schizosaccharomyces japonicus yFS275]
Length = 926
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 162/535 (30%), Positives = 261/535 (48%), Gaps = 59/535 (11%)
Query: 127 DDIPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLI--PVLFGEQKPTVL 184
D IP E ++ ++ + ++ RM+ AL S N +G + +L E P L
Sbjct: 323 DKIPIECTHN-FSVDYVWKSTSFDRMQAAL--KSFATDNSRLSGYLYHKLLGHEVPPLTL 379
Query: 185 KKDIAFK---PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIIL----QEV 237
K + P L+ SQ +A+ L+ + + ++ GPPGTGKT T I+ Q
Sbjct: 380 KTKLPTTFSVPNLPELNSSQVNAVRSVLT-QPLSLIQGPPGTGKTVTSASIVYHLATQTK 438
Query: 238 KRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSL 297
GS +L CA SN+AVD + E++ +R+VR+ +R +D+ V S
Sbjct: 439 GNGSAVLVCAPSNVAVDQLAEKIHQTGLRVVRVTAKSR-------EDIDSPV------SF 485
Query: 298 ASDIRKEMKALNG-----KLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDV----IK 348
S + +++K G +LLK +Q ++ LS + KR ++ V + ++
Sbjct: 486 LS-LHEQVKNYEGNEEFSRLLK---------LQNDVGELSLADEKRLRVLVASIERELLQ 535
Query: 349 NADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLK-GSRCILAGDHLQLPP 407
+A+V+ T GA +++ F V+IDEA QA E C I L + +L GDH QL P
Sbjct: 536 SANVICCTCVGAGDKRVSKLRFRAVLIDEATQASEPECMIPLTHVYKQVVLVGDHQQLGP 595
Query: 408 TVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPS 467
V + +A + GL ++LFERL L + LTVQYRMH + + S Y ++ +
Sbjct: 596 VVMNKKAAQAGLSQSLFERLIILGNSPIR--LTVQYRMHPCLSEFPSNMFYEGTLQNGVT 653
Query: 468 GVKRTS------STEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVH 521
+R + +P L+ A EE S +N EA + ++GV
Sbjct: 654 TAERLARYLDFPWPQPEEPLMFYANFGQEEISASGTSYLNRTEASTCEKIVTQFFKAGVT 713
Query: 522 ASDIGIITPYAAQ-VVLLKILRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNS 576
IGIITPY Q +++ +++ K D K +EV++VD FQGREK+ II+S VRS+
Sbjct: 714 PEQIGIITPYDGQRSYIVQYMQNNGALKKDLYKAVEVASVDAFQGREKDFIILSCVRSSE 773
Query: 577 KKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+ +GFLS+ RR+NVA+TRAR ++ + + ++ I + E + G
Sbjct: 774 HQGIGFLSEPRRLNVALTRARYGVIVLGNPKVLAKHALWYHFIVHCRERGYLVEG 828
>gi|294655237|ref|XP_002770105.1| DEHA2B08822p [Debaryomyces hansenii CBS767]
gi|199429794|emb|CAR65475.1| DEHA2B08822p [Debaryomyces hansenii CBS767]
Length = 1968
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 163/519 (31%), Positives = 255/519 (49%), Gaps = 106/519 (20%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR---------------- 239
+++ SQ AI + +S ++ GPPGTGKT T++ I+ +
Sbjct: 1308 DVNRSQAKAIMGSYNSDGFSLIQGPPGTGKTKTILGIVGYSISHQQKEGTIIIPKGIADN 1367
Query: 240 -----------GSKILACAASNIAVDNIVERL------------VPHRVRLVRLGHPARL 276
G KIL CA SN AVD +V RL +P R+VRLG +
Sbjct: 1368 NPLAGSKGESNGPKILICAPSNAAVDELVLRLRKGVKTSKGESIIP---RVVRLGRSDAI 1424
Query: 277 LPQV----LESALDAQV------------LRGDNSSLASD---IRKEMKA--LNGKLLKT 315
V LE +D Q+ +R +++ ++ +R+E++ LN + +K
Sbjct: 1425 NAAVKDLTLEELVDKQLQVQSVNTTSDPKIRMEHTKCIAERDRLREELRKPNLNEEEIKV 1484
Query: 316 -----KDKN-TRREIQKELRTLSKEERKRQQLAV-----------TDVIKNADVVLTTLT 358
+D N +R E+ K+L E+R+R +A ++ ++ ++ +TL+
Sbjct: 1485 LEIQLRDTNKSRNELAKKL----DEQRERISIAYRTKEIERRQLQAKILNSSQIICSTLS 1540
Query: 359 GAVSRKLDNTS--FDLVIIDEAAQALEIACWIALLKGS-RCILAGDHLQLPPTVQSVEAE 415
G+ L N S FD VIIDEA Q++E++ I L G +CI+ GD QLPPTV S A
Sbjct: 1541 GSAHDFLANMSMKFDQVIIDEACQSVELSAIIPLRYGCKKCIMVGDPNQLPPTVLSQAAA 1600
Query: 416 KKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST 475
++LF R+ +Y + V +L VQYRMH I + S + Y S++ H ++
Sbjct: 1601 SFNYEQSLFVRMQKMYPESVY-LLDVQYRMHPAISKFPSSEFYFSRL--HDGEGMAAKNS 1657
Query: 476 EPT--------LLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQ---SGVHASD 524
P + DI G ++ + S N EA+VA+ +LIQ +
Sbjct: 1658 RPWHKDYPLSPYMFFDIVG--KHQQNELSRSLFNYAEAQVALELVDKLIQILPQTEFSGR 1715
Query: 525 IGIITPYAAQVVLLK-ILRSK--DDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVG 581
IGII+PY Q+ LK + + K L ++ +TVDGFQG+EKE II+S VR++ VG
Sbjct: 1716 IGIISPYKEQIRTLKDVFKRKYGHSILSEIDFNTVDGFQGQEKEIIIMSCVRASESGNVG 1775
Query: 582 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 620
FLSD RRMNVA+TRAR ++ + +++S + KRL++
Sbjct: 1776 FLSDVRRMNVALTRARTSLWILGNKKSLSRNTVWKRLLD 1814
>gi|403215170|emb|CCK69670.1| hypothetical protein KNAG_0C05720 [Kazachstania naganishii CBS
8797]
Length = 1000
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 167/548 (30%), Positives = 273/548 (49%), Gaps = 47/548 (8%)
Query: 110 GQGVVYRLKDS---SITVAFDD---IPEEGLNSPLRLEKLANEVTYRRMKDALIQLSKGV 163
G+G + RL +S + T+ P L + E + +Y RM+DAL + + V
Sbjct: 342 GRGYIVRLPNSYQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFA--V 399
Query: 164 QNGPAAGLIPV-LFGEQKPTV-----LKKDIAFKPFNSNLDHSQKDAISKALSSKNVFML 217
+G + + G + V L K+ + F ++L+ SQ +A+ L + + ++
Sbjct: 400 DKKSISGFLYYKILGHEVVDVSFDVPLPKEFSISHF-AHLNASQSNAVKHVLE-RPLSLI 457
Query: 218 HGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARL 276
GPPGTGKT T I+ K +IL CA SN+AVD++ +L +++VRL +R
Sbjct: 458 QGPPGTGKTVTSATIVYHLAKIHKDRILVCAPSNVAVDHLASKLRDLGLKVVRLTAKSR- 516
Query: 277 LPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEER 336
+ +ES++ L + + K++ L ++ + TRR +
Sbjct: 517 --EDVESSVSDLALHNLVAKSSQGELKKLLKLKDEVGELSAVGTRRFV------------ 562
Query: 337 KRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR- 395
K + A +++ ADVV T GA ++LD T F V+IDE+ QA E C I ++KG++
Sbjct: 563 KLVKKAELEILAKADVVCCTCVGAGDKRLD-TRFRTVLIDESTQATEPECLIPIVKGAKQ 621
Query: 396 CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSK 455
IL GDH QL P + +A GL ++LFERL L V L VQYRM+ H+ + S
Sbjct: 622 VILVGDHQQLGPVILERKAADAGLKQSLFERLISL--GHVPIRLEVQYRMNPHLSEFPSN 679
Query: 456 QLYNSKIKAHPSGVKRT--SSTEPTLL----LIDIAGCDMEEKKDEEDSTMNEGEAEVAM 509
Y ++ + +RT +ST P + ++ A EE S +N EA
Sbjct: 680 MFYEGTLQNGVTIEQRTVLNSTFPWPIHGVPMMFWANYGREEISGNGTSYLNRIEAMNCE 739
Query: 510 AHAKRLIQSGVHASDIGIITPYAAQ-VVLLKILRSKDDKLKNM----EVSTVDGFQGREK 564
+L + GV IG+ITPY Q +L+ ++ K++ EV++VD FQGREK
Sbjct: 740 RIITKLFRDGVKPEQIGVITPYEGQRAYVLQYMQMNGAMDKSLYLKVEVASVDAFQGREK 799
Query: 565 EAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
+ II+S VR+N ++ +GFL D RR+NV +TRA+ ++ + ++S + L+ +F E
Sbjct: 800 DYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLSRNLLWNHLLVHFRE 859
Query: 625 HAEYLSGS 632
+ G+
Sbjct: 860 KGCLVEGA 867
>gi|344301279|gb|EGW31591.1| hypothetical protein SPAPADRAFT_51586 [Spathaspora passalidarum NRRL
Y-27907]
Length = 1937
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 162/499 (32%), Positives = 248/499 (49%), Gaps = 77/499 (15%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR---------------- 239
NL+ SQ AI S+ ++ GPPGTGKT T++ I+ + +
Sbjct: 1264 NLNVSQAKAILGTHQSEGFSLIQGPPGTGKTKTILGIVGYSLSQKDEKILDIPGHTPTTD 1323
Query: 240 GSKILACAASNIAVDNIVERLV---------PHRVRLVRLGHPARLLPQV----LESALD 286
+KIL CA SN AVD +V RL +++VRLG + V LE +D
Sbjct: 1324 PAKILICAPSNAAVDELVLRLRDGVKNSSGETMNLKVVRLGRSDAINASVRDLTLEELVD 1383
Query: 287 AQV-LRGDNSSLASDIRK-------EMKALNGKLL-KTKDKNTRREIQKELRTLSK---- 333
++ + + ++ IR+ E AL +L+ ++ + +++ LRT++K
Sbjct: 1384 KELQTKAVDVNIDPTIRQQHSKCIEERDALRARLVNESLSEKEMTDLEDRLRTVNKKRSE 1443
Query: 334 ------EERKRQQLAV-----------TDVIKNADVVLTTLTGAVSRKLDNTS--FDLVI 374
E+R+R +A ++ A V+ +TL+G+ L + S FD VI
Sbjct: 1444 LAKRLDEQRERASIAYRTKEIERRNAQARILSQAQVICSTLSGSAHDFLASLSLKFDKVI 1503
Query: 375 IDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGD 433
+DEA Q +E++ I L G R CI+ GD QLPPTV S A ++LF R+ + D
Sbjct: 1504 VDEACQCVELSAIIPLRYGCRTCIMVGDPNQLPPTVLSQAAASYNYEQSLFVRMQKNHPD 1563
Query: 434 EVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK---RTSSTEPTLL---LIDIAGC 487
V +L VQYRMH I + S + YNSK+K ++ R +P L DI
Sbjct: 1564 SVY-LLDVQYRMHPQISQFPSAEFYNSKLKDGEGMLEKNDRPWHKDPPLTPYRFFDIVS- 1621
Query: 488 DMEEKKDEEDSTMNEGEAEVAMAHAKRL---IQSGVHASDIGIITPYAAQVVLLK---IL 541
E+ D+ S N EA VA+ ++L + IGII+PY Q+ +K I
Sbjct: 1622 -KHERDDQSRSLFNVEEARVALELVQKLMTILPQDKFRGRIGIISPYKEQIRSIKNEFIR 1680
Query: 542 RSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCC 601
R +++ +TVDGFQG+EKE II+S VR++ VGFLSD RRMNVA+TRAR
Sbjct: 1681 RYGRAIQDDIDFNTVDGFQGQEKEIIIMSCVRASPSGNVGFLSDVRRMNVALTRARTTLW 1740
Query: 602 LVCDTETVSSDGFLKRLIE 620
++ + +++S + +RL+E
Sbjct: 1741 ILGNKDSLSRNNVWRRLLE 1759
>gi|401826435|ref|XP_003887311.1| putative DNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392998470|gb|AFM98330.1| putative DNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 556
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 140/440 (31%), Positives = 228/440 (51%), Gaps = 70/440 (15%)
Query: 193 FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIA 252
++++L+ SQK A+ + + + + GPPGTGKT TVVEII Q + +++L C SN++
Sbjct: 165 YDTSLNESQKRAV-ETIGLNVPYKILGPPGTGKTRTVVEIISQLLTAKNRVLVCGPSNVS 223
Query: 253 VDNIVERLVPHRVRL------VRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMK 306
VDNI+ER + + L RLG + L + LD SLA K MK
Sbjct: 224 VDNIIERFLKSKYFLHNAPSFYRLGSSLKGLSHL---NLD---------SLAKSHTKFMK 271
Query: 307 ALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLD 366
+ D+N R+ +++ + KE++ ++ VV TL ++ +
Sbjct: 272 E------EKNDRNFYRDRKEKQKEFMKEKQT-----------SSSVVFATLFSSLKER-- 312
Query: 367 NTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFER 426
T FD V+IDEA QA E+ ++A++KG IL GD +QL P S L+E
Sbjct: 313 -TRFDWVLIDEACQASEVESFLAVVKGKMFILIGDPMQLCPETSS-----------LYET 360
Query: 427 LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIAG 486
LA +L QYRM +M +S+ Y +IK+ K T P +L +D
Sbjct: 361 LA-----LPVVLLNEQYRMPSGLMRFSNDMFYRGEIKSATREHKATFGESP-ILFVDTQY 414
Query: 487 CDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSKDD 546
++ E D S N GEA + + I + ++GII PY +QV+LL+
Sbjct: 415 FELYESNDVSKS--NVGEAMIVKS-----IVEILKGEEVGIIAPYTSQVLLLQ------- 460
Query: 547 KLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 606
++ ++EVSTVDGFQG+E++ II+++VR N ++E GFL + +R+NVA+TR ++ +V D+
Sbjct: 461 EIVDVEVSTVDGFQGQERDYIILTLVRCNDREEFGFLDNEKRLNVALTRCKKGLVIVGDS 520
Query: 607 ETVSSDGFLKRLIEYFEEHA 626
T ++L ++ + ++
Sbjct: 521 RTFRRSDIFQKLFKFLKANS 540
>gi|345567573|gb|EGX50503.1| hypothetical protein AOL_s00075g232 [Arthrobotrys oligospora ATCC
24927]
Length = 1147
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 146/455 (32%), Positives = 239/455 (52%), Gaps = 44/455 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+ SQ A+ K++ K + ++ GPPGTGKT T I+ K GS++L CA SN+AVD
Sbjct: 450 LNISQVCAV-KSVLQKPLSLIQGPPGTGKTVTSATIVYHLAKLSGSQVLVCAPSNVAVDQ 508
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKT 315
+ E++ +++VRL +R +++QV S L+ + + N +L+K
Sbjct: 509 LTEKIHRTSLKVVRLTAKSR-------EDVESQV-----SFLSLHEQVRINNTNVELVKL 556
Query: 316 KDKNTRREIQKELRTLS-KEERKRQQL---AVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
