BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006656
(636 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZT48|ATE1_ARATH Arginyl-tRNA--protein transferase 1 OS=Arabidopsis thaliana GN=ATE1
PE=2 SV=2
Length = 632
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/649 (53%), Positives = 454/649 (69%), Gaps = 42/649 (6%)
Query: 6 MRSEASSSSNN-SNRKGETVVGDCGTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLL 64
++++ASSS + SNR E+V+ D G +S+CGYCKS R+SI+HGL A ++TV DYQ L+
Sbjct: 3 LKNDASSSHDGGSNR--ESVIDDHGRRKSTCGYCKSPARSSISHGLSAQTLTVYDYQALI 60
Query: 65 DRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRRMQRFLDGTVDVEKKS 124
DRGWRRSG++LYK +M++TCCP YTIRL+ASDF P+KEQ+RVSRR++RFLDG +DV+ +
Sbjct: 61 DRGWRRSGTYLYKHEMDKTCCPPYTIRLKASDFVPTKEQQRVSRRLERFLDGKLDVQPR- 119
Query: 125 VELIKDPSTSNCNKVSSSVENNSLSHNNEENNKEEEILQFLSGQIDNAVQLCIVRGQFLS 184
+ S+ VS + + +EEN K E ++ LS ID AVQLCI G+F S
Sbjct: 120 ----EQRGASSSGDVSDTRRKTLGAAKSEENKKVEAVMDDLSKNIDQAVQLCIRSGEFPS 175
Query: 185 GIQLPKASVKKVSQAKRKLLVEGMENLLYTSNIAFQLAATLNRAQLAEKDVQQIRVFGQS 244
+Q+PKASVKKV A+RK L EG E +LYTSNIAF +AA + R Q +EK+ S
Sbjct: 176 NMQIPKASVKKVFCARRKKLAEGTEQILYTSNIAFPIAAAIKRIQTSEKEGIN------S 229
Query: 245 IEDTGPSPKIIAAKLASSLIQLAETSGLSIRACNGHLNFYSAMKQASLDEDV-HIGTVSK 303
E SP+ I+ L S++ ++ ET +SI+ C GH+NF S+ K + D DV G +S+
Sbjct: 230 AEGNRLSPETISEMLLSAMHKVGETPDVSIKVCKGHINFLSSAKDSFSDRDVVPNGNISR 289
Query: 304 ESAKTCESKGGCLKNSSEHPQAKRHKLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVT 363
+ S+ K SE+ QA++ KL+I LKRSSFDP+E ELY+RYQ+KVHNDKP V
Sbjct: 290 GANSLDGSETLHAKKDSENHQARKRKLEIHLKRSSFDPEEHELYKRYQLKVHNDKPGHVV 349
Query: 364 ETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYL 423
E+SYRRFLVDSPL+ V PSGD+ VPPCGFGSFHQQY ID RL+AVGV+DILP+CLSS YL
Sbjct: 350 ESSYRRFLVDSPLIDVQPSGDEKVPPCGFGSFHQQYRIDGRLIAVGVVDILPKCLSSVYL 409
Query: 424 FWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELL 483
FWDPDYAFLSLGKYSA+QEI+WV ENQ CP+LQYYYLGYYIHSC KMRYKAAY PSELL
Sbjct: 410 FWDPDYAFLSLGKYSAIQEINWVIENQARCPSLQYYYLGYYIHSCSKMRYKAAYRPSELL 469
Query: 484 CPLRYQWVPYDIARPLLDRKPYVVLSDFASLQNESS--PCISENVM---GCQHDDIGQGD 538
CPLR+QWVP+++ARP+LD+KPYV+LSD A N+ S SE ++ +H+D+ QG+
Sbjct: 470 CPLRFQWVPFEVARPMLDKKPYVILSDIAISHNQCSLLAGASETLVEPAASEHEDMEQGE 529
Query: 539 SNDVRMD---------------YDYDDEMLDPESESDDDEPDTETSCQTVGVEDGDISNI 583
+ND M D D+EM + ESE E D G +D DI+NI
Sbjct: 530 TNDNFMGCSDEDEDEDEDDDDDDDDDEEMYETESEDSHIESDP-------GSKDNDINNI 582
Query: 584 VIRGQGTRVRYKDIQRVFGPIQRRSLESQLRKYMKVVGAELSERMVYAL 632
+I G++ RYK+++++ P+ R+ LE L+ Y KVVGAELSERMVY +
Sbjct: 583 LIGLYGSQYRYKEMRQIITPVGRKQLEPMLQSYRKVVGAELSERMVYEI 631
>sp|O95260|ATE1_HUMAN Arginyl-tRNA--protein transferase 1 OS=Homo sapiens GN=ATE1 PE=1
SV=2
Length = 518
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 129/192 (67%), Gaps = 13/192 (6%)
Query: 323 PQAKRHKLQIRLKRSSFDPQEF--------ELYRRYQIKVHNDKPDQVTETSYRRFLVDS 374
P+ HKL++R+ RSS +F ++Y+RYQ+ +H + PD TE+ + RFL S
Sbjct: 263 PENASHKLEVRVVRSSPPSSQFKATLLESYQVYKRYQMVIHKNPPDTPTESQFTRFLCSS 322
Query: 375 PL-VFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLS 433
PL PP+G D CG+GSFHQQY +D +++AVGVIDILP C+SS YL++DPDY+FLS
Sbjct: 323 PLEAETPPNGPD----CGYGSFHQQYWLDGKIIAVGVIDILPNCVSSVYLYYDPDYSFLS 378
Query: 434 LGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPY 493
LG YSAL+EI++ ++ L YYY+G+YIHSC KM+YK Y PS+LLCP Y WVP
Sbjct: 379 LGVYSALREIAFTRQLHEKTSQLSYYYMGFYIHSCPKMKYKGQYRPSDLLCPETYVWVPI 438
Query: 494 DIARPLLDRKPY 505
+ P L+ Y
Sbjct: 439 EQCLPSLENSKY 450
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Query: 35 CGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRA 94
CGYCK+ S ++G+WA+S+TV DYQDL+DRGWRRSG ++YKP M +TCCP YTIR R
Sbjct: 23 CGYCKNES-GSRSNGMWAHSMTVQDYQDLIDRGWRRSGKYVYKPVMNQTCCPQYTIRCRP 81
Query: 95 SDFAPSKEQRRVSRRMQRFLDGTVDVEKKSVE 126
F PSK ++V ++M +FL +V K S E
Sbjct: 82 LQFQPSKSHKKVLKKMLKFL-AKGEVPKGSCE 112
>sp|Q9Z2A5|ATE1_MOUSE Arginyl-tRNA--protein transferase 1 OS=Mus musculus GN=Ate1 PE=1
SV=2
Length = 516
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 131/203 (64%), Gaps = 11/203 (5%)
Query: 323 PQAKRHKLQIRLKRSSFDPQEF--------ELYRRYQIKVHNDKPDQVTETSYRRFLVDS 374
P+ HKL++R+ RSS +F ++Y+RYQ+ VH D PD+ T + + RFL S
Sbjct: 261 PENASHKLEVRVVRSSPPSPQFRATFQESYQVYKRYQMVVHKDPPDKPTVSQFTRFLCSS 320
Query: 375 PLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSL 434
PL P+ P CG+GSFHQQY +D +++AVGV+DILP C+SS YL++DPDY+FLSL
Sbjct: 321 PLEAEHPADG---PECGYGSFHQQYWLDGKIIAVGVLDILPYCVSSVYLYYDPDYSFLSL 377
Query: 435 GKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYD 494
G YSAL+EI++ ++ L YYY+G+YIHSC KMRYK Y PS+LLCP Y WVP +
Sbjct: 378 GVYSALREIAFTRQLHEKTSQLSYYYMGFYIHSCPKMRYKGQYRPSDLLCPETYVWVPIE 437
Query: 495 IARPLLDRKPYVVLSDFASLQNE 517
P LD Y + ++E
Sbjct: 438 QCLPSLDNSKYCRFNQDPEAEDE 460
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 29 GTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSY 88
G CGYCK+ S ++G+WA+S+TV DYQDL+DRGWRRSG ++YKP M++TCCP Y
Sbjct: 17 GQTSFQCGYCKNK-LGSRSYGMWAHSMTVQDYQDLIDRGWRRSGKYVYKPVMDQTCCPQY 75
Query: 89 TIRLRASDFAPSKEQRRVSRRMQRFL 114
TIR F PSK ++V ++M +FL
Sbjct: 76 TIRCHPLQFQPSKSHKKVLKKMLKFL 101
>sp|Q2PFX0|ATE1_MACFA Arginyl-tRNA--protein transferase 1 OS=Macaca fascicularis GN=ATE1
PE=2 SV=1
Length = 518
Score = 192 bits (487), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 127/192 (66%), Gaps = 13/192 (6%)
Query: 323 PQAKRHKLQIRLKRSSF-DPQEFE-------LYRRYQIKVHNDKPDQVTETSYRRFLVDS 374
P+ HKL++RL +SF DP+ LY +YQ+ +H D PD+ +T + RFL S
Sbjct: 263 PENASHKLEVRLVPASFEDPEFKSSFSQSFSLYVKYQVAIHQDLPDECGKTEFTRFLCSS 322
Query: 375 PL-VFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLS 433
PL PP+G D CG+GSFHQQY +D +++AVGVIDILP +SS YL++DPDY+FLS
Sbjct: 323 PLEAETPPNGPD----CGYGSFHQQYWLDGKIIAVGVIDILPNYVSSVYLYYDPDYSFLS 378
Query: 434 LGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPY 493
LG YSAL+EI++ ++ L YYY+G+YIHSC KM+YK Y PS+LLCP Y WVP
Sbjct: 379 LGVYSALREIAFTRQLHEKTSQLSYYYMGFYIHSCPKMKYKGQYRPSDLLCPETYVWVPI 438
Query: 494 DIARPLLDRKPY 505
+ P L+ Y
Sbjct: 439 EQCLPSLENSKY 450
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 88/150 (58%), Gaps = 18/150 (12%)
Query: 35 CGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRA 94
CGYCK+ S ++G+WA+S+TV DYQDL+DRGWRRSG ++YKP M +TCCP YTIR R
Sbjct: 23 CGYCKNES-GSRSNGMWAHSMTVQDYQDLIDRGWRRSGKYVYKPVMNQTCCPQYTIRCRP 81
Query: 95 SDFAPSKEQRRVSRRMQRFLDGTVDVEKKSVELIKDPSTSN---------CNKVSSSVEN 145
