BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006654
(636 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359481176|ref|XP_002270443.2| PREDICTED: transcription factor bHLH140-like [Vitis vinifera]
Length = 734
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/586 (66%), Positives = 459/586 (78%), Gaps = 28/586 (4%)
Query: 11 AKDEEKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTS 70
+K+ E + K I+V+++GAPGSGKSTFCEHV+RSS RPW R+CQDTI GK+GTK QCL S
Sbjct: 7 SKEGEGQGKPIVVLLMGAPGSGKSTFCEHVIRSSTRPWVRVCQDTIGNGKAGTKSQCLKS 66
Query: 71 ASSALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEG 130
A+SAL+ GKSVF+DRCNL+REQR +FVKLG P+V++HAVVLDLPA+LCISRSVKR HEG
Sbjct: 67 ATSALEDGKSVFIDRCNLDREQRAEFVKLGSPQVEMHAVVLDLPAQLCISRSVKRTGHEG 126
Query: 131 NLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTLPHGSF 190
NLQGGKAAAVVNRMLQKKELPKLSEGF RIT CQN++DVQ AL+TYS L LDTLP G F
Sbjct: 127 NLQGGKAAAVVNRMLQKKELPKLSEGFHRITFCQNDSDVQTALNTYSALSHLDTLPPGCF 186
Query: 191 GQKNPDAKIQLGIMKFLKKVDAPSNTGSTASSTQDPVPPQITEEKNSCLEGQEITSLLSD 250
GQKNPDAKIQLGIMKFLKKV+ P N G SS S
Sbjct: 187 GQKNPDAKIQLGIMKFLKKVEVPVNVGEDISS--------------------------SS 220
Query: 251 AAGEEVKGTENPEVASVNQNGSSSDVPTLAFPSLSTSDFQFNNEKASDVIIEKVEEFVNK 310
+E+KG E+ V SV+ SS D+PTLAFPS+ST+DFQFN+EKA+D+I+EKVEEFVNK
Sbjct: 221 GNAKEIKGGEDIVVHSVDGTVSSKDIPTLAFPSISTADFQFNHEKAADIILEKVEEFVNK 280
Query: 311 LGNARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAA 370
+ NARLVLVDL+ GSKILSLVRAKAAQ++I+ KFFTFVGDITRLY+ GGL CN IANAA
Sbjct: 281 VENARLVLVDLSHGSKILSLVRAKAAQRNIDSNKFFTFVGDITRLYSKGGLRCNAIANAA 340
Query: 371 NWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVI 430
NWRLKPGGGG NAAIFSAAGP LEV T +RA SL PG +++VPLPSTSPL REGVTHVI
Sbjct: 341 NWRLKPGGGGANAAIFSAAGPELEVETKKRAGSLIPGKALVVPLPSTSPLFSREGVTHVI 400
Query: 431 HVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEKLSKGCNEDIRLEPS 490
HVLGPNMN +RPNCL+ DYVKG ++LR+AYTSLFEGF SI+ +Q L +G +E++R E S
Sbjct: 401 HVLGPNMNRQRPNCLNNDYVKGSKVLREAYTSLFEGFASIMNTQGNLLEGSSENLRSELS 460
Query: 491 VSQDHSEDVHGNYISTGD-KIKRDGGHEYEQSKKCK-TQNEVGTDINLSRAANLSADNEK 548
VSQDH + H + D KIKR G +E E SKKCK Q+E D S+ +NEK
Sbjct: 461 VSQDHFKGNHIKNVPNHDQKIKRVGVYESETSKKCKGFQDEHEFDCTESKEGKDKLNNEK 520
Query: 549 IGVSTSKAWGSWAQALYRTAMYPERHKDDLLEISDDVVVLNDLYPK 594
IG + +K WGSWAQ+LY AM+PE+HKD+L+EISDDVVVLNDLYPK
Sbjct: 521 IGRNMTKTWGSWAQSLYHIAMHPEKHKDNLIEISDDVVVLNDLYPK 566
>gi|147867251|emb|CAN83280.1| hypothetical protein VITISV_005888 [Vitis vinifera]
Length = 864
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/604 (65%), Positives = 466/604 (77%), Gaps = 25/604 (4%)
Query: 15 EKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSA 74
E + K I+V+++GAPGSGKSTFCEHV+RSS RPW R+CQDTI GK+GTK QCL SA+SA
Sbjct: 101 EGQGKPIVVLLMGAPGSGKSTFCEHVIRSSTRPWVRVCQDTIGNGKAGTKSQCLKSATSA 160
Query: 75 LKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
L+ GKSVF+DRCNL+REQR +FVKLG P+V++HAVVLDLPA+LCISRSVKR HEGNLQG
Sbjct: 161 LEDGKSVFIDRCNLDREQRAEFVKLGSPQVEMHAVVLDLPAQLCISRSVKRTGHEGNLQG 220
Query: 135 GKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTLPHGSFGQKN 194
GKAAAVVNRMLQKKELPKLSEGF RIT CQN++DVQ AL+TYS L LDTLP G FGQKN
Sbjct: 221 GKAAAVVNRMLQKKELPKLSEGFHRITFCQNDSDVQTALNTYSALSHLDTLPPGCFGQKN 280
Query: 195 PDAKIQLGIMKFLKKVDAPSNTGSTASSTQDPVPPQITEEKNSCLEGQEITSLLSDAAGE 254
PDAKIQLGIMKFLKKV+ P N G A+ + P+ QIT+ +SC + E S S +
Sbjct: 281 PDAKIQLGIMKFLKKVEVPVNVGPDANFPKHPLSTQITKXXDSCCKQPEDIS-SSSGNXK 339
Query: 255 EVKGTENPEVASVNQNGSSSDVPTLAFPSLSTSDFQFNNEKASDVIIEKVEEFVNKLGNA 314
+KG E+ V SV+ SS D+PTLAFPS+ST+DFQFN+EKA+D+I+EKVEEFVNK+ NA
Sbjct: 340 XIKGGEDIVVHSVDGTVSSKDIPTLAFPSISTADFQFNHEKAADIILEKVEEFVNKVENA 399
Query: 315 RLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAAN--- 371
RLVLVDL+ GSKILSLVRAKAAQ++I+ KFFTFVGDITRLY+ GGL CN IANAAN
Sbjct: 400 RLVLVDLSHGSKILSLVRAKAAQRNIDSNKFFTFVGDITRLYSKGGLRCNAIANAANCKF 459
Query: 372 -------------------WRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIV 412
RLKPGGGG NAAIFSAAGP LEV T +RA SL PG +++V
Sbjct: 460 PFVGLICMSRRSFEKASPCRRLKPGGGGANAAIFSAAGPELEVETKKRAGSLIPGKALVV 519
Query: 413 PLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVR 472
PLPSTSPL REGVTHVIHVLGPNMN +RPNCL+ DYVKG ++LR+AYTSLFEGF SI+
Sbjct: 520 PLPSTSPLFSREGVTHVIHVLGPNMNRQRPNCLNNDYVKGSKVLREAYTSLFEGFASIMN 579
Query: 473 SQEKLSKGCNEDIRLEPSVSQDHSEDVHGNYISTGD-KIKRDGGHEYEQSKKCK-TQNEV 530
+Q L +G +E++R E SVSQDH + H + D KIKR G +E E SKKCK Q+E
Sbjct: 580 TQGNLLEGSSENLRSELSVSQDHFKGNHIKNVPNHDQKIKRVGVYESETSKKCKGFQDEH 639
Query: 531 GTDINLSRAANLSADNEKIGVSTSKAWGSWAQALYRTAMYPERHKDDLLEISDDVVVLND 590
D S+ +NEKIG + +K WGSWAQ+LY AM+PE+HKD+L+EISDDVVVLND
Sbjct: 640 EFDCTESKEGKDXLNNEKIGRNMTKTWGSWAQSLYHIAMHPEKHKDNLIEISDDVVVLND 699
Query: 591 LYPK 594
YPK
Sbjct: 700 XYPK 703
>gi|224140455|ref|XP_002323598.1| predicted protein [Populus trichocarpa]
gi|222868228|gb|EEF05359.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/585 (65%), Positives = 453/585 (77%), Gaps = 35/585 (5%)
Query: 14 EEKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASS 73
E++K K ++VI+VGAPGSGKSTFCEHVM SS RPW RICQDTIN GK+GTK QCL A++
Sbjct: 1 EQQKGKPVMVILVGAPGSGKSTFCEHVMGSSLRPWTRICQDTINNGKAGTKPQCLKRAAA 60
Query: 74 ALKKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNL 132
ALK+GKSVF+DRCNL++EQR+DFVKL G +VDVHAVVLDLPA+LCISRSVKR HEGNL
Sbjct: 61 ALKEGKSVFIDRCNLDKEQRSDFVKLDCGAQVDVHAVVLDLPAQLCISRSVKRTGHEGNL 120
Query: 133 QGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTLPHGSFGQ 192
QGGKAAAVVNRMLQKKELPKL+EGF+RI C NENDV+A + Y+ LGPLDTL +G FGQ
Sbjct: 121 QGGKAAAVVNRMLQKKELPKLNEGFARIVFCHNENDVEATIKAYTALGPLDTLSNGCFGQ 180
Query: 193 KNPDAKIQLGIMKFLKKVDAPSNTGSTASSTQDPVPPQITEEKNSCLEGQEITSLLSDAA 252
KNPDAKIQLGIMKFLKKV+APS+ GS A+S
Sbjct: 181 KNPDAKIQLGIMKFLKKVEAPSSLGSCAAS------------------------------ 210
Query: 253 GEEVKGTENPEVASVNQNGSSSDVPTLAFPSLSTSDFQFNNEKASDVIIEKVEEFVNKLG 312
++VK +E+ SV+ + S D+ TLAFPS+ST+DFQFNNEKASD+I+EKVEEFVNKL
Sbjct: 211 -KDVKESEDLAKDSVDADVSVGDITTLAFPSISTADFQFNNEKASDIIVEKVEEFVNKLE 269
Query: 313 NARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANW 372
NAR VLVDL+ GSKILSLVRAKAA+++I+ KKFFTFVGDITRLY+ GGL CN IANAANW
Sbjct: 270 NARFVLVDLSHGSKILSLVRAKAAKRNIDSKKFFTFVGDITRLYSQGGLRCNAIANAANW 329
Query: 373 RLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHV 432
RLKPGGGGVNAAIF+AAGP+LE AT ERAKSL PG++V+VPLPS SPL RE V+HVIHV
Sbjct: 330 RLKPGGGGVNAAIFAAAGPSLETATKERAKSLLPGHAVVVPLPSDSPLYTREEVSHVIHV 389
Query: 433 LGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEKLSKGCNEDIRLEPSVS 492
LGPNMNP+RPN L+ DY KGC ILR+AYTSLF GFLSIVRS+ KL + E + PS
Sbjct: 390 LGPNMNPQRPNSLNNDYTKGCSILREAYTSLFTGFLSIVRSRSKLPRRIIEKLESSPSDL 449
Query: 493 QDHSEDVHGNYISTGDKIKRDGGHEYEQSKKCK-TQNEVGTDINL--SRAANLSADNEKI 549
+D S + ++ KIKRD YE+SKKCK T +E DI+ S ++ D K+
Sbjct: 450 KDPSHGPRNHLTNSDQKIKRDDDCVYERSKKCKGTHDETVADISAPSSTYGKVTGDKSKL 509
Query: 550 GVSTSKAWGSWAQALYRTAMYPERHKDDLLEISDDVVVLNDLYPK 594
TSK+WGSWAQALY AM+PE+HKD LLE+ DDVVVLNDLYPK
Sbjct: 510 EGPTSKSWGSWAQALYHIAMHPEKHKDKLLEVLDDVVVLNDLYPK 554
>gi|255579308|ref|XP_002530499.1| aprataxin, putative [Ricinus communis]
gi|223529956|gb|EEF31883.1| aprataxin, putative [Ricinus communis]
Length = 749
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/581 (67%), Positives = 458/581 (78%), Gaps = 38/581 (6%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
QI+V++VG PGSGKSTFC+HVM SS+RPW+RICQDTIN GK+GTK QCL SA +ALK+GK
Sbjct: 34 QIVVLLVGPPGSGKSTFCDHVMSSSSRPWSRICQDTINNGKAGTKPQCLKSAVNALKEGK 93
Query: 80 SVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAA 139
SVF+DRCNL++EQR +FVKL ++DVHAVVLDLPA+LCISRSVKR HEGNLQGGKAAA
Sbjct: 94 SVFIDRCNLDKEQRAEFVKLADSQIDVHAVVLDLPAQLCISRSVKRTAHEGNLQGGKAAA 153
Query: 140 VVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTLPHGSFGQKNPDAKI 199
VVNRMLQKKELPKLSEGFSRI C NE+DVQAA+D YS LGPLD LP+GSFGQK PDAK+
Sbjct: 154 VVNRMLQKKELPKLSEGFSRIMFCPNESDVQAAIDMYSALGPLDILPNGSFGQKKPDAKV 213
Query: 200 QLGIMKFLKKVDAPSNTGSTASSTQDPVPPQITEEKNSCLEGQEITSLLSDAAGEEVKGT 259
Q GIMKFLKKVDAPSN GS + LS +EVK +
Sbjct: 214 QQGIMKFLKKVDAPSNVGSNIA--------------------------LSATTSKEVKES 247
Query: 260 ENPEVASVNQNGSSSDVPTLAFPSLSTSDFQFNNEKASDVIIEKVEEFVNKLGNARLVLV 319
E+ S+ + S +PTLAFPS+ST+DFQF+NEKASD+I+EKVEEFV KLGNARLVLV
Sbjct: 248 EDLIKGSICHDEDS--IPTLAFPSISTADFQFHNEKASDIIVEKVEEFVKKLGNARLVLV 305
Query: 320 DLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGG 379
DL+QGSKILSLVRAKAAQ++I+ KFFTFVGDIT+L + GGL CNVIANAANWRLKPGGG
Sbjct: 306 DLSQGSKILSLVRAKAAQRNISTNKFFTFVGDITQLLSQGGLRCNVIANAANWRLKPGGG 365
Query: 380 GVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNP 439
GVNAAI+SAAGPALEVAT E A SL PG++V+VPLPS SPL REGV+H+IHVLGPNMNP
Sbjct: 366 GVNAAIYSAAGPALEVATKELATSLLPGHAVVVPLPSNSPLYHREGVSHIIHVLGPNMNP 425
Query: 440 RRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEKLSKGCNEDIRLEPSVSQDHSEDV 499
+RPNCL+GDY KGC+IL AYTSLF GF+SI+++Q K K E++ + S+ QD S D+
Sbjct: 426 QRPNCLNGDYAKGCKILSDAYTSLFGGFVSILQNQAKSGKS-RENLVSDQSL-QDMSHDI 483
Query: 500 HGNYISTGD-KIKRDGGHEYEQSKKCK-TQNEVGTDINLSRA----ANLSADNEKIGVST 553
N ++ GD KIKRD + E+SKK K +QNE T +N + + +S DN KI ST
Sbjct: 484 PRNILTNGDQKIKRDDDYMTEKSKKYKGSQNE--TRVNSTGSGCTYGKISRDNSKIDGST 541
Query: 554 SKAWGSWAQALYRTAMYPERHKDDLLEISDDVVVLNDLYPK 594
SK+W SWAQALY AM PERHKD+LLEISDDVVVLNDLYPK
Sbjct: 542 SKSWNSWAQALYHIAMRPERHKDELLEISDDVVVLNDLYPK 582
>gi|357438365|ref|XP_003589458.1| Transcription factor bHLH140, partial [Medicago truncatula]
gi|355478506|gb|AES59709.1| Transcription factor bHLH140, partial [Medicago truncatula]
Length = 639
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/600 (60%), Positives = 452/600 (75%), Gaps = 18/600 (3%)
Query: 1 MDTDIDDTCKAKDEEKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGK 60
MD D+D+ K K ILVI+VGAPGSGKSTFCE VMRSS+R W R+CQDTI GK
Sbjct: 1 MDMDLDNN-------KDAKPILVILVGAPGSGKSTFCEEVMRSSSRTWLRVCQDTIGNGK 53
Query: 61 SGTKVQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLGG-PEVDVHAVVLDLPAKLCI 119
+G+K QCL+SA+ LK GKSVF+DRCNL REQR+DF+KL G ++D+HAVVLDLPAKLCI
Sbjct: 54 AGSKAQCLSSAARGLKDGKSVFIDRCNLNREQRSDFLKLRGESQIDIHAVVLDLPAKLCI 113
Query: 120 SRSVKRIEHEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGL 179
SRSVKR HEGNLQGGKAAAVVNRMLQ KELPKLSEGF+RIT CQ+E++V+ A+DTY L
Sbjct: 114 SRSVKRSGHEGNLQGGKAAAVVNRMLQSKELPKLSEGFNRITFCQSESNVKDAIDTYQKL 173
Query: 180 GPLDTLPHGSFGQKNPDAKIQLGIMKFLKKVDAPSNTGSTASSTQDPVPPQITEEKNSCL 239
GPL+ L HG FGQKNPD+KIQ IMKFLKK + P +T S ++ D + + C
Sbjct: 174 GPLENLSHGCFGQKNPDSKIQSSIMKFLKKAEVPVDTASKENTIGDSTSQTSGKNDSLCK 233
Query: 240 EGQEITSLLSDA--AGEEVKGTENPEVASVNQNGSSSDVPTLAFPSLSTSDFQFNNEKAS 297
+ ++I S ++ ++++G N S + S D PTLAFPS+ST+DFQFN++KA+
Sbjct: 234 DMEKIPSAHDNSKLGSKDIEGQTNIPAGSCHNQVSLDDTPTLAFPSISTADFQFNHDKAA 293
Query: 298 DVIIEKVEEFVNKLGNARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYT 357
D+I+EKV E+ NK+ NARLVLVDLT SKILSLV++KAA+K+++ +KFFT VGDITRLY+
Sbjct: 294 DIIVEKVVEYSNKMENARLVLVDLTHRSKILSLVKSKAAEKNVDTQKFFTHVGDITRLYS 353
Query: 358 GGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPST 417
GGL CNVIANAANWRLKPGGGGVNA+IF AAGP LE AT E+AK++ PGN+V+VPLPS+
Sbjct: 354 TGGLRCNVIANAANWRLKPGGGGVNASIFDAAGPELESATKEKAKTVSPGNAVVVPLPSS 413
Query: 418 SPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEKL 477
SPL REGVTHVIHVLGPNMNP+RPNCL+ DY +GC++L+ AY SLFEGF SIVR+
Sbjct: 414 SPLFTREGVTHVIHVLGPNMNPQRPNCLNNDYERGCKVLQDAYASLFEGFASIVRN---- 469
Query: 478 SKGCNEDIRLEPSVSQDHSEDVHGNYISTGDKIKRDGGHEYEQSKKCK-TQNEVGTDINL 536
+ NE++ + QD SE N T K KRD HE E+SKK K T + T
Sbjct: 470 TVHQNENLGKKSLELQDQSEQCSRN---TDQKSKRDADHELEKSKKYKGTHDGFDTTFTG 526
Query: 537 SRAANLSADNEKIGVSTSKAWGSWAQALYRTAMYPERHKDDLLEISDDVVVLNDLYPKVH 596
SR + +++++ ST KAWGSWAQAL+ AM+PE+HKDDLLEIS+D+VVLND+YPK
Sbjct: 527 SRDEKVDSEHKRTDGSTKKAWGSWAQALHLIAMHPEKHKDDLLEISEDIVVLNDMYPKAQ 586
>gi|356496191|ref|XP_003516953.1| PREDICTED: transcription factor bHLH140-like [Glycine max]
Length = 734
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/602 (61%), Positives = 443/602 (73%), Gaps = 45/602 (7%)
Query: 1 MDTDIDDTCKAKDEEKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGK 60
MD D+++ K+ K +LVI+VGAPGSGKSTFCE VM SS RPW R+CQDTI GK
Sbjct: 1 MDMDVEEASAPKER----KPVLVILVGAPGSGKSTFCEEVMGSSTRPWVRVCQDTIGNGK 56
Query: 61 SGTKVQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCI 119
+G K QCL+SA+ ALK GKSVF+DRCNL+REQR++F+KLG GP++DVHAVVLDLPAKLCI
Sbjct: 57 AGNKAQCLSSATRALKDGKSVFIDRCNLDREQRSEFIKLGDGPQIDVHAVVLDLPAKLCI 116
Query: 120 SRSVKRIEHEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGL 179
SRSVKR HEGNLQGGKAAAVVNRMLQ KELPKLSEGFSRIT CQNE+DV+ AL+TYS L
Sbjct: 117 SRSVKRTGHEGNLQGGKAAAVVNRMLQHKELPKLSEGFSRITFCQNESDVKNALNTYSTL 176
Query: 180 GPLDTLPHGSFGQKNPDAKIQLGIMKFLKKVDAPSNTGSTASSTQDPVPPQITEEKNSCL 239
GPLD+L +G FGQKNPD+KIQ+GIMKFLK+ + P S
Sbjct: 177 GPLDSLQYGCFGQKNPDSKIQVGIMKFLKRAEVPQTFSS--------------------- 215
Query: 240 EGQEITSLLSDAAGEEVKGTENPEVASVNQNG---SSSDVPTLAFPSLSTSDFQFNNEKA 296
+ D E K EN V SV + S D+PTLAFPS+STSDFQFN+EKA
Sbjct: 216 --------IPDNDNSETKEVENQAVGSVGSHANQVSLDDIPTLAFPSISTSDFQFNHEKA 267
Query: 297 SDVIIEKVEEFVNKLGNARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLY 356
+D+I+EKV EF NK NARLVLVDL+ SKILSLV+AK A K+I+ +KFFT VGDIT LY
Sbjct: 268 ADIIVEKVAEFSNKFRNARLVLVDLSHKSKILSLVKAKIAGKNIDAQKFFTHVGDITHLY 327
Query: 357 TGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPS 416
+ GGL CNVIANAANWRL PGGGGVNAAIF+AAGP LE AT E+ +SL PGN+ +VPLPS
Sbjct: 328 SRGGLRCNVIANAANWRLNPGGGGVNAAIFNAAGPELESATKEKVQSLSPGNAAVVPLPS 387
Query: 417 TSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEK 476
+SPL REGVTHVIHV+GPNMNP+RPNCL+ DY KGC+IL+ AYTSLFEGF SIVR+Q
Sbjct: 388 SSPLFTREGVTHVIHVVGPNMNPQRPNCLNNDYNKGCKILQDAYTSLFEGFASIVRNQTW 447
Query: 477 LSKGCNEDIR---LEPSVSQDHSEDVHGNYISTGDKIKRDGGHEYEQSKKCK-TQNEVGT 532
G +E++ LE V D S + + T K KRD H +SKK K T+++ G
Sbjct: 448 HPVGKSENLERKSLELQVQSDCSRNY---FTKTDQKSKRDVDHGLGKSKKYKGTRDDSGL 504
Query: 533 DINLSRAANLSADNEKIGVSTSKAWGSWAQALYRTAMYPERHKDDLLEISDDVVVLNDLY 592
SR N+ +++ + S +K WGSWAQAL++ AM+PE+ KDDLLEISDDVVVLND+Y
Sbjct: 505 TFTDSRNENVDSEH-RTERSMTKTWGSWAQALHQIAMHPEKLKDDLLEISDDVVVLNDMY 563
Query: 593 PK 594
PK
Sbjct: 564 PK 565
>gi|296081123|emb|CBI18255.3| unnamed protein product [Vitis vinifera]
Length = 678
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/591 (60%), Positives = 431/591 (72%), Gaps = 83/591 (14%)
Query: 4 DIDDTCKAKDEEKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGT 63
++D +K+ E + K I+V+++GAPGSGKSTFCEHV+RSS RPW R+CQDTI GK+GT
Sbjct: 3 EMDCEPTSKEGEGQGKPIVVLLMGAPGSGKSTFCEHVIRSSTRPWVRVCQDTIGNGKAGT 62
Query: 64 KVQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSV 123
K QCL SA+SAL+ GKSVF+DRCNL+REQR +FVKLG P+V++HAVVLDLPA+LCISRSV
Sbjct: 63 KSQCLKSATSALEDGKSVFIDRCNLDREQRAEFVKLGSPQVEMHAVVLDLPAQLCISRSV 122
Query: 124 KRIEHEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLD 183
KR HEGNLQGGKAAAVVNRMLQKKELPKLSEGF RIT CQN++DVQ AL+TYS L LD
Sbjct: 123 KRTGHEGNLQGGKAAAVVNRMLQKKELPKLSEGFHRITFCQNDSDVQTALNTYSALSHLD 182
Query: 184 TLPHGSFGQKNPDAKIQLGIMKFLKKVDAPSNTGSTASSTQDPVPPQITEEKNSCLEGQE 243
TLP G FGQKNPDAKIQL + + C + ++
Sbjct: 183 TLPPGCFGQKNPDAKIQLA-------------------------------KDSCCKQPED 211
Query: 244 ITSLLSDAAGEEVKGTENPEVASVNQNGSSSDVPTLAFPSLSTSDFQFNNEKASDVIIEK 303
I+S S +E+KG E+ V SV+ SS D+PTLAFPS+ST+DFQFN+EKA+D+I+EK
Sbjct: 212 ISS--SSGNAKEIKGGEDIVVHSVDGTVSSKDIPTLAFPSISTADFQFNHEKAADIILEK 269
Query: 304 VEEFVNKLGNARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCC 363
VEEFVNK+ NARLVLVDL+ GSKILSLVRAKAAQ++I+ KFFTFVGDITRLY+ GGL C
Sbjct: 270 VEEFVNKVENARLVLVDLSHGSKILSLVRAKAAQRNIDSNKFFTFVGDITRLYSKGGLRC 329
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGR 423
N IANAANWRLKPGGGG NAAIFSAAGP LEV T +RA SL PG +++VPLPSTSPL R
Sbjct: 330 NAIANAANWRLKPGGGGANAAIFSAAGPELEVETKKRAGSLIPGKALVVPLPSTSPLFSR 389
Query: 424 EGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEKLSKGCNE 483
EGVTHVIHVLGPNMN +RPNCL+ DYVKG ++LR+AYTSLFEGF SI+ +Q L +G +E
Sbjct: 390 EGVTHVIHVLGPNMNRQRPNCLNNDYVKGSKVLREAYTSLFEGFASIMNTQGNLLEGSSE 449
Query: 484 DIRLEPSVSQDHSEDVHGNYISTGDKIKRDGGHEYEQSKKCKTQNEVGTDINLSRAANLS 543
++R E LSR +
Sbjct: 450 NLRSE-----------------------------------------------LSR---VG 459
Query: 544 ADNEKIGVSTSKAWGSWAQALYRTAMYPERHKDDLLEISDDVVVLNDLYPK 594
+NEKIG + +K WGSWAQ+LY AM+PE+HKD+L+EISDDVVVLNDLYPK
Sbjct: 460 LNNEKIGRNMTKTWGSWAQSLYHIAMHPEKHKDNLIEISDDVVVLNDLYPK 510
>gi|449440255|ref|XP_004137900.1| PREDICTED: transcription factor bHLH140-like [Cucumis sativus]
Length = 712
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/584 (61%), Positives = 424/584 (72%), Gaps = 47/584 (8%)
Query: 12 KDEEKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSA 71
K +E + K I+VI+VGAPGSGKSTFCE VM SS+RPW RICQDTI GKSGT+ QCL +A
Sbjct: 8 KGKEGQGKLIMVILVGAPGSGKSTFCELVMGSSSRPWVRICQDTIGNGKSGTRAQCLKTA 67
Query: 72 SSALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGN 131
+SAL GKSVF+DRCNLE EQR DFVKLGGP+VDVHAVVLDLPA+LCISRSVKR HEGN
Sbjct: 68 TSALNDGKSVFVDRCNLEIEQRADFVKLGGPQVDVHAVVLDLPAQLCISRSVKRTGHEGN 127
Query: 132 LQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTLPHGSFG 191
L GGKAAAVVN+MLQKKELPKL+EGF+RIT C NE+DV +A+D Y L LPHG FG
Sbjct: 128 LSGGKAAAVVNKMLQKKELPKLNEGFTRITFCHNESDVLSAIDMYKSLDLHTMLPHGCFG 187
Query: 192 QKNPDAKIQLGIMKFLKKVDAPSNTGSTASSTQDPVPPQITEEKN-SCLEGQEITSLLSD 250
QKNPD K+QLGI KFLKK + PS T S+A++ ++ PQ T+EK SC
Sbjct: 188 QKNPDKKVQLGITKFLKKAEKPSKTCSSANTDKNSPTPQPTQEKRESC------------ 235
Query: 251 AAGEEVKGTENPEVASVNQNGSSSDVPTLAFPSLSTSDFQFNNEKASDVIIEKVEEFVNK 310
S SD PTLAFPS+STSDF+F++EKA+++I+EKVEEF++K
Sbjct: 236 ------------------DKISQSDPPTLAFPSISTSDFKFSHEKAAEIIVEKVEEFMDK 277
Query: 311 LGNARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAA 370
LGNARLVLVDL+ GSKILS+V+AKA +K+I+ KFFTFVGDIT+L + GGL CNVIANAA
Sbjct: 278 LGNARLVLVDLSHGSKILSMVKAKATEKNISSTKFFTFVGDITKLNSEGGLRCNVIANAA 337
Query: 371 NWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVI 430
NWRLKPGGGGVNAAIFSAAG LEVAT ++A SL PGN+V V LPSTSPL REGVTHVI
Sbjct: 338 NWRLKPGGGGVNAAIFSAAGSGLEVATKQQANSLQPGNAVAVQLPSTSPLLNREGVTHVI 397
Query: 431 HVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEKLSKGCNEDIRLEPS 490
HVLGPNMNP+RPN L+ DY +GC++L AY+SLF+ F+SIV+ + K KG +E + P
Sbjct: 398 HVLGPNMNPQRPNYLNNDYDEGCKLLGNAYSSLFQAFISIVQDKYKSVKGIHECLGSTPP 457
Query: 491 VSQDHSEDVHGNYISTGDKIKRDGGHEYEQSKKCKTQNEVGTDINLSRAANLSADNEKIG 550
Q HSED H K KR+ E+SKK K +N N
Sbjct: 458 ELQKHSEDGH-------HKFKRENLQNLERSKKWKGSQNSTEGLN---------QNNNTV 501
Query: 551 VSTSKAWGSWAQALYRTAMYPERHKDDLLEISDDVVVLNDLYPK 594
SK WGSWAQALY TAM+PERH + +LE SDDVVVL D+YPK
Sbjct: 502 PKKSKHWGSWAQALYDTAMHPERHTNSVLETSDDVVVLYDIYPK 545
>gi|449483719|ref|XP_004156669.1| PREDICTED: transcription factor bHLH140-like [Cucumis sativus]
Length = 712
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/584 (61%), Positives = 424/584 (72%), Gaps = 47/584 (8%)
Query: 12 KDEEKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSA 71
K +E + K I+VI+VGAPGSGKSTFCE VM SS+RPW RICQDTI GKSGT+ QCL +A
Sbjct: 8 KGKEGQGKLIMVILVGAPGSGKSTFCELVMGSSSRPWVRICQDTIGNGKSGTRAQCLKTA 67
Query: 72 SSALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGN 131
+SAL GKSVF+DRCNLE EQR DFVKLGGP+VDVHAVVLDLPA+LCISRSVKR HEGN
Sbjct: 68 TSALNDGKSVFVDRCNLEIEQRADFVKLGGPQVDVHAVVLDLPAQLCISRSVKRTGHEGN 127
Query: 132 LQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTLPHGSFG 191
L GGKAAAVVN+MLQKKELPKL+EGF+RIT C NE+DV +A+D Y L LPHG FG
Sbjct: 128 LSGGKAAAVVNKMLQKKELPKLNEGFTRITFCHNESDVLSAIDMYKSLDLHTMLPHGCFG 187
Query: 192 QKNPDAKIQLGIMKFLKKVDAPSNTGSTASSTQDPVPPQITEEKN-SCLEGQEITSLLSD 250
QKNPD K+QLGIMKFLKK + PS T S+A++ ++ PQ T+EK SC
Sbjct: 188 QKNPDKKVQLGIMKFLKKAEKPSKTCSSANTDKNSPTPQPTQEKRESC------------ 235
Query: 251 AAGEEVKGTENPEVASVNQNGSSSDVPTLAFPSLSTSDFQFNNEKASDVIIEKVEEFVNK 310
S SD PTLAFPS+STSDF+F++EKA+++I+ KVEEF++K
Sbjct: 236 ------------------DKISQSDPPTLAFPSISTSDFKFSHEKAAEIIVGKVEEFMDK 277
Query: 311 LGNARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAA 370
LGNARLVLVDL+ GSKILS+V+AKA +K+I+ KFFTFVGDIT+L + GGL CNVIANAA
Sbjct: 278 LGNARLVLVDLSHGSKILSMVKAKATEKNISSTKFFTFVGDITKLNSEGGLRCNVIANAA 337
Query: 371 NWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVI 430
NWRLKPGGGGVNAAIFSAAG LEVAT ++A SL PGN+V V LPSTSPL REGVTHVI
Sbjct: 338 NWRLKPGGGGVNAAIFSAAGSGLEVATKQQANSLQPGNAVAVQLPSTSPLLNREGVTHVI 397
Query: 431 HVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEKLSKGCNEDIRLEPS 490
HVLGPNMNP+RPN L+ DY +GC++L AY+SLF+ F+SIV+ + K KG +E + P
Sbjct: 398 HVLGPNMNPQRPNYLNNDYDEGCKLLGNAYSSLFQAFISIVQDKYKSVKGIHECLGSTPP 457
Query: 491 VSQDHSEDVHGNYISTGDKIKRDGGHEYEQSKKCKTQNEVGTDINLSRAANLSADNEKIG 550
Q HSED H K KR+ E+SKK K +N N
Sbjct: 458 ELQKHSEDGH-------HKFKRENLQNLERSKKWKGSQNSTEGLN---------QNNNTV 501
Query: 551 VSTSKAWGSWAQALYRTAMYPERHKDDLLEISDDVVVLNDLYPK 594
SK WGSWAQALY TAM+PERH + +LE SDDVVVL D+YPK
Sbjct: 502 PKKSKHWGSWAQALYDTAMHPERHTNSVLETSDDVVVLYDIYPK 545
>gi|297810265|ref|XP_002873016.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318853|gb|EFH49275.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 898
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/597 (55%), Positives = 418/597 (70%), Gaps = 56/597 (9%)
Query: 2 DTDIDDTCKAKDEE-KKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGK 60
D+D + + K EE +K KQI+V+++G PGS KSTFC+ VMRSS RPW+RICQD IN GK
Sbjct: 193 DSDHREKMEVKIEESEKAKQIVVLLIGPPGSCKSTFCDTVMRSSHRPWSRICQDIINNGK 252
Query: 61 SGTKVQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCIS 120
+GTK QCL A+ +L++GKSVF+DRCNL+REQR++F+KLGGP ++VHAVVL+L A++CIS
Sbjct: 253 AGTKAQCLKMATESLREGKSVFIDRCNLDREQRSEFIKLGGPGIEVHAVVLELSAQVCIS 312
Query: 121 RSVKRIEHEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLG 180
RSVKR HEGNLQGG+AAAVVN+MLQ KELPK++EGFSRI C N+ DV+ A +TY+ LG
Sbjct: 313 RSVKRTGHEGNLQGGRAAAVVNKMLQSKELPKVNEGFSRIMFCYNDADVENASNTYNKLG 372
Query: 181 PLDTLPHGSFGQKNPDAKIQLGIMKFLKKVDA--PSNTGSTASSTQDPVPPQITEEKNSC 238
P+D LP G FG+K D K Q GIMKF KKV+A S++ A++TQ+
Sbjct: 373 PMDNLPSGCFGEKKSDTKSQPGIMKFFKKVNALPGSSSNEAANATQN------------- 419
Query: 239 LEGQEITSLLSDAAGEEVKGTENPEVASVNQNGSSSDVPTLAFPSLSTSDFQFNNEKASD 298
+ + T N V+ + GS+ VPTLAFPS+ST+DFQF+ EKASD
Sbjct: 420 ----------------DNEKTRNVRVSPA-KLGSADIVPTLAFPSISTADFQFDLEKASD 462
Query: 299 VIIEKVEEFVNKLGNARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTG 358
+I+EK EEF+ KLG ARLVLVDL+QGSKILSLV+AKAAQK+I+ +FFTFVGDIT+L +
Sbjct: 463 IIVEKAEEFLPKLGTARLVLVDLSQGSKILSLVKAKAAQKNIDSARFFTFVGDITKLRSE 522
Query: 359 GGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTS 418
GGL CNVIANA NWRLKPGGGGVNAAIF AAGP LE AT RA +L PG + +VPLPST
Sbjct: 523 GGLHCNVIANATNWRLKPGGGGVNAAIFKAAGPDLEAATRVRANTLLPGKAAVVPLPSTC 582
Query: 419 PLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEKLS 478
PL EG+THVIHVLGPNMNP RP+ L+ DY KGC+ LR+AYTSLFEGFLS+V+ Q KL
Sbjct: 583 PLHNAEGITHVIHVLGPNMNPNRPDNLNNDYTKGCKTLREAYTSLFEGFLSVVQDQSKLP 642
Query: 479 KGCNEDIRLEPSVSQDHSEDVHGNYISTGDKIKRDGGHEYEQSKKCKTQNEVGTDINLSR 538
K N+ +G+ IK D E++KK K + NL
Sbjct: 643 KRSNQTA-----------------LSDSGEDIKEDS----ERNKKYKGSQDKAVTNNLES 681
Query: 539 AANLSADNEKIGVSTSKAWGSWAQALYRTAMYPERHKDDLLEISDDVVVLNDLYPKV 595
+ D G SK W +WA AL+ AM+PERH++ +LE SD++VV+ND YPK
Sbjct: 682 GS--LEDTRDSGKKMSKGWSTWALALHSIAMHPERHENVVLEFSDNIVVINDQYPKA 736
>gi|15240948|ref|NP_195751.1| aprataxin [Arabidopsis thaliana]
gi|75335734|sp|Q9M041.1|BH140_ARATH RecName: Full=Transcription factor bHLH140; AltName: Full=Basic
helix-loop-helix protein 140; Short=AtbHLH140;
Short=bHLH 140; AltName: Full=Transcription factor EN
122; AltName: Full=bHLH transcription factor bHLH140
gi|7320709|emb|CAB81914.1| putative protein [Arabidopsis thaliana]
gi|332002943|gb|AED90326.1| aprataxin [Arabidopsis thaliana]
Length = 912
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/582 (56%), Positives = 414/582 (71%), Gaps = 53/582 (9%)
Query: 14 EEKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASS 73
E K KQI+V+++G PGSGKSTFC+ MRSS RPW+RICQD +N GK+GTK QCL A+
Sbjct: 221 EADKAKQIVVLLIGPPGSGKSTFCDTAMRSSHRPWSRICQDIVNNGKAGTKAQCLKMATD 280
Query: 74 ALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQ 133
+L++GKSVF+DRCNL+REQR++F+KLGGPE +VHAVVL+LPA++CISRSVKR HEGNLQ
Sbjct: 281 SLREGKSVFIDRCNLDREQRSEFIKLGGPEFEVHAVVLELPAQVCISRSVKRTGHEGNLQ 340
Query: 134 GGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTLPHGSFGQK 193
GG+AAAVVN+MLQ KELPK++EGFSRI C ++ DV A++ Y+ LGP+DTLP G FG+K
Sbjct: 341 GGRAAAVVNKMLQSKELPKVNEGFSRIMFCYSDADVDNAVNMYNKLGPMDTLPSGCFGEK 400
Query: 194 NPDAKIQLGIMKFLKKVDA-PSNTGSTASSTQDPVPPQITEEKNSCLEGQEITSLLSDAA 252
D K Q GIMKF KKV A P+++ + A+ N+ + E+T+
Sbjct: 401 KLDTKSQPGIMKFFKKVSALPASSSNEAT--------------NTTRKADEMTA------ 440
Query: 253 GEEVKGTENPEVASVNQNGSSSDVPTLAFPSLSTSDFQFNNEKASDVIIEKVEEFVNKLG 312
N V+ V + GS+ VPTLAFPS+ST+DFQF+ EKASD+I+EK EEF++KLG
Sbjct: 441 --------NVRVSPV-KLGSADIVPTLAFPSISTADFQFDLEKASDIIVEKAEEFLSKLG 491
Query: 313 NARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANW 372
ARLVLVDL++GSKILSLV+AKA+QK+I+ KFFTFVGDIT+L + GGL CNVIANA NW
Sbjct: 492 TARLVLVDLSRGSKILSLVKAKASQKNIDSAKFFTFVGDITKLRSEGGLHCNVIANATNW 551
Query: 373 RLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHV 432
RLKPGGGGVNAAIF AAGP LE AT RA +L PG +V+VPLPST PL EG+THVIHV
Sbjct: 552 RLKPGGGGVNAAIFKAAGPDLETATRVRANTLLPGKAVVVPLPSTCPLHNAEGITHVIHV 611
Query: 433 LGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEKLSKGCNEDIRLEPSVS 492
LGPNMNP RP+ L+ DY KGC+ LR+AYTSLFEGFLS+V+ Q KL K R +
Sbjct: 612 LGPNMNPNRPDNLNNDYTKGCKTLREAYTSLFEGFLSVVQDQSKLPK------RSSQTAV 665
Query: 493 QDHSEDVHGNYISTGDKIKRDGGHEYEQSKKCKTQNEVGTDINLSRAANLSADNEKIGVS 552
D ED IK D E++KK K + NL + D G
Sbjct: 666 SDSGED-----------IKEDS----ERNKKYKGSQDKAVTNNLESES--LEDTRGSGKK 708
Query: 553 TSKAWGSWAQALYRTAMYPERHKDDLLEISDDVVVLNDLYPK 594
SK W +WA AL+ AM+PERH++ +LE D++VV+ND YPK
Sbjct: 709 MSKGWNTWALALHSIAMHPERHENVVLEYLDNIVVINDQYPK 750
>gi|414866300|tpg|DAA44857.1| TPA: hypothetical protein ZEAMMB73_940063 [Zea mays]
Length = 791
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 334/624 (53%), Positives = 421/624 (67%), Gaps = 65/624 (10%)
Query: 10 KAKDEEKKWKQILVIMVGAPGSGKSTFCEHVM--RSSARPWARICQDTINKGKSGTKVQC 67
+ K +E+ KQ++V++VG PGSGKSTF + V+ ++ R W R+CQDTI GK+GTK+QC
Sbjct: 26 ETKGDERGRKQVMVVLVGPPGSGKSTFADAVVGGSTAGRHWVRVCQDTIGNGKAGTKIQC 85
Query: 68 LTSASSALKKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRI 126
L +AS ALK+GKSV +DRCNLEREQR DFVKLGG DVHAV LDLPAK+CISR+V R
Sbjct: 86 LKAASDALKEGKSVLVDRCNLEREQRADFVKLGGTLRADVHAVSLDLPAKVCISRAVSRK 145
Query: 127 EHEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTLP 186
HEGNLQGGKAA VVNRMLQKKE P L+EGFSRI C ++ D++ A+D Y+GLGP D+LP
Sbjct: 146 GHEGNLQGGKAALVVNRMLQKKETPLLTEGFSRIMCCNDDGDIKKAVDLYNGLGPSDSLP 205
Query: 187 HGSFGQKNPDAKIQLGIMKFLKKVDAP---SNTGSTASST------QDPVPPQITEEKN- 236
G FGQK+ +Q+GIMKFLKK DA +++G + T Q+P+P Q E
Sbjct: 206 SGVFGQKSKRP-VQVGIMKFLKKTDASVVETSSGPKQALTEIKPAQQNPLPKQENVEAGF 264
Query: 237 SCLEGQEITSLLSDAAG--EEVKGTENPEVASVNQNGSSSDVPTLAFPSLSTSDFQFNNE 294
+C E+ L+D E KG++ +V S TLAFPS+ST+DFQF+ +
Sbjct: 265 AC--SMEVEKGLNDKMENEEHAKGSDYCDVGS----------RTLAFPSISTADFQFDLD 312
Query: 295 KASDVIIEKVEEFVNKLGNARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITR 354
+ASD+I++ F+ K N RLVLVDL++ S+ILSLV+ KAA+K I+ +FFT+VGDIT+
Sbjct: 313 RASDIIVDTAANFLQKFDNIRLVLVDLSEKSRILSLVKQKAAKKSIDSNRFFTYVGDITQ 372
Query: 355 LYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPL 414
L+T GGL C+VI NAANWRLKPGGGGVN AI+SAAG +L+ AT + A +L PG SV+VPL
Sbjct: 373 LHTKGGLQCSVIGNAANWRLKPGGGGVNTAIYSAAGESLQHATKKCADALRPGTSVVVPL 432
Query: 415 PSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQ 474
PSTSPL REGVTHVIHVLGPNMNP RP+CL DY +G +ILR+AYTSLFE F SIV+S
Sbjct: 433 PSTSPLHQREGVTHVIHVLGPNMNPMRPDCLKNDYTRGSKILREAYTSLFENFASIVQSY 492
Query: 475 EKLSKGCNEDIRLEPSVSQDHSEDVHGNYISTGD-KIKRDGGHEYEQSKK---------C 524
+ K NE +E IS D K+KR+ HE E+ KK
Sbjct: 493 --MGKQNNE----------SGAEKSASGRISPNDTKMKREDNHESERMKKHKLFQPIMTA 540
Query: 525 KTQNEVGTDIN---------LSRAA---NLSADNEKIGVSTSKAWGSWAQALYRTAMYPE 572
K Q+E T +N S AA DN++ V TSK WGSWAQ+LY AM PE
Sbjct: 541 KRQHEC-TKVNAPNCHDNAMTSSAAPSQTRQVDNKRNDVVTSKTWGSWAQSLYELAMNPE 599
Query: 573 RHK--DDLLEISDDVVVLNDLYPK 594
++K D +LE SD+ VVL DLYPK
Sbjct: 600 KYKNSDSILETSDEYVVLKDLYPK 623
>gi|222624733|gb|EEE58865.1| hypothetical protein OsJ_10463 [Oryza sativa Japonica Group]
Length = 765
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 324/590 (54%), Positives = 406/590 (68%), Gaps = 31/590 (5%)
Query: 14 EEKKWKQILVIMVGAPGSGKSTFCEHVMRSSA--RPWARICQDTINKGKSGTKVQCLTSA 71
EE KQ++V++VG PGSGKSTF E V+ SA R WAR+CQDTI GK+GTK+QCL +A
Sbjct: 30 EEGGGKQVMVVLVGPPGSGKSTFAEAVLGGSAAGRTWARVCQDTIGNGKAGTKIQCLKAA 89
Query: 72 SSALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVV-LDLPAKLCISRSVKRIEHEG 130
+ ALK+GKSV LDRCNLEREQR DF+KLG V LDLPAK+CISRSV R HEG
Sbjct: 90 ADALKEGKSVLLDRCNLEREQRADFMKLGSHVHVDVHAVVLDLPAKVCISRSVSRTGHEG 149
Query: 131 NLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTLPHGSF 190
NLQGG+AA VVNRML+ KE P L+EGFSRI C++ N+++ A+D YS LGP D+L G F
Sbjct: 150 NLQGGRAAMVVNRMLKNKETPLLTEGFSRIMFCKDNNEIKKAVDMYSALGPSDSLDSGVF 209
Query: 191 GQKNPDAKIQLGIMKFLKKVDAPSNTGSTASSTQDPVPPQ----ITEEKNSCLEGQEITS 246
GQ N +Q+GIMKFLKK + + T + PQ I+E++N LE +
Sbjct: 210 GQ-NSKGPVQVGIMKFLKKPGSSAEKSGGHKVTPNESIPQMQNHISEQQN--LEVGGTCT 266
Query: 247 LLSDAAGEEVKGTENPEVASVNQNGSSSDVPTLAFPSLSTSDFQFNNEKASDVIIEKVEE 306
+ S K E+ SV + SS TLAFPS+ST+DFQF+ ++ASD+I++ V +
Sbjct: 267 VESVKELSNSKKIEDQSRESVLSDISSR---TLAFPSISTADFQFDLDRASDIIVDAVAD 323
Query: 307 FVNKLGNARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVI 366
+ K N RLVLVDL+ S+ILSLV+ KAA+K+IN +FFTFVGDIT+L + GGL CNVI
Sbjct: 324 ILQKYDNIRLVLVDLSHKSRILSLVKEKAAKKNINSSRFFTFVGDITQLQSKGGLRCNVI 383
Query: 367 ANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGREGV 426
ANAANWRLKPGGGGVNAAI++AAG L+ AT E A +L PG+SV VPLPSTSPL REGV
Sbjct: 384 ANAANWRLKPGGGGVNAAIYNAAGEDLQRATKECADTLRPGSSVAVPLPSTSPLHQREGV 443
Query: 427 THVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEKLSKGCNEDIR 486
TH+IHVLGPNMNP RP+CL DY KG +IL +AYTSLFE F++IV+S C
Sbjct: 444 THIIHVLGPNMNPMRPDCLKNDYTKGSKILHEAYTSLFENFVAIVQS-------CMGKQN 496
Query: 487 LEPSVSQDHSEDVHGNYISTGDKIKRDGGHEYEQSKKCKTQNEVGTDINLSRAANLSADN 546
EP++ + + N K KR+ H+ E++KK K + T N +R D+
Sbjct: 497 TEPALEKPATAVTSPN----DSKTKRECNHDSERTKKHKLV-QPNTSSNQAR----EGDS 547
Query: 547 EKIGVSTSKAWGSWAQALYRTAMYPERHK--DDLLEISDDVVVLNDLYPK 594
++ GV+T+K WGSWAQALY AM+PE +K D LLEISDD VVLNDLYPK
Sbjct: 548 KRSGVTTTKTWGSWAQALYELAMHPENYKNSDSLLEISDDFVVLNDLYPK 597
>gi|357120026|ref|XP_003561732.1| PREDICTED: transcription factor bHLH140-like [Brachypodium
distachyon]
Length = 762
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 320/611 (52%), Positives = 410/611 (67%), Gaps = 60/611 (9%)
Query: 11 AKDEEKKWKQILVIMVGAPGSGKSTFCEHVMR--SSARPWARICQDTINKGKSGTKVQCL 68
A+ E K ++VI+VG PGSGKSTF E V+ ++ RPWAR+CQDTI KGK+GTK+QCL
Sbjct: 17 AETREVTGKNVVVILVGPPGSGKSTFAEAVLAGANTGRPWARVCQDTIGKGKAGTKIQCL 76
Query: 69 TSASSALKKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIE 127
+A+ ALK+GKSV +DRCNL+REQR DF+KLG + DVHAV LDLP K+CISRSV R
Sbjct: 77 KAAADALKEGKSVLIDRCNLDREQRADFLKLGSTVQADVHAVFLDLPTKVCISRSVSRTG 136
Query: 128 HEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTLPH 187
HEGNLQGG AA VVNRML+K E P L+EGFSRI C++++D++ A+D Y LGP +L
Sbjct: 137 HEGNLQGGMAAMVVNRMLKKLETPLLTEGFSRIMFCKDDDDIKQAVDMYCALGPSHSLAS 196
Query: 188 GSFGQKNPDAKIQLGIMKFLKKVDAPSNTGSTASSTQDPVPPQIT-EEKNSCLEGQEITS 246
G FGQK+ +Q GI KF KK D SN P+ Q E +C E+
Sbjct: 197 GVFGQKS-KGPVQSGITKFFKKADTSSN----------PLSKQENLEAGGTC--SMEVEK 243
Query: 247 LLSDAAGEEVKGTENPEVASVNQNGSSSDVPTLAFPSLSTSDFQFNNEKASDVIIEKVEE 306
L++ G E + + ++ + N S TLAFPS+ST+DFQF+ E+ASD+I++ E
Sbjct: 244 KLNNMNGNEER---SKQIVPADINSS-----TLAFPSISTADFQFDLERASDIIVDAATE 295
Query: 307 FVNKLGNARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVI 366
FV K N RLVLVDL+Q S+ILSLV+ KAA+K I+ +FFTFVGDIT+L++ GGL CN I
Sbjct: 296 FVQKHDNMRLVLVDLSQKSRILSLVKDKAAKKSIDSSRFFTFVGDITQLHSKGGLQCNAI 355
Query: 367 ANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGREGV 426
ANAANWRLKPGGGGVNAAIF+AAG L+ AT E A +L PG+SV VPLPSTSPL REGV
Sbjct: 356 ANAANWRLKPGGGGVNAAIFNAAGEGLQHATKECADTLRPGSSVTVPLPSTSPLRQREGV 415
Query: 427 THVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEKLSKGCNEDIR 486
THVIHVLGPNMNP RP+CL DY +GC+IL AY SLFE F SI +S + N++
Sbjct: 416 THVIHVLGPNMNPMRPDCLKNDYTQGCKILHDAYNSLFENFASIFQS---YTGKQNDETS 472
Query: 487 LEPSVSQDHSEDVHGNYISTGD-KIKRDGGHEYEQSKKCKT----------QNEVGTD-I 534
+ S S+ IS D K+KR+ H+ E++KKCK Q GT +
Sbjct: 473 SKKSASR---------VISPTDSKMKREDSHDSERTKKCKLPPPILTSRQHQERKGTSTL 523
Query: 535 NLSRAANLSAD---------NEKIGVSTSKAWGSWAQALYRTAMYPERHK--DDLLEISD 583
N + +D +++ G T+K+WGSWAQALY AM+PE++K + +LE+SD
Sbjct: 524 NYHDNTMVPSDAPSQAREEGSKRNGAVTNKSWGSWAQALYEVAMHPEKYKNSNSILEVSD 583
Query: 584 DVVVLNDLYPK 594
++VVL DLYPK
Sbjct: 584 ELVVLKDLYPK 594
>gi|218192603|gb|EEC75030.1| hypothetical protein OsI_11122 [Oryza sativa Indica Group]
Length = 765
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 321/590 (54%), Positives = 406/590 (68%), Gaps = 31/590 (5%)
Query: 14 EEKKWKQILVIMVGAPGSGKSTFCEHVMRSSA--RPWARICQDTINKGKSGTKVQCLTSA 71
EE KQ++V++VG PGSGKSTF E V+ SA R W+R+CQDTI GK+GTK+QCL +A
Sbjct: 30 EEGGGKQVMVVLVGPPGSGKSTFAEAVLGGSAAGRTWSRVCQDTIGNGKAGTKIQCLKAA 89
Query: 72 SSALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVV-LDLPAKLCISRSVKRIEHEG 130
+ ALK+GKSV LDRCNLEREQR DF+KLG V LDLPAK+CISRSV R HEG
Sbjct: 90 ADALKEGKSVLLDRCNLEREQRADFMKLGSHVHVDVHAVVLDLPAKVCISRSVSRTGHEG 149
Query: 131 NLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTLPHGSF 190
NLQGG+AA VVNRML+ KE P L+EGFSRI C++ N+++ A+D YS LGP D+L G F
Sbjct: 150 NLQGGRAAMVVNRMLKNKETPLLTEGFSRIMFCKDNNEIKKAVDMYSALGPSDSLDSGVF 209
Query: 191 GQKNPDAKIQLGIMKFLKKVDAPS-NTGSTASSTQDPVPP---QITEEKNSCLEGQEITS 246
GQ N +Q+GIMKFLKK + + +G + +P I+E++N LE +
Sbjct: 210 GQ-NSKGPVQVGIMKFLKKPGSSAEKSGGHKVRPNESIPQMQNHISEQQN--LEVGGTCT 266
Query: 247 LLSDAAGEEVKGTENPEVASVNQNGSSSDVPTLAFPSLSTSDFQFNNEKASDVIIEKVEE 306
+ S K E+ SV + SS TLAFPS+ST+DFQF+ ++ASD+I++ V +
Sbjct: 267 VESVKELSNSKKIEDQSRESVLSDISSR---TLAFPSISTADFQFDLDRASDIIVDAVAD 323
Query: 307 FVNKLGNARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVI 366
+ K N RLVLVDL+ S+ILSLV+ KAA+K+I +FFTFVGDIT+L + GGL CNVI
Sbjct: 324 ILQKYDNIRLVLVDLSHKSRILSLVKEKAAKKNIKSSRFFTFVGDITQLQSKGGLRCNVI 383
Query: 367 ANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGREGV 426
ANAANWRLKPGGGGVNAAI++AAG L+ AT E A +L PG+SV VPLPSTSPL REGV
Sbjct: 384 ANAANWRLKPGGGGVNAAIYNAAGEDLQRATKECADTLRPGSSVAVPLPSTSPLHQREGV 443
Query: 427 THVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEKLSKGCNEDIR 486
TH+IHVLGPNMNP RP+CL DY KG +IL +AYTSLFE F++IV+S C
Sbjct: 444 THIIHVLGPNMNPMRPDCLKNDYTKGSKILHEAYTSLFENFVAIVQS-------CMGKQN 496
Query: 487 LEPSVSQDHSEDVHGNYISTGDKIKRDGGHEYEQSKKCKTQNEVGTDINLSRAANLSADN 546
EP++ + + N K KR+ H+ E++KK K + T N +R D+
Sbjct: 497 TEPALEKPATAVTSPN----DSKTKRECNHDSERTKKHKLV-QPNTSSNQAR----EGDS 547
Query: 547 EKIGVSTSKAWGSWAQALYRTAMYPERHK--DDLLEISDDVVVLNDLYPK 594
++ GV+T+K WGSWAQALY AM+PE +K D LLEISDD VVLNDLYPK
Sbjct: 548 KRSGVTTTKTWGSWAQALYELAMHPENYKNSDSLLEISDDFVVLNDLYPK 597
>gi|168026850|ref|XP_001765944.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682850|gb|EDQ69265.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 689
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 240/580 (41%), Positives = 341/580 (58%), Gaps = 59/580 (10%)
Query: 21 ILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+L+++VG PG+GKST C+ +++ + RPW RICQD I+ GK G+K +CL A++AL G S
Sbjct: 1 VLLMLVGPPGAGKSTVCQKIVQIAVRPWKRICQDVISNGKPGSKQKCLKDAAAALSAGTS 60
Query: 81 VFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAA 139
V +DRCN++ QR +F++L + V+ HA+VL++P K CI R+ +R+ HEG L G AA
Sbjct: 61 VLIDRCNIDVSQRKEFLQLAKDKGVESHALVLNIPVKECIKRASERVAHEGGLDGSNAAG 120
Query: 140 VVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTLPHGSFGQKNPDAKI 199
+ R + + P L EGF R+T C+ + +++ + YS LG D LP G FG A +
Sbjct: 121 IALRFARSRVPPSLEEGFVRVTYCRTDPEIENIVCVYSQLGFWDHLPLGVFG-----ASV 175
Query: 200 QLGIMKFLKKVDAPSNTGSTASSTQDPVPPQITEEKNSCLEGQEITSLLSDAAGEEVKGT 259
Q G E+ S L+ +E +SL +E++
Sbjct: 176 QEG-----------------------------KEKLKSVLQNKE-SSLKPTYDKQELRAN 205
Query: 260 ENPEVA---SVNQNGSSSDVPTLAFPSLSTSDFQFNNEKASDVIIEKVEEFVNKLGNA-- 314
+++ +N GSS +LAFPS+ST+DFQF++ KA+D+I+E EF K +A
Sbjct: 206 SLTQISLQGPMNVAGSSPGARSLAFPSISTADFQFDHGKAADIILETAVEFHRKPKHAGL 265
Query: 315 RLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRL 374
RLV VDL+ S +LS V AKAA+ ++ + + GDIT L+T GG CN IANA NWRL
Sbjct: 266 RLVFVDLSPSSDMLSRVSAKAAEAGLSSLQLLIYAGDITTLHTTGGPRCNFIANATNWRL 325
Query: 375 KPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLG 434
KPGGGGVNAAIF A G LE+AT +++ PG++V VPLP+TSPL +GV+HVIHVLG
Sbjct: 326 KPGGGGVNAAIFKAGGYELEMATKAVVQTVEPGDAVAVPLPATSPLRRLQGVSHVIHVLG 385
Query: 435 PNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEKLSKGCNEDIRLEPSVSQD 494
PNMN +RPN L GDY +GC+ILRKAY +LFE F SI EK S + + +E S Q
Sbjct: 386 PNMNSQRPNSLAGDYKQGCDILRKAYRTLFEVFSSIALKDEKASSSPYKPL-VERSTKQG 444
Query: 495 HSEDVHGNYISTGDKIKRDGGHEYEQSKKCKTQNEVGTDINLSRAANLSADNEKIGVSTS 554
G G + K +G S K T+N + + A D + TS
Sbjct: 445 -----SGQSSVAGGQSKTNG------SSKAVTKNAF--TLLMENAKRKKIDEAR----TS 487
Query: 555 KAWGSWAQALYRTAMYPERHKDDLLEISDDVVVLNDLYPK 594
+ W SWAQ+L A++P++H +L+IS D VV++D + K
Sbjct: 488 QQWSSWAQSLRNIALHPDKHSPTVLKISKDAVVISDKFAK 527
>gi|302788568|ref|XP_002976053.1| hypothetical protein SELMODRAFT_104482 [Selaginella moellendorffii]
gi|300156329|gb|EFJ22958.1| hypothetical protein SELMODRAFT_104482 [Selaginella moellendorffii]
Length = 718
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 237/571 (41%), Positives = 318/571 (55%), Gaps = 54/571 (9%)
Query: 29 PGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSVFLDRCNL 88
PGSGKS FC V+ ++++ W RICQD I GK GTK QC+ A+ AL SVF+DR NL
Sbjct: 40 PGSGKSRFCSSVIENASQTWTRICQDIIANGKRGTKAQCIKQATIALNSSSSVFIDRTNL 99
Query: 89 EREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVVNRMLQK 147
REQR +F++ V+ HAVVL+LP CI+R++ R HEG L+G K AV+ RM
Sbjct: 100 NREQRLEFIEFAKKRGVEAHAVVLNLPVGTCITRAMNRTSHEGGLEGKKVGAVIQRMAHG 159
Query: 148 KELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTLPHGSFGQKNPDAKIQLGIMKFL 207
ELP L EGFSRIT+C+ + D + Y L LP G F +N + + + +FL
Sbjct: 160 VELPALEEGFSRITVCRTDGDADECIVAYRSLSSSSKLPTGVF-DRNSSSTTKGSLEQFL 218
Query: 208 KKVDAPSNTGSTASSTQDPVPPQITEEKNSCLEGQEITSLLSDAAGEEVKGTENPEVASV 267
K P ++K GQ +S S G E E +
Sbjct: 219 NK-------------------PGGGQKK----AGQASSSAASTKKGVESAAPELKDGDGS 255
Query: 268 NQNGSSSDVPTLAFPSLSTSDFQFNNEKASDVIIEKVEEFVNKLGNA--RLVLVDLTQGS 325
S TLAFPS+ST+DF+F++EKA+++I+E V EF ++ ++ RLVLVD+ QGS
Sbjct: 256 MPQASEESCATLAFPSISTADFRFDHEKAANIIVETVSEFFSRAESSGLRLVLVDIDQGS 315
Query: 326 KILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAI 385
+LS VR+KA ++ +KF GDIT+L++ GG C+VIANAANWRLK GGGGVN AI
Sbjct: 316 DMLSRVRSKAESAGLDSRKFLVTHGDITKLHSTGGPRCSVIANAANWRLKGGGGGVNLAI 375
Query: 386 FSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCL 445
+ AAG E AT + AK+L PG V VPLP++SPL +EGVTHVIHVLGPNMNP+RPNC+
Sbjct: 376 YRAAGDDFEEATKKYAKTLDPGKVVAVPLPASSPLRTKEGVTHVIHVLGPNMNPQRPNCI 435
Query: 446 DGDYVKGCEILRKAYTSLFEGFLSIVRSQEKLSKGCNEDIRLEPSVSQDHSEDVHGNYIS 505
DY +GC +LR+ Y +LF F SI + Q +K
Sbjct: 436 ADDYSQGCRLLRQCYAALFSTFASIAKGQASKAK-------------------------V 470
Query: 506 TGDKIKRDGGHEYEQSKKCKTQNEVGTDINLSRAANL--SADNEKIGVSTSKAWGSWAQA 563
T + K + G + N + +A EK W +WAQA
Sbjct: 471 TASPASNSSSPGSSKKGKAEVGKVTGEEGNPASGTGTLKAAVEEKAATKKPVNWPAWAQA 530
Query: 564 LYRTAMYPERHKDDLLEISDDVVVLNDLYPK 594
L+ A +PE+H + +LE++DD VVL DLY K
Sbjct: 531 LHDVAFHPEKHSNVVLEVTDDCVVLPDLYAK 561
>gi|302769802|ref|XP_002968320.1| hypothetical protein SELMODRAFT_89021 [Selaginella moellendorffii]
gi|300163964|gb|EFJ30574.1| hypothetical protein SELMODRAFT_89021 [Selaginella moellendorffii]
Length = 689
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 235/571 (41%), Positives = 317/571 (55%), Gaps = 54/571 (9%)
Query: 29 PGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSVFLDRCNL 88
PGSGKS FC V+ ++++ W RICQD I GK GTK QC+ A+ AL SVF+DR NL
Sbjct: 9 PGSGKSRFCSSVIENASQTWTRICQDIIANGKRGTKAQCIKQATIALNSSSSVFIDRTNL 68
Query: 89 EREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVVNRMLQK 147
REQR +F++ V+ H VVL+LP CI+R++ R HEG L+G K AV+ RM
Sbjct: 69 NREQRLEFIEFAKKHGVEAHGVVLNLPVGTCITRAMNRTSHEGGLEGKKVGAVIQRMAHG 128
Query: 148 KELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTLPHGSFGQKNPDAKIQLGIMKFL 207
ELP L EGFSRIT+C+ + D + TY L LP G F +N + + + +FL
Sbjct: 129 VELPALEEGFSRITVCRTDGDADECIATYRSLSSSSKLPTGVF-DRNSSSTTKGSLEQFL 187
Query: 208 KKVDAPSNTGSTASSTQDPVPPQITEEKNSCLEGQEITSLLSDAAGEEVKGTENPEVASV 267
K P ++K GQ +S S E E +
Sbjct: 188 NK-------------------PGGGQKK----AGQASSSAASTKKAVESAAPELKDGDGS 224
Query: 268 NQNGSSSDVPTLAFPSLSTSDFQFNNEKASDVIIEKVEEFVNKLGNA--RLVLVDLTQGS 325
S TLAFPS+ST+DF+F++EKA+++I+E V EF ++ ++ RLVLVD+ QGS
Sbjct: 225 MPQASEESCATLAFPSISTADFRFDHEKAANIIVETVSEFFSRAESSGLRLVLVDIDQGS 284
Query: 326 KILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAI 385
+LS VR++A ++ +KF GDIT+L++ GG C+VIANAANWRLK GGGGVN AI
Sbjct: 285 DMLSRVRSRAESAGLDSRKFLVTHGDITKLHSTGGPRCSVIANAANWRLKGGGGGVNLAI 344
Query: 386 FSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCL 445
+ AAG E AT + AK+L PG V VPLP++SPL +EGVTHVIHVLGPNMNP+RPNC+
Sbjct: 345 YRAAGDDFEEATKKYAKTLDPGKVVAVPLPASSPLRTKEGVTHVIHVLGPNMNPQRPNCI 404
Query: 446 DGDYVKGCEILRKAYTSLFEGFLSIVRSQEKLSKGCNEDIRLEPSVSQDHSEDVHGNYIS 505
DY +GC +LR+ Y +LF F SI + Q +K
Sbjct: 405 ADDYSQGCRLLRQCYAALFSTFASIAKGQVSKAK-------------------------V 439
Query: 506 TGDKIKRDGGHEYEQSKKCKTQNEVGTDINLSRAANL--SADNEKIGVSTSKAWGSWAQA 563
T + K + G + N + +A EK W +WAQA
Sbjct: 440 TASPASNSSSPGSSKKGKAEVGKVTGEEGNPASGTGTLKAAVEEKAATKKPVNWPAWAQA 499
Query: 564 LYRTAMYPERHKDDLLEISDDVVVLNDLYPK 594
L+ A +PE+H + +LE++DD VVL DLY K
Sbjct: 500 LHDVAFHPEKHSNVVLEVTDDCVVLPDLYAK 530
>gi|242041271|ref|XP_002468030.1| hypothetical protein SORBIDRAFT_01g038370 [Sorghum bicolor]
gi|241921884|gb|EER95028.1| hypothetical protein SORBIDRAFT_01g038370 [Sorghum bicolor]
Length = 603
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 234/463 (50%), Positives = 300/463 (64%), Gaps = 39/463 (8%)
Query: 144 MLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTLPHGSFGQKNPDAKIQLGI 203
MLQKKE P L+EGFSRI C ++ D++ A+D Y+GLGP D+LP G FGQK+ +Q+GI
Sbjct: 1 MLQKKETPLLTEGFSRIMCCNDDGDIKKAVDLYNGLGPSDSLPSGVFGQKSKKP-VQVGI 59
Query: 204 MKFLKKVDAPSNTGSTAS---------STQDPVPPQITEEKN-SCLEGQEITSLLSDAAG 253
MKFLKK D S S+ + Q+P+P Q E +C E+ L+D
Sbjct: 60 MKFLKKADTSSVETSSGPKLALTEIKPAQQNPLPKQENVEAGFAC--PMEVEKGLNDKME 117
Query: 254 EEVKGTENPEVASVNQNGSSSDVPTLAFPSLSTSDFQFNNEKASDVIIEKVEEFVNKLGN 313
E E+ + GS TLAFPS+ST+DFQF+ ++ASDVI++ +F+ K N
Sbjct: 118 NE----EHAKEIDYCDVGSR----TLAFPSISTADFQFDLDRASDVIVDTAFKFLQKFDN 169
Query: 314 ARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWR 373
RLVLVDL++ S+ILSLV+ KAA+K I+ +FFT+VGDIT+L+T GGL C+VIANAANWR
Sbjct: 170 IRLVLVDLSEKSRILSLVKQKAAKKSIDSNRFFTYVGDITQLHTKGGLQCSVIANAANWR 229
Query: 374 LKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVL 433
LKPGGGGVNAAI++AAG +L+ AT + A +L PG SV+VPLPSTSPL REGVTHVIHVL
Sbjct: 230 LKPGGGGVNAAIYNAAGESLQHATKKCADALRPGTSVVVPLPSTSPLHQREGVTHVIHVL 289
Query: 434 GPNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEKLSKGCNEDIRLEPSVSQ 493
GPNMNP RP+ L DY +G +IL +AY SLFE F SIV+S + K NE E S S
Sbjct: 290 GPNMNPMRPDYLKNDYTRGSKILCEAYNSLFESFASIVQSY--MGKQNNES-GAEKSAS- 345
Query: 494 DHSEDVHGNYISTGDKIKRDGGHEYEQSKKCKTQNEVGTDINLSRAANLSADNEKIGVST 553
G K+KR+ H E+ KK K + T N +R DN++ V T
Sbjct: 346 -------GGTSPNDTKMKREDSHGSERMKKHKLFQPIMTS-NQTR----QVDNKRNDVVT 393
Query: 554 SKAWGSWAQALYRTAMYPERHK--DDLLEISDDVVVLNDLYPK 594
K WGSWAQ+LY AM PE++K D +LE SD+ +VL DLYPK
Sbjct: 394 RKTWGSWAQSLYELAMNPEKYKNSDSILETSDEYIVLKDLYPK 436
>gi|108707615|gb|ABF95410.1| basic helix-loop-helix, putative, expressed [Oryza sativa Japonica
Group]
Length = 572
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/425 (51%), Positives = 280/425 (65%), Gaps = 28/425 (6%)
Query: 176 YSGLGPLDTLPHGSFGQKNPDAKIQLGIMKFLKKVDAPSNTGSTASSTQDPVPPQ----I 231
YS LGP D+L G FGQ N +Q+GIMKFLKK + + T + PQ I
Sbjct: 2 YSALGPSDSLDSGVFGQ-NSKGPVQVGIMKFLKKPGSSAEKSGGHKVTPNESIPQMQNHI 60
Query: 232 TEEKNSCLEGQEITSLLSDAAGEEVKGTENPEVASVNQNGSSSDVPTLAFPSLSTSDFQF 291
+E++N LE ++ S K E+ SV + SS TLAFPS+ST+DFQF
Sbjct: 61 SEQQN--LEVGGTCTVESVKELSNSKKIEDQSRESVLSDISSR---TLAFPSISTADFQF 115
Query: 292 NNEKASDVIIEKVEEFVNKLGNARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGD 351
+ ++ASD+I++ V + + K N RLVLVDL+ S+ILSLV+ KAA+K+IN +FFTFVGD
Sbjct: 116 DLDRASDIIVDAVADILQKYDNIRLVLVDLSHKSRILSLVKEKAAKKNINSSRFFTFVGD 175
Query: 352 ITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVI 411
IT+L + GGL CNVIANAANWRLKPGGGGVNAAI++AAG L+ AT E A +L PG+SV
Sbjct: 176 ITQLQSKGGLRCNVIANAANWRLKPGGGGVNAAIYNAAGEDLQRATKECADTLRPGSSVA 235
Query: 412 VPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIV 471
VPLPSTSPL REGVTH+IHVLGPNMNP RP+CL DY KG +IL +AYTSLFE F++IV
Sbjct: 236 VPLPSTSPLHQREGVTHIIHVLGPNMNPMRPDCLKNDYTKGSKILHEAYTSLFENFVAIV 295
Query: 472 RSQEKLSKGCNEDIRLEPSVSQDHSEDVHGNYISTGDKIKRDGGHEYEQSKKCKTQNEVG 531
+S C EP++ + + N K KR+ H+ E++KK K +
Sbjct: 296 QS-------CMGKQNTEPALEKPATAVTSPN----DSKTKRECNHDSERTKKHKLV-QPN 343
Query: 532 TDINLSRAANLSADNEKIGVSTSKAWGSWAQALYRTAMYPERHK--DDLLEISDDVVVLN 589
T N +R D+++ GV+T+K WGSWAQALY AM+PE +K D LLEISDD VVLN
Sbjct: 344 TSSNQAR----EGDSKRSGVTTTKTWGSWAQALYELAMHPENYKNSDSLLEISDDFVVLN 399
Query: 590 DLYPK 594
DLYPK
Sbjct: 400 DLYPK 404
>gi|384249301|gb|EIE22783.1| HIT-like protein [Coccomyxa subellipsoidea C-169]
Length = 556
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 105/180 (58%), Gaps = 6/180 (3%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKG-KSGTKVQCLTSASSALKKGKS 80
++I+VG PGSGKSTF E + + + W RI QDTI G K GT+ QC +A AL KG S
Sbjct: 231 VLILVGPPGSGKSTFAEELKQRAPGHWQRINQDTIGGGSKKGTRQQCAAAARKALDKGSS 290
Query: 81 VFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAA 139
+DRCN + QR DFV L HAVVL LPA LC +R+ +R++HEG LQG A +
Sbjct: 291 CVIDRCNFDAAQRKDFVALAQDAGCHAHAVVLQLPAALCAARAAQRVDHEGGLQGASAKS 350
Query: 140 VVNRM---LQKKELPK-LSEGFSRITLCQNENDVQAALDTYSGLGPLDTLPHGSFGQKNP 195
VV RM + LP +EG S + +C+ E DV+ AL+ + G P +F + P
Sbjct: 351 VVYRMASQMTSAGLPNATTEGLSSVMVCRTEGDVKRALNAWGAYGRSSERPIDAFNKGLP 410
>gi|115452419|ref|NP_001049810.1| Os03g0293400 [Oryza sativa Japonica Group]
gi|113548281|dbj|BAF11724.1| Os03g0293400 [Oryza sativa Japonica Group]
Length = 312
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 98/161 (60%), Gaps = 18/161 (11%)
Query: 437 MNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEKLSKGCNEDIRLEPSVSQDHS 496
MNP RP+CL DY KG +IL +AYTSLFE F++IV+S C EP++ + +
Sbjct: 1 MNPMRPDCLKNDYTKGSKILHEAYTSLFENFVAIVQS-------CMGKQNTEPALEKPAT 53
Query: 497 EDVHGNYISTGDKIKRDGGHEYEQSKKCKTQNEVGTDINLSRAANLSADNEKIGVSTSKA 556
N K KR+ H+ E++KK K + T N +R D+++ GV+T+K
Sbjct: 54 AVTSPN----DSKTKRECNHDSERTKKHKLV-QPNTSSNQAR----EGDSKRSGVTTTKT 104
Query: 557 WGSWAQALYRTAMYPERHK--DDLLEISDDVVVLNDLYPKV 595
WGSWAQALY AM+PE +K D LLEISDD VVLNDLYPK
Sbjct: 105 WGSWAQALYELAMHPENYKNSDSLLEISDDFVVLNDLYPKA 145
>gi|320162649|gb|EFW39548.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 380
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 110/194 (56%), Gaps = 15/194 (7%)
Query: 278 TLAFPSLSTSDFQFNNEKASDVIIEKVEEFVNKLGNAR--LVLVDLTQGSKILSLVRAKA 335
TLAFPS+STS + F+ E AS +++E VEEF++ + R L+LVD++ SK LV+ +
Sbjct: 192 TLAFPSISTSTYMFDAELASILLVEAVEEFLDAHPDPRIQLLLVDISD-SKTNRLVQEDS 250
Query: 336 -AQKHIN-PKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL 393
QK+ K+F V D+TR+ C I NAAN RL GG G N AI A GP+L
Sbjct: 251 NRQKYTRRDKRFKVIVSDLTRV------NCRFIVNAANERLTAGGAGTNKAINLAVGPSL 304
Query: 394 EVATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGC 453
T S G + V +PS R +VIHV+GPNMNP+RP CL +Y KG
Sbjct: 305 HAETKRLYSSAEAGKAYPVKVPSPR----RVRFEYVIHVVGPNMNPQRPQCLHNNYEKGS 360
Query: 454 EILRKAYTSLFEGF 467
++L Y ++F F
Sbjct: 361 QLLSATYRAMFSTF 374
>gi|307105395|gb|EFN53644.1| hypothetical protein CHLNCDRAFT_136358 [Chlorella variabilis]
Length = 722
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 115/221 (52%), Gaps = 31/221 (14%)
Query: 21 ILVIMVGAPGSGKSTFCEHVMR-----------------------SSARPWARICQDTIN 57
++++MVG G+GKSTFC +++ ++ R W RI QD+I
Sbjct: 206 VVLVMVGLQGAGKSTFCHSLIQRAQQAGQQQQQQQQQPGEQPQQQAAPRRWVRINQDSIA 265
Query: 58 KGKSGTKVQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLGGPE--VDVHAVVLDLPA 115
G+ GT+ QCL +A+ AL G SV +DR + ++QR FV+L H ++L LP
Sbjct: 266 GGRRGTREQCLEAAARALAGGASVVVDRTGVTQDQRRPFVRLAQQHGVQQAHCLMLKLPV 325
Query: 116 KLCISRSVKRIEHEGNLQGGKAAAVVNRMLQKKEL---PKLSEGFSRITLCQNENDVQAA 172
KLC SR+ R +HEG LQG A V RM ++ E P+ EGF+ + +C+++ + AA
Sbjct: 326 KLCQSRAAARNDHEGALQGQAAYPAVARMQRQLEEGGDPQAREGFASVLICESDGEAAAA 385
Query: 173 LDTYSGLGPLDTLPHGSFGQKN---PDAKIQLGIMKFLKKV 210
L+ +S GP P + + P A I +F KKV
Sbjct: 386 LEAWSLYGPSHPDPAAEYARLRPPPPKAAALNTIDRFFKKV 426
>gi|308805384|ref|XP_003080004.1| basic helix-loop-helix (ISS) [Ostreococcus tauri]
gi|116058463|emb|CAL53652.1| basic helix-loop-helix (ISS) [Ostreococcus tauri]
Length = 202
Score = 113 bits (282), Expect = 4e-22, Method: Composition-based stats.
Identities = 65/166 (39%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 21 ILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+++++VG GSGKSTF E +R++ R W QDT+ G+ GT+ QC++ A + +GK
Sbjct: 10 VVLVLVGPSGSGKSTFSER-LRATGR-WTVSNQDTVRDGRRGTRRQCVSVAKRGVCEGKH 67
Query: 81 VFLDRCNLEREQRTDFVKLGG---PEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKA 137
V +DRC L REQR DFV L P D+H V + P R+ R H G ++G A
Sbjct: 68 VVIDRCGLSREQREDFVALAKASTPPCDLHCVWFNQPTTTYQERARARRNHPGGVEGDGA 127
Query: 138 AAVVNRMLQKKE--LPKLSEGFSRITLCQNENDVQAALDTYSGLGP 181
VV +++K+ P EGF I C+ ++DV AAL TY + P
Sbjct: 128 VRVVQMQMRRKDNAPPTKEEGFRTIRRCRFQDDVDAALGTYRMIPP 173
>gi|145348187|ref|XP_001418537.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578766|gb|ABO96830.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 207
Score = 103 bits (256), Expect = 4e-19, Method: Composition-based stats.
Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 8/169 (4%)
Query: 21 ILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+++++VG G+GKSTF + R W QDT++ GK GT+ QC+ A AL++GK
Sbjct: 10 VVLVLVGPSGAGKSTFSARLPRER---WTTANQDTVSNGKRGTRQQCVRVAKRALEEGKH 66
Query: 81 VFLDRCNLEREQRTDFVKL---GGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKA 137
V +DRC L R+QR DFV L P ++ AV + P + R R H G +QG +
Sbjct: 67 VVIDRCGLSRQQRADFVALAREARPPCELRAVWFNQPVSVYQQRVRMRTNHPGGVQGESS 126
Query: 138 AAVVNRMLQKKE--LPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDT 184
VV ++ K+ P EGF + C+ ++DV AA + L +T
Sbjct: 127 VRVVQLQMRGKDNAPPTKEEGFRIVRRCRFQDDVDAACAAFCALPAAET 175
>gi|302831764|ref|XP_002947447.1| hypothetical protein VOLCADRAFT_120448 [Volvox carteri f.
nagariensis]
gi|300267311|gb|EFJ51495.1| hypothetical protein VOLCADRAFT_120448 [Volvox carteri f.
nagariensis]
Length = 935
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 21 ILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+L+++ G PGSGKSTF ++ +S W + QD I GK GT+ QC+ + +AL +G
Sbjct: 257 VLLLLAGLPGSGKSTFSRELLAASPVAWVHVNQDAIRDGKPGTREQCIAAVRTALGEGAC 316
Query: 81 VFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAA 139
+DRC+ + QR + + VH V L LP LC R R H G LQG +
Sbjct: 317 CVVDRCHQDGAQRASMRAVAAECGLAVHCVALQLPEGLCAKRVSDRTGHPGGLQGDGSKK 376
Query: 140 VVNRMLQKKEL-----PKLSEGFSRITLCQNE 166
VV M + + P LSEGF+ + C N+
Sbjct: 377 VVFMMAGQMKKNSNWPPALSEGFASVMDCHND 408
>gi|357519757|ref|XP_003630167.1| Transcription factor bHLH140 [Medicago truncatula]
gi|355524189|gb|AET04643.1| Transcription factor bHLH140 [Medicago truncatula]
Length = 87
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Query: 373 RLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHV 432
RLKP GGGVNA+IF AAGP LE AT E+AK+L PGN+V+VPLPS+SP REGVTHVIHV
Sbjct: 10 RLKPDGGGVNASIFDAAGPELESATKEKAKTLSPGNAVVVPLPSSSPFFTREGVTHVIHV 69
Query: 433 LGPNMNPRRPNCLDGDYV 450
LG N + D DYV
Sbjct: 70 LGLNKILK-----DSDYV 82
>gi|159466214|ref|XP_001691304.1| predicted protein [Chlamydomonas reinhardtii]
gi|158279276|gb|EDP05037.1| predicted protein [Chlamydomonas reinhardtii]
Length = 410
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 5/143 (3%)
Query: 31 SGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSVFLDRCNLER 90
+GKSTF + +S W + QD INKGK G + QC+ + +AL +G +DRC+L+
Sbjct: 36 AGKSTFSRSLQDASTVSWVHVNQDAINKGKPGKREQCVAALRAALAEGSCCIIDRCHLDA 95
Query: 91 EQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVVNRMLQKKE 149
QR F++L V H V L +PA+ C R R +H G +QG AVV RM ++++
Sbjct: 96 SQRATFLELAAECHVAAHCVALAIPAQACAGRVAARTDHPGGVQGDNNRAVVFRMAKQQD 155
Query: 150 L----PKLSEGFSRITLCQNEND 168
P +EGF+ + C ++D
Sbjct: 156 SKGWPPTAAEGFTSVMDCFTDSD 178
>gi|326433140|gb|EGD78710.1| hypothetical protein PTSG_11768 [Salpingoeca sp. ATCC 50818]
Length = 1185
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 11/150 (7%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARP--WARICQDTINKGKSGTKVQCLTSASSALK 76
+Q L+++ G GSGK+T +H+M A P W RICQD + G++ +C+ A ALK
Sbjct: 65 QQRLLVLQGITGSGKTTLAKHIM-DLAEPNTWERICQDVL-----GSRDKCIAMARRALK 118
Query: 77 KGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGG 135
GKSV +DR N+ + QR ++ L + AVV+ + C+ R+ KR HEG +
Sbjct: 119 AGKSVIIDRTNMTKHQRKPWIDLADKFHIRPEAVVMQTASHDCVERASKRRAHEGGIDAA 178
Query: 136 KAAAVVNRMLQKK--ELPKLSEGFSRITLC 163
AA ++N L++K E P EGF ++ C
Sbjct: 179 SAARIINMQLRQKDVEQPSRLEGFWKLYPC 208
>gi|452821248|gb|EME28281.1| bifunctional polynucleotide phosphatase/kinase [Galdieria
sulphuraria]
Length = 222
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 92/174 (52%), Gaps = 18/174 (10%)
Query: 15 EKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSA 74
E +++ IL++++G PGSGK+TF + + A+ W R+CQD + T+ QC +
Sbjct: 56 EYQYRPILLMLIGIPGSGKTTFAKKL---EAKGWCRVCQDEL-----FTRQQCENYTITH 107
Query: 75 LKKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQ 133
L +GKS+ +DRCN+ +EQR ++ L V VV P +CISR +R EH NL+
Sbjct: 108 LLQGKSIVIDRCNVTKEQRAIWINLAKNANAVVGCVVFTTPIHICISRVAQRSEH-PNLK 166
Query: 134 GG--KAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTL 185
G K V+ + ++ P EG I C+ +Q D Y L L+T+
Sbjct: 167 GNDPKTENVIFQFAREFCAPIAEEG---IDFCRR---IQTEQDEYRILQQLETI 214
>gi|440798489|gb|ELR19557.1| histidine triad domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 575
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 128/296 (43%), Gaps = 52/296 (17%)
Query: 315 RLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAAN-W- 372
RL VD+T+ + + ++ + + +F V +IT++ T G + C VIANAAN W
Sbjct: 178 RLYAVDITESATLAAIRKCWKGRD----ARFQIRVANITKMKTEG-IPCRVIANAANEWY 232
Query: 373 -RLKPG--------GGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGR 423
R P G GVN AI AAGPAL+ T R K
Sbjct: 233 GRGAPSRQLSFSAMGSGVNLAINKAAGPALDKETKARYK--------------------- 271
Query: 424 EGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEKLSKGCNE 483
GV HV+HV+ PNMNP+R NCL DY KG +L + Y+SL F +V
Sbjct: 272 -GVHHVVHVMAPNMNPQRNNCLHDDYTKGDRLLGQCYSSLLTTFWDLVSGSPTTKASAQA 330
Query: 484 DIRLEPSVSQDHSEDVHGNYISTGDKIKRDGGHEYEQ---SKKCKTQNEVGTDINLSRAA 540
+ +E + + + + + + + +KK + + + G +AA
Sbjct: 331 EDEIEEDFDEANFAPRPTETKKSAPAVPKSSANAFSMLMTAKKPEAEPKGG------KAA 384
Query: 541 NLSADNEKIGVSTSKAWGSWAQALYRTAMYPERHKDDLLEISDD-VVVLNDLYPKV 595
+ A K G W+ AL A +PE+ +++ DD V + D +PKV
Sbjct: 385 SEGASAPKAPARA----GGWSDALTPYATHPEKVPPNIMHQYDDKTVCIFDKFPKV 436
>gi|281200370|gb|EFA74590.1| hypothetical protein PPL_11558 [Polysphondylium pallidum PN500]
Length = 624
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q LVI VG P SGKS F + + R W R+ QD + GT+ +C + + LK+G
Sbjct: 448 QRLVITVGYPASGKSYFASKL---AQRGWMRVNQDEL-----GTRKKCEDNLAQYLKRGD 499
Query: 80 SVFLDRCNLEREQRTDFVKLGGPE--VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKA 137
SV +DRCN + +QR ++K+G ++ + + A LC R V R +H +G +
Sbjct: 500 SVIVDRCNFDIQQRRSWLKIGKQHGVKNILILWFKIDADLCKKRIVVREDHPTIPKGNEG 559
Query: 138 AAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGL 179
++++ P EGFS I +E + AL+ ++ +
Sbjct: 560 IEIISKFQNMFVDPMDIEGFSNIETINSEEESNLALERFAQM 601
>gi|440793317|gb|ELR14504.1| basic helixloop-helix (bHLH) family protein [Acanthamoeba
castellanii str. Neff]
Length = 186
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 12/147 (8%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
K ++V++ G PGSGKSTF + R+S W R+ QD + G+ + A+K+
Sbjct: 19 KPVVVVLAGLPGSGKSTFATELERTSGEMWVRVSQDDL-----GSADEVKKQMEKAIKRK 73
Query: 79 KSVFLDRCNLEREQRTDFV----KLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
KSV +DRCN R +V + G ++ A+ D+P + CI R+ R H L
Sbjct: 74 KSVIVDRCNFSAGDRKMWVTEAKRYGATHIE--AIYFDVPKEECIRRASLRRGHP-TLSA 130
Query: 135 GKAAAVVNRMLQKKELPKLSEGFSRIT 161
KA V++ LP EGF+++T
Sbjct: 131 AKAEEVISEFSGAFALPTKYEGFAQVT 157
>gi|66812060|ref|XP_640209.1| hypothetical protein DDB_G0282695 [Dictyostelium discoideum AX4]
gi|60468197|gb|EAL66207.1| hypothetical protein DDB_G0282695 [Dictyostelium discoideum AX4]
Length = 652
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 7/157 (4%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI G P GKS F + + S+ W RI QD + GT+ +C LK G +V
Sbjct: 495 LVITCGLPACGKSYFAQAISERSSGAWKRINQDDL-----GTRKKCEDLLKQYLKAGHNV 549
Query: 82 FLDRCNLEREQRTDFVKLGGP--EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAA 139
+DRCN + QR +++KL VH + + +C R V R H +G + A
Sbjct: 550 IIDRCNQDIGQRRNWIKLAASLGVAQVHLIWFTIDQTICKGRIVVRENHPTIPKGDEGIA 609
Query: 140 VVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTY 176
++++ L P EGF+ +T +E + ++ Y
Sbjct: 610 IIDKFLTMFVPPSEFEGFASLTQVSSEQESNDLIEKY 646
>gi|403351974|gb|EJY75490.1| Bifunctional polynucleotide phosphatase/kinase, putative [Oxytricha
trifallax]
Length = 428
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 12/145 (8%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
KQ +V+ GAPGSGKSTF ++ + S +AR+ DT+ T +C+ A AL +
Sbjct: 270 KQEIVLFFGAPGSGKSTFWKNNLSS----YARVNNDTLK-----TPAKCIKVAEQALNEK 320
Query: 79 KSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRI--EHEGNLQGG 135
KSV +D N EQR + + + + + D+P ++C+ + +R H +L G
Sbjct: 321 KSVVIDNTNSTLEQRNRYTAISKALNIPIRCFIFDVPKEVCMHNNNQRKINAHREHLSGK 380
Query: 136 KAAAVVNRMLQKKELPKLSEGFSRI 160
A ++ + E P ++EGFS I
Sbjct: 381 VPAIPIHSFFKNSEKPTMAEGFSEI 405
>gi|449541680|gb|EMD32663.1| hypothetical protein CERSUDRAFT_126750 [Ceriporiopsis subvermispora
B]
Length = 1223
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
L+++VG PGSGKS ++ R W I QD +SG++ C + A G+ V
Sbjct: 486 LIVLVGLPGSGKSWLSRALITRDPRGWTYISQD-----ESGSRAACERAIGRAPAHGRMV 540
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
F DRCN R +R +++ L V D +LC SR+ R H GG+ + V
Sbjct: 541 F-DRCNASRTERREWLSLAHWAKAPVCVWFDYDEQLCTSRAQNRAGHPTLPPGGRVRSAV 599
Query: 142 NRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTL 185
+M P + EGF I + ++ AA + S L P TL
Sbjct: 600 AQMHGMFVRPTVDEGFKAIAVVRS---FAAAAELVSWLSPPVTL 640
>gi|328869003|gb|EGG17381.1| hypothetical protein DFA_08376 [Dictyostelium fasciculatum]
Length = 694
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+++ VG P SGKS F + + + W R+ QD + GT+ +C + LK G+SV
Sbjct: 522 VILTVGYPASGKSYFAQKL--TELGKWKRVNQDEM-----GTRKKCEDILITQLKAGESV 574
Query: 82 FLDRCNLEREQRTDFVKLGGP--EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAA 139
+DRCN + +QR ++KL ++H + + C R V R H +G +
Sbjct: 575 IVDRCNFDIQQRRVWIKLAQMYGATNIHILWFKPDVETCKKRIVVRENHPTIPKGEEGVQ 634
Query: 140 VVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGL 179
++++ P +EGF I L Q E + A+ Y L
Sbjct: 635 IIDKFQSMFIAPSTAEGFENIQLIQTEQESDEAIQKYIQL 674
>gi|393241409|gb|EJD48931.1| hypothetical protein AURDEDRAFT_135858 [Auricularia delicata
TFB-10046 SS5]
Length = 872
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
++++VG PG+GKS F + V + W I QD I G++ + + A K+ +
Sbjct: 488 MLVLVGLPGAGKSWFSQAVAKRDPDKWTWISQDEI-----GSRAKVEDAVGRAKKR---I 539
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
LDRCN + R F+KL V V D A+LC SR+ R +H GG+ A V
Sbjct: 540 ILDRCNTSADDRRWFLKLADRAGGVVCVWFDYTAELCTSRAQARPDHPTLPPGGRVRAAV 599
Query: 142 NRMLQKKELPKLSEGFSRI----TLCQNENDVQAALDTYSGLGPLDTLPH 187
+M ++ P L++GF I + + V+ T +G+ PH
Sbjct: 600 EQMQEQLVPPTLADGFGVIITVRSFAAADELVRRLCPTSAGIIKFPRTPH 649
>gi|440802395|gb|ELR23324.1| hypothetical protein ACA1_069080 [Acanthamoeba castellanii str.
Neff]
Length = 675
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 93/192 (48%), Gaps = 29/192 (15%)
Query: 278 TLAFPSLSTSDFQFNNEKASDVIIEKVEEFVNKLGNARLVLVDLTQGSKILSLVRAKAAQ 337
+LAFPS TS ++A+ VI + ++F+ + + LV + +G + LV + +
Sbjct: 504 SLAFPSFGTSMLDMQPKRAAAVIRKTAKKFLRARPDKDIRLVLVLEGKQDPVLVFFE--E 561
Query: 338 KHINPKKFFTFVGDITRL--YTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV 395
K I +F IT+L +G G + +A A W ++S
Sbjct: 562 KGIPDPRFTVATTPITKLDNISGHG---DGLAAARRW-------NETKKLYS-------- 603
Query: 396 ATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEI 455
TA +YP VPLP+ SPL ++GV V+H PNMNP +P+CL+ D +G +
Sbjct: 604 -TASECGQVYP-----VPLPADSPLYSQQGVRAVVHCRPPNMNPAKPDCLN-DEKEGKRL 656
Query: 456 LRKAYTSLFEGF 467
L++ Y LF+ F
Sbjct: 657 LKETYKRLFQFF 668
>gi|405120673|gb|AFR95443.1| hypothetical protein CNAG_02388 [Cryptococcus neoformans var.
grubii H99]
Length = 325
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 26/177 (14%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSA------------------RPWARICQDTINKGK 60
+Q+L+I+VG PGSGK+TF E ++R+S+ RPW R QD
Sbjct: 32 RQVLLILVGLPGSGKTTFAEALVRASSMSIAPPEGTGKAQPSVLRRPWIRASQD---DAP 88
Query: 61 SGTKVQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLGG---PEVDVHAVVLDLPAKL 117
S + +C + LK G +V +DR + QR+ FV + P V+ +VL + +
Sbjct: 89 SKKRQECESRVRWGLKNGYNVLVDRVGFDPVQRSHFVAIADDQLPRPSVYCLVLSVSQET 148
Query: 118 CISRSVKRIEHEGNLQGGKAAAVVNRMLQKKELPKL--SEGFSRITLCQNENDVQAA 172
SR ++R H G + V+++M ++ + P + EG RI + + AA
Sbjct: 149 LQSRLLRRELHPTIHGGEEGMRVLSQMSRQFQPPTIYGGEGLDRIYVLDEMDQPSAA 205
>gi|392570639|gb|EIW63811.1| ATP dependent DNA ligase [Trametes versicolor FP-101664 SS1]
Length = 829
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
L I+VG PG+GKSTF +M R W + QD +G++ C T+ +A + G V
Sbjct: 445 LFILVGLPGAGKSTFARMLMARDPRRWTYVSQD-----DAGSRSACETALGNA-RTGARV 498
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVV-LDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
LD CN+ R++R +++ L V D LC+SR+ R H G +
Sbjct: 499 LLDLCNVARDRRKEWLALAAHWATAPVCVWFDYERALCVSRAQNRAGHPTLPPGNRVRNA 558
Query: 141 VNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGP 181
+++M P L EGF + ++ AA + S L P
Sbjct: 559 MDQMHGMFVKPALEEGFKAVVAIRS---FAAAEELVSRLSP 596
>gi|168007356|ref|XP_001756374.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692413|gb|EDQ78770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 836
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
+ L+++VG PGSGKS + + R+ + +++ SG++ C A S + G
Sbjct: 454 RAALILLVGLPGSGKSWLSAALAK-------RVGAEVVSQDDSGSRDAC-ERAISRCRSG 505
Query: 79 KSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAA 138
K+ LDRCN R++R ++ L AV D+ A +C R +RI H ++ G++
Sbjct: 506 KTAILDRCNASRDERRQWLALADVGESAVAVYFDVDATICTQRINRRIHHP-TIRPGRSD 564
Query: 139 AVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTLP 186
+ +M + P EGF+ + + + A+ G PL P
Sbjct: 565 NAMAQMQRLMSKPSRDEGFAAVVTVPSFPAARDAVHALGGTPPLRKFP 612
>gi|412993029|emb|CCO16562.1| aprataxin [Bathycoccus prasinos]
Length = 629
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 21/186 (11%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTI-----NKGKSGTKVQCLTSASS 73
KQ +++ G GSGKST + + + + W + QDTI + QC+ A
Sbjct: 163 KQTCLVLTGTSGSGKSTIAKGL---TEKKWTVVNQDTIGSYCERECFRKKADQCVMKAKH 219
Query: 74 ALKKGKSVFLDRCNLEREQRTDFVKL---------GGPEVDVHAV--VLDLPAKLCISRS 122
L G+ V +DR N+ EQR FV +VD+ V LDL + SR
Sbjct: 220 GLMLGRHVVIDRTNMSAEQRKKFVDAVEYVRVNNNSESDVDIQIVSLYLDLDVSVTTSRV 279
Query: 123 VKRIEHEGNLQGGKAAAVVNRMLQKKE--LPKLSEGFSRITLCQNENDVQAALDTYSGLG 180
+R HEG ++G + +V++ L ++ P SEGF C+ +V+ A+ +
Sbjct: 280 ARRKNHEGRVEGREGVEIVHKQLYSRDSSTPHKSEGFDVCFRCKTPAEVEVAVGKIKAMT 339
Query: 181 PLDTLP 186
D P
Sbjct: 340 GHDLPP 345
>gi|219117377|ref|XP_002179483.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409374|gb|EEC49306.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 275
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 11/145 (7%)
Query: 21 ILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
++++VG PGSGK+T ++ + RI QD + GT+ +C AL GK
Sbjct: 119 FMLLLVGLPGSGKTTLACRLLEEWPDKFVRINQDEL-----GTRRECERLTRDALSAGKC 173
Query: 81 VFLDRCNLEREQRTDFVKLG---GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKA 137
+DRCN ++ QR FV + + V+ +VLD+ K CI R +R H ++ +A
Sbjct: 174 PVIDRCNFDKSQRQKFVSIAKEFSADTLVYCIVLDVDRKECIDRCRRRTGHP-TIKPAEA 232
Query: 138 AAVVNRMLQKKELPKLS--EGFSRI 160
+++ + + + PK + EG +R+
Sbjct: 233 TKIISMVASQYKPPKKAGVEGLNRV 257
>gi|72139831|ref|XP_791366.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase-like
[Strongylocentrotus purpuratus]
Length = 436
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI+VG P SGKS+F + + S W I +DT+N T +CL + A++ GK+V
Sbjct: 279 LVILVGPPASGKSSFAKDTLVSHGYVW--INRDTLN-----TPAKCLRATEEAMEAGKNV 331
Query: 82 FLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIE-HEGNLQGGKAAA 139
+D N R R D++ L E V +++D P +L ++ R EG+++ +
Sbjct: 332 VIDNTNPSRSARADYIDLAKEEGYVVRCIIMDTPLELAFHMNMYRQSLTEGSIR--RIPE 389
Query: 140 VVNRMLQKK-ELPKLSEGFSRITLCQ 164
V + +KK E P EGF+ I Q
Sbjct: 390 VAYNIYKKKYEAPSQDEGFATIEKVQ 415
>gi|390604899|gb|EIN14290.1| ATP dependent DNA ligase [Punctularia strigosozonata HHB-11173 SS5]
Length = 748
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS- 80
L+I+VG PGSGKS F ++ + W QD + +S + Q + AL+ G +
Sbjct: 414 LLILVGLPGSGKSWFSNALVARNPTAWIHTSQDE-ARSRSTCESQ-IGKTPVALRGGSTP 471
Query: 81 -VFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAA 139
V LDRCN+ RE R ++ L V V D ++LC SR+ R H GG+
Sbjct: 472 RVILDRCNMSREDRRLWLNLAQWSVTPVCVHFDYRSELCTSRAQNRPWHPTLPPGGRVRN 531
Query: 140 VVNRMLQKKELPKLSEGFSRITLCQNENDVQ 170
V +M + P L EGF I ++ V+
Sbjct: 532 AVEQMQRMFVKPTLQEGFKTIVTVRSFEAVR 562
>gi|321258937|ref|XP_003194189.1| hypothetical protein CGB_E2180W [Cryptococcus gattii WM276]
gi|317460660|gb|ADV22402.1| hypothetical protein CNBE1600 [Cryptococcus gattii WM276]
Length = 320
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 28/177 (15%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSA------------------RPWARICQDTINKGKS 61
Q+L+I+VG PGSGK+TF E ++R+S+ RPW R QD + +
Sbjct: 33 QVLLILVGLPGSGKTTFAEALVRASSMPIASPEGAGKVRPSVIRRPWIRASQDDAPRKR- 91
Query: 62 GTKVQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLGGPEVD---VHAVVLDLPAKLC 118
+ +C + LKKG +V +DR + QR+ FV + ++ V+ ++L + +
Sbjct: 92 --RQECESRVRWGLKKGYNVLVDRVGFDPVQRSHFVTIADDQLSRPLVYCLILSVSQETL 149
Query: 119 ISRSVKRIEHEGNLQGGKAAA-VVNRMLQKKELPKL--SEGFSRITLCQNENDVQAA 172
SR + R H +QGG+ V+++M + + P + EG RI + N AA
Sbjct: 150 QSRLLGRKFHP-TIQGGEEGMRVLSQMRRLFQPPTIYGGEGLDRIYVLDEINQPNAA 205
>gi|299115363|emb|CBN74191.1| FHA-HIT protein [Ectocarpus siliculosus]
Length = 484
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 359 GGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE--RAKSLYPGNSVIVPLPS 416
G C + N NWRL GG N + AAG +L + E R ++L V L
Sbjct: 87 AGARCAYLVNPCNWRLVAGGARTNMLVNRAAGDSLRQGSLEGGRTRALV-AEPFAVKLSQ 145
Query: 417 TSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQ 474
SPL EGV VI VLGPN++PR P CL + + +LR+ Y + F +V S+
Sbjct: 146 DSPL-RSEGVDTVIQVLGPNLDPRFPECLANEPDRARYLLRQCYDKTLDSFWKLVSSE 202
>gi|428180933|gb|EKX49798.1| hypothetical protein GUITHDRAFT_135515 [Guillardia theta CCMP2712]
Length = 875
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 67/139 (48%), Gaps = 13/139 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSA---RPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
LVI+ G PGSGKS HV R A W + QD ++ ++ C S K G
Sbjct: 487 LVILCGLPGSGKS----HVARMMALRDERWLVVSQD-----EARSRDACEQEVSRPGKHG 537
Query: 79 KSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAA 138
K V LDRCN +RE R ++ L V D +LC++R+ +RI+H G +
Sbjct: 538 K-VILDRCNPDREDRRRWLALAQWARKPICVHFDYEQQLCVARAQQRIDHPTLTPGRRVL 596
Query: 139 AVVNRMLQKKELPKLSEGF 157
+ M +K E P L EGF
Sbjct: 597 TAIEAMGRKMEAPGLDEGF 615
>gi|358053767|dbj|GAB00075.1| hypothetical protein E5Q_06777 [Mixia osmundae IAM 14324]
Length = 199
Score = 68.2 bits (165), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 11 AKDEEKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTS 70
A E+ +Q ++++ G GSGKST + ++ S + RICQD + G + C
Sbjct: 8 AHGHEQARQQQMLVLCGVIGSGKSTLADGIV-SRYPQYKRICQDVL-----GDRRSCEAM 61
Query: 71 ASSALKKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHE 129
A L +G SV +DR N + +QR FV + V V A+V P +C R + R HE
Sbjct: 62 AELYLSQGLSVIIDRQNFDIKQRKPFVSIAARLNVSVLAIVFSTPQDVCKERLLLRKGHE 121
Query: 130 GNLQGGKAAAVVNRMLQKKELPKLSEGFSRI 160
+A ++ +L+ + P EGF I
Sbjct: 122 TIQTPQEAMRILPMVLRDWQTPTAREGFHGI 152
>gi|134111819|ref|XP_775445.1| hypothetical protein CNBE1600 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258104|gb|EAL20798.1| hypothetical protein CNBE1600 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 330
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 28/177 (15%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSA------------------RPWARICQDTINKGKS 61
Q+L+I+VG PGSGK+TF E ++R+S+ RPW R QD S
Sbjct: 34 QVLLILVGLPGSGKTTFAEALVRASSMYITPPEGTGKVQPSVIRRPWMRASQD---DAPS 90
Query: 62 GTKVQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLGG---PEVDVHAVVLDLPAKLC 118
+ +C + LK G +V +DR + QR+ FV + P V+ ++L +
Sbjct: 91 KRRQECESRVRWGLKNGYNVLVDRVGFDPVQRSHFVAIADDQLPRPLVYCLILSVSQDTL 150
Query: 119 ISRSVKRIEH---EGNLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAA 172
SR + R H G +G + + ++R+ Q + EG R+ + N AA
Sbjct: 151 QSRLLGRESHPTIHGGEEGMRVLSQMSRLFQPPTI-YGGEGLDRMYVLDEINQPSAA 206
>gi|403414510|emb|CCM01210.1| predicted protein [Fibroporia radiculosa]
Length = 268
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARIC-QDTINKGKSGTKVQCLTSASSALKKG 78
QI++I+VG GSGKSTF + + P R C QD + +G + + A +L+ G
Sbjct: 20 QIVLILVGLIGSGKSTFAQAL--EQQLPHFRRCNQDDL----AGDRRRVEVLARESLRAG 73
Query: 79 KSVFLDRCNLEREQRTDFVKLGG--PEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGK 136
SV +DR N + QR ++ + P V +V D P ++C R +RI H
Sbjct: 74 LSVCIDRTNFDPRQRATWINMAYEFPGTQVWILVFDTPYEVCAQRLQERINHPTIKTPEH 133
Query: 137 AAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTY 176
+V+ R + + P EG+SR+ L +D + + TY
Sbjct: 134 GRSVLERFHSQYQAPSPYEGYSRL-LSLRPSDHPSPVYTY 172
>gi|118366861|ref|XP_001016646.1| DNA 3'-phosphatase family protein [Tetrahymena thermophila]
gi|89298413|gb|EAR96401.1| DNA 3'-phosphatase family protein [Tetrahymena thermophila SB210]
Length = 451
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 12/145 (8%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
KQ ++IMVG+ GSGKSTF E+ ++ + RI +DT+ T +CL +A A+++
Sbjct: 292 KQEMIIMVGSAGSGKSTFVENYLKD----YVRINRDTLK-----TMPKCLEAAEKAIQQK 342
Query: 79 KSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKA 137
K+V +D N E R DF+ L ++ V A L + L +R ++ K
Sbjct: 343 KNVVIDNTNPTVESRKDFIALAKKHKIQVRAFDLQITKDLAFHLDNQRENNKNRTHFSKR 402
Query: 138 AAV--VNRMLQKKELPKLSEGFSRI 160
+++ + + P EGF +I
Sbjct: 403 VGKIPIHKFFKDYQAPTEQEGFDQI 427
>gi|409052168|gb|EKM61644.1| hypothetical protein PHACADRAFT_51353, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 774
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 70/161 (43%), Gaps = 10/161 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
L I VG PGSGKS ++ W I QD ++G + C T+ SSA K + V
Sbjct: 396 LFIFVGLPGSGKSWVSRSLLARDPGGWEWISQD-----EAGGRSACETAISSARGKVR-V 449
Query: 82 FLDRCNLEREQR-TDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
LDRCN+ R+ R V+ V D A+LC R+ R H GG+
Sbjct: 450 ILDRCNMSRDDRKAWLALAAHWAVNPVCVWFDYDAELCTYRAQNRAGHPTLPPGGRVRNA 509
Query: 141 VNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGP 181
+ +M + P L EGFS + + AA D L P
Sbjct: 510 IEQMQKMFVAPSLGEGFSALVTVHS---FAAASDLVERLSP 547
>gi|428161279|gb|EKX30756.1| hypothetical protein GUITHDRAFT_149691, partial [Guillardia theta
CCMP2712]
Length = 243
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI+ G PGSGKS + + R W + QD ++ ++ C S K GK V
Sbjct: 88 LVILCGLPGSGKSHVAKMMALRDER-WLVVSQD-----EARSRDACEQEVSRPGKHGK-V 140
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
LDRCN +RE R ++ L V D +LC++R+ +RI+H G + +
Sbjct: 141 ILDRCNPDREDRRRWLALAQWARKPICVHFDYEQQLCVARAQQRIDHPTLTPGRRVLTAI 200
Query: 142 NRMLQKKELPKLSEGF 157
M +K + P L EGF
Sbjct: 201 EAMGRKMDAPGLDEGF 216
>gi|449543691|gb|EMD34666.1| hypothetical protein CERSUDRAFT_116853 [Ceriporiopsis subvermispora
B]
Length = 304
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 10/166 (6%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARIC-QDTINKGKSGTKVQCLTSASSALKKG 78
Q+++++VG GSGKSTF + + + P R C QD + G + + +A AL++G
Sbjct: 27 QVVLLLVGLIGSGKSTFAQALEQHY--PQFRRCNQDDLG----GDRRRVEAAARHALRQG 80
Query: 79 KSVFLDRCNLEREQRTDFVKLGG--PEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGK 136
S +DR N++ EQR ++ + P V +VLD P + CI R +R +H +
Sbjct: 81 LSACIDRTNIDVEQRRTWINISREFPGTHVWVIVLDTPYETCIERLRERTDHPTIKTPQQ 140
Query: 137 AAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPL 182
++++R + P SEG +R+ L +D +A+ T +G +
Sbjct: 141 GFSILSRFRSQFAPPISSEGHTRL-LRLKPSDHPSAIYTPESVGAI 185
>gi|294887189|ref|XP_002772000.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239875908|gb|EER03816.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 194
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
++++ G P SGKST +H + + + R+CQD + +K + L L++G+SV
Sbjct: 1 MLMLCGLPCSGKSTLSQHFLVPAG--YVRVCQDVLK-----SKEKTLREVERLLEEGRSV 53
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGN-LQGGKAAA 139
LDR N ++ QR F+ L V VLD + C +R R HEG L + +
Sbjct: 54 VLDRTNTDKAQRAPFISLANRFNARVCVCVLDTERETCRARLKSREVHEGKPLTANQRNS 113
Query: 140 V---VNRMLQKKELPKLSEGFSRITLCQNENDVQ 170
+ + M ++ E P L EG I + ++V+
Sbjct: 114 LLIGLGMMTKRWESPTLEEGIDEIRVASTVDEVR 147
>gi|395335044|gb|EJF67420.1| ATP dependent DNA ligase [Dichomitus squalens LYAD-421 SS1]
Length = 870
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 11/161 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
L ++VG PGSGK+TF +M W I QD ++G++ C T+ + +G V
Sbjct: 492 LFVLVGLPGSGKTTFSRALMARDPHGWTYISQD-----EAGSRSACETAIGNM--RGGRV 544
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVV-LDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
LD CN+ R R +++ L V D LC+SR+ R H G +
Sbjct: 545 LLDCCNVSRSGRKEWLALASHWAKSPVCVWFDYDRDLCVSRAQNRAGHPTLPPGNRVRNA 604
Query: 141 VNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGP 181
+ +M P L+EGF I ++ AA + S L P
Sbjct: 605 MEQMHTTFVRPALAEGFKAIFTIRS---FAAAEELVSRLSP 642
>gi|390596712|gb|EIN06113.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 289
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Query: 21 ILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+++I+VG GSGKSTF E + R + R QD + K KV+ L A +L +G+S
Sbjct: 1 MVLILVGLIGSGKSTFAEALQRELPS-FVRCSQDELGNRK---KVEQL--ARESLAQGRS 54
Query: 81 VFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAA 139
V +DR N++ +QR+ ++ + V+ + D P C R R +H + +
Sbjct: 55 VCIDRTNMDAQQRSTWIAIARENRVEPWVLYFDTPYDSCQQRIRTRTDHPTITDPAQGLS 114
Query: 140 VVNRMLQKKELPKLSEGFSR 159
V+ R E P EG++R
Sbjct: 115 VLARFRNTYEPPNPREGYTR 134
>gi|321474170|gb|EFX85136.1| hypothetical protein DAPPUDRAFT_46356 [Daphnia pulex]
Length = 512
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 25/165 (15%)
Query: 19 KQILVIMVGAPGSGKSTFCE-HVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKK 77
KQ ++++VG PGSGKS F E H ++SS D IN+ GT +C + L
Sbjct: 353 KQEVILLVGFPGSGKSHFAEQHALQSSY--------DVINRDSLGTWQKCAAAVEKCLDA 404
Query: 78 GKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAK-LCISRSVKRIEHEGNLQGGK 136
GKSV +D N ++E R+ FV+L A LP + ++ ++ H +
Sbjct: 405 GKSVLIDNTNPDKESRSRFVRL--------ASTRGLPCRCFVMNTTMTHALHNNKFRELT 456
Query: 137 AA--AVVNRML-----QKKELPKLSEGFSRITLCQNENDVQAALD 174
A V+RM+ K + P L EGFS+I + ++A D
Sbjct: 457 DAKHVPVSRMIFNVHKSKYQEPSLDEGFSQIVRVNFQPKFRSAED 501
>gi|167524507|ref|XP_001746589.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774859|gb|EDQ88485.1| predicted protein [Monosiga brevicollis MX1]
Length = 1200
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSA-----RPWARICQDTINKGKSGTKVQCLTSASS 73
K L++M G GSGKSTF + +++ + +PW RI QD + K +C+ A
Sbjct: 569 KARLILMHGPSGSGKSTFVQLLLQEATAQNPEQPWIRISQDQLRTSK-----RCIAVAQE 623
Query: 74 ALKKGKSVFLDRCNLEREQRTDFVKLG---GPEVDVHAVVLDLPAKLCISRSVKRIEHEG 130
AL K +DR +L + QR F + G VDV V + CI R+ +R +HE
Sbjct: 624 ALAKRHVAVIDRTHLSQTQRAKFATIALDLGVPVDV--VSMQTSISDCIRRAQRRQDHE- 680
Query: 131 NLQGGKAAAVVNRMLQKKE--LPKLSEGFSRI 160
++ AA V+ + + P+ EGF I
Sbjct: 681 TVKPEDAARVIGMQTKAADCSAPEPHEGFRYI 712
>gi|300123307|emb|CBK24580.2| unnamed protein product [Blastocystis hominis]
Length = 224
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 10/137 (7%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LV++VG+P SGKST C+ R + R+ QDT+ T +C+ A+ LK+ SV
Sbjct: 67 LVLLVGSPASGKSTLCDEYFRE----YQRVNQDTLK-----TLPKCIQFATKWLKQKVSV 117
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N R+ R +++L V V AVVL+ L ++ R G Q
Sbjct: 118 VVDNTNPSRDIRRKWIQLARQCRVPVRAVVLESSRSLANHLNIFRSFGFGTTQRKVPRVA 177
Query: 141 VNRMLQKKELPKLSEGF 157
+N + E P SEGF
Sbjct: 178 MNVFFSRYETPSESEGF 194
>gi|145550193|ref|XP_001460775.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428606|emb|CAK93378.1| unnamed protein product [Paramecium tetraurelia]
Length = 386
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 12/142 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
++IM+GAPGSGKSTF + + R +N+ TK +CL A A+K+ K +
Sbjct: 227 MIIMIGAPGSGKSTFVHNHLNDYTR---------VNRDSLKTKEKCLKVAEQAIKEKKYL 277
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N + R F+KL + V L++ LC+ +R + K
Sbjct: 278 VIDNTNPTPDDRAAFIKLAQDNKYPVRGFFLEVSKDLCLHNDTQRDTNNFREHFSKKVGK 337
Query: 141 --VNRMLQKKELPKLSEGFSRI 160
+N + K P EGFS +
Sbjct: 338 MPINMIFSKVTPPTKDEGFSEV 359
>gi|195391794|ref|XP_002054545.1| GJ22749 [Drosophila virilis]
gi|194152631|gb|EDW68065.1| GJ22749 [Drosophila virilis]
Length = 528
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
++IMVG PGSGKS FC V+ A DT+ G+ CL + AL GKS
Sbjct: 372 MIIMVGLPGSGKSHFCAEVLGGKGYKIAN--ADTL-----GSTPACLNACQRALSAGKSC 424
Query: 82 FLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAA-- 138
+D NL+ R FV+L V V+++ A +++ I + L G ++
Sbjct: 425 VVDNTNLDVASRKKFVELAVAKNVPCRCFVMNVTA----AQAKHNIAYRELLDTGHSSIN 480
Query: 139 -AVVNRMLQKKELPKLSEGFSRI 160
V N M +K ++P L EGF+ I
Sbjct: 481 DMVFNMMKKKYQVPTLDEGFTTI 503
>gi|296412196|ref|XP_002835811.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629606|emb|CAZ79968.1| unnamed protein product [Tuber melanosporum]
Length = 906
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHV-MRSSA----RPWARICQDTINKGKSGTKVQCLTSASSALK 76
+++++G PG+GKS F +R+ A P A I Q++ + S + + A A K
Sbjct: 512 MILLIGLPGAGKSEFTRLCRLRNPALTVLSPDA-ITQESPSTAGSASARKVCECAVGAFK 570
Query: 77 KG-------KSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHE 129
KG K + LDRCN +R +V+L +V AV LD P+++C SR+ R H
Sbjct: 571 KGTGSGGHRKVLLLDRCNPTSAERKYWVQLLTSGGEVVAVFLDYPSEVCRSRAENRSSHP 630
Query: 130 GNLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDT 175
L +AA ++ + + P L+EG+S I + + DT
Sbjct: 631 -TLPPYRAAGAISSIQAAMQAPTLTEGYSGIARVTSIRSARELADT 675
>gi|169845563|ref|XP_001829501.1| ATP dependent DNA ligase [Coprinopsis cinerea okayama7#130]
gi|116509566|gb|EAU92461.1| ATP dependent DNA ligase [Coprinopsis cinerea okayama7#130]
Length = 870
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 11/170 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LV++VG PGSGK+ + ++ + W RI QD SG++ C T KG+ V
Sbjct: 489 LVMLVGLPGSGKTWVSKSLVARNPNGWQRISQD-----DSGSRSFCETEIGRK-PKGR-V 541
Query: 82 FLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
LDRCN+ R ++ L + V D +LC++R+ R +H G +
Sbjct: 542 LLDRCNMSAADRKAWLDLASNWCTNPVCVWFDYDRELCLARAQLRADHPTLPPGNRVRNA 601
Query: 141 VNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYS---GLGPLDTLPH 187
V++M + E P + EGF + + ++ + + +S G+ PH
Sbjct: 602 VDQMSKIFERPTVEEGFKAVLIVRSFTAARELVGLFSPPPGIYKFPRTPH 651
>gi|393240471|gb|EJD47997.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 256
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 9/144 (6%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
+ +++++ G GSGKST + + W R CQD + KS KV+ +A AL+ G
Sbjct: 16 RPVVLVLCGLVGSGKSTLAQALEEHFPETWTRCCQDEL---KSRRKVEA--AAREALQAG 70
Query: 79 KSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVL--DLPAKLCISRSVKRIEHEGNLQGGK 136
+DR N+ +QR +V + E +V A +L + P + C R + R H ++ G
Sbjct: 71 VCPVIDRTNVTADQRATWVDIAR-EFNVPAWLLFVNTPPEQCAQRVLLRRGHP-TVEDGT 128
Query: 137 AAAVVNRMLQKKELPKLSEGFSRI 160
++ R E P SEGF+R+
Sbjct: 129 GIGLIRRFGASFEPPHHSEGFARV 152
>gi|195452506|ref|XP_002073383.1| GK14099 [Drosophila willistoni]
gi|194169468|gb|EDW84369.1| GK14099 [Drosophila willistoni]
Length = 522
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 11/141 (7%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
++IMVG PGSGKS FC+ ++ + + + + DT+ G+ CL ++ ALK G S
Sbjct: 366 MIIMVGLPGSGKSHFCQEIL--TGKKYKILNADTL-----GSVQSCLAASERALKSGTSC 418
Query: 82 FLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDL-PAKLCISRSVKRIEHEGNLQGGKAAA 139
+D N++ R F+ L G V + V+++ P + + ++ E
Sbjct: 419 VIDNTNVDVASRKKFINLANGLNVPIRCFVMNVTPGQ--VKHNIAYRELSDANHSKINDM 476
Query: 140 VVNRMLQKKELPKLSEGFSRI 160
V N M +K + P L EGF+ I
Sbjct: 477 VFNMMKKKYQAPTLEEGFASI 497
>gi|328857198|gb|EGG06316.1| hypothetical protein MELLADRAFT_106856 [Melampsora larici-populina
98AG31]
Length = 250
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 7 DTCKAKDEEKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQ 66
+ K +D++K Q ++I+ G GSGKSTF V+ S + RI QD + GT+ +
Sbjct: 17 NVTKGQDDKK---QRMLILCGLVGSGKSTFANAVV-SFDSSYVRISQDVL-----GTRQE 67
Query: 67 CLTSASSALKKGKSVFLDRCNLEREQRTDFVKLGGPE-------VDVHAVVLDLPAKLCI 119
C +L++G SV +DR N + +QR+ ++++G V + + + P C
Sbjct: 68 CERITRRSLREGLSVIIDRQNFDLQQRSKWIQIGLEYRRESHRFVTIDLIEFNTPVLECS 127
Query: 120 SRSVKRIEHEGNLQGGKAAAVVNRMLQKKELPKLSEGFSR 159
+R R +HE +A ++ ++ P SEG+ R
Sbjct: 128 NRLNVRTDHETLKNVNEAQGILRLGIKNWVPPHPSEGYER 167
>gi|328875826|gb|EGG24190.1| SAP DNA-binding domain-containing protein [Dictyostelium
fasciculatum]
Length = 598
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 80/163 (49%), Gaps = 27/163 (16%)
Query: 19 KQILVIMVGAPGSGKSTFCE-HVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKK 77
+Q LVIMVG P SGKSTF E H + + ++R+ +DT+ TK C + AL +
Sbjct: 442 RQELVIMVGLPASGKSTFTETHFVPAG---YSRVNRDTLK-----TKEACYKACQFALDQ 493
Query: 78 GKSVFLDRCNLEREQRTDFV----KLGGP-EVDVHAVVLDLPAKLCISRSVKR-IEHEGN 131
GKSV +D N +E R F+ KLG P LDL L R K+ ++H N
Sbjct: 494 GKSVVIDNTNPSKEDRKVFIDMAKKLGIPIRCFRMNTPLDLAQHLNYFRERKQGVKHVPN 553
Query: 132 LQGGKAAAVVNRMLQKKELPKLSEGFSRIT-----LCQNENDV 169
+ + N+ LQ+ P+L+EG I L N NDV
Sbjct: 554 I----GYNMFNKYLQE---PQLNEGIDEINHVNFILNINPNDV 589
>gi|451927532|gb|AGF85410.1| phosphatase/kinase [Moumouvirus goulette]
Length = 398
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 19/158 (12%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
K+ ++I++G PGSGKS F R P + IN+ TK++C+ AL +
Sbjct: 234 KKEMIILIGPPGSGKSYFT----RKYILPHNYVY---INRDTCKTKIKCINETKKALTEN 286
Query: 79 KSVFLDRCN---LEREQRTDFVKLGGPEVDVHAVVLDLPAKLCIS-RSVKRIEHEGNLQG 134
KSV +D N L R + T F K G + ++ A++++ KL +V+ I G++
Sbjct: 287 KSVVIDNTNPDVLSRMEYTSFAKDNGYK-NIRAIIINTDDKLYKHLNNVRHIYSNGDIP- 344
Query: 135 GKAAAVVNRMLQKKEL-PKLSEGFSRIT----LCQNEN 167
K + + R+ + K + P+ +EGF +I + +N+N
Sbjct: 345 -KVSDIAYRIYKNKYISPQKTEGFDKIETVNFIIENDN 381
>gi|392871327|gb|EAS33222.2| polynucleotide kinase 3'-phosphatase [Coccidioides immitis RS]
Length = 443
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q LVI G+PG+GKSTF + + R+ QD + T+ +CL+ A+ L+ G
Sbjct: 281 QELVIFCGSPGAGKSTFFWKYLEPLK--YKRVNQDILK-----TRPKCLSVAAEYLQAGD 333
Query: 80 SVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLC-----ISRSVKRIEHEGNLQ 133
SV +D N + E R +VKL +V + V L PA +C + + R+E +
Sbjct: 334 SVAVDNTNADPETRAYWVKLAKEHDVPIRCVYLSTPASICAHNNAVRAANPRLESLNPEK 393
Query: 134 GGKAAAVVNRMLQKK-ELPKLSEGFSRI 160
V R + E P+LSEGF I
Sbjct: 394 RTFLPDVAFRSFASRFEKPQLSEGFEDI 421
>gi|290979930|ref|XP_002672686.1| predicted protein [Naegleria gruberi]
gi|284086264|gb|EFC39942.1| predicted protein [Naegleria gruberi]
Length = 176
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
L+I G PGSGKSTF E + + S + R+ QDT+ G +C + K KSV
Sbjct: 20 LIICCGFPGSGKSTFSEQLEKKSTN-FVRVNQDTL-----GDASECKKVMEKSFKHNKSV 73
Query: 82 FLDRCNLEREQR----TDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKA 137
LDRCN+ + R T+ KLG +D+ V + C +VK ++ LQ KA
Sbjct: 74 ILDRCNIHPKDRKMWITEAKKLGVKHIDL--VWFATTPEQC-KLNVKSRKNHPTLQADKA 130
Query: 138 AAVVNRMLQKKELPKLSEG-FSRITLCQNENDVQAALDT 175
VV+ + + P+ EG + + +E + Q + T
Sbjct: 131 DEVVDEFAKGFKPPQQYEGPYEHLYQVNSEKESQDIVKT 169
>gi|342319361|gb|EGU11310.1| Hypothetical Protein RTG_02782 [Rhodotorula glutinis ATCC 204091]
Length = 297
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
+Q ++++ G GSGKST + + R W R+ QD + G + C + L++G
Sbjct: 11 RQEMIVLAGVVGSGKSTLSQRWEQLMKR-WVRVNQDDL-----GDRRTCENMVRTRLREG 64
Query: 79 KSVFLDRCNLEREQRTDFVKLGG--PEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGK 136
SV +DR N + QR +V++ PEV+V +V+ C R + R +H
Sbjct: 65 YSVLVDRQNFDAGQRRTWVEIASEFPEVEVGCMVMGTSKDDCRERLLVRRDHPTIDNPDL 124
Query: 137 AAAVVNRMLQKKELPKLSEGFSRI 160
A ++++ + P L EGF R+
Sbjct: 125 AVQLLDKFSSLWQEPTLDEGFDRL 148
>gi|443920997|gb|ELU40806.1| ATP dependent DNA ligase [Rhizoctonia solani AG-1 IA]
Length = 993
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 78/182 (42%), Gaps = 29/182 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMR-------------SSARPWARICQDTINKGKSGTKVQCL 68
L+++ G PGSGKS F + V+R S +R W + QD +S ++ C
Sbjct: 596 LLVLCGLPGSGKSWFSQAVVRRGGFLGKDSGGSRSPSRSWRIVSQD-----ESRSRAACE 650
Query: 69 TSASSALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEH 128
T S A + G LDRCN E+R ++KL V D +LCI R+ R H
Sbjct: 651 TDISRAGQPGSRAVLDRCNPTSEERRLWIKLASWAQHPIVVWFDYKPQLCIDRAQDRESH 710
Query: 129 EGNLQGGK---AAAVVNRMLQKKELPKLS--EGFSRITLCQNENDVQAALDTYSGLGPLD 183
G + A +NR Q KL GF+ IT +AA+D + P +
Sbjct: 711 PTLTPGPRVLTAVTSMNRSFQPPSEWKLEGFRGFAHIT------SFEAAIDLCKIVCPAE 764
Query: 184 TL 185
L
Sbjct: 765 IL 766
>gi|328865353|gb|EGG13739.1| hypothetical protein DFA_11500 [Dictyostelium fasciculatum]
Length = 567
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 13/192 (6%)
Query: 279 LAFPSLSTSDFQFNNEKASDVIIEKVEEFVNKLGNARLVLVDLTQGSKILSLVRAKAAQK 338
L FP +ST + F+ +KA+DV ++ E++N + + + I S +K
Sbjct: 375 LTFPFISTFIYNFDAKKATDVAGPEIAEYLNVHKGEDDIKLIMVVDKSIYSQTLVNDFKK 434
Query: 339 HINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA 398
+IN K+F DIT A WRLK N ++ AG V
Sbjct: 435 YINDKRFEIKSFDITNDKDQFKTDTRFYATETTWRLK--RTAQNKILYDIAG----VEEL 488
Query: 399 ER-AKSLYP-----GNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKG 452
E+ K+ YP G V L + L G+ + ++GPN+N ++P+CL D+ +
Sbjct: 489 EKNTKTKYPNTGKAGCIYPVTLDVDNVLHSEYGMDALFLLIGPNLNDKKPDCL-HDHEEA 547
Query: 453 CEILRKAYTSLF 464
+L Y LF
Sbjct: 548 TPVLADTYRQLF 559
>gi|340380951|ref|XP_003388985.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase-like
[Amphimedon queenslandica]
Length = 408
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 10/144 (6%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
+Q +V++VG P SGK+T + + R + ++ +DT+ GTK +CL A+ LK
Sbjct: 249 EQEVVLLVGRPASGKTTVAKRYF--TPRGYTQVNRDTL-----GTKEKCLKVAAEGLKNK 301
Query: 79 KSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKA 137
KS+ +D N +RE R ++ L V V + L + +L ++ R ++ +
Sbjct: 302 KSIVVDNTNPKREDRKAYIDLAKKSSVPVRCIRLKVSPELSYHLNMYRQNKSKGVE-RRV 360
Query: 138 AAVVNRMLQKK-ELPKLSEGFSRI 160
V R K E PK+SEGFS +
Sbjct: 361 PMVAYRTFDKYFEEPKVSEGFSEV 384
>gi|392558431|gb|EIW51619.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 307
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
+QI++I+VG GSGKSTF E + R P R C N+ + G + + A L G
Sbjct: 29 RQIVLILVGLIGSGKSTFAEALERYF--PDFRRC----NQDELGDRRRVEALARRTLSDG 82
Query: 79 KSVFLDRCNLEREQRTDFVKLGG--PEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGK 136
SV +DR N + QR +++ + + + VV D P ++C +R R H +
Sbjct: 83 FSVCIDRTNFDESQRANWINIAREFAQAEPWVVVFDTPFEVCAARISTRTGHPTITSPQQ 142
Query: 137 AAAVVNRMLQKKELPKLSEGFSRI 160
V+ R + P EG +RI
Sbjct: 143 GMEVLRRFRSQFRPPAPHEGHTRI 166
>gi|320038110|gb|EFW20046.1| polynucleotide kinase 3'-phosphatase [Coccidioides posadasii str.