R+++ EL LS ++E+K + L A +++ NADV+ T GA +L F
Sbjct: 557 ------RQLKDELGELSLQDEKKFKHLTRAAEKEILTNADVICCTCVGAGDPRLAKFKFR 610
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ Q+ E C I L+ G + +L GDH QL P + + +A + GL ++LFERL L
Sbjct: 611 TVLIDESTQSAEPECMIPLVLGCKQLVLVGDHQQLGPVIMNKKAARAGLHQSLFERLVIL 670
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSST---------EPTLLL 481
+ L VQYRMH + + S Y ++ + +R P +
Sbjct: 671 GCAPIR--LNVQYRMHPCLSEFPSNMFYEGSLQNGVTVQERLRRNVDFPWPVVDSPMMFW 728
Query: 482 IDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-VVLLKI 540
++ EE S +N EA + ++GV S IGIITPY Q ++
Sbjct: 729 SNLGN---EEISASGTSYLNRTEAAACEKIISKFFKAGVSPSQIGIITPYEGQRSYIVSS 785
Query: 541 LRS----KDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRA 596
+++ K + K++EV++VD FQGREK+ I++S VRSN + +GFL+D RR+NVA+TRA
Sbjct: 786 MQTNGSHKKELYKDIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLNDPRRLNVALTRA 845
Query: 597 RRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+ ++ + + +S L+ +++EH + G
Sbjct: 846 KYGVVILGNPKVLSKHPLWHHLLLHYKEHNCLVEG 880
>gi|344301641|gb|EGW31946.1| ATP-dependent helicase NAM7 [Spathaspora passalidarum NRRL Y-27907]
Length = 1000
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 163/557 (29%), Positives = 260/557 (46%), Gaps = 58/557 (10%)
Query: 107 PALGQGVVYRLKDSS---ITVAFDD---IPEEGLNSPLRLEKLANEVTYRRMKDALIQLS 160
P G G + RL + + T+ + P L + E + +Y RM+ A+ +
Sbjct: 342 PWEGNGYILRLPNKNQEEFTLELNPSKVTPPTDLTTDFTAEFVWKGTSYDRMQQAMKDFA 401
Query: 161 KGVQNGPAA--------GLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSK 212
+ + ++P+ F + P P + L+ SQ +A+ L +
Sbjct: 402 TDETSVSSYIYHKLLGHEVVPIEFDTELPQRFSH-----PALTELNVSQTNAVRTVLQ-R 455
Query: 213 NVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDNIVERLVPHRVRLVRLG 271
+ ++ GPPGTGKT T II K KIL CA SN+AVD++ E+L +++VRL
Sbjct: 456 PLSLIQGPPGTGKTVTSATIIYHLSKLNKEKILVCAPSNVAVDHLAEKLDLLGLKVVRLT 515
Query: 272 HPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKE---L 328
+R +D+ V + +L + + K K KL+K K++ ++
Sbjct: 516 AKSR-------EDVDSSV---SHLALHNLVNKGAKGEFKKLIKLKNEVGELSVEDSRIYF 565
Query: 329 RTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWI 388
R L E K ++ D+V T GA ++L F V+IDE+ QA E I
Sbjct: 566 RNLRNSESK--------LLDKCDIVCCTCVGAADKRLSQFKFRTVLIDESTQASEPEVLI 617
Query: 389 ALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHE 447
++KG++ IL GDH QL P + +A GL ++LFERL ++ V L VQYRMH
Sbjct: 618 PIVKGAKQVILVGDHQQLGPVILDRKAADAGLKQSLFERL--VFLGHVPIRLEVQYRMHP 675
Query: 448 HIMNWSSKQLYNSKIKAHPSGVKR--TSSTEPTLL----LIDIAGCDMEEKKDEEDSTMN 501
+ ++ S Y ++ + R +T P + ++ A EE +S +N
Sbjct: 676 CLSDFPSNMFYEGSLQNGVTSDDRLIEDATFPWPMVDTPMMFWANYGREELSSSGNSFLN 735
Query: 502 EGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL-------KILRSKDDKLKNMEVS 554
EA RL + GV IG+ITPY Q L L K D+ ++E++
Sbjct: 736 RVEAMNVEKIITRLFKDGVTPDQIGVITPYEGQRAYLVQFMSMNSTLLDKRDQYLDVEIT 795
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGF 614
+VD FQGREK+ II+S VR+N + +GFLSD RR+NVA+TRA+ ++ + + +
Sbjct: 796 SVDAFQGREKDFIILSCVRANDAQSIGFLSDPRRLNVALTRAKYGLIVLGNPRALCRNRL 855
Query: 615 LKRLIEYFEEHAEYLSG 631
L+ +F E + G
Sbjct: 856 WNCLLVHFREKGCLVDG 872
>gi|15790999|ref|NP_280823.1| DNA-binding protein -like [Halobacterium sp. NRC-1]
gi|169236747|ref|YP_001689947.1| DNA helicase (enhancer-binding protein homolog) [Halobacterium
salinarum R1]
gi|10581584|gb|AAG20303.1| DNA binding protein eukaryotic-like [Halobacterium sp. NRC-1]
gi|167727813|emb|CAP14601.1| probable DNA helicase (homolog to enhancer-binding protein)
[Halobacterium salinarum R1]
Length = 751
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 156/486 (32%), Positives = 233/486 (47%), Gaps = 74/486 (15%)
Query: 137 PLRLEKLANEVTYRRMKDALIQLSKGVQNGPA-----AGLIPVLFGEQKPTVLKKDIAFK 191
P L L N V Y R DA+ V PA G P+ F + P D+A
Sbjct: 293 PFWLRGLLNPVPYTRRLDAI----DAVWETPAKRRLLTGQRPLSF-SRPPNRRHADLA-- 345
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNI 251
LD Q+ A++ A+++ +V +HGPPGTGKT T+ ++ + V RG ++L A SN
Sbjct: 346 -----LDDHQQRALAWAVAADDVACIHGPPGTGKTRTLAAVVAESVARGERVLVTAHSNQ 400
Query: 252 AVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGK 311
AVD ++ V +S LDA D+ SL +G
Sbjct: 401 AVDTLL----------------------VGDSTLDA----ADDGSL-----------HGV 423
Query: 312 LLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
L + R + R ++ RQ+ + ADVV T GA + D +FD
Sbjct: 424 LGDDPTVDIARH-GRHSRNRVVDDHYRQR-----GVDAADVVAATTNGAAT--FDQNAFD 475
Query: 372 LVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGR-TLFERLADL 430
L ++DEA QA A IA+ +LAGDH QLPP V G R +LFE L D
Sbjct: 476 LAVVDEATQASRAATAIAVNAADTLVLAGDHRQLPP--YGVREGGAGEMRPSLFETLIDR 533
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDME 490
YGD+V +L QYRMH+ I + ++ Y +++ R P + ++D+AG +
Sbjct: 534 YGDDVAVLLARQYRMHDAIAGFPNEAFYGGRLETAAVAADRAVDGLPPVAVVDVAG---Q 590
Query: 491 EKKDEEDSTM-NEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK-ILRSKDDKL 548
E++DE +++ N EA V + ++GV D+G+I Y+ V ++ +L +
Sbjct: 591 ERRDERGASVRNAAEASVVADRVDTIRRAGVEPGDLGVIAAYSDHVSAIRGVLADRGLDR 650
Query: 549 KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFL----SDRRRMNVAVTRARRQCCLVC 604
+ V TVD FQG E++A+++S RSN + GFL + RR+NVA+TRARR LV
Sbjct: 651 PALTVDTVDSFQGGERDAVVVSFARSNDAHDAGFLEHPAAGPRRLNVALTRARRHLSLVG 710
Query: 605 DTETVS 610
D T++
Sbjct: 711 DWATLT 716
>gi|46133873|ref|XP_389252.1| hypothetical protein FG09076.1 [Gibberella zeae PH-1]
Length = 1721
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 162/489 (33%), Positives = 234/489 (47%), Gaps = 77/489 (15%)
Query: 140 LEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDH 199
LE VT + M DA+ L N G+ ++FG + T L + A L+
Sbjct: 1226 LEDCGPFVTCKSMTDAVKDLCIYRDN--CCGVADIVFGLESATFLPRSEATCSKIDKLNE 1283
Query: 200 SQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII--LQEVKRGSKILACAASNIAVDNIV 257
SQ AI AL S ++ L GPPGTGKT T+VE+I LQ +++L A ++ AVDN++
Sbjct: 1284 SQNKAIQLALES-SLLCLWGPPGTGKTETIVEMICALQIANEKARVLVTAPTHNAVDNVM 1342
Query: 258 ERLVPHRVRLVRLGHPARLLPQVLESALDAQVLR--GDNSSLASDIRKEMKALNGKLLKT 315
R + ++ Q L + VLR + ++ D+RK T
Sbjct: 1343 RRYI------------KQIQEQPLARKVQPNVLRVSTEVHKVSDDLRK----------YT 1380
Query: 316 KDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVII 375
D +EI + + + K T +IK++D V TT GA L + FD+VI+
Sbjct: 1381 CDAMAGQEIHGDYKAMKK---------ATQMIKDSDTVFTTCIGAGIGLLRSEFFDIVIV 1431
Query: 376 DEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDE 434
DEA+Q E + + L+KG S+ IL GDH+QL PTVQ +LFERL G
Sbjct: 1432 DEASQQTEPSSLVPLVKGCSKAILVGDHVQLRPTVQQTSLALD-FDVSLFERLYTEAGGS 1490
Query: 435 V-----TSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK-------RTSSTEPTLLLI 482
T ML QYRMH + +SS Y K+K SG+ ++ P +L
Sbjct: 1491 TESGFNTMMLDTQYRMHPKLCEFSSGAFYEGKLK---SGIGISDRPLIKSEFPFPLAVLT 1547
Query: 483 DIAG--------------CDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGII 528
+G CD +E + + S N+G+AE+ + H +L+ S I ++
Sbjct: 1548 KQSGDSGKTDYERAIFVNCDTKEIQGK--SKENKGQAELCL-HICKLLTSQNDTQSIVVL 1604
Query: 529 TPYAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 588
TPY Q LK + +EVS++DGFQGRE + I+ VR N + +GFL D RR
Sbjct: 1605 TPYTRQAESLKRMLPS-----TIEVSSIDGFQGREADVIVFVTVRCNEHRSIGFLKDMRR 1659
Query: 589 MNVAVTRAR 597
MNVA+TRAR
Sbjct: 1660 MNVALTRAR 1668
>gi|195396575|ref|XP_002056906.1| GJ16782 [Drosophila virilis]
gi|194146673|gb|EDW62392.1| GJ16782 [Drosophila virilis]
Length = 1219
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/485 (30%), Positives = 240/485 (49%), Gaps = 34/485 (7%)
Query: 160 SKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHG 219
S+ + +G A G VLF +P + P +L+ SQ A+ AL + + ++ G
Sbjct: 430 SRLLGHGRADGSDEVLFRGPQPKLYSA-----PHLPDLNRSQVYAVKHALQ-RPLSLIQG 483
Query: 220 PPGTGKTTTVVEIILQEVKR-GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLP 278
PPGTGKT T I+ Q VK+ +L CA SN AVD + E++ +++VR+ +R
Sbjct: 484 PPGTGKTVTSATIVYQLVKQHAGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSR--- 540
Query: 279 QVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKR 338
+ ++S + L ++ ++ E+K KL + KD+ E R S +
Sbjct: 541 EAIDSPVSFLALHNQIRNMETN--SELK----KLQQLKDETGELSSADEKRYRSLKRGTE 594
Query: 339 QQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CI 397
QL ++ ADV+ T GA +L F ++IDE+ Q+ E C + ++ G++ I
Sbjct: 595 NQL-----LEAADVICCTCVGAGDVRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLI 649
Query: 398 LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQL 457
L GDH QL P V +A + GL ++LFERL L L VQYRMH + + S
Sbjct: 650 LVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR--LEVQYRMHPELSQFPSNFF 707
Query: 458 YNSKIKAHPSGVKR-----TSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHA 512
Y ++ R +P + + EE S +N EA
Sbjct: 708 YEGSLQNGVCAEDRRLKLDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKIT 767
Query: 513 KRLIQSGVHASDIGIITPYAAQ----VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAI 567
R +++G+ IGIITPY Q V ++ S +L + +E+++VD FQGREK+ I
Sbjct: 768 TRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDII 827
Query: 568 IISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAE 627
I+S VRSN ++ +GFL+D RR+NVA+TRA+ +V + + ++ L+ ++++
Sbjct: 828 IMSCVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLLNFYKDRKV 887
Query: 628 YLSGS 632
+ GS
Sbjct: 888 LVEGS 892
>gi|291243686|ref|XP_002741733.1| PREDICTED: regulator of nonsense transcripts 1-like, partial
[Saccoglossus kowalevskii]
Length = 974
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 141/452 (31%), Positives = 225/452 (49%), Gaps = 38/452 (8%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDN 255
L+HSQ A+ L + + ++ GPPGTGKT T ++ K+ ++L CA SNIAVD
Sbjct: 317 LNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATVVYHLSKQNLGQVLVCAPSNIAVDQ 375
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALDAQV--LRGDNSSLASDIRKEMKALNGKLL 313
+ E++ +++VRL +R A+D+ V L N D E++ L + L
Sbjct: 376 LTEKIHRTGLKVVRLCAKSR-------EAIDSPVSFLALHNQVRNMDAIPELQKL--QQL 426
Query: 314 KTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLV 373
K + +K R+L + + ++++NADV+ T GA +L F +
Sbjct: 427 KDETGELSSADEKRYRSLKRNCER-------ELLQNADVLCCTCVGAGDPRLARFRFRSI 479
Query: 374 IIDEAAQALEIACWI-ALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG 432
+IDE+ QA E C I A+L + IL GDH QL P V +A + GL ++LFERL L
Sbjct: 480 LIDESTQATEPECMIPAVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI 539
Query: 433 DEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS--------STEPTLLLIDI 484
+ L VQYRMH + ++ S Y ++ + +R++ T+ +L
Sbjct: 540 RPIR--LQVQYRMHPILSSFPSNIFYEGSLQNGVTPGERSNKSLDFPWPQTDKPMLFYAT 597
