BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006654
(636 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M041|BH140_ARATH Transcription factor bHLH140 OS=Arabidopsis thaliana GN=BHLH140
PE=4 SV=1
Length = 912
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/582 (56%), Positives = 414/582 (71%), Gaps = 53/582 (9%)
Query: 14 EEKKWKQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASS 73
E K KQI+V+++G PGSGKSTFC+ MRSS RPW+RICQD +N GK+GTK QCL A+
Sbjct: 221 EADKAKQIVVLLIGPPGSGKSTFCDTAMRSSHRPWSRICQDIVNNGKAGTKAQCLKMATD 280
Query: 74 ALKKGKSVFLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQ 133
+L++GKSVF+DRCNL+REQR++F+KLGGPE +VHAVVL+LPA++CISRSVKR HEGNLQ
Sbjct: 281 SLREGKSVFIDRCNLDREQRSEFIKLGGPEFEVHAVVLELPAQVCISRSVKRTGHEGNLQ 340
Query: 134 GGKAAAVVNRMLQKKELPKLSEGFSRITLCQNENDVQAALDTYSGLGPLDTLPHGSFGQK 193
GG+AAAVVN+MLQ KELPK++EGFSRI C ++ DV A++ Y+ LGP+DTLP G FG+K
Sbjct: 341 GGRAAAVVNKMLQSKELPKVNEGFSRIMFCYSDADVDNAVNMYNKLGPMDTLPSGCFGEK 400
Query: 194 NPDAKIQLGIMKFLKKVDA-PSNTGSTASSTQDPVPPQITEEKNSCLEGQEITSLLSDAA 252
D K Q GIMKF KKV A P+++ + A+ N+ + E+T+
Sbjct: 401 KLDTKSQPGIMKFFKKVSALPASSSNEAT--------------NTTRKADEMTA------ 440
Query: 253 GEEVKGTENPEVASVNQNGSSSDVPTLAFPSLSTSDFQFNNEKASDVIIEKVEEFVNKLG 312
N V+ V + GS+ VPTLAFPS+ST+DFQF+ EKASD+I+EK EEF++KLG
Sbjct: 441 --------NVRVSPV-KLGSADIVPTLAFPSISTADFQFDLEKASDIIVEKAEEFLSKLG 491
Query: 313 NARLVLVDLTQGSKILSLVRAKAAQKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANW 372
ARLVLVDL++GSKILSLV+AKA+QK+I+ KFFTFVGDIT+L + GGL CNVIANA NW
Sbjct: 492 TARLVLVDLSRGSKILSLVKAKASQKNIDSAKFFTFVGDITKLRSEGGLHCNVIANATNW 551
Query: 373 RLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHV 432
RLKPGGGGVNAAIF AAGP LE AT RA +L PG +V+VPLPST PL EG+THVIHV
Sbjct: 552 RLKPGGGGVNAAIFKAAGPDLETATRVRANTLLPGKAVVVPLPSTCPLHNAEGITHVIHV 611
Query: 433 LGPNMNPRRPNCLDGDYVKGCEILRKAYTSLFEGFLSIVRSQEKLSKGCNEDIRLEPSVS 492
LGPNMNP RP+ L+ DY KGC+ LR+AYTSLFEGFLS+V+ Q KL K R +
Sbjct: 612 LGPNMNPNRPDNLNNDYTKGCKTLREAYTSLFEGFLSVVQDQSKLPK------RSSQTAV 665
Query: 493 QDHSEDVHGNYISTGDKIKRDGGHEYEQSKKCKTQNEVGTDINLSRAANLSADNEKIGVS 552
D ED IK D E++KK K + NL + D G
Sbjct: 666 SDSGED-----------IKEDS----ERNKKYKGSQDKAVTNNLESES--LEDTRGSGKK 708
Query: 553 TSKAWGSWAQALYRTAMYPERHKDDLLEISDDVVVLNDLYPK 594
SK W +WA AL+ AM+PERH++ +LE D++VV+ND YPK
Sbjct: 709 MSKGWNTWALALHSIAMHPERHENVVLEYLDNIVVINDQYPK 750
>sp|O13911|PNK1_SCHPO Bifunctional polynucleotide phosphatase/kinase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pnk1 PE=1 SV=2
Length = 408
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 20 QILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGK 79
Q +V++VG P SGKST E + + + R+ QD + TK +C+ +A ALKK K
Sbjct: 256 QEIVVLVGFPSSGKSTLAESQIVTQG--YERVNQDILK-----TKSKCIKAAIEALKKEK 308
Query: 80 SVFLDRCNLEREQRTDFVKLGGP-EVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAA 138
SV +D N E R ++ + E+ + + L +L +V R H Q + A
Sbjct: 309 SVVIDNTNPTIESRKMWIDIAQEFEIPIRCIHLQSSEELARHNNVFRYIHHNQKQLPEIA 368
Query: 139 AVVNRMLQKKELPKLSEGFSRI 160
N + ++P + EGF+ +
Sbjct: 369 --FNSFKSRFQMPTVEEGFTNV 388
>sp|Q5UQD2|PNKP_MIMIV Putative bifunctional polynucleotide phosphatase/kinase
OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L469 PE=3
SV=1
Length = 421
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 15/147 (10%)
Query: 19 KQILVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKG 78
K+ +++M+G PGSGKS F ++ + + + I QD K TK +CL+ +AL KG