Silveira]
Length = 443
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q LVI G+PG+GKSTF + + R+ QD + T+ +CL+ A+ L+ G
Sbjct: 281 QELVIFCGSPGAGKSTFFWKYLEPLK--YKRVNQDILK-----TRPKCLSVAAEYLQAGD 333
Query: 80 SVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLC-----ISRSVKRIEHEGNLQ 133
SV +D N + E R +VKL +V + V L PA +C + + R+E +
Sbjct: 334 SVAVDNTNADPETRAYWVKLAKDHDVPIRCVYLSTPASICAHNNAVRAANPRLESLNPEK 393
Query: 134 GGKAAAVVNRMLQKK-ELPKLSEGFSRI 160
V R + E P+LSEGF I
Sbjct: 394 RTFLPDVAFRSFASRFEKPQLSEGFEDI 421
>gi|303316630|ref|XP_003068317.1| DNA 3'-phosphatase family protein [Coccidioides posadasii C735
delta SOWgp]
gi|240107998|gb|EER26172.1| DNA 3'-phosphatase family protein [Coccidioides posadasii C735
delta SOWgp]
Length = 456
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q LVI G+PG+GKSTF + + R+ QD + T+ +CL+ A+ L+ G
Sbjct: 294 QELVIFCGSPGAGKSTFFWKYLEPLK--YKRVNQDILK-----TRPKCLSVAAEYLQAGD 346
Query: 80 SVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLC-----ISRSVKRIEHEGNLQ 133
SV +D N + E R +VKL +V + V L PA +C + + R+E +
Sbjct: 347 SVAVDNTNADPETRAYWVKLAKDHDVPIRCVYLSTPASICAHNNAVRAANPRLESLNPEK 406
Query: 134 GGKAAAVVNRMLQKK-ELPKLSEGFSRI 160
V R + E P+LSEGF I
Sbjct: 407 RTFLPDVAFRSFASRFEKPQLSEGFEDI 434
>gi|428185989|gb|EKX54840.1| hypothetical protein GUITHDRAFT_99490 [Guillardia theta CCMP2712]
Length = 204
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 75/149 (50%), Gaps = 12/149 (8%)
Query: 21 ILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+L++ G PGSGK+T + + ++ W I QDT+ G++ C+ +A++AL +
Sbjct: 54 MLLVFCGIPGSGKTTLADRLRQNG---WVIISQDTL-----GSREACIDAAAAALGDKRR 105
Query: 81 VFLDRCNLEREQRTDFVKLGG----PEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGK 136
V +DR N++ QR +++LG + ++ +C R + R H K
Sbjct: 106 VAIDRTNIDEYQRAHWIRLGKQRGLSRQQIAVMLFQAHPDVCCDRVMSRRGHPTLGPNKK 165
Query: 137 AAAVVNRMLQKKELPKLSEGFSRITLCQN 165
+ +V + Q + P+ EGF ++ +C++
Sbjct: 166 SLGIVRKFAQSFQQPREEEGFGKMFVCRD 194
>gi|195330722|ref|XP_002032052.1| GM26347 [Drosophila sechellia]
gi|194120995|gb|EDW43038.1| GM26347 [Drosophila sechellia]
Length = 523
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 23/147 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVIMVG PGSGKS FC +S R + + DT+ G+ CLT+ L G+S
Sbjct: 367 LVIMVGLPGSGKSHFCSSFFQS--RGYKIVNADTL-----GSTQNCLTACKRFLDSGQSC 419
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAK-LCISRSVKRIEHEGNLQGGKAAA- 139
+D N++ R F++L ++ +P + L +S SV +++H + +A
Sbjct: 420 VVDNTNVDVASRKKFLQLASDKM--------IPCRCLVMSVSVAQVKHNIAFRELSDSAR 471
Query: 140 ------VVNRMLQKKELPKLSEGFSRI 160
V N M +K + P L EGF I
Sbjct: 472 PKIKDMVFNMMKKKYQEPALDEGFISI 498
>gi|164423605|ref|XP_959562.2| hypothetical protein NCU08151 [Neurospora crassa OR74A]
gi|157070164|gb|EAA30326.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 484
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 16/143 (11%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q LV+ VG PG+GKSTF ++ + R+ QD + +K +CL +A+ LK+G
Sbjct: 336 QELVLFVGPPGAGKSTFYWRHLKPLG--FERVNQDVLK-----SKDKCLKAATEYLKEGD 388
Query: 80 SVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAA 138
SV +D N + + R +V+L + V V V P +C EH ++
Sbjct: 389 SVVVDNTNPDPDTRKQWVELAKKQGVPVRCVWFRTPLVVC--------EHNDAVRALNKP 440
Query: 139 AVVNRMLQKKELPKLSEGFSRIT 161
N + + PK+ EGF +T
Sbjct: 441 LAFNSFNSRFKEPKVKEGFQDVT 463
>gi|324512422|gb|ADY45147.1| Unknown [Ascaris suum]
Length = 412
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
KQ ++++VG PG GKSTF E + + +N+ T +C+ +A L+KG
Sbjct: 251 KQEVIVLVGYPGCGKSTFAEKIAKEHG-------YGIVNRDSMKTWQKCVQNAKIYLQKG 303
Query: 79 KSVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKA 137
+SV +D N + E R + +L VD V + + R+ + +
Sbjct: 304 QSVIIDNTNGDTESRKRYCELAKSRNVDCRCFVFACGMEQAMHHCKYRVIVGTDTVHQEV 363
Query: 138 AAVVNRMLQKK-ELPKLSEGFSRI 160
A+V RM + K + PKL EGFS I
Sbjct: 364 GAMVLRMFKSKYQEPKLEEGFSSI 387
>gi|336467647|gb|EGO55811.1| hypothetical protein NEUTE1DRAFT_103221 [Neurospora tetrasperma
FGSC 2508]
Length = 472
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 16/143 (11%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q L++ VG PG+GKSTF ++ + R+ QD + +K +CL +A+ LK+G
Sbjct: 324 QELILFVGPPGAGKSTFYWRHLKPLG--FERVNQDVLK-----SKDKCLKAATEYLKEGD 376
Query: 80 SVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAA 138
SV +D N + + R +V+L + V V V P +C EH ++
Sbjct: 377 SVVVDNTNPDPDTRKQWVELAKKQGVPVRCVWFRTPLVVC--------EHNDAVRALNKP 428
Query: 139 AVVNRMLQKKELPKLSEGFSRIT 161
N + + PK+ EGF +T
Sbjct: 429 LAFNSFNARFKEPKVKEGFQDVT 451
>gi|312194468|ref|YP_004014529.1| bis(5'-nucleosyl)-tetraphosphatase [Frankia sp. EuI1c]
gi|311225804|gb|ADP78659.1| Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) [Frankia sp.
EuI1c]
Length = 910
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 40/202 (19%)
Query: 4 DIDDTCKAKDEEKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINK 58
DI +TC LV++VG GSGKSTF + + C+ D ++
Sbjct: 22 DIPETC------------LVVLVGVSGSGKSTFARTHFAPTQVLSSDFCRGLVADDENDQ 69
Query: 59 GKSGTKVQCLTS-ASSALKKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAK 116
+G + L A L G+ +D N++ R V+L +V A+VLDLP +
Sbjct: 70 AATGDAFEVLHYIAGKRLAAGRLTVVDATNVQSRARQPLVELARRHDVLPVAIVLDLPEQ 129
Query: 117 LCISRSVKRIEHEGNLQGGKAAAVVNRMLQKKELPK-----LSEGFSRITLCQNENDVQA 171
+C++R+ R + + AAV+ R Q+ EL + EGF R+ + ++E +V A
Sbjct: 130 VCLARNSARPDRDFG------AAVIRR--QRSELRRSMKGLAREGFRRVHVLRSEAEVAA 181
Query: 172 ALDTYSGL--------GPLDTL 185
A +Y+ L GP D +
Sbjct: 182 ATISYTRLFTDLRHETGPFDVI 203
>gi|170105100|ref|XP_001883763.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641398|gb|EDR05659.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 325
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q+++I+ G GSGKSTF E + S P R C N+ G + + A +L +G
Sbjct: 29 QVVLILCGLIGSGKSTFAESLQ--SHFPQFRRC----NQDDLGDRRRVEHLARDSLSQGL 82
Query: 80 SVFLDRCNLEREQRTDFVKLGG--PEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKA 137
SV +DR N QR+ ++ + P + +V D P ++C +R +R H +
Sbjct: 83 SVCIDRTNFNESQRSYWIDIAHEFPGTAIWVIVFDTPYEICAARLRERKSHPTIKSPEQG 142
Query: 138 AAVVNRMLQKKELPKLSEGFSRI 160
+V+ R P EG+ RI
Sbjct: 143 LSVLKRFAADFVSPDPHEGYQRI 165
>gi|195144816|ref|XP_002013392.1| GL24116 [Drosophila persimilis]
gi|194102335|gb|EDW24378.1| GL24116 [Drosophila persimilis]
Length = 522
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 25/148 (16%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
++IMVG PGSGKS FC V++S R + + DT+ G+ CL + L GKS
Sbjct: 366 MIIMVGLPGSGKSHFCAEVLQS--RGYEIVNADTL-----GSTQSCLNTCKRLLSSGKSC 418
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNL--------- 132
+D N++ R F+ L G L +P + C +V + + N+
Sbjct: 419 VVDNTNVDAASRKKFLALAGE--------LKVPCR-CFVMNVSTAQVKHNIAFRELLETP 469
Query: 133 QGGKAAAVVNRMLQKKELPKLSEGFSRI 160
+ V N M +K + P L EGF+ I
Sbjct: 470 HSQISDMVFNMMKKKYKEPTLDEGFATI 497
>gi|328875824|gb|EGG24188.1| SAP DNA-binding domain-containing protein [Dictyostelium
fasciculatum]
Length = 783
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 80/163 (49%), Gaps = 27/163 (16%)
Query: 19 KQILVIMVGAPGSGKSTFCE-HVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKK 77
+Q LVIMVG P SGKSTF E H + + ++R+ +DT+ TK C + AL +
Sbjct: 627 RQELVIMVGLPASGKSTFTETHFVPAG---YSRVNRDTLK-----TKEACYKACQFALDQ 678
Query: 78 GKSVFLDRCNLEREQRTDFV----KLGGP-EVDVHAVVLDLPAKLCISRSVKR-IEHEGN 131
GKSV +D N +E R F+ KLG P LDL L R K+ ++H N
Sbjct: 679 GKSVVIDNTNPSKEDRKVFIDMAKKLGLPIRCFRMNTPLDLAQHLNYFRERKQGVKHVPN 738
Query: 132 LQGGKAAAVVNRMLQKKELPKLSEGFSRIT-----LCQNENDV 169
+ + N+ LQ+ P+L+EG I L N NDV
Sbjct: 739 I----GYNMFNKCLQE---PQLNEGIDEINHVNFILNINPNDV 774
>gi|125775199|ref|XP_001358851.1| GA21905 [Drosophila pseudoobscura pseudoobscura]
gi|54638592|gb|EAL27994.1| GA21905 [Drosophila pseudoobscura pseudoobscura]
Length = 521
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 25/148 (16%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
++IMVG PGSGKS FC V++S R + + DT+ G+ CL + L GKS
Sbjct: 365 MIIMVGLPGSGKSHFCAEVLQS--RGYEIVNADTL-----GSTQSCLNTCKRLLSSGKSC 417
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNL--------- 132
+D N++ R F+ L G L +P + C +V + + N+
Sbjct: 418 VVDNTNVDAASRKKFLALAGE--------LKVPCR-CFVMNVSTAQVKHNIAFRELLETP 468
Query: 133 QGGKAAAVVNRMLQKKELPKLSEGFSRI 160
+ V N M +K + P L EGF+ I
Sbjct: 469 HSQISDMVFNMMKKKYKEPTLDEGFATI 496
>gi|194903951|ref|XP_001980972.1| GG17452 [Drosophila erecta]
gi|190652675|gb|EDV49930.1| GG17452 [Drosophila erecta]
Length = 523
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+VIMVG PGSGKS FC +S R + + DT+ G+ CLT+ L G+S
Sbjct: 367 MVIMVGLPGSGKSHFCSGFFQS--RGYKIVNADTL-----GSTQNCLTACKRFLDSGQSC 419
Query: 82 FLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N++ R F++L + + +V+++P + ++ E V
Sbjct: 420 VVDNTNVDAASRKKFLQLASDKGIPCRCLVMNVPVAQ-VKHNIAFRELSDTSHSKIKDMV 478
Query: 141 VNRMLQKKELPKLSEGFSRI 160
N M +K + P L EGF I
Sbjct: 479 FNMMKKKYQEPALDEGFESI 498
>gi|429242338|ref|NP_593635.2| DNA kinase/phosphatase Pnk1 [Schizosaccharomyces pombe 972h-]
gi|380865409|sp|O13911.2|PNK1_SCHPO RecName: Full=Bifunctional polynucleotide phosphatase/kinase;
AltName: Full=DNA 5'-kinase/3'-phosphatase; AltName:
Full=Polynucleotide kinase-3'-phosphatase; Includes:
RecName: Full=Polynucleotide 3'-phosphatase; AltName:
Full=2'(3')-polynucleotidase; Includes: RecName:
Full=Polynucleotide 5'-hydroxyl-kinase
gi|347834106|emb|CAB11157.2| DNA kinase/phosphatase Pnk1 [Schizosaccharomyces pombe]
Length = 408
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q +V++VG P SGKST E + + + R+ QD + TK +C+ +A ALKK K
Sbjct: 256 QEIVVLVGFPSSGKSTLAESQIVTQG--YERVNQDILK-----TKSKCIKAAIEALKKEK 308
Query: 80 SVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAA 138
SV +D N E R ++ + E+ + + L +L +V R H Q + A
Sbjct: 309 SVVIDNTNPTIESRKMWIDIAQEFEIPIRCIHLQSSEELARHNNVFRYIHHNQKQLPEIA 368
Query: 139 AVVNRMLQKKELPKLSEGFSRI 160
N + ++P + EGF+ +
Sbjct: 369 --FNSFKSRFQMPTVEEGFTNV 388
>gi|351737621|gb|AEQ60656.1| Polynucleotide phosphatase/kinase [Acanthamoeba castellanii
mamavirus]
Length = 403
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
K+ +++M+G PGSGKS F ++ + + + I QD K TK +CL+ +AL KG
Sbjct: 239 KKEMIVMIGQPGSGKSFFVKNYILPNG--YVHINQD-----KCKTKAKCLSETENALSKG 291
Query: 79 KSVFLDRCNLEREQRTDFVKLGGPEV--DVHAVVLDLPAKLCIS-RSVKRIEHEGNLQGG 135
KSV +D N + R + L V A++++ P +L +V+ I G +
Sbjct: 292 KSVVIDNTNPDVISRMTYTNLAKENNYDHVRAIIMETPDELAKHLNNVRHIYSSGTVP-- 349
Query: 136 KAAAVVNRMLQKKE-LPKLSEGFSRI 160
K + + +K LP+ E F +I
Sbjct: 350 KVTDIAYNIYRKNFVLPQYEENFDKI 375
>gi|407928727|gb|EKG21577.1| HAD-superfamily hydrolase subfamily IIIA [Macrophomina phaseolina
MS6]
Length = 537
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 31/180 (17%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+VI+ G+PG+GKSTF ++ + RI QD + T+ +CL A+ L +GKSV
Sbjct: 294 IVILCGSPGAGKSTFYWKHLKPLG--YERINQDILK-----TRDKCLKVAADYLGEGKSV 346
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N + + R +V+L V + V+ AKLC EH ++ AA+
Sbjct: 347 AIDNTNADPDTRAHWVRLAEKHHVPIRCVLFTATAKLC--------EHNDAVRALNGAAL 398
Query: 141 ---VNRMLQK---------KELPKLSEGFSRITLCQNENDVQAALDT---YSGLGPLDTL 185
ML K +P+L EGF IT +++ A D+ ++ P+ L
Sbjct: 399 NPEARSMLPKLAFTSFASRYRVPQLKEGFQDITKVDFMLELRHAHDSGMFWATANPMQVL 458
>gi|66799981|ref|XP_628916.1| hypothetical protein DDB_G0293866 [Dictyostelium discoideum AX4]
gi|60462278|gb|EAL60504.1| hypothetical protein DDB_G0293866 [Dictyostelium discoideum AX4]
Length = 563
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 20/204 (9%)
Query: 278 TLAFPSLSTSDFQFNNEKASDVIIEKVEEFVNKLGNARLVLVDLTQGSKILSLVRAKAAQ 337
+LAFP +STS F FN + A+++ + E+++ + + + I S ++ +
Sbjct: 363 SLAFPFISTSTFGFNIDDATEISANAISEYLHFHEKEDDIKLKMMVEKSIYSDNLIQSFK 422
Query: 338 KHINPK---KFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALE 394
KH N K +F + + L C + A + WRLK N ++ L+
Sbjct: 423 KHFNDKWDKRFEIIKIENSNSLEQFNLGCKLFATESTWRLKKTPQ--NKQLYEM----LD 476
Query: 395 VATAER-AKSLYP-----GNSVIVPLPSTSPLCG-----REGVTHVIHVLGPNMNPRRPN 443
T E+ K+LYP G + L + L G+ VI VLG NMNP +P+
Sbjct: 477 TGTFEKVTKNLYPNCGKIGKVYPISLQNNKQLVNSILHKEYGIDIVILVLGVNMNPNKPD 536
Query: 444 CLDGDYVKGCEILRKAYTSLFEGF 467
+ +L + Y SLF
Sbjct: 537 AFKENSELAKPLLLETYHSLFNAL 560
>gi|311977856|ref|YP_003986976.1| putative bifunctional polynucleotide phosphatase/kinase
[Acanthamoeba polyphaga mimivirus]
gi|82000143|sp|Q5UQD2.1|PNKP_MIMIV RecName: Full=Putative bifunctional polynucleotide
phosphatase/kinase; AltName: Full=DNA
5'-kinase/3'-phosphatase; AltName: Full=Polynucleotide
kinase-3'-phosphatase; Includes: RecName:
Full=Polynucleotide 3'-phosphatase; AltName:
Full=2'(3')-polynucleotidase; Includes: RecName:
Full=Polynucleotide 5'-hydroxyl-kinase
gi|55417085|gb|AAV50735.1| polynucleotide phosphatase/kinase [Acanthamoeba polyphaga
mimivirus]
gi|308204417|gb|ADO18218.1| putative bifunctional polynucleotide phosphatase/kinase
[Acanthamoeba polyphaga mimivirus]
gi|339061406|gb|AEJ34710.1| polynucleotide phosphatase/kinase [Acanthamoeba polyphaga
mimivirus]
gi|398257295|gb|EJN40903.1| polynucleotide phosphatase/kinase [Acanthamoeba polyphaga
lentillevirus]
Length = 421
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 15/147 (10%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
K+ +++M+G PGSGKS F ++ + + + I QD K TK +CL+ +AL KG
Sbjct: 257 KKEMIVMIGQPGSGKSFFVKNYILPNG--YVHINQD-----KCKTKAKCLSETENALSKG 309
Query: 79 KSVFLDRCN---LEREQRTDFVKLGGPEVDVHAVVLDLPAKLCIS-RSVKRIEHEGNLQG 134
KSV +D N + R T+ K + V A++++ P +L +V+ I G +
Sbjct: 310 KSVVIDNTNPDVISRMTYTNLAKENNYD-HVRAIIMETPDELAKHLNNVRHIYSSGTV-- 366
Query: 135 GKAAAVVNRMLQKKE-LPKLSEGFSRI 160
K + + +K LP+ E F +I
Sbjct: 367 PKVTDIAYNIYRKNFVLPQYEENFDKI 393
>gi|195572577|ref|XP_002104272.1| GD20873 [Drosophila simulans]
gi|194200199|gb|EDX13775.1| GD20873 [Drosophila simulans]
Length = 523
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 23/147 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+VIMVG PGSGKS FC +S R + + DT+ G+ CLT+ L G+S
Sbjct: 367 MVIMVGLPGSGKSHFCSSFFQS--RGYKIVNADTL-----GSTQNCLTACKRFLDSGQSC 419
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAK-LCISRSVKRIEHEGNLQGGKAAA- 139
+D N++ R F++L ++ +P + L +S V +++H + +A
Sbjct: 420 VVDNTNVDVASRKKFLQLASDKM--------IPCRCLVMSVPVAQVKHNIAFRELSDSAR 471
Query: 140 ------VVNRMLQKKELPKLSEGFSRI 160
V N M +K + P L EGF I
Sbjct: 472 PKIKDMVFNMMKKKYQEPALDEGFISI 498
>gi|428183369|gb|EKX52227.1| hypothetical protein GUITHDRAFT_102129 [Guillardia theta CCMP2712]
Length = 3186
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 16/151 (10%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
++++ G PGSGKS A W I++ + G+ C A+ LK G V
Sbjct: 2382 MLLVCGLPGSGKSLLASQF---EAAEWL-----VISEERMGSLQACEEQANYWLKFGHRV 2433
Query: 82 FLDRCNLEREQRTDFVKLGG----PEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKA 137
+D N+E ++R ++++ E V A++LD+P +C +R ++ + +
Sbjct: 2434 VIDAYNVEEQERARWIRVSRRCNLSEAAVVALLLDVPVHVCKNR----VQARESRSCKAS 2489
Query: 138 AAVVNRMLQKKELPKLSEGFSRITLCQNEND 168
A+V+R+ + P SEGF R+ + + E+D
Sbjct: 2490 LALVDRIASQLRRPTRSEGFGRVEVIKGEDD 2520
>gi|281209767|gb|EFA83935.1| SAP DNA-binding domain-containing protein [Polysphondylium pallidum
PN500]
Length = 550
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 63/149 (42%), Gaps = 18/149 (12%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q + +MVG P SGKSTF ++ ++ W +N+ T CL A LK GK
Sbjct: 395 QEMALMVGWPASGKSTFSKNNFVTAGYAW-------VNRDTLKTPQMCLAFAEQQLKAGK 447
Query: 80 SVFLDRCNLEREQRTDFVKLG---GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGK 136
SV +D N +E R +++L G +V + D S H QG K
Sbjct: 448 SVVIDNTNPNKEARRPYIELARKYGIQVRCFMMKTDR------ETSYHNNYHRERTQGVK 501
Query: 137 AAAVVNRMLQKK--ELPKLSEGFSRITLC 163
+ + K E P+L EGF I L
Sbjct: 502 HIPSIGYAMYNKQFEAPELLEGFKEIKLV 530
>gi|330791719|ref|XP_003283939.1| hypothetical protein DICPUDRAFT_26757 [Dictyostelium purpureum]
gi|325086097|gb|EGC39492.1| hypothetical protein DICPUDRAFT_26757 [Dictyostelium purpureum]
Length = 483
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 34/206 (16%)
Query: 278 TLAFPSLSTSDFQFNNEKASDVIIEKVEEFVNKLGNARLVLVDLTQGSKI-LSLVRAKAA 336
+LAFP +ST+ F+++ EKA+++ + + E+++ G I L ++ K+
Sbjct: 287 SLAFPFISTTTFEYDIEKATEIAAKAISEYLS---------FHEQDGDDIKLKMMVEKSV 337
Query: 337 ---QKHINPKKFFTFVGD----ITRLYTGGGL----C-CNVIANAANWRLKPGGGGVNAA 384
Q N KK F D I ++ L C C + A+ NWRLK N
Sbjct: 338 YSDQLIENFKKLFNNKWDKRFEIVKINNSNSLEQFNCNCKLFASETNWRLKKTPQ--NKV 395
Query: 385 IFSAAGPALEVATAERAKSLYP-----GNSVIVPLPSTSPLCGRE-GVTHVIHVLGPNMN 438
++ L+ + K+ +P G +P+ +++ + +E GV V+ VLGPNM+
Sbjct: 396 LYDEM---LDGQFEKETKNRFPNPGKIGKVYPIPISNSNCILKKEYGVETVVLVLGPNMS 452
Query: 439 PRRPNCLDGDYVKGCEILRKAYTSLF 464
++P+ DY + IL ++Y SLF
Sbjct: 453 EKKPDQF-KDYKEASPILLESYHSLF 477
>gi|56756973|gb|AAW26658.1| SJCHGC01177 protein [Schistosoma japonicum]
Length = 413
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 27/150 (18%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
L++MVG P SGKS FC V+ + + I++ GT +C+ + A K V
Sbjct: 258 LILMVGYPASGKSHFCNQVL-------IPLGYEVISRDNIGTWQKCVQAVEQATSKSLPV 310
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAA-- 139
+D N++ E R ++K+ A V D+P + I + IEH + + ++
Sbjct: 311 VVDNTNMDVESRARYIKI--------AKVWDIPVRCFIMETT--IEHAQHNERFRSLTNL 360
Query: 140 --------VVNRMLQKKELPKLSEGFSRIT 161
V N M K E P + EG+ I
Sbjct: 361 SHKPISQMVFNMMRSKYEKPTIEEGYQEIV 390
>gi|226478782|emb|CAX72886.1| polynucleotide kinase 3'-phosphatase [Schistosoma japonicum]
Length = 413
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 27/150 (18%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
L++MVG P SGKS FC V+ + + I++ GT +C+ + A K V
Sbjct: 258 LILMVGYPASGKSYFCNQVL-------IPLGYEVISRDNIGTWQKCVQAVEQATSKSLPV 310
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAA-- 139
+D N++ E R ++K+ A V D+P + I + IEH + + ++
Sbjct: 311 VVDNTNMDIESRARYIKI--------AKVWDIPVRCFIMETT--IEHAQHNERFRSLTNL 360
Query: 140 --------VVNRMLQKKELPKLSEGFSRIT 161
V N M K E P + EG+ I
Sbjct: 361 SHKPISQMVFNMMKSKYEKPTIEEGYQEIV 390
>gi|336380967|gb|EGO22119.1| hypothetical protein SERLADRAFT_451010 [Serpula lacrymans var.
lacrymans S7.9]
Length = 301
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 8/140 (5%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
+Q+++++VG SGKSTF E + + P R C N+ G++ + A L++G
Sbjct: 14 EQVVLVLVGLIASGKSTFAEALEQHF--PNVRRC----NQDDLGSRQKVEALARRCLRQG 67
Query: 79 KSVFLDRCNLEREQRTDFVKLGG--PEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGK 136
SV +DR N + QR+ ++ + P + V +V D P +C SR +R H
Sbjct: 68 LSVCIDRTNFDASQRSYWINIAREFPGISVWVIVFDCPQSVCASRLRERTVHPTIKDYEH 127
Query: 137 AAAVVNRMLQKKELPKLSEG 156
++++R + P +EG
Sbjct: 128 GLSILSRFASDFKSPSPNEG 147
>gi|156354081|ref|XP_001623231.1| predicted protein [Nematostella vectensis]
gi|156209909|gb|EDO31131.1| predicted protein [Nematostella vectensis]
Length = 158
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 9/141 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
L++MVG+PGSGK+TF + + + + RI +DT+ GT +C+++ +AL +GK V
Sbjct: 1 LIVMVGSPGSGKTTFAKEYL--VPKGYTRINRDTL-----GTWQKCVSACRAALSQGKHV 53
Query: 82 FLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLC-ISRSVKRIEHEGNLQGGKAAA 139
+D N ++E R +++ +V V V+D+ + + +V+ + + +
Sbjct: 54 VVDNTNPDQESRKRYIECAKHAKVPVRCFVMDISLEHAKHNNAVREMTNTDSSYKNVGFM 113
Query: 140 VVNRMLQKKELPKLSEGFSRI 160
N + P +SEGF I
Sbjct: 114 AFNSYKSSYKEPSVSEGFDEI 134
>gi|302687082|ref|XP_003033221.1| hypothetical protein SCHCODRAFT_107830 [Schizophyllum commune H4-8]
gi|300106915|gb|EFI98318.1| hypothetical protein SCHCODRAFT_107830, partial [Schizophyllum
commune H4-8]
Length = 235
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 57 NKGKSGTKVQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLGG--PEVDVHAVVLDLP 114
N+ G + + A ALK+G SV +DR N + QR ++ + G P VH +V D P
Sbjct: 30 NQDDLGDRREVERVARDALKRGLSVCIDRQNFDARQRATWIDIAGEFPGTVVHVIVFDTP 89
Query: 115 AKLCISRSVKRIEHEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRI 160
++C R V+R H KA +++R P+ EG+ R+
Sbjct: 90 YEICRERLVRRTGHPTVHTVEKALELLDRFTSMYRPPEPREGYQRL 135
>gi|340967045|gb|EGS22552.1| hypothetical protein CTHT_0021000 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 310
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 11/150 (7%)
Query: 15 EKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSA 74
EKK + ++++VG PG+GKSTF ++ + RI QD + +K +CL +A+ +
Sbjct: 146 EKKNDKDIILLVGPPGAGKSTFYWKHLKPLG--YERINQDLLK-----SKDKCLKAAAES 198
Query: 75 LKKGKSVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLC-ISRSVKRIEHEGNL 132
L+ G SV +D N + E R +V L V + V L P LC + +V+ + N
Sbjct: 199 LQGGDSVVVDNTNPDSETRAQWVALARKHGVPIRCVWLKTPLPLCEHNDAVRAFNKQLNP 258
Query: 133 QGGKAAA--VVNRMLQKKELPKLSEGFSRI 160
+ ++ N + + + P ++EGF +
Sbjct: 259 ENRQSLPKLAFNSFVSRFKEPTIAEGFQEV 288
>gi|300789902|ref|YP_003770193.1| protein phosphatase [Amycolatopsis mediterranei U32]
gi|384153419|ref|YP_005536235.1| protein phosphatase [Amycolatopsis mediterranei S699]
gi|399541782|ref|YP_006554444.1| protein phosphatase [Amycolatopsis mediterranei S699]
gi|299799416|gb|ADJ49791.1| protein phosphatase [Amycolatopsis mediterranei U32]
gi|340531573|gb|AEK46778.1| protein phosphatase [Amycolatopsis mediterranei S699]
gi|398322552|gb|AFO81499.1| protein phosphatase [Amycolatopsis mediterranei S699]
Length = 830
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 22 LVIMVGAPGSGKSTFCE-HV----MRSSARPWARICQDTINKGKSGTKVQCLT-SASSAL 75
LV++VGA GSGKSTF H + SS + D ++ S L A L
Sbjct: 10 LVVLVGASGSGKSTFARTHFAPTQVLSSDFFRGLVADDENDQSASADAFDALHFVAGKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDV--HAVVLDLPAKLCISRSVKRIEHE-GNL 132
G++ +D N++R R VKL E DV A+VLDLP +C +R+ R + + G+
Sbjct: 70 AAGRTTVIDATNVQRASRASLVKL-AKEHDVLPTAIVLDLPVAVCAARNTSRTDRDFGDH 128
Query: 133 QGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAA 172
+ + R L+ E EGF R+ + ++E +V A
Sbjct: 129 VIRRQRGELQRSLKSLE----REGFRRVHVLRSEAEVAGA 164
>gi|213406209|ref|XP_002173876.1| bifunctional polynucleotide phosphatase/kinase [Schizosaccharomyces
japonicus yFS275]
gi|212001923|gb|EEB07583.1| bifunctional polynucleotide phosphatase/kinase [Schizosaccharomyces
japonicus yFS275]
Length = 428
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
KQ +V+ VG P GKSTF E + S + + + QDT+ TK +CL A L++G
Sbjct: 273 KQEVVVFVGLPSCGKSTFFETQIASHSN-YIVVNQDTLK-----TKARCLKFAREQLEQG 326
Query: 79 KSVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKA 137
S+ +D N + + R D++ L + + + V+ P + +V R HE +
Sbjct: 327 HSIVVDATNPDEKTRKDWILLAKEKHLPIRCVLFTTPESVAKHNNVFRAIHERKTKLLPD 386
Query: 138 AAVVNRMLQKKELPKLSEGFSRIT 161
A + + +E P + EGF IT
Sbjct: 387 VAFASYKSRYQE-PTVKEGFQSIT 409
>gi|452958535|gb|EME63888.1| protein phosphatase [Amycolatopsis decaplanina DSM 44594]
Length = 830
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 22/164 (13%)
Query: 22 LVIMVGAPGSGKSTFCE-HV----MRSSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV++VGA GSGKSTF H + SS + D ++ S L A+ L
Sbjct: 10 LVVLVGASGSGKSTFARTHFAPTQVLSSDYFRGLVADDENDQSASAAAFDVLHYVAAKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDV--HAVVLDLPAKLCISRSVKRI-----EH 128
+ G+ +D N++R R +KL E DV A+VLDLP K+C R+ R EH
Sbjct: 70 EAGRITVIDATNVQRASRASLLKL-AKEYDVLPTAIVLDLPVKVCHERNESRPDRDFGEH 128
Query: 129 EGNLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAA 172
Q G+ ++R L+ E EGF R+ + ++E +V A
Sbjct: 129 VVRRQRGE----LHRSLKSLE----REGFRRVHVLRSEAEVAEA 164
>gi|240280135|gb|EER43639.1| polynucleotide kinase [Ajellomyces capsulatus H143]
Length = 476
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI G+PGSGKSTF + + R+ QD + ++ +CL +A L+ GKSV
Sbjct: 316 LVIFCGSPGSGKSTFYWRYLEPLG--YERVNQDILK-----SRPKCLKAAKEYLQAGKSV 368
Query: 82 FLDRCNLEREQRTDFVKLGG-PEVDVHAVVLDLPAKLCISRSVKRIEHEG------NLQG 134
+D N E R ++ L V + + L P ++C R + G +
Sbjct: 369 AVDNTNAGPETRAYWIDLAKETNVPIRCIYLSTPPQICKHNDTVRAANPGIESINPESRS 428
Query: 135 GKAAAVVNRMLQKKELPKLSEGFSRIT 161
++ ++P LSEGF IT
Sbjct: 429 SLPGIAFGDFQRRFQVPMLSEGFQDIT 455
>gi|325088856|gb|EGC42166.1| polynucleotide kinase [Ajellomyces capsulatus H88]
Length = 476
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI G+PGSGKSTF + + R+ QD + ++ +CL +A L+ GKSV
Sbjct: 316 LVIFCGSPGSGKSTFYWRYLEPLG--YERVNQDILK-----SRPKCLKAAKEYLQAGKSV 368
Query: 82 FLDRCNLEREQRTDFVKLGG-PEVDVHAVVLDLPAKLCISRSVKRIEHEG------NLQG 134
+D N E R ++ L V + + L P ++C R + G +
Sbjct: 369 AVDNTNAGPETRAYWIDLAKETNVPIRCIYLSTPPQICKHNDTVRAANPGIESINPESRS 428
Query: 135 GKAAAVVNRMLQKKELPKLSEGFSRIT 161
++ ++P LSEGF IT
Sbjct: 429 SLPGIAFGDFQRRFQVPMLSEGFQDIT 455
>gi|402223406|gb|EJU03470.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 271
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 72/146 (49%), Gaps = 9/146 (6%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
KQI++++ G GSGKSTF + SS P C N+ GT+ A S+L++G
Sbjct: 14 KQIVLVLCGLIGSGKSTFA--LFLSSHFPTFIRC----NQDDLGTRTAVYQLAESSLRQG 67
Query: 79 KSVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKA 137
SV +DRCN + EQR + +L V V A+ L+ ++C R + + A
Sbjct: 68 LSVCIDRCNFDPEQRRVWTELARKWGVSVWALGLNTSQEVCADRLLH-RPPHPTVPPHHA 126
Query: 138 AAVVNRMLQKKELPKLSEGFSRITLC 163
+++ R + P +E F RI LC
Sbjct: 127 LSILARFAHQYTPPTYAEDFDRI-LC 151
>gi|28573184|ref|NP_649792.3| CG9601 [Drosophila melanogaster]
gi|28381180|gb|AAF54229.2| CG9601 [Drosophila melanogaster]
gi|225543586|gb|ACN91305.1| FI07206p [Drosophila melanogaster]
Length = 523
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+VIMVG PGSGKS FC + R + + DT+ G+ CLT+ L G+S
Sbjct: 367 MVIMVGLPGSGKSHFCSSFFQ--PRGYKIVNADTL-----GSTQNCLTACKRFLDSGQSC 419
Query: 82 FLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N++ R F++L + + +V+++P + ++ E + + V
Sbjct: 420 VVDNTNVDAASRKKFLQLASEKMIPCRCLVMNVPVAQ-VKHNIAFRELSDSARTKIKDMV 478
Query: 141 VNRMLQKKELPKLSEGFSRI 160
N M +K + P L EGF I
Sbjct: 479 FNMMKKKYQEPALDEGFISI 498
>gi|281208528|gb|EFA82704.1| hypothetical protein PPL_04399 [Polysphondylium pallidum PN500]
Length = 504
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q LVIMVG P SGKSTF + ++ WA QDT+ K KVQ A L +GK
Sbjct: 343 QELVIMVGWPASGKSTFTKKHFIAAGYAWAN--QDTL---KVKAKVQKF--AEEQLSQGK 395
Query: 80 SVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAA 138
SV +D N + R +++ + V V + + + R E L
Sbjct: 396 SVVIDNTNPTKAARKEYINIAKRHGVQVRCFHMQTDRETSYHNNYHR---ERTLDVKHVP 452
Query: 139 AVVNRMLQKK-ELPKLSEGFSRI 160
+V M K E P+LSEGF I
Sbjct: 453 TMVYHMYNKNFEAPELSEGFKEI 475
>gi|225683633|gb|EEH21917.1| DNA kinase/phosphatase Pnk1 [Paracoccidioides brasiliensis Pb03]
Length = 486
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 14/154 (9%)
Query: 15 EKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSA 74
EKK LVI G+PGSGKSTF + + R+ QD + ++ CL +A
Sbjct: 304 EKKNDPELVIFCGSPGSGKSTFYWRCLEPLG--YERVNQDILK-----SRPNCLKAAREH 356
Query: 75 LKKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLC----ISRSVKRIEHE 129
LK G SV +D N + E R +++L V + + L+ P ++C RS
Sbjct: 357 LKVGNSVAVDNTNADSETRAYWIELAKEFSVPIRCIYLNTPLQICRHNDAVRSANPKMES 416
Query: 130 GNLQGGKA--AAVVNRMLQKKELPKLSEGFSRIT 161
N + A +++ P LSEGF IT
Sbjct: 417 LNPESRTALPGIAFGEFMRRFREPTLSEGFQDIT 450
>gi|164656717|ref|XP_001729486.1| hypothetical protein MGL_3521 [Malassezia globosa CBS 7966]
gi|159103377|gb|EDP42272.1| hypothetical protein MGL_3521 [Malassezia globosa CBS 7966]
Length = 170
Score = 57.4 bits (137), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 10/112 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LV+ G GSGK++ ++ W R CQD + +S + A ++L G+ V
Sbjct: 46 LVVFCGFVGSGKTSLAVEAAKTWPGEWDRCCQDEMKSRQSVER-----RARASLLDGRHV 100
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVV-----LDLPAKLCISRSVKRIEH 128
+DR N++R+QR ++ L V +VV +D+P ++C R + R H
Sbjct: 101 LIDRTNMDRQQRAIWLSLAADVRQVRSVVTSLIHVDVPPEICYERLLHRQGH 152
>gi|212528384|ref|XP_002144349.1| DNA 3'-phosphatase Tpp1, putative [Talaromyces marneffei ATCC
18224]
gi|210073747|gb|EEA27834.1| DNA 3'-phosphatase Tpp1, putative [Talaromyces marneffei ATCC
18224]
Length = 451
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI G+PG+GKSTF ++ S + R+ QD + T+ +C+ A L G SV
Sbjct: 294 LVIFCGSPGAGKSTFYWKYLKPSG--YERVNQDILK-----TRQKCIKVAKDHLTAGHSV 346
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEG------NLQG 134
+D N E R +V+L ++ + + P LC R + L
Sbjct: 347 AVDNTNANTETRAYWVELAKEFQIPIRCIYFTSPPNLCRHNDAVRASNPSLNPESRTLLP 406
Query: 135 GKAAAVVNRMLQKKELPKLSEGFSRITLCQ 164
G A A +R E P L+EGF IT +
Sbjct: 407 GIAFADFSRRF---EEPTLAEGFEDITRVE 433
>gi|441146945|ref|ZP_20964334.1| putative phosphatase [Streptomyces rimosus subsp. rimosus ATCC
10970]
gi|440620402|gb|ELQ83432.1| putative phosphatase [Streptomyces rimosus subsp. rimosus ATCC
10970]
Length = 865
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 17/162 (10%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV ++GA GSGKSTF + + + C+ D ++ SG L A L
Sbjct: 18 LVALIGATGSGKSTFAARHFKPTEVLSSDFCRGLVSDDENDQSASGDAFDVLHYIAGKRL 77
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D N++RE R VKL E DV A+VLDLP ++C R+ R + +
Sbjct: 78 AAGRRTVVDATNVQREARAQLVKL-AREHDVLPVAIVLDLPEEVCAERNAARAD-----R 131
Query: 134 GGKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAA 172
G V+ R + ++ L L EGF ++ + + V+AA
Sbjct: 132 AGLPLRVIQRHQRELRRSLRHLEREGFRKVHVLKGVEQVEAA 173
>gi|171678243|ref|XP_001904071.1| hypothetical protein [Podospora anserina S mat+]
gi|170937191|emb|CAP61848.1| unnamed protein product [Podospora anserina S mat+]
Length = 452
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 11/151 (7%)
Query: 15 EKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSA 74
EKK ++ +V+ VG PG+GKSTF ++ + R+ QD + +K +C +A+
Sbjct: 288 EKKHEKEMVLFVGPPGAGKSTFFWKELKPLG--YERVNQDLLK-----SKDKCFKTATEW 340
Query: 75 LKKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRS-VKRIEHEGNL 132
LK+G+SV +D N + + R +V L +V + V P LC S V+ + N
Sbjct: 341 LKEGESVVIDNTNADPDTRAQWVDLAKKHKVPIRCVWFKTPLHLCEHNSAVRALNKSLNP 400
Query: 133 QGGK--AAAVVNRMLQKKELPKLSEGFSRIT 161
+ + N + PK EGF IT
Sbjct: 401 EDRQLLPQLAFNGFKSRFREPKDKEGFDDIT 431
>gi|156544275|ref|XP_001606989.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase-like
isoform 1 [Nasonia vitripennis]
Length = 549
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
KQ LVIMVG PGSGKS H ++ + + I +DT+ G +C+ AL +G
Sbjct: 393 KQELVIMVGCPGSGKS----HFAKTHLKNYYYINRDTL-----GNWQKCVAKTDEALAQG 443
Query: 79 KSVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKA 137
KSV +D N ++ R+ +V++ V V + L + ++ RI + Q +
Sbjct: 444 KSVVVDNTNPDKVSRSRYVQVAKKHRVPVRCFAMTLDKEHIKHNNMFRILTDPTHQ-AIS 502
Query: 138 AAVVNRMLQKKELPKLSEGFSRI 160
++N ++ P EGFS I
Sbjct: 503 DMIINSYIKNFTPPSEDEGFSEI 525
>gi|378729493|gb|EHY55952.1| hypothetical protein HMPREF1120_04061 [Exophiala dermatitidis
NIH/UT8656]
Length = 447
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 66/150 (44%), Gaps = 20/150 (13%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q LVI G+PG+GKSTF V++ + R+ QD + T+ +C+ A L G
Sbjct: 282 QELVIFCGSPGAGKSTFYWDVLQPLG--YERVNQDILK-----TRDRCIKKARELLSAGY 334
Query: 80 SVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRI--------EHEG 130
SV +D N + E R+ ++KL V + V P +L R E
Sbjct: 335 SVAIDNTNADPETRSYWIKLAREFNVPIRCVHFTAPTRLAEHNDAVRALNPNTMNPEKRT 394
Query: 131 NLQGGKAAAVVNRMLQKKELPKLSEGFSRI 160
L G A+ + R + P+L EGF I
Sbjct: 395 QLPGIAFASFIKRFQE----PRLDEGFQDI 420
>gi|195499086|ref|XP_002096799.1| GE24852 [Drosophila yakuba]
gi|194182900|gb|EDW96511.1| GE24852 [Drosophila yakuba]
Length = 523
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+VIMVG PGSGKS FC +S R + DT+ G+ CLT+ L G+S
Sbjct: 367 MVIMVGLPGSGKSHFCVGFFQS--RGYKIANADTL-----GSTQNCLTACKRFLDSGQSC 419
Query: 82 FLDRCNLEREQRTDFVKLGG-PEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N++ R F++L ++ +V+++P + ++ E V
Sbjct: 420 VVDNTNVDAASRKKFLQLASDKKIPCRCLVMNVPVAQ-VKHNIAFRELSDTAHSKIKDMV 478
Query: 141 VNRMLQKKELPKLSEGFSRI 160
N M +K + P L EGF I
Sbjct: 479 FNMMKKKYQEPALDEGFISI 498
>gi|389639970|ref|XP_003717618.1| bifunctional polynucleotide phosphatase/kinase [Magnaporthe oryzae
70-15]
gi|351643437|gb|EHA51299.1| bifunctional polynucleotide phosphatase/kinase [Magnaporthe oryzae
70-15]
Length = 517
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 4 DIDDTCKAKDEEKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGT 63
D D KA E+K K I ++ G PG+GKSTF ++ + R+ QDT+ T
Sbjct: 343 DADGEPKALIEQKNEKDI-ILFCGPPGAGKSTFYWKYLKPLG--YGRVNQDTLK-----T 394
Query: 64 KVQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCI-SR 121
K +CL++A+ LK SV +D N + + R +V L ++ + V P L +
Sbjct: 395 KEKCLSAAAEMLKDKVSVVIDNTNPDPDTRALWVALAKKHDIPIRCVWFKTPLALAQHND 454
Query: 122 SVKRIEHEGN--LQGGKAAAVVNRMLQKKELPKLSEGFSRI 160
+V+ + N L+ G A N + + PK+ EGF +
Sbjct: 455 AVRSMNGTMNPELRAGLPALAFNSFNSRLKEPKVGEGFQDV 495
>gi|254390562|ref|ZP_05005777.1| phosphatase [Streptomyces clavuligerus ATCC 27064]
gi|197704264|gb|EDY50076.1| phosphatase [Streptomyces clavuligerus ATCC 27064]
Length = 848
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 21/164 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKSTF + + + C+ D ++ S L A L
Sbjct: 13 LVVLIGASGSGKSTFARRHFKPTEVISSDFCRGLVADDENDQSASRDAFDVLHYIAGKRL 72
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D +++ E R ++L E DV AVVLDLP +C+ R+ +R + +
Sbjct: 73 AAGRLTVVDATHVQAESRRQLIRLAR-EHDVLPIAVVLDLPEDVCVERNARRPD-----R 126
Query: 134 GGKAAAVVNRMLQKKELPKL-----SEGFSRITLCQNENDVQAA 172
G A VV R ++EL + EGF ++ + + + +V AA
Sbjct: 127 AGMPARVVQR--HRRELRRSLRGLEREGFRKVHVLRGQEEVDAA 168
>gi|294815644|ref|ZP_06774287.1| Putative serine/threonine protein phosphatase [Streptomyces
clavuligerus ATCC 27064]
gi|326443993|ref|ZP_08218727.1| putative serine/threonine protein phosphatase [Streptomyces
clavuligerus ATCC 27064]
gi|294328243|gb|EFG09886.1| Putative serine/threonine protein phosphatase [Streptomyces
clavuligerus ATCC 27064]
Length = 860
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 21/164 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKSTF + + + C+ D ++ S L A L
Sbjct: 25 LVVLIGASGSGKSTFARRHFKPTEVISSDFCRGLVADDENDQSASRDAFDVLHYIAGKRL 84
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D +++ E R ++L E DV AVVLDLP +C+ R+ +R + +
Sbjct: 85 AAGRLTVVDATHVQAESRRQLIRLAR-EHDVLPIAVVLDLPEDVCVERNARRPD-----R 138
Query: 134 GGKAAAVVNRMLQKKELPKL-----SEGFSRITLCQNENDVQAA 172
G A VV R ++EL + EGF ++ + + + +V AA
Sbjct: 139 AGMPARVVQR--HRRELRRSLRGLEREGFRKVHVLRGQEEVDAA 180
>gi|327357559|gb|EGE86416.1| hypothetical protein BDDG_09361 [Ajellomyces dermatitidis ATCC
18188]
Length = 504
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 72/172 (41%), Gaps = 24/172 (13%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI G+PGSGKSTF + + R+ QDT+ ++ +CL A L+ GKSV
Sbjct: 345 LVIFCGSPGSGKSTFYWKYLEPLG--YERVNQDTLK-----SRPKCLKVAKEYLQAGKSV 397
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRI----------EHEG 130
+D N E R + +L V + + L P ++C R E
Sbjct: 398 AVDNTNAGTETRAFWTELAKEVNVPIRCIYLSTPPQICKHNDAVRAANPKIESLNPESRS 457
Query: 131 NLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPL 182
+L G A R Q+ P LSEGF IT E Q DT P+
Sbjct: 458 SLP-GIAFGDFQRRFQE---PTLSEGFQDIT--HVEFKFQGTPDTKEVWEPI 503
>gi|225560572|gb|EEH08853.1| polynucleotide kinase [Ajellomyces capsulatus G186AR]
Length = 476
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 14/147 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI G+PGSGKSTF + + R+ QD + ++ +CL A L+ GKSV
Sbjct: 316 LVIFCGSPGSGKSTFYWRYLEPLG--YERVNQDILK-----SRPKCLKVAKEYLQAGKSV 368
Query: 82 FLDRCNLEREQRTDFVKLGG-PEVDVHAVVLDLPAKLCISRSVKRIEHEG------NLQG 134
+D N E R ++ L V + + L P ++C R + G +
Sbjct: 369 AVDNTNAGPETRAYWIDLAKETNVPIRCIYLSTPPQICKHNDTVRAANPGIESINPESRS 428
Query: 135 GKAAAVVNRMLQKKELPKLSEGFSRIT 161
++ ++P LSEGF IT
Sbjct: 429 SLPGIAFGDFQRRFQVPMLSEGFQDIT 455
>gi|261206344|ref|XP_002627909.1| polynucleotide kinase [Ajellomyces dermatitidis SLH14081]
gi|239592968|gb|EEQ75549.1| polynucleotide kinase [Ajellomyces dermatitidis SLH14081]
Length = 504
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 72/172 (41%), Gaps = 24/172 (13%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI G+PGSGKSTF + + R+ QDT+ ++ +CL A L+ GKSV
Sbjct: 345 LVIFCGSPGSGKSTFYWKYLEPLG--YERVNQDTLK-----SRPKCLKVAKEYLQAGKSV 397
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRI----------EHEG 130
+D N E R + +L V + + L P ++C R E
Sbjct: 398 AVDNTNAGTETRAFWTELAKEVNVPIRCIYLSTPPQICKHNDAVRAANPKIESLNPESRS 457
Query: 131 NLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPL 182
+L G A R Q+ P LSEGF IT E Q DT P+
Sbjct: 458 SLP-GIAFGDFQRRFQE---PTLSEGFQDIT--HVEFKFQGTPDTKEVWEPI 503
>gi|156360649|ref|XP_001625139.1| predicted protein [Nematostella vectensis]
gi|156211956|gb|EDO33039.1| predicted protein [Nematostella vectensis]
Length = 340
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
L++MVG+PGSGK+TF + + + + RI +DT+ GT +C+++ +AL +GK V
Sbjct: 222 LIVMVGSPGSGKTTFAKEYL--VPKGYTRINRDTL-----GTWQKCVSACRAALSQGKHV 274
Query: 82 FLDRCNLEREQRTDFVKLGG-PEVDVHAVVLDL 113
+D N ++E R +++ +V V V+D+
Sbjct: 275 VVDNTNPDQESRKRYIECAKHAKVPVRCFVMDI 307
>gi|452842851|gb|EME44787.1| hypothetical protein DOTSEDRAFT_72286 [Dothistroma septosporum
NZE10]
Length = 445
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 14/146 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI G+PG+GKS+F M + R+ QD + T+ C+ A+ ++ K+V
Sbjct: 286 LVIFCGSPGAGKSSFFWRHMEPLG--YERVNQDILK-----TRETCIKVATQLVEDQKAV 338
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N + E R+ +V L +V + V PAKLC R +G L + +
Sbjct: 339 AVDNTNADFETRSAWVGLAAKLKVPIRLVHFTAPAKLCEHNDTVRALSDG-LMNPEKRTM 397
Query: 141 VNRM-----LQKKELPKLSEGFSRIT 161
+ RM + PKL EGF +T
Sbjct: 398 LPRMAFTGFASRYREPKLEEGFEDVT 423
>gi|449018020|dbj|BAM81422.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 359
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG--K 79
+V++ G PGSGKSTF + V++ W R+ QD + G++ +C AL +
Sbjct: 201 VVLLCGIPGSGKSTFAKLVLKHGGENWVRVSQDDL-----GSRQECERMMQEALTSDPPR 255
Query: 80 SVFLDRCNLEREQRTDFVKLGGP--EVDVHAVVLDLPAKLCISRSVKRIEHEGNL---QG 134
V +DRCN++ QR ++ + V +V +P CI R + R + L
Sbjct: 256 HVIVDRCNVDSAQRAVWIAIAAQANAYPVGVLVFPVPLDECIRRVLLRGPNHPTLFESTE 315
Query: 135 GKAAAVVNRMLQKKELPKLSE--GFSRI 160
VV K E P E GF RI
Sbjct: 316 NDVVKVVTSFAGKWENPSPGEGIGFCRI 343
>gi|239610854|gb|EEQ87841.1| polynucleotide kinase [Ajellomyces dermatitidis ER-3]
Length = 504
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 72/172 (41%), Gaps = 24/172 (13%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI G+PGSGKSTF + + R+ QDT+ ++ +CL A L+ GKSV
Sbjct: 345 LVIFCGSPGSGKSTFYWKYLEPLG--YERVNQDTLK-----SRPKCLKVAKEYLQAGKSV 397
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRI----------EHEG 130
+D N E R + +L V + + L P ++C R E
Sbjct: 398 AVDNTNAGTETRAFWTELAKEVNVPIRCIYLSTPPQICKHNDAVRAANPKIESLNPESRS 457
Query: 131 NLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPL 182
+L G A R Q+ P LSEGF IT E Q DT P+
Sbjct: 458 SLP-GIAFGDFQRRFQE---PTLSEGFQDIT--HVEFKFQGTPDTKEVWEPI 503
>gi|322435861|ref|YP_004218073.1| polynucleotide kinase domain-containing protein [Granulicella
tundricola MP5ACTX9]
gi|321163588|gb|ADW69293.1| polynucleotide kinase domain protein [Granulicella tundricola
MP5ACTX9]
Length = 317
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 30/187 (16%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWAR------ICQDTINKGKSGTKVQCLTSASSA- 74
+V+ +G PGSGK+T+ + R P + + D ++ G L S A
Sbjct: 138 VVLTIGLPGSGKTTWYK---RRGVSPLSSDMLRTILFDDITDQRYQGLVFSTLRSLLRAR 194
Query: 75 -LKKGKSVFLDRCNLEREQRTDFVKLG---GPEVDVHAVVLDLPAKLCISRSVKRIEHEG 130
+ K ++D NL +R ++K+ G +V AV D+P +C+ R+ KR
Sbjct: 195 LIAKMPWNYVDATNLSPHERRQWIKMAKSFG--YEVQAVFFDVPLAVCMERNSKRDRQVT 252
Query: 131 NLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTLPHGSF 190
+ V+ +M ++ P EGF +IT+ + + +A DT TLP +
Sbjct: 253 D-------EVMQKMAERLRPPVFKEGFDKITVVRVKGAPEAPSDT-------PTLPQPTP 298
Query: 191 GQKNPDA 197
+ NPDA
Sbjct: 299 EEPNPDA 305
>gi|367049025|ref|XP_003654892.1| hypothetical protein THITE_2118108 [Thielavia terrestris NRRL 8126]
gi|347002155|gb|AEO68556.1| hypothetical protein THITE_2118108 [Thielavia terrestris NRRL 8126]
Length = 467
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF ++ + R+ QD + +K +C +A+ L G SV
Sbjct: 310 IVLFVGPPGAGKSTFYWKYLKPLG--YERVNQDILK-----SKDKCFKAAADLLHAGDSV 362
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLC----ISRSVKRIEHEGNLQGGK 136
+D N + E R+ +V L +V + + P +LC RS+ + + + QG
Sbjct: 363 VVDNTNADTETRSQWVALAHKHKVPIRCLWFKTPLQLCEHNAAVRSMNKQLNPESRQGLP 422
Query: 137 AAAVVNRMLQKKELPKLSEGFSRI 160
A + KE P++ EGF I
Sbjct: 423 KLAFTGFASRFKE-PRIEEGFQDI 445
>gi|256377582|ref|YP_003101242.1| metallophosphoesterase [Actinosynnema mirum DSM 43827]
gi|255921885|gb|ACU37396.1| metallophosphoesterase [Actinosynnema mirum DSM 43827]
Length = 834
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 22/181 (12%)
Query: 22 LVIMVGAPGSGKSTFC-EHVMR----SSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV++VGA GSGKSTF +H R SS + D ++ SG L A L
Sbjct: 10 LVVLVGASGSGKSTFALQHFTRTQVLSSDFFRGMVADDENDQSASGAAFDSLYYVAGKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G++ +D N++ R + + E DV A+VLD P +C++R+ R + +
Sbjct: 70 AAGRTTVVDATNVQPADRARLIAV-AKEHDVLPVAIVLDTPDAVCLARNATRPDRD---- 124
Query: 134 GGKAAAVVNRMLQKKELPKLS-EGFSRITLCQNENDVQAAL--------DTYSGLGPLDT 184
G R +K L +L EGF R+ + + + DV A+ D GP D
Sbjct: 125 FGDHVVRRQRTALRKSLNRLGREGFRRVHVLRTQRDVDEAVIVPERLLNDLRHERGPFDV 184
Query: 185 L 185
+
Sbjct: 185 I 185
>gi|371945068|gb|AEX62889.1| putative bifunctional polynucleotide phosphatase kinase
[Moumouvirus Monve]
Length = 398
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
K+ ++I++G PGSGKS F + + IN+ TK++C+ AL +
Sbjct: 234 KKEMIILIGPPGSGKSYFATKYILPHNYVY-------INRDTCKTKIKCINETKKALSEN 286
Query: 79 KSVFLDRCN---LEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGG 135
KSV +D N L R + T K G + ++ A++++ KL + + + H GG
Sbjct: 287 KSVVIDNTNPDVLSRMEYTSLAKDYGYK-NIRAIIINTDEKLY--KHLNNVRHI--YSGG 341
Query: 136 ---KAAAVVNRMLQKKEL-PKLSEGFSRI 160
K + + R+ Q K + P+ SEGF I
Sbjct: 342 VIPKVSEIGYRIYQNKYISPQKSEGFDII 370
>gi|441432273|ref|YP_007354315.1| Polynucleotide phosphatase/kinase [Acanthamoeba polyphaga
moumouvirus]
gi|440383353|gb|AGC01879.1| Polynucleotide phosphatase/kinase [Acanthamoeba polyphaga
moumouvirus]
Length = 398
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
K+ ++I++G PGSGKS F + + IN+ TK++C+ AL +
Sbjct: 234 KKEMIILIGPPGSGKSYFATKYILPHNYVY-------INRDTCKTKIKCINETKKALSEN 286
Query: 79 KSVFLDRCN---LEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGG 135
KSV +D N L R + T K G + ++ A++++ KL + + + H GG
Sbjct: 287 KSVVIDNTNPDVLSRMEYTSLAKDYGYK-NIRAIIINTDEKLY--KHLNNVRHI--YSGG 341
Query: 136 ---KAAAVVNRMLQKKEL-PKLSEGFSRI 160
K + + R+ Q K + P+ SEGF I
Sbjct: 342 VIPKVSEIGYRIYQNKYISPQKSEGFDII 370
>gi|228474109|ref|ZP_04058850.1| polynucleotide kinase [Capnocytophaga gingivalis ATCC 33624]
gi|228274623|gb|EEK13464.1| polynucleotide kinase [Capnocytophaga gingivalis ATCC 33624]
Length = 312
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 12/122 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSG---------TKVQCLTSAS 72
L+I+VGAPGSGKSTF + +R+ W R+ +D + G ++ + AS
Sbjct: 13 LLILVGAPGSGKSTFARYFIRTEDN-WVRVNRDDFRLMQFGDSLMSPFYEERITKMVEAS 71
Query: 73 --SALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEG 130
+ LK +V +D N D V D+ V DLP + + R KR E G
Sbjct: 72 VIALLKNRTNVIIDATNSSLRSLQDMVHTYTEYADISFKVFDLPVEELVKRCDKRCEQTG 131
Query: 131 NL 132
Sbjct: 132 KF 133
>gi|429852381|gb|ELA27520.1| DNA kinase phosphatase pnk1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 460
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Query: 15 EKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSA 74
EKK KQ +VI G PG+GKSTF + ++ + RI QD + T+ +C+ +A
Sbjct: 296 EKKNKQDIVICCGPPGAGKSTFFWNHLKPLG--YERINQDILK-----TRDKCVQAAKEF 348
Query: 75 LKKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKR-----IEH 128
L G+SV +D N + + R +V+L +V + V L P +C R +
Sbjct: 349 LSAGQSVAIDNTNADPDTRAVWVQLAEKQQVPIRCVWLKTPLNVCEHNDAVRSMNASLNP 408
Query: 129 EGNLQGGKAAAVVNRMLQKKELPKLSEGFSRIT 161
E + K A N + + PK EGF IT
Sbjct: 409 ESRVALPKMA--FNGFKSRFKEPKQKEGFQDIT 439
>gi|213962538|ref|ZP_03390800.1| polynucleotide kinase [Capnocytophaga sputigena Capno]
gi|213954864|gb|EEB66184.1| polynucleotide kinase [Capnocytophaga sputigena Capno]
Length = 303
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 12/122 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSG---------TKVQCLTSAS 72
L+I+VGAPGSGKSTF + +R+ W R+ +D + G ++ + AS
Sbjct: 4 LLILVGAPGSGKSTFARYFLRTEDN-WIRVNRDDFRLMQFGDSLMIPFYEERISKMVEAS 62
Query: 73 --SALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEG 130
+ LK +V +D N D + D+ V DLP + R KR E G
Sbjct: 63 VLTLLKSDTNVIIDATNTSLRTIQDMIHTYTEYADISFKVFDLPVDELVKRCDKRYEETG 122
Query: 131 NL 132
Sbjct: 123 KF 124
>gi|350287698|gb|EGZ68934.1| PNK3P-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 483
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 15/148 (10%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q L++ VG PG+GKSTF ++ + R+ QD + +K +CL +A+ LK+G
Sbjct: 324 QELILFVGPPGAGKSTFYWRHLKPLG--FERVNQDVLK-----SKDKCLKAATEYLKEGD 376
Query: 80 SVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKR-----IEHEGNLQ 133
SV +D N + + R +V+L + V V V P +C R + E
Sbjct: 377 SVVVDNTNPDPDTRKQWVELAKKQGVPVRCVWFRTPLVVCEHNDAVRALNKPLNPESRTS 436
Query: 134 GGKAAAVVNRMLQKKELPKLSEGFSRIT 161
K A N + + PK+ EGF +T
Sbjct: 437 LPKLA--FNSFNARFKEPKVKEGFQDVT 462
>gi|60599478|gb|AAX26284.1| unknown [Schistosoma japonicum]
Length = 188
Score = 55.5 bits (132), Expect = 9e-05, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 23/150 (15%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
K L++MVG P SGKS FC V+ + + I++ GT +C+ + A K
Sbjct: 30 KPELILMVGYPASGKSHFCNQVL-------IPLGYEVISRDNIGTWQKCVQAVEQATSKS 82
Query: 79 KSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSV-------KRIEHEGN 131
V +D N++ E R ++K+ A V D+P + I + +R N
Sbjct: 83 LPVVVDNTNMDVESRARYIKI--------AKVWDIPVRCFIMETTIEHAQHNERFRSLTN 134
Query: 132 LQGGKAAAVV-NRMLQKKELPKLSEGFSRI 160
L + +V N M K E P + EG+ I
Sbjct: 135 LSHKPISQMVFNMMKSKYEKPTIEEGYQEI 164
>gi|148273562|ref|YP_001223123.1| putative phosphatase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831492|emb|CAN02453.1| putative phosphatase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 861
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 32/186 (17%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTI---------NKGKSGTKVQCLTS-A 71
LV++VGA GSGKSTF R+ P+ + D ++ + + L A
Sbjct: 17 LVLLVGASGSGKSTFA----RTHFGPYEVLSSDVFRGLVSNDENDQSATSAAFEALRHVA 72
Query: 72 SSALKKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEG 130
+ L++G +D N++ E R V+L +V A+VLD+P +C+ R+ R +
Sbjct: 73 AHRLRRGLMTVIDATNVQPESRRSLVQLARDHDVLPVAIVLDVPVGVCVERNAARTDRT- 131
Query: 131 NLQGGKAAAVVNR---MLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGL-------- 179
A+VV R LQ+ EGF R+ + + +++ AA T + L
Sbjct: 132 -----FGASVVKRQHDQLQRSLKGLGREGFRRVHVLRGVDEIAAARFTVAPLLNDLRHER 186
Query: 180 GPLDTL 185
GP D +
Sbjct: 187 GPFDAI 192
>gi|429752025|ref|ZP_19284912.1| hypothetical protein HMPREF9073_00871 [Capnocytophaga sp. oral
taxon 326 str. F0382]
gi|429178209|gb|EKY19492.1| hypothetical protein HMPREF9073_00871 [Capnocytophaga sp. oral
taxon 326 str. F0382]
Length = 303
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 12/122 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSG---------TKVQCLTSAS 72
L+I+VGAPGSGKSTF + +R+ W R+ +D + G ++ + AS
Sbjct: 4 LLILVGAPGSGKSTFARYFLRTEDN-WIRVNRDDFRLMQFGDSLMIPFYEERISKMVEAS 62
Query: 73 --SALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEG 130
+ LK +V +D N D + D+ V DLP + R KR E G
Sbjct: 63 VLTLLKSDTNVIIDATNTSLRTIEDMIHTYTEYADISFKVFDLPVDELVKRCDKRYEETG 122
Query: 131 NL 132
Sbjct: 123 KF 124
>gi|313244286|emb|CBY15105.1| unnamed protein product [Oikopleura dioica]
Length = 504
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 74/171 (43%), Gaps = 20/171 (11%)
Query: 17 KWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALK 76
K K+ L+I G PG GKSTF + + RS A +C+D I G+ +C+ AL
Sbjct: 345 KRKKSLIIFTGYPGCGKSTFAKTLTRSFPEV-AILCRDEI-----GSTQKCIKLCKEALH 398
Query: 77 KGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGK 136
GKSV +D N + R ++++ H + LD L + H +
Sbjct: 399 IGKSVVVDATNPDIASRQKYLEIA------HELDLDSIISLFFDVEIDLAMHNCRYRAIT 452
Query: 137 AAAVVNRML-----QKKELPKLSEGFSRITLCQNENDVQAALDT---YSGL 179
AV+ M+ +K E P SEGF+ E ++ +T YS L
Sbjct: 453 GGAVIKDMILYSHRKKFEAPSRSEGFTDTISIPFEPKFESNFETQLYYSHL 503
>gi|331228202|ref|XP_003326768.1| hypothetical protein PGTG_08305 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309305758|gb|EFP82349.1| hypothetical protein PGTG_08305 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 276
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
++I+ G GSGKSTF + +++ + RICQD + K ++ C + A LK+GKS+
Sbjct: 15 ILILSGWVGSGKSTFATQLEQANPN-FVRICQDVLGKRQA-----CESRARRCLKEGKSI 68
Query: 82 FLDRCNLEREQRTDFVKLG 100
+DR N +R+QR ++++
Sbjct: 69 IIDRQNFDRKQRLTWLRIA 87
>gi|295835990|ref|ZP_06822923.1| protein serine-threonine phosphatase [Streptomyces sp. SPB74]
gi|197699360|gb|EDY46293.1| protein serine-threonine phosphatase [Streptomyces sp. SPB74]
Length = 883
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 25/166 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV++VGA GSGKSTF + + + C+ D ++G SG L A L
Sbjct: 46 LVVLVGATGSGKSTFAARHFKPTEVLSSDFCRGLVADDENDQGASGDAFDVLRYIAGKRL 105
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D +++RE R V L E DV A+VLD+P +C R+ +R + G
Sbjct: 106 AAGRLTVVDATSVQRESRKQLVDL-AREYDVLPVAIVLDVPEDVCARRNAERADRAG--- 161
Query: 134 GGKAAAVVNRMLQK--KELPKL-----SEGFSRITLCQNENDVQAA 172
+ R++Q+ +EL + EGF + + + +++AA
Sbjct: 162 ------IPRRVIQRHQRELRRSLRGLEREGFRKAHVLRGVAEIEAA 201
>gi|159487727|ref|XP_001701874.1| predicted protein [Chlamydomonas reinhardtii]
gi|158281093|gb|EDP06849.1| predicted protein [Chlamydomonas reinhardtii]
Length = 249
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 48 WARICQDTINKGKSGTKVQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLG-----GP 102
W + QD + G++ C AL++G +V +DRCN + +QR+ +V+L GP
Sbjct: 14 WRHVSQDEL-----GSRRACEEECVRALRQGWNVVVDRCNFDEQQRSHWVQLARSCRSGP 68
Query: 103 EVDVHAVVLDLPAKLCISRSVKRIEH 128
+ + AV L LP LC R+ R EH
Sbjct: 69 AMQLVAVQLLLPLDLCRERARGRTEH 94
>gi|288916113|ref|ZP_06410494.1| metallophosphoesterase [Frankia sp. EUN1f]
gi|288352509|gb|EFC86705.1| metallophosphoesterase [Frankia sp. EUN1f]
Length = 974
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV++VG GSGKSTF + + C+ D ++ + L A+ L
Sbjct: 60 LVVLVGVTGSGKSTFARRHFLPTQVLSSDFCRGLVADDENDQSATADAFDVLNFIAARRL 119
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
G+ +D N++R R V+L +V A+VLD+P +C++R+ R +
Sbjct: 120 TAGRLTVVDATNVQRTSRARLVELARAHDVLPVAIVLDVPESVCVARNADRPDR------ 173
Query: 135 GKAAAVVNRMLQKKELPK-----LSEGFSRITLCQNENDVQAALDTYSGL--------GP 181
A VV R Q EL + EGF R+ + ++E ++ AA Y+ L GP
Sbjct: 174 AFGAHVVRR--QHGELRRSLRGLAREGFRRVHVLRSEAEIAAATIQYTPLLNDRRELTGP 231
Query: 182 LDTL 185
D +
Sbjct: 232 FDVI 235
>gi|391344348|ref|XP_003746463.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase-like
[Metaseiulus occidentalis]
Length = 522
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
++++VG P SGKST + + S + + +I QDT+ G+ +C+ A AL KSV
Sbjct: 364 MLVLVGYPASGKSTLAQII--SEKKGYIQINQDTL-----GSLDRCVRKAGEALSNKKSV 416
Query: 82 FLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N EQR ++++ +V + LD + R+ + + V
Sbjct: 417 IIDNTNFLEEQRRRYIEIARRAGANVRCLWLDCSVDQARHNNKFRLLTSPDAKHKDVTDV 476
Query: 141 VNRMLQKK-ELPKLSEGFSRIT 161
V L+KK E PKL EGF +I
Sbjct: 477 VLYTLRKKFEEPKLGEGFLQIV 498
>gi|270009738|gb|EFA06186.1| hypothetical protein TcasGA2_TC009034 [Tribolium castaneum]
Length = 507
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 9/144 (6%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
KQ ++IMVG PGSGKS FC++ + A+ + + +D K G+ +C L+K
Sbjct: 348 KQEVIIMVGTPGSGKSYFCKNFL--VAKGYVHVSRD-----KLGSWQKCAKMLEDCLQKK 400
Query: 79 KSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKA 137
+SV +D N ++E R F+ + +VD ++ K + R E
Sbjct: 401 QSVVIDNTNPDKESRQRFIDVAKRNQVDCRCFLMTTSHKQAKHNNRFR-EMTDKSHTPVG 459
Query: 138 AAVVNRMLQKKELPKLSEGFSRIT 161
V+N + + P+++EGFS I
Sbjct: 460 DLVLNSYKKGFQEPEMAEGFSEIV 483
>gi|91086707|ref|XP_970260.1| PREDICTED: similar to polynucleotide kinase- 3-phosphatase
[Tribolium castaneum]
Length = 522
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 9/144 (6%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
KQ ++IMVG PGSGKS FC++ + A+ + + +D K G+ +C L+K
Sbjct: 363 KQEVIIMVGTPGSGKSYFCKNFL--VAKGYVHVSRD-----KLGSWQKCAKMLEDCLQKK 415
Query: 79 KSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKA 137
+SV +D N ++E R F+ + +VD ++ K + R E
Sbjct: 416 QSVVIDNTNPDKESRQRFIDVAKRNQVDCRCFLMTTSHKQAKHNNRFR-EMTDKSHTPVG 474
Query: 138 AAVVNRMLQKKELPKLSEGFSRIT 161
V+N + + P+++EGFS I
Sbjct: 475 DLVLNSYKKGFQEPEMAEGFSEIV 498
>gi|21064371|gb|AAM29415.1| RE13646p [Drosophila melanogaster]
Length = 523
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+VIMVG PGSGKS FC + R + + DT+ G+ CLT+ L G+S
Sbjct: 367 MVIMVGLPGSGKSHFCSSFFQ--PRGYKIVNADTL-----GSTQNCLTACKRFLDSGQSC 419
Query: 82 FLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N++ R ++L + + +V+++P + ++ E + + V
Sbjct: 420 VVDNTNVDAASRKKLLQLASEKMIPCRCLVMNVPVAQ-VKHNIAFRELSDSARTKIKDMV 478
Query: 141 VNRMLQKKELPKLSEGFSRI 160
N M +K + P L EGF I
Sbjct: 479 FNMMKKKYQEPALDEGFISI 498
>gi|345002616|ref|YP_004805470.1| metallophosphoesterase [Streptomyces sp. SirexAA-E]
gi|344318242|gb|AEN12930.1| metallophosphoesterase [Streptomyces sp. SirexAA-E]
Length = 863
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 21/164 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKSTF + + + C+ D ++ S L A L
Sbjct: 21 LVVLIGATGSGKSTFARAHFKPTEVISSDFCRGLVADDENDQSASKDAFDVLHHIAGKRL 80
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D N++ E R V+L E DV A+VLD+P ++C++R+ +R + +
Sbjct: 81 AAGRLTVVDATNVQSESRKQLVRL-AREHDVLPIAIVLDVPEEVCLARNAQRPD-----R 134
Query: 134 GGKAAAVVNRMLQKKELPKL-----SEGFSRITLCQNENDVQAA 172
G VV R + EL + EGF ++ + + E +V AA
Sbjct: 135 AGMPRHVVRR--HRSELHRSLRGLEREGFRKVHVLRGEEEVAAA 176
>gi|453080281|gb|EMF08332.1| DNA kinase/phosphatase Pnk1 [Mycosphaerella populorum SO2202]
Length = 444
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 12/145 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ G+PG+GKSTF H M+S + R+ QDT+ T+ +C+ A+ L+ V
Sbjct: 286 VVLFCGSPGAGKSTFYWHHMQSLG--YERVNQDTLK-----TRARCIKVATQLLEDKTPV 338
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N + E R +++L +V + V PAKLC R +G + + +
Sbjct: 339 VVDNTNADVETRAAWLQLAERLKVPIRLVHFTAPAKLCEHNDTVRSLSDGIMNPERRTRL 398
Query: 141 ----VNRMLQKKELPKLSEGFSRIT 161
+ + P L EGF IT
Sbjct: 399 PIMAFTGYAGRFQEPVLDEGFLDIT 423
>gi|258576445|ref|XP_002542404.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902670|gb|EEP77071.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 419
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 20/151 (13%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q LVI +PG+G+STF ++ + R+ QD + T+ +CL A LK GK
Sbjct: 257 QELVIFCASPGAGESTFYWRYLQPLE--YERVNQDVLK-----TRSKCLKVADEYLKGGK 309
Query: 80 SVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLC-----ISRSVKRIE----HE 129
SV +D N + E R +++L V + + L P +C + + +IE
Sbjct: 310 SVAVDNTNADPETRAHWIELAKKYNVPIRCIRLSTPQSICKHNNAVRAANPKIESLNPEN 369
Query: 130 GNLQGGKAAAVVNRMLQKKELPKLSEGFSRI 160
L G A R Q+ P++SEGF I
Sbjct: 370 RTLLPGIAFGDFTRRFQE---PQISEGFKDI 397
>gi|443894703|dbj|GAC72050.1| polynucleotide kinase 3' phosphatase [Pseudozyma antarctica T-34]
Length = 488
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 30/172 (17%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VGAP SGK+ + V + + + QD + T+ +CL + + G+S
Sbjct: 328 IVLFVGAPASGKTFLFQRVFAPAH--YVHVNQDALR-----TRDKCLRVVADTIAAGQSC 380
Query: 82 FLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAA-- 138
+D N +R R +++L V + V D+P +C+ + R H G AA
Sbjct: 381 VVDNTNRDRATRKHYIELARQTGVRIRCVYFDVPKHVCVHNNHFRAHH------GPAADH 434
Query: 139 ---------AVVNRMLQKKELPKLSEGFS----RITL-CQNENDVQAALDTY 176
++ ++ + P SEGF RIT ++DVQ + Y
Sbjct: 435 ESKREILPFTAIDSWFKQVQPPSRSEGFDADVLRITWRFHGKDDVQTKYNLY 486
>gi|94969565|ref|YP_591613.1| kinase-like protein [Candidatus Koribacter versatilis Ellin345]
gi|94551615|gb|ABF41539.1| kinase-like protein [Candidatus Koribacter versatilis Ellin345]
Length = 335
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 19 KQILVIMVGAPGSGKST-FCEH--VMRSSARPWARICQDTINKGKSGTKVQCLTSASSAL 75
K +V+ +G PGSGKST F H + SS + D + L S A
Sbjct: 158 KGAVVLAIGLPGSGKSTWFKRHNIIPLSSDLMRTLLFDDVTEQRFQDLVFSTLRSLLRAR 217
Query: 76 KKGKSVF--LDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNL 132
K + +D NL ++R ++KL + AV D+P ++CI R+ KR + +
Sbjct: 218 MIAKRPWNHVDATNLSPKERRSWIKLAHDFGYEAQAVFFDVPTEVCIERNRKRGRNVPD- 276
Query: 133 QGGKAAAVVNRMLQKKELPKLSEGFSRITLCQ------NENDVQAALD 174
+++RM QK PK EGF++IT+ + + N V+ +D
Sbjct: 277 ------EIIHRMAQKLRPPKFEEGFTKITIVKLKKSATDSNPVEVPVD 318
>gi|340502793|gb|EGR29444.1| sap DNA-binding domain protein [Ichthyophthirius multifiliis]
Length = 820
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 18/148 (12%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
KQ ++I++G+ GSGKSTF + ++ R IN+ + T +CL A +A+K
Sbjct: 661 KQEMIILIGSAGSGKSTFVYNHLQDYQR---------INRDELKTMPKCLQVAENAIKNK 711
Query: 79 KSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKA 137
K++ +D N E R DFV L + + A VL + L + +R E N +
Sbjct: 712 KNIVIDNTNPTSEARKDFVSLAKKYNIHLRAFVLSVDKDLAMHLDNQR---ETNKERKHF 768
Query: 138 AAVVNRM-----LQKKELPKLSEGFSRI 160
+ V R+ + + P +EGF I
Sbjct: 769 SKRVGRIPIHTFFKNFQEPTKNEGFDEI 796
>gi|433604217|ref|YP_007036586.1| Metallophosphoesterase [Saccharothrix espanaensis DSM 44229]
gi|407882070|emb|CCH29713.1| Metallophosphoesterase [Saccharothrix espanaensis DSM 44229]
Length = 828
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 32/201 (15%)
Query: 1 MDTDIDDTCKAKDEEKKWKQILVIMVGAPGSGKSTFCEHVMRSS---ARPWAR--ICQDT 55
M+ I D C LV++VGA GSGKSTF + + + + R + D
Sbjct: 1 MELKIPDLC------------LVVLVGASGSGKSTFARKHFKPTQVLSGDYFRGLVADDE 48
Query: 56 INKGKSGTKVQCLTS-ASSALKKGKSVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDL 113
++ SG L A L+ G++ +D N++R R V+L V +VLD+
Sbjct: 49 NDQSASGAAFDVLHYVAGKRLEAGRTTVVDATNVQRADRAHLVELAREHNVLPVVIVLDV 108
Query: 114 PAKLCISRSVKRIEHEGNLQGGKAAAVVNRMLQKKELPKLS-EGFSRITLCQNENDVQAA 172
P ++C++R+ R + + G +R +K + L+ EGF ++ + + +++V +A
Sbjct: 109 PEEVCLARNAARPDRD----FGPHVVRRHRTALRKSVKFLAKEGFRKVHVLRGQSEVDSA 164
Query: 173 L--------DTYSGLGPLDTL 185
+ D GP D +
Sbjct: 165 VIVPERLLNDLRHETGPFDVI 185
>gi|195055739|ref|XP_001994770.1| GH17419 [Drosophila grimshawi]
gi|193892533|gb|EDV91399.1| GH17419 [Drosophila grimshawi]
Length = 524
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
++I+VG PGSGKS FC V+ S + A DT+ G+ CL + AL +S
Sbjct: 368 MIIVVGLPGSGKSHFCAEVLDSKSYKIAN--ADTL-----GSTQACLNACKQALIANQSC 420
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAA--- 138
+D N++ R FV L V++ L + +S++ I + L +
Sbjct: 421 VVDNTNVDAASRKKFVALA---VEMKVPCRCLVMNVTVSQAKHNIAYRELLDTDHSKIND 477
Query: 139 AVVNRMLQKKELPKLSEGFSRI 160
V N M +K + P L EGF I
Sbjct: 478 MVFNMMKKKYQAPTLEEGFVTI 499
>gi|298242755|ref|ZP_06966562.1| conserved hypothetical protein [Ktedonobacter racemifer DSM 44963]
gi|297555809|gb|EFH89673.1| conserved hypothetical protein [Ktedonobacter racemifer DSM 44963]
Length = 157
Score = 54.3 bits (129), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
L++++G GSGKSTF SS A + +D + + + Q L AL++G+ V
Sbjct: 3 LLLLIGLQGSGKSTFYRTRFASSH---AYVSKDLLRNNRHPARRQ-LQQVEDALRQGQLV 58
Query: 82 FLDRCNLEREQRTDFVKLG---GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAA 138
+D N R +R++ ++LG G V + +DL C +R+ +R EG + + A
Sbjct: 59 VVDNTNASRAERSELIELGKRLGARVIGYYFEVDLAR--CRARNAQR---EGLRRVPEVA 113
Query: 139 AVVNRMLQKKELPKLSEGFSRITLCQNEN----DVQAALDTYSGLG 180
L++ E P SEGF + +N + DV T SG G
Sbjct: 114 IFAT--LKRLERPDYSEGFDELFFVRNNDQEGFDVSPWQSTLSGEG 157
>gi|407642935|ref|YP_006806694.1| metallophosphoesterase [Nocardia brasiliensis ATCC 700358]
gi|407305819|gb|AFT99719.1| metallophosphoesterase [Nocardia brasiliensis ATCC 700358]
Length = 864
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 29/193 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTI----NKGKSGTKVQCLTS--ASSAL 75
LV+++G+ GSGKSTF RS+A + C+ + N + + L A L
Sbjct: 11 LVVLIGSTGSGKSTFARKHFRSTAIVSSDACRGVVSDDENDQSATAEAFALLHHIAGVRL 70
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
++G +D N++ + R + + + +V A+VLD+P +C+ R+ R + +
Sbjct: 71 RRGLRTVVDATNVQAKSRQELIAVARAHDVLPVAIVLDVPDSVCLQRNSTRPD-----RA 125
Query: 135 GKAAAVVNRMLQKKELPKL-----SEGFSRITLCQNENDVQAAL--------DTYSGLGP 181
G A VV R Q++EL + EGF ++ + + +++AA D GP
Sbjct: 126 GLGAHVVVR--QQRELRRSLRSLEREGFRKVYVLRGAAEIEAATIVDEKSWNDKRELTGP 183
Query: 182 LDTLP--HGSFGQ 192
D + HG G+
Sbjct: 184 FDVIGDVHGCRGE 196
>gi|256394650|ref|YP_003116214.1| metallophosphoesterase [Catenulispora acidiphila DSM 44928]
gi|256360876|gb|ACU74373.1| metallophosphoesterase [Catenulispora acidiphila DSM 44928]
Length = 870
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 21/168 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ----DTINKGKSGTKVQCLTS--ASSAL 75
LV+++G+ GSGKSTF R +A + C+ D N + + L A L
Sbjct: 25 LVVLIGSSGSGKSTFARKHFRPTAIVSSDACRGIVSDDENDQSATPEAFALLHHIAGVRL 84
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
++G +D N++ + R VKL E DV A+VLD+P ++C+ R+ +R + +
Sbjct: 85 RRGLLTVVDATNVQTKAREALVKLAR-EHDVLPIAIVLDIPERVCVDRNAERAD-----R 138
Query: 134 GGKAAAVVNRMLQKKELPK-----LSEGFSRITLCQNENDVQAALDTY 176
A V++R Q++EL EGF ++ + ++ +V A+ Y
Sbjct: 139 ADLPARVISR--QRRELRSGLRNLAREGFRKVHVLKSVEEVDQAVIAY 184
>gi|169604696|ref|XP_001795769.1| hypothetical protein SNOG_05363 [Phaeosphaeria nodorum SN15]
gi|111066634|gb|EAT87754.1| hypothetical protein SNOG_05363 [Phaeosphaeria nodorum SN15]
Length = 445
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 74/151 (49%), Gaps = 15/151 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
++++ G+PG+GKS++ ++ + R+ QDT+ K +C+ +A++ +++G SV
Sbjct: 303 IILLCGSPGAGKSSYYWKHLQPLG--YGRVNQDTL-------KTKCIKAATALIEEGTSV 353
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N + R +VKL V + ++ ++LC R G + +
Sbjct: 354 VVDNTNADPATREIWVKLAQKLNVPIRCILFTASSRLCEHNDAVRALSLGPESNPEKRTI 413
Query: 141 VNRM-----LQKKELPKLSEGFSRITLCQNE 166
+ ++ + PKLSEGF+ IT+ E
Sbjct: 414 LPKLAFTGFASRYREPKLSEGFTEITMIDFE 444
>gi|392596000|gb|EIW85323.1| PNK3P-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 415
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 30/156 (19%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q +VI VG P GK+T S+ + I QDT+ T+ +C+ +A A++ GK
Sbjct: 249 QEIVIFVGYPCLGKTTLYHQHFASAG--YVHINQDTLK-----TRAKCVKAAEEAIQSGK 301
Query: 80 SVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAA 139
S +D N ++ R +V+L A L++P + C + NL AA
Sbjct: 302 SCVIDNTNRDKATRKFYVQL--------AAKLNVPIRCCTFSGSIELAWHNNLYRAFAAI 353
Query: 140 VVNRMLQKKEL---------------PKLSEGFSRI 160
+ K++L P+L EGFSRI
Sbjct: 354 PKSDTEAKRDLVPYLAFLSFKEAYEEPELGEGFSRI 389
>gi|386382406|ref|ZP_10068019.1| metallophosphoesterase [Streptomyces tsukubaensis NRRL18488]
gi|385670164|gb|EIF93294.1| metallophosphoesterase [Streptomyces tsukubaensis NRRL18488]
Length = 879
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKS+F + + + C+ D ++ SG L A L
Sbjct: 41 LVVLIGASGSGKSSFARRHFKPTEIISSDFCRGLVADDENDQSASGDAFDVLHYIAGKRL 100
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D N++ E R V+L E DV AVVLDLP ++C R+ R + G +
Sbjct: 101 AAGRLTVVDATNVQTESRKQLVRLAR-EHDVLPIAVVLDLPEEVCAERNALRPDRAGMPR 159
Query: 134 G--GKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAA 172
+ A + R L+ E EGF ++ + ++ +V AA
Sbjct: 160 RVIKRHRAELRRSLRGLE----REGFRKVHVLRSTTEVDAA 196
>gi|357410605|ref|YP_004922341.1| metallophosphoesterase [Streptomyces flavogriseus ATCC 33331]
gi|320007974|gb|ADW02824.1| metallophosphoesterase [Streptomyces flavogriseus ATCC 33331]
Length = 847
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 21/164 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV++VGA GSGKSTF + + + C+ D ++ SG L A L
Sbjct: 15 LVVLVGASGSGKSTFARRHFKPTEIISSDFCRGLVADDENDQSASGDAFDVLHYIAGKRL 74
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D N++ E R V+L + DV A+VLDLP ++C +R+ R + +
Sbjct: 75 AAGRLTVVDATNVQPESRKQLVQL-ARQYDVLPIAIVLDLPEEVCQARNATRPD-----R 128
Query: 134 GGKAAAVVNRMLQKKELPKL-----SEGFSRITLCQNENDVQAA 172
G VV R ++EL + EGF ++ + + E + A
Sbjct: 129 AGMPRHVVQR--HRRELRRSLRGLEREGFRKVHVLRTEEEADTA 170
>gi|440292653|gb|ELP85840.1| polynucleotide phosphatase/kinase, putative [Entamoeba invadens
IP1]
Length = 394
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 14/141 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+VI VG+P SGKS+F E + + W + QDT+ G+K CL++A ++ SV
Sbjct: 242 MVIFVGSPASGKSSFYEKYFKPNGYQW--VNQDTL-----GSKSACLSAARKSI-INNSV 293
Query: 82 FLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N E R +++ + V V D K+ + R + K +
Sbjct: 294 VIDNTNPSIEIREEYITIANKAGYQVRCVFFDYDKKISFHLNKFR----AMVSTKKIPDI 349
Query: 141 -VNRMLQKKELPKLSEGFSRI 160
++ +K ELP ++EGF +
Sbjct: 350 AIHSYFKKLELPTIAEGFKEV 370
>gi|451340939|ref|ZP_21911421.1| Serine/threonine protein phosphatase [Amycolatopsis azurea DSM
43854]
gi|449416225|gb|EMD21984.1| Serine/threonine protein phosphatase [Amycolatopsis azurea DSM
43854]
Length = 830
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 22 LVIMVGAPGSGKSTFCE-HV----MRSSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV++VGA GSGKSTF H + SS + D ++ S L A+ L
Sbjct: 10 LVVLVGASGSGKSTFARTHFAPTQVLSSDYFRGLVADDENDQSASAAAFDVLHYVAAKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRI-----EH 128
+ G+ +D N++R R +KL E DV A+VLDLP K+C R+ R EH
Sbjct: 70 EAGRITVIDATNVQRSSRASLLKL-AREHDVMPTAIVLDLPVKVCHERNESRPDRDFGEH 128
Query: 129 EGNLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAA 172
Q G+ ++R L+ E EGF R+ + ++ +V A
Sbjct: 129 VVRRQRGE----LHRSLKSLE----REGFRRVHVLRSVAEVAEA 164
>gi|332880051|ref|ZP_08447735.1| hypothetical protein HMPREF9074_03501 [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332682047|gb|EGJ54960.1| hypothetical protein HMPREF9074_03501 [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 303
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 12/122 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSG---------TKVQCLTSAS 72
L+I+VGAPGSGKSTF + +R+ W R+ +D + G ++ + AS
Sbjct: 4 LLILVGAPGSGKSTFARYFLRTEDN-WVRVNRDDFRLMQFGDSLMIPFYEERISKMVDAS 62
Query: 73 --SALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEG 130
+ LK +V +D N D V D+ V D+P + + R KR G
Sbjct: 63 VLALLKSDTNVLIDATNTSLRTIQDMVNAYTEYADISFKVFDVPVEELVKRCDKRFAETG 122
Query: 131 NL 132
Sbjct: 123 KF 124
>gi|117606151|ref|NP_001071046.1| bifunctional polynucleotide phosphatase/kinase [Danio rerio]
gi|115527807|gb|AAI24635.1| Zgc:153084 [Danio rerio]
Length = 586
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 17/148 (11%)
Query: 19 KQILVIMVGAPGSGKSTFCE-HVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKK 77
KQ +++ VG PG+GKSTF + H++ + +A + +DT+ G+ C+++ ALK+
Sbjct: 426 KQEIIVAVGFPGAGKSTFFQTHII---PKGYAYVNRDTM-----GSWQHCVSACERALKE 477
Query: 78 GKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKA 137
GKSV +D N + E R ++ + V + A L ++ R +
Sbjct: 478 GKSVAVDNTNPDLESRKRYIDVAQ-SAGVSCRCFNFTASLDQAKHNNRFRE--MVPSATK 534
Query: 138 AAVVNRML-----QKKELPKLSEGFSRI 160
VN M+ +K +P LSEGFS +
Sbjct: 535 HVPVNDMVIHSYKKKFVVPSLSEGFSEV 562
>gi|328769963|gb|EGF80006.1| hypothetical protein BATDEDRAFT_89257 [Batrachochytrium
dendrobatidis JAM81]
Length = 519
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
L+I VG+P SGKS+F + I QDT+ GTK +CL S A+ GKSV
Sbjct: 346 LIICVGSPASGKSSFVTTYLTPLGI--THINQDTL-----GTKNKCLKVLSEAIGSGKSV 398
Query: 82 FLDRCNLEREQRTDFVKL----GGPEVDVHAVVL--DLPAKLC----ISRSVKRIEHE-- 129
+D N ++ R F++ G E VH + L D +LC R ++ H+
Sbjct: 399 VVDNTNPDKTTRKAFIQAAKESAGTECMVHVIALYFDTEMELCRHNNAYRELRHFGHKWV 458
Query: 130 -GNLQGGKA------AAVVNRMLQKKELPKLSEGFSRI 160
GN K+ V + + + P EGF+ I
Sbjct: 459 FGNSDQKKSDHAHVPGMVFHMYAKAHQEPDHDEGFNEI 496
>gi|322786107|gb|EFZ12716.1| hypothetical protein SINV_10950 [Solenopsis invicta]
Length = 566
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 26/164 (15%)
Query: 6 DDTCKAKDEEKKWKQI-LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTK 64
DD CK + E KQ +++MVG+PGSGKS F ++ M+ + + +DT+ T
Sbjct: 395 DDICKPANAELTSKQQEVILMVGSPGSGKSHFAKNYMKE----YEYVNRDTLR-----TW 445
Query: 65 VQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAK-LCISRSV 123
+C+ + L +G+S+ +D N + R F+ A ++P + ++ SV
Sbjct: 446 QKCIAAVQQYLNQGRSMVIDNTNPDPASRKRFID--------EAKKCNVPVRCFVMTTSV 497
Query: 124 KRIEHEGNLQGGKAAA-------VVNRMLQKKELPKLSEGFSRI 160
+ +H + + ++N ++ P L EGF I
Sbjct: 498 EHAKHNNKFRELTDPSHVPVNEIIINSYMKNYVPPTLEEGFKEI 541
>gi|17539954|ref|NP_501503.1| Protein F21D5.5 [Caenorhabditis elegans]
gi|21431949|sp|Q19683.2|YZR5_CAEEL RecName: Full=Uncharacterized protein F21D5.5
gi|11890619|gb|AAG41142.1|AF292046_1 polynucleotide kinase 3' phosphatase [Caenorhabditis elegans]
gi|14530409|emb|CAA91035.2| Protein F21D5.5 [Caenorhabditis elegans]
Length = 407
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+++MVG PGSGKSTF + M + + +DTI GT +C+ + S L GKSV
Sbjct: 252 IILMVGFPGSGKSTFAK--MLGHQHDYKIVNRDTI-----GTWQKCVAATRSYLADGKSV 304
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D + + E R ++ + E+ V ++ + ++ R + + +++V
Sbjct: 305 VIDNTSPDLESRKRYIDV-AKELGVPIRCFEMNCSMEHAQHNIRFRVLTDDNAAEISSMV 363
Query: 142 NRMLQKKEL-PKLSEGFSRIT 161
R+ + K + P LSEGFS+I
Sbjct: 364 LRIHKGKYVEPTLSEGFSQIV 384
>gi|402074772|gb|EJT70281.1| bifunctional polynucleotide phosphatase/kinase [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 485
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 15 EKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSA 74
E+K + +V+ G PG+GKSTF + + + +N+ K TK +CL +AS
Sbjct: 321 ERKNDKDIVLFCGPPGAGKSTFYWKHLEG-------LGYERVNQDKLKTKEKCLAAASDL 373
Query: 75 LKKGKSVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEH---EG 130
+++G+SV +D N + E R +V L V + V P L R +
Sbjct: 374 VQEGRSVAVDSTNPDPETRAQWVALARKRGVPIRCVWFKTPMALAQHNDAVRSMNAMLNP 433
Query: 131 NLQGGKAAAVVNRMLQKKELPKLSEGFSRI 160
+G N + + P+LSEGF I
Sbjct: 434 EARGSLPTIAFNTFGSRFKAPELSEGFQDI 463
>gi|354497640|ref|XP_003510927.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase
[Cricetulus griseus]
gi|344257324|gb|EGW13428.1| Bifunctional polynucleotide phosphatase/kinase [Cricetulus griseus]
Length = 522
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C++S +AL++GK V
Sbjct: 366 VVVTVGFPGAGKSTFVQEHLVSAG--YVHVNRDTL-----GSWQRCVSSCQAALRQGKRV 418
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +++ + V + A L +R R + + +V
Sbjct: 419 VIDNTNPDVPSRARYIQCAR-DAGVPCRCFNFCATLEQARHNNRFREMTDPSHAPVSDMV 477
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ ELP L+EGF I
Sbjct: 478 MFSYRKQFELPMLTEGFQEI 497
>gi|428317249|ref|YP_007115131.1| polynucleotide 3'-phosphatase [Oscillatoria nigro-viridis PCC 7112]
gi|428240929|gb|AFZ06715.1| polynucleotide 3'-phosphatase [Oscillatoria nigro-viridis PCC 7112]
Length = 880
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 22 LVIMVGAPGSGKSTFC-EHVMR----SSARPWARICQDTINKGKSGTKVQCL-TSASSAL 75
LV+++GA GSGKSTF +H + SS + D N+ + + L A+ L
Sbjct: 10 LVVLIGASGSGKSTFARQHFLPTEIISSDYCRGLVSDDENNQAATADAFEVLHLIAAKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
GK +D N++ E R V+L + A+VLDLP KLC R+ +R N
Sbjct: 70 AAGKLTVIDATNVQPESRKPLVELARKYHCFLVAIVLDLPEKLCGDRNQQR----ANRNF 125
Query: 135 GKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQA 171
G V+ R +Q K+ L L EGF + + ++ +++A
Sbjct: 126 GN--HVIRRHVQNLKRSLKSLDREGFRYVYVLRSPEEIEA 163
>gi|228908252|ref|ZP_04072098.1| hypothetical protein bthur0013_24130 [Bacillus thuringiensis IBL
200]
gi|228851450|gb|EEM96258.1| hypothetical protein bthur0013_24130 [Bacillus thuringiensis IBL
200]
Length = 322
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 36/201 (17%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTIN---------KGKSGTKVQ-CLTSA 71
L+ +VG P SGKS++ + +++ R A + D + +GK+G + +
Sbjct: 4 LIYLVGLPASGKSSYAK-MLQKQYRA-AIVATDELRQTLFYSETKQGKTGMLYRYAMERV 61
Query: 72 SSALKKGKSVFLDRCNLEREQRTDFV-KLGG-PEVDVHAVVLDLPAKLCISRSVKRIEHE 129
L++G++V LD N+ERE R + +L P ++ V+D P + C+ R+ +R
Sbjct: 62 REHLEEGRNVILDATNIEREFRVKALHRLRDIPNLEKRCYVVDTPYQECLKRNQER---- 117
Query: 130 GNLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQ-------NENDVQAALDTYSGLGP- 181
+ ++ +M +K E P EG+ +I + + + Q L YS
Sbjct: 118 ---KRTVEERILEKMYKKAEFPLKEEGWDQIEILHTPGSYNISRQEFQELLTRYSSYEEF 174
Query: 182 ---LDTLPHGS----FGQKNP 195
L+T+P S + Q NP
Sbjct: 175 YERLNTIPFFSDMFQYDQGNP 195
>gi|294935940|ref|XP_002781566.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239892403|gb|EER13361.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 105
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
++I++++ G P SGKST +H + + + R+CQD + +K + L L++G
Sbjct: 23 EKIMLMLCGLPCSGKSTLSQHFLVPAG--YVRVCQDVLK-----SKERTLREVERLLEEG 75
Query: 79 KSVFLDRCNLEREQRTDFVKLG 100
+SV LDR N ++ QR F+ L
Sbjct: 76 RSVVLDRTNTDKAQRAPFISLA 97
>gi|428313776|ref|YP_007124753.1| polynucleotide 2',3'-cyclic phosphate phosphodiesterase
[Microcoleus sp. PCC 7113]
gi|428255388|gb|AFZ21347.1| polynucleotide 3'-phosphatase [Microcoleus sp. PCC 7113]
Length = 916
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 83/182 (45%), Gaps = 22/182 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTIN---KGKSGTK--VQCLTS-ASSAL 75
LV+++GA GSGKS+F + + + C+ ++ +S TK + L A+ L
Sbjct: 11 LVVLIGASGSGKSSFARKHFKVTEVLSSDFCRGIVSDDENDQSATKDAFEVLHYIAAKRL 70
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHEGN 131
GK +D N++ E R VKL + H A+VL+LP +LC R+ R +
Sbjct: 71 AAGKLTVIDATNVQPEDRKPLVKLAR---EYHCLPVAIVLNLPEQLCHDRNCARPDR--- 124
Query: 132 LQGGKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAALDTYSGLGPLDTLPHG 188
+ VV R Q K+ L L EGF I + + DV+AA+ L HG
Sbjct: 125 ---NFGSHVVRRQSQNLKRSLRSLQREGFRHIHILNSLEDVEAAVIKRQPLWNNRKHEHG 181
Query: 189 SF 190
F
Sbjct: 182 PF 183
>gi|380492638|emb|CCF34458.1| polynucleotide kinase 3 phosphatase [Colletotrichum higginsianum]
Length = 452
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 13/152 (8%)
Query: 15 EKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSA 74
EKK KQ +V+ G PG+GKSTF ++ + RI QD + T+ +C+ +A
Sbjct: 288 EKKNKQDIVLSCGPPGAGKSTFFWKHLKPLG--YERINQDILK-----TREKCVQAAKEL 340
Query: 75 LKKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLC----ISRSVKRIEHE 129
L+ G+SV +D N + + R +V+L ++ + + P +C RS+ +I +
Sbjct: 341 LEGGQSVAIDNTNADPDTRAVWVQLAQKHQLPIRCLWFKTPLHICEHNDAVRSMNKILNP 400
Query: 130 GNLQGGKAAAVVNRMLQKKELPKLSEGFSRIT 161
+ A N + + PK+ EGF IT
Sbjct: 401 ESRTALPKMA-FNGFKSRFKEPKMKEGFQDIT 431
>gi|405118166|gb|AFR92941.1| polynucleotide kinase 3' phosphatase [Cryptococcus neoformans var.
grubii H99]
Length = 290
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+VI VG P SGKS+F + + + + QDT+ T+ +CL A A+K GKSV
Sbjct: 133 IVIFVGYPASGKSSFFRKHFQPAG--YVHVNQDTLR-----TREKCLNVAEQAVKGGKSV 185
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKL 117
+D N RE R +V L A L++P +L
Sbjct: 186 VIDNTNRNRETRAYWVAL--------ASKLNVPIRL 213
>gi|195110959|ref|XP_002000047.1| GI22747 [Drosophila mojavensis]
gi|193916641|gb|EDW15508.1| GI22747 [Drosophila mojavensis]
Length = 520
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
++IMVG PGSGKS FC V+ + + I DT+ G+ CL + AL KS
Sbjct: 364 MIIMVGLPGSGKSHFCAEVL--GPKGYKIISADTL-----GSTQACLNACQRALNADKSC 416
Query: 82 FLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAA-- 138
+D N++ R F+ L +V V+++ A + + I + L+ +
Sbjct: 417 VVDNTNVDVASRKRFMSLAMEKDVPCRCFVMNVTA----AHAKHNIAYRELLETDHSPIN 472
Query: 139 -AVVNRMLQKKELPKLSEGFSRI 160
V N M +K P + EGF+ I
Sbjct: 473 DMVFNMMKKKYVAPTMDEGFTSI 495
>gi|408681502|ref|YP_006881329.1| putative phosphatase [Streptomyces venezuelae ATCC 10712]
gi|328885831|emb|CCA59070.1| putative phosphatase [Streptomyces venezuelae ATCC 10712]
Length = 856
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 19/163 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV++VGA GSGKSTF + + + C+ D ++ S L L
Sbjct: 24 LVVLVGATGSGKSTFARRHFKPTEIVSSDFCRGLVADDENDQSASKDAFDVLHYIVGKRL 83
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
G+ +D N+++E R V+L +V A+VLDLP ++C SR+ R + +
Sbjct: 84 AAGRLAVVDATNVQQEARRQLVQLARSYDVLPIAIVLDLPEEVCRSRNAARPD-----RA 138
Query: 135 GKAAAVVNRMLQKKELPKL-----SEGFSRITLCQNENDVQAA 172
G A V+ R ++EL + EGF ++ + ++ +V AA
Sbjct: 139 GMPAHVIQR--HRRELRRSLRGLEREGFRKVHVLRSVEEVDAA 179
>gi|290982817|ref|XP_002674126.1| predicted protein [Naegleria gruberi]
gi|284087714|gb|EFC41382.1| predicted protein [Naegleria gruberi]
Length = 439
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
KQ +V+ G P SGK+TF + + + + +DT+N T +C+ + A++KG
Sbjct: 282 KQEIVVFQGWPASGKTTFAKRFFIPAG--YVHVNRDTLN-----TIPKCVKACKEAIQKG 334
Query: 79 KSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKR--IEH-----EGN 131
KSV +D N + + R +++ + A ++P + C S +V+R EH E
Sbjct: 335 KSVVVDNTNPDADSRKNYIDI--------AEEFEIPIR-CFSFNVERELAEHLNVLRENR 385
Query: 132 LQGGK---AAAVVNRMLQKKELPKLSEGFSRI 160
+GG N +K E P EGFS +
Sbjct: 386 SKGGHPHVPGVGYNTYNKKLEEPSEDEGFSEV 417
>gi|340516719|gb|EGR46966.1| predicted protein [Trichoderma reesei QM6a]
Length = 465
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 29/160 (18%)
Query: 15 EKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSA 74
EKK Q +V+ G PG+GKSTF V++ + R+ QDT+ T+ +C+ +A
Sbjct: 301 EKKNDQDVVLFCGPPGAGKSTFYFKVLKPLG--YERVNQDTLK-----TRDKCIQAAKDL 353
Query: 75 LKKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQ 133
LK GKSV +D N + + R ++ + V + V P +C EH ++
Sbjct: 354 LKAGKSVVVDNTNPDPDTRALWIDVARKASVPIRCVWFSTPVMVC--------EHNDAVR 405
Query: 134 GGKAA------------AVVNRMLQKKELPKLSEGFSRIT 161
AA A + KE PK EGF +T
Sbjct: 406 AHNAALNPEARESLPKLAFTGFASRFKE-PKEKEGFQDVT 444
>gi|310801674|gb|EFQ36567.1| polynucleotide kinase 3 phosphatase [Glomerella graminicola M1.001]
Length = 452
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 17/154 (11%)
Query: 15 EKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSA 74
EKK KQ +VI G PG+GKSTF ++ + R+ QD + T+ +C+ SA
Sbjct: 288 EKKNKQDIVIFCGPPGAGKSTFFWKHLKPLG--YERVNQDILK-----TREKCVQSAKEL 340
Query: 75 LKKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLC-ISRSVKRIEHEGNL 132
L G+S+ +D N + + R + +L +V V V P +C + +V+ + N
Sbjct: 341 LNDGQSIAIDNTNADPDTRAVWGQLAKKHKVPVRCVWFKTPLHICEHNDAVRSMNKSLNP 400
Query: 133 QGGKAAAVVNRML-----QKKELPKLSEGFSRIT 161
+ + V+ RM + + PK+ EGF IT
Sbjct: 401 E---SRTVLPRMAFNGFKSRFKEPKVKEGFQDIT 431
>gi|66813438|ref|XP_640898.1| SAP DNA-binding domain-containing protein [Dictyostelium discoideum
AX4]
gi|60468911|gb|EAL66911.1| SAP DNA-binding domain-containing protein [Dictyostelium discoideum
AX4]
Length = 544
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+VI VG P +GKSTF + +A I QDT+ K QCL +A++AL +GKSV
Sbjct: 386 MVISVGYPAAGKSTFARKYFGPAG--YAIINQDTLK-----DKAQCLKAANAALAQGKSV 438
Query: 82 FLDRCNLEREQRTDFVKLG 100
+D N ++ R +++ L
Sbjct: 439 IIDNTNPTKDVRAEYLALA 457
>gi|116205724|ref|XP_001228671.1| hypothetical protein CHGG_02155 [Chaetomium globosum CBS 148.51]
gi|88182752|gb|EAQ90220.1| hypothetical protein CHGG_02155 [Chaetomium globosum CBS 148.51]
Length = 307
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 9/126 (7%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q +V+ VG PG+GKSTF + + R+ QDT+ +K +C +A+ L KG+
Sbjct: 188 QDIVLFVGFPGAGKSTFYWKYLEPLN--YERVNQDTLK-----SKDKCFKTAADLLGKGE 240
Query: 80 SVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAA 138
S+ +D N + + R+ ++ L +V + P +LC + R +E + G +A
Sbjct: 241 SIVVDNTNADVDTRSQWIALARKHKVPIRCFWFQTPLQLCEHNAAARALNE-KVHGDISA 299
Query: 139 AVVNRM 144
RM
Sbjct: 300 HGARRM 305
>gi|336273078|ref|XP_003351294.1| hypothetical protein SMAC_03598 [Sordaria macrospora k-hell]
Length = 484
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q L++ VG PG+GKSTF ++ + R+ QD + +K +C +A+ LK+G
Sbjct: 325 QELILFVGPPGAGKSTFYWRHLKPLG--YERVNQDVLK-----SKDKCFKAAAEYLKEGD 377
Query: 80 SVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLC----ISRSV-KRIEHEGNLQ 133
SV +D N + + R +V+L + V V V P +C RS+ K + E
Sbjct: 378 SVVVDNTNPDPDTRKQWVELAQKQGVPVRCVWFRTPLVVCEHNDAVRSLNKPLNPESRTS 437
Query: 134 GGKAAAVVNRMLQKKELPKLSEGFSRIT 161
K A N + + PK EGF +T
Sbjct: 438 LPKLA--FNGFNARFKEPKAKEGFQDVT 463
>gi|348670894|gb|EGZ10715.1| hypothetical protein PHYSODRAFT_518551 [Phytophthora sojae]
Length = 479
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 23/159 (14%)
Query: 33 KSTFCEHVMRSSAR-------PWARICQDTINKGKSGTKVQCLTSASSALKKG--KSVFL 83
K + H S+ R PW I D + G+ G + +L +G + L
Sbjct: 255 KRSIASHAAPSTVRANNALYQPWIEIHSDEV--GRKGCE--------RSLGQGSLRRAIL 304
Query: 84 DRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVVN 142
DRCN R F+ L A+V D+P KLC +R+++R +H G + +
Sbjct: 305 DRCNGVAADRKKFLGLAATWSKHATAIVFDIPTKLCEARAMQRADHPTLPPGRRVGFAIR 364
Query: 143 RMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGP 181
+ E P L+EGF I + V+AAL+ L P
Sbjct: 365 QHSSTFEYPDLAEGFETIVRITS---VEAALELVDMLSP 400
>gi|187608181|ref|NP_001120633.1| polynucleotide kinase 3'-phosphatase [Xenopus (Silurana)
tropicalis]
gi|171846522|gb|AAI61787.1| LOC100145800 protein [Xenopus (Silurana) tropicalis]
Length = 597
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 27/150 (18%)
Query: 22 LVIMVGAPGSGKSTFC-EHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+V+ VG PG+GKSTF EH++ P C N+ GT +C+ + +ALK+GKS
Sbjct: 441 VVVAVGFPGAGKSTFFKEHMI-----PKGYECA---NRDTLGTWQKCVAACEAALKRGKS 492
Query: 81 VFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAK-LCISRSVKRIEHEGNLQ----GG 135
+ +D N + E R+ ++ A +PA+ + +++ +H + G
Sbjct: 493 IVIDNTNPDLESRSRYIDC--------AKKAGVPARCFLFTATIEEAKHNNRFREMTYTG 544
Query: 136 KAAAVVNRML-----QKKELPKLSEGFSRI 160
K VN M+ K P SEGFS I
Sbjct: 545 KGHVSVNDMVINSYRTKFVEPSASEGFSEI 574
>gi|301107762|ref|XP_002902963.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098081|gb|EEY56133.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 459
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 46 RPWARICQDTINKGKSGTKVQCLTSASSALKKG--KSVFLDRCNLEREQRTDFVKLGGPE 103
+PW I D I G+ G + ++ +G + LDRCN R F+ L
Sbjct: 255 QPWTEITSDEI--GRKGCE--------RSIGQGGIRRAILDRCNGIAADRKKFLSLAATW 304
Query: 104 VDVHA--VVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRIT 161
HA VV D+P+KLC +R+++R++H G + + + E P+L EGF +
Sbjct: 305 SQ-HATVVVFDMPSKLCEARAMQRVDHPTLPPGRRVGFAIRQHSSTFEFPELDEGFQTLV 363
Query: 162 LCQNENDVQAALD 174
+ V+AAL+
Sbjct: 364 ---HITSVEAALE 373
>gi|380092814|emb|CCC09567.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 487
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q L++ VG PG+GKSTF ++ + R+ QD + +K +C +A+ LK+G
Sbjct: 328 QELILFVGPPGAGKSTFYWRHLKPLG--YERVNQDVLK-----SKDKCFKAAAEYLKEGD 380
Query: 80 SVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLC----ISRSV-KRIEHEGNLQ 133
SV +D N + + R +V+L + V V V P +C RS+ K + E
Sbjct: 381 SVVVDNTNPDPDTRKQWVELAQKQGVPVRCVWFRTPLVVCEHNDAVRSLNKPLNPESRTS 440
Query: 134 GGKAAAVVNRMLQKKELPKLSEGFSRIT 161
K A N + + PK EGF +T
Sbjct: 441 LPKLA--FNGFNARFKEPKAKEGFQDVT 466
>gi|299541864|ref|ZP_07052187.1| kinase-like protein [Lysinibacillus fusiformis ZC1]
gi|298725602|gb|EFI66243.1| kinase-like protein [Lysinibacillus fusiformis ZC1]
Length = 318
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 16/151 (10%)
Query: 22 LVIMVGAPGSGKSTFCEH-------VMRSSARPWARICQDTINKGKSGTKVQCLTSASSA 74
++ VG PGSGKSTF + ++ SS + D+ K KS + L +
Sbjct: 3 VIFTVGLPGSGKSTFVKQLAKNENAIVLSSDAIRQELFGDS-TKQKSRIVFRTLYERLND 61
Query: 75 L-KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQ 133
L KG SV +D N+ERE+R ++ V D P +C++R+ +R H
Sbjct: 62 LVTKGFSVIVDATNIERERRMFALRKIPSTVQKVCYYFDTPYSICVARNQQRKRH----- 116
Query: 134 GGKAAAVVNRMLQKKELPKLSEGFSRITLCQ 164
V+ +M + E P L EGF+ + +
Sbjct: 117 --VPLIVMEKMRKHLEFPTLGEGFNELHIIH 145
>gi|424739304|ref|ZP_18167723.1| kinase-like protein [Lysinibacillus fusiformis ZB2]
gi|422946701|gb|EKU41107.1| kinase-like protein [Lysinibacillus fusiformis ZB2]
Length = 318
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 16/151 (10%)
Query: 22 LVIMVGAPGSGKSTFCEH-------VMRSSARPWARICQDTINKGKSGTKVQCLTSASSA 74
++ VG PGSGKSTF + ++ SS + D+ K KS + L +
Sbjct: 3 VIFTVGLPGSGKSTFVKQLAKNENAIVLSSDAIRQELFGDS-TKQKSRIVFRTLYERLND 61
Query: 75 L-KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQ 133
L KG SV +D N+ERE+R ++ V D P +C++R+ +R H
Sbjct: 62 LVTKGFSVIVDATNIERERRMFALRKIPSTVQKVCYYFDTPYSICVARNQQRKRH----- 116
Query: 134 GGKAAAVVNRMLQKKELPKLSEGFSRITLCQ 164
V+ +M + E P L EGF+ + +
Sbjct: 117 --VPLIVMEKMRKHLEFPTLGEGFNELHIIH 145
>gi|348170232|ref|ZP_08877126.1| protein phosphatase [Saccharopolyspora spinosa NRRL 18395]
Length = 852
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 20/180 (11%)
Query: 22 LVIMVGAPGSGKSTFCE-HV----MRSSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA G+GKSTF H + SS + D ++ S L A L
Sbjct: 10 LVVLIGASGAGKSTFARTHFAPTQVLSSDFFRGLVADDVTDQSASAAAFDALHYVAGKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
G+ +D N++R R+ V+L V A+VLD+P +C+ R+ +R + +
Sbjct: 70 AAGRVTVVDATNVQRGARSALVELARKHHVLPVAIVLDMPESVCLERNAERPDRD----F 125
Query: 135 GKAAAVVNRMLQKKELPKLS-EGFSRITLCQNENDVQAAL--------DTYSGLGPLDTL 185
G +R ++ L L EGF R+ + ++ +V AA D + GP D +
Sbjct: 126 GAPVVRRHRAELRRSLKSLQREGFRRVHVLRSVEEVDAATIEIEPLLNDKRAETGPFDVI 185
>gi|308176927|ref|YP_003916333.1| macro domain-containing protein [Arthrobacter arilaitensis Re117]
gi|307744390|emb|CBT75362.1| macro domain-containing protein [Arthrobacter arilaitensis Re117]
Length = 188
Score = 52.8 bits (125), Expect = 6e-04, Method: Composition-based stats.