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLKILRSK 544
G EE S +N EA R ++ G+ IGIITPY Q +
Sbjct: 598 TG--QEEIASSGTSYLNRTEAANVEKITTRFLRCGIRPEQIGIITPYEGQRSFIVQYMQH 655
Query: 545 DDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 599
+ L + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TR +
Sbjct: 656 NGSLHAKLYQEIEIASVDAFQGREKDYIILSCVRANEHQGIGFLNDPRRLNVALTRCKFG 715
Query: 600 CCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+V + + +S L+ +++E + G
Sbjct: 716 IIIVGNPKVLSKQALWNHLLNHYKEQKVLVEG 747
>gi|294936357|ref|XP_002781732.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239892654|gb|EER13527.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 503
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 146/456 (32%), Positives = 226/456 (49%), Gaps = 45/456 (9%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV-----KRG-SKILACAASN 250
L +Q +AI + + + ++ GPPGTGKT T V ++ V RG K+L A SN
Sbjct: 68 LTEAQLNAIRSSWETP-ITLIQGPPGTGKTHTAVALVKHWVVNKITARGEGKVLVVADSN 126
Query: 251 IAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG 310
A DNI +V + R+G AQ G ++ D+ ++++
Sbjct: 127 AAADNIRGLMVKAGIECYRVGR--------------AQETDGGTREVSDDVLRKLEGTRA 172
Query: 311 KLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF 370
++ RR + L + K RQ++ + V++ T G+ + LD+ F
Sbjct: 173 V------RDYRRAVI--LGDIHKLPYFRQRIDKA-AVDEYQVLVATCIGSGHQLLDSVDF 223
Query: 371 DLVIIDEAAQALEIACWIALLKGS-RCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLAD 429
+ VIIDE QA E A + L +G+ RC+L GDH QLP TV A+ GLG +LFERLA
Sbjct: 224 ESVIIDECTQATEPASLVPLARGAKRCVLLGDHKQLPATVHCNTAKSGGLGISLFERLA- 282
Query: 430 LYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK-----RTSSTEPTLLLIDI 484
+ G V +L +Q RMH I +S+ Y+++IK S R + + + L+D
Sbjct: 283 MSGTPV-HLLDIQRRMHPSIAEFSNHHFYDNRIKHEVSDRPLIPGLRWPNPQIRVALVDT 341
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ-----VVLLK 539
+ E K S MN EA + + + +G IG++ PY AQ L +
Sbjct: 342 SQLIAGESK-VGTSLMNREEARLLLDALYDAVANGTPPGQIGLVVPYNAQKSHVIAALKE 400
Query: 540 ILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQ 599
R ++ ++++TVDGFQG EKE I S VRSN +VGF++D RRMNV +TRARR
Sbjct: 401 DTRFSPEQRAAVQINTVDGFQGHEKELIFFSAVRSNVSGQVGFIADPRRMNVMLTRARRG 460
Query: 600 CCLVCDTETVS-SDGFLKRLIEYFEEHAEYLSGSEY 634
+ CD T++ S G + +E+ E ++ +++
Sbjct: 461 LVVFCDVNTMTASGGHWRSWVEWIERKGGIITAADW 496
>gi|241953325|ref|XP_002419384.1| helicase, putative; tRNA-splicing endonuclease positive effector,
putative [Candida dubliniensis CD36]
gi|223642724|emb|CAX42978.1| helicase, putative [Candida dubliniensis CD36]
Length = 2009
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 170/508 (33%), Positives = 249/508 (49%), Gaps = 93/508 (18%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII---LQEVKR---------GS-- 241
+++ SQ AI S+ ++ GPPGTGKT T++ I+ L + K GS
Sbjct: 1297 HVNDSQARAIMGTFKSEGFSLIQGPPGTGKTKTILGIVGYSLSQEKNKKVIDISESGSSP 1356
Query: 242 ------KILACAASNIAVDNIVERL-----------VPHRVRLVRLGHPARLLPQVLESA 284
KIL CA SN AVD +V RL +P +++VRLG + V +
Sbjct: 1357 APSDKAKILICAPSNAAVDELVLRLRDGVRNSSGEHMP--LKVVRLGRSDAINSSVRDLT 1414
Query: 285 LDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEE--------- 335
L+ V + L + + + N +L TK N R E++K L T S E+
Sbjct: 1415 LEELV----DKELQTKQTEVVIDPNIRLEHTKCINERDELRKRLATESLEDKDITELEEK 1470
Query: 336 -----RKRQQLA------------------------VTDVIKNADVVLTTLTGAVSRKLD 366
+KR +LA ++ A V+ +TL+G+ +
Sbjct: 1471 IRAINKKRSELAKKLDEQREKASIANRTKEINRRNIQARILSEAQVLCSTLSGSAHDLVA 1530
Query: 367 NTS--FDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTL 423
N S FD VIIDEA Q LE++ I L G R CI+ GD QLPPTV S A ++L
Sbjct: 1531 NLSVQFDQVIIDEACQCLELSAIIPLRYGCRKCIMVGDPNQLPPTVLSQAAASYNYEQSL 1590
Query: 424 FERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVK---RTSSTEPTLL 480
F R+ + D V ML VQYRMH I + S + YNSK+K + ++ R +P L
Sbjct: 1591 FVRMQKNHPDSVY-MLDVQYRMHPMISKFPSSEFYNSKLKDGDNMLELNTRPWHKDPPLT 1649
Query: 481 ---LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQ---SGVHASDIGIITPYAAQ 534
DI G EK + S N EA VA+ +L+Q + ++GII+PY Q
Sbjct: 1650 PYRFFDILG--KHEKNELTRSLFNTDEAMVALQLTDKLMQIIPQDKFSGNVGIISPYKEQ 1707
Query: 535 VVLLK-ILRSKDDK--LKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNV 591
+ +K + K K L ++ +TVDGFQG+EKE II+S VR+++ VGFLSD RRMNV
Sbjct: 1708 IRKIKEVFVRKYGKPILDEIDFNTVDGFQGQEKEIIIMSCVRASATGNVGFLSDVRRMNV 1767
Query: 592 AVTRARRQCCLVCDTETVSSDGFLKRLI 619
A+TRA+ ++ + E++S + ++L+
Sbjct: 1768 ALTRAKTTLWILGNKESLSRNEVWRKLL 1795
>gi|164658495|ref|XP_001730373.1| hypothetical protein MGL_2755 [Malassezia globosa CBS 7966]
gi|159104268|gb|EDP43159.1| hypothetical protein MGL_2755 [Malassezia globosa CBS 7966]
Length = 1900
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 155/501 (30%), Positives = 238/501 (47%), Gaps = 85/501 (16%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR----------------- 239
L+ Q A+ + + ++ GPPGTGKT T+ ++ + R
Sbjct: 1152 LNEPQARAVVATMRTPGFSLIQGPPGTGKTKTIRALVASFLSRRAGTSVGPKKAAAPARD 1211
Query: 240 --GSKILACAASNIAVDNIVERL-----------VPHRVRLVRLGHPARLLPQVLESALD 286
+++L CA SN A+D +V R+ VP RLVRLG + P V + LD
Sbjct: 1212 GPSARMLLCAPSNAAIDELVSRIKDGVDIDGKRVVP---RLVRLGRDEAVNPAVRDVTLD 1268
Query: 287 AQVLRGDNSSLAS---------------DIRKEM----------------KALNGKLLKT 315
A + A+ D R E+ +AL +L +
Sbjct: 1269 ALAEHAGSKDTAASRAAEELQRVERAWRDKRAELEQSASAPTSSTSRERTRALQAELNEL 1328
Query: 316 KDKNTRREIQKELRTL-------SKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNT 368
DK R E+++++ +L S + +A ++ A++V TL GA L
Sbjct: 1329 TDK--RFELREQVSSLQSRSKMGSMRPETERHMARMSILDEAEIVCATLAGAGHEMLYRY 1386
Query: 369 SFDLVIIDEAAQALEIACWIAL-LKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERL 427
+FD V+IDEAAQA+E++ I L + +RCIL GD QLPPTV S EAE++ ++LF R+
Sbjct: 1387 TFDTVVIDEAAQAVELSTLIPLRYECTRCILVGDPKQLPPTVLSQEAERRQYAQSLFVRM 1446
Query: 428 ADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLID---I 484
+ D V +L++QYRMH I + S Y ++ P +T L
Sbjct: 1447 FNASPDRV-HLLSIQYRMHPDISLFPSTAFYGRQLIDGPQMASKTLQPWHNTQLFGPFRF 1505
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLI---QSGVHASDIGIITPYAAQVVLLKIL 541
D E+ S N+ EA AM + L Q+ + +G ++ Y AQV LL+ L
Sbjct: 1506 FHVDALEEPGRSHSIQNQSEAYTAMQVYEALCACAQTSLRGR-VGFVSMYKAQVDLLRTL 1564
Query: 542 R-SKDDKLKNMEV--STVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARR 598
S+ + M+V S+VDGFQG+EK+ II+S VRSN + +GFLSD RR+NVA+TRAR
Sbjct: 1565 FVSQYGRAAAMDVDFSSVDGFQGQEKDIIILSCVRSNKDRVMGFLSDHRRLNVALTRARS 1624
Query: 599 QCCLVCDTETVSSDGFLKRLI 619
++ + + +D + +I
Sbjct: 1625 NMIVIGNASMLGNDTIWRDMI 1645
>gi|344211383|ref|YP_004795703.1| putative DNA helicase [Haloarcula hispanica ATCC 33960]
gi|343782738|gb|AEM56715.1| DNA binding protein-like / putative DNA helicase (enhancer-binding
protein-like protein) [Haloarcula hispanica ATCC 33960]
Length = 741
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 160/505 (31%), Positives = 237/505 (46%), Gaps = 66/505 (13%)
Query: 140 LEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNSNLDH 199
L L N V + R ++A+ LS AG P+ F + F++ L+
Sbjct: 288 LTALLNPVPFDREREAVEALSDHRFRDVLAGDRPITFSNGAAARSDQ------FDAELNQ 341
Query: 200 SQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVER 259
Q+ A+ AL + ++F +HGPPGTGKT T+VEI+ + + G +L CA SN A V+
Sbjct: 342 EQQLAVEHALLADDLFCIHGPPGTGKTRTLVEIVRRAAQAGEDVLVCADSNQA----VDN 397
Query: 260 LVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKN 319
LV G R A D Q L D + +N ++ +
Sbjct: 398 LV--------AGASTR-------EAADPQSLHAYGQHGDGDY--TLDRVNAG--QSSNGV 438
Query: 320 TRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAA 379
RR A DV ADVV T A + + FDLV++DEA
Sbjct: 439 VRR-------------------AYGDVPGRADVVAVTNNSAATLARE---FDLVVLDEAT 476
Query: 380 QALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYG--DEVTS 437
Q+ A I L++ R +LAGDH QLPP S E G +LFE L G D V
Sbjct: 477 QSTCAASCIPLVRADRAVLAGDHRQLPPYSASDEPPASSYGHSLFEHLYADGGVYDGVGL 536
Query: 438 MLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEED 497
L QYRMH I + +++ Y+ ++ S P + ++ G +
Sbjct: 537 QLQTQYRMHRDIAYFPNRRFYDRTLRN--GRAVNPLSDRPAIEGYNVGG----RVETVGH 590
Query: 498 STMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLLK-ILRSKDDKLKNMEVSTV 556
S N EA + +AH + + S V A +IG+ITPY+AQV ++ IL + D + V T+
Sbjct: 591 SRTNPTEARL-VAHLVQDLLSDVPAEEIGVITPYSAQVSKIREILTERTDAADGVTVDTI 649
Query: 557 DGFQGREKEAIIISMVRSNSKKEVGFLS----DRRRMNVAVTRARRQCCLVCDTETVSSD 612
D FQG E+ AI++S+VRSN+ VGFL RR+NVA+TRA+R C +V D T+ D
Sbjct: 650 DSFQGGERTAIVLSLVRSNADGNVGFLGRPVDGPRRLNVALTRAKRYCAVVADWHTLRYD 709
Query: 613 GFLKRLIEYFEEHAEYLSGSEYLNE 637
K + + + +++S ++ LN+
Sbjct: 710 ADGK-CTDLYSDLYQFVSNTDRLND 733
>gi|343427563|emb|CBQ71090.1| related to regulator of nonsense transcripts 1 [Sporisorium
reilianum SRZ2]
Length = 916
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 154/526 (29%), Positives = 249/526 (47%), Gaps = 101/526 (19%)
Query: 176 FGEQKPTVLKKDIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVV---EI 232
F Q P V+ D P L+ SQ A++ L + V ++ GPPGTGKT T+V ++
Sbjct: 323 FSRQHPIVIDGD----PL-PELNRSQTQAVAMMLRER-VSLIQGPPGTGKTRTIVTAIKL 376
Query: 233 ILQEVKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLR- 291
+ Q+ + I+ A +N+AVDN+ + + +R+VR+G AR + E LDA LR
Sbjct: 377 LKQDFRVPHPIMLAAHTNVAVDNLADGCIKAGLRVVRIGPSARARAGIDEYTLDAYFLRH 436
Query: 292 -----------------------------GDNSSLASDIRKEMKALNGKLLKTKDKNTRR 322
G +S S +R+E++ ++ K+ +
Sbjct: 437 PAKPRLDQIKKRLDTLDRLKSEYELGRMGGFGTSSGSALREELEEGEAAIV-PKEAQSWE 495
Query: 323 EI-----------QKELRTLSKE----ERKRQQLAVT----------DVIKNADVVLTTL 357
++ Q + T S+E +++ +L T +++ ADV+ +
Sbjct: 496 DVMAEREEEREAAQPQGGTASEEYEAIKKQLNRLKATYFFLRASIRGEILNGADVICGSA 555
Query: 358 TGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCI-LAGDHLQLPPTVQSVEAEK 416
A S +LD +V DEA+ A E + L+KG R + + GDH QLPP V SVEA++
Sbjct: 556 IAAGSPELDMIDLPVVFFDEASMATEPVSLVPLMKGCRHLSIIGDHKQLPPVVTSVEAKQ 615
Query: 417 KGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK------------- 463
GL R+LFERL + ++ML VQ+RMH + + +K Y+ ++
Sbjct: 616 GGLSRSLFERLIQSESNIPSTMLNVQFRMHPSLAEFPNKTFYDGALENGQGTELIAPVAS 675
Query: 464 --AHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG-- 519
SG L ID G E K + S N EA + + L++
Sbjct: 676 SYWPASGNTAADKNAHRLCFIDHKG--RETKAENSTSLCNAAEARIVVDVVVDLLRQNPE 733
Query: 520 VHASDIGIITPYAAQVVLLK----------------ILRSKDDKLKNMEVSTVDGFQGRE 563
+ DIG++TPYA Q +LL+ +L ++ +L ++++ TVDGF+GRE
Sbjct: 734 LTGDDIGVVTPYAGQQILLEKMLHNEASPARKQAASVLATRASELGSIDMHTVDGFEGRE 793
Query: 564 KEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 609