Sbjct: 257 KKEMIVMIGQPGSGKSFFVKNYILPNG--YVHINQD-----KCKTKAKCLSETENALSKG 309
Query: 79 KSVFLDRCN---LEREQRTDFVKLGGPEVDVHAVVLDLPAKLCIS-RSVKRIEHEGNLQG 134
KSV +D N + R T+ K + V A++++ P +L +V+ I G +
Sbjct: 310 KSVVIDNTNPDVISRMTYTNLAKENNYD-HVRAIIMETPDELAKHLNNVRHIYSSGTV-- 366
Query: 135 GKAAAVVNRMLQKKE-LPKLSEGFSRI 160
K + + +K LP+ E F +I
Sbjct: 367 PKVTDIAYNIYRKNFVLPQYEENFDKI 393
>sp|Q19683|YZR5_CAEEL Uncharacterized protein F21D5.5 OS=Caenorhabditis elegans
GN=F21D5.5 PE=2 SV=2
Length = 407
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+++MVG PGSGKSTF + M + + +DTI GT +C+ + S L GKSV
Sbjct: 252 IILMVGFPGSGKSTFAK--MLGHQHDYKIVNRDTI-----GTWQKCVAATRSYLADGKSV 304
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D + + E R ++ + E+ V ++ + ++ R + + +++V
Sbjct: 305 VIDNTSPDLESRKRYIDV-AKELGVPIRCFEMNCSMEHAQHNIRFRVLTDDNAAEISSMV 363
Query: 142 NRMLQKKEL-PKLSEGFSRIT 161
R+ + K + P LSEGFS+I
Sbjct: 364 LRIHKGKYVEPTLSEGFSQIV 384
>sp|Q96T60|PNKP_HUMAN Bifunctional polynucleotide phosphatase/kinase OS=Homo sapiens
GN=PNKP PE=1 SV=1
Length = 521
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C+T+ +ALK+GK V
Sbjct: 367 VVVAVGFPGAGKSTFLKKHLVSAG--YVHVNRDTL-----GSWQRCVTTCETALKQGKRV 419
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +V+ V A L +R R + + +V
Sbjct: 420 AIDNTNPDAASRARYVQCAR-AAGVPCRCFLFTATLEQARHNNRFREMTDSSHIPVSDMV 478
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGFS I
Sbjct: 479 MYGYRKQFEAPTLAEGFSAI 498
>sp|Q9JLV6|PNKP_MOUSE Bifunctional polynucleotide phosphatase/kinase OS=Mus musculus
GN=Pnkp PE=1 SV=2
Length = 522
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 22 LVIMVGAPGSGKSTFCEHVMRSSARPWARICQDTINKGKSGTKVQCLTSASSALKKGKSV 81
+V+ VG PG+GKSTF + + S+ + + +DT+ G+ +C++S +AL++GK V
Sbjct: 366 VVVAVGFPGAGKSTFIQEHLVSAG--YVHVNRDTL-----GSWQRCVSSCQAALRQGKRV 418
Query: 82 FLDRCNLEREQRTDFVKLGGPEVDVHAVVLDLPAKLCISRSVKRIEHEGNLQGGKAAAVV 141
+D N + R +++ + V + A + +R R + + +V
Sbjct: 419 VIDNTNPDVPSRARYIQCAK-DAGVPCRCFNFCATIEQARHNNRFREMTDPSHAPVSDMV 477
Query: 142 NRMLQKK-ELPKLSEGFSRI 160
+K+ E P L+EGF I
Sbjct: 478 MFSYRKQFEPPTLAEGFLEI 497
>sp|C9Y0V8|YMDB_CROTZ O-acetyl-ADP-ribose deacetylase OS=Cronobacter turicensis (strain
DSM 18703 / LMG 23827 / z3032) GN=ymdB PE=3 SV=1
Length = 176
Score = 47.0 bits (110), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 45/89 (50%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDITR+ T +VI NAAN L GGGGV+ AI AAGP+L A ++ P
Sbjct: 10 GDITRIDT------DVIVNAANPSLM-GGGGVDGAIHRAAGPSLLAACKVVRQQQGECQP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI G VIH +GP
Sbjct: 63 GHAVITE-------AGDLAAKAVIHTVGP 84
>sp|D3RKJ0|YMDB_KLEVT O-acetyl-ADP-ribose deacetylase OS=Klebsiella variicola (strain
At-22) GN=ymdB PE=3 SV=1
Length = 175
Score = 45.4 bits (106), Expect = 0.001, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 46/90 (51%), Gaps = 17/90 (18%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLY 405
+GDIT L +VI NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 9 LGDITTLEV------DVIVNAANPSLL-GGGGVDGAIHRAAGPALLAACKQVLQQQGECP 61
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PG++VI + G + VIH +GP
Sbjct: 62 PGHAVIT-------IAGDLPASAVIHTVGP 84
>sp|B5XXK9|YMDB_KLEP3 O-acetyl-ADP-ribose deacetylase OS=Klebsiella pneumoniae (strain
342) GN=ymdB PE=3 SV=1
Length = 175
Score = 45.4 bits (106), Expect = 0.001, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 46/90 (51%), Gaps = 17/90 (18%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLY 405