F PSK ++V ++M +FL +V K S E ST + NK+ +
Sbjct: 82 LQFQPSKSHKKVLKKMLKFL-AKGEVPKGSCEDEPMDSTMDDAVAGDFALINKLDIQCDL 140
Query: 146 NSLSHNNEE-------NNKEEEILQFLSGQ 168
+LS + +E N+K+EE + L Q
Sbjct: 141 KTLSDDVKESLQSEGKNSKKEEPHELLQSQ 170
>sp|O96539|ATE1_DROME Arginyl-tRNA--protein transferase 1 OS=Drosophila melanogaster
GN=Ate1 PE=2 SV=3
Length = 484
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 124/194 (63%), Gaps = 12/194 (6%)
Query: 324 QAKRHKLQIRLKRSSFD------PQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLV 377
+ +H+L++RL D PQ F LY++YQI +HND P + +Y+ L +PL
Sbjct: 231 ETNKHRLKLRLIHVYDDEFRRTLPQSFALYKKYQISIHNDPPKD--QDAYKEHLQATPLQ 288
Query: 378 FVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKY 437
P P G+GSFHQQY +DD+L+AVGVIDILP C+SS Y F+DPDY+FLSLG Y
Sbjct: 289 NEKPWDG---PEMGYGSFHQQYWLDDKLIAVGVIDILPGCVSSVYFFYDPDYSFLSLGTY 345
Query: 438 SALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPY-DIA 496
+L+EI V+ P+L+YYY+G+YIHSC KMRYK PS LLCP Y+W+P D+
Sbjct: 346 GSLREIELVQSLAEKVPSLKYYYMGFYIHSCPKMRYKGKLSPSYLLCPETYEWLPLTDVI 405
Query: 497 RPLLDRKPYVVLSD 510
R LD Y L++
Sbjct: 406 RAKLDEHKYQRLNE 419
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Query: 23 TVVGDCGTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDMER 82
++V G+ +S CGYC + S++HG+ AY + DYQDL+DRGWRR G + YK +
Sbjct: 4 SIVSYYGSQQSKCGYC-AGANCSLSHGMHAYQLDCRDYQDLIDRGWRRCGYYCYKLRNQE 62
Query: 83 TCCPSYTIRLRASDFAPSKEQRRVSRRMQRFL-DG 116
TCCP YTI+ +F SK +R+ RR+ RFL DG
Sbjct: 63 TCCPCYTIKCNGLEFKLSKSNKRILRRINRFLRDG 97
>sp|Q55EI0|ATE1_DICDI Arginyl-tRNA--protein transferase 1 OS=Dictyostelium discoideum
GN=ate1 PE=3 SV=1
Length = 629
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 86/118 (72%)
Query: 383 GDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQE 442
G+ P G+GSFHQ Y +D +LV VGVIDILP CLSS Y F+DPD+ FLSLGKYSAL E
Sbjct: 431 GEIKTPKPGYGSFHQYYRLDGKLVGVGVIDILPECLSSVYFFYDPDFNFLSLGKYSALNE 490
Query: 443 ISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYDIARPLL 500
I WV++ P L+YYY+GYYIHSC+KM+YKA Y PS+LLC ++WV + A L
Sbjct: 491 IEWVQKVSQSIPQLKYYYMGYYIHSCQKMKYKANYQPSQLLCLETFKWVEFKKAISFL 548
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 189/404 (46%), Gaps = 60/404 (14%)
Query: 1 MKKSKMRSEASSSSNNSNRKGETVVGDCGTCRSSCGYCKSS--GRTSITHGLWAYSVTVD 58
M++ M+S S+SS ++ G+ SSC YC + + I +G+ A +T +
Sbjct: 1 MERFLMQSSLSTSS---------LIYPHGSYDSSCNYCDAGEDKKGRICYGMVADQLTCE 51
Query: 59 DYQDLLDRGWRRSGSFLYKPDM--ERTCCPSYTIRLRASDFAPSKEQRRVSRRMQRFLDG 116
DYQ L+D+GWRRSG+FLYKP+ ++TCCP YTIRL S F PSK+ + ++ ++
Sbjct: 52 DYQLLIDQGWRRSGTFLYKPNNSDKKTCCPQYTIRLDTSSFKPSKDNKSTIKKFNNYILN 111
Query: 117 TVDVEKKSVELIKDPSTSNCNKVSSSVENNSLSHNNEENNKEEEILQFLSGQIDNAVQLC 176
+ EK S +TS + ++ + S + NN +E I+ +++N +
Sbjct: 112 NIIKEKDS------STTSTTKDIINTTQIKSNTKNNNNKTNDENII-----KLNNDIIEI 160
Query: 177 IVRGQFLSGIQLPKASVKKVSQAKRKLLVEGME-----NLLYTSNIAFQLAATL---NRA 228
I+ +F++ K ++ +K+L E ++ N + ++ L+ + R+
Sbjct: 161 ILNNEFIN----------KFNEQDKKILKENLKIKINSNKMIKETGSYSLSFGIFNKYRS 210
Query: 229 QLAEKDVQQIRVFGQSIEDTGPSPKIIAAKLASSLIQLAETSGLSIRACNGHLNFYSAMK 288
+L + + ++ +I + + + +S Q G N H+NF
Sbjct: 211 ELNQHSITIDQIINFTILEFNKT-------INNSDYQFNLEKGQ-----NNHINFKMINS 258
Query: 289 QASLDEDVHIGT--VSKESAKTCESKGGCLKNSSEHPQAKRHKLQIRLKRSSFDPQEFEL 346
L++ T + S K + ++ +HK +I + + + F L
Sbjct: 259 SQILNDSTKTKTLNIQNNSNKNSTTTATTATTTTTTTNEPKHKFEISIHKPKCTDEVFSL 318
Query: 347 YRRYQIKVHNDKPDQVTETSYRRFLVDSPLV-FVPP--SGDDTV 387
Y +YQ +H + D+ T++ ++RFLVDSPL+ + P S DD V
Sbjct: 319 YCKYQKIIHKE-DDEKTKSGFKRFLVDSPLIPIIHPDESYDDYV 361
>sp|O14133|ATE1_SCHPO Arginyl-tRNA--protein transferase 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC3C7.07c PE=3 SV=3
Length = 391
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 133/234 (56%), Gaps = 38/234 (16%)
Query: 329 KLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDTVP 388
K + ++ ++ ++FE++++YQ++VH +K +++T+ + RFL +SPL + D +
Sbjct: 126 KYSVTMEPCTYTDEKFEVFKKYQMQVHLEKEEEITKKGFSRFLCNSPLF----NEDKGIK 181
Query: 389 PCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKE 448
+GS+HQ Y RLVAVGV+D+LP +SS YLF+DPD + SLG+ SA +EI W+
Sbjct: 182 ---YGSYHQMYRFQGRLVAVGVLDLLPHGVSSVYLFYDPDMSKFSLGRISACREI-WL-- 235
Query: 449 NQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYDIARPLLDRKPYVVL 508
C YY+GYYIH+C KM+YKA Y PS LL P +W+P +
Sbjct: 236 -ALECGYRY-YYMGYYIHTCPKMKYKATYSPSYLLNPGTNKWIP---------------I 278
Query: 509 SDFASLQNESSPCISENVMGCQHDDIGQGDSNDVRMDYDYDDEMLDPESESDDD 562
+F SL N +P ++ G +++D++ DYD + S+++DD
Sbjct: 279 ENFTSLWNTGAP---------KYISFGDENNSDIQTAVDYDSS--EDSSQNEDD 321
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 33 SSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRL 92
+ CGYCKS GR + GL A ++ +DYQ L+D GWRRSG +LYKP+ + +CC YTIRL
Sbjct: 15 TECGYCKS-GRKTEHFGLLAEKLSCEDYQRLIDLGWRRSGHYLYKPNGKTSCCSLYTIRL 73
Query: 93 RASDFAPSKEQRRVSRRMQRFLDG 116
+ +F +KEQ++ ++ ++++G
Sbjct: 74 DSYNFKIAKEQKKAIKKWVKYVNG 97
>sp|P16639|ATE1_YEAST Arginyl-tRNA--protein transferase 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ATE1 PE=1 SV=2
Length = 503
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 103/194 (53%), Gaps = 26/194 (13%)
Query: 333 RLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDT------ 386
R + + + +++ L+ +YQ KVH D + + S++RFL D+P F P + T
Sbjct: 156 RFEPALYSEEKYHLFVKYQEKVHQDYNN--SPKSFKRFLCDTP--FGPEAVLGTQESWEQ 211
Query: 387 ------VPPC----GFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGK 436
+ P G H+ Y + +L+A+ V DILP +SS Y WDPDY+ SLGK
Sbjct: 212 LNNWQRMKPGEKLKHMGPVHECYYYEGKLIAITVSDILPSGISSVYFIWDPDYSKWSLGK 271
Query: 437 YSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYDIA 496
SAL++++ ++ LQYYYLGYYI C KM YKA Y +E+L +++P
Sbjct: 272 LSALRDLAIIQRTN-----LQYYYLGYYIEDCPKMNYKANYG-AEVLDVCHSKYIPLKPI 325
Query: 497 RPLLDRKPYVVLSD 510
+ ++ R V+ +
Sbjct: 326 QDMISRGKLFVIGE 339
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 47 THGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRR- 105
T G + + V Y + + G+RRSG FLYK D R CC YTIR + +KE ++
Sbjct: 57 TIGSFVEHMDVATYDRMCNMGFRRSGKFLYKVDPLRNCCRLYTIRTAPQELNMTKELKKC 116
Query: 106 VSRRMQR 112
+SR R
Sbjct: 117 ISRFATR 123
>sp|Q9I0M0|ATE_PSEAE Putative arginyl-tRNA--protein transferase OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=ate PE=3 SV=1
Length = 235
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 83/170 (48%), Gaps = 36/170 (21%)
Query: 329 KLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDT-- 386