K+ I+ S VR+N+ VGFL+D RR+NVA+TRA+ L+ + +T
Sbjct: 794 KKVILFSTVRTNAHGYVGFLADARRLNVALTRAQSALFLIGNIDTF 839
>gi|351713804|gb|EHB16723.1| Regulator of nonsense transcripts 1 [Heterocephalus glaber]
Length = 1068
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 142/417 (34%), Positives = 213/417 (51%), Gaps = 34/417 (8%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+HSQ A+ L + + ++ GPPGTGKT T I+ ++G+ +L CA SNIAVD
Sbjct: 422 DLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 480
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK--EMKALNGKL 312
+ E++ +++VRL +R A+D+ V +L + IR M L KL
Sbjct: 481 QLTEKIHQTGLKVVRLCAKSR-------EAIDSPV---SFLALHNQIRNMDSMPELQ-KL 529
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
+ KD+ E K R ++ A +++ NADV+ T GA +L F
Sbjct: 530 QQLKDETGELSSADE-----KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 584
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ QA E C + ++ G++ IL GDH QL P V +A K GL ++LFERL L
Sbjct: 585 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 644
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS------TEPTLLLIDIA 485
+ L VQYRMH + + S Y ++ + R +P +
Sbjct: 645 IRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYV 702
Query: 486 GCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKIL 541
EE S +N EA +L+++G IGIITPY Q V ++
Sbjct: 703 TQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFS 762
Query: 542 RSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
S KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NVA+TRAR
Sbjct: 763 GSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 819
>gi|398398643|ref|XP_003852779.1| hypothetical protein MYCGRDRAFT_41426, partial [Zymoseptoria tritici
IPO323]
gi|339472660|gb|EGP87755.1| hypothetical protein MYCGRDRAFT_41426 [Zymoseptoria tritici IPO323]
Length = 1778
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 166/526 (31%), Positives = 252/526 (47%), Gaps = 96/526 (18%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII-------LQEVKRGS------- 241
+++ +Q +AI+ AL ++ ++ GPPG+GKT T+V I+ L +G+
Sbjct: 1252 DVNRAQSEAINAALENEGFSLIQGPPGSGKTKTIVAIVGGLLTHTLSSAYKGATRISMPN 1311
Query: 242 ----------KILACAASNIAVDNIVERLV---------PHRVRLVRLGHPARL------ 276
K+L CA SN AVD IV RL H + +VR+G R+
Sbjct: 1312 GNANADGAVKKLLVCAPSNAAVDEIVMRLKEGVKTKDGRSHDINVVRIGRSERINAMVGD 1371
Query: 277 --LPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLL-----------------KTKD 317
+ ++++ L + +++ KE + ++ +L K D
Sbjct: 1372 VTMEELVQKKLGGNQMDEQKRKATAELFKEHQQVSHQLQEMYTQRNANEKMEESERKKLD 1431
Query: 318 KNT----RREIQ----------KELRTLSKEE--RKRQQLAVTDVIKNADVVLTTLTGAV 361
N RR+ + +EL ++E RKR Q AV D A V+ TL+G+
Sbjct: 1432 DNIGHVRRRKAELGSRIDQTKDRELAAGREQELNRKRAQQAVLD---EAHVICATLSGSG 1488
Query: 362 SRKLD--NTSFDLVIIDEAAQALEIACWIALLKGS-RCILAGDHLQLPPTVQSVEAEKKG 418
N F+ VIIDEAAQ +E++ I L G +CI+ GD QLPPTV S EA +
Sbjct: 1489 HDMFQSLNIEFETVIIDEAAQCVEMSSLIPLKYGCVKCIMVGDPKQLPPTVFSKEAARFQ 1548
Query: 419 LGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIK--AHPSGVKRTSSTE 476
++LF R+ + + +EV +L QYRMH I + S Y+ K+K ++ + +++ S
Sbjct: 1549 YEQSLFVRMQNNFPNEV-HLLDTQYRMHPDISAFPSATFYDHKLKDGSNMAALRKKSWHA 1607
Query: 477 PTLL----LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD----IGII 528
LL D+ G K S +N E EVAMA RL D IGII
Sbjct: 1608 SNLLAPYRFYDVKGQHSAAPKGF--SLVNHAEVEVAMALYSRLTTDFGSTYDFSNRIGII 1665
Query: 529 TPYAAQVVLLKILRSKD---DKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSD 585
TPY +Q+ LL+ S + L+ +E +T D FQGRE E II S VR++ K VGFL D
Sbjct: 1666 TPYKSQLELLRKKFSTAFGLEILEKVEFNTTDAFQGREAEIIIFSCVRASDKGGVGFLQD 1725
Query: 586 RRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
RRMNV +TRA+ ++ ++E++S + + LIE E + G
Sbjct: 1726 IRRMNVGLTRAKCSLWVLGNSESLSRGQYWRLLIEDVERKGAMVKG 1771
>gi|448305979|ref|ZP_21495900.1| hypothetical protein C495_16780 [Natronorubrum sulfidifaciens JCM
14089]
gi|445587204|gb|ELY41470.1| hypothetical protein C495_16780 [Natronorubrum sulfidifaciens JCM
14089]
Length = 743
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 151/481 (31%), Positives = 227/481 (47%), Gaps = 60/481 (12%)
Query: 138 LRLEKLANEVTYRRMKDALIQLSKGVQNGPA-AGLIPVLFGEQKPTVLKKDIAFKPFNSN 196
L +L N + + R A+ Q+ K + G PV F + + +I
Sbjct: 283 LWFHELLNPIPFERRLTAINQVKKNEEKRELLTGQRPVEFNVDRYAIPDPEI-------E 335
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNI 256
L+ Q A A S+ V +HGPPGTGKT T+ + V++G +L A SN AVDN+
Sbjct: 336 LNDYQYQAHLWADSANAVVCIHGPPGTGKTRTLTAYVRHAVEKGQSVLVTAHSNQAVDNL 395
Query: 257 VERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK 316
+ +G R P+ E L A +A D ++ +
Sbjct: 396 L------------VGDSTRSSPE--EDTLHA---------MAQDPDMDLS------IARV 426
Query: 317 DKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIID 376
NTR + + V +K ADV+ T +GA D FD+ ++D
Sbjct: 427 GNNTRNSVV-------------EANYVGRSLKAADVIAATTSGA--SHFDQNEFDVAVVD 471
Query: 377 EAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVT 436
EA QA A IAL + +LAGDH QLPP + + + +LFE L + Y D+++
Sbjct: 472 EATQASRPATAIALNCAQKLVLAGDHKQLPPYCADESMQDEEMHISLFEYLLERYSDDIS 531
Query: 437 SMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEE 496
+L QYRM+E I + + Y K+K T ++ +DI G E+++
Sbjct: 532 VLLRKQYRMNEEIAAFPNDAFYGGKLKTADRCRDWTVDDLKPIMGVDIDGD--EQREAHG 589
Query: 497 DSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQV--VLLKILRSKDDKLKNMEVS 554
+S N EAE K L+QSG+ SDIG+IT Y+ QV V+ ++ R ++V
Sbjct: 590 NSLYNIEEAEAVAKQVKLLVQSGLDPSDIGVITAYSGQVRKVIDRVNRLDIYDPTRVDVD 649
Query: 555 TVDGFQGREKEAIIISMVRSNSKKEVGFL----SDRRRMNVAVTRARRQCCLVCDTETVS 610
T+D FQG E+EAIIIS VRSN + GFL RR+NVA+TRAR++ L+ + +T+
Sbjct: 650 TIDSFQGGEREAIIISFVRSNEEGHSGFLEFPEEGPRRLNVALTRARKRLVLIGNWDTLG 709
Query: 611 S 611
+
Sbjct: 710 T 710
>gi|388853403|emb|CCF53023.1| related to SEN1 protein [Ustilago hordei]
Length = 2314
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 169/527 (32%), Positives = 254/527 (48%), Gaps = 113/527 (21%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR----------------- 239
++ Q AI +L++ ++ GPPGTGKT T+ +I V R
Sbjct: 1500 VNEPQARAILGSLATGGFSLIQGPPGTGKTKTICALIGAFVSRRKGPSTSVQAGQAQGKV 1559
Query: 240 --GSKILACAASNIAVDNIVE------RLVPHRV---RLVRLGHP------------ARL 276
KIL CA SN A+D + + RL+ +V ++VR+G L
Sbjct: 1560 GATKKILLCAPSNAAIDEVAKRARAGIRLLDGKVIHPKVVRVGREETINVSVKDISLEYL 1619
Query: 277 LPQVLE-----------------SALDAQV----------------LRGD-NSSLASDIR 302
+ Q LE SAL A++ RG + +LA+ +
Sbjct: 1620 IEQRLEGGSAFDANRNSATAADPSALHAEIHKLKMQREQKQDELSQARGSGDGALATQLE 1679
Query: 303 KEMKALNGKLL-------KTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLT 355
E++ L+ K L + KDK + Q+E +R+R +L +++ +ADV+ T
Sbjct: 1680 AEIRNLSAKRLGIMSKLDEAKDKQQSQHRQRE------ADRRRARL---EILGDADVICT 1730
Query: 356 TLTGAVSRKLDNTSFDL--VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSV 412
TL+GA L +FD V+IDEAAQA+E++ I L G + CI+ GD QLPPTV S
Sbjct: 1731 TLSGAGHEMLSGVAFDFETVVIDEAAQAVELSTIIPLRYGCKQCIMVGDPNQLPPTVISQ 1790
Query: 413 EAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT 472
+A+K G ++LF R+ + + +L++QYRMH I + SK Y+SK++ P + T
Sbjct: 1791 QADKLGYSQSLFVRMFE-RAPQAVHLLSIQYRMHPEISVFPSKAFYDSKLQDGPDMAELT 1849
Query: 473 SS-------TEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHAS-- 523
T P L E S +N+ EA VA+A +RL +
Sbjct: 1850 RQPWHKYELTRPFKFL----STKAPESPGRFHSIINKEEANVALALYERLRTDNPRENFD 1905
Query: 524 -DIGIITPYAAQVVLLKIL---RSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSK-K 578
IGI+T Y AQV LK R D ++ ++ +TVDGFQG+EK+ II+S VRS K
Sbjct: 1906 YRIGIVTMYKAQVFELKRTFQQRYGQDIVERIDFNTVDGFQGQEKDIIILSCVRSLPKPS 1965
Query: 579 EVGFLSDRRRMNVAVTRARRQCCLVCDTETV-SSDGFLKRLIEYFEE 624
+GFLSDRRR+NVAVTRA+ ++ + E + D + L+ E+
Sbjct: 1966 SIGFLSDRRRLNVAVTRAKSNLFIIGNAEHLRRGDAIWESLVAAAEQ 2012
>gi|448081930|ref|XP_004195009.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
gi|359376431|emb|CCE87013.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
Length = 959
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 181/635 (28%), Positives = 295/635 (46%), Gaps = 59/635 (9%)
Query: 22 MAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKG 81
APL+ LE E + S S+ L+ Q + S LN L TL F++ +
Sbjct: 241 FAPLVKLESEFDKSLK----ESQALEHIQVRWSLGLN------NRHLASFTLSTFETNE- 289
Query: 82 DVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRL-----KDSSITVAFDDIPEE-GLN 135
K D ++L+ P G+G + RL +D ++ + +P L
Sbjct: 290 -----LKVAVGDEIILRYGGLS-QDPWEGRGFIVRLPSAYQEDFTLELNPSKVPPPVHLT 343
Query: 136 SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNS 195
+ E + +Y RM+ A+ + ++ + +L E +P + K ++
Sbjct: 344 TGFTAEFVWKGTSYDRMQQAMKTFALKKESVSSYIYHKILGHEVEPVEFDMKLPKKLSHA 403
Query: 196 NL---DHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSK-ILACAASNI 251
+L + SQ +A+ K++ + + ++ GPPGTGKT T I+ K K IL CA SN+
Sbjct: 404 SLTELNSSQTNAV-KSVLQRPLSLIQGPPGTGKTVTSATIVYHLSKLHKKRILVCAPSNV 462
Query: 252 AVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGK 311
AVD++ +L +++VRL +R + +ES++ L A K++ +
Sbjct: 463 AVDHLANKLNLLGLKVVRLTAKSR---EDVESSVKHLALHNKVYDSARGELKKLYNMRNS 519
Query: 312 LLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
L + +++T+R IQ LS+ R ++ + DVV T GA R+L F
Sbjct: 520 LGELSEEDTKRLIQ-----LSRTAEMR-------LLSSCDVVCCTCVGAGDRRLARFKFR 567
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ QA E I ++KG++ IL GDH QL P + A GL ++LFERL L
Sbjct: 568 TVLIDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILEKRAGDAGLKQSLFERLVVL 627
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSG----VKRTSSTEPTL--LLIDI 484
V L VQYRM+ + + S Y ++ + +K S P + ++
Sbjct: 628 --GHVPIRLEVQYRMNPCLSEFPSNMFYEGSLQNGVTTKERLIKNASFPWPVIDHPMMFW 685
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL------ 538
A EE S +N EA RL + G+ IG+ITPY Q L
Sbjct: 686 ANYGREEISGSGHSFLNRVEAMNVEKIITRLFKDGIGPEQIGVITPYEGQRAYLIQYMSI 745
Query: 539 -KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
L D+ +E+++VD FQGREK+ II+S VR+N ++ +GFLSD RR+NVA+TRA+
Sbjct: 746 NSTLTEMKDRYLEVEITSVDAFQGREKDFIILSCVRANDQQTIGFLSDSRRLNVALTRAK 805
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
++ + + + L+ +F E + G+
Sbjct: 806 YGLVILGNPRALCRNTLWNHLLVHFREKGCLVDGT 840
>gi|19173651|ref|NP_597454.1| similarity to HYPOTHETICAL ZINC FINGER PROTEINS YDRD_SCHPO
[Encephalitozoon cuniculi GB-M1]
gi|19170857|emb|CAD26631.1| similarity to HYPOTHETICAL ZINC FINGER PROTEINS YDRD_SCHPO
[Encephalitozoon cuniculi GB-M1]
Length = 563
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 227/451 (50%), Gaps = 82/451 (18%)
Query: 187 DIAFKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILAC 246