+GDIT L +VI NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 9 LGDITTLEV------DVIVNAANPSLL-GGGGVDGAIHRAAGPALLAACKQVLQQQGECP 61
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PG++VI + G + VIH +GP
Sbjct: 62 PGHAVIT-------IAGDLPASAVIHTVGP 84
>sp|B5RBF3|YMDB_SALG2 O-acetyl-ADP-ribose deacetylase OS=Salmonella gallinarum (strain
287/91 / NCTC 13346) GN=ymdB PE=3 SV=1
Length = 179
Score = 45.4 bits (106), Expect = 0.001, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 53/116 (45%), Gaps = 25/116 (21%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDIT+L + I NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 10 GDITQL------SVDAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKLIRQQQGECQT 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTS 462
G++VI P G+ VIH +GP G + E+L +AY S
Sbjct: 63 GHAVITP-------AGKLSAKAVIHTVGP--------VWRGGEHQEAELLEEAYRS 103
>sp|B5F961|YMDB_SALA4 O-acetyl-ADP-ribose deacetylase OS=Salmonella agona (strain SL483)
GN=ymdB PE=3 SV=1
Length = 179
Score = 45.4 bits (106), Expect = 0.001, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDIT+L + I NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 10 GDITQL------SVDAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKLIRQQQGECQT 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI P G+ VIH +GP
Sbjct: 63 GHAVITP-------AGKLSAKAVIHTVGP 84
>sp|B4T2X8|YMDB_SALNS O-acetyl-ADP-ribose deacetylase OS=Salmonella newport (strain
SL254) GN=ymdB PE=3 SV=1
Length = 179
Score = 45.4 bits (106), Expect = 0.001, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDIT+L + I NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 10 GDITQL------SVDAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKLIRQQQGECQT 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI P G+ VIH +GP
Sbjct: 63 GHAVITP-------AGKLSAKAVIHTVGP 84
>sp|P67341|YMDB_SALTY O-acetyl-ADP-ribose deacetylase OS=Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720) GN=ymdB PE=3 SV=1
Length = 179
Score = 45.1 bits (105), Expect = 0.002, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDIT+L + I NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 10 GDITQL------SVDAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKLIRQQQGECQT 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI P G+ VIH +GP
Sbjct: 63 GHAVITP-------AGKLSAKAVIHTVGP 84
>sp|P67342|YMDB_SALTI O-acetyl-ADP-ribose deacetylase OS=Salmonella typhi GN=ymdB PE=3
SV=1
Length = 179
Score = 45.1 bits (105), Expect = 0.002, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATA---ERAKSLYP 406
GDIT+L + I NAAN L GGGGV+ AI AAGPAL A ++
Sbjct: 10 GDITQL------SVDAIVNAANASLM-GGGGVDGAIHRAAGPALLDACKLIRQQQGECQT 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI P G+ VIH +GP
Sbjct: 63 GHAVITP-------AGKLSAKAVIHTVGP 84
>sp|Q9HJ67|Y1105_THEAC Uncharacterized protein Ta1105 OS=Thermoplasma acidophilum (strain
ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=Ta1105 PE=4 SV=2
Length = 196
Score = 44.7 bits (104), Expect = 0.002, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGN 408
VGDIT I NAAN L GGGGV+ AI SAAGP L + + YP
Sbjct: 15 VGDITESDA------EAIVNAANSSLM-GGGGVDGAIHSAAGPELNGELVKIRRERYPNG 67
Query: 409 SVIVPLPSTSPLCGREGVTHVIHVLGP 435
+ P + R +H+IH +GP
Sbjct: 68 --LPPGEAVITRGYRLKASHIIHTVGP 92
>sp|D5CE05|YMDB_ENTCC O-acetyl-ADP-ribose deacetylase OS=Enterobacter cloacae subsp.
cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 /
NCDC 279-56) GN=ymdB PE=3 SV=1
Length = 180
Score = 43.5 bits (101), Expect = 0.005, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDIT ++ +VI NAAN L GGGGV+ AI AAGP L A ++ P
Sbjct: 10 GDITTMHV------DVIVNAANPSLM-GGGGVDGAIHRAAGPQLLEACKTVRQQQGECPP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI L G VIH +GP
Sbjct: 63 GHAVIT-------LAGDLPAKAVIHAVGP 84
>sp|Q460N5|PAR14_HUMAN Poly [ADP-ribose] polymerase 14 OS=Homo sapiens GN=PARP14 PE=1 SV=3
Length = 1801
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV---ATAERAKSLYP 406
GD+ RL +V+ NA+N LK GG+ AA+ AAGP L+ +R L P
Sbjct: 809 GDLARL------PVDVVVNASNEDLK-HYGGLAAALSKAAGPELQADCDQIVKREGRLLP 861
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRR-PNCL 445
GN+ I G+ HVIH +GP + P C+
Sbjct: 862 GNATISK-------AGKLPYHHVIHAVGPRWSGYEAPRCV 894
>sp|A4W960|YMDB_ENT38 O-acetyl-ADP-ribose deacetylase OS=Enterobacter sp. (strain 638)
GN=ymdB PE=3 SV=1
Length = 180
Score = 42.7 bits (99), Expect = 0.009, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 44/90 (48%), Gaps = 17/90 (18%)
Query: 349 VGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLY 405
VGDIT + +VI NAAN L GGGGV+ AI AAGP L A ++
Sbjct: 9 VGDITTMEV------DVIVNAANPSLM-GGGGVDGAIHRAAGPQLLEACKTVRQQQGECA 61
Query: 406 PGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
PG++VI + G VIH +GP
Sbjct: 62 PGHAVIT-------IAGDLPAKAVIHAVGP 84
Score = 34.7 bits (78), Expect = 2.2, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 15/95 (15%)
Query: 231 ITEEKNSCLEGQEITSLLSD--------AAGEEVKGTENPEVASVNQN-------GSSSD 275
+ +++ C G + ++ D A G +G EN E ++ +++
Sbjct: 53 VRQQQGECAPGHAVITIAGDLPAKAVIHAVGPVWQGGENHEARTLQDAYLNCLRLAAANG 112
Query: 276 VPTLAFPSLSTSDFQFNNEKASDVIIEKVEEFVNK 310
TLAFP++ST + + A+++ ++ V EF+ +
Sbjct: 113 YKTLAFPAISTGVYGYPKAAAAEIAVDTVSEFLTR 147
>sp|A7MG20|YMDB_CROS8 O-acetyl-ADP-ribose deacetylase OS=Cronobacter sakazakii (strain
ATCC BAA-894) GN=ymdB PE=3 SV=1
Length = 180
Score = 42.7 bits (99), Expect = 0.009, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 43/89 (48%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA---TAERAKSLYP 406
GDIT + +VI NAAN L GGGGV+ AI AAGPAL A ++ P
Sbjct: 10 GDITLIDV------DVIVNAANPSLM-GGGGVDGAIHRAAGPALLAACRQVRQQQGECQP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI G V+H +GP
Sbjct: 63 GHAVITE-------AGDLAAKAVVHTVGP 84
>sp|A8AI35|YMDB_CITK8 O-acetyl-ADP-ribose deacetylase OS=Citrobacter koseri (strain ATCC
BAA-895 / CDC 4225-83 / SGSC4696) GN=ymdB PE=3 SV=1
Length = 177
Score = 42.4 bits (98), Expect = 0.013, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAE--RAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGP L A + + + P
Sbjct: 10 GDITQLTV------DVIVNAANASLL-GGGGVDGAIHRAAGPTLLEACKKVRQQQGECPA 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P VIH +GP
Sbjct: 63 GHAVITLAGNLP------AKAVIHTVGP 84
>sp|P0A8D6|YMDB_ECOLI O-acetyl-ADP-ribose deacetylase OS=Escherichia coli (strain K12)
GN=ymdB PE=1 SV=1
Length = 177
Score = 42.0 bits (97), Expect = 0.015, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGDLP------AKAVVHTVGP 84
>sp|P0A8D7|YMDB_ECOL6 O-acetyl-ADP-ribose deacetylase OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=ymdB PE=3 SV=1
Length = 177
Score = 42.0 bits (97), Expect = 0.015, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGDLP------AKAVVHTVGP 84
>sp|P0A8D8|YMDB_ECO57 O-acetyl-ADP-ribose deacetylase OS=Escherichia coli O157:H7 GN=ymdB
PE=3 SV=1
Length = 177
Score = 42.0 bits (97), Expect = 0.015, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGDLP------AKAVVHTVGP 84
>sp|Q0T5Z6|YMDB_SHIF8 O-acetyl-ADP-ribose deacetylase OS=Shigella flexneri serotype 5b
(strain 8401) GN=ymdB PE=3 SV=1
Length = 177