+LQ+ KR SF+ + ++LYRRY + H D PPS D
Sbjct: 92 ELQVIRKRPSFNEEYYDLYRRYIEQRHADGD------------------MYPPSRDQFAT 133
Query: 387 -----VPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQ 441
+P C F F + RL+A+ V D+LP LS+ Y F+DPD SLG+Y+ L
Sbjct: 134 FLVRDLPFCCFFEFR----LHGRLLAIAVTDVLPNGLSAVYTFYDPDEEQRSLGRYAILW 189
Query: 442 EISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 491
+I+ +T LQ YLGY+I +CRKM YK Y P EL R WV
Sbjct: 190 QIA-----ETERLGLQAVYLGYWIKNCRKMNYKTQYRPIELFVNQR--WV 232
Score = 40.8 bits (94), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 60 YQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRR 109
Y L + G+RRSG LY+P + C R+ +DF+P+++QRR+ +R
Sbjct: 41 YASLSEVGFRRSGDHLYRPHCQH-CTACIAARIPVADFSPNRQQRRILKR 89
>sp|Q02NB0|ATE_PSEAB Putative arginyl-tRNA--protein transferase OS=Pseudomonas
aeruginosa (strain UCBPP-PA14) GN=ate PE=3 SV=1
Length = 235
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 83/170 (48%), Gaps = 36/170 (21%)
Query: 329 KLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDT-- 386
+LQ+ KR SF+ + ++LYRRY + H D PPS D
Sbjct: 92 ELQVIRKRPSFNEEYYDLYRRYIEQRHADGD------------------MYPPSRDQFAT 133
Query: 387 -----VPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQ 441
+P C F F + RL+A+ V D+LP LS+ Y F+DPD SLG+Y+ L
Sbjct: 134 FLVRDLPFCCFFEFR----LHGRLLAIAVTDVLPNGLSAVYTFYDPDEEQRSLGRYAILW 189
Query: 442 EISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 491
+I+ +T LQ YLGY+I +CRKM YK Y P EL R WV
Sbjct: 190 QIA-----ETERLGLQAVYLGYWIKNCRKMNYKTQYRPIELFVNQR--WV 232
Score = 40.8 bits (94), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 60 YQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRR 109
Y L + G+RRSG LY+P + C R+ +DF+P+++QRR+ +R
Sbjct: 41 YASLSEVGFRRSGDHLYRPHCQH-CTACIAARIPVADFSPNRQQRRILKR 89
>sp|B7UV23|ATE_PSEA8 Putative arginyl-tRNA--protein transferase OS=Pseudomonas
aeruginosa (strain LESB58) GN=ate PE=3 SV=1
Length = 235
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 83/170 (48%), Gaps = 36/170 (21%)
Query: 329 KLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDT-- 386
+LQ+ KR SF+ + ++LYRRY + H D PPS D
Sbjct: 92 ELQVIRKRPSFNEEYYDLYRRYIEQRHADGD------------------MYPPSRDQFAT 133
Query: 387 -----VPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQ 441
+P C F F + RL+A+ V D+LP LS+ Y F+DPD SLG+Y+ L
Sbjct: 134 FLVRDLPFCCFFEFR----LHGRLLAIAVTDVLPNGLSAVYTFYDPDEEQRSLGRYAILW 189
Query: 442 EISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 491
+I+ +T LQ YLGY+I +CRKM YK Y P EL R WV
Sbjct: 190 QIA-----ETERLGLQAVYLGYWIKNCRKMNYKTQYRPIELFVNQR--WV 232
Score = 40.8 bits (94), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 60 YQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRR 109
Y L + G+RRSG LY+P + C R+ +DF+P+++QRR+ +R
Sbjct: 41 YASLSEVGFRRSGDHLYRPHCQH-CTACIAARIPVADFSPNRQQRRILKR 89
>sp|A6V4G8|ATE_PSEA7 Putative arginyl-tRNA--protein transferase OS=Pseudomonas
aeruginosa (strain PA7) GN=ate PE=3 SV=1
Length = 235
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 83/170 (48%), Gaps = 36/170 (21%)
Query: 329 KLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDT-- 386
+LQ+ KR SF+ + ++LYRRY + H D PPS D
Sbjct: 92 ELQVIRKRPSFNEEYYDLYRRYIEQRHADGD------------------MYPPSRDQFAT 133
Query: 387 -----VPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQ 441
+P C F F + RL+A+ V D+LP LS+ Y F+DPD SLG+Y+ L
Sbjct: 134 FLVRDLPFCCFFEFR----LHGRLLAIAVTDVLPNGLSAVYTFYDPDEEQRSLGRYAILW 189
Query: 442 EISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 491
+I+ +T LQ YLGY+I +CRKM YK Y P EL R WV
Sbjct: 190 QIA-----ETERLGLQAVYLGYWIKNCRKMNYKTQYRPIELFVNQR--WV 232
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 60 YQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRR 109
Y L + G+RRSG LY+P + C R+ + F+P+++QRR+ +R
Sbjct: 41 YASLSEVGFRRSGDHLYRPHCQH-CTACIAARIPVAGFSPNRQQRRILKR 89
>sp|Q48H68|ATE_PSE14 Putative arginyl-tRNA--protein transferase OS=Pseudomonas syringae
pv. phaseolicola (strain 1448A / Race 6) GN=ate PE=3
SV=1
Length = 235
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 83/166 (50%), Gaps = 30/166 (18%)
Query: 330 LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDD---- 385
+Q++ R +F + F+LY+RY + H D PPS +
Sbjct: 93 VQVQSARPAFTEEYFDLYQRYIEQRHADGD------------------MFPPSREQFSTF 134
Query: 386 TVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISW 445
V F F++ + +D RL+AV V D+LP LS+ Y F++PD SLG+Y+ L +I+
Sbjct: 135 LVRDLPFSRFYE-FRVDQRLLAVAVTDLLPNGLSAVYTFYEPDEERRSLGRYAILWQIAE 193
Query: 446 VKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 491
Q LQ YLGY+I +C+KM YK Y P ELL R WV
Sbjct: 194 AARLQ-----LQAVYLGYWIKNCKKMNYKTQYRPIELLTNQR--WV 232
Score = 39.7 bits (91), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 57 VDDYQDLLDRGWRRSGSFLYKPDMER--TCCPSYTIRLRASDFAPSKEQRRVSRR 109
V Y DL D G+RRSG LY+P + C P+ R+ + F P ++Q+R+ +R
Sbjct: 38 VQVYADLSDMGFRRSGDHLYRPHCQNCSACVPA---RIPVNLFVPDRQQKRILKR 89
>sp|A7H303|ATE_CAMJD Putative arginyl-tRNA--protein transferase OS=Campylobacter jejuni
subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97)
GN=ate PE=3 SV=1
Length = 239
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 7/95 (7%)
Query: 391 GFGSFHQQ--YLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKE 448
GF +F + + I+D+LV V +IDIL +SS Y F+DPD+++ SLGK+S L EI K+
Sbjct: 135 GFMNFGYELAFYIEDKLVCVDLIDILEDGISSIYCFYDPDFSYFSLGKFSLLNEIQIAKK 194
Query: 449 NQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELL 483
L Y YLGY++ C+ + YKA Y PSE+L
Sbjct: 195 -----MNLDYIYLGYFVKKCQSLSYKADYTPSEIL 224
>sp|Q4ZRK9|ATE_PSEU2 Putative arginyl-tRNA--protein transferase OS=Pseudomonas syringae
pv. syringae (strain B728a) GN=ate PE=3 SV=1
Length = 235
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 32/167 (19%)
Query: 330 LQIRLKRSSFDPQEFELYRRYQIKVHND----KPDQVTETSYRRFLV-DSPLVFVPPSGD 384
+Q++ + +F + F+LY+RY + H D P Q + FLV D P
Sbjct: 93 IQVQSAKPAFTQEYFDLYQRYIEQRHADGDMFPPSQ---EQFSTFLVRDLP--------- 140
Query: 385 DTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEIS 444
F F++ + +D RL+AV V D+LP LS+ Y F++PD SLG+Y+ L +I+
Sbjct: 141 -------FSRFYE-FRVDQRLLAVAVTDLLPNGLSAVYTFYEPDEERRSLGRYAILWQIA 192
Query: 445 WVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 491
Q LQ YLGY+I +C+KM YK Y P ELL R WV
Sbjct: 193 EAARLQ-----LQAVYLGYWIKNCKKMNYKTQYRPIELLTNQR--WV 232
Score = 40.0 bits (92), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 12/72 (16%)