D+ F ++S+L+ SQ+ A+ + L + + + GPPGTGKT TVVEII Q + S +L C
Sbjct: 168 DLNF--YDSSLNSSQRSAV-EMLGCRTPYKILGPPGTGKTRTVVEIISQLLAANSSVLVC 224
Query: 247 AASNIAVDNIVERLVPHRVRLV------RLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
SN++VDNI+ER + R L RLG + L + LD LA
Sbjct: 225 GPSNVSVDNIIERFLRSRYFLCNQPSFYRLGSSTKGLSHL---NLDF---------LAES 272
Query: 301 IRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA 360
K MK G D++ RR++ R+RQ+ V + N+ VV TL +
Sbjct: 273 HTKFMKEEKG------DRSFRRDL-----------RERQRKFVEEKQANSPVVFATLFSS 315
Query: 361 VSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLG 420
+ K FD V++DEA QA E ++A++KG IL GD +QL P S
Sbjct: 316 LKEK---RKFDWVLVDEACQASEAESFLAVVKGRAFILVGDPMQLCPETSS--------- 363
Query: 421 RTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPT-- 478
L+E LA T +L QYRM ++ +S++ Y ++K+ T P
Sbjct: 364 --LYESLA-----LPTMLLNEQYRMPSDLLRFSNEVFYRGQVKSA------TRECTPVFG 410
Query: 479 ---LLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQV 535
+L +D ++ E S N GEAE+ R I + +GII PY +QV
Sbjct: 411 KSFILFVDTQYFELYESGGVSKS--NIGEAEIV-----RSIVGILKEEQVGIIAPYTSQV 463
Query: 536 VLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
+LL+ ++ ++EVSTVDGFQG+E++ II+++VR N + + GFL + +R+NVA+TR
Sbjct: 464 LLLR-------EMVDVEVSTVDGFQGQERDYIILTLVRCNDRDDFGFLDNGKRLNVALTR 516
Query: 596 ARRQCCLVCDTETVSSDGFLKRLIEYFEEHA 626
R+ +V D+ T ++L + +++
Sbjct: 517 CRKGLVIVGDSRTFRRSETFRKLFRFLGDNS 547
>gi|448387263|ref|ZP_21564594.1| Superfamily I DNA and RNA helicase and helicase subunits-like
protein [Haloterrigena salina JCM 13891]
gi|445671980|gb|ELZ24558.1| Superfamily I DNA and RNA helicase and helicase subunits-like
protein [Haloterrigena salina JCM 13891]
Length = 751
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 146/426 (34%), Positives = 219/426 (51%), Gaps = 69/426 (16%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNI 256
L+ Q+ A+S AL + ++F +HGPPGTGKT T+VE++ + V+ G +L CA SN AVDN+
Sbjct: 343 LNQEQELAVSCALLADHLFCIHGPPGTGKTRTLVEVVRRSVQAGDDVLVCADSNQAVDNL 402
Query: 257 VERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTK 316
V G +++ +D R +L+
Sbjct: 403 VA---------------------------------GSSTAATADER----SLHAYAQHGA 425
Query: 317 DKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDLVIID 376
D+ R + S + ++ A D ADVV T + A + LD FD++++D
Sbjct: 426 DEFVLRRVNA---GNSSNDVVGERYATCD--GRADVVAATNSSAAT--LDR-EFDVLVLD 477
Query: 377 EAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGD--- 433
EA QA A I L + ++ +LAGDH QLPP + + + G +LFE LY D
Sbjct: 478 EATQATCTASCIPLARANKVVLAGDHKQLPPFSATEDPPESAAGMSLFEH---LYADGGV 534
Query: 434 --EVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS-STEPTLLLIDIAGCDME 490
V L QYRMH I +S+++ Y+ ++ G S + P L+ D+ G E
Sbjct: 535 YEGVGVQLRTQYRMHRDIAWFSNRRFYDRALR---QGRDVASLADRPALVGYDVGGS--E 589
Query: 491 EKKDEEDSTMNEGEAEVAMAHAKRL-IQSGVHASDIGIITPYAAQVVLLKI-LRSKDDKL 548
E D S N+ EA + L ++G+ A++IG+ITPY AQV ++ L ++ ++
Sbjct: 590 ETIDH--SKRNDAEARLVAHVVDELRTEAGLEAAEIGVITPYTAQVDAVRTKLTAQLERG 647
Query: 549 KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR-----RRMNVAVTRARRQCCLV 603
+ + V T+D FQG EK AI+IS+VRSN+ EVGFL DR RR+NVA+TRA R C L+
Sbjct: 648 REVTVDTIDSFQGSEKVAIVISLVRSNADGEVGFL-DRPLDGPRRLNVAMTRAERFCALI 706
Query: 604 CDTETV 609
D T+
Sbjct: 707 GDWYTL 712
>gi|358341434|dbj|GAA49117.1| regulator of nonsense transcripts 1 [Clonorchis sinensis]
Length = 1183
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 146/453 (32%), Positives = 225/453 (49%), Gaps = 55/453 (12%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVK-RGSKILACAASNIAVDN 255
L+HSQ A+ K + + + ++ GPPGTGKT T I+ K K+L A SN AVD
Sbjct: 309 LNHSQVFAV-KTVLQRPLSLIQGPPGTGKTVTSASIVYHLNKIHQKKVLVVAPSNTAVDQ 367
Query: 256 IVERLVPHRVRLVRLGHPARLLPQVLESALD-------AQVLRGDNSSLASDIRK--EMK 306
+ E++ +++VRL +R + L S + AQ ++G S++RK ++K
Sbjct: 368 LCEKISRTGLKVVRLCARSR---EALASPVSHLMLHVQAQHVKGH-----SELRKLQQLK 419
Query: 307 ALNGKLLKTKDKNTR---REIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSR 363
G+L + +K R RE+++EL + ADVV T A +
Sbjct: 420 DETGELSQADEKRYRLLKRELEREL------------------LVAADVVCCTCVTAGDQ 461
Query: 364 KLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRT 422
+L+ SF V+IDE+ QA E C I L+ G R +L GDH QL P + +A GL ++
Sbjct: 462 RLERLSFHSVLIDESTQATEPECLIPLMVGCRQVVLVGDHCQLGPVITCKKAANAGLTQS 521
Query: 423 LFERLADLYGDEVTSM-LTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTE----- 476
LFER L + M L VQYRMH + + S Y ++ + R +
Sbjct: 522 LFERFVLL---GIRPMRLQVQYRMHPALSAFPSNVFYEGSLQNGVTAEDRCKQIDFPWPN 578
Query: 477 PTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVV 536
P + EE S +N EA ++++ GVH + IG+ITPY Q
Sbjct: 579 PDRPMFFYCTSGQEEISGNGVSYLNRTEAATVEKIVTKMLKIGVHPNTIGVITPYEGQRA 638
Query: 537 LL----KILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNV 591
L S + KL + +E+++VD FQGREK+ II+S VR+N + +GFL+D RR+NV
Sbjct: 639 YLAHYLHYSGSLNSKLYQEIEIASVDAFQGREKDYIILSCVRANENQGIGFLNDPRRLNV 698
Query: 592 AVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
A+TRAR +V + + + +L+ ++ E
Sbjct: 699 ALTRARYGLIVVGNPKALCKQPLWNQLLHFYRE 731
>gi|448086434|ref|XP_004196100.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
gi|359377522|emb|CCE85905.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
Length = 958
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 182/635 (28%), Positives = 296/635 (46%), Gaps = 59/635 (9%)
Query: 22 MAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEFQSTKG 81
APL+ LE E + S S+ L+ Q + S LN + L TL F++ +
Sbjct: 241 FAPLVKLESEFDKSLK----ESQALEHIQVRWSLGLNNR------HLASFTLSTFETNE- 289
Query: 82 DVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRL-----KDSSITVAFDDIPEE-GLN 135
K D ++L+ + S G+G + RL +D ++ + +P L
Sbjct: 290 -----LKVAVGDEIILRYGGLNQDSWE-GRGFIVRLPSAYQEDFTLELNPSKVPPPVHLT 343
Query: 136 SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAFKPFNS 195
S E + +Y RM+ A+ + ++ + +L E +P + K ++
Sbjct: 344 SGFTAEFVWKGTSYDRMQQAMKTFALKKESVSSYIYHKILGHEVEPVEFDMKLPKKLSHA 403
Query: 196 NL---DHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSK-ILACAASNI 251
+L + SQ +A+ K++ + + ++ GPPGTGKT T I+ K K IL CA SN+
Sbjct: 404 SLTELNSSQTNAV-KSVLQRPLSLIQGPPGTGKTVTSATIVYHLSKLHKKRILVCAPSNV 462
Query: 252 AVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGK 311
AVD++ +L +++VRL +R + +ES++ L A K++ +
Sbjct: 463 AVDHLANKLNLLGLKVVRLTAKSR---EDVESSVKHLALHNKVYDSAKGELKKLYNMRNS 519
Query: 312 LLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFD 371
L + + +T+R IQ LS+ R ++ + DVV T GA R+L F
Sbjct: 520 LGELSEDDTKRLIQ-----LSRTAEMR-------LLSSCDVVCCTCVGAGDRRLTRFKFR 567
Query: 372 LVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADL 430
V+IDE+ QA E I ++KG++ IL GDH QL P + A GL ++LFERL L
Sbjct: 568 TVLIDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILEKRAGDAGLKQSLFERLVVL 627
Query: 431 YGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSG----VKRTSSTEPTL--LLIDI 484
V L VQYRM+ + + S Y ++ + +K S P + ++
Sbjct: 628 --GHVPIRLEVQYRMNPCLSEFPSNMFYEGSLQNGVTTKERLIKNASFPWPVIDHPMMFW 685
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL------ 538
A EE S +N EA RL + G+ IG+ITPY Q L
Sbjct: 686 ANYGREEISGSGHSFLNRVEAMNVEKIITRLFKDGIGPEQIGVITPYEGQRAYLIQYMSI 745
Query: 539 -KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
L D+ +E+++VD FQGREK+ II+S VR+N ++ +GFLSD RR+NVA+TRA+
Sbjct: 746 NSTLTEMKDRYLEVEITSVDAFQGREKDFIILSCVRANDQQTIGFLSDSRRLNVALTRAK 805
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGS 632
++ + + + L+ +F E + G+
Sbjct: 806 YGLVILGNPRALCRNTLWNHLLVHFREKGCLVDGT 840
>gi|385305772|gb|EIF49721.1| putative nuclear rna processing factor [Dekkera bruxellensis
AWRI1499]
Length = 1066
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 163/502 (32%), Positives = 255/502 (50%), Gaps = 80/502 (15%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII--------------------LQ 235
+++ SQ AI+ A+ + ++ GPPGTGKT T++ +I Q
Sbjct: 396 DVNDSQAVAIAGAVHKEGFSLIQGPPGTGKTKTILGVIGHFLTRMAVARNGSHPIQMPXQ 455
Query: 236 EVKRGS---KILACAASNIAVDNIVERL---------VPHRVRLVRLGHPARLLPQV--- 280
+V R +IL CA SN AVD +V RL V + RLVRLG + QV
Sbjct: 456 QVXRSKEHRRILVCAPSNAAVDELVLRLMRGIKNSKGVIFKPRLVRLGRTDAINEQVKGI 515
Query: 281 -LESALDAQ---VLRGDNSSLASDIRKEM--------KALNGKL---------LKTKDK- 318
LE +D++ V + D++++ RK + K +GKL ++ +D
Sbjct: 516 TLEELVDSKLSSVEKIDDNAIREQHRKCIMERDELREKLDSGKLPEXEIAKAEMRLQDVV 575
Query: 319 NTRREIQKEL------RTLSKEERKRQQLAVT-DVIKNADVVLTTLTGAVSRKLDNTS-- 369
RRE+ K+L R++S R+ ++ + ++ +A+VV +TL+G+ L + S
Sbjct: 576 QKRRELGKKLDEIREKRSVSYRNREIERRNIQFKILNDAEVVCSTLSGSAHDVLASMSLT 635
Query: 370 FDLVIIDEAAQALEIACWIALLKG-SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLA 428
FD V+IDEAAQ E++ I L G ++C++ GD QLPPTV S +A ++LF R+
Sbjct: 636 FDTVVIDEAAQCTELSAIIPLRYGCTKCVMVGDPNQLPPTVLSQKAASYKYEQSLFVRIQ 695
Query: 429 DLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLL----LIDI 484
+ + V +L VQYRMH I + SK+ Y+S++ P+ + S +L D+
Sbjct: 696 NNHKXSVY-LLNVQYRMHPEISMFPSKEFYHSRLLDGPNMAENNSKPWNSLYGPYRFFDV 754
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVH---ASDIGIITPYAAQVVLLKIL 541
G EE+ + S N EA +A+ + L + A +GII+PY QV LLK L
Sbjct: 755 KGA--EEQNEATKSVFNYTEASLALELVEDLFEKFSEINWAGLVGIISPYKEQVKLLKKL 812
Query: 542 ---RSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARR 598
R ++ +TVDGFQG+EKE I+ S V + + +GFL+D RRMNVA+TRAR
Sbjct: 813 FINRFGRIITTQIDFNTVDGFQGQEKEVIVFSCVXAENHTGIGFLADIRRMNVALTRARS 872
Query: 599 QCCLVCDTETVSSDGFLKRLIE 620
++ + ++ + LIE
Sbjct: 873 SLWILGSKXALVNNKTWRDLIE 894
>gi|357621770|gb|EHJ73491.1| putative nonsense-mediated mrna decay protein 1 [Danaus plexippus]
Length = 1037
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 159/509 (31%), Positives = 243/509 (47%), Gaps = 64/509 (12%)
Query: 148 TYRRMKDALIQLSKGVQNGPAAGLIPV-LFGEQKPTVLKKDIAFKPFNS----NLDHSQK 202
++ RM+ AL + + V + +G I L G + VL + K F++ +L+ SQ
Sbjct: 399 SFDRMQLALRKFA--VDDSSVSGYIYRRLLGHEVEEVLFRVHLPKHFSAPNLPDLNRSQV 456
Query: 203 DAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR-GSKILACAASNIAVDNIVERLV 261
A+ AL + + ++ GPPGTGKT T I+ Q V++ G +L CA SN AVD + E++
Sbjct: 457 YAVKHALQ-RPLSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPSNTAVDQLTEKIH 515
Query: 262 PHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTR 321
+++VRL +R + +ES++ L +L S
Sbjct: 516 RTGLKVVRLCAKSR---EAMESSVSFLALHEQARALGS---------------------- 550
Query: 322 REIQKELRTLSKEERKRQQLAVTDVIKN--------------ADVVLTTLTGAVSRKLDN 367
ELR L++ + + +L+ D + ADVV TT GA ++
Sbjct: 551 --ADSELRKLTRLKEEAGELSAADERRYRALRRAAERRLLDAADVVCTTCVGAGDPRVAR 608