Score = 41.6 bits (96), Expect = 0.017, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI NAAN L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNAANPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGDLP------AKAVVHTVGP 84
>sp|D2TT52|YMDB_CITRI O-acetyl-ADP-ribose deacetylase OS=Citrobacter rodentium (strain
ICC168) GN=ymdB PE=3 SV=2
Length = 177
Score = 41.6 bits (96), Expect = 0.019, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 43/89 (48%), Gaps = 17/89 (19%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAK-SLYP 406
GDIT + + I NAAN L GGGGV+ AI AAGP L A T R + P
Sbjct: 10 GDITTV------AVDAIVNAANPSLM-GGGGVDGAIHRAAGPELLEACMTVRRQQGECPP 62
Query: 407 GNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
G++VI GR VIH +GP
Sbjct: 63 GHAVITA-------AGRLPAKAVIHTVGP 84
>sp|Q6PAV8|MACD2_XENLA O-acetyl-ADP-ribose deacetylase MACROD2 OS=Xenopus laevis
GN=macrod2 PE=2 SV=1
Length = 418
Score = 41.6 bits (96), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 27/129 (20%)
Query: 318 LVDLTQGSKILSLVRAKAAQKHINPK----------KFFTFVGDITRLYTGGGLCCNVIA 367
V L + ++ +++KA+ +P+ K + GDIT+L + I
Sbjct: 33 YVSLDKIPSLMEELKSKASSDDESPEEIQVKNSLCEKVSFYKGDITQLEV------DAIV 86
Query: 368 NAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCGRE-GV 426
NAAN L GGGGV+ I A+GP+L +A G + I CG E
Sbjct: 87 NAANTSLL-GGGGVDGCIHRASGPSL-LAECRELGGCETGQAKIT--------CGYELPA 136
Query: 427 THVIHVLGP 435
+VIH +GP
Sbjct: 137 KYVIHTVGP 145
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 27/40 (67%)
Query: 271 GSSSDVPTLAFPSLSTSDFQFNNEKASDVIIEKVEEFVNK 310
+ +D+ T+AFP +ST + + NE A++V + V+EF+ K
Sbjct: 170 ATENDIRTIAFPCISTGIYGYPNEPAANVALTTVKEFLKK 209
>sp|B7LT90|YMDB_ESCF3 O-acetyl-ADP-ribose deacetylase OS=Escherichia fergusonii (strain
ATCC 35469 / DSM 13698 / CDC 0568-73) GN=ymdB PE=3 SV=2
Length = 177
Score = 40.8 bits (94), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 344 KFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERA 401
+ GDIT+L +VI NAAN L GGGGV+ AI AAGP L A R
Sbjct: 4 RIHVLQGDITQL------AVDVIVNAANSSLM-GGGGVDGAIHRAAGPELLEACQKVRRQ 56
Query: 402 KSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
+ P ++ + P VIH +GP
Sbjct: 57 QGECPTGHAVITIAGNLP------ARAVIHTVGP 84
>sp|Q9RS39|Y2288_DEIRA Macro domain-containing protein DR_2288 OS=Deinococcus radiodurans
(strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 /
NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=DR_2288
PE=4 SV=1
Length = 170
Score = 40.8 bits (94), Expect = 0.035, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 364 NVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYP-GNSVIVPLPSTSPLCG 422
+ + AAN +L GGGGV+ I AAGP L A R P G +VI P
Sbjct: 16 DAVVTAANKQLM-GGGGVDGVIHRAAGPRL--LQAIRPIGGTPTGTAVITPAFDLE---- 68
Query: 423 REGVTHVIHVLGP 435
R+GV +VIH +GP
Sbjct: 69 RQGVKYVIHAVGP 81
>sp|Q8Y2K1|Y334_RALSO Macro domain-containing protein RSc0334 OS=Ralstonia solanacearum
(strain GMI1000) GN=RSc0334 PE=4 SV=1
Length = 171
Score = 40.4 bits (93), Expect = 0.043, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 21/81 (25%)
Query: 361 LCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLY---PGNSVIVP---L 414
L C+ I NAAN L GGGGV+ AI AAGP L E ++L+ G + I P L
Sbjct: 18 LACDAIVNAANSALL-GGGGVDGAIHRAAGPEL----LEACRALHGCRTGQAKITPGFLL 72
Query: 415 PSTSPLCGREGVTHVIHVLGP 435
P+ ++IH +GP
Sbjct: 73 PA----------RYIIHTVGP 83
>sp|Q6X2U4|POLN_RUBVB Non-structural polyprotein p200 OS=Rubella virus (strain BRD1) PE=3
SV=1
Length = 2116
Score = 40.0 bits (92), Expect = 0.051, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 20/104 (19%)
Query: 363 CNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYP---GNSVIVPLPSTSP 419
C V+ NAAN L G GV AIF++A L AE + L P G +V P
Sbjct: 833 CKVVVNAANEGLL-AGSGVCGAIFASAAATL----AEDCRRLAPCPTGEAVATPGHGC-- 885
Query: 420 LCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSL 463
G TH+IH + P P+ P L+ + +L +AY S+
Sbjct: 886 -----GYTHIIHAVAPR-RPQDPAALE----QSEALLERAYRSV 919
