Your job contains 1 sequence.
>006658
MEIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMD
KGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQET
PLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS
LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY
PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY
PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIA
AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLG
RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRP
PKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSVEPS
TSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISSFCQNE
SLEELEPPELTAPCFKTAFVATQKPIIKLQFSSLVK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006658
(636 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2030943 - symbol:PAPS1 "poly(A) polymerase 1" ... 1580 3.5e-165 2
TAIR|locus:2043560 - symbol:PAPS2 "poly(A) polymerase 2" ... 1439 2.4e-147 1
TAIR|locus:2134113 - symbol:nPAP "nuclear poly(a) polymer... 1437 3.9e-147 1
DICTYBASE|DDB_G0288259 - symbol:papA "poly(A) polymerase"... 1089 2.9e-110 1
ZFIN|ZDB-GENE-040426-1256 - symbol:papolg "poly(A) polyme... 999 1.0e-100 1
UNIPROTKB|Q9NRJ5 - symbol:PAPOLB "Poly(A) polymerase beta... 952 9.7e-96 1
UNIPROTKB|A5D7N5 - symbol:PAPOLG "Uncharacterized protein... 948 2.6e-95 1
UNIPROTKB|F1NKG9 - symbol:PAPOLA "Uncharacterized protein... 947 3.3e-95 1
UNIPROTKB|Q9BWT3 - symbol:PAPOLG "Poly(A) polymerase gamm... 947 3.3e-95 1
UNIPROTKB|F1SQL7 - symbol:PAPOLG "Uncharacterized protein... 947 3.3e-95 1
RGD|1310337 - symbol:Papolg "poly(A) polymerase gamma" sp... 945 5.3e-95 1
MGI|MGI:2442119 - symbol:Papolg "poly(A) polymerase gamma... 944 6.8e-95 1
UNIPROTKB|G3MYA2 - symbol:PAPOLA "Poly(A) polymerase alph... 940 1.8e-94 1
UNIPROTKB|P25500 - symbol:PAPOLA "Poly(A) polymerase alph... 940 1.8e-94 1
UNIPROTKB|Q3T0A2 - symbol:PAPOLA "Poly(A) polymerase alph... 940 1.8e-94 1
UNIPROTKB|J9NS30 - symbol:PAPOLG "Uncharacterized protein... 940 1.8e-94 1
UNIPROTKB|F1PDS0 - symbol:PAPOLA "Uncharacterized protein... 939 2.3e-94 1
UNIPROTKB|G3XAH6 - symbol:PAPOLA "Poly(A) polymerase alph... 939 2.3e-94 1
UNIPROTKB|P51003 - symbol:PAPOLA "Poly(A) polymerase alph... 939 2.3e-94 1
UNIPROTKB|F1SAQ7 - symbol:PAPOLA "Uncharacterized protein... 938 3.0e-94 1
UNIPROTKB|I3L6F0 - symbol:PAPOLA "Uncharacterized protein... 938 3.0e-94 1
MGI|MGI:109301 - symbol:Papola "poly (A) polymerase alpha... 931 1.6e-93 1
ZFIN|ZDB-GENE-030131-3507 - symbol:papola "poly(A) polyme... 929 2.7e-93 1
WB|WBGene00011791 - symbol:T15H9.6 species:6239 "Caenorha... 926 5.5e-93 1
UNIPROTKB|Q09995 - symbol:T15H9.6 "Protein T15H9.6" speci... 926 5.5e-93 1
UNIPROTKB|I3LRR6 - symbol:PAPOLB "Uncharacterized protein... 925 7.0e-93 1
WB|WBGene00009658 - symbol:F43G6.5 species:6239 "Caenorha... 922 1.5e-92 1
RGD|1310946 - symbol:Papolb "poly (A) polymerase beta (te... 921 1.9e-92 1
MGI|MGI:1932115 - symbol:Papolb "poly (A) polymerase beta... 919 3.0e-92 1
FB|FBgn0015949 - symbol:hrg "hiiragi" species:7227 "Droso... 918 3.9e-92 1
UNIPROTKB|F1NL95 - symbol:F1NL95 "Uncharacterized protein... 897 6.5e-90 1
UNIPROTKB|F1P3A1 - symbol:F1P3A1 "Uncharacterized protein... 897 6.5e-90 1
POMBASE|SPBC646.04 - symbol:pla1 "poly(A) polymerase Pla1... 863 1.5e-89 2
CGD|CAL0002451 - symbol:PAP1 species:5476 "Candida albica... 831 1.5e-87 2
UNIPROTKB|Q9UW26 - symbol:PAPA "Poly(A) polymerase PAPa" ... 831 1.5e-87 2
WB|WBGene00012528 - symbol:pap-1 species:6239 "Caenorhabd... 836 1.9e-83 1
UNIPROTKB|Q9U2P3 - symbol:pap-1 "Protein PAP-1" species:6... 836 1.9e-83 1
SGD|S000001710 - symbol:PAP1 "Poly(A) polymerase, one of ... 807 8.3e-83 2
GENEDB_PFALCIPARUM|PFF1240w - symbol:PFF1240w "poly(A) po... 687 6.6e-79 2
UNIPROTKB|C6KT92 - symbol:PFF1240w "Poly(A) polymerase PA... 687 6.6e-79 2
UNIPROTKB|F1NDP1 - symbol:PAPOLA "Uncharacterized protein... 757 4.5e-75 1
RGD|1308673 - symbol:Papola "poly (A) polymerase alpha" s... 712 2.0e-73 2
UNIPROTKB|D4A764 - symbol:Papola "Protein Papola" species... 654 4.7e-68 2
TAIR|locus:2084274 - symbol:PAPS3 "poly(A) polymerase 3" ... 658 1.4e-64 1
UNIPROTKB|F8WAT4 - symbol:PAPOLG "Poly(A) polymerase gamm... 601 1.5e-58 1
UNIPROTKB|H0YJ00 - symbol:PAPOLA "Poly(A) polymerase alph... 542 2.7e-52 1
UNIPROTKB|G3V2A0 - symbol:PAPOLA "Poly(A) polymerase alph... 386 1.5e-35 1
UNIPROTKB|H7C3W0 - symbol:PAPOLG "Poly(A) polymerase gamm... 264 5.2e-22 1
UNIPROTKB|G3V3I9 - symbol:PAPOLA "Poly(A) polymerase alph... 230 2.5e-18 1
UNIPROTKB|G4N5I8 - symbol:MGG_06121 "Uncharacterized prot... 257 2.7e-18 1
UNIPROTKB|F1NDP2 - symbol:PAPOLA "Uncharacterized protein... 160 8.9e-11 1
UNIPROTKB|G3V457 - symbol:PAPOLA "Poly(A) polymerase alph... 160 8.9e-11 1
UNIPROTKB|Q59G05 - symbol:PAPOLG "Poly(A) polymerase gamm... 163 6.8e-09 1
UNIPROTKB|F1PYB9 - symbol:PAPOLG "Uncharacterized protein... 162 8.9e-09 1
>TAIR|locus:2030943 [details] [associations]
symbol:PAPS1 "poly(A) polymerase 1" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043631 "RNA
polyadenylation" evidence=IDA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006351 EMBL:AC034106
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
UniGene:At.26787 UniGene:At.73166 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 HSSP:P25500 BRENDA:2.7.7.19
EMBL:BT005990 EMBL:AY323906 EMBL:AK227446 IPI:IPI00540119
PIR:B86315 RefSeq:NP_173240.2 ProteinModelPortal:Q9LMT2 SMR:Q9LMT2
IntAct:Q9LMT2 STRING:Q9LMT2 PaxDb:Q9LMT2 PRIDE:Q9LMT2
EnsemblPlants:AT1G17980.1 GeneID:838378 KEGG:ath:AT1G17980
TAIR:At1g17980 InParanoid:Q9LMT2 OMA:WDTLFEP PhylomeDB:Q9LMT2
ProtClustDB:CLSN2680711 Genevestigator:Q9LMT2 Uniprot:Q9LMT2
Length = 713
Score = 1580 (561.2 bits), Expect = 3.5e-165, Sum P(2) = 3.5e-165
Identities = 303/479 (63%), Positives = 360/479 (75%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS PT DVI T+ELEK L D L+ S+EE++ R EVLG LD IVK WIK ++ K
Sbjct: 15 EPISMGGPTEFDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILDQIVKTWIKTISRAK 74
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G++D+ + EANAK+FTFGSYRLGV GP DID LCVGP +ATR DFFG+L RML E P
Sbjct: 75 GLNDQ-LLHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGDFFGELQRMLSEMP 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVPDA VP++ FK NGVS+DLLYAQL VIPEDLD QDS+L N DEQTV SL
Sbjct: 134 EVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNADEQTVRSL 193
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD+IL LVPNI+NFR+TLRC+RFWAKRRG+YSN GFLGGINWALLVAR+CQLYP
Sbjct: 194 NGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLYP 253
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NALPN+LVSRFF++F W WPN + LC ++ VWDPR N +DR H+MPIITP+YP
Sbjct: 254 NALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPIITPAYP 313
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
C NSSYNVS +TLRIM+ EFQR E+CE +E+ K W TLFEP+ FF ++KNYLQI I+A
Sbjct: 314 CMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAFFEAYKNYLQIDISA 373
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
N D R+WKGWVESRLRQL IER +L C +P DF + S C YFMGL R