Query: 368 TSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFER 426
F ++IDE Q+ E C + ++ G+R IL GDH QL P V +A K GL ++LFER
Sbjct: 609 MRFQSILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFER 668
Query: 427 LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRT------SSTEPTLL 480
L L L VQYRMH + + S Y ++ S +R P
Sbjct: 669 LVVLGIRPFR--LEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPDRP 726
Query: 481 LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VV 536
+ EE S +N EA R +++GV IGIITPY Q V
Sbjct: 727 MFFYVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQIGIITPYEGQRSYLVQ 786
Query: 537 LLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTR 595
++ S KL + +EV++VD FQGREK+ II+S VRSN + +GFLSD RR+NVA+TR
Sbjct: 787 HMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTR 846
Query: 596 ARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
A+ +V + + +S L+ +++E
Sbjct: 847 AKYGLIVVGNPKVLSKQPLWNHLLAFYKE 875
>gi|340975658|gb|EGS22773.1| 5'-3' RNA helicase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1993
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 163/551 (29%), Positives = 260/551 (47%), Gaps = 97/551 (17%)
Query: 174 VLFGEQKPTVLKKDIAFKPF--NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVE 231
+L + P + D A K N L+ Q AI A + ++ GPPGTGKT T+V
Sbjct: 1293 ILKAQPSPMLTFGDEAIKAVMDNYQLNPGQARAILNAKENDGFTLIQGPPGTGKTKTIVA 1352
Query: 232 II---------------LQEVKRGS----------KILACAASNIAVDNIVERL------ 260
++ +Q + G+ K+L CA SN AVD +V RL
Sbjct: 1353 MVGCLLTGVLKSSNTGAVQISRPGAGPTNGTAPSKKLLVCAPSNAAVDELVLRLKAGVKT 1412
Query: 261 ---VPHRVRLVRLGHPARL--------LPQVLESALDAQVLRGDNSSLASDIRKEMKALN 309
H++ ++RLG + L +++++ +DA++ + + S + KE +
Sbjct: 1413 MNGTFHKIEVLRLGRSDVINAAVKDVTLDELVKARMDAELSKNSSPSERDQLHKEAGEIK 1472
Query: 310 GKLLKTK----------DKNTRREIQKELRTLSKE----------------------ERK 337
KL + + D+ + ++Q+E L + E K
Sbjct: 1473 AKLAEIRPQLDAARLSDDRASAMKLQREFDELKRRQAHIGAKIDADKASGNTYARETEIK 1532
Query: 338 RQQLAVTDVIKNADVVLTTLTGAVSRKLDN--TSFDLVIIDEAAQALEIACWIALLKG-S 394
R+Q+ +++ A V+ TL+G+ N F+ VIIDEAAQ +E++ I L G +
Sbjct: 1533 RRQIQ-QEILDKAQVLCATLSGSGHEMFKNLNVEFETVIIDEAAQCVELSALIPLKYGCN 1591
Query: 395 RCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSS 454
+CIL GD QLPPTV S A K G ++LF R+ + +V +L +QYRMH I + S
Sbjct: 1592 KCILVGDPKQLPPTVLSQSAAKYGYDQSLFVRMQKNHPKDV-HLLDMQYRMHPEISRFPS 1650
Query: 455 KQLYNSKIKAHPSGVK-RTSSTEPTLLL-----IDIAGCDMEEKKDEEDSTMNEGEAEVA 508
K+ Y ++ + R ++LL D+ G +E+ + S +NE E +VA
Sbjct: 1651 KEFYEGLLQDGADMARLRLQPWHQSVLLGPYRFFDVKGS--QERGPKNQSLVNEEEVKVA 1708
Query: 509 MAHAKRLIQSGVHASD----IGIITPYAAQVVLLK---ILRSKDDKLKNMEVSTVDGFQG 561
M R +S D IGIITPY AQ+ L+ + R + + +E +T D FQG
Sbjct: 1709 MQLYMRF-RSDYRDIDLTGKIGIITPYKAQLQRLRQKFVERYGESITEQIEFNTTDAFQG 1767
Query: 562 REKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEY 621
RE E II S VR++ +GF++D RRMNV +TRAR ++ D+ + F +LIE
Sbjct: 1768 RECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWILGDSRALVQGEFWAKLIED 1827
Query: 622 FEEHAEYLSGS 632
++ Y +G+
Sbjct: 1828 AKQRDRYTNGN 1838
>gi|402468453|gb|EJW03611.1| hypothetical protein EDEG_02079 [Edhazardia aedis USNM 41457]
Length = 838
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 156/523 (29%), Positives = 247/523 (47%), Gaps = 60/523 (11%)
Query: 141 EKLANEVTYRRMKDALIQLSKGVQNGPAAGL-----------IPVLFGEQKPTVLKKDIA 189
+K NE TY + S+ QN P+ +P F K +L
Sbjct: 343 KKCRNESTYYNDQHNGTSESEDFQNEPSQNFDSISSDSVDWDLPEKFIHTKMEIL----- 397
Query: 190 FKPFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSKILACAAS 249
N NL+ Q +A+ + L+ + + GPPGTGKT+T+VEII Q R K+L C S
Sbjct: 398 ----NPNLNTQQLNAVVQ-LAQNESYKIFGPPGTGKTSTIVEIIYQLRCRNKKVLVCGPS 452
Query: 250 NIAVDNIVERLVPHR--VRLVRLGHPARLLPQVLE---SALDAQVLRGDNSSLAS----D 300
N ++DNI+ + VR+G ++ +L+ S +D ++ + +L++ D
Sbjct: 453 NASIDNIMHGFIKLNTGFDFVRIGSRSKCSEDLLKYNISEIDDVIIGNYHDTLSNLIGED 512
Query: 301 IRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGA 360
IRK+ + D T ++++ + +S +K D D+V TL G+
Sbjct: 513 IRKDAAIDDTVENYNFDYETMEKMEEVYQNMSNYTKK----VAFDKFLQHDLVFATLFGS 568
Query: 361 VSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTVQSVEAEKKGLG 420
+ K FD VIIDE QALEI + +++KG ILAGD QL +
Sbjct: 569 L--KYTTKHFDWVIIDECCQALEIEAFCSVMKGKNFILAGDPCQLGAITYLPDE------ 620
Query: 421 RTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSSTEPTLL 480
+ FER+ G T ML QYRM E ++ +S+ YNS+I + P + ++
Sbjct: 621 ISFFERM----GKIKTIMLQNQYRMPELLIRFSNHYFYNSRIIS-PIICDFKFFDKSPIV 675
Query: 481 LIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRL--IQSGVHASD--------IGIITP 530
ID E K +S N+ E E+ + L I +H +GII+P
Sbjct: 676 FIDTCKSTTSESK-HGNSYYNDHEQEMVIEFLNYLDSIAFQIHEKKNKSNKIVTVGIISP 734
Query: 531 YAAQVVLLKILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 590
Y Q+ +K SK M +STVD FQG+EK+ IIIS+VRSN ++GFL D +RMN
Sbjct: 735 YLEQIERIK-NASKSYNFDLM-ISTVDAFQGQEKDFIIISLVRSNKLSQIGFLKDEKRMN 792
Query: 591 VAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSGSE 633
VA+TR ++ +V ++ + F + ++ ++ A Y+ ++
Sbjct: 793 VAITRCKKGLIIVANSLVFEKNVFYRDYFKFLKKEAYYVDSTQ 835
>gi|425777077|gb|EKV15267.1| tRNA-splicing endonuclease, putative [Penicillium digitatum PHI26]
Length = 2154
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 251/547 (45%), Gaps = 100/547 (18%)
Query: 174 VLFGEQKPTVLKKDIAFKPF--NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVE 231
++ + P + D +P N +++ +Q AI A+ + ++ GPPG+GKT T++
Sbjct: 1281 IVLAKPSPLLTYSDTRLQPIMDNYSINRAQARAIKSAVDNDAFTLIQGPPGSGKTKTIIA 1340
Query: 232 IILQ----------------EVKRGS---KILACAASNIAVDNIVERLV---------PH 263
++ V R + K+L CA SN AVD +V RL
Sbjct: 1341 LVGSLLSDVLGKQLIKVNGAPVARNALSKKLLLCAPSNAAVDELVMRLKDGVRTTNGRQE 1400
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK------------------EM 305
+V ++RLG + +VL+ LD V N+ L D K
Sbjct: 1401 KVSVLRLGRSDAINTKVLDVTLDEMV----NARLNQDPSKGNGVDLQKLYEEHKTTDTSF 1456
Query: 306 KALNGKLLKTKDKN--TRREIQKELRTLSKEERKRQQLAVT------------------- 344
K L G+L + + K E+++E + K KR QL+ +
Sbjct: 1457 KELRGQLDEARAKGLPPPEELEREFDLMKK---KRSQLSTSIDKARDQNHTLARNADMHK 1513
Query: 345 -----DVIKNADVVLTTLTGAVSRKLD--NTSFDLVIIDEAAQALEIACWIALLKG-SRC 396
+I + V+ TTL+G+ N F+ VIIDEAAQ +E++ I L G S+C
Sbjct: 1514 RRIQEQIINESHVICTTLSGSGHEIFQGMNVEFETVIIDEAAQCIELSALIPLKYGCSKC 1573
Query: 397 ILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQ 456
+L GD QLPPTV S A K ++LF R+ + +V +L +QYRMH I ++ S
Sbjct: 1574 VLVGDPKQLPPTVLSKMASKFQYEQSLFVRMQKNHPQDV-HLLDIQYRMHPAISHFPSVT 1632
Query: 457 LYNSKIKAHPSGVK-RTSSTEPTLLL-----IDIAGCDMEEKKDEEDSTMNEGEAEVAMA 510
Y+ K++ P K R + LL D+ G M S +N E +VAM
Sbjct: 1633 FYDGKLQDGPDMAKLRQRPWHQSELLSPYRFFDVQG--MHSSAARGHSLINYAELQVAMQ 1690
Query: 511 HAKRLI---QSGVHASDIGIITPYAAQVVLLK---ILRSKDDKLKNMEVSTVDGFQGREK 564
RLI + A IGIITPY Q+ LK R +D L+ ++ +T D FQGRE
Sbjct: 1691 LYDRLITDVKEYDFAGKIGIITPYKGQLRELKNQFTQRYGEDILRKVDFNTTDAFQGRES 1750
Query: 565 EAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
E II S VR+ S K +GFL+D RRMNV +TRA+ ++ +++++ F LI+ E
Sbjct: 1751 EVIIFSCVRA-SNKGIGFLADIRRMNVGLTRAKSSLWVLGNSQSLEQGQFWNGLIKNARE 1809
Query: 625 HAEYLSG 631
Y G
Sbjct: 1810 RNVYTEG 1816
>gi|388854659|emb|CCF51816.1| related to regulator of nonsense transcripts 1 [Ustilago hordei]
Length = 926
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 150/503 (29%), Positives = 244/503 (48%), Gaps = 94/503 (18%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVV---EIILQEVKRGSKILACAASNIAV 253
L+ SQ A++ L + V ++ GPPGTGKT T+V +++ Q+ + I+ A +N+AV
Sbjct: 347 LNRSQTQAVAMMLRER-VSLIQGPPGTGKTRTIVTAIKLLKQDFQVPHPIMLAAHTNVAV 405
Query: 254 DNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALN---- 309
DN+ + + +R+VR+G AR + + LDA LR + I++ + L+
Sbjct: 406 DNLADGCIKAGLRVVRIGPSARARAGIDQYTLDAYFLRHPAKARLDQIKRRLDTLDRLKS 465
Query: 310 ----GKLLKTK--------------DKNTRREIQKELRTLSKEER--------------- 336
G++ + D + K++ KEER
Sbjct: 466 DYEMGRMSGSASSKVANRLYESVGADGEAVAQSWKDVMAGRKEERDATQSQAGAASVEYE 525
Query: 337 --KRQ--QLAVT----------DVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQAL 382
K+Q +L T +++ ADV+ + A S +LD +V DEA+ A
Sbjct: 526 AVKKQLNRLKATYFFLRASIRGEILNRADVICGSAIAAGSPELDMIDLPVVFFDEASMAT 585
Query: 383 EIACWIALLKGSRCI-LAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTV 441
E + L+KG R + + GDH QLPP V SVEA++ GL R+LFERL + + ++ML V
Sbjct: 586 EPVSLVPLMKGCRHLSIIGDHKQLPPVVTSVEAKQGGLSRSLFERLIESGQNIPSTMLNV 645
Query: 442 QYRMHEHIMNWSSKQLYN-----------------SKIKAHPSGVKRTSSTEPTLLLIDI 484
Q+RMH + + +K Y+ S + +G K++ + L ID
Sbjct: 646 QFRMHPSLAEFPNKAFYDGALQNGKGTEQIAPVESSYWRTRTAGQKKSQDAQ-RLCFIDH 704
Query: 485 AGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSG--VHASDIGIITPYAAQVVLL-KIL 541
G E K D S N EA + + +++ + DIGI+TPYA Q +LL K+L
Sbjct: 705 QG--RESKTDNSTSLYNTSEARIVVDVVVDVLRRNPQLTGDDIGIVTPYAGQQILLEKML 762
Query: 542 R---------------SKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDR 586
+ ++ +L +++ TVDGF+GREK+ I+ S VR+N+ VGFL+D
Sbjct: 763 QNERSDARKKASSAIGARSSQLGFIDIHTVDGFEGREKKVILFSTVRTNALGYVGFLADG 822
Query: 587 RRMNVAVTRARRQCCLVCDTETV 609
RR+NVA+TRA+ ++ + +T
Sbjct: 823 RRLNVALTRAQSAMFIIGNIDTF 845
>gi|425771573|gb|EKV10011.1| tRNA-splicing endonuclease, putative [Penicillium digitatum Pd1]
Length = 2154
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 251/547 (45%), Gaps = 100/547 (18%)
Query: 174 VLFGEQKPTVLKKDIAFKPF--NSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVE 231
++ + P + D +P N +++ +Q AI A+ + ++ GPPG+GKT T++
Sbjct: 1281 IVLAKPSPLLTYSDTRLQPIMDNYSINRAQARAIKSAVDNDAFTLIQGPPGSGKTKTIIA 1340
Query: 232 IILQ----------------EVKRGS---KILACAASNIAVDNIVERLV---------PH 263
++ V R + K+L CA SN AVD +V RL
Sbjct: 1341 LVGSLLSDVLGKQLIKVNGAPVARNALSKKLLLCAPSNAAVDELVMRLKDGVRTTNGRQE 1400
Query: 264 RVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRK------------------EM 305
+V ++RLG + +VL+ LD V N+ L D K
Sbjct: 1401 KVSVLRLGRSDAINTKVLDVTLDEMV----NARLNQDPSKGNGVDLQKLYEEHKTTDTSF 1456
Query: 306 KALNGKLLKTKDKN--TRREIQKELRTLSKEERKRQQLAVT------------------- 344
K L G+L + + K E+++E + K KR QL+ +
Sbjct: 1457 KELRGQLDEARAKGLPPPEELEREFDLMKK---KRSQLSTSIDKARDQNHTLARNADMHK 1513
Query: 345 -----DVIKNADVVLTTLTGAVSRKLD--NTSFDLVIIDEAAQALEIACWIALLKG-SRC 396
+I + V+ TTL+G+ N F+ VIIDEAAQ +E++ I L G S+C
Sbjct: 1514 RRIQEQIINESHVICTTLSGSGHEIFQGMNVEFETVIIDEAAQCIELSALIPLKYGCSKC 1573
Query: 397 ILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQ 456
+L GD QLPPTV S A K ++LF R+ + +V +L +QYRMH I ++ S
Sbjct: 1574 VLVGDPKQLPPTVLSKMASKFQYEQSLFVRMQKNHPQDV-HLLDIQYRMHPAISHFPSVT 1632
Query: 457 LYNSKIKAHPSGVK-RTSSTEPTLLL-----IDIAGCDMEEKKDEEDSTMNEGEAEVAMA 510