Identities = 39/104 (37%), Positives = 52/104 (50%), Gaps = 20/104 (19%)
Query: 348 FVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPG 407
+ GDIT L+ + I NAAN L GGGGV+ AI +AAGP+L A E + YP
Sbjct: 6 YRGDITTLHV------DAIVNAANPSLL-GGGGVDGAIHTAAGPSLLAACREIRANRYPD 58
Query: 408 NSVIVPLPSTSPLCGREGVTH---VIHVLGPNM-----NPRRPN 443
+PS + + G H V+H PN+ NP +PN
Sbjct: 59 G-----IPSGIAVATKAGNLHAKWVVHTAAPNLALATANPVKPN 97
>gi|170782651|ref|YP_001710985.1| phosphatase [Clavibacter michiganensis subsp. sepedonicus]
gi|169157221|emb|CAQ02405.1| putative phosphatase [Clavibacter michiganensis subsp. sepedonicus]
Length = 861
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 32/189 (16%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTI---------NKGKSGTKVQCLT 69
+ LV++VGA GSGKSTF R+ P+ + D ++ + + L
Sbjct: 14 RMSLVLLVGASGSGKSTFA----RTHFGPYEVLSSDVFRGLVSNDENDQSATAAAFEALR 69
Query: 70 S-ASSALKKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIE 127
A+ L++G +D N++ E R V+L +V A+VLD+P +C+ R+ R +
Sbjct: 70 HVAAHRLRRGLMTVIDATNVQAESRRSLVQLARDHDVLPVAIVLDVPVGVCVERNAARTD 129
Query: 128 HEGNLQGGKAAAVVNR---MLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGL----- 179
A+VV R LQ+ EGF ++ + + +++ +A T L
Sbjct: 130 RTFG------ASVVKRQHDQLQRSLKGLGREGFRKVHVLRGVDEIASARFTVEPLLNDLR 183
Query: 180 ---GPLDTL 185
GP D +
Sbjct: 184 HERGPFDAI 192
>gi|358459927|ref|ZP_09170119.1| Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) [Frankia sp. CN3]
gi|357076846|gb|EHI86313.1| Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) [Frankia sp. CN3]
Length = 925
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 26/183 (14%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV++VGA G+GKSTF R + + C+ D ++ +G L A L
Sbjct: 27 LVVLVGASGAGKSTFARTHFRPTQVLSSDFCRGLVADDENDQAATGDAFDVLRYIAGKRL 86
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D N++R R V+L E DV A+VLD P ++C+ R+ R + +
Sbjct: 87 AAGRLTVVDATNVQRHARQSLVELAR-EHDVLPVAIVLDPPERVCLERNAARPDRDFG-- 143
Query: 134 GGKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAALDTYSGL--------GPL 182
A V+ R ++ L L+ EGF + + + AA Y+ L GP
Sbjct: 144 ----AHVIRRQRADLRRSLRGLTREGFRHVHVLSSVAQASAATIAYTRLFSDLRHETGPF 199
Query: 183 DTL 185
D +
Sbjct: 200 DVI 202
>gi|126653492|ref|ZP_01725585.1| hypothetical protein BB14905_23248 [Bacillus sp. B14905]
gi|126589770|gb|EAZ83904.1| hypothetical protein BB14905_23248 [Bacillus sp. B14905]
Length = 318
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 81/205 (39%), Gaps = 35/205 (17%)
Query: 22 LVIMVGAPGSGKSTFCEH-------VMRSSARPWARICQDTINKGKSGTKVQCLTSASSA 74
++ VG PGSGKSTF + V+ SS + D K KS + L +
Sbjct: 3 VIFTVGLPGSGKSTFVKQLAKRENAVVLSSDAIRQELFGDA-TKQKSRQVFRTLYERLND 61
Query: 75 L-KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQ 133
L KG +V +D N+ERE+R ++ V D P +C++R+ +R +
Sbjct: 62 LVAKGYTVIVDATNIERERRIFALRKLPSSVRKECYYFDTPYSICVARNQQR-------K 114
Query: 134 GGKAAAVVNRMLQKKELPKLSEGFSR-----------------ITLCQNENDVQAALDTY 176
V+ +M + E P EGF I+L Q E + + T
Sbjct: 115 RNVPLVVMEKMSKHLEFPTAGEGFDEVHIVHESSPYAISKQQFISLIQREPNYEELFQTL 174
Query: 177 SGLGPLDTLPHGSFGQKNPDAKIQL 201
+ + H F Q+NP + L
Sbjct: 175 RAIPLFKEIYH--FNQENPHHQFLL 197
>gi|425701298|gb|AFX92460.1| putative bifunctional polynucleotide phosphatase/kinase [Megavirus
courdo11]
Length = 400
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
K+ +++M+G PGSGKS F + + IN+ TKV+CL+ L KG
Sbjct: 236 KKEMIVMIGPPGSGKSYFANKYIVPQNYVY-------INRDTCKTKVKCLSETKKVLDKG 288
Query: 79 KSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGG--K 136
K++ +D N + R ++ L H + + + I + + + H + QG K
Sbjct: 289 KNIVIDNTNPDILSRMEYTSLAKQYGYKHIRAIIINTEEAIYKHLNNVRHIYS-QGKIPK 347
Query: 137 AAAVVNRMLQKKEL-PKLSEGFSRI 160
+ + + +K + PK SE F I
Sbjct: 348 VSDIAYNIYKKNYIEPKKSENFDII 372
>gi|423316542|ref|ZP_17294447.1| polynucleotide kinase-phosphatase [Bergeyella zoohelcum ATCC 43767]
gi|405583592|gb|EKB57532.1| polynucleotide kinase-phosphatase [Bergeyella zoohelcum ATCC 43767]
Length = 874
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 85/194 (43%), Gaps = 35/194 (18%)
Query: 22 LVIMVGAPGSGKSTFCEHVMR-----SSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV+++G GSGKS+F + + + SS + A + D N+ + L A L
Sbjct: 26 LVVLIGVSGSGKSSFAKKLFKPTEILSSDQCRAWVSDDENNQAATNDAFDVLHYIADKRL 85
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHE-G 130
K G +D N+++ R ++L + H A+VLDLP K+C R+ R++ G
Sbjct: 86 KNGLLTVIDATNVQKSARKGLIELAK---NHHCLPVAIVLDLPEKVCEERNQNRVDRNFG 142
Query: 131 NLQGGKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAAL---------DTYSG 178
N V+ R Q KK + L EGF I + ++ +V A D
Sbjct: 143 N-------HVIRRQAQDLKKSIKGLKHEGFRHIYVLKSAEEVNAVEVIKREKLYNDKKEE 195
Query: 179 LGPLDTL--PHGSF 190
GP D + HG F
Sbjct: 196 KGPFDIIGDVHGCF 209
>gi|363540290|ref|YP_004894466.1| mg415 gene product [Megavirus chiliensis]
gi|448825369|ref|YP_007418300.1| putative bifunctional polynucleotide phosphatase/kinase [Megavirus
lba]
gi|350611455|gb|AEQ32899.1| putative bifunctional polynucleotide phosphatase/kinase [Megavirus
chiliensis]
gi|444236554|gb|AGD92324.1| putative bifunctional polynucleotide phosphatase/kinase [Megavirus
lba]
Length = 403
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
K+ +++M+G PGSGKS F + + IN+ TKV+CL+ L KG
Sbjct: 239 KKEMIVMIGPPGSGKSYFANKYIVPQNYVY-------INRDTCKTKVKCLSETKKVLDKG 291
Query: 79 KSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGG--K 136
K++ +D N + R ++ L H + + + I + + + H + QG K
Sbjct: 292 KNIVIDNTNPDILSRMEYTSLAKQYGYKHIRAIIINTEEAIYKHLNNVRHIYS-QGKIPK 350
Query: 137 AAAVVNRMLQKKEL-PKLSEGFSRI 160
+ + + +K + PK SE F I
Sbjct: 351 VSDIAYNIYKKNYIEPKKSENFDII 375
>gi|371943715|gb|AEX61543.1| putative bifunctional polynucleotide phosphatase kinase [Megavirus
courdo7]
Length = 400
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
K+ +++M+G PGSGKS F + + IN+ TKV+CL+ L KG
Sbjct: 236 KKEMIVMIGPPGSGKSYFANKYIVPQNYVY-------INRDTCKTKVKCLSETKKVLDKG 288
Query: 79 KSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGG--K 136
K++ +D N + R ++ L H + + + I + + + H + QG K
Sbjct: 289 KNIVIDNTNPDILSRMEYTSLAKQYGYKHIRAIIINTEEAIYKHLNNVRHIYS-QGKIPK 347
Query: 137 AAAVVNRMLQKKEL-PKLSEGFSRI 160
+ + + +K + PK SE F I
Sbjct: 348 VSDIAYNIYKKNYIEPKKSENFDII 372
>gi|406673424|ref|ZP_11080647.1| polynucleotide kinase-phosphatase [Bergeyella zoohelcum CCUG 30536]
gi|405586610|gb|EKB60370.1| polynucleotide kinase-phosphatase [Bergeyella zoohelcum CCUG 30536]
Length = 858
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 85/194 (43%), Gaps = 35/194 (18%)
Query: 22 LVIMVGAPGSGKSTFCEHVMR-----SSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV+++G GSGKS+F + + + SS + A + D N+ + L A L
Sbjct: 10 LVVLIGVSGSGKSSFAKKLFKPTEILSSDQCRAWVSDDENNQAATNDAFDVLHYIADKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHE-G 130
K G +D N+++ R ++L + H A+VLDLP K+C R+ R++ G
Sbjct: 70 KNGLLTVIDATNVQKSARKGLIELAK---NHHCLPVAIVLDLPEKVCEERNQNRVDRNFG 126
Query: 131 NLQGGKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAAL---------DTYSG 178
N V+ R Q KK + L EGF I + ++ +V A D
Sbjct: 127 N-------HVIRRQAQDLKKSIKGLKHEGFRHIYVLKSAEEVNAVEVIKREKLYNDKKEE 179
Query: 179 LGPLDTL--PHGSF 190
GP D + HG F
Sbjct: 180 KGPFDIIGDVHGCF 193
>gi|291242191|ref|XP_002740993.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 423
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 65/151 (43%), Gaps = 24/151 (15%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
KQ +++MVG P SGKSTF + + + +N GT+ +C + L+ G
Sbjct: 265 KQEMIVMVGYPASGKSTFSRNYLVPHD-------YEIVNMDTLGTQSKCKKLTNQVLEAG 317
Query: 79 KSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQ----- 133
KSV +D N + R D++ L A +PA+ ++ + H NL
Sbjct: 318 KSVVIDNTNPHKYIRKDYMDL--------AKAYGVPARCFWFQTSLELAHHMNLYRQTQT 369
Query: 134 GGKAAAV----VNRMLQKKELPKLSEGFSRI 160
GK V N P+L+EGFS I
Sbjct: 370 RGKTRRVPDVAFNVFKMNFSEPELAEGFSEI 400
>gi|401396551|ref|XP_003879849.1| hypothetical protein NCLIV_003010 [Neospora caninum Liverpool]
gi|325114257|emb|CBZ49814.1| hypothetical protein NCLIV_003010 [Neospora caninum Liverpool]
Length = 720
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI++GAPGSGKST E + + I QD + T+ +C+ + AL + ++V
Sbjct: 532 LVILIGAPGSGKSTLTETAFKD----FVCIRQDDLK-----TQGRCIKACEKALNEKRNV 582
Query: 82 FLDRCNLEREQRTDFVKLGGP--EVDVHAVVLDLPAKLC 118
+D N R+ R ++KLG + VVL+ P ++C
Sbjct: 583 VIDMQNATRKTREPYIKLGKALGTHRIRCVVLNWPEEMC 621
>gi|345480130|ref|XP_003424089.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase-like
isoform 2 [Nasonia vitripennis]
Length = 590
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
KQ LVIMVG PGSGKS H ++ + + I +DT+ G +C+ AL +G
Sbjct: 393 KQELVIMVGCPGSGKS----HFAKTHLKNYYYINRDTL-----GNWQKCVAKTDEALAQG 443
Query: 79 KSVFLDRCNLEREQRTDFVKLGGPE---VDVHAVVLD 112
KSV +D N ++ R+ +V++ V A+ LD
Sbjct: 444 KSVVVDNTNPDKVSRSRYVQVAKKHRVPVRCFAMTLD 480
>gi|242766578|ref|XP_002341198.1| DNA 3'-phosphatase Tpp1, putative [Talaromyces stipitatus ATCC
10500]
gi|218724394|gb|EED23811.1| DNA 3'-phosphatase Tpp1, putative [Talaromyces stipitatus ATCC
10500]
Length = 433
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 17/147 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI G+PG+GKSTF ++ + R+ QD + T+ +C+ A+ L G SV
Sbjct: 276 LVIFCGSPGAGKSTFYWKYLKPLG--YERVNQDFLK-----TRQKCIKVATDHLSAGHSV 328
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEG------NLQG 134
+D N E R ++ L + + + P LC R + L
Sbjct: 329 AVDNTNANIETRKYWIDLAKEFSIPIRCIYFTSPPHLCRHNDAVRASNPSLNPESRTLLP 388
Query: 135 GKAAAVVNRMLQKKELPKLSEGFSRIT 161
G A A R ++ P L+EGF IT
Sbjct: 389 GMAFADFARRFEE---PTLAEGFEDIT 412
>gi|156083503|ref|XP_001609235.1| polynucleotide kinase 3'-phosphatase [Babesia bovis T2Bo]
gi|154796486|gb|EDO05667.1| polynucleotide kinase 3'-phosphatase, putative [Babesia bovis]
Length = 434
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 59/142 (41%), Gaps = 14/142 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQ--CLTSASSALKKGK 79
LVI+VG P GK+ CE + QD I S K CL AS L++
Sbjct: 283 LVILVGPPSCGKTFLCEKHL-----------QDFIRISDSAYKSAEACLDEASKCLQRKD 331
Query: 80 SVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAA 138
V +D CN R ++ L V + LD+ + I R + + Q +
Sbjct: 332 KVVIDSCNALESDREPYISLARNHGVKCTVIYLDVSSDFAIHFHRYRKIMKLSPQRLPSL 391
Query: 139 AVVNRMLQKKELPKLSEGFSRI 160
+ R ++ E PK SEGF R+
Sbjct: 392 DSIYRYYKRLEPPKESEGFDRM 413
>gi|168700499|ref|ZP_02732776.1| metallophosphoesterase [Gemmata obscuriglobus UQM 2246]
Length = 877
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 13/160 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMR-----SSARPWARICQDTINKGKSGTKVQCL-TSASSAL 75
LV++VG GSGK+TF R SS +C D +N+ S + L L
Sbjct: 10 LVLLVGPSGSGKTTFARKHFRPTEVLSSDAFRGMVCDDEMNQAASEDAFELLHLVCEKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHE--GNL 132
+ GK +D N+ E R F++L V AVV D A C +R+ +R G
Sbjct: 70 RLGKLTVIDATNVRTEARKPFLELARKYHAQVTAVVFDFSADFCHARNQQRAAERPFGPH 129
Query: 133 QGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAA 172
+ A + R L + E EG R+ + ++E V A
Sbjct: 130 VTQRHAEDLRRSLGRLE----DEGVRRVFVLKDEEQVAGA 165
>gi|338709884|ref|XP_001917391.2| PREDICTED: bifunctional polynucleotide phosphatase/kinase [Equus
caballus]
Length = 521
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+T+ +AL++ K V
Sbjct: 367 VVVAVGFPGAGKSTFLQEHLVSAG--YVHVNRDTL-----GSWQRCVTACEAALRQRKRV 419
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRI-EHEGNLQGGKAAAV 140
+D N + + R +VK + V A L +R R E G+ + V
Sbjct: 420 VIDNTNPDVQSRARYVKCAQ-DAGVPCRCFLFSASLEQARHNNRFREMSGSPHAPVSDVV 478
Query: 141 VNRMLQKKELPKLSEGFSRI 160
+ ++ E P L+EGFS I
Sbjct: 479 MFGYRKQFEAPTLAEGFSAI 498
>gi|170589687|ref|XP_001899605.1| DNA 3'-phosphatase family protein [Brugia malayi]
gi|158593818|gb|EDP32413.1| DNA 3'-phosphatase family protein [Brugia malayi]
Length = 466
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
++I VG PG GKS+ + + + + + +DT+ T +C+ +A LK+ ++V
Sbjct: 308 VLIFVGYPGCGKSSLAQKL--AVEHGYGIVNRDTLK-----TWQKCVENAKILLKRQQNV 360
Query: 82 FLDRCNLEREQRTDFVKLG---GPEVD--VHAVVLDLPAKLCISRSVKRIEHEGNLQGGK 136
+D N +RE R ++ LG G ++ + L+ A C R + E E ++ G+
Sbjct: 361 IVDNTNADRESRKRYINLGKSFGADLRCFLFNCTLEQAAHNCKYRVIVDAE-EKQIEVGQ 419
Query: 137 AAAVVNRMLQKKELPKLSEGFSRIT 161
++N +K E PKLSEGFS I
Sbjct: 420 --MILNGYKKKFEEPKLSEGFSSIV 442
>gi|312378249|gb|EFR24879.1| hypothetical protein AND_10252 [Anopheles darlingi]
Length = 529
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 8/96 (8%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
+Q +++MVG PGSGKS F H + + + + +DT+ G+ +C+ S +AL++G
Sbjct: 410 EQEVIVMVGFPGSGKSHFARHQL--APHGYQLVNRDTL-----GSWQKCVASMEAALRQG 462
Query: 79 KSVFLDRCNLEREQRTDFVKLGG-PEVDVHAVVLDL 113
K V +D N + E R +V+ + V V+D+
Sbjct: 463 KRVVIDNTNPDVESRKRYVQAAARANIPVRCFVMDV 498
>gi|443723915|gb|ELU12134.1| hypothetical protein CAPTEDRAFT_157252 [Capitella teleta]
Length = 403
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 16/148 (10%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+VIMVG P SGKSTFC+ V + + IN+ GT+ +CL +A +A++ G S
Sbjct: 249 MVIMVGPPASGKSTFCKTVFKPHG-------YEIINRDTLGTQAKCLKAAKAAIENGNSC 301
Query: 82 FLDRCNLEREQRTDFVKLGG-PEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N + R D++ + E+ + P +L ++ R N G+A V
Sbjct: 302 VIDNTNPSPDVRADYIDIANEAEIPCRCFFMATPLELANHLNMTR----QNQTEGEARRV 357
Query: 141 ----VNRMLQKKELPKLSEGFSRITLCQ 164
N +K E P EGFS + +
Sbjct: 358 PDVGYNVYKKKFEEPSKDEGFSEVVRVE 385
>gi|357625554|gb|EHJ75956.1| polynucleotide kinase-3'-phosphatase [Danaus plexippus]
Length = 525
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
L+++VG PGSGKS + + + S + +C+D + GT +C + AS L++GKSV
Sbjct: 367 LLVLVGYPGSGKSFVAKLIEQKSGSRYVTVCRDVL-----GTWQKCASEASKLLQQGKSV 421
Query: 82 FLDRCNLEREQRTDFVKLG 100
+D N + E R+ + +
Sbjct: 422 IVDSTNPDTESRSRWTSIA 440
>gi|402831250|ref|ZP_10879940.1| zeta toxin [Capnocytophaga sp. CM59]
gi|402282689|gb|EJU31224.1| zeta toxin [Capnocytophaga sp. CM59]
Length = 312
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 12/122 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSG---------TKVQCLTSAS 72
L+I+VGAPGSGKSTF + +R+ W R+ +D + G ++ + AS
Sbjct: 13 LLILVGAPGSGKSTFARYFIRTEDN-WVRVNRDDFRLMQFGDTLMSPFYEERITKMVEAS 71
Query: 73 --SALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEG 130
+ LK +V +D N D + D+ V DL + + R KR E G
Sbjct: 72 VITLLKHHTNVIIDATNCSLRTLEDMIHAYTEYADISFKVFDLSVEELVKRCDKRCEQTG 131
Query: 131 NL 132
Sbjct: 132 KF 133
>gi|405974549|gb|EKC39184.1| Bifunctional polynucleotide phosphatase/kinase [Crassostrea gigas]
Length = 418
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q LVIMVG P SGKSTF ++ P I +N+ GT +CL L GK
Sbjct: 258 QELVIMVGCPASGKSTF----RKTYFEPHGYI---AVNRDTLGTAEKCLKVCKEQLSNGK 310
Query: 80 SVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKL 117
SV +D N + E R F++L + + V++ P +L
Sbjct: 311 SVVVDNTNPKVEARKSFIQLAQKQGIPCRCFVMNTPLEL 349
>gi|333920335|ref|YP_004493916.1| protein phosphatase [Amycolicicoccus subflavus DQS3-9A1]
gi|333482556|gb|AEF41116.1| Protein phosphatase [Amycolicicoccus subflavus DQS3-9A1]
Length = 838
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 32/186 (17%)
Query: 22 LVIMVGAPGSGKSTFCE------HVMRSSARPWARICQDTINKGKSGTKVQCLTS-ASSA 74
LV+M+G G+GK+TF ++ S A + D ++ + L A
Sbjct: 3 LVVMIGTSGAGKTTFAHRHFAATQILSSDAFR-GMVADDANDQSATAAAFDALHYIAGQR 61
Query: 75 LKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNL 132
L G+ +D N++R R V+L E DV A+VLD+P +CI+R+ +R + +
Sbjct: 62 LAAGRVTVIDATNVQRPARAQLVRLAR-EHDVLPVAIVLDVPESVCIARNEERPDRQ--- 117
Query: 133 QGGKAAAVVNRMLQKKELPKL-----SEGFSRITLCQNENDVQAAL--------DTYSGL 179
A VV+R Q +EL + EGF R+ + ++ A D +
Sbjct: 118 ---FGAHVVSR--QHRELRRSLKNLDREGFRRVHHLRTPAEISGAAFEVEPLLNDLRAHT 172
Query: 180 GPLDTL 185
GP D +
Sbjct: 173 GPFDVI 178
>gi|456387871|gb|EMF53361.1| calcineurin-like phosphoesterase [Streptomyces bottropensis ATCC
25435]
Length = 848
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 23/165 (13%)
Query: 22 LVIMVGAPGSGKSTFCEHVMR-----SSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKSTF + SS +C D ++G + L A L
Sbjct: 19 LVVLIGASGSGKSTFARRHFKPTEIISSDFCRGLVCDDENDQGATKDAFDVLHYIAGKRL 78
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
G+ +D ++++E R ++L +V A+VLD+P ++C R+ R +
Sbjct: 79 AAGRRTVVDATSVQQESRKQLIELARAHDVLPIAIVLDVPEEVCAERNAARTDR------ 132
Query: 135 GKAAAVVNRMLQK--KELPKL-----SEGFSRITLCQNENDVQAA 172
A + R++Q+ +EL + EGF ++ + + DV+ A
Sbjct: 133 ---ADMPRRVIQRHTRELRRSLRHLEREGFRKVHVLRGVEDVENA 174
>gi|358380845|gb|EHK18522.1| hypothetical protein TRIVIDRAFT_77188 [Trichoderma virens Gv29-8]
Length = 465
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 27/159 (16%)
Query: 15 EKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSA 74
E+K Q +V+ G PG+GKSTF ++ A + R+ QDT+ ++ +C+ +A
Sbjct: 301 ERKNDQDVVLFCGPPGAGKSTFYFKFLKPLA--YERVNQDTLK-----SRDKCIQAARDL 353
Query: 75 LKKGKSVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQ 133
LK+GKSV +D N + + R ++++ V + V P +C EH ++
Sbjct: 354 LKEGKSVAVDNTNPDPDTRALWIEVAKKAGVPIRCVWFSTPIVVC--------EHNDAVR 405
Query: 134 GGKAA-----------AVVNRMLQKKELPKLSEGFSRIT 161
A N + + PK EGF +T
Sbjct: 406 ANNATLNPEKREILPKLAFNGFASRFKEPKEKEGFQDVT 444
>gi|189196656|ref|XP_001934666.1| DNA kinase/phosphatase Pnk1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187980545|gb|EDU47171.1| DNA kinase/phosphatase Pnk1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 454
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ G PG+GKS+F ++ +AR+ QDT+ T+ +C+ +A++ L++G S
Sbjct: 288 IVLFCGCPGAGKSSFYWKHLQPFG--YARVNQDTLK-----TREKCVKAATAFLQEGTSA 340
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N + + R ++ L V + V+ P KLC R + G ++ +
Sbjct: 341 VIDNTNADPDTRAVWITLAQKLNVPIRCVLFTAPPKLCEHNDAFRALNIGPESNRESRTI 400
Query: 141 VNRM-----LQKKELPKLSEGFSRITLCQNE 166
+ + + PK +EGF+ I E
Sbjct: 401 LPHIAFSGFASRYREPKSAEGFADIITADFE 431
>gi|226359906|ref|YP_002777684.1| serine/threonine protein phosphatase PrpA [Rhodococcus opacus B4]
gi|226238391|dbj|BAH48739.1| serine/threonine protein phosphatase PrpA [Rhodococcus opacus B4]
Length = 845
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQ------CLTSASSAL 75
LV++VG GSGKS+F + + C+ + ++ L A + L
Sbjct: 11 LVVLVGVSGSGKSSFAAQHFAPTQVLSSDFCRGLVADDENDQSATSDAFDVLLYIAGTRL 70
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
++G +D N++RE R V L +V V A+V+D+P + I+R+ R + +
Sbjct: 71 RRGLLTVVDATNVQREARKALVDLAKSHDVLVDAIVIDVPDDVAIARNATRPDRDFGPH- 129
Query: 135 GKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAA 172
V+ R + ++ LPKL EGF R+ + + +A
Sbjct: 130 -----VIRRQHKDLRRSLPKLGREGFRRVHVLTGVEAIDSA 165
>gi|241349398|ref|XP_002408688.1| polynucleotide kinase 3' phosphatase, putative [Ixodes scapularis]
gi|215497377|gb|EEC06871.1| polynucleotide kinase 3' phosphatase, putative [Ixodes scapularis]
Length = 257
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 25/149 (16%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V++VG P SGK+ F + + A+ + I +DT+ G+ +C++ + +AL +SV
Sbjct: 99 VVVLVGYPASGKTHFAKKYL--VAKQYVHINRDTL-----GSWQKCVSESENALAHKRSV 151
Query: 82 FLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEH-----EGNLQGG 135
+D N + + R F +L D V+D S++R +H E L+G
Sbjct: 152 VIDNTNPDVDSRKRFTELARKYGCDCRCFVMDC--------SLERAKHNNEFREIKLKGE 203
Query: 136 KAAAVVNRML----QKKELPKLSEGFSRI 160
+V + +L K + P+LSEGFS I
Sbjct: 204 PHTSVTDMVLYSHRSKFKEPELSEGFSEI 232
>gi|353237575|emb|CCA69545.1| hypothetical protein PIIN_03484 [Piriformospora indica DSM 11827]
Length = 198
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 31 SGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSVFLDRCNLER 90
SGKSTF + + + + R+ QD + K +V+ LT + L +G SV +DR N+++
Sbjct: 35 SGKSTFAK-ALETHFPQFRRLNQDEL---KDRRRVERLTLQT--LSEGLSVIIDRTNIDQ 88
Query: 91 EQRTDFVKLGG--PEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVVNRMLQKK 148
+QR +V + V+ + ++ P + C +R R +H A V+ R +
Sbjct: 89 KQRKTWVDIADQFSRVEAWVITMNTPYEECAARLRTRTDHPTIKNWATAQVVLKRFSNEF 148
Query: 149 ELPKLSEGFSRI 160
E P EGF ++
Sbjct: 149 EEPSPMEGFDKM 160
>gi|398389370|ref|XP_003848146.1| hypothetical protein MYCGRDRAFT_77425 [Zymoseptoria tritici IPO323]
gi|339468020|gb|EGP83122.1| hypothetical protein MYCGRDRAFT_77425 [Zymoseptoria tritici IPO323]
Length = 448
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ G+PG+GKSTF M+ + R+ QD + T+ +CL A+ ++ KSV
Sbjct: 289 IVLFCGSPGAGKSTFYWQNMKPLG--YERVNQDILK-----TRDRCLKVATECIQDKKSV 341
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLC-ISRSVKRIEHEGN---LQGGKA 137
+D N + E R+ +++L A L +P +L + S K EH L G
Sbjct: 342 VVDNTNADIETRSAWLRL--------AAKLHVPCRLVHFTSSAKLCEHNDTVRALSNGLM 393
Query: 138 AAVVNRMLQKKELPKLSEGFSRITLCQNENDV 169
++L K + F R TL + D+
Sbjct: 394 NPENRQLLPKMAFTSFASRFRRPTLEEGFQDI 425
>gi|296410974|ref|XP_002835210.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295627985|emb|CAZ79331.1| unnamed protein product [Tuber melanosporum]
Length = 487
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 12/103 (11%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARP--WARICQDTINKGKSGTKVQCLTSASSALK 76
KQ +V+ VG PG+GKSTF R + P + R+ QDT+ TK +CL + S L+
Sbjct: 326 KQEIVLFVGPPGAGKSTF----YRRNLEPLGFERVNQDTLK-----TKDRCLKVSDSLLE 376
Query: 77 KGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLC 118
GKSV +D N + R ++ L +V + V P LC
Sbjct: 377 GGKSVTVDNTNPDVTTRAAWISLAKKHKVPIRCVHFIAPTDLC 419
>gi|427789125|gb|JAA60014.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 593
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 25/149 (16%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V++VG P SGKS F + + S + +A I +D + + +C+ AL++G+S
Sbjct: 435 VVVLVGYPASGKSHFAKEYLVS--KQYAHINRDMLKSAQ-----KCIEECEKALRRGQSA 487
Query: 82 FLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEH-----EGNLQGG 135
+D N + E R FV + + V+D +++R +H E L+G
Sbjct: 488 VIDNTNPDPESRKRFVDIARKHGCECRCFVMDC--------TLERAKHNNQFREIKLKGQ 539
Query: 136 KAAAVVNRML----QKKELPKLSEGFSRI 160
+V + +L K + P LSEGFS I
Sbjct: 540 PHVSVTDMVLYNHRSKFKEPSLSEGFSAI 568
>gi|194744219|ref|XP_001954592.1| GF16666 [Drosophila ananassae]
gi|190627629|gb|EDV43153.1| GF16666 [Drosophila ananassae]
Length = 522
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 23/147 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+VIMVG PGSGKS FCE +S R + + D + G CL + L G S
Sbjct: 366 MVIMVGLPGSGKSHFCESFFQS--RGYKIVSADAL-----GGVPACLKACERFLDAGNSC 418
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAK-LCISRSVKRIEH-------EGNLQ 133
+D N++ R F+ + A +P + L ++ S+ +H +L
Sbjct: 419 VVDNTNVDSASRKKFLSV--------AATFKIPCRCLVMNVSIAHAKHNIVFRELSDSLH 470
Query: 134 GGKAAAVVNRMLQKKELPKLSEGFSRI 160
V N + +K + P L EGF I
Sbjct: 471 SKINDMVFNMLKKKYQEPALDEGFITI 497
>gi|427778079|gb|JAA54491.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 619
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 25/149 (16%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V++VG P SGKS F + + S + +A I +D + KS K C+ AL++G+S
Sbjct: 461 VVVLVGYPASGKSHFAKEYLVS--KQYAHINRDML---KSAQK--CIEECEKALRRGQSA 513
Query: 82 FLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEH-----EGNLQGG 135
+D N + E R FV + + V+D +++R +H E L+G
Sbjct: 514 VIDNTNPDPESRKRFVDIARKHGCECRCFVMDC--------TLERAKHNNQFREIKLKGQ 565
Query: 136 KAAAVVNRML----QKKELPKLSEGFSRI 160
+V + +L K + P LSEGFS I
Sbjct: 566 PHVSVTDMVLYNHRSKFKEPSLSEGFSAI 594
>gi|291242189|ref|XP_002740992.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 414
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 24/154 (15%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q +++MVG P SGKSTF + + +N+ GT+ +C S +LK GK
Sbjct: 264 QEMIVMVGFPASGKSTFSRNYLVPHG-------YQVVNRDTLGTQSKCKKSCDESLKNGK 316
Query: 80 SVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQ-----G 134
SV +D N + R +++ + H V P + ++ + H NL
Sbjct: 317 SVIIDNTNPAKHVRQEYINIAKK----HGV----PIRCFWFQTSLPLAHHMNLYRQTQTN 368
Query: 135 GKAAAV----VNRMLQKKELPKLSEGFSRITLCQ 164
G V N + E P L EGFS + Q
Sbjct: 369 GDVRRVPDVGYNVFKKHFEEPDLEEGFSEMKEIQ 402
>gi|296138220|ref|YP_003645463.1| metallophosphoesterase [Tsukamurella paurometabola DSM 20162]
gi|296026354|gb|ADG77124.1| metallophosphoesterase [Tsukamurella paurometabola DSM 20162]
Length = 830
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
L+++VGA GSGKSTF R++ + +C+ D ++ + L L
Sbjct: 13 LILLVGASGSGKSTFAREHFRATEVVSSDVCRGLVADDENDQSATPDAFDLLHHLVGIRL 72
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
++G +D N++R R V+L +V V A+V DLP ++ + R+ +R + Q
Sbjct: 73 RRGLLTVVDATNVQRPARASLVQLARDHDVLVDAIVFDLPDEIAVERNRQRPDRNFGSQ- 131
Query: 135 GKAAAVVNRMLQKKELPK-----LSEGFSRITLCQNENDVQA 171
VV R Q +E+ K EGF R+ ++V A
Sbjct: 132 -----VVTR--QGREMRKSLRGIKKEGFRRVHTLHTPDEVAA 166
>gi|384253742|gb|EIE27216.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 351
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 104/255 (40%), Gaps = 25/255 (9%)
Query: 16 KKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSAL 75
K +Q ++++ G PGSGK+T + + W + QDT+ G++ C + +AL
Sbjct: 11 KTLRQRVILLAGLPGSGKTTVAGQL---QSLGWVWVNQDTL-----GSRRACEDALVAAL 62
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
G V +DRCN + QR+ F++L V A+ L P CI R+ R H L
Sbjct: 63 AAGLEVVVDRCNFDITQRSTFLQLARRFGAVVIALQLTTPVDECICRAKARPIHP-TLPR 121
Query: 135 GKAAAVVNRMLQKKELPKLSEGFSRITLCQNEND--------VQAALDTYSGLGPLDTLP 186
A V+ R + SEG + N+ + A+ T + P+
Sbjct: 122 ENTATVIERFARDFVGINPSEGIGEVYTAANQEEDTFRIGIFTSASSRTCETVVPMLERA 181
Query: 187 HGSFGQKNPDAKIQLGIMKFLKKVDAPSNTGSTASSTQDPVPPQITEEKNSCLEGQEITS 246
GS G+ P + I+ V AP + +T D V P N +
Sbjct: 182 AGSSGR--PLLAEKDFILTRSHTVGAPHSHVKGGGNTWDTVKP-----LNQWFKDLSRVF 234
Query: 247 LLSDAAGEEVKGTEN 261
L+ D A + V G EN
Sbjct: 235 LVDDDAYKAVLGEEN 249
>gi|212528386|ref|XP_002144350.1| DNA 3'-phosphatase Tpp1, putative [Talaromyces marneffei ATCC
18224]
gi|210073748|gb|EEA27835.1| DNA 3'-phosphatase Tpp1, putative [Talaromyces marneffei ATCC
18224]
Length = 414
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI G+PG+GKSTF ++ S + R+ QD + T+ +C+ A L G SV
Sbjct: 294 LVIFCGSPGAGKSTFYWKYLKPSG--YERVNQDILK-----TRQKCIKVAKDHLTAGHSV 346
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLC 118
+D N E R +V+L ++ + + P LC
Sbjct: 347 AVDNTNANTETRAYWVELAKEFQIPIRCIYFTSPPNLC 384
>gi|390957296|ref|YP_006421053.1| putative kinase [Terriglobus roseus DSM 18391]
gi|390412214|gb|AFL87718.1| putative kinase [Terriglobus roseus DSM 18391]
Length = 322
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWAR------ICQDTINKGKSGTKVQCLTSASSA- 74
+V+ +G PGSGK+T+ + R P + + D ++ SG L S A
Sbjct: 131 VVLAIGLPGSGKTTWYK---RRGVTPLSSDMLRTILFDDITDQRYSGLVFSTLRSLLRAR 187
Query: 75 -LKKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNL 132
+ K ++D NL +R ++K+ + AV D+P +C+ R+ KR
Sbjct: 188 LIAKMPWNYVDATNLSAHERRQWIKMAKSFGYEAQAVYFDVPFAVCMERNSKRERR---- 243
Query: 133 QGGKAAAVVNRMLQKKELPKLSEGFSRITLCQ 164
A V+ +M ++ P EGFS+IT+ +
Sbjct: 244 ---VADDVMQKMAERLRPPSFKEGFSKITVVR 272
>gi|291010004|ref|ZP_06567977.1| hypothetical protein SeryN2_36275 [Saccharopolyspora erythraea NRRL
2338]
Length = 151
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 14/153 (9%)
Query: 12 KDEEKKWKQI--LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLT 69
++ E W + LV+MVG G GK+T V R AR A + +D + + Q
Sbjct: 4 REAEHGWFAMPELVVMVGPQGCGKTT---RVERHLARTHAVVSKDHWPNARHREQRQ-QR 59
Query: 70 SASSALKKGKSVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEH 128
L +G+S+ +D N R V+L V V A+ D+P + C++R+ +R
Sbjct: 60 VVRELLSEGRSIVVDNTNPSTADRAPLVELAREYGVPVRAMYFDVPLETCLARNAER--- 116
Query: 129 EGNLQ-GGKAAAVVNRMLQKKELPKLSEGFSRI 160
+G + KA A R+L P +EGF+R+
Sbjct: 117 QGRARVPEKAVAATRRLLAP---PSTAEGFARV 146
>gi|410982394|ref|XP_003997542.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase [Felis
catus]
Length = 529
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GK+TF + + S+ + + +DT+ G+ +C+T+ +ALK+ K V
Sbjct: 375 VVVAVGFPGAGKTTFLQEHLVSAG--YVHVNRDTL-----GSWQRCVTTCETALKQRKRV 427
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRI-EHEGNLQGGKAAAV 140
+D N + R ++K + V A L +R R E G+ + V
Sbjct: 428 VIDNTNPDPPTRARYIKCAR-DAGVPCRCFLFGATLEQARHNNRFREMTGSSHAPVSDVV 486
Query: 141 VNRMLQKKELPKLSEGFSRITLCQNENDVQAALD 174
+ ++ E P L+EGFS I +V+ L+
Sbjct: 487 MFGYRKQFEAPTLAEGFSAILEIPFRLNVEPPLE 520
>gi|440637241|gb|ELR07160.1| hypothetical protein GMDG_08287 [Geomyces destructans 20631-21]
Length = 463
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 69/150 (46%), Gaps = 18/150 (12%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
+Q +V+ VG+PGSGK+TF +R + RI QD + T+ +CLT A + L++G
Sbjct: 304 EQEIVLFVGSPGSGKTTFY---LRHLNPAYTRINQDRLK-----TRDKCLTVARTRLEEG 355
Query: 79 KSVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKR-IEHEGNLQGGK 136
SV +D N + R +V L V++ V +C V R + E N +
Sbjct: 356 VSVVIDNTNPDEATRKYWVDLAREFGVEIRCVHFVTEGGVCRHNDVVRALNREMNPEKRT 415
Query: 137 -----AAAVVNRMLQKKELPKLSEGFSRIT 161
A A N K P L EGF IT
Sbjct: 416 ILPNIAFASFN---SKYGPPSLQEGFKEIT 442
>gi|315056521|ref|XP_003177635.1| bifunctional polynucleotide phosphatase/kinase [Arthroderma gypseum
CBS 118893]
gi|311339481|gb|EFQ98683.1| bifunctional polynucleotide phosphatase/kinase [Arthroderma gypseum
CBS 118893]
Length = 474
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LV++ G+PGSGKSTF ++ + R+ QD + T+ +CL A+ L GKSV
Sbjct: 314 LVLLCGSPGSGKSTFYWKYLQPLG--YERVNQDILK-----TRQKCLKVANENLLAGKSV 366
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N + R +++ L + + + L P +C + R + +
Sbjct: 367 AVDNTNANKTTRAEWISLAKTLNLPIRCIYLTTPIPVCKHNNAVRAANPNQESLNPESRT 426
Query: 141 V------NRMLQKKELPKLSEGF 157
+ + +++ E P +SEGF
Sbjct: 427 ILPPVAFSDYVRRFEEPDVSEGF 449
>gi|332669714|ref|YP_004452722.1| metallophosphoesterase [Cellulomonas fimi ATCC 484]
gi|332338752|gb|AEE45335.1| metallophosphoesterase [Cellulomonas fimi ATCC 484]
Length = 861
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 16/162 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVM-----RSSARPWARICQDTINKGKSGTKVQCLTSASSA-L 75
LV++VGA GSGKSTF SS + D ++G + + L + A L
Sbjct: 11 LVVLVGASGSGKSTFAARAFGPFETLSSDFFRGLVSNDPNDQGATTAAFEALHHVAGARL 70
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
G +D N++ R V+L +V A+VLDLP +C++R+ R + +
Sbjct: 71 DAGLLTVVDATNVQATARRSLVELARAHDVLPVAIVLDLPEDVCVARNAARTDRD----- 125
Query: 135 GKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAAL 173
A VV R ++ L L+ EGF + + ++ +V AA+
Sbjct: 126 -FGAHVVTRQRDQLRRSLRGLAREGFRTVHVLRSVEEVDAAV 166
>gi|440803380|gb|ELR24286.1| DNA 3'phosphatase [Acanthamoeba castellanii str. Neff]
Length = 472
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Query: 20 QILVIMVG-APG---SGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSAL 75
Q +VI VG AP SGKSTF + + + I QDT++ TK CL + AL
Sbjct: 314 QEMVICVGTAPAQEQSGKSTFTKRNLVPQG--YVHINQDTLH-----TKSACLQATEKAL 366
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
+GKSV +D N R ++ + V V P +L +V R N+ G
Sbjct: 367 AQGKSVVIDNTNPSDSARALYINIAKERGVPVRCFTFKTPIELAQHLNVYR----ENMSG 422
Query: 135 GK-AAAVVNRMLQKKEL-PKLSEGFSRI 160
K + M +K+ + P+L+EGF+ I
Sbjct: 423 VKRVPGIAYNMFKKQYVEPRLAEGFTEI 450
>gi|333371472|ref|ZP_08463422.1| serine/threonine protein phosphatase 1 [Desmospora sp. 8437]
gi|332976146|gb|EGK13014.1| serine/threonine protein phosphatase 1 [Desmospora sp. 8437]
Length = 178
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMR-----SSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
L++M APG GKSTF R SS R +C + N + A +
Sbjct: 12 LILMCAAPGCGKSTFANRHFRSTEVVSSDRCREMVCDEVENMSVHKEAFSLVRHIARLRM 71
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKR 125
G+ +D L R+ R+DF +L P + ++LDLP K C+ ++ +R
Sbjct: 72 SLGRLTVIDATFLTRKSRSDFRRLAAPYRFNTGVILLDLPLKTCLEQNKRR 122
>gi|221482828|gb|EEE21159.1| polynucleotide kinase-3''''-phosphatase, putative [Toxoplasma
gondii GT1]
Length = 697
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 11/99 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI++GAPGSGKST E V + + I QD + T+ +C+ + AL + ++V
Sbjct: 509 LVILIGAPGSGKSTLTETVFKD----YTCIRQDDLK-----TQAKCVKACEKALTEKRNV 559
Query: 82 FLDRCNLEREQRTDFVKLGGP--EVDVHAVVLDLPAKLC 118
+D N + R ++KLG + VVL P ++C
Sbjct: 560 VIDMQNATCKTREPYIKLGKALGTHRIRCVVLKWPEEMC 598
>gi|237840635|ref|XP_002369615.1| polynucleotide kinase-3'-phosphatase, putative [Toxoplasma gondii
ME49]
gi|211967279|gb|EEB02475.1| polynucleotide kinase-3'-phosphatase, putative [Toxoplasma gondii
ME49]
gi|221503379|gb|EEE29077.1| polynucleotide kinase-3 phosphatase domain-containing protein
[Toxoplasma gondii VEG]
Length = 697
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 11/99 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI++GAPGSGKST E V + + I QD + T+ +C+ + AL + ++V
Sbjct: 509 LVILIGAPGSGKSTLTETVFKD----YTCIRQDDLK-----TQAKCVKACEKALSEKRNV 559
Query: 82 FLDRCNLEREQRTDFVKLGGP--EVDVHAVVLDLPAKLC 118
+D N + R ++KLG + VVL P ++C
Sbjct: 560 VIDMQNATCKTREPYIKLGKALGTHRIRCVVLKWPEEMC 598
>gi|284030585|ref|YP_003380516.1| metallophosphoesterase [Kribbella flavida DSM 17836]
gi|283809878|gb|ADB31717.1| metallophosphoesterase [Kribbella flavida DSM 17836]
Length = 843
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 14/159 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTI---NKGKSGTK---VQCLTSASSAL 75
LV++VGA GSGKSTF R + + C+ + ++ TK A++ L
Sbjct: 11 LVVLVGASGSGKSTFARTHFRGTEVISSDFCRGLVADDENDQAATKDAFAVLHFIAATRL 70
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D N++ E R + + L E DV A+VLD P ++C+ R+ E + Q
Sbjct: 71 AAGRLTVIDATNVQPEARRELIAL-AREHDVLPVAIVLDPPERVCVERN----EQRADRQ 125
Query: 134 GGKAAAVVNRMLQKKELPKLS-EGFSRITLCQNENDVQA 171
G V R ++ L L EGF + + + A
Sbjct: 126 FGAKVVVRQRSQLRRGLKSLKREGFRGVHVLSTVEQIDA 164
>gi|358458640|ref|ZP_09168848.1| Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) [Frankia sp. CN3]
gi|357078163|gb|EHI87614.1| Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) [Frankia sp. CN3]
Length = 454
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 26/183 (14%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTI---NKGKSGTKVQCLTS---ASSAL 75
LV++VG GSGKS F R + + C+ + + +S T+ + L
Sbjct: 16 LVVLVGIAGSGKSAFAARHFRPAQVVSSDACRAMVADDERDQSATQAAFEVAHLVIRHRL 75
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAV--VLDLPAKLCISRSVKRIEHEGNLQ 133
+G +D N+E R ++L E DV AV VLDLP +LC+ R+ +R
Sbjct: 76 ARGLLTVVDATNVEPAARRPLLELAA-EYDVPAVAVVLDLPEQLCVRRAGERASRP---- 130
Query: 134 GGKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQA--------ALDTYSGLGPL 182
AA VV R + +P L+ +GF+ + + ++ +V A A+D GP
Sbjct: 131 --VAAGVVRRQYAQLRAGVPTLAGDGFAAVHVLRSAAEVDAATVATRRSAVDRRDEHGPF 188
Query: 183 DTL 185
D +
Sbjct: 189 DVI 191
>gi|296826884|ref|XP_002851045.1| polynucleotide kinase [Arthroderma otae CBS 113480]
gi|238838599|gb|EEQ28261.1| polynucleotide kinase [Arthroderma otae CBS 113480]
Length = 478
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+VI+ G+PGSGKSTF ++ + R+ QD + T+ +CL A+ L GKSV
Sbjct: 318 MVILCGSPGSGKSTFYWKYLQPLG--YERVNQDILK-----TRQKCLKVANEHLLAGKSV 370
Query: 82 FLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N + R++++ L + + + L P +C + R + +
Sbjct: 371 AVDNTNANKATRSEWISLAKTHNIPIICIYLTTPITVCKHNNAVRAANPNQESLNPESRT 430
Query: 141 V------NRMLQKKELPKLSEGF 157
+ +++ E P +SEGF
Sbjct: 431 MLPPIAFGDFVRRFEEPDVSEGF 453
>gi|344269996|ref|XP_003406832.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase
[Loxodonta africana]
Length = 521
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+T+ ++LK+ K V
Sbjct: 367 VVVAVGFPGAGKSTFLKRHLVSAG--YVHVNRDTL-----GSWQRCVTTCEASLKQKKRV 419
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRI-EHEGNLQGGKAAAV 140
+D N + R ++K + V A L +R R E G+ V
Sbjct: 420 VIDNTNPDAPSRARYIKCAQ-DAGVPCRCFLFTATLEQARHNNRFREMTGSPHALVTDMV 478
Query: 141 VNRMLQKKELPKLSEGFSRI 160
+ ++ E P L+EGFS++
Sbjct: 479 MYSYRKQFEAPTLAEGFSQV 498
>gi|326469818|gb|EGD93827.1| polynucleotide kinase [Trichophyton tonsurans CBS 112818]
Length = 460
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 22/150 (14%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LV++ G+PGSGKSTF ++ + R+ QD + T+ +CL A+ L GKSV
Sbjct: 300 LVLLCGSPGSGKSTFYWKHLQPLG--YERVNQDILK-----TRQKCLKVANENLLVGKSV 352
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRI----------EHEG 130
+D N + R +++ L + + + L P +C R E
Sbjct: 353 AVDNTNANKATRAEWISLAKSLNLPIRCIYLSTPISVCKHNDAVRAANLTQESLNPESRT 412
Query: 131 NLQGGKAAAVVNRMLQKKELPKLSEGFSRI 160
L G + R E P +SEGF +
Sbjct: 413 KLPGMAFSEYARRF----EEPDISEGFKDV 438
>gi|355712478|gb|AES04360.1| polynucleotide kinase 3'-phosphatase [Mustela putorius furo]
Length = 322
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+T +ALK+ K V
Sbjct: 168 VVVAVGFPGAGKSTFLQEHLVSAG--YVHVNRDTL-----GSWQRCVTLCENALKQRKRV 220
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRI-EHEGNLQGGKAAAV 140
+D N + R ++K + V A L +R R E G+ + V
Sbjct: 221 VIDNTNPDPLSRARYIKCAQ-DAGVPCRCFLFTATLEQARHNNRFREMTGSSHAPVSDVV 279
Query: 141 VNRMLQKKELPKLSEGFSRITLCQNENDVQAALD 174
+ ++ E P L+EGFS I +V+ L+
Sbjct: 280 MYGYRKQFEAPTLAEGFSAILEIPFRLNVEPTLE 313
>gi|442762141|gb|JAA73229.1| Putative polynucleotide kinase 3' phosphatase, partial [Ixodes
ricinus]
Length = 552
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 25/149 (16%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V++VG P SGK+ F + + A+ + I +DT+ G+ +C++ + +AL +SV
Sbjct: 394 VVVLVGYPASGKTHFAKKYL--VAKQYVHINRDTL-----GSWQKCVSESENALAHKRSV 446
Query: 82 FLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQ----GGK 136
+D N + + R F +L + V+D S++R +H + G+
Sbjct: 447 VIDNTNPDVDSRKRFTELARKYGCECRCFVMDC--------SLERAKHNNEFREIKLKGE 498
Query: 137 AAAVVNRML-----QKKELPKLSEGFSRI 160
A VN M+ K + P+LSEGFS I
Sbjct: 499 PHASVNDMVLYSHRSKFKEPELSEGFSEI 527
>gi|219911527|emb|CAX11689.1| polynucleotide kinase-3'-phosphatase [Nilaparvata lugens]
Length = 570
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+MVG+PGSGKS F + + ++ + +DT+ G+ +C++S SAL G SV
Sbjct: 414 VVVMVGSPGSGKSFFANSYLVKAG--YSCVNRDTL-----GSWQKCVSSMESALHAGNSV 466
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEH-EGNLQGGKAAAV 140
+D N ++E R ++ + ++++ + L +R + G+ +
Sbjct: 467 VVDNTNPDQETRKRYIDVAA-KLNISCRCFLMSTTLEHARRNNKFRQLVGDPHVPVNTII 525
Query: 141 VNRMLQKKELPKLSEGFSRIT 161
+N +K P L EGFS I
Sbjct: 526 INSYGKKFVPPMLKEGFSDIV 546
>gi|281205023|gb|EFA79217.1| hypothetical protein PPL_08045 [Polysphondylium pallidum PN500]
Length = 487
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 20/203 (9%)
Query: 272 SSSDVPTLAFPSLSTSDFQFNNEKASDVIIEKVE---EFVNKLGNARLVL-VDLTQGSKI 327
SS+ +L FP +ST + F + A+D+ I +++ EF + + +L++ +D + I
Sbjct: 288 SSNKQRSLYFPFISTFVYNFKVDIATDIAITEIKSYLEFHKEEDDIKLIMCIDKS----I 343
Query: 328 LSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFS 387
+ A K + ++F D + C +A+ WRLK N ++
Sbjct: 344 YNDSIATKLTKGVGDERFSIVQCDSATSVEQFNVGCRFVASETTWRLKRTPQ--NKQLYD 401
Query: 388 AAGPALEVATAERAKSLYP-----GNSVIVPLPSTSPLCGRE-GVTHVIHVLGPNMNPRR 441
G A A K YP GN VP+ +E + + +GPNMN ++
Sbjct: 402 IIGEATFDA---EVKQRYPKPGTAGNIYAVPIKDQQSKAAKEFNIDAIFLTIGPNMNDKK 458
Query: 442 PNCLDGDYVKGCEILRKAYTSLF 464
N ++ D +L + Y SLF
Sbjct: 459 SNYIE-DIDDATPLLTQTYQSLF 480
>gi|431920745|gb|ELK18518.1| Bifunctional polynucleotide phosphatase/kinase [Pteropus alecto]
Length = 523
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + ++ + + +DT+ G+ +C+++ +AL++ K V
Sbjct: 369 VVVAVGFPGAGKSTFLQQYLVAAG--YVHVNRDTL-----GSWQRCVSTCEAALRQSKRV 421
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISR-SVKRIEHEGNLQGGKAAAV 140
+D N + R ++K + V A L +R +++ E G+ + V
Sbjct: 422 AIDNTNPDAASRARYIKCAQ-DAGVPCRCFLFSATLEQARHNIRFREMTGSSHAPVSDVV 480
Query: 141 VNRMLQKKELPKLSEGFSRI 160
+ ++ E P L+EGFS I
Sbjct: 481 IYGYRKQFEAPTLAEGFSAI 500
>gi|357380820|pdb|3ZVN|A Chain A, The Structural Basis For Substrate Recognition By
Mammalian Polynucleotide Kinase 3' Phosphatase
Length = 416
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C++S +AL++GK V
Sbjct: 260 VVVAVGFPGAGKSTFIQEHLVSAG--YVHVNRDTL-----GSWQRCVSSCQAALRQGKRV 312
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +++ + V + A + +R R + + +V
Sbjct: 313 VIDNTNPDVPSRARYIQCAK-DAGVPCRCFNFXATIEQARHNNRFREMTDPSHAPVSDMV 371
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGF I
Sbjct: 372 MFSYRKQFEPPTLAEGFLEI 391
>gi|357380815|pdb|3ZVL|A Chain A, The Structural Basis For Substrate Recognition By
Mammalian Polynucleotide Kinase 3' Phosphatase
Length = 416
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C++S +AL++GK V
Sbjct: 260 VVVAVGFPGAGKSTFIQEHLVSAG--YVHVNRDTL-----GSWQRCVSSCQAALRQGKRV 312
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +++ + V + A + +R R + + +V
Sbjct: 313 VIDNTNPDVPSRARYIQCAK-DAGVPCRCFNFXATIEQARHNNRFREMTDPSHAPVSDMV 371
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGF I
Sbjct: 372 MFSYRKQFEPPTLAEGFLEI 391
>gi|119188007|ref|XP_001244610.1| hypothetical protein CIMG_04051 [Coccidioides immitis RS]
Length = 442
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q LVI G+PG+GKSTF + + R+ QD + T+ +CL+ A+ L+ G
Sbjct: 273 QELVIFCGSPGAGKSTFFWKYLEPLK--YKRVNQDILK-----TRPKCLSVAAEYLQAGD 325
Query: 80 SVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKR------IEHEG-- 130
SV +D E R +VKL +V + V L PA +C + R +E G
Sbjct: 326 SVAVD-----PETRAYWVKLAKEHDVPIRCVYLSTPASICAHNNAVRAANPRLVEKSGLT 380
Query: 131 ------NLQGGKAAAVVNRMLQ----KKELPKLSEGFSRI 160
+L K + + + + E P+LSEGF I
Sbjct: 381 PPLPQESLNPEKRTFLPDVAFRSFASRFEKPQLSEGFEDI 420
>gi|401885761|gb|EJT49849.1| hypothetical protein A1Q1_01001 [Trichosporon asahii var. asahii
CBS 2479]
gi|406695553|gb|EKC98856.1| hypothetical protein A1Q2_06827 [Trichosporon asahii var. asahii
CBS 8904]
Length = 419
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
K+ L++ VG P SGK++F + +N+ K G + +C+ +A AL+ G
Sbjct: 268 KKELIVFVGPPASGKTSFYRRYFPK---------YEHVNQDKLGNRDRCMKAAREALQAG 318
Query: 79 KSVFLDRCNLEREQRTDFVKLG 100
+SV +D N +R+ R +V L
Sbjct: 319 RSVVVDNTNRDRKTRKLYVDLA 340
>gi|221057498|ref|XP_002261257.1| polynucleotide kinase [Plasmodium knowlesi strain H]
gi|194247262|emb|CAQ40662.1| polynucleotide kinase, putative [Plasmodium knowlesi strain H]
Length = 504
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
+Q LV+++G PG GK++ C+ + +A +IN + TK + + + ++ G
Sbjct: 341 EQYLVLLIGPPGCGKTSICK-------KYFADFV--SINLEELSTKNKRIDTIRQSITSG 391
Query: 79 KSVFLDRCNLEREQRTDFV---KLGGPEVDVHAVVLDLPAKLCIS-RSVKRIEHEGNLQG 134
K+V +D N+ + R ++ K + V A+ +L + K I E N+
Sbjct: 392 KNVVMDNANIYVKNRLIYISEAKKINANLKVSAIFFQYSKELVFHLNNFKMITDEENIMH 451
Query: 135 GKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAAL 173
++ + E+P SE F R+ +E+ V + L
Sbjct: 452 EVPTIAIHSFYKYVEVPSESENFDRVVTLHDEHFVPSDL 490
>gi|318059293|ref|ZP_07978016.1| calcineurin-like phosphoesterase [Streptomyces sp. SA3_actG]
gi|318078487|ref|ZP_07985819.1| calcineurin-like phosphoesterase [Streptomyces sp. SA3_actF]
Length = 843
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKSTF + + + C+ D ++ S + L A L
Sbjct: 6 LVVLIGATGSGKSTFAARHFKPTEVLSSDFCRGLVADDQNDQSASRDAFEVLHHIAGKRL 65
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D +++RE R + L E DV A+VLD+P ++C R+ R + G
Sbjct: 66 AAGRLTVVDATSVQRESRKQLIDL-AREYDVLPVAIVLDVPEEVCAERNAGREDRAG--- 121
Query: 134 GGKAAAVVNRMLQK--KELPKL-----SEGFSRITLCQNENDVQAA 172
V R++Q+ +EL + EGF ++ + + +V AA
Sbjct: 122 ------VPRRVIQRHQRELRRSLRGLEREGFRKVHVLKGVAEVGAA 161
>gi|167536479|ref|XP_001749911.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771626|gb|EDQ85290.1| predicted protein [Monosiga brevicollis MX1]
Length = 400
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 7/142 (4%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q +++MVG P SGKST +H IN+ + GT +C +A++AL G+
Sbjct: 242 QEMIVMVGCPASGKSTLSKHKFEKEH------GYTRINRDEMGTASKCSKAAAAALAAGQ 295
Query: 80 SVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAA 138
SV +D N R++++KL +V ++++ P L ++ R Q A
Sbjct: 296 SVVIDNTNGSPAARSEWIKLAQKHKVPCRCILMETPRDLAEHMNLFRQNTTQGRQRRVPA 355
Query: 139 AVVNRMLQKKELPKLSEGFSRI 160
N + + P +EGF+ +
Sbjct: 356 VGYNVFFKNYQEPTSAEGFASV 377
>gi|341882503|gb|EGT38438.1| hypothetical protein CAEBREN_24374 [Caenorhabditis brenneri]
Length = 362
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
KQ +++MVG PGSGKSTF + M + + + +DT+ GT +C+ + S LK G
Sbjct: 204 KQEMIVMVGFPGSGKSTFAK--MMAEEYGYKIVNRDTV-----GTWQKCVAATRSHLKNG 256
Query: 79 KSVFLDRCNLEREQRTDFVKLG 100
SV +D + + E R ++++
Sbjct: 257 DSVVIDNTSPDVESRGRYIEVA 278
>gi|73947014|ref|XP_541488.2| PREDICTED: bifunctional polynucleotide phosphatase/kinase isoform 1
[Canis lupus familiaris]
Length = 521
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+T+ +ALK+ K V
Sbjct: 367 VVVAVGFPGAGKSTFLQEHLVSAG--YVHVNRDTL-----GSWQRCVTTCENALKQRKRV 419
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRI-EHEGNLQGGKAAAV 140
+D N + R ++K + V L +R R E G+ + V
Sbjct: 420 VIDNTNPDPPTRARYIKCAR-DAGVPCRCFLFSTTLEHARHNNRFREMTGSSHAPVSDVV 478
Query: 141 VNRMLQKKELPKLSEGFSRI 160
+ ++ E P L+EGFS I
Sbjct: 479 MYGYRKQFEAPTLAEGFSAI 498
>gi|71023617|ref|XP_762038.1| hypothetical protein UM05891.1 [Ustilago maydis 521]
gi|46101603|gb|EAK86836.1| hypothetical protein UM05891.1 [Ustilago maydis 521]
Length = 337
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 33/162 (20%)
Query: 19 KQILVIMVGAPGSGKSTF----CEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSA 74
+Q LV++ G GSGKSTF C+H W R QD + G + + +A +A
Sbjct: 56 EQYLVVLSGLIGSGKSTFARALCQHYPD-----WRRCNQDEL-----GDRHAVVYAARTA 105
Query: 75 LKKGKSVFLDRCNLEREQRTDFVKLG-----------GPEVD--VHAVVLDLPAKLCISR 121
L G +V +DR N++ +QR +++L PE + ++ + L IS
Sbjct: 106 LLAGHNVVIDRTNIDAKQRRTWLELAQELCAPPSSDEAPEASSTLPRKIITISLTLTIST 165
Query: 122 SVK------RIEHEGNLQGGKAAAVVNRMLQKKELPKLSEGF 157
V R++HE +A ++ L+ + + EGF
Sbjct: 166 VVAQERLQVRVDHETIKTAQEALRILPHFLRTYQKATVEEGF 207
>gi|330925672|ref|XP_003301142.1| hypothetical protein PTT_12577 [Pyrenophora teres f. teres 0-1]
gi|311324342|gb|EFQ90752.1| hypothetical protein PTT_12577 [Pyrenophora teres f. teres 0-1]
Length = 446
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ G PG+GKS+F ++ +AR+ QDT+ T+ +C+ +A++ L++G S
Sbjct: 287 IVLFCGCPGAGKSSFYWKHLQPLG--YARVNQDTLK-----TREKCVKAATAFLQEGTSA 339
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLC 118
+D N + + R ++ L V + V+ P KLC
Sbjct: 340 VIDNTNADPDTRAVWITLAHKLNVPIRCVLFTAPPKLC 377
>gi|302522465|ref|ZP_07274807.1| serine/threonine protein phosphatase [Streptomyces sp. SPB78]
gi|302431360|gb|EFL03176.1| serine/threonine protein phosphatase [Streptomyces sp. SPB78]
Length = 872
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKSTF + + + C+ D ++ S + L A L
Sbjct: 35 LVVLIGATGSGKSTFAARHFKPTEVLSSDFCRGLVADDQNDQSASRDAFEVLHHIAGKRL 94
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D +++RE R + L E DV A+VLD+P ++C R+ R + G
Sbjct: 95 AAGRLTVVDATSVQRESRKQLIDL-AREYDVLPVAIVLDVPEEVCAERNAGREDRAG--- 150
Query: 134 GGKAAAVVNRMLQK--KELPKL-----SEGFSRITLCQNENDVQAA 172
V R++Q+ +EL + EGF ++ + + +V AA
Sbjct: 151 ------VPRRVIQRHQRELRRSLRGLEREGFRKVHVLKGVAEVGAA 190
>gi|453051327|gb|EME98836.1| putative serine/threonine protein phosphatase [Streptomyces
mobaraensis NBRC 13819 = DSM 40847]
Length = 907
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV++VGA GSGKSTF + + C+ DT ++ + L A L
Sbjct: 25 LVVLVGATGSGKSTFAARHFAPTETLSSDTCRGLVSDDTNDQAATPDAFDVLHYIAGKRL 84
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D N++ E R V+L E DV A+VLD+P ++C +R+ R +
Sbjct: 85 AAGRLTVVDATNVQPEARKHLVRLAR-EHDVLPVAIVLDVPEEVCAARNATRPDR----- 138
Query: 134 GGKAAAVVNRMLQK--KELPKL-----SEGFSRITLCQNENDVQAA 172
AA+ R++Q+ +EL + EGF ++ + + V+ A
Sbjct: 139 ----AALPRRVIQRHQRELRRSLRHLEREGFRKVHVLRGAGQVETA 180
>gi|225872301|ref|YP_002753756.1| polynucleotide kinase domain-containing protein [Acidobacterium
capsulatum ATCC 51196]
gi|225793642|gb|ACO33732.1| polynucleotide kinase domain protein [Acidobacterium capsulatum
ATCC 51196]
Length = 257
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 21 ILVIMVGAPGSGKSTFCEHVMRSSARPWAR------ICQDTINKGKSGTKVQCLTSASSA 74
+V+ +G PGSGK+T+ + R +P + + D + G L S A
Sbjct: 89 FVVLAIGLPGSGKTTWFK---RRGVQPLSSDMLRTILFDDITEQRYQGLVFSTLRSLLRA 145
Query: 75 --LKKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGN 131
+ K ++D NL +R ++K+ +V AV D+P ++C+ R+ +R E N
Sbjct: 146 RLIAKMPWNYVDATNLSPHERRQWIKMAKSFGYEVQAVFFDVPLQVCLERNSRR-ERVVN 204
Query: 132 LQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQ 164
+ V+++M ++ P EGF++IT+ +
Sbjct: 205 DE------VMHKMAERLRPPSFKEGFTKITVVR 231
>gi|134101523|ref|YP_001107184.1| hypothetical protein SACE_4995 [Saccharopolyspora erythraea NRRL
2338]
gi|133914146|emb|CAM04259.1| hypothetical protein SACE_4995 [Saccharopolyspora erythraea NRRL
2338]
Length = 139
Score = 49.7 bits (117), Expect = 0.005, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LV+MVG G GK+T V R AR A + +D + + Q L +G+S+
Sbjct: 4 LVVMVGPQGCGKTT---RVERHLARTHAVVSKDHWPNARHREQRQ-QRVVRELLSEGRSI 59
Query: 82 FLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQ-GGKAAA 139
+D N R V+L V V A+ D+P + C++R+ +R +G + KA A
Sbjct: 60 VVDNTNPSTADRAPLVELAREYGVPVRAMYFDVPLETCLARNAER---QGRARVPEKAVA 116
Query: 140 VVNRMLQKKELPKLSEGFSRI 160
R+L P +EGF+R+
Sbjct: 117 ATRRLLAP---PSTAEGFARV 134
>gi|320164217|gb|EFW41116.1| polynucleotide kinase-3'-phosphatase [Capsaspora owczarzaki ATCC
30864]
Length = 648
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
KQ L++M G P SGKSTF + + + I +DT+ GT +C+ + AL+ G
Sbjct: 490 KQELIVMTGFPASGKSTFVRQKLVPAG--YVHINRDTL-----GTWQKCVAATRDALRAG 542
Query: 79 KSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCI 119
KSV +D + + E R +V A L +PA+ +
Sbjct: 543 KSVVVDNTSPDTESRGRYV--------AEAKALGIPARAFV 575
>gi|205363941|gb|ACI04470.1| putative kinase-like protein [uncultured bacterium RM57]
Length = 301
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 19/152 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWAR------ICQDTINKGKSGTKVQCLTSASSA- 74
+V+ +G PGSGK+T+ + R P + + D ++ G L S A
Sbjct: 120 VVLTIGLPGSGKTTWYK---RRGVTPLSSEMLRTILFDDITDQRYQGLVFSTLRSLLRAR 176
Query: 75 -LKKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNL 132
+ K ++D NL +R ++K+ +V AV D+P +C+ R+ +R +
Sbjct: 177 LIAKMPWNYVDATNLSPHERRQWIKMAKSFGYEVQAVFFDVPLSVCLERNARRDRQVSD- 235
Query: 133 QGGKAAAVVNRMLQKKELPKLSEGFSRITLCQ 164
V+ RM ++ P EGF +IT+ +
Sbjct: 236 ------EVMQRMAERLRPPAFKEGFDKITVVR 261
>gi|361131893|pdb|3U7E|B Chain B, Crystal Structure Of Mpnkp Catalytic Fragment (D170a)
gi|361131894|pdb|3U7F|B Chain B, Crystal Structure Of Mpnkp Catalytic Fragment (D170a)
Bound To Single- Stranded Dna (Tcctcp)
gi|361131898|pdb|3U7H|B Chain B, Crystal Structure Of Mpnkp Catalytic Fragment (D170a)
Bound To Single- Stranded Dna (Tccttp)
Length = 381
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C++S +AL++GK V
Sbjct: 225 VVVAVGFPGAGKSTFIQEHLVSAG--YVHVNRDTL-----GSWQRCVSSCQAALRQGKRV 277
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +++ + V + A + +R R + + V
Sbjct: 278 VIDNTNPDVPSRARYIQCAK-DAGVPCRCFNFXATIEQARHNNRFREXTDPSHAPVSDXV 336
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGF I
Sbjct: 337 XFSYRKQFEPPTLAEGFLEI 356
>gi|320106580|ref|YP_004182170.1| polynucleotide kinase domain-containing protein [Terriglobus
saanensis SP1PR4]
gi|319925101|gb|ADV82176.1| polynucleotide kinase domain protein [Terriglobus saanensis SP1PR4]
Length = 258
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 19/155 (12%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWAR------ICQDTINKGKSGTKVQCLTSAS 72
K +V+ +G PGSGK+T+ + R +P + + D ++ SG L S
Sbjct: 89 KGYVVLTIGLPGSGKTTWYK---RRGVQPLSSDMLRTILFDDITDQRYSGLVFSTLRSLL 145
Query: 73 SA--LKKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHE 129
A + K ++D NL +R ++K+ + AV D+P ++C+ R+ KR
Sbjct: 146 RARLIAKMPWNYVDATNLSAHERRQWIKMAQSFGYEAQAVFFDVPFEICMERNSKRDRVV 205
Query: 130 GNLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQ 164
+ V+++M ++ + P EGF++IT+ +
Sbjct: 206 TD-------DVMHKMAERLKPPTFQEGFAKITVVR 233
>gi|440473127|gb|ELQ41948.1| bifunctional polynucleotide phosphatase/kinase [Magnaporthe oryzae
Y34]
gi|440479584|gb|ELQ60342.1| bifunctional polynucleotide phosphatase/kinase [Magnaporthe oryzae
P131]
Length = 538
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 10/131 (7%)
Query: 4 DIDDTCKAKDEEKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGT 63
D D KA E+K K I ++ G PG+GKSTF ++ + R+ QDT+ T
Sbjct: 305 DADGEPKALIEQKNEKDI-ILFCGPPGAGKSTFYWKYLKPLG--YGRVNQDTLK-----T 356
Query: 64 KVQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRS 122
K +CL++A+ LK SV +D N + + R +V L ++ + V P L
Sbjct: 357 KEKCLSAAAEMLKDKVSVVIDNTNPDPDTRALWVALAKKHDIPIRCVWFKTPLALAQHND 416
Query: 123 VKRIEHEGNLQ 133
R G LQ
Sbjct: 417 AVR-SMNGTLQ 426
>gi|162451005|ref|YP_001613372.1| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [Sorangium
cellulosum So ce56]
gi|161161587|emb|CAN92892.1| Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [Sorangium
cellulosum So ce56]
Length = 855
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 24/190 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMR-----SSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV++VGA GSGKSTF + SS + D ++ S + L A L
Sbjct: 14 LVVLVGASGSGKSTFARAHFKPTEILSSDHYRGVVSDDENDQAASAAAFEVLHFIAGKRL 73
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
G+ +D N++ + R V L V A+VLD+P KLC +R+ R + + G
Sbjct: 74 ASGRLAVVDATNVQADARRPLVALAREHHVLPVAIVLDMPEKLCHARNAGRPDRQ---FG 130
Query: 135 GKAAAVVNRMLQK--KELPKLSEGFSRITLCQNENDVQAA--------LDTYSGLGPLDT 184
+R L++ KEL + EGF + + + +V AA D GP D
Sbjct: 131 PHVVRGQSRELRRSLKELRR--EGFRYVHVLSSPEEVAAATIERQRLWTDRRDERGPFDI 188
Query: 185 L--PHGSFGQ 192
+ HG F +
Sbjct: 189 IGDVHGCFDE 198
>gi|428297055|ref|YP_007135361.1| polynucleotide 2',3'-cyclic phosphate phosphodiesterase [Calothrix
sp. PCC 6303]
gi|428233599|gb|AFY99388.1| polynucleotide 3'-phosphatase [Calothrix sp. PCC 6303]
Length = 858
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTSASSA-L 75
LVI++GA GSGKSTF + + + C+ D N+ S + L ++ L
Sbjct: 10 LVILIGASGSGKSTFARNYFQQFEVISSDFCRGLVSDDENNQASSKDAFELLHYITAKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHEGN 131
GK +D N++ E R +++KL + H A+ L++P ++C R+ +R + +
Sbjct: 70 ATGKLTVIDATNVQPEDRKEYIKLAR---EYHFLSVAIALNVPEEVCHERNAQRSDRQF- 125
Query: 132 LQGGKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDV 169
+ VV R Q ++ L L EGF + + + D+
Sbjct: 126 -----GSHVVRRHTQALRRSLRGLEREGFRYVHVLNSLEDI 161
>gi|170049707|ref|XP_001858111.1| polynucleotide kinase- 3'-phosphatase [Culex quinquefasciatus]
gi|167871472|gb|EDS34855.1| polynucleotide kinase- 3'-phosphatase [Culex quinquefasciatus]
Length = 526
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
+Q +++MVG PGSGKS F + S + I +D + G+ +C++ S LK G
Sbjct: 367 QQEVIVMVGFPGSGKSHFARAQLESKG--YVHINRDAL-----GSWQKCVSLLDSTLKSG 419
Query: 79 KSVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKA 137
K +D N + + R FV+L V V+ K +V R E
Sbjct: 420 KRAVVDNTNPDVDSRKRFVELAKKRNVPCRCFVMGATYKQSRHNNVFR-ELTDRSHSSIN 478
Query: 138 AAVVNRMLQKKELPKLSEGFSRI 160
V N K + P LSEGF I
Sbjct: 479 DMVFNMYKSKYQEPALSEGFDEI 501
>gi|376297945|ref|YP_005169175.1| Appr-1-p processing protein [Desulfovibrio desulfuricans ND132]
gi|323460507|gb|EGB16372.1| Appr-1-p processing domain protein [Desulfovibrio desulfuricans
ND132]
Length = 182
Score = 49.3 bits (116), Expect = 0.006, Method: Composition-based stats.
Identities = 40/101 (39%), Positives = 50/101 (49%), Gaps = 24/101 (23%)
Query: 342 PKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAG-PALEVATAER 400
P + GDITRL + + NAAN RL GGGGV+ AI AAG L+ A E
Sbjct: 9 PGRLSVREGDITRLTV------DAVVNAANSRLA-GGGGVDGAIHRAAGIDRLQAACREI 61
Query: 401 AK---SLYPGNSVIVP---LPSTSPLCGREGVTHVIHVLGP 435
+ SL PG +VI P LP+ H+IH +GP
Sbjct: 62 IREIGSLPPGEAVITPGFGLPA----------RHIIHTVGP 92
>gi|449301490|gb|EMC97501.1| hypothetical protein BAUCODRAFT_33217 [Baudoinia compniacensis UAMH
10762]
Length = 440
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V++ G+PG+GKSTF ++ + R+ QD + T+ +C+ A+ + G SV
Sbjct: 281 IVLLCGSPGAGKSTFYWQHLQPLG--YERVNQDILK-----TREKCMKVAAEYVSSGHSV 333
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N + E R +V L +V + V AKLC R G+L + +
Sbjct: 334 AVDNTNADIETRAAWVGLSKQLKVPIRLVHFTASAKLCEHNDTVRAL-AGDLMNPEKRTM 392
Query: 141 VNRM-----LQKKELPKLSEGFSRITLCQNENDVQ 170
+ ++ + PK+ EGF IT END +
Sbjct: 393 LPKLAFTGYAARYREPKVEEGFDDIT----ENDFK 423
>gi|148690815|gb|EDL22762.1| polynucleotide kinase 3'- phosphatase, isoform CRA_c [Mus musculus]
Length = 426
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C++S +AL++GK V
Sbjct: 270 VVVAVGFPGAGKSTFIQEHLVSAG--YVHVNRDTL-----GSWQRCVSSCQAALRQGKRV 322
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +++ + V + A + +R R + + +V
Sbjct: 323 VIDNTNPDVPSRARYIQCAK-DAGVPCRCFNFCATIEQARHNNRFREMTDPSHAPVSDMV 381
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGF I
Sbjct: 382 MFSYRKQFEPPTLAEGFLEI 401
>gi|357380816|pdb|3ZVM|A Chain A, The Structural Basis For Substrate Recognition By
Mammalian Polynucleotide Kinase 3' Phosphatase
gi|357380817|pdb|3ZVM|B Chain B, The Structural Basis For Substrate Recognition By
Mammalian Polynucleotide Kinase 3' Phosphatase
Length = 416
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C++S +AL++GK V
Sbjct: 260 VVVAVGFPGAGKSTFIQEHLVSAG--YVHVNRDTL-----GSWQRCVSSCQAALRQGKRV 312
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +++ + V + A + +R R + + +V
Sbjct: 313 VIDNTNPDVPSRARYIQCAK-DAGVPCRCFNFCATIEQARHNNRFREMTDPSHAPVSDMV 371
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGF I
Sbjct: 372 MFSYRKQFEPPTLAEGFLEI 391
>gi|7272098|gb|AAF44716.1|AC018766_1 Polynucleotide kinase 3'-phosphatase, partial sequence [Homo
sapiens]
Length = 456
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+T+ +ALK+GK V
Sbjct: 302 VVVAVGFPGAGKSTFLKKHLVSAG--YVHVNRDTL-----GSWQRCVTTCETALKQGKRV 354
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +V+ V A L +R R + + +V
Sbjct: 355 AIDNTNPDAASRARYVQCAR-AAGVPCRCFLFTATLEQARHNNRFREMTDSSHIPVSDMV 413
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGFS I
Sbjct: 414 MYGYRKQFEAPTLAEGFSAI 433
>gi|358397591|gb|EHK46959.1| hypothetical protein TRIATDRAFT_46287 [Trichoderma atroviride IMI
206040]
Length = 459
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 23/143 (16%)
Query: 15 EKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSA 74
E+K Q +V+ G PG+GKSTF +V++ + R+ QDT+ ++ +C+ A
Sbjct: 295 ERKNDQDVVLFCGPPGAGKSTFYFNVLKPLG--YERVNQDTLK-----SRDKCIQVAREL 347
Query: 75 LKKGKSVFLDRCNLEREQRT---DFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGN 131
LK GKSV +D N + + R D K G V + + P +C EH
Sbjct: 348 LKDGKSVTVDNTNADPDTRALWIDVAKKAG--VPIRCLWFSTPVIVC--------EHNDA 397
Query: 132 LQGGKAAAVVNRMLQKKELPKLS 154
++ AV+N ++ LPKL+
Sbjct: 398 VRANN--AVLNPE-ARQSLPKLA 417
>gi|320166899|gb|EFW43798.1| UPF0189 protein [Capsaspora owczarzaki ATCC 30864]
Length = 1991
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 22/117 (18%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL------EVATAERAKS 403
GDIT+ + G +V+ NAAN +L GG+N I AAGP L + E+
Sbjct: 29 GDITK-WVG-----DVVVNAANPQLT-ALGGLNGVIHEAAGPELLRSCQINIPLNEQGVR 81
Query: 404 LYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPN-----MNPRRPNCLDGDYVKGCEI 455
PG++V+ + P R G +HVIH +GPN M PR L ++ +
Sbjct: 82 CPPGDAVL----TLGPFSPRLGASHVIHAVGPNLHDPSMQPRAAELLKSAILRALHL 134
>gi|74192573|dbj|BAE43066.1| unnamed protein product [Mus musculus]
Length = 486
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C++S +AL++GK V
Sbjct: 330 VVVAVGFPGAGKSTFIQEHLVSAG--YVHVNRDTL-----GSWQRCVSSCQAALRQGKRV 382
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +++ + V + A + +R R + + +V
Sbjct: 383 VIDNTNPDVPSRARYIQCAK-DAGVPCRCFNFCATIEQARHNNRFREMTDPSHAPVSDMV 441
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGF I
Sbjct: 442 MFSYRKQFEPPTLAEGFLEI 461
>gi|31417934|gb|AAH02519.2| PNKP protein [Homo sapiens]
Length = 482
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+T+ +ALK+GK V
Sbjct: 328 VVVAVGFPGAGKSTFLKKHLVSAG--YVHVNRDTL-----GSWQRCVTTCETALKQGKRV 380
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +V+ V A L +R R + + +V
Sbjct: 381 AIDNTNPDAASRARYVQCAR-AAGVPCRCFLFTATLEQARHNNRFREMTDSSHIPVSDMV 439
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGFS I
Sbjct: 440 MYGYRKQFEAPTLAEGFSAI 459
>gi|426259151|ref|XP_004023164.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase-like,
partial [Ovis aries]
Length = 241
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 11/141 (7%)
Query: 22 LVIMVGAPGSGKSTFC-EHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+V+ VG PG+GKSTF EH++ + + + +DT+ G+ +C+T+ +ALK+ K
Sbjct: 87 VVVAVGFPGAGKSTFLREHLVSAG---YVHVNRDTL-----GSWQRCVTACEAALKQRKP 138
Query: 81 VFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
V +D N + + R ++K + V A L +R R + + V
Sbjct: 139 VVIDNTNPDVQSRARYIKCAR-DAGVPCRCFLFRATLEQARHNNRFREMTDSSHMPVSDV 197
Query: 141 VNRMLQKK-ELPKLSEGFSRI 160
V +K+ E P L+EGF+ +
Sbjct: 198 VIYSYRKQFEAPTLAEGFAAV 218
>gi|170069054|ref|XP_001869092.1| polynucleotide kinase- 3'-phosphatase [Culex quinquefasciatus]
gi|167865016|gb|EDS28399.1| polynucleotide kinase- 3'-phosphatase [Culex quinquefasciatus]
Length = 558
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
+Q +++MVG PGSGKS F + S + I +D + G+ +C++ S LK G
Sbjct: 399 QQEVIVMVGFPGSGKSHFARAQLESKG--YVHINRDAL-----GSWQKCVSLLDSTLKSG 451
Query: 79 KSVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKA 137
K +D N + + R FV+L V V+ K +V R E
Sbjct: 452 KRAVVDNTNPDVDSRKRFVELAKKRNVPCRCFVMGATYKQSRHNNVFR-ELTDRSHSSIN 510
Query: 138 AAVVNRMLQKKELPKLSEGFSRI 160
V N K + P LSEGF I
Sbjct: 511 DMVFNMYKSKYQEPALSEGFDEI 533
>gi|440288075|ref|YP_007340840.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Enterobacteriaceae bacterium strain FGI 57]
gi|440047597|gb|AGB78655.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Enterobacteriaceae bacterium strain FGI 57]
Length = 180
Score = 48.9 bits (115), Expect = 0.007, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 47/89 (52%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDIT+L +VI NAAN L GGGGV+ AI AAGPALE A A ++ + P
Sbjct: 10 GDITQLDV------DVIVNAANPSLM-GGGGVDGAIHRAAGPALEEACAVVRQQQGTCPP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI G VIH +GP
Sbjct: 63 GHAVITH-------AGNLKAKAVIHTVGP 84
>gi|328871462|gb|EGG19832.1| hypothetical protein DFA_06934 [Dictyostelium fasciculatum]
Length = 580
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 20 QILVIMVGAPGSGKSTFCE-HVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
Q LV+M G P SGKSTF + H + + + + +DT+ TK +C+ +L +G
Sbjct: 425 QELVLMCGFPASGKSTFSKTHFVPAG---YVHVNRDTLK-----TKEKCIKVCKESLAQG 476
Query: 79 KSVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKA 137
SV +D N + R D++KL V V + P +L + R QG K
Sbjct: 477 LSVVIDNTNPAKTDRLDYIKLAKQYGVPVRCFRMQTPLELAQHLNYYR----ERTQGVKH 532
Query: 138 AAVVNRMLQKKEL--PKLSEGFSRI 160
+ + KK P SEG+ I
Sbjct: 533 VPGIGYNMFKKNFVEPHTSEGYEEI 557
>gi|5764101|gb|AAD51135.1|AF126486_1 polynucleotide kinase-3'-phosphatase [Homo sapiens]
Length = 521
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+T+ +ALK+GK V
Sbjct: 367 VVVAVGFPGAGKSTFLKKHLVSAG--YVHVNRDTL-----GSWQRCVTTCETALKQGKRV 419
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +V+ V A L +R R + + +V
Sbjct: 420 AIDNTNPDAASRARYVQCAR-AAGVPCRCFLFTATLEQARHNNRFREMTDSSHIPVSDMV 478
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGFS I
Sbjct: 479 MYGYRKQFEAPTLAEGFSAI 498
>gi|408374836|ref|ZP_11172517.1| Appr-1-p processing protein [Alcanivorax hongdengensis A-11-3]
gi|407765246|gb|EKF73702.1| Appr-1-p processing protein [Alcanivorax hongdengensis A-11-3]
Length = 181
Score = 48.9 bits (115), Expect = 0.008, Method: Composition-based stats.
Identities = 38/92 (41%), Positives = 44/92 (47%), Gaps = 20/92 (21%)
Query: 347 TFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYP 406
T GDITR + + NAAN RL+P GGGV AI AAGP L E + P
Sbjct: 13 TVQGDITRQDD-----LDAVVNAANARLRP-GGGVAGAIHRAAGPGL-ARECEALAPIQP 65
Query: 407 GNSVIVP---LPSTSPLCGREGVTHVIHVLGP 435
G +VI LP+ HVIH LGP
Sbjct: 66 GQAVITAGHDLPN----------RHVIHCLGP 87
>gi|5757919|gb|AAD50639.1|AF125807_1 DNA 5'-kinase/3'-phosphatase [Homo sapiens]
Length = 521
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+T+ +ALK+GK V
Sbjct: 367 VVVAVGFPGAGKSTFLKKHLVSAG--YVHVNRDTL-----GSWQRCVTTCETALKQGKRV 419
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +V+ V A L +R R + + +V
Sbjct: 420 AIDNTNPDAASRARYVQCAR-AAGVPCRCFLFTATLEQARHNNRFREMTDSSHIPVSDMV 478
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGFS I
Sbjct: 479 MYGYRKQFEAPTLAEGFSAI 498
>gi|51948486|ref|NP_001004259.1| bifunctional polynucleotide phosphatase/kinase [Rattus norvegicus]
gi|50925861|gb|AAH79307.1| Polynucleotide kinase 3'-phosphatase [Rattus norvegicus]
gi|149056016|gb|EDM07447.1| polynucleotide kinase 3'-phosphatase, isoform CRA_a [Rattus
norvegicus]
Length = 522
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 11/154 (7%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+ S +AL++GK V
Sbjct: 366 VVVAVGFPGAGKSTFIQKHLVSAG--YVHVNRDTL-----GSWQRCVNSCQAALRQGKQV 418
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + + R +++ + V A + +R R + + +V
Sbjct: 419 VIDNTNPDIQSRARYIQCAK-DAGVPCRCFSFCATIEQARHNNRFREMTDPSHAPVSDMV 477
Query: 142 NRMLQKK-ELPKLSEGFSRITLCQNENDVQAALD 174
+K+ E P L+EGF + + Q +Q LD
Sbjct: 478 MFSYRKQFEPPTLAEGF--LEILQVPFRLQEHLD 509
>gi|31543419|ref|NP_009185.2| bifunctional polynucleotide phosphatase/kinase [Homo sapiens]
gi|50401132|sp|Q96T60.1|PNKP_HUMAN RecName: Full=Bifunctional polynucleotide phosphatase/kinase;
AltName: Full=DNA 5'-kinase/3'-phosphatase; AltName:
Full=Polynucleotide kinase-3'-phosphatase; Includes:
RecName: Full=Polynucleotide 3'-phosphatase; AltName:
Full=2'(3')-polynucleotidase; Includes: RecName:
Full=Polynucleotide 5'-hydroxyl-kinase
gi|14211141|gb|AAK57340.1|AF354258_1 polynucleotide kinase-3'-phosphatase [Homo sapiens]
gi|21707155|gb|AAH33822.1| Polynucleotide kinase 3'-phosphatase [Homo sapiens]
gi|22001025|gb|AAM82170.1| polynucleotide kinase 3'-phosphatase [Homo sapiens]
gi|123979806|gb|ABM81732.1| polynucleotide kinase 3'-phosphatase [synthetic construct]
gi|123994571|gb|ABM84887.1| polynucleotide kinase 3'-phosphatase [synthetic construct]
gi|208967098|dbj|BAG73563.1| polynucleotide kinase 3'-phosphatase [synthetic construct]
Length = 521
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+T+ +ALK+GK V
Sbjct: 367 VVVAVGFPGAGKSTFLKKHLVSAG--YVHVNRDTL-----GSWQRCVTTCETALKQGKRV 419
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +V+ V A L +R R + + +V
Sbjct: 420 AIDNTNPDAASRARYVQCAR-AAGVPCRCFLFTATLEQARHNNRFREMTDSSHIPVSDMV 478
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGFS I
Sbjct: 479 MYGYRKQFEAPTLAEGFSAI 498
>gi|402225640|gb|EJU05701.1| PNK3P-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 444
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 28/153 (18%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARP--WARICQDTINKGKSGTKVQCLTSASSALKKGK 79
+V+ VG P SGK++F R P + + QDT+ T+ +C+ +++G
Sbjct: 283 IVLFVGPPASGKTSF----FRKHFEPFKYQHVNQDTLK-----TRAKCMQMVEKVVREGH 333
Query: 80 SVFLDRCNLEREQRTDFV----KLGGP----EVDVHAVVL----DLPAKLCISRSVKRIE 127
V +D N ++E R ++V KLG P +V ++ L +L C++ + +
Sbjct: 334 GVVVDNTNRDKETRKEYVALAEKLGVPIRCLSFNV-SIALGWHNNLYRAFCLASEHRDHQ 392
Query: 128 HEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRI 160
L A+ N+M E P LSEGF I
Sbjct: 393 KREMLPYSAFASFTNQM----EEPDLSEGFKEI 421
>gi|307196487|gb|EFN78039.1| Bifunctional polynucleotide phosphatase/kinase [Harpegnathos
saltator]
Length = 563
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 7 DTCKAKDEEKKWKQI-LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKV 65
D CK D KQ ++++VG+PGSGKS F +H ++ + +N+ G+
Sbjct: 393 DICKPADANLTLKQQEVILLVGSPGSGKSHFAKHYLKK---------YEYVNRDSLGSWQ 443
Query: 66 QCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLG 100
+C L +GKSV +D N + R ++++
Sbjct: 444 KCTAMVDQYLNQGKSVVIDNTNPDPMSRQRYIEVA 478
>gi|452985240|gb|EME84997.1| hypothetical protein MYCFIDRAFT_41913 [Pseudocercospora fijiensis
CIRAD86]
Length = 445
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 12/144 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ G+PG+GKSTF + R + R+ QD + T+ +C+ A+ +++ SV
Sbjct: 286 IVLFCGSPGAGKSTF--YWQRLQPLGYERVNQDILK-----TRDKCMKKAAEFIEEKTSV 338
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N + E R ++ L +V + V PAKLC R G + K +
Sbjct: 339 VVDNTNADVEVRAAWIGLARKLQVPIRLVHFTAPAKLCEHNDTVRALSNGLMNPEKRTIL 398
Query: 141 ----VNRMLQKKELPKLSEGFSRI 160
+ + P+ EGF I
Sbjct: 399 PPMAFSGFTSRYREPRAEEGFQDI 422
>gi|333023840|ref|ZP_08451904.1| putative serine/threonine protein phosphatase [Streptomyces sp.
Tu6071]
gi|332743692|gb|EGJ74133.1| putative serine/threonine protein phosphatase [Streptomyces sp.
Tu6071]
Length = 843
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKSTF + + + C+ D ++ S L A L
Sbjct: 6 LVVLIGATGSGKSTFAARHFKPTEVLSSDFCRGLVADDQNDQSASRDAFDVLHHIAGKRL 65
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D +++RE R + L E DV A+VLD+P ++C R+ R + G
Sbjct: 66 AAGRLTVVDATSVQRESRKQLIDL-AREYDVLPVAIVLDVPEEVCAERNAGREDRAG--- 121
Query: 134 GGKAAAVVNRMLQK--KELPKL-----SEGFSRITLCQNENDVQAA 172
V R++Q+ +EL + EGF ++ + + +V AA
Sbjct: 122 ------VPRRVIQRHQRELRRSLRGLEREGFRKVHVLKGVAEVGAA 161
>gi|440698788|ref|ZP_20881116.1| Ser/Thr phosphatase family protein [Streptomyces turgidiscabies
Car8]
gi|440278813|gb|ELP66792.1| Ser/Thr phosphatase family protein [Streptomyces turgidiscabies
Car8]
Length = 861
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKSTF + + + C+ D ++ SG L A L
Sbjct: 28 LVVLIGASGSGKSTFARRHFKPTEIISSDFCRGLVADDENDQSASGDAFDVLHYIAGKRL 87
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D N++ R ++L + DV AVVLD+P +C R+ R + +
Sbjct: 88 AAGRRTVVDATNVQESSRKQLIEL-ARQYDVLPIAVVLDVPDDVCAERNASRTD-----R 141
Query: 134 GGKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAA 172
V++R ++ ++ L L EGF ++ + + +++ A
Sbjct: 142 ADMPRRVIHRHIRELRRSLRHLEREGFRKVHVLRGVEEIENA 183
>gi|421741533|ref|ZP_16179724.1| polynucleotide kinase-phosphatase [Streptomyces sp. SM8]
gi|406690071|gb|EKC93901.1| polynucleotide kinase-phosphatase [Streptomyces sp. SM8]
Length = 756
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKSTF + + + C+ D ++ S L A L
Sbjct: 25 LVVLIGATGSGKSTFAARHFKPTEVLSSDFCRGLVADDENDQSASTDAFDVLHHIAGKRL 84
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
G+ +D +++RE R V L +V AVVLDLP ++C R+ R + G +
Sbjct: 85 AAGRLTVVDATSVQRESRRQLVDLARRHDVLPVAVVLDLPEEVCAERNAARPDRAGVHR- 143
Query: 135 GKAAAVVNRMLQKKELPKLSEGFSRITLCQNEND 168
+ A R L++ EGF +I + +++ +
Sbjct: 144 -RVIARHRRELRRSLKGLEREGFRKIHVLRSQQE 176
>gi|148690816|gb|EDL22763.1| polynucleotide kinase 3'- phosphatase, isoform CRA_d [Mus musculus]
Length = 531
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C++S +AL++GK V
Sbjct: 375 VVVAVGFPGAGKSTFIQEHLVSAG--YVHVNRDTL-----GSWQRCVSSCQAALRQGKRV 427
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +++ + V + A + +R R + + +V
Sbjct: 428 VIDNTNPDVPSRARYIQCAK-DAGVPCRCFNFCATIEQARHNNRFREMTDPSHAPVSDMV 486
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGF I
Sbjct: 487 MFSYRKQFEPPTLAEGFLEI 506
>gi|434386768|ref|YP_007097379.1| polynucleotide kinase-phosphatase [Chamaesiphon minutus PCC 6605]
gi|428017758|gb|AFY93852.1| polynucleotide kinase-phosphatase [Chamaesiphon minutus PCC 6605]
Length = 856
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 21/156 (13%)
Query: 22 LVIMVGAPGSGKSTFC-EHVM----RSSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKS+F +H + SS + +C D N+ + + L + L
Sbjct: 10 LVVLIGASGSGKSSFARKHFLGTEIISSDYCRSIVCDDETNQAATTDAFELLHYIVAKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHEGN 131
K G+ +D N++ E R ++L D H A+V ++PA+LC R+ +R +
Sbjct: 70 KAGRLTVVDATNVKPEDRKPLLQLAK---DYHCFAVAIVFNIPAELCHDRNQQRENRDFG 126
Query: 132 LQGGKAAAVVNRMLQ--KKELPKLSEGFSRITLCQN 165
+ VV R + K+ L L F + + N
Sbjct: 127 IH------VVKRHTENLKRSLRHLDREFRYVHILSN 156
>gi|269954883|ref|YP_003324672.1| Appr-1-p processing domain-containing protein [Xylanimonas
cellulosilytica DSM 15894]
gi|269303564|gb|ACZ29114.1| Appr-1-p processing domain protein [Xylanimonas cellulosilytica DSM
15894]
Length = 175
Score = 48.9 bits (115), Expect = 0.009, Method: Composition-based stats.
Identities = 39/98 (39%), Positives = 50/98 (51%), Gaps = 25/98 (25%)
Query: 347 TFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYP 406
T +GDITR+ + I NAAN L GGGGV+ AI +AAGP L A E ++ YP
Sbjct: 5 TELGDITRVDA------DAIVNAANSTLL-GGGGVDGAIHAAAGPRLLAACREVRRTTYP 57
Query: 407 -----GNSVIVP---LPSTSPLCGREGVTHVIHVLGPN 436
G++V P LP+ VIH +GPN
Sbjct: 58 DGLPVGDAVATPAFDLPA----------RWVIHTVGPN 85
>gi|330465013|ref|YP_004402756.1| metallophosphoesterase [Verrucosispora maris AB-18-032]
gi|328807984|gb|AEB42156.1| metallophosphoesterase [Verrucosispora maris AB-18-032]
Length = 842
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 22/181 (12%)
Query: 22 LVIMVGAPGSGKSTFCE------HVMRSSARPWARICQDTINKGKSGTKVQCL-TSASSA 74
LV +VG GSGKSTF V+ S A A + D ++ S L A
Sbjct: 12 LVALVGVSGSGKSTFARRHFAPSQVLSSDAFR-AMVADDENDQSASADAFDALHYVAGKR 70
Query: 75 LKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNL 132
L+ G+ +D NL+ R V++ E DV A+VLD+P L +R+ R +
Sbjct: 71 LRAGRLTVVDATNLQPHARAALVRVAR-EHDVLPVAIVLDVPEALAWARTEARAD---RT 126
Query: 133 QGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGL--------GPLDT 184
G + A ++R L++ EGF ++ + + +++ AA + L GP D
Sbjct: 127 FGKQVLARMSRDLRRTYAQLAREGFRKVHVLRGVDEIDAAQIRFERLFNDRRELTGPFDI 186
Query: 185 L 185
+
Sbjct: 187 V 187
>gi|148690817|gb|EDL22764.1| polynucleotide kinase 3'- phosphatase, isoform CRA_e [Mus musculus]
Length = 304
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C++S +AL++GK V
Sbjct: 148 VVVAVGFPGAGKSTFIQEHLVSAG--YVHVNRDTL-----GSWQRCVSSCQAALRQGKRV 200
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +++ + V + A + +R R + + +V
Sbjct: 201 VIDNTNPDVPSRARYIQCAK-DAGVPCRCFNFCATIEQARHNNRFREMTDPSHAPVSDMV 259
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGF I
Sbjct: 260 MFSYRKQFEPPTLAEGFLEI 279
>gi|50401169|sp|Q9JLV6.2|PNKP_MOUSE RecName: Full=Bifunctional polynucleotide phosphatase/kinase;
AltName: Full=DNA 5'-kinase/3'-phosphatase; AltName:
Full=Polynucleotide kinase-3'-phosphatase; Includes:
RecName: Full=Polynucleotide 3'-phosphatase; AltName:
Full=2'(3')-polynucleotidase; Includes: RecName:
Full=Polynucleotide 5'-hydroxyl-kinase
gi|34785469|gb|AAH57659.1| Polynucleotide kinase 3'- phosphatase [Mus musculus]
Length = 522
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C++S +AL++GK V
Sbjct: 366 VVVAVGFPGAGKSTFIQEHLVSAG--YVHVNRDTL-----GSWQRCVSSCQAALRQGKRV 418
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +++ + V + A + +R R + + +V
Sbjct: 419 VIDNTNPDVPSRARYIQCAK-DAGVPCRCFNFCATIEQARHNNRFREMTDPSHAPVSDMV 477
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGF I
Sbjct: 478 MFSYRKQFEPPTLAEGFLEI 497
>gi|336321916|ref|YP_004601884.1| Appr-1-p processing domain protein [[Cellvibrio] gilvus ATCC 13127]
gi|336105497|gb|AEI13316.1| Appr-1-p processing domain protein [[Cellvibrio] gilvus ATCC 13127]
Length = 179
Score = 48.9 bits (115), Expect = 0.009, Method: Composition-based stats.
Identities = 41/95 (43%), Positives = 47/95 (49%), Gaps = 25/95 (26%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPA-LEVATAERAK----SL 404
GDITR +VI NAAN L GGGGV+ AI +AAGP LE A RA L
Sbjct: 8 GDITRQQV------DVIVNAANSSLL-GGGGVDGAIHAAAGPGLLEACRALRADRLPAGL 60
Query: 405 YPGNSVIVP---LPSTSPLCGREGVTHVIHVLGPN 436
PG SV P LP+ V+H +GPN
Sbjct: 61 APGRSVATPAFDLPA----------RWVVHTVGPN 85
>gi|62738645|pdb|1YJ5|A Chain A, Molecular Architecture Of Mammalian Polynucleotide Kinase,
A Dna Repair Enzyme
gi|62738646|pdb|1YJ5|B Chain B, Molecular Architecture Of Mammalian Polynucleotide Kinase,
A Dna Repair Enzyme
Length = 383
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C++S +AL++GK V
Sbjct: 227 VVVAVGFPGAGKSTFIQEHLVSAG--YVHVNRDTL-----GSWQRCVSSCQAALRQGKRV 279
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +++ + V + A + +R R + + V
Sbjct: 280 VIDNTNPDVPSRARYIQCAK-DAGVPCRCFNFCATIEQARHNNRFREXTDPSHAPVSDXV 338
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGF I
Sbjct: 339 XFSYRKQFEPPTLAEGFLEI 358
>gi|390339086|ref|XP_785301.2| PREDICTED: bifunctional polynucleotide phosphatase/kinase-like
[Strongylocentrotus purpuratus]
Length = 661
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 9/79 (11%)
Query: 20 QILVIMVGAPGSGKSTFCE-HVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
Q +VI+VG P SGKSTF + HV+ + + +DT+ G+ +C+ + SSAL KG
Sbjct: 501 QEVVILVGFPASGKSTFVKNHVL---PHKYVHVNRDTM-----GSWQKCVAACSSALCKG 552
Query: 79 KSVFLDRCNLEREQRTDFV 97
+SV +D N + + R +V
Sbjct: 553 QSVVIDNTNADVDSRKRYV 571
>gi|119572951|gb|EAW52566.1| polynucleotide kinase 3'-phosphatase, isoform CRA_b [Homo sapiens]
Length = 302
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+T+ +ALK+GK V
Sbjct: 148 VVVAVGFPGAGKSTFLKKHLVSAG--YVHVNRDTL-----GSWQRCVTTCETALKQGKRV 200
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +V+ V A L +R R + + +V
Sbjct: 201 AIDNTNPDAASRARYVQCAR-AAGVPCRCFLFTATLEQARHNNRFREMTDSSHIPVSDMV 259
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGFS I
Sbjct: 260 MYGYRKQFEAPTLAEGFSAI 279
>gi|406860759|gb|EKD13816.1| polynucleotide kinase 3 phosphatase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 455
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 15 EKKWKQILVIMVGAPGSGKSTF----CEHVMRSSARPWARICQDTINKGKSGTKVQCLTS 70
EKK +V+ G+PG+GKSTF EH+ + RI QD + T+ +CL +
Sbjct: 291 EKKHDCDIVLFCGSPGAGKSTFFFRNLEHLG------YTRINQDILK-----TREKCLKA 339
Query: 71 ASSALKKGKSVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHE 129
A+ L +GKSV +D N E R +++L V + V+ +++C R ++
Sbjct: 340 AAVCLAEGKSVAIDNTNACPEVRKKWIELAAKHAVPIRCVLFTAASQICEHNDAVRALND 399
Query: 130 GNLQGGKAAAVVNRML-----QKKELPKLSEGFSRIT 161
+ + ++ M + P++ EGF IT
Sbjct: 400 --VMNPEKRTILPSMAFKGFGSRYRRPQVDEGFEDIT 434
>gi|281348342|gb|EFB23926.1| hypothetical protein PANDA_006254 [Ailuropoda melanoleuca]
Length = 514
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S + + +DT+ G+ +C+T+ +ALK+ K V
Sbjct: 367 VVVAVGFPGAGKSTFLQEHLVSVG--YVHVNRDTL-----GSWQRCVTTCETALKQRKRV 419
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRI-EHEGNLQGGKAAAV 140
+D N + R ++K + V A L +R R E G+ + V
Sbjct: 420 VIDNTNPDPLSRARYIKCAQ-DAGVPCRCFLFTATLEQARHNNRFREMTGSSHAPVSDMV 478
Query: 141 VNRMLQKKELPKLSEGFSRI 160
+ ++ E P L EGFS I
Sbjct: 479 MYGYRKQFEAPTLVEGFSAI 498
>gi|118601009|ref|NP_067524.2| bifunctional polynucleotide phosphatase/kinase [Mus musculus]
gi|148690814|gb|EDL22761.1| polynucleotide kinase 3'- phosphatase, isoform CRA_b [Mus musculus]
Length = 522
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C++S +AL++GK V
Sbjct: 366 VVVAVGFPGAGKSTFIQEHLVSAG--YVHVNRDTL-----GSWQRCVSSCQAALRQGKRV 418
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +++ + V + A + +R R + + +V
Sbjct: 419 VIDNTNPDVPSRARYIQCAK-DAGVPCRCFNFCATIEQARHNNRFREMTDPSHAPVSDMV 477
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGF I
Sbjct: 478 MFSYRKQFEPPTLAEGFLEI 497
>gi|67539162|ref|XP_663355.1| hypothetical protein AN5751.2 [Aspergillus nidulans FGSC A4]
gi|40743654|gb|EAA62844.1| hypothetical protein AN5751.2 [Aspergillus nidulans FGSC A4]
gi|259484772|tpe|CBF81279.1| TPA: DNA kinase/phosphatase (Eurofung) [Aspergillus nidulans FGSC
A4]
Length = 519
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 61/147 (41%), Gaps = 19/147 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI G+PG+GKSTF ++ + R+ QD + ++ +C+ A L KSV
Sbjct: 277 LVIFCGSPGAGKSTFFWDYLKPLG--YERVNQDILK-----SRAKCIKVAKEHLAAQKSV 329
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRI-------EHEGNLQ 133
+D N + E R ++ + V + V P LC + R E L
Sbjct: 330 VVDNTNADVETRAQWIGVAKEFNVPIRCVYFTAPPALCKHNNAVRAANTSLNPESRTLLP 389
Query: 134 GGKAAAVVNRMLQKKELPKLSEGFSRI 160
G V R + P L+EGF I
Sbjct: 390 GIAFGDFVKRFKE----PSLAEGFQDI 412
>gi|407694758|ref|YP_006819546.1| RNase III regulator YmdB [Alcanivorax dieselolei B5]
gi|407252096|gb|AFT69203.1| RNase III regulator YmdB [Alcanivorax dieselolei B5]
Length = 172
Score = 48.5 bits (114), Expect = 0.010, Method: Composition-based stats.
Identities = 41/98 (41%), Positives = 48/98 (48%), Gaps = 20/98 (20%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGN 408
VGDITR + I NAAN LKP GGGV AI AAGP L A A A + PG
Sbjct: 8 VGDITRQAD-----MDAIVNAANRELKP-GGGVAGAIHRAAGPELARACAPLA-PIRPGE 60
Query: 409 SVIVP---LPSTSPLCGREGVTHVIHVLGPNMNPRRPN 443
+VI LP+ +VIH LGP +P+
Sbjct: 61 AVITAGFDLPN----------RYVIHCLGPVYQLDQPS 88
>gi|361131896|pdb|3U7G|A Chain A, Crystal Structure Of Mpnkp Catalytic Fragment (D170a)
Bound To Single- Stranded Dna (Tcctap)
Length = 379
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C++S +AL++GK V
Sbjct: 223 VVVAVGFPGAGKSTFIQEHLVSAG--YVHVNRDTL-----GSWQRCVSSCQAALRQGKRV 275
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +++ + V + A + +R R + + V
Sbjct: 276 VIDNTNPDVPSRARYIQCAK-DAGVPCRCFNFCATIEQARHNNRFREXTDPSHAPVSDXV 334
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGF I
Sbjct: 335 XFSYRKQFEPPTLAEGFLEI 354
>gi|301764927|ref|XP_002917944.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional polynucleotide
phosphatase/kinase-like [Ailuropoda melanoleuca]
Length = 778
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S + + +DT+ G+ +C+T+ +ALK+ K V
Sbjct: 599 VVVAVGFPGAGKSTFLQEHLVSVG--YVHVNRDTL-----GSWQRCVTTCETALKQRKRV 651
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRI-EHEGNLQGGKAAAV 140
+D N + R ++K + V A L +R R E G+ + V
Sbjct: 652 VIDNTNPDPLSRARYIKCAQ-DAGVPCRCFLFTATLEQARHNNRFREMTGSSHAPVSDMV 710
Query: 141 VNRMLQKKELPKLSEGFSRI 160
+ ++ E P L EGFS I
Sbjct: 711 MYGYRKQFEAPTLVEGFSAI 730
>gi|119572952|gb|EAW52567.1| polynucleotide kinase 3'-phosphatase, isoform CRA_c [Homo sapiens]
Length = 596
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+T+ +ALK+GK V
Sbjct: 442 VVVAVGFPGAGKSTFLKKHLVSAG--YVHVNRDTL-----GSWQRCVTTCETALKQGKRV 494
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +V+ V A L +R R + + +V
Sbjct: 495 AIDNTNPDAASRARYVQCAR-AAGVPCRCFLFTATLEQARHNNRFREMTDSSHIPVSDMV 553
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGFS I
Sbjct: 554 MYGYRKQFEAPTLAEGFSAI 573
>gi|7108591|gb|AAF36487.1|AF129451_1 polynucleotide kinase 3'-phosphatase [Mus musculus]
Length = 494
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C++S +AL++GK V
Sbjct: 338 VVVAVGFPGAGKSTFIQEHLVSAG--YVHVNRDTL-----GSWQRCVSSCQAALRQGKRV 390
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +++ + V + A + +R R + + +V
Sbjct: 391 VIDNTNPDVPSRARYIQCAK-DAGVPCRCFNFCATIEQARHNNRFREMTDPSHAPVSDMV 449
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGF I
Sbjct: 450 MFSYRKQFEPPTLAEGFLEI 469
>gi|149056017|gb|EDM07448.1| polynucleotide kinase 3'-phosphatase, isoform CRA_b [Rattus
norvegicus]
gi|149056018|gb|EDM07449.1| polynucleotide kinase 3'-phosphatase, isoform CRA_b [Rattus
norvegicus]
Length = 304
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 11/154 (7%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+ S +AL++GK V
Sbjct: 148 VVVAVGFPGAGKSTFIQKHLVSAG--YVHVNRDTL-----GSWQRCVNSCQAALRQGKQV 200
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + + R +++ + V A + +R R + + +V
Sbjct: 201 VIDNTNPDIQSRARYIQCAK-DAGVPCRCFSFCATIEQARHNNRFREMTDPSHAPVSDMV 259
Query: 142 NRMLQKK-ELPKLSEGFSRITLCQNENDVQAALD 174
+K+ E P L+EGF + + Q +Q LD
Sbjct: 260 MFSYRKQFEPPTLAEGF--LEILQVPFRLQEHLD 291
>gi|456877550|gb|EMF92565.1| polynucleotide kinase-phosphatase [Leptospira santarosai str.
ST188]
Length = 869
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 90/225 (40%), Gaps = 29/225 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMR-----SSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV+++G GSGKS+F + + SS A + D N+ + L A L
Sbjct: 21 LVVLIGTSGSGKSSFAKKHFKKSEILSSDECRALVSDDENNQAATNDAFDVLYYIARKRL 80
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHEGN 131
+ G +D N+ERE R ++L D H A++LD P K+C R+ R G
Sbjct: 81 QNGLLTVIDATNVERESRKGLIELSR---DYHCLPVAIILDTPNKVCEERNQNR---NGK 134
Query: 132 LQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAAL---------DTYSGLGPL 182
G R L+ EGF I + ++ ++ + D GP
Sbjct: 135 NFGSHVIHRQKRQLKSSIKSLKGEGFRNIYILKSVEEIDSVTAIIREKLYNDKKDISGPF 194
Query: 183 DTL--PHGSFGQKNPDAKIQLGIMKFLKKVDAPSNTGSTASSTQD 225
D + HG F ++ + I+LG LK D G S+ +
Sbjct: 195 DIIGDIHGCF-EELQELLIKLG-YSILKGKDDEKEYGFQVVSSNN 237
>gi|403413447|emb|CCM00147.1| predicted protein [Fibroporia radiculosa]
Length = 439
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 17/149 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG P GKSTF S+ +A + QDT+ T+ +C+ +A A+ +GKS
Sbjct: 274 VVVFVGFPSLGKSTFYRKYFASAG--YAHVNQDTLR-----TRDKCVKAAEEAVHEGKSC 326
Query: 82 FLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKR--------IEHEGNL 132
+D N E R +V++ ++ V +V D +L ++ R I E
Sbjct: 327 VIDNTNRNAETRRYYVEVARKAKIPVRCIVFDSSIELAWHNNLYRAFNLPPTSIVREPKR 386
Query: 133 QGGKAAAVVNRMLQKKELPKLSEGFSRIT 161
A Q +E P+ SEGF+ I
Sbjct: 387 DLLPYNAFTGFRAQYEE-PQSSEGFAEIV 414
>gi|402593649|gb|EJW87576.1| DNA 3'-phosphatase [Wuchereria bancrofti]
Length = 466
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 15/145 (10%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
++I VG PG GKS+ + + + + + +DT+ T +C+ +A LK+ ++V
Sbjct: 308 VLIFVGYPGCGKSSLAQKL--AVEHGYGIVNRDTLK-----TWQKCVENAKILLKRKQNV 360
Query: 82 FLDRCNLEREQRTDFVKL-----GGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGK 136
+D N +RE R ++ L G + L+ A C R + + E ++ G+
Sbjct: 361 IVDNTNADRESRKRYINLAKSFGAGLRCFLFNCTLEQAAHNCKYRVIVDAD-EKQIEIGR 419
Query: 137 AAAVVNRMLQKKELPKLSEGFSRIT 161
V+N +K E PKL EGFS I
Sbjct: 420 --MVLNGYKKKFEEPKLLEGFSSIV 442
>gi|392944940|ref|ZP_10310582.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Frankia sp. QA3]
gi|392288234|gb|EIV94258.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Frankia sp. QA3]
Length = 174
Score = 48.5 bits (114), Expect = 0.010, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 53/113 (46%), Gaps = 20/113 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE-RAKSLYPGN 408
GDIT + + I NAAN L GGGGV+ AI +A GP + A RA SL G
Sbjct: 9 GDITLIEA------DAIVNAANSALL-GGGGVDGAIHAAGGPEILAACRRLRATSLPRGL 61
Query: 409 SVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYT 461
+ +T+ GR HVIHV+GP +P +LR AYT
Sbjct: 62 PTGEAVATTA---GRLAARHVIHVVGPVYDPAEDR---------SALLRSAYT 102
>gi|410451287|ref|ZP_11305302.1| polynucleotide kinase-phosphatase [Leptospira sp. Fiocruz LV3954]
gi|410014788|gb|EKO76905.1| polynucleotide kinase-phosphatase [Leptospira sp. Fiocruz LV3954]
Length = 869
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 90/225 (40%), Gaps = 29/225 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMR-----SSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV+++G GSGKS+F + + SS A + D N+ + L A L
Sbjct: 21 LVVLIGTSGSGKSSFAKKHFKKSEILSSDECRALVSDDENNQAATNDAFDVLYYIARKRL 80
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHEGN 131
+ G +D N+ERE R ++L D H A++LD P K+C R+ R G
Sbjct: 81 QNGLLTVIDATNVERESRKGLIELSR---DYHCLPVAIILDTPNKVCEERNQNR---NGK 134
Query: 132 LQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAAL---------DTYSGLGPL 182
G R L+ EGF I + ++ ++ + D GP
Sbjct: 135 NFGSHVIHRQKRQLKSSIKSLKGEGFRNIYILKSVEEIDSVTAIIREKLYNDKKDISGPF 194
Query: 183 DTL--PHGSFGQKNPDAKIQLGIMKFLKKVDAPSNTGSTASSTQD 225
D + HG F ++ + I+LG LK D G S+ +
Sbjct: 195 DIIGDIHGCF-EELQELLIKLG-YSILKGKDDEKEYGFQVVSSNN 237
>gi|418743290|ref|ZP_13299654.1| polynucleotide kinase-phosphatase [Leptospira santarosai str.
CBC379]
gi|418753846|ref|ZP_13310084.1| polynucleotide kinase-phosphatase [Leptospira santarosai str.
MOR084]
gi|409965800|gb|EKO33659.1| polynucleotide kinase-phosphatase [Leptospira santarosai str.
MOR084]
gi|410795844|gb|EKR93736.1| polynucleotide kinase-phosphatase [Leptospira santarosai str.
CBC379]
Length = 869
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 90/225 (40%), Gaps = 29/225 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMR-----SSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV+++G GSGKS+F + + SS A + D N+ + L A L
Sbjct: 21 LVVLIGTSGSGKSSFAKKHFKKSEILSSDECRALVSDDENNQAATNDAFDVLYYIARKRL 80
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHEGN 131
+ G +D N+ERE R ++L D H A++LD P K+C R+ R G
Sbjct: 81 QNGLLTVIDATNVERESRKGLIELSR---DYHCLPVAIILDTPNKVCEERNQNR---NGK 134
Query: 132 LQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAAL---------DTYSGLGPL 182
G R L+ EGF I + ++ ++ + D GP
Sbjct: 135 NFGSHVIHRQKRQLKSSIKSLKGEGFRNIYILKSVEEIDSVTAIIREKLYNDKKDISGPF 194
Query: 183 DTL--PHGSFGQKNPDAKIQLGIMKFLKKVDAPSNTGSTASSTQD 225
D + HG F ++ + I+LG LK D G S+ +
Sbjct: 195 DIIGDIHGCF-EELQELLIKLG-YSILKGKDDEKEYGFQVVSSNN 237
>gi|256422300|ref|YP_003122953.1| bis(5'-nucleosyl)-tetraphosphatase [Chitinophaga pinensis DSM 2588]
gi|256037208|gb|ACU60752.1| Bis(5'-nucleosyl)-tetraphosphatase(asymmetrical) [Chitinophaga
pinensis DSM 2588]
Length = 847
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTIN-----KGKSGTKVQCLTS-ASSAL 75
L++++GA GSGKSTF + ++ + C++ ++ K S L L
Sbjct: 10 LIVLIGATGSGKSTFAKKWFGNAEIVSSDRCREMVSNSENTKDASADAFDLLYYIVGKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHEGN 131
K+G +D N+ E R + V L + H A+V++LP K+C++R+ R + +
Sbjct: 70 KRGLLTVVDATNVRSEDRKNLVALAR---EYHTLPVAIVMNLPDKVCLARNEMRTDR--S 124
Query: 132 LQGGKAAAVVNRMLQKKELPKL-SEGFSRITLCQNENDVQA 171
L G ++ + K+ + KL +EGF +I E +V A
Sbjct: 125 LAGHLVTNHIHAL--KRGIGKLKTEGFRKIFEFHTEAEVAA 163
>gi|429090979|ref|ZP_19153681.1| Macro domain, possibly ADP-ribose binding module [Cronobacter
dublinensis 1210]
gi|426744634|emb|CCJ79794.1| Macro domain, possibly ADP-ribose binding module [Cronobacter
dublinensis 1210]
Length = 180
Score = 48.5 bits (114), Expect = 0.011, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 45/89 (50%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDITR+ T +VI NAAN L GGGGV+ AI AAGPAL A ++ P
Sbjct: 10 GDITRIDT------DVIVNAANPSLM-GGGGVDGAIHRAAGPALLAACKVVRQQQGECQP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI G V+H +GP
Sbjct: 63 GHAVITE-------AGNLAAKAVVHTVGP 84
>gi|221104491|ref|XP_002168446.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase-like
[Hydra magnipapillata]
Length = 407
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 8/142 (5%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
++I VG+P +GKS F ++ + + + + +DT+ T +C++ A +LK KSV
Sbjct: 254 MIIFVGSPAAGKSFFAKNYLE--PKLYVIVNRDTLK-----TIEKCISLAEESLKNKKSV 306
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N +E R F+ L V V P +L ++ R G
Sbjct: 307 VIDNTNPSKEARKVFINLAKKYNVSVRCFYFQTPLELAHHLNMFRQVVSGGTIRRVPDVG 366
Query: 141 VNRMLQKKELPKLSEGFSRITL 162
N K + P EGF IT+
Sbjct: 367 FNTFKSKFQPPTKEEGFEIITI 388
>gi|395324119|gb|EJF56566.1| hypothetical protein DICSQDRAFT_71281 [Dichomitus squalens LYAD-421
SS1]
Length = 327
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 18/161 (11%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
+ +++++VG SGK+TF + + R + + R QD + +S V+ L S L +G
Sbjct: 24 QNVVLMLVGLIASGKTTFSQALERHFPK-FRRCSQDDLGDRRS---VEALVRRS--LGEG 77
Query: 79 KSVFLDRCNLEREQ----------RTDFVKLGG--PEVDVHAVVLDLPAKLCISRSVKRI 126
SV +DR N + Q R+ ++ + P +V D P ++C +R R
Sbjct: 78 LSVVIDRANFDERQARTPDTICAARSTWINIAREFPGTAAWIIVFDTPYEVCAARLADRK 137
Query: 127 EHEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNEN 167
+H V+ R P EG+SRI + ++
Sbjct: 138 DHPTITTPELGLQVLERFKLLYRSPSPHEGYSRILYLKPDD 178
>gi|396461227|ref|XP_003835225.1| hypothetical protein LEMA_P045660.1 [Leptosphaeria maculans JN3]
gi|312211776|emb|CBX91860.1| hypothetical protein LEMA_P045660.1 [Leptosphaeria maculans JN3]
Length = 522
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 15/155 (9%)
Query: 22 LVIMVGAPGSGKSTF-CEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+V+ G+PG+GKS+F +H+ + + R+ QD + T+ +C+ +A++ L++G S
Sbjct: 290 VVLFCGSPGAGKSSFYWKHLQPLN---YGRVNQDILK-----TREKCVRAATTLLEQGTS 341
Query: 81 VFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKR---IEHEGNLQGGK 136
V +D N + E R ++ L ++ + V+ P ++C R I E N + K
Sbjct: 342 VVVDNTNADPETRAIWINLARKLKIPIRCVLFTAPVQVCQHNDAFRASNIGQETNPEKRK 401
Query: 137 A--AAVVNRMLQKKELPKLSEGFSRITLCQNENDV 169
A + + P SEGF+ I E +
Sbjct: 402 MLPQAAFSGFASRYREPTRSEGFADIITTAFEARI 436
>gi|429082267|ref|ZP_19145352.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Cronobacter condimenti 1330]
gi|426549007|emb|CCJ71393.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Cronobacter condimenti 1330]
Length = 180
Score = 48.5 bits (114), Expect = 0.011, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 46/89 (51%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDITR+ T +VI NAAN L GGGGV+ AI AAGPAL A ++ P
Sbjct: 10 GDITRIDT------DVIVNAANPSLM-GGGGVDGAIHRAAGPALLAACKVVRQQQGECQP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI G V V+H +GP
Sbjct: 63 GHAVITE-------AGDLPVKAVVHTVGP 84
>gi|403299288|ref|XP_003940421.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase [Saimiri
boliviensis boliviensis]
Length = 521
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKS+F + + S+ + + +DT+ G+ +C+T+ ALK+GK V
Sbjct: 367 VVVAVGFPGAGKSSFLKEHLVSAG--YVHVNRDTL-----GSWQRCVTACEMALKQGKRV 419
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +V+ V A L +R R + + VV
Sbjct: 420 AIDNTNPDASSRARYVQCAR-AAGVPCRCFLFTATLEQARHNNRFREMTDSSHAPVSDVV 478
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGF+ I
Sbjct: 479 MYGYRKQFEAPTLAEGFAAI 498
>gi|220909902|ref|YP_002485213.1| metallophosphoesterase [Cyanothece sp. PCC 7425]
gi|219866513|gb|ACL46852.1| metallophosphoesterase [Cyanothece sp. PCC 7425]
Length = 859
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKSTF RS+ + C+ D ++ S L A+ L
Sbjct: 10 LVVLIGASGSGKSTFARQHFRSTEILSSDYCRGLVSDDETDQSASRDAFDVLHYIAAKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHEGN 131
G+ +D N++ E R + L H A+VL+LP LC R+ +R + +
Sbjct: 70 GAGRLTVVDATNVQTEDRKPLLDLAR---QYHCFPVAIVLNLPESLCHERNQQRADRQF- 125
Query: 132 LQGGKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQA 171
VV R Q ++ L L EGF I + + ++QA
Sbjct: 126 -----GPHVVRRHSQNLRRSLHTLEREGFRYIYVLSSLEEIQA 163
>gi|418472389|ref|ZP_13042130.1| phosphatase [Streptomyces coelicoflavus ZG0656]
gi|371546999|gb|EHN75418.1| phosphatase [Streptomyces coelicoflavus ZG0656]
Length = 860
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKSTF + + + C+ D ++ S L A L
Sbjct: 30 LVVLIGASGSGKSTFARRHFKPTEVISSDFCRGLVADDENDQSASRDAFDVLHYIAGKRL 89
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D N++++ R + L + DV AVVLD+P ++C R+ R +
Sbjct: 90 AAGRRTVVDATNVQQDARRQLIDL-ARKYDVLPIAVVLDVPEQICAERNAGRTDR----- 143
Query: 134 GGKAAAVVNRMLQK--KELPKL-----SEGFSRITLCQNENDVQAA 172
A + R++Q+ +EL + EGF ++ + + E +++ A
Sbjct: 144 ----ADMPRRVIQRHTRELRRSLRHLEREGFRKVHVLRGEAEIEHA 185
>gi|169830095|ref|YP_001700253.1| kinase-like protein [Lysinibacillus sphaericus C3-41]
gi|168994583|gb|ACA42123.1| kinase-like protein [Lysinibacillus sphaericus C3-41]
Length = 325
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 18/158 (11%)
Query: 15 EKKWKQILVIMVGAPGSGKSTFCEH-------VMRSSARPWARICQDTINKGKSGTKVQC 67
EK+ K ++ VG PGSGKSTF + V+ SS + D K KS +
Sbjct: 5 EKEMK--VIFTVGLPGSGKSTFVKQLAKKENAVVLSSDAIRQELFGDA-TKQKSRQVFRT 61
Query: 68 LTSASSAL-KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRI 126
L + L KG +V +D N+ERE+R + V D P +C++R+ +R
Sbjct: 62 LYERLNDLVAKGYTVIVDATNIERERRIFALGKLPTSVRKECYYFDTPYSICVARNQQR- 120
Query: 127 EHEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQ 164
+ V+ +M + E P + EGF + +
Sbjct: 121 ------KRNVPLVVMEKMSKHLEFPTVGEGFDEVHIVH 152
>gi|379057749|ref|ZP_09848275.1| bis(5'-nucleosyl)-tetraphosphatase [Serinicoccus profundi MCCC
1A05965]
Length = 840
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 12/158 (7%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++G GSGKSTF ++ + C+ D ++ + L + L
Sbjct: 17 LVVLIGVSGSGKSTFARTHFAATEVLSSDFCRGLVANDENDQSATPDAFDVLHYIVGTRL 76
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
++G +D N++R R V L +V V A+VLD+P + R+ R + + G
Sbjct: 77 RRGLLTVVDATNVQRAARASLVTLAKSHDVLVDAIVLDVPESAAVERNAARPDRD---FG 133
Query: 135 GKAAAVVNRMLQKKELPKL-SEGFSRITLCQNENDVQA 171
A +R LQ+ L KL EGF R+ + + +V A
Sbjct: 134 RHVIARQHRDLQRS-LGKLRKEGFRRVHVLRGTEEVDA 170
>gi|395751581|ref|XP_002829632.2| PREDICTED: bifunctional polynucleotide phosphatase/kinase [Pongo
abelii]
Length = 521
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+T+ +ALK+GK V
Sbjct: 367 VVVAVGFPGAGKSTFLKKHLVSAG--YVHVNRDTL-----GSWQRCVTTCETALKQGKRV 419
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +V+ V A L +R R + + +V
Sbjct: 420 AIDNTNPDAASRGRYVQCAR-AAGVPCRCFLFTATLEQARHNNRFREMTDSSHVPVSDMV 478
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGFS I
Sbjct: 479 MYGYRKQFEAPTLAEGFSAI 498
>gi|350561653|ref|ZP_08930491.1| Appr-1-p processing domain protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349780685|gb|EGZ35003.1| Appr-1-p processing domain protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 179
Score = 48.1 bits (113), Expect = 0.012, Method: Composition-based stats.
Identities = 39/97 (40%), Positives = 47/97 (48%), Gaps = 20/97 (20%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGN 408
VGDITR L + I NAAN +L+P GGGV AI AAGP L+ A + PG
Sbjct: 15 VGDITR-----QLDMDAIVNAANAQLRP-GGGVAGAIHRAAGPGLDQECRPLA-PIAPGQ 67
Query: 409 SVIV---PLPSTSPLCGREGVTHVIHVLGPNMNPRRP 442
+VI LP+ HV+H LGP P
Sbjct: 68 AVITGGHDLPN----------RHVVHCLGPVFGRDEP 94
>gi|326776006|ref|ZP_08235271.1| Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) [Streptomyces
griseus XylebKG-1]
gi|326656339|gb|EGE41185.1| Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) [Streptomyces
griseus XylebKG-1]
Length = 860
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 19/163 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKSTF + + + C+ D ++ S L A L
Sbjct: 28 LVVLIGASGSGKSTFARKHFKPTEIVSSDFCRGLVADDENDQSASRDAFDVLHYIAGKRL 87
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
+ G+ +D +++ E R V+L +V A+VLDLP ++C +R+ R + +
Sbjct: 88 EAGRLTVIDATSVQSESRKQLVQLARAYDVLPIAIVLDLPEEVCAARNADRPD-----RA 142
Query: 135 GKAAAVVNRMLQKKELPKL-----SEGFSRITLCQNENDVQAA 172
V+ R ++EL + EGF ++ + + E + ++A
Sbjct: 143 SMPRHVIQR--HRRELRRSLRGLEREGFRKVHVLRTEEEAESA 183
>gi|297191399|ref|ZP_06908797.1| phosphatase [Streptomyces pristinaespiralis ATCC 25486]
gi|297150903|gb|EDY66238.2| phosphatase [Streptomyces pristinaespiralis ATCC 25486]
Length = 853
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 19/163 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV++VGA GSGKSTF + + + C+ D ++ SG L L
Sbjct: 24 LVVLVGATGSGKSTFARRHFKPTEVISSDFCRGLVADDENDQSASGDAFDVLHYIVGKRL 83
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
G+ +D +++ E R V+L +V A+VLD+P +C R+ R + +
Sbjct: 84 AAGRLTVVDATSVQAESRRQLVQLARQHDVLPIAIVLDMPEDVCAERNAGRPD-----RA 138
Query: 135 GKAAAVVNRMLQKKELPKL-----SEGFSRITLCQNENDVQAA 172
G V++R ++EL + EGF ++ + + +V++A
Sbjct: 139 GMPRHVISR--HRRELRRSLRGLEREGFRKVHVLRTVEEVESA 179
>gi|260811388|ref|XP_002600404.1| hypothetical protein BRAFLDRAFT_284539 [Branchiostoma floridae]
gi|229285691|gb|EEN56416.1| hypothetical protein BRAFLDRAFT_284539 [Branchiostoma floridae]
Length = 471
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 10/107 (9%)
Query: 22 LVIMVGAPGSGKSTFCE-HVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+V+MV P GKSTFC+ H++ A + I +DT+ T+ +C + ALK GKS
Sbjct: 263 MVVMVALPAGGKSTFCKCHLV---AHGYTAINRDTLK-----TQAKCQQVSKDALKSGKS 314
Query: 81 VFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLP-AKLCISRSVKRI 126
V +D N + R +++ + V D+ +L + R +KR
Sbjct: 315 VVIDNTNSSKAARAEYITIAKKAGTVCLACWDVTNRRLHMIRRLKRF 361
>gi|421111790|ref|ZP_15572261.1| polynucleotide kinase-phosphatase [Leptospira santarosai str. JET]
gi|410802817|gb|EKS08964.1| polynucleotide kinase-phosphatase [Leptospira santarosai str. JET]
Length = 858
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 76/190 (40%), Gaps = 27/190 (14%)
Query: 22 LVIMVGAPGSGKSTFCEHVMR-----SSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV+++G GSGKS+F + + SS A + D N+ + L A L
Sbjct: 10 LVVLIGTSGSGKSSFAKKHFKKSEILSSDECRALVSDDENNQAATNDAFDVLYYIARKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHEGN 131
+ G +D N+ERE R ++L D H A++LD P K+C R+ R G
Sbjct: 70 QNGLLTVIDATNVERESRKGLIELSR---DYHCLPVAIILDTPNKVCEERNQNR---NGK 123
Query: 132 LQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAAL---------DTYSGLGPL 182
G R L+ EGF I + ++ ++ + D GP
Sbjct: 124 NFGSHVIHRQKRQLKSSIKSLKGEGFRHIYILKSVEEIDSVTAIIREKLYNDKKDISGPF 183
Query: 183 DTL--PHGSF 190
D + HG F
Sbjct: 184 DIIGDIHGCF 193
>gi|386845169|ref|YP_006263182.1| bis(5'-nucleosyl)- tetraphosphatase(asymmetrical) [Actinoplanes sp.
SE50/110]
gi|359832673|gb|AEV81114.1| bis(5'-nucleosyl)- tetraphosphatase(asymmetrical) [Actinoplanes sp.