Query: 57 VDDYQDLLDRGWRRSGSFLYKPDMER--TCCPSYTIRLRASDFAPSKEQRRVSRRMQRFL 114
V Y DL D G+RRSG LY+P + C P+ R+ + F P ++Q+R+ +R
Sbjct: 38 VQVYADLSDMGFRRSGDHLYRPHCQNCSACVPA---RIPVNLFIPDRQQKRILKR----- 89
Query: 115 DGTVDVEKKSVE 126
VD++ +S +
Sbjct: 90 --NVDIQVQSAK 99
>sp|A1W023|ATE_CAMJJ Putative arginyl-tRNA--protein transferase OS=Campylobacter jejuni
subsp. jejuni serotype O:23/36 (strain 81-176) GN=ate
PE=3 SV=1
Length = 239
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 7/95 (7%)
Query: 391 GFGSFHQQ--YLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKE 448
GF +F + + I+D+LV V +IDIL +SS Y F+DPD+++ SLGK+S L EI K+
Sbjct: 135 GFMNFGYELAFYIEDKLVCVDLIDILEDGISSIYCFYDPDFSYFSLGKFSLLNEIQIAKK 194
Query: 449 NQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELL 483
L Y YLGY++ C+ + YKA Y P+E+L
Sbjct: 195 -----MNLDYIYLGYFVKKCQSLSYKADYTPNEIL 224
>sp|Q5HU66|ATE_CAMJR Putative arginyl-tRNA--protein transferase OS=Campylobacter jejuni
(strain RM1221) GN=ate PE=3 SV=1
Length = 239
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 7/95 (7%)
Query: 391 GFGSFHQQ--YLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKE 448
GF +F + + I+D+LV V +IDIL +SS Y F+DPD+++ SLGK+S L EI K+
Sbjct: 135 GFMNFGYELAFYIEDKLVCVDLIDILEDGISSIYCFYDPDFSYFSLGKFSLLNEIQIAKK 194
Query: 449 NQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELL 483
L Y YLGY++ C+ + YKA Y P+E+L
Sbjct: 195 -----MNLDYIYLGYFVKKCQSLSYKADYTPNEIL 224
>sp|A8FM84|ATE_CAMJ8 Putative arginyl-tRNA--protein transferase OS=Campylobacter jejuni
subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828)
GN=ate PE=3 SV=1
Length = 239
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 7/95 (7%)
Query: 391 GFGSFHQQ--YLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKE 448
GF +F + + I+D+LV V +IDIL +SS Y F+DPD+++ SLGK+S L EI K+
Sbjct: 135 GFMNFGYELAFYIEDKLVCVDLIDILEDGISSIYCFYDPDFSYFSLGKFSLLNEIQIAKK 194
Query: 449 NQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELL 483
L Y YLGY++ C+ + YKA Y P+E+L
Sbjct: 195 -----MNLDYIYLGYFVKKCQSLSYKADYTPNEIL 224
>sp|Q9PNQ6|ATE_CAMJE Putative arginyl-tRNA--protein transferase OS=Campylobacter jejuni
subsp. jejuni serotype O:2 (strain NCTC 11168) GN=ate
PE=3 SV=1
Length = 239
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 7/95 (7%)
Query: 391 GFGSFHQQ--YLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKE 448
GF +F + + I+D+LV V +IDIL +SS Y F+DPD+++ SLGK+S L EI K+
Sbjct: 135 GFMNFGYELAFYIEDKLVCVDLIDILEDGISSIYCFYDPDFSYFSLGKFSLLNEIQIAKK 194
Query: 449 NQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELL 483
L Y YLGY++ C+ + YKA Y P+E+L
Sbjct: 195 -----MNLDYIYLGYFVKKCQSLSYKADYTPNEIL 224
>sp|Q88FS6|ATE_PSEPK Putative arginyl-tRNA--protein transferase OS=Pseudomonas putida
(strain KT2440) GN=ate PE=3 SV=1
Length = 235
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 83/170 (48%), Gaps = 38/170 (22%)
Query: 330 LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDT--- 386
L + R +F + FELYRRY H D PPS D
Sbjct: 93 LTVTAARPAFKEEYFELYRRYIETRHADGD------------------MYPPSRDQFSTF 134
Query: 387 ----VPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQE 442
+P C F F ++ RL+AV V D+LP LS+ Y F++PD SLG+++ L +
Sbjct: 135 LVRDLPFCWFYEFR----LEGRLMAVAVCDLLPNGLSAVYTFYEPDEERRSLGRFAILWQ 190
Query: 443 IS-WVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 491
I+ +++N L+ YLGY+I +C+KM YK Y P ELL + +WV
Sbjct: 191 ITEALRQN------LEAVYLGYWIKNCKKMNYKTQYRPIELL--INQRWV 232
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 57 VDDYQDLLDRGWRRSGSFLYKPDME--RTCCPSYTIRLRASDFAPSKEQRRVSRR 109
V Y DL + G+RRSG LY+P + C P+ R+ A+ F P+++QRR+ +R
Sbjct: 38 VHVYADLSEMGFRRSGDHLYRPHCQNCNACVPA---RIPAARFIPNRQQRRILKR 89
>sp|A5W1H0|ATE_PSEP1 Putative arginyl-tRNA--protein transferase OS=Pseudomonas putida
(strain F1 / ATCC 700007) GN=ate PE=3 SV=1
Length = 235
Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 83/170 (48%), Gaps = 38/170 (22%)
Query: 330 LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDT--- 386
L + R +F + FELYRRY H D PPS D
Sbjct: 93 LTVTAARPAFKEEYFELYRRYIETRHADGD------------------MYPPSRDQFSTF 134
Query: 387 ----VPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQE 442
+P C F F ++ RL+AV V D+LP LS+ Y F++PD SLG+++ L +
Sbjct: 135 LVRDLPFCWFYEFR----LEGRLMAVAVCDLLPNGLSAVYTFYEPDEDRRSLGRFAILWQ 190
Query: 443 IS-WVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 491
I+ +++N L+ YLGY+I +C+KM YK Y P ELL + +WV
Sbjct: 191 ITEALRQN------LEAVYLGYWIKNCKKMNYKTQYRPIELL--INQRWV 232
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 57 VDDYQDLLDRGWRRSGSFLYKPDME--RTCCPSYTIRLRASDFAPSKEQRRVSRR 109
V Y DL + G+RRSG LY+P + C P+ R+ A+ F P+++QRR+ +R
Sbjct: 38 VHVYADLSEMGFRRSGDHLYRPHCQNCNACVPA---RIPAARFIPNRQQRRILKR 89
>sp|A4VLV4|ATE_PSEU5 Putative arginyl-tRNA--protein transferase OS=Pseudomonas stutzeri
(strain A1501) GN=ate PE=3 SV=1
Length = 235
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 82/165 (49%), Gaps = 28/165 (16%)
Query: 330 LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQV--TETSYRRFLV-DSPLVFVPPSGDDT 386
LQ+R R +F + + LY Y K H D D + + FLV D P
Sbjct: 93 LQVRGVRPAFSEELYALYANYIEKRHADG-DMYPPSREQFNTFLVRDLP----------- 140
Query: 387 VPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWV 446
F F++ + +D RL+AV V D+LP LS+ Y F+DPD SLG+Y+ L ++
Sbjct: 141 -----FSRFYE-FRLDGRLLAVAVTDVLPNGLSAVYTFYDPDEERRSLGRYAILWQM--- 191
Query: 447 KENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 491
+ L+ YLGY+I +CRKM YK Y P ELL R WV
Sbjct: 192 --GEAARLGLKAVYLGYWIKNCRKMNYKTEYRPIELLVNQR--WV 232
Score = 32.7 bits (73), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 57 VDDYQDLLDRGWRRSGSFLYKPDMER--TCCPSYTIRLRASDFAPSKEQRRVSRR 109
V Y +L + G+RRSG LY+P +R C P+ I + A + S++Q+R+ +R
Sbjct: 38 VQVYAELSEMGFRRSGDHLYRPHCQRCSACIPA-RIPVNAPEL--SRQQKRILKR 89
>sp|Q87ZS3|ATE_PSESM Putative arginyl-tRNA--protein transferase OS=Pseudomonas syringae
pv. tomato (strain DC3000) GN=ate PE=3 SV=1
Length = 235
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 80/166 (48%), Gaps = 30/166 (18%)
Query: 330 LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDD---- 385
+Q+ + F + F+LY+RY + H D PPS +
Sbjct: 93 IQVSSAKPVFTQEYFDLYQRYIEQRHADGD------------------MFPPSREQFSTF 134
Query: 386 TVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISW 445
V F F++ + +D RL+AV V D+LP LS+ Y F++PD SLG+Y+ L +I
Sbjct: 135 LVRDLPFSRFYE-FRVDQRLLAVAVTDLLPNGLSAVYTFYEPDEERRSLGRYAILWQIGE 193
Query: 446 VKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 491
