Your job contains 1 sequence.
>006654
MDTDIDDTCKAKDEEKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGK
SGTKVQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCIS
RSVKRIEHEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLG
PLDTLPHGSFGQKNPDAKIQLGIMKFLKKVDAPSNTGSTASSTQDPVPPQITEEKNSCLE
GQEITSLLSDAAGEEVKGTENPEVASVNQNGSSSDVPTLAFPSLSTSDFQFNNEKASDVI
IEKVEEFVNKLGNARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGG
LCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPL
CGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEKLSKG
CNEDIRLEPSVSQDHSEDVHGNYISTGDKIKRDGGHEYEQSKKCKTQNEVGTDINLSRAA
NLSADNEKIGVSTSKAWGSWAQALYRTAMYPERHKDDLLEISDDVVVLNDLYPKVHPSDN
LPPGTLLCICLSSINKCVKFSFLIIGSETHFGAVTI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006654
(636 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2179122 - symbol:APTX "APRATAXIN-like" species... 799 5.8e-170 3
POMBASE|SPAC23C11.04c - symbol:pnk1 "DNA kinase/phosphata... 145 8.8e-07 1
WB|WBGene00009010 - symbol:F21D5.5 species:6239 "Caenorha... 128 6.5e-05 1
UNIPROTKB|E2R0U3 - symbol:PNKP "Uncharacterized protein" ... 121 0.00056 1
DICTYBASE|DDB_G0281229 - symbol:pnkp "putative bifunction... 121 0.00059 1
UNIPROTKB|F1RHU1 - symbol:PNKP "Uncharacterized protein" ... 119 0.00093 1
>TAIR|locus:2179122 [details] [associations]
symbol:APTX "APRATAXIN-like" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006790 "sulfur compound metabolic
process" evidence=IDA] [GO:0009150 "purine ribonucleotide metabolic
process" evidence=IDA] [GO:0047627 "adenylylsulfatase activity"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0006310 "DNA
recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR011146
InterPro:IPR011598 InterPro:IPR015880 Pfam:PF00010 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS50888 PROSITE:PS51084 SMART:SM00353
SMART:SM00355 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 Gene3D:3.30.428.10 InterPro:IPR001310
SUPFAM:SSF54197 PROSITE:PS00892 InterPro:IPR019808 eggNOG:NOG278510
KO:K10863 PANTHER:PTHR12486 GO:GO:0006790 EMBL:AL161746
IPI:IPI00539681 PIR:T48153 RefSeq:NP_195751.1 UniGene:At.54671
ProteinModelPortal:Q9M041 SMR:Q9M041 PRIDE:Q9M041
EnsemblPlants:AT5G01310.1 GeneID:830940 KEGG:ath:AT5G01310
GeneFarm:3073 TAIR:At5g01310 HOGENOM:HOG000083464 InParanoid:Q9M041
OMA:GHEGNLQ PhylomeDB:Q9M041 ProtClustDB:CLSN2687115
BioCyc:ARA:AT5G01310-MONOMER Genevestigator:Q9M041 GO:GO:0047627
GO:GO:0009150 InterPro:IPR002589 Pfam:PF01661 PROSITE:PS51154
Uniprot:Q9M041
Length = 912
Score = 799 (286.3 bits), Expect = 5.8e-170, Sum P(3) = 5.8e-170
Identities = 164/253 (64%), Positives = 196/253 (77%)
Query: 259 TENPEVASVNQNGSSSDVPTLAFPSLSTSDFQFNNEKASDVIIEKVEEFVNKLGNARLVL 318
T N V+ V GS+ VPTLAFPS+ST+DFQF+ EKASD+I+EK EEF++KLG ARLVL
Sbjct: 439 TANVRVSPVKL-GSADIVPTLAFPSISTADFQFDLEKASDIIVEKAEEFLSKLGTARLVL 497
Query: 319 VDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGG 378
VDL++GSKILSLV+AKA+QK+I+ KFFTFVGDIT+L + GGL CNVIANA NWRLKPGG
Sbjct: 498 VDLSRGSKILSLVKAKASQKNIDSAKFFTFVGDITKLRSEGGLHCNVIANATNWRLKPGG 557
Query: 379 GGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMN 438
GGVNAAIF AAGP LE AT RA +L PG +V+VPLPST PL EG+THVIHVLGPNMN
Sbjct: 558 GGVNAAIFKAAGPDLETATRVRANTLLPGKAVVVPLPSTCPLHNAEGITHVIHVLGPNMN 617
Query: 439 PRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEKLSKGCNEDIRLEPSVSQDHSED 498