SE50/110]
Length = 830
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 81/183 (44%), Gaps = 26/183 (14%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSS---ARPWAR--ICQDTINKGKSGTKVQCLTS-ASSAL 75
LV +VG GSGKSTF S+ + + R I D ++ S L A L
Sbjct: 9 LVALVGISGSGKSTFARSHFASTQVLSSDFFRGLIADDENDQAASAEAFDALHYIAGKRL 68
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D NL+ R +KL E DV A+VLD+P L R+ R + Q
Sbjct: 69 AAGRLTVVDATNLQSHGRAALIKL-AREHDVLPVAIVLDVPEALAWERTQARPDRTFGRQ 127
Query: 134 GGKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAALDTYSGL--------GPL 182
VV+RM + ++ L +L+ EGF ++ + + ++ AA Y L GP
Sbjct: 128 ------VVSRMHRDLRRSLGQLAREGFRKVHVLRGPEEIAAAEIRYEKLFNDRRDEHGPF 181
Query: 183 DTL 185
D +
Sbjct: 182 DIV 184
>gi|182435367|ref|YP_001823086.1| serine/threonine protein phosphatase [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178463883|dbj|BAG18403.1| putative serine/threonine protein phosphatase [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 860
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 19/163 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKSTF + + + C+ D ++ S L A L
Sbjct: 28 LVVLIGASGSGKSTFARKHFKPTEIVSSDFCRGLVADDENDQSASRDAFDVLHYIAGKRL 87
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
+ G+ +D +++ E R V+L +V A+VLDLP ++C +R+ R + +
Sbjct: 88 EAGRLTVIDATSVQSESRKQLVQLARAYDVLPIAIVLDLPEEVCAARNAARPD-----RA 142
Query: 135 GKAAAVVNRMLQKKELPKL-----SEGFSRITLCQNENDVQAA 172
V+ R ++EL + EGF ++ + + E + ++A
Sbjct: 143 SMPRHVIQR--HRRELRRSLRGLEREGFRKVHVLRTEEEAESA 183
>gi|398815429|ref|ZP_10574098.1| putative kinase [Brevibacillus sp. BC25]
gi|398034606|gb|EJL27867.1| putative kinase [Brevibacillus sp. BC25]
Length = 320
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 35/202 (17%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVM---RSSARPWARICQDTI---NKGKSGTKV--QCLTS 70
K+ L+++ G GSGKS + + + R++ I Q+ K K +V + +
Sbjct: 2 KKKLIVLSGIVGSGKSKWAQEIAKKERATIVSTDEIRQNLFGDERKQKKSAQVFFEVYSK 61
Query: 71 ASSALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEG 130
++ L GK+V LD N++RE+R V P+V +D+P +C+ R+ R
Sbjct: 62 IATELANGKNVILDATNIDREKRMK-VLAKFPDVQKECYYVDVPYSVCLERNRSR----- 115
Query: 131 NLQGGKAAAVVNRMLQKKELPKLSEGFSRI-----------------TLCQNENDVQAAL 173
+ +V +M + P +EG+ I L QNE +
Sbjct: 116 --KRTVDEYIVAKMRKNFHFPIKNEGWDHIHLLHEPVPYAIEKEEFVQLLQNEPSYEELF 173
Query: 174 DTYSGLGPLDTLPHGSFGQKNP 195
D + + + F Q+NP
Sbjct: 174 DRLNAIPIFKEM--YQFNQENP 193
>gi|119467986|ref|XP_001257799.1| hypothetical protein NFIA_052470 [Neosartorya fischeri NRRL 181]
gi|119405951|gb|EAW15902.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
Length = 442
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 11/143 (7%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI G+PG+GKSTF + + + R+ QD + T+ +C+ A L G SV
Sbjct: 285 LVIFCGSPGAGKSTFYWNHLEPLG--YERVNQDNLK-----TRQKCIKVAKEFLAAGSSV 337
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKA--- 137
+D N + R ++V++ V + V +LC + R + +A
Sbjct: 338 VVDNTNADPNTRAEWVRVAKEFNVPIRCVYFTSSPELCKHNNAVRAANRALNPESRAPLP 397
Query: 138 AAVVNRMLQKKELPKLSEGFSRI 160
L++ + P + EGFS I
Sbjct: 398 GIAFGDFLKRFKEPTMEEGFSDI 420
>gi|401880850|gb|EJT45161.1| hypothetical protein A1Q1_06478 [Trichosporon asahii var. asahii
CBS 2479]
Length = 365
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 57 NKGKSGTKVQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPA 115
++ SG + + S +AL G++V +DR N + QR F+ + ++VL P
Sbjct: 72 DESASGRRQEVEASVRAALLAGQNVIVDRVNFDPTQRGHFLAIAQQTGARPLSIVLKAPF 131
Query: 116 KLCISRSVKRIEHEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNEND 168
+ R + R +H A V+ RM ++ P+ EGF R+ +E D
Sbjct: 132 DILRQRLLDRTDHPTLKDSETALKVLGRMRRELVYPQTYEGFQRVLFVDSEGD 184
>gi|429104032|ref|ZP_19166006.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Cronobacter turicensis 564]
gi|426290681|emb|CCJ92119.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Cronobacter turicensis 564]
Length = 180
Score = 48.1 bits (113), Expect = 0.014, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 45/89 (50%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDITR+ T +VI NAAN L GGGGV+ AI AAGPAL A ++ P
Sbjct: 10 GDITRIDT------DVIVNAANPSLM-GGGGVDGAIHRAAGPALLAACKVVRQQQGECQP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI G VIH +GP
Sbjct: 63 GHAVITE-------AGDLAAKAVIHTVGP 84
>gi|406697258|gb|EKD00523.1| hypothetical protein A1Q2_05188 [Trichosporon asahii var. asahii
CBS 8904]
Length = 396
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 57 NKGKSGTKVQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPA 115
++ SG + + S +AL G++V +DR N + QR F+ + ++VL P
Sbjct: 72 DESASGRRQEVEASVRAALLAGQNVIVDRVNFDPTQRGHFLAIAQQTGARPLSIVLKAPF 131
Query: 116 KLCISRSVKRIEHEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNEND 168
+ R + R +H A V+ RM ++ P+ EGF R+ +E D
Sbjct: 132 DILRQRLLDRTDHPTLKDSETALKVLGRMRRELVYPQTYEGFQRVLFVDSEGD 184
>gi|291454810|ref|ZP_06594200.1| serine/threonine protein phosphatase [Streptomyces albus J1074]
gi|291357759|gb|EFE84661.1| serine/threonine protein phosphatase [Streptomyces albus J1074]
Length = 859
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKSTF + + + C+ D ++ S L A L
Sbjct: 25 LVVLIGATGSGKSTFAARHFKPTEVLSSDFCRGLVADDENDQSASTDAFDVLHHIAGKRL 84
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
G+ +D +++RE R V L +V AVVLDLP ++C R+ R + G +
Sbjct: 85 AAGRLTVVDATSVQRESRRQLVDLARRHDVLPVAVVLDLPEEVCAERNAARPDRAGVNR- 143
Query: 135 GKAAAVVNRMLQKKELPKLSEGFSRITLCQNEND 168
+ A R L++ EGF ++ + +++ +
Sbjct: 144 -RVIARHRRELRRSLKGLEREGFRKVHVLRSQQE 176
>gi|359148263|ref|ZP_09181444.1| serine/threonine protein phosphatase [Streptomyces sp. S4]
Length = 859
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKSTF + + + C+ D ++ S L A L
Sbjct: 25 LVVLIGATGSGKSTFAARHFKPTEVLSSDFCRGLVADDENDQSASTDAFDVLHHIAGKRL 84
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
G+ +D +++RE R + L +V AVVLDLP ++C R+ R + G +
Sbjct: 85 AAGRLTVVDATSVQRESRRQLIDLARRHDVLPVAVVLDLPEEVCAERNAARPDRAGVHR- 143
Query: 135 GKAAAVVNRMLQKKELPKLSEGFSRITLCQNEND 168
+ A R L++ EGF ++ + +++ +
Sbjct: 144 -RVIARHRRELRRSLKGLEREGFRKVHVLRSQQE 176
>gi|358338185|dbj|GAA27765.2| bifunctional polynucleotide phosphatase/kinase, partial [Clonorchis
sinensis]
Length = 451
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+++MVG P SGKS FC ++ A + +++ GT +C+ + A+ + SV
Sbjct: 237 IILMVGYPASGKSYFCRKML-------APLGYTVVSRDVLGTWQKCVKACEEAVARLTSV 289
Query: 82 FLDRCNLEREQRTDFVKLG 100
+D N++RE R ++K+
Sbjct: 290 AVDNTNMDRESRARYIKIA 308
>gi|157103380|ref|XP_001647953.1| polynucleotide kinase- 3'-phosphatase [Aedes aegypti]
gi|108884176|gb|EAT48401.1| AAEL000527-PA, partial [Aedes aegypti]
Length = 507
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 23/148 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
++IM+G PGSGKS H +++ P + +IN+ G+ +C + S L+ GK
Sbjct: 351 VIIMIGFPGSGKS----HFVKNHLEPKGYV---SINRDTLGSWQKCTSLLESTLRSGKRA 403
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAK-LCISRSVKRIEHEGNLQ--GGKAA 138
+D N + E R FV++ A + +P + +S S K+ +H + +
Sbjct: 404 VVDNTNPDAESRKRFVEI--------AKKMKVPCRCFKMSASYKQAKHNNAFRELTNRNH 455
Query: 139 AVVNRML-----QKKELPKLSEGFSRIT 161
A +N M+ K + P EGF I
Sbjct: 456 ASINDMVFNMYKSKYQEPTKEEGFEEIV 483
>gi|291526296|emb|CBK91883.1| Predicted kinase [Eubacterium rectale DSM 17629]
Length = 162
Score = 48.1 bits (113), Expect = 0.015, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 19 KQILVIMVGAPGSGKSTFCEH----VMRSSARPWARIC---QDTINKGKSGTKVQCLTSA 71
K + ++VG P SGKS+ + ++RSS ++C D N G T +Q L A
Sbjct: 5 KPVFYMLVGLPASGKSSESDRLGDVIVRSSDYLRDKLCGDINDMKNNGAVFTVLQSLVRA 64
Query: 72 SSALKKGKSVFLDRCNLEREQRTDFV-KLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEG 130
L GK V D NL+ R +F+ L + V +D P ++C+ R+ +R
Sbjct: 65 D--LYHGKDVVYDATNLKASYRVEFLDTLRLLKCKKVCVFVDTPFEVCVKRNEER----- 117
Query: 131 NLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNEND 168
++RM + E P +EG+ I + +N N+
Sbjct: 118 --DRTVPKEAMDRMKRFLEPPTFAEGWDEIRVVKNWNE 153
>gi|308462621|ref|XP_003093592.1| hypothetical protein CRE_02638 [Caenorhabditis remanei]
gi|308249609|gb|EFO93561.1| hypothetical protein CRE_02638 [Caenorhabditis remanei]
Length = 364
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 9/141 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+++MVG PGSGKSTF M + + + +DT+ GT +C+ + S LK G SV
Sbjct: 209 IIVMVGFPGSGKSTFAR--MLAEQNGYKIVNRDTL-----GTWQKCVAAVRSHLKNGDSV 261
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D + + E R+ +V + E + + ++ R N G+ +++V
Sbjct: 262 IIDNTSPDVESRSRYVGVAS-ETSTACRCFVMKCGMEHAQHNLRYRTLTNDGAGEISSMV 320
Query: 142 NRMLQKKEL-PKLSEGFSRIT 161
R+ + K + P EGF +I
Sbjct: 321 LRIHKGKYVEPTKEEGFQQIV 341
>gi|383411207|gb|AFH28817.1| bifunctional polynucleotide phosphatase/kinase [Macaca mulatta]
Length = 521
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 23/147 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+T+ +ALK+GK V
Sbjct: 367 VVVAVGFPGAGKSTFLKKHLVSAG--YVHVNRDTL-----GSWQRCVTACETALKQGKRV 419
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAK-LCISRSVKRIEHEGNLQGGKAAA- 139
+D N + R +V+ A P + + ++++ H + ++
Sbjct: 420 AIDNTNPDSASRARYVQC--------ARAASFPCRCFLFTATLEQARHNNRFREMTDSSH 471
Query: 140 ------VVNRMLQKKELPKLSEGFSRI 160
V+ ++ E P L+EGFS I
Sbjct: 472 IPVSDMVMYGYRKQFEAPTLAEGFSAI 498
>gi|317143180|ref|XP_001819298.2| polynucleotide kinase- 3'-phosphatase [Aspergillus oryzae RIB40]
Length = 434
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI G+PG+GKSTF + + R+ QD + T+ +C+ A L G+SV
Sbjct: 277 LVIFCGSPGAGKSTFYWDYLEPLG--YERVNQDILK-----TRPKCIKVAKEHLTAGRSV 329
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEG------NLQG 134
+D N + E R+ ++++ + + V LC + R ++ L
Sbjct: 330 VVDNTNADPETRSHWIEIAKEYSIPIRCVYFSASPALCRHNNAVRAANKSLNPESRALLP 389
Query: 135 GKAAAVVNRMLQKKELPKLSEGFSRI 160
G A R ++ P ++EGF I
Sbjct: 390 GIAFGDFGRRFKE---PTMAEGFKDI 412
>gi|116620126|ref|YP_822282.1| kinase-like protein [Candidatus Solibacter usitatus Ellin6076]
gi|116223288|gb|ABJ81997.1| kinase-like protein [Candidatus Solibacter usitatus Ellin6076]
Length = 143
Score = 47.8 bits (112), Expect = 0.016, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 17/149 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRS--SARPWARICQDTINKGKSGTKVQCLTSASSALKK-- 77
+V++VG PGSGKST+ E + + S+ ++ D ++ V+ + L++
Sbjct: 3 IVVLVGLPGSGKSTYLERIGATGLSSDAVRKLLAD--DESDQTIHVRVFQTIRYLLEQRL 60
Query: 78 --GKSV-FLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ V ++D +L E+R ++++G +V AV D+P +C+ R+ +R +
Sbjct: 61 EIGRPVTYIDATSLTAEERAPYIEIGRAHGCEVEAVFFDVPLAVCLERNAQR----PRVV 116
Query: 134 GGKAAAVVNRMLQKKELPKLSEGFSRITL 162
+A A +M K P EGF+R+T+
Sbjct: 117 PLEAMA---KMAAKLVPPMGEEGFTRVTV 142
>gi|404493680|ref|YP_006717786.1| O-acetyl-ADP-ribose deacetylase [Pelobacter carbinolicus DSM 2380]
gi|77545715|gb|ABA89277.1| O-acetyl-ADP-ribose deacetylase [Pelobacter carbinolicus DSM 2380]
Length = 175
Score = 47.8 bits (112), Expect = 0.017, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 50/113 (44%), Gaps = 17/113 (15%)
Query: 348 FVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPG 407
VGDITRL + I NAAN L GGGGV+ AI AAGP L E +SL
Sbjct: 12 LVGDITRLEV------DAIVNAANRSLL-GGGGVDGAIHRAAGPRL----VEECRSLNGC 60
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP--NMNPRRPNCLDGDYVKGCEILRK 458
+ + L R HVIH +GP P P L Y E+ R+
Sbjct: 61 ETGDAKITDGYDLPAR----HVIHTVGPVYRGRPNDPKLLASCYRTSLELARQ 109
>gi|391863547|gb|EIT72855.1| polynucleotide kinase 3' phosphatase [Aspergillus oryzae 3.042]
Length = 434
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI G+PG+GKSTF + + R+ QD + T+ +C+ A L G+SV
Sbjct: 277 LVIFCGSPGAGKSTFYWDYLEPLG--YERVNQDILK-----TRPKCIKVAKEHLTAGRSV 329
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEG------NLQG 134
+D N + E R+ ++++ + + V LC + R ++ L
Sbjct: 330 VVDNTNADPETRSHWIEIAKEYSIPIRCVYFSASPALCRHNNAVRAANKSLNPESRALLP 389
Query: 135 GKAAAVVNRMLQKKELPKLSEGFSRI 160
G A R ++ P ++EGF I
Sbjct: 390 GIAFGDFGRRFKE---PTMAEGFKDI 412
>gi|345851743|ref|ZP_08804709.1| phosphatase [Streptomyces zinciresistens K42]
gi|345636810|gb|EGX58351.1| phosphatase [Streptomyces zinciresistens K42]
Length = 847
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 17/162 (10%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV++VGA GSGKSTF + + + C+ D ++G + L A L
Sbjct: 17 LVVLVGASGSGKSTFARRHFKPTEVISSDFCRGLVSDDENDQGATRDAFDVLYYIAGKRL 76
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D +++++ R ++L DV A+VLD+P ++C R+ R + +
Sbjct: 77 AAGRRTVVDATSVQQDSRRQLIEL-AKRYDVLPIAIVLDVPEEVCAERNAARAD-----R 130
Query: 134 GGKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAA 172
VV R ++ ++ L L EGF ++ + + DV+ A
Sbjct: 131 ADLPRRVVQRHVRELRRSLRGLEREGFRKVHVLRGAADVENA 172
>gi|380789927|gb|AFE66839.1| bifunctional polynucleotide phosphatase/kinase [Macaca mulatta]
Length = 521
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+T+ +ALK+GK V
Sbjct: 367 VVVAVGFPGAGKSTFLKKHLVSAG--YVHVNRDTL-----GSWQRCVTACETALKQGKRV 419
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +V+ A L +R R + + +V
Sbjct: 420 AIDNTNPDSASRARYVQCAR-SAGFPCRCFLFTATLEQARHNNRFREMTDSSHVPVSDMV 478
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGFS I
Sbjct: 479 MYGYRKQFEAPTLAEGFSAI 498
>gi|307177052|gb|EFN66323.1| Probable multidrug resistance-associated protein lethal(2)03659
[Camponotus floridanus]
Length = 1861
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 6 DDTCK-AKDEEKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTK 64
DD CK A + +Q +++MVG+PGSGKS F ++ ++ + + +DT+ G+
Sbjct: 370 DDVCKPANAKLMLQQQEMILMVGSPGSGKSHFAKNYLKE----YGHVNRDTL-----GSW 420
Query: 65 VQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKL 99
+C+ + L +GKSV +D N + R + ++
Sbjct: 421 QKCIAAVEQYLNQGKSVVIDNTNPDPTSRQRYTEI 455
>gi|440793164|gb|ELR14356.1| DNA 3'phosphatase [Acanthamoeba castellanii str. Neff]
Length = 642
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 24/150 (16%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q LV+ VG P SGKSTF E + R+ QD + +K +CL + + AL +G
Sbjct: 484 QELVVFVGFPASGKSTFAERYFVPEG--YVRVNQDMLK-----SKDRCLRACAQALDEGS 536
Query: 80 SVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAK---LCISRSV-KRIEH-EGNLQG 134
SV +D N R +++ L A LPA+ S+ V K + H L
Sbjct: 537 SVVIDNTNPSPAVRAEYLAL--------AKKRGLPARCFYFATSKDVAKHLNHFRERLTD 588
Query: 135 GKAAAV----VNRMLQKKELPKLSEGFSRI 160
G+ V N + + PK SEGF+ +
Sbjct: 589 GERRHVPDMGYNIYAKNFKEPKPSEGFTEV 618
>gi|428317678|ref|YP_007115560.1| Polynucleotide 5'-hydroxyl-kinase [Oscillatoria nigro-viridis PCC
7112]
gi|428241358|gb|AFZ07144.1| Polynucleotide 5'-hydroxyl-kinase [Oscillatoria nigro-viridis PCC
7112]
Length = 291
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 13/121 (10%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTK---------VQCL-TSA 71
++++VG P SGKS F ++ S W R +D + + + VQ T
Sbjct: 13 VIVLVGLPASGKSQFARELLLSEPAKWVRSNKDLLREMAHASHWSPANEKFIVQLRDTII 72
Query: 72 SSALKKGKSVFLDRCNL--EREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHE 129
AL+ GK V +D N E + VK G V+V+ L +P + CI R +KR+
Sbjct: 73 LMALESGKHVIVDDTNFGPHIEHIKELVK-GKAVVEVNDSFLQVPVEECIKRDLKRLNSV 131
Query: 130 G 130
G
Sbjct: 132 G 132
>gi|109125580|ref|XP_001115581.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase-like
isoform 4 [Macaca mulatta]
Length = 521
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 23/147 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+T+ +ALK+GK V
Sbjct: 367 VVVAVGFPGAGKSTFLKKHLVSAG--YVHVNRDTL-----GSWQRCVTACETALKQGKRV 419
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAK-LCISRSVKRIEHEGNLQGGKAAA- 139
+D N + R +V+ A P + + ++++ H + ++
Sbjct: 420 AIDNTNPDSASRARYVQC--------ARAAGFPCRCFLFTATLEQARHNNRFREMTDSSH 471
Query: 140 ------VVNRMLQKKELPKLSEGFSRI 160
V+ ++ E P L+EGFS I
Sbjct: 472 VPVSDMVMYGYRKQFEAPTLAEGFSAI 498
>gi|346318949|gb|EGX88551.1| DNA kinase/phosphatase Pnk1 [Cordyceps militaris CM01]
Length = 470
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 15 EKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSA 74
EKK ++ +V+ G PG+GKSTF + +AR+ QDT+ T+ +CL +A
Sbjct: 306 EKKNEKEIVVFCGRPGAGKSTFYWTQLEPLG--YARVNQDTLK-----TREKCLQAAKEF 358
Query: 75 LKKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLC 118
L G SV +D N + R ++ L V V V PA +C
Sbjct: 359 LDDGCSVAVDNTNADAATRKIWIDLAQSFGVPVRCVSFTTPAAVC 403
>gi|121709962|ref|XP_001272597.1| polynucleotide kinase- 3'-phosphatase [Aspergillus clavatus NRRL 1]
gi|119400747|gb|EAW11171.1| polynucleotide kinase- 3'-phosphatase [Aspergillus clavatus NRRL 1]
Length = 436
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 19/147 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
L++ G+P +GKSTF ++ + R+ QD + T+ +CL A L G SV
Sbjct: 279 LILFCGSPAAGKSTFYWTHLQPLG--YERVNQDLLK-----TRQKCLKVARETLAAGSSV 331
Query: 82 FLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRI-------EHEGNLQ 133
+D N + R +++ L + + V P LC + R E L
Sbjct: 332 VVDNTNADAGTRAEWISLARDMHIPIRCVYFTSPPDLCRHNAAVRAANRTLNPESRARLP 391
Query: 134 GGKAAAVVNRMLQKKELPKLSEGFSRI 160
G L++ P L EGFS I
Sbjct: 392 G----VAFGDFLRRFREPTLDEGFSEI 414
>gi|332017214|gb|EGI58002.1| Bifunctional polynucleotide phosphatase/kinase [Acromyrmex
echinatior]
Length = 483
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 75/163 (46%), Gaps = 26/163 (15%)
Query: 7 DTCKAKDEEKKWKQI-LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKV 65
D C D E KQ +++MVG+PGSGKS H ++ + + + +DT+ G+
Sbjct: 313 DICNPADAELTLKQQEMILMVGSPGSGKS----HFTKNHLKEYGYVNRDTL-----GSWQ 363
Query: 66 QCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAK-LCISRSVK 124
+C+ + L + SV +D N ++ R ++++ A ++P + ++ S++
Sbjct: 364 KCIAAVQQYLNERNSVVVDNTNPDKASRERYMEV--------AKKCNVPIRCFVMTTSLE 415
Query: 125 RIEHEGNLQGGKAAA-------VVNRMLQKKELPKLSEGFSRI 160
+H + + +++ ++ + P L EGF I
Sbjct: 416 HAKHNNKFRELTDPSHTPINDIIIHSYMKNYKPPTLEEGFKEI 458
>gi|334118136|ref|ZP_08492226.1| Polynucleotide 5'-hydroxyl-kinase [Microcoleus vaginatus FGP-2]
gi|333460121|gb|EGK88731.1| Polynucleotide 5'-hydroxyl-kinase [Microcoleus vaginatus FGP-2]
Length = 282
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 13/121 (10%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTK---------VQCL-TSA 71
++++VG P SGKS F ++ S W R +D + + + VQ T
Sbjct: 4 VIVLVGLPASGKSQFARELLLSEPAKWVRSNKDLLREMAHASHWSPANEKFIVQLRDTII 63
Query: 72 SSALKKGKSVFLDRCNL--EREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHE 129
AL+ GK V +D N E + VK G V+V+ L +P + CI R +KR+
Sbjct: 64 LMALESGKHVIVDDTNFGPHIEHIKELVK-GKAVVEVNDSFLQVPVEECIKRDLKRLNSV 122
Query: 130 G 130
G
Sbjct: 123 G 123
>gi|449127570|ref|ZP_21763843.1| polynucleotide kinase-phosphatase [Treponema denticola SP33]
gi|448944303|gb|EMB25184.1| polynucleotide kinase-phosphatase [Treponema denticola SP33]
Length = 856
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 33/220 (15%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTSA-S 72
K LV++VG GSGKS+F + + IC+ D N+ + + S
Sbjct: 7 KTSLVLLVGVSGSGKSSFAQKHFEKYEIVSSDICRGIVSNDENNQSATNDAFEVFNFILS 66
Query: 73 SALKKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGN 131
L+ G D N+++E R + + V A+V DLP +LC R+ +R + +
Sbjct: 67 KRLQNGLLTVADATNIQQEARKKLLNIARSFHVLPVAIVFDLPQELCEKRNEERTDRK-- 124
Query: 132 LQGGKAAAVVNRMLQ--KKELPKL-SEGFSRITLCQNENDVQAAL---------DTYSGL 179
++ V+ +Q K L L EGF ++ + ++E +V + D
Sbjct: 125 ----ISSGVLRHQMQNLKHSLKNLKKEGFKKLYILRSEEEVNSVTEIIREKLYNDKTDMH 180
Query: 180 GPLDTL--PHGSFGQKNPDAKIQLGIMKFLKKVDAPSNTG 217
GP D + HG + D ++L + K K+D+ ++ G
Sbjct: 181 GPFDIIGDVHGCY-----DELVEL-LQKLNYKIDSVNDDG 214
>gi|390479281|ref|XP_003735684.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional polynucleotide
phosphatase/kinase [Callithrix jacchus]
Length = 540
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 11/141 (7%)
Query: 22 LVIMVGAPGSGKSTFC-EHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+V+ VG PG+GKS+F EH++ + + + +DT+ G+ +C+T+ ALK+GK
Sbjct: 375 VVVAVGFPGAGKSSFLREHLVSAG---YVHVNRDTL-----GSWQRCVTACEMALKQGKR 426
Query: 81 VFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
V +D N + R +V+ + V A L +R R + + +
Sbjct: 427 VAIDNTNPDAPSRARYVQCAR-AMGVPCRCFLFTATLEHARHNNRFREMTDSSHAPVSDM 485
Query: 141 VNRMLQKK-ELPKLSEGFSRI 160
V +K+ E P L+EGF+ I
Sbjct: 486 VMYGYRKQFEAPTLAEGFAAI 506
>gi|239991427|ref|ZP_04712091.1| putative serine/threonine protein phosphatase [Streptomyces
roseosporus NRRL 11379]
gi|291448424|ref|ZP_06587814.1| serine/threonine protein phosphatase [Streptomyces roseosporus NRRL
15998]
gi|291351371|gb|EFE78275.1| serine/threonine protein phosphatase [Streptomyces roseosporus NRRL
15998]
Length = 862
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 21/164 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKSTF + + + +C+ D ++ S L A L
Sbjct: 30 LVVLIGASGSGKSTFARKHFKPTEIVSSDVCRGLVADDENDQSASRDAFDVLHYIAGKRL 89
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
+ G+ +D +++ E R V+L + DV A+VLDLP ++C +R+ R + +
Sbjct: 90 EAGRLTVIDATSVQSESRKQLVQLAR-KYDVLPIAIVLDLPEEVCAARNAARPD-----R 143
Query: 134 GGKAAAVVNRMLQKKELPKL-----SEGFSRITLCQNENDVQAA 172
V+ R ++EL + EGF ++ + + E + +A
Sbjct: 144 ASMPRHVIQR--HRRELRRSLRGLEREGFRKVHVLRTEEEAGSA 185
>gi|393219915|gb|EJD05401.1| PNK3P-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 438
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+VI VG P SGK++ E + + + + QDT+ G++ +CL +A +A++KG S
Sbjct: 271 IVIFVGPPASGKTSLFESSFQPAG--YEHVNQDTL-----GSRPKCLKAAEAAIRKGVSC 323
Query: 82 FLDRCNLEREQRTDFVKLG 100
+D N +++ R +V L
Sbjct: 324 VVDNTNRDKKTRKYYVDLA 342
>gi|335290025|ref|XP_003127398.2| PREDICTED: bifunctional polynucleotide phosphatase/kinase [Sus
scrofa]
Length = 522
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 11/141 (7%)
Query: 22 LVIMVGAPGSGKSTFC-EHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+V+ VG PG+GKSTF EH++ + + + +DT+ G+ +C+T+ +ALK+ K
Sbjct: 368 VVVAVGFPGAGKSTFLREHLVSAG---YVHVNRDTL-----GSWQRCVTTCEAALKQRKR 419
Query: 81 VFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAA-A 139
V +D N + + R ++K + V A L +R R + +
Sbjct: 420 VVIDNTNPDLQSRARYIKCAR-DAGVPCRCFLFSASLEQARHNNRFREMTDPSHVPVSDI 478
Query: 140 VVNRMLQKKELPKLSEGFSRI 160
V+ Q+ E P L+EGF+ +
Sbjct: 479 VIYGYRQQFEAPTLAEGFAAV 499
>gi|82596598|ref|XP_726327.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481692|gb|EAA17892.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 441
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q L+I++G G GK+ C+ + + RI ++ + TK + + + ++ +GK
Sbjct: 279 QKLIILIGPSGCGKTFLCKFYFPN----YVRISEEEL-----KTKKKSINMLNESITQGK 329
Query: 80 SVFLDRCNLEREQRTDFV---KLGGPEVDVHAVVLDLPAKLCIS-RSVKRIEHEGNLQGG 135
+V +D NL ++ R ++ K ++++A+ + +L I + K + + N
Sbjct: 330 NVIIDNINLYKKNRAIYIDEAKKINKNINIYAIFFNYSKELTIHLNTFKLLTDKSNKIME 389
Query: 136 KAAAVVNRMLQKKELPKLSEGFSRITLCQNEN 167
++ + E P SE F+ I + ++N
Sbjct: 390 IPIIPIHSFFKYIESPSCSEHFNNIIVLNDQN 421
>gi|429199531|ref|ZP_19191283.1| Ser/Thr phosphatase family protein [Streptomyces ipomoeae 91-03]
gi|428664854|gb|EKX64125.1| Ser/Thr phosphatase family protein [Streptomyces ipomoeae 91-03]
Length = 872
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 25/166 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTIN---KGKSGTK--VQCLTS-ASSAL 75
LV+++GA GSGKSTF + + + C+ ++ +S TK L A L
Sbjct: 25 LVVLIGASGSGKSTFARRHFKPTEIISSDFCRGLVSDDENDQSATKDAFDVLHYIAGKRL 84
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D ++++E R + L + DV A+VLD+P ++C R+ R +
Sbjct: 85 AAGRRTVVDATSVQQEARRQLIDL-AKQYDVLPIAIVLDVPEEVCAERNAARTDR----- 138
Query: 134 GGKAAAVVNRMLQK--KELPKL-----SEGFSRITLCQNENDVQAA 172
A + R++Q+ +EL + EGF ++ + + D++ A
Sbjct: 139 ----ADMPRRVIQRHTRELRRSLRHLEREGFRKVHILRGVEDIENA 180
>gi|330841077|ref|XP_003292531.1| hypothetical protein DICPUDRAFT_6215 [Dictyostelium purpureum]
gi|325077227|gb|EGC30954.1| hypothetical protein DICPUDRAFT_6215 [Dictyostelium purpureum]
Length = 517
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+VI VG P SGKSTF + + + I QDT+ TK +C+ +A AL +GKS
Sbjct: 363 IVISVGFPASGKSTFAKKYFGPAN--YVIINQDTLK-----TKDKCIKAAKEALSQGKSC 415
Query: 82 FLDRCNLEREQRTDFVKLG 100
+D N + R +++ L
Sbjct: 416 IIDNTNYDINTRAEYLSLA 434
>gi|408390647|gb|EKJ70038.1| hypothetical protein FPSE_09775 [Fusarium pseudograminearum CS3096]
Length = 462
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 19/153 (12%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q +++ G PG+GKST ++ +ARI QD + T+ +C+ +A L++G
Sbjct: 303 QDIILFCGPPGAGKSTLYWKSLKPLG--YARINQDLLK-----TRDKCVQAAKEHLQEGT 355
Query: 80 SVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKR-----IEHEGNLQ 133
SV +D N + RT +V+L + + V P ++C + R + E L
Sbjct: 356 SVAIDNTNADPATRTVWVELAKEFGISIRCVWFKTPLQVCEHNNAVRALNESLNPESRLV 415
Query: 134 GGKAA--AVVNRMLQKKELPKLSEGFSRITLCQ 164
K A + NR + P + EGF I Q
Sbjct: 416 LPKMAFTSFANRF----KPPSVKEGFQDIIEVQ 444
>gi|374310492|ref|YP_005056922.1| polynucleotide kinase domain-containing protein [Granulicella
mallensis MP5ACTX8]
gi|358752502|gb|AEU35892.1| polynucleotide kinase domain protein [Granulicella mallensis
MP5ACTX8]
Length = 281
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 29/190 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWAR------ICQDTINKGKSGTKVQCLTSASSA- 74
+V+ +G PGSGK+T+ + R P + + D ++ G L S A
Sbjct: 109 VVLTIGLPGSGKTTWYK---RRGVTPLSSDMLRNILFDDITDQRYQGLVFSTLRSLLRAR 165
Query: 75 -LKKGKSVFLDRCNLEREQRTDFVKLG---GPEVDVHAVVLDLPAKLCISRSVKRIEHEG 130
+ K ++D NL +R ++K+ G +V AV D+P +C+ R+ KR
Sbjct: 166 LIAKMPWNYVDATNLSPHERRQWIKMAKSFG--YEVQAVFFDVPLAVCLERNSKRERQVT 223
Query: 131 NLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTLPHGSF 190
+ V+++M ++ P EGF +IT+ + + +A P P GS
Sbjct: 224 D-------EVMHKMAERLRPPVFKEGFDKITVVRVKGAAPSATPE-----PAAGQPQGS- 270
Query: 191 GQKNPDAKIQ 200
+ P+A ++
Sbjct: 271 AENTPEAAVE 280
>gi|302924867|ref|XP_003053985.1| hypothetical protein NECHADRAFT_90529 [Nectria haematococca mpVI
77-13-4]
gi|256734926|gb|EEU48272.1| hypothetical protein NECHADRAFT_90529 [Nectria haematococca mpVI
77-13-4]
Length = 456
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 26/142 (18%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ G PG+GKS+F ++ + R+ QD + ++ +C+ +A L++G+SV
Sbjct: 299 MVLFCGPPGAGKSSFYWKYLKPLG--YERVNQDLLK-----SRDKCVQAAREHLQEGRSV 351
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N + + RT +V+L + + V P LC EH A
Sbjct: 352 AIDNTNADPDTRTIWVELAKKFGISIRCVWFKTPIALC--------EH------NDAVRA 397
Query: 141 VNRMLQ---KKELPKLS-EGFS 158
+N+ L ++ LPKL+ GFS
Sbjct: 398 MNKSLNPESRQVLPKLAFSGFS 419
>gi|451846788|gb|EMD60097.1| hypothetical protein COCSADRAFT_175187 [Cochliobolus sativus
ND90Pr]
Length = 450
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 29/153 (18%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ G+PG+GKS+F ++ + R+ QD + T+ +C+ SA++ +++G SV
Sbjct: 291 MVLFCGSPGAGKSSFYWKHLQPLG--YERVNQDILK-----TREKCVKSATALIEEGTSV 343
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N + R +V L +V + V+ KLC EH +
Sbjct: 344 VIDNTNADPNTRAVWVALAQKLKVPLRCVLFTASPKLC--------EHNDTFRALNVGPE 395
Query: 141 VNR-------------MLQKKELPKLSEGFSRI 160
NR + PKL+EGF I
Sbjct: 396 TNRESRTILPHVAFSGFASRYREPKLTEGFVDI 428
>gi|365863597|ref|ZP_09403307.1| putative serine/threonine protein phosphatase [Streptomyces sp.
W007]
gi|364006957|gb|EHM27987.1| putative serine/threonine protein phosphatase [Streptomyces sp.
W007]
Length = 867
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 21/164 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKSTF + + + C+ D ++ S L A L
Sbjct: 35 LVVLIGASGSGKSTFAHKHFKPTEIVSSDFCRGLVADDENDQSASRDAFDVLHYIAGKRL 94
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
+ G+ +D +++ E R V+L E DV A+VLDLP ++C +R+ R + +
Sbjct: 95 EAGRLTVIDATSVQAESRKQLVQL-AREHDVLPIAIVLDLPEEVCAARNAARPD-----R 148
Query: 134 GGKAAAVVNRMLQKKELPKL-----SEGFSRITLCQNENDVQAA 172
V+ R ++EL + EGF ++ + + E + +A
Sbjct: 149 ASMPRHVIQR--HRRELRRSLRGLEREGFRKVHVLRTEEEAGSA 190
>gi|332856799|ref|XP_003316598.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase, partial
[Pan troglodytes]
Length = 484
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 7/77 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+T+ +ALK+GK V
Sbjct: 368 VVVAVGFPGAGKSTFLKKHLVSAG--YVHVNRDTL-----GSWQRCVTTCETALKQGKRV 420
Query: 82 FLDRCNLEREQRTDFVK 98
+D N + R +V+
Sbjct: 421 AIDNTNPDAASRARYVQ 437
>gi|260597416|ref|YP_003209987.1| RNase III inhibitor [Cronobacter turicensis z3032]
gi|334351224|sp|C9Y0V8.1|YMDB_CROTZ RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|260216593|emb|CBA29859.1| UPF0189 protein ymdB [Cronobacter turicensis z3032]
Length = 176
Score = 47.0 bits (110), Expect = 0.027, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 45/89 (50%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDITR+ T +VI NAAN L GGGGV+ AI AAGP+L A ++ P
Sbjct: 10 GDITRIDT------DVIVNAANPSLM-GGGGVDGAIHRAAGPSLLAACKVVRQQQGECQP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI G VIH +GP
Sbjct: 63 GHAVITE-------AGDLAAKAVIHTVGP 84
>gi|433608382|ref|YP_007040751.1| Appr-1-p processing domain protein [Saccharothrix espanaensis DSM
44229]
gi|407886235|emb|CCH33878.1| Appr-1-p processing domain protein [Saccharothrix espanaensis DSM
44229]
Length = 177
Score = 47.0 bits (110), Expect = 0.028, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 42/86 (48%), Gaps = 13/86 (15%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDITR + + AAN L GGGGV+ A+ AAGP L A A R PG++
Sbjct: 15 GDITRQ------AVDAVVTAANESLL-GGGGVDGAVHRAAGPRLAEAGA-RVAPCAPGDA 66
Query: 410 VIVPLPSTSPLCGREGVTHVIHVLGP 435
+ P P V HVIH +GP
Sbjct: 67 IATPAFDLPP-----PVQHVIHTVGP 87
>gi|395858312|ref|XP_003801515.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase [Otolemur
garnettii]
Length = 521
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%), Gaps = 9/78 (11%)
Query: 22 LVIMVGAPGSGKSTFC-EHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+V+ VG PG+GKSTF EH++ + + + +DT+ G+ +C+T+ +ALK+GK
Sbjct: 367 VVVAVGFPGAGKSTFLTEHLVSAG---YVYVNRDTL-----GSWQRCVTTCETALKQGKR 418
Query: 81 VFLDRCNLEREQRTDFVK 98
V +D N + R +++
Sbjct: 419 VVIDNTNPDATSRARYIQ 436
>gi|375150364|ref|YP_005012805.1| bis(5'-nucleosyl)-tetraphosphatase [Niastella koreensis GR20-10]
gi|361064410|gb|AEW03402.1| Bis(5'-nucleosyl)-tetraphosphatase(asymmetrical) [Niastella
koreensis GR20-10]
Length = 850
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 109/265 (41%), Gaps = 35/265 (13%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ----DTINKGKSGTKVQCLTSASSA--L 75
LV+++GA SGKSTF + + + C+ D N ++ T + +A L
Sbjct: 14 LVVLIGASSSGKSTFARKHFKPTEIISSDQCRALVSDNENSQEASTDAFDVARFITAKRL 73
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHE-GNLQ 133
K G +D N++ R D+V+L V A+V+++P KLC+ R+ R + + G
Sbjct: 74 KAGLLTVIDATNVQESARKDWVRLAREYHVLPVAIVINMPEKLCVQRNETRQDRDFGKHV 133
Query: 134 GGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDT------YSG----LGPLD 183
+ + + R L+ +L EGF I + +V A+DT Y+ GP D
Sbjct: 134 IPQQISQLRRSLRHLKL----EGFRNIVELRTPEEVN-AIDTIIRDPLYNNKKQEHGPFD 188
Query: 184 TL--PHGSF----------GQKNPDAKIQLGIMKFLKKVDAPSNTGSTASSTQDPVPPQI 231
+ HG + G KN D Q + L V + G + D V +
Sbjct: 189 LIGDVHGCYDELVELIHKLGYKNTDGIYQHPRDRKLVFVGDLVDRGPKTPAVLDLVMTNV 248
Query: 232 TEEKNSCLEGQEITSLLSDAAGEEV 256
C+ G LL G++V
Sbjct: 249 KAGTAFCVPGNHDAKLLKWLKGKDV 273
>gi|168693569|ref|NP_001108303.1| polynucleotide kinase 3'-phosphatase [Xenopus laevis]
gi|163915835|gb|AAI57746.1| LOC100137702 protein [Xenopus laevis]
Length = 548
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 20/127 (15%)
Query: 22 LVIMVGAPGSGKSTFC-EHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+V+ VG PG+GKSTF EH++ D N+ G+ +C+ + ALKKGK
Sbjct: 440 VVVAVGFPGAGKSTFFKEHLVPKG--------YDYANRDTLGSWQKCVAACEDALKKGKR 491
Query: 81 VFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAK-LCISRSVKRIEHEGNLQGGKAAA 139
+ +D N + E R+ ++ A LPA+ + +++ +H Q + A
Sbjct: 492 IVIDNTNPDLESRSRYIDC--------ARKAGLPARCFLFTATIEEAKHNNREQVCR--A 541
Query: 140 VVNRMLQ 146
V R LQ
Sbjct: 542 VYQRRLQ 548
>gi|134084664|emb|CAK43342.1| unnamed protein product [Aspergillus niger]
Length = 443
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINK--GKSGTKVQCLTSASSALKKGK 79
LVI G+PG+GKS+F + + R+ QD + +S + +C+ A L G+
Sbjct: 279 LVIFCGSPGAGKSSFYWEYLEPLK--YERVNQDLLKTLTNRSPQRPKCIKVAKEHLAAGR 336
Query: 80 SVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEG------NL 132
SV +D N + E R+++V++ V + V LC + R ++ L
Sbjct: 337 SVVVDNTNADPETRSEWVEVAKEFNVPIRCVYFTASPALCRHNNAVRAANQTLNPESRTL 396
Query: 133 QGGKAAAVVNRMLQKKELPKLSEGFSRI 160
G A L++ + P + EGF I
Sbjct: 397 LPGIA---FGDFLRRFKEPLMEEGFQDI 421
>gi|268564296|ref|XP_002647135.1| Hypothetical protein CBG16432 [Caenorhabditis briggsae]
Length = 406
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+++MVG PGSGKST + + + IN+ GT +C+ +A S LK G S+
Sbjct: 251 IIVMVGFPGSGKSTIAKWLAEQNG-------YKIINRDTLGTWQKCVATARSHLKNGDSL 303
Query: 82 FLDRCNLEREQRTDFV 97
+D + ++E R +V
Sbjct: 304 IIDNTSPDKESRQRYV 319
>gi|397486557|ref|XP_003814394.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase [Pan
paniscus]
gi|410226002|gb|JAA10220.1| polynucleotide kinase 3'-phosphatase [Pan troglodytes]
gi|410258732|gb|JAA17333.1| polynucleotide kinase 3'-phosphatase [Pan troglodytes]
gi|410288736|gb|JAA22968.1| polynucleotide kinase 3'-phosphatase [Pan troglodytes]
gi|410333117|gb|JAA35505.1| polynucleotide kinase 3'-phosphatase [Pan troglodytes]
Length = 521
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 7/77 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+T+ +ALK+GK V
Sbjct: 367 VVVAVGFPGAGKSTFLKKHLVSAG--YVHVNRDTL-----GSWQRCVTTCETALKQGKRV 419
Query: 82 FLDRCNLEREQRTDFVK 98
+D N + R +V+
Sbjct: 420 AIDNTNPDAASRARYVQ 436
>gi|345563207|gb|EGX46210.1| hypothetical protein AOL_s00110g34 [Arthrobotrys oligospora ATCC
24927]
Length = 438
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 22/163 (13%)
Query: 15 EKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSA 74
EK++ +V++ G PGSGKST + + RI QD + TK +C+ +A
Sbjct: 270 EKQYPLEVVVLCGRPGSGKSTLTRKYLVPLG--YERINQDILK-----TKDKCIKAAQGF 322
Query: 75 LKKGKSVFLDRCNLEREQRTDFV----KLGGPEVDVHAVVLDLPAKLCISRS-------V 123
LK+G+SV +D N R+ R + K+ G + L LC +
Sbjct: 323 LKEGESVVIDATNSSRDTRAVWKGVADKVKG--ATFRCIYLTTSETLCYHNDGARAYSGM 380
Query: 124 KRIEHEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNE 166
K + E G A K + P ++EGF IT+ E
Sbjct: 381 KSLNPENRTSVGSMA--FRTFKSKFQEPHVNEGFKDITVVDFE 421
>gi|406838885|ref|ZP_11098479.1| Putative phosphatase [Lactobacillus vini DSM 20605]
Length = 187
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 21/99 (21%)
Query: 340 INPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE 399
+ + F + GDIT+L C+ I NAAN L GGGGV+ AI AAGP L +A
Sbjct: 15 VGQSEIFLYQGDITKL------SCDAIVNAANSSLL-GGGGVDGAIHQAAGPQL-LAACR 66
Query: 400 RAKSLYPGNSVIVP---LPSTSPLCGREGVTHVIHVLGP 435
+ G + I P LP+ +VIH +GP
Sbjct: 67 KLHGCQTGEAKITPGFKLPA----------RYVIHTVGP 95
>gi|260818860|ref|XP_002604600.1| hypothetical protein BRAFLDRAFT_126769 [Branchiostoma floridae]
gi|229289928|gb|EEN60611.1| hypothetical protein BRAFLDRAFT_126769 [Branchiostoma floridae]
Length = 633
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 9/141 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+++MVG P SGK+ F + + S + + +D + GT +C+ + S AL GKSV
Sbjct: 477 VIVMVGCPASGKTFFVKQNLVSKG--YVHVNRDVL-----GTWQKCVAACSQALAGGKSV 529
Query: 82 FLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKR-IEHEGNLQGGKAAA 139
+D N + E R +V + V+ LC + R + + G A
Sbjct: 530 VVDNTNPDVESRKRYVDCARQAKAPCRCFVMAASLDLCRHNNRFRDMTYTGAGHVKVADP 589
Query: 140 VVNRMLQKKELPKLSEGFSRI 160
V+ +K P+++EGF +I
Sbjct: 590 VIFSYRKKYVEPQMTEGFDQI 610
>gi|317037386|ref|XP_001399070.2| polynucleotide kinase- 3'-phosphatase [Aspergillus niger CBS
513.88]
Length = 436
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 17/146 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI G+PG+GKS+F + + R+ QD + T+ +C+ A L G+SV
Sbjct: 279 LVIFCGSPGAGKSSFYWEYLEPLK--YERVNQDLLK-----TRPKCIKVAKEHLAAGRSV 331
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEG------NLQG 134
+D N + E R+++V++ V + V LC + R ++ L
Sbjct: 332 VVDNTNADPETRSEWVEVAKEFNVPIRCVYFTASPALCRHNNAVRAANQTLNPESRTLLP 391
Query: 135 GKAAAVVNRMLQKKELPKLSEGFSRI 160
G A L++ + P + EGF I
Sbjct: 392 GIA---FGDFLRRFKEPLMEEGFQDI 414
>gi|346468451|gb|AEO34070.1| hypothetical protein [Amblyomma maculatum]
Length = 592
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 25/150 (16%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V++VG P SGKS F + + S + +A I +D + + +C+ AL++G S
Sbjct: 434 VVVLVGYPASGKSHFAKEYLVS--KQYAHINRDMLKSWQ-----KCVEECEKALERGWSA 486
Query: 82 FLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEH-----EGNLQGG 135
+D N + E R F+ + + V D S++R +H E L+G
Sbjct: 487 VIDNTNPDPESRKRFIDVAKKHGRECRCFVFDC--------SLERAKHNNQFREIKLKGQ 538
Query: 136 KAAAVVNRML----QKKELPKLSEGFSRIT 161
+V + +L K + P LSEGFS I
Sbjct: 539 PHVSVTDMVLYSHRSKFKEPCLSEGFSEIV 568
>gi|302537500|ref|ZP_07289842.1| phosphatase [Streptomyces sp. C]
gi|302446395|gb|EFL18211.1| phosphatase [Streptomyces sp. C]
Length = 866
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV++VGA GSGKSTF + + + C+ D ++ S + L A L
Sbjct: 25 LVVLVGATGSGKSTFARKHFKPTEILSSDYCRGLVADDENDQSASKDAFEVLHYIAGKRL 84
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEG 130
G+ +D ++++E R + V+L E DV A+VLD+P +C R+ R + G
Sbjct: 85 AAGRLTVVDATSVQKESRRELVRL-AREHDVLPIAIVLDMPESVCAERNATRPDRAG 140
>gi|452005294|gb|EMD97750.1| hypothetical protein COCHEDRAFT_1164975 [Cochliobolus
heterostrophus C5]
Length = 450
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 29/153 (18%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+++ G+PG+GKS+F ++ + R+ QD + T+ +C+ SA++ +++G SV
Sbjct: 291 IILFCGSPGAGKSSFYWKHLQPLG--YERVNQDILK-----TREKCVKSATALIEEGTSV 343
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N + R +V L +V + V+ KLC EH +
Sbjct: 344 VIDNTNADPNTRAVWVALAQKLKVPLRCVLFTASPKLC--------EHNDTFRALNVGPE 395
Query: 141 VNR----ML---------QKKELPKLSEGFSRI 160
NR ML + PKL+EGF I
Sbjct: 396 TNRESRTMLPHVAFSGFASRYREPKLAEGFVDI 428
>gi|348559480|ref|XP_003465544.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase-like
[Cavia porcellus]
Length = 523
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C++ + LK+ K V
Sbjct: 369 VVVAVGFPGAGKSTFLQEHLVSAG--YVHVNRDTL-----GSWQRCVSKCEATLKQRKRV 421
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRI-EHEGNLQGGKAAAV 140
+D N + R +++ + V A L +R R E G+ + V
Sbjct: 422 VIDNTNPDAASRARYIQCAR-DAGVPCRCFLFTATLEQARHNNRFRELTGSSHAPVSDVV 480
Query: 141 VNRMLQKKELPKLSEGFSRI 160
+ ++ E P LSEGFS I
Sbjct: 481 MFGYRKQFEAPALSEGFSEI 500
>gi|268318092|ref|YP_003291811.1| Appr-1-p processing protein [Rhodothermus marinus DSM 4252]
gi|262335626|gb|ACY49423.1| Appr-1-p processing domain protein [Rhodothermus marinus DSM 4252]
Length = 181
Score = 46.6 bits (109), Expect = 0.040, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 366 IANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVP---LPSTSPLCG 422
I NAAN +L P GGGV AI AAGP L A A + PG +VI P LP+
Sbjct: 26 IVNAANAQLMP-GGGVAGAIHRAAGPELAEACRPLA-PIRPGQAVITPGFRLPN------ 77
Query: 423 REGVTHVIHVLGP 435
+VIHVLGP
Sbjct: 78 ----RYVIHVLGP 86
>gi|297202992|ref|ZP_06920389.1| phosphatase [Streptomyces sviceus ATCC 29083]
gi|197711985|gb|EDY56019.1| phosphatase [Streptomyces sviceus ATCC 29083]
Length = 847
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV++VGA GSGKSTF + + + C+ D ++G + L A L
Sbjct: 18 LVVLVGASGSGKSTFARRHFKPTEVISSDFCRGLVSDDENDQGATKDAFDVLHYIAGKRL 77
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D +++ + R + L + DV A+VLD+P ++C R+ R + +
Sbjct: 78 AAGRRTVVDATSVQSDSRRQLIDL-AKQYDVLPIAIVLDVPEEVCAERNAARTD-----R 131
Query: 134 GGKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAA 172
V+ R ++ ++ + L EGF ++ + + D++ A
Sbjct: 132 ADMPVRVIKRHIRELRRSVRHLEREGFRKVHVLRGVADIEQA 173
>gi|229173079|ref|ZP_04300630.1| hypothetical protein bcere0006_21860 [Bacillus cereus MM3]
gi|228610412|gb|EEK67683.1| hypothetical protein bcere0006_21860 [Bacillus cereus MM3]
Length = 322
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 91/207 (43%), Gaps = 36/207 (17%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTIN---------KGKSGTKVQ-CLTSA 71
L+ +VG P SGKS++ + +++ R A + D + +GK+G + +
Sbjct: 4 LIYLVGLPASGKSSYAK-MLQKQYRA-AIVATDELRQTLFYSETKQGKTGILYRYAMERV 61
Query: 72 SSALKKGKSVFLDRCNLEREQRTDFV-KLGG-PEVDVHAVVLDLPAKLCISRSVKRIEHE 129
L+ G++V LD N+ER R + +L P ++ V+D P + C R+ +R
Sbjct: 62 REHLEDGRNVILDATNIERGFRVKALHRLHDIPNLEKRCYVVDTPYQECQKRNQER---- 117
Query: 130 GNLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQ-------NENDVQAALDTYSGLGP- 181
+ ++ +M +K E P + EG+ +I + ++ + Q L Y
Sbjct: 118 ---KRTVEERILEKMYKKVEFPLMEEGWDQIEILHTPDSYNISKQEFQELLTEYPSYEEF 174
Query: 182 ---LDTLPHGS----FGQKNPDAKIQL 201
L+++P S + Q NP + L
Sbjct: 175 YQRLNSIPFFSDMFQYDQGNPYHSLSL 201
>gi|345304382|ref|YP_004826284.1| Appr-1-p processing domain-containing protein [Rhodothermus marinus
SG0.5JP17-172]
gi|345113615|gb|AEN74447.1| Appr-1-p processing domain protein [Rhodothermus marinus
SG0.5JP17-172]
Length = 181
Score = 46.6 bits (109), Expect = 0.042, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 366 IANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVP---LPSTSPLCG 422
I NAAN +L P GGGV AI AAGP L A A + PG +VI P LP+
Sbjct: 26 IVNAANAQLMP-GGGVAGAIHRAAGPELAEACRPLA-PIRPGQAVITPGFRLPN------ 77
Query: 423 REGVTHVIHVLGP 435
+VIHVLGP
Sbjct: 78 ----RYVIHVLGP 86
>gi|297627003|ref|YP_003688766.1| hypothetical protein PFREUD_18540 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296922768|emb|CBL57346.1| Hypothetical protein PFREUD_18540 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 169
Score = 46.6 bits (109), Expect = 0.042, Method: Composition-based stats.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE-RAKSLYPGN 408
GDITRL + I NAAN L GGGGV+ AI A GPA+ A + RA SL G
Sbjct: 8 GDITRLRV------DAIVNAANSSLL-GGGGVDGAIHRAGGPAILAACRQLRATSLPDGL 60
Query: 409 SVIVPLPSTSPLCGREGVTHVIHVLGP 435
+ +T+ G+ T VIH +GP
Sbjct: 61 PAGQAVATTA---GKLPATWVIHTVGP 84
>gi|46137935|ref|XP_390658.1| hypothetical protein FG10482.1 [Gibberella zeae PH-1]
Length = 458
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q +++ G PG+GKST ++ +ARI QD + T+ +C+ +A L++G
Sbjct: 299 QDIILFCGPPGAGKSTLYWKSLKPLG--YARINQDLLK-----TRDKCVQAAKEHLQEGT 351
Query: 80 SVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKR-----IEHEGNLQ 133
SV +D N + RT +V+L + + V P ++C + R + E L
Sbjct: 352 SVAIDNTNADPATRTVWVELAKEFGISIRCVWFKTPLQVCEHNNAVRALNESLNPESRLV 411
Query: 134 GGKAA--AVVNRMLQKKELPKLSEGFSRI 160
K A + NR + P + EGF I
Sbjct: 412 LPKMAFTSFANRF----KPPSVKEGFQDI 436
>gi|348523720|ref|XP_003449371.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase-like
[Oreochromis niloticus]
Length = 605
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 27/150 (18%)
Query: 22 LVIMVGAPGSGKSTFCE-HVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+++ VG P SGKS+F HV+ + + + +DT+ G+ C+++ ALK+G+S
Sbjct: 448 VIVAVGFPASGKSSFFHTHVI---PKGYVYVNRDTL-----GSWQNCVSACERALKEGRS 499
Query: 81 VFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAK-LCISRSVKRIEHEGNLQ----GG 135
V +D N + E R +V + A +P + S ++++ +H +
Sbjct: 500 VAIDNTNPDPESRKRYVDV--------AKAAGVPCRCFHFSATLEQAKHNNRFREMAPSE 551
Query: 136 KAAAVVNRML---QKKEL--PKLSEGFSRI 160
A VN M+ KK P LSEGFS I
Sbjct: 552 SKHAKVNDMVFHSYKKHFQAPALSEGFSEI 581
>gi|345452623|gb|AEN94517.1| non-structural polyprotein p200 [Rubella virus]
Length = 2116
Score = 46.6 bits (109), Expect = 0.043, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 363 CNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCG 422
C V+ NAAN L G GV AIF+ A PAL A R G +V P
Sbjct: 833 CKVVVNAANEGLL-AGSGVCGAIFANATPAL-AADCRRLAPCPTGEAVATPGHGC----- 885
Query: 423 REGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSL 463
G TH+IH + P PR P L+ +G +L +AY S+
Sbjct: 886 --GYTHIIHAVAPR-RPRDPAALE----EGEALLERAYRSI 919
>gi|402906376|ref|XP_003915978.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase [Papio
anubis]
Length = 521
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 23/147 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+T+ +ALK+GK V
Sbjct: 367 VVVAVGFPGAGKSTFLKKHLVSAG--YVHVNRDTL-----GSWQRCVTACETALKQGKRV 419
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAK-LCISRSVKRIEHEGNLQGGKAAA- 139
+D N + R +++ A P + + ++++ H + ++
Sbjct: 420 AIDNTNPDSASRARYLQC--------ARAAGFPCRCFLFTATLEQARHNNRFREMTDSSH 471
Query: 140 ------VVNRMLQKKELPKLSEGFSRI 160
V+ ++ E P L+EGFS I
Sbjct: 472 VPVSDMVMYGYRKQFEAPTLAEGFSAI 498
>gi|372267680|ref|ZP_09503728.1| Appr-1-p processing protein [Alteromonas sp. S89]
Length = 170
Score = 46.6 bits (109), Expect = 0.044, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 31/45 (68%), Gaps = 7/45 (15%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL 393
+GDITRL+ +VI NAAN RL GGGGV+ AI AAGPAL
Sbjct: 6 LGDITRLHV------DVIVNAANQRLL-GGGGVDGAIHRAAGPAL 43
>gi|422003467|ref|ZP_16350697.1| protein serine-threonine phosphatase [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417257951|gb|EKT87346.1| protein serine-threonine phosphatase [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 856
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 75/190 (39%), Gaps = 29/190 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMR-----SSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV+++G GSGKS+F + + SS A + D N+ + L A L
Sbjct: 10 LVVLIGTSGSGKSSFAKKHFKKSEILSSDECRALVSDDENNQAATNDAFDVLYYIARKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHEGN 131
+ G +D N+ERE R ++L D H A++LD P K+C R+ G
Sbjct: 70 QNGLLTVIDATNVERESRKGLIELSR---DYHCLPVAIILDTPNKVCEERN-----RNGK 121
Query: 132 LQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAAL---------DTYSGLGPL 182
G R L+ EGF I + ++ ++ + D GP
Sbjct: 122 NFGSHVIHRQKRQLKSSIKSLKGEGFRHIYILKSVEEIDSVTAIIREKLYNDKKDISGPF 181
Query: 183 DTL--PHGSF 190
D + HG F
Sbjct: 182 DIIGDIHGCF 191
>gi|327294497|ref|XP_003231944.1| polynucleotide kinase [Trichophyton rubrum CBS 118892]
gi|326465889|gb|EGD91342.1| polynucleotide kinase [Trichophyton rubrum CBS 118892]
Length = 504
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 25/153 (16%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LV++ G+PGSGKSTF ++ + R+ QD + T+ +CL A+ L GKSV
Sbjct: 341 LVLLCGSPGSGKSTFYWKHLQPLG--YERVNQDILK-----TRQKCLKVANENLLAGKSV 393
Query: 82 FLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDL------------PAKLCISRSVK-RIE 127
+D N + R +++ L + + + L L PA+ C+ E
Sbjct: 394 AVDNTNANKSTRAEWISLAKSHSLPIRCIYLPLRSHHLRSAVPVTPAEPCMCEYESLNPE 453
Query: 128 HEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRI 160
L G + R E P +SEGF +
Sbjct: 454 SRTKLPGMAFSEYARRF----EEPDVSEGFKDV 482
>gi|290956812|ref|YP_003487994.1| calcineurin-like phosphoesterase [Streptomyces scabiei 87.22]
gi|260646338|emb|CBG69433.1| putative calcineurin-like phosphoesterase [Streptomyces scabiei
87.22]
Length = 850
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 23/165 (13%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTIN---KGKSGTK--VQCLTS-ASSAL 75
LV++VGA GSGKSTF + + + C+ ++ +S TK L A L
Sbjct: 21 LVVLVGASGSGKSTFARRHFKPTEIISSDFCRGLVSDDENDQSATKDAFDVLHYIAGKRL 80
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
G+ +D ++++E R ++L +V A+VLD+P ++C R+ R +
Sbjct: 81 AAGRRTVVDATSVQQESRKQLIELARTHDVLPIAIVLDVPEEVCAERNAARTDR------ 134
Query: 135 GKAAAVVNRMLQK--KELPKL-----SEGFSRITLCQNENDVQAA 172
A + R++Q+ +EL + EGF ++ + + DV A
Sbjct: 135 ---ADMPRRVIQRHTRELRRSLRHLEREGFRKVHVLRGVEDVDNA 176
>gi|95007332|emb|CAJ20552.1| hypothetical protein TgIb.0770 [Toxoplasma gondii RH]
Length = 637
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI++GAPGSGKST E V + + I QD + T+ +C+ + AL + ++V
Sbjct: 515 LVILIGAPGSGKSTLTETVFKD----YTCIRQDDLK-----TQAKCVKACEKALTEKRNV 565
Query: 82 FLDRCNLEREQRTDFVKLG 100
+D N + R ++KLG
Sbjct: 566 VIDMQNATCKTREPYIKLG 584
>gi|298706924|emb|CBJ29751.1| polynucleotide kinase [Ectocarpus siliculosus]
Length = 656
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 13/144 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V++VG PG GKST C+ + ARI QD + K +C A L+ G+SV
Sbjct: 490 VVVLVGPPGGGKSTLCKDRLPDH----ARINQDELKSLK-----RCEREAGERLRGGRSV 540
Query: 82 FLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAA-- 138
+D N R R ++ L + L P + C + R + +G +
Sbjct: 541 VIDATNAGRGTRAGWLDLARQHGATARCIYLTTPKEACFHLNAFRGCDPWSPEGERRKVP 600
Query: 139 -AVVNRMLQKKELPKLSEGFSRIT 161
V++ + + P +EGFS +
Sbjct: 601 DVVIHTWFKYVDPPHKNEGFSEVV 624
>gi|71010195|ref|XP_758358.1| hypothetical protein UM02211.1 [Ustilago maydis 521]
gi|46098100|gb|EAK83333.1| hypothetical protein UM02211.1 [Ustilago maydis 521]
Length = 492
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 15/143 (10%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VGAP SGK+ V + + + QDT+ T+ +CL ++ +S
Sbjct: 332 IVLFVGAPASGKTFLFNRVFAPAH--YVHVNQDTLR-----TRDKCLGVVRENIQANRSC 384
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGK---- 136
+D N +R R ++ L V + + D+P +C+ + R H G G +
Sbjct: 385 VVDNTNRDRATRKHYIDLARSLGVRIRCLYFDVPKHVCVHNNHFR-AHHGPTSGQELVRS 443
Query: 137 --AAAVVNRMLQKKELPKLSEGF 157
A + + ++ P EGF
Sbjct: 444 LLPATAIESWFKDRQPPLRDEGF 466
>gi|392589866|gb|EIW79196.1| hypothetical protein CONPUDRAFT_59583, partial [Coniophora puteana
RWD-64-598 SS2]
Length = 307
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 57 NKGKSGTKVQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLGG--PEVDVHAVVLDLP 114
N+ + G++++ + AL +G SV +DR N++ QR ++ + P V +V D P
Sbjct: 18 NQDELGSRLRVEVAVRQALAEGLSVCVDRTNVDPTQRAHWINIAREFPGTRVGVIVFDTP 77
Query: 115 AKLCISRSVKRIEHEGNLQGGKAAAVVNRMLQKKELPKLSEG 156
+C SR R H + ++++R + P+ EG
Sbjct: 78 YNVCASRLHTRTSHPTITSPEQGLSILSRFARDLVWPRAYEG 119
>gi|399031649|ref|ZP_10731552.1| putative kinase [Flavobacterium sp. CF136]
gi|398070067|gb|EJL61386.1| putative kinase [Flavobacterium sp. CF136]
Length = 299
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 19/118 (16%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGK--------SGTKV--QCLTSA 71
L I++G P SGKST+ E +R+ ++ RI +D I + S T + LT
Sbjct: 7 LTILIGCPASGKSTYAEWKVRTESKT-MRISRDEIRFSQFQETMDPASETMISKMILTQV 65
Query: 72 SSALKKGKSVFLDRCNLE----REQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKR 125
+ L G +V LD CN++ ++ +DF ++ + + DLP + + R+ KR
Sbjct: 66 KTLLSNGWNVILDNCNVKLDYIKQPVSDFSEMAN----IDFKLFDLPLEELLVRNEKR 119
>gi|419333657|ref|ZP_13875207.1| regulator of RNase III activity [Escherichia coli DEC12D]
gi|378188055|gb|EHX48664.1| regulator of RNase III activity [Escherichia coli DEC12D]
Length = 177
Score = 46.2 bits (108), Expect = 0.051, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 43/88 (48%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + YP
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDYPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGALP------AKAVVHTVGP 84
>gi|383775269|ref|YP_005459835.1| putative serine/threonine protein phosphatase [Actinoplanes
missouriensis 431]
gi|381368501|dbj|BAL85319.1| putative serine/threonine protein phosphatase [Actinoplanes
missouriensis 431]
Length = 832
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSS---ARPWAR--ICQDTINKGKSGTKVQCL-TSASSAL 75
LV +VG GSGKSTF +S+ + + R + D ++ S + L A L
Sbjct: 10 LVALVGISGSGKSTFARKHWKSTQVLSSDFFRGLVADDENDQSASADAFEVLHYVAGKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D NL+ R VK+ E DV A+VLD+P L R+ R + Q
Sbjct: 70 AAGRLTVVDATNLQSHARAGLVKV-AREHDVLPVAIVLDVPESLAWERTQARADRTFGRQ 128
Query: 134 GGKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDV 169
V+ RM + ++ L +LS EGF +I + + +++
Sbjct: 129 ------VLTRMHRDLRRSLNQLSREGFRKIHVLRGVDEI 161
>gi|358057896|dbj|GAA96141.1| hypothetical protein E5Q_02802 [Mixia osmundae IAM 14324]
Length = 440
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 9/79 (11%)
Query: 22 LVIMVGAPGSGKST-FCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+V+ VG PGSGK+ + +H +++ + + QDT+ T++ C++ S+L++GKS
Sbjct: 271 VVVAVGYPGSGKTQLYRDHF---ASKGYVHVNQDTLK-----TRIACISLVESSLREGKS 322
Query: 81 VFLDRCNLEREQRTDFVKL 99
F+D N E R ++ L
Sbjct: 323 CFVDNTNRNIETRAHYIDL 341
>gi|380018592|ref|XP_003693211.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase-like
[Apis florea]
Length = 545
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 25/150 (16%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q +++MVG PGSGKS F ++ + + + +DT+ G+ +C+T+ L +
Sbjct: 389 QEIILMVGCPGSGKSYFVKNYLDH----YGYVNRDTL-----GSWKKCITTMEKHLDEKS 439
Query: 80 SVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAK-LCISRSVKRIEHEGNLQ----- 133
SV +D N + R ++++ A ++P + ++ S+ +H +
Sbjct: 440 SVVIDNTNPDCVSRQRYIEI--------AKKYNIPVRCFVMTTSIDHAKHNNKFRELTDP 491
Query: 134 --GGKAAAVVNRMLQKKELPKLSEGFSRIT 161
++N ++ + P L EGF I
Sbjct: 492 SHAKVNDVIINSYVKNYQQPSLEEGFKEIV 521
>gi|440898022|gb|ELR49604.1| Bifunctional polynucleotide phosphatase/kinase, partial [Bos
grunniens mutus]
Length = 471
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%), Gaps = 9/78 (11%)
Query: 22 LVIMVGAPGSGKSTFC-EHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+V+ VG PG+GKSTF EH++ + + + +DT+ G+ +C+T+ +ALK+ K
Sbjct: 368 VVVAVGFPGAGKSTFLREHLVSAG---YVHVNRDTL-----GSWQRCVTACEAALKQRKP 419
Query: 81 VFLDRCNLEREQRTDFVK 98
V +D N + + R ++K
Sbjct: 420 VVIDNTNPDVQSRARYIK 437
>gi|400593646|gb|EJP61572.1| polynucleotide kinase 3 phosphatase [Beauveria bassiana ARSEF 2860]
Length = 454
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 13/145 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ G PG+GKSTF + + R+ QDT+ T+ +C+ +A L +G SV
Sbjct: 297 IVLFCGWPGAGKSTFYWKHLEPLG--YERVNQDTLK-----TREKCVQAAKEFLDEGSSV 349
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLC----ISRSVKRIEHEGNLQGGK 136
+D N + R ++ L +V + V PA +C RS+ + + N +
Sbjct: 350 AVDNTNADPATRKIWIDLARAFKVPIRCVSFTTPAAVCRHNDAVRSLNKPLNPENREVLP 409
Query: 137 AAAVVNRMLQKKELPKLSEGFSRIT 161
A + + P+ SEGF IT
Sbjct: 410 DVAFTG-FQSRYKAPQESEGFQDIT 433
>gi|429109819|ref|ZP_19171589.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Cronobacter malonaticus 507]
gi|426310976|emb|CCJ97702.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Cronobacter malonaticus 507]
Length = 180
Score = 46.2 bits (108), Expect = 0.058, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDITR+ +VI NAAN L GGGGV+ AI AAGPAL A ++ P
Sbjct: 10 GDITRIDV------DVIVNAANPSLM-GGGGVDGAIHRAAGPALLAACKVVRQQQGECQP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI G V+H +GP
Sbjct: 63 GHAVITE-------AGNLAAKAVVHTVGP 84
>gi|121997700|ref|YP_001002487.1| appr-1-p processing domain-containing protein [Halorhodospira
halophila SL1]
gi|121589105|gb|ABM61685.1| Appr-1-p processing domain protein [Halorhodospira halophila SL1]
Length = 181
Score = 46.2 bits (108), Expect = 0.058, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 39/76 (51%), Gaps = 15/76 (19%)
Query: 363 CNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVP---LPSTSP 419
C+ + NAAN +L P GGGV A+ AAGP L A A + PG +VI LP+
Sbjct: 23 CDAVVNAANAQLMP-GGGVAGALHRAAGPELAEACRPLA-PIQPGQAVITAGFGLPN--- 77
Query: 420 LCGREGVTHVIHVLGP 435
HVIH LGP
Sbjct: 78 -------RHVIHCLGP 86
>gi|239908471|ref|YP_002955213.1| hypothetical protein DMR_38360 [Desulfovibrio magneticus RS-1]
gi|239798338|dbj|BAH77327.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 189
Score = 46.2 bits (108), Expect = 0.060, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 40/78 (51%), Gaps = 17/78 (21%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE---RAKSLYPGNSVIVP---LPST 417
+ I NAAN L GGGGV+ AI AAGP L A + R SL G +VI P LP+
Sbjct: 27 DAIVNAANSALA-GGGGVDGAIHRAAGPKLPAACRDIIARIGSLPAGGAVITPGFELPA- 84
Query: 418 SPLCGREGVTHVIHVLGP 435
H+IH +GP
Sbjct: 85 ---------RHIIHTVGP 93
>gi|429108306|ref|ZP_19170175.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Cronobacter malonaticus 681]
gi|426295029|emb|CCJ96288.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Cronobacter malonaticus 681]
Length = 180
Score = 46.2 bits (108), Expect = 0.060, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDITR+ +VI NAAN L GGGGV+ AI AAGPAL A ++ P
Sbjct: 10 GDITRIDV------DVIVNAANPSLM-GGGGVDGAIHRAAGPALLAACKVVRQQQGECQP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI G V+H +GP
Sbjct: 63 GHAVITE-------AGNLAAKAVVHTVGP 84
>gi|315504163|ref|YP_004083050.1| appr-1-p processing domain-containing protein [Micromonospora sp.
L5]
gi|315410782|gb|ADU08899.1| Appr-1-p processing domain protein [Micromonospora sp. L5]
Length = 168
Score = 46.2 bits (108), Expect = 0.060, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 43/87 (49%), Gaps = 13/87 (14%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGN 408
+GDITR + + AAN L GGGGV+ AI AAGP L A A A PG+
Sbjct: 6 LGDITREDV------DAVVTAANESLL-GGGGVDGAIHRAAGPRLAQAGAALAPC-DPGD 57
Query: 409 SVIVPLPSTSPLCGREGVTHVIHVLGP 435
+V P P V HVIH +GP
Sbjct: 58 AVATPAFDLDP-----PVRHVIHTVGP 79
>gi|156101441|ref|XP_001616414.1| bifunctional polynucleotide phosphatase/kinase [Plasmodium vivax
Sal-1]
gi|148805288|gb|EDL46687.1| bifunctional polynucleotide phosphatase/kinase, putative
[Plasmodium vivax]
Length = 481
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q LV++VG PG GK++ C++ A IN + TK + + + A+ GK
Sbjct: 319 QHLVLLVGPPGCGKTSLCKNHFADFAH---------INLEELKTKNKRIETIRQAITSGK 369
Query: 80 SVFLDRCNLEREQRTDFV---KLGGPEVDVHAVVLDLPAKLCIS-RSVKRIEHEGNLQGG 135
+V +D N+ + R ++ K ++V A+ + +L + K I + N
Sbjct: 370 NVVMDNANMYVKNRLIYITEAKKINANLNVSAIFFNYSKELVFHLNNFKLIADDENRMHE 429
Query: 136 KAAAVVNRMLQKKELPKLSEGFSRITLCQNENDV 169
++ + E+P SE R+ +E+ V
Sbjct: 430 VPTIAIHSFYKYVEVPSESENLDRVVTLHDEHFV 463
>gi|302692418|ref|XP_003035888.1| hypothetical protein SCHCODRAFT_81277 [Schizophyllum commune H4-8]
gi|300109584|gb|EFJ00986.1| hypothetical protein SCHCODRAFT_81277 [Schizophyllum commune H4-8]
Length = 444
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
+Q +VI G P GKSTF + + I QDT+ GT+ +C+ + ALK+G
Sbjct: 276 RQEIVIFHGYPCLGKSTFYHRHFEPAG--YVHINQDTL-----GTRPKCIKAVQEALKEG 328
Query: 79 KSVFLDRCNLEREQRTDFVKLG 100
KS +D N R +++L
Sbjct: 329 KSCVVDNTNRNAATRAHYIELA 350
>gi|383638824|ref|ZP_09951230.1| phosphatase [Streptomyces chartreusis NRRL 12338]
Length = 858
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTIN---KGKSGTK--VQCLTS-ASSAL 75
LV++VGA GSGKSTF + + + C+ ++ +S TK L A L
Sbjct: 17 LVVLVGASGSGKSTFARRHFKPTEIISSDFCRGLVSDDENDQSATKDAFDVLHYIAGKRL 76
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D +++ E R V+L DV A+VLD+P +C R+ R +
Sbjct: 77 AAGRRTVVDATSVQPEARRQLVEL-ARRYDVLPIAIVLDVPEDVCAERNAARTDR----- 130
Query: 134 GGKAAAVVNRMLQK--KELPKL-----SEGFSRITLCQNENDVQAA 172
A + R++Q+ +EL + EGF ++ + + DV+ A
Sbjct: 131 ----ADMPRRVIQRHTRELRRSLRHLEREGFRKVHVLRGVADVETA 172
>gi|329923687|ref|ZP_08279098.1| hypothetical protein HMPREF9412_5258 [Paenibacillus sp. HGF5]
gi|328941120|gb|EGG37421.1| hypothetical protein HMPREF9412_5258 [Paenibacillus sp. HGF5]
Length = 321
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 24/161 (14%)
Query: 24 IMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKV----------QCLTSASS 73
++VG PGSGKS + + + +S + D I + G++ +
Sbjct: 6 MLVGIPGSGKSYYAKQLCKSERAVL--VATDAIRERLFGSESKQKNTYLVFDEAFAEIEQ 63
Query: 74 ALKKGKSVFLDRCNLEREQRTDFVK-LGGPEVDVHAVVLDLPAKL-CISRSVKRIEHEGN 131
ALK ++V D N+ RE+R F+K G V+ H A L + R +R++ +
Sbjct: 64 ALKSDRNVVFDATNVSRERRQKFLKRFGDRRVECHICTTPYEAALDRVKRRKRRLDEK-- 121
Query: 132 LQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAA 172
++ + + E P + EGF + L + Q A
Sbjct: 122 --------IMTKYAKNLEFPVMGEGFVDLHLVHEPGETQLA 154
>gi|443475201|ref|ZP_21065158.1| 6-phosphofructo-2-kinase [Pseudanabaena biceps PCC 7429]
gi|443019988|gb|ELS34002.1| 6-phosphofructo-2-kinase [Pseudanabaena biceps PCC 7429]
Length = 166
Score = 45.8 bits (107), Expect = 0.062, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 21/155 (13%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSAR----PWARICQDTINKGKSGTKV----------QC 67
++I++G P SGKS+ E +MR+S + I D I G+ Q
Sbjct: 4 VIILIGVPASGKSSLAEKMMRASNQNNQIQTKLISPDRIRASLYGSAATQGDWAEIWEQI 63
Query: 68 LTSASSALKKGKSVFLDRCNLEREQRTDFVKLGGPE--VDVHAVVLDLPAKLCISRSVKR 125
++A K +SV D N +RE R + + L + + L++P +C+SR+
Sbjct: 64 QQEFTNAAKSQQSVIYDATNYKREYRKNIIYLAKENGFKPITGIWLNVPLWICLSRN--- 120
Query: 126 IEHEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRI 160
E + + R L P LSEGF RI
Sbjct: 121 -ETRDRVVPDDIVVDMYRTLSYTP-PTLSEGFDRI 153
>gi|428221268|ref|YP_007105438.1| putative kinase [Synechococcus sp. PCC 7502]
gi|427994608|gb|AFY73303.1| putative kinase [Synechococcus sp. PCC 7502]
Length = 162
Score = 45.8 bits (107), Expect = 0.064, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 17/153 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTK----------VQCLTSA 71
++I++G PGSGKS+F ++++SSA P + D I G+ Q
Sbjct: 4 VIILIGIPGSGKSSFVSNLVQSSATPITVVSPDLIRCELYGSSNIQGNWTEIYAQIKLQF 63
Query: 72 SSALKKGKSVFLDRCNLEREQRTDFVKLGGP--EVDVHAVVLDLPAKLCISRSVKRIEHE 129
+ ++ KSV D N R + + L + + L++P +C+ R+ EH
Sbjct: 64 QESYQEQKSVIYDATNYRSHYRQEIITLSKNIGFTSITGIWLNVPLWICLERN----EHR 119
Query: 130 GNLQGGKAAAVVNRMLQKKELPKLSEGFSRITL 162
N + + L + P L EGF + +
Sbjct: 120 TNPVPENIIMEMYKTLMHRS-PSLREGFDYLMI 151
>gi|92112452|ref|YP_572380.1| Appr-1-p processing [Chromohalobacter salexigens DSM 3043]
gi|91795542|gb|ABE57681.1| Appr-1-p processing [Chromohalobacter salexigens DSM 3043]
Length = 183
Score = 45.8 bits (107), Expect = 0.065, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDITRL + I NAAN L GGGGV+ AI+ AAGPAL+ A ++ +P
Sbjct: 15 GDITRLDV------DAIVNAANHSLM-GGGGVDGAIYRAAGPALKRACRALRETHWPDG- 66
Query: 410 VIVPLPSTSPLCGRE-GVTHVIHVLGP 435
+P + G E +VIH +GP
Sbjct: 67 --LPDGEVALTEGFELPARYVIHTVGP 91
>gi|312200132|ref|YP_004020193.1| Appr-1-p processing protein [Frankia sp. EuI1c]
gi|311231468|gb|ADP84323.1| Appr-1-p processing domain protein [Frankia sp. EuI1c]
Length = 178
Score = 45.8 bits (107), Expect = 0.065, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGR 423
+ + NAAN L GGGGV+ AI A GPA+ A + YPG LP+ +
Sbjct: 18 DAVVNAANSSLL-GGGGVDGAIHRAGGPAILEACRRLRDTAYPGG-----LPTGGAVATA 71
Query: 424 EGV---THVIHVLGP 435
G+ HVIHV+GP
Sbjct: 72 AGLLPARHVIHVVGP 86
>gi|392396451|ref|YP_006433052.1| polynucleotide 2',3'-cyclic phosphate phosphodiesterase
[Flexibacter litoralis DSM 6794]
gi|390527529|gb|AFM03259.1| polynucleotide 3'-phosphatase [Flexibacter litoralis DSM 6794]
Length = 873
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQ------CLTSASSAL 75
LV++VGA SGKSTF ++ S+ + C+ I+ ++ V A L
Sbjct: 15 LVLLVGASSSGKSTFAKNHFLSTEVISSDNCRALISDDENNLSVTKEAFEVVHFLAKKRL 74
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH-AVVLDLPAKLCISRSVKRIEHEGNLQG 134
+ GK V +D N+ +E R V+L + A+VLD P K+ + R HE
Sbjct: 75 ELGKLVVIDALNIRKEDRQKLVQLAKDNYALAVAIVLDNPIKILLER------HENRTDR 128
Query: 135 GKAAAVVNRMLQ--KKELPKLS-EGFSRI 160
V+++ K+ L L EGF+ I
Sbjct: 129 NFPKGVIDKQYNDYKQSLKSLKFEGFNYI 157
>gi|350407887|ref|XP_003488229.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase-like
[Bombus impatiens]
Length = 567
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 25/150 (16%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q +++MVG PGSGKS H +R+ + + + +DT+ G+ +C+T + +
Sbjct: 411 QEIILMVGCPGSGKS----HFVRNYLKHYGYVNRDTL-----GSWQKCITIMEKHINEKD 461
Query: 80 SVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAK-LCISRSVKRIEHEGNLQGGKAA 138
SV +D N + R ++++ A ++P + + S+ +H +
Sbjct: 462 SVVIDNTNPDCVSRQRYIEV--------AKKYNIPVRCFVMLTSIDHAKHNNKFRELTDP 513
Query: 139 A-------VVNRMLQKKELPKLSEGFSRIT 161
+ V+N ++ + P L EGF+ I
Sbjct: 514 SHVKVNDLVINSYVKSYQQPSLEEGFTEIV 543
>gi|161503766|ref|YP_001570878.1| hypothetical protein SARI_01851 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160865113|gb|ABX21736.1| hypothetical protein SARI_01851 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 179
Score = 45.8 bits (107), Expect = 0.066, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 46/89 (51%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE--RAKSLYP- 406
GDIT+L + I NAAN L GGGGV+ AI AAGPAL A + R + P
Sbjct: 10 GDITQL------SVDAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKKIRRQQGECPT 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI P G+ VIH +GP
Sbjct: 63 GHAVITP-------AGKLSAKAVIHTVGP 84
>gi|88813248|ref|ZP_01128488.1| Predicted phosphatase [Nitrococcus mobilis Nb-231]
gi|88789570|gb|EAR20697.1| Predicted phosphatase [Nitrococcus mobilis Nb-231]
Length = 179
Score = 45.8 bits (107), Expect = 0.067, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 44/90 (48%), Gaps = 20/90 (22%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGN 408
VGDIT + + NAAN L PGGG V AI +AAGP L A + PG+
Sbjct: 14 VGDITAQAD-----VDAVVNAANAELLPGGG-VAGAIHAAAGPEL-AAECRPLAPIRPGD 66
Query: 409 SVIVP---LPSTSPLCGREGVTHVIHVLGP 435
+VI LP+ TH+IH LGP
Sbjct: 67 AVITSGQRLPN----------THIIHCLGP 86
>gi|410910618|ref|XP_003968787.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase-like
[Takifugu rubripes]
Length = 593
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 27/150 (18%)
Query: 22 LVIMVGAPGSGKSTFCE-HVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+++ VG P SGKSTF H++ + + + +DT+ G+ C+++ ALK G+S
Sbjct: 436 VIVAVGFPASGKSTFFHTHII---PKGYVYVNRDTL-----GSWQSCVSACQRALKDGRS 487
Query: 81 VFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAK-LCISRSVKRIEHEGNLQ-----G 134
V +D N + E R +V + A +P + S S+++ +H +
Sbjct: 488 VAVDNTNPDPESRRRYVDV--------AKAAGVPCRCFQFSASLEQAKHNNRFREMVPSD 539
Query: 135 GKAAAVVNRMLQ--KKEL--PKLSEGFSRI 160
K A V + + KK P LSEGFS I
Sbjct: 540 AKHAKVNDIIFHSYKKHFVAPALSEGFSEI 569
>gi|170077164|ref|YP_001733802.1| putative kinase [Synechococcus sp. PCC 7002]
gi|169884833|gb|ACA98546.1| putative kinase [Synechococcus sp. PCC 7002]
Length = 174
Score = 45.8 bits (107), Expect = 0.069, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 21/148 (14%)
Query: 25 MVGAPGSGKSTFCEHVMRSSARPWARICQDTI------NKGKSG----TKVQCLTSASSA 74
++GAPGSGKSTF + +R + I D I + G G + L A
Sbjct: 12 LIGAPGSGKSTFAQW-LRQTMPQACLISTDAIRVQLYGDPGIQGDGPTIEAIVLWRLHQA 70
Query: 75 LKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
+ +GK V D N + R DF+K P +D A L P +C++R+ +R
Sbjct: 71 IAQGKPVIYDATNCHQPWRLDFLK-KCPPLDWLAWYLACPLGICLARNQRRSRQ------ 123
Query: 135 GKAAAVVNRMLQKKEL--PKLSEGFSRI 160
++ +M++ E P+ EGF I
Sbjct: 124 -VPPEIIEKMIRDLEAAPPQAQEGFLEI 150
>gi|373251992|ref|ZP_09540110.1| RNase III inhibitor [Nesterenkonia sp. F]
Length = 179
Score = 45.8 bits (107), Expect = 0.070, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGR 423
+ I +AAN L GGGGV+ AI +AAGP L + +P +T P GR
Sbjct: 16 DAIVDAANSSLT-GGGGVDGAIHAAAGPELLAHCHVLREEAWPDGLPPGEAAATPP--GR 72
Query: 424 EGVTHVIHVLGPN 436
THVIH +GPN
Sbjct: 73 LPATHVIHTVGPN 85
>gi|254424275|ref|ZP_05037993.1| Ser/Thr protein phosphatase family protein [Synechococcus sp. PCC
7335]
gi|196191764|gb|EDX86728.1| Ser/Thr protein phosphatase family protein [Synechococcus sp. PCC
7335]
Length = 872
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 22 LVIMVGAPGSGKSTFC-EHVMR----SSARPWARICQDTINKGKSGTKVQCLTSA-SSAL 75
LVI++GA G+GKSTF +H + SS + D ++ + L + L
Sbjct: 10 LVILIGASGAGKSTFARKHFAKTEILSSDHFRGVVSDDETDQSATKDAFDVLHYILAKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKR 125
K GK +D N++R R +KL A+V +LPA +C R+ KR
Sbjct: 70 KSGKLTVIDATNVQRGARRSLLKLAKEYHFFSEAIVFNLPATICHKRNQKR 120
>gi|260588417|ref|ZP_05854330.1| conserved hypothetical protein [Blautia hansenii DSM 20583]
gi|260541291|gb|EEX21860.1| conserved hypothetical protein [Blautia hansenii DSM 20583]
Length = 296
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 16/149 (10%)
Query: 24 IMVGAPGSGKSTFCE-------HVMRSSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
+M+G PGSGKS E V+ +S R + +D + G +G L L
Sbjct: 1 MMIGIPGSGKSQEAEIIAKEHNAVIHASDRLREELFRDVNHMGDNGFLFNELHKRIQRDL 60
Query: 76 KKGKSVFLDRCNLEREQRTDFVK-LGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
K GK+V D N+ ++R F+K L + A+++ P + C+ + +R +
Sbjct: 61 KAGKNVIYDATNINSKKRISFLKSLKDIPCEKIAILIMTPYQQCLKNNAER-------ER 113
Query: 135 GKAAAVVNRMLQKKELPKLSEGFSRITLC 163
+V+ +M ++P EGF I +
Sbjct: 114 SIPESVIEKMYTNFQVPYYYEGFDIIQVV 142
>gi|407035173|gb|EKE37575.1| DNA 3'-phosphatase domain containing protein [Entamoeba nuttalli
P19]
Length = 388
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 22/145 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+++ VG+P SGK++F E ++ W IN G K +C+ A L + +S+
Sbjct: 235 MILFVGSPASGKTSFYEKYLKPKGYGW-------INMDTLGNKTKCMREAKK-LIENESL 286
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGN----LQGGK- 136
+D N E R +F++L D+P + K++ + N L K
Sbjct: 287 VIDNSNPTIEGRQEFIELAKKN--------DIPIRCFYFECDKKLTNHLNTFRALTTNKN 338
Query: 137 -AAAVVNRMLQKKELPKLSEGFSRI 160
A +N +K P+ EGF+ I
Sbjct: 339 IPAIAINVYYKKFVQPRKEEGFTEI 363
>gi|399909160|ref|ZP_10777712.1| Appr-1-p processing protein [Halomonas sp. KM-1]
Length = 174
Score = 45.8 bits (107), Expect = 0.077, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 42/82 (51%), Gaps = 15/82 (18%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVP---LPSTSPL 420
+V+ NAAN +L+ GGG V A+ AAGP LE A A + PG +VI LP+
Sbjct: 19 DVVVNAANAQLRTGGG-VAGALHRAAGPELERACRPLA-PIAPGQAVITEAFGLPN---- 72
Query: 421 CGREGVTHVIHVLGPNMNPRRP 442
HVIH LGP RP
Sbjct: 73 ------RHVIHCLGPVYGHDRP 88
>gi|354722937|ref|ZP_09037152.1| RNase III inhibitor [Enterobacter mori LMG 25706]
Length = 180
Score = 45.8 bits (107), Expect = 0.077, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 45/89 (50%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPA-LEVATAERAKS--LYP 406
GDIT L+ +VI NAAN L GGGGV+ AI AAGP LE A R + P
Sbjct: 10 GDITTLHV------DVIVNAANSSLL-GGGGVDGAIHRAAGPQLLEACKAVRQQQGECPP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI L G VIH +GP
Sbjct: 63 GHAVIT-------LAGDLPAKAVIHAVGP 84
>gi|148262690|ref|YP_001229396.1| appr-1-p processing domain-containing protein [Geobacter
uraniireducens Rf4]
gi|146396190|gb|ABQ24823.1| Appr-1-p processing domain protein [Geobacter uraniireducens Rf4]
Length = 172
Score = 45.8 bits (107), Expect = 0.077, Method: Composition-based stats.
Identities = 45/119 (37%), Positives = 52/119 (43%), Gaps = 29/119 (24%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDITRL + I NAAN L GGGGV+ AI AAGP L VA G++
Sbjct: 10 GDITRL------AVDAIVNAANNTLL-GGGGVDGAIHRAAGPDL-VAECSTLGGCETGDA 61
Query: 410 VIV---PLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFE 465
I LP+ HVIH +GP G E+LRKAY FE
Sbjct: 62 KITKGYKLPA----------KHVIHTVGP--------VWHGGSKGEPELLRKAYRRCFE 102
>gi|384486171|gb|EIE78351.1| hypothetical protein RO3G_03055 [Rhizopus delemar RA 99-880]
Length = 125
Score = 45.4 bits (106), Expect = 0.080, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 75 LKKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQ 133
L KG +V +DRCN +++QR ++ + V + +VL + C R R+ H ++
Sbjct: 7 LDKGLNVVIDRCNFDQQQRKTWIDIAYKYNVPIDCIVLTTAEQECAERIQSRVNHPTGVE 66
Query: 134 GGKAAAVVNRMLQKKELPKLS--EGFSRI 160
G ++ R ++ P + EG RI
Sbjct: 67 GESGVNILKRFMKNYRPPTIDNPEGLERI 95
>gi|302869362|ref|YP_003837999.1| Appr-1-p processing domain-containing protein [Micromonospora
aurantiaca ATCC 27029]
gi|302572221|gb|ADL48423.1| Appr-1-p processing domain protein [Micromonospora aurantiaca ATCC
27029]
Length = 168
Score = 45.4 bits (106), Expect = 0.081, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 43/87 (49%), Gaps = 13/87 (14%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGN 408
+GDITR + + AAN L GGGGV+ AI AAGP L A A A PG+
Sbjct: 6 LGDITREDV------DAVVTAANESLL-GGGGVDGAIHRAAGPRLAQAGAALAPC-DPGD 57
Query: 409 SVIVPLPSTSPLCGREGVTHVIHVLGP 435
+V P P V HVIH +GP
Sbjct: 58 AVATPAFDLDP-----PVRHVIHTVGP 79
>gi|294631978|ref|ZP_06710538.1| protein serine-threonine phosphatase [Streptomyces sp. e14]
gi|292835311|gb|EFF93660.1| protein serine-threonine phosphatase [Streptomyces sp. e14]
Length = 702
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV++VGA GSGKSTF + + + C+ D ++ S L A L
Sbjct: 20 LVVLVGASGSGKSTFARRHFKPTEVISSDFCRGLVSDDENDQSASRDAFDVLHYIAGKRL 79
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D +++ + R ++L DV AVVLD+P ++C R+ R + +
Sbjct: 80 AAGRRTVVDATSVQSDARKQLIEL-ARRYDVLPIAVVLDVPEEVCAERNAARAD-----R 133
Query: 134 GGKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAA 172
V+NR ++ ++ L L EGF ++ + + +++ A
Sbjct: 134 ADLPRRVINRHVRELRRSLRHLEREGFRKVHVLRGVEEIEHA 175
>gi|416484672|ref|ZP_11724296.1| hypothetical protein SEEM675_21927, partial [Salmonella enterica
subsp. enterica serovar Montevideo str. OH_2009072675]
gi|322652231|gb|EFY48589.1| hypothetical protein SEEM675_21927 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
Length = 176
Score = 45.4 bits (106), Expect = 0.083, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDIT+L + I NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 7 GDITQL------SVDAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKLIRQQQGECQT 59
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI P G+ VIH +GP
Sbjct: 60 GHAVITP-------AGKLSAKAVIHTVGP 81
>gi|402843008|ref|ZP_10891411.1| RNase III regulator YmdB [Klebsiella sp. OBRC7]
gi|402278394|gb|EJU27458.1| RNase III regulator YmdB [Klebsiella sp. OBRC7]
Length = 184
Score = 45.4 bits (106), Expect = 0.084, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 45/90 (50%), Gaps = 17/90 (18%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLY 405
+GDITRL +VI NAAN L GGGGV+ AI AAGP L A ++
Sbjct: 9 LGDITRLEV------DVIVNAANPSLL-GGGGVDGAIHRAAGPELLAACKVVRQQQGECP 61
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PG++VI G + VIH +GP
Sbjct: 62 PGHAVITA-------AGNLPASAVIHAVGP 84
>gi|389841441|ref|YP_006343525.1| RNase III inhibitor [Cronobacter sakazakii ES15]
gi|387851917|gb|AFK00015.1| RNase III inhibitor [Cronobacter sakazakii ES15]
Length = 180
Score = 45.4 bits (106), Expect = 0.084, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDITR+ +VI NAAN L GGGGV+ AI AAGPAL A ++ P
Sbjct: 10 GDITRIDA------DVIVNAANPSLM-GGGGVDGAIHRAAGPALLAACRQVRQQQGECQP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI G V+H +GP
Sbjct: 63 GHAVITE-------AGDLAAKAVVHTVGP 84
>gi|380510974|ref|ZP_09854381.1| RNase III inhibitor [Xanthomonas sacchari NCPPB 4393]
Length = 180
Score = 45.4 bits (106), Expect = 0.084, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT+L + I NAAN L GGGGV+ AI AAGP L + R L PG
Sbjct: 8 GDITQLDV------DAIVNAANESLL-GGGGVDGAIHRAAGPEL-LEECRRLPELKPG-- 57
Query: 410 VIVPLPSTSPLCG-REGVTHVIHVLGP 435
V P+ G R HV+H +GP
Sbjct: 58 VRCPVGEVRATAGHRLKARHVLHTVGP 84
>gi|184156280|ref|YP_001844620.1| hypothetical protein LAF_1804 [Lactobacillus fermentum IFO 3956]
gi|260662498|ref|ZP_05863393.1| appr-1-p processing domain-containing protein [Lactobacillus
fermentum 28-3-CHN]
gi|183227624|dbj|BAG28140.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
gi|260553189|gb|EEX26132.1| appr-1-p processing domain-containing protein [Lactobacillus
fermentum 28-3-CHN]
Length = 169
Score = 45.4 bits (106), Expect = 0.084, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 45/89 (50%), Gaps = 21/89 (23%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT+L + I NAAN L+ GGGGV+ AI AAGP L+VA A + G +
Sbjct: 9 GDITKLKV------DAIVNAANTTLR-GGGGVDGAIHRAAGPGLDVACA-KFGGCATGEA 60
Query: 410 VIVP---LPSTSPLCGREGVTHVIHVLGP 435
I P LP+ T +IH GP
Sbjct: 61 RITPGFNLPA----------TFIIHTPGP 79
>gi|423139535|ref|ZP_17127173.1| RNase III regulator YmdB [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|379052089|gb|EHY69980.1| RNase III regulator YmdB [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
Length = 179
Score = 45.4 bits (106), Expect = 0.085, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 45/89 (50%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA--ERAKSLYP- 406
GDIT+L + I NAAN L GGGGV+ AI AAGPAL A R + P
Sbjct: 10 GDITQL------SVDAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKLIRRQQGECPT 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI P G+ VIH +GP
Sbjct: 63 GHAVITP-------AGKLSAKAVIHTVGP 84
>gi|388854761|emb|CCF51654.1| uncharacterized protein [Ustilago hordei]
Length = 336
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
+Q L+++ G GSGKSTF ++ P R C N+ + G + L +A + L G
Sbjct: 48 EQYLLVLSGLIGSGKSTFARALV--DRFPTWRHC----NQDELGDRRAVLYAAQTGLLAG 101
Query: 79 KSVFLDRCNLEREQRTDFVKLGGP---------EVDVHAVVLDLPAKLCISRSVKRIEHE 129
+V +DR N++ +QR +++L ++ ++ L + K R R +HE
Sbjct: 102 HNVVIDRTNIDAKQRRTWLELAQEISSAEGSTRKIITISLTLTISIKAAQERLRIRKDHE 161
Query: 130 GNLQGGKAAAVVNRMLQKKELPKLSEGFSRI 160
+A ++ L+ + EGF +
Sbjct: 162 TIKTAEQALEILPHFLRTYQKATTEEGFHYV 192
>gi|432894949|ref|XP_004076011.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase-like
[Oryzias latipes]
Length = 602
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 22 LVIMVGAPGSGKSTFCE-HVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+++ VG P SGKSTF HV+ + + + +DT+ G+ +C+ AL +G+S
Sbjct: 445 VIVAVGYPASGKSTFFHAHVI---PKGYFYVNRDTL-----GSWQKCVAVCERALSEGRS 496
Query: 81 VFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
V +D N + E R +V + V A L ++ R G A
Sbjct: 497 VAVDNTNPDPESRKRYVDVAK-AAGVSCRCFHFSASLEQAKHNNRFREMAPSDGKHAK-- 553
Query: 141 VNRML---QKKEL--PKLSEGFSRI 160
VN M+ KK P LSEGFS I
Sbjct: 554 VNEMVFHSYKKHFVAPALSEGFSEI 578
>gi|379724558|ref|YP_005316689.1| hypothetical protein PM3016_6949 [Paenibacillus mucilaginosus 3016]
gi|378573230|gb|AFC33540.1| hypothetical protein PM3016_6949 [Paenibacillus mucilaginosus 3016]
Length = 189
Score = 45.4 bits (106), Expect = 0.087, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 56/133 (42%), Gaps = 25/133 (18%)
Query: 335 AAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALE 394
AA + F GDITR+ + I NAAN L GGGGV+ AI A G A+
Sbjct: 3 AAAVTVGNVSFEVMRGDITRVKA------DAIVNAANSSLL-GGGGVDGAIHRAGGRAIL 55
Query: 395 ---VATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVK 451
+ R PG +VI G+ +HVIH +GP N G
Sbjct: 56 DDCIRIRSRQGGCPPGEAVITT-------GGKLPASHVIHTVGPVWN--------GGTQG 100
Query: 452 GCEILRKAYTSLF 464
E+LR+ Y S+
Sbjct: 101 EAEVLRRCYRSVL 113
>gi|159899502|ref|YP_001545749.1| metallophosphoesterase [Herpetosiphon aurantiacus DSM 785]
gi|159892541|gb|ABX05621.1| metallophosphoesterase [Herpetosiphon aurantiacus DSM 785]
Length = 854
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQC------LTSASSAL 75
LV++VGA GSGKSTF + + + + C+ + ++ V T A+ L
Sbjct: 10 LVVLVGASGSGKSTFAQRYFKPTEIISSDACRAMLTDDETDQSVSADAFDLVYTIAAKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKR 125
G+ +D N++ E R + L V A+VL P ++C+ R++ R
Sbjct: 70 ALGRLTVIDATNVQAEARKPLLALARHYHVWPVAIVLHTPERVCLERNLGR 120
>gi|365139597|ref|ZP_09345944.1| UPF0189 protein ymdB [Klebsiella sp. 4_1_44FAA]
gi|378978095|ref|YP_005226236.1| hypothetical protein KPHS_19360 [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|402781421|ref|YP_006636967.1| hypothetical protein A79E_3172 [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|419971803|ref|ZP_14487233.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419980842|ref|ZP_14496123.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419986096|ref|ZP_14501232.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419989666|ref|ZP_14504641.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419994914|ref|ZP_14509722.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420003984|ref|ZP_14518625.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420009738|ref|ZP_14524219.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420014711|ref|ZP_14529016.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420018967|ref|ZP_14533162.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420026678|ref|ZP_14540678.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420031460|ref|ZP_14545281.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420038241|ref|ZP_14551889.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420044280|ref|ZP_14557761.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420050216|ref|ZP_14563518.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420055593|ref|ZP_14568758.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420062592|ref|ZP_14575559.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420066149|ref|ZP_14578951.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420070753|ref|ZP_14583403.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420078997|ref|ZP_14591449.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420083253|ref|ZP_14595537.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421909182|ref|ZP_16339004.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421913859|ref|ZP_16343523.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
gi|425090946|ref|ZP_18494031.1| UPF0189 protein ymdB [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|428148936|ref|ZP_18996777.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428939486|ref|ZP_19012594.1| RNase III inhibitor [Klebsiella pneumoniae VA360]
gi|363654210|gb|EHL93125.1| UPF0189 protein ymdB [Klebsiella sp. 4_1_44FAA]
gi|364517506|gb|AEW60634.1| hypothetical protein KPHS_19360 [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397344551|gb|EJJ37683.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397349463|gb|EJJ42557.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397352741|gb|EJJ45819.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397367431|gb|EJJ60042.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397368687|gb|EJJ61292.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397369165|gb|EJJ61767.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397377727|gb|EJJ69953.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397380696|gb|EJJ72875.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397389628|gb|EJJ81561.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397394710|gb|EJJ86431.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397400329|gb|EJJ91974.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397404394|gb|EJJ95902.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397411811|gb|EJK03060.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397412047|gb|EJK03287.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397421446|gb|EJK12458.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397427611|gb|EJK18378.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397430419|gb|EJK21114.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397441257|gb|EJK31637.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397444303|gb|EJK34586.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397451344|gb|EJK41430.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|402539208|gb|AFQ63357.1| hypothetical protein A79E_3172 [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|405613103|gb|EKB85851.1| UPF0189 protein ymdB [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|410117026|emb|CCM81629.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410123840|emb|CCM86148.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
gi|426303928|gb|EKV66085.1| RNase III inhibitor [Klebsiella pneumoniae VA360]
gi|427541112|emb|CCM92915.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
Length = 175
Score = 45.4 bits (106), Expect = 0.089, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 46/90 (51%), Gaps = 17/90 (18%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLY 405
+GDIT L +VI NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 9 LGDITTLDV------DVIVNAANPSLL-GGGGVDGAIHRAAGPALLAACKQVLQQQGECP 61
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PG++VI + G + VIH +GP
Sbjct: 62 PGHAVIT-------IAGNLPASAVIHTVGP 84
>gi|366163210|ref|ZP_09462965.1| metallophosphoesterase [Acetivibrio cellulolyticus CD2]
Length = 868
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 26/191 (13%)
Query: 22 LVIMVGAPGSGKSTFCEHVMR-----SSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
L++++G+ G GKSTF + SS A + D ++ + T + L A+ L
Sbjct: 10 LIVLIGSSGCGKSTFASKHFKPTEVISSDFCRALVSDDDNDQTVTNTAFEVLHYIAAKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHEGN 131
K GK +D N++ R V+L + H AVV DLP ++C R+ R + +
Sbjct: 70 KLGKLTVVDATNVQEAARKPLVQLAR---EYHCLPVAVVFDLPERVCQDRNKNRTDRQ-- 124
Query: 132 LQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGL--------GPLD 183
G ++ L+K EGF + + + +V+ + L GP D
Sbjct: 125 -VGEHVIRKHSQQLRKSIRTLQKEGFRYVYVLNSPEEVEQVVFERQPLWNNLKHEHGPFD 183
Query: 184 TL--PHGSFGQ 192
+ HG F +
Sbjct: 184 IIGDVHGCFDE 194
>gi|299749719|ref|XP_001836289.2| Macrod2 protein [Coprinopsis cinerea okayama7#130]
gi|298408568|gb|EAU85473.2| Macrod2 protein [Coprinopsis cinerea okayama7#130]
Length = 274
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 55/119 (46%), Gaps = 28/119 (23%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT+L + I NAAN L GGGGV+ AI +AAGP L +A ++ G S
Sbjct: 106 GDITKLQ------VDAIVNAANKSLL-GGGGVDGAIHAAAGPKL-LAECKQLNGARTGES 157
Query: 410 VIV---PLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFE 465
I LP+ HVIH +GP N +P + E+L+ Y + E
Sbjct: 158 KITRGYDLPA----------RHVIHTVGPVYNASQPE-------EKAELLKSCYKTSLE 199
>gi|168237224|ref|ZP_02662282.1| protein YmdB [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194737747|ref|YP_002114145.1| hypothetical protein SeSA_A1214 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|194713249|gb|ACF92470.1| protein YmdB [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197289874|gb|EDY29235.1| protein YmdB [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 179
Score = 45.4 bits (106), Expect = 0.090, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 54/114 (47%), Gaps = 25/114 (21%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDIT+L + I NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 10 GDITQL------SVDAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKLIRQQQGECQT 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAY 460
G++VI P G+ VIH +GP G+Y + E+L +AY
Sbjct: 63 GHAVITP-------AGKLSAKAVIHTVGPVWR-------GGEY-QEAELLEEAY 101
>gi|443623353|ref|ZP_21107854.1| putative Phosphatase [Streptomyces viridochromogenes Tue57]
gi|443343177|gb|ELS57318.1| putative Phosphatase [Streptomyces viridochromogenes Tue57]
Length = 846
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 25/166 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTIN---KGKSGTK--VQCLTS-ASSAL 75
LV++VGA GSGKSTF + + + C+ ++ +S T+ L A L
Sbjct: 17 LVVLVGASGSGKSTFARRHFKPTEVISSDFCRGLVSDDENDQSATRDAFDVLHYIAGKRL 76
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D +++++ R + L + DV A+VLD+P ++C R+ R +
Sbjct: 77 AAGRRTVVDATSVQQDARRQLIDL-AKKYDVLPIAIVLDVPEEVCAERNAARTDR----- 130
Query: 134 GGKAAAVVNRMLQK--KELPKL-----SEGFSRITLCQNENDVQAA 172
A + R++Q+ +EL + EGF ++ + + +D++ A
Sbjct: 131 ----ADMPRRVIQRHTRELRRSLRHLEREGFRKVHVLRGVDDIENA 172
>gi|443313731|ref|ZP_21043341.1| polynucleotide kinase-phosphatase [Synechocystis sp. PCC 7509]
gi|442776144|gb|ELR86427.1| polynucleotide kinase-phosphatase [Synechocystis sp. PCC 7509]
Length = 855
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 18/180 (10%)
Query: 22 LVIMVGAPGSGKSTFCEHVMR-----SSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA G+GKS+F + + SS IC D N+ S + A+ L
Sbjct: 10 LVVLIGASGAGKSSFAKKHFKPTEVISSDFCRGLICDDENNQAVSKDAFAVVHYIAAKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHEGN 131
GK +D N+++E R ++L + H A+ L+LP LC R+ +H +
Sbjct: 70 AAGKLTVVDATNVQKEDRKHLLELAK---EYHCLPVAIALNLPEYLCSDRN----QHRPD 122
Query: 132 LQGGKAAAVVNRMLQKKELPKLS-EGFSRITLCQNENDVQAALDTYSGLGPLDTLPHGSF 190
G R ++ L L EGF + + D++A L HG F
Sbjct: 123 RNFGIHVIKRQREAMRQSLKHLKREGFRYSYILNSVEDIEAVSIHLQPLWNNRKTEHGPF 182
>gi|388854179|emb|CCF52098.1| related to bifunctional polynucleotide phosphatase/kinase [Ustilago
hordei]
Length = 490
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 60/143 (41%), Gaps = 15/143 (10%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VGAP SGK+ + + + + + QDT+ T+ +CL + + +S
Sbjct: 330 IVLFVGAPASGKTYLFNRIF--APQNYVHVNQDTLR-----TRDKCLRVVADTITSSQSC 382
Query: 82 FLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAA-- 138
+D N +R R ++ L + + D+P +C+ + R H G +
Sbjct: 383 VVDNTNRDRATRKHYIDLARNINARIRCIYFDVPKHVCVHNNHFR-AHYGPTNESEVKRT 441
Query: 139 ----AVVNRMLQKKELPKLSEGF 157
+ + + PK +EGF
Sbjct: 442 ILPFTAIESWFKDSQPPKQAEGF 464
>gi|206577665|ref|YP_002239320.1| hypothetical protein KPK_3497 [Klebsiella pneumoniae 342]
gi|288936174|ref|YP_003440233.1| Appr-1-p processing domain-containing protein [Klebsiella variicola
At-22]
gi|290510772|ref|ZP_06550142.1| hypothetical protein HMPREF0485_02543 [Klebsiella sp. 1_1_55]
gi|334351228|sp|B5XXK9.1|YMDB_KLEP3 RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|334351229|sp|D3RKJ0.1|YMDB_KLEVT RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|206566723|gb|ACI08499.1| Appr-1-p processing enzyme domain protein [Klebsiella pneumoniae
342]
gi|288890883|gb|ADC59201.1| Appr-1-p processing domain protein [Klebsiella variicola At-22]
gi|289777488|gb|EFD85486.1| hypothetical protein HMPREF0485_02543 [Klebsiella sp. 1_1_55]
Length = 175
Score = 45.4 bits (106), Expect = 0.092, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 46/90 (51%), Gaps = 17/90 (18%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLY 405
+GDIT L +VI NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 9 LGDITTLEV------DVIVNAANPSLL-GGGGVDGAIHRAAGPALLAACKQVLQQQGECP 61
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PG++VI + G + VIH +GP
Sbjct: 62 PGHAVIT-------IAGDLPASAVIHTVGP 84
>gi|437833577|ref|ZP_20844743.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|435302088|gb|ELO78077.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
Length = 179
Score = 45.4 bits (106), Expect = 0.093, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDIT+L + I NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 10 GDITQL------SVDAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKLIRQQQGECQT 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI P G+ VIH +GP
Sbjct: 63 GHAVITP-------AGKLSAKAVIHTVGP 84
>gi|205353114|ref|YP_002226915.1| hypothetical protein SG1975 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|334351231|sp|B5RBF3.1|YMDB_SALG2 RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|205272895|emb|CAR37825.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
Length = 179
Score = 45.4 bits (106), Expect = 0.093, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 53/116 (45%), Gaps = 25/116 (21%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDIT+L + I NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 10 GDITQL------SVDAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKLIRQQQGECQT 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTS 462
G++VI P G+ VIH +GP G + E+L +AY S
Sbjct: 63 GHAVITP-------AGKLSAKAVIHTVGP--------VWRGGEHQEAELLEEAYRS 103
>gi|443925400|gb|ELU44242.1| KTI12 domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 157
Score = 45.4 bits (106), Expect = 0.094, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 10/109 (9%)
Query: 21 ILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
IL+++ G GSGKSTF + R P R C N+ + G + +AL +G S
Sbjct: 38 ILIVLCGLVGSGKSTFATALQREF--PEVRRC----NQDELGRREDVEREVHAALSQGLS 91
Query: 81 VFLDRCNLEREQRTDFVKLG--GPEVDVHAVVLDLP--AKLCISRSVKR 125
V +DR N + QR ++ + +++ + +D P +C S + +R
Sbjct: 92 VCVDRTNFDPGQRRTWIDIARQHSNIEIWGITMDTPFDVGVCYSNNTRR 140
>gi|197250409|ref|YP_002146897.1| hypothetical protein SeAg_B2042 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|375001778|ref|ZP_09726118.1| RNase III regulator YmdB [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|440761837|ref|ZP_20940905.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|440767491|ref|ZP_20946468.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|440773942|ref|ZP_20952830.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|334351230|sp|B5F961.1|YMDB_SALA4 RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|197214112|gb|ACH51509.1| protein YmdB [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|353076466|gb|EHB42226.1| RNase III regulator YmdB [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|436413460|gb|ELP11393.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|436419883|gb|ELP17755.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|436424447|gb|ELP22221.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
Length = 179
Score = 45.4 bits (106), Expect = 0.094, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDIT+L + I NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 10 GDITQL------SVDAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKLIRQQQGECQT 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI P G+ VIH +GP
Sbjct: 63 GHAVITP-------AGKLSAKAVIHTVGP 84
>gi|449061505|ref|ZP_21738919.1| RNase III inhibitor [Klebsiella pneumoniae hvKP1]
gi|448872975|gb|EMB08103.1| RNase III inhibitor [Klebsiella pneumoniae hvKP1]
Length = 175
Score = 45.4 bits (106), Expect = 0.094, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 46/90 (51%), Gaps = 17/90 (18%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLY 405
+GDIT L +VI NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 9 LGDITTLDV------DVIVNAANPSLL-GGGGVDGAIHRAAGPALLAACKQVLQQQGECP 61
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PG++VI + G + VIH +GP
Sbjct: 62 PGHAVIT-------IAGNLPASAVIHTVGP 84
>gi|337751603|ref|YP_004645765.1| hypothetical protein KNP414_07391 [Paenibacillus mucilaginosus
KNP414]
gi|336302792|gb|AEI45895.1| hypothetical protein KNP414_07391 [Paenibacillus mucilaginosus
KNP414]
Length = 189
Score = 45.4 bits (106), Expect = 0.094, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 56/133 (42%), Gaps = 25/133 (18%)
Query: 335 AAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALE 394
AA + F GDITR+ + I NAAN L GGGGV+ AI A G A+
Sbjct: 3 AAAVTVGNVSFEVMRGDITRVKA------DAIVNAANSSLL-GGGGVDGAIHRAGGRAIL 55
Query: 395 ---VATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVK 451
+ R PG +VI G+ +HVIH +GP N G
Sbjct: 56 DDCIRIRSRQGGCPPGEAVITT-------GGKLPASHVIHTVGPVWN--------GGTQG 100
Query: 452 GCEILRKAYTSLF 464
E+LR+ Y S+
Sbjct: 101 EAEVLRRCYRSVL 113
>gi|423102464|ref|ZP_17090166.1| hypothetical protein HMPREF9686_01070 [Klebsiella oxytoca 10-5242]
gi|376387940|gb|EHT00641.1| hypothetical protein HMPREF9686_01070 [Klebsiella oxytoca 10-5242]
Length = 184
Score = 45.4 bits (106), Expect = 0.096, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 45/90 (50%), Gaps = 17/90 (18%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLY 405
+GDITRL +VI NAAN L GGGGV+ AI AAGP L A ++
Sbjct: 9 LGDITRLEV------DVIVNAANPSLL-GGGGVDGAIHRAAGPELLAACKVVRQQQGECP 61
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PG++VI G + VIH +GP
Sbjct: 62 PGHAVITA-------AGNLPASAVIHAVGP 84
>gi|152969614|ref|YP_001334723.1| hypothetical protein KPN_01060 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|386034241|ref|YP_005954154.1| RNase III inhibitor [Klebsiella pneumoniae KCTC 2242]
gi|424830037|ref|ZP_18254765.1| Appr-1-p processing enzyme domain protein [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
gi|425077298|ref|ZP_18480401.1| hypothetical protein HMPREF1305_03211 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425080884|ref|ZP_18483981.1| hypothetical protein HMPREF1306_01632 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425087931|ref|ZP_18491024.1| hypothetical protein HMPREF1307_03380 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|428933871|ref|ZP_19007411.1| RNase III inhibitor [Klebsiella pneumoniae JHCK1]
gi|428937273|ref|ZP_19010584.1| RNase III inhibitor [Klebsiella pneumoniae JHCK1]
gi|150954463|gb|ABR76493.1| hypothetical protein KPN_01060 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|339761369|gb|AEJ97589.1| RNase III inhibitor [Klebsiella pneumoniae KCTC 2242]
gi|405593007|gb|EKB66459.1| hypothetical protein HMPREF1305_03211 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405604655|gb|EKB77776.1| hypothetical protein HMPREF1307_03380 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405604694|gb|EKB77801.1| hypothetical protein HMPREF1306_01632 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|414707462|emb|CCN29166.1| Appr-1-p processing enzyme domain protein [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
gi|426296620|gb|EKV59223.1| RNase III inhibitor [Klebsiella pneumoniae JHCK1]
gi|426304206|gb|EKV66356.1| RNase III inhibitor [Klebsiella pneumoniae JHCK1]
Length = 175
Score = 45.4 bits (106), Expect = 0.096, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 46/90 (51%), Gaps = 17/90 (18%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLY 405
+GDIT L +VI NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 9 LGDITTLDV------DVIVNAANPSLL-GGGGVDGAIHRAAGPALLAACKQVLQQQGECP 61
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PG++VI + G + VIH +GP
Sbjct: 62 PGHAVIT-------IAGNLPASAVIHTVGP 84
>gi|345298749|ref|YP_004828107.1| Appr-1-p processing protein [Enterobacter asburiae LF7a]
gi|345092686|gb|AEN64322.1| Appr-1-p processing domain protein [Enterobacter asburiae LF7a]
Length = 180
Score = 45.4 bits (106), Expect = 0.097, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDIT L+ +VI NAAN L GGGGV+ AI AAGP L A ++ P
Sbjct: 10 GDITTLHV------DVIVNAANPSLM-GGGGVDGAIHRAAGPQLLEACKVVRQQQGECPP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI L G VIH +GP
Sbjct: 63 GHAVIT-------LAGNLPAKAVIHTVGP 84
>gi|375260216|ref|YP_005019386.1| RNase III inhibitor [Klebsiella oxytoca KCTC 1686]
gi|397657296|ref|YP_006497998.1| macro domain-containing protein [Klebsiella oxytoca E718]
gi|365909694|gb|AEX05147.1| RNase III inhibitor [Klebsiella oxytoca KCTC 1686]
gi|394343360|gb|AFN29481.1| Macro domain protein [Klebsiella oxytoca E718]
Length = 184
Score = 45.4 bits (106), Expect = 0.098, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 45/90 (50%), Gaps = 17/90 (18%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLY 405
+GDITRL +VI NAAN L GGGGV+ AI AAGP L A ++
Sbjct: 9 LGDITRLEV------DVIVNAANPSLL-GGGGVDGAIHRAAGPELLAACKVVRQQQGECP 61
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PG++VI G + VIH +GP
Sbjct: 62 PGHAVITA-------AGNLPASAVIHAVGP 84
>gi|449543500|gb|EMD34476.1| hypothetical protein CERSUDRAFT_67454 [Ceriporiopsis subvermispora
B]
Length = 410
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 17/152 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LV+ VG P GKSTF + +A + QDT+ T+ +C+ +A L++G++
Sbjct: 245 LVLFVGPPALGKSTFFRRHFAPAG--YAHVNQDTLK-----TRDKCVRAARDVLQEGRAA 297
Query: 82 FLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKR--------IEHEGNL 132
+D N +R R +V + V V + +L S+ R +E E
Sbjct: 298 VVDNTNRDRATRKLYVDIARAAGVPVRCFLFTGSVELAWHNSLYRAYNLPPALVESEPKR 357
Query: 133 QGGKAAAVVNRMLQKKELPKLSEGFSRITLCQ 164
+ A + +E P L EGF+ + Q
Sbjct: 358 EALPYMAFTSFRAAYEE-PALDEGFAELRRVQ 388
>gi|386727302|ref|YP_006193628.1| hypothetical protein B2K_35040 [Paenibacillus mucilaginosus K02]
gi|384094427|gb|AFH65863.1| hypothetical protein B2K_35040 [Paenibacillus mucilaginosus K02]
Length = 189
Score = 45.4 bits (106), Expect = 0.098, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 56/133 (42%), Gaps = 25/133 (18%)
Query: 335 AAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALE 394
AA + F GDITR+ + I NAAN L GGGGV+ AI A G A+
Sbjct: 3 AAAVTVGNVSFEVMRGDITRVKA------DAIVNAANSSLL-GGGGVDGAIHRAGGRAIL 55
Query: 395 ---VATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVK 451
+ R PG +VI G+ +HVIH +GP N G
Sbjct: 56 DDCIRIRSRQGGCPPGEAVITT-------GGKLPASHVIHTVGPVWN--------GGTQG 100
Query: 452 GCEILRKAYTSLF 464
E+LR+ Y S+
Sbjct: 101 EAEVLRRCYRSVL 113
>gi|383419379|gb|AFH32903.1| poly [ADP-ribose] polymerase 14 [Macaca mulatta]
Length = 1800
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 46/103 (44%), Gaps = 24/103 (23%)
Query: 361 LCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV---ATAERAKSLYPGNSVIVPLPST 417
L +V+ NA+N LK GG+ AA+ AAGP L+ +R L PGN++I
Sbjct: 814 LPVDVVVNASNEDLK-HYGGLAAALSKAAGPELQADCDQIVKREGRLLPGNAIISK---- 868
Query: 418 SPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAY 460
G+ HVIH +GP N GCE R Y
Sbjct: 869 ---AGKLPYHHVIHAVGPRWN-------------GCEAPRCVY 895
>gi|416422090|ref|ZP_11689994.1| hypothetical protein SEEM315_12958 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416431609|ref|ZP_11695763.1| hypothetical protein SEEM971_17952 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416441412|ref|ZP_11701624.1| hypothetical protein SEEM973_13010 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416443702|ref|ZP_11703178.1| hypothetical protein SEEM974_04711 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416452690|ref|ZP_11709185.1| hypothetical protein SEEM201_15320 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416459118|ref|ZP_11713627.1| hypothetical protein SEEM202_01615 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416467609|ref|ZP_11717521.1| hypothetical protein SEEM954_01988 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416481789|ref|ZP_11723470.1| hypothetical protein SEEM054_18295 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416500223|ref|ZP_11731294.1| hypothetical protein SEEM965_12257 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416505484|ref|ZP_11733918.1| hypothetical protein SEEM031_22125 [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416523399|ref|ZP_11741076.1| hypothetical protein SEEM710_19931 [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416545581|ref|ZP_11753375.1| hypothetical protein SEEM19N_16122 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|416558255|ref|ZP_11760131.1| hypothetical protein SEEM42N_14029 [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|416566152|ref|ZP_11763706.1| hypothetical protein SEEM41H_03913 [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|416578272|ref|ZP_11770392.1| hypothetical protein SEEM801_11417 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416582208|ref|ZP_11772482.1| hypothetical protein SEEM507_18184 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416589097|ref|ZP_11776797.1| hypothetical protein SEEM877_10822 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416599248|ref|ZP_11783482.1| hypothetical protein SEEM867_07351 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416604747|ref|ZP_11786368.1| hypothetical protein SEEM180_06387 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416612203|ref|ZP_11791345.1| hypothetical protein SEEM600_11237 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416618890|ref|ZP_11794740.1| hypothetical protein SEEM581_02801 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416631576|ref|ZP_11801201.1| hypothetical protein SEEM501_03137 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416640539|ref|ZP_11805049.1| hypothetical protein SEEM460_02976 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416650315|ref|ZP_11810423.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416663582|ref|ZP_11816248.1| hypothetical protein SEEM6152_19428 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|416666085|ref|ZP_11817236.1| hypothetical protein SEEM0077_05649 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416676604|ref|ZP_11821892.1| hypothetical protein SEEM0047_04349 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|416697352|ref|ZP_11828191.1| hypothetical protein SEEM0055_17485 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|416707331|ref|ZP_11832429.1| hypothetical protein SEEM0052_12692 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416714629|ref|ZP_11837947.1| hypothetical protein SEEM3312_02644 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416716407|ref|ZP_11838754.1| hypothetical protein SEEM5258_12254 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416725309|ref|ZP_11845679.1| hypothetical protein SEEM1156_20089 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416731888|ref|ZP_11849574.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416738678|ref|ZP_11853436.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416749677|ref|ZP_11859364.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|416756066|ref|ZP_11862424.1| hypothetical protein SEEM8284_12147 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|416761794|ref|ZP_11865844.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416770657|ref|ZP_11871996.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|418482356|ref|ZP_13051375.1| hypothetical protein SEEM906_16879 [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418490569|ref|ZP_13057112.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|418495333|ref|ZP_13061775.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418499044|ref|ZP_13065454.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418502069|ref|ZP_13068445.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418507568|ref|ZP_13073888.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418526923|ref|ZP_13092882.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|322616517|gb|EFY13426.1| hypothetical protein SEEM315_12958 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322619769|gb|EFY16644.1| hypothetical protein SEEM971_17952 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622536|gb|EFY19381.1| hypothetical protein SEEM973_13010 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629687|gb|EFY26462.1| hypothetical protein SEEM974_04711 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632593|gb|EFY29339.1| hypothetical protein SEEM201_15320 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322636912|gb|EFY33615.1| hypothetical protein SEEM202_01615 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322641550|gb|EFY38188.1| hypothetical protein SEEM954_01988 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322644039|gb|EFY40585.1| hypothetical protein SEEM054_18295 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322653985|gb|EFY50308.1| hypothetical protein SEEM965_12257 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322658517|gb|EFY54779.1| hypothetical protein SEEM19N_16122 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663375|gb|EFY59577.1| hypothetical protein SEEM801_11417 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322670109|gb|EFY66249.1| hypothetical protein SEEM507_18184 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674826|gb|EFY70917.1| hypothetical protein SEEM877_10822 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322676703|gb|EFY72770.1| hypothetical protein SEEM867_07351 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682625|gb|EFY78644.1| hypothetical protein SEEM180_06387 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686622|gb|EFY82601.1| hypothetical protein SEEM600_11237 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323195736|gb|EFZ80912.1| hypothetical protein SEEM581_02801 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198114|gb|EFZ83228.1| hypothetical protein SEEM501_03137 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203144|gb|EFZ88174.1| hypothetical protein SEEM460_02976 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323209652|gb|EFZ94581.1| hypothetical protein SEEM6152_19428 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323217893|gb|EGA02608.1| hypothetical protein SEEM0077_05649 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222180|gb|EGA06564.1| hypothetical protein SEEM0047_04349 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224951|gb|EGA09209.1| hypothetical protein SEEM0055_17485 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323229695|gb|EGA13818.1| hypothetical protein SEEM0052_12692 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323232920|gb|EGA17016.1| hypothetical protein SEEM3312_02644 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240655|gb|EGA24697.1| hypothetical protein SEEM5258_12254 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323242968|gb|EGA26989.1| hypothetical protein SEEM1156_20089 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323247660|gb|EGA31605.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323252661|gb|EGA36499.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323255702|gb|EGA39454.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323261739|gb|EGA45311.1| hypothetical protein SEEM8284_12147 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323266909|gb|EGA50394.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323269951|gb|EGA53400.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|363550135|gb|EHL34464.1| hypothetical protein SEEM710_19931 [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363556418|gb|EHL40633.1| hypothetical protein SEEM031_22125 [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363577307|gb|EHL61132.1| hypothetical protein SEEM42N_14029 [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|363579721|gb|EHL63497.1| hypothetical protein SEEM41H_03913 [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|366059189|gb|EHN23463.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366064042|gb|EHN28252.1| hypothetical protein SEEM906_16879 [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366065930|gb|EHN30111.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366072587|gb|EHN36677.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366076516|gb|EHN40554.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366081089|gb|EHN45041.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366828498|gb|EHN55385.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372205174|gb|EHP18699.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
Length = 179
Score = 45.4 bits (106), Expect = 0.098, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDIT+L + I NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 10 GDITQL------SVDAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKLIRQQQGECQT 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI P G+ VIH +GP
Sbjct: 63 GHAVITP-------AGKLSAKAVIHTVGP 84
>gi|204930899|ref|ZP_03221772.1| protein YmdB [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|416527632|ref|ZP_11743407.1| hypothetical protein SEEM010_21254 [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416535489|ref|ZP_11747743.1| hypothetical protein SEEM030_07683 [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416551080|ref|ZP_11756335.1| hypothetical protein SEEM29N_00115 [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|417357249|ref|ZP_12132481.1| hypothetical protein LTSEGIV_1548 [Salmonella enterica subsp.
enterica serovar Give str. S5-487]
gi|452120690|ref|YP_007470938.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|204320358|gb|EDZ05562.1| protein YmdB [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|353594355|gb|EHC51894.1| hypothetical protein LTSEGIV_1548 [Salmonella enterica subsp.