>sp|Q2EMV9|PAR14_MOUSE Poly [ADP-ribose] polymerase 14 OS=Mus musculus GN=Parp14 PE=1 SV=3
Length = 1817
Score = 39.7 bits (91), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 18/103 (17%)
Query: 337 QKHINPK-KFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV 395
Q+ I P K F D++R +V+ NAAN LK G+ A+ AAGP L+
Sbjct: 806 QRDIAPGVKLFVLEEDLSRF------PVDVVVNAANENLK-HISGLAQALSKAAGPELQT 858
Query: 396 ATAERAKS---LYPGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
+ K + PGN+VI G+ HVIH +GP
Sbjct: 859 ECDQIVKEGGVVLPGNAVISK-------AGKLPCHHVIHAVGP 894
>sp|Q8P5Z8|Y3184_XANCP Macro domain-containing protein XCC3184 OS=Xanthomonas campestris
pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=XCC3184 PE=4 SV=1
Length = 179
Score = 39.7 bits (91), Expect = 0.075, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT+L +VI NAAN L GGGGV+ AI AAGP L + E + PG
Sbjct: 8 GDITQLDV------DVIVNAANESLL-GGGGVDGAIHRAAGPRL-LEACEALPEVRPG-- 57
Query: 410 VIVPLPSTSPLCGRE-GVTHVIHVLGP 435
V P G + H+ H +GP
Sbjct: 58 VRCPTGEIRITDGFDLKARHIFHTVGP 84
>sp|Q88SK6|Y3408_LACPL Macro domain-containing protein lp_3408 OS=Lactobacillus plantarum
(strain ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=lp_3408
PE=4 SV=1
Length = 172
Score = 39.7 bits (91), Expect = 0.078, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 21/89 (23%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT++ + I NAAN L GGGGV+ AI AAGPAL +A G +
Sbjct: 9 GDITKMTV------DAIVNAANTSLL-GGGGVDGAIHRAAGPAL-LAACRPLHGCATGEA 60
Query: 410 VIVP---LPSTSPLCGREGVTHVIHVLGP 435
I P LP+ +VIH GP
Sbjct: 61 KITPGFRLPA----------KYVIHTPGP 79
>sp|Q8PHB6|Y3343_XANAC Macro domain-containing protein XAC3343 OS=Xanthomonas axonopodis
pv. citri (strain 306) GN=XAC3343 PE=4 SV=2
Length = 179
Score = 39.3 bits (90), Expect = 0.097, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDIT L +VI NAAN L GGGGV+ AI AAGP L + E + PG
Sbjct: 8 GDITELDV------DVIVNAANESLL-GGGGVDGAIHRAAGPRL-LEACEALPQVRPG-- 57
Query: 410 VIVPLPSTSPLCGRE-GVTHVIHVLGPNMNPRRPN 443
V P G + H+ H +GP R N
Sbjct: 58 VRCPTGEIRITDGFDLKARHIFHTVGPVWRDGRHN 92
>sp|Q6X2U2|POLN_RUBVC Non-structural polyprotein p200 OS=Rubella virus (strain BRDII)
PE=3 SV=1
Length = 2116
Score = 38.9 bits (89), Expect = 0.12, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 20/104 (19%)
Query: 363 CNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYP---GNSVIVPLPSTSP 419
C V+ NAAN L G GV AIF++A +L AE + L P G +V P
Sbjct: 833 CKVVVNAANEGLL-AGSGVCGAIFASAAASL----AEDCRRLAPCPTGEAVATPGHGC-- 885
Query: 420 LCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSL 463
G H+IH + P P+ P L+ + +L +AY S+
Sbjct: 886 -----GYAHIIHAVAPR-RPQDPAALE----QSEALLERAYRSI 919
>sp|Q3UYG8|MACD2_MOUSE O-acetyl-ADP-ribose deacetylase MACROD2 OS=Mus musculus GN=Macrod2
PE=2 SV=1
Length = 475
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 17/94 (18%)
Query: 343 KKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAK 402
+K + GDIT L + I NAAN L GGGGV+ I AAGP L +A
Sbjct: 70 EKVSLYRGDITLLEV------DAIVNAANASLL-GGGGVDGCIHRAAGPCL-LAECRNLN 121
Query: 403 SLYPGNSVIVPLPSTSPLCGRE-GVTHVIHVLGP 435
G++ I CG + +VIH +GP
Sbjct: 122 GCETGHAKIT--------CGYDLPAKYVIHTVGP 147
>sp|Q32E73|YMDB_SHIDS O-acetyl-ADP-ribose deacetylase OS=Shigella dysenteriae serotype 1
(strain Sd197) GN=ymdB PE=3 SV=1
Length = 177
Score = 38.5 bits (88), Expect = 0.15, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 15/88 (17%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA--TAERAKSLYPG 407
GDIT+L +VI N N L GGGGV+ AI AAGPAL A + + P
Sbjct: 10 GDITKL------AVDVIVNVTNPSLM-GGGGVDGAIHRAAGPALLDACLKVRQQQGDCPT 62
Query: 408 NSVIVPLPSTSPLCGREGVTHVIHVLGP 435
++ L P V+H +GP
Sbjct: 63 GHAVITLAGDLP------AKAVVHTVGP 84
>sp|Q2KHU5|MACD1_BOVIN O-acetyl-ADP-ribose deacetylase MACROD1 OS=Bos taurus GN=MACROD1
PE=2 SV=1
Length = 325
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 22/101 (21%)