P RP+ L+ DY KGC+ LR+AYTSLFEGFLS+V+ Q KL K ++ + S +D ED
Sbjct: 618 PNRPDNLNNDYTKGCKTLREAYTSLFEGFLSVVQDQSKLPKRSSQTA-VSDS-GEDIKED 675
Query: 499 VHGN--YISTGDK 509
N Y + DK
Sbjct: 676 SERNKKYKGSQDK 688
Score = 734 (263.4 bits), Expect = 5.8e-170, Sum P(3) = 5.8e-170
Identities = 136/211 (64%), Positives = 174/211 (82%)
Query: 14 EEKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASS 73
E K KQI+V+++G PGSGKSTFC+ MRSS RPW+RICQD +N GK+GTK QCL A+
Sbjct: 221 EADKAKQIVVLLIGPPGSGKSTFCDTAMRSSHRPWSRICQDIVNNGKAGTKAQCLKMATD 280
Query: 74 ALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQ 133
+L++GKSVF+DRCNL+REQR++F+KLGGPE +VHAVVL+LPA++CISRSVKR HEGNLQ
Sbjct: 281 SLREGKSVFIDRCNLDREQRSEFIKLGGPEFEVHAVVLELPAQVCISRSVKRTGHEGNLQ 340
Query: 134 GGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTLPHGSFGQK 193
GG+AAAVVN+MLQ KELPK++EGFSRI C ++ DV A++ Y+ LGP+DTLP G FG+K
Sbjct: 341 GGRAAAVVNKMLQSKELPKVNEGFSRIMFCYSDADVDNAVNMYNKLGPMDTLPSGCFGEK 400
Query: 194 NPDAKIQLGIMKFLKKVDA-PSNTGSTASST 223
D K Q GIMKF KKV A P+++ + A++T
Sbjct: 401 KLDTKSQPGIMKFFKKVSALPASSSNEATNT 431
Score = 157 (60.3 bits), Expect = 5.8e-170, Sum P(3) = 5.8e-170
Identities = 36/89 (40%), Positives = 52/89 (58%)
Query: 506 TGDKIKRDGGHEYEQSKKCKTQNEVGTDINLSRAANLSADNEKIGVSTSKAWGSWAQALY 565
+G+ IK D E++KK K + NL + +L D G SK W +WA AL+
Sbjct: 668 SGEDIKEDS----ERNKKYKGSQDKAVTNNLE-SESLE-DTRGSGKKMSKGWNTWALALH 721
Query: 566 RTAMYPERHKDDLLEISDDVVVLNDLYPK 594
AM+PERH++ +LE D++VV+ND YPK
Sbjct: 722 SIAMHPERHENVVLEYLDNIVVINDQYPK 750
>POMBASE|SPAC23C11.04c [details] [associations]
symbol:pnk1 "DNA kinase/phosphatase Pnk1" species:4896
"Schizosaccharomyces pombe" [GO:0000718 "nucleotide-excision
repair, DNA damage removal" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046403 "polynucleotide
3'-phosphatase activity" evidence=IDA] [GO:0046404 "ATP-dependent
polydeoxyribonucleotide 5'-hydroxyl-kinase activity" evidence=IDA]
PomBase:SPAC23C11.04c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR Gene3D:3.40.50.1000 InterPro:IPR023214
SUPFAM:SSF56784 GO:GO:0046403 GO:GO:0000718 GO:GO:0046404
InterPro:IPR006549 TIGRFAMs:TIGR01662 eggNOG:COG0241
InterPro:IPR013954 Pfam:PF08645 PIR:T38242 RefSeq:NP_593635.2
STRING:O13911 EnsemblFungi:SPAC23C11.04c.1 GeneID:2542032
HOGENOM:HOG000182000 OrthoDB:EOG47M57H NextBio:20803110
InterPro:IPR015636 InterPro:IPR006551 PANTHER:PTHR12083
TIGRFAMs:TIGR01664 Uniprot:O13911
Length = 408
Score = 145 (56.1 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 43/147 (29%), Positives = 71/147 (48%)
Query: 15 EKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSA 74
+K Q +V++VG P SGKST E + + + R+ QD + TK +C+ +A A
Sbjct: 251 KKSEHQEIVVLVGFPSSGKSTLAESQIVTQG--YERVNQDILK-----TKSKCIKAAIEA 303
Query: 75 LKKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQ 133
LKK KSV +D N E R ++ + E+ + + L +L +V R H Q
Sbjct: 304 LKKEKSVVIDNTNPTIESRKMWIDIAQEFEIPIRCIHLQSSEELARHNNVFRYIHHNQKQ 363
Query: 134 GGKAAAVVNRMLQKKELPKLSEGFSRI 160
+ A N + ++P + EGF+ +
Sbjct: 364 LPEIA--FNSFKSRFQMPTVEEGFTNV 388
>WB|WBGene00009010 [details] [associations]
symbol:F21D5.5 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0019915 "lipid storage" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] GO:GO:0008340 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 Gene3D:3.40.50.1000 InterPro:IPR023214
SUPFAM:SSF56784 GO:GO:0019915 GO:GO:0003690