enterica serovar Give str. S5-487]
gi|363555479|gb|EHL39705.1| hypothetical protein SEEM010_21254 [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363565697|gb|EHL49721.1| hypothetical protein SEEM030_07683 [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|363567161|gb|EHL51162.1| hypothetical protein SEEM29N_00115 [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|451909694|gb|AGF81500.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 179
Score = 45.4 bits (106), Expect = 0.098, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDIT+L + I NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 10 GDITQL------SVDAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKLIRQQQGECQT 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI P G+ VIH +GP
Sbjct: 63 GHAVITP-------AGKLSAKAVIHTVGP 84
>gi|161614635|ref|YP_001588600.1| hypothetical protein SPAB_02385 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|168244740|ref|ZP_02669672.1| protein YmdB [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168264066|ref|ZP_02686039.1| protein YmdB [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|194443183|ref|YP_002040400.1| hypothetical protein SNSL254_A1243 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194449140|ref|YP_002045145.1| hypothetical protein SeHA_C1258 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|238911033|ref|ZP_04654870.1| hypothetical protein SentesTe_07837 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|386591011|ref|YP_006087411.1| Macro domain, possibly ADP-ribose binding module [Salmonella
enterica subsp. enterica serovar Heidelberg str. B182]
gi|417364881|ref|ZP_12137691.1| hypothetical protein LTSEHVI_1813 [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
gi|418513619|ref|ZP_13079847.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|418789746|ref|ZP_13345532.1| hypothetical protein SEEN447_02453 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|418795600|ref|ZP_13351301.1| hypothetical protein SEEN449_12585 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418798337|ref|ZP_13354014.1| hypothetical protein SEEN567_14581 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|418808686|ref|ZP_13364239.1| hypothetical protein SEEN550_03215 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418812842|ref|ZP_13368363.1| hypothetical protein SEEN513_04792 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418817075|ref|ZP_13372563.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|418820517|ref|ZP_13375950.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|418827036|ref|ZP_13382200.1| hypothetical protein SEEN462_05957 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|418832945|ref|ZP_13387879.1| hypothetical protein SEEN486_07683 [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418836238|ref|ZP_13391125.1| hypothetical protein SEEN543_15063 [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418839652|ref|ZP_13394486.1| hypothetical protein SEEN554_06060 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418845463|ref|ZP_13400247.1| hypothetical protein SEEN443_01953 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|418848205|ref|ZP_13402944.1| hypothetical protein SEEN978_08719 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418855607|ref|ZP_13410263.1| hypothetical protein SEEN593_05424 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418858623|ref|ZP_13413237.1| hypothetical protein SEEN470_02765 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|418863844|ref|ZP_13418380.1| hypothetical protein SEEN536_14961 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|418868783|ref|ZP_13423224.1| hypothetical protein SEEN176_03294 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|419729396|ref|ZP_14256354.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419736304|ref|ZP_14263155.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419737656|ref|ZP_14264428.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419746233|ref|ZP_14272832.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419750770|ref|ZP_14277216.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|421569434|ref|ZP_16015137.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421573616|ref|ZP_16019251.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421578638|ref|ZP_16024212.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421582485|ref|ZP_16028021.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|421883135|ref|ZP_16314376.1| hypothetical protein SS209_00316 [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|334351232|sp|B4T2X8.1|YMDB_SALNS RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|161363999|gb|ABX67767.1| hypothetical protein SPAB_02385 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194401846|gb|ACF62068.1| protein YmdB [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194407444|gb|ACF67663.1| protein YmdB [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|205336420|gb|EDZ23184.1| protein YmdB [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205347349|gb|EDZ33980.1| protein YmdB [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|353595946|gb|EHC53062.1| hypothetical protein LTSEHVI_1813 [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
gi|366081465|gb|EHN45409.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|379987248|emb|CCF86649.1| hypothetical protein SS209_00316 [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|381292443|gb|EIC33646.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381296970|gb|EIC38069.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381304130|gb|EIC45140.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|381304178|gb|EIC45185.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381305770|gb|EIC46679.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|383798055|gb|AFH45137.1| Macro domain, possibly ADP-ribose binding module [Salmonella
enterica subsp. enterica serovar Heidelberg str. B182]
gi|392758128|gb|EJA15003.1| hypothetical protein SEEN449_12585 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392760091|gb|EJA16931.1| hypothetical protein SEEN447_02453 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392766994|gb|EJA23766.1| hypothetical protein SEEN567_14581 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|392774068|gb|EJA30763.1| hypothetical protein SEEN513_04792 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392775369|gb|EJA32061.1| hypothetical protein SEEN550_03215 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392789243|gb|EJA45763.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|392792786|gb|EJA49240.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|392797015|gb|EJA53343.1| hypothetical protein SEEN486_07683 [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392802064|gb|EJA58284.1| hypothetical protein SEEN543_15063 [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392802168|gb|EJA58387.1| hypothetical protein SEEN462_05957 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|392812529|gb|EJA68518.1| hypothetical protein SEEN554_06060 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392812836|gb|EJA68812.1| hypothetical protein SEEN443_01953 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392821665|gb|EJA77489.1| hypothetical protein SEEN593_05424 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392823517|gb|EJA79313.1| hypothetical protein SEEN978_08719 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392831693|gb|EJA87320.1| hypothetical protein SEEN536_14961 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|392832594|gb|EJA88214.1| hypothetical protein SEEN470_02765 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|392837473|gb|EJA93043.1| hypothetical protein SEEN176_03294 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|402524151|gb|EJW31456.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402527276|gb|EJW34539.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402527462|gb|EJW34724.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402532952|gb|EJW40137.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
Length = 179
Score = 45.4 bits (106), Expect = 0.098, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDIT+L + I NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 10 GDITQL------SVDAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKLIRQQQGECQT 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI P G+ VIH +GP
Sbjct: 63 GHAVITP-------AGKLSAKAVIHTVGP 84
>gi|261406557|ref|YP_003242798.1| metal dependent phosphohydrolase [Paenibacillus sp. Y412MC10]
gi|261283020|gb|ACX64991.1| metal dependent phosphohydrolase [Paenibacillus sp. Y412MC10]
Length = 321
Score = 45.4 bits (106), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 22/160 (13%)
Query: 24 IMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKV----------QCLTSASS 73
++VG PGSGKS + + + +S + D I + G++ +
Sbjct: 6 MLVGIPGSGKSYYAKQLCKSERAVL--VATDAIRERLFGSESKQKNTYMVFDEAFAEIEE 63
Query: 74 ALKKGKSVFLDRCNLEREQRTDFVK-LGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNL 132
ALK ++V D N+ RE+R F+K G V+ H + P ++ + R VKR + +
Sbjct: 64 ALKSDRNVVFDATNVSRERRLKFLKRYGDRRVECH--ICTTPYEVALDR-VKRRKRRLD- 119
Query: 133 QGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAA 172
++ + + E P + EGF + L + Q A
Sbjct: 120 -----EKIMTKYAKNLEFPVMGEGFVDLHLVHEAGETQLA 154
>gi|315500981|ref|YP_004079868.1| metallophosphoesterase [Micromonospora sp. L5]
gi|315407600|gb|ADU05717.1| metallophosphoesterase [Micromonospora sp. L5]
Length = 838
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 34/187 (18%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTI---------NKGKSGTKVQCLTS-A 71
LV +VG GSGKSTF R P + DT ++ S L A
Sbjct: 11 LVALVGVSGSGKSTFA----RRHFAPSQVLSSDTFRGLVADDENDQSASADAFDALHHVA 66
Query: 72 SSALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHE 129
+ L++G +D NL+ R +++ E DV A+VLD+P + R+ R +
Sbjct: 67 AIRLRRGLLTVVDATNLQPHARAGLIRVAR-EHDVLPVAIVLDVPEAVAWERTEARADRT 125
Query: 130 GNLQGGKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAALDTYSGL------- 179
Q V+NRM + ++ +L+ EGF ++ + + +++ AA Y L
Sbjct: 126 HGRQ------VLNRMRRDLRQSYGRLAREGFRKVHVLRGVDEIDAAEIRYEKLFNDRREL 179
Query: 180 -GPLDTL 185
GP D +
Sbjct: 180 TGPFDVV 186
>gi|403302106|ref|XP_003941705.1| PREDICTED: poly [ADP-ribose] polymerase 14 [Saimiri boliviensis
boliviensis]
Length = 1798
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 53/125 (42%), Gaps = 19/125 (15%)
Query: 335 AAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALE 394
A QK+ + V I R L +V+ NAAN LK GG+ AA+ AAGP L+
Sbjct: 787 AGQKYFSRTDLAPGVVLIVRQGDLAQLPVDVVVNAANEDLK-HYGGLAAALSKAAGPELQ 845
Query: 395 V---ATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVK 451
+R L PGN+ I G+ HVIH +GP C + D +
Sbjct: 846 ADCDQIVKRDGKLLPGNATISK-------AGKLPYHHVIHAVGP--------CWNRDEIA 890
Query: 452 GCEIL 456
C L
Sbjct: 891 KCTYL 895
>gi|16764503|ref|NP_460118.1| hypothetical protein STM1147 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|167553071|ref|ZP_02346821.1| protein YmdB [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|167994006|ref|ZP_02575098.1| protein YmdB [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168234067|ref|ZP_02659125.1| protein YmdB [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|168467092|ref|ZP_02700934.1| protein YmdB [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|194469514|ref|ZP_03075498.1| protein YmdB [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|197265963|ref|ZP_03166037.1| protein YmdB [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|198245367|ref|YP_002215991.1| hypothetical protein SeD_A2226 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389778|ref|ZP_03216389.1| protein YmdB [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|207857345|ref|YP_002243996.1| hypothetical protein SEN1901 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213024676|ref|ZP_03339123.1| hypothetical protein Salmonelentericaenterica_20201 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
gi|213052365|ref|ZP_03345243.1| hypothetical protein Salmoneentericaenterica_05196 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213427732|ref|ZP_03360482.1| hypothetical protein SentesTyphi_20380 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213621336|ref|ZP_03374119.1| hypothetical protein SentesTyp_29012 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213648866|ref|ZP_03378919.1| hypothetical protein SentesTy_17238 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213855353|ref|ZP_03383593.1| hypothetical protein SentesT_15332 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289828609|ref|ZP_06546434.1| hypothetical protein Salmonellentericaenterica_19186 [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|374980143|ref|ZP_09721473.1| Macro domain, possibly ADP-ribose binding module [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|375119473|ref|ZP_09764640.1| Appr-1-p processing domain containing protein [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|375123944|ref|ZP_09769108.1| protein YmdB [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|378444580|ref|YP_005232212.1| hypothetical protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378449538|ref|YP_005236897.1| hypothetical protein STM14_1313 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378699040|ref|YP_005180997.1| hypothetical protein SL1344_1084 [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|378954687|ref|YP_005212174.1| hypothetical protein SPUL_0946 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|378959939|ref|YP_005217425.1| hypothetical protein STBHUCCB_18830 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|378983706|ref|YP_005246861.1| hypothetical protein STMDT12_C11650 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|378988491|ref|YP_005251655.1| hypothetical protein STMUK_1115 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379700317|ref|YP_005242045.1| Macro domain-containing protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383495870|ref|YP_005396559.1| hypothetical protein UMN798_1193 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|409994524|ref|NP_805547.2| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|418761375|ref|ZP_13317520.1| hypothetical protein SEEN185_02221 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418768299|ref|ZP_13324349.1| hypothetical protein SEEN199_20685 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418769871|ref|ZP_13325898.1| hypothetical protein SEEN539_10393 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418775889|ref|ZP_13331838.1| hypothetical protein SEEN953_11682 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418780231|ref|ZP_13336120.1| hypothetical protein SEEN188_01807 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418786409|ref|ZP_13342224.1| hypothetical protein SEEN559_12066 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418802531|ref|ZP_13358158.1| hypothetical protein SEEN202_08004 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|419788471|ref|ZP_14314158.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|419791229|ref|ZP_14316883.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|421358361|ref|ZP_15808659.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421364375|ref|ZP_15814607.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421366837|ref|ZP_15817039.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421373342|ref|ZP_15823482.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421377273|ref|ZP_15827372.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421381772|ref|ZP_15831827.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421385453|ref|ZP_15835475.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421390219|ref|ZP_15840194.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421393479|ref|ZP_15843423.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421398474|ref|ZP_15848382.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421404284|ref|ZP_15854128.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421409796|ref|ZP_15859586.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421413521|ref|ZP_15863275.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421418832|ref|ZP_15868533.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421422509|ref|ZP_15872177.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421426254|ref|ZP_15875882.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421432995|ref|ZP_15882563.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421435001|ref|ZP_15884547.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421442107|ref|ZP_15891567.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|421444399|ref|ZP_15893829.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421448294|ref|ZP_15897689.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|422030295|ref|ZP_16376502.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427631723|ref|ZP_18946300.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427654836|ref|ZP_18951057.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427660470|ref|ZP_18955964.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427666021|ref|ZP_18960735.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|436623689|ref|ZP_20514866.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|436659534|ref|ZP_20517090.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|436802571|ref|ZP_20525456.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|436809260|ref|ZP_20528640.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436814985|ref|ZP_20532536.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436844408|ref|ZP_20538166.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436854261|ref|ZP_20543895.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436857342|ref|ZP_20545862.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436864514|ref|ZP_20550481.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436873922|ref|ZP_20556646.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436877881|ref|ZP_20558736.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436888579|ref|ZP_20564908.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436895638|ref|ZP_20568394.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436901520|ref|ZP_20572430.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436912441|ref|ZP_20578270.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436922373|ref|ZP_20584598.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436926889|ref|ZP_20586715.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436936391|ref|ZP_20591831.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436943582|ref|ZP_20596528.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436950931|ref|ZP_20599986.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436961745|ref|ZP_20605119.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436970663|ref|ZP_20609056.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436982177|ref|ZP_20613673.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436994816|ref|ZP_20619084.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437001690|ref|ZP_20620969.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437020119|ref|ZP_20627270.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437033822|ref|ZP_20632706.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437045521|ref|ZP_20637819.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437053734|ref|ZP_20642533.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437058912|ref|ZP_20645759.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437070265|ref|ZP_20651443.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437076601|ref|ZP_20654964.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437081036|ref|ZP_20657488.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437091801|ref|ZP_20663401.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437111726|ref|ZP_20668312.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437122858|ref|ZP_20672662.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437127450|ref|ZP_20674772.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437138957|ref|ZP_20681439.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437145813|ref|ZP_20685720.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437156682|ref|ZP_20692218.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437159150|ref|ZP_20693664.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437166186|ref|ZP_20697971.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437178827|ref|ZP_20704945.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437183521|ref|ZP_20707814.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437230759|ref|ZP_20713375.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|437258623|ref|ZP_20716543.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437268193|ref|ZP_20721663.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437281610|ref|ZP_20728696.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437286276|ref|ZP_20730056.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437312111|ref|ZP_20736219.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437321814|ref|ZP_20738745.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437340843|ref|ZP_20744481.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437370226|ref|ZP_20749158.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437431967|ref|ZP_20756185.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437442194|ref|ZP_20757771.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437467776|ref|ZP_20764524.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437481291|ref|ZP_20768823.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437497228|ref|ZP_20773413.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437516210|ref|ZP_20778102.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437535532|ref|ZP_20781576.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437551293|ref|ZP_20783735.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437575635|ref|ZP_20790328.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437592125|ref|ZP_20795027.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437601672|ref|ZP_20797904.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437623669|ref|ZP_20805040.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437634253|ref|ZP_20806882.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437658200|ref|ZP_20811531.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437668375|ref|ZP_20815227.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437688470|ref|ZP_20819778.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437715233|ref|ZP_20827922.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437734605|ref|ZP_20832289.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|437788694|ref|ZP_20837056.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|437811918|ref|ZP_20841415.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437911930|ref|ZP_20850293.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|438041344|ref|ZP_20855746.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|438087190|ref|ZP_20859337.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438099712|ref|ZP_20863456.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438110751|ref|ZP_20868149.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|438146889|ref|ZP_20876038.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|445135244|ref|ZP_21383154.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|445142479|ref|ZP_21386165.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|445152014|ref|ZP_21390638.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|445176867|ref|ZP_21397685.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|445185410|ref|ZP_21398941.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445231471|ref|ZP_21405725.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445251841|ref|ZP_21408927.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|445337195|ref|ZP_21415919.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445353418|ref|ZP_21421159.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445363739|ref|ZP_21424662.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|54040497|sp|P67342.1|YMDB_SALTI RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|54042974|sp|P67341.1|YMDB_SALTY RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|16419662|gb|AAL20077.1| putative ACR protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|194455878|gb|EDX44717.1| protein YmdB [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|195630410|gb|EDX49036.1| protein YmdB [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197244218|gb|EDY26838.1| protein YmdB [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197939883|gb|ACH77216.1| protein YmdB [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|199602223|gb|EDZ00769.1| protein YmdB [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|205322423|gb|EDZ10262.1| protein YmdB [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205328030|gb|EDZ14794.1| protein YmdB [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205331947|gb|EDZ18711.1| protein YmdB [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|206709148|emb|CAR33481.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261246359|emb|CBG24168.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992916|gb|ACY87801.1| hypothetical protein STM14_1313 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301157688|emb|CBW17180.1| Hypothetical UPF0189 protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312912134|dbj|BAJ36108.1| hypothetical protein STMDT12_C11650 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321223763|gb|EFX48826.1| Macro domain, possibly ADP-ribose binding module [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|323129416|gb|ADX16846.1| Macro domain-containing protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|326623740|gb|EGE30085.1| Appr-1-p processing domain containing protein [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|326628194|gb|EGE34537.1| protein YmdB [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|332988038|gb|AEF07021.1| hypothetical protein STMUK_1115 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|357205298|gb|AET53344.1| hypothetical protein SPUL_0946 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|374353811|gb|AEZ45572.1| hypothetical protein STBHUCCB_18830 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|380462691|gb|AFD58094.1| Hypothetical UPF0189 protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|392617655|gb|EIX00077.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|392621200|gb|EIX03565.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|392731569|gb|EIZ88793.1| hypothetical protein SEEN199_20685 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392739317|gb|EIZ96456.1| hypothetical protein SEEN539_10393 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392740993|gb|EIZ98108.1| hypothetical protein SEEN185_02221 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392746522|gb|EJA03528.1| hypothetical protein SEEN953_11682 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392748079|gb|EJA05069.1| hypothetical protein SEEN559_12066 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392749281|gb|EJA06258.1| hypothetical protein SEEN188_01807 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392777544|gb|EJA34227.1| hypothetical protein SEEN202_08004 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|395983864|gb|EJH93054.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|395988665|gb|EJH97821.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395989492|gb|EJH98626.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|395996461|gb|EJI05506.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|396000895|gb|EJI09909.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|396001735|gb|EJI10747.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396014029|gb|EJI22915.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396016890|gb|EJI25757.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396017362|gb|EJI26227.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396025093|gb|EJI33877.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396027364|gb|EJI36128.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396031547|gb|EJI40274.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396038110|gb|EJI46754.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396040609|gb|EJI49233.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396041824|gb|EJI50447.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396049211|gb|EJI57754.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396053761|gb|EJI62254.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396059382|gb|EJI67837.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396062784|gb|EJI71195.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|396066830|gb|EJI75190.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396073894|gb|EJI82194.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|414022582|gb|EKT06058.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414049308|gb|EKT31524.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414050865|gb|EKT33021.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414055327|gb|EKT37238.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414060727|gb|EKT42226.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|434938553|gb|ELL45506.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|434957195|gb|ELL50856.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434963396|gb|ELL56506.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|434967077|gb|ELL59912.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434973101|gb|ELL65489.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434978994|gb|ELL70986.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434983064|gb|ELL74872.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434989494|gb|ELL81044.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434995549|gb|ELL86865.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|434998679|gb|ELL89900.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|435007818|gb|ELL98645.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435010289|gb|ELM01075.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435015527|gb|ELM06053.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435020582|gb|ELM10976.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|435020954|gb|ELM11343.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435024691|gb|ELM14897.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435026686|gb|ELM16817.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435036730|gb|ELM26549.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435039229|gb|ELM29010.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435043781|gb|ELM33498.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435050884|gb|ELM40388.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435051398|gb|ELM40900.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435056952|gb|ELM46321.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435064047|gb|ELM53194.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435066431|gb|ELM55519.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435074561|gb|ELM63385.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435076712|gb|ELM65494.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435079756|gb|ELM68451.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435079809|gb|ELM68503.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435088748|gb|ELM77203.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435090236|gb|ELM78638.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435094725|gb|ELM83064.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435105898|gb|ELM93935.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435111655|gb|ELM99543.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435112707|gb|ELN00572.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435117947|gb|ELN05636.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435122914|gb|ELN10420.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435129554|gb|ELN16845.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435132479|gb|ELN19677.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435135289|gb|ELN22398.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435137274|gb|ELN24345.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435150083|gb|ELN36767.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435152244|gb|ELN38874.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435153543|gb|ELN40151.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435162569|gb|ELN48742.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435165870|gb|ELN51872.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435168848|gb|ELN54659.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435174372|gb|ELN59814.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435183243|gb|ELN68218.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435184803|gb|ELN69724.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435194436|gb|ELN78885.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435196136|gb|ELN80481.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435197721|gb|ELN81989.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|435198511|gb|ELN82685.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435206778|gb|ELN90276.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435211670|gb|ELN94758.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435215623|gb|ELN98225.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435217706|gb|ELO00121.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435225567|gb|ELO07258.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435229051|gb|ELO10446.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435240491|gb|ELO20886.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435244684|gb|ELO24859.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435246115|gb|ELO26134.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435253482|gb|ELO32956.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435255080|gb|ELO34458.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435260684|gb|ELO39874.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435270895|gb|ELO49380.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435281665|gb|ELO59327.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435282584|gb|ELO60198.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435283320|gb|ELO60896.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435285142|gb|ELO62545.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435286496|gb|ELO63751.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|435295462|gb|ELO71920.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435297749|gb|ELO74016.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435317179|gb|ELO90231.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|435318398|gb|ELO91339.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435322243|gb|ELO94554.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|435325310|gb|ELO97175.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435331958|gb|ELP03056.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|444845892|gb|ELX71075.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444849904|gb|ELX75013.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|444854796|gb|ELX79853.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|444856506|gb|ELX81535.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444863365|gb|ELX88191.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444870105|gb|ELX94645.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444872958|gb|ELX97266.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444873678|gb|ELX97969.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444883450|gb|ELY07329.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|444889602|gb|ELY13023.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
Length = 179
Score = 45.1 bits (105), Expect = 0.10, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDIT+L + I NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 10 GDITQL------SVDAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKLIRQQQGECQT 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI P G+ VIH +GP
Sbjct: 63 GHAVITP-------AGKLSAKAVIHTVGP 84
>gi|343470588|emb|CCD16756.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 318
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 10/107 (9%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q +++ VG P GK+TF E ++ P + +N+ K TK +C++ A+ + +GK
Sbjct: 153 QEMILFVGYPSCGKTTFFERFLK----PHGYV---HVNRDKLQTKERCISEATKSWNEGK 205
Query: 80 SVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRI 126
SV +D N + F+K+ G + LP +L + ++ K +
Sbjct: 206 SVVVDNTNPSHDDCKSFLKIIGLKCSSKGT---LPVRLFLFKASKEL 249
>gi|168822583|ref|ZP_02834583.1| protein YmdB [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205341022|gb|EDZ27786.1| protein YmdB [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
Length = 179
Score = 45.1 bits (105), Expect = 0.10, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDIT+L + I NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 10 GDITQL------SVDAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKLIRQQQGECQT 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI P G+ VIH +GP
Sbjct: 63 GHAVITP-------AGKLSAKAVIHTVGP 84
>gi|411003101|ref|ZP_11379430.1| serine/threonine protein phosphatase [Streptomyces globisporus
C-1027]
Length = 861
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKSTF + + + +C+ D ++ S L A L
Sbjct: 29 LVVLIGASGSGKSTFARKHFKPTEIVSSDVCRGLVADDENDQSASRDAFDVLHYIAGKRL 88
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKR 125
+ G+ +D +++ E R V+L + DV A+VLDLP ++C +R+ R
Sbjct: 89 EAGRLTVIDATSVQSESRKQLVQLAR-KYDVLPIAIVLDLPEEVCAARNAAR 139
>gi|355559393|gb|EHH16121.1| hypothetical protein EGK_11361 [Macaca mulatta]
Length = 1748
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 46/103 (44%), Gaps = 24/103 (23%)
Query: 361 LCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV---ATAERAKSLYPGNSVIVPLPST 417
L +V+ NA+N LK GG+ AA+ AAGP L+ +R L PGN++I
Sbjct: 762 LPVDVVVNASNEDLK-HYGGLAAALSKAAGPELQADCDQIVKREGRLLPGNAIISK---- 816
Query: 418 SPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAY 460
G+ HVIH +GP N GCE R Y
Sbjct: 817 ---AGKLPYHHVIHAVGPRWN-------------GCEAPRCVY 843
>gi|67484554|ref|XP_657497.1| polynucleotide kinase-3'-phosphatase [Entamoeba histolytica
HM-1:IMSS]
gi|56474750|gb|EAL52107.1| polynucleotide kinase-3'-phosphatase, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449702136|gb|EMD42830.1| polynucleotide kinase/phosphatase, putative [Entamoeba histolytica
KU27]
Length = 388
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 22/145 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+++ VG+P SGK++F E ++ W IN G K +C+ A L + +S
Sbjct: 235 IILFVGSPASGKTSFYEKYLKPKGYGW-------INMDTLGNKTKCMREAKK-LIENESF 286
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGN----LQGGK- 136
+D N E R +F++L D+P + K++ + N L K
Sbjct: 287 VIDNSNPTIEGRQEFIELAKKN--------DIPIRCFYFECDKKLTNHLNTFRALTTNKN 338
Query: 137 -AAAVVNRMLQKKELPKLSEGFSRI 160
A +N +K P+ EGF+ I
Sbjct: 339 IPAIAINVYYKKFVQPRKEEGFTEI 363
>gi|213419242|ref|ZP_03352308.1| hypothetical protein Salmonentericaenterica_16044 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 174
Score = 45.1 bits (105), Expect = 0.11, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDIT+L + I NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 5 GDITQL------SVDAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKLIRQQQGECQT 57
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI P G+ VIH +GP
Sbjct: 58 GHAVITP-------AGKLSAKAVIHTVGP 79
>gi|16760024|ref|NP_455641.1| hypothetical protein STY1184 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16502318|emb|CAD08271.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137835|gb|AAO69396.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 186
Score = 45.1 bits (105), Expect = 0.11, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDIT+L + I NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 17 GDITQL------SVDAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKLIRQQQGECQT 69
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI P G+ VIH +GP
Sbjct: 70 GHAVITP-------AGKLSAKAVIHTVGP 91
>gi|238894096|ref|YP_002918830.1| hypothetical protein KP1_2047 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|238546412|dbj|BAH62763.1| hypothetical protein KP1_2047 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 181
Score = 45.1 bits (105), Expect = 0.11, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 46/90 (51%), Gaps = 17/90 (18%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLY 405
+GDIT L +VI NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 15 LGDITTLDV------DVIVNAANPSLL-GGGGVDGAIHRAAGPALLAACKQVLQQQGECP 67
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PG++VI + G + VIH +GP
Sbjct: 68 PGHAVIT-------IAGNLPASAVIHTVGP 90
>gi|355746472|gb|EHH51086.1| hypothetical protein EGM_10412 [Macaca fascicularis]
Length = 1744
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 46/103 (44%), Gaps = 24/103 (23%)
Query: 361 LCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV---ATAERAKSLYPGNSVIVPLPST 417
L +V+ NA+N LK GG+ AA+ AAGP L+ +R L PGN++I
Sbjct: 758 LPVDVVVNASNEDLK-HYGGLAAALSKAAGPELQADCDQIVKREGRLLPGNAIISK---- 812
Query: 418 SPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAY 460
G+ HVIH +GP N GCE R Y
Sbjct: 813 ---AGKLPYHHVIHAVGPRWN-------------GCEAPRCVY 839
>gi|108803504|ref|YP_643441.1| Appr-1-p processing [Rubrobacter xylanophilus DSM 9941]
gi|108764747|gb|ABG03629.1| Appr-1-p processing [Rubrobacter xylanophilus DSM 9941]
Length = 179
Score = 45.1 bits (105), Expect = 0.11, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 40/83 (48%), Gaps = 21/83 (25%)
Query: 366 IANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSL---YPGNSVIV---PLPSTSP 419
+ NAAN L PGGG V AI AAGP L AE + L PG +VI LP+
Sbjct: 26 VVNAANAELMPGGG-VAGAIHRAAGPGL----AEECRPLAPIRPGQAVITGGHRLPN--- 77
Query: 420 LCGREGVTHVIHVLGPNMNPRRP 442
HVIHVLGP RP
Sbjct: 78 -------RHVIHVLGPVYGQDRP 93
>gi|329940126|ref|ZP_08289408.1| calcineurin-like phosphoesterase [Streptomyces griseoaurantiacus
M045]
gi|329300952|gb|EGG44848.1| calcineurin-like phosphoesterase [Streptomyces griseoaurantiacus
M045]
Length = 851
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 23/182 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTIN---KGKSGTK--VQCLTS-ASSAL 75
LV++VGA GSGKSTF R + + C+ ++ +S T+ L A L
Sbjct: 18 LVVLVGASGSGKSTFARRHFRPTEVISSDFCRGLVSDDENDQSATRDAFDVLHYIAGKRL 77
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
G+ +D +++ + R + L +V AVVLD+P ++C +R+ R + +
Sbjct: 78 AAGRRTVVDATSVQSDARRALIDLARAHDVLPIAVVLDVPEEVCAARNAARTD-----RA 132
Query: 135 GKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAA-------LDTYSGL-GPLD 183
V+ R ++ ++ L +L EGF ++ + + +++ A + +GL GP D
Sbjct: 133 DMPRRVIARHIRELRRSLRQLEREGFRKVHVLRGVEEIENATVVTERRYNDLTGLTGPFD 192
Query: 184 TL 185
+
Sbjct: 193 II 194
>gi|226312363|ref|YP_002772257.1| hypothetical protein BBR47_27760 [Brevibacillus brevis NBRC 100599]
gi|226095311|dbj|BAH43753.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 320
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMR-------SSARPWARICQDTINKGKSG-TKVQCLTS 70
K+ L+++ G GSGKS + + + + S+ + D + KS + +
Sbjct: 2 KKKLIVLSGIAGSGKSKWAQEIAKKERAIIVSTDEIRQNLFGDERKQKKSAQVFFEVYSK 61
Query: 71 ASSALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEG 130
++ L G++V LD N++RE+R V P+V +D+P +C+ R+ R
Sbjct: 62 IATELANGRNVILDATNIDREKRMK-VLAKFPDVQKECYYVDVPYSVCLERNKSR----- 115
Query: 131 NLQGGKAAAVVNRMLQKKELPKLSEGFSRI-----------------TLCQNENDVQAAL 173
+ ++ +M + P +EG+ I L QNE +
Sbjct: 116 --KRTVDEYILAKMRKNFHFPIKNEGWDHIHLLHEPVPYDIEKEEFVQLLQNEPSYEELF 173
Query: 174 DTYSGLGPLDTLPHGSFGQKNP 195
D + + + F Q+NP
Sbjct: 174 DRLNAIPIFKEM--YQFNQENP 193
>gi|56413865|ref|YP_150940.1| hypothetical protein SPA1704 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362788|ref|YP_002142425.1| hypothetical protein SSPA1585 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56128122|gb|AAV77628.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197094265|emb|CAR59771.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 179
Score = 45.1 bits (105), Expect = 0.11, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDIT+L + I NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 10 GDITQL------SVDAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKLIRQQQGECQT 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI P G+ VIH +GP
Sbjct: 63 GHAVITP-------AGKLSAKAVIHTVGP 84
>gi|422025290|ref|ZP_16371727.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|427606539|ref|ZP_18941353.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|427749822|ref|ZP_18965819.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|414021038|gb|EKT04602.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|414039728|gb|EKT22390.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|414066338|gb|EKT46917.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
Length = 183
Score = 45.1 bits (105), Expect = 0.11, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDIT+L + I NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 14 GDITQL------SVDAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKLIRQQQGECQT 66
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI P G+ VIH +GP
Sbjct: 67 GHAVITP-------AGKLSAKAVIHTVGP 88
>gi|261408059|ref|YP_003244300.1| Appr-1-p processing domain-containing protein [Paenibacillus sp.
Y412MC10]
gi|261284522|gb|ACX66493.1| Appr-1-p processing domain protein [Paenibacillus sp. Y412MC10]
Length = 191
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 46/92 (50%), Gaps = 17/92 (18%)
Query: 347 TFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAK---S 403
F+GDIT +TG ++I NAAN L GG GV+ AI SA GP + E K
Sbjct: 13 VFIGDITT-WTG-----DIIVNAANSGLL-GGKGVDGAIHSAGGPEIMEQCMEIRKQQGG 65
Query: 404 LYPGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PGN+VI GR H+IH +GP
Sbjct: 66 CPPGNAVITG-------AGRLPAQHIIHTVGP 90
>gi|225182139|ref|ZP_03735564.1| conserved hypothetical protein [Dethiobacter alkaliphilus AHT 1]
gi|225167168|gb|EEG75994.1| conserved hypothetical protein [Dethiobacter alkaliphilus AHT 1]
Length = 157
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 16/148 (10%)
Query: 24 IMVGAPGSGKSTFCEHVMRSSARPWARICQDTI---------NKGKSGTKVQCLTSAS-S 73
+ +G P SGKS++ + ++R + + ++ + D I N + Q + +
Sbjct: 7 LFIGIPASGKSSWAQKLLRENPKKFSYLSSDEIRESVFGDVANMSHNALVFQIMKDRMIT 66
Query: 74 ALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQ 133
AL+ +SV LD ++ +R F++L ++ A V+ K + +++R E N +
Sbjct: 67 ALENERSVILDATFVKASERQPFIQLAK---ELEAQVMAYYIKTDLGEALQRNE---NRK 120
Query: 134 GGKAAAVVNRMLQKKELPKLSEGFSRIT 161
A V+ + L+ E P +EGF RI
Sbjct: 121 RRVPAEVIRQRLKDVEEPAPAEGFDRIV 148
>gi|427548715|ref|ZP_18927039.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|414020962|gb|EKT04528.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
Length = 185
Score = 45.1 bits (105), Expect = 0.12, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDIT+L + I NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 16 GDITQL------SVDAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKLIRQQQGECQT 68
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI P G+ VIH +GP
Sbjct: 69 GHAVITP-------AGKLSAKAVIHTVGP 90
>gi|383847364|ref|XP_003699324.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase-like
[Megachile rotundata]
Length = 554
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 25/150 (16%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q +++MVG PGSGKS F ++ + + +N+ G+ +C+ L + +
Sbjct: 398 QEVILMVGCPGSGKSHFVKNHLNH---------YECVNRDSLGSWQKCIKMMEKHLMEKR 448
Query: 80 SVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQ----- 133
SV +D N + R ++++ V V ++ + SV +H +
Sbjct: 449 SVVVDNTNPDCASRQRYIEVAKRYNVSVRCFIMSI--------SVDHAKHNNKFRELTDP 500
Query: 134 --GGKAAAVVNRMLQKKELPKLSEGFSRIT 161
+ ++N + +LP L EGF+ I
Sbjct: 501 SHAKISEIIINSYMNNYQLPTLDEGFAEIV 530
>gi|424934072|ref|ZP_18352444.1| Hypothetical protein B819_145214 [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|407808259|gb|EKF79510.1| Hypothetical protein B819_145214 [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
Length = 181
Score = 45.1 bits (105), Expect = 0.12, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 46/90 (51%), Gaps = 17/90 (18%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLY 405
+GDIT L +VI NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 15 LGDITTLDV------DVIVNAANPSLL-GGGGVDGAIHRAAGPALLAACKQVLQQQGECP 67
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PG++VI + G + VIH +GP
Sbjct: 68 PGHAVIT-------IAGNLPASAVIHTVGP 90
>gi|329925955|ref|ZP_08280648.1| macro domain protein [Paenibacillus sp. HGF5]
gi|328939523|gb|EGG35873.1| macro domain protein [Paenibacillus sp. HGF5]
Length = 174
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 46/92 (50%), Gaps = 17/92 (18%)
Query: 347 TFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAK---S 403
F+GDIT +TG ++I NAAN L GG GV+ AI SA GP + E K
Sbjct: 13 VFIGDITT-WTG-----DIIVNAANSGLL-GGKGVDGAIHSAGGPEIMEQCMEIRKQQGG 65
Query: 404 LYPGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PGN+VI GR H+IH +GP
Sbjct: 66 CPPGNAVITG-------AGRLPAQHIIHTVGP 90
>gi|302864688|ref|YP_003833325.1| Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) [Micromonospora
aurantiaca ATCC 27029]
gi|302567547|gb|ADL43749.1| Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) [Micromonospora
aurantiaca ATCC 27029]
Length = 838
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 26/183 (14%)
Query: 22 LVIMVGAPGSGKSTFCEH-----VMRSSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV +VG GSGKSTF + SS + D ++ S L A+ L
Sbjct: 11 LVALVGVSGSGKSTFARRHFAPSQVLSSDTFRGLVADDENDQSASADAFDALHHVAAIRL 70
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
++G +D NL+ R +++ E DV A+VLD+P + R+ R + Q
Sbjct: 71 RRGLLTVVDATNLQPHARAGLIRVAR-EHDVLPVAIVLDVPEAVAWERTEARADRTHGRQ 129
Query: 134 GGKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAALDTYSGL--------GPL 182
V+NRM + ++ +L+ EGF ++ + + +++ AA Y L GP
Sbjct: 130 ------VLNRMRRDLRQSYGRLAREGFRKVHVLRGVDEIDAAEVRYEKLFNDRRELTGPF 183
Query: 183 DTL 185
D +
Sbjct: 184 DVV 186
>gi|271968008|ref|YP_003342204.1| bis(5'-nucleosyl)-tetraphosphatase [Streptosporangium roseum DSM
43021]
gi|270511183|gb|ACZ89461.1| bis(5'-nucleosyl)-tetraphosphatase(symmetrical) [Streptosporangium
roseum DSM 43021]
Length = 847
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 16/161 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV++VG GSGKSTF + + C+ D ++ + L + L
Sbjct: 11 LVVLVGVSGSGKSTFARKHFAPTQVVSSDFCRGLVADDENDQTATPDAFDVLDYIVGTRL 70
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
++G +D N++ E R ++L V V A+V+D+P ++ I R+ R + +
Sbjct: 71 RRGLLTVVDATNVQWEARKKLIELAKSHNVLVDAIVMDVPEEVAIERNEARPDRDFGPH- 129
Query: 135 GKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAA 172
V+ R + ++ + K+S +GF R+ + + ++++AA
Sbjct: 130 -----VIRRQRKDLRRSMAKISRDGFRRVHVLRGTDEIEAA 165
>gi|444705731|gb|ELW47122.1| Bifunctional polynucleotide phosphatase/kinase [Tupaia chinensis]
Length = 520
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 25/148 (16%)
Query: 22 LVIMVGAPGSGKSTFC-EHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKS 80
+VI VG PG+GKSTF EH++ + + + +DT+ G+ +C++ +ALK+GK
Sbjct: 366 VVIAVGFPGAGKSTFLREHLVSAG---YVHVNRDTL-----GSWQRCVSLCETALKQGKR 417
Query: 81 VFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAK-LCISRSVKRIEHEGNLQGGKAAA 139
V +D N + R +++ A P + + ++++ H + ++
Sbjct: 418 VVVDNTNPDAASRARYIQC--------ARAAGAPCRCFLFTTTLEQARHNNRFREMTCSS 469
Query: 140 -------VVNRMLQKKELPKLSEGFSRI 160
V+ ++ E P L+EGFS I
Sbjct: 470 HVPVSDVVMFGYRKQYEAPTLAEGFSAI 497
>gi|441630582|ref|XP_004093126.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional polynucleotide
phosphatase/kinase, partial [Nomascus leucogenys]
Length = 535
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+T+ +ALK+GK V
Sbjct: 442 VVVAVGFPGAGKSTFLKKHLVSAG--YVHVNRDTL-----GSWQRCVTACETALKQGKRV 494
Query: 82 FLDRCNLEREQRTDFVK 98
+D N + R + +
Sbjct: 495 AIDNTNPDAASRARYFQ 511
>gi|444909946|ref|ZP_21230134.1| protein serine-threonine phosphatase [Cystobacter fuscus DSM 2262]
gi|444719544|gb|ELW60336.1| protein serine-threonine phosphatase [Cystobacter fuscus DSM 2262]
Length = 853
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 18/157 (11%)
Query: 22 LVIMVGAPGSGKSTFCE------HVMRSSARPWARICQDTINKGKSGTKVQCLT-SASSA 74
LV+++G GSGKS+F V+ S A + D +N+ + + L A+
Sbjct: 10 LVVLIGPSGSGKSSFARKHFLPTEVLSSDAYR-GLVSDDELNQDSTADAFEALRFVAAKR 68
Query: 75 LKKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQ 133
L +G+ +D N++ E R V+L V AVVLD+P K+C R+ R+ + N+
Sbjct: 69 LARGRLTVIDATNVQPESRKFLVELAREYHVLPVAVVLDVPEKICHERN--RLRPDRNM- 125
Query: 134 GGKAAAVVNRMLQK--KELPKLS-EGFSRITLCQNEN 167
+ VV LQ+ + + L EGF + + + E
Sbjct: 126 ---GSHVVRTQLQQLHRSIRGLEREGFRHVHVLEPER 159
>gi|227514077|ref|ZP_03944126.1| Appr-1-p processing domain protein [Lactobacillus fermentum ATCC
14931]
gi|227087558|gb|EEI22870.1| Appr-1-p processing domain protein [Lactobacillus fermentum ATCC
14931]
Length = 169
Score = 45.1 bits (105), Expect = 0.13, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 45/89 (50%), Gaps = 21/89 (23%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT+L + I NAAN L+ GGGGV+ AI AAGP L+VA A + G +
Sbjct: 9 GDITKLKV------DAIVNAANTTLR-GGGGVDGAIHRAAGPGLDVACA-KFGGCPTGEA 60
Query: 410 VIVP---LPSTSPLCGREGVTHVIHVLGP 435
I P LP+ T +IH GP
Sbjct: 61 RITPGFNLPA----------TFIIHTPGP 79
>gi|347449482|gb|AEO93523.1| gp264 [Bacillus phage G]
Length = 425
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 73/177 (41%), Gaps = 32/177 (18%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDT----INKGKSGTK----------- 64
Q +++M+G PGSGKST + ++ + IC DT I+K K G +
Sbjct: 14 QKIIVMMGIPGSGKSTLAKEFEKNGFKI---ICPDTYRGIISKTKPGREHWTDAMHEGDQ 70
Query: 65 -------VQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKL 117
A ALK+ KS+ D + + R G +VD + V + +
Sbjct: 71 RVSKEAWEMAFKEAKEALKEKKSIVFDAMSQTPKARRRLFSQLGTKVDYYGVYNVVELET 130
Query: 118 CISRSVKRIEHEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALD 174
I R+ KR + ++ +++ +P L EGF + + N+ ++ ++
Sbjct: 131 AIDRNSKRDRKVPDF-------IIEEKWREQSIPTLEEGFKEVIVFHNDLEINTNIN 180
>gi|333025445|ref|ZP_08453509.1| putative appr-1-p processing domain-containing protein
[Streptomyces sp. Tu6071]
gi|332745297|gb|EGJ75738.1| putative appr-1-p processing domain-containing protein
[Streptomyces sp. Tu6071]
Length = 174
Score = 45.1 bits (105), Expect = 0.13, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 44/86 (51%), Gaps = 13/86 (15%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GD+TR + + NAAN L+ GGGGV+ A+ AAGP L A + A PG++
Sbjct: 14 GDLTRQDV------DALVNAANSSLQ-GGGGVDGALHRAAGPELARAGRDLAPC-RPGDA 65
Query: 410 VIVPLPSTSPLCGREGVTHVIHVLGP 435
P SP V HVIH +GP
Sbjct: 66 KATPAFRLSP-----PVRHVIHTVGP 86
>gi|342181397|emb|CCC90876.1| putative polynucleotide kinase 3'-phosphatase [Trypanosoma
congolense IL3000]
Length = 477
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q +++ VG P GK+TF E ++ +N+ K TK +C++ A+ + +GK
Sbjct: 312 QEMILFVGYPSCGKTTFFERFLKPHG-------YVHVNRDKLQTKERCISEATKSWNEGK 364
Query: 80 SVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRI 126
SV +D N + F+K+ G + LP +L + ++ K +
Sbjct: 365 SVVVDNTNPSHDDCKSFLKIIGLKCSSKGT---LPVRLFLFKASKEL 408
>gi|443728269|gb|ELU14683.1| hypothetical protein CAPTEDRAFT_176929 [Capitella teleta]
Length = 547
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 49/82 (59%), Gaps = 9/82 (10%)
Query: 20 QILVIMVGAPGSGKSTFC-EHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
Q +++MVG+P SGKS F +H++ ++ + + +D++ T +C+++ AL +G
Sbjct: 389 QEVIVMVGSPASGKSHFAMKHLI---SKGYVHVNRDSLK-----TWQKCVSTTRDALSRG 440
Query: 79 KSVFLDRCNLEREQRTDFVKLG 100
KSV +D N + E R ++++
Sbjct: 441 KSVVVDNTNPDTESRARYLEVA 462
>gi|238062047|ref|ZP_04606756.1| serine/threonine protein phosphatase [Micromonospora sp. ATCC
39149]
gi|237883858|gb|EEP72686.1| serine/threonine protein phosphatase [Micromonospora sp. ATCC
39149]
Length = 840
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 22/181 (12%)
Query: 22 LVIMVGAPGSGKSTFCE------HVMRSSARPWARICQDTINKGKSGTKVQCLTS-ASSA 74
LV +VG GSGKSTF V+ S A + D ++ S L A
Sbjct: 9 LVALVGVSGSGKSTFARRHFAPSQVLSSDAFR-GMVADDENDQSASADAFDALHHVAGIR 67
Query: 75 LKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNL 132
L++G +D NL+ R V++ E DV A+VLD+P + R+ R +
Sbjct: 68 LRRGLLTVVDATNLQPHARAGLVRVAR-EHDVLPVAIVLDVPEAVAWERTQGRAD---RT 123
Query: 133 QGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGL--------GPLDT 184
G + A + R L++ EGF ++ + + +++ AA Y L GP D
Sbjct: 124 HGRQVLARMQRDLRQSYGRLAREGFRKVHVLRGVDEIDAAEIRYEKLLNDRRELTGPFDI 183
Query: 185 L 185
+
Sbjct: 184 V 184
>gi|386394527|ref|ZP_10079308.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Desulfovibrio sp. U5L]
gi|385735405|gb|EIG55603.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Desulfovibrio sp. U5L]
Length = 184
Score = 44.7 bits (104), Expect = 0.14, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 51/119 (42%), Gaps = 31/119 (26%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE---RAKSLYPGNSVIVP---LPST 417
+ I NAAN L GGGGV+ AI AAGP L A E R L G +VI P LP+
Sbjct: 27 DAIVNAANSALA-GGGGVDGAIQRAAGPRLLAACREIIDRIGRLPAGGAVITPGFDLPA- 84
Query: 418 SPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEK 476
HVIH +GP G E LR AY S+ R+ EK
Sbjct: 85 ---------RHVIHTVGP--------IWRGGASGEAEALRSAYAE------SLARAAEK 120
>gi|302541968|ref|ZP_07294310.1| putative protein serine-threonine phosphatase [Streptomyces
hygroscopicus ATCC 53653]
gi|302459586|gb|EFL22679.1| putative protein serine-threonine phosphatase [Streptomyces
himastatinicus ATCC 53653]
Length = 863
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 21/164 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV++VG GSGKSTF H + + +C+ D ++ + + L A L
Sbjct: 15 LVVLVGTTGSGKSTFARHHFLPTQIVSSDVCRGLVSDDENDQSATPDAFELLHYIAGKRL 74
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D N++ E R ++L E DV A+VLD+P C R+ R + +
Sbjct: 75 AAGRLTVVDATNVQPEARRSLIQL-AREHDVLPVAIVLDVPEGECARRNGARPD-----R 128
Query: 134 GGKAAAVVNRMLQKKELPKL-----SEGFSRITLCQNENDVQAA 172
+ V++R Q++EL + EGF ++ + + V+ A
Sbjct: 129 ADMPSHVISR--QRRELRRSLKSLEREGFRKVHILRGVEQVEGA 170
>gi|302520826|ref|ZP_07273168.1| appr-1-p processing domain-containing protein [Streptomyces sp.
SPB78]
gi|318062360|ref|ZP_07981081.1| Appr-1-p processing domain-containing protein [Streptomyces sp.
SA3_actG]
gi|318078360|ref|ZP_07985692.1| Appr-1-p processing domain-containing protein [Streptomyces sp.
SA3_actF]
gi|302429721|gb|EFL01537.1| appr-1-p processing domain-containing protein [Streptomyces sp.
SPB78]
Length = 174
Score = 44.7 bits (104), Expect = 0.14, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 44/86 (51%), Gaps = 13/86 (15%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GD+TR + + NAAN L+ GGGGV+ A+ AAGP L A + A PG++
Sbjct: 14 GDLTRQDV------DALVNAANSSLQ-GGGGVDGALHRAAGPELARAGRDLAPC-RPGDA 65
Query: 410 VIVPLPSTSPLCGREGVTHVIHVLGP 435
P SP V HVIH +GP
Sbjct: 66 KATPAFRLSP-----PVRHVIHTVGP 86
>gi|374985975|ref|YP_004961470.1| putative serine/threonine protein phosphatase [Streptomyces
bingchenggensis BCW-1]
gi|297156627|gb|ADI06339.1| putative serine/threonine protein phosphatase [Streptomyces
bingchenggensis BCW-1]
Length = 902
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 21/164 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++G GSGKSTF + + +C+ D ++ + L A L
Sbjct: 15 LVVLIGTTGSGKSTFARRHFLPTQIVSSDVCRGLVADDENDQSATPDAFDLLHYIAGKRL 74
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D N++ + R ++L E DV A+VLD+P +C+ R+ +R + +
Sbjct: 75 AAGRLTVVDATNVQPQARRSLIELAR-EHDVLPVAIVLDVPESVCVRRNAERPD-----R 128
Query: 134 GGKAAAVVNRMLQKKELPKL-----SEGFSRITLCQNENDVQAA 172
A V+ R Q++EL + EGF ++ + + E + + A
Sbjct: 129 VDLPAHVIPR--QRRELRRSLKSLEREGFRKVHILRGEEEAETA 170
>gi|20178229|sp|Q9HJ67.2|Y1105_THEAC RecName: Full=Uncharacterized protein Ta1105
Length = 196
Score = 44.7 bits (104), Expect = 0.14, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGN 408
VGDIT I NAAN L GGGGV+ AI SAAGP L + + YP
Sbjct: 15 VGDITESDA------EAIVNAANSSLM-GGGGVDGAIHSAAGPELNGELVKIRRERYPNG 67
Query: 409 SVIVPLPSTSPLCGREGVTHVIHVLGP 435
+ P + R +H+IH +GP
Sbjct: 68 --LPPGEAVITRGYRLKASHIIHTVGP 92
>gi|283833660|ref|ZP_06353401.1| RNase III regulator YmdB [Citrobacter youngae ATCC 29220]
gi|291071345|gb|EFE09454.1| RNase III regulator YmdB [Citrobacter youngae ATCC 29220]
Length = 180
Score = 44.7 bits (104), Expect = 0.14, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDIT + +VI NAAN L GGGGV+ AI AAGPAL A ++ P
Sbjct: 10 GDITTI------AVDVIVNAANPSLL-GGGGVDGAIHRAAGPALLAACKQVIQQQGECPP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI L G VIH +GP
Sbjct: 63 GHAVIT-------LAGALPAKAVIHTVGP 84
>gi|340721949|ref|XP_003399375.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase-like
[Bombus terrestris]
Length = 567
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 66/150 (44%), Gaps = 25/150 (16%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q +++MVG PGSGKS H R+ + + + +DT+ G+ +C+T + +
Sbjct: 411 QEIILMVGCPGSGKS----HFARNYLKHYGYVNRDTL-----GSWQKCITIMEKHINEKD 461
Query: 80 SVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAK-LCISRSVKRIEHEGNLQGGKAA 138
SV +D N + R ++++ A ++P + + S+ +H +
Sbjct: 462 SVVIDNTNPDCVSRQRYIEI--------AKKYNIPVRCFVMLTSIDHAKHNNKFRELTDP 513
Query: 139 A-------VVNRMLQKKELPKLSEGFSRIT 161
++N ++ + P L EGF+ I
Sbjct: 514 THVKVNDLIINSYVKSYQQPSLEEGFTEIV 543
>gi|358459421|ref|ZP_09169619.1| Appr-1-p processing domain protein [Frankia sp. CN3]
gi|357077225|gb|EHI86686.1| Appr-1-p processing domain protein [Frankia sp. CN3]
Length = 185
Score = 44.7 bits (104), Expect = 0.15, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 54/115 (46%), Gaps = 18/115 (15%)
Query: 347 TFV-GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLY 405
TFV GDIT+ + I NAAN L GGGGV+ AI A GP + A ++ Y
Sbjct: 9 TFVHGDITQQQV------DAIVNAANSSLL-GGGGVDGAIHWAGGPEILAACRRLRETEY 61
Query: 406 PGNSVIVPLP---STSPLCGREGVTHVIHVLGPNMNPR--RPNCLDGDYVKGCEI 455
P LP + + G+ HVIHV+GP + R R L YV+ +
Sbjct: 62 PKG-----LPAGGAVATTAGQLPARHVIHVVGPVYSTRADRSTLLRSCYVEAIRV 111
>gi|367028763|ref|XP_003663665.1| hypothetical protein MYCTH_2093327 [Myceliophthora thermophila ATCC
42464]
gi|347010935|gb|AEO58420.1| hypothetical protein MYCTH_2093327 [Myceliophthora thermophila ATCC
42464]
Length = 478
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF ++ + R+ QD + + +C +A+ L++G SV
Sbjct: 310 IVLFVGPPGAGKSTFYWKYLKPLG--YERVNQDILKRHD-----KCFKAAAEFLQEGDSV 362
Query: 82 FL-----------DRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLC-ISRSVKRIEH 128
+ D N + + R+ ++ L V + P +LC + +V+ +
Sbjct: 363 VVVLHSSADLLRADNTNPDVDTRSQWIALARKHGVPIRCFWFRTPLQLCEHNATVRSMNK 422
Query: 129 EGNLQGGKAAAVV--NRMLQKKELPKLSEGFSRI 160
+ N + +A + N + + PK+ EGF I
Sbjct: 423 KLNPESRQALPRIAFNGFTSRFKEPKIEEGFQDI 456
>gi|87306710|ref|ZP_01088857.1| hypothetical protein DSM3645_10262 [Blastopirellula marina DSM
3645]
gi|87290889|gb|EAQ82776.1| hypothetical protein DSM3645_10262 [Blastopirellula marina DSM
3645]
Length = 191
Score = 44.7 bits (104), Expect = 0.15, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 13/87 (14%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGN 408
+GDIT +++ NAAN RL GGGGV+ AI +A GPA+ T R P
Sbjct: 14 IGDITDQNV------DIVVNAANSRLA-GGGGVDGAIHAAGGPAIMEETRRRYPDGCPTG 66
Query: 409 SVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ S L R +VIH +GP
Sbjct: 67 EAVI--SSAGKLSAR----YVIHAVGP 87
>gi|365969935|ref|YP_004951496.1| protein YmdB [Enterobacter cloacae EcWSU1]
gi|365748848|gb|AEW73075.1| UPF0189 protein ymdB [Enterobacter cloacae EcWSU1]
Length = 180
Score = 44.7 bits (104), Expect = 0.15, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 45/89 (50%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPA-LEVATAERAKS--LYP 406
GDIT ++ +VI NAAN L GGGGV+ AI AAGP LE A R + P
Sbjct: 10 GDITTMHV------DVIVNAANPSLM-GGGGVDGAIHRAAGPQLLEACKAVRQQQGECPP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI L G VIH +GP
Sbjct: 63 GHAVIT-------LAGDLPAKAVIHAVGP 84
>gi|390475439|ref|XP_003734958.1| PREDICTED: LOW QUALITY PROTEIN: poly [ADP-ribose] polymerase 14
[Callithrix jacchus]
Length = 1797
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 361 LCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV---ATAERAKSLYPGNSVIVPLPST 417
L +V+ NAAN LK GG+ AA+ AAGP L+ +R L PGN++I
Sbjct: 813 LPVDVVVNAANEDLK-HYGGLAAALSKAAGPELQADCDQIVKREGKLLPGNAIISK---- 867
Query: 418 SPLCGREGVTHVIHVLGPNMN 438
G+ HVIH +GP N
Sbjct: 868 ---AGKLPYHHVIHAVGPCWN 885
>gi|383457885|ref|YP_005371874.1| metallophosphoesterase [Corallococcus coralloides DSM 2259]
gi|380734000|gb|AFE10002.1| metallophosphoesterase [Corallococcus coralloides DSM 2259]
Length = 852
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 22 LVIMVGAPGSGKSTFCEHVMR-----SSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV+++G GSGKSTF + SS + D N+ + + L A+ L
Sbjct: 10 LVVLIGPSGSGKSTFARRHFKPTEVLSSDTYRGFVSDDENNQEATKDAFETLRYVAAKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
+G +D N++ E R FV+L V A+VLD+P + CI R+ +R + + +
Sbjct: 70 ARGLLTVVDATNVQPESRKAFVELAREYHVLPVALVLDVPERTCIERNQQRPDRTASFRF 129
Query: 135 GK-AAAVVNRMLQKKELPKLSEGFSRITLCQ 164
K + ++R L+ E EGF + + +
Sbjct: 130 VKNQVSQMHRSLRGLE----REGFRHLHVLK 156
>gi|345452647|gb|AEN94533.1| non-structural polyprotein p200 [Rubella virus]
Length = 2116
Score = 44.7 bits (104), Expect = 0.16, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 14/101 (13%)
Query: 363 CNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCG 422
C V+ NAAN L G GV AIF+ A PAL A R G +V P
Sbjct: 833 CKVVVNAANEGLL-AGSGVCGAIFANATPAL-AADCRRLAPCPTGEAVATPGHGC----- 885
Query: 423 REGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSL 463
G H+IH + P PR P L+ +G +L +AY S+
Sbjct: 886 --GYAHIIHAVAPR-RPRDPAALE----EGEALLERAYRSI 919
>gi|328791235|ref|XP_624633.2| PREDICTED: bifunctional polynucleotide phosphatase/kinase-like
[Apis mellifera]
Length = 567
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 66/150 (44%), Gaps = 25/150 (16%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q +++MVG PGSGKS F ++ + + + +DT+ G+ +C+T L +
Sbjct: 411 QEIILMVGCPGSGKSYFVKNYLDH----YGYVNRDTL-----GSWKKCVTVMEKYLDEKS 461
Query: 80 SVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAK-LCISRSVKRIEHEGNLQ----- 133
SV +D N + R ++++ A ++P + ++ S+ +H +
Sbjct: 462 SVVIDNTNPDCVSRQRYIEV--------AKKYNIPVRCFVMTTSIDHAKHNNKFRELTDP 513
Query: 134 --GGKAAAVVNRMLQKKELPKLSEGFSRIT 161
++N ++ + P L EGF I
Sbjct: 514 SHAKVNDVIINSYVKNFQQPSLEEGFKEIV 543
>gi|159484174|ref|XP_001700135.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272631|gb|EDO98429.1| predicted protein [Chlamydomonas reinhardtii]
Length = 160
Score = 44.7 bits (104), Expect = 0.16, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSP---L 420
+ I NAAN R+ GGGGV+ AI AAGP L A AE +YPG +P L
Sbjct: 27 DAIVNAANERML-GGGGVDGAIHRAAGPQLVRACAE-VPEVYPGVRCPTGEARITPGFHL 84
Query: 421 CGREGVTHVIHVLGP 435
R HVIH +GP
Sbjct: 85 KAR----HVIHTVGP 95
>gi|425735181|ref|ZP_18853496.1| Appr-1-p processing domain-containing protein [Brevibacterium casei
S18]
gi|425480109|gb|EKU47278.1| Appr-1-p processing domain-containing protein [Brevibacterium casei
S18]
Length = 177
Score = 44.7 bits (104), Expect = 0.16, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT ++ + I NAAN L GGGGV+ AI AAGP+L E ++ +P
Sbjct: 8 GDITTVHA------DAIVNAANSSLL-GGGGVDGAIHRAAGPSLLEEAREIRRTTHPRG- 59
Query: 410 VIVPLPSTSPLCGREGVTHVIHVLGPNMN 438
+ P + + G VIH +GPN N
Sbjct: 60 -LPPGQAVATGAGDLPARWVIHTVGPNRN 87
>gi|329849996|ref|ZP_08264842.1| calcineurin-like phosphoesterase family protein [Asticcacaulis
biprosthecum C19]
gi|328841907|gb|EGF91477.1| calcineurin-like phosphoesterase family protein [Asticcacaulis
biprosthecum C19]
Length = 839
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 22/189 (11%)
Query: 22 LVIMVGAPGSGKSTFC-EHVMR----SSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKS+F +H + SS + D N+ + + L A L
Sbjct: 13 LVLLIGASGSGKSSFARKHFLPTEVISSDYCRGLVSDDENNQAATKDAFEVLNFIAGKRL 72
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
G+ +D N++ E R + L V A+VL+LP ++C +R+ R + +
Sbjct: 73 AAGRLTVIDATNVQPESRKSLIDLARRHHVIPVAIVLNLPREVCHARNQSRTDRD----F 128
Query: 135 GKAAAVVNRMLQKKELPKL-SEGFSRITLCQNENDVQAAL--------DTYSGLGPLDTL 185
GK ++ L L EGFS +T+ + + A D + GP D +
Sbjct: 129 GKGVVWGQSDSLRRSLKGLRKEGFSHVTVLDSVEAIDAVRIERAPLWPDKKTQTGPFDII 188
Query: 186 --PHGSFGQ 192
HG F +
Sbjct: 189 GDVHGCFDE 197
>gi|402817810|ref|ZP_10867397.1| hypothetical protein PAV_9c02360 [Paenibacillus alvei DSM 29]
gi|402504782|gb|EJW15310.1| hypothetical protein PAV_9c02360 [Paenibacillus alvei DSM 29]
Length = 319
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 20/159 (12%)
Query: 24 IMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKV----------QCLTSASS 73
++ G PGSGKS + + + + + D+I + G + +
Sbjct: 6 MLAGIPGSGKSHYAKELCKQ--HKAIHVATDSIRQRLFGDEAKQKNTYFVFDEAFAQIEQ 63
Query: 74 ALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQ 133
AL G++V D N+ R++R F+K E V V P + I R+ R +
Sbjct: 64 ALASGRNVVFDATNVNRDRRLKFLK-RFKEFPVECHVCSTPYDIAIQRAQSR-------K 115
Query: 134 GGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAA 172
AV+++ + E P + EGF +I + ++V A
Sbjct: 116 RKIDEAVLSKFAKHFEFPVIGEGFQQIHIVHAPSEVLLA 154
>gi|408528659|emb|CCK26833.1| phosphatase [Streptomyces davawensis JCM 4913]
Length = 845
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 17/162 (10%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTIN---KGKSGTK--VQCLTS-ASSAL 75
LV++VGA GSGKSTF + + + C+ ++ +S T+ L A L
Sbjct: 16 LVVLVGASGSGKSTFARRHFKPTEVISSDFCRGLVSDDENDQSATRDAFDVLHYIAGKRL 75
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D +++ + R + L + DV A+VLD+P ++C R+ R + +
Sbjct: 76 AAGRRTVVDATSVQSDARKQLIAL-AKQYDVLPIAIVLDVPEEMCAERNAARTD-----R 129
Query: 134 GGKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAA 172
V+ R ++ ++ L L EGF ++ + + +++ A
Sbjct: 130 ADMPRRVIQRHIRELRRSLRHLEREGFRKVHVLRGVEEIEHA 171
>gi|261328669|emb|CBH11647.1| polynucleotide kinase 3'-phosphatase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 476
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q +++ VG PG GK+TF E +N+ K T+ +CL A K GK
Sbjct: 311 QEMIVFVGYPGCGKTTFFERFFEPHG-------YAHVNRDKLQTREKCLAEARRWWKAGK 363
Query: 80 SVFLDRCNLEREQRTDFVKL 99
SV +D N E FV++
Sbjct: 364 SVVIDNTNPSHEDCRVFVEV 383
>gi|78043303|ref|YP_359450.1| hypothetical protein CHY_0594 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995418|gb|ABB14317.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 181
Score = 44.3 bits (103), Expect = 0.19, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 11/99 (11%)
Query: 337 QKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA 396
+K + K +GDIT+ + I NAAN RL GGGGV+ AI A GP +
Sbjct: 2 EKKVGNSKIILKLGDITKEKV------DAIVNAANSRLA-GGGGVDGAIHRAGGPKI--- 51
Query: 397 TAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
E + + V+ P + + G +VIH +GP
Sbjct: 52 -MEECREIINKIGVLPPGEAVATTAGNLPAKYVIHTVGP 89
>gi|313233397|emb|CBY24512.1| unnamed protein product [Oikopleura dioica]
Length = 230
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 49/94 (52%), Gaps = 25/94 (26%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL--EVATAERAKSLYPG 407
GDIT+L T + I NAAN L GGGGV+ AI AAGP L E T + K+ G
Sbjct: 13 GDITKLKT------DAIVNAANRSL-LGGGGVDGAIHRAAGPELFKECRTIKGCKT---G 62
Query: 408 NSVIVP---LPSTSPLCGREGVTHVIHVLGPNMN 438
++ I LP+ T +IH +GPN+N
Sbjct: 63 DAKITHGYNLPA----------TWIIHTVGPNLN 86
>gi|114565891|ref|YP_753045.1| phosphatase [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114336826|gb|ABI67674.1| phosphatase [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 176
Score = 44.3 bits (103), Expect = 0.19, Method: Composition-based stats.
Identities = 37/96 (38%), Positives = 48/96 (50%), Gaps = 20/96 (20%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDITR VI NAAN L+ GGGGV+ AI AAGP L+ ++ A + PG +
Sbjct: 13 GDITRQEDMA-----VIVNAANSSLR-GGGGVDGAIHRAAGPELKKESSALA-PIGPGQA 65
Query: 410 VIV---PLPSTSPLCGREGVTHVIHVLGPNMNPRRP 442
VI LP+ +VIH +GP +P
Sbjct: 66 VITGAYRLPN----------RYVIHCVGPVYGVHKP 91
>gi|428780430|ref|YP_007172216.1| kinase [Dactylococcopsis salina PCC 8305]
gi|428694709|gb|AFZ50859.1| putative kinase [Dactylococcopsis salina PCC 8305]
Length = 578
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 35/174 (20%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTK----------------V 65
LVI+ G GSGKST CE V + P + DTI + G++
Sbjct: 10 LVILSGPSGSGKSTVCEQVAK-QYHPSMILSSDTIREQFFGSRPTLEGIKPQPVDDRLIF 68
Query: 66 QCLTSAS-SALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVK 124
Q L + S L++G + F+D L + R DFVK+ A D P + I K
Sbjct: 69 QLLEQITESRLREGLTTFIDATMLSDKVREDFVKI--------AQKTDSPYLVLIFDVDK 120
Query: 125 RIEHEGNLQGGKAA--AVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTY 176
I H+ N K V+N+ +++ + F+ +D + LD Y
Sbjct: 121 DILHQRNRSREKVVPTEVLNKQIRRHQKQSRYPYFT-------SDDFKITLDVY 167
>gi|313246956|emb|CBY35802.1| unnamed protein product [Oikopleura dioica]
Length = 230
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 49/94 (52%), Gaps = 25/94 (26%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL--EVATAERAKSLYPG 407
GDIT+L T + I NAAN L GGGGV+ AI AAGP L E T + K+ G
Sbjct: 13 GDITKLKT------DAIVNAANRSL-LGGGGVDGAIHRAAGPELFKECRTIKGCKT---G 62
Query: 408 NSVIVP---LPSTSPLCGREGVTHVIHVLGPNMN 438
++ I LP+ T +IH +GPN+N
Sbjct: 63 DAKITHGYNLPA----------TWIIHTVGPNLN 86
>gi|430760484|ref|YP_007216341.1| Appr-1-p processing domain-containing protein [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430010108|gb|AGA32860.1| Appr-1-p processing domain-containing protein [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 179
Score = 44.3 bits (103), Expect = 0.19, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 40/81 (49%), Gaps = 13/81 (16%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGR 423
+ + NAAN +L+PGGG V AI AAGP LE A + PG +VI G
Sbjct: 25 DAVVNAANAQLRPGGG-VAGAIHRAAGPGLEQECRPLA-PIAPGQAVIT---------GG 73
Query: 424 EGVT--HVIHVLGPNMNPRRP 442
G+ HV+H LGP P
Sbjct: 74 HGLPNRHVVHCLGPVFGHDEP 94
>gi|72389971|ref|XP_845280.1| polynucleotide kinase 3'-phosphatase [Trypanosoma brucei TREU927]
gi|62359272|gb|AAX79714.1| polynucleotide kinase 3'-phosphatase, putative [Trypanosoma brucei]
gi|70801815|gb|AAZ11721.1| polynucleotide kinase 3'-phosphatase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 476
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q +++ VG PG GK+TF E +N+ K T+ +CL A K GK
Sbjct: 311 QEMIVFVGYPGCGKTTFFERFFEPHG-------YAHVNRDKLQTREKCLAEARRWWKAGK 363
Query: 80 SVFLDRCNLEREQRTDFVKL 99
SV +D N E FV++
Sbjct: 364 SVVIDNTNPSHEDCRVFVEV 383
>gi|429119010|ref|ZP_19179754.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Cronobacter sakazakii 680]
gi|426326560|emb|CCK10491.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Cronobacter sakazakii 680]
Length = 180
Score = 44.3 bits (103), Expect = 0.19, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 43/89 (48%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDITR+ +VI NAAN L GGGGV+ AI AAGP L A ++ P
Sbjct: 10 GDITRINV------DVIVNAANPSLM-GGGGVDGAIHRAAGPTLLAACRQVRQQQGECQP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI G V+H +GP
Sbjct: 63 GHAVITE-------AGDLAAKAVVHTVGP 84
>gi|262043246|ref|ZP_06016380.1| RNase III regulator YmdB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039428|gb|EEW40565.1| RNase III regulator YmdB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 175
Score = 44.3 bits (103), Expect = 0.19, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 45/90 (50%), Gaps = 17/90 (18%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLY 405
+GDIT L +VI NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 9 LGDITTLDV------DVIVNAANPSLL-GGGGVDGAIHRAAGPALLAACKQVLQQQGECP 61
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PG +VI + G + VIH +GP
Sbjct: 62 PGYAVIT-------IAGNLPASAVIHTVGP 84
>gi|291436677|ref|ZP_06576067.1| serine/threonine protein phosphatase [Streptomyces ghanaensis ATCC
14672]
gi|291339572|gb|EFE66528.1| serine/threonine protein phosphatase [Streptomyces ghanaensis ATCC
14672]
Length = 855
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 15/161 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV++VGA GSGKSTF + + + C+ D ++ S L A L
Sbjct: 26 LVVLVGASGSGKSTFARRHFKPTEVLSSDFCRGLVADDENDQSASRDAFDVLHHIAGKRL 85
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
G+ +D +++++ R + L +V A+VLD+P ++C R+ R + +
Sbjct: 86 AAGRRTVVDATSVQQDARRQLIDLARQHDVLPIAIVLDVPEEVCAERNATRAD-----RA 140
Query: 135 GKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAA 172
VV R ++ ++ L L EGF ++ + + +V+ A
Sbjct: 141 DLPRRVVRRHIRELRRSLRHLEREGFRKVHVLRGVEEVEHA 181
>gi|258404687|ref|YP_003197429.1| Appr-1-p processing protein [Desulfohalobium retbaense DSM 5692]
gi|257796914|gb|ACV67851.1| Appr-1-p processing domain protein [Desulfohalobium retbaense DSM
5692]
Length = 188
Score = 44.3 bits (103), Expect = 0.20, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 23/92 (25%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAK---SLYP 406
GDIT G + NAAN RL GGGGV+ A+ AAGP L A E + +L
Sbjct: 18 GDITAAEVGA------VVNAANSRLA-GGGGVDGALQRAAGPQLLQAGQEYVREHGALSV 70
Query: 407 GNSVIVP---LPSTSPLCGREGVTHVIHVLGP 435
G++V+ P LP+ + VIH +GP
Sbjct: 71 GDAVVTPGFALPA----------SQVIHTVGP 92
>gi|443894974|dbj|GAC72320.1| polynucleotide kinase 3' phosphatase [Pseudozyma antarctica T-34]
Length = 302
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
+Q ++++ G GSGKSTF ++ W R QD + G + + +A +AL G
Sbjct: 26 EQYMLVLSGLIGSGKSTFARALVEHFG-DWRRCNQDEL-----GDRHAVVYAARTALLAG 79
Query: 79 KSVFLDRCNLEREQRTDFVKLGGP--------EVDVHAVVLDLPAKLCISRSVKRIE--- 127
+V +DR N++ +QR +++L E V + L + I + +R++
Sbjct: 80 HNVVIDRTNIDAKQRRTWLELARELNASTADGERTRSVVTISLTLTISIDEAERRLKLRV 139
Query: 128 -HEGNLQGGKAAAVVNRMLQKKELPKLSEGF 157
HE +A ++ L+ + EGF
Sbjct: 140 GHETIRTPEQALGILPHFLRTYQKATSEEGF 170
>gi|357635096|ref|ZP_09132974.1| Appr-1-p processing domain protein [Desulfovibrio sp. FW1012B]
gi|357583650|gb|EHJ48983.1| Appr-1-p processing domain protein [Desulfovibrio sp. FW1012B]
Length = 184
Score = 44.3 bits (103), Expect = 0.21, Method: Composition-based stats.
Identities = 39/92 (42%), Positives = 45/92 (48%), Gaps = 23/92 (25%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE---RAKSLYP 406
GDIT T G + I NAAN L GGGGV+ AI AAGP L A + R L
Sbjct: 19 GDIT---TDDG---DAIVNAANSALA-GGGGVDGAIHRAAGPKLLAACRDIIARIGRLPA 71
Query: 407 GNSVIVP---LPSTSPLCGREGVTHVIHVLGP 435
G +VI P LP+ HVIH +GP
Sbjct: 72 GGAVITPGFDLPA----------RHVIHTVGP 93
>gi|453068115|ref|ZP_21971399.1| serine/threonine protein phosphatase PrpA [Rhodococcus qingshengii
BKS 20-40]
gi|452766437|gb|EME24683.1| serine/threonine protein phosphatase PrpA [Rhodococcus qingshengii
BKS 20-40]
Length = 847
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 22/164 (13%)
Query: 22 LVIMVGAPGSGKSTFC-------EHVMRSSARPWARICQDTINKGKSGTKVQCLT-SASS 73
LV+++G GSGKSTF E + + R W + D ++ + + L A+
Sbjct: 11 LVVLIGVSGSGKSTFAARHFGEFETLSSDTFRGW--VSDDPNSQESTSDAFEVLEFVAAK 68
Query: 74 ALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGN 131
L++G+ +D N++ R V L E D+ AVVLD+P +C +R+ R +
Sbjct: 69 RLRRGRLTVVDATNVQPAARKRLVAL-AREHDILPVAVVLDIPESVCSARNDARSDRTFG 127
Query: 132 LQGGKAAAVVNRMLQK--KELPKLS-EGFSRITLCQNENDVQAA 172
V+ R Q+ + L L EGF + + + E+ V A
Sbjct: 128 RD------VIRRQHQQLTRSLRGLGKEGFRSVHILRGEDAVSEA 165
>gi|423128562|ref|ZP_17116241.1| UPF0189 protein ymdB [Klebsiella oxytoca 10-5250]
gi|376393044|gb|EHT05705.1| UPF0189 protein ymdB [Klebsiella oxytoca 10-5250]
Length = 182
Score = 44.3 bits (103), Expect = 0.21, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 45/90 (50%), Gaps = 17/90 (18%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLY 405
+GDIT+L +VI NAAN L GGGGV+ AI AAGP L A ++
Sbjct: 9 LGDITKL------AVDVIVNAANPSLL-GGGGVDGAIHRAAGPELLAACKVVRQQQGECP 61
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PG++VI G + VIH +GP
Sbjct: 62 PGHAVITA-------AGNLPASAVIHAVGP 84
>gi|86157238|ref|YP_464023.1| Appr-1-p processing [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773749|gb|ABC80586.1| Appr-1-p processing [Anaeromyxobacter dehalogenans 2CP-C]
Length = 177
Score = 44.3 bits (103), Expect = 0.22, Method: Composition-based stats.
Identities = 37/87 (42%), Positives = 43/87 (49%), Gaps = 17/87 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERA-KSLYPGN 408
GDITRL+ + I NAAN L GGGGV+ AI AAGP E+ A RA G
Sbjct: 15 GDITRLHV------DAIVNAANATLL-GGGGVDGAIHRAAGP--ELLEACRALGGARTGE 65
Query: 409 SVIVPLPSTSPLCGREGVTHVIHVLGP 435
+ I P R HVIH +GP
Sbjct: 66 AKITP-------GFRLAARHVIHAVGP 85
>gi|386843110|ref|YP_006248168.1| serine/threonine protein phosphatase [Streptomyces hygroscopicus
subsp. jinggangensis 5008]
gi|374103411|gb|AEY92295.1| serine/threonine protein phosphatase [Streptomyces hygroscopicus
subsp. jinggangensis 5008]
gi|451796401|gb|AGF66450.1| serine/threonine protein phosphatase [Streptomyces hygroscopicus
subsp. jinggangensis TL01]
Length = 855
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV++VGA GSGKSTF + + + C+ D ++ S L A L
Sbjct: 18 LVVLVGASGSGKSTFARRHFKPTEVISSDFCRGLVADDENDQSASRDAFDVLHYIAGKRL 77
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D +++++ R + L DV A+VLD+P ++C R+ R + +
Sbjct: 78 AAGRRTVVDATSVQQDGRRQLIDL-AKRYDVLPIAIVLDVPEEVCAERNAARTD-----R 131
Query: 134 GGKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAA 172
V+ R ++ ++ L L EGF ++ + + +V+ A
Sbjct: 132 ADMPRRVIQRHIRELRRSLRHLEREGFRKVHVLRGVREVENA 173
>gi|402859213|ref|XP_003894061.1| PREDICTED: poly [ADP-ribose] polymerase 14 [Papio anubis]
Length = 1800
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 361 LCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV---ATAERAKSLYPGNSVIVPLPST 417
L +V+ NA+N LK GG+ AA+ AAGP L+ +R L PGN+ I
Sbjct: 814 LPVDVVVNASNEDLK-HYGGLAAALSKAAGPELQADCDQIVKREGRLLPGNATISK---- 868
Query: 418 SPLCGREGVTHVIHVLGPNMNP-RRPNCL 445
G+ HVIH +GP N P C+
Sbjct: 869 ---AGKLPYHHVIHAVGPRWNGCEAPRCV 894
>gi|395232108|ref|ZP_10410360.1| RNase III inhibitor [Enterobacter sp. Ag1]
gi|394733612|gb|EJF33229.1| RNase III inhibitor [Enterobacter sp. Ag1]
Length = 176
Score = 44.3 bits (103), Expect = 0.22, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPA-LEVATAER--AKSLYP 406
GDIT++ +VI NAAN L GGGGV+ AI AAGPA LE A R P
Sbjct: 10 GDITQIEV------DVIVNAANPSLM-GGGGVDGAIHRAAGPALLEACKAVRQLQGECPP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G +VI G V VIH +GP
Sbjct: 63 GQAVITE-------AGNIPVKAVIHAVGP 84
>gi|343427403|emb|CBQ70930.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 313
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
+Q LV++ G GSGKSTF + + P R C N+ + G + + +A +AL G
Sbjct: 49 EQYLVVLSGLIGSGKSTFARALCQYY--PDWRCC----NQDELGDRHAVVYAARTALLAG 102
Query: 79 KSVFLDRCNLEREQRTDFVKLG 100
+V +DR N++ +QR +++L
Sbjct: 103 HNVVIDRTNIDAKQRRTWLELA 124
>gi|384498862|gb|EIE89353.1| hypothetical protein RO3G_14064 [Rhizopus delemar RA 99-880]
Length = 379
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 11/144 (7%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
K L++ +G P SGK++F ++ P I +N+ + T+ +C+ + ALK
Sbjct: 223 KNELILCIGYPASGKTSF----VKKHLVPKGYIY---VNQDELKTRDKCIKACQEALKNQ 275
Query: 79 KSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKA 137
+SV +D N E R ++ L V V + L + R H+ N
Sbjct: 276 QSVVIDNTNPEIATRQLYINLAQKANVPVRCLYFGQNEDLAQHNNYYRAIHKSNRD--LI 333
Query: 138 AAVVNRMLQKK-ELPKLSEGFSRI 160
+++V R + K + P L EGFS I
Sbjct: 334 SSIVFRTFKSKFQEPTLKEGFSEI 357
>gi|162455184|ref|YP_001617551.1| polyA polymerase-like protein [Sorangium cellulosum So ce56]
gi|161165766|emb|CAN97071.1| polyA polymerase related protein [Sorangium cellulosum So ce56]
Length = 376
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 62/144 (43%), Gaps = 20/144 (13%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINK-------GKSGTKVQCLTS-ASS 73
+V+M G PG+GK T+ H + W + D + G VQ A
Sbjct: 236 VVVMSGLPGAGKDTYVRHHLAG----WPVVSLDALRSELEIDPADTQGQVVQAARERAKE 291
Query: 74 ALKKGKSVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNL 132
L++G+ + NL R++R +++ + V +++PA +++ R
Sbjct: 292 YLRRGERFVWNATNLSRQRRGPLLQMAADYGARIRVVYVEVPASTLFAQNRAR------- 344
Query: 133 QGGKAAAVVNRMLQKKELPKLSEG 156
+ AV+ RM+++ E+P +E
Sbjct: 345 EAAVPEAVIRRMIERWEIPAKTEA 368
>gi|426389671|ref|XP_004061243.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional polynucleotide
phosphatase/kinase [Gorilla gorilla gorilla]
Length = 521
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 7/66 (10%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+T+ +ALK+GK V
Sbjct: 367 VVVAVGFPGAGKSTFLKKHLVSAG--YVHVNRDTL-----GSWQRCVTTCETALKQGKRV 419
Query: 82 FLDRCN 87
+D N
Sbjct: 420 AIDNTN 425
>gi|330001871|ref|ZP_08304130.1| macro domain protein [Klebsiella sp. MS 92-3]
gi|328537533|gb|EGF63759.1| macro domain protein [Klebsiella sp. MS 92-3]
Length = 175
Score = 43.9 bits (102), Expect = 0.23, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 46/90 (51%), Gaps = 17/90 (18%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLY 405
+GDIT L +VI NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 9 LGDITTLDV------DVIVNAANPSLL-GGGGVDGAIPRAAGPALLAACKQVLQQQGECP 61
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PG++VI + G + VIH +GP
Sbjct: 62 PGHAVIT-------IAGNLPASAVIHTVGP 84
>gi|345009881|ref|YP_004812235.1| metallophosphoesterase [Streptomyces violaceusniger Tu 4113]
gi|344036230|gb|AEM81955.1| metallophosphoesterase [Streptomyces violaceusniger Tu 4113]
Length = 874
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 21/157 (13%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+ VG GSGKSTF H R + + +C+ D ++ + L L
Sbjct: 15 LVVFVGTTGSGKSTFARHHFRPTQIVSSDVCRGLVADDENDQSATPDAFDVLHYIVDKRL 74
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D N+ E R + L E DV A+VLD+P C R+ +R + +
Sbjct: 75 AAGRLTVVDATNVRSESRRSLIGLAR-EHDVLPVAIVLDIPEGECARRNAQRPD-----R 128
Query: 134 GGKAAAVVNRMLQKKELPKL-----SEGFSRITLCQN 165
G V+ R Q++EL + EGF ++ + +
Sbjct: 129 AGMPDHVIPR--QRRELRRSLKSLEREGFRKVHILRG 163
>gi|297285141|ref|XP_001105869.2| PREDICTED: poly [ADP-ribose] polymerase 14-like [Macaca mulatta]
Length = 1800
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 45/103 (43%), Gaps = 24/103 (23%)
Query: 361 LCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV---ATAERAKSLYPGNSVIVPLPST 417
L +V+ NA+N LK GG+ AA+ AAGP L+ +R L PGN+ I
Sbjct: 814 LPVDVVVNASNEDLK-HYGGLAAALSKAAGPELQADCDQIVKREGRLLPGNATISK---- 868
Query: 418 SPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAY 460
G+ HVIH +GP N GCE R Y
Sbjct: 869 ---AGKLPYHHVIHAVGPRWN-------------GCEAPRCVY 895
>gi|256087294|ref|XP_002579807.1| polynucleotide kinase-3'-phosphatase [Schistosoma mansoni]
Length = 469
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 30/142 (21%)
Query: 27 GAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSVFLDRC 86
G P SGK R C D ++ GT +C+ + A+ K V +D
Sbjct: 182 GRPASGK------------RKKDHSCADRLDN--VGTWQKCVQAVEQAISKSLPVVVDNT 227
Query: 87 NLEREQRTDFVKLGGPEVDVHAVVLDLPAK-LCISRSVKRIEHEGNLQGGKAAA------ 139
N++ E RT ++K+ A V D+P K + S++ +H + ++
Sbjct: 228 NMDLESRTRYIKI--------AKVWDIPVKCFIMETSMEHAQHNERFRALTNSSHKQISQ 279
Query: 140 -VVNRMLQKKELPKLSEGFSRI 160
V N M K E P + EG+ I
Sbjct: 280 MVYNMMKSKYEKPTMEEGYQEI 301
>gi|78357166|ref|YP_388615.1| Appr-1-p processing protein [Desulfovibrio alaskensis G20]
gi|78219571|gb|ABB38920.1| Appr-1-p processing domain protein [Desulfovibrio alaskensis G20]
Length = 183
Score = 43.9 bits (102), Expect = 0.24, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 48/104 (46%), Gaps = 19/104 (18%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE---RAKSLYPGNSVIVPLPSTSPL 420
+ + NAAN RL GGGGV+ A+ +AAGPAL + R L G +++ P
Sbjct: 23 DAVVNAANSRLA-GGGGVDGALHAAAGPALLADCSRWVARHGLLPAGKAMVTP------- 74
Query: 421 CGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLF 464
R HVIH +GP + N LR+AY S F
Sbjct: 75 AHRLPARHVIHTVGPVWRGGKNN--------EETTLRQAYESCF 110
>gi|326428361|gb|EGD73931.1| hypothetical protein PTSG_12341 [Salpingoeca sp. ATCC 50818]
Length = 403
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 553 TSKAWGSWAQALYRTAMYPERHKDDLLEISDDVVVLNDLYPK 594
TS+ WA AL +PERH DD++ + D +V+ND YPK
Sbjct: 214 TSECVDHWANALTELVRHPERHADDIVYETVDTLVINDKYPK 255
>gi|226185566|dbj|BAH33670.1| putative serine/threonine protein phosphatase PrpA [Rhodococcus
erythropolis PR4]
Length = 847
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 22/164 (13%)
Query: 22 LVIMVGAPGSGKSTFC-------EHVMRSSARPWARICQDTINKGKSGTKVQCLT-SASS 73
LV+++G GSGKSTF E + + R W + D ++ + + L A+
Sbjct: 11 LVVLIGVSGSGKSTFAARHFGEYETLSSDTFRGW--VSDDPNSQESTSDAFEVLEFVAAK 68
Query: 74 ALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGN 131
L++G+ +D N++ R V L E D+ AVVLD+P +C +R+ R +
Sbjct: 69 RLRRGRLTVVDATNVQPAARKRLVAL-AREHDILPVAVVLDVPESVCSARNDARSDRTFG 127
Query: 132 LQGGKAAAVVNRMLQK--KELPKLS-EGFSRITLCQNENDVQAA 172
V+ R Q+ + L L EGF + + + E+ V A
Sbjct: 128 RD------VIRRQHQQLTRSLRGLGKEGFRSVHILRGEDAVSEA 165
>gi|381183042|ref|ZP_09891809.1| RNase III inhibitor [Listeriaceae bacterium TTU M1-001]
gi|380317053|gb|EIA20405.1| RNase III inhibitor [Listeriaceae bacterium TTU M1-001]
Length = 179
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 55/120 (45%), Gaps = 22/120 (18%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE---RAKSLYP 406
GDIT+L + + NAAN L GGGGV+ AI AAGP L A E + S
Sbjct: 8 GDITKLKV------DALVNAANNTLL-GGGGVDGAIHQAAGPELLAACKEIIDKIGSCAT 60
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGPNM---NPRRPNCLDGDYVKGCEILRKAYTSL 463
G +VI L R +VIH +GP + R PN L Y K E+ AY L
Sbjct: 61 GEAVIT---KGFQLEAR----YVIHTVGPIWHGGDKREPNLLASCYWKSLEL--AAYKEL 111
>gi|339998984|ref|YP_004729867.1| hypothetical protein SBG_0984 [Salmonella bongori NCTC 12419]
gi|339512345|emb|CCC30081.1| conserved hypothetical protein [Salmonella bongori NCTC 12419]
Length = 180
Score = 43.9 bits (102), Expect = 0.24, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 43/89 (48%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDITRL + I NAAN L GGGGV+ AI AAGP+L A ++
Sbjct: 11 GDITRLGV------DAIVNAANASLM-GGGGVDGAIHRAAGPSLLDACKKIRQQQGECPT 63
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G +VI P G+ VIH +GP
Sbjct: 64 GQAVITP-------AGKLSAKAVIHTVGP 85
>gi|229493647|ref|ZP_04387432.1| serine/threonine protein phosphatase [Rhodococcus erythropolis
SK121]
gi|229319608|gb|EEN85444.1| serine/threonine protein phosphatase [Rhodococcus erythropolis
SK121]
Length = 847
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 22/164 (13%)
Query: 22 LVIMVGAPGSGKSTFC-------EHVMRSSARPWARICQDTINKGKSGTKVQCLT-SASS 73
LV+++G GSGKSTF E + + R W + D ++ + + L A+
Sbjct: 11 LVVLIGVSGSGKSTFAARHFGEFETLSSDTFRGW--VSDDPNSQESTSDAFEVLEFVAAK 68
Query: 74 ALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGN 131
L++G+ +D N++ R V L E D+ AVVLD+P +C +R+ R +
Sbjct: 69 RLRRGRLTVVDATNVQPAARKRLVAL-AREHDILPVAVVLDVPESVCSARNNARSDRTFG 127
Query: 132 LQGGKAAAVVNRMLQK--KELPKLS-EGFSRITLCQNENDVQAA 172
V+ R Q+ + L L EGF + + + E+ V A
Sbjct: 128 RD------VIRRQHQQLTRSLRGLGKEGFRSVHILRGEDAVSEA 165
>gi|260836885|ref|XP_002613436.1| hypothetical protein BRAFLDRAFT_123909 [Branchiostoma floridae]
gi|229298821|gb|EEN69445.1| hypothetical protein BRAFLDRAFT_123909 [Branchiostoma floridae]
Length = 779
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 67/133 (50%), Gaps = 23/133 (17%)
Query: 343 KKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL--EVATAER 400
+K + GDIT+L + I+NAAN L GGGGV+ AI SAAGP L E AT
Sbjct: 494 EKVSLWRGDITQLE------IDAISNAANESLL-GGGGVDGAIHSAAGPTLVKETATLGG 546
Query: 401 AKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAY 460
++ + S LP+ +V+H +GP ++P+ L+G Y K C L K +
Sbjct: 547 CETGHAKLSGGHRLPA----------KYVLHAVGPIG--QKPDKLEGCY-KDCMALAKEH 593
Query: 461 TSLFEGFLSIVRS 473
L L ++RS
Sbjct: 594 -GLRSVMLILIRS 605
>gi|374336241|ref|YP_005092928.1| Appr-1-p processing [Oceanimonas sp. GK1]
gi|372985928|gb|AEY02178.1| Appr-1-p processing [Oceanimonas sp. GK1]
Length = 179
Score = 43.9 bits (102), Expect = 0.25, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 36/74 (48%), Gaps = 15/74 (20%)
Query: 365 VIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVP---LPSTSPLC 421
VI NAAN L P GGGV AI AAGP L R + PG +VI LP+
Sbjct: 25 VIVNAANGALLP-GGGVAGAIHRAAGPGL-AQECRRLAPIQPGEAVITGGHLLPN----- 77
Query: 422 GREGVTHVIHVLGP 435
HVIH LGP
Sbjct: 78 -----RHVIHCLGP 86
>gi|336383632|gb|EGO24781.1| hypothetical protein SERLADRAFT_449528 [Serpula lacrymans var.
lacrymans S7.9]
Length = 430
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 21/150 (14%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LV+ VG P GKS+F H + + I QDT+ GT+ +C+ + + L G S
Sbjct: 265 LVLFVGYPCLGKSSFYRHHFEPAE--YIHINQDTL-----GTRAKCVKAVTETLDAGDSC 317
Query: 82 FLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N + R ++ L ++ + V +L ++ R NL AA
Sbjct: 318 VVDNTNRDISTRKLYIDLAKKKKIPIRCFVFTGSMELAWHNNLYRAY---NLSPVTAARE 374
Query: 141 VNR----------MLQKKELPKLSEGFSRI 160
R E P+LSEGF+ I
Sbjct: 375 PKRDILPYLAFLGFRDNYEEPQLSEGFTEI 404
>gi|336370874|gb|EGN99214.1| hypothetical protein SERLA73DRAFT_182095 [Serpula lacrymans var.
lacrymans S7.3]
Length = 450
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 21/150 (14%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LV+ VG P GKS+F H + + I QDT+ GT+ +C+ + + L G S
Sbjct: 285 LVLFVGYPCLGKSSFYRHHFEPAE--YIHINQDTL-----GTRAKCVKAVTETLDAGDSC 337
Query: 82 FLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N + R ++ L ++ + V +L ++ R NL AA
Sbjct: 338 VVDNTNRDISTRKLYIDLAKKKKIPIRCFVFTGSMELAWHNNLYRAY---NLSPVTAARE 394
Query: 141 VNR----------MLQKKELPKLSEGFSRI 160
R E P+LSEGF+ I
Sbjct: 395 PKRDILPYLAFLGFRDNYEEPQLSEGFTEI 424
>gi|417789447|ref|ZP_12437097.1| RNase III inhibitor [Cronobacter sakazakii E899]
gi|449308697|ref|YP_007441053.1| RNase III inhibitor [Cronobacter sakazakii SP291]
gi|333956531|gb|EGL74184.1| RNase III inhibitor [Cronobacter sakazakii E899]
gi|449098730|gb|AGE86764.1| RNase III inhibitor [Cronobacter sakazakii SP291]
Length = 180
Score = 43.9 bits (102), Expect = 0.25, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 43/89 (48%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDITR+ +VI NAAN L GGGGV+ AI AAGP L A ++ P
Sbjct: 10 GDITRIDV------DVIVNAANPSLM-GGGGVDGAIHRAAGPTLLAACRQVRQQQGECQP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI G V+H +GP
Sbjct: 63 GHAVITE-------AGDLAAKAVVHTVGP 84
>gi|344208642|ref|YP_004793783.1| Appr-1-p processing protein [Stenotrophomonas maltophilia JV3]
gi|343780004|gb|AEM52557.1| Appr-1-p processing domain protein [Stenotrophomonas maltophilia
JV3]
Length = 199
Score = 43.9 bits (102), Expect = 0.26, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT L + I NAAN L GGGGV+ AI AAGPAL +A E+ L PG
Sbjct: 8 GDITTL------AVDAIVNAANETLL-GGGGVDGAIHRAAGPAL-LAECEQLPELRPG-- 57
Query: 410 VIVPLPSTSPLCGRE-GVTHVIHVLGP 435
V P HV+H +GP
Sbjct: 58 VRCPTGEVRATAAHALPARHVLHTVGP 84
>gi|365856735|ref|ZP_09396746.1| macro domain protein [Acetobacteraceae bacterium AT-5844]
gi|363717546|gb|EHM00915.1| macro domain protein [Acetobacteraceae bacterium AT-5844]
Length = 161
Score = 43.9 bits (102), Expect = 0.26, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 42/89 (47%), Gaps = 21/89 (23%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDITRL + I NAAN L PGGG V AI +AAGP L A A G +
Sbjct: 6 GDITRL------AVDAIVNAANSALAPGGG-VCGAIHAAAGPELARACAALG-GCPTGEA 57
Query: 410 VIVP---LPSTSPLCGREGVTHVIHVLGP 435
I P LP+ HVIH +GP
Sbjct: 58 RITPGFRLPA----------RHVIHAVGP 76
>gi|302769662|ref|XP_002968250.1| hypothetical protein SELMODRAFT_16132 [Selaginella moellendorffii]
gi|300163894|gb|EFJ30504.1| hypothetical protein SELMODRAFT_16132 [Selaginella moellendorffii]
Length = 166
Score = 43.9 bits (102), Expect = 0.26, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 52/116 (44%), Gaps = 12/116 (10%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDITR + G + I NAAN L GGGGV+ AI AAGP L A + + P
Sbjct: 17 GDITRWFKDGH--SDAIVNAAN-ELMLGGGGVDGAIHEAAGPDLYKA-CKTLPLVAPRTR 72
Query: 410 VIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFE 465
V +P R V +IH +GP + +K +LR AY + E
Sbjct: 73 CPVGQARETP-AFRLPVRRIIHTVGPTYH-------RSTRMKAAALLRDAYCNSLE 120
>gi|403508665|ref|YP_006640303.1| polynucleotide kinase-phosphatase [Nocardiopsis alba ATCC BAA-2165]
gi|402799253|gb|AFR06663.1| polynucleotide kinase-phosphatase [Nocardiopsis alba ATCC BAA-2165]
Length = 926
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCL-TSASSAL 75
LV++VG GSGKSTF S+ + C+ D ++ +G + L T L
Sbjct: 9 LVLLVGVSGSGKSTFAAEHFASTQVIGSDFCRGMVADDENDQTATGDAFKLLDTIVDIRL 68
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKR 125
++G +D N++R+ R +++ +V A+VLD+P L + R+ R
Sbjct: 69 RRGLLTVVDATNVQRKARESLIRIAKDNDVLTTAIVLDVPEALALERNRSR 119
>gi|375144938|ref|YP_005007379.1| Appr-1-p processing protein [Niastella koreensis GR20-10]
gi|361058984|gb|AEV97975.1| Appr-1-p processing domain protein [Niastella koreensis GR20-10]
Length = 169
Score = 43.9 bits (102), Expect = 0.27, Method: Composition-based stats.
Identities = 38/92 (41%), Positives = 45/92 (48%), Gaps = 17/92 (18%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPA-LEVATAERAKS--LYP 406
GD+TRL + I NAAN L GGGGV+ AI A GPA LE A RAK
Sbjct: 7 GDLTRLEV------DAIVNAANTSLL-GGGGVDGAIHRAGGPAILEECRAIRAKQGGCEV 59
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGPNMN 438
G +VI G+ +VIH +GP N
Sbjct: 60 GEAVITT-------AGKLPAKYVIHTVGPVWN 84
>gi|328854560|gb|EGG03692.1| hypothetical protein MELLADRAFT_89991 [Melampsora larici-populina
98AG31]
Length = 442
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 59/149 (39%), Gaps = 13/149 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG P GKS F + + IN+ K T +CL S +++ KS
Sbjct: 283 IVLFVGPPAIGKSQFYKTHFEPKG-------YEHINQDKLKTFEKCLKSVKESIQCSKSC 335
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEH-----EGNLQGG 135
+D N R ++KL + + D L + +V R + EGN +
Sbjct: 336 VIDNTNPSESTRHQYIKLSQDLGCSIRCIHFDSSIDLSLHNNVYRAFYGEKDAEGNRRHL 395
Query: 136 KAAAVVNRMLQKKELPKLSEGFSRITLCQ 164
L++ E P + EGF + L +
Sbjct: 396 LPGLAFGSYLKRFETPLVQEGFGEVALVR 424
>gi|27380821|ref|NP_772350.1| hypothetical protein bll5710 [Bradyrhizobium japonicum USDA 110]
gi|27353986|dbj|BAC50975.1| bll5710 [Bradyrhizobium japonicum USDA 110]
Length = 183
Score = 43.9 bits (102), Expect = 0.28, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 45/101 (44%), Gaps = 15/101 (14%)
Query: 338 KHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVAT 397
+ I +F + DIT L + I NAAN L GGGGV+ AI AAGP L VA
Sbjct: 6 RRIGGAEFEVIIADITTL------SVDAIVNAANTSLL-GGGGVDGAIHRAAGPDL-VAE 57
Query: 398 AERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMN 438
GN+ I + R HVIH +GP N
Sbjct: 58 CRMLHGCKTGNAKIT-------MGYRLKAAHVIHTVGPVWN 91
>gi|444431863|ref|ZP_21227024.1| serine/threonine protein phosphatase PrpA [Gordonia soli NBRC
108243]
gi|443887262|dbj|GAC68745.1| serine/threonine protein phosphatase PrpA [Gordonia soli NBRC
108243]
Length = 874
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 22/180 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMR-----SSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV++VG G+GKSTF V + SS + D ++ + + A+ L
Sbjct: 29 LVVLVGVSGAGKSTFARRVFQETEVLSSDAFRGLVADDPTDQSATTDAFSVIFDVAARRL 88
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAV--VLDLPAKLCISRSVKRIEHEGNLQ 133
++G +D ++ E R V L E DV AV VLD+P R+ R + +G +
Sbjct: 89 RRGLLTVVDATSVRPEDRRALVDL-AKEHDVFAVAIVLDVPLDELTRRTAGRTDVDGGVV 147
Query: 134 GGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGL--------GPLDTL 185
+ +R+L++ EGF + + + + + AA T + L GP D +
Sbjct: 148 VRQ-----HRLLRRYGRGLRKEGFRFVHILEGVDAIDAASITRTRLFSDRTDETGPFDII 202
>gi|408388001|gb|EKJ67697.1| hypothetical protein FPSE_12144 [Fusarium pseudograminearum CS3096]
Length = 220
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 51/101 (50%), Gaps = 28/101 (27%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYP--- 406
GDIT L + I NAAN L+ GG GV+ AI SAAGP L + +++L P
Sbjct: 49 GDITELR------IDAIVNAANKSLR-GGSGVDGAIHSAAGPDL----VKESRALGPIDT 97
Query: 407 GNSVIVP---LPSTSPLCGREGVTHVIHVLGPNM-NPRRPN 443
G++VI LP+ HVIH +GP N R PN
Sbjct: 98 GDAVITKGYNLPA----------KHVIHTVGPIFGNERHPN 128
>gi|419957531|ref|ZP_14473597.1| RNase III inhibitor [Enterobacter cloacae subsp. cloacae GS1]
gi|388607689|gb|EIM36893.1| RNase III inhibitor [Enterobacter cloacae subsp. cloacae GS1]
Length = 178
Score = 43.9 bits (102), Expect = 0.29, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDIT ++ +VI NAAN L GGGGV+ AI AAGP L A ++ P
Sbjct: 10 GDITTVHV------DVIVNAANSSLM-GGGGVDGAIHRAAGPQLLEACKTVRQQQGECPP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI L G VIH +GP
Sbjct: 63 GHAVIT-------LAGDLPAKAVIHTVGP 84
>gi|295096250|emb|CBK85340.1| Predicted phosphatase homologous to the C-terminal domain of
histone macroH2A1 [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 178
Score = 43.5 bits (101), Expect = 0.31, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDIT ++ +VI NAAN L GGGGV+ AI AAGP L A ++ P
Sbjct: 10 GDITTVHV------DVIVNAANSSLM-GGGGVDGAIHRAAGPQLLEACKTVRQQQGECPP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI L G VIH +GP
Sbjct: 63 GHAVIT-------LAGDLPAKAVIHTVGP 84
>gi|111219777|ref|YP_710571.1| serine/threonine protein phosphatase [Frankia alni ACN14a]
gi|111147309|emb|CAJ58957.1| serine/threonine protein phosphatase [Frankia alni ACN14a]
Length = 900
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 14/157 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV++VG GSGKSTF R++ + C+ D ++ + + L A L
Sbjct: 39 LVVLVGVSGSGKSTFARTHFRATEVISSDFCRGLVADDPNDQSATPEAFELLRYIAGKRL 98
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D N++ + R V L E DV A+VLD+P +C +R+ R + +
Sbjct: 99 AAGRLTVIDATNVQPDARRPLVALAR-EHDVLPVAIVLDVPEGVCAARNASRADRD---- 153
Query: 134 GGKAAAVVNRMLQKKELPKLS-EGFSRITLCQNENDV 169
G R ++ L LS EGF + L + E ++
Sbjct: 154 FGPHVLRRQRDQLRRGLRGLSREGFRTVHLLRGEGEI 190
>gi|119513582|ref|ZP_01632596.1| Metallophosphoesterase [Nodularia spumigena CCY9414]
gi|119461764|gb|EAW42787.1| Metallophosphoesterase [Nodularia spumigena CCY9414]
Length = 858
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 10/146 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTI-----NKGKSGTKVQCLTS-ASSAL 75
L++++GA GSGKSTF + + C+ + N+ + + L A L
Sbjct: 10 LIVLIGASGSGKSTFAHKHFQPFEVLSSDFCRGLVSNEENNQSATKDAFEVLHFIAQKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
GK +D N++ E R +++ A+VLDLP +LC R+ +R + + G
Sbjct: 70 AAGKLTVIDATNVQMEDRKPLLQMARQYHCFAIAIVLDLPEELCHERNQQRSDRQF---G 126
Query: 135 GKAAAVVNRMLQKKELPKLSEGFSRI 160
+ML++ EGF +
Sbjct: 127 SHVVRRHTQMLRRSLRGLEKEGFRYV 152
>gi|296102941|ref|YP_003613087.1| hypothetical protein ECL_02595 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|334351226|sp|D5CE05.1|YMDB_ENTCC RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|295057400|gb|ADF62138.1| hypothetical protein ECL_02595 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 180
Score = 43.5 bits (101), Expect = 0.34, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDIT ++ +VI NAAN L GGGGV+ AI AAGP L A ++ P
Sbjct: 10 GDITTMHV------DVIVNAANPSLM-GGGGVDGAIHRAAGPQLLEACKTVRQQQGECPP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI L G VIH +GP
Sbjct: 63 GHAVIT-------LAGDLPAKAVIHAVGP 84
>gi|29828865|ref|NP_823499.1| serine/threonine protein phosphatase [Streptomyces avermitilis
MA-4680]
gi|29605970|dbj|BAC70034.1| putative serine/threonine protein phosphatase [Streptomyces
avermitilis MA-4680]
Length = 848
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKSTF + + C+ D ++ S L A L
Sbjct: 19 LVVLIGASGSGKSTFARKHFTPTEIISSDFCRGLVADDENDQSASRDAFDVLHYIAGKRL 78
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
G+ +D ++++E R+ ++L +V A+VLD+P ++C R+ R +
Sbjct: 79 AAGRRTVVDATSVQQESRSQLIELARKHDVLPIAIVLDVPEEVCAERNAARTDR------ 132
Query: 135 GKAAAVVNRMLQK--KELPKL-----SEGFSRITLCQNENDVQAA 172
A + R++Q+ +EL + EGF ++ + + +++ A
Sbjct: 133 ---ADMPRRVIQRHTRELRRSLRHLEREGFRKVHVLRGVEEIENA 174
>gi|407644599|ref|YP_006808358.1| RNase III inhibitor [Nocardia brasiliensis ATCC 700358]
gi|407307483|gb|AFU01384.1| RNase III inhibitor [Nocardia brasiliensis ATCC 700358]
Length = 176
Score = 43.5 bits (101), Expect = 0.34, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE-RAKSLYPGN 408
GDITR + I NAAN L GGGGV+ AI +A GP + A E RA G
Sbjct: 16 GDITRQ------SVDAIVNAANSSLL-GGGGVDGAIHAAGGPEILAACRELRATRYRQGL 68
Query: 409 SVIVPLPSTSPLCGREGVTHVIHVLGPNMNP 439
V + +T+ GR VIH +GP +P
Sbjct: 69 PVGHAVATTA---GRLSARWVIHTVGPIWSP 96
>gi|365848966|ref|ZP_09389437.1| macro domain protein [Yokenella regensburgei ATCC 43003]
gi|364569610|gb|EHM47232.1| macro domain protein [Yokenella regensburgei ATCC 43003]
Length = 180
Score = 43.5 bits (101), Expect = 0.34, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDIT L +VI NAAN L GGGGV+ AI AAGPAL A ++ P
Sbjct: 10 GDITTL------AVDVIVNAANPSLL-GGGGVDGAIHHAAGPALLEACKVVRQQQGECPP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI + G VIH +GP
Sbjct: 63 GHAVIT-------VAGNLPAKAVIHTVGP 84
>gi|226467760|emb|CAX69756.1| Pre-mRNA-processing-splicing factor 8 [Schistosoma japonicum]
Length = 144
Score = 43.5 bits (101), Expect = 0.35, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVP---LPSTSPL 420
+ IANAAN +L+ GGGGV+ AI AAGP L VA ++ G++ + P LPS
Sbjct: 42 DAIANAANRQLR-GGGGVDGAIHRAAGPELLVA-CQKLGGCPTGDAKLTPGFNLPS---- 95
Query: 421 CGREGVTHVIHVLGP 435
+VIH +GP
Sbjct: 96 ------KYVIHCVGP 104
>gi|118591990|ref|ZP_01549384.1| hypothetical protein SIAM614_24977 [Stappia aggregata IAM 12614]
gi|118435286|gb|EAV41933.1| hypothetical protein SIAM614_24977 [Labrenzia aggregata IAM 12614]
Length = 173
Score = 43.5 bits (101), Expect = 0.35, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 44/92 (47%), Gaps = 21/92 (22%)
Query: 347 TFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYP 406
T +GDITRL + I NAAN L GGGG++ AI AAGP L +A
Sbjct: 6 THIGDITRL------AVDAIVNAANSSLL-GGGGIDRAIHRAAGPEL-LAECRTLNGCGT 57
Query: 407 GNSVIVP---LPSTSPLCGREGVTHVIHVLGP 435
GN+ I LP+ HVIH +GP
Sbjct: 58 GNAKITKGYRLPA----------RHVIHTVGP 79
>gi|302788716|ref|XP_002976127.1| hypothetical protein SELMODRAFT_16123 [Selaginella moellendorffii]
gi|300156403|gb|EFJ23032.1| hypothetical protein SELMODRAFT_16123 [Selaginella moellendorffii]
Length = 166
Score = 43.5 bits (101), Expect = 0.35, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 52/116 (44%), Gaps = 12/116 (10%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDITR + G + I NAAN L GGGGV+ AI AAGP L A + + P
Sbjct: 17 GDITRWFKDGH--SDAIVNAAN-ELMLGGGGVDGAIHDAAGPDLYKA-CKTLPLVAPRTR 72
Query: 410 VIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFE 465
V +P R V +IH +GP + +K +LR AY + E
Sbjct: 73 CPVGQARETP-AFRLPVRRIIHTVGPTYH-------RSTRMKAAALLRDAYCNSLE 120
>gi|434384413|ref|YP_007095024.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Chamaesiphon minutus PCC 6605]
gi|428015403|gb|AFY91497.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Chamaesiphon minutus PCC 6605]
Length = 179
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 46/104 (44%), Gaps = 20/104 (19%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPA-----LEVATAERAKSLYPGNSVIVPLPSTS 418
+ I NAAN +LK GGGGV+ AI AAG L + ER + G + I
Sbjct: 25 DAIVNAANTKLK-GGGGVDGAIHRAAGSTLLEECLALPIDERGQRCPTGEARITS----- 78
Query: 419 PLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTS 462
G +VIH +GP N + Y K +L KAY S
Sbjct: 79 --AGNLSAKYVIHTVGPFFNQKY-------YDKSVSLLEKAYLS 113
>gi|401676289|ref|ZP_10808275.1| YmdB Protein [Enterobacter sp. SST3]
gi|400216775|gb|EJO47675.1| YmdB Protein [Enterobacter sp. SST3]
Length = 180
Score = 43.5 bits (101), Expect = 0.35, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDIT ++ +VI NAAN L GGGGV+ AI AAGP L A ++ P
Sbjct: 10 GDITTMHV------DVIVNAANPSLM-GGGGVDGAIHRAAGPQLLEACKTVRQQQGECPP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI L G VIH +GP
Sbjct: 63 GHAVIT-------LAGDLPAKAVIHAVGP 84
>gi|392978515|ref|YP_006477103.1| hypothetical protein A3UG_08300 [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392324448|gb|AFM59401.1| hypothetical protein A3UG_08300 [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 180
Score = 43.5 bits (101), Expect = 0.35, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDIT ++ +VI NAAN L GGGGV+ AI AAGP L A ++ P
Sbjct: 10 GDITTMHV------DVIVNAANPSLM-GGGGVDGAIHRAAGPQLLEACKTVRQQQGECPP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI L G VIH +GP
Sbjct: 63 GHAVIT-------LAGDLPAKAVIHAVGP 84
>gi|261339348|ref|ZP_05967206.1| RNase III regulator YmdB [Enterobacter cancerogenus ATCC 35316]
gi|288318147|gb|EFC57085.1| RNase III regulator YmdB [Enterobacter cancerogenus ATCC 35316]
Length = 181
Score = 43.5 bits (101), Expect = 0.35, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 43/89 (48%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDIT L +VI NAAN L GGGGV+ AI AAGP L A ++ P
Sbjct: 10 GDITTLRV------DVIVNAANPSLM-GGGGVDGAIHRAAGPQLLEACKVVRQQQGECPP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI L G VIH +GP
Sbjct: 63 GHAVIT-------LAGDLNAKAVIHAVGP 84
>gi|288923636|ref|ZP_06417742.1| Appr-1-p processing domain protein [Frankia sp. EUN1f]
gi|288345017|gb|EFC79440.1| Appr-1-p processing domain protein [Frankia sp. EUN1f]
Length = 174
Score = 43.5 bits (101), Expect = 0.36, Method: Composition-based stats.
Identities = 37/94 (39%), Positives = 44/94 (46%), Gaps = 17/94 (18%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE-RAKSLYPGN 408
GDIT + I NAAN L GGGGV+ AI A GP + A RA +L G
Sbjct: 9 GDIT------SQAVDAIVNAANSSLL-GGGGVDGAIHRAGGPEILAACRRLRAGALPDG- 60
Query: 409 SVIVPLPS---TSPLCGREGVTHVIHVLGPNMNP 439
LP+ + GR HVIHV+GP P
Sbjct: 61 -----LPTGGAVATTAGRLAARHVIHVVGPVHAP 89
>gi|222054495|ref|YP_002536857.1| Appr-1-p processing protein [Geobacter daltonii FRC-32]
gi|221563784|gb|ACM19756.1| Appr-1-p processing domain protein [Geobacter daltonii FRC-32]
Length = 171
Score = 43.5 bits (101), Expect = 0.36, Method: Composition-based stats.
Identities = 46/120 (38%), Positives = 55/120 (45%), Gaps = 31/120 (25%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT L + I NAAN L GGGGV+ AI AAGP L VA G++
Sbjct: 9 GDITTL------AVDAIINAANNTLL-GGGGVDGAIHRAAGPEL-VAECSTLGGCETGDA 60
Query: 410 VIV---PLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKG-CEILRKAYTSLFE 465
I LP+ HVIH +GP + GD KG E+LR+AY FE
Sbjct: 61 KITKGYKLPA----------AHVIHTVGPVWH-------GGD--KGEPELLRRAYRRCFE 101
>gi|152985617|ref|YP_001346829.1| hypothetical protein PSPA7_1445 [Pseudomonas aeruginosa PA7]
gi|452878801|ref|ZP_21955974.1| hypothetical protein G039_19603 [Pseudomonas aeruginosa VRFPA01]
gi|150960775|gb|ABR82800.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
gi|452184569|gb|EME11587.1| hypothetical protein G039_19603 [Pseudomonas aeruginosa VRFPA01]
Length = 173
Score = 43.5 bits (101), Expect = 0.37, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 39/86 (45%), Gaps = 15/86 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDITRL + I NAAN L GGGGV+ AI AAGP L A G +
Sbjct: 9 GDITRL------AVDAIVNAANSSLL-GGGGVDGAIHRAAGPEL-AAACRLLHGCKTGAA 60
Query: 410 VIVPLPSTSPLCGREGVTHVIHVLGP 435
I P R HVIH +GP
Sbjct: 61 KITP-------GFRLSAAHVIHTVGP 79
>gi|124006268|ref|ZP_01691103.1| metallophosphoesterase [Microscilla marina ATCC 23134]
gi|123988192|gb|EAY27850.1| metallophosphoesterase [Microscilla marina ATCC 23134]
Length = 858
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 16/158 (10%)
Query: 22 LVIMVGAPGSGKST-----FCEHVMRSSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV++VGA GSGKST F ++ + SS A + + +K + L L
Sbjct: 10 LVLLVGASGSGKSTFARQHFAQYEVVSSDECRAMVSNNENSKDATNDAFDLLYYMVGKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
K+G +D N++ R V L V +VL+LP K+C +R+ R + + G
Sbjct: 70 KRGLLTVVDATNVQASSRKGLVVLAREYHVLPVVIVLELPQKVCEARNQARADRD---LG 126
Query: 135 GKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDV 169
G VV + LQ KK + L EGF +I ++ +V
Sbjct: 127 GH---VVRQQLQQLKKSIKGLKREGFRKIYRLKSPEEV 161
>gi|23099743|ref|NP_693209.1| hypothetical protein OB2288 [Oceanobacillus iheyensis HTE831]
gi|22777973|dbj|BAC14244.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 185
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 338 KH-INPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL--- 393
KH IN VGDIT+ T NVI NAAN L GGGGV+ AI AAGP L
Sbjct: 2 KHNINDNTLEIVVGDITKETT------NVIVNAANGSLL-GGGGVDGAIHHAAGPELLKA 54
Query: 394 --EVATAERAKSLYPGNSVIVP----LPSTSPLCGREGVTHVIHVLGPNMN 438
E+ E P VI+ LPS +IH +GP N
Sbjct: 55 CQEMRNNELNGEELPTGEVIITSGFQLPS----------RFIIHTVGPIWN 95
>gi|345452635|gb|AEN94525.1| non-structural polyprotein p200 [Rubella virus]
Length = 2116
Score = 43.5 bits (101), Expect = 0.38, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 14/101 (13%)
Query: 363 CNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCG 422
C V+ NAAN L G GV AIF+ A AL A R G +V P
Sbjct: 833 CKVVVNAANEGLL-AGSGVCGAIFANATSAL-AADCRRLAPCPTGEAVATPGHGC----- 885
Query: 423 REGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSL 463
G TH+IH + P PR P L+ +G +L +AY S+
Sbjct: 886 --GYTHIIHAVAPR-RPRDPAALE----EGEALLERAYRSI 919
>gi|154245828|ref|YP_001416786.1| appr-1-p processing domain-containing protein [Xanthobacter
autotrophicus Py2]
gi|154159913|gb|ABS67129.1| Appr-1-p processing domain protein [Xanthobacter autotrophicus Py2]
Length = 193
Score = 43.5 bits (101), Expect = 0.38, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 43/90 (47%), Gaps = 21/90 (23%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGN 408
VGDITRL + I NAAN L GGGGV+ AI AAGP L +A G
Sbjct: 26 VGDITRL------ALDAIVNAANSSLL-GGGGVDGAIHRAAGPEL-LAYCRTLGGCPTGE 77
Query: 409 SVIVP---LPSTSPLCGREGVTHVIHVLGP 435
+ + P LP+ HVIH +GP
Sbjct: 78 ARLTPGFRLPA----------AHVIHTVGP 97
>gi|330467416|ref|YP_004405159.1| appr-1-p processing domain-containing protein [Verrucosispora maris
AB-18-032]
gi|328810387|gb|AEB44559.1| appr-1-p processing domain-containing protein [Verrucosispora maris
AB-18-032]
Length = 162
Score = 43.5 bits (101), Expect = 0.38, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 42/87 (48%), Gaps = 13/87 (14%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGN 408
+GDITR + I AAN L GGGGV+ AI AAGP L A PGN
Sbjct: 1 MGDITREDV------DAIVTAANESLL-GGGGVDGAIHQAAGPRLARAGGAIGPC-EPGN 52
Query: 409 SVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ P +P V H+IH +GP
Sbjct: 53 AMATPAFDLNP-----PVRHIIHAVGP 74
>gi|340376789|ref|XP_003386914.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase-like
[Amphimedon queenslandica]
Length = 528
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 22/155 (14%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMR--SSARPWARICQDTINKGKSGTKVQCLTSASSALKK 77
Q +V+ VG P +GKS F + MR + R ++ + +D + G+ +C+T L
Sbjct: 361 QEIVVFVGPPAAGKSQFYKDYMRRERNKRHYSHVSRDLL-----GSWQKCVTECREGLVA 415
Query: 78 GKSVFLDRCNLEREQRTDFVKLG---GPEVDVHAVVLDLPAKL--------CISRSVKRI 126
G S +D + + E R +++LG G V + L L CI + +
Sbjct: 416 GYSAVIDNTSPDIESRGRYIQLGSQCGVPVRCFWFMTSLEHALHNNQYRNHCIKLKLYKD 475
Query: 127 EHEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRIT 161
+ + + + +R ++ P L+EGFS I
Sbjct: 476 DIKKMVPDSALRSYKSRFVE----PSLAEGFSEIV 506
>gi|366163212|ref|ZP_09462967.1| kinase-like protein [Acetivibrio cellulolyticus CD2]
Length = 297
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 17/148 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHV-------MRSSARPWARICQDTINKGKSGTKVQCLT-SASS 73
++MVG PGSGKST + + + SS + D N+ + Q L +
Sbjct: 4 FIMMVGLPGSGKSTLAKELALKENAALHSSDDLREELFGDANNQDNNELVFQELNRRINQ 63
Query: 74 ALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQ 133
L +GKSV D NL ++R + E +++ P + C+ H+ NL+
Sbjct: 64 DLSEGKSVVYDATNLSYKKRKLTLDRIKQECYKECILVATPYEKCL--------HQNNLR 115
Query: 134 GGKA-AAVVNRMLQKKELPKLSEGFSRI 160
K V+ +M + +P+ EG+ I
Sbjct: 116 SRKVPETVIEKMYKSFLVPQYYEGWDNI 143
>gi|220915977|ref|YP_002491281.1| Appr-1-p processing protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953831|gb|ACL64215.1| Appr-1-p processing domain protein [Anaeromyxobacter dehalogenans
2CP-1]
Length = 177
Score = 43.5 bits (101), Expect = 0.38, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 43/89 (48%), Gaps = 21/89 (23%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GD+TRL + I NAAN L GGGGV+ AI AAGP L A + + G +
Sbjct: 15 GDLTRLQV------DAIVNAANASLL-GGGGVDGAIHRAAGPELREACRALGGA-HTGEA 66
Query: 410 VIVP---LPSTSPLCGREGVTHVIHVLGP 435
I P LP+ HVIH +GP
Sbjct: 67 KITPGFRLPA----------RHVIHAVGP 85
>gi|169830525|ref|YP_001716507.1| appr-1-p processing domain-containing protein [Candidatus
Desulforudis audaxviator MP104C]
gi|169637369|gb|ACA58875.1| Appr-1-p processing domain protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 175
Score = 43.5 bits (101), Expect = 0.39, Method: Composition-based stats.
Identities = 39/97 (40%), Positives = 47/97 (48%), Gaps = 20/97 (20%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLY---P 406
GDITR + + NAAN L+PGGG V+ AI AAGP L AE + L P
Sbjct: 15 GDITRQEG-----FDAVVNAANAELRPGGG-VSGAIHRAAGPGL----AEECRPLAPIKP 64
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPN 443
G +VI S L R VIH LGP +P+
Sbjct: 65 GQAVIT---SAHKLPNR----FVIHCLGPVYGVDKPS 94
>gi|387889743|ref|YP_006320041.1| putative polyprotein [Escherichia blattae DSM 4481]
gi|414592979|ref|ZP_11442627.1| O-acetyl-ADP-ribose deacetylase YmdB [Escherichia blattae NBRC
105725]
gi|386924576|gb|AFJ47530.1| putative polyprotein [Escherichia blattae DSM 4481]
gi|403195812|dbj|GAB80279.1| O-acetyl-ADP-ribose deacetylase YmdB [Escherichia blattae NBRC
105725]
Length = 180
Score = 43.5 bits (101), Expect = 0.39, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 46/92 (50%), Gaps = 23/92 (25%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDITR+ +VI NAAN L GGGGV+ AI AAGPAL ++ P
Sbjct: 10 GDITRIPV------DVIVNAANPSLL-GGGGVDGAIHRAAGPALLAECKQIRQQQGECAP 62
Query: 407 GNSVIV---PLPSTSPLCGREGVTHVIHVLGP 435
G++VI LP+ + VIH +GP
Sbjct: 63 GHAVITGAGDLPARA----------VIHTVGP 84
>gi|255938812|ref|XP_002560176.1| Pc14g01820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584797|emb|CAP74323.1| Pc14g01820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 434
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 1 MDTDIDDTCKAKDEEKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGK 60
+ TD+++ AK +K LVI G+PG+GKSTF + + + R+ QD +
Sbjct: 258 VKTDLEEP--AKPFTRKHPLELVIFCGSPGAGKSTFYWNHLEPLG--YERVNQDILK--- 310
Query: 61 SGTKVQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLG 100
T+ +CL A L+ KSV +D N + E R + L
Sbjct: 311 --TRPKCLKVAREYLEAKKSVAVDNTNADPETRAHWTTLA 348
>gi|358449907|ref|ZP_09160381.1| appr-1-p processing domain-containing protein [Marinobacter
manganoxydans MnI7-9]
gi|357225750|gb|EHJ04241.1| appr-1-p processing domain-containing protein [Marinobacter
manganoxydans MnI7-9]
Length = 177
Score = 43.5 bits (101), Expect = 0.39, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 40/78 (51%), Gaps = 21/78 (26%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSL---YPGNSVIVP---LPST 417
+VI NAAN L PG G V AI SAAGP L AE ++L PG +VI LP+
Sbjct: 20 DVIVNAANAELLPGSG-VAGAIHSAAGPGL----AEECRALAPIRPGQAVISSAHELPN- 73
Query: 418 SPLCGREGVTHVIHVLGP 435
HVIH LGP
Sbjct: 74 ---------QHVIHCLGP 82
>gi|358373472|dbj|GAA90070.1| polynucleotide kinase- 3'-phosphatase [Aspergillus kawachii IFO
4308]
Length = 441
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 20/146 (13%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LVI G+PG+GKS+F + + R+ QD + C+ A L G+SV
Sbjct: 287 LVIFCGSPGAGKSSFYWEYLEPLK--YERVNQDLLK--------TCIKVAKEHLAAGRSV 336
Query: 82 FLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEG------NLQG 134
+D N + E R+ +V++ V + V LC + R ++ L
Sbjct: 337 VVDNTNADPETRSHWVEVAKEFNVPIRCVYFTASPALCRHNNAVRAANQTLNPESRTLLP 396
Query: 135 GKAAAVVNRMLQKKELPKLSEGFSRI 160
G A L++ + P ++EGF I
Sbjct: 397 GIA---FGDFLRRFKEPSMAEGFQDI 419
>gi|354569084|ref|ZP_08988243.1| Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) [Fischerella sp.
JSC-11]
gi|353539088|gb|EHC08584.1| Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) [Fischerella sp.