Query: 338 KHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL--EV 395
K +N +K F GDIT+L + I NAAN L GGGGV+ I AAGP L E
Sbjct: 148 KQLN-EKISLFRGDITKLEV------DAIVNAANSSLL-GGGGVDGCIHRAAGPLLTDEC 199
Query: 396 ATAERAKSLYPGNSVIVPLPSTSPLCG-REGVTHVIHVLGP 435
T + ++ G + I CG R +VIH +GP
Sbjct: 200 RTLQNCET---GKAKIT--------CGYRLPAKYVIHTVGP 229
>sp|A1Z1Q3|MACD2_HUMAN O-acetyl-ADP-ribose deacetylase MACROD2 OS=Homo sapiens GN=MACROD2
PE=1 SV=1
Length = 448
Score = 38.5 bits (88), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 17/94 (18%)
Query: 343 KKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAK 402
+K + GDIT L + I NAAN L GGGGV+ I AAGP L +A
Sbjct: 70 EKVSLYRGDITLLEV------DAIVNAANASLL-GGGGVDGCIHRAAGPCL-LAECRNLN 121
Query: 403 SLYPGNSVIVPLPSTSPLCGRE-GVTHVIHVLGP 435
G++ I CG + +VIH +GP
Sbjct: 122 GCDTGHAKIT--------CGYDLPAKYVIHTVGP 147
>sp|Q9HXU7|Y3693_PSEAE Macro domain-containing protein PA3693 OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=PA3693 PE=4 SV=1
Length = 173
Score = 38.5 bits (88), Expect = 0.18, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 40/89 (44%), Gaps = 21/89 (23%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDITRL + I NAAN L GGGGV+ AI AAG L VA G +
Sbjct: 9 GDITRL------AVDAIVNAANSSLL-GGGGVDGAIHRAAGAEL-VAACRLLHGCKTGEA 60
Query: 410 VIV---PLPSTSPLCGREGVTHVIHVLGP 435
I LP+ HVIH +GP
Sbjct: 61 KITRGFRLPA----------AHVIHTVGP 79
>sp|Q87JZ5|Y4103_VIBPA Macro domain-containing protein VPA0103 OS=Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633) GN=VPA0103 PE=4
SV=1
Length = 170
Score = 38.1 bits (87), Expect = 0.23, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 27/44 (61%), Gaps = 7/44 (15%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL 393
GDIT + + I NAAN R+ GGGGV+ AI AAGPAL
Sbjct: 9 GDITTAHV------DAIVNAANPRML-GGGGVDGAIHRAAGPAL 45
>sp|Q8TQD0|Y1614_METAC Macro domain-containing protein MA_1614 OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=MA_1614 PE=4 SV=1
Length = 195
Score = 38.1 bits (87), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 29/39 (74%), Gaps = 2/39 (5%)
Query: 275 DVPTLAFPSLSTSDFQFNNEKASDVIIEKVEEF--VNKL 311
DV T+AFP++ST + F +E+A+ + + +V+EF VN+L
Sbjct: 132 DVKTIAFPTISTGAYGFPSERAARIAVSQVKEFLKVNEL 170
>sp|Q97AU0|Y719_THEVO Uncharacterized protein TV0719 OS=Thermoplasma volcanium (strain
ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=TV0719 PE=4 SV=1
Length = 186
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 346 FTFVGDITRLYTGG--GLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKS 403
F++ G++ + G + C I NAAN L GGGGV+ AI G +++ AE ++
Sbjct: 4 FSYKGNLIEIIEGDITDVNCEAIVNAANPSLM-GGGGVDGAIHLKGGKTIDLECAELRRT 62
Query: 404 LYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNC--LDGDYVKGCEILR 457
+P + P + G+ +VIH +GP + + L Y + EI +
Sbjct: 63 KWPKG--LPPGEADITSGGKLKAKYVIHTVGPIYRGQEEDAETLYSSYYRSLEIAK 116
>sp|Q8Q0F9|Y177_METMA Macro domain-containing protein MM_0177 OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=MM_0177 PE=4 SV=1
Length = 187
Score = 37.7 bits (86), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 337 QKHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVA 396
+ +N + F GDI ++ + I NAAN L GGGGV+ AI AAGPAL
Sbjct: 13 RMELNIDRIRIFEGDIVKMRV------DAIVNAANNTL-LGGGGVDGAIHRAAGPAL--- 62
Query: 397 TAERAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGP 435
E K+L + + S L + ++IH +GP
Sbjct: 63 -LEECKTLNGCPTGEAKITSGYLLPAK----YIIHTVGP 96
Score = 37.0 bits (84), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 26/35 (74%)
Query: 276 VPTLAFPSLSTSDFQFNNEKASDVIIEKVEEFVNK 310
+ T+AFP++ST + F +E+A+ + + +V+EF+ K
Sbjct: 125 IKTIAFPAISTGAYGFPSERAAGIAVSQVKEFLQK 159
>sp|E1SDF1|YMDB1_PANVC O-acetyl-ADP-ribose deacetylase 1 OS=Pantoea vagans (strain C9-1)
GN=ymdB1 PE=3 SV=1
Length = 171
Score = 37.4 bits (85), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 53/126 (42%), Gaps = 25/126 (19%)