Sbjct: 374 ANVDDLRKWKGWVESRLRQLTLKIERHFK-MLHCHPHPHDFQDTS--RPLHCSYFMGLQR 430
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRP 480
KQGV +GE+FD+R TVEEFK H V Y+ W GM+I V H++ + +P+FVFPGGVRP
Sbjct: 431 KQGVPAAEGEQFDIRRTVEEFK-HTVNAYTLWIPGMEISVGHIKRRSLPNFVFPGGVRP 488
Score = 49 (22.3 bits), Expect = 3.5e-165, Sum P(2) = 3.5e-165
Identities = 11/17 (64%), Positives = 13/17 (76%)
Query: 620 VATQKPIIKLQFSSLVK 636
V +KPIIKL F+SL K
Sbjct: 693 VQQRKPIIKLSFTSLGK 709
>TAIR|locus:2043560 [details] [associations]
symbol:PAPS2 "poly(A) polymerase 2" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA;ISS]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=RCA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006351 GO:GO:0003723 EMBL:AC005395
GO:GO:0004652 GO:GO:0043631 KO:K14376 eggNOG:COG5186
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376 HSSP:P25500
EMBL:AF255297 EMBL:AY039974 EMBL:AY074533 IPI:IPI00518420
PIR:E84653 RefSeq:NP_565611.1 UniGene:At.14867 SMR:O82312
IntAct:O82312 STRING:O82312 EnsemblPlants:AT2G25850.2 GeneID:817127
KEGG:ath:AT2G25850 TAIR:At2g25850 InParanoid:O82312 OMA:MGSESIN
ProtClustDB:CLSN2688428 BRENDA:2.7.7.19 Genevestigator:O82312
Uniprot:O82312
Length = 800
Score = 1439 (511.6 bits), Expect = 2.4e-147, P = 2.4e-147
Identities = 269/492 (54%), Positives = 352/492 (71%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E +S + P+ DV ELEK LVDE L+ S+EE++ R EV+ R+D IVK W+K++T +
Sbjct: 27 EPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVKQLTRQR 86
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFR-MLQET 120
G +D+ +++ANA +FTFGSYRLGV GP DID LCVGP Y R +DFF FR +L E
Sbjct: 87 GYTDQ-MVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFF-IFFRDILAEM 144
Query: 121 PLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
V +L PV DA VPV+KFKF G+S+DLLYA + VIP+DLD S+L ++DEQTV S
Sbjct: 145 EEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVRS 204
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNGCRV D+IL LVPN +FR+TLRCL++WAK+RG+YSN GFLGG+NWALLVAR+CQ Y
Sbjct: 205 LNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQFY 264
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
PNA+P++LVSRFF+++ W+WPNPVMLC I+ + VWDPR N RDR HLMPIITP+Y
Sbjct: 265 PNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAY 324
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIA 360
PC NSSYNVS +TLR+M E+FQ +C+EIE K+ W +LF+ Y FF ++KNYLQ+ +
Sbjct: 325 PCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQVDVL 384
Query: 361 AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLG 420
A +A D WKGWVESR RQL IERD G+L C P ++ + S K C +FMGL
Sbjct: 385 AADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTS-KQFRHCAFFMGLQ 443
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGV-R 479
R G Q+ ++FD+R TV+EF+ V MY W+ GM +HVSH+R + +P FVFP G R
Sbjct: 444 RADGFGGQECQQFDIRGTVDEFRQEVN-MYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKR 502
Query: 480 PPKSLNEKKRKR 491
+S ++ ++ R
Sbjct: 503 SRQSRHQSQQCR 514
>TAIR|locus:2134113 [details] [associations]
symbol:nPAP "nuclear poly(a) polymerase" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA;ISS] [GO:0031123
"RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006623 "protein targeting to vacuole"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 EMBL:CP002687
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 IPI:IPI00656923
RefSeq:NP_001031779.1 UniGene:At.25084 ProteinModelPortal:F4JV63
SMR:F4JV63 PRIDE:F4JV63 EnsemblPlants:AT4G32850.8 GeneID:829421
KEGG:ath:AT4G32850 OMA:EDQLEWC PhylomeDB:F4JV63 Uniprot:F4JV63
Length = 765
Score = 1437 (510.9 bits), Expect = 3.9e-147, P = 3.9e-147
Identities = 264/479 (55%), Positives = 344/479 (71%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + P+ D+ ELEK LVDE L+ S+++++ R EVLGR+D IVK W+K++T +G
Sbjct: 27 LSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLTQQRGY 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ +++ANA +FTFGSYRLGV GP DID LCVGP Y R +DFF L +L E V
Sbjct: 87 TDQ-MVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEV 145
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF G+ +DLLYA + V+P+DLD S+L +DE TV SLNG
Sbjct: 146 TELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNG 205
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN +FR+TLRCL++WAK+RG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 206 CRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNA 265
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WPNPVMLC I+ + VWD R N RDR HLMPIITP+YPC
Sbjct: 266 IPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCM 325
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS +TLR+M E+FQ + +EIE K+ W +LFE Y FF ++KNYLQ+ I A +
Sbjct: 326 NSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAAD 385
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
A D WKGWVESR RQL IERD G+L C P ++ + + + C +FMGL R +
Sbjct: 386 AEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTA-RQFLHCAFFMGLQRAE 444
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPK 482
GV Q+ ++FD+R TV+EF+ V MY WK GM + VSH+R + +P FVFP G R P+
Sbjct: 445 GVGGQECQQFDIRGTVDEFRQEVN-MYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPR 502
>DICTYBASE|DDB_G0288259 [details] [associations]
symbol:papA "poly(A) polymerase" species:44689
"Dictyostelium discoideum" [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA;ISS;IBA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=ISS;IBA] [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
dictyBase:DDB_G0288259 GO:GO:0005524 GO:GO:0046872 GO:GO:0006378
GO:GO:0006351 GenomeReviews:CM000154_GR GO:GO:0003723
EMBL:AAFI02000109 GO:GO:0005847 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003 HSSP:P25500
RefSeq:XP_636814.1 ProteinModelPortal:Q54J73 STRING:Q54J73
EnsemblProtists:DDB0216279 GeneID:8626531 KEGG:ddi:DDB_G0288259
OMA:NINESST ProtClustDB:PTZ00418 Uniprot:Q54J73
Length = 809
Score = 1089 (388.4 bits), Expect = 2.9e-110, P = 2.9e-110
Identities = 225/495 (45%), Positives = 313/495 (63%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IST+ P+ +D + ELE L+ LF S EES R E+LG+L+ IV++W K+V++ K
Sbjct: 57 EPISTAPPSSIDFKLSTELENTLISFNLFESPEESRKREEILGKLNQIVREWAKQVSLKK 116
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G E+ E AK+FTFGSYRLGV GP +DID LCVGP + R DFF L +L+ P
Sbjct: 117 GYP-EQTASEVVAKIFTFGSYRLGVHGPGSDIDTLCVGPKHIMR-SDFFDDLSDILKVHP 174
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQD-SLLHNLDEQTVLS 180
+ + T V DA VPVI F+G+ +DL+YA+L + IPE+L+ L D S L N+DE+++LS
Sbjct: 175 EITEFTTVKDAFVPVITMVFSGIPIDLIYAKLALTAIPEELNDLIDESFLKNIDEKSILS 234
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNGCRVTD+IL LVPNI NFR LRC++ WA RRGIYSN +GFLGG++WALL AR+CQLY
Sbjct: 235 LNGCRVTDQILKLVPNIPNFRMALRCIKLWAIRRGIYSNILGFLGGVSWALLTARICQLY 294
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA-MPHHVWDPRSNQRDRKHLMPIITPS 299
PN+ P+ ++ RFFK++ WKWP P++LC IQ + VW+P+ RD+ HLMPIITP+
Sbjct: 295 PNSAPSTIIHRFFKVYEIWKWPAPILLCHIQEGGILGPKVWNPK---RDKAHLMPIITPA 351
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