GeneTree:ENSGT00570000079163 InterPro:IPR006549 TIGRFAMs:TIGR01662
eggNOG:COG0241 InterPro:IPR013954 Pfam:PF08645 InterPro:IPR015636
InterPro:IPR006551 PANTHER:PTHR12083 TIGRFAMs:TIGR01664
HOGENOM:HOG000031466 KO:K08073 OMA:SWQRCVT EMBL:Z54271
EMBL:AF292046 PIR:T21197 RefSeq:NP_501503.1 UniGene:Cel.19445
ProteinModelPortal:Q19683 SMR:Q19683 PaxDb:Q19683 PRIDE:Q19683
EnsemblMetazoa:F21D5.5.1 EnsemblMetazoa:F21D5.5.2 GeneID:177681
KEGG:cel:CELE_F21D5.5 UCSC:F21D5.5 CTD:177681 WormBase:F21D5.5
InParanoid:Q19683 NextBio:897908 Uniprot:Q19683
Length = 407
Score = 128 (50.1 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 43/148 (29%), Positives = 78/148 (52%)
Query: 16 KKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSAL 75
K ++ +++MVG PGSGKSTF + M + + +DTI GT +C+ + S L
Sbjct: 246 KSSEKEIILMVGFPGSGKSTFAK--MLGHQHDYKIVNRDTI-----GTWQKCVAATRSYL 298
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKL-CISRSVK-RIEHEGNLQ 133
GKSV +D + + E R ++ + E+ V ++ + +++ R+ + N
Sbjct: 299 ADGKSVVIDNTSPDLESRKRYIDVA-KELGVPIRCFEMNCSMEHAQHNIRFRVLTDDN-- 355
Query: 134 GGKAAAVVNRMLQKKEL-PKLSEGFSRI 160
+ +++V R+ + K + P LSEGFS+I
Sbjct: 356 AAEISSMVLRIHKGKYVEPTLSEGFSQI 383
>UNIPROTKB|E2R0U3 [details] [associations]
symbol:PNKP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019201 "nucleotide kinase activity"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0046404 "ATP-dependent
polydeoxyribonucleotide 5'-hydroxyl-kinase activity" evidence=IEA]
[GO:0046403 "polynucleotide 3'-phosphatase activity" evidence=IEA]
[GO:0042769 "DNA damage response, detection of DNA damage"
evidence=IEA] InterPro:IPR000253 InterPro:IPR008984 GO:GO:0006979
GO:GO:0005730 Gene3D:3.40.50.1000 InterPro:IPR023214
SUPFAM:SSF56784 GO:GO:0006281 Gene3D:2.60.200.20 SUPFAM:SSF49879
GeneTree:ENSGT00570000079163 GO:GO:0046403 GO:GO:0046404
GO:GO:0042769 InterPro:IPR006549 TIGRFAMs:TIGR01662
InterPro:IPR013954 Pfam:PF08645 GO:GO:0019201 InterPro:IPR015636
InterPro:IPR006551 PANTHER:PTHR12083 TIGRFAMs:TIGR01664 CTD:11284
KO:K08073 OMA:SWQRCVT InterPro:IPR006550 TIGRFAMs:TIGR01663
EMBL:AAEX03000795 EMBL:AAEX03000794 RefSeq:XP_541488.2
Ensembl:ENSCAFT00000005610 GeneID:484373 KEGG:cfa:484373
Uniprot:E2R0U3
Length = 521
Score = 121 (47.7 bits), Expect = 0.00056, P = 0.00056
Identities = 41/141 (29%), Positives = 69/141 (48%)
Query: 22 LVIMVGAPGSGKSTFC-EHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+V+ VG PG+GKSTF EH++ + + + +DT+ G+ +C+T+ +ALK+ K
Sbjct: 367 VVVAVGFPGAGKSTFLQEHLVSAG---YVHVNRDTL-----GSWQRCVTTCENALKQRKR 418
Query: 81 VFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRI-EHEGNLQGGKAAA 139
V +D N + R ++K + V L +R R E G+ +
Sbjct: 419 VVIDNTNPDPPTRARYIKCAR-DAGVPCRCFLFSTTLEHARHNNRFREMTGSSHAPVSDV 477
Query: 140 VVNRMLQKKELPKLSEGFSRI 160
V+ ++ E P L+EGFS I
Sbjct: 478 VMYGYRKQFEAPTLAEGFSAI 498
>DICTYBASE|DDB_G0281229 [details] [associations]
symbol:pnkp "putative bifunctional polynucleotide
phosphatase/kinase" species:44689 "Dictyostelium discoideum"
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=ISS] [GO:0005958 "DNA-dependent protein
kinase-DNA ligase 4 complex" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0046939 "nucleotide
phosphorylation" evidence=ISS] [GO:0046403 "polynucleotide
3'-phosphatase activity" evidence=ISS] [GO:0042769 "DNA damage
response, detection of DNA damage" evidence=ISS] [GO:0019201