JSC-11]
Length = 869
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTSASSA-L 75
LV+++GA G+GKSTF + + + C+ D N+ + L ++ L
Sbjct: 10 LVVLIGASGAGKSTFAHRLFQPFEVLSSDFCRGLVSDDENNQFATKDAFDVLHFITTKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHEGN 131
GK +D NL+ E R FV+L H A+ L+LP ++C R+ +R N
Sbjct: 70 AAGKLTVIDATNLQPEDRKIFVQLAR---KYHFFPVAIALNLPEEVCHQRNQQR----PN 122
Query: 132 LQGGKAAAVVNRMLQKKELPKLS-EGFSRITL 162
Q G + + ++ L L EGF + +
Sbjct: 123 RQFGFHVVRRHTQMLRRSLRGLEREGFRYVYI 154
>gi|218885588|ref|YP_002434909.1| Appr-1-p processing protein [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218756542|gb|ACL07441.1| Appr-1-p processing domain protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 202
Score = 43.1 bits (100), Expect = 0.41, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 17/78 (21%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE---RAKSLYPGNSVIVP---LPST 417
+ + NAAN L+ GGGGV+ A+ AAGP L A + R L G +VI P LP+
Sbjct: 30 DAVVNAANAELR-GGGGVDGALHRAAGPMLLPAGRDIVARRGPLAAGEAVITPGFNLPA- 87
Query: 418 SPLCGREGVTHVIHVLGP 435
HVIH +GP
Sbjct: 88 ---------RHVIHAVGP 96
>gi|269797025|ref|YP_003316480.1| kinase [Sanguibacter keddieii DSM 10542]
gi|269099210|gb|ACZ23646.1| predicted kinase [Sanguibacter keddieii DSM 10542]
Length = 877
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 80/189 (42%), Gaps = 22/189 (11%)
Query: 22 LVIMVGAPGSGKSTF-CEHVMR----SSARPWARICQDTINKGKSGTKVQCL-TSASSAL 75
LV +VGA GSGKSTF EH R SS + D ++ + + L T L
Sbjct: 38 LVALVGASGSGKSTFAAEHFGRYEVVSSDMCRGLVSDDENDQSATADAFEVLGTIVGKRL 97
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
G+ +D N+ R+ R V+L +V A+VLD+P + + R+ R G+
Sbjct: 98 AAGRLTVVDATNVTRDARKAVVELARAHDVLPVAIVLDVPDAVSLERNRAR----GDRSF 153
Query: 135 GKAAAVVNRMLQKKELPKLS-EGFSRITLCQNENDVQAA--------LDTYSGLGPLDTL 185
G R ++ L L+ EGF + + + ++V D GP D +
Sbjct: 154 GDHVVRRQRDQLRRSLKGLAKEGFRAVHVLTSVDEVATVTVRRERLLTDHRDDHGPFDVV 213
Query: 186 P--HGSFGQ 192
HG G+
Sbjct: 214 GDVHGCLGE 222
>gi|194385510|dbj|BAG65132.1| unnamed protein product [Homo sapiens]
Length = 1560
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV---ATAERAKSLYP 406
GD+ RL +V+ NA+N LK GG+ AA+ AAGP L+ +R L P
Sbjct: 809 GDLARLPV------DVVVNASNEDLK-HYGGLAAALSKAAGPELQADCDQIVKREGRLLP 861
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRR-PNCL 445
GN+ I G+ HVIH +GP + P C+
Sbjct: 862 GNATISK-------AGKLPYHHVIHAVGPRWSGYEAPRCV 894
>gi|115523639|ref|YP_780550.1| appr-1-p processing domain-containing protein [Rhodopseudomonas
palustris BisA53]
gi|115517586|gb|ABJ05570.1| Appr-1-p processing domain protein [Rhodopseudomonas palustris
BisA53]
Length = 186
Score = 43.1 bits (100), Expect = 0.42, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 336 AQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV 395
+ +HI P + V DIT L + I NAAN L GGGGV+ AI AAGP L
Sbjct: 7 SSRHIGPVRLEVLVADITTLEV------DAIVNAANGSLL-GGGGVDGAIHRAAGPQLLA 59
Query: 396 ATA 398
A A
Sbjct: 60 ACA 62
>gi|354584986|ref|ZP_09003877.1| Appr-1-p processing domain protein [Paenibacillus lactis 154]
gi|353191103|gb|EHB56612.1| Appr-1-p processing domain protein [Paenibacillus lactis 154]
Length = 191
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 45/92 (48%), Gaps = 17/92 (18%)
Query: 347 TFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAK---S 403
+GDIT +TG ++I NAAN L GG GV+ AI SA GP + E K
Sbjct: 13 VIIGDIT-TWTG-----DIIVNAANSGLL-GGKGVDGAIHSAGGPEIMEQCMEIRKQQGG 65
Query: 404 LYPGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PGN+VI GR H+IH +GP
Sbjct: 66 CPPGNAVITG-------AGRLAAQHIIHTVGP 90
>gi|428219592|ref|YP_007104057.1| hypothetical protein Pse7367_3392 [Pseudanabaena sp. PCC 7367]
gi|427991374|gb|AFY71629.1| hypothetical protein Pse7367_3392 [Pseudanabaena sp. PCC 7367]
Length = 174
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 31/164 (18%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSS------ARPWARICQDTINK------------GKSGT 63
+++++G PGSGKST + +++S + P A + D I K K +
Sbjct: 4 VIVLIGIPGSGKSTLAKALLQSPQGLDRLSAP-ALVSPDRIRKKFYGSANAQGDWSKIWS 62
Query: 64 KVQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLGGPEVD---VHAVVLDLPAKLCIS 120
+V+C + A + + D N R+ R D ++L E + V + L +P C++
Sbjct: 63 QVRC--EFAQAATSQQFLIYDATNYRRKYRHDVIELAQ-EFNFSPVTGLWLQVPLWACLA 119
Query: 121 RSVKRIEHEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQ 164
R+ KR + +Q + N + +K PKL EGFSR+ +C+
Sbjct: 120 RNRKR---DRQVQEDVIKHMHNCL--QKNPPKLEEGFSRL-MCR 157
>gi|429219625|ref|YP_007181269.1| phosphatase, C-terminal domain of histone macro H2A1 like protein
[Deinococcus peraridilitoris DSM 19664]
gi|429130488|gb|AFZ67503.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Deinococcus peraridilitoris DSM 19664]
Length = 173
Score = 43.1 bits (100), Expect = 0.45, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT+ + + AAN RL GGGGV+ AI AAGP L R P S
Sbjct: 8 GDITQQRA------DALVTAANSRLA-GGGGVDGAIHRAAGPGL--LRYLRDIGHCPSGS 58
Query: 410 VIVPLPSTSPLCG--REGVTHVIHVLGP 435
++ SP G R+GV VIH +GP
Sbjct: 59 AVI-----SPAFGLARQGVRFVIHAVGP 81
>gi|359776618|ref|ZP_09279925.1| hypothetical protein ARGLB_047_01040 [Arthrobacter globiformis NBRC
12137]
gi|359306157|dbj|GAB13754.1| hypothetical protein ARGLB_047_01040 [Arthrobacter globiformis NBRC
12137]
Length = 176
Score = 43.1 bits (100), Expect = 0.46, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE-RAKSLYPGN 408
GDIT G + + NAAN L GGGGV+ AI AAGP L A E RA +L G
Sbjct: 8 GDIT------GRTVDAVVNAANSSLL-GGGGVDGAIHRAAGPELLEACRELRATTLRDG- 59
Query: 409 SVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPN 443
+ V +P G + VIH +GPN + + N
Sbjct: 60 -LPVGAAVATPGYGLQA-QWVIHTVGPNRHAGQTN 92
>gi|154813199|ref|NP_060024.2| poly [ADP-ribose] polymerase 14 [Homo sapiens]
gi|327478567|sp|Q460N5.3|PAR14_HUMAN RecName: Full=Poly [ADP-ribose] polymerase 14; Short=PARP-14;
AltName: Full=ADP-ribosyltransferase diphtheria
toxin-like 8; Short=ARTD8; AltName: Full=B aggressive
lymphoma protein 2
gi|225000148|gb|AAI72392.1| Poly (ADP-ribose) polymerase family, member 14 [synthetic
construct]
Length = 1801
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV---ATAERAKSLYP 406
GD+ RL +V+ NA+N LK GG+ AA+ AAGP L+ +R L P
Sbjct: 809 GDLARL------PVDVVVNASNEDLK-HYGGLAAALSKAAGPELQADCDQIVKREGRLLP 861
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRR-PNCL 445
GN+ I G+ HVIH +GP + P C+
Sbjct: 862 GNATISK-------AGKLPYHHVIHAVGPRWSGYEAPRCV 894
>gi|410866280|ref|YP_006980891.1| putative kinase [Propionibacterium acidipropionici ATCC 4875]
gi|410822921|gb|AFV89536.1| putative kinase [Propionibacterium acidipropionici ATCC 4875]
Length = 833
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 16/161 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++G GSGKSTF E + +C+ D ++ + L L
Sbjct: 11 LVVLIGISGSGKSTFAERAFGPFEAVSSDLCRGLVSGDATDQSATADAFDLLCYLVGKRL 70
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
+G +D N+ R+ RT V+L +V A+VLD+ ++ ++R+ R +
Sbjct: 71 DRGLLTVVDATNVTRQARTGMVRLARDHDVLPAAIVLDVGTEVAVARNAARPDRS----- 125
Query: 135 GKAAAVVNRMLQ--KKELPKL-SEGFSRITLCQNENDVQAA 172
A VV R ++ + +L EGF + + ++Q A
Sbjct: 126 -FGAGVVRRQAADLRQSIRRLKKEGFRSVHVLHGVEEIQDA 165
>gi|294667052|ref|ZP_06732278.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603144|gb|EFF46569.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 204
Score = 43.1 bits (100), Expect = 0.46, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 54/127 (42%), Gaps = 11/127 (8%)
Query: 318 LVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPG 377
+ D Q +L + R + + + GDIT+L +VI NAAN L G
Sbjct: 1 MADSVQIRSVLPITRPSCNSHNYRAMRIEVWQGDITQLDV------DVIVNAANESLL-G 53
Query: 378 GGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGRE-GVTHVIHVLGPN 436
GGGV+ AI AAGP L + E + PG V P G + H+ H +GP
Sbjct: 54 GGGVDGAIHRAAGPRL-LEACEALPQVRPG--VRCPTGEIRITDGFDLKARHIFHTVGPV 110
Query: 437 MNPRRPN 443
R N
Sbjct: 111 WRDGRHN 117
>gi|149924649|ref|ZP_01913001.1| hypothetical protein PPSIR1_17920 [Plesiocystis pacifica SIR-1]
gi|149814468|gb|EDM74057.1| hypothetical protein PPSIR1_17920 [Plesiocystis pacifica SIR-1]
Length = 173
Score = 43.1 bits (100), Expect = 0.46, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 14/88 (15%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDITR+ C+ I NAAN ++ GGGGV+ AI AAGP L +A R + N
Sbjct: 10 GDITRV------SCDAIVNAANPKML-GGGGVDGAIHRAAGPEL-LAACRRVPKV---NG 58
Query: 410 VIVPL--PSTSPLCGREGVTHVIHVLGP 435
+ P +P G + VIH +GP
Sbjct: 59 IRCPFGEARITPAFGLDA-RWVIHAVGP 85
>gi|67078850|gb|AAY64449.1| B-aggressive lymphoma 2B [Homo sapiens]
Length = 1638
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV---ATAERAKSLYP 406
GD+ RL +V+ NA+N LK GG+ AA+ AAGP L+ +R L P
Sbjct: 646 GDLARL------PVDVVVNASNEDLK-HYGGLAAALSKAAGPELQADCDQIVKREGRLLP 698
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRR-PNCL 445
GN+ I G+ HVIH +GP + P C+
Sbjct: 699 GNATISK-------AGKLPYHHVIHAVGPRWSGYEAPRCV 731
>gi|67078852|gb|AAY64450.1| B-aggressive lymphoma 2A [Homo sapiens]
Length = 1517
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV---ATAERAKSLYP 406
GD+ RL +V+ NA+N LK GG+ AA+ AAGP L+ +R L P
Sbjct: 646 GDLARLPV------DVVVNASNEDLK-HYGGLAAALSKAAGPELQADCDQIVKREGRLLP 698
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRR-PNCL 445
GN+ I G+ HVIH +GP + P C+
Sbjct: 699 GNATISK-------AGKLPYHHVIHAVGPRWSGYEAPRCV 731
>gi|56459216|ref|YP_154497.1| phosphatase [Idiomarina loihiensis L2TR]
gi|56178226|gb|AAV80948.1| Predicted phosphatase [Idiomarina loihiensis L2TR]
Length = 167
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 41/81 (50%), Gaps = 15/81 (18%)
Query: 366 IANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVP---LPSTSPLCG 422
I NAAN +L+ GGG V AI AAGP LE AT A + PG +VI LP+
Sbjct: 19 IVNAANAKLQTGGG-VAGAIHRAAGPELEKATRSLA-PIKPGEAVITEAFDLPN------ 70
Query: 423 REGVTHVIHVLGPNMNPRRPN 443
+VIH LGP P+
Sbjct: 71 ----KYVIHCLGPVYGSDEPS 87
>gi|302526878|ref|ZP_07279220.1| serine/threonine protein phosphatase [Streptomyces sp. AA4]
gi|302435773|gb|EFL07589.1| serine/threonine protein phosphatase [Streptomyces sp. AA4]
Length = 851
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTIN---KGKSGTK--VQCLTS-ASSAL 75
LV++VGA GSGKSTF R + + C+ ++ +S TK L L
Sbjct: 11 LVVLVGASGSGKSTFGRTHFRPTEVISSDFCRGLVSDDENDQSATKDAFDVLHYIVGKRL 70
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKR 125
G+ +D N++ + R V L E DV A+VLD P LC++R+ +R
Sbjct: 71 AAGRLTVVDATNVQPDSRKSLVAL-AREHDVLPVAIVLDPPESLCVARNAER 121
>gi|159900563|ref|YP_001546810.1| hypothetical protein Haur_4050 [Herpetosiphon aurantiacus DSM 785]
gi|159893602|gb|ABX06682.1| conserved hypothetical protein [Herpetosiphon aurantiacus DSM 785]
Length = 150
Score = 43.1 bits (100), Expect = 0.47, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 20/141 (14%)
Query: 24 IMVGAPGSGKSTF-CEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSVF 82
+++G SGKSTF + + S R IN T+ + T + L+ +S
Sbjct: 7 LLIGLQASGKSTFYVQQFLHSHVR---------INLDMLRTQHREQTLIACCLELRQSFV 57
Query: 83 LDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRI--EHEGNLQGGKAAA 139
+DR NLER +R+ +++ + +L+ C+ R+ +R +H L
Sbjct: 58 IDRMNLERNRRSGYIQAAQAAGFRIEGYLLESNLAACLERNRQRTGKQHIPEL------- 110
Query: 140 VVNRMLQKKELPKLSEGFSRI 160
+ +K ELP L+EGF R+
Sbjct: 111 AIRGSFKKLELPSLAEGFERL 131
>gi|119599873|gb|EAW79467.1| poly (ADP-ribose) polymerase family, member 14, isoform CRA_a [Homo
sapiens]
gi|119599875|gb|EAW79469.1| poly (ADP-ribose) polymerase family, member 14, isoform CRA_a [Homo
sapiens]
Length = 1424
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV---ATAERAKSLYP 406
GD+ RL +V+ NA+N LK GG+ AA+ AAGP L+ +R L P
Sbjct: 526 GDLARLPV------DVVVNASNEDLK-HYGGLAAALSKAAGPELQADCDQIVKREGRLLP 578
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRR-PNCL 445
GN+ I G+ HVIH +GP + P C+
Sbjct: 579 GNATISK-------AGKLPYHHVIHAVGPRWSGYEAPRCV 611
>gi|395733238|ref|XP_002813272.2| PREDICTED: poly [ADP-ribose] polymerase 14 [Pongo abelii]
Length = 1518
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV---ATAERAKSLYP 406
GD+ RL +V+ NA+N LK GG+ AA+ AAGP L+ +R L P
Sbjct: 526 GDLARL------PVDVVVNASNEDLK-HYGGLAAALSKAAGPELQADCDQIVKREGRLLP 578
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRR-PNCL 445
GN+ I G+ HVIH +GP + P C+
Sbjct: 579 GNATISK-------AGKLPYHHVIHAVGPRWSGYEAPRCV 611
>gi|334122515|ref|ZP_08496553.1| RNase III regulator YmdB [Enterobacter hormaechei ATCC 49162]
gi|333392122|gb|EGK63229.1| RNase III regulator YmdB [Enterobacter hormaechei ATCC 49162]
Length = 178
Score = 43.1 bits (100), Expect = 0.48, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDIT ++ +VI NAAN L GGGGV+ AI AAGP L A ++ P
Sbjct: 10 GDITTVHV------DVIVNAANSSLL-GGGGVDGAIHRAAGPQLLEACKTVRQQQGECPP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI L G VIH +GP
Sbjct: 63 GHAVIT-------LAGDLPAKAVIHTVGP 84
>gi|197121273|ref|YP_002133224.1| Appr-1-p processing protein [Anaeromyxobacter sp. K]
gi|196171122|gb|ACG72095.1| Appr-1-p processing domain protein [Anaeromyxobacter sp. K]
Length = 177
Score = 43.1 bits (100), Expect = 0.48, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 45/90 (50%), Gaps = 23/90 (25%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERA-KSLYPGN 408
GD+TRL + I NAAN L GGGGV+ AI AAGP E+ A RA + G
Sbjct: 15 GDLTRLQV------DAIVNAANASLL-GGGGVDGAIHRAAGP--ELLEACRALGGAHTGE 65
Query: 409 SVIVP---LPSTSPLCGREGVTHVIHVLGP 435
+ I P LP+ HVIH +GP
Sbjct: 66 AKITPGFRLPA----------RHVIHAVGP 85
>gi|83815204|ref|YP_444690.1| Appr-1-p processing enzyme family protein [Salinibacter ruber DSM
13855]
gi|83756598|gb|ABC44711.1| Appr-1-p processing enzyme family protein [Salinibacter ruber DSM
13855]
Length = 178
Score = 43.1 bits (100), Expect = 0.48, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 366 IANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIV---PLPSTSPLCG 422
+ NAAN +L+ GGGV A+ SAAGP L T A + PG +VI LP+
Sbjct: 23 VVNAANAQLR-SGGGVAGALHSAAGPGLATETRPMA-PIEPGEAVISGAHDLPN------ 74
Query: 423 REGVTHVIHVLGP 435
HVIHVLGP
Sbjct: 75 ----DHVIHVLGP 83
>gi|23092530|gb|AAN08627.1| unknown [Homo sapiens]
Length = 1518
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV---ATAERAKSLYP 406
GD+ RL +V+ NA+N LK GG+ AA+ AAGP L+ +R L P
Sbjct: 526 GDLARL------PVDVVVNASNEDLK-HYGGLAAALSKAAGPELQADCDQIVKREGRLLP 578
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRR-PNCL 445
GN+ I G+ HVIH +GP + P C+
Sbjct: 579 GNATISK-------AGKLPYHHVIHAVGPRWSGYEAPRCV 611
>gi|363421922|ref|ZP_09310004.1| appr-1-p processing enzyme [Rhodococcus pyridinivorans AK37]
gi|359733823|gb|EHK82812.1| appr-1-p processing enzyme [Rhodococcus pyridinivorans AK37]
Length = 176
Score = 43.1 bits (100), Expect = 0.49, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE-RAKSLYPGN 408
GDIT + + I NAAN L GGGGV+ AI A GP + A E RA SL G
Sbjct: 9 GDITTI------AVDAIVNAANSSLL-GGGGVDGAIHRAGGPEILAACRELRATSLPDG- 60
Query: 409 SVIVPLPSTSPLCGREGVTHVIHVLGP 435
+ P + + GR VIH +GP
Sbjct: 61 --LEPGRAVATTAGRLPARWVIHTVGP 85
>gi|119599876|gb|EAW79470.1| poly (ADP-ribose) polymerase family, member 14, isoform CRA_c [Homo
sapiens]
Length = 1518
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV---ATAERAKSLYP 406
GD+ RL +V+ NA+N LK GG+ AA+ AAGP L+ +R L P
Sbjct: 526 GDLARL------PVDVVVNASNEDLK-HYGGLAAALSKAAGPELQADCDQIVKREGRLLP 578
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRR-PNCL 445
GN+ I G+ HVIH +GP + P C+
Sbjct: 579 GNATISK-------AGKLPYHHVIHAVGPRWSGYEAPRCV 611
>gi|350855012|emb|CAZ36046.2| polynucleotide kinase-3'-phosphatase, putative [Schistosoma
mansoni]
Length = 662
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 30/142 (21%)
Query: 27 GAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSVFLDRC 86
G P SGK R C D ++ GT +C+ + A+ K V +D
Sbjct: 182 GRPASGK------------RKKDHSCADRLDN--VGTWQKCVQAVEQAISKSLPVVVDNT 227
Query: 87 NLEREQRTDFVKLGGPEVDVHAVVLDLPAK-LCISRSVKRIEHEGNLQGGKAAA------ 139
N++ E RT ++K+ A V D+P K + S++ +H + ++
Sbjct: 228 NMDLESRTRYIKI--------AKVWDIPVKCFIMETSMEHAQHNERFRALTNSSHKQISQ 279
Query: 140 -VVNRMLQKKELPKLSEGFSRI 160
V N M K E P + EG+ I
Sbjct: 280 MVYNMMKSKYEKPTMEEGYQEI 301
>gi|381156454|ref|ZP_09865693.1| polynucleotide kinase-phosphatase [Thiorhodovibrio sp. 970]
gi|380881791|gb|EIC23876.1| polynucleotide kinase-phosphatase [Thiorhodovibrio sp. 970]
Length = 849
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 36/194 (18%)
Query: 22 LVIMVGAPGSGKSTFCEHVMR-------SSARPWARICQDTINKGKSGTKVQCLTS-ASS 73
L+++VGA GSGKSTF R + R W + D ++ + + L A+
Sbjct: 10 LIMLVGASGSGKSTFARRHFRPTEVLSSDTCRGW--VSDDETDQSATKDAFEVLHFIAAK 67
Query: 74 ALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHE 129
L + +D N++ + R + L H A+VLDLP LC R+ R + +
Sbjct: 68 RLAARRLTVIDATNVQPDARKSLLALAR---RWHCLPVAIVLDLPPALCHGRNQARADRQ 124
Query: 130 GNLQGGKAAAVVNRMLQ--KKELPKL-SEGFSRITLCQNENDVQAAL--------DTYSG 178
+ VV R K+ L L EGF +I + ++A D +
Sbjct: 125 FG------SEVVRRQADQLKRSLRSLKKEGFRQIVRLDSPEAIEAVRIERQPLWNDRRAD 178
Query: 179 LGPLDTL--PHGSF 190
GP D + HG F
Sbjct: 179 TGPFDLIGDVHGCF 192
>gi|260906078|ref|ZP_05914400.1| predicted phosphatase, C-terminal domain of histone macro H2A1 like
protein [Brevibacterium linens BL2]
Length = 177
Score = 43.1 bits (100), Expect = 0.51, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 344 KFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKS 403
K GDIT + I NAAN L GGGGV+ AI AAGP L A E ++
Sbjct: 2 KITVLEGDITEA------SVDAIVNAANSSLL-GGGGVDGAIHKAAGPELLEACREIRQT 54
Query: 404 LYPGNSVIVPLPSTSPLCGREG---VTHVIHVLGPN 436
+P LP+ + G T VIH +GPN
Sbjct: 55 SHPRG-----LPAGQAVATSAGALKATWVIHTVGPN 85
>gi|326429377|gb|EGD74947.1| hypothetical protein PTSG_12542 [Salpingoeca sp. ATCC 50818]
Length = 418
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 16/144 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
++++VG+P SGKSTF E ++ P + +N+ GT +C +A+ AL+ G+SV
Sbjct: 259 MIVLVGSPASGKSTFAERHLK----PHGYVI---VNRDTLGTMAKCEKAAAKALEDGQSV 311
Query: 82 FLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAV 140
+D N + R F+++ V V V L P + + R L GK +
Sbjct: 312 VVDNTNPDPASRAKFIQIATKHSVPVRCVELTTPRDVASHLNYFR----AILTDGKRRRI 367
Query: 141 ----VNRMLQKKELPKLSEGFSRI 160
N K + P EGF +
Sbjct: 368 PDVAFNSFRSKYKAPSAGEGFDEV 391
>gi|365899813|ref|ZP_09437697.1| putative Protein serine-threonine phosphatase [Bradyrhizobium sp.
STM 3843]
gi|365419440|emb|CCE10239.1| putative Protein serine-threonine phosphatase [Bradyrhizobium sp.
STM 3843]
Length = 853
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 24/182 (13%)
Query: 22 LVIMVGAPGSGKSTF-CEHVMR----SSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV+++G+ GSGKSTF +H + SS A + D ++G S + + A L
Sbjct: 10 LVVLIGSTGSGKSTFAAKHFLPTEIISSDHCRALVADDETDQGVSADAFELVREIAGKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH-AVVLDLPAKLCISRSVKRIEHEGNLQG 134
K K +D N+ R +V+L + A+V D +CI+R+ R E G
Sbjct: 70 KHRKLAVIDATNVRPADRKGWVELARKWHALPVAIVFDPGIDICIARNKTRPERA---FG 126
Query: 135 GKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAA--------LDTYSGLGPLD 183
G VV RM+ ++ L L EGF ++ + + ++AA D S GP D
Sbjct: 127 GP---VVQRMVSEIRRGLGGLQREGFRQVWKLSSVDSIEAASVTRQPLWTDKRSDSGPFD 183
Query: 184 TL 185
+
Sbjct: 184 II 185
>gi|302891605|ref|XP_003044684.1| hypothetical protein NECHADRAFT_81503 [Nectria haematococca mpVI
77-13-4]
gi|256725609|gb|EEU38971.1| hypothetical protein NECHADRAFT_81503 [Nectria haematococca mpVI
77-13-4]
Length = 221
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 52/106 (49%), Gaps = 22/106 (20%)
Query: 333 AKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPA 392
A +A IN ++ GDITRL + I NAAN RL GGGGV+ AI +AAGP
Sbjct: 35 AFSASDDIN-RRIGYMRGDITRLR------LDAIVNAAN-RLLQGGGGVDGAINAAAGPE 86
Query: 393 LEVATAERAKSLYPGNSVIVP---LPSTSPLCGREGVTHVIHVLGP 435
L V + + G +VI LP+ HVIH +GP
Sbjct: 87 L-VRESAPLGPIETGEAVITKGYNLPA----------QHVIHTVGP 121
>gi|6331213|dbj|BAA86582.1| KIAA1268 protein [Homo sapiens]
Length = 1023
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV---ATAERAKSLYP 406
GD+ RL +V+ NA+N LK GG+ AA+ AAGP L+ +R L P
Sbjct: 152 GDLARLPV------DVVVNASNEDLK-HYGGLAAALSKAAGPELQADCDQIVKREGRLLP 204
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRR-PNCL 445
GN+ I G+ HVIH +GP + P C+
Sbjct: 205 GNATISK-------AGKLPYHHVIHAVGPRWSGYEAPRCV 237
>gi|429328770|gb|AFZ80530.1| polynucleotide kinase- 3'-phosphatase, putative [Babesia equi]
Length = 448
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
L+I+VG P SGK+ FC ++ + + RI D T C + LK GK+V
Sbjct: 284 LIIIVGPPSSGKTFFCANLFPN----FVRITPDDF-----PTLEACNKEIAKILKTGKNV 334
Query: 82 FLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIE 127
+D N + R F+K G G V V V +++ KL V +++
Sbjct: 335 IIDGTNHLYKIRASFIKTGKGAGVTVSLVYINV--KLPFPTHVNKLK 379
>gi|414145765|pdb|4GP6|A Chain A, Polynucleotide Kinase
gi|414145766|pdb|4GP6|B Chain B, Polynucleotide Kinase
Length = 171
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++G+ GSGKSTF + + + + C+ D ++ +G L S L
Sbjct: 11 LVVLIGSSGSGKSTFAKKHFKPTEVISSDFCRGLVSDDENDQTVTGAAFDVLHYIVSKRL 70
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHE 129
+ GK +D N++ R +++ D H AVV +LP K+C R+ R + +
Sbjct: 71 QLGKLTVVDATNVQESARKPLIEIAK---DYHCFPVAVVFNLPEKVCQERNKNRTDRQ 125
>gi|198415991|ref|XP_002127397.1| PREDICTED: similar to polynucleotide kinase 3- phosphatase [Ciona
intestinalis]
Length = 547
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Query: 19 KQILVIMVGAPGSGKSTFC-EHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKK 77
+Q ++I+VG P GKSTF +H++ + + +I +DT+ T +C+ + SAL
Sbjct: 390 QQEVLILVGYPACGKSTFTRQHLV---PKGYVQINRDTLK-----TWQKCVAACKSALAS 441
Query: 78 GKSVFLDRCNLEREQRTDFV 97
GKSV +D N + E R ++
Sbjct: 442 GKSVAIDNTNPDIESRKRYI 461
>gi|56756276|gb|AAW26313.1| SJCHGC06209 protein [Schistosoma japonicum]
Length = 194
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 21/89 (23%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT L + IANAAN +L+ GGGGV+ AI AAGP L VA ++ G++
Sbjct: 34 GDITHLRI------DAIANAANRQLR-GGGGVDGAIHRAAGPELLVA-CQKLGGCPTGDA 85
Query: 410 VIVP---LPSTSPLCGREGVTHVIHVLGP 435
+ P LPS +VIH +GP
Sbjct: 86 KLTPGFNLPS----------KYVIHCVGP 104
>gi|336249725|ref|YP_004593435.1| RNase III inhibitor [Enterobacter aerogenes KCTC 2190]
gi|334735781|gb|AEG98156.1| RNase III inhibitor [Enterobacter aerogenes KCTC 2190]
Length = 174
Score = 42.7 bits (99), Expect = 0.56, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 44/90 (48%), Gaps = 17/90 (18%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLY 405
+GDIT L +VI NAAN L GGGGV+ AI AAGP L A ++
Sbjct: 9 LGDITTLQV------DVIVNAANPSLL-GGGGVDGAIHRAAGPELLAACKIVRQQQGECP 61
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PG++VI G + VIH +GP
Sbjct: 62 PGHAVITS-------AGNLPASAVIHAVGP 84
>gi|237730978|ref|ZP_04561459.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226906517|gb|EEH92435.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 180
Score = 42.7 bits (99), Expect = 0.56, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE--RAKSLYPG 407
GDIT + +VI NAAN L GGGGV+ AI AAGPAL A + + + P
Sbjct: 10 GDITTI------AVDVIVNAANSSLL-GGGGVDGAIHRAAGPALSEACKQVIQQQGECPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P VIH +GP
Sbjct: 63 GHAVITLAGALP------AKAVIHTVGP 84
>gi|254525015|ref|ZP_05137070.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14]
gi|219722606|gb|EED41131.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14]
Length = 199
Score = 42.7 bits (99), Expect = 0.56, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT L + I NAAN L GGGGV+ AI AAGPAL +A E+ L PG
Sbjct: 8 GDITTL------AVDAIVNAANETLL-GGGGVDGAIHRAAGPAL-LAECEQLPELRPG-- 57
Query: 410 VIVPLPSTSPLCGRE-GVTHVIHVLGP 435
V P HV+H +GP
Sbjct: 58 VRCPTGEVRATGAYALPARHVLHTVGP 84
>gi|294506448|ref|YP_003570506.1| Appr-1-p processing enzyme family protein [Salinibacter ruber M8]
gi|294342776|emb|CBH23554.1| Appr-1-p processing enzyme family protein [Salinibacter ruber M8]
Length = 181
Score = 42.7 bits (99), Expect = 0.56, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 366 IANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIV---PLPSTSPLCG 422
+ NAAN +L+ GGG V A+ SAAGP L T A + PG +VI LP+
Sbjct: 26 VVNAANAQLRTGGG-VAGALHSAAGPGLATETRPMA-PIEPGEAVISGAHDLPN------ 77
Query: 423 REGVTHVIHVLGP 435
HVIHVLGP
Sbjct: 78 ----DHVIHVLGP 86
>gi|116624047|ref|YP_826203.1| appr-1-p processing domain-containing protein [Candidatus
Solibacter usitatus Ellin6076]
gi|116227209|gb|ABJ85918.1| Appr-1-p processing domain protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 178
Score = 42.7 bits (99), Expect = 0.57, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 343 KKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPA-LEVATAERA 401
KK GDITR+ +V+ANAAN L GGGGV+ AI A GPA + A RA
Sbjct: 9 KKIVLIRGDITRI------AVDVMANAANSALA-GGGGVDGAIHRAGGPAIMRELDAIRA 61
Query: 402 KS-LYPGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
+S P S + + P +V H +GP
Sbjct: 62 RSGGCPTGSAVATSAGSLP------ARYVFHAVGP 90
>gi|444352073|ref|YP_007388217.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Enterobacter aerogenes EA1509E]
gi|443902903|emb|CCG30677.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Enterobacter aerogenes EA1509E]
Length = 174
Score = 42.7 bits (99), Expect = 0.58, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 44/90 (48%), Gaps = 17/90 (18%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLY 405
+GDIT L +VI NAAN L GGGGV+ AI AAGP L A ++
Sbjct: 9 LGDITTLQV------DVIVNAANPSLL-GGGGVDGAIHRAAGPELLAACKIVRQQQGECP 61
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PG++VI G + VIH +GP
Sbjct: 62 PGHAVITS-------AGNLPASAVIHAVGP 84
>gi|20807168|ref|NP_622339.1| hypothetical protein TTE0679 [Thermoanaerobacter tengcongensis MB4]
gi|20515667|gb|AAM23943.1| hypothetical protein TTE0679 [Thermoanaerobacter tengcongensis MB4]
Length = 183
Score = 42.7 bits (99), Expect = 0.58, Method: Composition-based stats.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARP-WARICQDTINKGKSG------TKVQCLTSASSA 74
LV++VG PG+GKSTF + + RP + D + K G + Q + SA
Sbjct: 4 LVLLVGLPGAGKSTFAAELKKK--RPDIVVVSSDEVRKYFFGVVFEPKVEKQVWSIVHSA 61
Query: 75 ----LKKGKSVFLDRCNLEREQRTDFVKLGG-PEVDVHAVVLDLPAKLCISRSVKRIEHE 129
LK GK+V LD NL R R +V+ G + V AV ++ P + ++ R
Sbjct: 62 VIGNLKLGKTVVLDATNLTRRSRYKWVRWAGWFKKPVLAVFINPPLETVFKQNAMR---- 117
Query: 130 GNLQGGKAAAVVNRMLQKK----ELPKLSEGFSRI 160
K V ++KK ++P++ EGF +
Sbjct: 118 -----EKEWVVPEEEMRKKVMILKVPQMEEGFYSV 147
>gi|399053943|ref|ZP_10742673.1| putative kinase [Brevibacillus sp. CF112]
gi|398048225|gb|EJL40707.1| putative kinase [Brevibacillus sp. CF112]
Length = 319
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 16/151 (10%)
Query: 22 LVIMVGAPGSGKSTFCEH-------VMRSSARPWARICQDTINKGKSGTKVQCLTS-ASS 73
L++MVG PGSGK+ E V+ S+ + D + K+ Q + +
Sbjct: 4 LIMMVGIPGSGKTRAAEQIAKKERAVLVSTDAVRLELFGDEAKRRKNPLVFQAVYARIGQ 63
Query: 74 ALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQ 133
A G V D N++R++R ++ P + L+ P +C+ R+ R +
Sbjct: 64 AFAAGSDVVFDATNVDRDKRIAVLERFAPAI-AECYYLNTPFDVCLQRNQAR-------K 115
Query: 134 GGKAAAVVNRMLQKKELPKLSEGFSRITLCQ 164
A+V+ + + P EGFS + L
Sbjct: 116 RKLDASVLEKYRKNLHFPLHREGFSTVHLVH 146
>gi|227893964|ref|ZP_04011769.1| Appr-1-p processing domain protein [Lactobacillus ultunensis DSM
16047]
gi|227864213|gb|EEJ71634.1| Appr-1-p processing domain protein [Lactobacillus ultunensis DSM
16047]
Length = 167
Score = 42.7 bits (99), Expect = 0.58, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 22/106 (20%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLY--PG 407
GDIT++ + I NAAN L GGGGV+ AI +AAGP L E +L+ P
Sbjct: 9 GDITKMKA------DAIVNAANNSLL-GGGGVDGAIHAAAGPHL----LEECMTLHGCPT 57
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGC 453
+ L P HVIH +GP + + +C D ++ C
Sbjct: 58 GDAKITLGYDLP------AKHVIHTVGPVYSGKSSDC---DMLRAC 94
>gi|410463320|ref|ZP_11316845.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Desulfovibrio magneticus str. Maddingley MBC34]
gi|409983566|gb|EKO39930.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Desulfovibrio magneticus str. Maddingley MBC34]
Length = 188
Score = 42.7 bits (99), Expect = 0.59, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 39/78 (50%), Gaps = 17/78 (21%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE---RAKSLYPGNSVIVP---LPST 417
+ I NAAN L GGGGV+ AI AAGP L A + R SL G +VI LP+
Sbjct: 27 DAIVNAANSALA-GGGGVDGAIHRAAGPKLPAACRDIIARIGSLPAGGAVITAGFELPA- 84
Query: 418 SPLCGREGVTHVIHVLGP 435
H+IH +GP
Sbjct: 85 ---------RHIIHTVGP 93
>gi|194366983|ref|YP_002029593.1| hypothetical protein Smal_3211 [Stenotrophomonas maltophilia
R551-3]
gi|194349787|gb|ACF52910.1| Appr-1-p processing domain protein [Stenotrophomonas maltophilia
R551-3]
Length = 199
Score = 42.7 bits (99), Expect = 0.60, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT L + I NAAN L GGGGV+ AI AAGPAL +A E+ L PG
Sbjct: 8 GDITTL------AVDAIVNAANETLL-GGGGVDGAIHRAAGPAL-LAECEQLPELRPG-- 57
Query: 410 VIVPLPSTSPLCGRE-GVTHVIHVLGP 435
V P HV+H +GP
Sbjct: 58 VRCPTGEVRATDAHALPARHVLHTVGP 84
>gi|374295176|ref|YP_005045367.1| polynucleotide 3'-phosphatase,polynucleotide
5'-hydroxyl-kinase,polynucleotide 2',3'-cyclic phosphate
phosphodiesterase [Clostridium clariflavum DSM 19732]
gi|359824670|gb|AEV67443.1| polynucleotide 3'-phosphatase,polynucleotide
5'-hydroxyl-kinase,polynucleotide 2',3'-cyclic phosphate
phosphodiesterase [Clostridium clariflavum DSM 19732]
Length = 870
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 13/118 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
L++++G+ GSGKSTF + + + + C+ D ++ + T + L S L
Sbjct: 10 LIVLIGSSGSGKSTFAKKHFKPTEVISSDFCRGLVSDDENDQTVTDTAFEVLHYIVSKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHE 129
+ GK +D N++ R +++ D H AVV +LP K+C R+ R + +
Sbjct: 70 QLGKLTVVDATNVQESARKPLIQIAK---DYHCFPVAVVFNLPEKVCRERNKNRTDRQ 124
>gi|218704453|ref|YP_002411972.1| hypothetical protein ECUMN_1219 [Escherichia coli UMN026]
gi|293404333|ref|ZP_06648327.1| hypothetical protein ECGG_02724 [Escherichia coli FVEC1412]
gi|298380111|ref|ZP_06989716.1| ymdB protein [Escherichia coli FVEC1302]
gi|300899560|ref|ZP_07117799.1| RNase III regulator YmdB [Escherichia coli MS 198-1]
gi|331662447|ref|ZP_08363370.1| RNase III regulator YmdB [Escherichia coli TA143]
gi|387606569|ref|YP_006095425.1| putative DNA and/or RNA unwinding protein [Escherichia coli 042]
gi|417585970|ref|ZP_12236743.1| macro domain protein [Escherichia coli STEC_C165-02]
gi|419936010|ref|ZP_14453050.1| hypothetical protein EC5761_19542 [Escherichia coli 576-1]
gi|422332151|ref|ZP_16413165.1| UPF0189 protein ymdB [Escherichia coli 4_1_47FAA]
gi|432352989|ref|ZP_19596272.1| hypothetical protein WCA_01969 [Escherichia coli KTE2]
gi|432401220|ref|ZP_19643974.1| hypothetical protein WEK_01400 [Escherichia coli KTE26]
gi|432425276|ref|ZP_19667791.1| hypothetical protein A139_00668 [Escherichia coli KTE181]
gi|432460048|ref|ZP_19702204.1| hypothetical protein A15I_00917 [Escherichia coli KTE204]
gi|432475138|ref|ZP_19717144.1| hypothetical protein A15Q_01325 [Escherichia coli KTE208]
gi|432488745|ref|ZP_19730629.1| hypothetical protein A171_00662 [Escherichia coli KTE213]
gi|432521718|ref|ZP_19758873.1| hypothetical protein A17U_04722 [Escherichia coli KTE228]
gi|432537086|ref|ZP_19774003.1| hypothetical protein A195_00711 [Escherichia coli KTE235]
gi|432630645|ref|ZP_19866589.1| hypothetical protein A1UW_01027 [Escherichia coli KTE80]
gi|432640246|ref|ZP_19876085.1| hypothetical protein A1W1_01106 [Escherichia coli KTE83]
gi|432665318|ref|ZP_19900902.1| hypothetical protein A1Y3_01917 [Escherichia coli KTE116]
gi|432774221|ref|ZP_20008505.1| hypothetical protein A1SG_02306 [Escherichia coli KTE54]
gi|432838762|ref|ZP_20072251.1| hypothetical protein A1YQ_01719 [Escherichia coli KTE140]
gi|432885513|ref|ZP_20100034.1| hypothetical protein A31C_01747 [Escherichia coli KTE158]
gi|432911589|ref|ZP_20117864.1| hypothetical protein A13Q_01470 [Escherichia coli KTE190]
gi|433018001|ref|ZP_20206258.1| hypothetical protein WI7_01054 [Escherichia coli KTE105]
gi|433052407|ref|ZP_20239627.1| hypothetical protein WIK_01236 [Escherichia coli KTE122]
gi|433067293|ref|ZP_20254113.1| hypothetical protein WIQ_01190 [Escherichia coli KTE128]
gi|433158012|ref|ZP_20342873.1| hypothetical protein WKU_01094 [Escherichia coli KTE177]
gi|433177567|ref|ZP_20362012.1| hypothetical protein WGM_01236 [Escherichia coli KTE82]
gi|433202578|ref|ZP_20386373.1| hypothetical protein WGY_01165 [Escherichia coli KTE95]
gi|218431550|emb|CAR12428.1| conserved hypothetical protein [Escherichia coli UMN026]
gi|284920869|emb|CBG33932.1| putative DNA and/or RNA unwinding protein [Escherichia coli 042]
gi|291428919|gb|EFF01944.1| hypothetical protein ECGG_02724 [Escherichia coli FVEC1412]
gi|298279809|gb|EFI21317.1| ymdB protein [Escherichia coli FVEC1302]
gi|300356831|gb|EFJ72701.1| RNase III regulator YmdB [Escherichia coli MS 198-1]
gi|331060869|gb|EGI32833.1| RNase III regulator YmdB [Escherichia coli TA143]
gi|345339126|gb|EGW71552.1| macro domain protein [Escherichia coli STEC_C165-02]
gi|373246925|gb|EHP66374.1| UPF0189 protein ymdB [Escherichia coli 4_1_47FAA]
gi|388402271|gb|EIL62846.1| hypothetical protein EC5761_19542 [Escherichia coli 576-1]
gi|430877463|gb|ELC00914.1| hypothetical protein WCA_01969 [Escherichia coli KTE2]
gi|430927818|gb|ELC48381.1| hypothetical protein WEK_01400 [Escherichia coli KTE26]
gi|430958510|gb|ELC77104.1| hypothetical protein A139_00668 [Escherichia coli KTE181]
gi|430990706|gb|ELD07127.1| hypothetical protein A15I_00917 [Escherichia coli KTE204]
gi|431008172|gb|ELD22979.1| hypothetical protein A15Q_01325 [Escherichia coli KTE208]
gi|431022943|gb|ELD36203.1| hypothetical protein A171_00662 [Escherichia coli KTE213]
gi|431043861|gb|ELD54142.1| hypothetical protein A17U_04722 [Escherichia coli KTE228]
gi|431072663|gb|ELD80414.1| hypothetical protein A195_00711 [Escherichia coli KTE235]
gi|431173680|gb|ELE73756.1| hypothetical protein A1UW_01027 [Escherichia coli KTE80]
gi|431184106|gb|ELE83872.1| hypothetical protein A1W1_01106 [Escherichia coli KTE83]
gi|431202953|gb|ELF01630.1| hypothetical protein A1Y3_01917 [Escherichia coli KTE116]
gi|431319566|gb|ELG07236.1| hypothetical protein A1SG_02306 [Escherichia coli KTE54]
gi|431391228|gb|ELG74876.1| hypothetical protein A1YQ_01719 [Escherichia coli KTE140]
gi|431418559|gb|ELH00954.1| hypothetical protein A31C_01747 [Escherichia coli KTE158]
gi|431443296|gb|ELH24373.1| hypothetical protein A13Q_01470 [Escherichia coli KTE190]
gi|431535315|gb|ELI11695.1| hypothetical protein WI7_01054 [Escherichia coli KTE105]
gi|431574488|gb|ELI47268.1| hypothetical protein WIK_01236 [Escherichia coli KTE122]
gi|431588955|gb|ELI60176.1| hypothetical protein WIQ_01190 [Escherichia coli KTE128]
gi|431680575|gb|ELJ46398.1| hypothetical protein WKU_01094 [Escherichia coli KTE177]
gi|431708483|gb|ELJ72992.1| hypothetical protein WGM_01236 [Escherichia coli KTE82]
gi|431724676|gb|ELJ88592.1| hypothetical protein WGY_01165 [Escherichia coli KTE95]
Length = 177
Score = 42.7 bits (99), Expect = 0.62, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI L G V+H +GP
Sbjct: 63 GHAVIT-------LAGDLSAKAVVHTVGP 84
>gi|190575645|ref|YP_001973490.1| hypothetical protein Smlt3795 [Stenotrophomonas maltophilia K279a]
gi|190013567|emb|CAQ47202.1| putative Appr-1-p processing protein [Stenotrophomonas maltophilia
K279a]
Length = 199
Score = 42.7 bits (99), Expect = 0.62, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 45/89 (50%), Gaps = 15/89 (16%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPG-- 407
GDIT L + I NAAN L GGGGV+ AI AAGPAL +A + L PG
Sbjct: 8 GDITTL------AVDAIVNAANETLL-GGGGVDGAIHRAAGPAL-LAECGQLPELRPGVR 59
Query: 408 -NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
+ VP S L R +V+H +GP
Sbjct: 60 CPTGEVPATSAYALPAR----YVLHTVGP 84
>gi|146311217|ref|YP_001176291.1| hypothetical protein Ent638_1561 [Enterobacter sp. 638]
gi|334351225|sp|A4W960.1|YMDB_ENT38 RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|145318093|gb|ABP60240.1| Appr-1-p processing domain protein [Enterobacter sp. 638]
Length = 180
Score = 42.7 bits (99), Expect = 0.62, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 44/90 (48%), Gaps = 17/90 (18%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLY 405
VGDIT + +VI NAAN L GGGGV+ AI AAGP L A ++
Sbjct: 9 VGDITTMEV------DVIVNAANPSLM-GGGGVDGAIHRAAGPQLLEACKTVRQQQGECA 61
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PG++VI + G VIH +GP
Sbjct: 62 PGHAVIT-------IAGDLPAKAVIHAVGP 84
>gi|156934469|ref|YP_001438385.1| hypothetical protein ESA_02300 [Cronobacter sakazakii ATCC BAA-894]
gi|334351227|sp|A7MG20.1|YMDB_ENTS8 RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|156532723|gb|ABU77549.1| hypothetical protein ESA_02300 [Cronobacter sakazakii ATCC BAA-894]
Length = 180
Score = 42.7 bits (99), Expect = 0.62, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 43/89 (48%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDIT + +VI NAAN L GGGGV+ AI AAGPAL A ++ P
Sbjct: 10 GDITLIDV------DVIVNAANPSLM-GGGGVDGAIHRAAGPALLAACRQVRQQQGECQP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI G V+H +GP
Sbjct: 63 GHAVITE-------AGDLAAKAVVHTVGP 84
>gi|21224310|ref|NP_630089.1| phosphatase [Streptomyces coelicolor A3(2)]
gi|15020692|emb|CAC44587.1| putative phosphatase [Streptomyces coelicolor A3(2)]
Length = 842
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 23/165 (13%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKSTF + + C+ D ++ S L A L
Sbjct: 13 LVVLIGASGSGKSTFARRHFTPTEVISSDFCRGLVADDENDQSASRDAFDVLHYIAGKRL 72
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
G+ +D N++++ R ++L +V A+VLD+P ++C R+ R +
Sbjct: 73 AAGRRTVVDATNVQQDARRQLIELARKHDVLPIAIVLDVPEQVCAERNATRSDR------ 126
Query: 135 GKAAAVVNRMLQK--KELPKL-----SEGFSRITLCQNENDVQAA 172
A + R++Q+ +EL + EGF ++ + + + + A
Sbjct: 127 ---ADMPRRVIQRHTRELRRSLRHLEREGFRKVHVLRGTAEAEHA 168
>gi|377832494|ref|ZP_09815452.1| RNase III regulator YmdB [Lactobacillus mucosae LM1]
gi|377553686|gb|EHT15407.1| RNase III regulator YmdB [Lactobacillus mucosae LM1]
Length = 167
Score = 42.7 bits (99), Expect = 0.63, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 43/89 (48%), Gaps = 21/89 (23%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT+ + I NAAN L GGGGV+ AI AAGPAL VA E+ G +
Sbjct: 10 GDITKYQV------DAIVNAANTTLM-GGGGVDGAIHRAAGPALYVA-CEKFHGCPTGEA 61
Query: 410 VIVP---LPSTSPLCGREGVTHVIHVLGP 435
I P LP+ ++IH GP
Sbjct: 62 RITPGFQLPA----------KYIIHTPGP 80
>gi|322707831|gb|EFY99409.1| DNA kinase/phosphatase Pnk1 [Metarhizium anisopliae ARSEF 23]
Length = 483
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 11/74 (14%)
Query: 15 EKKWKQILVIMVGAPGSGKSTFCEHVMRSSARP--WARICQDTINKGKSGTKVQCLTSAS 72
E+K ++ +V+ G PG+GKSTF R RP + R+ QD++ ++ +CL +A
Sbjct: 300 ERKNQKDVVLFCGPPGAGKSTF----FRRHLRPLGYERVNQDSLK-----SRDKCLQAAR 350
Query: 73 SALKKGKSVFLDRC 86
L +G SV + RC
Sbjct: 351 ELLSEGSSVAVGRC 364
>gi|320593831|gb|EFX06234.1| diphosphomevalonate decarboxylase [Grosmannia clavigera kw1407]
Length = 927
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
L++ G P +GKS+F + + R+ QDT+ TK +CL +A+S L+ G SV
Sbjct: 770 LLVFCGPPAAGKSSFFRDCLDPLG--YQRVNQDTLK-----TKEKCLKAATSLLQDGSSV 822
Query: 82 FLDRCNLEREQRTDFVKLGG 101
+D N + R +V L
Sbjct: 823 AIDNTNADPATRAIWVALAA 842
>gi|289768489|ref|ZP_06527867.1| phosphatase [Streptomyces lividans TK24]
gi|289698688|gb|EFD66117.1| phosphatase [Streptomyces lividans TK24]
Length = 842
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 23/165 (13%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++GA GSGKSTF + + C+ D ++ S L A L
Sbjct: 13 LVVLIGASGSGKSTFARRHFTPTEVISSDFCRGLVADDENDQSASRDAFDVLHYIAGKRL 72
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
G+ +D N++++ R ++L +V A+VLD+P ++C R+ R +
Sbjct: 73 AAGRRTVVDATNVQQDARRQLIELARKHDVLPIAIVLDVPEQVCAERNATRSDR------ 126
Query: 135 GKAAAVVNRMLQK--KELPKL-----SEGFSRITLCQNENDVQAA 172
A + R++Q+ +EL + EGF ++ + + + + A
Sbjct: 127 ---ADMPRRVIQRHTRELRRSLRHLEREGFRKVHVLRGTAEAEHA 168
>gi|167389215|ref|XP_001738865.1| polynucleotide kinase- 3'-phosphatase [Entamoeba dispar SAW760]
gi|165897694|gb|EDR24776.1| polynucleotide kinase- 3'-phosphatase, putative [Entamoeba dispar
SAW760]
Length = 375
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 22/145 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+++ VG+P SGK++F + ++ W IN G K +C+ A L + +S
Sbjct: 222 IILFVGSPASGKTSFYKKYLKPMGYEW-------INMDTLGNKTKCMREAKK-LIENRSF 273
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGN----LQGGKA 137
+D N E R +F++L D+P + K++ + N L K
Sbjct: 274 VIDNSNPTVEGRQEFIELAKKN--------DIPIRCFYFACDKKLTNHLNTFRALTTNKN 325
Query: 138 AAVVNRMLQKKEL--PKLSEGFSRI 160
V+ + K PK EGF+ I
Sbjct: 326 IPVIAINVYYKNFVQPKKEEGFTEI 350
>gi|125975250|ref|YP_001039160.1| metallophosphoesterase [Clostridium thermocellum ATCC 27405]
gi|125715475|gb|ABN53967.1| metallophosphoesterase [Clostridium thermocellum ATCC 27405]
Length = 870
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++G+ GSGKSTF + + + + C+ D ++ +G L S L
Sbjct: 10 LVVLIGSSGSGKSTFAKKHFKPTEVISSDFCRGLVSDDENDQTVTGAAFDVLHYIVSKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHE 129
+ GK +D N++ R +++ D H AVV +LP K+C R+ R + +
Sbjct: 70 QLGKLTVVDATNVQESARKPLIEIAK---DYHCFPVAVVFNLPEKVCQERNKNRTDRQ 124
>gi|433547138|ref|ZP_20503411.1| hypothetical protein D478_25678 [Brevibacillus agri BAB-2500]
gi|432181574|gb|ELK39202.1| hypothetical protein D478_25678 [Brevibacillus agri BAB-2500]
Length = 319
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 16/151 (10%)
Query: 22 LVIMVGAPGSGKSTFCEH-------VMRSSARPWARICQDTINKGKSGTKVQCLTS-ASS 73
L++MVG PGSGK+ E V+ S+ + D + K+ Q + +
Sbjct: 4 LIMMVGIPGSGKTRAAEQIAKKERAVLVSTDAVRLELFGDEAKRRKNPLVFQAVYARIGQ 63
Query: 74 ALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQ 133
A G V D N++R++R ++ P + L+ P +C+ R+ R +
Sbjct: 64 AFAAGSDVVFDATNVDRDKRIAVLERFAPAI-AECYYLNTPFDVCLQRNQAR-------K 115
Query: 134 GGKAAAVVNRMLQKKELPKLSEGFSRITLCQ 164
A+V+ + + P EGFS + L
Sbjct: 116 RKLDASVLEKYRKNLHFPLHREGFSTVHLVH 146
>gi|423119703|ref|ZP_17107387.1| UPF0189 protein ymdB [Klebsiella oxytoca 10-5246]
gi|376397542|gb|EHT10173.1| UPF0189 protein ymdB [Klebsiella oxytoca 10-5246]
Length = 177
Score = 42.7 bits (99), Expect = 0.65, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 45/90 (50%), Gaps = 17/90 (18%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLY 405
+GDIT L +VI NAAN L GGGGV+ AI AAGP L A ++
Sbjct: 9 LGDITTLDV------DVIVNAANPSLL-GGGGVDGAIHRAAGPELLAACQVVRQQQGECP 61
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PG++VI G+ + VIH +GP
Sbjct: 62 PGHAVITT-------AGQLPASAVIHAVGP 84
>gi|260892300|ref|YP_003238397.1| Appr-1-p processing protein [Ammonifex degensii KC4]
gi|260864441|gb|ACX51547.1| Appr-1-p processing domain protein [Ammonifex degensii KC4]
Length = 175
Score = 42.7 bits (99), Expect = 0.65, Method: Composition-based stats.
Identities = 36/93 (38%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDITR + + NAAN L+PGGG V AI AAGP LE E +SL P
Sbjct: 15 GDITRQEG-----FDAVVNAANAWLRPGGG-VAGAIHRAAGPELE----EECRSLAP--- 61
Query: 410 VIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRP 442
I P + R ++IH LGP P
Sbjct: 62 -ISPGQAVITGAYRLPNRYIIHCLGPRYGIDEP 93
>gi|418463069|ref|ZP_13034097.1| putative kinase [Saccharomonospora azurea SZMC 14600]
gi|359734680|gb|EHK83651.1| putative kinase [Saccharomonospora azurea SZMC 14600]
Length = 158
Score = 42.7 bits (99), Expect = 0.65, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 8/116 (6%)
Query: 21 ILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQ-------CLTSASS 73
+L +++GAPGSGKST S A + + G + + A
Sbjct: 1 MLTVLIGAPGSGKSTLAARRETSGAVVLSLDTARAVVGAHEGDQTATAAAVDYTIRRAHQ 60
Query: 74 ALKKGKSVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEH 128
L +G+ V LD + +R ++ + V AVVLD P +C++R+ R H
Sbjct: 61 TLAEGRPVVLDATSTTAPERATWLGIAREHGVPARAVVLDTPLPVCLARNAVRPPH 116
>gi|256003089|ref|ZP_05428081.1| metallophosphoesterase [Clostridium thermocellum DSM 2360]
gi|281419241|ref|ZP_06250257.1| metallophosphoesterase [Clostridium thermocellum JW20]
gi|385777733|ref|YP_005686898.1| metallophosphoesterase [Clostridium thermocellum DSM 1313]
gi|419722714|ref|ZP_14249851.1| metallophosphoesterase [Clostridium thermocellum AD2]
gi|419726215|ref|ZP_14253238.1| metallophosphoesterase [Clostridium thermocellum YS]
gi|255992780|gb|EEU02870.1| metallophosphoesterase [Clostridium thermocellum DSM 2360]
gi|281407107|gb|EFB37369.1| metallophosphoesterase [Clostridium thermocellum JW20]
gi|316939413|gb|ADU73447.1| metallophosphoesterase [Clostridium thermocellum DSM 1313]
gi|380770267|gb|EIC04164.1| metallophosphoesterase [Clostridium thermocellum YS]
gi|380781094|gb|EIC10755.1| metallophosphoesterase [Clostridium thermocellum AD2]
Length = 870
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++G+ GSGKSTF + + + + C+ D ++ +G L S L
Sbjct: 10 LVVLIGSSGSGKSTFAKKHFKPTEVISSDFCRGLVSDDENDQTVTGAAFDVLHYIVSKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHE 129
+ GK +D N++ R +++ D H AVV +LP K+C R+ R + +
Sbjct: 70 QLGKLTVVDATNVQESARKPLIEIAK---DYHCFPVAVVFNLPEKVCQERNKNRTDRQ 124
>gi|291458200|ref|ZP_06597590.1| ADP-ribosylglycohydrolase family protein [Oribacterium sp. oral
taxon 078 str. F0262]
gi|291418733|gb|EFE92452.1| ADP-ribosylglycohydrolase family protein [Oribacterium sp. oral
taxon 078 str. F0262]
Length = 592
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 31/121 (25%)
Query: 330 LVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAA 389
++ A + HI +F VGDIT++ I NAAN L GGGGV+ AI AA
Sbjct: 408 ILEANKPENHI----YFD-VGDITKI------DVEAIVNAANKSLL-GGGGVDGAIHRAA 455
Query: 390 GPAL-----EVATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNP-RRPN 443
GP L ++ E ++ G ++ +VIH +GP NP ++P+
Sbjct: 456 GPGLLEECRKLNGCEVGEAKITGGWLL-------------KANYVIHTVGPRYNPKKKPD 502
Query: 444 C 444
C
Sbjct: 503 C 503
>gi|258654772|ref|YP_003203928.1| Appr-1-p processing protein [Nakamurella multipartita DSM 44233]
gi|258557997|gb|ACV80939.1| Appr-1-p processing domain protein [Nakamurella multipartita DSM
44233]
Length = 175
Score = 42.4 bits (98), Expect = 0.69, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 15/89 (16%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT + + + NAAN RL GGGGV+ AI A GP + E ++ +P
Sbjct: 8 GDITAQHV------DAVVNAANHRLL-GGGGVDGAIHRAGGPQILAECRELRRTRFPDG- 59
Query: 410 VIVPLP---STSPLCGREGVTHVIHVLGP 435
LP S + GR VIH +GP
Sbjct: 60 ----LPTGESVATTAGRLPARWVIHTVGP 84
>gi|377556710|ref|ZP_09786399.1| Appr-1-p processing domain protein [Lactobacillus gastricus PS3]
gi|376167789|gb|EHS86609.1| Appr-1-p processing domain protein [Lactobacillus gastricus PS3]
Length = 171
Score = 42.4 bits (98), Expect = 0.70, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 21/90 (23%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGN 408
+GDIT+ + I NAAN L+ GGGGV+ AI AGPAL++A A+ G
Sbjct: 8 LGDITQFKV------DAIVNAANTTLR-GGGGVDGAIHRTAGPALDLAFAQLG-GCPTGQ 59
Query: 409 SVIVP---LPSTSPLCGREGVTHVIHVLGP 435
+ I P LP+ ++IH GP
Sbjct: 60 ARITPGFNLPA----------KYIIHTPGP 79
>gi|170768312|ref|ZP_02902765.1| appr-1-p processing enzyme domain protein [Escherichia albertii
TW07627]
gi|170123078|gb|EDS92009.1| appr-1-p processing enzyme domain protein [Escherichia albertii
TW07627]
Length = 177
Score = 42.4 bits (98), Expect = 0.71, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKLTV------DVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQLQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L + P V+H +GP
Sbjct: 63 GHAVITLTGSLP------AKAVVHTVGP 84
>gi|357387152|ref|YP_004901990.1| hypothetical protein KSE_01830 [Kitasatospora setae KM-6054]
gi|311893626|dbj|BAJ26034.1| hypothetical protein KSE_01830 [Kitasatospora setae KM-6054]
Length = 186
Score = 42.4 bits (98), Expect = 0.72, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGN 408
+GD+T T I AAN L GGGGV+ A+ AAGP L A A PG+
Sbjct: 13 LGDLTEQDTAA------IVTAANESLL-GGGGVDGAVHRAAGPRLAQAGGALAPC-EPGD 64
Query: 409 SVIVPLPSTSPLCGREGVTHVIHVLGP 435
+V P P V HVIH +GP
Sbjct: 65 AVATPAFDLCP-----PVRHVIHTVGP 86
>gi|423113743|ref|ZP_17101434.1| hypothetical protein HMPREF9689_01491 [Klebsiella oxytoca 10-5245]
gi|376387388|gb|EHT00098.1| hypothetical protein HMPREF9689_01491 [Klebsiella oxytoca 10-5245]
Length = 184
Score = 42.4 bits (98), Expect = 0.73, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 44/90 (48%), Gaps = 17/90 (18%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLY 405
+GDIT L +VI NAAN L GGGGV+ AI AAGP L A ++
Sbjct: 9 LGDITTL------AVDVIVNAANPSLL-GGGGVDGAIHRAAGPDLLAACKVVRQQQGECP 61
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PG++VI G + VIH +GP
Sbjct: 62 PGHAVITT-------AGNLPASAVIHAVGP 84
>gi|315648210|ref|ZP_07901311.1| Appr-1-p processing domain protein [Paenibacillus vortex V453]
gi|315276856|gb|EFU40199.1| Appr-1-p processing domain protein [Paenibacillus vortex V453]
Length = 191
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 45/92 (48%), Gaps = 17/92 (18%)
Query: 347 TFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAK---S 403
F+GDIT +TG ++I NAAN L GG GV+ AI SA GP + E K
Sbjct: 13 VFIGDITT-WTG-----DIIVNAANSGLL-GGKGVDGAIHSAGGPEIMEQCMEIRKQQGG 65
Query: 404 LYPGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PGN+VI G H+IH +GP
Sbjct: 66 CPPGNAVITG-------AGNLPAQHIIHTVGP 90
>gi|423107771|ref|ZP_17095466.1| hypothetical protein HMPREF9687_01017 [Klebsiella oxytoca 10-5243]
gi|376386504|gb|EHS99215.1| hypothetical protein HMPREF9687_01017 [Klebsiella oxytoca 10-5243]
Length = 184
Score = 42.4 bits (98), Expect = 0.74, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 44/90 (48%), Gaps = 17/90 (18%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLY 405
+GDIT L +VI NAAN L GGGGV+ AI AAGP L A ++
Sbjct: 9 LGDITTL------AVDVIVNAANPSLL-GGGGVDGAIHRAAGPDLLAACKVVRQQQGECP 61
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PG++VI G + VIH +GP
Sbjct: 62 PGHAVITT-------AGNLPASAVIHAVGP 84
>gi|408822041|ref|ZP_11206931.1| RNase III inhibitor [Pseudomonas geniculata N1]
Length = 199
Score = 42.4 bits (98), Expect = 0.75, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 45/90 (50%), Gaps = 17/90 (18%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT L + I NAAN L GGGGV+ AI AAGPAL +A E+ L PG
Sbjct: 8 GDITTL------AVDAIVNAANETLL-GGGGVDGAIHRAAGPAL-LAECEQLPELRPG-- 57
Query: 410 VIVPLPSTSPLCGREG----VTHVIHVLGP 435
V P T + + HV+H +GP
Sbjct: 58 --VRCP-TGEVRATDAYALPAQHVLHTVGP 84
>gi|433129427|ref|ZP_20314889.1| hypothetical protein WKG_01169 [Escherichia coli KTE163]
gi|431649836|gb|ELJ17175.1| hypothetical protein WKG_01169 [Escherichia coli KTE163]
Length = 177
Score = 42.4 bits (98), Expect = 0.76, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGALP------AKAVVHTVGP 84
>gi|425287779|ref|ZP_18678685.1| RNase III regulator YmdB [Escherichia coli 3006]
gi|432369101|ref|ZP_19612201.1| hypothetical protein WCM_03055 [Escherichia coli KTE10]
gi|432530378|ref|ZP_19767415.1| hypothetical protein A191_03630 [Escherichia coli KTE233]
gi|408216998|gb|EKI41285.1| RNase III regulator YmdB [Escherichia coli 3006]
gi|430887728|gb|ELC10467.1| hypothetical protein WCM_03055 [Escherichia coli KTE10]
gi|431056217|gb|ELD65737.1| hypothetical protein A191_03630 [Escherichia coli KTE233]
Length = 177
Score = 42.4 bits (98), Expect = 0.76, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 15/89 (16%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYP 406
+GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 9 LGDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCP 61
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 62 TGHAVITLAGDLP------AKAVVHTVGP 84
>gi|407417206|gb|EKF38006.1| polynucleotide kinase 3'-phosphatase, putative [Trypanosoma cruzi
marinkellei]
Length = 500
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q +VI VG PG GK+TF ++ + + I +DT+ TK +CL+ A+ GK
Sbjct: 335 QEMVIFVGYPGCGKTTFFNRFLKPAG--YVHINRDTLK-----TKEKCLSEAAKWWNSGK 387
Query: 80 SVFLDRCNLEREQRTDFVKL 99
S+ +D N F+ +
Sbjct: 388 SIAVDNTNPSHSDCMPFIAM 407
>gi|315925151|ref|ZP_07921367.1| RNase III regulator YmdB [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621522|gb|EFV01487.1| RNase III regulator YmdB [Pseudoramibacter alactolyticus ATCC
23263]
Length = 187
Score = 42.4 bits (98), Expect = 0.76, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 43/86 (50%), Gaps = 15/86 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT L + C I NAAN L GGGGV+ AI AAGP L+ A A + G +
Sbjct: 25 GDITALR----IAC--IVNAANTTLL-GGGGVDGAIHRAAGPQLKAACA-KIGGCATGQA 76
Query: 410 VIVPLPSTSPLCGREGVTHVIHVLGP 435
VI R G +VIH +GP
Sbjct: 77 VITR-------GYRLGADYVIHTVGP 95
>gi|191166924|ref|ZP_03028748.1| appr-1-p processing enzyme domain protein [Escherichia coli B7A]
gi|193064553|ref|ZP_03045633.1| appr-1-p processing enzyme domain protein [Escherichia coli E22]
gi|194428417|ref|ZP_03060957.1| appr-1-p processing enzyme domain protein [Escherichia coli B171]
gi|209918299|ref|YP_002292383.1| hypothetical protein ECSE_1108 [Escherichia coli SE11]
gi|218694579|ref|YP_002402246.1| hypothetical protein EC55989_1158 [Escherichia coli 55989]
gi|260843286|ref|YP_003221064.1| hypothetical protein ECO103_1091 [Escherichia coli O103:H2 str.
12009]
gi|260854529|ref|YP_003228420.1| hypothetical protein ECO26_1379 [Escherichia coli O26:H11 str.
11368]
gi|260867409|ref|YP_003233811.1| hypothetical protein ECO111_1323 [Escherichia coli O111:H- str.
11128]
gi|300821177|ref|ZP_07101326.1| RNase III regulator YmdB [Escherichia coli MS 119-7]
gi|300902433|ref|ZP_07120415.1| RNase III regulator YmdB [Escherichia coli MS 84-1]
gi|300922567|ref|ZP_07138668.1| RNase III regulator YmdB [Escherichia coli MS 182-1]
gi|301305020|ref|ZP_07211122.1| RNase III regulator YmdB [Escherichia coli MS 124-1]
gi|301328588|ref|ZP_07221649.1| RNase III regulator YmdB [Escherichia coli MS 78-1]
gi|307310176|ref|ZP_07589826.1| Appr-1-p processing domain protein [Escherichia coli W]
gi|309794967|ref|ZP_07689387.1| RNase III regulator YmdB [Escherichia coli MS 145-7]
gi|331676834|ref|ZP_08377530.1| RNase III regulator YmdB [Escherichia coli H591]
gi|332279768|ref|ZP_08392181.1| conserved hypothetical protein [Shigella sp. D9]
gi|378713554|ref|YP_005278447.1| Appr-1-p processing protein [Escherichia coli KO11FL]
gi|386608407|ref|YP_006123893.1| appr-1-p processing domain-containing protein [Escherichia coli W]
gi|386701982|ref|YP_006165819.1| RNase III inhibitor [Escherichia coli KO11FL]
gi|386708855|ref|YP_006172576.1| RNase III inhibitor [Escherichia coli W]
gi|407468674|ref|YP_006784884.1| RNase III inhibitor [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407482596|ref|YP_006779745.1| RNase III inhibitor [Escherichia coli O104:H4 str. 2011C-3493]
gi|410483148|ref|YP_006770694.1| RNase III inhibitor [Escherichia coli O104:H4 str. 2009EL-2050]
gi|415782800|ref|ZP_11491749.1| macro domain protein [Escherichia coli EPECa14]
gi|415794509|ref|ZP_11496422.1| macro domain protein [Escherichia coli E128010]
gi|415824348|ref|ZP_11512637.1| macro domain protein [Escherichia coli OK1180]
gi|415865718|ref|ZP_11538487.1| RNase III regulator YmdB [Escherichia coli MS 85-1]
gi|416342547|ref|ZP_11676711.1| hypothetical protein ECoL_01645 [Escherichia coli EC4100B]
gi|417150193|ref|ZP_11990083.1| macro domain protein [Escherichia coli 1.2264]
gi|417154752|ref|ZP_11992881.1| macro domain protein [Escherichia coli 96.0497]
gi|417171540|ref|ZP_12001868.1| macro domain protein [Escherichia coli 3.2608]
gi|417180359|ref|ZP_12008067.1| macro domain protein [Escherichia coli 93.0624]
gi|417192975|ref|ZP_12014822.1| macro domain protein [Escherichia coli 4.0522]
gi|417204205|ref|ZP_12018663.1| macro domain protein [Escherichia coli JB1-95]
gi|417254316|ref|ZP_12046070.1| macro domain protein [Escherichia coli 4.0967]
gi|417299087|ref|ZP_12086321.1| macro domain protein [Escherichia coli 900105 (10e)]
gi|417580326|ref|ZP_12231142.1| macro domain protein [Escherichia coli STEC_B2F1]
gi|417590912|ref|ZP_12241625.1| macro domain protein [Escherichia coli 2534-86]
gi|417596106|ref|ZP_12246763.1| macro domain protein [Escherichia coli 3030-1]
gi|417607404|ref|ZP_12257916.1| macro domain protein [Escherichia coli STEC_DG131-3]
gi|417622574|ref|ZP_12272891.1| macro domain protein [Escherichia coli STEC_H.1.8]
gi|417638386|ref|ZP_12288551.1| macro domain protein [Escherichia coli TX1999]
gi|417666319|ref|ZP_12315874.1| macro domain protein [Escherichia coli STEC_O31]
gi|417804500|ref|ZP_12451503.1| RNase III inhibitor [Escherichia coli O104:H4 str. LB226692]
gi|417832242|ref|ZP_12478731.1| RNase III inhibitor [Escherichia coli O104:H4 str. 01-09591]
gi|417865027|ref|ZP_12510072.1| hypothetical protein C22711_1959 [Escherichia coli O104:H4 str.
C227-11]
gi|418043231|ref|ZP_12681402.1| Appr-1-p processing domain protein [Escherichia coli W26]
gi|418941344|ref|ZP_13494675.1| RNase III inhibitor [Escherichia coli O157:H43 str. T22]
gi|419169039|ref|ZP_13713433.1| hypothetical protein ECDEC7A_1190 [Escherichia coli DEC7A]
gi|419180017|ref|ZP_13723640.1| regulator of RNase III activity [Escherichia coli DEC7C]
gi|419185579|ref|ZP_13729101.1| regulator of RNase III activity [Escherichia coli DEC7D]
gi|419190849|ref|ZP_13734315.1| hypothetical protein ECDEC7E_1128 [Escherichia coli DEC7E]
gi|419196235|ref|ZP_13739637.1| hypothetical protein ECDEC8A_1338 [Escherichia coli DEC8A]
gi|419202384|ref|ZP_13745599.1| regulator of RNase III activity [Escherichia coli DEC8B]
gi|419208534|ref|ZP_13751649.1| regulator of RNase III activity [Escherichia coli DEC8C]
gi|419214818|ref|ZP_13757838.1| regulator of RNase III activity [Escherichia coli DEC8D]
gi|419220518|ref|ZP_13763466.1| regulator of RNase III activity [Escherichia coli DEC8E]
gi|419225917|ref|ZP_13768795.1| regulator of RNase III activity [Escherichia coli DEC9A]
gi|419231634|ref|ZP_13774422.1| regulator of RNase III activity [Escherichia coli DEC9B]
gi|419237017|ref|ZP_13779760.1| regulator of RNase III activity [Escherichia coli DEC9C]
gi|419242553|ref|ZP_13785200.1| regulator of RNase III activity [Escherichia coli DEC9D]
gi|419248076|ref|ZP_13790683.1| regulator of RNase III activity [Escherichia coli DEC9E]
gi|419254004|ref|ZP_13796536.1| regulator of RNase III activity [Escherichia coli DEC10A]
gi|419260113|ref|ZP_13802551.1| regulator of RNase III activity [Escherichia coli DEC10B]
gi|419266133|ref|ZP_13808508.1| regulator of RNase III activity [Escherichia coli DEC10C]
gi|419271754|ref|ZP_13814069.1| regulator of RNase III activity [Escherichia coli DEC10D]
gi|419277327|ref|ZP_13819588.1| regulator of RNase III activity [Escherichia coli DEC10E]
gi|419283203|ref|ZP_13825405.1| regulator of RNase III activity [Escherichia coli DEC10F]
gi|419288756|ref|ZP_13830860.1| regulator of RNase III activity [Escherichia coli DEC11A]
gi|419293995|ref|ZP_13836047.1| regulator of RNase III activity [Escherichia coli DEC11B]
gi|419299448|ref|ZP_13841458.1| hypothetical protein ECDEC11C_1326 [Escherichia coli DEC11C]
gi|419305664|ref|ZP_13847573.1| hypothetical protein ECDEC11D_1229 [Escherichia coli DEC11D]
gi|419310681|ref|ZP_13852552.1| hypothetical protein ECDEC11E_1208 [Escherichia coli DEC11E]
gi|419315988|ref|ZP_13857810.1| hypothetical protein ECDEC12A_1290 [Escherichia coli DEC12A]
gi|419322005|ref|ZP_13863732.1| regulator of RNase III activity [Escherichia coli DEC12B]
gi|419328082|ref|ZP_13869709.1| hypothetical protein ECDEC12C_1291 [Escherichia coli DEC12C]
gi|419338938|ref|ZP_13880422.1| regulator of RNase III activity [Escherichia coli DEC12E]
gi|419344675|ref|ZP_13886057.1| regulator of RNase III activity [Escherichia coli DEC13A]
gi|419349114|ref|ZP_13890467.1| regulator of RNase III activity [Escherichia coli DEC13B]
gi|419354215|ref|ZP_13895491.1| regulator of RNase III activity [Escherichia coli DEC13C]
gi|419359500|ref|ZP_13900725.1| regulator of RNase III activity [Escherichia coli DEC13D]
gi|419364699|ref|ZP_13905871.1| regulator of RNase III activity [Escherichia coli DEC13E]
gi|419380115|ref|ZP_13921082.1| regulator of RNase III activity [Escherichia coli DEC14C]
gi|419385459|ref|ZP_13926347.1| regulator of RNase III activity [Escherichia coli DEC14D]
gi|419390624|ref|ZP_13931452.1| regulator of RNase III activity [Escherichia coli DEC15A]
gi|419395844|ref|ZP_13936623.1| regulator of RNase III activity [Escherichia coli DEC15B]
gi|419401221|ref|ZP_13941948.1| regulator of RNase III activity [Escherichia coli DEC15C]
gi|419406345|ref|ZP_13947040.1| regulator of RNase III activity [Escherichia coli DEC15D]
gi|419411911|ref|ZP_13952574.1| regulator of RNase III activity [Escherichia coli DEC15E]
gi|419806654|ref|ZP_14331752.1| Appr-1-p processing domain protein [Escherichia coli AI27]
gi|419868645|ref|ZP_14390904.1| RNase III inhibitor [Escherichia coli O103:H2 str. CVM9450]
gi|419879203|ref|ZP_14400647.1| RNase III inhibitor [Escherichia coli O111:H11 str. CVM9534]
gi|419885085|ref|ZP_14405906.1| RNase III inhibitor [Escherichia coli O111:H11 str. CVM9545]
gi|419886652|ref|ZP_14407286.1| RNase III inhibitor [Escherichia coli O111:H8 str. CVM9570]
gi|419894217|ref|ZP_14414146.1| RNase III inhibitor [Escherichia coli O111:H8 str. CVM9574]
gi|419900832|ref|ZP_14420246.1| RNase III inhibitor [Escherichia coli O26:H11 str. CVM9942]
gi|419905835|ref|ZP_14424780.1| Appr-1-p processing protein [Escherichia coli O26:H11 str.
CVM10026]
gi|420090287|ref|ZP_14602059.1| RNase III inhibitor [Escherichia coli O111:H8 str. CVM9602]
gi|420093958|ref|ZP_14605582.1| RNase III inhibitor [Escherichia coli O111:H8 str. CVM9634]
gi|420103670|ref|ZP_14614495.1| RNase III inhibitor [Escherichia coli O111:H11 str. CVM9455]
gi|420111977|ref|ZP_14621790.1| RNase III inhibitor [Escherichia coli O111:H11 str. CVM9553]
gi|420117397|ref|ZP_14626759.1| RNase III inhibitor [Escherichia coli O26:H11 str. CVM10021]
gi|420122833|ref|ZP_14631737.1| RNase III inhibitor [Escherichia coli O26:H11 str. CVM10030]
gi|420128410|ref|ZP_14636967.1| RNase III inhibitor [Escherichia coli O26:H11 str. CVM10224]
gi|420131045|ref|ZP_14639514.1| RNase III inhibitor [Escherichia coli O26:H11 str. CVM9952]
gi|420384808|ref|ZP_14884180.1| hypothetical protein ECEPECA12_1173 [Escherichia coli EPECa12]
gi|420390649|ref|ZP_14889913.1| regulator of RNase III activity [Escherichia coli EPEC C342-62]
gi|422354604|ref|ZP_16435339.1| RNase III regulator YmdB [Escherichia coli MS 117-3]
gi|422775102|ref|ZP_16828758.1| macro domain-containing protein [Escherichia coli H120]
gi|422958770|ref|ZP_16970701.1| UPF0189 protein ymdB [Escherichia coli H494]
gi|422991928|ref|ZP_16982699.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. C227-11]
gi|422993878|ref|ZP_16984642.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. C236-11]
gi|422999057|ref|ZP_16989813.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 09-7901]
gi|423002656|ref|ZP_16993402.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 04-8351]
gi|423009192|ref|ZP_16999930.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-3677]
gi|423023384|ref|ZP_17014087.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4404]
gi|423028532|ref|ZP_17019225.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4522]
gi|423029398|ref|ZP_17020086.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4623]
gi|423037237|ref|ZP_17027911.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423042352|ref|ZP_17033019.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423049043|ref|ZP_17039700.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423052624|ref|ZP_17041432.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423059592|ref|ZP_17048388.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4632 C5]
gi|424749208|ref|ZP_18177322.1| RNase III inhibitor [Escherichia coli O26:H11 str. CFSAN001629]
gi|424755274|ref|ZP_18183157.1| RNase III inhibitor [Escherichia coli O111:H11 str. CFSAN001630]
gi|424767869|ref|ZP_18195177.1| RNase III inhibitor [Escherichia coli O111:H8 str. CFSAN001632]
gi|425378281|ref|ZP_18762573.1| RNase III regulator YmdB [Escherichia coli EC1865]
gi|425421718|ref|ZP_18802911.1| RNase III regulator YmdB [Escherichia coli 0.1288]
gi|427804201|ref|ZP_18971268.1| putative polyprotein [Escherichia coli chi7122]
gi|427808782|ref|ZP_18975847.1| putative polyprotein [Escherichia coli]
gi|429723441|ref|ZP_19258323.1| hypothetical protein MO3_01500 [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429723785|ref|ZP_19258660.1| hypothetical protein MO5_04293 [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429773520|ref|ZP_19305533.1| hypothetical protein C212_00084 [Escherichia coli O104:H4 str.
11-02030]
gi|429776510|ref|ZP_19308490.1| hypothetical protein C213_00082 [Escherichia coli O104:H4 str.
11-02033-1]
gi|429781734|ref|ZP_19313661.1| hypothetical protein C214_00083 [Escherichia coli O104:H4 str.
11-02092]
gi|429786928|ref|ZP_19318819.1| hypothetical protein C215_00082 [Escherichia coli O104:H4 str.
11-02093]
gi|429792107|ref|ZP_19323959.1| hypothetical protein C216_00083 [Escherichia coli O104:H4 str.
11-02281]
gi|429797320|ref|ZP_19329125.1| hypothetical protein C217_00083 [Escherichia coli O104:H4 str.
11-02318]
gi|429802525|ref|ZP_19334286.1| hypothetical protein C218_00082 [Escherichia coli O104:H4 str.
11-02913]
gi|429808896|ref|ZP_19340608.1| hypothetical protein C219_00084 [Escherichia coli O104:H4 str.
11-03439]
gi|429812948|ref|ZP_19344628.1| hypothetical protein C220_00083 [Escherichia coli O104:H4 str.
11-04080]
gi|429818154|ref|ZP_19349790.1| hypothetical protein C221_00082 [Escherichia coli O104:H4 str.
11-03943]
gi|429911982|ref|ZP_19377938.1| hypothetical protein MO7_02416 [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429917824|ref|ZP_19383764.1| hypothetical protein O7C_04798 [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429922862|ref|ZP_19388783.1| hypothetical protein O7E_04800 [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429923713|ref|ZP_19389629.1| hypothetical protein O7G_00568 [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429932606|ref|ZP_19398500.1| hypothetical protein O7I_04481 [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429934209|ref|ZP_19400099.1| hypothetical protein O7K_01017 [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429939871|ref|ZP_19405745.1| hypothetical protein O7M_01567 [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429947510|ref|ZP_19413365.1| hypothetical protein O7O_04106 [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429950143|ref|ZP_19415991.1| hypothetical protein S7Y_01558 [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429958416|ref|ZP_19424245.1| hypothetical protein S91_04884 [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432480471|ref|ZP_19722432.1| hypothetical protein A15U_01586 [Escherichia coli KTE210]
gi|432749522|ref|ZP_19984134.1| hypothetical protein WEQ_00937 [Escherichia coli KTE29]
gi|432764412|ref|ZP_19998857.1| hypothetical protein A1S5_01972 [Escherichia coli KTE48]
gi|432813148|ref|ZP_20046993.1| hypothetical protein A1WM_04332 [Escherichia coli KTE101]
gi|432831018|ref|ZP_20064600.1| hypothetical protein A1YM_02810 [Escherichia coli KTE135]
gi|433134222|ref|ZP_20319590.1| hypothetical protein WKI_01166 [Escherichia coli KTE166]
gi|443617158|ref|YP_007381014.1| RNase III inhibitor [Escherichia coli APEC O78]
gi|450213239|ref|ZP_21894773.1| RNase III inhibitor [Escherichia coli O08]
gi|190903036|gb|EDV62761.1| appr-1-p processing enzyme domain protein [Escherichia coli B7A]
gi|192927805|gb|EDV82419.1| appr-1-p processing enzyme domain protein [Escherichia coli E22]
gi|194413469|gb|EDX29751.1| appr-1-p processing enzyme domain protein [Escherichia coli B171]
gi|209911558|dbj|BAG76632.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218351311|emb|CAU97017.1| conserved hypothetical protein [Escherichia coli 55989]
gi|257753178|dbj|BAI24680.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
gi|257758433|dbj|BAI29930.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
gi|257763765|dbj|BAI35260.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
gi|300405465|gb|EFJ89003.1| RNase III regulator YmdB [Escherichia coli MS 84-1]
gi|300421113|gb|EFK04424.1| RNase III regulator YmdB [Escherichia coli MS 182-1]
gi|300526476|gb|EFK47545.1| RNase III regulator YmdB [Escherichia coli MS 119-7]
gi|300839738|gb|EFK67498.1| RNase III regulator YmdB [Escherichia coli MS 124-1]
gi|300844980|gb|EFK72740.1| RNase III regulator YmdB [Escherichia coli MS 78-1]
gi|306909894|gb|EFN40388.1| Appr-1-p processing domain protein [Escherichia coli W]
gi|308121271|gb|EFO58533.1| RNase III regulator YmdB [Escherichia coli MS 145-7]
gi|315060324|gb|ADT74651.1| appr-1-p processing domain-containing protein [Escherichia coli W]
gi|315253843|gb|EFU33811.1| RNase III regulator YmdB [Escherichia coli MS 85-1]
gi|320200938|gb|EFW75522.1| hypothetical protein ECoL_01645 [Escherichia coli EC4100B]
gi|323156850|gb|EFZ42984.1| macro domain protein [Escherichia coli EPECa14]
gi|323163725|gb|EFZ49544.1| macro domain protein [Escherichia coli E128010]
gi|323175726|gb|EFZ61320.1| macro domain protein [Escherichia coli OK1180]
gi|323379115|gb|ADX51383.1| Appr-1-p processing domain protein [Escherichia coli KO11FL]
gi|323947343|gb|EGB43349.1| macro domain-containing protein [Escherichia coli H120]
gi|324017453|gb|EGB86672.1| RNase III regulator YmdB [Escherichia coli MS 117-3]
gi|331075523|gb|EGI46821.1| RNase III regulator YmdB [Escherichia coli H591]
gi|332102120|gb|EGJ05466.1| conserved hypothetical protein [Shigella sp. D9]
gi|340735017|gb|EGR64106.1| RNase III inhibitor [Escherichia coli O104:H4 str. 01-09591]
gi|340740742|gb|EGR74920.1| RNase III inhibitor [Escherichia coli O104:H4 str. LB226692]
gi|341918316|gb|EGT67930.1| hypothetical protein C22711_1959 [Escherichia coli O104:H4 str.
C227-11]
gi|345341985|gb|EGW74383.1| macro domain protein [Escherichia coli STEC_B2F1]
gi|345343842|gb|EGW76220.1| macro domain protein [Escherichia coli 2534-86]
gi|345357735|gb|EGW89925.1| macro domain protein [Escherichia coli 3030-1]
gi|345361450|gb|EGW93609.1| macro domain protein [Escherichia coli STEC_DG131-3]
gi|345383760|gb|EGX13631.1| macro domain protein [Escherichia coli STEC_H.1.8]
gi|345394883|gb|EGX24637.1| macro domain protein [Escherichia coli TX1999]
gi|354857161|gb|EHF17617.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. C227-11]
gi|354864953|gb|EHF25382.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. C236-11]
gi|354871732|gb|EHF32129.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 04-8351]
gi|354875234|gb|EHF35600.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 09-7901]
gi|354877482|gb|EHF37841.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4404]
gi|354882306|gb|EHF42630.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4522]
gi|354883014|gb|EHF43336.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-3677]
gi|354899315|gb|EHF59464.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354901138|gb|EHF61266.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4623]
gi|354902792|gb|EHF62905.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354904985|gb|EHF65070.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354916212|gb|EHF76186.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4632 C5]
gi|354921375|gb|EHF81300.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4632 C4]
gi|371596599|gb|EHN85437.1| UPF0189 protein ymdB [Escherichia coli H494]
gi|375323310|gb|EHS69024.1| RNase III inhibitor [Escherichia coli O157:H43 str. T22]
gi|378018257|gb|EHV81124.1| hypothetical protein ECDEC7A_1190 [Escherichia coli DEC7A]
gi|378027202|gb|EHV89834.1| regulator of RNase III activity [Escherichia coli DEC7C]
gi|378032997|gb|EHV95578.1| regulator of RNase III activity [Escherichia coli DEC7D]
gi|378040912|gb|EHW03375.1| hypothetical protein ECDEC7E_1128 [Escherichia coli DEC7E]
gi|378050937|gb|EHW13259.1| hypothetical protein ECDEC8A_1338 [Escherichia coli DEC8A]
gi|378054320|gb|EHW16599.1| regulator of RNase III activity [Escherichia coli DEC8B]
gi|378058907|gb|EHW21113.1| regulator of RNase III activity [Escherichia coli DEC8C]
gi|378066202|gb|EHW28339.1| regulator of RNase III activity [Escherichia coli DEC8D]
gi|378070652|gb|EHW32730.1| regulator of RNase III activity [Escherichia coli DEC8E]
gi|378079217|gb|EHW41195.1| regulator of RNase III activity [Escherichia coli DEC9A]
gi|378081352|gb|EHW43307.1| regulator of RNase III activity [Escherichia coli DEC9B]
gi|378087880|gb|EHW49736.1| regulator of RNase III activity [Escherichia coli DEC9C]
gi|378093904|gb|EHW55708.1| regulator of RNase III activity [Escherichia coli DEC9D]
gi|378100241|gb|EHW61938.1| regulator of RNase III activity [Escherichia coli DEC9E]
gi|378104154|gb|EHW65815.1| regulator of RNase III activity [Escherichia coli DEC10A]
gi|378111758|gb|EHW73341.1| regulator of RNase III activity [Escherichia coli DEC10B]
gi|378115855|gb|EHW77389.1| regulator of RNase III activity [Escherichia coli DEC10C]
gi|378120523|gb|EHW81996.1| regulator of RNase III activity [Escherichia coli DEC10D]
gi|378132496|gb|EHW93848.1| regulator of RNase III activity [Escherichia coli DEC10E]
gi|378134212|gb|EHW95541.1| regulator of RNase III activity [Escherichia coli DEC11A]
gi|378136752|gb|EHW98039.1| regulator of RNase III activity [Escherichia coli DEC10F]
gi|378144099|gb|EHX05274.1| regulator of RNase III activity [Escherichia coli DEC11B]
gi|378151613|gb|EHX12721.1| hypothetical protein ECDEC11D_1229 [Escherichia coli DEC11D]
gi|378154664|gb|EHX15737.1| hypothetical protein ECDEC11C_1326 [Escherichia coli DEC11C]
gi|378160396|gb|EHX21393.1| hypothetical protein ECDEC11E_1208 [Escherichia coli DEC11E]
gi|378172154|gb|EHX33013.1| regulator of RNase III activity [Escherichia coli DEC12B]
gi|378173374|gb|EHX34214.1| hypothetical protein ECDEC12A_1290 [Escherichia coli DEC12A]
gi|378174860|gb|EHX35682.1| hypothetical protein ECDEC12C_1291 [Escherichia coli DEC12C]
gi|378189103|gb|EHX49697.1| regulator of RNase III activity [Escherichia coli DEC13A]
gi|378192942|gb|EHX53488.1| regulator of RNase III activity [Escherichia coli DEC12E]
gi|378204776|gb|EHX65192.1| regulator of RNase III activity [Escherichia coli DEC13B]
gi|378206608|gb|EHX67011.1| regulator of RNase III activity [Escherichia coli DEC13C]
gi|378206959|gb|EHX67361.1| regulator of RNase III activity [Escherichia coli DEC13D]
gi|378216520|gb|EHX76807.1| regulator of RNase III activity [Escherichia coli DEC13E]
gi|378231010|gb|EHX91122.1| regulator of RNase III activity [Escherichia coli DEC14C]
gi|378234908|gb|EHX94984.1| regulator of RNase III activity [Escherichia coli DEC14D]
gi|378241037|gb|EHY01005.1| regulator of RNase III activity [Escherichia coli DEC15A]
gi|378248182|gb|EHY08096.1| regulator of RNase III activity [Escherichia coli DEC15B]
gi|378248875|gb|EHY08785.1| regulator of RNase III activity [Escherichia coli DEC15C]
gi|378256518|gb|EHY16368.1| regulator of RNase III activity [Escherichia coli DEC15D]
gi|378260099|gb|EHY19904.1| regulator of RNase III activity [Escherichia coli DEC15E]
gi|383393509|gb|AFH18467.1| RNase III inhibitor [Escherichia coli KO11FL]
gi|383404547|gb|AFH10790.1| RNase III inhibitor [Escherichia coli W]
gi|383473807|gb|EID65815.1| Appr-1-p processing domain protein [Escherichia coli W26]
gi|384470340|gb|EIE54453.1| Appr-1-p processing domain protein [Escherichia coli AI27]
gi|386160786|gb|EIH22592.1| macro domain protein [Escherichia coli 1.2264]
gi|386167841|gb|EIH34357.1| macro domain protein [Escherichia coli 96.0497]
gi|386180810|gb|EIH58281.1| macro domain protein [Escherichia coli 3.2608]
gi|386185714|gb|EIH68440.1| macro domain protein [Escherichia coli 93.0624]
gi|386190156|gb|EIH78904.1| macro domain protein [Escherichia coli 4.0522]
gi|386198421|gb|EIH92597.1| macro domain protein [Escherichia coli JB1-95]
gi|386215260|gb|EII31754.1| macro domain protein [Escherichia coli 4.0967]
gi|386257481|gb|EIJ12968.1| macro domain protein [Escherichia coli 900105 (10e)]
gi|388332738|gb|EIK99401.1| RNase III inhibitor [Escherichia coli O111:H11 str. CVM9534]
gi|388344220|gb|EIL10087.1| RNase III inhibitor [Escherichia coli O103:H2 str. CVM9450]
gi|388351452|gb|EIL16689.1| RNase III inhibitor [Escherichia coli O111:H11 str. CVM9545]
gi|388364766|gb|EIL28599.1| RNase III inhibitor [Escherichia coli O111:H8 str. CVM9574]
gi|388364917|gb|EIL28733.1| RNase III inhibitor [Escherichia coli O111:H8 str. CVM9570]
gi|388377321|gb|EIL40146.1| RNase III inhibitor [Escherichia coli O26:H11 str. CVM9942]
gi|388380345|gb|EIL42949.1| Appr-1-p processing protein [Escherichia coli O26:H11 str.
CVM10026]
gi|391308146|gb|EIQ65864.1| hypothetical protein ECEPECA12_1173 [Escherichia coli EPECa12]
gi|391313838|gb|EIQ71405.1| regulator of RNase III activity [Escherichia coli EPEC C342-62]
gi|394385681|gb|EJE63204.1| RNase III inhibitor [Escherichia coli O26:H11 str. CVM10224]
gi|394386372|gb|EJE63876.1| RNase III inhibitor [Escherichia coli O111:H8 str. CVM9602]
gi|394397469|gb|EJE73732.1| RNase III inhibitor [Escherichia coli O111:H11 str. CVM9553]
gi|394397800|gb|EJE74035.1| RNase III inhibitor [Escherichia coli O111:H8 str. CVM9634]
gi|394402165|gb|EJE77906.1| RNase III inhibitor [Escherichia coli O26:H11 str. CVM10021]
gi|394406765|gb|EJE81712.1| RNase III inhibitor [Escherichia coli O111:H11 str. CVM9455]
gi|394418166|gb|EJE91866.1| RNase III inhibitor [Escherichia coli O26:H11 str. CVM10030]
gi|394433147|gb|EJF05206.1| RNase III inhibitor [Escherichia coli O26:H11 str. CVM9952]
gi|397785783|gb|EJK96626.1| macro domain protein [Escherichia coli STEC_O31]
gi|406778310|gb|AFS57734.1| RNase III inhibitor [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407054893|gb|AFS74944.1| RNase III inhibitor [Escherichia coli O104:H4 str. 2011C-3493]
gi|407064709|gb|AFS85756.1| RNase III inhibitor [Escherichia coli O104:H4 str. 2009EL-2071]
gi|408304267|gb|EKJ21696.1| RNase III regulator YmdB [Escherichia coli EC1865]
gi|408346409|gb|EKJ60704.1| RNase III regulator YmdB [Escherichia coli 0.1288]
gi|412962383|emb|CCK46297.1| putative polyprotein [Escherichia coli chi7122]
gi|412968961|emb|CCJ43588.1| putative polyprotein [Escherichia coli]
gi|421942805|gb|EKU00123.1| RNase III inhibitor [Escherichia coli O26:H11 str. CFSAN001629]
gi|421947378|gb|EKU04456.1| RNase III inhibitor [Escherichia coli O111:H8 str. CFSAN001632]
gi|421950373|gb|EKU07247.1| RNase III inhibitor [Escherichia coli O111:H11 str. CFSAN001630]
gi|429355317|gb|EKY92007.1| hypothetical protein C212_00084 [Escherichia coli O104:H4 str.
11-02030]
gi|429359229|gb|EKY95894.1| hypothetical protein C214_00083 [Escherichia coli O104:H4 str.
11-02092]
gi|429363130|gb|EKY99773.1| hypothetical protein C213_00082 [Escherichia coli O104:H4 str.
11-02033-1]
gi|429373477|gb|EKZ10021.1| hypothetical protein C215_00082 [Escherichia coli O104:H4 str.
11-02093]
gi|429377218|gb|EKZ13742.1| hypothetical protein C216_00083 [Escherichia coli O104:H4 str.
11-02281]
gi|429378822|gb|EKZ15329.1| hypothetical protein C217_00083 [Escherichia coli O104:H4 str.
11-02318]
gi|429388106|gb|EKZ24532.1| hypothetical protein C219_00084 [Escherichia coli O104:H4 str.
11-03439]
gi|429389969|gb|EKZ26385.1| hypothetical protein C218_00082 [Escherichia coli O104:H4 str.
11-02913]
gi|429393808|gb|EKZ30195.1| hypothetical protein C221_00082 [Escherichia coli O104:H4 str.
11-03943]
gi|429395111|gb|EKZ31479.1| hypothetical protein MO3_01500 [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429403795|gb|EKZ40076.1| hypothetical protein C220_00083 [Escherichia coli O104:H4 str.
11-04080]
gi|429404913|gb|EKZ41180.1| hypothetical protein MO5_04293 [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429408901|gb|EKZ45135.1| hypothetical protein O7C_04798 [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429416976|gb|EKZ53127.1| hypothetical protein O7I_04481 [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429421804|gb|EKZ57925.1| hypothetical protein O7K_01017 [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429423545|gb|EKZ59653.1| hypothetical protein O7G_00568 [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429425616|gb|EKZ61705.1| hypothetical protein O7M_01567 [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429432703|gb|EKZ68740.1| hypothetical protein O7E_04800 [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429442611|gb|EKZ78567.1| hypothetical protein O7O_04106 [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429447515|gb|EKZ83433.1| hypothetical protein S91_04884 [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429452170|gb|EKZ88056.1| hypothetical protein S7Y_01558 [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429454567|gb|EKZ90426.1| hypothetical protein MO7_02416 [Escherichia coli O104:H4 str.
Ec11-9941]
gi|431009418|gb|ELD24038.1| hypothetical protein A15U_01586 [Escherichia coli KTE210]
gi|431298812|gb|ELF88436.1| hypothetical protein WEQ_00937 [Escherichia coli KTE29]
gi|431312255|gb|ELG00259.1| hypothetical protein A1S5_01972 [Escherichia coli KTE48]
gi|431356354|gb|ELG43045.1| hypothetical protein A1WM_04332 [Escherichia coli KTE101]
gi|431379364|gb|ELG64298.1| hypothetical protein A1YM_02810 [Escherichia coli KTE135]
gi|431660709|gb|ELJ27574.1| hypothetical protein WKI_01166 [Escherichia coli KTE166]
gi|443421666|gb|AGC86570.1| RNase III inhibitor [Escherichia coli APEC O78]
gi|449320921|gb|EMD10940.1| RNase III inhibitor [Escherichia coli O08]
Length = 177
Score = 42.4 bits (98), Expect = 0.76, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGALP------AKAVVHTVGP 84
>gi|415877462|ref|ZP_11543597.1| RNase III regulator YmdB [Escherichia coli MS 79-10]
gi|433091371|ref|ZP_20277663.1| hypothetical protein WK1_01018 [Escherichia coli KTE138]
gi|342927951|gb|EGU96673.1| RNase III regulator YmdB [Escherichia coli MS 79-10]
gi|431612912|gb|ELI82117.1| hypothetical protein WK1_01018 [Escherichia coli KTE138]
Length = 177
Score = 42.4 bits (98), Expect = 0.77, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGALP------AKAVVHTVGP 84
>gi|123503380|ref|XP_001328499.1| Appr-1-p processing enzyme family protein [Trichomonas vaginalis
G3]
gi|121911443|gb|EAY16276.1| Appr-1-p processing enzyme family protein [Trichomonas vaginalis
G3]
Length = 316
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 73/167 (43%), Gaps = 47/167 (28%)
Query: 316 LVLVDL----TQGSK-----ILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVI 366
+ L DL QGSK I S V A IN K F GD T+L C+ I
Sbjct: 18 VTLADLPTWDVQGSKLDAKQIPSCVPKYAPNTEINKKISFWMGGDSTKLK------CDAI 71
Query: 367 ANAANWRLKPGGGGVNAAIFSAAG-PALEVATAERAKSLYPGNSVIVP---LPSTSPLCG 422
NAAN L GGG+ AIFSAAG L+ A E+ + G + + P LPS
Sbjct: 72 VNAANSYLA-AGGGICGAIFSAAGYEELQKACDEQGYTE-TGGAKMTPGFRLPS------ 123
Query: 423 REGVTHVIHVLGP-NMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFL 468
+VIH +GP ++P E LR AY +L GF+
Sbjct: 124 ----KYVIHAVGPVGVHP--------------EALRSAY-NLTLGFM 151
>gi|395227708|ref|ZP_10406034.1| UPF0189 protein ymdB [Citrobacter sp. A1]
gi|421844265|ref|ZP_16277423.1| hypothetical protein D186_04490 [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|424728589|ref|ZP_18157194.1| protein ymdb [Citrobacter sp. L17]
gi|394719036|gb|EJF24657.1| UPF0189 protein ymdB [Citrobacter sp. A1]
gi|411774420|gb|EKS57910.1| hypothetical protein D186_04490 [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|422896460|gb|EKU36242.1| protein ymdb [Citrobacter sp. L17]
gi|455642287|gb|EMF21453.1| hypothetical protein H262_17656 [Citrobacter freundii GTC 09479]
Length = 180
Score = 42.4 bits (98), Expect = 0.79, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE--RAKSLYPG 407
GDIT + +VI NAAN L GGGGV+ AI AAGPAL A + + + P
Sbjct: 10 GDITTI------AVDVIVNAANPSLL-GGGGVDGAIHRAAGPALLAACKQVIQQQGECPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P VIH +GP
Sbjct: 63 GHAVITLAGNLP------ARAVIHTVGP 84
>gi|325972400|ref|YP_004248591.1| Appr-1-p processing protein [Sphaerochaeta globus str. Buddy]
gi|324027638|gb|ADY14397.1| Appr-1-p processing domain protein [Sphaerochaeta globus str.
Buddy]
Length = 324
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 42/91 (46%), Gaps = 14/91 (15%)
Query: 345 FFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSL 404
FF DIT L T + I NAAN LK GGG V AIF AAG + E +
Sbjct: 3 FFLIKKDITTLRT------DAIVNAANTALKMGGG-VCGAIFKAAGIEAMQSACEALSPI 55
Query: 405 YPGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G +V+ P + S T+VIH GP
Sbjct: 56 NIGEAVLTPGFNLS-------ATYVIHTAGP 79
>gi|296130962|ref|YP_003638212.1| metallophosphoesterase [Cellulomonas flavigena DSM 20109]
gi|296022777|gb|ADG76013.1| metallophosphoesterase [Cellulomonas flavigena DSM 20109]
Length = 857
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 85/208 (40%), Gaps = 24/208 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV++VG GSGKSTF + C+ D ++ + L A L
Sbjct: 11 LVVLVGVSGSGKSTFAARHFGPFETLSSDFCRGLVSNDVTSQDATAAAFDVLHHIAGKRL 70
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
G +D N+E R V L +V A+VLD+P +C+ R+ R + +
Sbjct: 71 DAGLLTVVDATNVEPTARKQLVALARAHDVLPVAIVLDIPEPVCLERNAARAD-----RT 125
Query: 135 GKAAAVVNRMLQ-KKELPKLS-EGFSRITLCQNENDVQAAL--------DTYSGLGPLDT 184
A AV + Q ++ L L EGF + + Q ++V AA D GP D
Sbjct: 126 LPAHAVRRQRDQLRRSLRGLGREGFRTVHVLQGTDEVDAATIVREPLRSDRREERGPFDV 185
Query: 185 LPHGSFGQKNPDAKIQLGIMKFLKKVDA 212
+ G + + LG + ++ + DA
Sbjct: 186 V--GDVHGCRAELETLLGALGYVIERDA 211
>gi|427731885|ref|YP_007078122.1| polynucleotide kinase-phosphatase [Nostoc sp. PCC 7524]
gi|427367804|gb|AFY50525.1| polynucleotide kinase-phosphatase [Nostoc sp. PCC 7524]
Length = 866
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 22 LVIMVGAPGSGKSTFC-EHV----MRSSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
L+I++GA G+GKSTF +H + SS + D N+ S L A+ L
Sbjct: 10 LIILIGASGAGKSTFARQHFPPFEVLSSDFCRGLVSNDENNQSASKDAFDVLHYIAAKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
GK +D N++ E R +++ A+V DLP +LC R+ +R N
Sbjct: 70 AVGKLTVIDATNVQAEDRKILLQMAKQYHYFAVAIVFDLPEELCHDRNQQR----SNRNF 125
Query: 135 GKAAAVVNRMLQKKELPKLS-EGFSRITLCQNENDV 169
G + + ++ L L EGF + ++ ++
Sbjct: 126 GPHVVRRHTQMLRRSLHSLEKEGFRYVYTLKSVEEI 161
>gi|333918717|ref|YP_004492298.1| RNase III regulator YmdB [Amycolicicoccus subflavus DQS3-9A1]
gi|333480938|gb|AEF39498.1| RNase III regulator YmdB [Amycolicicoccus subflavus DQS3-9A1]
Length = 173
Score = 42.4 bits (98), Expect = 0.81, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 51/115 (44%), Gaps = 18/115 (15%)
Query: 348 FVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPG 407
+ GDIT+ T + I NAAN L GGGGV+ AI A GPA+ E + +P
Sbjct: 6 YQGDITQAET------DAIVNAANSSLL-GGGGVDGAIHRAGGPAILRDCQEIRATTFP- 57
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTS 462
S + P + + G VIH +GP + +ILR AY S
Sbjct: 58 -SGLPPGKAIATTAGDLSARWVIHTVGPVYSASEDR---------SDILRSAYLS 102
>gi|426341832|ref|XP_004036227.1| PREDICTED: poly [ADP-ribose] polymerase 14 [Gorilla gorilla
gorilla]
Length = 1801
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV---ATAERAKSLYP 406
GD+ RL +V+ NA+N LK GG+ AA+ AAGP L+ +R + P
Sbjct: 809 GDLARL------PVDVVVNASNEDLK-HHGGLAAALSKAAGPELQADCDQIVKREGRILP 861
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRR-PNCL 445
GN+ I G+ HVIH +GP + P C+
Sbjct: 862 GNATISK-------AGKLPYHHVIHAVGPRWSGYEAPRCV 894
>gi|401763156|ref|YP_006578163.1| hypothetical protein ECENHK_08310 [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|400174690|gb|AFP69539.1| hypothetical protein ECENHK_08310 [Enterobacter cloacae subsp.
cloacae ENHKU01]
Length = 180
Score = 42.4 bits (98), Expect = 0.84, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 43/89 (48%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDIT + +VI NAAN L GGGGV+ AI AAGP L A ++ P
Sbjct: 10 GDITTQHV------DVIVNAANPSLM-GGGGVDGAIHRAAGPQLLEACKIVRQQQGECPP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI L G VIH +GP
Sbjct: 63 GHAVIT-------LAGNLPAKAVIHAVGP 84
>gi|294625384|ref|ZP_06704017.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292600302|gb|EFF44406.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 150
Score = 42.4 bits (98), Expect = 0.84, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 53/127 (41%), Gaps = 11/127 (8%)
Query: 318 LVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPG 377
+ D Q +L + R + + + GDIT L +VI NAAN L G
Sbjct: 1 MADSVQIRSVLPITRPSCNSHNYRAMRIEVWQGDITELDV------DVIVNAANESLL-G 53
Query: 378 GGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGRE-GVTHVIHVLGPN 436
GGGV+ AI AAGP L + E + PG V P G + H+ H +GP
Sbjct: 54 GGGVDGAIHRAAGPRL-LEACEALPQVRPG--VRCPTGEIRITDGFDLKARHIFHTVGPV 110
Query: 437 MNPRRPN 443
R N
Sbjct: 111 WRDGRHN 117
>gi|386858146|ref|YP_006262323.1| hypothetical protein DGo_CA2938 [Deinococcus gobiensis I-0]
gi|380001675|gb|AFD26865.1| UPF0189 protein [Deinococcus gobiensis I-0]
Length = 168
Score = 42.4 bits (98), Expect = 0.85, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 44/87 (50%), Gaps = 14/87 (16%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYP-GN 408
GDI +T + + AAN +L GGGGV+ I AAGP E+ A RA P G
Sbjct: 3 GDIAAQHT------DAVVTAANRQLM-GGGGVDGVIHRAAGP--ELLRAIRAIGGTPTGT 53
Query: 409 SVIVPLPSTSPLCGREGVTHVIHVLGP 435
+VI P + R GV VIH +GP
Sbjct: 54 AVITPAFGLA----RLGVRFVIHAVGP 76
>gi|256848434|ref|ZP_05553876.1| appr-1-p processing domain-containing protein [Lactobacillus
coleohominis 101-4-CHN]
gi|256714701|gb|EEU29680.1| appr-1-p processing domain-containing protein [Lactobacillus
coleohominis 101-4-CHN]
Length = 171
Score = 42.4 bits (98), Expect = 0.85, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA 396
GDIT+ C+ I NAAN L GGGGV+ AI AAGPAL A
Sbjct: 9 GDITKFQ------CDAIVNAANTTLM-GGGGVDGAIHRAAGPALYTA 48
>gi|108803337|ref|YP_643274.1| kinase-like protein [Rubrobacter xylanophilus DSM 9941]
gi|108764580|gb|ABG03462.1| kinase-like protein [Rubrobacter xylanophilus DSM 9941]
Length = 155
Score = 42.4 bits (98), Expect = 0.85, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 16/113 (14%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTK----------VQCLTSA 71
L +M G P SGK+T+ + R W R+C D I + G S
Sbjct: 14 LALMCGLPKSGKTTYARGLQE---RGWVRVCPDEIRRALHGRGHYPPAEPVVWANAELSV 70
Query: 72 SSALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAV--VLDLPAKLCISRS 122
+ L G V LD N R +R +++L E+ V A+ VL P + C+ R+
Sbjct: 71 RALLLGGHRVVLDATNTTRHRRAPWLRL-ARELGVPALAYVLRTPREECLRRN 122
>gi|427564452|ref|ZP_18931740.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|427584161|ref|ZP_18936539.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|414034965|gb|EKT17871.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|414036340|gb|EKT19176.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
Length = 162
Score = 42.4 bits (98), Expect = 0.87, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYPGNSVIVPLPSTSPL 420
+ I NAAN L GGGGV+ AI AAGPAL A ++ G++VI P
Sbjct: 1 DAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKLIRQQQGECQTGHAVITP------- 52
Query: 421 CGREGVTHVIHVLGP 435
G+ VIH +GP
Sbjct: 53 AGKLSAKAVIHTVGP 67
>gi|427390284|ref|ZP_18884690.1| hypothetical protein HMPREF9233_00193 [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425733299|gb|EKU96105.1| hypothetical protein HMPREF9233_00193 [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 171
Score = 42.4 bits (98), Expect = 0.88, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 44/97 (45%), Gaps = 25/97 (25%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYP--- 406
GDIT L + I NAAN L GGGGV+ AI AAGP L + ++ YP
Sbjct: 10 GDITELRV------DAIVNAANSSLL-GGGGVDGAIHRAAGPELLAECRQIRRTRYPEGL 62
Query: 407 --GNSVIV---PLPSTSPLCGREGVTHVIHVLGPNMN 438
G +V+ LP VIH +GPN N
Sbjct: 63 PVGEAVVTGAYQLP----------CRWVIHTVGPNRN 89
>gi|157146265|ref|YP_001453584.1| hypothetical protein CKO_02022 [Citrobacter koseri ATCC BAA-895]
gi|334351223|sp|A8AI35.1|YMDB_CITK8 RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|157083470|gb|ABV13148.1| hypothetical protein CKO_02022 [Citrobacter koseri ATCC BAA-895]
Length = 177
Score = 42.4 bits (98), Expect = 0.88, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE--RAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGP L A + + + P
Sbjct: 10 GDITQLTV------DVIVNAANASLL-GGGGVDGAIHRAAGPTLLEACKKVRQQQGECPA 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P VIH +GP
Sbjct: 63 GHAVITLAGNLP------AKAVIHTVGP 84
>gi|154291294|ref|XP_001546231.1| hypothetical protein BC1G_15294 [Botryotinia fuckeliana B05.10]
Length = 474
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 363 CNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCG 422
+VI NAAN +LK GGG++ AI +AAGP L+ E + +PG + T+
Sbjct: 33 VDVIVNAANVKLK-KGGGIDGAIHAAAGPELQGEMNELFQ--HPGQ--VGGAYGTTSSWD 87
Query: 423 REGVTHVIHVLGPNMNPRRPNCLDGDYV 450
+ ++IH +GPN N P DG ++
Sbjct: 88 IQSCRYIIHAVGPNWN--IPEQQDGKFL 113
>gi|307719707|ref|YP_003875239.1| hypothetical protein STHERM_c20310 [Spirochaeta thermophila DSM
6192]
gi|306533432|gb|ADN02966.1| hypothetical protein STHERM_c20310 [Spirochaeta thermophila DSM
6192]
Length = 181
Score = 42.0 bits (97), Expect = 0.90, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 41/91 (45%), Gaps = 18/91 (19%)
Query: 366 IANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIV---PLPSTSPLCG 422
I NAAN L PGGG V AI AAGP L + + PG +VI LP+
Sbjct: 27 IVNAANAMLMPGGG-VAGAIHRAAGPGL-AEECRKYAPIKPGEAVITGGHNLPN------ 78
Query: 423 REGVTHVIHVLGPNMNPRRPNCLDGDYVKGC 453
+VIH LGP RP + D + C
Sbjct: 79 ----RYVIHTLGPVYGKDRP---EADLLSRC 102
>gi|392945527|ref|ZP_10311169.1| polynucleotide kinase-phosphatase [Frankia sp. QA3]
gi|392288821|gb|EIV94845.1| polynucleotide kinase-phosphatase [Frankia sp. QA3]
Length = 898
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 22/181 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV++VG GSGKSTF R++ + C+ D ++ + + L A L
Sbjct: 42 LVVLVGVSGSGKSTFARTHFRATEVISSDFCRGLVADDENDQSATPEAFELLRYIAGKRL 101
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D N++ + R V L E DV A+VLD+P +C +R+ R + +
Sbjct: 102 AAGRLTVIDATNVQPDARRPLVALAR-EHDVLPVAIVLDVPEGVCAARNANRPDRD---- 156
Query: 134 GGKAAAVVNRMLQKKELPKLS-EGFSRITLCQNENDVQAALDTYSGL--------GPLDT 184
G R ++ L L+ EGF + L + E ++ T + L GP D
Sbjct: 157 FGPHVLRRQRDQLRRGLRGLAREGFRTVHLLRGEREIADVAITRTPLFNDLRHETGPFDV 216
Query: 185 L 185
+
Sbjct: 217 I 217
>gi|302344059|ref|YP_003808588.1| Appr-1-p processing protein [Desulfarculus baarsii DSM 2075]
gi|301640672|gb|ADK85994.1| Appr-1-p processing domain protein [Desulfarculus baarsii DSM 2075]
Length = 176
Score = 42.0 bits (97), Expect = 0.91, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 338 KHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVAT 397
+ I P + +GDIT + I NAAN RL GGGGV+ AI A GPA+ +
Sbjct: 5 QQIGPTRLDLLLGDITTQVV------DAIVNAANSRLA-GGGGVDGAIHRAGGPAI-MEE 56
Query: 398 AERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
R G +V + G V VIH +GP
Sbjct: 57 CRRIGHCPTGQAV-------ATTGGLLAVKKVIHTVGP 87
>gi|51246238|ref|YP_066122.1| hypothetical protein DP2386 [Desulfotalea psychrophila LSv54]
gi|50877275|emb|CAG37115.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 176
Score = 42.0 bits (97), Expect = 0.93, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPL-CG 422
+VI NAAN RL GGGGV+ AI AAGP L A + A+ + V P G
Sbjct: 17 DVIVNAANPRLL-GGGGVDGAIHQAAGPTLLDACMKIAEK----DGVRCPTGEARITGAG 71
Query: 423 REGVTHVIHVLGP 435
R +VIH +GP
Sbjct: 72 RLAAKYVIHTVGP 84
>gi|328873462|gb|EGG21829.1| histidine triad family protein [Dictyostelium fasciculatum]
Length = 450
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 552 STSKAWGSWAQALYRTAMYPERHKDDLLEISDDVVVLNDLYPK 594
STSK GSW+ AL PE HKD ++ D VV++ D+YPK
Sbjct: 262 STSKGKGSWSDALLPYCDDPEGHKDVVVWYDDQVVLIKDVYPK 304
>gi|302417972|ref|XP_003006817.1| bifunctional polynucleotide phosphatase/kinase [Verticillium
albo-atrum VaMs.102]
gi|261354419|gb|EEY16847.1| bifunctional polynucleotide phosphatase/kinase [Verticillium
albo-atrum VaMs.102]
Length = 477
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 70/172 (40%), Gaps = 32/172 (18%)
Query: 15 EKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSA 74
EKK KQ +V+ G PG+GKSTF ++ + R+ QD + T+ +C+ +A
Sbjct: 292 EKKNKQDVVLFCGPPGAGKSTFYWRQLQPLG--YERVNQDILK-----TRDKCVKTAREL 344
Query: 75 LKKGKSVFL---------------------DRCNLEREQRTDFVKLGGP-EVDVHAVVLD 112
L+ GKSV + D N + + R +V L +V V V
Sbjct: 345 LQGGKSVAIGTSRPMARDEKQCVADKTCPPDNTNADPDTRAVWVNLAKQHDVPVRCVWFK 404
Query: 113 LPAKLCISRSVKR-IEHEGNLQGGKAAA--VVNRMLQKKELPKLSEGFSRIT 161
P +C V R + + N + A N + PK EGF +T
Sbjct: 405 TPLFVCEHNDVVRALNTKMNPESRTALPQLAFNGFKSRFREPKAKEGFQDVT 456
>gi|34499018|ref|NP_903233.1| hypothetical protein CV_3563 [Chromobacterium violaceum ATCC 12472]
gi|34104868|gb|AAQ61225.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 170
Score = 42.0 bits (97), Expect = 0.95, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 28/44 (63%), Gaps = 7/44 (15%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL 393
GDITR+ + I NAAN RL GGGGV+ AI AAGPAL
Sbjct: 10 GDITRMRV------DAIVNAANSRLL-GGGGVDGAIHRAAGPAL 46
>gi|420335332|ref|ZP_14836943.1| hypothetical protein SFK315_1091 [Shigella flexneri K-315]
gi|391266017|gb|EIQ24980.1| hypothetical protein SFK315_1091 [Shigella flexneri K-315]
Length = 177
Score = 42.0 bits (97), Expect = 0.95, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGDLP------AKAVVHTVGP 84
>gi|187730705|ref|YP_001880784.1| hypothetical protein SbBS512_E2286 [Shigella boydii CDC 3083-94]
gi|187427697|gb|ACD06971.1| appr-1-p processing enzyme domain protein [Shigella boydii CDC
3083-94]
Length = 177
Score = 42.0 bits (97), Expect = 0.95, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI L G V+H +GP
Sbjct: 63 GHTVIT-------LAGDLPAKAVVHTVGP 84
>gi|420373762|ref|ZP_14873825.1| hypothetical protein SF123566_3830 [Shigella flexneri 1235-66]
gi|391316785|gb|EIQ74170.1| hypothetical protein SF123566_3830 [Shigella flexneri 1235-66]
Length = 180
Score = 42.0 bits (97), Expect = 0.96, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE--RAKSLYPG 407
GDIT + +VI NAAN L GGGGV+ AI AAGPAL A + + + P
Sbjct: 10 GDIT------AIAVDVIVNAANSSLL-GGGGVDGAIHRAAGPALLEACKQVLQQQGECPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P VIH +GP
Sbjct: 63 GHAVITLAGNLP------AKAVIHTVGP 84
>gi|317483074|ref|ZP_07942075.1| macro domain-containing protein [Bifidobacterium sp. 12_1_47BFAA]
gi|419848589|ref|ZP_14371683.1| macro domain protein [Bifidobacterium longum subsp. longum 1-6B]
gi|291516668|emb|CBK70284.1| Predicted phosphatase homologous to the C-terminal domain of
histone macroH2A1 [Bifidobacterium longum subsp. longum
F8]
gi|316915480|gb|EFV36901.1| macro domain-containing protein [Bifidobacterium sp. 12_1_47BFAA]
gi|386407349|gb|EIJ22326.1| macro domain protein [Bifidobacterium longum subsp. longum 1-6B]
Length = 367
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 14/75 (18%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVP---LPSTSPL 420
+ I NAAN +L GGGV AIF AAG + A +R ++ G +VI P LPS
Sbjct: 16 DAIVNAANTQLA-MGGGVCGAIFRAAGVSRMAAACDRFAPIHTGEAVITPGFNLPS---- 70
Query: 421 CGREGVTHVIHVLGP 435
+VIH GP
Sbjct: 71 ------RYVIHTAGP 79
>gi|391330464|ref|XP_003739680.1| PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2-like
[Metaseiulus occidentalis]
Length = 229
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 310 KLGNARLVLVDLT------QGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCC 363
K G +VL DLT + + V K + + +K F GDIT L G
Sbjct: 21 KCGKKYVVLEDLTDWPSYARQHRCGKKVETKWSADSLLNRKICIFEGDITTLEIDG---- 76
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPAL 393
I NAAN RL GGGGV+ AI AAGP L
Sbjct: 77 --IVNAANNRLL-GGGGVDGAIHKAAGPQL 103
>gi|384201246|ref|YP_005586993.1| hypothetical protein BLNIAS_01005 [Bifidobacterium longum subsp.
longum KACC 91563]
gi|338754253|gb|AEI97242.1| hypothetical protein BLNIAS_01005 [Bifidobacterium longum subsp.
longum KACC 91563]
Length = 367
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 14/75 (18%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVP---LPSTSPL 420
+ I NAAN +L GGGV AIF AAG + A +R ++ G +VI P LPS
Sbjct: 16 DAIVNAANTQLA-MGGGVCGAIFRAAGVSRMAAACDRFAPIHTGEAVITPGFNLPS---- 70
Query: 421 CGREGVTHVIHVLGP 435
+VIH GP
Sbjct: 71 ------RYVIHTAGP 79
>gi|397509689|ref|XP_003825249.1| PREDICTED: poly [ADP-ribose] polymerase 14 [Pan paniscus]
Length = 1801
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 361 LCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV---ATAERAKSLYPGNSVIVPLPST 417
L +V+ NA+N LK GG+ AA+ AAGP L+ +R L PGN+ I
Sbjct: 814 LPVDVVVNASNEDLK-HYGGLAAALSKAAGPELQADCDQIVKREGRLLPGNATISK---- 868
Query: 418 SPLCGREGVTHVIHVLGPNMNPRR-PNCL 445
G+ HVIH +GP + P C+
Sbjct: 869 ---AGKLPYHHVIHAVGPRWSGYEAPRCV 894
>gi|332817639|ref|XP_516695.3| PREDICTED: poly [ADP-ribose] polymerase 14 [Pan troglodytes]
gi|410226654|gb|JAA10546.1| poly (ADP-ribose) polymerase family, member 14 [Pan troglodytes]
gi|410254046|gb|JAA14990.1| poly (ADP-ribose) polymerase family, member 14 [Pan troglodytes]
gi|410298888|gb|JAA28044.1| poly (ADP-ribose) polymerase family, member 14 [Pan troglodytes]
gi|410355645|gb|JAA44426.1| poly (ADP-ribose) polymerase family, member 14 [Pan troglodytes]
Length = 1801
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 361 LCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV---ATAERAKSLYPGNSVIVPLPST 417
L +V+ NA+N LK GG+ AA+ AAGP L+ +R L PGN+ I
Sbjct: 814 LPVDVVVNASNEDLK-HYGGLAAALSKAAGPELQADCDQIVKREGRLLPGNATISK---- 868
Query: 418 SPLCGREGVTHVIHVLGPNMNPRR-PNCL 445
G+ HVIH +GP + P C+
Sbjct: 869 ---AGKLPYHHVIHAVGPRWSGYEAPRCV 894
>gi|312132487|ref|YP_003999826.1| protein [Bifidobacterium longum subsp. longum BBMN68]
gi|311773415|gb|ADQ02903.1| Hypothetical protein BBMN68_212 [Bifidobacterium longum subsp.
longum BBMN68]
Length = 367
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 14/75 (18%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVP---LPSTSPL 420
+ I NAAN +L GGGV AIF AAG + A +R ++ G +VI P LPS
Sbjct: 16 DAIVNAANTQLA-MGGGVCGAIFRAAGVSRMAAACDRFAPIHTGEAVITPGFNLPS---- 70
Query: 421 CGREGVTHVIHVLGP 435
+VIH GP
Sbjct: 71 ------RYVIHTAGP 79
>gi|386719754|ref|YP_006186080.1| Macro domain, possibly ADP-ribose binding module [Stenotrophomonas
maltophilia D457]
gi|384079316|emb|CCH13914.1| Macro domain, possibly ADP-ribose binding module [Stenotrophomonas
maltophilia D457]
Length = 199
Score = 42.0 bits (97), Expect = 1.0, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 44/89 (49%), Gaps = 15/89 (16%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPG-- 407
GDIT L + I NAAN L GGGGV+ AI AAGPAL +A + L PG
Sbjct: 8 GDITTL------AVDAIVNAANETLL-GGGGVDGAIHRAAGPAL-LAECAQLPELRPGVR 59
Query: 408 -NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
+ V S L R HV+H +GP
Sbjct: 60 CPTGEVRATSAHALPAR----HVLHTVGP 84
>gi|331672566|ref|ZP_08373355.1| RNase III regulator YmdB [Escherichia coli TA280]
gi|417137388|ref|ZP_11981178.1| macro domain protein [Escherichia coli 97.0259]
gi|417307505|ref|ZP_12094372.1| hypothetical protein PPECC33_9440 [Escherichia coli PCN033]
gi|422970983|ref|ZP_16974495.1| UPF0189 protein ymdB [Escherichia coli TA124]
gi|432542415|ref|ZP_19779271.1| hypothetical protein A197_00996 [Escherichia coli KTE236]
gi|432547885|ref|ZP_19784672.1| hypothetical protein A199_01352 [Escherichia coli KTE237]
gi|432621169|ref|ZP_19857210.1| hypothetical protein A1UO_01041 [Escherichia coli KTE76]
gi|432814679|ref|ZP_20048469.1| hypothetical protein A1Y1_01080 [Escherichia coli KTE115]
gi|331070209|gb|EGI41575.1| RNase III regulator YmdB [Escherichia coli TA280]
gi|338770881|gb|EGP25634.1| hypothetical protein PPECC33_9440 [Escherichia coli PCN033]
gi|371599364|gb|EHN88153.1| UPF0189 protein ymdB [Escherichia coli TA124]
gi|386158952|gb|EIH15285.1| macro domain protein [Escherichia coli 97.0259]
gi|431076669|gb|ELD84164.1| hypothetical protein A197_00996 [Escherichia coli KTE236]
gi|431083821|gb|ELD89993.1| hypothetical protein A199_01352 [Escherichia coli KTE237]
gi|431161635|gb|ELE62106.1| hypothetical protein A1UO_01041 [Escherichia coli KTE76]
gi|431366902|gb|ELG53399.1| hypothetical protein A1Y1_01080 [Escherichia coli KTE115]
Length = 177
Score = 42.0 bits (97), Expect = 1.0, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGDLP------AKAVVHTVGP 84
>gi|301023215|ref|ZP_07187014.1| RNase III regulator YmdB [Escherichia coli MS 69-1]
gi|419918170|ref|ZP_14436382.1| hypothetical protein ECKD2_09319 [Escherichia coli KD2]
gi|300397139|gb|EFJ80677.1| RNase III regulator YmdB [Escherichia coli MS 69-1]
gi|388391969|gb|EIL53406.1| hypothetical protein ECKD2_09319 [Escherichia coli KD2]
Length = 177
Score = 42.0 bits (97), Expect = 1.0, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGDLP------AKAVVHTVGP 84
>gi|226467758|emb|CAX69755.1| Pre-mRNA-processing-splicing factor 8 [Schistosoma japonicum]
Length = 177
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 21/89 (23%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT L + IANAAN +L+ GGGGV+ AI AAGP L VA ++ G++
Sbjct: 34 GDITHLRI------DAIANAANRQLR-GGGGVDGAIHRAAGPELLVA-CQKLGGCPTGDA 85
Query: 410 VIVP---LPSTSPLCGREGVTHVIHVLGP 435
+ P LPS +VIH +GP
Sbjct: 86 KLTPGFNLPS----------KYVIHCVGP 104
>gi|366158732|ref|ZP_09458594.1| RNase III inhibitor [Escherichia sp. TW09308]
gi|432371770|ref|ZP_19614820.1| hypothetical protein WCO_00795 [Escherichia coli KTE11]
gi|430898099|gb|ELC20234.1| hypothetical protein WCO_00795 [Escherichia coli KTE11]
Length = 177
Score = 42.0 bits (97), Expect = 1.0, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGDLP------AKAVVHTVGP 84
>gi|157160570|ref|YP_001457888.1| hypothetical protein EcHS_A1166 [Escherichia coli HS]
gi|188492778|ref|ZP_03000048.1| appr-1-p processing enzyme domain protein [Escherichia coli 53638]
gi|312971180|ref|ZP_07785358.1| macro domain protein [Escherichia coli 1827-70]
gi|386613419|ref|YP_006133085.1| RNase III regulator YmdB [Escherichia coli UMNK88]
gi|419174656|ref|ZP_13718507.1| regulator of RNase III activity [Escherichia coli DEC7B]
gi|157066250|gb|ABV05505.1| appr-1-p processing enzyme domain protein [Escherichia coli HS]
gi|188487977|gb|EDU63080.1| appr-1-p processing enzyme domain protein [Escherichia coli 53638]
gi|310336382|gb|EFQ01568.1| macro domain protein [Escherichia coli 1827-70]
gi|332342588|gb|AEE55922.1| RNase III regulator YmdB [Escherichia coli UMNK88]
gi|378036510|gb|EHV99053.1| regulator of RNase III activity [Escherichia coli DEC7B]
Length = 177
Score = 42.0 bits (97), Expect = 1.0, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGDLP------AKAVVHTVGP 84
>gi|15801162|ref|NP_287179.1| hypothetical protein Z1679 [Escherichia coli O157:H7 str. EDL933]
gi|15830677|ref|NP_309450.1| hypothetical protein ECs1423 [Escherichia coli O157:H7 str. Sakai]
gi|16129008|ref|NP_415563.1| O-acetyl-ADP-ribose deacetylase; RNase III inhibitor during cold
shock [Escherichia coli str. K-12 substr. MG1655]
gi|26247182|ref|NP_753222.1| hypothetical protein c1309 [Escherichia coli CFT073]
gi|74311600|ref|YP_310019.1| hypothetical protein SSON_1058 [Shigella sonnei Ss046]
gi|82544488|ref|YP_408435.1| hypothetical protein SBO_2021 [Shigella boydii Sb227]
gi|91210195|ref|YP_540181.1| hypothetical protein UTI89_C1168 [Escherichia coli UTI89]
gi|110641222|ref|YP_668952.1| hypothetical protein ECP_1038 [Escherichia coli 536]
gi|117623234|ref|YP_852147.1| hypothetical protein APECO1_130 [Escherichia coli APEC O1]
gi|157155706|ref|YP_001462277.1| hypothetical protein EcE24377A_1165 [Escherichia coli E24377A]
gi|168747185|ref|ZP_02772207.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4113]
gi|168754523|ref|ZP_02779530.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4401]
gi|168760616|ref|ZP_02785623.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4501]
gi|168767701|ref|ZP_02792708.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4486]
gi|168773887|ref|ZP_02798894.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4196]
gi|168783572|ref|ZP_02808579.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4076]
gi|168789977|ref|ZP_02814984.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC869]
gi|168799321|ref|ZP_02824328.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC508]
gi|170020558|ref|YP_001725512.1| hypothetical protein EcolC_2554 [Escherichia coli ATCC 8739]
gi|170080697|ref|YP_001730017.1| hypothetical protein ECDH10B_1117 [Escherichia coli str. K-12
substr. DH10B]
gi|170681971|ref|YP_001744138.1| hypothetical protein EcSMS35_2086 [Escherichia coli SMS-3-5]
gi|191172390|ref|ZP_03033931.1| appr-1-p processing enzyme domain protein [Escherichia coli F11]
gi|193069434|ref|ZP_03050388.1| appr-1-p processing enzyme domain protein [Escherichia coli
E110019]
gi|194432462|ref|ZP_03064749.1| appr-1-p processing enzyme domain protein [Shigella dysenteriae
1012]
gi|194438062|ref|ZP_03070155.1| appr-1-p processing enzyme domain protein [Escherichia coli 101-1]
gi|195935434|ref|ZP_03080816.1| hypothetical protein EscherichcoliO157_03087 [Escherichia coli
O157:H7 str. EC4024]
gi|208805619|ref|ZP_03247956.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4206]
gi|208814926|ref|ZP_03256105.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4045]
gi|208822114|ref|ZP_03262433.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4042]
gi|209396250|ref|YP_002269893.1| hypothetical protein ECH74115_1425 [Escherichia coli O157:H7 str.