YP NS+YNVS +TL++M+ EF R E+ +IE G+ TW L E FF + Y++I
Sbjct: 352 YPSMNSTYNVSKSTLQLMKSEFVRGAEITRKIETGECTWKNLLEKCDFFTRYSFYIEIDC 411
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQ---C-HY 415
+ N D R+W+GW+ES+LR LI +E YP F+ N K+++ C +
Sbjct: 412 YSMNEEDSRKWEGWIESKLRFLISNLESTPKMKFAVP-YPKGFTNNLHKANNPDQICTSF 470
Query: 416 FMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVV-WMYSSWKQG-MQIHVSHLRCQDIPDFV 473
FMGL +P + D+ V EF + W+ + M I V +++ + +P FV
Sbjct: 471 FMGLSFNFSNTPGADKSVDLTKAVTEFTGIIKDWLRTQPNPDTMDIKVQYIKKKQLPAFV 530
Query: 474 FPGGVRPPKSLNEKK 488
G P +K+
Sbjct: 531 KDEGPEEPVKTTKKR 545
>ZFIN|ZDB-GENE-040426-1256 [details] [associations]
symbol:papolg "poly(A) polymerase gamma"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA;IBA]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IBA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
ZFIN:ZDB-GENE-040426-1256 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 KO:K14376 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOVERGEN:HBG053502 CTD:64895 EMBL:BC056818
IPI:IPI00492667 RefSeq:NP_956915.1 UniGene:Dr.79169
ProteinModelPortal:Q6PGV5 SMR:Q6PGV5 STRING:Q6PGV5 PRIDE:Q6PGV5
GeneID:393593 KEGG:dre:393593 InParanoid:Q6PGV5 NextBio:20814613
ArrayExpress:Q6PGV5 Bgee:Q6PGV5 Uniprot:Q6PGV5
Length = 744
Score = 999 (356.7 bits), Expect = 1.0e-100, P = 1.0e-100
Identities = 213/493 (43%), Positives = 299/493 (60%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + + +F E+E R+ VLG+L+ VK+WI ++ K +
Sbjct: 27 ISLAFPREIDHIYTQKLTEAMKPFGVFEGEDELNHRLAVLGKLNSFVKEWISEISESKNL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 87 PPSA-VANVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-TDFFSSFFEKLKRHDEI 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V DA VPVIKFKF+G+ +DLL+A+L IP++LD DSLL NLD + + SLNG
Sbjct: 145 KDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN NFR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 265 VAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T IM EEF+ + +EI GK W LFEP +FF +++Y+ + +A
Sbjct: 325 NSTYNVSTSTRTIMNEEFKNGLTVTDEILQGKADWSKLFEPPNFFQQYRHYIVLTASAST 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG EN ++ +F+G+
Sbjct: 385 EENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGS-KENRNENDFVSMWFIGIS 443
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
K+ + D D+ ++ F V S+ K GM I +H++ + + ++ P
Sbjct: 444 FKK-LDNSDCVNIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHVKKKQLHHYLPPEL 502
Query: 478 V-RPPKSLNEKKR 489
V R KSL + R
Sbjct: 503 VQRKKKSLGDINR 515
>UNIPROTKB|Q9NRJ5 [details] [associations]
symbol:PAPOLB "Poly(A) polymerase beta" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IBA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0006378 GO:GO:0003723
EMBL:AC092610 GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
HOVERGEN:HBG053502 EMBL:AF218840 EMBL:BC036653 IPI:IPI00024525
RefSeq:NP_064529.4 UniGene:Hs.487409 ProteinModelPortal:Q9NRJ5
SMR:Q9NRJ5 STRING:Q9NRJ5 PhosphoSite:Q9NRJ5 DMDM:18203318
PaxDb:Q9NRJ5 PRIDE:Q9NRJ5 DNASU:56903 Ensembl:ENST00000404991
GeneID:56903 KEGG:hsa:56903 CTD:56903 GeneCards:GC07M004897
HGNC:HGNC:15970 MIM:607436 neXtProt:NX_Q9NRJ5 PharmGKB:PA32933
InParanoid:Q9NRJ5 OMA:FPGGVAW OrthoDB:EOG4THVSN GenomeRNAi:56903
NextBio:62363 ArrayExpress:Q9NRJ5 Bgee:Q9NRJ5 CleanEx:HS_PAPOLB
Genevestigator:Q9NRJ5 Uniprot:Q9NRJ5
Length = 636
Score = 952 (340.2 bits), Expect = 9.7e-96, P = 9.7e-96
Identities = 213/535 (39%), Positives = 302/535 (56%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D + T+ L + L +F EEE R+ VL +L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREISESKSL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDR-SDFFTSFYAKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 324 NSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAST 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN + + +GLG
Sbjct: 384 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWVIGLG 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ P + E + LT ++ F V + K GM+I HLR +++ + P
Sbjct: 443 LKK---PDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAMHLRRKELHQLL-P 498
Query: 476 GGVRPPKSLNEKKRKRIEVIXXXXXXXXXXXXAGHSSGQKSSQTESGVALDGSHG 530
V K + + +R+ + S +S ++G + S G
Sbjct: 499 HHVLQDKKAHSTEGRRLTDLNDSSFDLSAGCENSMSVPSSTSTMKTGPLISSSQG 553
>UNIPROTKB|A5D7N5 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 CTD:64895 OMA:IDGSSKR OrthoDB:EOG4R23T8
EMBL:DAAA02031008 EMBL:DAAA02031009 EMBL:BC140625 IPI:IPI00695296
RefSeq:NP_001091535.1 UniGene:Bt.24299 SMR:A5D7N5
Ensembl:ENSBTAT00000009749 GeneID:529071 KEGG:bta:529071
InParanoid:A5D7N5 NextBio:20874959 Uniprot:A5D7N5
Length = 740
Score = 948 (338.8 bits), Expect = 2.6e-95, P = 2.6e-95
Identities = 201/495 (40%), Positives = 299/495 (60%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISEVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 PPSV-VATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I E+LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRI 492
P + L +KK++ +
Sbjct: 497 --PAEILQKKKKQSL 509
>UNIPROTKB|F1NKG9 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006378 "mRNA polyadenylation" evidence=IBA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0005737
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 CTD:10914
GeneTree:ENSGT00390000017928 OMA:SPVTTQG EMBL:AADN02003685
IPI:IPI00820771 RefSeq:NP_001185530.1 UniGene:Gga.4316
Ensembl:ENSGALT00000037556 GeneID:395878 KEGG:gga:395878
NextBio:20815945 ArrayExpress:F1NKG9 Uniprot:F1NKG9
Length = 737
Score = 947 (338.4 bits), Expect = 3.3e-95, P = 3.3e-95
Identities = 204/498 (40%), Positives = 293/498 (58%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 25 ISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L++ V
Sbjct: 85 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFTSFYEKLKQQEEV 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 143 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 323 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 383 EKQRLEWVGLVESKIRILVGNLEKNEFITL-AHVNPQSFPAPKENPDKEEYRTMWVIGLV 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFPGG 477
K+ + D+ ++ F V + K M+I H++ + + + P
Sbjct: 442 FKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAARHVKRKQLHQLL-PNH 499
Query: 478 VRPPKSLNEKKRKRIEVI 495
V K + + R+ +
Sbjct: 500 VLQKKKKHSTEGVRLTAL 517
>UNIPROTKB|Q9BWT3 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0006378 "mRNA polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005524 GO:GO:0005634 EMBL:CH471053
GO:GO:0046872 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 HOVERGEN:HBG053502
EMBL:AY029162 EMBL:AF312211 EMBL:AJ308101 EMBL:AK021867
EMBL:AK023544 EMBL:AK314663 EMBL:BC111701 EMBL:BC113747
IPI:IPI00304442 RefSeq:NP_075045.2 UniGene:Hs.387471
ProteinModelPortal:Q9BWT3 SMR:Q9BWT3 STRING:Q9BWT3
PhosphoSite:Q9BWT3 DMDM:116242699 PaxDb:Q9BWT3 PRIDE:Q9BWT3
Ensembl:ENST00000238714 GeneID:64895 KEGG:hsa:64895 UCSC:uc002sai.3
CTD:64895 GeneCards:GC02P060983 HGNC:HGNC:14982 HPA:CAB017795
neXtProt:NX_Q9BWT3 PharmGKB:PA32934 InParanoid:Q9BWT3 OMA:IDGSSKR