Y+ K++ P K R + LL D+ G M S +N E +VAM
Sbjct: 1633 FYDGKLQDGPDMAKLRQRPWHQSELLSPYRFFDVQG--MHSSAARGHSLINYAELQVAMQ 1690
Query: 511 HAKRLI---QSGVHASDIGIITPYAAQVVLLK---ILRSKDDKLKNMEVSTVDGFQGREK 564
RLI + A IGIITPY Q+ LK R +D L+ ++ +T D FQGRE
Sbjct: 1691 LYDRLITDVKEYDFAGKIGIITPYKGQLRELKNQFTQRYGEDILRKVDFNTTDAFQGRES 1750
Query: 565 EAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEE 624
E II S VR+ S K +GFL+D RRMNV +TRA+ ++ +++++ F LI+ E
Sbjct: 1751 EVIIFSCVRA-SNKGIGFLADIRRMNVGLTRAKSSLWVLGNSQSLEQGQFWNGLIKNARE 1809
Query: 625 HAEYLSG 631
Y G
Sbjct: 1810 RNVYTEG 1816
>gi|198435823|ref|XP_002122130.1| PREDICTED: similar to regulator of nonsense transcripts 1 [Ciona
intestinalis]
Length = 1094
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 185/613 (30%), Positives = 292/613 (47%), Gaps = 80/613 (13%)
Query: 17 EFVSVMAPLIDLEKEAEISASITSGASRNLDTAQKKGSTILNLKCVDAQTGLMGKTLLEF 76
++ ++ PL+ LE + + R L +Q + + + GL K L F
Sbjct: 294 QYQNIFGPLVKLEADYD----------RRLKESQTQANVTIRWD-----IGLNKKRLAHF 338
Query: 77 QSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNS 136
Q K D K D + L+ LG+ G+G V ++ D+S D+I E +S
Sbjct: 339 QLPKTDT--DMKLMKGDEISLR----HLGTLWEGKGHVVKVPDNSS----DEIAIELRSS 388
Query: 137 -PLRLEKLAN--------EVTYRRMKDALIQLSKGVQNGPAAGLIP--VLFGEQKPTVLK 185
+ L+K N ++ RM+ A+ + V + I +L E + LK
Sbjct: 389 VGVPLDKTGNFHVDFVWKSTSFDRMQSAMKTFA--VDEASVSTYIYHRLLGHEAEEQTLK 446
Query: 186 KDIAFK---PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGSK 242
++ + P L+HSQ A+ L + + ++ GPPGTGKT T I+ VK +
Sbjct: 447 TNLPKRFSAPGLPELNHSQVYAVKTVLQ-RPLCLIQGPPGTGKTVTSATIVYHLVKSCGQ 505
Query: 243 --ILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASD 300
+L CA SNIAVD + E++ +++VRL +R A+D+ V SL +
Sbjct: 506 RQVLVCAPSNIAVDQLTEKIHRTGLKVVRLCAKSR-------EAIDSNV---SFLSLHNQ 555
Query: 301 IRKEMKALN--GKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLT 358
+R M++L KL + KD+ E K R ++ A +++++ADV+ +T
Sbjct: 556 VRS-MESLPELQKLQQLKDETGELSSNDE-----KRYRALKRNAERELLQHADVICSTCV 609
Query: 359 GAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKK 417
GA +L F ++IDE+ QA E C + ++ G++ IL GDH QL P V +A
Sbjct: 610 GAGDPRLVRFRFRSILIDESTQATEPECMVPVVLGAQQLILVGDHCQLGPVVMCKKAANA 669
Query: 418 GLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR------ 471
GL ++LFERL L + L VQYRMH + + S Y ++ + +R
Sbjct: 670 GLAQSLFERLVVLGIRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAGERMRKNLS 727
Query: 472 --TSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIIT 529
S + + +G EE S +N EA V + ++SG+ IGIIT
Sbjct: 728 FVWPSPDKPMFFYKTSG--QEEIASSGTSYLNRTEAAVVERITTKFLKSGIKPEQIGIIT 785
Query: 530 PYAAQ----VVLLKILRSKDDKLK-NMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLS 584
PY Q V ++ S KL +E+++VD FQGREK+ II+S VR+N + +GFL+
Sbjct: 786 PYEGQRSYLVQYMQYSGSLHSKLYMEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLN 845
Query: 585 DRRRMNVAVTRAR 597
D RR+NVA+TRAR
Sbjct: 846 DPRRLNVALTRAR 858
>gi|241598902|ref|XP_002404932.1| nonsense-mediated mRNA decay protein, putative [Ixodes scapularis]
gi|215502402|gb|EEC11896.1| nonsense-mediated mRNA decay protein, putative [Ixodes scapularis]
Length = 1122
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 148/459 (32%), Positives = 237/459 (51%), Gaps = 50/459 (10%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVDN 255
L+ SQ A+ AL + + ++ GPPGTGKT T I+ VK+ + +L CA SNIAVD
Sbjct: 451 LNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSGTIVYHLVKQSNGPVLVCAPSNIAVDQ 509
Query: 256 IVERLVPHRVRL----VRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNGK 311
+ E++ H+ L VRL +R A+++ V S LA + +++ + G
Sbjct: 510 LTEKI--HQTSLKAGVVRLCAKSR-------EAINSPV-----SFLA--LHNQIRNMEGH 553
Query: 312 LLKTKDKNTRREIQKELRTLSKEERKRQQL----AVTDVIKNADVVLTTLTGAVSRKLDN 367
+ + ++++ E LS + KR ++ ++++ ADV+ T GA +L
Sbjct: 554 ----SELHKLQQLKDETGELSSADEKRYRMLKKACERELLEAADVICCTCVGAGDPRLAR 609
Query: 368 TSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFER 426
F ++IDE+ QA E C + ++ G++ IL GDH QL P V +A + GL ++LFER
Sbjct: 610 FKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 669
Query: 427 LADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGV----KRTSST-----EP 477
L L + L VQYRMH + + S Y ++ +GV +R +P
Sbjct: 670 LVVLGIRPLR--LEVQYRMHPQLSKFPSNFFYEGSLQ---NGVFADERRMKGVDFPWPQP 724
Query: 478 TLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ--- 534
++ A EE S +N EA + A R ++S V IGIITPY Q
Sbjct: 725 DKPMLFYACQGQEEMAGSGTSYLNRTEAALVEKIATRFLRSAVKPQQIGIITPYEGQRAY 784
Query: 535 -VVLLKILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVA 592
V ++ + KL + +EV++VD FQGREK+ I++S VRSN + +GFL+D RR+NVA
Sbjct: 785 LVQHMQFQGALHAKLYQEIEVASVDAFQGREKDLIVMSCVRSNEHQGIGFLNDPRRLNVA 844
Query: 593 VTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
+TRAR +V + + +S L+ +++E+ + G
Sbjct: 845 LTRARYGIIIVGNPKVLSKQPLWNHLLSFYKENRVLVEG 883
>gi|294875682|ref|XP_002767434.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239869001|gb|EER00152.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 559
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 138/424 (32%), Positives = 219/424 (51%), Gaps = 38/424 (8%)
Query: 192 PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRG-SKILACAASN 250
P L+HSQ A+ KAL + + ++ GPPGTGKT T II ++ ++L A SN
Sbjct: 11 PNLPQLNHSQVQAVQKALE-QPLSLIQGPPGTGKTVTSATIIYHLARQHQGQVLVTAPSN 69
Query: 251 IAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSSLASDIRKEMKALNG 310
IAVD + E++ +++VR+ +R + L S ++ L ++ + KE K L
Sbjct: 70 IAVDQLAEKIHLTGLKVVRILAKSR---ECLYSPVEFLSLHTQIRNMRTPQAKEFKKLF- 125
Query: 311 KLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDV----IKNADVVLTTLTGAVSRKLD 366
++++E+ L+ + KR ++ + V ++NADV+ TT GA +L
Sbjct: 126 ------------DLKEEVGELTSSDEKRFRILRSQVERELLENADVICTTCAGAGDPRLG 173
Query: 367 NTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFE 425
F +V++DEA QA E I + G++ IL GDH QL P V +A K G ++LFE
Sbjct: 174 KLRFKMVLVDEATQACEPEALIPICNGAKQVILVGDHKQLGPVVMCKKAAKAGFKQSLFE 233
Query: 426 RLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKA-------HPSGVKRTSSTEPT 478
RL L + L VQYRMH + + S+ Y+ ++ SGVK E
Sbjct: 234 RLIALGVRPIR--LEVQYRMHPSLAEFPSQTFYDGCLQNGITMEDRQVSGVKFPWPRE-E 290
Query: 479 LLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQVVLL 538
+ + EE S +N EA +++G+ S IG++TPY Q +
Sbjct: 291 MPMFFYNSTGQEEISASGTSYLNRSEAINIEKIITYFLRAGLKGSQIGVVTPYEGQRAYI 350
Query: 539 KILRSKDDKL-----KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAV 593
+ + + L +++E+++VD FQGREK+ I++S VRSN + +GFL+D RR+NVA+
Sbjct: 351 QQVLQRQTTLSAKMYESIEIASVDAFQGREKDFIVLSCVRSNQRAGLGFLNDPRRLNVAL 410
Query: 594 TRAR 597
TRAR
Sbjct: 411 TRAR 414
>gi|388851768|emb|CCF54574.1| related to SEN1 protein [Ustilago hordei]
Length = 900
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 165/499 (33%), Positives = 248/499 (49%), Gaps = 95/499 (19%)
Query: 197 LDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKR----------------- 239
++ Q AI +L+++ ++ GPPGTGKT T+ +I V R
Sbjct: 252 VNEPQARAILGSLATEGFSLIQGPPGTGKTKTICALIGAFVSRQKGPSTSVQAGQAQGKV 311
Query: 240 --GSKILACAASNIAVDNIVER------LVPHRV---RLVRLGHPARL--------LPQV 280
KIL CA SN A+D + +R L+ +V ++VR+G + L +
Sbjct: 312 DATKKILLCAPSNAAIDEVAKRARASIRLLDGKVIHPKVVRVGREEAVNVSVKDISLEYL 371
Query: 281 LESALDAQ---------VLRGDNSSLASDI------RKEMKALNGKLLKTKDKNTRREIQ 325
+E L A V D S+L ++I RK+ + + ++ DK +++
Sbjct: 372 VEQRLKADGVFDGNRNIVTAADLSALHAEIHHLKMQRKQKQNKLSQARRSGDKALATQLK 431
Query: 326 KELRTLS------------KEERKRQQL------AVTDVIKNADVVLTTLTGAVSRKLDN 367
E+R LS K++ + +QL A +++ ADV+ TTL+GA + L
Sbjct: 432 AEIRNLSANVKSKFDEAKGKQKSQHRQLEALRRRARLEILGEADVICTTLSGAGHKMLSR 491
Query: 368 TSFDL--VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLF 424
+FD V+IDEAAQA+E++ I L G + CI+ GD QLPPTV S +A+K G ++LF
Sbjct: 492 VAFDFETVVIDEAAQAVELSTIIPLRYGCKQCIMVGDPNQLPPTVISQQADKLGYSQSLF 551
Query: 425 ERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTSS-------TEP 477
R+ + EV +L++QYRMH I + +K Y SK++ P + T T P
Sbjct: 552 ARMFERAPQEV-HLLSIQYRMHPEISLFPAKAFYGSKLQDGPDMAESTHQPWHRYELTRP 610
Query: 478 TLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASD-----IGIITPYA 532
L A E S +N+ EA VA+A RL HA + IGI+T Y
Sbjct: 611 FKFLSTKA----PESPGPFHSIINKEEANVALALYGRLRTD--HAQENFDYRIGIVTMYK 664
Query: 533 AQVVLLKIL---RSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSK-KEVGFLSDRRR 588
AQV LK R D ++ ++ +TVDGFQG+EK+ II+S VRS K +GFL D RR
Sbjct: 665 AQVFELKQTFQQRYGKDIVERIDFNTVDGFQGQEKDIIILSCVRSLPKPSSIGFLRDGRR 724
Query: 589 MNVAVTRARRQCCLVCDTE 607
+NVAVTRA+ ++ + E
Sbjct: 725 LNVAVTRAKSNLFIIGNAE 743
>gi|440291801|gb|ELP85043.1| splicing endonuclease positive effector sen1, putative [Entamoeba
invadens IP1]
Length = 1569
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 168/542 (30%), Positives = 270/542 (49%), Gaps = 76/542 (14%)
Query: 136 SPLRLEKLANEVTYRRMKDALIQLSKGVQNGPAAGLIPVLFGEQKPTVLKKDIAF---KP 192
SPLR NE+T ++L K V N P F +P +K + K
Sbjct: 230 SPLREFIALNEITE-------LKLQKQVLN--PQSYKPTYF---RPMSIKYERMLRNKKE 277
Query: 193 FNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII-------------LQEVKR 239
FN SQ A+ ++L+ ++ GPPGTGKT T+ II
Sbjct: 278 FND----SQIHAMFRSLAKSGFSLIQGPPGTGKTMTLCGIIGVILYGNSSSVFSKSSESH 333
Query: 240 GSKILACAASNIAVDNIVERLVP----------HRVRLVRLGHPARLLPQ----VLESAL 285
++L C+ SN A+D I+ +L+ V++VR+G P P+ VLE+ +
Sbjct: 334 HERVLICSPSNAAIDGIIMKLLKMGVYDENGEKKSVKIVRVGTPTLTNPEIKDLVLENLV 393
Query: 286 DAQVLRGDNSSLA------SDIRKEMK---ALNGKLLKTKDKNTRREIQKELRTLSKEER 336
++ R SL +++++++K A N K+ K K K+ + K+ L +
Sbjct: 394 GKEIERRGEMSLEYLDKKINELKEKLKNALATNAKINKDKLKSGLALLLKQKDDLQNKIC 453
Query: 337 KRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSF---DLVIIDEAAQALEIACWIALLKG 393
+ D+I N DV+ TL A L F + IIDEA Q +E++ I L G
Sbjct: 454 AMKHSVTIDIISNCDVICCTLNSAGCDTLQQHLFGKIETCIIDEAVQCVEVSALIPLKYG 513
Query: 394 -SRCILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNW 452
RCI+ GD QLP TV S ++ ++LFERL + G VT +LT QYRM I +
Sbjct: 514 VERCIMIGDQKQLPSTVLSPKSITYKYNKSLFERLLEC-GLNVT-LLTQQYRMESKIREF 571
Query: 453 SSKQLYNSKIKAHPSGVKRTSSTEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHA 512
S + Y ++ A +++ +S ++L +++ C E++ +E S N E + +
Sbjct: 572 PSNEFYEGRL-ADGVKIEKINSVSNSVLFLNV--CGKEDRLGKESSLFNTEEVKAVVFLL 628
Query: 513 KRLIQS--GVHASDIGIITPYAAQVVLLK--ILRSKDDKLKNMEVSTVDGFQGREKEAII 568
+ ++ VH DIGIITPY QV+ +K I +++ K N+ V+TVDGFQGRE + +I
Sbjct: 629 TEISKNVECVHW-DIGIITPYRKQVLDVKKAIEQNEVAKSLNVLVNTVDGFQGREFDIVI 687
Query: 569 ISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEY 628
+S VRS+ +GF+ D RR+NVA+TRA+R C+V + +T+ R ++ +E++ +