Q LQ YLGY+I +C+KM YK Y P ELL R WV
Sbjct: 194 ATRLQ-----LQAVYLGYWIKNCKKMNYKTQYRPIELLTNQR--WV 232
Score = 40.0 bits (92), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 57 VDDYQDLLDRGWRRSGSFLYKPDMER--TCCPSYTIRLRASDFAPSKEQRRVSRR 109
V Y DL D G+RRSG LY+P + C P+ R+ + F P ++Q+R+ +R
Sbjct: 38 VQVYADLSDMGFRRSGDHLYRPHCQNCSACVPA---RIPVNLFVPDRQQKRILKR 89
>sp|Q3KA78|ATE_PSEPF Putative arginyl-tRNA--protein transferase OS=Pseudomonas
fluorescens (strain Pf0-1) GN=ate PE=3 SV=1
Length = 235
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 82/166 (49%), Gaps = 30/166 (18%)
Query: 330 LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDD---- 385
LQ+R + +F + F+LY+RY + H D PPS D
Sbjct: 93 LQVRPVKPAFSEEYFDLYQRYIEQRHADGD------------------MYPPSRDQFSTF 134
Query: 386 TVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISW 445
V F F++ + +D RL+AV V D+LP LS+ Y F++P SLG+Y+ L +I+
Sbjct: 135 LVRDLPFSRFYE-FRLDGRLLAVAVTDLLPNGLSAVYTFYEPQEERRSLGRYAILWQIA- 192
Query: 446 VKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 491
+ L+ YLGY+I +C+KM YK Y P ELL R WV
Sbjct: 193 ----EAQRLGLEAVYLGYWIKNCKKMNYKTQYRPIELLINQR--WV 232
Score = 40.0 bits (92), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 13/100 (13%)
Query: 29 GTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDME--RTCCP 86
T SC Y T++ + + V Y DL + G+RRSG LY+P + C P
Sbjct: 11 ATQPHSCSYLPEEQATTLFLDP-SQPMDVHVYADLSEMGFRRSGDHLYRPHCQNCNACVP 69
Query: 87 SYTIRLRASDFAPSKEQRRVSRRMQRFLDGTVDVEKKSVE 126
+ R+ + F P+++Q+R+ +R VD++ + V+
Sbjct: 70 A---RIPVAQFNPNRQQKRIFKR-------NVDLQVRPVK 99
>sp|Q1IBD6|ATE_PSEE4 Putative arginyl-tRNA--protein transferase OS=Pseudomonas
entomophila (strain L48) GN=ate PE=3 SV=1
Length = 235
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 82/170 (48%), Gaps = 38/170 (22%)
Query: 330 LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDT--- 386
L + R F + F+LYRRY + H D PPS D
Sbjct: 93 LTVSAVRPVFKEEYFDLYRRYIEQRHADGD------------------MYPPSRDQFSTF 134
Query: 387 ----VPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQE 442
+P C F F ++ RL+AV V D+LP LS+ Y F++PD SLG+Y+ L +
Sbjct: 135 LVRDLPFCWFYEFR----LEGRLMAVAVCDLLPNGLSAVYTFYEPDEERRSLGRYAILWQ 190
Query: 443 IS-WVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 491
I+ +++N L YLGY+I +C+KM YK Y P ELL + +WV
Sbjct: 191 ITEALRQN------LDAVYLGYWIKNCKKMNYKTQYRPIELL--INQRWV 232
Score = 40.4 bits (93), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 57 VDDYQDLLDRGWRRSGSFLYKPDME--RTCCPSYTIRLRASDFAPSKEQRRVSRR 109
V Y DL + G+RRSG LY+P + C P+ R+ A F P+++QRR+ +R
Sbjct: 38 VHVYADLSEMGFRRSGDHLYRPHCQNCNACVPA---RIPAVRFIPNRQQRRILKR 89
>sp|B0KLX4|ATE_PSEPG Putative arginyl-tRNA--protein transferase OS=Pseudomonas putida
(strain GB-1) GN=ate PE=3 SV=1
Length = 235
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 78/169 (46%), Gaps = 36/169 (21%)
Query: 330 LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDT--- 386
L + R +F + FELYRRY H D PPS D
Sbjct: 93 LTVTAARPAFKEEYFELYRRYIETRHADGD------------------MYPPSRDQFSTF 134
Query: 387 ----VPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQE 442
+P C F F ++ L+AV V D+LP LS+ Y F++PD SLG+++ L +
Sbjct: 135 LVRDLPFCWFYEFR----LEGHLMAVAVCDLLPNGLSAVYTFYEPDEERRSLGRFAILWQ 190
Query: 443 ISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 491
I+ L+ YLGY+I +C+KM YK Y P ELL + +WV
Sbjct: 191 ITEALRQD-----LEAVYLGYWIKNCKKMNYKTQYRPIELL--INQRWV 232
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 57 VDDYQDLLDRGWRRSGSFLYKPDME--RTCCPSYTIRLRASDFAPSKEQRRVSRR 109
V+ Y DL + G+RRSG LY+P + C P+ R+ A+ F P+++QRR+ +R
Sbjct: 38 VNVYADLSEMGFRRSGDHLYRPHCQNCNACVPA---RIPAARFIPNRQQRRILKR 89
>sp|Q82ST4|ATE_NITEU Putative arginyl-tRNA--protein transferase OS=Nitrosomonas europaea
(strain ATCC 19718 / NBRC 14298) GN=ate PE=3 SV=1
Length = 238
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 88/182 (48%), Gaps = 34/182 (18%)
Query: 318 NSSEHPQAKRHK-LQIRLKRSSFDPQEFELYRRYQIKVHN----DKPDQVTETSYRRFL- 371
N ++ KRH+ LQI FDP F+LY+RYQ H D+ D+ YR FL
Sbjct: 77 NRTQRRIWKRHQHLQIAWHPLHFDPVHFDLYQRYQKSRHTNGSMDQDDENGRKQYRDFLL 136
Query: 372 ---VDSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPD 428
VDS LV +FH+ +++L V +ID LP LS Y F++PD
Sbjct: 137 KSTVDSFLV----------------TFHE----NEQLRMVSIIDRLPDGLSPVYTFFEPD 176
Query: 429 YAFLSLGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRY 488
S G ++ L + + Q L Y YLGY+I + RKM YKA + P + L ++
Sbjct: 177 VPGSSYGTFNILWQTA-----QCRADRLPYLYLGYWIANSRKMHYKANFQPLQYLIDNQW 231
Query: 489 QW 490
Q+
Sbjct: 232 QY 233
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 60 YQDLLDRGWRRSGSFLYKPDME--RTCCPSYTIRLRASDFAPSKEQRRVSRRMQ 111
Y L+ +G+RRSGS +Y+PD + C P +R+ F P++ QRR+ +R Q
Sbjct: 38 YAQLIQQGYRRSGSLIYRPDCDYCHACIP---VRIPVELFDPNRTQRRIWKRHQ 88
>sp|B1JBE6|ATE_PSEPW Putative arginyl-tRNA--protein transferase OS=Pseudomonas putida
(strain W619) GN=ate PE=3 SV=1
Length = 235
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 78/169 (46%), Gaps = 36/169 (21%)
Query: 330 LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDT--- 386
L + R +F + F+LYRRY H D PPS D
Sbjct: 93 LTVTAARPAFKEEYFDLYRRYIETRHADGD------------------MYPPSRDQFSTF 134
Query: 387 ----VPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQE 442
+P C F F + RL+AV V D+LP LS+ Y F++PD SLG+++ L +
Sbjct: 135 LVRDLPFCWFYEFR----LAGRLLAVAVCDLLPNGLSAVYTFYEPDEERRSLGRFAILWQ 190
Query: 443 ISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 491
I+ L+ YLGY+I +C+KM YK Y P ELL + +WV
Sbjct: 191 ITEALRQD-----LEAVYLGYWIKNCKKMNYKTQYRPIELL--INQRWV 232
Score = 41.6 bits (96), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 57 VDDYQDLLDRGWRRSGSFLYKPDME--RTCCPSYTIRLRASDFAPSKEQRRVSRR 109
V Y DL + G+RRSG LY+P + C P+ R+ A+ F P+++QRR+ +R
Sbjct: 38 VHVYADLSEMGFRRSGDHLYRPHCQNCNACVPA---RIPAARFIPNRQQRRILKR 89
>sp|Q4K9V0|ATE_PSEF5 Putative arginyl-tRNA--protein transferase OS=Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477) GN=ate PE=3
SV=1
Length = 235
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 79/166 (47%), Gaps = 30/166 (18%)
Query: 330 LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDD---- 385
L + + F + F+LY+RY + H D PPS D
Sbjct: 93 LTVHAAKPCFSEEYFDLYQRYIEQRHADGD------------------MFPPSRDQFSTF 134
Query: 386 TVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISW 445
V F F++ + +D RL+AV V D+LP LS+ Y F++PD SLG+++ L +I
Sbjct: 135 LVRDLPFSRFYE-FRLDGRLLAVAVTDLLPNGLSAVYTFYEPDEERRSLGRFAILWQI-- 191