OrthoDB:EOG4R23T8 PhylomeDB:Q9BWT3 GenomeRNAi:64895 NextBio:67037
ArrayExpress:Q9BWT3 Bgee:Q9BWT3 CleanEx:HS_PAPOLG
Genevestigator:Q9BWT3 GermOnline:ENSG00000115421 Uniprot:Q9BWT3
Length = 736
Score = 947 (338.4 bits), Expect = 3.3e-95, P = 3.3e-95
Identities = 206/526 (39%), Positives = 311/526 (59%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS ++P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 PPSV-VATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRIEVIXXXXXXXXXXXXAGHSSGQKSSQ-TESG 522
P + L +KK++ + + + SS SS+ T++G
Sbjct: 497 --PAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSRDTDNG 540
>UNIPROTKB|F1SQL7 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 KO:K14376 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 CTD:64895 OMA:IDGSSKR EMBL:CU467691
RefSeq:XP_003125156.1 UniGene:Ssc.62549 Ensembl:ENSSSCT00000009186
GeneID:100523547 KEGG:ssc:100523547 Uniprot:F1SQL7
Length = 741
Score = 947 (338.4 bits), Expect = 3.3e-95, P = 3.3e-95
Identities = 205/526 (38%), Positives = 310/526 (58%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISEVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 PPSV-VATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRIEVIXXXXXXXXXXXXAGHSSGQKSSQ-TESG 522
P + L +KK++ + + + S+ SS+ T++G
Sbjct: 497 --PAEILQKKKKQSLSDVTRSSSGPQSKRSSLDSNCLDSSRDTDNG 540
>RGD|1310337 [details] [associations]
symbol:Papolg "poly(A) polymerase gamma" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1310337 GO:GO:0005634 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
CTD:64895 OrthoDB:EOG4R23T8 EMBL:CH473996 IPI:IPI00365079
RefSeq:NP_001100714.1 UniGene:Rn.27992 Ensembl:ENSRNOT00000008919
GeneID:305586 KEGG:rno:305586 UCSC:RGD:1310337 NextBio:654829
Uniprot:D3ZAN6
Length = 739
Score = 945 (337.7 bits), Expect = 5.3e-95, P = 5.3e-95
Identities = 205/525 (39%), Positives = 304/525 (57%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI ++ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDISESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ V
Sbjct: 85 PPSV-VATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGV 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKANNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRIEVIXXXXXXXXXXXXAGHSSGQKSSQTESG 522
P + L +KK+ +V + S T+SG
Sbjct: 497 --PAEILQKKKKSLSDVSRSSGGLQSKRSSLDSNCLDSSRDTDSG 539
>MGI|MGI:2442119 [details] [associations]
symbol:Papolg "poly(A) polymerase gamma" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0006378 "mRNA polyadenylation" evidence=IBA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
MGI:MGI:2442119 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 CTD:64895 OMA:IDGSSKR OrthoDB:EOG4R23T8
EMBL:DQ103505 EMBL:AK035810 EMBL:AL662810 EMBL:BC059271
IPI:IPI00317437 RefSeq:NP_766143.2 UniGene:Mm.470599 HSSP:P25500
ProteinModelPortal:Q6PCL9 SMR:Q6PCL9 PhosphoSite:Q6PCL9
PaxDb:Q6PCL9 PRIDE:Q6PCL9 Ensembl:ENSMUST00000020513 GeneID:216578
KEGG:mmu:216578 UCSC:uc007ifp.2 InParanoid:Q6PCL9 NextBio:375224
Bgee:Q6PCL9 CleanEx:MM_PAPOLG Genevestigator:Q6PCL9
GermOnline:ENSMUSG00000020273 Uniprot:Q6PCL9
Length = 739
Score = 944 (337.4 bits), Expect = 6.8e-95, P = 6.8e-95
Identities = 204/525 (38%), Positives = 304/525 (57%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI ++ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDISESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 PPSV-VATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKANNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRIEVIXXXXXXXXXXXXAGHSSGQKSSQTESG 522
P + L +KK+ +V + S T+SG
Sbjct: 497 --PAEILQKKKKSLSDVSRSSGGLQSKRSSLDSTCLDSSRDTDSG 539
>UNIPROTKB|G3MYA2 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
taurus" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 EMBL:DAAA02053163
Ensembl:ENSBTAT00000063150 Uniprot:G3MYA2
Length = 718
Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
Identities = 205/496 (41%), Positives = 291/496 (58%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFPGG 477
K+ + D+ ++ F V + K M+I H++ + + +
Sbjct: 443 FKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---- 497
Query: 478 VRPPKSLNEKKRKRIE 493
P L +KK+ E
Sbjct: 498 --PSHVLQKKKKHSTE 511
>UNIPROTKB|P25500 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IDA] [GO:0000287
"magnesium ion binding" evidence=IDA] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0043631 "RNA polyadenylation"
evidence=IDA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IDA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000287 GO:GO:0006378 GO:GO:0003723
GO:GO:0030145 GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003 EMBL:X61585
EMBL:X63436 IPI:IPI00686724 IPI:IPI00699231 PIR:S17875 PIR:S17925
PIR:S18642 RefSeq:NP_788820.1 UniGene:Bt.109586 PDB:1F5A PDB:1Q78
PDB:1Q79 PDBsum:1F5A PDBsum:1Q78 PDBsum:1Q79
ProteinModelPortal:P25500 SMR:P25500 STRING:P25500
Ensembl:ENSBTAT00000005300 GeneID:338051 KEGG:bta:338051 CTD:10914
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 InParanoid:P25500 OMA:SPVTTQG
EvolutionaryTrace:P25500 NextBio:20812502 ArrayExpress:P25500
Uniprot:P25500
Length = 739
Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
Identities = 205/496 (41%), Positives = 291/496 (58%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFPGG 477
K+ + D+ ++ F V + K M+I H++ + + +
Sbjct: 443 FKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---- 497
Query: 478 VRPPKSLNEKKRKRIE 493
P L +KK+ E
Sbjct: 498 --PSHVLQKKKKHSTE 511
>UNIPROTKB|Q3T0A2 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
taurus" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003 UniGene:Bt.109586
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 OrthoDB:EOG4J6RQB EMBL:DAAA02053163
EMBL:BC102481 IPI:IPI00705304 SMR:Q3T0A2 STRING:Q3T0A2
Ensembl:ENSBTAT00000021001 Uniprot:Q3T0A2
Length = 693
Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
Identities = 205/496 (41%), Positives = 291/496 (58%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFPGG 477
K+ + D+ ++ F V + K M+I H++ + + +
Sbjct: 443 FKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---- 497
Query: 478 VRPPKSLNEKKRKRIE 493
P L +KK+ E
Sbjct: 498 --PSHVLQKKKKHSTE 511
>UNIPROTKB|J9NS30 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 OMA:IDGSSKR EMBL:AAEX03007549
Ensembl:ENSCAFT00000044895 Uniprot:J9NS30
Length = 813
Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
Identities = 204/526 (38%), Positives = 310/526 (58%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 PPSV-VATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVT+ IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTNEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRIEVIXXXXXXXXXXXXAGHSSGQKSSQ-TESG 522
P + L +KK++ + + + S+ SS+ T++G
Sbjct: 497 --PAEILQKKKKQSLSDVSRSSSGPQSKRSSLDSNCLDSSRDTDNG 540
>UNIPROTKB|F1PDS0 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IBA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0005737 GO:GO:0006378 GO:GO:0003723
GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 OMA:SPVTTQG