Sbjct: 688 MSCVRSSEHNGIGFVEDERRLNVAITRAKRALCVVGNIKTL-------RQVKVWEDYINW 740
Query: 629 LS 630
L+
Sbjct: 741 LT 742
>gi|170593003|ref|XP_001901254.1| Regulator of nonsense transcripts 1 homolog [Brugia malayi]
gi|158591321|gb|EDP29934.1| Regulator of nonsense transcripts 1 homolog, putative [Brugia
malayi]
Length = 1112
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 156/492 (31%), Positives = 241/492 (48%), Gaps = 68/492 (13%)
Query: 187 DIAFK---------PFNSNLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEV 237
DI FK P L+HSQ A+ L + + ++ GPPGTGKT T I+ V
Sbjct: 416 DIIFKVSLPKRFSVPGLPELNHSQVHAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLV 474
Query: 238 KR-GSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVLRGDNSS 296
K+ ++L CA SNIAVD + E++ +++VRL +R LD+ V +
Sbjct: 475 KQTNGQVLVCAPSNIAVDQLAEKIHRTGLKVVRLCAKSR-------ETLDSPV-----AF 522
Query: 297 LASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLS-KEERKRQQLAV---TDVIKNADV 352
LA + +++AL+G + + +++++E+ L+ +ER+ + L + ++ ADV
Sbjct: 523 LA--LHNQLRALHG----AAELHKLQQLKEEMGELADADERRFRALRIAKECQLLTAADV 576
Query: 353 VLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQS 411
+ T A +L + V+IDE+ QA E +A++ G R +L GDH QL P +
Sbjct: 577 ICCTCVSAADSRLSHMRIKCVLIDESTQATEPEVMVAVVCGVRQLVLVGDHCQLGPVIMC 636
Query: 412 VEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR 471
+A K GL ++LFERL L G+ L VQYRMH + ++ S Y ++ + K
Sbjct: 637 KKAAKAGLSQSLFERLV-LLGNRPIR-LQVQYRMHPALSSFPSNVFYEGSLQNGVTEGKH 694
Query: 472 TS---------------STEPTLLLID-----------IAGC-DMEEKKDEEDSTMNEGE 504
S S E L+ ID C EE S +N E
Sbjct: 695 LSMKRKEVINLSHMCFISGERQLIGIDWQWPVPDKPMMFWSCYGQEELSSSGTSFLNRTE 754
Query: 505 AEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLLKILRSKDDKLK-NMEVSTVDGF 559
A A R +++G+ IGIITPY Q V ++ + KL MEV+ VD F
Sbjct: 755 AANVEKLATRFLKAGLKPEQIGIITPYEGQRSYIVQFMQTQGALHSKLYLEMEVANVDAF 814
Query: 560 QGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLI 619
QGREK+ II++ VRSN + +GFL+D RR+NVA+TRA+ +V + + +S L+
Sbjct: 815 QGREKDIIIVTCVRSNDHQGIGFLNDSRRLNVALTRAKFGLIIVGNAKVLSRHPLWNYLL 874
Query: 620 EYFEEHAEYLSG 631
F+E + G
Sbjct: 875 SMFKEKGCLVEG 886
>gi|281208251|gb|EFA82429.1| hypothetical protein PPL_04854 [Polysphondylium pallidum PN500]
Length = 799
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 147/454 (32%), Positives = 234/454 (51%), Gaps = 69/454 (15%)
Query: 187 DIAFKP-FNS-NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEII-----LQE--- 236
D++ P FN ++ SQ++AI ++ + V ++ GPPGTGK+ T + ++ ++E
Sbjct: 323 DVSIPPDFNEWRMNSSQRNAILSSVKRR-VSLIQGPPGTGKSATAINLVRLLCHIKEKLS 381
Query: 237 ------VKRGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPARLLPQVLESALDAQVL 290
V KIL + +N VDN+++ L+ + V+++RLGH + + P +L + LD
Sbjct: 382 ANDPGGVAASQKILVTSYTNTGVDNLLDGLLKYNVKVLRLGHTSSVRPDLLNATLDHH-- 439
Query: 291 RGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNA 350
L+ I++ K+ N N R+ + +L +
Sbjct: 440 ------LSEAIKQYEKSPNYN--PANIANIERDTKSKL------------------LSQV 473
Query: 351 DVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGS-RCILAGDHLQLPPTV 409
+V+ TT + L N F +VI+DEA+QA E A + LLK S + L GD QL PT+
Sbjct: 474 NVICTTCIASGHPILTNERFSIVIVDEASQATEPAILVPLLKQSEQLFLFGDQNQLSPTI 533
Query: 410 QSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAH---- 465
+ EAE GL LF+RLA+ D +L QYRMH ++ + +K +Y+ K+K
Sbjct: 534 FTKEAEDGGLSIGLFQRLAN---DITPFLLEEQYRMHSKLLEFPNKYIYDGKLKTGIDDK 590
Query: 466 ----PSGVKRTSSTEPTLLLIDIAGCDMEEKKDEED-STMNEGEAEVAMAHAKRLIQSG- 519
P G P + +++ G K+D + S MN EA+ + K +++
Sbjct: 591 DRQIPRGFDWPREQCP-IAFVNVVG-----KEDINNYSYMNMPEAKEIVRILKAMVKENQ 644
Query: 520 -VHASDIGIITPYAAQVVLL-KILRSKDDKLKNMEVSTVDGFQGREKEAIIISMVRSNSK 577
+ GIITPY++Q L+ +LR KL V+TVD FQGREKE I++S VRSN
Sbjct: 645 DLTTDSFGIITPYSSQAKLICNLLRPDFRKLPT--VATVDSFQGREKEIILVSTVRSNLG 702
Query: 578 KEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSS 611
VGFL+D RR+NV++TRA+R +V + +T+ S
Sbjct: 703 GRVGFLNDWRRLNVSLTRAKRGMIIVGNKQTLES 736
>gi|294657547|ref|XP_002770466.1| DEHA2E12430p [Debaryomyces hansenii CBS767]
gi|199432775|emb|CAR65809.1| DEHA2E12430p [Debaryomyces hansenii CBS767]
Length = 985
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 166/555 (29%), Positives = 269/555 (48%), Gaps = 52/555 (9%)
Query: 107 PALGQGVVYRLKDS---SITVAFDDI---PEEGLNSPLRLEKLANEVTYRRMKDALIQLS 160
P G G + RL ++ T+ + P L + E + +Y RM+ A+ +
Sbjct: 334 PWQGNGYIVRLPNAYQEEFTLELNPSKLQPPTHLATDFTAEFVWKGTSYERMQQAMKDFA 393
Query: 161 KGVQNGPAAGLIPVLFGEQKPTVLKKDIAFK---PFNSNLDHSQKDAISKALSSKNVFML 217
++ + +L E P + K P + L+ SQ +A+ L + + ++
Sbjct: 394 TEKESVSSYIYHKILGHEVAPIEFDIKLPNKFSHPNLTELNMSQTNAVRSVLQ-RPLSLI 452
Query: 218 HGPPGTGKTTTVVEIILQEVKRG-SKILACAASNIAVDNIVERLVPHRVRLVRLGHPARL 276
GPPGTGKT T I+ K KIL CA SN+AVD++ ++L ++++RL +R
Sbjct: 453 QGPPGTGKTVTSATIVYHLSKLSKEKILVCAPSNVAVDHLADKLNLLGLKVIRLTAKSR- 511
Query: 277 LPQVLESALDAQVLRGDNSSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEER 336
+ +ES+++ + +L + + K K KL++ ++ EL LS E
Sbjct: 512 --EDVESSVN-------DLALHNIVNKSAKGELKKLIR---------LRNELGELS-ESD 552
Query: 337 KRQQLAVT-----DVIKNADVVLTTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALL 391
RQ + +T ++ DVV T GA ++L N F V+IDE+ QA E I ++
Sbjct: 553 SRQLIKLTRSSEMKILNKCDVVCCTCVGAGDKRLSNLKFRTVLIDESTQASEPEVLIPIV 612
Query: 392 KGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIM 450
KG++ IL GDH QL P + +A GL ++LFERL L V L VQYRM+ +
Sbjct: 613 KGAKQVILVGDHQQLGPVILDKKAGDAGLKQSLFERLVVL--GHVPIRLEVQYRMNPCLS 670
Query: 451 NWSSKQLYNSKIKAHPSGVKR--TSSTEPTLLL----IDIAGCDMEEKKDEEDSTMNEGE 504
+ S Y ++ + +R +S P +L + A EE +S +N E
Sbjct: 671 EFPSNMFYEGSLQNGVTAKQRLIENSIFPWPVLDNPMMFWANYGREEISGSGNSFLNRVE 730
Query: 505 AEVAMAHAKRLIQSGVHASDIGIITPYAAQ---VVLLKILRSKDDKLKN----MEVSTVD 557
A +L + G+ S IG+ITPY Q +V + S +LK +E+++VD
Sbjct: 731 AMNVEKIITKLFKDGIEPSQIGVITPYEGQRAYIVQYMSMNSTLTELKEKYLEVEITSVD 790
Query: 558 GFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKR 617
FQGREK+ II+S VR+N + +GFLSD RR+NVA+TRA+ ++ + + +
Sbjct: 791 AFQGREKDFIILSCVRANDSQVIGFLSDPRRLNVALTRAKYGLVILGNPRALCRNTLWNH 850
Query: 618 LIEYFEEHAEYLSGS 632
L+ +F E + GS
Sbjct: 851 LLIHFREKGCLVDGS 865
>gi|242011006|ref|XP_002426248.1| regulator of nonsense transcripts, putative [Pediculus humanus
corporis]
gi|212510311|gb|EEB13510.1| regulator of nonsense transcripts, putative [Pediculus humanus
corporis]
Length = 1108
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 142/454 (31%), Positives = 226/454 (49%), Gaps = 40/454 (8%)
Query: 196 NLDHSQKDAISKALSSKNVFMLHGPPGTGKTTTVVEIILQEVKRGS-KILACAASNIAVD 254
+L+ SQ A+ +AL + + ++ GPPGTGKT T I+ ++ + +L CA SNIAVD
Sbjct: 463 DLNRSQVYAVKQALQ-RPLSLIQGPPGTGKTVTSATIVYHLARQPTGAVLVCAPSNIAVD 521
Query: 255 NIVERLVPHRVRLVRLGHPARLLPQVLESALDAQV--LRGDNSSLASDIRKEMKALNGKL 312
+ E++ +++VRL +R A+D+ V L N D ++K L +
Sbjct: 522 QLTEKIHRTGLKVVRLCAKSR-------EAIDSPVSFLALHNQIRNMDSNTDLKKL--QQ 572
Query: 313 LKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGAVSRKLDNTSFDL 372
LK + +K R L K K ++++ ADV+ T GA +L F
Sbjct: 573 LKDETGELSSSDEKRYRMLKKSSEK-------EMLEAADVICCTCVGAGDPRLARLKFHS 625
Query: 373 VIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVEAEKKGLGRTLFERLADLY 431
++IDE+ Q+ E C + ++ G+R IL GDH QL P V +A + GL ++LFERL L
Sbjct: 626 ILIDESMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL- 684
Query: 432 GDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKR---------TSSTEPTLLLI 482
L VQYRMH + + S Y ++ +R ++ +P L +
Sbjct: 685 -GIRPYRLEVQYRMHPELSRFPSDFFYEGSLQNGVCSEERKLAKVDFPWPANDKPMLFYV 743
Query: 483 DIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLIQSGVHASDIGIITPYAAQ----VVLL 538
EE S +N EA + +++G+ IG+ITPY Q V +
Sbjct: 744 TTG---QEEIAGSGTSYLNRTEASNVEKIVTKFLRAGIKPEQIGLITPYEGQRAYLVQFM 800
Query: 539 KILRSKDDKL-KNMEVSTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 597
+ S KL + +EV++VD FQGREK+ II+S VRSN +GFL+D RR+NVA+TRA+
Sbjct: 801 QYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNELLGIGFLNDPRRLNVALTRAK 860
Query: 598 RQCCLVCDTETVSSDGFLKRLIEYFEEHAEYLSG 631
++ + + +S L+ +++E + G
Sbjct: 861 YGIIIIGNPKVLSKQPLWNHLLNFYKEQKVLVEG 894
>gi|145349529|ref|XP_001419184.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579415|gb|ABO97477.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 479
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 140/409 (34%), Positives = 199/409 (48%), Gaps = 77/409 (18%)
Query: 239 RGSKILACAASNIAVDNIVERLVPHRVRLVRLGHPAR----LLPQVLESALDAQVLRGDN 294
R S IL + SNIAVDN+V+ L VR+ R+G P L+P ++ES
Sbjct: 6 RTSPILCTSDSNIAVDNLVDGLARAGVRVARIGRPEAVRQDLMPYMIES----------- 54
Query: 295 SSLASDIRKEMKALNGKLLKTKDKNTRREIQKELRTLSKEERKRQQLAVTDVIKNADVVL 354
+ D++ R +++Q+ A+T+ ++ A+V+
Sbjct: 55 ------------------IAGIDQDCRWS------------KQQQRSAITNALRQAEVIC 84
Query: 355 TTLTGAVSRKLDNTSFDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTVQSVE 413
T GA S L+ SF +IDEA QA E A I L KG + +L GD QLPPT+ S E
Sbjct: 85 ATCAGAGSDILEKYSFQACLIDEATQATEPATVIPLTKGCKQVVLIGDQNQLPPTIISRE 144
Query: 414 AEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEHIMNWSSKQLYNSKIKAHPSGVKRTS 473
AE GLG +LFER + T ML VQYRMH I + SK Y ++ SG +
Sbjct: 145 AEAAGLGESLFERF--IRAGIRTYMLKVQYRMHPAIALFPSKTFYKGELL---SGTPPSQ 199
Query: 474 STEPTLLLIDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLI--------QSGVHASDI 525
P + M EE + ++G ++ A +R++ Q V DI
Sbjct: 200 RRAPVGFDWPVPAVPMAFVNVEEGAERSDGSSQTNPAEIQRVVNIVKKLAGQHEVLPGDI 259
Query: 526 GIITPYAAQV-VLLKILR------------SKDDKLKNMEVSTVDGFQGREKEAIIISMV 572
G++TPY+AQ + KILR + +K +EV+TVDGFQGREKE I+ S
Sbjct: 260 GVVTPYSAQARAIKKILRGNAPERTRFDAPADPTSMKAVEVATVDGFQGREKEVIVFSCT 319
Query: 573 RSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSD-----GFLK 616
R+N VGFL+D RR+NV +TRA+R +V +T+ D G+LK
Sbjct: 320 RANMNGNVGFLADTRRVNVMLTRAKRGLIIVGHMKTLQQDEIVWKGWLK 368
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.131 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,044,918,482
Number of Sequences: 23463169
Number of extensions: 366110844
Number of successful extensions: 1541533
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3718
Number of HSP's successfully gapped in prelim test: 3705
Number of HSP's that attempted gapping in prelim test: 1510924
Number of HSP's gapped (non-prelim): 14919
length of query: 637
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 488
effective length of database: 8,863,183,186
effective search space: 4325233394768
effective search space used: 4325233394768
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)