Query: 446 VKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 491
+T L YLGY+I +C+KM YK Y P ELL R WV
Sbjct: 192 ---GETLRLGLDAVYLGYWIKNCKKMNYKTQYRPIELLVNQR--WV 232
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 57 VDDYQDLLDRGWRRSGSFLYKPDME--RTCCPSYTIRLRASDFAPSKEQRRVSRR 109
V Y DL + G+RRSG LY+P + C P+ R+ A+ F PS++Q+R+ +R
Sbjct: 38 VHVYADLSEMGFRRSGDHLYRPHCQNCNACVPA---RIPATQFLPSRQQKRIIKR 89
>sp|Q2SJK9|ATE_HAHCH Putative arginyl-tRNA--protein transferase OS=Hahella chejuensis
(strain KCTC 2396) GN=ate PE=3 SV=1
Length = 234
Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 85/173 (49%), Gaps = 22/173 (12%)
Query: 319 SSEHPQAKRHKLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVF 378
S E + L +RL+ + F+ + F LY+RY H D D T +D F
Sbjct: 82 SQERTWKRNSDLTVRLRSAQFEQEHFALYQRYISARHQDG-DMYPPT------LDQYESF 134
Query: 379 VPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYS 438
+ + +T+ F F + D +L+A+ V D LS+ Y F+DP+ +LG Y+
Sbjct: 135 LLEARSETL----FIEFRK----DSKLLAIAVTDRTTDGLSAIYTFFDPNEDKRALGVYA 186
Query: 439 ALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 491
L ++ + +E + L Y YLGY+I CRKM YK Y P ++L +R W+
Sbjct: 187 ILWQLQFAREQR-----LPYLYLGYWIRGCRKMSYKTNYRPIQVL--VRDSWI 232
>sp|C3JY60|ATE_PSEFS Putative arginyl-tRNA--protein transferase OS=Pseudomonas
fluorescens (strain SBW25) GN=ate PE=3 SV=1
Length = 235
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 78/166 (46%), Gaps = 30/166 (18%)
Query: 330 LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDD---- 385
L + + F + F+LY+RY + H D PPS D
Sbjct: 93 LTVMPAKPRFTEEYFDLYQRYIEERHADGD------------------MFPPSRDQFSTF 134
Query: 386 TVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISW 445
V F F++ + D RLVAV V D+LP LS+ Y F++P SLG+++ L +I
Sbjct: 135 LVRDLPFSRFYE-FRADGRLVAVAVTDLLPNGLSAVYTFYEPAEERRSLGRFAILWQIGE 193
Query: 446 VKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 491
+ L+ YLGY+I +C+KM YK Y P ELL + +WV
Sbjct: 194 ALRQE-----LEAVYLGYWIKNCKKMNYKTQYRPIELL--INQRWV 232
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 15/109 (13%)
Query: 29 GTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDME--RTCCP 86
T SC Y T++ + + V Y DL + G+RRSG LY+P + C P
Sbjct: 11 ATQPHSCSYLPDEQATTLFLDP-SQPMDVHVYADLSEMGFRRSGDHLYRPHCQNCNACVP 69
Query: 87 SYTIRLRASDFAPSKEQRRVSRR---------MQRFLDGTVDVEKKSVE 126
+ R+ + F P + Q+R+ +R RF + D+ ++ +E
Sbjct: 70 A---RIPVAQFLPDRNQKRILKRNADLTVMPAKPRFTEEYFDLYQRYIE 115
>sp|Q0BTF8|ATE_GRABC Putative arginyl-tRNA--protein transferase OS=Granulibacter
bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=ate
PE=3 SV=1
Length = 267
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 73/152 (48%), Gaps = 23/152 (15%)
Query: 342 QEFELYRRYQIKVHNDKP-DQVTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQYL 400
++F L++RYQ H D + T YR + D+P+ F Q
Sbjct: 109 EQFMLFQRYQKSRHGDGDMAAMGFTDYRAMVEDTPIQ------------TSILEFRDQ-- 154
Query: 401 IDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYYY 460
DD L+ + D L LS+ Y F+DPD SLG Y+ L ++ QT L Y Y
Sbjct: 155 -DDVLLCACLTDRLNDGLSAVYSFYDPDLPQRSLGSYAILSMVA-----QTKAEGLPYLY 208
Query: 461 LGYYIHSCRKMRYKAAYHPSELLCPLRYQWVP 492
LGY++ + RKM YK+AY P+E+L R W P
Sbjct: 209 LGYWVANSRKMAYKSAYQPAEILS--RGAWRP 238
>sp|Q7NX30|ATE_CHRVO Putative arginyl-tRNA--protein transferase OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=ate PE=3 SV=1
Length = 242
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 32/161 (19%)
Query: 338 SFDPQEFELYRRYQIKVH------NDKPDQVTETSYRRFLVDSPLVFVPPSGDDTVPPCG 391
+FD + + LYR YQ H +D Q +E F+ SG D
Sbjct: 106 AFDAEHYALYRWYQQTRHAGGGMSDDDAQQYSE-------------FILKSGVD------ 146
Query: 392 FGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQT 451
S ++ +D L V ++D L LS+ Y F+DP+ + SLG Y+ L ++ Q
Sbjct: 147 --SHLAEFRLDGELKMVSLVDRLVDGLSAVYTFYDPEDSQSSLGVYNVLWQV-----EQA 199
Query: 452 HCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVP 492
L Y YLGY+I CRKM YK+ Y P ++L R+Q +P
Sbjct: 200 RMLGLSYVYLGYWIADCRKMAYKSGYRPLQMLHGGRWQTMP 240
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 60 YQDLLDRGWRRSGSFLYKP--DMERTCCPSYTIRLRASDFAPSKEQRRVSRR----MQRF 113
Y L+ G+RRSG + Y+P D + C P +RL F P++ QR+V RR R+
Sbjct: 46 YSQLVRLGFRRSGLYTYRPYCDSCQACIP---VRLPVDQFRPNRTQRKVWRRGAGMSARW 102
Query: 114 LDGTVDVEKKSV 125
L D E ++
Sbjct: 103 LPLAFDAEHYAL 114
>sp|A4SNL5|ATE_AERS4 Putative arginyl-tRNA--protein transferase OS=Aeromonas salmonicida
(strain A449) GN=ate PE=3 SV=1
Length = 238
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 22/144 (15%)
Query: 341 PQEFELYRRYQIKVHNDKPD-QVTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQY 399
P+ ++LY RY + H+D + T Y+ FL D +PP + +
Sbjct: 103 PEYYQLYERYIRERHHDGSMYPPSRTQYKGFL-----------HCDWMPP-----LYLEM 146
Query: 400 LIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYY 459
D+RL+ V D+LP LS+ Y F+DP +A SLG ++ L ++ K +
Sbjct: 147 RKDNRLIGVATTDLLPHSLSAMYTFFDPAHADRSLGTFAILSQLDLAKRTGR-----TWL 201
Query: 460 YLGYYIHSCRKMRYKAAYHPSELL 483
YLGY + +CRKM YK Y P E L
Sbjct: 202 YLGYLVEACRKMNYKRQYLPHERL 225
Score = 37.7 bits (86), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 55 VTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRV 106
+ Y+ LL G+RRSG+ +Y+P C ++R+ + F PS+ Q+R+
Sbjct: 36 LNASGYERLLTAGFRRSGNDIYRPHCP-ACSACQSLRIHSERFVPSRSQKRI 86
>sp|C5BIJ7|ATE_TERTT Putative arginyl-tRNA--protein transferase OS=Teredinibacter
turnerae (strain ATCC 39867 / T7901) GN=ate PE=3 SV=1
Length = 243
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 75/161 (46%), Gaps = 24/161 (14%)
Query: 338 SFDPQE-FELYRRYQIKVHNDKPDQ-VTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSF 395
S D +E F LY RY + H+D +T YR FL G F
Sbjct: 100 SIDNEECFSLYERYINERHSDGDMYPADKTQYRDFLTSE---------------WGITRF 144
Query: 396 HQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPT 455
L+AV V+D L LS+ Y F+DPD SLG+++ L ++ K+ Q
Sbjct: 145 LLFRDAQQSLLAVAVVDRLENGLSAVYTFFDPDAEKRSLGRFAILYQLEQAKQQQ----- 199
Query: 456 LQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYDIA 496
L Y YLGY+I +C KM YK Y P ++L + WV D++
Sbjct: 200 LPYLYLGYWIRACTKMNYKTDYQPYQML--INQNWVNIDVS 238
Score = 37.0 bits (84), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Query: 60 YQDLLDRGWRRSGSFLYKPDME--RTCCPSYTIRLRASDFAPSKEQRR 105
Y +L G+RRSGS +Y+P E + C P IR+ A F P++ Q+R
Sbjct: 41 YSELSAYGFRRSGSHVYRPHCEQCQACIP---IRVCADSFTPNRSQKR 85
>sp|A0KJD9|ATE_AERHH Putative arginyl-tRNA--protein transferase OS=Aeromonas hydrophila
subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=ate
PE=3 SV=1
Length = 238
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 22/144 (15%)
Query: 341 PQEFELYRRYQIKVHNDKPD-QVTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQY 399
P+ ++LY RY + H+D + T Y+ FL D +PP + +
Sbjct: 103 PEYYQLYERYIRERHHDGSMYPPSRTQYKGFL-----------HCDWMPP-----LYLEM 146
Query: 400 LIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYY 459
D+RL+ V D+LP LS+ Y F+DP +A SLG ++ L ++ + +
Sbjct: 147 RKDNRLIGVATTDLLPHSLSAMYTFFDPAHADRSLGTFAILSQLELARRTGR-----SWL 201
Query: 460 YLGYYIHSCRKMRYKAAYHPSELL 483
YLGY + CRKM YK Y P E L
Sbjct: 202 YLGYLVEECRKMNYKRQYLPHERL 225
Score = 37.0 bits (84), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 55 VTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRV 106
+ Y+ LL G+RRSG+ +Y+P C ++R+ + F PS+ Q+R+
Sbjct: 36 LNASGYERLLTAGFRRSGNDIYRPHCP-ACNACQSLRIHSERFVPSRSQKRI 86
>sp|A4XUY1|ATE_PSEMY Putative arginyl-tRNA--protein transferase OS=Pseudomonas mendocina
(strain ymp) GN=ate PE=3 SV=1
Length = 235
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 73/157 (46%), Gaps = 28/157 (17%)
Query: 336 RSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDD----TVPPCG 391
R +F + ++LY RY + H D PPS D V
Sbjct: 99 RPAFTEEYYDLYVRYIEQRHADGD------------------MYPPSRDQFSTFLVRDLP 140
Query: 392 FGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQT 451
F F++ + + RLVA+ V D+LP LS+ Y F+DP SLG+++ L +I +T
Sbjct: 141 FSRFYE-FRLAGRLVAIAVTDVLPNGLSAVYTFYDPAEERRSLGRFAILWQI-----GET 194
Query: 452 HCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRY 488
L YLGY+I +CRKM YK Y P EL R+
Sbjct: 195 ARLGLGAVYLGYWIKNCRKMNYKTQYRPIELFVNQRW 231
Score = 40.0 bits (92), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%), Gaps = 5/52 (9%)
Query: 60 YQDLLDRGWRRSGSFLYKPDMER--TCCPSYTIRLRASDFAPSKEQRRVSRR 109
Y +L + G+RRSG LY+P ++ C P+ R+ A+ F P+++QRR+ +R
Sbjct: 41 YAELSEMGFRRSGDHLYRPHCQQCTACIPA---RIPAALFTPNRQQRRILKR 89
>sp|B2FTC1|ATE_STRMK Putative arginyl-tRNA--protein transferase OS=Stenotrophomonas
maltophilia (strain K279a) GN=ate PE=3 SV=1
Length = 251
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 325 AKRHKLQIRLKRSSFDPQEFELYRRYQIKVH-NDKPDQVTETSYRRFLVDS----PLVFV 379
A+ L++R+ ++ F LY RY H N D + +FL+ S + +
Sbjct: 92 ARNADLEVRITAATARDDLFALYHRYLTHRHANGGMDDHGPHEFEQFLIGSWSHTRFMEM 151
Query: 380 PPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSA 439
G D P +L+ V V D+ LS+ Y F+DPD+A LG ++
Sbjct: 152 RLPGHDGQP--------------SQLLGVAVTDVTEHGLSAVYTFFDPDHAARGLGTFAI 197
Query: 440 LQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSE 481
LQ+I W + L + YLGY+I +KM YK +HP E
Sbjct: 198 LQQIEWARRE-----GLPHVYLGYWIRGHQKMDYKRRFHPLE 234
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 11/104 (10%)
Query: 64 LDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRRMQRFLDGTVDVEKK 123
L G+RRSG +Y+P C +R+ + FAP + QRR + R D+E
Sbjct: 49 LSWGFRRSGDLVYRPHCAH-CQACVAVRIPVARFAPDRSQRRCAAR-------NADLE-- 98
Query: 124 SVELIKDPSTSNCNKVSSSVENNSLSHNNEENNKEEEILQFLSG 167
V + + + + + ++ +++ E QFL G
Sbjct: 99 -VRITAATARDDLFALYHRYLTHRHANGGMDDHGPHEFEQFLIG 141
>sp|A6T105|ATE_JANMA Putative arginyl-tRNA--protein transferase OS=Janthinobacterium sp.
(strain Marseille) GN=ate PE=3 SV=1
Length = 249
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 81/185 (43%), Gaps = 23/185 (12%)
Query: 319 SSEHPQAKRHKLQIRLKRSSFDPQEFELYRRYQIKVH-NDKPDQVTETSYRRFLVDSPLV 377
S QAK LQ + + ++ + ++LY RYQ H DQ + Y +FL+ S +
Sbjct: 87 SQRRAQAKHSDLQTSVTKLTYLAEHYDLYLRYQTARHAGGGMDQDSREQYAQFLLQSKVN 146
Query: 378 FVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKY 437
F + D L V +ID+L LSS Y F+DP+ S G Y
Sbjct: 147 ------------TRLVEFRED---DGTLRMVSIIDVLDDGLSSVYTFYDPEPPNASYGTY 191
Query: 438 SALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYDIAR 497
+ L +I+ K Q + Y YLGY+I KM YK + P E L + +W P +
Sbjct: 192 NILWQIAQAKALQ-----MPYIYLGYWIKESPKMSYKTNFQPLEAL--QQGEWTPLPVVD 244
Query: 498 PLLDR 502
P R
Sbjct: 245 PAATR 249
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 55 VTVDDYQDLLDRGWRRSGSFLYKP--DMERTCCPSYTIRLRASDFAPSKEQRRV 106
+ D Y +L+ G+RRSG F Y+P D + C P +R++ +DF P++ QRR
Sbjct: 41 INADVYSELVKSGFRRSGIFTYRPYCDGCQACTP---VRIKVADFIPNRSQRRA 91
>sp|A7N1L8|ATE_VIBHB Putative arginyl-tRNA--protein transferase OS=Vibrio harveyi
(strain ATCC BAA-1116 / BB120) GN=ate PE=3 SV=1
Length = 233
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 324 QAKRHKLQIRLKRSSFDPQEFELYRRYQIKVHNDK---PDQVTETSYRRFLVDSPLVFVP 380
Q+K L +K DP F+LY RY + H D P + E + RF + L
Sbjct: 88 QSKGKALHWEMK-PELDPNWFDLYSRYIYERHKDGTMFPPR--EDEFARFTQTTWLT--- 141
Query: 381 PSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSAL 440
GF + + DRL+AV V DI+ +C S+ Y F+DPDY LSLG L
Sbjct: 142 ---------TGFLHIYDE---SDRLLAVAVTDIMDKCASAFYTFFDPDYP-LSLGTLGVL 188
Query: 441 QEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQ 489
++ + + H + YLGY I C M YK + + L R+Q
Sbjct: 189 FQLEYCQRENKH-----WLYLGYQIDECPAMNYKTRFQRHQRLVNQRWQ 232
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 56 TVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRR 109
T D+YQ L+ G+RRSG +YKP + C IR+ DF PSK Q+R+ +
Sbjct: 38 TEDNYQVLMANGFRRSGDTIYKPHCQH-CNACQPIRIAVPDFIPSKSQKRLQSK 90
>sp|Q2Y5H6|ATE_NITMU Putative arginyl-tRNA--protein transferase OS=Nitrosospira
multiformis (strain ATCC 25196 / NCIMB 11849) GN=ate
PE=3 SV=1
Length = 251
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 79/178 (44%), Gaps = 39/178 (21%)
Query: 318 NSSEHPQAKRHKLQIRLKRSSFDPQEFELYRRYQIKVHNDKP-DQVTETSYRRFL----V 372
N H A +H L + P + LY RYQ + H+ D+ + YR FL V
Sbjct: 93 NRHRHLVATQHDLY-------YHPDHYALYLRYQAQRHSGGGMDRDSREQYRHFLLPSNV 145
Query: 373 DSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFL 432
DS LV ++ + L V +ID LP +SS Y F+DPD
Sbjct: 146 DSKLV--------------------EFRENGVLRMVSIIDELPDGISSVYTFFDPDVPGA 185
Query: 433 SLGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQW 490
S G Y+ L + +E + L Y YLGY+I RKM YKAA+ P + L + QW
Sbjct: 186 SFGTYNILWQAHQCRELK-----LPYLYLGYWIKDSRKMAYKAAFRPLQAL--INGQW 236
Score = 33.9 bits (76), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 60 YQDLLDRGWRRSGSFLYKP--DMERTCCPSYTIRLRASDFAPSKEQRRVSRRMQRFLDGT 117
Y L+ G+RRSG+F Y+P D R C P +R+ A + QRR R + +
Sbjct: 46 YGGLVQAGFRRSGAFTYRPFCDNCRACLP---VRVVVDSLALRRSQRRSWNRHRHLVATQ 102
Query: 118 VDV 120
D+
Sbjct: 103 HDL 105
>sp|Q12B44|ATE_POLSJ Putative arginyl-tRNA--protein transferase OS=Polaromonas sp.