EMBL:AAEX03005970 EMBL:AAEX03005971 Ensembl:ENSCAFT00000028221
Uniprot:F1PDS0
Length = 745
Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
Identities = 204/495 (41%), Positives = 291/495 (58%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 32 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 91
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 92 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 149
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 150 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 209
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 210 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 269
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 270 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 329
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 330 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 389
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 390 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 448
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFPGG 477
K+ + D+ ++ F V + K M+I H++ + + + P
Sbjct: 449 FKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-PNH 506
Query: 478 VRPPKSLNEKKRKRI 492
V K + + R+
Sbjct: 507 VLQKKKKHSTEGVRL 521
>UNIPROTKB|G3XAH6 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 EMBL:AL163051
Gene3D:3.30.70.590 SUPFAM:SSF55003 HGNC:HGNC:14981 ChiTaRS:PAPOLA
ProteinModelPortal:G3XAH6 SMR:G3XAH6 Ensembl:ENST00000392990
ArrayExpress:G3XAH6 Bgee:G3XAH6 Uniprot:G3XAH6
Length = 724
Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
Identities = 196/446 (43%), Positives = 273/446 (61%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHV 446
K+ + D+ ++ F V
Sbjct: 443 FKK-TENSENLSVDLTYDIQSFTDTV 467
>UNIPROTKB|P51003 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IBA] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006378 "mRNA
polyadenylation" evidence=NAS] [GO:0003723 "RNA binding"
evidence=NAS] [GO:0043631 "RNA polyadenylation" evidence=ISS]
[GO:0000287 "magnesium ion binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0030145 "manganese ion binding"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0031124 "mRNA 3'-end processing"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_71 InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005524 GO:GO:0005737 GO:GO:0005654 GO:GO:0000287
Reactome:REACT_1675 GO:GO:0006378 GO:GO:0003723 GO:GO:0030145
GO:GO:0000398 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0004652
Reactome:REACT_78 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 CTD:10914 HOVERGEN:HBG053502 OMA:SPVTTQG
EMBL:BC000927 EMBL:BC036014 EMBL:BX248301 EMBL:BX248753
EMBL:BX161482 EMBL:X76770 IPI:IPI00384028 IPI:IPI01025082
RefSeq:NP_001238935.1 RefSeq:NP_001238936.1 RefSeq:NP_116021.2
UniGene:Hs.253726 ProteinModelPortal:P51003 SMR:P51003
DIP:DIP-27610N IntAct:P51003 MINT:MINT-125699 STRING:P51003
PhosphoSite:P51003 DMDM:59803092 PaxDb:P51003 PeptideAtlas:P51003
PRIDE:P51003 Ensembl:ENST00000216277 Ensembl:ENST00000557320
Ensembl:ENST00000557471 GeneID:10914 KEGG:hsa:10914 UCSC:uc001yfo.3
UCSC:uc001yfq.3 GeneCards:GC14P096969 HGNC:HGNC:14981 HPA:HPA001788
MIM:605553 neXtProt:NX_P51003 PharmGKB:PA32932 InParanoid:P51003
OrthoDB:EOG4J6RQB PhylomeDB:P51003 ChiTaRS:PAPOLA GenomeRNAi:10914
NextBio:41453 ArrayExpress:P51003 Bgee:P51003 CleanEx:HS_PAPOLA
Genevestigator:P51003 GermOnline:ENSG00000090060 Uniprot:P51003
Length = 745
Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
Identities = 196/446 (43%), Positives = 273/446 (61%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHV 446
K+ + D+ ++ F V
Sbjct: 443 FKK-TENSENLSVDLTYDIQSFTDTV 467
>UNIPROTKB|F1SAQ7 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 EMBL:CT827800
Ensembl:ENSSSCT00000002783 Uniprot:F1SAQ7
Length = 693
Score = 938 (335.3 bits), Expect = 3.0e-94, P = 3.0e-94
Identities = 196/446 (43%), Positives = 273/446 (61%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHV 446
K+ + D+ ++ F V
Sbjct: 443 FKK-TENSENLSVDLTYDIQSFTDTV 467
>UNIPROTKB|I3L6F0 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 OMA:SPVTTQG EMBL:CT827800
Ensembl:ENSSSCT00000027948 Uniprot:I3L6F0
Length = 734
Score = 938 (335.3 bits), Expect = 3.0e-94, P = 3.0e-94
Identities = 196/446 (43%), Positives = 273/446 (61%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 42 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 101
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 102 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 159
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 160 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 219
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 220 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 279
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 280 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 339
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 340 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 399
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 400 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 458
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHV 446
K+ + D+ ++ F V
Sbjct: 459 FKK-TENSENLSVDLTYDIQSFTDTV 483
>MGI|MGI:109301 [details] [associations]
symbol:Papola "poly (A) polymerase alpha" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IBA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0006369 "termination of
RNA polymerase II transcription" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
MGI:MGI:109301 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0000287 GO:GO:0006378 GO:GO:0003723 GO:GO:0030145
GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376 eggNOG:COG5186
Gene3D:3.30.70.590 SUPFAM:SSF55003 CTD:10914
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 OMA:SPVTTQG OrthoDB:EOG4J6RQB ChiTaRS:PAPOLA
EMBL:U52197 EMBL:U58134 EMBL:U58135 EMBL:AB086650 IPI:IPI00224655
IPI:IPI00224656 IPI:IPI00266738 IPI:IPI00467146 RefSeq:NP_035242.1
UniGene:Mm.255877 ProteinModelPortal:Q61183 SMR:Q61183
STRING:Q61183 PhosphoSite:Q61183 PaxDb:Q61183 PRIDE:Q61183
DNASU:18789 Ensembl:ENSMUST00000021535 Ensembl:ENSMUST00000109901
Ensembl:ENSMUST00000166735 GeneID:18789 KEGG:mmu:18789
UCSC:uc007oyv.1 UCSC:uc007oyx.1 InParanoid:Q61183 NextBio:295064
Bgee:Q61183 CleanEx:MM_PAPOLA Genevestigator:Q61183
GermOnline:ENSMUSG00000021111 Uniprot:Q61183
Length = 739
Score = 931 (332.8 bits), Expect = 1.6e-93, P = 1.6e-93
Identities = 184/385 (47%), Positives = 252/385 (65%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERD 388
+W G VES++R L+ +E++
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKN 408
>ZFIN|ZDB-GENE-030131-3507 [details] [associations]
symbol:papola "poly(A) polymerase alpha"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA;IBA]
[GO:0005634 "nucleus" evidence=IEA;IBA] [GO:0031123 "RNA 3'-end
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0006378 "mRNA polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 ZFIN:ZDB-GENE-030131-3507 GO:GO:0005634