Query: 343 KKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEV---ATAE 399
KK GDIT++ I NAAN L GGGGV+ AI A GP +
Sbjct: 2 KKITVIQGDITKV------SAEAIVNAANSSL-LGGGGVDGAIHRAGGPVILAECQLIRN 54
Query: 400 RAKSLYPGNSVIVPLPSTSPLCGREGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKA 459
R G++VI G +VIH +GP + R D D +L++A
Sbjct: 55 RQGGCKVGDAVITG-------AGNLPADYVIHTVGPRWSDGRH---DED-----ALLKRA 99
Query: 460 YTSLFE 465
Y S F+
Sbjct: 100 YQSCFK 105
>sp|Q8K4G6|MACD1_RAT O-acetyl-ADP-ribose deacetylase MACROD1 (Fragment) OS=Rattus
norvegicus GN=Macrod1 PE=2 SV=2
Length = 258
Score = 37.0 bits (84), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 48/101 (47%), Gaps = 22/101 (21%)
Query: 338 KHINPKKFFTFVGDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPAL--EV 395
K +N +K F GDIT+L + I NAAN L GGGGV+ I AAG L E
Sbjct: 81 KQLN-EKISLFRGDITKLEV------DAIVNAANNSL-LGGGGVDGCIHRAAGSLLTDEC 132
Query: 396 ATAERAKSLYPGNSVIVPLPSTSPLCG-REGVTHVIHVLGP 435
T + ++ G + I CG R HVIH +GP
Sbjct: 133 RTLQNCET---GKAKIT--------CGYRLPAKHVIHTVGP 162
>sp|Q9ZBG3|Y6450_STRCO Macro domain-containing protein SCO6450 OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=SCO6450 PE=4
SV=1
Length = 169
Score = 36.6 bits (83), Expect = 0.56, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 15/89 (16%)
Query: 350 GDITRLYTGGGLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNS 409
GDITR + I NAAN L GGGGV+ AI GPA+ +A R ++ + G
Sbjct: 9 GDITRQ------SADAIVNAANSSLL-GGGGVDGAIHRRGGPAI-LAECRRLRAGHLGKG 60
Query: 410 VIVPLPSTSPLCGREG---VTHVIHVLGP 435
LP+ + G VIH +GP
Sbjct: 61 ----LPTGRAVATTAGDLDARWVIHTVGP 85
>sp|Q9KHE2|Y189_STRGR Macro domain-containing protein in non 5'region OS=Streptomyces
griseus PE=4 SV=1
Length = 177
Score = 36.6 bits (83), Expect = 0.65, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 41/94 (43%), Gaps = 11/94 (11%)
Query: 347 TFVGDITRLYTGG--GLCCNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSL 404
T V + RL G +VI NAAN L GGGGV+ AI GP + A E S
Sbjct: 3 TSVSPVVRLVRGDITDQSVDVIVNAANSSLL-GGGGVDGAIHRRGGPDILAACRELRASR 61
Query: 405 YPGNSVIVPLPS---TSPLCGREGVTHVIHVLGP 435
Y LP+ + GR ++H +GP
Sbjct: 62 YGKG-----LPTGQAVATTAGRLDARWIVHTVGP 90
>sp|P13889|POLN_RUBVT Non-structural polyprotein p200 OS=Rubella virus (strain Therien)
PE=1 SV=5
Length = 2116
Score = 35.8 bits (81), Expect = 0.94, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 363 CNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCG 422
C V+ NAAN L G GV AIF+ A A A R G +V P
Sbjct: 833 CKVVVNAANEGLL-AGSGVCGAIFANA-TAALAANCRRLAPCPTGEAVATPGHGC----- 885
Query: 423 REGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSL 463
G TH+IH + P PR P L+ +G +L +AY S+
Sbjct: 886 --GYTHIIHAVAPR-RPRDPAALE----EGEALLERAYRSI 919
>sp|Q99IE5|POLN_RUBVV Non-structural polyprotein p200 OS=Rubella virus (strain TO-336)
PE=3 SV=1
Length = 2116
Score = 35.8 bits (81), Expect = 1.1, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 363 CNVIANAANWRLKPGGGGVNAAIFSAAGPALEVATAERAKSLYPGNSVIVPLPSTSPLCG 422
C V+ NAAN L G GV AIF+ A A A R G +V P
Sbjct: 833 CKVVVNAANEGLL-AGSGVCGAIFANA-TAALAADCRRLAPCPTGEAVATPGHGC----- 885
Query: 423 REGVTHVIHVLGPNMNPRRPNCLDGDYVKGCEILRKAYTSL 463
G TH+IH + P PR P L+ +G +L +AY S+
Sbjct: 886 --GYTHIIHAVAPR-RPRDPAALE----EGEALLERAYRSI 919
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 243,309,049
Number of Sequences: 539616
Number of extensions: 10530152
Number of successful extensions: 27304
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 27202
Number of HSP's gapped (non-prelim): 161
length of query: 636
length of database: 191,569,459
effective HSP length: 124
effective length of query: 512
effective length of database: 124,657,075
effective search space: 63824422400
effective search space used: 63824422400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)