"nucleotide kinase activity" evidence=ISS] [GO:0009314 "response to
radiation" evidence=ISS] [GO:0006979 "response to oxidative stress"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006261
"DNA-dependent DNA replication" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0004519
"endonuclease activity" evidence=ISS] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003034 Pfam:PF02037 PROSITE:PS50800
SMART:SM00513 dictyBase:DDB_G0281229 GO:GO:0005524 GO:GO:0006979
GenomeReviews:CM000152_GR GO:GO:0003677 Gene3D:3.40.50.1000
InterPro:IPR023214 SUPFAM:SSF56784 EMBL:AAFI02000040 GO:GO:0006261
Gene3D:1.10.720.30 GO:GO:0004519 GO:GO:0009314 GO:GO:0046403
GO:GO:0005958 GO:GO:0006303 GO:GO:0042769 InterPro:IPR006549
TIGRFAMs:TIGR01662 eggNOG:COG0241 InterPro:IPR013954 Pfam:PF08645
GO:GO:0019201 InterPro:IPR015636 InterPro:IPR006551
PANTHER:PTHR12083 TIGRFAMs:TIGR01664 KO:K08073 RefSeq:XP_640898.1
ProteinModelPortal:Q54U78 EnsemblProtists:DDB0220676 GeneID:8622956
KEGG:ddi:DDB_G0281229 InParanoid:Q54U78 OMA:GRKFPTG Uniprot:Q54U78
Length = 544
Score = 121 (47.7 bits), Expect = 0.00059, P = 0.00059
Identities = 30/78 (38%), Positives = 45/78 (57%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+VI VG P +GKSTF + +A I QDT+ K QCL +A++AL +GKSV
Sbjct: 386 MVISVGYPAAGKSTFARKYFGPAG--YAIINQDTLKD-----KAQCLKAANAALAQGKSV 438
Query: 82 FLDRCNLEREQRTDFVKL 99
+D N ++ R +++ L
Sbjct: 439 IIDNTNPTKDVRAEYLAL 456
>UNIPROTKB|F1RHU1 [details] [associations]
symbol:PNKP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046404 "ATP-dependent polydeoxyribonucleotide
5'-hydroxyl-kinase activity" evidence=IEA] [GO:0046403
"polynucleotide 3'-phosphatase activity" evidence=IEA] [GO:0042769
"DNA damage response, detection of DNA damage" evidence=IEA]
[GO:0019201 "nucleotide kinase activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR000253 InterPro:IPR008984 GO:GO:0006979 GO:GO:0005730
Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
GO:GO:0006281 Gene3D:2.60.200.20 SUPFAM:SSF49879
GeneTree:ENSGT00570000079163 GO:GO:0046403 GO:GO:0046404
GO:GO:0042769 InterPro:IPR006549 TIGRFAMs:TIGR01662
InterPro:IPR013954 Pfam:PF08645 GO:GO:0019201 InterPro:IPR015636
InterPro:IPR006551 PANTHER:PTHR12083 TIGRFAMs:TIGR01664 OMA:SWQRCVT
InterPro:IPR006550 TIGRFAMs:TIGR01663 EMBL:CU694867
Ensembl:ENSSSCT00000003550 Uniprot:F1RHU1
Length = 522
Score = 119 (46.9 bits), Expect = 0.00093, P = 0.00093
Identities = 39/141 (27%), Positives = 70/141 (49%)
Query: 22 LVIMVGAPGSGKSTFC-EHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+V+ VG PG+GKSTF EH++ + + + +DT+ G+ +C+T+ +ALK+ K
Sbjct: 368 VVVAVGFPGAGKSTFLREHLVSAG---YVHVNRDTL-----GSWQRCVTTCEAALKQRKR 419
Query: 81 VFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
V +D N + + R ++K + V A L +R R + + +
Sbjct: 420 VVIDNTNPDLQSRARYIKCAR-DAGVPCRCFLFSASLEQARHNNRFREMTDPSHVPVSDI 478
Query: 141 VNRMLQKK-ELPKLSEGFSRI 160
V +K+ E P L+EGF+ +
Sbjct: 479 VIYGYRKQFEAPTLAEGFAAV 499
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.132 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 636 636 0.00092 120 3 11 23 0.45 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 618 (66 KB)
Total size of DFA: 341 KB (2171 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 64.13u 0.14s 64.27t Elapsed: 00:00:03
Total cpu time: 64.13u 0.14s 64.27t Elapsed: 00:00:03
Start: Thu May 9 22:34:19 2013 End: Thu May 9 22:34:22 2013