GO:GO:0005737 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 EMBL:AL953887 KO:K14376 Gene3D:3.30.70.590
SUPFAM:SSF55003 CTD:10914 GeneTree:ENSGT00390000017928
HOGENOM:HOG000204376 HOVERGEN:HBG053502 IPI:IPI00860939
RefSeq:NP_991321.2 UniGene:Dr.25690 SMR:Q5SNY2
Ensembl:ENSDART00000053858 GeneID:404041 KEGG:dre:404041
NextBio:20817515 Uniprot:Q5SNY2
Length = 723
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 204/493 (41%), Positives = 289/493 (58%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D++ T++L + L +F E E R+ VLG+L+ +VK WI+ V+ K I
Sbjct: 25 ISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIREVSEAKNI 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
I K+FTFGSYRLGV DIDALCV P + R DFF + L+E V
Sbjct: 85 P-ASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-TDFFSSFYEKLKEQEEV 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPE+LD D LL NLD + + SLNG
Sbjct: 143 KDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR DR HLMPIITP+YP
Sbjct: 263 VAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T IM EEF+R + +EI K W LFE +FF +K+Y+ + +A+
Sbjct: 323 NSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKYKHYIVLLASAQT 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + +PG E + K + +G+
Sbjct: 383 EKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPGP-KEGNDKEEFSTMWVIGIV 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWK---QGMQIHVSHLRCQDIPDFVFPGG 477
K+ + + D+ ++ F V + K Q M+I H++ + + +
Sbjct: 442 FKK-MEGSENLNVDLTFDIQSFTDTVYRQAITSKMFEQDMKITAMHVKRKQLHQLL---- 496
Query: 478 VRPPKSLNEKKRK 490
P +++ KRK
Sbjct: 497 --PEVAIHRSKRK 507
>WB|WBGene00011791 [details] [associations]
symbol:T15H9.6 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 EMBL:Z47356 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
PIR:T24943 RefSeq:NP_496067.1 ProteinModelPortal:Q09995 SMR:Q09995
STRING:Q09995 EnsemblMetazoa:T15H9.6 GeneID:174513
KEGG:cel:CELE_T15H9.6 UCSC:T15H9.6 CTD:174513 WormBase:T15H9.6
InParanoid:Q09995 OMA:PFGSYRL NextBio:884348 Uniprot:Q09995
Length = 554
Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
Identities = 193/477 (40%), Positives = 295/477 (61%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ P DV T L+ L + K F S++E+L R++VL LDG+VKDW+++ T+ +
Sbjct: 20 ISTAFPKANDVALTSSLQSSLEEFKSFESKQETLLRIKVLKNLDGLVKDWVQKTTISR-- 77
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
++Q+ A KL FGSYRLGV DID++ V P + TR DFF +L + P V
Sbjct: 78 IPKDQMFNAGGKLIPFGSYRLGVHSSGADIDSIVVAPRHITR-SDFFNSFKDILAKNPEV 136
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V A VP++ K++GV +D+L+A+L +PEDL+ L DSLL NLDE++V SLNG
Sbjct: 137 TELCAVEKAFVPIMTLKYSGVDIDILFARLALKSVPEDLNILDDSLLKNLDEESVRSLNG 196
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV +++L LVP+ +NF TLR ++ WAK GIYSN+MGF GGI WA+LVAR+CQLYPNA
Sbjct: 197 CRVAEQLLKLVPHQKNFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVARICQLYPNA 256
Query: 244 LPNVLVSRFFKIFAHWKWPNPVML----CPIQYQAMPHH-VWDPRSNQRDRKHLMPIITP 298
P+ L+ + F IF+ W WP PV+L C A + VWDPR N DR HLMPIITP
Sbjct: 257 APSRLIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHADRYHLMPIITP 316
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIH 358
++P NS++NVS ++++++Q+E ++A +C++I G W L E +FF + +++ +
Sbjct: 317 AFPQQNSTHNVSRSSMKVIQDEMKKALIICDKIHEGTLEWRDLLEEINFFSKYHHFIALK 376
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQ-CRLYPGDFSENSVKSSSQCHYFM 417
+ A++ + + G+ ESR+RQL+ ++E++ V+Q ++ P F + VK + +F+
Sbjct: 377 LKAESVKEELAFGGFFESRIRQLVQILEKNQ--VIQVAQINPRKFKD--VKDPKKSIWFI 432
Query: 418 GLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVF 474
GL V + D+ +++FK ++ +Q M + CQ DF +
Sbjct: 433 GLEFVANV-----KNVDLTSDIQQFKMNID------RQSMSVKEIAAGCQVETDFTY 478
>UNIPROTKB|Q09995 [details] [associations]
symbol:T15H9.6 "Protein T15H9.6" species:6239
"Caenorhabditis elegans" [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 EMBL:Z47356 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
PIR:T24943 RefSeq:NP_496067.1 ProteinModelPortal:Q09995 SMR:Q09995
STRING:Q09995 EnsemblMetazoa:T15H9.6 GeneID:174513
KEGG:cel:CELE_T15H9.6 UCSC:T15H9.6 CTD:174513 WormBase:T15H9.6
InParanoid:Q09995 OMA:PFGSYRL NextBio:884348 Uniprot:Q09995
Length = 554
Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
Identities = 193/477 (40%), Positives = 295/477 (61%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ P DV T L+ L + K F S++E+L R++VL LDG+VKDW+++ T+ +
Sbjct: 20 ISTAFPKANDVALTSSLQSSLEEFKSFESKQETLLRIKVLKNLDGLVKDWVQKTTISR-- 77
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
++Q+ A KL FGSYRLGV DID++ V P + TR DFF +L + P V
Sbjct: 78 IPKDQMFNAGGKLIPFGSYRLGVHSSGADIDSIVVAPRHITR-SDFFNSFKDILAKNPEV 136
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V A VP++ K++GV +D+L+A+L +PEDL+ L DSLL NLDE++V SLNG
Sbjct: 137 TELCAVEKAFVPIMTLKYSGVDIDILFARLALKSVPEDLNILDDSLLKNLDEESVRSLNG 196
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV +++L LVP+ +NF TLR ++ WAK GIYSN+MGF GGI WA+LVAR+CQLYPNA
Sbjct: 197 CRVAEQLLKLVPHQKNFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVARICQLYPNA 256
Query: 244 LPNVLVSRFFKIFAHWKWPNPVML----CPIQYQAMPHH-VWDPRSNQRDRKHLMPIITP 298
P+ L+ + F IF+ W WP PV+L C A + VWDPR N DR HLMPIITP
Sbjct: 257 APSRLIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHADRYHLMPIITP 316
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIH 358
++P NS++NVS ++++++Q+E ++A +C++I G W L E +FF + +++ +
Sbjct: 317 AFPQQNSTHNVSRSSMKVIQDEMKKALIICDKIHEGTLEWRDLLEEINFFSKYHHFIALK 376
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQ-CRLYPGDFSENSVKSSSQCHYFM 417
+ A++ + + G+ ESR+RQL+ ++E++ V+Q ++ P F + VK + +F+
Sbjct: 377 LKAESVKEELAFGGFFESRIRQLVQILEKNQ--VIQVAQINPRKFKD--VKDPKKSIWFI 432
Query: 418 GLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVF 474
GL V + D+ +++FK ++ +Q M + CQ DF +
Sbjct: 433 GLEFVANV-----KNVDLTSDIQQFKMNID------RQSMSVKEIAAGCQVETDFTY 478
>UNIPROTKB|I3LRR6 [details] [associations]
symbol:PAPOLB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005783 GO:GO:0005634 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 OMA:FPGGVAW EMBL:CU928347
Ensembl:ENSSSCT00000031977 Uniprot:I3LRR6
Length = 636
Score = 925 (330.7 bits), Expect = 7.0e-93, P = 7.0e-93
Identities = 205/499 (41%), Positives = 291/499 (58%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D + T++L + L +F EEE R+ +L +L+ +VK+WI+ ++ K +
Sbjct: 40 ISLAPPRETDCVLTQKLIETLKPFGVFEEEEELQRRILILEKLNYLVKEWIRELSESKSL 99
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 100 P-QAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLHEEV 157
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 158 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 217
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 218 CRVTDEILHLVPNIDNFRLTLRAVKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 277
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 278 IASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 337
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 338 NSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIALLASAPT 397