EC4115]
gi|215486255|ref|YP_002328686.1| hypothetical protein E2348C_1136 [Escherichia coli O127:H6 str.
E2348/69]
gi|217328173|ref|ZP_03444255.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. TW14588]
gi|218553623|ref|YP_002386536.1| hypothetical protein ECIAI1_1079 [Escherichia coli IAI1]
gi|218557926|ref|YP_002390839.1| hypothetical protein ECS88_1057 [Escherichia coli S88]
gi|218688998|ref|YP_002397210.1| hypothetical protein ECED1_1189 [Escherichia coli ED1a]
gi|218700452|ref|YP_002408081.1| hypothetical protein ECIAI39_2118 [Escherichia coli IAI39]
gi|222155794|ref|YP_002555933.1| hypothetical protein LF82_3536 [Escherichia coli LF82]
gi|227886599|ref|ZP_04004404.1| appr-1-p processing enzyme domain protein [Escherichia coli 83972]
gi|237706972|ref|ZP_04537453.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|238900300|ref|YP_002926096.1| hypothetical protein BWG_0894 [Escherichia coli BW2952]
gi|251784578|ref|YP_002998882.1| regulator of RNase III activity [Escherichia coli BL21(DE3)]
gi|253773930|ref|YP_003036761.1| hypothetical protein ECBD_2554 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161152|ref|YP_003044260.1| hypothetical protein ECB_01042 [Escherichia coli B str. REL606]
gi|254287960|ref|YP_003053708.1| hypothetical protein ECD_01042 [Escherichia coli BL21(DE3)]
gi|254792429|ref|YP_003077266.1| hypothetical protein ECSP_1347 [Escherichia coli O157:H7 str.
TW14359]
gi|261227050|ref|ZP_05941331.1| hypothetical protein EscherichiacoliO157_21009 [Escherichia coli
O157:H7 str. FRIK2000]
gi|261256284|ref|ZP_05948817.1| hypothetical protein EscherichiacoliO157EcO_10689 [Escherichia coli
O157:H7 str. FRIK966]
gi|291282065|ref|YP_003498883.1| hypothetical protein G2583_1304 [Escherichia coli O55:H7 str.
CB9615]
gi|293409416|ref|ZP_06652992.1| hypothetical protein ECEG_00351 [Escherichia coli B354]
gi|293414343|ref|ZP_06656992.1| ymdB protein [Escherichia coli B185]
gi|297517432|ref|ZP_06935818.1| hypothetical protein EcolOP_07300 [Escherichia coli OP50]
gi|300928406|ref|ZP_07143939.1| RNase III regulator YmdB [Escherichia coli MS 187-1]
gi|300950137|ref|ZP_07164082.1| RNase III regulator YmdB [Escherichia coli MS 116-1]
gi|300954420|ref|ZP_07166872.1| RNase III regulator YmdB [Escherichia coli MS 175-1]
gi|300974348|ref|ZP_07172560.1| RNase III regulator YmdB [Escherichia coli MS 45-1]
gi|300982653|ref|ZP_07176237.1| RNase III regulator YmdB [Escherichia coli MS 200-1]
gi|301029744|ref|ZP_07192798.1| RNase III regulator YmdB [Escherichia coli MS 196-1]
gi|301051172|ref|ZP_07198002.1| RNase III regulator YmdB [Escherichia coli MS 185-1]
gi|301644951|ref|ZP_07244919.1| RNase III regulator YmdB [Escherichia coli MS 146-1]
gi|306814107|ref|ZP_07448280.1| hypothetical protein ECNC101_18754 [Escherichia coli NC101]
gi|312968885|ref|ZP_07783092.1| macro domain protein [Escherichia coli 2362-75]
gi|331641586|ref|ZP_08342721.1| RNase III regulator YmdB [Escherichia coli H736]
gi|331646300|ref|ZP_08347403.1| RNase III regulator YmdB [Escherichia coli M605]
gi|331652096|ref|ZP_08353115.1| RNase III regulator YmdB [Escherichia coli M718]
gi|331657101|ref|ZP_08358063.1| RNase III regulator YmdB [Escherichia coli TA206]
gi|331682545|ref|ZP_08383164.1| RNase III regulator YmdB [Escherichia coli H299]
gi|383177695|ref|YP_005455700.1| RNase III inhibitor [Shigella sonnei 53G]
gi|386280156|ref|ZP_10057825.1| UPF0189 protein ymdB [Escherichia sp. 4_1_40B]
gi|386596125|ref|YP_006092525.1| Appr-1-p processing protein [Escherichia coli DH1]
gi|386598851|ref|YP_006100357.1| appr-1-p processing enzyme domain-containing protein [Escherichia
coli IHE3034]
gi|386605001|ref|YP_006111301.1| hypothetical protein UM146_12100 [Escherichia coli UM146]
gi|386618617|ref|YP_006138197.1| hypothetical protein ECNA114_1100 [Escherichia coli NA114]
gi|386623498|ref|YP_006143226.1| RNase III inhibitor during cold shock [Escherichia coli O7:K1 str.
CE10]
gi|386628680|ref|YP_006148400.1| hypothetical protein i02_1195 [Escherichia coli str. 'clone D i2']
gi|386633600|ref|YP_006153319.1| hypothetical protein i14_1195 [Escherichia coli str. 'clone D i14']
gi|386638556|ref|YP_006105354.1| putative polyprotein [Escherichia coli ABU 83972]
gi|386705233|ref|YP_006169080.1| hypothetical protein P12B_c2062 [Escherichia coli P12b]
gi|387506175|ref|YP_006158431.1| RNase III inhibitor [Escherichia coli O55:H7 str. RM12579]
gi|387611580|ref|YP_006114696.1| putative DNA and/or RNA unwinding protein [Escherichia coli ETEC
H10407]
gi|387616347|ref|YP_006119369.1| hypothetical protein NRG857_05040 [Escherichia coli O83:H1 str. NRG
857C]
gi|387620755|ref|YP_006128382.1| hypothetical protein ECDH1ME8569_0981 [Escherichia coli DH1]
gi|387828998|ref|YP_003348935.1| hypothetical protein ECSF_0945 [Escherichia coli SE15]
gi|387881928|ref|YP_006312230.1| hypothetical protein CDCO157_1359 [Escherichia coli Xuzhou21]
gi|388477126|ref|YP_489314.1| hypothetical protein Y75_p1016 [Escherichia coli str. K-12 substr.
W3110]
gi|404374366|ref|ZP_10979579.1| UPF0189 protein ymdB [Escherichia sp. 1_1_43]
gi|414576319|ref|ZP_11433506.1| hypothetical protein SS323385_2150 [Shigella sonnei 3233-85]
gi|415774333|ref|ZP_11486796.1| macro domain protein [Escherichia coli 3431]
gi|415809358|ref|ZP_11502128.1| macro domain protein [Escherichia coli LT-68]
gi|415837263|ref|ZP_11519429.1| macro domain protein [Escherichia coli RN587/1]
gi|415850565|ref|ZP_11527440.1| macro domain protein [Shigella sonnei 53G]
gi|416259678|ref|ZP_11640036.1| hypothetical protein SDB_00196 [Shigella dysenteriae CDC 74-1112]
gi|416296236|ref|ZP_11651368.1| hypothetical protein SGF_01790 [Shigella flexneri CDC 796-83]
gi|416310225|ref|ZP_11656328.1| RNase III regulator YmdB [Escherichia coli O157:H7 str. 1044]
gi|416321174|ref|ZP_11663316.1| hypothetical protein ECoD_03627 [Escherichia coli O157:H7 str.
EC1212]
gi|416330805|ref|ZP_11669703.1| hypothetical protein ECF_04686 [Escherichia coli O157:H7 str. 1125]
gi|416334938|ref|ZP_11671649.1| hypothetical protein EcoM_01015 [Escherichia coli WV_060327]
gi|416782205|ref|ZP_11877642.1| RNase III inhibitor [Escherichia coli O157:H7 str. G5101]
gi|416793404|ref|ZP_11882565.1| RNase III inhibitor [Escherichia coli O157:H- str. 493-89]
gi|416804670|ref|ZP_11887425.1| RNase III inhibitor [Escherichia coli O157:H- str. H 2687]
gi|416815792|ref|ZP_11892130.1| RNase III inhibitor [Escherichia coli O55:H7 str. 3256-97]
gi|416825609|ref|ZP_11896718.1| RNase III inhibitor [Escherichia coli O55:H7 str. USDA 5905]
gi|416836371|ref|ZP_11901986.1| RNase III inhibitor [Escherichia coli O157:H7 str. LSU-61]
gi|416897168|ref|ZP_11926938.1| macro domain protein [Escherichia coli STEC_7v]
gi|417083579|ref|ZP_11951624.1| hypothetical protein i01_01351 [Escherichia coli cloneA_i1]
gi|417112776|ref|ZP_11964696.1| macro domain protein [Escherichia coli 1.2741]
gi|417124685|ref|ZP_11973143.1| macro domain protein [Escherichia coli 97.0246]
gi|417130757|ref|ZP_11976028.1| macro domain protein [Escherichia coli 5.0588]
gi|417159012|ref|ZP_11996370.1| macro domain protein [Escherichia coli 99.0741]
gi|417226876|ref|ZP_12029070.1| macro domain protein [Escherichia coli 5.0959]
gi|417255199|ref|ZP_12046915.1| macro domain protein [Escherichia coli 2.3916]
gi|417274759|ref|ZP_12062099.1| macro domain protein [Escherichia coli 2.4168]
gi|417278460|ref|ZP_12065775.1| macro domain protein [Escherichia coli 3.2303]
gi|417283957|ref|ZP_12071254.1| macro domain protein [Escherichia coli 3003]
gi|417290024|ref|ZP_12077307.1| macro domain protein [Escherichia coli B41]
gi|417612267|ref|ZP_12262736.1| macro domain protein [Escherichia coli STEC_EH250]
gi|417617513|ref|ZP_12267941.1| macro domain protein [Escherichia coli G58-1]
gi|417628045|ref|ZP_12278292.1| macro domain protein [Escherichia coli STEC_MHI813]
gi|417633846|ref|ZP_12284062.1| macro domain protein [Escherichia coli STEC_S1191]
gi|417661638|ref|ZP_12311219.1| Macro domain, possibly ADP-ribose binding module [Escherichia coli
AA86]
gi|417672522|ref|ZP_12321989.1| macro domain protein [Shigella dysenteriae 155-74]
gi|417682605|ref|ZP_12331960.1| macro domain protein [Shigella boydii 3594-74]
gi|417706753|ref|ZP_12355803.1| macro domain protein [Shigella flexneri VA-6]
gi|417754967|ref|ZP_12403057.1| regulator of RNase III activity [Escherichia coli DEC2B]
gi|417827164|ref|ZP_12473734.1| regulator of RNase III activity [Shigella flexneri J1713]
gi|417944768|ref|ZP_12588008.1| RNase III inhibitor [Escherichia coli XH140A]
gi|417977203|ref|ZP_12617990.1| RNase III inhibitor [Escherichia coli XH001]
gi|418263571|ref|ZP_12884540.1| regulator of RNase III activity [Shigella sonnei str. Moseley]
gi|418302068|ref|ZP_12913862.1| macro domain protein [Escherichia coli UMNF18]
gi|418996180|ref|ZP_13543786.1| regulator of RNase III activity [Escherichia coli DEC1A]
gi|419001372|ref|ZP_13548920.1| regulator of RNase III activity [Escherichia coli DEC1B]
gi|419006830|ref|ZP_13554282.1| regulator of RNase III activity [Escherichia coli DEC1C]
gi|419017637|ref|ZP_13564955.1| regulator of RNase III activity [Escherichia coli DEC1E]
gi|419023267|ref|ZP_13570505.1| hypothetical protein ECDEC2A_1396 [Escherichia coli DEC2A]
gi|419028127|ref|ZP_13575316.1| regulator of RNase III activity [Escherichia coli DEC2C]
gi|419034016|ref|ZP_13581111.1| regulator of RNase III activity [Escherichia coli DEC2D]
gi|419038881|ref|ZP_13585933.1| regulator of RNase III activity [Escherichia coli DEC2E]
gi|419044620|ref|ZP_13591586.1| regulator of RNase III activity [Escherichia coli DEC3A]
gi|419049781|ref|ZP_13596696.1| regulator of RNase III activity [Escherichia coli DEC3B]
gi|419056261|ref|ZP_13603100.1| regulator of RNase III activity [Escherichia coli DEC3C]
gi|419061677|ref|ZP_13608443.1| regulator of RNase III activity [Escherichia coli DEC3D]
gi|419068351|ref|ZP_13614219.1| regulator of RNase III activity [Escherichia coli DEC3E]
gi|419074546|ref|ZP_13620105.1| regulator of RNase III activity [Escherichia coli DEC3F]
gi|419079697|ref|ZP_13625174.1| regulator of RNase III activity [Escherichia coli DEC4A]
gi|419085370|ref|ZP_13630767.1| regulator of RNase III activity [Escherichia coli DEC4B]
gi|419091318|ref|ZP_13636632.1| regulator of RNase III activity [Escherichia coli DEC4C]
gi|419097478|ref|ZP_13642711.1| regulator of RNase III activity [Escherichia coli DEC4D]
gi|419103151|ref|ZP_13648310.1| regulator of RNase III activity [Escherichia coli DEC4E]
gi|419108550|ref|ZP_13653647.1| regulator of RNase III activity [Escherichia coli DEC4F]
gi|419114004|ref|ZP_13659034.1| regulator of RNase III activity [Escherichia coli DEC5A]
gi|419119647|ref|ZP_13664625.1| regulator of RNase III activity [Escherichia coli DEC5B]
gi|419125253|ref|ZP_13670149.1| regulator of RNase III activity [Escherichia coli DEC5C]
gi|419130888|ref|ZP_13675735.1| regulator of RNase III activity [Escherichia coli DEC5D]
gi|419135690|ref|ZP_13680496.1| hypothetical protein ECDEC5E_1181 [Escherichia coli DEC5E]
gi|419141641|ref|ZP_13686391.1| hypothetical protein ECDEC6A_1283 [Escherichia coli DEC6A]
gi|419147610|ref|ZP_13692293.1| regulator of RNase III activity [Escherichia coli DEC6B]
gi|419153010|ref|ZP_13697592.1| hypothetical protein ECDEC6C_1175 [Escherichia coli DEC6C]
gi|419158394|ref|ZP_13702910.1| hypothetical protein ECDEC6D_1196 [Escherichia coli DEC6D]
gi|419163501|ref|ZP_13707968.1| regulator of RNase III activity [Escherichia coli DEC6E]
gi|419699891|ref|ZP_14227503.1| RNase III inhibitor [Escherichia coli SCI-07]
gi|419810995|ref|ZP_14335873.1| RNase III inhibitor [Escherichia coli O32:H37 str. P4]
gi|419864192|ref|ZP_14386675.1| RNase III inhibitor [Escherichia coli O103:H25 str. CVM9340]
gi|419925537|ref|ZP_14443375.1| hypothetical protein EC54115_20857 [Escherichia coli 541-15]
gi|419928481|ref|ZP_14446193.1| hypothetical protein EC5411_09675 [Escherichia coli 541-1]
gi|419940774|ref|ZP_14457497.1| hypothetical protein EC75_15759 [Escherichia coli 75]
gi|419944992|ref|ZP_14461452.1| hypothetical protein ECHM605_13186 [Escherichia coli HM605]
gi|420268568|ref|ZP_14770964.1| RNase III regulator YmdB [Escherichia coli PA22]
gi|420274533|ref|ZP_14776854.1| RNase III regulator YmdB [Escherichia coli PA40]
gi|420279600|ref|ZP_14781862.1| RNase III regulator YmdB [Escherichia coli TW06591]
gi|420285745|ref|ZP_14787956.1| RNase III regulator YmdB [Escherichia coli TW10246]
gi|420291542|ref|ZP_14793698.1| RNase III regulator YmdB [Escherichia coli TW11039]
gi|420297207|ref|ZP_14799291.1| RNase III regulator YmdB [Escherichia coli TW09109]
gi|420303385|ref|ZP_14805404.1| RNase III regulator YmdB [Escherichia coli TW10119]
gi|420308824|ref|ZP_14810786.1| RNase III regulator YmdB [Escherichia coli EC1738]
gi|420314212|ref|ZP_14816113.1| RNase III regulator YmdB [Escherichia coli EC1734]
gi|420319611|ref|ZP_14821456.1| hypothetical protein SF285071_1233 [Shigella flexneri 2850-71]
gi|420324721|ref|ZP_14826497.1| hypothetical protein SFCCH060_1048 [Shigella flexneri CCH060]
gi|420330467|ref|ZP_14832152.1| hypothetical protein SFK1770_1645 [Shigella flexneri K-1770]
gi|420347495|ref|ZP_14848893.1| hypothetical protein SB96558_2438 [Shigella boydii 965-58]
gi|420353265|ref|ZP_14854384.1| hypothetical protein SB444474_2329 [Shigella boydii 4444-74]
gi|420357837|ref|ZP_14858841.1| hypothetical protein SS322685_1642 [Shigella sonnei 3226-85]
gi|420364435|ref|ZP_14865314.1| regulator of RNase III activity [Shigella sonnei 4822-66]
gi|420381006|ref|ZP_14880461.1| hypothetical protein SD22575_2703 [Shigella dysenteriae 225-75]
gi|421681751|ref|ZP_16121573.1| regulator of RNase III activity [Shigella flexneri 1485-80]
gi|421776372|ref|ZP_16212976.1| hypothetical protein ECAD30_24850 [Escherichia coli AD30]
gi|421811456|ref|ZP_16247239.1| RNase III regulator YmdB [Escherichia coli 8.0416]
gi|421817614|ref|ZP_16253158.1| regulator of RNase III activity [Escherichia coli 10.0821]
gi|421823138|ref|ZP_16258559.1| RNase III regulator YmdB [Escherichia coli FRIK920]
gi|421829896|ref|ZP_16265217.1| RNase III regulator YmdB [Escherichia coli PA7]
gi|422358816|ref|ZP_16439465.1| RNase III regulator YmdB [Escherichia coli MS 110-3]
gi|422366214|ref|ZP_16446689.1| RNase III regulator YmdB [Escherichia coli MS 153-1]
gi|422371540|ref|ZP_16451917.1| RNase III regulator YmdB [Escherichia coli MS 16-3]
gi|422375356|ref|ZP_16455622.1| RNase III regulator YmdB [Escherichia coli MS 60-1]
gi|422380873|ref|ZP_16461046.1| RNase III regulator YmdB [Escherichia coli MS 57-2]
gi|422747924|ref|ZP_16801837.1| macro domain-containing protein [Escherichia coli H252]
gi|422753652|ref|ZP_16807479.1| macro domain-containing protein [Escherichia coli H263]
gi|422765612|ref|ZP_16819339.1| macro domain-containing protein [Escherichia coli E1520]
gi|422770276|ref|ZP_16823967.1| macro domain-containing protein [Escherichia coli E482]
gi|422782129|ref|ZP_16834914.1| macro domain-containing protein [Escherichia coli TW10509]
gi|422785631|ref|ZP_16838370.1| macro domain-containing protein [Escherichia coli H489]
gi|422790257|ref|ZP_16842962.1| macro domain-containing protein [Escherichia coli TA007]
gi|422800463|ref|ZP_16848961.1| macro domain-containing protein [Escherichia coli M863]
gi|422817682|ref|ZP_16865896.1| UPF0189 protein ymdB [Escherichia coli M919]
gi|422828699|ref|ZP_16876869.1| hypothetical protein ESNG_01374 [Escherichia coli B093]
gi|422833263|ref|ZP_16881330.1| hypothetical protein ESOG_00931 [Escherichia coli E101]
gi|422839506|ref|ZP_16887478.1| hypothetical protein ESPG_02164 [Escherichia coli H397]
gi|423684587|ref|ZP_17659421.1| RNase III regulator YmdB [Escherichia coli PA31]
gi|423701890|ref|ZP_17676349.1| UPF0189 protein ymdB [Escherichia coli H730]
gi|424076338|ref|ZP_17813595.1| RNase III regulator YmdB [Escherichia coli FDA505]
gi|424082691|ref|ZP_17819464.1| RNase III regulator YmdB [Escherichia coli FDA517]
gi|424089183|ref|ZP_17825379.1| RNase III regulator YmdB [Escherichia coli FRIK1996]
gi|424095574|ref|ZP_17831226.1| RNase III regulator YmdB [Escherichia coli FRIK1985]
gi|424101956|ref|ZP_17837025.1| RNase III regulator YmdB [Escherichia coli FRIK1990]
gi|424108746|ref|ZP_17843236.1| RNase III regulator YmdB [Escherichia coli 93-001]
gi|424114595|ref|ZP_17848665.1| RNase III regulator YmdB [Escherichia coli PA3]
gi|424120775|ref|ZP_17854389.1| RNase III regulator YmdB [Escherichia coli PA5]
gi|424126979|ref|ZP_17860111.1| RNase III regulator YmdB [Escherichia coli PA9]
gi|424133126|ref|ZP_17865847.1| RNase III regulator YmdB [Escherichia coli PA10]
gi|424139716|ref|ZP_17871897.1| RNase III regulator YmdB [Escherichia coli PA14]
gi|424146166|ref|ZP_17877815.1| RNase III regulator YmdB [Escherichia coli PA15]
gi|424152242|ref|ZP_17883401.1| RNase III regulator YmdB [Escherichia coli PA24]
gi|424205973|ref|ZP_17888841.1| RNase III regulator YmdB [Escherichia coli PA25]
gi|424282254|ref|ZP_17894724.1| RNase III regulator YmdB [Escherichia coli PA28]
gi|424432490|ref|ZP_17900489.1| RNase III regulator YmdB [Escherichia coli PA32]
gi|424454663|ref|ZP_17906101.1| RNase III regulator YmdB [Escherichia coli PA33]
gi|424460999|ref|ZP_17911798.1| RNase III regulator YmdB [Escherichia coli PA39]
gi|424467453|ref|ZP_17917553.1| RNase III regulator YmdB [Escherichia coli PA41]
gi|424474005|ref|ZP_17923591.1| RNase III regulator YmdB [Escherichia coli PA42]
gi|424479904|ref|ZP_17929074.1| RNase III regulator YmdB [Escherichia coli TW07945]
gi|424485985|ref|ZP_17934767.1| RNase III regulator YmdB [Escherichia coli TW09098]
gi|424492219|ref|ZP_17940427.1| RNase III regulator YmdB [Escherichia coli TW09195]
gi|424499208|ref|ZP_17946397.1| RNase III regulator YmdB [Escherichia coli EC4203]
gi|424505347|ref|ZP_17952044.1| RNase III regulator YmdB [Escherichia coli EC4196]
gi|424511726|ref|ZP_17957833.1| RNase III regulator YmdB [Escherichia coli TW14313]
gi|424519210|ref|ZP_17963560.1| RNase III regulator YmdB [Escherichia coli TW14301]
gi|424525096|ref|ZP_17969044.1| RNase III regulator YmdB [Escherichia coli EC4421]
gi|424531286|ref|ZP_17974844.1| RNase III regulator YmdB [Escherichia coli EC4422]
gi|424537254|ref|ZP_17980432.1| RNase III regulator YmdB [Escherichia coli EC4013]
gi|424543201|ref|ZP_17985911.1| RNase III regulator YmdB [Escherichia coli EC4402]
gi|424549518|ref|ZP_17991627.1| RNase III regulator YmdB [Escherichia coli EC4439]
gi|424555750|ref|ZP_17997387.1| RNase III regulator YmdB [Escherichia coli EC4436]
gi|424562099|ref|ZP_18003311.1| RNase III regulator YmdB [Escherichia coli EC4437]
gi|424568161|ref|ZP_18008984.1| RNase III regulator YmdB [Escherichia coli EC4448]
gi|424574318|ref|ZP_18014656.1| RNase III regulator YmdB [Escherichia coli EC1845]
gi|424580229|ref|ZP_18020092.1| RNase III regulator YmdB [Escherichia coli EC1863]
gi|425096920|ref|ZP_18499883.1| regulator of RNase III activity [Escherichia coli 3.4870]
gi|425103151|ref|ZP_18505687.1| regulator of RNase III activity [Escherichia coli 5.2239]
gi|425108939|ref|ZP_18511116.1| RNase III regulator YmdB [Escherichia coli 6.0172]
gi|425114409|ref|ZP_18516227.1| RNase III regulator YmdB [Escherichia coli 8.0566]
gi|425119121|ref|ZP_18520837.1| regulator of RNase III activity [Escherichia coli 8.0569]
gi|425124679|ref|ZP_18526166.1| regulator of RNase III activity [Escherichia coli 8.0586]
gi|425130737|ref|ZP_18531764.1| regulator of RNase III activity [Escherichia coli 8.2524]
gi|425137103|ref|ZP_18537755.1| RNase III regulator YmdB [Escherichia coli 10.0833]
gi|425142928|ref|ZP_18543158.1| regulator of RNase III activity [Escherichia coli 10.0869]
gi|425149181|ref|ZP_18548996.1| regulator of RNase III activity [Escherichia coli 88.0221]
gi|425154903|ref|ZP_18554380.1| RNase III regulator YmdB [Escherichia coli PA34]
gi|425161362|ref|ZP_18560467.1| RNase III regulator YmdB [Escherichia coli FDA506]
gi|425166922|ref|ZP_18565659.1| RNase III regulator YmdB [Escherichia coli FDA507]
gi|425173168|ref|ZP_18571492.1| RNase III regulator YmdB [Escherichia coli FDA504]
gi|425179040|ref|ZP_18577023.1| RNase III regulator YmdB [Escherichia coli FRIK1999]
gi|425185279|ref|ZP_18582809.1| RNase III regulator YmdB [Escherichia coli FRIK1997]
gi|425192036|ref|ZP_18589086.1| RNase III regulator YmdB [Escherichia coli NE1487]
gi|425198387|ref|ZP_18594937.1| RNase III regulator YmdB [Escherichia coli NE037]
gi|425204978|ref|ZP_18601030.1| RNase III regulator YmdB [Escherichia coli FRIK2001]
gi|425210707|ref|ZP_18606365.1| RNase III regulator YmdB [Escherichia coli PA4]
gi|425216774|ref|ZP_18612008.1| RNase III regulator YmdB [Escherichia coli PA23]
gi|425223353|ref|ZP_18618117.1| RNase III regulator YmdB [Escherichia coli PA49]
gi|425229562|ref|ZP_18623883.1| RNase III regulator YmdB [Escherichia coli PA45]
gi|425235856|ref|ZP_18629748.1| RNase III regulator YmdB [Escherichia coli TT12B]
gi|425241860|ref|ZP_18635415.1| RNase III regulator YmdB [Escherichia coli MA6]
gi|425247952|ref|ZP_18641077.1| RNase III regulator YmdB [Escherichia coli 5905]
gi|425253729|ref|ZP_18646518.1| RNase III regulator YmdB [Escherichia coli CB7326]
gi|425259944|ref|ZP_18652248.1| RNase III regulator YmdB [Escherichia coli EC96038]
gi|425266047|ref|ZP_18657903.1| RNase III regulator YmdB [Escherichia coli 5412]
gi|425272043|ref|ZP_18663513.1| RNase III regulator YmdB [Escherichia coli TW15901]
gi|425277176|ref|ZP_18668477.1| RNase III regulator YmdB [Escherichia coli ARS4.2123]
gi|425282550|ref|ZP_18673638.1| RNase III regulator YmdB [Escherichia coli TW00353]
gi|425293619|ref|ZP_18684086.1| RNase III regulator YmdB [Escherichia coli PA38]
gi|425304574|ref|ZP_18694336.1| RNase III regulator YmdB [Escherichia coli N1]
gi|425310274|ref|ZP_18699669.1| RNase III regulator YmdB [Escherichia coli EC1735]
gi|425316207|ref|ZP_18705202.1| RNase III regulator YmdB [Escherichia coli EC1736]
gi|425322300|ref|ZP_18710884.1| RNase III regulator YmdB [Escherichia coli EC1737]
gi|425328498|ref|ZP_18716631.1| RNase III regulator YmdB [Escherichia coli EC1846]
gi|425334695|ref|ZP_18722327.1| RNase III regulator YmdB [Escherichia coli EC1847]
gi|425341090|ref|ZP_18728233.1| RNase III regulator YmdB [Escherichia coli EC1848]
gi|425346947|ref|ZP_18733671.1| RNase III regulator YmdB [Escherichia coli EC1849]
gi|425353194|ref|ZP_18739490.1| RNase III regulator YmdB [Escherichia coli EC1850]
gi|425359180|ref|ZP_18745066.1| RNase III regulator YmdB [Escherichia coli EC1856]
gi|425365312|ref|ZP_18750753.1| RNase III regulator YmdB [Escherichia coli EC1862]
gi|425371722|ref|ZP_18756603.1| RNase III regulator YmdB [Escherichia coli EC1864]
gi|425384528|ref|ZP_18768323.1| RNase III regulator YmdB [Escherichia coli EC1866]
gi|425391226|ref|ZP_18774599.1| RNase III regulator YmdB [Escherichia coli EC1868]
gi|425397337|ref|ZP_18780294.1| RNase III regulator YmdB [Escherichia coli EC1869]
gi|425403307|ref|ZP_18785834.1| RNase III regulator YmdB [Escherichia coli EC1870]
gi|425409856|ref|ZP_18791924.1| RNase III regulator YmdB [Escherichia coli NE098]
gi|425416189|ref|ZP_18797730.1| RNase III regulator YmdB [Escherichia coli FRIK523]
gi|425427301|ref|ZP_18808261.1| RNase III regulator YmdB [Escherichia coli 0.1304]
gi|428945984|ref|ZP_19018509.1| regulator of RNase III activity [Escherichia coli 88.1467]
gi|428952111|ref|ZP_19024146.1| regulator of RNase III activity [Escherichia coli 88.1042]
gi|428958002|ref|ZP_19029592.1| regulator of RNase III activity [Escherichia coli 89.0511]
gi|428964356|ref|ZP_19035441.1| regulator of RNase III activity [Escherichia coli 90.0091]
gi|428970479|ref|ZP_19041041.1| regulator of RNase III activity [Escherichia coli 90.0039]
gi|428976996|ref|ZP_19047074.1| regulator of RNase III activity [Escherichia coli 90.2281]
gi|428982738|ref|ZP_19052381.1| regulator of RNase III activity [Escherichia coli 93.0055]
gi|428988910|ref|ZP_19058105.1| regulator of RNase III activity [Escherichia coli 93.0056]
gi|428994754|ref|ZP_19063568.1| regulator of RNase III activity [Escherichia coli 94.0618]
gi|429000816|ref|ZP_19069239.1| regulator of RNase III activity [Escherichia coli 95.0183]
gi|429006998|ref|ZP_19074802.1| regulator of RNase III activity [Escherichia coli 95.1288]
gi|429013463|ref|ZP_19080609.1| regulator of RNase III activity [Escherichia coli 95.0943]
gi|429019639|ref|ZP_19086338.1| regulator of RNase III activity [Escherichia coli 96.0428]
gi|429025282|ref|ZP_19091597.1| regulator of RNase III activity [Escherichia coli 96.0427]
gi|429031491|ref|ZP_19097278.1| regulator of RNase III activity [Escherichia coli 96.0939]
gi|429037649|ref|ZP_19103007.1| regulator of RNase III activity [Escherichia coli 96.0932]
gi|429043791|ref|ZP_19108705.1| regulator of RNase III activity [Escherichia coli 96.0107]
gi|429049378|ref|ZP_19114018.1| regulator of RNase III activity [Escherichia coli 97.0003]
gi|429054704|ref|ZP_19119153.1| regulator of RNase III activity [Escherichia coli 97.1742]
gi|429060421|ref|ZP_19124527.1| regulator of RNase III activity [Escherichia coli 97.0007]
gi|429066040|ref|ZP_19129804.1| regulator of RNase III activity [Escherichia coli 99.0672]
gi|429072415|ref|ZP_19135743.1| RNase III regulator YmdB [Escherichia coli 99.0678]
gi|429077787|ref|ZP_19140981.1| regulator of RNase III activity [Escherichia coli 99.0713]
gi|429825167|ref|ZP_19356545.1| regulator of RNase III activity [Escherichia coli 96.0109]
gi|429831508|ref|ZP_19362215.1| regulator of RNase III activity [Escherichia coli 97.0010]
gi|432357360|ref|ZP_19600603.1| hypothetical protein WCC_01319 [Escherichia coli KTE4]
gi|432380755|ref|ZP_19623704.1| hypothetical protein WCU_00897 [Escherichia coli KTE15]
gi|432386520|ref|ZP_19629415.1| hypothetical protein WCY_01770 [Escherichia coli KTE16]
gi|432391066|ref|ZP_19633924.1| hypothetical protein WE9_01391 [Escherichia coli KTE21]
gi|432396901|ref|ZP_19639686.1| hypothetical protein WEI_01820 [Escherichia coli KTE25]
gi|432405834|ref|ZP_19648554.1| hypothetical protein WEO_01022 [Escherichia coli KTE28]
gi|432411135|ref|ZP_19653813.1| hypothetical protein WG9_01620 [Escherichia coli KTE39]
gi|432416092|ref|ZP_19658714.1| hypothetical protein WGI_01602 [Escherichia coli KTE44]
gi|432421138|ref|ZP_19663693.1| hypothetical protein A137_01558 [Escherichia coli KTE178]
gi|432431179|ref|ZP_19673620.1| hypothetical protein A13K_01470 [Escherichia coli KTE187]
gi|432435711|ref|ZP_19678105.1| hypothetical protein A13M_01417 [Escherichia coli KTE188]
gi|432440509|ref|ZP_19682858.1| hypothetical protein A13O_01335 [Escherichia coli KTE189]
gi|432445626|ref|ZP_19687929.1| hypothetical protein A13S_01662 [Escherichia coli KTE191]
gi|432449262|ref|ZP_19691543.1| hypothetical protein A13W_00215 [Escherichia coli KTE193]
gi|432456000|ref|ZP_19698195.1| hypothetical protein A15C_01789 [Escherichia coli KTE201]
gi|432464984|ref|ZP_19707088.1| hypothetical protein A15K_00928 [Escherichia coli KTE205]
gi|432470384|ref|ZP_19712436.1| hypothetical protein A15M_01268 [Escherichia coli KTE206]
gi|432484733|ref|ZP_19726652.1| hypothetical protein A15Y_01211 [Escherichia coli KTE212]
gi|432494934|ref|ZP_19736749.1| hypothetical protein A173_02102 [Escherichia coli KTE214]
gi|432499283|ref|ZP_19741055.1| hypothetical protein A177_01379 [Escherichia coli KTE216]
gi|432503772|ref|ZP_19745505.1| hypothetical protein A17E_00826 [Escherichia coli KTE220]
gi|432513323|ref|ZP_19750556.1| hypothetical protein A17M_01179 [Escherichia coli KTE224]
gi|432523186|ref|ZP_19760321.1| hypothetical protein A17Y_01299 [Escherichia coli KTE230]
gi|432553084|ref|ZP_19789813.1| hypothetical protein A1S3_01476 [Escherichia coli KTE47]
gi|432558103|ref|ZP_19794791.1| hypothetical protein A1S7_01755 [Escherichia coli KTE49]
gi|432563108|ref|ZP_19799726.1| hypothetical protein A1SA_01768 [Escherichia coli KTE51]
gi|432568035|ref|ZP_19804556.1| hypothetical protein A1SE_01613 [Escherichia coli KTE53]
gi|432573066|ref|ZP_19809556.1| hypothetical protein A1SI_01761 [Escherichia coli KTE55]
gi|432579747|ref|ZP_19816177.1| hypothetical protein A1SK_03519 [Escherichia coli KTE56]
gi|432587293|ref|ZP_19823659.1| hypothetical protein A1SO_01648 [Escherichia coli KTE58]
gi|432592184|ref|ZP_19828511.1| hypothetical protein A1SS_01609 [Escherichia coli KTE60]
gi|432596906|ref|ZP_19833187.1| hypothetical protein A1SW_01617 [Escherichia coli KTE62]
gi|432601572|ref|ZP_19837819.1| hypothetical protein A1U5_01407 [Escherichia coli KTE66]
gi|432606895|ref|ZP_19843086.1| hypothetical protein A1U7_01893 [Escherichia coli KTE67]
gi|432610811|ref|ZP_19846978.1| hypothetical protein A1UG_01165 [Escherichia coli KTE72]
gi|432615967|ref|ZP_19852091.1| hypothetical protein A1UM_01399 [Escherichia coli KTE75]
gi|432626644|ref|ZP_19862625.1| hypothetical protein A1UQ_01480 [Escherichia coli KTE77]
gi|432636312|ref|ZP_19872194.1| hypothetical protein A1UY_01669 [Escherichia coli KTE81]
gi|432645568|ref|ZP_19881366.1| hypothetical protein A1W5_01318 [Escherichia coli KTE86]
gi|432650483|ref|ZP_19886242.1| hypothetical protein A1W7_01484 [Escherichia coli KTE87]
gi|432654668|ref|ZP_19890384.1| hypothetical protein A1WE_00775 [Escherichia coli KTE93]
gi|432660267|ref|ZP_19895917.1| hypothetical protein A1WY_01681 [Escherichia coli KTE111]
gi|432669984|ref|ZP_19905524.1| hypothetical protein A1Y7_01524 [Escherichia coli KTE119]
gi|432674048|ref|ZP_19909533.1| hypothetical protein A1YU_00601 [Escherichia coli KTE142]
gi|432684877|ref|ZP_19920185.1| hypothetical protein A31A_01729 [Escherichia coli KTE156]
gi|432690967|ref|ZP_19926205.1| hypothetical protein A31G_03186 [Escherichia coli KTE161]
gi|432693770|ref|ZP_19928980.1| hypothetical protein A31I_01239 [Escherichia coli KTE162]
gi|432698437|ref|ZP_19933602.1| hypothetical protein A31M_01184 [Escherichia coli KTE169]
gi|432703661|ref|ZP_19938778.1| hypothetical protein A31Q_01538 [Escherichia coli KTE171]
gi|432709945|ref|ZP_19945009.1| hypothetical protein WCG_03270 [Escherichia coli KTE6]
gi|432712674|ref|ZP_19947723.1| hypothetical protein WCI_01043 [Escherichia coli KTE8]
gi|432718079|ref|ZP_19953063.1| hypothetical protein WCK_01702 [Escherichia coli KTE9]
gi|432722528|ref|ZP_19957451.1| hypothetical protein WE1_01556 [Escherichia coli KTE17]
gi|432727116|ref|ZP_19961997.1| hypothetical protein WE3_01558 [Escherichia coli KTE18]
gi|432731800|ref|ZP_19966635.1| hypothetical protein WGK_01640 [Escherichia coli KTE45]
gi|432736542|ref|ZP_19971312.1| hypothetical protein WGE_01787 [Escherichia coli KTE42]
gi|432740802|ref|ZP_19975523.1| hypothetical protein WEE_01481 [Escherichia coli KTE23]
gi|432745058|ref|ZP_19979753.1| hypothetical protein WGG_01181 [Escherichia coli KTE43]
gi|432753789|ref|ZP_19988345.1| hypothetical protein WEA_00762 [Escherichia coli KTE22]
gi|432758878|ref|ZP_19993377.1| hypothetical protein A1S1_00997 [Escherichia coli KTE46]
gi|432769868|ref|ZP_20004220.1| hypothetical protein A1S9_02669 [Escherichia coli KTE50]
gi|432777920|ref|ZP_20012169.1| hypothetical protein A1SQ_01585 [Escherichia coli KTE59]
gi|432782905|ref|ZP_20017089.1| hypothetical protein A1SY_01740 [Escherichia coli KTE63]
gi|432786708|ref|ZP_20020872.1| hypothetical protein A1U3_00844 [Escherichia coli KTE65]
gi|432792314|ref|ZP_20026402.1| hypothetical protein A1US_01527 [Escherichia coli KTE78]
gi|432798275|ref|ZP_20032299.1| hypothetical protein A1UU_03013 [Escherichia coli KTE79]
gi|432801348|ref|ZP_20035330.1| hypothetical protein A1W3_01601 [Escherichia coli KTE84]
gi|432820294|ref|ZP_20053997.1| hypothetical protein A1Y5_01894 [Escherichia coli KTE118]
gi|432826515|ref|ZP_20060169.1| hypothetical protein A1YA_03228 [Escherichia coli KTE123]
gi|432843583|ref|ZP_20076766.1| hypothetical protein A1YS_01501 [Escherichia coli KTE141]
gi|432849497|ref|ZP_20080719.1| hypothetical protein A1YY_00844 [Escherichia coli KTE144]
gi|432874204|ref|ZP_20093341.1| hypothetical protein A313_04229 [Escherichia coli KTE147]
gi|432880768|ref|ZP_20097303.1| hypothetical protein A317_03585 [Escherichia coli KTE154]
gi|432893754|ref|ZP_20105766.1| hypothetical protein A31K_02903 [Escherichia coli KTE165]
gi|432897944|ref|ZP_20108775.1| hypothetical protein A13U_01529 [Escherichia coli KTE192]
gi|432903915|ref|ZP_20113186.1| hypothetical protein A13Y_01550 [Escherichia coli KTE194]
gi|432918240|ref|ZP_20122645.1| hypothetical protein A133_01554 [Escherichia coli KTE173]
gi|432925530|ref|ZP_20127559.1| hypothetical protein A135_01602 [Escherichia coli KTE175]
gi|432936954|ref|ZP_20135646.1| hypothetical protein A13C_00062 [Escherichia coli KTE183]
gi|432946340|ref|ZP_20141969.1| hypothetical protein A153_01719 [Escherichia coli KTE196]
gi|432954338|ref|ZP_20146457.1| hypothetical protein A155_01732 [Escherichia coli KTE197]
gi|432960596|ref|ZP_20150716.1| hypothetical protein A15E_01629 [Escherichia coli KTE202]
gi|432971242|ref|ZP_20160115.1| hypothetical protein A15O_01812 [Escherichia coli KTE207]
gi|432977677|ref|ZP_20166500.1| hypothetical protein A15S_03591 [Escherichia coli KTE209]
gi|432980490|ref|ZP_20169268.1| hypothetical protein A15W_01614 [Escherichia coli KTE211]
gi|432984775|ref|ZP_20173504.1| hypothetical protein A175_01225 [Escherichia coli KTE215]
gi|432990115|ref|ZP_20178781.1| hypothetical protein A179_01887 [Escherichia coli KTE217]
gi|432994749|ref|ZP_20183363.1| hypothetical protein A17A_01833 [Escherichia coli KTE218]
gi|432999276|ref|ZP_20187812.1| hypothetical protein A17K_01614 [Escherichia coli KTE223]
gi|433004491|ref|ZP_20192929.1| hypothetical protein A17S_02058 [Escherichia coli KTE227]
gi|433011748|ref|ZP_20200151.1| hypothetical protein A17W_04515 [Escherichia coli KTE229]
gi|433013248|ref|ZP_20201620.1| hypothetical protein WI5_01079 [Escherichia coli KTE104]
gi|433022889|ref|ZP_20210899.1| hypothetical protein WI9_01060 [Escherichia coli KTE106]
gi|433028044|ref|ZP_20215911.1| hypothetical protein WIA_01138 [Escherichia coli KTE109]
gi|433032577|ref|ZP_20220346.1| hypothetical protein WIC_01183 [Escherichia coli KTE112]
gi|433038079|ref|ZP_20225689.1| hypothetical protein WIE_01425 [Escherichia coli KTE113]
gi|433042545|ref|ZP_20230064.1| hypothetical protein WIG_01085 [Escherichia coli KTE117]
gi|433047183|ref|ZP_20234588.1| hypothetical protein WII_01154 [Escherichia coli KTE120]
gi|433057323|ref|ZP_20244403.1| hypothetical protein WIM_01109 [Escherichia coli KTE124]
gi|433062268|ref|ZP_20249221.1| hypothetical protein WIO_01101 [Escherichia coli KTE125]
gi|433072071|ref|ZP_20258762.1| hypothetical protein WIS_01048 [Escherichia coli KTE129]
gi|433077177|ref|ZP_20263737.1| hypothetical protein WIU_01054 [Escherichia coli KTE131]
gi|433081962|ref|ZP_20268434.1| hypothetical protein WIW_01107 [Escherichia coli KTE133]
gi|433086631|ref|ZP_20273023.1| hypothetical protein WIY_01083 [Escherichia coli KTE137]
gi|433095915|ref|ZP_20282124.1| hypothetical protein WK3_01125 [Escherichia coli KTE139]
gi|433100551|ref|ZP_20286656.1| hypothetical protein WK5_01109 [Escherichia coli KTE145]
gi|433105137|ref|ZP_20291151.1| hypothetical protein WK7_01018 [Escherichia coli KTE148]
gi|433110341|ref|ZP_20296212.1| hypothetical protein WK9_01206 [Escherichia coli KTE150]
gi|433114906|ref|ZP_20300717.1| hypothetical protein WKA_01098 [Escherichia coli KTE153]
gi|433119588|ref|ZP_20305290.1| hypothetical protein WKC_01031 [Escherichia coli KTE157]
gi|433124578|ref|ZP_20310161.1| hypothetical protein WKE_01079 [Escherichia coli KTE160]
gi|433138638|ref|ZP_20323918.1| hypothetical protein WKM_00925 [Escherichia coli KTE167]
gi|433143661|ref|ZP_20328823.1| hypothetical protein WKO_01200 [Escherichia coli KTE168]
gi|433148533|ref|ZP_20333582.1| hypothetical protein WKQ_01194 [Escherichia coli KTE174]
gi|433153120|ref|ZP_20338084.1| hypothetical protein WKS_01051 [Escherichia coli KTE176]
gi|433162866|ref|ZP_20347623.1| hypothetical protein WKW_01077 [Escherichia coli KTE179]
gi|433167893|ref|ZP_20352556.1| hypothetical protein WKY_01153 [Escherichia coli KTE180]
gi|433172870|ref|ZP_20357420.1| hypothetical protein WGQ_01143 [Escherichia coli KTE232]
gi|433182558|ref|ZP_20366850.1| hypothetical protein WGO_01018 [Escherichia coli KTE85]
gi|433187826|ref|ZP_20371941.1| hypothetical protein WGS_00905 [Escherichia coli KTE88]
gi|433197644|ref|ZP_20381562.1| hypothetical protein WGW_01190 [Escherichia coli KTE94]
gi|433207146|ref|ZP_20390839.1| hypothetical protein WI1_00918 [Escherichia coli KTE97]
gi|433211900|ref|ZP_20395509.1| hypothetical protein WI3_01081 [Escherichia coli KTE99]
gi|433322827|ref|ZP_20400230.1| hypothetical protein B185_005340 [Escherichia coli J96]
gi|442590785|ref|ZP_21009544.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|442600019|ref|ZP_21017721.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|442603934|ref|ZP_21018788.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Escherichia coli Nissle 1917]
gi|444923814|ref|ZP_21243398.1| regulator of RNase III activity [Escherichia coli 09BKT078844]
gi|444930017|ref|ZP_21249136.1| regulator of RNase III activity [Escherichia coli 99.0814]
gi|444935234|ref|ZP_21254128.1| regulator of RNase III activity [Escherichia coli 99.0815]
gi|444940877|ref|ZP_21259492.1| regulator of RNase III activity [Escherichia coli 99.0816]
gi|444946538|ref|ZP_21264928.1| regulator of RNase III activity [Escherichia coli 99.0839]
gi|444952077|ref|ZP_21270262.1| regulator of RNase III activity [Escherichia coli 99.0848]
gi|444957536|ref|ZP_21275489.1| regulator of RNase III activity [Escherichia coli 99.1753]
gi|444962812|ref|ZP_21280521.1| regulator of RNase III activity [Escherichia coli 99.1775]
gi|444968506|ref|ZP_21285956.1| regulator of RNase III activity [Escherichia coli 99.1793]
gi|444973971|ref|ZP_21291210.1| regulator of RNase III activity [Escherichia coli 99.1805]
gi|444979194|ref|ZP_21296179.1| regulator of RNase III activity [Escherichia coli ATCC 700728]
gi|444984843|ref|ZP_21301687.1| regulator of RNase III activity [Escherichia coli PA11]
gi|444990090|ref|ZP_21306807.1| regulator of RNase III activity [Escherichia coli PA19]
gi|444995301|ref|ZP_21311877.1| regulator of RNase III activity [Escherichia coli PA13]
gi|445000990|ref|ZP_21317430.1| regulator of RNase III activity [Escherichia coli PA2]
gi|445006409|ref|ZP_21322723.1| regulator of RNase III activity [Escherichia coli PA47]
gi|445011505|ref|ZP_21327675.1| regulator of RNase III activity [Escherichia coli PA48]
gi|445017257|ref|ZP_21333286.1| regulator of RNase III activity [Escherichia coli PA8]
gi|445022807|ref|ZP_21338705.1| regulator of RNase III activity [Escherichia coli 7.1982]
gi|445027984|ref|ZP_21343737.1| regulator of RNase III activity [Escherichia coli 99.1781]
gi|445033566|ref|ZP_21349163.1| regulator of RNase III activity [Escherichia coli 99.1762]
gi|445039246|ref|ZP_21354689.1| regulator of RNase III activity [Escherichia coli PA35]
gi|445044528|ref|ZP_21359843.1| regulator of RNase III activity [Escherichia coli 3.4880]
gi|445050075|ref|ZP_21365210.1| regulator of RNase III activity [Escherichia coli 95.0083]
gi|445055755|ref|ZP_21370681.1| regulator of RNase III activity [Escherichia coli 99.0670]
gi|450187502|ref|ZP_21889852.1| hypothetical protein A364_06055 [Escherichia coli SEPT362]
gi|450241573|ref|ZP_21899625.1| hypothetical protein C201_04661 [Escherichia coli S17]
gi|452971550|ref|ZP_21969777.1| RNase III inhibitor [Escherichia coli O157:H7 str. EC4009]
gi|67476551|sp|P0A8D6.1|YMDB_ECOLI RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|67476554|sp|P0A8D7.1|YMDB_ECOL6 RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|67476557|sp|P0A8D8.1|YMDB_ECO57 RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|12514577|gb|AAG55791.1|AE005315_5 putative polyprotein [Escherichia coli O157:H7 str. EDL933]
gi|26107583|gb|AAN79782.1|AE016759_56 Hypothetical protein ymdB [Escherichia coli CFT073]
gi|1787283|gb|AAC74129.1| O-acetyl-ADP-ribose deacetylase; RNase III inhibitor during cold
shock; putative cardiolipin synthase C regulatory
subunit [Escherichia coli str. K-12 substr. MG1655]
gi|4062616|dbj|BAA35835.1| conserved hypothetical protein [Escherichia coli str. K12 substr.
W3110]
gi|13360887|dbj|BAB34846.1| putative polyprotein [Escherichia coli O157:H7 str. Sakai]
gi|73855077|gb|AAZ87784.1| putative polyprotein [Shigella sonnei Ss046]
gi|81245899|gb|ABB66607.1| putative polyprotein [Shigella boydii Sb227]
gi|91071769|gb|ABE06650.1| hypothetical protein YmdB [Escherichia coli UTI89]
gi|110342814|gb|ABG69051.1| hypothetical protein YmdB [Escherichia coli 536]
gi|115512358|gb|ABJ00433.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|157077736|gb|ABV17444.1| appr-1-p processing enzyme domain protein [Escherichia coli
E24377A]
gi|169755486|gb|ACA78185.1| Appr-1-p processing domain protein [Escherichia coli ATCC 8739]
gi|169888532|gb|ACB02239.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
gi|170519689|gb|ACB17867.1| appr-1-p processing enzyme domain protein [Escherichia coli
SMS-3-5]
gi|187770456|gb|EDU34300.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4196]
gi|188018211|gb|EDU56333.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4113]
gi|188999104|gb|EDU68090.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4076]
gi|189358237|gb|EDU76656.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4401]
gi|189363116|gb|EDU81535.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4486]
gi|189368687|gb|EDU87103.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4501]
gi|189370489|gb|EDU88905.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC869]
gi|189378270|gb|EDU96686.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC508]
gi|190907274|gb|EDV66872.1| appr-1-p processing enzyme domain protein [Escherichia coli F11]
gi|192957182|gb|EDV87631.1| appr-1-p processing enzyme domain protein [Escherichia coli
E110019]
gi|194419349|gb|EDX35431.1| appr-1-p processing enzyme domain protein [Shigella dysenteriae
1012]
gi|194422998|gb|EDX38992.1| appr-1-p processing enzyme domain protein [Escherichia coli 101-1]
gi|208725420|gb|EDZ75021.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4206]
gi|208731574|gb|EDZ80262.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4045]
gi|208737599|gb|EDZ85282.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4042]
gi|209157650|gb|ACI35083.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4115]
gi|209773678|gb|ACI85151.1| putative polyprotein [Escherichia coli]
gi|209773680|gb|ACI85152.1| putative polyprotein [Escherichia coli]
gi|209773682|gb|ACI85153.1| putative polyprotein [Escherichia coli]
gi|209773684|gb|ACI85154.1| putative polyprotein [Escherichia coli]
gi|209773686|gb|ACI85155.1| putative polyprotein [Escherichia coli]
gi|215264327|emb|CAS08684.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
gi|217318600|gb|EEC27026.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. TW14588]
gi|218360391|emb|CAQ97943.1| conserved hypothetical protein [Escherichia coli IAI1]
gi|218364695|emb|CAR02385.1| conserved hypothetical protein [Escherichia coli S88]
gi|218370438|emb|CAR18245.1| conserved hypothetical protein [Escherichia coli IAI39]
gi|218426562|emb|CAR07390.1| conserved hypothetical protein [Escherichia coli ED1a]
gi|222032799|emb|CAP75538.1| UPF0189 protein ymdB [Escherichia coli LF82]
gi|226898182|gb|EEH84441.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|227836803|gb|EEJ47269.1| appr-1-p processing enzyme domain protein [Escherichia coli 83972]
gi|238860462|gb|ACR62460.1| conserved protein [Escherichia coli BW2952]
gi|242376851|emb|CAQ31566.1| regulator of RNase III activity [Escherichia coli BL21(DE3)]
gi|253324974|gb|ACT29576.1| Appr-1-p processing domain protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973053|gb|ACT38724.1| hypothetical protein ECB_01042 [Escherichia coli B str. REL606]
gi|253977267|gb|ACT42937.1| hypothetical protein ECD_01042 [Escherichia coli BL21(DE3)]
gi|254591829|gb|ACT71190.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
gi|260449814|gb|ACX40236.1| Appr-1-p processing domain protein [Escherichia coli DH1]
gi|281178155|dbj|BAI54485.1| conserved hypothetical protein [Escherichia coli SE15]
gi|290761938|gb|ADD55899.1| UPF0189 protein ymdB [Escherichia coli O55:H7 str. CB9615]
gi|291434401|gb|EFF07374.1| ymdB protein [Escherichia coli B185]
gi|291469884|gb|EFF12368.1| hypothetical protein ECEG_00351 [Escherichia coli B354]
gi|294490172|gb|ADE88928.1| appr-1-p processing enzyme domain protein [Escherichia coli
IHE3034]
gi|299877432|gb|EFI85643.1| RNase III regulator YmdB [Escherichia coli MS 196-1]
gi|300297193|gb|EFJ53578.1| RNase III regulator YmdB [Escherichia coli MS 185-1]
gi|300307118|gb|EFJ61638.1| RNase III regulator YmdB [Escherichia coli MS 200-1]
gi|300318570|gb|EFJ68354.1| RNase III regulator YmdB [Escherichia coli MS 175-1]
gi|300410591|gb|EFJ94129.1| RNase III regulator YmdB [Escherichia coli MS 45-1]
gi|300450484|gb|EFK14104.1| RNase III regulator YmdB [Escherichia coli MS 116-1]
gi|300463569|gb|EFK27062.1| RNase III regulator YmdB [Escherichia coli MS 187-1]
gi|301076741|gb|EFK91547.1| RNase III regulator YmdB [Escherichia coli MS 146-1]
gi|305852744|gb|EFM53192.1| hypothetical protein ECNC101_18754 [Escherichia coli NC101]
gi|307553048|gb|ADN45823.1| putative polyprotein [Escherichia coli ABU 83972]
gi|307627485|gb|ADN71789.1| hypothetical protein UM146_12100 [Escherichia coli UM146]
gi|309701316|emb|CBJ00617.1| putative DNA and/or RNA unwinding protein [Escherichia coli ETEC
H10407]
gi|312286287|gb|EFR14200.1| macro domain protein [Escherichia coli 2362-75]
gi|312945608|gb|ADR26435.1| hypothetical protein NRG857_05040 [Escherichia coli O83:H1 str. NRG
857C]
gi|315135678|dbj|BAJ42837.1| hypothetical protein ECDH1ME8569_0981 [Escherichia coli DH1]
gi|315287401|gb|EFU46812.1| RNase III regulator YmdB [Escherichia coli MS 110-3]
gi|315291092|gb|EFU50455.1| RNase III regulator YmdB [Escherichia coli MS 153-1]
gi|315296674|gb|EFU55969.1| RNase III regulator YmdB [Escherichia coli MS 16-3]
gi|315618214|gb|EFU98804.1| macro domain protein [Escherichia coli 3431]
gi|320177334|gb|EFW52337.1| hypothetical protein SDB_00196 [Shigella dysenteriae CDC 74-1112]
gi|320186004|gb|EFW60750.1| hypothetical protein SGF_01790 [Shigella flexneri CDC 796-83]
gi|320189727|gb|EFW64383.1| hypothetical protein ECoD_03627 [Escherichia coli O157:H7 str.
EC1212]
gi|320196475|gb|EFW71098.1| hypothetical protein EcoM_01015 [Escherichia coli WV_060327]
gi|320637497|gb|EFX07297.1| RNase III inhibitor [Escherichia coli O157:H7 str. G5101]
gi|320643058|gb|EFX12259.1| RNase III inhibitor [Escherichia coli O157:H- str. 493-89]
gi|320648515|gb|EFX17170.1| RNase III inhibitor [Escherichia coli O157:H- str. H 2687]
gi|320653830|gb|EFX21904.1| RNase III inhibitor [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320659310|gb|EFX26879.1| RNase III inhibitor [Escherichia coli O55:H7 str. USDA 5905]
gi|320664444|gb|EFX31595.1| RNase III inhibitor [Escherichia coli O157:H7 str. LSU-61]
gi|323165536|gb|EFZ51323.1| macro domain protein [Shigella sonnei 53G]
gi|323174839|gb|EFZ60454.1| macro domain protein [Escherichia coli LT-68]
gi|323190554|gb|EFZ75826.1| macro domain protein [Escherichia coli RN587/1]
gi|323937786|gb|EGB34050.1| macro domain-containing protein [Escherichia coli E1520]
gi|323942514|gb|EGB38681.1| macro domain-containing protein [Escherichia coli E482]
gi|323953267|gb|EGB49133.1| macro domain-containing protein [Escherichia coli H252]
gi|323958057|gb|EGB53767.1| macro domain-containing protein [Escherichia coli H263]
gi|323962646|gb|EGB58224.1| macro domain-containing protein [Escherichia coli H489]
gi|323966988|gb|EGB62414.1| macro domain-containing protein [Escherichia coli M863]
gi|323973364|gb|EGB68553.1| macro domain-containing protein [Escherichia coli TA007]
gi|323976580|gb|EGB71668.1| macro domain-containing protein [Escherichia coli TW10509]
gi|324007884|gb|EGB77103.1| RNase III regulator YmdB [Escherichia coli MS 57-2]
gi|324013317|gb|EGB82536.1| RNase III regulator YmdB [Escherichia coli MS 60-1]
gi|326339267|gb|EGD63081.1| hypothetical protein ECF_04686 [Escherichia coli O157:H7 str. 1125]
gi|326344774|gb|EGD68522.1| RNase III regulator YmdB [Escherichia coli O157:H7 str. 1044]
gi|327253442|gb|EGE65080.1| macro domain protein [Escherichia coli STEC_7v]
gi|330910856|gb|EGH39366.1| Macro domain, possibly ADP-ribose binding module [Escherichia coli
AA86]
gi|331038384|gb|EGI10604.1| RNase III regulator YmdB [Escherichia coli H736]
gi|331045052|gb|EGI17179.1| RNase III regulator YmdB [Escherichia coli M605]
gi|331050374|gb|EGI22432.1| RNase III regulator YmdB [Escherichia coli M718]
gi|331055349|gb|EGI27358.1| RNase III regulator YmdB [Escherichia coli TA206]
gi|331080176|gb|EGI51355.1| RNase III regulator YmdB [Escherichia coli H299]
gi|332092934|gb|EGI98002.1| macro domain protein [Shigella dysenteriae 155-74]
gi|332094126|gb|EGI99178.1| macro domain protein [Shigella boydii 3594-74]
gi|333005828|gb|EGK25345.1| macro domain protein [Shigella flexneri VA-6]
gi|333969118|gb|AEG35923.1| Hypothetical protein ECNA114_1100 [Escherichia coli NA114]
gi|335576401|gb|EGM62656.1| regulator of RNase III activity [Shigella flexneri J1713]
gi|339414166|gb|AEJ55838.1| macro domain protein [Escherichia coli UMNF18]
gi|342363591|gb|EGU27698.1| RNase III inhibitor [Escherichia coli XH140A]
gi|344193243|gb|EGV47326.1| RNase III inhibitor [Escherichia coli XH001]
gi|345364531|gb|EGW96653.1| macro domain protein [Escherichia coli STEC_EH250]
gi|345378349|gb|EGX10280.1| macro domain protein [Escherichia coli STEC_MHI813]
gi|345379650|gb|EGX11558.1| macro domain protein [Escherichia coli G58-1]
gi|345389153|gb|EGX18959.1| macro domain protein [Escherichia coli STEC_S1191]
gi|349737236|gb|AEQ11942.1| RNase III inhibitor during cold shock, UPF0189 family [Escherichia
coli O7:K1 str. CE10]
gi|355352522|gb|EHG01697.1| hypothetical protein i01_01351 [Escherichia coli cloneA_i1]
gi|355419579|gb|AER83776.1| hypothetical protein i02_1195 [Escherichia coli str. 'clone D i2']
gi|355424499|gb|AER88695.1| hypothetical protein i14_1195 [Escherichia coli str. 'clone D i14']
gi|359331714|dbj|BAL38161.1| conserved protein [Escherichia coli str. K-12 substr. MDS42]
gi|371608013|gb|EHN96576.1| hypothetical protein ESOG_00931 [Escherichia coli E101]
gi|371609380|gb|EHN97919.1| hypothetical protein ESPG_02164 [Escherichia coli H397]
gi|371612612|gb|EHO01121.1| hypothetical protein ESNG_01374 [Escherichia coli B093]
gi|374358169|gb|AEZ39876.1| RNase III inhibitor [Escherichia coli O55:H7 str. RM12579]
gi|377847211|gb|EHU12213.1| regulator of RNase III activity [Escherichia coli DEC1A]
gi|377849157|gb|EHU14132.1| regulator of RNase III activity [Escherichia coli DEC1C]
gi|377852037|gb|EHU16968.1| regulator of RNase III activity [Escherichia coli DEC1B]
gi|377864595|gb|EHU29388.1| regulator of RNase III activity [Escherichia coli DEC1E]
gi|377867233|gb|EHU31995.1| hypothetical protein ECDEC2A_1396 [Escherichia coli DEC2A]
gi|377877532|gb|EHU42125.1| regulator of RNase III activity [Escherichia coli DEC2B]
gi|377882635|gb|EHU47174.1| regulator of RNase III activity [Escherichia coli DEC2D]
gi|377883257|gb|EHU47782.1| regulator of RNase III activity [Escherichia coli DEC2C]
gi|377896951|gb|EHU61340.1| regulator of RNase III activity [Escherichia coli DEC2E]
gi|377898952|gb|EHU63311.1| regulator of RNase III activity [Escherichia coli DEC3A]
gi|377901341|gb|EHU65663.1| regulator of RNase III activity [Escherichia coli DEC3B]
gi|377910748|gb|EHU74934.1| regulator of RNase III activity [Escherichia coli DEC3C]
gi|377915899|gb|EHU80000.1| regulator of RNase III activity [Escherichia coli DEC3D]
gi|377917620|gb|EHU81678.1| regulator of RNase III activity [Escherichia coli DEC3E]
gi|377929536|gb|EHU93432.1| regulator of RNase III activity [Escherichia coli DEC3F]
gi|377931870|gb|EHU95728.1| regulator of RNase III activity [Escherichia coli DEC4A]
gi|377936750|gb|EHV00543.1| regulator of RNase III activity [Escherichia coli DEC4B]
gi|377948232|gb|EHV11884.1| regulator of RNase III activity [Escherichia coli DEC4D]
gi|377948409|gb|EHV12060.1| regulator of RNase III activity [Escherichia coli DEC4C]
gi|377952510|gb|EHV16094.1| regulator of RNase III activity [Escherichia coli DEC4E]
gi|377963696|gb|EHV27138.1| regulator of RNase III activity [Escherichia coli DEC4F]
gi|377964704|gb|EHV28139.1| regulator of RNase III activity [Escherichia coli DEC5A]
gi|377971290|gb|EHV34647.1| regulator of RNase III activity [Escherichia coli DEC5B]
gi|377978048|gb|EHV41328.1| regulator of RNase III activity [Escherichia coli DEC5C]
gi|377979459|gb|EHV42736.1| regulator of RNase III activity [Escherichia coli DEC5D]
gi|377986839|gb|EHV50029.1| hypothetical protein ECDEC5E_1181 [Escherichia coli DEC5E]
gi|377997801|gb|EHV60899.1| hypothetical protein ECDEC6A_1283 [Escherichia coli DEC6A]
gi|377998629|gb|EHV61720.1| regulator of RNase III activity [Escherichia coli DEC6B]
gi|378001909|gb|EHV64965.1| hypothetical protein ECDEC6C_1175 [Escherichia coli DEC6C]
gi|378011942|gb|EHV74878.1| hypothetical protein ECDEC6D_1196 [Escherichia coli DEC6D]
gi|378014004|gb|EHV76917.1| regulator of RNase III activity [Escherichia coli DEC6E]
gi|380348997|gb|EIA37273.1| RNase III inhibitor [Escherichia coli SCI-07]
gi|383103401|gb|AFG40910.1| hypothetical protein P12B_c2062 [Escherichia coli P12b]
gi|385156289|gb|EIF18287.1| RNase III inhibitor [Escherichia coli O32:H37 str. P4]
gi|385538928|gb|EIF85778.1| UPF0189 protein ymdB [Escherichia coli M919]
gi|385711293|gb|EIG48252.1| UPF0189 protein ymdB [Escherichia coli H730]
gi|386122712|gb|EIG71320.1| UPF0189 protein ymdB [Escherichia sp. 4_1_40B]
gi|386142386|gb|EIG83524.1| macro domain protein [Escherichia coli 1.2741]
gi|386145978|gb|EIG92429.1| macro domain protein [Escherichia coli 97.0246]
gi|386153865|gb|EIH05146.1| macro domain protein [Escherichia coli 5.0588]
gi|386175668|gb|EIH47657.1| macro domain protein [Escherichia coli 99.0741]
gi|386208654|gb|EII13155.1| macro domain protein [Escherichia coli 5.0959]
gi|386227136|gb|EII49386.1| macro domain protein [Escherichia coli 2.3916]
gi|386233187|gb|EII65172.1| macro domain protein [Escherichia coli 2.4168]
gi|386238713|gb|EII75648.1| macro domain protein [Escherichia coli 3.2303]
gi|386243900|gb|EII85633.1| macro domain protein [Escherichia coli 3003]
gi|386256062|gb|EIJ05750.1| macro domain protein [Escherichia coli B41]
gi|386795386|gb|AFJ28420.1| hypothetical protein CDCO157_1359 [Escherichia coli Xuzhou21]
gi|388340926|gb|EIL07101.1| RNase III inhibitor [Escherichia coli O103:H25 str. CVM9340]
gi|388386414|gb|EIL48063.1| hypothetical protein EC54115_20857 [Escherichia coli 541-15]
gi|388402232|gb|EIL62812.1| hypothetical protein EC75_15759 [Escherichia coli 75]
gi|388405597|gb|EIL66023.1| hypothetical protein EC5411_09675 [Escherichia coli 541-1]
gi|388417018|gb|EIL76886.1| hypothetical protein ECHM605_13186 [Escherichia coli HM605]
gi|390648995|gb|EIN27621.1| RNase III regulator YmdB [Escherichia coli FRIK1996]
gi|390649375|gb|EIN27895.1| RNase III regulator YmdB [Escherichia coli FDA517]
gi|390649963|gb|EIN28431.1| RNase III regulator YmdB [Escherichia coli FDA505]
gi|390667724|gb|EIN44680.1| RNase III regulator YmdB [Escherichia coli 93-001]
gi|390669881|gb|EIN46473.1| RNase III regulator YmdB [Escherichia coli FRIK1990]
gi|390670122|gb|EIN46706.1| RNase III regulator YmdB [Escherichia coli FRIK1985]
gi|390686350|gb|EIN61708.1| RNase III regulator YmdB [Escherichia coli PA3]
gi|390689121|gb|EIN64100.1| RNase III regulator YmdB [Escherichia coli PA5]
gi|390689271|gb|EIN64239.1| RNase III regulator YmdB [Escherichia coli PA9]
gi|390706109|gb|EIN79718.1| RNase III regulator YmdB [Escherichia coli PA10]
gi|390706971|gb|EIN80435.1| RNase III regulator YmdB [Escherichia coli PA15]
gi|390707602|gb|EIN80943.1| RNase III regulator YmdB [Escherichia coli PA14]
gi|390718416|gb|EIN91170.1| RNase III regulator YmdB [Escherichia coli PA22]
gi|390730835|gb|EIO02780.1| RNase III regulator YmdB [Escherichia coli PA24]
gi|390731149|gb|EIO03069.1| RNase III regulator YmdB [Escherichia coli PA25]
gi|390733575|gb|EIO05152.1| RNase III regulator YmdB [Escherichia coli PA28]
gi|390748990|gb|EIO19304.1| RNase III regulator YmdB [Escherichia coli PA31]
gi|390749750|gb|EIO19944.1| RNase III regulator YmdB [Escherichia coli PA32]
gi|390751554|gb|EIO21443.1| RNase III regulator YmdB [Escherichia coli PA33]
gi|390760722|gb|EIO30035.1| RNase III regulator YmdB [Escherichia coli PA40]
gi|390773882|gb|EIO42200.1| RNase III regulator YmdB [Escherichia coli PA41]
gi|390775053|gb|EIO43141.1| RNase III regulator YmdB [Escherichia coli PA42]
gi|390776154|gb|EIO44118.1| RNase III regulator YmdB [Escherichia coli PA39]
gi|390784350|gb|EIO51919.1| RNase III regulator YmdB [Escherichia coli TW06591]
gi|390793289|gb|EIO60629.1| RNase III regulator YmdB [Escherichia coli TW10246]
gi|390800218|gb|EIO67321.1| RNase III regulator YmdB [Escherichia coli TW11039]
gi|390803601|gb|EIO70601.1| RNase III regulator YmdB [Escherichia coli TW07945]
gi|390810498|gb|EIO77255.1| RNase III regulator YmdB [Escherichia coli TW09109]
gi|390817996|gb|EIO84397.1| RNase III regulator YmdB [Escherichia coli TW10119]
gi|390818100|gb|EIO84500.1| RNase III regulator YmdB [Escherichia coli TW09098]
gi|390834829|gb|EIO99659.1| RNase III regulator YmdB [Escherichia coli EC4203]
gi|390836591|gb|EIP01100.1| RNase III regulator YmdB [Escherichia coli TW09195]
gi|390838163|gb|EIP02479.1| RNase III regulator YmdB [Escherichia coli EC4196]
gi|390853427|gb|EIP16421.1| RNase III regulator YmdB [Escherichia coli TW14301]
gi|390855252|gb|EIP17990.1| RNase III regulator YmdB [Escherichia coli TW14313]
gi|390856116|gb|EIP18749.1| RNase III regulator YmdB [Escherichia coli EC4421]
gi|390868769|gb|EIP30478.1| RNase III regulator YmdB [Escherichia coli EC4422]
gi|390872807|gb|EIP34086.1| RNase III regulator YmdB [Escherichia coli EC4013]
gi|390881814|gb|EIP42370.1| RNase III regulator YmdB [Escherichia coli EC4402]
gi|390884957|gb|EIP45215.1| RNase III regulator YmdB [Escherichia coli EC4439]
gi|390889100|gb|EIP48862.1| RNase III regulator YmdB [Escherichia coli EC4436]
gi|390902550|gb|EIP61639.1| RNase III regulator YmdB [Escherichia coli EC1738]
gi|390904868|gb|EIP63840.1| RNase III regulator YmdB [Escherichia coli EC4437]
gi|390909249|gb|EIP68044.1| RNase III regulator YmdB [Escherichia coli EC4448]
gi|390910949|gb|EIP69673.1| RNase III regulator YmdB [Escherichia coli EC1734]
gi|390923343|gb|EIP81269.1| RNase III regulator YmdB [Escherichia coli EC1863]
gi|390924533|gb|EIP82289.1| RNase III regulator YmdB [Escherichia coli EC1845]
gi|391252571|gb|EIQ11765.1| hypothetical protein SF285071_1233 [Shigella flexneri 2850-71]
gi|391255197|gb|EIQ14346.1| hypothetical protein SFCCH060_1048 [Shigella flexneri CCH060]
gi|391256294|gb|EIQ15427.1| hypothetical protein SFK1770_1645 [Shigella flexneri K-1770]
gi|391270899|gb|EIQ29782.1| hypothetical protein SB96558_2438 [Shigella boydii 965-58]
gi|391279125|gb|EIQ37815.1| hypothetical protein SB444474_2329 [Shigella boydii 4444-74]
gi|391285602|gb|EIQ44178.1| hypothetical protein SS323385_2150 [Shigella sonnei 3233-85]
gi|391286509|gb|EIQ45049.1| hypothetical protein SS322685_1642 [Shigella sonnei 3226-85]
gi|391293433|gb|EIQ51712.1| regulator of RNase III activity [Shigella sonnei 4822-66]
gi|391301041|gb|EIQ58944.1| hypothetical protein SD22575_2703 [Shigella dysenteriae 225-75]
gi|397902698|gb|EJL19011.1| regulator of RNase III activity [Shigella sonnei str. Moseley]
gi|404292021|gb|EJZ48864.1| UPF0189 protein ymdB [Escherichia sp. 1_1_43]
gi|404341223|gb|EJZ67633.1| regulator of RNase III activity [Shigella flexneri 1485-80]
gi|408070311|gb|EKH04676.1| RNase III regulator YmdB [Escherichia coli PA7]
gi|408074289|gb|EKH08573.1| RNase III regulator YmdB [Escherichia coli FRIK920]
gi|408083636|gb|EKH17455.1| RNase III regulator YmdB [Escherichia coli PA34]
gi|408086819|gb|EKH20321.1| RNase III regulator YmdB [Escherichia coli FDA506]
gi|408091499|gb|EKH24722.1| RNase III regulator YmdB [Escherichia coli FDA507]
gi|408099456|gb|EKH32101.1| RNase III regulator YmdB [Escherichia coli FDA504]
gi|408106611|gb|EKH38705.1| RNase III regulator YmdB [Escherichia coli FRIK1999]
gi|408113172|gb|EKH44776.1| RNase III regulator YmdB [Escherichia coli FRIK1997]
gi|408118145|gb|EKH49306.1| RNase III regulator YmdB [Escherichia coli NE1487]
gi|408126897|gb|EKH57434.1| RNase III regulator YmdB [Escherichia coli NE037]
gi|408128777|gb|EKH59041.1| RNase III regulator YmdB [Escherichia coli FRIK2001]
gi|408136902|gb|EKH66630.1| RNase III regulator YmdB [Escherichia coli PA4]
gi|408148029|gb|EKH76934.1| RNase III regulator YmdB [Escherichia coli PA23]
gi|408148906|gb|EKH77662.1| RNase III regulator YmdB [Escherichia coli PA49]
gi|408154190|gb|EKH82555.1| RNase III regulator YmdB [Escherichia coli PA45]
gi|408164186|gb|EKH91999.1| RNase III regulator YmdB [Escherichia coli TT12B]
gi|408168765|gb|EKH96126.1| RNase III regulator YmdB [Escherichia coli MA6]
gi|408169587|gb|EKH96846.1| RNase III regulator YmdB [Escherichia coli 5905]
gi|408184485|gb|EKI10803.1| RNase III regulator YmdB [Escherichia coli CB7326]
gi|408188457|gb|EKI14255.1| RNase III regulator YmdB [Escherichia coli 5412]
gi|408188639|gb|EKI14432.1| RNase III regulator YmdB [Escherichia coli EC96038]
gi|408195552|gb|EKI20922.1| RNase III regulator YmdB [Escherichia coli TW15901]
gi|408204520|gb|EKI29464.1| RNase III regulator YmdB [Escherichia coli TW00353]
gi|408204909|gb|EKI29815.1| RNase III regulator YmdB [Escherichia coli ARS4.2123]
gi|408228363|gb|EKI51900.1| RNase III regulator YmdB [Escherichia coli PA38]
gi|408230706|gb|EKI54065.1| RNase III regulator YmdB [Escherichia coli N1]
gi|408234984|gb|EKI57973.1| RNase III regulator YmdB [Escherichia coli EC1735]
gi|408246656|gb|EKI68914.1| RNase III regulator YmdB [Escherichia coli EC1736]
gi|408249959|gb|EKI71866.1| RNase III regulator YmdB [Escherichia coli EC1737]
gi|408254927|gb|EKI76391.1| RNase III regulator YmdB [Escherichia coli EC1846]
gi|408265367|gb|EKI86074.1| RNase III regulator YmdB [Escherichia coli EC1847]
gi|408266904|gb|EKI87388.1| RNase III regulator YmdB [Escherichia coli EC1848]
gi|408275279|gb|EKI95242.1| RNase III regulator YmdB [Escherichia coli EC1849]
gi|408282347|gb|EKJ01676.1| RNase III regulator YmdB [Escherichia coli EC1850]
gi|408284230|gb|EKJ03353.1| RNase III regulator YmdB [Escherichia coli EC1856]
gi|408297485|gb|EKJ15568.1| RNase III regulator YmdB [Escherichia coli EC1862]
gi|408298085|gb|EKJ16054.1| RNase III regulator YmdB [Escherichia coli EC1864]
gi|408314015|gb|EKJ30498.1| RNase III regulator YmdB [Escherichia coli EC1868]
gi|408314101|gb|EKJ30582.1| RNase III regulator YmdB [Escherichia coli EC1866]
gi|408329217|gb|EKJ44707.1| RNase III regulator YmdB [Escherichia coli EC1869]
gi|408332873|gb|EKJ47886.1| RNase III regulator YmdB [Escherichia coli NE098]
gi|408333787|gb|EKJ48707.1| RNase III regulator YmdB [Escherichia coli EC1870]
gi|408348317|gb|EKJ62415.1| RNase III regulator YmdB [Escherichia coli FRIK523]
gi|408352163|gb|EKJ65786.1| RNase III regulator YmdB [Escherichia coli 0.1304]
gi|408458402|gb|EKJ82189.1| hypothetical protein ECAD30_24850 [Escherichia coli AD30]
gi|408555837|gb|EKK32574.1| regulator of RNase III activity [Escherichia coli 5.2239]
gi|408556446|gb|EKK33039.1| regulator of RNase III activity [Escherichia coli 3.4870]
gi|408556771|gb|EKK33347.1| RNase III regulator YmdB [Escherichia coli 6.0172]
gi|408571397|gb|EKK47336.1| RNase III regulator YmdB [Escherichia coli 8.0566]
gi|408572357|gb|EKK48266.1| regulator of RNase III activity [Escherichia coli 8.0569]
gi|408582559|gb|EKK57773.1| regulator of RNase III activity [Escherichia coli 8.0586]
gi|408586563|gb|EKK61308.1| regulator of RNase III activity [Escherichia coli 8.2524]
gi|408587092|gb|EKK61768.1| RNase III regulator YmdB [Escherichia coli 10.0833]
gi|408601471|gb|EKK75273.1| regulator of RNase III activity [Escherichia coli 10.0869]
gi|408604207|gb|EKK77791.1| RNase III regulator YmdB [Escherichia coli 8.0416]
gi|408604328|gb|EKK77907.1| regulator of RNase III activity [Escherichia coli 88.0221]
gi|408615487|gb|EKK88679.1| regulator of RNase III activity [Escherichia coli 10.0821]
gi|427212230|gb|EKV81853.1| regulator of RNase III activity [Escherichia coli 88.1042]
gi|427213230|gb|EKV82658.1| regulator of RNase III activity [Escherichia coli 88.1467]
gi|427213491|gb|EKV82898.1| regulator of RNase III activity [Escherichia coli 89.0511]
gi|427231259|gb|EKV99315.1| regulator of RNase III activity [Escherichia coli 90.2281]
gi|427231925|gb|EKV99853.1| regulator of RNase III activity [Escherichia coli 90.0039]
gi|427232205|gb|EKW00103.1| regulator of RNase III activity [Escherichia coli 90.0091]
gi|427248875|gb|EKW15763.1| regulator of RNase III activity [Escherichia coli 93.0056]
gi|427249905|gb|EKW16653.1| regulator of RNase III activity [Escherichia coli 93.0055]
gi|427250620|gb|EKW17276.1| regulator of RNase III activity [Escherichia coli 94.0618]
gi|427267623|gb|EKW32853.1| regulator of RNase III activity [Escherichia coli 95.0943]
gi|427268243|gb|EKW33398.1| regulator of RNase III activity [Escherichia coli 95.0183]
gi|427270833|gb|EKW35697.1| regulator of RNase III activity [Escherichia coli 95.1288]
gi|427284123|gb|EKW48249.1| regulator of RNase III activity [Escherichia coli 96.0428]
gi|427288258|gb|EKW51900.1| regulator of RNase III activity [Escherichia coli 96.0427]
gi|427290076|gb|EKW53572.1| regulator of RNase III activity [Escherichia coli 96.0939]
gi|427302662|gb|EKW65445.1| regulator of RNase III activity [Escherichia coli 96.0932]
gi|427303512|gb|EKW66225.1| regulator of RNase III activity [Escherichia coli 97.0003]
gi|427307107|gb|EKW69592.1| regulator of RNase III activity [Escherichia coli 96.0107]
gi|427319076|gb|EKW80904.1| regulator of RNase III activity [Escherichia coli 97.1742]
gi|427320174|gb|EKW81950.1| regulator of RNase III activity [Escherichia coli 97.0007]
gi|427332158|gb|EKW93321.1| regulator of RNase III activity [Escherichia coli 99.0713]
gi|427332268|gb|EKW93428.1| RNase III regulator YmdB [Escherichia coli 99.0678]
gi|427332929|gb|EKW94048.1| regulator of RNase III activity [Escherichia coli 99.0672]
gi|429258278|gb|EKY42167.1| regulator of RNase III activity [Escherichia coli 96.0109]
gi|429259699|gb|EKY43351.1| regulator of RNase III activity [Escherichia coli 97.0010]
gi|430878902|gb|ELC02263.1| hypothetical protein WCC_01319 [Escherichia coli KTE4]
gi|430908786|gb|ELC30176.1| hypothetical protein WCY_01770 [Escherichia coli KTE16]
gi|430910046|gb|ELC31403.1| hypothetical protein WCU_00897 [Escherichia coli KTE15]
gi|430917221|gb|ELC38269.1| hypothetical protein WEI_01820 [Escherichia coli KTE25]
gi|430921684|gb|ELC42508.1| hypothetical protein WE9_01391 [Escherichia coli KTE21]
gi|430931988|gb|ELC52422.1| hypothetical protein WEO_01022 [Escherichia coli KTE28]
gi|430936799|gb|ELC57066.1| hypothetical protein WG9_01620 [Escherichia coli KTE39]
gi|430941873|gb|ELC62013.1| hypothetical protein WGI_01602 [Escherichia coli KTE44]
gi|430946755|gb|ELC66678.1| hypothetical protein A137_01558 [Escherichia coli KTE178]
gi|430954974|gb|ELC73767.1| hypothetical protein A13K_01470 [Escherichia coli KTE187]
gi|430964994|gb|ELC82436.1| hypothetical protein A13M_01417 [Escherichia coli KTE188]
gi|430968574|gb|ELC85800.1| hypothetical protein A13O_01335 [Escherichia coli KTE189]
gi|430974171|gb|ELC91104.1| hypothetical protein A13S_01662 [Escherichia coli KTE191]
gi|430982394|gb|ELC99084.1| hypothetical protein A13W_00215 [Escherichia coli KTE193]
gi|430983939|gb|ELD00589.1| hypothetical protein A15C_01789 [Escherichia coli KTE201]
gi|430995987|gb|ELD12274.1| hypothetical protein A15K_00928 [Escherichia coli KTE205]
gi|430999562|gb|ELD15644.1| hypothetical protein A15M_01268 [Escherichia coli KTE206]
gi|431017321|gb|ELD30831.1| hypothetical protein A15Y_01211 [Escherichia coli KTE212]
gi|431026874|gb|ELD39941.1| hypothetical protein A173_02102 [Escherichia coli KTE214]
gi|431031292|gb|ELD44190.1| hypothetical protein A177_01379 [Escherichia coli KTE216]
gi|431040640|gb|ELD51174.1| hypothetical protein A17E_00826 [Escherichia coli KTE220]
gi|431043551|gb|ELD53868.1| hypothetical protein A17M_01179 [Escherichia coli KTE224]
gi|431053769|gb|ELD63370.1| hypothetical protein A17Y_01299 [Escherichia coli KTE230]
gi|431085801|gb|ELD91905.1| hypothetical protein A1S3_01476 [Escherichia coli KTE47]
gi|431093609|gb|ELD99274.1| hypothetical protein A1S7_01755 [Escherichia coli KTE49]
gi|431096622|gb|ELE02083.1| hypothetical protein A1SA_01768 [Escherichia coli KTE51]
gi|431101634|gb|ELE06544.1| hypothetical protein A1SE_01613 [Escherichia coli KTE53]
gi|431107149|gb|ELE11335.1| hypothetical protein A1SK_03519 [Escherichia coli KTE56]
gi|431110274|gb|ELE14201.1| hypothetical protein A1SI_01761 [Escherichia coli KTE55]
gi|431122554|gb|ELE25421.1| hypothetical protein A1SO_01648 [Escherichia coli KTE58]
gi|431132100|gb|ELE34116.1| hypothetical protein A1SS_01609 [Escherichia coli KTE60]
gi|431132691|gb|ELE34690.1| hypothetical protein A1SW_01617 [Escherichia coli KTE62]
gi|431139241|gb|ELE41037.1| hypothetical protein A1U7_01893 [Escherichia coli KTE67]
gi|431142506|gb|ELE44254.1| hypothetical protein A1U5_01407 [Escherichia coli KTE66]
gi|431149971|gb|ELE51029.1| hypothetical protein A1UG_01165 [Escherichia coli KTE72]
gi|431155899|gb|ELE56640.1| hypothetical protein A1UM_01399 [Escherichia coli KTE75]
gi|431164592|gb|ELE64983.1| hypothetical protein A1UQ_01480 [Escherichia coli KTE77]
gi|431173206|gb|ELE73287.1| hypothetical protein A1UY_01669 [Escherichia coli KTE81]
gi|431182286|gb|ELE82107.1| hypothetical protein A1W5_01318 [Escherichia coli KTE86]
gi|431192222|gb|ELE91572.1| hypothetical protein A1W7_01484 [Escherichia coli KTE87]
gi|431194901|gb|ELE94115.1| hypothetical protein A1WE_00775 [Escherichia coli KTE93]
gi|431202139|gb|ELF00835.1| hypothetical protein A1WY_01681 [Escherichia coli KTE111]
gi|431212514|gb|ELF10441.1| hypothetical protein A1Y7_01524 [Escherichia coli KTE119]
gi|431216554|gb|ELF14151.1| hypothetical protein A1YU_00601 [Escherichia coli KTE142]
gi|431223444|gb|ELF20691.1| hypothetical protein A31A_01729 [Escherichia coli KTE156]
gi|431228761|gb|ELF25424.1| hypothetical protein A31G_03186 [Escherichia coli KTE161]
gi|431235696|gb|ELF30943.1| hypothetical protein A31I_01239 [Escherichia coli KTE162]
gi|431245488|gb|ELF39773.1| hypothetical protein A31Q_01538 [Escherichia coli KTE171]
gi|431245761|gb|ELF40040.1| hypothetical protein A31M_01184 [Escherichia coli KTE169]
gi|431250514|gb|ELF44573.1| hypothetical protein WCG_03270 [Escherichia coli KTE6]
gi|431258807|gb|ELF51570.1| hypothetical protein WCI_01043 [Escherichia coli KTE8]
gi|431265182|gb|ELF56879.1| hypothetical protein WCK_01702 [Escherichia coli KTE9]
gi|431267605|gb|ELF59122.1| hypothetical protein WE1_01556 [Escherichia coli KTE17]
gi|431274904|gb|ELF65949.1| hypothetical protein WE3_01558 [Escherichia coli KTE18]
gi|431276862|gb|ELF67877.1| hypothetical protein WGK_01640 [Escherichia coli KTE45]
gi|431284927|gb|ELF75768.1| hypothetical protein WGE_01787 [Escherichia coli KTE42]
gi|431285393|gb|ELF76229.1| hypothetical protein WEE_01481 [Escherichia coli KTE23]
gi|431293466|gb|ELF83759.1| hypothetical protein WGG_01181 [Escherichia coli KTE43]
gi|431304359|gb|ELF92888.1| hypothetical protein WEA_00762 [Escherichia coli KTE22]
gi|431310196|gb|ELF98388.1| hypothetical protein A1S1_00997 [Escherichia coli KTE46]
gi|431317325|gb|ELG05105.1| hypothetical protein A1S9_02669 [Escherichia coli KTE50]
gi|431329243|gb|ELG16541.1| hypothetical protein A1SQ_01585 [Escherichia coli KTE59]
gi|431331304|gb|ELG18567.1| hypothetical protein A1SY_01740 [Escherichia coli KTE63]
gi|431340754|gb|ELG27775.1| hypothetical protein A1U3_00844 [Escherichia coli KTE65]
gi|431340892|gb|ELG27912.1| hypothetical protein A1US_01527 [Escherichia coli KTE78]
gi|431344426|gb|ELG31364.1| hypothetical protein A1UU_03013 [Escherichia coli KTE79]
gi|431349461|gb|ELG36290.1| hypothetical protein A1W3_01601 [Escherichia coli KTE84]
gi|431369434|gb|ELG55655.1| hypothetical protein A1Y5_01894 [Escherichia coli KTE118]
gi|431373639|gb|ELG59242.1| hypothetical protein A1YA_03228 [Escherichia coli KTE123]
gi|431396463|gb|ELG79941.1| hypothetical protein A1YS_01501 [Escherichia coli KTE141]
gi|431401497|gb|ELG84841.1| hypothetical protein A1YY_00844 [Escherichia coli KTE144]
gi|431404190|gb|ELG87448.1| hypothetical protein A313_04229 [Escherichia coli KTE147]
gi|431412996|gb|ELG95795.1| hypothetical protein A317_03585 [Escherichia coli KTE154]
gi|431424734|gb|ELH06830.1| hypothetical protein A31K_02903 [Escherichia coli KTE165]
gi|431428671|gb|ELH10612.1| hypothetical protein A13U_01529 [Escherichia coli KTE192]
gi|431434349|gb|ELH15999.1| hypothetical protein A13Y_01550 [Escherichia coli KTE194]
gi|431446421|gb|ELH27170.1| hypothetical protein A133_01554 [Escherichia coli KTE173]
gi|431448251|gb|ELH28969.1| hypothetical protein A135_01602 [Escherichia coli KTE175]
gi|431461715|gb|ELH41982.1| hypothetical protein A153_01719 [Escherichia coli KTE196]
gi|431465909|gb|ELH45989.1| hypothetical protein A13C_00062 [Escherichia coli KTE183]
gi|431469636|gb|ELH49565.1| hypothetical protein A155_01732 [Escherichia coli KTE197]
gi|431477803|gb|ELH57565.1| hypothetical protein A15E_01629 [Escherichia coli KTE202]
gi|431481188|gb|ELH60902.1| hypothetical protein A15S_03591 [Escherichia coli KTE209]
gi|431484251|gb|ELH63931.1| hypothetical protein A15O_01812 [Escherichia coli KTE207]
gi|431493385|gb|ELH72979.1| hypothetical protein A15W_01614 [Escherichia coli KTE211]
gi|431496990|gb|ELH76568.1| hypothetical protein A179_01887 [Escherichia coli KTE217]
gi|431502263|gb|ELH81154.1| hypothetical protein A175_01225 [Escherichia coli KTE215]
gi|431508962|gb|ELH87233.1| hypothetical protein A17A_01833 [Escherichia coli KTE218]
gi|431512649|gb|ELH90739.1| hypothetical protein A17K_01614 [Escherichia coli KTE223]
gi|431516864|gb|ELH94462.1| hypothetical protein A17W_04515 [Escherichia coli KTE229]
gi|431517812|gb|ELH95334.1| hypothetical protein A17S_02058 [Escherichia coli KTE227]
gi|431533936|gb|ELI10427.1| hypothetical protein WI5_01079 [Escherichia coli KTE104]
gi|431538898|gb|ELI14877.1| hypothetical protein WI9_01060 [Escherichia coli KTE106]
gi|431544630|gb|ELI19445.1| hypothetical protein WIA_01138 [Escherichia coli KTE109]
gi|431553256|gb|ELI27183.1| hypothetical protein WIE_01425 [Escherichia coli KTE113]
gi|431558081|gb|ELI31760.1| hypothetical protein WIC_01183 [Escherichia coli KTE112]
gi|431558945|gb|ELI32523.1| hypothetical protein WIG_01085 [Escherichia coli KTE117]
gi|431570066|gb|ELI42993.1| hypothetical protein WII_01154 [Escherichia coli KTE120]
gi|431573106|gb|ELI45917.1| hypothetical protein WIM_01109 [Escherichia coli KTE124]
gi|431586595|gb|ELI57986.1| hypothetical protein WIO_01101 [Escherichia coli KTE125]
gi|431591440|gb|ELI62356.1| hypothetical protein WIS_01048 [Escherichia coli KTE129]
gi|431599560|gb|ELI69265.1| hypothetical protein WIU_01054 [Escherichia coli KTE131]
gi|431604745|gb|ELI74146.1| hypothetical protein WIW_01107 [Escherichia coli KTE133]
gi|431608334|gb|ELI77677.1| hypothetical protein WIY_01083 [Escherichia coli KTE137]
gi|431618574|gb|ELI87542.1| hypothetical protein WK3_01125 [Escherichia coli KTE139]
gi|431621500|gb|ELI90296.1| hypothetical protein WK5_01109 [Escherichia coli KTE145]
gi|431630073|gb|ELI98414.1| hypothetical protein WK9_01206 [Escherichia coli KTE150]
gi|431632844|gb|ELJ01130.1| hypothetical protein WK7_01018 [Escherichia coli KTE148]
gi|431635756|gb|ELJ03924.1| hypothetical protein WKA_01098 [Escherichia coli KTE153]
gi|431647003|gb|ELJ14490.1| hypothetical protein WKC_01031 [Escherichia coli KTE157]
gi|431648572|gb|ELJ15948.1| hypothetical protein WKE_01079 [Escherichia coli KTE160]
gi|431663697|gb|ELJ30452.1| hypothetical protein WKM_00925 [Escherichia coli KTE167]
gi|431664680|gb|ELJ31413.1| hypothetical protein WKO_01200 [Escherichia coli KTE168]
gi|431674375|gb|ELJ40537.1| hypothetical protein WKQ_01194 [Escherichia coli KTE174]
gi|431677353|gb|ELJ43430.1| hypothetical protein WKS_01051 [Escherichia coli KTE176]
gi|431690784|gb|ELJ56258.1| hypothetical protein WKW_01077 [Escherichia coli KTE179]
gi|431692456|gb|ELJ57892.1| hypothetical protein WKY_01153 [Escherichia coli KTE180]
gi|431695252|gb|ELJ60567.1| hypothetical protein WGQ_01143 [Escherichia coli KTE232]
gi|431708017|gb|ELJ72542.1| hypothetical protein WGS_00905 [Escherichia coli KTE88]
gi|431710626|gb|ELJ74999.1| hypothetical protein WGO_01018 [Escherichia coli KTE85]
gi|431724322|gb|ELJ88247.1| hypothetical protein WGW_01190 [Escherichia coli KTE94]
gi|431731858|gb|ELJ95319.1| hypothetical protein WI1_00918 [Escherichia coli KTE97]
gi|431735505|gb|ELJ98863.1| hypothetical protein WI3_01081 [Escherichia coli KTE99]
gi|432348880|gb|ELL43323.1| hypothetical protein B185_005340 [Escherichia coli J96]
gi|441609053|emb|CCP95457.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|441651236|emb|CCQ03211.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|441715382|emb|CCQ04765.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Escherichia coli Nissle 1917]
gi|444541140|gb|ELV20687.1| regulator of RNase III activity [Escherichia coli 99.0814]
gi|444547245|gb|ELV25871.1| regulator of RNase III activity [Escherichia coli 09BKT078844]
gi|444550290|gb|ELV28391.1| regulator of RNase III activity [Escherichia coli 99.0815]
gi|444562793|gb|ELV39836.1| regulator of RNase III activity [Escherichia coli 99.0839]
gi|444564519|gb|ELV41448.1| regulator of RNase III activity [Escherichia coli 99.0816]
gi|444568658|gb|ELV45313.1| regulator of RNase III activity [Escherichia coli 99.0848]
gi|444579105|gb|ELV55120.1| regulator of RNase III activity [Escherichia coli 99.1753]
gi|444582727|gb|ELV58504.1| regulator of RNase III activity [Escherichia coli 99.1775]
gi|444584272|gb|ELV59921.1| regulator of RNase III activity [Escherichia coli 99.1793]
gi|444597629|gb|ELV72596.1| regulator of RNase III activity [Escherichia coli PA11]
gi|444598784|gb|ELV73697.1| regulator of RNase III activity [Escherichia coli ATCC 700728]
gi|444603307|gb|ELV78016.1| regulator of RNase III activity [Escherichia coli 99.1805]
gi|444611784|gb|ELV86105.1| regulator of RNase III activity [Escherichia coli PA19]
gi|444612055|gb|ELV86362.1| regulator of RNase III activity [Escherichia coli PA13]
gi|444619802|gb|ELV93827.1| regulator of RNase III activity [Escherichia coli PA2]
gi|444629780|gb|ELW03452.1| regulator of RNase III activity [Escherichia coli PA47]
gi|444629969|gb|ELW03636.1| regulator of RNase III activity [Escherichia coli PA48]
gi|444634779|gb|ELW08230.1| regulator of RNase III activity [Escherichia coli PA8]
gi|444645213|gb|ELW18286.1| regulator of RNase III activity [Escherichia coli 7.1982]
gi|444647557|gb|ELW20521.1| regulator of RNase III activity [Escherichia coli 99.1781]
gi|444650692|gb|ELW23517.1| regulator of RNase III activity [Escherichia coli 99.1762]
gi|444660300|gb|ELW32672.1| regulator of RNase III activity [Escherichia coli PA35]
gi|444664984|gb|ELW37136.1| regulator of RNase III activity [Escherichia coli 3.4880]
gi|444670733|gb|ELW42595.1| regulator of RNase III activity [Escherichia coli 95.0083]
gi|444673148|gb|ELW44803.1| regulator of RNase III activity [Escherichia coli 99.0670]
gi|449323514|gb|EMD13469.1| hypothetical protein C201_04661 [Escherichia coli S17]
gi|449323554|gb|EMD13508.1| hypothetical protein A364_06055 [Escherichia coli SEPT362]
Length = 177
Score = 42.0 bits (97), Expect = 1.0, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGDLP------AKAVVHTVGP 84
>gi|300935184|ref|ZP_07150210.1| RNase III regulator YmdB [Escherichia coli MS 21-1]
gi|432679518|ref|ZP_19914912.1| hypothetical protein A1YW_01275 [Escherichia coli KTE143]
gi|300459578|gb|EFK23071.1| RNase III regulator YmdB [Escherichia coli MS 21-1]
gi|431223710|gb|ELF20956.1| hypothetical protein A1YW_01275 [Escherichia coli KTE143]
Length = 177
Score = 42.0 bits (97), Expect = 1.0, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKLVV------DVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGDLP------AKAVVHTVGP 84
>gi|419915236|ref|ZP_14433604.1| hypothetical protein ECKD1_18680 [Escherichia coli KD1]
gi|425299459|ref|ZP_18689475.1| RNase III regulator YmdB [Escherichia coli 07798]
gi|388384424|gb|EIL46157.1| hypothetical protein ECKD1_18680 [Escherichia coli KD1]
gi|408220133|gb|EKI44208.1| RNase III regulator YmdB [Escherichia coli 07798]
Length = 177
Score = 42.0 bits (97), Expect = 1.0, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHHAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGDLP------AKAVVHTVGP 84
>gi|322691458|ref|YP_004221028.1| hypothetical protein BLLJ_1269 [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320456314|dbj|BAJ66936.1| conserved hypothetical protein [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 355
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 14/75 (18%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVP---LPSTSPL 420
+ I NAAN +L GGGV AIF AAG + A +R ++ G +VI P LPS
Sbjct: 4 DAIVNAANTQLA-MGGGVCGAIFRAAGVSRMAAACDRFAPIHTGEAVITPGFNLPS---- 58
Query: 421 CGREGVTHVIHVLGP 435
+VIH GP
Sbjct: 59 ------RYVIHTAGP 67
>gi|393236479|gb|EJD44027.1| PNK3P-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 350
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 13/77 (16%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LV+ VG P SGK+ F M+ +ARI D + K G LK+GKSV
Sbjct: 239 LVVFVGRPKSGKTEFYNQHMKQLG--YARIAND-LEFAKVG----------KLLKEGKSV 285
Query: 82 FLDRCNLEREQRTDFVK 98
+D CN +E R +++
Sbjct: 286 VIDNCNPSKEARKKYIR 302
>gi|170780549|ref|YP_001708881.1| hypothetical protein CMS_0093 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155117|emb|CAQ00217.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 177
Score = 42.0 bits (97), Expect = 1.1, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 43/94 (45%), Gaps = 25/94 (26%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL-----EVATAERAKSL 404
GDITR + I NAAN L GGGGV+ AI AAGP L V E L
Sbjct: 9 GDITRQDV------DAIVNAANSSLL-GGGGVDGAIHRAAGPELLAACRRVRADELPDGL 61
Query: 405 YPGNSVIVP---LPSTSPLCGREGVTHVIHVLGP 435
G+++ P LP+ HVIH +GP
Sbjct: 62 PAGDAIATPGFRLPA----------RHVIHTVGP 85
>gi|414145767|pdb|4GP7|A Chain A, Polynucleotide Kinase
gi|414145768|pdb|4GP7|B Chain B, Polynucleotide Kinase
Length = 171
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 13/118 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++G+ GSGKSTF + + + + C+ D ++ +G L S L
Sbjct: 11 LVVLIGSSGSGKSTFAKKHFKPTEVISSDFCRGLXSDDENDQTVTGAAFDVLHYIVSKRL 70
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHE 129
+ GK +D N++ R ++ D H AVV +LP K+C R+ R + +
Sbjct: 71 QLGKLTVVDATNVQESARKPLIEXAK---DYHCFPVAVVFNLPEKVCQERNKNRTDRQ 125
>gi|307106737|gb|EFN54982.1| expressed protein [Chlorella variabilis]
Length = 544
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 87 NLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVVNRMLQ 146
L R QR + GG + + A+ ++LP ++C+ R+ +R H L G +A V+ R L
Sbjct: 9 ELARRQR----QAGGVPIRLLALCIELPPEVCLQRASQRDGH-ATLPGWQAEDVIQRFLS 63
Query: 147 KKELPKLSEGFSRITLCQNENDVQAAL 173
+ + P+ EGF + + ++ A +
Sbjct: 64 EWQYPQGKEGFDGVQVARSSEQAAAVV 90
>gi|47169184|pdb|1SPV|A Chain A, Crystal Structure Of The Putative Phosphatase Of
Escherichia Coli, Northeast Structural Genomoics Target
Er58
Length = 184
Score = 42.0 bits (97), Expect = 1.1, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLX-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGDLP------AKAVVHTVGP 84
>gi|365105867|ref|ZP_09334916.1| UPF0189 protein ymdB [Citrobacter freundii 4_7_47CFAA]
gi|363643049|gb|EHL82380.1| UPF0189 protein ymdB [Citrobacter freundii 4_7_47CFAA]
Length = 180
Score = 42.0 bits (97), Expect = 1.1, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE--RAKSLYPG 407
GDIT + +VI NAAN L GGGGV+ AI AAGPAL A + + + P
Sbjct: 10 GDITTI------AVDVIVNAANSSLL-GGGGVDGAIHRAAGPALLEACKQVIQQQGECPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P VIH +GP
Sbjct: 63 GHAVITLAGALP------AKAVIHTVGP 84
>gi|16082127|ref|NP_394564.1| hypothetical protein Ta1105 [Thermoplasma acidophilum DSM 1728]
gi|10640418|emb|CAC12232.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 213
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGN 408
VGDIT I NAAN L GGGGV+ AI SAAGP L + + YP
Sbjct: 32 VGDITES------DAEAIVNAANSSLM-GGGGVDGAIHSAAGPELNGELVKIRRERYPNG 84
Query: 409 SVIVPLPSTSPLCGREGVTHVIHVLGP 435
+ P + R +H+IH +GP
Sbjct: 85 --LPPGEAVITRGYRLKASHIIHTVGP 109
>gi|298707244|emb|CBJ25871.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 938
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 13/79 (16%)
Query: 42 RSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLGG 101
R P + + QDT+ G++ +C A L+KG V +DRCN ++ QR ++ L
Sbjct: 4 RPGVNPRSLVNQDTL-----GSREKCRRRAQQVLEKGGRVLIDRCNFDQSQRVTWLDL-- 56
Query: 102 PEVDVHAVVLDLPAKLCIS 120
AV L L CI+
Sbjct: 57 ------AVSLSLHKDACIA 69
>gi|386854970|ref|YP_006262710.1| Protein serine-threonine phosphatase, PrpA [Deinococcus gobiensis
I-0]
gi|380002447|gb|AFD27635.1| Protein serine-threonine phosphatase, PrpA [Deinococcus gobiensis
I-0]
Length = 847
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMR-----SSARPWARICQDTINKGKSGTKVQCLT-SASSAL 75
LV +VGA GSGK+T + + SS + D + + L A L
Sbjct: 11 LVALVGASGSGKTTLARRMFQPGEVLSSDAFRVLVANDENEQSATNDAFDSLYFVARKRL 70
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHE-GNL 132
+G +D N++ + R V+L E DV A+ LDLP + R R + G
Sbjct: 71 ARGLLTVIDATNVQADARRRIVEL-AREFDVLPVAIALDLPEDTLVERHRSRTDRPFGAH 129
Query: 133 QGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDV 169
+ A ++ R L+K + +EGF ++T+ + DV
Sbjct: 130 VIAQQAGLLRRSLRKLQ----AEGFRQVTVLKTGEDV 162
>gi|410643986|ref|ZP_11354471.1| hypothetical protein GAGA_0005 [Glaciecola agarilytica NO2]
gi|410136438|dbj|GAC02870.1| hypothetical protein GAGA_0005 [Glaciecola agarilytica NO2]
Length = 174
Score = 42.0 bits (97), Expect = 1.1, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 55/127 (43%), Gaps = 29/127 (22%)
Query: 344 KFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKS 403
+F +GDIT G + I NAA L GG GV+ AI AAGPAL + +
Sbjct: 3 EFEVILGDIT------GANVDAIVNAAKPSLT-GGSGVDGAIHKAAGPAL----LQECMA 51
Query: 404 LYPGNSVIVPLPSTSPL-CGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCE----ILRK 458
L P + + P+ G+ +IH +GP KGCE +L K
Sbjct: 52 LKPHDGIRCPIGEARITGSGQLQCKFIIHTVGP-------------IYKGCENPEALLTK 98
Query: 459 AYTSLFE 465
+YT+ E
Sbjct: 99 SYTNSIE 105
>gi|336322461|ref|YP_004602428.1| Appr-1-p processing protein [Flexistipes sinusarabici DSM 4947]
gi|336106042|gb|AEI13860.1| Appr-1-p processing domain protein [Flexistipes sinusarabici DSM
4947]
Length = 176
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 42/85 (49%), Gaps = 21/85 (24%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLY---PGNSVIVP---LPST 417
+ + NAAN RL P GGGV AI AAG L AE K L PG++VI LP+
Sbjct: 24 DAVVNAANARLMP-GGGVAGAIHRAAGRGL----AEECKPLVPIKPGDAVITGAHNLPN- 77
Query: 418 SPLCGREGVTHVIHVLGPNMNPRRP 442
+HVIH LGP +P
Sbjct: 78 ---------SHVIHCLGPVYGVDKP 93
>gi|385332984|ref|YP_005886935.1| appr-1-p processing domain protein [Marinobacter adhaerens HP15]
gi|311696134|gb|ADP99007.1| appr-1-p processing domain protein [Marinobacter adhaerens HP15]
Length = 177
Score = 42.0 bits (97), Expect = 1.1, Method: Composition-based stats.
Identities = 34/78 (43%), Positives = 39/78 (50%), Gaps = 21/78 (26%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSL---YPGNSVIVP---LPST 417
+VI NAAN L P G GV AI AAGP L AE ++L PG +VI LP+
Sbjct: 20 DVIVNAANAELLP-GSGVAGAIHGAAGPGL----AEECRALAPIRPGQAVISSAHELPN- 73
Query: 418 SPLCGREGVTHVIHVLGP 435
HVIH LGP
Sbjct: 74 ---------QHVIHCLGP 82
>gi|432583077|ref|ZP_19819486.1| hypothetical protein A1SM_02302 [Escherichia coli KTE57]
gi|431119176|gb|ELE22190.1| hypothetical protein A1SM_02302 [Escherichia coli KTE57]
Length = 177
Score = 42.0 bits (97), Expect = 1.1, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKLTV------DVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGDLP------AKAVVHTVGP 84
>gi|417711473|ref|ZP_12360475.1| macro domain protein [Shigella flexneri K-272]
gi|417715801|ref|ZP_12364734.1| macro domain protein [Shigella flexneri K-227]
gi|333009587|gb|EGK29039.1| macro domain protein [Shigella flexneri K-272]
gi|333020545|gb|EGK39805.1| macro domain protein [Shigella flexneri K-227]
Length = 177
Score = 41.6 bits (96), Expect = 1.2, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGDLP------AKAVVHTVGP 84
>gi|24112446|ref|NP_706956.1| RNase III inhibitor [Shigella flexneri 2a str. 301]
gi|30062570|ref|NP_836741.1| hypothetical protein S1115 [Shigella flexneri 2a str. 2457T]
gi|110805054|ref|YP_688574.1| hypothetical protein SFV_1057 [Shigella flexneri 5 str. 8401]
gi|384542668|ref|YP_005726730.1| putative polyprotein [Shigella flexneri 2002017]
gi|415853866|ref|ZP_11529756.1| macro domain protein [Shigella flexneri 2a str. 2457T]
gi|417701703|ref|ZP_12350828.1| macro domain protein [Shigella flexneri K-218]
gi|417722299|ref|ZP_12371128.1| macro domain protein [Shigella flexneri K-304]
gi|417728022|ref|ZP_12376746.1| macro domain protein [Shigella flexneri K-671]
gi|417732638|ref|ZP_12381303.1| macro domain protein [Shigella flexneri 2747-71]
gi|417742615|ref|ZP_12391160.1| regulator of RNase III activity [Shigella flexneri 2930-71]
gi|418254848|ref|ZP_12879423.1| regulator of RNase III activity [Shigella flexneri 6603-63]
gi|420340862|ref|ZP_14842374.1| hypothetical protein SFK404_1459 [Shigella flexneri K-404]
gi|420371243|ref|ZP_14871684.1| hypothetical protein SF123566_1672 [Shigella flexneri 1235-66]
gi|424837506|ref|ZP_18262143.1| hypothetical protein SF5M90T_1042 [Shigella flexneri 5a str. M90T]
gi|122957527|sp|Q0T5Z6.1|YMDB_SHIF8 RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|24051327|gb|AAN42663.1| putative polyprotein [Shigella flexneri 2a str. 301]
gi|30040816|gb|AAP16547.1| putative polyprotein [Shigella flexneri 2a str. 2457T]
gi|110614602|gb|ABF03269.1| putative polyprotein [Shigella flexneri 5 str. 8401]
gi|281600453|gb|ADA73437.1| putative polyprotein [Shigella flexneri 2002017]
gi|313650698|gb|EFS15099.1| macro domain protein [Shigella flexneri 2a str. 2457T]
gi|332759861|gb|EGJ90162.1| macro domain protein [Shigella flexneri 2747-71]
gi|332760173|gb|EGJ90469.1| macro domain protein [Shigella flexneri K-671]
gi|332767843|gb|EGJ98034.1| regulator of RNase III activity [Shigella flexneri 2930-71]
gi|333005674|gb|EGK25192.1| macro domain protein [Shigella flexneri K-218]
gi|333019683|gb|EGK38959.1| macro domain protein [Shigella flexneri K-304]
gi|383466558|gb|EID61579.1| hypothetical protein SF5M90T_1042 [Shigella flexneri 5a str. M90T]
gi|391271807|gb|EIQ30672.1| hypothetical protein SFK404_1459 [Shigella flexneri K-404]
gi|391319449|gb|EIQ76456.1| hypothetical protein SF123566_1672 [Shigella flexneri 1235-66]
gi|397899774|gb|EJL16145.1| regulator of RNase III activity [Shigella flexneri 6603-63]
Length = 177
Score = 41.6 bits (96), Expect = 1.2, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGDLP------AKAVVHTVGP 84
>gi|411120299|ref|ZP_11392675.1| putative kinase [Oscillatoriales cyanobacterium JSC-12]
gi|410710455|gb|EKQ67966.1| putative kinase [Oscillatoriales cyanobacterium JSC-12]
Length = 180
Score = 41.6 bits (96), Expect = 1.2, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 18/121 (14%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTI------NKGKSGTKV-------QCL 68
L++++G PGSGKST H+++ + W I D I ++G G+ + Q
Sbjct: 4 LLLLIGLPGSGKSTLAAHLIQDCPKRWL-ISTDAIRARLYGDEGIQGSWLAIWHEVGQQF 62
Query: 69 TSASSALKKGKS--VFLDRCNLEREQRTDFVKLGGPE--VDVHAVVLDLPAKLCISRSVK 124
A ++ G++ D N+ R+QR + L + + L+ P +LC+ R+
Sbjct: 63 RQAVQYIQAGEASQAIYDATNVVRKQRRQAIALARASGFTRITGLWLNTPIRLCVQRNEN 122
Query: 125 R 125
R
Sbjct: 123 R 123
>gi|395771011|ref|ZP_10451526.1| phosphatase [Streptomyces acidiscabies 84-104]
Length = 849
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTIN---KGKSGTK--VQCLTS-ASSAL 75
LV++VGA GSGKSTF + + + C+ ++ +S TK L A L
Sbjct: 18 LVVLVGASGSGKSTFAARHFKRTEIISSDFCRGLVSDDENDQSATKDAFDVLHYIAGKRL 77
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKRIEHEGNLQ 133
G+ +D +++ + R + L + DV A+VLD+P ++C R+ R + +
Sbjct: 78 AAGRRTVVDATSVQPDARRQLIDL-ARKFDVLPIAIVLDVPEEVCAERNASRSD-----R 131
Query: 134 GGKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAA 172
V+ R + ++ L L EGF ++ + + ++ AA
Sbjct: 132 ADMPRRVIKRHIGELRRSLRHLEREGFRKVHVLRGVAEIDAA 173
>gi|432361784|ref|ZP_19604967.1| hypothetical protein WCE_00809 [Escherichia coli KTE5]
gi|430889244|gb|ELC11912.1| hypothetical protein WCE_00809 [Escherichia coli KTE5]
Length = 177
Score = 41.6 bits (96), Expect = 1.2, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGDLP------AKAVVHTVGP 84
>gi|417235872|ref|ZP_12034691.1| macro domain protein [Escherichia coli 9.0111]
gi|386214825|gb|EII25233.1| macro domain protein [Escherichia coli 9.0111]
Length = 177
Score = 41.6 bits (96), Expect = 1.2, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGALP------AKAVVHSVGP 84
>gi|416286863|ref|ZP_11648648.1| hypothetical protein SGB_04303 [Shigella boydii ATCC 9905]
gi|320178523|gb|EFW53488.1| hypothetical protein SGB_04303 [Shigella boydii ATCC 9905]
Length = 177
Score = 41.6 bits (96), Expect = 1.2, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGDLP------AKAVVHTVGP 84
>gi|258651185|ref|YP_003200341.1| bis(5'-nucleosyl)-tetraphosphatase [Nakamurella multipartita DSM
44233]
gi|258554410|gb|ACV77352.1| Bis(5'-nucleosyl)-tetraphosphatase(asymmetrical) [Nakamurella
multipartita DSM 44233]
Length = 852
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV+++G GSGKSTF R + + C+ D ++ + Q L A L
Sbjct: 12 LVVLIGVSGSGKSTFARTHFRPTEVISSDFCRGLVADDENDQAATPLAFQLLDYIAGLRL 71
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKR 125
G+ +D N++ E R V L E DV A+VLD+P ++ + R+ R
Sbjct: 72 AAGRLTVVDATNVQPEARRRLVALAR-EHDVLPVAIVLDVPERVALDRNASR 122
>gi|424669958|ref|ZP_18106983.1| UPF0189 protein [Stenotrophomonas maltophilia Ab55555]
gi|401071034|gb|EJP79547.1| UPF0189 protein [Stenotrophomonas maltophilia Ab55555]
Length = 199
Score = 41.6 bits (96), Expect = 1.2, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 45/89 (50%), Gaps = 15/89 (16%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPG-- 407
GDIT L + I NAAN L GGGGV+ AI AAGPAL +A E+ L PG
Sbjct: 8 GDITTL------AVDAIVNAANETLL-GGGGVDGAIHRAAGPAL-LAECEQLPELRPGVR 59
Query: 408 -NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
+ V S L R +V+H +GP
Sbjct: 60 CPTGEVRATSAYALPAR----YVLHTVGP 84
>gi|432860867|ref|ZP_20085951.1| hypothetical protein A311_01679 [Escherichia coli KTE146]
gi|431406876|gb|ELG90095.1| hypothetical protein A311_01679 [Escherichia coli KTE146]
Length = 177
Score = 41.6 bits (96), Expect = 1.2, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGDLP------AKAVVHTVGP 84
>gi|241998364|ref|XP_002433825.1| MACRO domain-containing protein, putative [Ixodes scapularis]
gi|215495584|gb|EEC05225.1| MACRO domain-containing protein, putative [Ixodes scapularis]
Length = 304
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 31/51 (60%), Gaps = 7/51 (13%)
Query: 344 KFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALE 394
K FVGDIT L + I NAAN RL GGGGV+ AI SAAGP L+
Sbjct: 137 KVSIFVGDIT------ALEIDAIVNAANNRLL-GGGGVDGAIHSAAGPKLK 180
>gi|334351257|sp|D2TT52.2|YMDB_CITRI RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
Length = 177
Score = 41.6 bits (96), Expect = 1.3, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 43/89 (48%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAK-SLYP 406
GDIT + + I NAAN L GGGGV+ AI AAGP L A T R + P
Sbjct: 10 GDITTV------AVDAIVNAANPSLM-GGGGVDGAIHRAAGPELLEACMTVRRQQGECPP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI GR VIH +GP
Sbjct: 63 GHAVITA-------AGRLPAKAVIHTVGP 84
>gi|417738024|ref|ZP_12386619.1| macro domain protein [Shigella flexneri 4343-70]
gi|332758588|gb|EGJ88908.1| macro domain protein [Shigella flexneri 4343-70]
Length = 170
Score = 41.6 bits (96), Expect = 1.3, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 3 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 55
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 56 GHAVITLAGDLP------AKAVVHTVGP 77
>gi|419374905|ref|ZP_13915945.1| regulator of RNase III activity, partial [Escherichia coli DEC14B]
gi|378223290|gb|EHX83515.1| regulator of RNase III activity, partial [Escherichia coli DEC14B]
Length = 119
Score = 41.6 bits (96), Expect = 1.3, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGALP------AKAVVHTVGP 84
>gi|158317902|ref|YP_001510410.1| hypothetical protein Franean1_6160 [Frankia sp. EAN1pec]
gi|158113307|gb|ABW15504.1| Appr-1-p processing domain protein [Frankia sp. EAN1pec]
Length = 174
Score = 41.6 bits (96), Expect = 1.3, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGR 423
+ I NAA L GGGGV+ AI +A GP + A PG + +T+ GR
Sbjct: 17 DAIVNAAKSSLL-GGGGVDGAIHAAGGPDILAACRRLRAGALPGGLPVGEAVATT--AGR 73
Query: 424 EGVTHVIHVLGPNMNP 439
HVIH +GP P
Sbjct: 74 LTAKHVIHTVGPVHTP 89
>gi|432805167|ref|ZP_20039108.1| hypothetical protein A1WA_01068 [Escherichia coli KTE91]
gi|432933605|ref|ZP_20133273.1| hypothetical protein A13E_02421 [Escherichia coli KTE184]
gi|433193076|ref|ZP_20377084.1| hypothetical protein WGU_01393 [Escherichia coli KTE90]
gi|431356779|gb|ELG43469.1| hypothetical protein A1WA_01068 [Escherichia coli KTE91]
gi|431455247|gb|ELH35603.1| hypothetical protein A13E_02421 [Escherichia coli KTE184]
gi|431719144|gb|ELJ83204.1| hypothetical protein WGU_01393 [Escherichia coli KTE90]
Length = 177
Score = 41.6 bits (96), Expect = 1.3, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPA+ A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPAMLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGALP------AKAVVHTVGP 84
>gi|254479356|ref|ZP_05092692.1| hypothetical protein CDSM653_761 [Carboxydibrachium pacificum DSM
12653]
gi|214034695|gb|EEB75433.1| hypothetical protein CDSM653_761 [Carboxydibrachium pacificum DSM
12653]
Length = 183
Score = 41.6 bits (96), Expect = 1.3, Method: Composition-based stats.
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARP-WARICQDTINKGKSG------TKVQCLTSASSA 74
LV++VG PG+GKSTF + + RP + D + K G + Q + SA
Sbjct: 4 LVLLVGLPGAGKSTFAAELKKK--RPDIVVVSSDEVRKYFFGVVFEPKVEKQVWSIVHSA 61
Query: 75 ----LKKGKSVFLDRCNLEREQRTDFVKLGG-PEVDVHAVVLDLPAKLCISRSVKRIEHE 129
LK GK+V LD NL R R +++ G + V AV ++ P + ++ R
Sbjct: 62 VIGNLKLGKTVVLDATNLTRSARYKWIRWAGWFKKPVIAVFINPPLETVFKQNAMR---- 117
Query: 130 GNLQGGKAAAVVNRMLQKK----ELPKLSEGFSRI 160
K V ++KK ++P++ EGF +
Sbjct: 118 -----EKEWVVPEEEMRKKVMILKVPQMEEGFYSV 147
>gi|338812962|ref|ZP_08625110.1| kinase-like protein [Acetonema longum DSM 6540]
gi|337275045|gb|EGO63534.1| kinase-like protein [Acetonema longum DSM 6540]
Length = 171
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 24/148 (16%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQ----------CLTSA 71
LVI VG P SGKS S + +C DTI G++ T
Sbjct: 11 LVITVGLPLSGKSILARRCAESGPKI-VVVCPDTIRLALHGSQFVGSAEPFVWAIAQTMV 69
Query: 72 SSALKKGKSVFLDRCNLEREQRTDFVKLG---GPEVDVHAVVLDLPAKLCISRSVKRIEH 128
+ LK+G +V +D N E+R +V++ G V ++ V D C +R+ +
Sbjct: 70 RTLLKEGYTVIVDATNTTVERRRIWVQMSKEFGKRVAIYHV--DTDYATCCARN----QR 123
Query: 129 EGNLQGGKAAAVVNRMLQKKELPKLSEG 156
G L +A+++RM ++ E P +EG
Sbjct: 124 HGRLD----SAIIDRMHRQFEPPAKAEG 147
>gi|283784842|ref|YP_003364707.1| DNA and/or RNA unwinding protein [Citrobacter rodentium ICC168]
gi|282948296|emb|CBG87876.1| putative DNA and/or RNA unwinding protein [Citrobacter rodentium
ICC168]
Length = 187
Score = 41.6 bits (96), Expect = 1.4, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 43/89 (48%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAK-SLYP 406
GDIT + + I NAAN L GGGGV+ AI AAGP L A T R + P
Sbjct: 20 GDITTV------AVDAIVNAANPSLM-GGGGVDGAIHRAAGPELLEACMTVRRQQGECPP 72
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI GR VIH +GP
Sbjct: 73 GHAVITA-------AGRLPAKAVIHTVGP 94
>gi|225848217|ref|YP_002728380.1| appr-1-p processing [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644231|gb|ACN99281.1| appr-1-p processing [Sulfurihydrogenibium azorense Az-Fu1]
Length = 188
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 49/117 (41%), Gaps = 19/117 (16%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGN 408
VGDIT T I NAAN L GG GV+ AI S GP++ E K+LYP
Sbjct: 14 VGDITEADT------QAIVNAANSSLM-GGLGVDGAIHSKGGPSILEECKEIRKTLYPDG 66
Query: 409 SVIVPLPSTSPLC---GREGVTHVIHVLGP----NMNPRRPNCLDGDYVKGCEILRK 458
LP+ + G +VIH +GP M + L Y I +K
Sbjct: 67 -----LPTGEAIITSGGNLKAKYVIHTVGPICSGVMTEKEKKLLSNAYRNSLSIAKK 118
>gi|300864851|ref|ZP_07109699.1| putative Polynucleotide kinase [Oscillatoria sp. PCC 6506]
gi|300337144|emb|CBN54849.1| putative Polynucleotide kinase [Oscillatoria sp. PCC 6506]
Length = 275
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 13/117 (11%)
Query: 26 VGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTK--------VQCLTSAS--SAL 75
+G P SGKS F ++ S W R +D + + + + L A+ AL
Sbjct: 1 MGLPASGKSKFANDLLLSEPGRWVRTNKDLLREMAHASYWSPANEKFILQLRDAAILMAL 60
Query: 76 KKGKSVFLDRCNL--EREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEG 130
+ GK+V +D N E VK G V+V+ L +P + CI R +KR+ G
Sbjct: 61 ESGKNVIVDDTNFGPHIEHIKALVK-GQAVVEVNDSFLQVPLEECIKRDLKRLNSVG 116
>gi|377577540|ref|ZP_09806522.1| O-acetyl-ADP-ribose deacetylase YmdB [Escherichia hermannii NBRC
105704]
gi|377541278|dbj|GAB51687.1| O-acetyl-ADP-ribose deacetylase YmdB [Escherichia hermannii NBRC
105704]
Length = 180
Score = 41.2 bits (95), Expect = 1.5, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDIT + T +VI NAAN L GGGGV+ AI AAGPAL A ++ +
Sbjct: 10 GDITLMTT------DVIVNAANASLM-GGGGVDGAIHRAAGPALMEACKQVRQQQGTCPT 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI G V+H +GP
Sbjct: 63 GHAVITG-------AGNLAAKAVVHAVGP 84
>gi|303248940|ref|ZP_07335187.1| Appr-1-p processing domain protein [Desulfovibrio fructosovorans
JJ]
gi|302489663|gb|EFL49599.1| Appr-1-p processing domain protein [Desulfovibrio fructosovorans
JJ]
Length = 184
Score = 41.2 bits (95), Expect = 1.5, Method: Composition-based stats.