(strain JS666 / ATCC BAA-500) GN=ate PE=3 SV=1
Length = 254
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 22/179 (12%)
Query: 327 RHK-LQIRLKRSSFDPQEFELYRRYQIKVH-NDKPDQVTETSYRRFLVDSPLVFVPPSGD 384
RH+ +Q R+ + F P+ ++LY RYQ H D + Y +FL+ S +
Sbjct: 94 RHQGMQARVLKLCFMPEHYQLYLRYQNGRHAGGGMDHDSIDQYTQFLLQSRVNSRLVEFR 153
Query: 385 DTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEIS 444
+++P G+ L V ++D+L +S+ Y F++PD S G YS L +I
Sbjct: 154 ESLPNGEAGA----------LKMVSILDVLEDGISAVYTFYEPD-TRASYGNYSVLWQIE 202
Query: 445 WVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYDIA--RPLLD 501
+ + L Y YLGY+I KM YKA + P E+L + QW P D A RP D
Sbjct: 203 QARRLE-----LPYVYLGYWIAQSPKMNYKAGFKPHEIL--VNGQWTPSDAATRRPKTD 254
Score = 37.4 bits (85), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 58 DDYQDLLDRGWRRSGSFLYKP--DMERTCCPSYTIRLRASDFAPSKEQRRVSRRMQ 111
D Y +L+ G+RRSG F Y+P D + C P +R+ F + QRR R Q
Sbjct: 44 DAYSELVTNGFRRSGMFTYRPYCDGCQACVP---LRVPVKSFKADRSQRRAWSRHQ 96
>sp|B0V8X8|ATE_ACIBY Putative arginyl-tRNA--protein transferase OS=Acinetobacter
baumannii (strain AYE) GN=ate PE=3 SV=1
Length = 271
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 61/115 (53%), Gaps = 12/115 (10%)
Query: 380 PPSGDD----TVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLG 435
PPS D V C SF + D+RL++V D++ LS+ Y F+DPD SLG
Sbjct: 132 PPSLDQFEKFLVHSCT-DSFFLELWKDNRLISVSTCDLMDDGLSAVYTFFDPDEHRRSLG 190
Query: 436 KYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQW 490
YS L +I +VK L+Y YLGY++ KM YK+ Y P ELL L QW
Sbjct: 191 VYSILNQIEYVK-----TLGLEYVYLGYWVPHSAKMNYKSQYTPLELL--LDGQW 238
>sp|A3M311|ATE_ACIBT Putative arginyl-tRNA--protein transferase OS=Acinetobacter
baumannii (strain ATCC 17978 / NCDC KC 755) GN=ate PE=3
SV=2
Length = 271
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 61/115 (53%), Gaps = 12/115 (10%)
Query: 380 PPSGDD----TVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLG 435
PPS D V C SF + D+RL++V D++ LS+ Y F+DPD SLG
Sbjct: 132 PPSLDQFEKFLVHSCT-DSFFLELWKDNRLISVSTCDLMDDGLSAVYTFFDPDEHRRSLG 190
Query: 436 KYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQW 490
YS L +I +VK L+Y YLGY++ KM YK+ Y P ELL L QW
Sbjct: 191 VYSILNQIEYVK-----TLGLEYVYLGYWVPHSAKMNYKSQYTPLELL--LDGQW 238
>sp|B0VTF8|ATE_ACIBS Putative arginyl-tRNA--protein transferase OS=Acinetobacter
baumannii (strain SDF) GN=ate PE=3 SV=1
Length = 271
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 61/115 (53%), Gaps = 12/115 (10%)
Query: 380 PPSGDD----TVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLG 435
PPS D V C SF + D+RL++V D++ LS+ Y F+DPD SLG
Sbjct: 132 PPSLDQFEKFLVHSCT-DSFFLELWKDNRLISVSTCDLMDDGLSAVYTFFDPDEHRRSLG 190
Query: 436 KYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQW 490
YS L +I +VK L+Y YLGY++ KM YK+ Y P ELL L QW
Sbjct: 191 VYSILNQIEYVK-----TLGLEYVYLGYWVPHSAKMNYKSQYTPLELL--LDGQW 238
>sp|B2HUQ9|ATE_ACIBC Putative arginyl-tRNA--protein transferase OS=Acinetobacter
baumannii (strain ACICU) GN=ate PE=3 SV=1
Length = 271
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 61/115 (53%), Gaps = 12/115 (10%)
Query: 380 PPSGDD----TVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLG 435
PPS D V C SF + D+RL++V D++ LS+ Y F+DPD SLG
Sbjct: 132 PPSLDQFEKFLVHSCT-DSFFLELWKDNRLISVSTCDLMDDGLSAVYTFFDPDEHRRSLG 190
Query: 436 KYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQW 490
YS L +I +VK L+Y YLGY++ KM YK+ Y P ELL L QW
Sbjct: 191 VYSILNQIEYVK-----TLGLEYVYLGYWVPHSAKMNYKSQYTPLELL--LDGQW 238
>sp|B7I7S8|ATE_ACIB5 Putative arginyl-tRNA--protein transferase OS=Acinetobacter
baumannii (strain AB0057) GN=ate PE=3 SV=1
Length = 271
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 61/115 (53%), Gaps = 12/115 (10%)
Query: 380 PPSGDD----TVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLG 435
PPS D V C SF + D+RL++V D++ LS+ Y F+DPD SLG
Sbjct: 132 PPSLDQFEKFLVHSCT-DSFFLELWKDNRLISVSTCDLMDDGLSAVYTFFDPDEHRRSLG 190
Query: 436 KYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQW 490
YS L +I +VK L+Y YLGY++ KM YK+ Y P ELL L QW
Sbjct: 191 VYSILNQIEYVK-----TLGLEYVYLGYWVPHSAKMNYKSQYTPLELL--LDGQW 238
>sp|B4SP02|ATE_STRM5 Putative arginyl-tRNA--protein transferase OS=Stenotrophomonas
maltophilia (strain R551-3) GN=ate PE=3 SV=1
Length = 251
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 325 AKRHKLQIRLKRSSFDPQEFELYRRYQIKVH-NDKPDQVTETSYRRFLVDS----PLVFV 379
A+ L++R+ ++ F LY RY H N D + +FL+ S + +
Sbjct: 92 ARNEDLEVRITAATARDDLFALYHRYLTHRHANGGMDDHGPHEFEQFLIGSWSHTRFMEM 151
Query: 380 PPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSA 439
G D P +L+ V V D+ LS+ Y F+DPD+A LG ++
Sbjct: 152 RLPGHDGQP--------------SQLLGVAVTDVTEHGLSAVYTFFDPDHAARGLGTFAI 197
Query: 440 LQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSE 481
LQ+I W + L + YLGY+I +KM YK Y P E
Sbjct: 198 LQQIEWARRE-----GLPHVYLGYWIRGHQKMDYKRRYRPLE 234
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 11/104 (10%)
Query: 64 LDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRRMQRFLDGTVDVEKK 123
L G+RRSG +Y+P C +R+ + FAP + QRR + R + D+E
Sbjct: 49 LSWGFRRSGDLVYRPHCAH-CQACVAVRIPVARFAPDRSQRRCAARNE-------DLE-- 98
Query: 124 SVELIKDPSTSNCNKVSSSVENNSLSHNNEENNKEEEILQFLSG 167
V + + + + + ++ +++ E QFL G
Sbjct: 99 -VRITAATARDDLFALYHRYLTHRHANGGMDDHGPHEFEQFLIG 141
>sp|A1W7D8|ATE_ACISJ Putative arginyl-tRNA--protein transferase OS=Acidovorax sp.
(strain JS42) GN=ate PE=3 SV=1
Length = 246
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 79/170 (46%), Gaps = 26/170 (15%)
Query: 326 KRHK-LQIRLKRSSFDPQEFELYRRYQIKVH-NDKPDQVTETSYRRFL----VDSPLVFV 379
KRH LQ R+ R + P+ ++LY RYQ H DQ + Y +FL V+S LV
Sbjct: 93 KRHAGLQARVLRLCYLPEHYQLYLRYQNARHAGGGMDQDSIDQYTQFLLQSRVNSRLVEF 152
Query: 380 PPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSA 439
+G D P L V ++D+L LS+ Y F++P+ S G Y+
Sbjct: 153 RETGADGQP--------------GTLKMVSILDVLEDGLSAVYTFYEPEPG-ASYGTYNV 197
Query: 440 LQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQ 489
L ++ Q L Y YLGY+I KM YKA + P EL R+Q
Sbjct: 198 LWQV-----QQARTLGLPYVYLGYWIEQSPKMNYKARFMPHELRIDGRWQ 242
Score = 39.7 bits (91), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 58 DDYQDLLDRGWRRSGSFLYKP--DMERTCCPSYTIRLRASDFAPSKEQRRVSRR 109
D Y L+ RG+RRSG F Y+P D + C P +R+ F P + QRR +R
Sbjct: 44 DVYSGLVARGFRRSGMFTYRPYCDGCQACTP---LRVVVDPFKPDRSQRRAWKR 94
>sp|B9MJA6|ATE_ACIET Putative arginyl-tRNA--protein transferase OS=Acidovorax ebreus
(strain TPSY) GN=ate PE=3 SV=1
Length = 246
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 79/170 (46%), Gaps = 26/170 (15%)
Query: 326 KRHK-LQIRLKRSSFDPQEFELYRRYQIKVH-NDKPDQVTETSYRRFL----VDSPLVFV 379
KRH LQ R+ R + P+ ++LY RYQ H DQ + Y +FL V+S LV
Sbjct: 93 KRHAGLQARVLRLCYLPEHYQLYLRYQNARHAGGGMDQDSIDQYTQFLLQSRVNSRLVEF 152
Query: 380 PPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSA 439
+G D P L V ++D+L LS+ Y F++P+ S G Y+
Sbjct: 153 RETGADGQP--------------GTLKMVSILDVLEDGLSAVYTFYEPEPG-ASYGTYNV 197
Query: 440 LQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQ 489
L ++ Q L Y YLGY+I KM YKA + P EL R+Q
Sbjct: 198 LWQV-----QQARTLGLPYVYLGYWIEQSPKMNYKARFMPHELRIDGRWQ 242
Score = 39.7 bits (91), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 58 DDYQDLLDRGWRRSGSFLYKP--DMERTCCPSYTIRLRASDFAPSKEQRRVSRR 109
D Y L+ RG+RRSG F Y+P D + C P +R+ F P + QRR +R
Sbjct: 44 DVYSGLVARGFRRSGMFTYRPYCDGCQACTP---LRVVVDPFKPDRSQRRAWKR 94
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 232,009,627
Number of Sequences: 539616
Number of extensions: 9869452
Number of successful extensions: 52330
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 51223
Number of HSP's gapped (non-prelim): 759
length of query: 636
length of database: 191,569,459
effective HSP length: 124
effective length of query: 512
effective length of database: 124,657,075
effective search space: 63824422400
effective search space used: 63824422400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)