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFS---ENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F E+ K + + +GL
Sbjct: 398 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPRESPDKEEFRTMWVIGLV 456
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ P++ + + LT ++ F V + K M+I HLR +++ + P
Sbjct: 457 LKR---PENSDILSIDLTYDIQSFTDTVYRQAVNSKMFEMDMKIAAMHLRRKELHQLL-P 512
Query: 476 GGVRPPKSLNEKKRKRIEV 494
V P K + V
Sbjct: 513 NHVLPQKKTPSHSEDSVSV 531
>WB|WBGene00009658 [details] [associations]
symbol:F43G6.5 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
OMA:FPGGVAW HSSP:P25500 EMBL:Z50070 EMBL:AL032651 PIR:C88325
PIR:T22140 RefSeq:NP_496524.1 ProteinModelPortal:G5EBX5 SMR:G5EBX5
EnsemblMetazoa:F43G6.5 GeneID:174816 KEGG:cel:CELE_F43G6.5
CTD:174816 WormBase:F43G6.5 NextBio:885628 Uniprot:G5EBX5
Length = 554
Score = 922 (329.6 bits), Expect = 1.5e-92, P = 1.5e-92
Identities = 189/456 (41%), Positives = 280/456 (61%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ P D+ T L+K L + +EE+ RV+VL +L+G VK WI+++T +
Sbjct: 25 ISTALPNAKDLELTSSLQKTLNQYNSYEPQEETSQRVKVLQKLNGCVKQWIQKITEARYP 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
D Q+ A +L FGSYRLGV DID L + P +ATR D FF +ML + P V
Sbjct: 85 KD--QLFNAGGQLMAFGSYRLGVHSSGADIDTLVLAPRHATRAD-FFSSFKQMLAKDPEV 141
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V +A VP++ K++G+ +D L+A+L +PEDLD L D+LL NLD+++V SLNG
Sbjct: 142 TNLCAVENAFVPIMTMKYSGIEIDFLFARLALKEVPEDLDILDDALLKNLDQESVRSLNG 201
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV + +L LVPN NF TLR ++ WAK GIYSN+MGF GGI WA+LVAR CQLYPNA
Sbjct: 202 CRVAENLLKLVPNQENFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQLYPNA 261
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMP-----HHVWDPRSNQRDRKHLMPIITP 298
P+ L+ + F IF+ WKWP PV+L I M VWDPR NQ DR HLMPI+TP
Sbjct: 262 SPSKLIQKVFFIFSTWKWPAPVLLDFISSDRMDLAQLNQLVWDPRRNQSDRYHLMPIVTP 321
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIH 358
++P NS++NVS ++++++QEE + A C+ I+ G W+ L E +FF +K+++ +
Sbjct: 322 AFPQQNSTHNVSRSSMKVIQEEMKDALITCDNIQNGSCNWMDLLEEINFFSRYKHFISLS 381
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMG 418
+ A+ D + G+ ESR+RQL+ ++E++ G + + P F + K + +F+G
Sbjct: 382 MTAETEKDELAFGGFFESRIRQLVLILEKNQG-IKLAHINPKKFK--AAKDPKKSVWFIG 438
Query: 419 LGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWK 454
L + V + D+ +++FK ++ + S K
Sbjct: 439 LQFDENV-----KNLDLTKDIQQFKRNIDYQAKSVK 469
>RGD|1310946 [details] [associations]
symbol:Papolb "poly (A) polymerase beta (testis specific)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=ISO] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1310946 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 EMBL:CH474012 GO:GO:0004652 GO:GO:0043631 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOVERGEN:HBG053502 CTD:56903
EMBL:BC079046 IPI:IPI00363752 RefSeq:NP_001012020.1
UniGene:Rn.210888 SMR:Q6AYH1 GeneID:304300 KEGG:rno:304300
UCSC:RGD:1310946 NextBio:652828 Genevestigator:Q6AYH1
Uniprot:Q6AYH1
Length = 642
Score = 921 (329.3 bits), Expect = 1.9e-92, P = 1.9e-92
Identities = 205/500 (41%), Positives = 294/500 (58%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D T++L + L +F EEE R+ +L +L+ +VK+WI+ ++ + +
Sbjct: 27 ISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIREISESRNL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R+D FF + L+ V
Sbjct: 87 P-QAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRND-FFTSFYDKLKLQEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI +FR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 265 IASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 325 NSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPT 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENVDKEEFRTMWVIGLV 443
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ P++ E + LT ++ F V + K M+I HLR +++ + P
Sbjct: 444 LKK---PENSEILSIDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHLRRKELHQLL-P 499
Query: 476 GGVRPPKSLNEKKRKRIEVI 495
V K + + R+ +
Sbjct: 500 NHVLQKKETHLTEGVRLTAV 519
>MGI|MGI:1932115 [details] [associations]
symbol:Papolb "poly (A) polymerase beta (testis specific)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISS;ISA;IBA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IPI] [GO:0006369 "termination of RNA polymerase
II transcription" evidence=IBA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 MGI:MGI:1932115 GO:GO:0005783
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 GO:GO:0043631 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
HOVERGEN:HBG053502 CTD:56903 OMA:FPGGVAW OrthoDB:EOG4THVSN
EMBL:AF039957 EMBL:AB030729 IPI:IPI00230087 RefSeq:NP_064327.1
UniGene:Mm.441372 ProteinModelPortal:Q9WVP6 SMR:Q9WVP6
MINT:MINT-6167909 STRING:Q9WVP6 PhosphoSite:Q9WVP6 PaxDb:Q9WVP6
PRIDE:Q9WVP6 GeneID:56522 KEGG:mmu:56522 InParanoid:Q9WVP6
NextBio:312850 Bgee:Q9WVP6 CleanEx:MM_PAPOLB Genevestigator:Q9WVP6
Uniprot:Q9WVP6
Length = 641
Score = 919 (328.6 bits), Expect = 3.0e-92, P = 3.0e-92
Identities = 204/500 (40%), Positives = 294/500 (58%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D T++L + L +F EEE R+ +L +L+ +VK+WI+ ++ + +
Sbjct: 26 ISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIREISESRNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R+D FF + L+ V
Sbjct: 86 P-QAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRND-FFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI +FR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F E + K + + +GL
Sbjct: 384 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKETADKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ P++ E + LT ++ F V + K M+I HLR +++ + P
Sbjct: 443 LKK---PENSEILSIDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHLRRKELHQLL-P 498
Query: 476 GGVRPPKSLNEKKRKRIEVI 495
V K + + R+ +
Sbjct: 499 NHVLQKKETHLTESVRLTAV 518
>FB|FBgn0015949 [details] [associations]
symbol:hrg "hiiragi" species:7227 "Drosophila melanogaster"
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IDA;NAS] [GO:0006378 "mRNA polyadenylation"
evidence=ISS;IBA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HSSP:P25500 EMBL:AY113434 ProteinModelPortal:Q8MZ09
SMR:Q8MZ09 STRING:Q8MZ09 PaxDb:Q8MZ09 PRIDE:Q8MZ09
FlyBase:FBgn0015949 InParanoid:Q8MZ09 OrthoDB:EOG42547T ChiTaRS:HRG
ArrayExpress:Q8MZ09 Bgee:Q8MZ09 Uniprot:Q8MZ09
Length = 659
Score = 918 (328.2 bits), Expect = 3.9e-92, P = 3.9e-92
Identities = 177/385 (45%), Positives = 249/385 (64%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T EL L +F S++E R+E+L +L+ +VK W+K +++ K +
Sbjct: 34 ISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLVKQWVKEISVSKNM 93
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ K++TFGSYRLGV DIDALCV P R D+F F +L++ P V
Sbjct: 94 P-ESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIER-TDYFQSFFEVLKKQPEV 151
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ V +A VPVIK F+G+ +DLL+A+L IP+D D D+LL NLD ++V SLNG
Sbjct: 152 TECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNG 211