Identities = 38/98 (38%), Positives = 46/98 (46%), Gaps = 22/98 (22%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVA----TAERAKSLYPGNSVIVP---LPS 416
+ I NAAN L GGGGV+ AI AAGP L A AE + L G +VI P LP+
Sbjct: 27 DAIVNAANSALA-GGGGVDGAIHRAAGPGLPEACRAIIAEIGR-LPAGGAVITPGFDLPA 84
Query: 417 TSPLCGREGVTHVIHVLGP---NMNPRRPNCLDGDYVK 451
H+IH +GP N P L YV+
Sbjct: 85 ----------RHIIHTVGPIWRGGNEGEPERLRSAYVE 112
>gi|256391430|ref|YP_003112994.1| Appr-1-p processing protein [Catenulispora acidiphila DSM 44928]
gi|256357656|gb|ACU71153.1| Appr-1-p processing domain protein [Catenulispora acidiphila DSM
44928]
Length = 185
Score = 41.2 bits (95), Expect = 1.5, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPA-LEVATAERAKSLYPGN 408
GDIT+ + + I NAAN L GGGGV+ AI A GP LE A RA G
Sbjct: 24 GDITKQHA------DAIVNAANSSLL-GGGGVDGAIHRAGGPEILEACRALRASHYGRGL 76
Query: 409 SVIVPLPSTSPLCGREGVTHVIHVLGPNMNP 439
+ +T+ GR VIH +GP +P
Sbjct: 77 PTGQAVATTA---GRLPAHWVIHTVGPVYSP 104
>gi|333373794|ref|ZP_08465697.1| serine/threonine protein phosphatase 1, partial [Desmospora sp.
8437]
gi|332969291|gb|EGK08318.1| serine/threonine protein phosphatase 1 [Desmospora sp. 8437]
Length = 379
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 33/204 (16%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCL-TSASSAL 75
LV+++GA GSGKSTF + + + C+ D ++ + + L + L
Sbjct: 13 LVLLIGASGSGKSTFASQHFQQTEVVSSDFCRGLVSDDENDQSATPAAFEVLHMIVAKRL 72
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHEGN 131
+ GK +D N+ +E R ++L H A++LD+ K+C R+ R + N
Sbjct: 73 QLGKLTVVDATNVRKEDRQSLIRLAREH---HCLPVAILLDVGEKICRERN--RTREDRN 127
Query: 132 LQGGKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAAL--------DTYSGLG 180
VV+R Q ++ L L E F R+ ++ ++V A+ + G
Sbjct: 128 F----GPHVVSRQYQALRRSLRGLKREEFRRVYRLRDPDEVNRAVILREPPWCNKKEEQG 183
Query: 181 PLDTLP--HGSFGQKNPDAKIQLG 202
P D + HG F ++ D ++LG
Sbjct: 184 PFDIIGDVHGCF-RELQDLLLKLG 206
>gi|384449373|ref|YP_005661975.1| hypothetical protein CPK_ORF00876 [Chlamydophila pneumoniae LPCoLN]
gi|269303243|gb|ACZ33343.1| conserved hypothetical protein [Chlamydophila pneumoniae LPCoLN]
Length = 377
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 10/135 (7%)
Query: 342 PKKFFTFVGDIT--RLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE 399
P GDI RL T G + +I NAAN ++ GG G NAA+ +A P T
Sbjct: 160 PITLVATTGDIAKPRLKTSGRV---MIVNAANSNMQSGGAGTNAALSAATHPTCWNNTRT 216
Query: 400 RAKSLYPGNSVIVPLPSTSPLCGREGVTH-----VIHVLGPNMNPRRPNCLDGDYVKGCE 454
+ G + V ++P R+G + H L + P+ L K +
Sbjct: 217 SGGKINTGKGLSVGECRSAPWINRDGTNNDTNPGEAHFLAQLLGPKYEGELKAHPEKLSD 276
Query: 455 ILRKAYTSLFEGFLS 469
+++KAY + F+ L+
Sbjct: 277 VIKKAYLNCFDEALN 291
>gi|284028975|ref|YP_003378906.1| Appr-1-p processing domain-containing protein [Kribbella flavida
DSM 17836]
gi|283808268|gb|ADB30107.1| Appr-1-p processing domain protein [Kribbella flavida DSM 17836]
Length = 167
Score = 41.2 bits (95), Expect = 1.5, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 15/97 (15%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSP---L 420
+ I NAA+ L+ GGGGV+ AI A GPA+ +R YP LP+
Sbjct: 16 DAIVNAAHHALR-GGGGVDGAIHRAGGPAILAELVQR----YPDG-----LPTGEAGWTT 65
Query: 421 CGREGVTHVIHVLGPNMNP--RRPNCLDGDYVKGCEI 455
G ++VIHV+GPN R P L+ Y I
Sbjct: 66 AGDLPASYVIHVVGPNHTAGQRDPALLESCYRNALRI 102
>gi|440225635|ref|YP_007332726.1| hypothetical protein RTCIAT899_CH03835 [Rhizobium tropici CIAT 899]
gi|440037146|gb|AGB70180.1| hypothetical protein RTCIAT899_CH03835 [Rhizobium tropici CIAT 899]
Length = 187
Score = 41.2 bits (95), Expect = 1.5, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 44/95 (46%), Gaps = 15/95 (15%)
Query: 344 KFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKS 403
+F +GDIT+L + I NAAN L GGGGV+ AI AAGP L +A
Sbjct: 18 RFTVALGDITKLPV------DAIVNAANSSLL-GGGGVDGAIHRAAGPDL-LAECRSLNG 69
Query: 404 LYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMN 438
G + I + R HVIH +GP N
Sbjct: 70 CRTGQAKIT-------MGYRLPARHVIHTVGPVWN 97
>gi|152965163|ref|YP_001360947.1| metallophosphoesterase [Kineococcus radiotolerans SRS30216]
gi|151359680|gb|ABS02683.1| metallophosphoesterase [Kineococcus radiotolerans SRS30216]
Length = 863
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 20/180 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSS---ARPWAR--ICQDTINKGKSGTKVQCLTS-ASSAL 75
LV++VG GSGKSTF R + + W R + D ++ + + L L
Sbjct: 12 LVVLVGTTGSGKSTFARANFRRTEVISSDWCRGIVSDDENDQSATKDAFEVLEFIVGKRL 71
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
+ +D N+++ R V L +V A+VLDLP LC R+ R + +
Sbjct: 72 AANRLTVVDATNVQQSARRSLVALARAHDVLPVAIVLDLPEALCAERNRARPDRD----F 127
Query: 135 GKAAAVVNRMLQKKELPKLS-EGFSRITLCQNENDVQAALDTYSGL--------GPLDTL 185
G R K+ L L+ EGF + + ++ +V T + L GP D +
Sbjct: 128 GPHVLRRQRAELKRSLKGLAREGFRTVHVLRDPAEVDDVTVTRTRLHTDRRDETGPFDVV 187
>gi|225448685|ref|XP_002280352.1| PREDICTED: macro domain-containing protein VPA0103 [Vitis vinifera]
gi|147769460|emb|CAN70345.1| hypothetical protein VITISV_012577 [Vitis vinifera]
Length = 231
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT+ + G + I N AN R+ GGGG + AI AAGP L VA + + PG
Sbjct: 62 GDITKWFVDGS--SDAIVNPANERML-GGGGADGAIHRAAGPEL-VAACYKVPEVRPG-- 115
Query: 410 VIVPLPSTSPLCG-REGVTHVIHVLGP 435
+ P G + HVIH +GP
Sbjct: 116 IRCPTGEARITQGFKLPAAHVIHTVGP 142
>gi|403070624|ref|ZP_10911956.1| hypothetical protein ONdio_13661 [Oceanobacillus sp. Ndiop]
Length = 184
Score = 41.2 bits (95), Expect = 1.6, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 45/107 (42%), Gaps = 20/107 (18%)
Query: 340 INPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL-----E 394
IN VGDIT T I NAAN L+ GGGGV+ AI AAG L +
Sbjct: 5 INDNTLALMVGDITEQET------EAIVNAANGLLQ-GGGGVDGAIHRAAGKDLLEECQK 57
Query: 395 VATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGP--NMNP 439
+ AE P VI+ P VIH +GP N NP
Sbjct: 58 IRQAELKGEELPTGEVIITAGYNLP------ANFVIHTVGPVWNENP 98
>gi|341890607|gb|EGT46542.1| hypothetical protein CAEBREN_25248 [Caenorhabditis brenneri]
Length = 201
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDITR+ + I NAAN RL GGGGV+ AI +AAG + A + G++
Sbjct: 31 GDITRI------SIDAIVNAANSRL-AGGGGVDGAIHNAAGRSELQAQCRQYNGCAVGDA 83
Query: 410 VIVPLPSTSPLCGREGVTHVIHVLGPNM 437
+I + C + +IH +GP +
Sbjct: 84 II------TSGCRMTHIKKIIHTVGPQV 105
>gi|218549225|ref|YP_002383016.1| hypothetical protein EFER_1884 [Escherichia fergusonii ATCC 35469]
gi|218356766|emb|CAQ89394.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
Length = 182
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 44/101 (43%), Gaps = 15/101 (14%)
Query: 337 QKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA 396
Q + + GDIT+L +VI NAAN L GGGGV+ AI AAGP L A
Sbjct: 2 QGGVMKSRIHVLQGDITQL------AVDVIVNAANSSLM-GGGGVDGAIHRAAGPELLEA 54
Query: 397 --TAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
R + P ++ + P VIH +GP
Sbjct: 55 CQKVRRQQGECPTGHAVITIAGNLP------ARAVIHTVGP 89
>gi|54025669|ref|YP_119911.1| hypothetical protein nfa36990 [Nocardia farcinica IFM 10152]
gi|54017177|dbj|BAD58547.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 167
Score = 41.2 bits (95), Expect = 1.7, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT + + NAAN L GGGGV+ AI GPA+ E + YP
Sbjct: 9 GDITEQRV------DAVVNAANSSLS-GGGGVDGAIHRRGGPAILAECRELRATRYPDG- 60
Query: 410 VIVPLPSTSPLCGREG---VTHVIHVLGPNMNPRR 441
LP+ + G VIH +GP +PR+
Sbjct: 61 ----LPTGQAVATTAGELPARWVIHTVGPVWSPRQ 91
>gi|297736490|emb|CBI25361.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT+ + G + I N AN R+ GGGG + AI AAGP L VA + + PG
Sbjct: 21 GDITKWFVDGS--SDAIVNPANERML-GGGGADGAIHRAAGPEL-VAACYKVPEVRPG-- 74
Query: 410 VIVPLPSTSPLCG-REGVTHVIHVLGP 435
+ P G + HVIH +GP
Sbjct: 75 IRCPTGEARITQGFKLPAAHVIHTVGP 101
>gi|325957648|ref|YP_004293060.1| Appr-1-p processing domain-containing protein [Lactobacillus
acidophilus 30SC]
gi|385818351|ref|YP_005854741.1| Appr-1-p processing protein [Lactobacillus amylovorus GRL1118]
gi|325334213|gb|ADZ08121.1| Appr-1-p processing domain protein [Lactobacillus acidophilus 30SC]
gi|327184289|gb|AEA32736.1| Appr-1-p processing domain-containing protein [Lactobacillus
amylovorus GRL1118]
Length = 167
Score = 41.2 bits (95), Expect = 1.7, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 24/107 (22%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT++ + I NAAN L GGGGV+ AI +AAGP L + + G++
Sbjct: 9 GDITKMKA------DAIVNAANNSLL-GGGGVDGAIHAAAGPHL-LEECMTLHGCHTGDA 60
Query: 410 VIV---PLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGC 453
I LP+ HVIH +GP + + +C D ++ C
Sbjct: 61 KITLGYDLPA----------KHVIHTVGPVYSGKSSDC---DMLRAC 94
>gi|300816744|ref|ZP_07096964.1| macro domain protein [Escherichia coli MS 107-1]
gi|300530518|gb|EFK51580.1| macro domain protein [Escherichia coli MS 107-1]
Length = 103
Score = 41.2 bits (95), Expect = 1.8, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGALP------AKAVVHTVGP 84
>gi|196006888|ref|XP_002113310.1| hypothetical protein TRIADDRAFT_27195 [Trichoplax adhaerens]
gi|190583714|gb|EDV23784.1| hypothetical protein TRIADDRAFT_27195, partial [Trichoplax
adhaerens]
Length = 179
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 43/95 (45%), Gaps = 21/95 (22%)
Query: 344 KFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKS 403
K + F GDIT L + I NAAN L GGGGV+ AI AAG L R
Sbjct: 1 KIYLFRGDITTLEI------DAIVNAANSSLL-GGGGVDGAIHRAAGREL-ADECYRLNG 52
Query: 404 LYPGNSVIVP---LPSTSPLCGREGVTHVIHVLGP 435
PGN+ I LP+ HVIH +GP
Sbjct: 53 CEPGNAKITKGYRLPA----------KHVIHTVGP 77
>gi|315039175|ref|YP_004032743.1| Appr-1-p processing protein [Lactobacillus amylovorus GRL 1112]
gi|312277308|gb|ADQ59948.1| Appr-1-p processing domain protein [Lactobacillus amylovorus GRL
1112]
Length = 167
Score = 41.2 bits (95), Expect = 1.8, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 24/107 (22%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT++ + I NAAN L GGGGV+ AI +AAGP L + + G++
Sbjct: 9 GDITKMKA------DAIVNAANNSLL-GGGGVDGAIHAAAGPHL-LEECMTLHGCHTGDA 60
Query: 410 VIV---PLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGC 453
I LP+ HVIH +GP + + +C D ++ C
Sbjct: 61 KITLGYDLPA----------KHVIHTVGPVYSGKSSDC---DMLRAC 94
>gi|327275951|ref|XP_003222735.1| PREDICTED: bifunctional polynucleotide phosphatase/kinase-like
[Anolis carolinensis]
Length = 568
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 11/141 (7%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
LV+ VG P +GKSTF + + S + +DT+ G+ +C+ ++L+ GK V
Sbjct: 413 LVVAVGFPAAGKSTFLKKHLVSVG--YVHSNRDTL-----GSWQKCVAMCQASLQAGKRV 465
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAA--A 139
+D N + E R F++ E V A L ++ R E +G
Sbjct: 466 VVDNTNPDLESRQRFIECAK-EAGVPCRCFLFTASLEQAKHNNRFR-EMTEKGHVPVNDI 523
Query: 140 VVNRMLQKKELPKLSEGFSRI 160
V+N K P L EGFS I
Sbjct: 524 VLNTYKSKYVEPSLEEGFSEI 544
>gi|374580204|ref|ZP_09653298.1| putative kinase [Desulfosporosinus youngiae DSM 17734]
gi|374416286|gb|EHQ88721.1| putative kinase [Desulfosporosinus youngiae DSM 17734]
Length = 893
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 22/152 (14%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV ++G GSGKSTF + + + +C+ D ++ + + L A+ L
Sbjct: 10 LVALMGPSGSGKSTFARDHFKHTEVLSSDVCRGLVADDENDQAATKDAFEVLYYIAAKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHEGN 131
GK +D N++ E R V L H A+V +LP K+C R+++R + +
Sbjct: 70 AAGKLTVIDATNVQFEARKPIVDLAR---RYHCLPVAIVFNLPEKICQERNIQRADRDFG 126
Query: 132 LQGGKAAAVVNRMLQ--KKELPKL-SEGFSRI 160
V+ R + ++ L KL EGF +
Sbjct: 127 PH------VIRRQAEQLRRSLAKLKKEGFRHV 152
>gi|431919735|gb|ELK18092.1| Poly [ADP-ribose] polymerase 14 [Pteropus alecto]
Length = 1732
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGN 408
+GD+TR V+ N+AN L+ GG + AA+ AAGP L+ E +
Sbjct: 736 LGDLTRF------PVEVVVNSANEDLRLSGG-LAAALSKAAGPELQ----EDCDKIVKER 784
Query: 409 SVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNC 444
I+P +T GR HVIH +GP C
Sbjct: 785 GKILPGRATISKAGRLPYHHVIHAVGPKWKKDDARC 820
>gi|320333145|ref|YP_004169856.1| Appr-1-p processing protein [Deinococcus maricopensis DSM 21211]
gi|319754434|gb|ADV66191.1| Appr-1-p processing domain protein [Deinococcus maricopensis DSM
21211]
Length = 172
Score = 41.2 bits (95), Expect = 1.9, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 366 IANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGREG 425
+ AAN +L GGGGV+ I AAGP L A + + G +VI P + G +G
Sbjct: 18 VTTAANAQLM-GGGGVDGVIHRAAGPDLLRAIRQLGGTP-TGTAVITPAFNL----GAQG 71
Query: 426 VTHVIHVLGPNMN 438
V +VIH +GP N
Sbjct: 72 VKYVIHAVGPIWN 84
>gi|148908718|gb|ABR17466.1| unknown [Picea sitchensis]
Length = 231
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT+ G + I NAAN RL GGGGV+ AI AAGP L A + +P S
Sbjct: 61 GDITKWTVDGH--TDAIVNAANERLL-GGGGVDGAIHRAAGPDLLKACRQ-----FPKVS 112
Query: 410 VIVPLPSTSPLCGREG---VTHVIHVLGP 435
+ P S R V+ +IH +GP
Sbjct: 113 RGIRCPVGSARITRGFNLPVSRIIHTVGP 141
>gi|17231223|ref|NP_487771.1| protein serine-threonine phosphatase [Nostoc sp. PCC 7120]
gi|3135722|emb|CAA11911.1| protein serine-threonine phosphatase, PrpA [Anabaena sp.]
gi|17132865|dbj|BAB75430.1| protein serine-threonine phosphatase [Nostoc sp. PCC 7120]
Length = 858
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 18/159 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTI---------NKGKSGTKVQCLTSAS 72
LV+++GA G+GKSTF R +P+ I D ++ S L +
Sbjct: 10 LVVLIGASGAGKSTFA----RKHFQPFEVISSDFCRGLVSNDENSQSASRDAFDVLHYIT 65
Query: 73 SA-LKKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEG 130
+ L GK +D N++ E R +++ A+V DLP +LC R+ +R + +
Sbjct: 66 TKRLAAGKLTVIDATNVQPEDRKTLLQMAKQYHCFTVAIVFDLPEELCHERNQQRSDRQF 125
Query: 131 NLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDV 169
G +ML++ EGF + ++ ++
Sbjct: 126 ---GSHVVRRHTQMLRRSLRSLEKEGFRYVYTLKSPEEI 161
>gi|331667441|ref|ZP_08368305.1| RNase III regulator YmdB [Escherichia coli TA271]
gi|417225350|ref|ZP_12028641.1| macro domain protein [Escherichia coli 96.154]
gi|417266593|ref|ZP_12053961.1| macro domain protein [Escherichia coli 3.3884]
gi|417601459|ref|ZP_12252037.1| macro domain protein [Escherichia coli STEC_94C]
gi|419369368|ref|ZP_13910494.1| hypothetical protein ECDEC14A_1111 [Escherichia coli DEC14A]
gi|419951890|ref|ZP_14468072.1| hypothetical protein ECMT8_20968 [Escherichia coli CUMT8]
gi|422762887|ref|ZP_16816643.1| macro domain-containing protein [Escherichia coli E1167]
gi|423709054|ref|ZP_17683432.1| UPF0189 protein ymdB [Escherichia coli B799]
gi|432376154|ref|ZP_19619162.1| hypothetical protein WCQ_01033 [Escherichia coli KTE12]
gi|432834119|ref|ZP_20067661.1| hypothetical protein A1YO_01472 [Escherichia coli KTE136]
gi|432967188|ref|ZP_20156104.1| hypothetical protein A15G_02285 [Escherichia coli KTE203]
gi|324117382|gb|EGC11289.1| macro domain-containing protein [Escherichia coli E1167]
gi|331065026|gb|EGI36921.1| RNase III regulator YmdB [Escherichia coli TA271]
gi|345352062|gb|EGW84312.1| macro domain protein [Escherichia coli STEC_94C]
gi|378221043|gb|EHX81294.1| hypothetical protein ECDEC14A_1111 [Escherichia coli DEC14A]
gi|385706761|gb|EIG43799.1| UPF0189 protein ymdB [Escherichia coli B799]
gi|386200398|gb|EIH99389.1| macro domain protein [Escherichia coli 96.154]
gi|386231403|gb|EII58751.1| macro domain protein [Escherichia coli 3.3884]
gi|388413731|gb|EIL73721.1| hypothetical protein ECMT8_20968 [Escherichia coli CUMT8]
gi|430900782|gb|ELC22800.1| hypothetical protein WCQ_01033 [Escherichia coli KTE12]
gi|431387000|gb|ELG70953.1| hypothetical protein A1YO_01472 [Escherichia coli KTE136]
gi|431473160|gb|ELH52994.1| hypothetical protein A15G_02285 [Escherichia coli KTE203]
Length = 177
Score = 41.2 bits (95), Expect = 1.9, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI +AGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRSAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGALP------AKAVVHTVGP 84
>gi|383786076|ref|YP_005470645.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Fervidobacterium pennivorans DSM 9078]
gi|383108923|gb|AFG34526.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Fervidobacterium pennivorans DSM 9078]
Length = 192
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 21/116 (18%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGN 408
VGDIT+L + I NAAN L+ GGG V AI A GP ++ + E + N
Sbjct: 21 VGDITKL------DVDAIVNAANSYLQHGGG-VAGAISRAGGPEIQKESDEYVRK----N 69
Query: 409 SVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLF 464
+ P G ++IH +GP GD EI++KA+ ++F
Sbjct: 70 GPVPPGGVAVTGAGNLKAKYIIHTVGP----------IGDKEGNDEIMKKAFENIF 115
>gi|452960933|gb|EME66242.1| hydrolase [Rhodococcus ruber BKS 20-38]
Length = 169
Score = 40.8 bits (94), Expect = 2.0, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 51/113 (45%), Gaps = 20/113 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA-TAERAKSLYPGN 408
GDIT + + I NAA L GGGGV+ AI A GP + A A RA +L G
Sbjct: 9 GDITAQHV------DAIVNAAKSSLL-GGGGVDGAIHHAGGPEILAACKALRATTLPNGL 61
Query: 409 SVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYT 461
V + +T+ G+ VIH +GP +P +LR AYT
Sbjct: 62 DVGAAVATTA---GKLPARWVIHTVGPVYSPHEDR---------SHLLRSAYT 102
>gi|395203248|ref|ZP_10394482.1| hypothetical protein PA08_0188 [Propionibacterium humerusii P08]
gi|422441552|ref|ZP_16518361.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL037PA3]
gi|422472880|ref|ZP_16549361.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL037PA2]
gi|422573142|ref|ZP_16648707.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL044PA1]
gi|313835538|gb|EFS73252.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL037PA2]
gi|314928587|gb|EFS92418.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL044PA1]
gi|314970364|gb|EFT14462.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL037PA3]
gi|328908202|gb|EGG27961.1| hypothetical protein PA08_0188 [Propionibacterium humerusii P08]
Length = 171
Score = 40.8 bits (94), Expect = 2.0, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 349 VGDITRLYTG-GGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPG 407
+ DIT L T L + NAAN +L GGGGV+ AI AAGP L A + ++ P
Sbjct: 1 MADITILRTDITTLDVEAVVNAANRQLA-GGGGVDGAIHRAAGPELSAACRKLRETTLPD 59
Query: 408 NSVIVPLP---STSPLCGREGVTHVIHVLGP 435
LP S + G+ VIH +GP
Sbjct: 60 G-----LPTGQSVATTAGKMPAKWVIHTVGP 85
>gi|241661819|ref|YP_002980179.1| hypothetical protein Rpic12D_0197 [Ralstonia pickettii 12D]
gi|240863846|gb|ACS61507.1| Appr-1-p processing domain protein [Ralstonia pickettii 12D]
Length = 171
Score = 40.8 bits (94), Expect = 2.0, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 42/86 (48%), Gaps = 15/86 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT L C+ I NAAN L GGGGV+ AI AAGP L E ++L+ +
Sbjct: 13 GDITTLD------CDAIVNAANSSLL-GGGGVDGAIHRAAGPEL----LEACRALHGCRT 61
Query: 410 VIVPLPSTSPLCGREGVTHVIHVLGP 435
L L R +VIH +GP
Sbjct: 62 GEAKLTPGFQLTAR----YVIHTVGP 83
>gi|294776153|ref|ZP_06741642.1| putative RNase III regulator YmdB [Bacteroides vulgatus PC510]
gi|294449976|gb|EFG18487.1| putative RNase III regulator YmdB [Bacteroides vulgatus PC510]
Length = 208
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 304 VEEFVNKLGNARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCC 363
++ F KL N+ + + L +G + + K K IN V DIT L
Sbjct: 12 IDLFAAKLHNSLIYYIALYKG---FNTEKQKGKMKKIN-----VTVADITTLKV------ 57
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPAL 393
+ I NAAN L GGGGV+ AI AAGPAL
Sbjct: 58 DAIVNAANCSL-LGGGGVDGAIHRAAGPAL 86
>gi|198414196|ref|XP_002125071.1| PREDICTED: similar to Poly [ADP-ribose] polymerase 14 (PARP-14) (B
aggressive lymphoma protein 2), partial [Ciona
intestinalis]
Length = 1271
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT + C+ I NA+N +L+ G++ +I GP ++ AE + +
Sbjct: 528 GDITEVN------CDAIVNASNDKLELRDAGISGSIKKKCGPTVQ---AEMNQHIASVGG 578
Query: 410 VIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGC--EILRKA 459
++P + S GR +IHV+GP + + Y+K C E L++A
Sbjct: 579 TMLPGSAVSTSAGRMNCRRIIHVVGPVWKGDISDEVCEAYLKSCVSETLKEA 630
>gi|322417969|ref|YP_004197192.1| Appr-1-p processing protein [Geobacter sp. M18]
gi|320124356|gb|ADW11916.1| Appr-1-p processing domain protein [Geobacter sp. M18]
Length = 172
Score = 40.8 bits (94), Expect = 2.0, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 21/89 (23%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDITRL + I NAAN L GGGGV+ AI AAGP L +A G++
Sbjct: 10 GDITRL------AVDAIVNAANSSLL-GGGGVDGAIHRAAGPEL-LAECRTLGGCATGDA 61
Query: 410 VIV---PLPSTSPLCGREGVTHVIHVLGP 435
I LP+ HVIH +GP
Sbjct: 62 KITGGYKLPA----------RHVIHTVGP 80
>gi|319640947|ref|ZP_07995656.1| hypothetical protein HMPREF9011_01253 [Bacteroides sp. 3_1_40A]
gi|345519403|ref|ZP_08798826.1| hypothetical protein BSFG_01293 [Bacteroides sp. 4_3_47FAA]
gi|254834837|gb|EET15146.1| hypothetical protein BSFG_01293 [Bacteroides sp. 4_3_47FAA]
gi|317387466|gb|EFV68336.1| hypothetical protein HMPREF9011_01253 [Bacteroides sp. 3_1_40A]
Length = 208
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 304 VEEFVNKLGNARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCC 363
++ F KL N+ + + L +G + + K K IN V DIT L
Sbjct: 12 IDLFAAKLHNSPIYYIALYKG---FNTEKQKGKMKEIN-----VTVADITTLKV------ 57
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPAL 393
+ I NAAN L GGGGV+ AI AAGPAL
Sbjct: 58 DAIVNAANCSLL-GGGGVDGAIHRAAGPAL 86
>gi|152993044|ref|YP_001358765.1| hypothetical protein SUN_1457 [Sulfurovum sp. NBC37-1]
gi|151424905|dbj|BAF72408.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 177
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 15/89 (16%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT+ +C I NAAN L GGGGV+ AI A GPA+ A E ++ YP
Sbjct: 10 GDITKE----NVC--AIVNAANSSLM-GGGGVDGAIHRAGGPAILEACKEIRRTQYPDG- 61
Query: 410 VIVPLPSTSPLCGREG---VTHVIHVLGP 435
LP+ + G +VIH +GP
Sbjct: 62 ----LPTGEAVATTAGNLPARYVIHTVGP 86
>gi|340054013|emb|CCC48307.1| putative polynucleotide kinase 3'-phosphatase [Trypanosoma vivax
Y486]
Length = 457
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q +++ VG PG GK+TF ++ + +A + +D + +K +CL AS K GK
Sbjct: 322 QEMILFVGFPGCGKTTFFNRFLKPAG--YAHVNRDLLK-----SKEKCLAEASKWWKAGK 374
Query: 80 SVFLDRCNLEREQRTDFVKL 99
SV +D + + F+ L
Sbjct: 375 SVVIDNTSPSHDDCKPFIDL 394
>gi|334351256|sp|B7LT90.2|YMDB_ESCF3 RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
Length = 177
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 344 KFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERA 401
+ GDIT+L +VI NAAN L GGGGV+ AI AAGP L A R
Sbjct: 4 RIHVLQGDITQL------AVDVIVNAANSSLM-GGGGVDGAIHRAAGPELLEACQKVRRQ 56
Query: 402 KSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
+ P ++ + P VIH +GP
Sbjct: 57 QGECPTGHAVITIAGNLP------ARAVIHTVGP 84
>gi|299068140|emb|CBJ39357.1| conserved protein of unknown function, UPF0189 family doamin
[Ralstonia solanacearum CMR15]
Length = 171
Score = 40.8 bits (94), Expect = 2.1, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 21/81 (25%)
Query: 361 LCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLY---PGNSVIVP---L 414
L C+ I NAAN L GGGGV+ AI AAGP L E ++L+ G + I P L
Sbjct: 18 LACDAIVNAANSALL-GGGGVDGAIHRAAGPEL----LEACRALHGCRTGQAKITPGFLL 72
Query: 415 PSTSPLCGREGVTHVIHVLGP 435
P+ +VIH +GP
Sbjct: 73 PA----------RYVIHTVGP 83
>gi|317125295|ref|YP_004099407.1| Appr-1-p processing protein [Intrasporangium calvum DSM 43043]
gi|315589383|gb|ADU48680.1| Appr-1-p processing domain protein [Intrasporangium calvum DSM
43043]
Length = 185
Score = 40.8 bits (94), Expect = 2.1, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGR 423
+ I NAAN L GGGGV+ AI AAGP L +A R G++ + GR
Sbjct: 29 DAIVNAANATLL-GGGGVDGAIHRAAGPGL-LAECRRLGGCATGDAKLTG-------AGR 79
Query: 424 EGVTHVIHVLGP 435
HVIH +GP
Sbjct: 80 LPARHVIHAVGP 91
>gi|428318174|ref|YP_007116056.1| hypothetical protein Osc7112_3257 [Oscillatoria nigro-viridis PCC
7112]
gi|428241854|gb|AFZ07640.1| hypothetical protein Osc7112_3257 [Oscillatoria nigro-viridis PCC
7112]
Length = 161
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 18/144 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTI--NKGKSGTKVQCLTSASSALKKGK 79
LVI++G SGKSTF + A + +D + NK KS ++Q + +AL+ G
Sbjct: 3 LVILMGLQASGKSTFFRDYL---AATHVLVSKDLMRNNKNKSRRQIQLI---ENALQAGH 56
Query: 80 SVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAA 138
SV +D N E R + +G + + C++R+ KR G Q A
Sbjct: 57 SVAVDNTNPEVLDRRPLIDIGRTYNAQIIGYYFESIVSDCLARNQKR---SGKSQVPDIA 113
Query: 139 --AVVNRMLQKKELPKLSEGFSRI 160
A V +M+ LP EGF+++
Sbjct: 114 IYATVKKMV----LPSYGEGFAQL 133
>gi|335423634|ref|ZP_08552655.1| Appr-1-p processing domain protein [Salinisphaera shabanensis
E1L3A]
gi|335423806|ref|ZP_08552824.1| Appr-1-p processing domain protein [Salinisphaera shabanensis
E1L3A]
gi|334890557|gb|EGM28819.1| Appr-1-p processing domain protein [Salinisphaera shabanensis
E1L3A]
gi|334891459|gb|EGM29707.1| Appr-1-p processing domain protein [Salinisphaera shabanensis
E1L3A]
Length = 175
Score = 40.8 bits (94), Expect = 2.1, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 21/84 (25%)
Query: 365 VIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYP---GNSVIVP---LPSTS 418
VI NAAN +LK GGGGV+ AI AAG L E +++L P G +VI P LP+
Sbjct: 25 VIVNAANKQLK-GGGGVDGAIHRAAGSKL----VEASRALAPIEAGEAVITPAFDLPN-- 77
Query: 419 PLCGREGVTHVIHVLGPNMNPRRP 442
+V+H GP + +P
Sbjct: 78 --------DYVVHCAGPVYSKSQP 93
>gi|224286182|gb|ACN40801.1| unknown [Picea sitchensis]
Length = 204
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 55/119 (46%), Gaps = 20/119 (16%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT+ + G + I NAAN L GGGGV+ AI SAAGP L A + PG
Sbjct: 27 GDITKWFINGEN--DAIVNAAN-ELMLGGGGVDGAIHSAAGPELLRACL-NVPEIQPG-- 80
Query: 410 VIVPLPSTSPLCGRE---GVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFE 465
V P+ S V+H+IH +GP + +GD +L AY S E
Sbjct: 81 --VRCPAGSARITEAFNLPVSHIIHTVGPIYDE------EGDSAS---VLSSAYKSSLE 128
>gi|148272017|ref|YP_001221578.1| hypothetical protein CMM_0838 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147829947|emb|CAN00872.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 177
Score = 40.8 bits (94), Expect = 2.2, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 42/90 (46%), Gaps = 17/90 (18%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE-RAKSLYPGN 408
GDITR G I +AAN L GGGGV+ AI AAGP L A RA L G
Sbjct: 9 GDITRQDVDG------IVDAANSSLL-GGGGVDGAIHRAAGPELLAACRRIRADGLPDG- 60
Query: 409 SVIVPLPSTSPLCG---REGVTHVIHVLGP 435
LP+ + R HVIH +GP
Sbjct: 61 -----LPAGDAIATPGFRLPARHVIHTVGP 85
>gi|380510280|ref|ZP_09853687.1| metallophosphoesterase [Xanthomonas sacchari NCPPB 4393]
Length = 850
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTS-ASSAL 75
LV ++G GSGKSTF + + +C+ D ++ +G + L A L
Sbjct: 10 LVALIGPSGSGKSTFARTHFLPTEVISSDVCRGLVADDENDQTATGDAFEVLYFIARKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHEGN 131
G+ +D N+ E R V+L + H A+V DLP ++C R+ R +
Sbjct: 70 AAGRLTVVDATNVRPEDRKRLVELAR---EFHVLPCAIVFDLPERVCQERNSARPDR--- 123
Query: 132 LQGGKAAAVVNRMLQKKELPKLS-EGFSRITLCQNENDVQAA 172
G + +K L L EGF +++ ++ DV AA
Sbjct: 124 -NFGPHVIRNQQQALRKGLRGLEREGFRHVSVLRSVEDVAAA 164
>gi|400293635|ref|ZP_10795494.1| macro domain protein [Actinomyces naeslundii str. Howell 279]
gi|399901250|gb|EJN84146.1| macro domain protein [Actinomyces naeslundii str. Howell 279]
Length = 182
Score = 40.8 bits (94), Expect = 2.3, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 49/113 (43%), Gaps = 31/113 (27%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL-----EVATAERAKS 403
VGDIT + I NAAN L GGGGV+ AI AAGP L +V E
Sbjct: 7 VGDITTENV------DAIVNAANSTLL-GGGGVDGAIHRAAGPRLLEACQKVRATELPDG 59
Query: 404 LYPGNSVIVP---LPSTSPLCGREGVTHVIHVLGPNMNPRRPN------CLDG 447
L G +V P LP+ T VIH +GPN + + C DG
Sbjct: 60 LPVGRAVATPGFDLPA----------TWVIHTVGPNRHAGEDDPVLLRACFDG 102
>gi|422805230|ref|ZP_16853662.1| macro domain-containing protein [Escherichia fergusonii B253]
gi|424816623|ref|ZP_18241774.1| hypothetical protein ECD227_1740 [Escherichia fergusonii ECD227]
gi|324113843|gb|EGC07817.1| macro domain-containing protein [Escherichia fergusonii B253]
gi|325497643|gb|EGC95502.1| hypothetical protein ECD227_1740 [Escherichia fergusonii ECD227]
Length = 177
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 344 KFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERA 401
+ GDIT+L +VI NAAN L GGGGV+ AI AAGP L A R
Sbjct: 4 RIHVLQGDITQL------AVDVIVNAANSSLM-GGGGVDGAIHRAAGPELLEACQKVRRQ 56
Query: 402 KSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
+ P ++ + P VIH +GP
Sbjct: 57 QGECPTGHAVITIAGNLP------ARAVIHTVGP 84
>gi|225571495|ref|ZP_03780491.1| hypothetical protein CLOHYLEM_07593 [Clostridium hylemonae DSM
15053]
gi|225159572|gb|EEG72191.1| hypothetical protein CLOHYLEM_07593 [Clostridium hylemonae DSM
15053]
Length = 174
Score = 40.8 bits (94), Expect = 2.3, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDITRL + I NAAN L GGGGV+ AI AAGP L E ++L+ +
Sbjct: 9 GDITRLTD-----VDAIVNAANSSLL-GGGGVDGAIHKAAGPGL----LEECRALHGCPA 58
Query: 410 VIVPLPSTSPLCGREGVTHVIHVLGP 435
+ L GR +VIH +GP
Sbjct: 59 GEARVTGGYRLPGR----YVIHTVGP 80
>gi|321474106|gb|EFX85072.1| hypothetical protein DAPPUDRAFT_230572 [Daphnia pulex]
Length = 257
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 27/44 (61%), Gaps = 7/44 (15%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL 393
GDIT+L G I NAAN RL GGGGV+ AI AAGP L
Sbjct: 93 GDITQLEVGA------IVNAANSRL-AGGGGVDGAIHKAAGPYL 129
>gi|270013509|gb|EFA09957.1| hypothetical protein TcasGA2_TC012114 [Tribolium castaneum]
Length = 261
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 57/127 (44%), Gaps = 25/127 (19%)
Query: 343 KKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAK 402
KK F GDIT L + I NAAN L GGGGV+ AI AAGP L +A +
Sbjct: 95 KKVSIFQGDITTLEI------DAIVNAANTSLL-GGGGVDGAIHRAAGPNL-LAECKTLN 146
Query: 403 SLYPGNSVIV---PLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEIL--R 457
G++VI LP+ +VIH +GP +P L Y +I+ R
Sbjct: 147 GCPTGDAVITGGYKLPA----------KYVIHTVGP--RGEKPGLLQQCYRNCLKIMAER 194
Query: 458 KAYTSLF 464
K T F
Sbjct: 195 KLQTVAF 201
>gi|397168100|ref|ZP_10491538.1| regulator of RNase III activity [Enterobacter radicincitans DSM
16656]
gi|396089635|gb|EJI87207.1| regulator of RNase III activity [Enterobacter radicincitans DSM
16656]
Length = 180
Score = 40.8 bits (94), Expect = 2.4, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDIT L +VI NAAN L GGGGV+ AI AAGP L A ++ P
Sbjct: 10 GDITTLEV------DVIVNAANSSLL-GGGGVDGAIHRAAGPELLKACQQVRQQQGECPP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI G VIH +GP
Sbjct: 63 GHAVITT-------AGNLRAKAVIHTVGP 84
>gi|268320169|ref|YP_003293825.1| hypothetical protein FI9785_1706 [Lactobacillus johnsonii FI9785]
gi|262398544|emb|CAX67558.1| hypothetical protein predicted by Glimmer/Critica [Lactobacillus
johnsonii FI9785]
Length = 168
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
DIT+L + I NAAN R GGGGV+ AI AAGP L +A K G +
Sbjct: 9 ADITKLKV------DAIVNAAN-RTLLGGGGVDGAIHRAAGPEL-LAECRTLKGCDTGEA 60
Query: 410 VIVP---LPSTSPLCGREGVTHVIHVLGPNMNP 439
I LP+ HVIH +GP NP
Sbjct: 61 KITKGYNLPA----------KHVIHTVGPVYNP 83
>gi|75907815|ref|YP_322111.1| metallophosphoesterase [Anabaena variabilis ATCC 29413]
gi|75701540|gb|ABA21216.1| polynucleotide 2',3'-cyclic phosphate phosphodiesterase /
polynucleotide 5'-hydroxyl-kinase / polynucleotide
3'-phosphatase [Anabaena variabilis ATCC 29413]
Length = 858
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 10/155 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLTSASSA-L 75
LV+++GA G+GKSTF + + C+ D ++ S L ++ L
Sbjct: 10 LVVLIGASGAGKSTFARQHFQQFEVISSDFCRGLVSNDENSQSASRDAFDVLHYITTKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
GK +D N++ E R +++ A+V DLP +LC R+ +R + + G
Sbjct: 70 AAGKLTVIDATNVQPEDRKTLLQMAKQYHCFAVAIVFDLPEELCHERNQQRSDRQF---G 126
Query: 135 GKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDV 169
+ML++ EGF + ++ ++
Sbjct: 127 SHVVRRHTQMLRRSLRGLEKEGFRYVHTLKSPEEI 161
>gi|189240853|ref|XP_001812598.1| PREDICTED: similar to LRP16 protein [Tribolium castaneum]
Length = 234
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 57/127 (44%), Gaps = 25/127 (19%)
Query: 343 KKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAK 402
KK F GDIT L + I NAAN L GGGGV+ AI AAGP L +A +
Sbjct: 68 KKVSIFQGDITTLEI------DAIVNAANTSLL-GGGGVDGAIHRAAGPNL-LAECKTLN 119
Query: 403 SLYPGNSVIV---PLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEIL--R 457
G++VI LP+ +VIH +GP +P L Y +I+ R
Sbjct: 120 GCPTGDAVITGGYKLPA----------KYVIHTVGP--RGEKPGLLQQCYRNCLKIMAER 167
Query: 458 KAYTSLF 464
K T F
Sbjct: 168 KLQTVAF 174
>gi|42519805|ref|NP_965735.1| hypothetical protein LJ0520 [Lactobacillus johnsonii NCC 533]
gi|41584095|gb|AAS09701.1| hypothetical protein LJ_0520 [Lactobacillus johnsonii NCC 533]
Length = 168
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 44/93 (47%), Gaps = 21/93 (22%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
DIT+L +VI NAAN R GGGGV+ AI AAGP L +A K G +
Sbjct: 9 ADITKLKV------DVIVNAAN-RTLLGGGGVDGAIHRAAGPEL-LAECRTLKGCDTGEA 60
Query: 410 VIVP---LPSTSPLCGREGVTHVIHVLGPNMNP 439
I LP+ +VIH +GP NP
Sbjct: 61 KITKGYNLPA----------KYVIHTVGPVYNP 83
>gi|423314642|ref|ZP_17292575.1| hypothetical protein HMPREF1058_03187 [Bacteroides vulgatus
CL09T03C04]
gi|392681971|gb|EIY75326.1| hypothetical protein HMPREF1058_03187 [Bacteroides vulgatus
CL09T03C04]
Length = 208
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 304 VEEFVNKLGNARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCC 363
++ F KL N+ + + L +G + + K K IN V DIT L
Sbjct: 12 IDLFAAKLHNSPIYYIALYKG---FNTEKQKGKMKKIN-----VTVADITTLKV------ 57
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPAL 393
+ I NAAN L GGGGV+ AI AAGPAL
Sbjct: 58 DAIVNAANCSLL-GGGGVDGAIHRAAGPAL 86
>gi|347835375|emb|CCD49947.1| hypothetical protein [Botryotinia fuckeliana]
Length = 492
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 363 CNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCG 422
+VI NAAN +L+ GGG++ AI +AAGP L+ E + +PG + T+
Sbjct: 33 VDVIVNAANVKLE-KGGGIDGAIHAAAGPELQGEMNELFQ--HPGQ--VGGAYGTTSSWD 87
Query: 423 REGVTHVIHVLGPNMNPRRPNCLDGDYV 450
+ ++IH +GPN N P DG ++
Sbjct: 88 IQSCRYIIHAVGPNWN--IPEQQDGKFL 113
>gi|365839101|ref|ZP_09380350.1| macro domain protein [Anaeroglobus geminatus F0357]
gi|364565669|gb|EHM43386.1| macro domain protein [Anaeroglobus geminatus F0357]
Length = 280
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 17/120 (14%)
Query: 344 KFFTFVGDITRLYTGGGLCCNVIANAANWRL----KPGGGGVNAAIFSAAGPALEVATAE 399
+ + + GDITRL G I NAAN R+ P ++ I SAAG L A+
Sbjct: 94 EVYLWQGDITRLAVGA------IVNAANQRMLGCFVPLHNCIDNCIHSAAGVQLREECAK 147
Query: 400 RAKSLYPGNS----VIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEI 455
++L + V VPL + E HVIHV+GP + R P ++ C +
Sbjct: 148 GVEALLRSGTYSSPVAVPLLTKGYNLPAE---HVIHVVGPAVGGRTPTEASRKDLRACYV 204
>gi|150005775|ref|YP_001300519.1| phosphatase [Bacteroides vulgatus ATCC 8482]
gi|149934199|gb|ABR40897.1| conserved hypothetical protein, putative phosphatase [Bacteroides
vulgatus ATCC 8482]
Length = 208
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 304 VEEFVNKLGNARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCC 363
++ F KL N+ + + L +G + + K K IN V DIT L
Sbjct: 12 IDLFAAKLHNSPIYYIALYRG---FNTEKQKGKMKKIN-----VTVADITTLKV------ 57
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPAL 393
+ I NAAN L GGGGV+ AI AAGPAL
Sbjct: 58 DAIVNAANCSLL-GGGGVDGAIHRAAGPAL 86
>gi|338827088|ref|YP_004539020.1| unnamed protein product [Mycobacterium phage Faith1]
gi|333495665|gb|AEF57258.1| gp76 [Mycobacterium phage Faith1]
gi|347450366|gb|AEO94399.1| gp75 [Mycobacterium phage Rumpelstiltskin]
Length = 308
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 56/142 (39%), Gaps = 18/142 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGT------------KVQCLT 69
L M G PGSGKST + + +C+D + GT V
Sbjct: 4 LWAMRGYPGSGKSTRAREIANETGA--VVVCRDDLRMMLHGTYFSGKKELEDEVTVAERA 61
Query: 70 SASSALKKGKSVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISRSVKRIEH 128
S+ LK G SV +D +LE + K+ + V ++ PA CI KR E
Sbjct: 62 QVSAFLKAGISVVVDATHLEPSYLRKWAKMASMYGAEFKRVDIETPASYCIVNDFKRGEA 121
Query: 129 EGNLQGGKAAAVVNRMLQKKEL 150
G A V+NRM ++ +
Sbjct: 122 GDRTVG---AEVINRMAKRHPI 140
>gi|256376716|ref|YP_003100376.1| Appr-1-p processing domain-containing protein [Actinosynnema mirum
DSM 43827]
gi|255921019|gb|ACU36530.1| Appr-1-p processing domain protein [Actinosynnema mirum DSM 43827]
Length = 171
Score = 40.8 bits (94), Expect = 2.5, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 11/88 (12%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE-RAKSLYPG 407
VGD+T+ T +V+ NAAN L GGGGV+ AI A GP + A E RA L G
Sbjct: 8 VGDLTQQDT------DVVVNAANSSLL-GGGGVDGAIHRAGGPEILAACRELRAGHLGGG 60
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
+ +T+ GR V+H +GP
Sbjct: 61 LPTGQAVATTA---GRMPARWVVHTVGP 85
>gi|419012706|ref|ZP_13560067.1| hypothetical protein ECDEC1D_1551 [Escherichia coli DEC1D]
gi|377860822|gb|EHU25644.1| hypothetical protein ECDEC1D_1551 [Escherichia coli DEC1D]
Length = 177
Score = 40.4 bits (93), Expect = 2.6, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSFM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGDLP------AKAVVHTVGP 84
>gi|336054901|ref|YP_004563188.1| Appr-1-p processing domain-containing protein [Lactobacillus
kefiranofaciens ZW3]
gi|333958278|gb|AEG41086.1| Appr-1-p processing domain protein [Lactobacillus kefiranofaciens
ZW3]
Length = 167
Score = 40.4 bits (93), Expect = 2.6, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 343 KKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAK 402
KK GDIT++ + I NAAN L GGGGV+ AI +AAGP L+ E
Sbjct: 2 KKIKIIQGDITKMKA------DAIVNAANNSLL-GGGGVDGAIHAAAGPHLQ----EECM 50
Query: 403 SLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGC 453
+L+ ++ + L + HVIH +GP + + D D +K C
Sbjct: 51 ALHGCHTGEAEITQGYDLPAK----HVIHTVGPVYSGAKR---DVDLLKSC 94
>gi|253698986|ref|YP_003020175.1| Appr-1-p processing protein [Geobacter sp. M21]
gi|251773836|gb|ACT16417.1| Appr-1-p processing domain protein [Geobacter sp. M21]
Length = 177
Score = 40.4 bits (93), Expect = 2.6, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 24/115 (20%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT+L + I NAAN L GGGGV+ AI AAGP L +A G +
Sbjct: 15 GDITKL------AVDAIVNAANGTLL-GGGGVDGAIHRAAGPEL-LAECRTLSGCTAGEA 66
Query: 410 VIVP---LPSTSPLCGREGVTHVIHVLGP---NMNPRRPNCLDGDYVKGCEILRK 458
I LP+ HVIH +GP + P L Y C + R+
Sbjct: 67 KITAGYRLPA----------RHVIHTVGPVWHGGSHGEPELLRSCYRNACRLARE 111
>gi|405371633|ref|ZP_11027156.1| putative phosphatase [Chondromyces apiculatus DSM 436]
gi|397088822|gb|EJJ19783.1| putative phosphatase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 853
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMR-----SSARPWARICQDTINKGKSGTKVQCLT-SASSAL 75
LV+++G GSGKSTF + SS +C D + + + L A+ L
Sbjct: 10 LVLLIGPSGSGKSTFARRHFKPTEVLSSDAYRGIVCDDENSMEATKDAFETLRFVAAKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKR 125
+G +D N++ E R V L V AVVLD+P K C R+ +R
Sbjct: 70 ARGLLTVIDATNVQPEARKPLVALAREFHVLPVAVVLDVPEKTCHERNRQR 120
>gi|295099608|emb|CBK88697.1| Predicted phosphatase homologous to the C-terminal domain of
histone macroH2A1 [Eubacterium cylindroides T2-87]
Length = 183
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 23/110 (20%)
Query: 347 TFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYP 406
T DIT GL ++I NAAN RL P GGGV AIFS AG LE ++
Sbjct: 4 TLKADIT------GLDFDIIVNAANSRLLP-GGGVCGAIFSKAGKELE-EECQKIGHCQT 55
Query: 407 GNSVIV---PLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGC 453
G +VI LP + +IH +GP + N + +++ C
Sbjct: 56 GQAVITDAYALPCKA----------IIHTVGPIYKDGKHN--EAEFLSAC 93
>gi|17538214|ref|NP_502127.1| Protein B0035.3 [Caenorhabditis elegans]
gi|3873699|emb|CAA97408.1| Protein B0035.3 [Caenorhabditis elegans]
Length = 203
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 18/99 (18%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT+L + I NAAN RL GGGGV+ AI AAG ++ G++
Sbjct: 31 GDITKL------SVDAIVNAANSRL-AGGGGVDGAIHRAAGRKQLQEECQQYNGCAVGDA 83
Query: 410 VIVPLPSTSPLCGREGVTHVIHVLGPNM-----NPRRPN 443
VI + C + +IH +GP + + RR N
Sbjct: 84 VI------TSGCNINHIKKIIHTVGPQVYGNVTDERREN 116
>gi|343523003|ref|ZP_08759968.1| macro domain protein [Actinomyces sp. oral taxon 175 str. F0384]
gi|343400751|gb|EGV13263.1| macro domain protein [Actinomyces sp. oral taxon 175 str. F0384]
Length = 182
Score = 40.4 bits (93), Expect = 2.7, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 45/98 (45%), Gaps = 25/98 (25%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL-----EVATAERAKS 403
VGDIT + I NAAN L GGGGV+ AI AAGP L +V E
Sbjct: 7 VGDITTEKV------DAIVNAANSTLL-GGGGVDGAIHRAAGPGLLDACQKVRDTELPDG 59
Query: 404 LYPGNSVIVP---LPSTSPLCGREGVTHVIHVLGPNMN 438
L G +V P LP+ VIH +GPN++
Sbjct: 60 LPVGRAVATPGFDLPA----------AWVIHTVGPNLH 87
>gi|332665115|ref|YP_004447903.1| bis(5'-nucleosyl)-tetraphosphatase [Haliscomenobacter hydrossis DSM
1100]
gi|332333929|gb|AEE51030.1| Bis(5'-nucleosyl)-tetraphosphatase(asymmetrical) [Haliscomenobacter
hydrossis DSM 1100]
Length = 869
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 20/188 (10%)
Query: 22 LVIMVGAPGSGKSTFC-EHVMR----SSARPWARICQDTINKGKSGTKVQCL-TSASSAL 75
L++++GA SGKSTF +H + SS I D +G + + L + L
Sbjct: 24 LIVLMGASSSGKSTFARQHFLPTEIVSSDFCRGLIADDENAQGVNADAFELLHLIVAKRL 83
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
K+GK +D N++ E R + L V A+VL+LP K + R +R + + G
Sbjct: 84 KQGKLTVVDATNVQPEARKGLLALAKQYHVLAVAIVLNLPEKTLLERHEQRSDRDF---G 140
Query: 135 GKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGL--------GPLDTL- 185
R LQ+ +GF + +E ++ A + L GP D +
Sbjct: 141 SHVIRNQRRDLQRSLSFLRKDGFRYTHILASEEEIAAVQFRRTPLWSDFSTVHGPFDIIG 200
Query: 186 -PHGSFGQ 192
HG F +
Sbjct: 201 DVHGCFDE 208
>gi|220910750|ref|YP_002486060.1| Appr-1-p processing protein [Cyanothece sp. PCC 7425]
gi|219867522|gb|ACL47859.1| Appr-1-p processing domain protein [Cyanothece sp. PCC 7425]
Length = 173
Score = 40.4 bits (93), Expect = 2.7, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 53/126 (42%), Gaps = 29/126 (23%)
Query: 343 KKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAK 402
++F GDIT+L I NAAN L+P GGGV AIF+AAG E+
Sbjct: 7 ERFQIIQGDITQLQV------EAIVNAANNELRP-GGGVCGAIFAAAGYEQLKTACEQIG 59
Query: 403 SLYPGNSVIVP---LPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKA 459
G +VI LP V +IH +GP + + E+LR+
Sbjct: 60 YCPTGEAVITSGFDLP----------VDWIIHTVGPIYQGK---------TEDAELLRQC 100
Query: 460 YTSLFE 465
Y S +
Sbjct: 101 YRSCMQ 106
>gi|354584132|ref|ZP_09003028.1| metal dependent phosphohydrolase [Paenibacillus lactis 154]
gi|353196888|gb|EHB62386.1| metal dependent phosphohydrolase [Paenibacillus lactis 154]
Length = 319
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 22/157 (14%)
Query: 24 IMVGAPGSGKSTFC-EHVMRSSARPWARICQDTINKGKSGTKV----------QCLTSAS 72
++ G PGSGKS + E R A + D I + G++ +
Sbjct: 6 MLAGIPGSGKSQYAKECCKRERA---VLVATDAIREKLFGSETRQKNTYRIFDEAFAEIE 62
Query: 73 SALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNL 132
AL G++V D N+ R +R F+K +V V V + P +L R R
Sbjct: 63 QALASGRNVVFDATNVARNRRVQFLKRFN-KVPVECHVCNTPYELARERVQAR------- 114
Query: 133 QGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDV 169
+ V+ + + E P L+EGF+++ + DV
Sbjct: 115 KRKIEDKVLEKYAKNFEFPLLAEGFNQLHIVHTPADV 151
>gi|300781303|ref|ZP_07091157.1| RNase III regulator YmdB [Corynebacterium genitalium ATCC 33030]
gi|300533010|gb|EFK54071.1| RNase III regulator YmdB [Corynebacterium genitalium ATCC 33030]
Length = 168
Score = 40.4 bits (93), Expect = 2.8, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 41/95 (43%), Gaps = 15/95 (15%)
Query: 344 KFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKS 403
K GDITR + I NAAN L GGGGV+ AI A GP + A +
Sbjct: 2 KLTVIRGDITRELV------DAIVNAANSSLL-GGGGVDGAIHRAGGPEILAACKKVRAE 54
Query: 404 LYPGNSVIVPLPSTSPLCGREG---VTHVIHVLGP 435
YP LP+ + G T VIH +GP
Sbjct: 55 QYPDG-----LPTGDAVATTAGDLSATWVIHTVGP 84
>gi|46116674|ref|XP_384355.1| hypothetical protein FG04179.1 [Gibberella zeae PH-1]
Length = 220
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 50/101 (49%), Gaps = 28/101 (27%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYP--- 406
GDIT L + I NAAN L+ GG GV+ AI SAAGP L + + +L P
Sbjct: 49 GDITELR------IDAIVNAANKSLR-GGSGVDGAIHSAAGPDL----VKESGALGPIDT 97
Query: 407 GNSVIV---PLPSTSPLCGREGVTHVIHVLGPNM-NPRRPN 443
G++VI LP+ HVIH +GP + R PN
Sbjct: 98 GDAVITKGYKLPA----------KHVIHTVGPIFGSERHPN 128
>gi|404497855|ref|YP_006721961.1| O-acetyl-ADP-ribose deacetylase [Geobacter metallireducens GS-15]
gi|418067707|ref|ZP_12705042.1| Appr-1-p processing domain protein [Geobacter metallireducens RCH3]
gi|78195455|gb|ABB33222.1| O-acetyl-ADP-ribose deacetylase [Geobacter metallireducens GS-15]
gi|373558306|gb|EHP84655.1| Appr-1-p processing domain protein [Geobacter metallireducens RCH3]
Length = 173
Score = 40.4 bits (93), Expect = 2.9, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 50/119 (42%), Gaps = 29/119 (24%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT+L + I NAAN L GGGGV+ AI AAGP L +A G++
Sbjct: 10 GDITKL------AVDTIVNAANNSLL-GGGGVDGAIHRAAGPEL-LAECRTLNGCATGDA 61
Query: 410 VIVP---LPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFE 465
I LP+ HVIH +GP G E+LR Y FE
Sbjct: 62 KITKGYRLPA----------KHVIHTVGP--------VWHGGAKGEQELLRSCYRRCFE 102
>gi|332671861|ref|YP_004454869.1| Appr-1-p processing domain-containing protein [Cellulomonas fimi
ATCC 484]
gi|332340899|gb|AEE47482.1| Appr-1-p processing domain protein [Cellulomonas fimi ATCC 484]
Length = 186
Score = 40.4 bits (93), Expect = 2.9, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 19/83 (22%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYP-----GNSVIVP---LP 415
+ + NAAN L GGGGV+ AI +AAGP L A ++ P G++V+ P LP
Sbjct: 16 DAVVNAANSTLL-GGGGVDGAIHAAAGPRLLEACRRLRRTELPDGLPVGDAVVTPGFDLP 74
Query: 416 STSPLCGREGVTHVIHVLGPNMN 438
+ V+H +GPN N
Sbjct: 75 A----------RWVVHTVGPNWN 87
>gi|71425335|ref|XP_813084.1| polynucleotide kinase 3'-phosphatase [Trypanosoma cruzi strain CL
Brener]
gi|70877936|gb|EAN91233.1| polynucleotide kinase 3'-phosphatase, putative [Trypanosoma cruzi]
Length = 478
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q +VI VG PG GK+TF ++ + + I +D + K K +CL+ A GK
Sbjct: 313 QEMVIFVGYPGCGKTTFFNRFLKPAG--YVHINRDILKK-----KEKCLSEAEKWWNSGK 365
Query: 80 SVFLDRCNLEREQRTDFVKL 99
S+ +D N F+ +
Sbjct: 366 SIVVDNTNPSHSDCMPFITM 385
>gi|418530330|ref|ZP_13096256.1| hypothetical protein CTATCC11996_11593 [Comamonas testosteroni ATCC
11996]
gi|371452883|gb|EHN65909.1| hypothetical protein CTATCC11996_11593 [Comamonas testosteroni ATCC
11996]
Length = 176
Score = 40.4 bits (93), Expect = 2.9, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Query: 342 PKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL 393
P +F DIT L+ G I NAAN L GGGGV+ AI AAGP L
Sbjct: 2 PTRFHAICSDITTLHVGA------IVNAANSSLL-GGGGVDGAIHRAAGPDL 46
>gi|302537820|ref|ZP_07290162.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302446715|gb|EFL18531.1| conserved hypothetical protein [Streptomyces sp. C]
Length = 171
Score = 40.4 bits (93), Expect = 2.9, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPS---TSPL 420
+ I NAAN L GGGGV+ AI GP + A + +S Y LP+ +
Sbjct: 17 DAIVNAANSSLL-GGGGVDGAIHRRGGPEILAACEDLRRSHYGKG-----LPTGRAVATT 70
Query: 421 CGREGVTHVIHVLGP 435
GR HVIH +GP
Sbjct: 71 AGRLAADHVIHTVGP 85
>gi|71656157|ref|XP_816630.1| polynucleotide kinase 3'-phosphatase [Trypanosoma cruzi strain CL
Brener]
gi|70881771|gb|EAN94779.1| polynucleotide kinase 3'-phosphatase, putative [Trypanosoma cruzi]
Length = 478
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q +VI VG PG GK+TF ++ + + I +D + K K +CL+ A GK
Sbjct: 313 QEMVIFVGYPGCGKTTFFNRFLKPAG--YVHINRDILKK-----KEKCLSEAEKWWNSGK 365
Query: 80 SVFLDRCNLEREQRTDFVKL 99
S+ +D N F+ +
Sbjct: 366 SIVVDNTNPSHSDCMPFIAM 385
>gi|322812782|pdb|3Q6Z|A Chain A, Human Parp14 (Artd8)-Macro Domain 1 In Complex With
Adenosine-5- Diphosphoribose
Length = 214
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV---ATAERAKSLYP 406
GD+ RL +V+ NA+N LK GG+ AA+ AAGP L+ +R L P
Sbjct: 44 GDLARLPV------DVVVNASNEDLK-HYGGLAAALSKAAGPELQADCDQIVKREGRLLP 96
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRR-PNCL 445
GN+ I G+ HVIH +GP + P C+
Sbjct: 97 GNATISK-------AGKLPYHHVIHAVGPRWSGYEAPRCV 129
>gi|407852215|gb|EKG05841.1| polynucleotide kinase 3'-phosphatase, putative [Trypanosoma cruzi]
Length = 478
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q +VI VG PG GK+TF ++ + + I +D + K K +CL+ A GK
Sbjct: 313 QEMVIFVGYPGCGKTTFFNRFLKPAG--YVHINRDILKK-----KEKCLSEAEKWWNSGK 365
Query: 80 SVFLDRCNLEREQRTDFVKL 99
S+ +D N F+ +
Sbjct: 366 SIVVDNTNPSHSDCMPFITM 385
>gi|256077248|ref|XP_002574919.1| hypothetical protein [Schistosoma mansoni]
gi|353229052|emb|CCD75223.1| hypothetical protein Smp_140900.2 [Schistosoma mansoni]
Length = 224
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 35/159 (22%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT L + IANAAN +L+ GGGGV+ AI AAG L + ++ G++
Sbjct: 34 GDITHLQI------DAIANAANSQLR-GGGGVDGAIHRAAGSQL-LEACQKLSGCPTGDA 85
Query: 410 VIVP---LPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRK------AY 460
+ P LPS +VIH +GP R L+ Y K E+ + A+
Sbjct: 86 KLTPGFNLPS----------KYVIHCVGP--VGRNDVALESTYRKALELCSEHNIQSIAF 133
Query: 461 TSLFEGFLSIVRSQEK-----LSKGCNEDIRLEPSVSQD 494
+ G + +++E L KG ++ I +P D
Sbjct: 134 PCISTGVYEVQKTRENKKRIDLIKGLDDQI-FKPDFPDD 171
>gi|408679469|ref|YP_006879296.1| Macro domain, possibly ADP-ribose binding module [Streptomyces
venezuelae ATCC 10712]
gi|328883798|emb|CCA57037.1| Macro domain, possibly ADP-ribose binding module [Streptomyces
venezuelae ATCC 10712]
Length = 174
Score = 40.4 bits (93), Expect = 3.1, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 40/89 (44%), Gaps = 15/89 (16%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT + I NAAN L GGGGV+ AI GP + A + +S Y
Sbjct: 9 GDIT------AEAVDAIVNAANSSLL-GGGGVDGAIHRKGGPEILAACQDLRRSHYGKG- 60
Query: 410 VIVPLPS---TSPLCGREGVTHVIHVLGP 435
LP+ + GR HVIH +GP
Sbjct: 61 ----LPTGRAVATTAGRLAARHVIHTVGP 85
>gi|298529320|ref|ZP_07016723.1| Appr-1-p processing domain protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298510756|gb|EFI34659.1| Appr-1-p processing domain protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 178
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 52/120 (43%), Gaps = 30/120 (25%)
Query: 326 KILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAI 385
K++S VR + Q I ++ DIT + NAAN +L+P GGGV A+
Sbjct: 3 KVISRVRVECVQGDIASQE------DIT-----------AVVNAANSQLRP-GGGVAGAL 44
Query: 386 FSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGREGV--THVIHVLGPNMNPRRPN 443
AGP LE E + L P P + L G + +VIH LGP RP
Sbjct: 45 HQKAGPGLE----EECRPLAPIR------PGEAVLTGGHNLPNRYVIHCLGPVYGVDRPE 94
>gi|405124062|gb|AFR98824.1| LRP16 family protein [Cryptococcus neoformans var. grubii H99]
Length = 216
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 59/132 (44%), Gaps = 23/132 (17%)
Query: 335 AAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALE 394
A +K +N + + GDIT+L N+I NAAN L GGGGV+ AI SAAG L
Sbjct: 32 AFRKQLN-DRISIWRGDITKLE------ANMIVNAANSSLL-GGGGVDGAIHSAAGKQL- 82
Query: 395 VATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCE 454
E KSL ++ L ++ V H +GP P + +
Sbjct: 83 ---LEECKSLGGAHTGETKFTDGYNLPSKK----VAHTVGPVYRSYPPQ-------RAAQ 128
Query: 455 ILRKAYTSLFEG 466
+L+ YT+ EG
Sbjct: 129 LLKSCYTTSLEG 140
>gi|401404886|ref|XP_003881893.1| hypothetical protein NCLIV_016520 [Neospora caninum Liverpool]
gi|325116307|emb|CBZ51860.1| hypothetical protein NCLIV_016520 [Neospora caninum Liverpool]
Length = 779
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 50/117 (42%), Gaps = 17/117 (14%)
Query: 343 KKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAK 402
+K + GDIT L +VI NAAN L GGGGV+ AI AGP L +
Sbjct: 31 RKVVLYRGDITELNV------DVIVNAANPSLL-GGGGVDGAIHRKAGPELRAFN----Q 79
Query: 403 SLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKA 459
+L + V LC + H +GP +P L Y E+L+K+
Sbjct: 80 TLGGCKTSEVKASPAFQLC----CKQIFHTVGPRGE--QPQALRACYQNALELLKKS 130
>gi|323140531|ref|ZP_08075458.1| macro domain protein [Phascolarctobacterium succinatutens YIT
12067]
gi|322414983|gb|EFY05775.1| macro domain protein [Phascolarctobacterium succinatutens YIT
12067]
Length = 323
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 57/127 (44%), Gaps = 21/127 (16%)
Query: 336 AQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV 395
AQK+ + GDIT L C+ I NAAN L GGGGV+ AI AAGP L
Sbjct: 143 AQKNKAQNAISVWRGDITTL------DCDAIVNAANSTLL-GGGGVDGAIHRAAGPQL-- 193
Query: 396 ATAERAKSL--YPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLD-GD-YVK 451
E K+L P + + P +++IH +GP N + L+ D Y
Sbjct: 194 --LEECKTLGGCPTGAAKITYGYNLP------ASYIIHTVGPIYNGKVEQRLELADCYKN 245
Query: 452 GCEILRK 458
E+ RK
Sbjct: 246 SLELARK 252
>gi|417288525|ref|ZP_12075810.1| macro domain protein [Escherichia coli TW07793]
gi|386247317|gb|EII93490.1| macro domain protein [Escherichia coli TW07793]
Length = 177
Score = 40.4 bits (93), Expect = 3.3, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRVAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGDLP------AKAVVHTVGP 84
>gi|154413911|ref|XP_001579984.1| Appr-1-p processing enzyme family protein [Trichomonas vaginalis
G3]
gi|121914197|gb|EAY18998.1| Appr-1-p processing enzyme family protein [Trichomonas vaginalis
G3]
Length = 268
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 334 KAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL 393
K A IN K F GD +L C+ I NAAN +LK G G+ IF AAG L
Sbjct: 36 KKANNEINKKISVWFKGDSCKLQ------CDAIVNAANSKLK-AGSGICGMIFKAAGNEL 88
Query: 394 EVATAERAKSLYPGNSVIVP---LPSTSPLCGREGVTHVIHVLGP 435
V ++A G++ + P LPS ++IH +GP
Sbjct: 89 -VDACKKAGYTETGHAALTPAFKLPS----------KYIIHAVGP 122
>gi|386284303|ref|ZP_10061525.1| hypothetical protein SULAR_03612 [Sulfurovum sp. AR]
gi|385344588|gb|EIF51302.1| hypothetical protein SULAR_03612 [Sulfurovum sp. AR]
Length = 175
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 366 IANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGREG 425
I NAAN L GGGGV+ AI A GP + A + + YP LP+ + G
Sbjct: 19 IVNAANSSLM-GGGGVDGAIHRAGGPKILEACEQVRQESYPEG-----LPTGESVATNAG 72
Query: 426 ---VTHVIHVLGPNMNPRRPNCLD 446
+VIH +GP + +CLD
Sbjct: 73 NLPSNYVIHTVGPIYHQCGEDCLD 96
>gi|71023901|ref|XP_762180.1| hypothetical protein UM06033.1 [Ustilago maydis 521]
gi|46101638|gb|EAK86871.1| hypothetical protein UM06033.1 [Ustilago maydis 521]
Length = 220
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 52/121 (42%), Gaps = 28/121 (23%)
Query: 348 FVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL--EVATAERAKSLY 405
F GDIT L + I NAAN L GGGGV+ AI AAG L E ++
Sbjct: 41 FTGDITTL------SIDAIVNAANNSLL-GGGGVDGAIHRAAGRELVVECGKLNGCETGS 93
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCE-ILRKAYTSLF 464
++ LPS HVIH +GP N R + CE +LR AY S
Sbjct: 94 AKTTLGYALPS----------KHVIHTVGPVYNSSRH--------EECERLLRSAYRSSL 135
Query: 465 E 465
E
Sbjct: 136 E 136
>gi|436838404|ref|YP_007323620.1| Appr-1-p processing domain protein [Fibrella aestuarina BUZ 2]
gi|384069817|emb|CCH03027.1| Appr-1-p processing domain protein [Fibrella aestuarina BUZ 2]
Length = 175
Score = 40.0 bits (92), Expect = 3.4, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 49/112 (43%), Gaps = 24/112 (21%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT+L + I NAAN L GGGGV+ AI AAGP L V GN+
Sbjct: 15 GDITKL------AVDAIVNAANSSLL-GGGGVDGAIHRAAGPEL-VQECRLLGGCKTGNA 66
Query: 410 VIVP---LPSTSPLCGREGVTHVIHVLGPNMNP---RRPNCLDGDYVKGCEI 455
+ LP+ +VIH +GP N P L YV+ E+
Sbjct: 67 KLTKGYRLPA----------RYVIHTVGPVWNGGQLNEPALLASCYVRSLEV 108
>gi|406831063|ref|ZP_11090657.1| metallophosphoesterase [Schlesneria paludicola DSM 18645]
Length = 867
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTIN-----KGKSGTKVQCLT-SASSAL 75
LV+++G G+GKSTF S + C+ ++ + + + L A+ L
Sbjct: 10 LVVLIGPSGTGKSTFARRHFLPSEILSSDYCRGLVSDDENCQAATNDAFEILHFVATKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKR 125
+G+ +D N++RE R V L H A+VL+LP +C R+ R
Sbjct: 70 SRGRLTVIDATNVQRESRAPLVTLAR---KFHCLPVAIVLNLPESVCHERNQSR 120
>gi|221486067|gb|EEE24337.1| MACRO domain-containing protein [Toxoplasma gondii GT1]
Length = 817
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 17/117 (14%)
Query: 343 KKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAK 402
+K + GDIT L +VI NAAN L GGGGV+ AI AGP L V
Sbjct: 47 RKVVLYRGDITELDV------DVIVNAANPSLL-GGGGVDGAIHRKAGPQLRVFNQTLGG 99
Query: 403 SLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKA 459
+ P+ +C + H +GP +P L Y+ E+L+++
Sbjct: 100 CK---TGEVKASPAFQLVC-----KQIFHTVGPRGE--QPQALRACYLNALELLKRS 146
>gi|359773837|ref|ZP_09277220.1| serine/threonine protein phosphatase PrpA [Gordonia effusa NBRC
100432]
gi|359308925|dbj|GAB19998.1| serine/threonine protein phosphatase PrpA [Gordonia effusa NBRC
100432]
Length = 834
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 12/159 (7%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTI-----NKGKSGTKVQCLTSASSA-L 75
L+++VG GSGKSTF + + + C+ I ++ + L L
Sbjct: 13 LIVLVGVSGSGKSTFAQRHFAPTETISSDFCRGLIADDENDQNATPDAFDVLNYIVGVRL 72
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
++G +D +++ R +KL +V V A+VLD+P + + R+ R G+
Sbjct: 73 RRGLLTVVDATSVQPAARKALIKLAKDNDVLVDAIVLDVPESIAVQRNRAR----GDRTF 128
Query: 135 GKAAAVVNRMLQKKELPKL-SEGFSRITLCQNENDVQAA 172
G R KK + + EGF R+ + + + +A
Sbjct: 129 GDHVIGRQRGQLKKSMRGMRKEGFRRVHVLDGVDQIDSA 167
>gi|338529765|ref|YP_004663099.1| hypothetical protein LILAB_00445 [Myxococcus fulvus HW-1]
gi|337255861|gb|AEI62021.1| hypothetical protein LILAB_00445 [Myxococcus fulvus HW-1]
Length = 174
Score = 40.0 bits (92), Expect = 3.6, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 42/90 (46%), Gaps = 23/90 (25%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL--EVATAERAKSLYPG 407
GDIT++ + I NAAN L GGGGV+ AI AAGP L E T R
Sbjct: 11 GDITQVQA------DAIVNAANSAL-CGGGGVDGAIHRAAGPGLLAECRTLGRCP----- 58
Query: 408 NSVIVPLPSTSPLCGREGVT--HVIHVLGP 435
P + + G G+ HVIH +GP
Sbjct: 59 -------PGEARITGGHGLPARHVIHAVGP 81
>gi|407278056|ref|ZP_11106526.1| appr-1-p processing enzyme [Rhodococcus sp. P14]
Length = 169
Score = 40.0 bits (92), Expect = 3.6, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPA-LEVATAERAKSLYPGNSVIVPLPSTSPLCG 422
+ I NAA L GGGGV+ AI A GP L A RA +L G V + +T+ G
Sbjct: 17 DAIVNAAKSSLL-GGGGVDGAIHHAGGPEILAACKALRATTLPNGLDVGAAVATTA---G 72
Query: 423 REGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYT 461
+ VIH +GP +P +LR AYT
Sbjct: 73 KLPARWVIHTVGPLYSPHEDR---------SHLLRSAYT 102
>gi|114051600|ref|NP_001040417.1| LRP16 protein [Bombyx mori]
gi|95102810|gb|ABF51346.1| LRP16 protein [Bombyx mori]
Length = 275
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%), Gaps = 7/47 (14%)
Query: 348 FVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALE 394
F GDIT+L + + NAAN RLK GGGV+ AI AAGP L+
Sbjct: 114 FKGDITKLEI------DAVVNAANSRLK-AGGGVDGAIHRAAGPFLQ 153
>gi|306819423|ref|ZP_07453130.1| RNase III regulator YmdB [Mobiluncus mulieris ATCC 35239]
gi|304647715|gb|EFM45033.1| RNase III regulator YmdB [Mobiluncus mulieris ATCC 35239]
Length = 249
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 49/104 (47%), Gaps = 13/104 (12%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDITR++ + I NAAN L GGGGV+ AI AAGP L A + YP
Sbjct: 8 GDITRVH------VDAIVNAANSTLL-GGGGVDGAIHRAAGPELLAACRVIRATRYPDG- 59
Query: 410 VIVPLPSTSPLCG-REGVTHVIHVLGPNMNPRR--PNCLDGDYV 450
+P+ G + VIH +GPN + + P L +V
Sbjct: 60 --LPVGQAVATKGFKLPAKWVIHTVGPNRHAGQTDPGLLRAAFV 101
>gi|392407459|ref|YP_006444067.1| phosphatase, C-terminal domain of histone macro H2A1 like protein
[Anaerobaculum mobile DSM 13181]
gi|390620595|gb|AFM21742.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Anaerobaculum mobile DSM 13181]
Length = 176
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 39/80 (48%), Gaps = 15/80 (18%)
Query: 366 IANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVP---LPSTSPLCG 422
+ NAAN LKPGGG V AI AAGP LE A + PG +VI LP+
Sbjct: 27 VVNAANAWLKPGGG-VAGAIHRAAGPGLEEECRPLA-PIKPGQAVITGGHNLPN------ 78
Query: 423 REGVTHVIHVLGPNMNPRRP 442
+VIH LGP +P
Sbjct: 79 ----RYVIHCLGPRWGIDKP 94
>gi|212693219|ref|ZP_03301347.1| hypothetical protein BACDOR_02729 [Bacteroides dorei DSM 17855]
gi|345515425|ref|ZP_08794927.1| hypothetical protein BSEG_02278 [Bacteroides dorei 5_1_36/D4]
gi|423231457|ref|ZP_17217860.1| hypothetical protein HMPREF1063_03680 [Bacteroides dorei
CL02T00C15]
gi|423246044|ref|ZP_17227117.1| hypothetical protein HMPREF1064_03323 [Bacteroides dorei
CL02T12C06]
gi|212664324|gb|EEB24896.1| macro domain protein [Bacteroides dorei DSM 17855]
gi|345455736|gb|EEO46137.2| hypothetical protein BSEG_02278 [Bacteroides dorei 5_1_36/D4]
gi|392627087|gb|EIY21126.1| hypothetical protein HMPREF1063_03680 [Bacteroides dorei
CL02T00C15]
gi|392637029|gb|EIY30905.1| hypothetical protein HMPREF1064_03323 [Bacteroides dorei
CL02T12C06]
Length = 208
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 304 VEEFVNKLGNARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCC 363
++ F KL N+ + + L +G + + K K IN V DIT L
Sbjct: 12 IDLFAAKLHNSPIYYIALYRG---FNTEKQKGKMKKIN-----VTVADITTLKV------ 57
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPAL 393
+ I NAAN L GGGGV+ AI AAGPAL
Sbjct: 58 DAIVNAANSSLL-GGGGVDGAIHRAAGPAL 86
>gi|119490201|ref|ZP_01622714.1| hypothetical protein L8106_15924 [Lyngbya sp. PCC 8106]
gi|119454087|gb|EAW35240.1| hypothetical protein L8106_15924 [Lyngbya sp. PCC 8106]
Length = 154
Score = 40.0 bits (92), Expect = 3.8, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKV----------QCLTSA 71
L++M+G PGSGKS F ++ + + I DTI G + Q
Sbjct: 4 LILMIGLPGSGKSFFATQ-LQVNHPDYQLISTDTIRAQLFGDEAIQGPWLRVWSQVQHQF 62
Query: 72 SSALKKGKSVFLDRCNLEREQRTDFVKLGGPEVD---VHAVVLDLPAKLCISRSVKRIEH 128
A+ +G D N +R QR D + + E+ + AV ++ P + C+ R+ R+
Sbjct: 63 KQAVGEGTDAIYDATNTQRRQRKDVITV-AREIGFDPIFAVWVNTPLEQCLQRNQNRLRQ 121
>gi|149920935|ref|ZP_01909396.1| hypothetical protein PPSIR1_13955 [Plesiocystis pacifica SIR-1]
gi|149818207|gb|EDM77662.1| hypothetical protein PPSIR1_13955 [Plesiocystis pacifica SIR-1]
Length = 580
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 49/124 (39%), Gaps = 22/124 (17%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSG------------------- 62
L+++ G PG+GKS + + W R DT+ K +G
Sbjct: 401 LLLVGGLPGTGKSVLAQGLSERGGFQWIRT--DTVRKSLAGLAPSERGSAELYSKIWTER 458
Query: 63 TKVQCLTSASSALKKGKSVFLDRCNLEREQRTDFVKLGGPE-VDVHAVVLDLPAKLCISR 121
T CL A + G +D + +R+ FV V VH +VLDLP ++ +R
Sbjct: 459 TYAACLAEAEATCTAGGRAIVDATFVSGARRSQFVDAAARWGVAVHFLVLDLPPEIARAR 518
Query: 122 SVKR 125
R
Sbjct: 519 IEAR 522
>gi|440800946|gb|ELR21972.1| hypothetical protein ACA1_325440 [Acanthamoeba castellanii str.
Neff]
Length = 552
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 7/141 (4%)
Query: 42 RSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG--KSVFLDRCNLEREQRTDFVKL 99
R + R W R +D KG K LT+ S ++G K V +D L R ++
Sbjct: 414 RLAKRGWLRFSEDDY-KGHVECKAHMLTTLSEMSEEGRPKDVVVDASVLNPVHRKGWIST 472
Query: 100 --GGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVVNRMLQKKEL-PKLSEG 156
+V+A+ LD+ A +C R+ + E + +G + ++ Q E PK EG
Sbjct: 473 LHAAGYWNVYALHLDISADVCKRRAAS-LHGEESDEGRSMQEAIGKLAQSAEAQPKAREG 531
Query: 157 FSRITLCQNENDVQAALDTYS 177
RI + +++ L + S
Sbjct: 532 LQRIAAVHTDAEIEEFLASLS 552
>gi|346466593|gb|AEO33141.1| hypothetical protein [Amblyomma maculatum]
Length = 276
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 31/55 (56%), Gaps = 7/55 (12%)
Query: 344 KFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA 398
K FVGDIT L + I NAAN L GGGGV+ AI SAAGP L+ A
Sbjct: 107 KISVFVGDITALEI------DAIVNAANNSLL-GGGGVDGAIHSAAGPKLKAECA 154
>gi|116196750|ref|XP_001224187.1| hypothetical protein CHGG_04973 [Chaetomium globosum CBS 148.51]
gi|88180886|gb|EAQ88354.1| hypothetical protein CHGG_04973 [Chaetomium globosum CBS 148.51]
Length = 282
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 52/124 (41%), Gaps = 39/124 (31%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL----------EVATAE 399
GDIT+L + I NAAN L GGGGV+ AI AAGP L E +A+
Sbjct: 59 GDITKL------AVDAIVNAANRSLL-GGGGVDEAIHRAAGPQLYLECRGLGGCETGSAK 111
Query: 400 RAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRP----NCLDGDYVKGCEI 455
+ LP C R VIH +GP NP P L G Y + E+
Sbjct: 112 MTAAYA--------LP-----CQR-----VIHAVGPVYNPFNPEGSERLLTGCYTRSLEL 153
Query: 456 LRKA 459
+A
Sbjct: 154 AVEA 157
>gi|302788298|ref|XP_002975918.1| hypothetical protein SELMODRAFT_150946 [Selaginella moellendorffii]
gi|300156194|gb|EFJ22823.1| hypothetical protein SELMODRAFT_150946 [Selaginella moellendorffii]
Length = 224
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 52/124 (41%), Gaps = 28/124 (22%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL-----EVATAERAKSL 404
GDIT G + I NAAN R+ GGGGV+ AI AAGP L E+ E
Sbjct: 48 GDITIWRKDGH--SDAIVNAANERML-GGGGVDGAIHDAAGPELRDACRELPLVEPGVRC 104
Query: 405 YPGNSVIVP---LPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYT 461
G++V P LP V +IH +GP VK +LR AY
Sbjct: 105 PVGHAVETPGFLLP----------VARIIHTVGPMY-------FKSSRVKAAALLRDAYR 147
Query: 462 SLFE 465
+ E
Sbjct: 148 NSLE 151
>gi|403412086|emb|CCL98786.1| predicted protein [Fibroporia radiculosa]
Length = 235
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 348 FVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL--EVATAERAKSLY 405
F GDIT L G I NAAN L GGGGV+ AI +AAGP L E T + +
Sbjct: 43 FQGDITELEVDG------IVNAANRSLL-GGGGVDGAIHAAAGPELLEECRTLDGCDTGD 95
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
+ LPS H+IH +GP
Sbjct: 96 AKMTKAYNLPS----------QHIIHAVGP 115
>gi|170099063|ref|XP_001880750.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644275|gb|EDR08525.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 230
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 62/137 (45%), Gaps = 30/137 (21%)
Query: 307 FVNKLGNARLVLVDLTQGSKILSLVRAKAAQKHINPK-----KFFTFVGDITRLYTGGGL 361
FV +LG + + L Q SK+L A A H P + + G+ITRL GL
Sbjct: 19 FVIRLGKIQ-TIGQLYQ-SKVLQ--AAAADDVHYKPNSTLLGRVCLYQGNITRL----GL 70
Query: 362 CCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIV---PLPSTS 418
+ I NAAN L GGGGV+ AI +AAGP L V G S I LP+
Sbjct: 71 --DSIVNAANKSLL-GGGGVDGAIHTAAGPKL-VDECRGLNGCLTGQSKITRGYDLPA-- 124
Query: 419 PLCGREGVTHVIHVLGP 435
HVIH +GP
Sbjct: 125 --------AHVIHTVGP 133
>gi|433459427|ref|ZP_20417234.1| hypothetical protein D477_20294 [Arthrobacter crystallopoietes
BAB-32]
gi|432190661|gb|ELK47676.1| hypothetical protein D477_20294 [Arthrobacter crystallopoietes
BAB-32]
Length = 172
Score = 39.7 bits (91), Expect = 4.5, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Query: 351 DITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSV 410
DITR + I NAAN L GGGGV+ AI AAGPAL A E + Y
Sbjct: 9 DITRRRV------DAIVNAANSSLL-GGGGVDGAIHRAAGPALLAACRELRRDEYQDGLP 61
Query: 411 IVPLPSTSP--LCGREGVTHVIHVLGPN 436
+ T L R VIH +GPN
Sbjct: 62 VGAAVQTGAFDLSAR----WVIHTVGPN 85
>gi|357621137|gb|EHJ73076.1| LRP16 protein [Danaus plexippus]
Length = 252
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 75/175 (42%), Gaps = 33/175 (18%)
Query: 295 KASDVI-IEKVEEFV------NKLGNARLVLVDLTQGSKILSLVRAKAAQKHIN-PKKFF 346
K+ D I I+KV+ ++ L + + + DL + KI ++++IN K
Sbjct: 27 KSGDYITIDKVDPWIFYVQDNQSLQDKKHTVEDLNEFRKI-----KLNSERNININHKVS 81
Query: 347 TFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYP 406
F GDIT+L + I NAAN RL GGGV+ AI AAGP L+
Sbjct: 82 IFKGDITKLEV------DAIVNAANSRL-IAGGGVDGAIHRAAGPMLQAECNTLGGC--- 131
Query: 407 GNSVIVPLPSTSPLCGRE-GVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAY 460
P CG +VIH +GP N PN L Y + C L K Y
Sbjct: 132 ------PTGEARITCGYNLPANYVIHTVGPQ-NGSAPN-LKSCY-ENCFALVKQY 177
>gi|297562943|ref|YP_003681917.1| metallophosphoesterase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847391|gb|ADH69411.1| metallophosphoesterase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 864
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCL-TSASSAL 75
LV++VG GSGKSTF + + C+ D ++ + L T L
Sbjct: 22 LVVLVGVSGSGKSTFAARHFAPTQVISSDYCRGLVSDDENDQAATADAFSLLHTVVDIRL 81
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
++G +D N++ R + V++ V A+VLD+P L R+ R + + G
Sbjct: 82 RRGLLAVVDATNVQSRARRELVRIAKDNNVLSTAIVLDVPEALARERNRDRPDRD---FG 138
Query: 135 GKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAAL 173
R L++ EGF ++ + Q ++ AA+
Sbjct: 139 DHVIRRQRRDLRQSLRHLRREGFRKVHVLQGPEEIDAAV 177
>gi|344997726|ref|YP_004800580.1| Appr-1-p processing domain-containing protein [Streptomyces sp.
SirexAA-E]
gi|344313352|gb|AEN08040.1| Appr-1-p processing domain protein [Streptomyces sp. SirexAA-E]
Length = 175
Score = 39.7 bits (91), Expect = 4.6, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 44/92 (47%), Gaps = 19/92 (20%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGP-ALEVATAERA----KS 403
+GDIT ++ +V+ NAAN L GGGGV+ AI GP L A RA K
Sbjct: 12 LGDITEQHS------DVLVNAANSSLL-GGGGVDGAIHRRGGPDILAACRALRASHYGKG 64
Query: 404 LYPGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
L G +V + GR HV+H +GP
Sbjct: 65 LPTGQAV-------ATTAGRLHARHVVHTVGP 89
>gi|307701665|ref|ZP_07638681.1| macro domain protein [Mobiluncus mulieris FB024-16]
gi|307613168|gb|EFN92421.1| macro domain protein [Mobiluncus mulieris FB024-16]
Length = 258
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDITR++ + I NAAN L GGGGV+ AI AAGP L A + YP
Sbjct: 8 GDITRVH------VDAIVNAANSTLL-GGGGVDGAIHRAAGPELLAACRVIRATRYPDGL 60
Query: 410 VIVPLPSTSPLCGREGVTHVIHVLGPNMNPRR--PNCLDGDYV 450
+ +T + VIH +GPN + + P L +V
Sbjct: 61 PVGQAVATKGF--KLPAKWVIHTVGPNRHAGQTDPGLLRAAFV 101
>gi|430741241|ref|YP_007200370.1| polynucleotide kinase-phosphatase [Singulisphaera acidiphila DSM
18658]
gi|430012961|gb|AGA24675.1| polynucleotide kinase-phosphatase [Singulisphaera acidiphila DSM
18658]
Length = 869
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 67/161 (41%), Gaps = 16/161 (9%)
Query: 22 LVIMVGAPGSGKSTFC-EHVM----RSSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LVI++G GSGKSTF +H + SS I D ++G + + L A L
Sbjct: 10 LVILIGPSGSGKSTFARKHFLPTEILSSDACRGMISDDENDQGVTTEAFEVLRFIAGKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHEGN 131
GK +D N++ E R V L H A+VL LP K+C R+ R + +
Sbjct: 70 ALGKLTVIDATNVQAEARKPLVALAR---QYHCLPVALVLALPEKVCHERNQARPDRDF- 125
Query: 132 LQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAA 172
G LQ+ EGF + + + V AA
Sbjct: 126 --GPHVVRNQTTQLQRSLRSLRKEGFRYVFVMETPAMVDAA 164
>gi|213514150|ref|NP_001133595.1| MACRO domain-containing protein 1 [Salmo salar]
gi|209154620|gb|ACI33542.1| MACRO domain-containing protein 1 [Salmo salar]
Length = 385
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 44/96 (45%), Gaps = 21/96 (21%)
Query: 343 KKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAK 402
KK F GDIT+L G I NAAN L GGGGV+ AI AGP L AE +
Sbjct: 211 KKISLFSGDITKLEIDG------IVNAANKTL-LGGGGVDGAIHRTAGPLLRSECAE-LR 262
Query: 403 SLYPGNSVIV---PLPSTSPLCGREGVTHVIHVLGP 435
G + I LP+ +VIH +GP
Sbjct: 263 GCETGEAKITGGYGLPA----------KYVIHTVGP 288
>gi|422013969|ref|ZP_16360585.1| Appr-1-p processing protein [Providencia burhodogranariea DSM
19968]
gi|414101991|gb|EKT63587.1| Appr-1-p processing protein [Providencia burhodogranariea DSM
19968]
Length = 182
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 25/116 (21%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPA-LEVATAERAKS--LYP 406
GDIT++ + I NAAN L GGGGV+ AI + G A L+ RA+ +P
Sbjct: 19 GDITKVEV------DAIVNAANSSLL-GGGGVDGAIHRSGGAAILDECRQIRARQGGCHP 71
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTS 462
G++VI G+ +VIH +GP DG + + EIL+KAY S
Sbjct: 72 GDAVITT-------GGKLPAKYVIHTVGPVWQ-------DGAHNE-TEILKKAYLS 112
>gi|432877654|ref|XP_004073204.1| PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD1-like [Oryzias
latipes]
Length = 358
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 331 VRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAG 390
VRA+ + +K + GDIT+L + I NAAN L GGGGV+ AI AAG
Sbjct: 166 VRARYQKNEKLDRKISLYCGDITKLEV------DAIVNAANKTLL-GGGGVDGAIHRAAG 218
Query: 391 PALE 394
P L+
Sbjct: 219 PMLK 222
>gi|21244068|ref|NP_643650.1| hypothetical protein XAC3343 [Xanthomonas axonopodis pv. citri str.
306]
gi|21109691|gb|AAM38186.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 195
Score = 39.7 bits (91), Expect = 5.0, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 50/118 (42%), Gaps = 11/118 (9%)
Query: 327 ILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIF 386
+L + R + + + GDIT L +VI NAAN L GGGGV+ AI
Sbjct: 1 MLPITRPSCNSHNYRAMRIEVWQGDITELDV------DVIVNAANESLL-GGGGVDGAIH 53
Query: 387 SAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGRE-GVTHVIHVLGPNMNPRRPN 443
AAGP L + E + PG V P G + H+ H +GP R N
Sbjct: 54 RAAGPRL-LEACEALPQVRPG--VRCPTGEIRITDGFDLKARHIFHTVGPVWRDGRHN 108
>gi|383452117|ref|YP_005366106.1| metallophosphoesterase [Corallococcus coralloides DSM 2259]
gi|380733997|gb|AFE09999.1| metallophosphoesterase [Corallococcus coralloides DSM 2259]
Length = 409
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 12/108 (11%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
+Q LV+++G GSGKST A + + G +G + + + L KG
Sbjct: 7 EQSLVLLLGPSGSGKSTLAN----------AHFLPEDVLPG-TGNETKLHDEVARRLTKG 55
Query: 79 KSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKR 125
+D L E R +V L V + AV +D P LC+ R+ R
Sbjct: 56 TLTVIDGVPLSAESRRHYVTLAREHHVALVAVAMDTPEALCLERNRTR 103
>gi|300918643|ref|ZP_07135225.1| RNase III regulator YmdB [Escherichia coli MS 115-1]
gi|432533270|ref|ZP_19770260.1| hypothetical protein A193_01716 [Escherichia coli KTE234]
gi|300414186|gb|EFJ97496.1| RNase III regulator YmdB [Escherichia coli MS 115-1]
gi|431062390|gb|ELD71658.1| hypothetical protein A193_01716 [Escherichia coli KTE234]
Length = 177
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI L G V+H +GP
Sbjct: 63 GHAVIT-------LAGDLPAKAVVHTVGP 84
>gi|302770290|ref|XP_002968564.1| hypothetical protein SELMODRAFT_89486 [Selaginella moellendorffii]
gi|300164208|gb|EFJ30818.1| hypothetical protein SELMODRAFT_89486 [Selaginella moellendorffii]
Length = 202
Score = 39.7 bits (91), Expect = 5.0, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 51/117 (43%), Gaps = 14/117 (11%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT G + I NAAN R+ GGGGV+ AI AAG L A E + PG
Sbjct: 47 GDITIWCKDGH--SDAIVNAANERML-GGGGVDGAIHDAAGQELREACRE-LPLVEPG-- 100
Query: 410 VIVPLPSTSPLCGRE-GVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFE 465
V P+ G E V +IH +GP VK +LR AY + E
Sbjct: 101 VRCPVGHAVETPGFELPVARIIHTVGPMY-------FKSSRVKAAALLRDAYHNSLE 150
>gi|381210682|ref|ZP_09917753.1| hypothetical protein LGrbi_12208 [Lentibacillus sp. Grbi]
Length = 183
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 48/113 (42%), Gaps = 26/113 (23%)
Query: 340 INPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGP-ALEVATA 398
IN GDIT+ T + I NAAN L GGGGV+ AI AAG LE
Sbjct: 5 INRNTLELMTGDITKQKT------DAIVNAANGTLM-GGGGVDGAIHRAAGKDLLEECKQ 57
Query: 399 ERAKS-----LYPGNSVIVP---LPSTSPLCGREGVTHVIHVLGPNMNPRRPN 443
R + L GN+VI LP+ HVIH +GP N N
Sbjct: 58 VRQEQLNGDKLQTGNAVITAGYNLPT----------KHVIHTVGPVWNKGNQN 100
>gi|197116755|ref|YP_002137182.1| ribonuclease III-modulating protein YmdB [Geobacter bemidjiensis
Bem]
gi|197086115|gb|ACH37386.1| O-acetyl-ADP-ribose deacetylase [Geobacter bemidjiensis Bem]
Length = 177
Score = 39.7 bits (91), Expect = 5.0, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 41/89 (46%), Gaps = 21/89 (23%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDITR+ + I NAAN L GGGGV+ AI AAGP L +A G +
Sbjct: 15 GDITRI------AVDAIVNAANGTLL-GGGGVDGAIHRAAGPEL-LAECRTLSGCATGEA 66
Query: 410 VIVP---LPSTSPLCGREGVTHVIHVLGP 435
I LP+ HVIH +GP
Sbjct: 67 KITAGYRLPA----------RHVIHTVGP 85
>gi|242041011|ref|XP_002467900.1| hypothetical protein SORBIDRAFT_01g036100 [Sorghum bicolor]
gi|241921754|gb|EER94898.1| hypothetical protein SORBIDRAFT_01g036100 [Sorghum bicolor]
Length = 200
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT G + I NAAN R+ GGGGV+ AI AAGP L V + + PG
Sbjct: 28 GDITLWSVDG--ATDAIVNAANERML-GGGGVDGAIHRAAGPEL-VQACRKVPEVKPGVR 83
Query: 410 VIVPLPSTSPLCGREGVTHVIHVLGP 435
+P V+ VIH +GP
Sbjct: 84 CPTGEARITPAF-ELPVSRVIHTVGP 108
>gi|209732472|gb|ACI67105.1| MACRO domain-containing protein 1 [Salmo salar]
Length = 391
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 44/96 (45%), Gaps = 21/96 (21%)
Query: 343 KKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAK 402
KK F GDIT+L G I NAAN L GGGGV+ AI AGP L AE +
Sbjct: 211 KKISLFSGDITKLEIDG------IVNAANKTLL-GGGGVDGAIHRTAGPLLRSECAE-LR 262
Query: 403 SLYPGNSVIV---PLPSTSPLCGREGVTHVIHVLGP 435
G + I LP+ +VIH +GP
Sbjct: 263 GCETGEAKITGGYGLPA----------KYVIHTVGP 288
>gi|377569269|ref|ZP_09798439.1| serine/threonine protein phosphatase PrpA [Gordonia terrae NBRC
100016]
gi|377533604|dbj|GAB43604.1| serine/threonine protein phosphatase PrpA [Gordonia terrae NBRC
100016]
Length = 830
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 16/161 (9%)
Query: 22 LVIMVGAPGSGKSTFCEHVMR-----SSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV++VG GSGKS F R SS A I D ++ + L A L
Sbjct: 11 LVVLVGTSGSGKSVFAATHFRPTEVVSSDECRAMISDDPNDQAATPDAFGLLEYIAGKRL 70
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
+G+ +D N++ R + L +V A+VLDLP L + R+ R + +
Sbjct: 71 DRGRLTVVDATNVQASARRSLLALAKDHDVLPVAIVLDLPVALTLERNASRPDRD----- 125
Query: 135 GKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAA 172
A VV R ++ L L EGF I + + V +A
Sbjct: 126 -FGAHVVKRQHDQLRRSLRNLKREGFRTIHVLDSPEAVASA 165
>gi|417838295|ref|ZP_12484533.1| Macro domain, possibly ADP-ribose binding module [Lactobacillus
johnsonii pf01]
gi|338761838|gb|EGP13107.1| Macro domain, possibly ADP-ribose binding module [Lactobacillus
johnsonii pf01]
Length = 168
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 44/98 (44%), Gaps = 21/98 (21%)
Query: 345 FFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSL 404
+ DIT+L + I NAAN R GGGGV+ AI AAGP L +A K
Sbjct: 4 LYVIQADITKLKV------DAIVNAAN-RTLLGGGGVDGAIHRAAGPEL-LAECRTLKGC 55
Query: 405 YPGNSVIVP---LPSTSPLCGREGVTHVIHVLGPNMNP 439
G + I LP+ +VIH +GP NP
Sbjct: 56 DTGEAKITKGYNLPA----------KYVIHTVGPVYNP 83
>gi|385826617|ref|YP_005862959.1| hypothetical protein [Lactobacillus johnsonii DPC 6026]
gi|329668061|gb|AEB94009.1| hypothetical protein LJP_1693c [Lactobacillus johnsonii DPC 6026]
Length = 164
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 44/98 (44%), Gaps = 21/98 (21%)
Query: 345 FFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSL 404
+ DIT+L + I NAAN R GGGGV+ AI AAGP L +A K
Sbjct: 4 LYVIQADITKLKV------DAIVNAAN-RTLLGGGGVDGAIHRAAGPEL-LAECRTLKGC 55
Query: 405 YPGNSVIVP---LPSTSPLCGREGVTHVIHVLGPNMNP 439
G + I LP+ +VIH +GP NP
Sbjct: 56 DTGEAKITKGYNLPA----------KYVIHTVGPVYNP 83
>gi|168032733|ref|XP_001768872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679784|gb|EDQ66226.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 207
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT+ + G + I NAAN R+ GGGGV+ AI +AAG L AT K +
Sbjct: 35 GDITKWHIDGK--TDAIVNAANERM-VGGGGVDGAIHAAAGKQLLEAT----KKIPISEG 87
Query: 410 VIVPLPSTSPLCG-REGVTHVIHVLGP 435
V P+ S G + V+ +IH +GP
Sbjct: 88 VRCPVGSAVLTPGFKLPVSKIIHTVGP 114
>gi|449491648|ref|XP_004158963.1| PREDICTED: macro domain-containing protein VPA0103-like [Cucumis
sativus]
Length = 247
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 52/113 (46%), Gaps = 18/113 (15%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT+ + G + I N AN ++ GGGG + AI +AAGP L V + + PG
Sbjct: 78 GDITKWFIDGS--SDAIVNPAN-QVMLGGGGADGAIHNAAGPDL-VQACYSVQEVQPG-- 131
Query: 410 VIVPLPSTSPLCGRE-GVTHVIHVLGPNMNP-RRPNCLDGDYVKGCEILRKAY 460
+ P G + +HVIH +GP N R P L LR AY
Sbjct: 132 IRCPTGEARITPGFQLPASHVIHTVGPIYNASRNPQAL----------LRSAY 174
>gi|357112330|ref|XP_003557962.1| PREDICTED: macro domain-containing protein VPA0103-like
[Brachypodium distachyon]
Length = 239
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT G + I NAAN R+ GGGGV+ AI AAGP L V + + PG
Sbjct: 67 GDITLWSVDGA--TDAIVNAANERML-GGGGVDGAIHRAAGPQL-VEACRKVPEVEPGVR 122
Query: 410 VIVPLPSTSPLCGREGVTHVIHVLGP 435
+P + V+ VIH +GP
Sbjct: 123 CPTGEARITP-AFKLPVSSVIHTVGP 147
>gi|320534521|ref|ZP_08034978.1| RNase III regulator YmdB [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320133254|gb|EFW25745.1| RNase III regulator YmdB [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 182
Score = 39.7 bits (91), Expect = 5.6, Method: Composition-based stats.
Identities = 37/96 (38%), Positives = 44/96 (45%), Gaps = 25/96 (26%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL-----EVATAERAKS 403
VGDIT + I NAAN L GGGGV+ AI AAGP+L +V E
Sbjct: 7 VGDITTEKV------DAIVNAANSTLL-GGGGVDGAIHRAAGPSLLDACQKVRDTELPDG 59
Query: 404 LYPGNSVIVP---LPSTSPLCGREGVTHVIHVLGPN 436
L G +V P LP+ VIH +GPN
Sbjct: 60 LPVGRAVATPGFDLPA----------AWVIHTVGPN 85
>gi|298242106|ref|ZP_06965913.1| metallophosphoesterase [Ktedonobacter racemifer DSM 44963]
gi|297555160|gb|EFH89024.1| metallophosphoesterase [Ktedonobacter racemifer DSM 44963]
Length = 853
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 13/114 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQ------CLTSASSAL 75
LV+++G GSGKSTF + + + C+ ++ ++ + A L
Sbjct: 10 LVVLIGPSGSGKSTFARTHFKPTETISSDFCRGLVSDDENDQTISSDAFDVLYYIAGKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHA----VVLDLPAKLCISRSVKR 125
GK +D N+ E R +L HA +V +LP KLC R+ +R
Sbjct: 70 ALGKLTVIDATNVRAEDRKRLFELAR---TYHALAVGIVFNLPEKLCHERNSQR 120
>gi|336119022|ref|YP_004573794.1| serine/threonine protein phosphatase PrpA [Microlunatus
phosphovorus NM-1]
gi|334686806|dbj|BAK36391.1| serine/threonine protein phosphatase PrpA [Microlunatus
phosphovorus NM-1]
Length = 839
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 23 VIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCL-TSASSALK 76
++++G GSGKSTF +++ + +C+ D ++ + + L T L+
Sbjct: 1 MVLIGVSGSGKSTFAARHFKATEVVSSDVCRGLVADDENDQAATKPAFELLHTIVGIRLR 60
Query: 77 KGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKR 125
+G+ +D N++ E R V L E DV A+VLD+P +C R+ R
Sbjct: 61 EGRLAVVDATNVQPEGRKALVAL-AKEHDVLPVAIVLDVPPAVCRDRNRSR 110
>gi|148255143|ref|YP_001239728.1| protein serine-threonine phosphatase [Bradyrhizobium sp. BTAi1]
gi|146407316|gb|ABQ35822.1| polynucleotide 5'-hydroxyl-kinase / polynucleotide 3'-phosphatase /
polynucleotide 2',3'-cyclic phosphate phosphodiesterase
[Bradyrhizobium sp. BTAi1]
Length = 852
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 22 LVIMVGAPGSGKSTF-CEHVMR----SSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV+++G+ GSGKSTF +H + SS A + D ++G S + A L
Sbjct: 10 LVVLIGSTGSGKSTFAAKHFLPTEVISSDHCRALVADDETDQGVSADAFDIVREIAGKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH-AVVLDLPAKLCISRSVKRIEHEGNLQG 134
K + +D N+ R +V+L + A+V D +CI+R+ R E G
Sbjct: 70 KHRRLAVIDATNVRPADRKGWVELARKWHALPVAIVFDPGIDVCIARNKTRPERS---FG 126
Query: 135 GKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAA 172
G VV RM+Q ++ L L EGF ++ + + AA
Sbjct: 127 GP---VVQRMVQEIRRGLGGLQREGFRQVWKLDSVERIAAA 164
>gi|453069391|ref|ZP_21972652.1| hydrolase [Rhodococcus qingshengii BKS 20-40]
gi|452763190|gb|EME21472.1| hydrolase [Rhodococcus qingshengii BKS 20-40]
Length = 645
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 52/113 (46%), Gaps = 20/113 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPA-LEVATAERAKSLYPGN 408
GDIT L + I NAAN RL GGGGV+ AI A GP L+ R SL G
Sbjct: 485 GDITTL------TVDAIVNAANSRLL-GGGGVDGAIHRAGGPEILKACEVLRNTSLPDGL 537
Query: 409 SVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYT 461
V + +T+ G+ VIH +GP + R G +LR AYT
Sbjct: 538 PVGAAVATTA---GKLHAKAVIHTVGPRYS--RSEDRSG-------LLRSAYT 578
>gi|443898985|dbj|GAC76318.1| hismacro and SEC14 domain-containing proteins [Pseudozyma
antarctica T-34]
Length = 220
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 52/119 (43%), Gaps = 28/119 (23%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT L + I NAAN L GGGGV+ AI AAGP+L +A + G +
Sbjct: 43 GDITTLEV------DAIVNAANTSLL-GGGGVDGAIHRAAGPSL-LAECRKLNGCKTGEA 94
Query: 410 VIVP---LPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFE 465
+ LP+ HVIH +GP + P + +LR AY + E
Sbjct: 95 KLTAAYDLPA----------KHVIHTVGPVYSSHDP-------ARAETLLRNAYNNSLE 136
>gi|57234216|ref|YP_181747.1| hypothetical protein DET1031 [Dehalococcoides ethenogenes 195]
gi|57224664|gb|AAW39721.1| conserved domain protein [Dehalococcoides ethenogenes 195]
Length = 182
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 16/164 (9%)
Query: 21 ILVIMVGAPGSGKSTFCEH--------VMRSSARPWARICQDTINKGKSGTKVQCL-TSA 71
L+I+VG PG+GKSTF +H V+ S A + Q + + T
Sbjct: 9 FLLILVGLPGTGKSTFAKHFVEHIPAVVLESDALRKTLVTQPVYTDTEHTRVFTAVHTLM 68
Query: 72 SSALKKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEG 130
+ LK+ S+ LD +L + R K+ G V V +DLP ++ +RI
Sbjct: 69 AKLLKQKVSLVLDATSLTAKDREPLYKIASGAGVRNFVVEIDLPPEIIKKHLNERI---- 124
Query: 131 NLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALD 174
Q G + + + + + PK + ++E+D Q L+
Sbjct: 125 --QQGTSRSDADWEIYLQLRPKFEPVSGKCYRIKSESDFQPVLE 166
>gi|268536392|ref|XP_002633331.1| Hypothetical protein CBG06070 [Caenorhabditis briggsae]
Length = 199
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT L + I NAAN RL GGGGV+ AI AAG A + G++
Sbjct: 30 GDITNL------TVDAIVNAANSRL-AGGGGVDGAIHRAAGRNELQAECRKYNGCAVGDA 82
Query: 410 VIVPLPSTSPLCGREGVTHVIHVLGPNM 437
VI + C + +IH +GP +
Sbjct: 83 VI------TSGCNVNHIKKIIHTVGPQV 104
>gi|289522731|ref|ZP_06439585.1| RNase III regulator YmdB [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289504567|gb|EFD25731.1| RNase III regulator YmdB [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 175
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 44/96 (45%), Gaps = 20/96 (20%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDITR + NAAN L+PGGG V AI AAGP L+ A + PG +
Sbjct: 15 GDITRQPD-----VTAVVNAANAWLRPGGG-VAGAIHHAAGPELDKECRPLA-PIKPGQA 67
Query: 410 VIVP---LPSTSPLCGREGVTHVIHVLGPNMNPRRP 442
VI LP+ +VIH LGP +P
Sbjct: 68 VITGGHNLPN----------KYVIHCLGPRYGVDKP 93
>gi|84517299|ref|ZP_01004653.1| major tail protein, TP901-1 family [Loktanella vestfoldensis SKA53]
gi|84508779|gb|EAQ05242.1| major tail protein, TP901-1 family [Loktanella vestfoldensis SKA53]
Length = 138
Score = 39.3 bits (90), Expect = 6.2, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 21/111 (18%)
Query: 308 VNKLGNARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIA 367
V + G L+ +D+T + +L +A + +N + D+T L + GG
Sbjct: 2 VAQNGKDLLIKIDMTGDGQFETLAGLRATRISLNAETV-----DVTSLDSTGG------- 49
Query: 368 NAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLY-----PGNSVIVP 413
WR GG GV A S AG + AT ERA+ ++ P VI+P
Sbjct: 50 ----WRELLGGAGVKTAAISGAGVFKDDATDERARQIFFGGLMPDFQVIIP 96
>gi|229821883|ref|YP_002883409.1| Appr-1-p processing protein [Beutenbergia cavernae DSM 12333]
gi|229567796|gb|ACQ81647.1| Appr-1-p processing domain protein [Beutenbergia cavernae DSM
12333]
Length = 193
Score = 39.3 bits (90), Expect = 6.2, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGR 423
+V+ NAAN L GGGGV+ AI AAGP+L + +++ P + +T G
Sbjct: 22 DVVVNAANPSLL-GGGGVDGAIHRAAGPSLLAECQDLRRTVLPRGLSVGDAVATG--AGN 78
Query: 424 EGVTHVIHVLGPN--MNPRRPNCLDGDYVKGCEI 455
V+H +GPN + R P L + + ++
Sbjct: 79 LPALWVVHTVGPNAHVGQRDPALLASCFTRSLDV 112
>gi|226188293|dbj|BAH36397.1| putative hydrolase [Rhodococcus erythropolis PR4]
Length = 600
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 52/113 (46%), Gaps = 20/113 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPA-LEVATAERAKSLYPGN 408
GDIT L + I NAAN RL GGGGV+ AI A GP L+ R SL G
Sbjct: 440 GDITTL------TVDAIVNAANSRLL-GGGGVDGAIHRAGGPEILKACEVLRNTSLPDGL 492
Query: 409 SVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYT 461
V + +T+ G+ VIH +GP + R G +LR AYT
Sbjct: 493 PVGAAVATTA---GKLHAKAVIHTVGPRYS--RSEDRSG-------LLRSAYT 533
>gi|449457407|ref|XP_004146440.1| PREDICTED: macro domain-containing protein VPA0103-like [Cucumis
sativus]
Length = 247
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 54/123 (43%), Gaps = 38/123 (30%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL--------EVATAERA 401
GDIT+ + G + I N AN ++ GGGG + AI +AAGP L EV R
Sbjct: 78 GDITKWFIDGS--SDAIVNPAN-QVMLGGGGADGAIHNAAGPDLIQACYSVQEVQPGIRC 134
Query: 402 KSLYPGNSVIVP---LPSTSPLCGREGVTHVIHVLGPNMNP-RRPNCLDGDYVKGCEILR 457
+ G + I P LP+ +HVIH +GP N R P L LR
Sbjct: 135 PT---GEARITPGFQLPA----------SHVIHTVGPIYNASRNPQAL----------LR 171
Query: 458 KAY 460
AY
Sbjct: 172 SAY 174
>gi|379010051|ref|YP_005267863.1| hypothetical protein Awo_c01650 [Acetobacterium woodii DSM 1030]
gi|375300840|gb|AFA46974.1| hypothetical protein Awo_c01650 [Acetobacterium woodii DSM 1030]
Length = 342
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 361 LCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPL 420
+ ++I NAAN LK GGG V AIF+AAG A +R S G +VI S L
Sbjct: 13 MSVDIIVNAANTALKMGGG-VCGAIFAAAGAKQLQAECDRIGSCAVGAAVIT---SAYQL 68
Query: 421 CGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTS 462
++ +IH +GP G E+L AYT+
Sbjct: 69 PAKK----IIHTVGP--------IWQGGAANEAELLHNAYTN 98
>gi|255559685|ref|XP_002520862.1| Protein LRP16, putative [Ricinus communis]
gi|223539993|gb|EEF41571.1| Protein LRP16, putative [Ricinus communis]
Length = 269
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT+ + G + I N AN ++ GGGG + AI AAGP L V + + PG
Sbjct: 100 GDITKWFVDGS--SDAIVNPANEKML-GGGGADGAIHRAAGPEL-VDACYKVPEVRPGIR 155
Query: 410 VIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAY 460
+P + +HVIH +GP + R IL+ AY
Sbjct: 156 CPTGEARITP-GFKLPASHVIHTVGPIYDANR---------NSAAILKNAY 196
>gi|229491495|ref|ZP_04385316.1| ADP-ribosylation/Crystallin J1 [Rhodococcus erythropolis SK121]
gi|229321176|gb|EEN86976.1| ADP-ribosylation/Crystallin J1 [Rhodococcus erythropolis SK121]
Length = 645
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 52/113 (46%), Gaps = 20/113 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPA-LEVATAERAKSLYPGN 408
GDIT L + I NAAN RL GGGGV+ AI A GP L+ R SL G
Sbjct: 485 GDITTL------TVDAIVNAANSRLL-GGGGVDGAIHRAGGPEILKACEVLRNTSLPDGL 537
Query: 409 SVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYT 461
V + +T+ G+ VIH +GP + R G +LR AYT
Sbjct: 538 PVGAAVATTA---GKLHAKAVIHTVGPRYS--RSEDRSG-------LLRSAYT 578
>gi|326527399|dbj|BAK04641.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 200
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT G + I NAAN R+ GGGGV+ AI AAGP L V + + PG
Sbjct: 28 GDITLWSVDG--ATDAIVNAANERML-GGGGVDGAIHQAAGPQL-VEACRKVPEVKPGVR 83
Query: 410 VIVPLPSTSPLCGREGVTHVIHVLGP 435
+P V+ VIH +GP
Sbjct: 84 CPTGEARITPAF-ELPVSRVIHTVGP 108
>gi|373486376|ref|ZP_09577051.1| calcineurin-like phasphoesterase [Holophaga foetida DSM 6591]
gi|372011951|gb|EHP12537.1| calcineurin-like phasphoesterase [Holophaga foetida DSM 6591]
Length = 851
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQ-----DTINKGKSGTKVQCLT-SASSAL 75
LV++VG GSGKSTF S+ + C+ D ++ + + L + L
Sbjct: 11 LVLLVGPSGSGKSTFARAHFGSTECVSSDFCRGLVSDDENDQAATPDAFEVLNLIVAKRL 70
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKR 125
G+ +D NL E R + L V A+V DLP ++C R+ +R
Sbjct: 71 AAGRLTVVDATNLRPEDRKRLIALAREYHVLTVAIVFDLPERVCQERNRER 121
>gi|404217142|ref|YP_006671364.1| metallophosphoesterase [Gordonia sp. KTR9]
gi|403647941|gb|AFR51181.1| metallophosphoesterase [Gordonia sp. KTR9]
Length = 830
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 62/145 (42%), Gaps = 15/145 (10%)
Query: 22 LVIMVGAPGSGKSTFC-EHVM----RSSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV++VG GSGKS F H + SS A + D ++G + L L
Sbjct: 11 LVVLVGTSGSGKSVFAGTHFLPTEVVSSDDCRAMVSDDPNDQGATTDAFDLLEYIVGKRL 70
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLG-GPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
+G+ +D N++ R V L +V A+VLDLP L + R+ R + +
Sbjct: 71 DRGRLTVVDATNVQASARKSLVALAKDHDVLPVAIVLDLPVALALERNASRPDRD----- 125
Query: 135 GKAAAVVNRMLQKKELPKLSEGFSR 159
A VV R Q +L + G R
Sbjct: 126 -FGAHVVKR--QHDQLRRSLRGLKR 147
>gi|403713558|ref|ZP_10939658.1| serine/threonine protein phosphatase PrpA [Kineosphaera limosa NBRC
100340]
gi|403212322|dbj|GAB94341.1| serine/threonine protein phosphatase PrpA [Kineosphaera limosa NBRC
100340]
Length = 836
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 12/159 (7%)
Query: 22 LVIMVGAPGSGKSTFCE-----HVMRSSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV +VG GSGKSTF H + SS A + D ++ + L A L
Sbjct: 11 LVALVGVSGSGKSTFAARAFEPHEVLSSDACRALVSGDENDQSATRDAFDVLGYIAGKRL 70
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQG 134
+G +D +L ++ R V L +V A+VLD+ KL I R+ +R + Q
Sbjct: 71 DRGLLTVVDATSLTKDARAQIVTLARQHDVLPVAIVLDVGEKLAIDRNRERPDR----QF 126
Query: 135 GKAAAVVNRMLQKKELPKLS-EGFSRITLCQNENDVQAA 172
G ++ ++ L L EGF + + +++ +V AA
Sbjct: 127 GDGVVRRHQAQLRRSLKGLGREGFRVVHVLRSQVEVDAA 165
>gi|374311414|ref|YP_005057844.1| bis(5'-nucleosyl)-tetraphosphatase [Granulicella mallensis
MP5ACTX8]
gi|358753424|gb|AEU36814.1| Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) [Granulicella
mallensis MP5ACTX8]
Length = 849
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 13/114 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTI-----NKGKSGTKVQCL-TSASSAL 75
LV+++G GSGKS+F S + C+ + ++ +G L T L
Sbjct: 10 LVLLIGPSGSGKSSFGRKHFLPSEVVSSDFCRGLVSNNENDQSATGDAFDLLNTILRKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKR 125
+G +D N++ E R ++L + H A+V DLP KLC R+ R
Sbjct: 70 ARGLLTVVDATNVQPEARKSLLELAH---EFHVLPCAIVFDLPEKLCHERNALR 120
>gi|427731020|ref|YP_007077257.1| putative kinase [Nostoc sp. PCC 7524]
gi|427366939|gb|AFY49660.1| putative kinase [Nostoc sp. PCC 7524]
Length = 203
Score = 39.3 bits (90), Expect = 7.4, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 13/116 (11%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKV----------QCLTSA 71
L++++G PGSGKST ++ S I D I G++ + +
Sbjct: 47 LILLIGLPGSGKSTLARQLV-SECPQMQLISTDAIRGQLFGSEAIQGSWILIWREIIRQF 105
Query: 72 SSALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH--AVVLDLPAKLCISRSVKR 125
A+ GK D N +R R + + L H + + P LC++R+ KR
Sbjct: 106 QQAIFTGKPAIFDATNAQRRHRREIITLARDSGFTHITGIWVRTPVWLCLARNQKR 161
>gi|264678666|ref|YP_003278573.1| hypothetical protein CtCNB1_2531 [Comamonas testosteroni CNB-2]
gi|262209179|gb|ACY33277.1| hypothetical protein CtCNB1_2531 [Comamonas testosteroni CNB-2]
Length = 176
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Query: 342 PKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL 393
P + DIT+L+ G I NAAN L GGGGV+ AI AAGP L
Sbjct: 2 PTRLHAICSDITKLHVGA------IVNAANSSLL-GGGGVDGAIHRAAGPDL 46
>gi|350568978|ref|ZP_08937376.1| appr-1-p processing [Propionibacterium avidum ATCC 25577]
gi|348661221|gb|EGY77917.1| appr-1-p processing [Propionibacterium avidum ATCC 25577]
Length = 176
Score = 38.9 bits (89), Expect = 7.5, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 349 VGDITRLYTG-GGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPG 407
+ +IT L T L + + NAAN RL GGGGV+ AI AAG L A + ++ P
Sbjct: 6 MAEITILRTDITALDVDAVVNAANRRLA-GGGGVDGAIHRAAGSELSAACRKLRETTLPD 64
Query: 408 NSVIVPLP---STSPLCGREGVTHVIHVLGP 435
LP S + G+ VIH +GP
Sbjct: 65 G-----LPTGQSVATTAGKMPAKWVIHTVGP 90
>gi|338811706|ref|ZP_08623911.1| metallophosphoesterase [Acetonema longum DSM 6540]
gi|337276243|gb|EGO64675.1| metallophosphoesterase [Acetonema longum DSM 6540]
Length = 870
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 34/214 (15%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQ------CLTSASSAL 75
LV+++G G GKSTF + + + C+ + ++ V A L
Sbjct: 10 LVLLIGPSGCGKSTFARRHFKPTEVISSDFCRGLVADDENDQAVNNPAFEVLHYIAGKRL 69
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH----AVVLDLPAKLCISRSVKRIEHE-G 130
+ GK +D N++ R ++L D H A+VL+LP ++C R+ R + + G
Sbjct: 70 QLGKLTVVDATNVQEAARKPLLQLAR---DHHCIPVAIVLNLPERVCQDRNKSRTDRQVG 126
Query: 131 NLQGGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGL--------GPL 182
+ A + R L+ EGF ++ + + +V+ L GP
Sbjct: 127 DYVIKNHIAQLRRSLRNLR----KEGFRQVYVLNSPEEVEQVQCRRQPLWNNLKHEHGPF 182
Query: 183 DTL--PHGSFGQKNPDAKIQLGIMKFL--KKVDA 212
D + HG F + K+ L M ++ + VDA
Sbjct: 183 DIIGDVHGCFAE----LKMLLANMGYMVEETVDA 212
>gi|339239499|ref|XP_003381304.1| MACRO domain-containing protein 1 [Trichinella spiralis]
gi|316975673|gb|EFV59080.1| MACRO domain-containing protein 1 [Trichinella spiralis]
Length = 187
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 50/118 (42%), Gaps = 37/118 (31%)
Query: 343 KKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAK 402
KKF + GDIT L N I NAAN L+ GGG V+ AI AAG L TA
Sbjct: 39 KKFSLWQGDITSLEI------NAIVNAANSALRVGGG-VDGAIHRAAGKELSKETAT--- 88
Query: 403 SLYPGNSVIVPLPSTSPLCGREGVTH--------VIHVLGP-NMNPR-----RPNCLD 446
L +P C + +TH VIH +GP + NP NC D
Sbjct: 89 -----------LGGCAPGCAK--ITHGYRLPAKYVIHTVGPTDGNPETLKSCYKNCFD 133
>gi|442323514|ref|YP_007363535.1| hypothetical protein MYSTI_06578 [Myxococcus stipitatus DSM 14675]
gi|441491156|gb|AGC47851.1| hypothetical protein MYSTI_06578 [Myxococcus stipitatus DSM 14675]
Length = 158
Score = 38.9 bits (89), Expect = 8.3, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 22 LVIMVGAPGSGKSTFCE------HVMRSSAR-PWARICQDTINKGKSGTKVQCLTSASSA 74
L++ +G SGKS+F + HV+ S P AR K + +C+ + A
Sbjct: 3 LILFIGLQASGKSSFFQRRFAPTHVLVSKDLWPNAR--------RKEARQQRCV---AEA 51
Query: 75 LKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKL--CISRSVKRIEHEGNL 132
L +GKSV +D + REQR + LG + + +KL C++R+ KR +G
Sbjct: 52 LAEGKSVVVDNTHPTREQRAPLIALGHAQ-GASVIGFYFSSKLSDCLTRNAKR---QGRA 107
Query: 133 QGGKAAAVVNRMLQKKELPKLSEGFS---RITL 162
+ + A L ++ P EGF R+TL
Sbjct: 108 RVPEVALFATAKLLRR--PCREEGFDSLYRVTL 138
>gi|325652136|ref|NP_001191699.1| MACRO domain-containing protein 1 [Sus scrofa]
gi|315620163|gb|ADU52988.1| MACRO domain containing protein 1 [Sus scrofa]
Length = 325
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 22/101 (21%)
Query: 338 KHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL--EV 395
K +N +K F GDIT+L + I NAAN L GGGGV+ I AAGP L E
Sbjct: 148 KQLN-EKISLFRGDITKLEV------DAIVNAANSSLL-GGGGVDGCIHRAAGPLLTDEC 199
Query: 396 ATAERAKSLYPGNSVIVPLPSTSPLCG-REGVTHVIHVLGP 435
T + ++ G + I CG R +VIH +GP
Sbjct: 200 RTLQSCET---GKAKIT--------CGYRLPAKYVIHTVGP 229
>gi|440907353|gb|ELR57508.1| MACRO domain-containing protein 1, partial [Bos grunniens mutus]
Length = 227
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 22/101 (21%)
Query: 338 KHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL--EV 395
K +N +K F GDIT+L + I NAAN L GGGGV+ I AAGP L E
Sbjct: 51 KQLN-EKISLFRGDITKLEV------DAIVNAANSSLL-GGGGVDGCIHRAAGPLLTDEC 102
Query: 396 ATAERAKSLYPGNSVIVPLPSTSPLCG-REGVTHVIHVLGP 435
T + ++ G + I CG R +VIH +GP
Sbjct: 103 RTLQNCET---GKAKIT--------CGYRLPAKYVIHTVGP 132
>gi|256077250|ref|XP_002574920.1| hypothetical protein [Schistosoma mansoni]
gi|353229053|emb|CCD75224.1| hypothetical protein Smp_140900.1 [Schistosoma mansoni]
Length = 194
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 52/109 (47%), Gaps = 23/109 (21%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT L + IANAAN +L+ GGGGV+ AI AAG L + ++ G++
Sbjct: 34 GDITHLQI------DAIANAANSQLR-GGGGVDGAIHRAAGSQL-LEACQKLSGCPTGDA 85
Query: 410 VIVP---LPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEI 455
+ P LPS +VIH +GP R L+ Y K E+
Sbjct: 86 KLTPGFNLPS----------KYVIHCVGP--VGRNDVALESTYRKALEL 122
>gi|319782050|ref|YP_004141526.1| bis(5'-nucleosyl)-tetraphosphatase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167938|gb|ADV11476.1| Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 857
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 16/179 (8%)
Query: 22 LVIMVGAPGSGKSTF-CEHVMR----SSARPWARICQDTINKGKSGTKVQCLTS-ASSAL 75
LV+++G+ GSGKSTF H + SS R A + + ++ S AS L
Sbjct: 16 LVVLIGSTGSGKSTFAARHFLPTEIISSDRCRALVSDNETDQDVSADAFDLAREIASKRL 75
Query: 76 KKGKSVFLDRCNLEREQRTDFVKLGGPEVDVH-AVVLDLPAKLCISRSVKRIEHEGNLQG 134
K K +D N+ R +++L + AVV+D +C++R+ R +
Sbjct: 76 KYRKLAVIDATNVRAADRKAWIELARKWHTLPVAVVIDPGVDVCVARNALRPDRPFG--- 132
Query: 135 GKAAAVVNRMLQ--KKELPKLS-EGFSRITLCQNENDVQAALDTYSGLGPLDTLPHGSF 190
A VV RM +K L L EGF ++ +E + A T L HG F
Sbjct: 133 ---AGVVQRMTTEIRKGLGGLQREGFRQVWKLTSEASIDTARVTRQPLWTDKRDHHGPF 188
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,149,075,788
Number of Sequences: 23463169
Number of extensions: 433532528
Number of successful extensions: 1040449
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 989
Number of HSP's that attempted gapping in prelim test: 1039241
Number of HSP's gapped (non-prelim): 1390
length of query: 636
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 487
effective length of database: 8,863,183,186
effective search space: 4316370211582
effective search space used: 4316370211582
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 80 (35.4 bits)