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL+LVPNI NFR LR ++ WAK+ GIYSN++G+ GG+ WA+LVAR CQLYPNA
Sbjct: 212 CRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNA 271
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
LV +FF +F+ WKWPNPV+L + VWDPR N DR HLMPIITP+YP
Sbjct: 272 AAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQ 331
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T +++ EF R + +EI G+ W LFE FF +++++ + + ++
Sbjct: 332 NSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQT 391
Query: 364 AGDFRQWKGWVESRLRQLIHMIERD 388
A D +W G VES++R LI +ER+
Sbjct: 392 ADDHLEWCGLVESKVRLLISNLERN 416
>UNIPROTKB|F1NL95 [details] [associations]
symbol:F1NL95 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008811
"chloramphenicol O-acetyltransferase activity" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] InterPro:IPR001707
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 ProDom:PD002660 GO:GO:0005634
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
GO:GO:0008811 EMBL:AADN02046885 EMBL:AADN02046884 IPI:IPI00600779
Ensembl:ENSGALT00000012751 OMA:RYHVMPI Uniprot:F1NL95
Length = 748
Score = 897 (320.8 bits), Expect = 6.5e-90, P = 6.5e-90
Identities = 183/447 (40%), Positives = 274/447 (61%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + + +F EEE R+ VL +L+ +VK+WI + K +
Sbjct: 25 ISLAPPKDIDYIHTQKLVEAMESFGVFEDEEELNHRLVVLCKLNNLVKEWIFELGESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
++ ++FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 PPSV-VENVGGRIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQEEI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
++L V DA VPV+KF+F+G+ +DL++A+L + ++LD DS L +LD + + SLNG
Sbjct: 143 KNLRAVEDAYVPVVKFEFDGIEIDLVFARLPVQTVSDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN NF+ TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQL+PNA
Sbjct: 203 CRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLHPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
L + LV +FF IF+ W+WPNPV+L + + VWDPR N DR H+MPIITP+YP
Sbjct: 263 LASTLVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T ++ EE + + EI G+ W LFE +FF +K+Y+ + +
Sbjct: 323 NSTYNVSTSTRAVVVEELKHGLAVTNEILQGRSDWPKLFEQPNFFQKYKHYIVLTASTYT 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIER-DMGGVLQC--RLYPGDFSENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +ER + + + +PG+ E+ +S +F+G+
Sbjct: 383 EEHHLEWVGLVESKIRVLVGNLERNEFINIAHVNPQSFPGN-QEHCKQSRYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVV 447
++ + + K D+ ++ F V+
Sbjct: 442 FRK-LESAESTKIDLTYDIQSFTDAVI 467
>UNIPROTKB|F1P3A1 [details] [associations]
symbol:F1P3A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008811 "chloramphenicol
O-acetyltransferase activity" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR001707
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 ProDom:PD002660 GO:GO:0005634
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
GO:GO:0008811 EMBL:AADN02046885 EMBL:AADN02046884 IPI:IPI00820385
Ensembl:ENSGALT00000040310 Uniprot:F1P3A1
Length = 738
Score = 897 (320.8 bits), Expect = 6.5e-90, P = 6.5e-90
Identities = 183/447 (40%), Positives = 274/447 (61%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + + +F EEE R+ VL +L+ +VK+WI + K +
Sbjct: 25 ISLAPPKDIDYIHTQKLVEAMESFGVFEDEEELNHRLVVLCKLNNLVKEWIFELGESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
++ ++FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 PPSV-VENVGGRIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQEEI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
++L V DA VPV+KF+F+G+ +DL++A+L + ++LD DS L +LD + + SLNG
Sbjct: 143 KNLRAVEDAYVPVVKFEFDGIEIDLVFARLPVQTVSDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN NF+ TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQL+PNA
Sbjct: 203 CRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLHPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
L + LV +FF IF+ W+WPNPV+L + + VWDPR N DR H+MPIITP+YP
Sbjct: 263 LASTLVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T ++ EE + + EI G+ W LFE +FF +K+Y+ + +
Sbjct: 323 NSTYNVSTSTRAVVVEELKHGLAVTNEILQGRSDWPKLFEQPNFFQKYKHYIVLTASTYT 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIER-DMGGVLQC--RLYPGDFSENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +ER + + + +PG+ E+ +S +F+G+
Sbjct: 383 EEHHLEWVGLVESKIRVLVGNLERNEFINIAHVNPQSFPGN-QEHCKQSRYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVV 447
++ + + K D+ ++ F V+
Sbjct: 442 FRK-LESAESTKIDLTYDIQSFTDAVI 467
>POMBASE|SPBC646.04 [details] [associations]
symbol:pla1 "poly(A) polymerase Pla1" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IGI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IGI] [GO:0006378 "mRNA polyadenylation"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 PomBase:SPBC646.04 GO:GO:0005829
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0006378
GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0005847
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 OMA:FPGGVAW EMBL:X79705
EMBL:AB027883 PIR:JC6058 RefSeq:NP_595362.1
ProteinModelPortal:Q10295 SMR:Q10295 MINT:MINT-2730388
STRING:Q10295 EnsemblFungi:SPBC646.04.1 GeneID:2541099
KEGG:spo:SPBC646.04 OrthoDB:EOG4SR150 NextBio:20802212
Uniprot:Q10295
Length = 566
Score = 863 (308.9 bits), Expect = 1.5e-89, Sum P(2) = 1.5e-89
Identities = 172/383 (44%), Positives = 250/383 (65%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ T + L L ++ LF S ES RV+VL L I +++K+V++ K +
Sbjct: 12 ISTAPATEQENALNTALINELKNQNLFESPAESEKRVKVLDELQQITTEFVKKVSLAKHM 71
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ E+ EA K+FT+GSYRLGV GP +DID L V P + +R D+FF L ML+E V
Sbjct: 72 N-EKMANEAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVSR-DNFFQDLEPMLREREEV 129
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
DL VPDA VP+IKFKF G+S+DL++A+L +P DL+ ++LL ++E+ VLSLNG
Sbjct: 130 TDLAAVPDAYVPIIKFKFLGISIDLIFARLSVPRVPRDLELSDNNLLKGVEERCVLSLNG 189
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD+IL LVPN F+ LR ++FWA+RR IY+N +GF GG+ WA++VAR+CQLYPNA
Sbjct: 190 TRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVARICQLYPNA 249
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ +V+V++FF+I W WP P++L PI+ + +W+P+ D+ H MPIITP+YP
Sbjct: 250 VSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMPIITPAYPSM 309
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++N++ +T I+ E RA E+ ++I W LF+ + FF +K+YL I AAK
Sbjct: 310 CATHNITLSTQTIILREMVRAGEIADQIMVKALPWSALFQKHDFFHRYKHYLTITAAAKT 369
Query: 364 AGDFRQWKGWVESRLRQLIHMIE 386
A +W G VES+LR L+ +E
Sbjct: 370 AEAQLKWAGLVESKLRHLVTRLE 392
Score = 50 (22.7 bits), Expect = 1.5e-89, Sum P(2) = 1.5e-89
Identities = 24/95 (25%), Positives = 43/95 (45%)
Query: 401 DFSENSVKS-----SSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQ 455
D SEN K ++ C+ + L +K+G P ++ D+ +EF + + +
Sbjct: 458 DGSENGEKQIFPVYTTTCYIGLELEKKKG-HPI--KRLDISWPTQEFYE-LCKKWDKYDD 513
Query: 456 G-MQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKR 489
M + + + + +PD VF G PK+ KKR
Sbjct: 514 TLMNVFIKNTKNTALPDEVFEPGEERPKAT--KKR 546
>CGD|CAL0002451 [details] [associations]
symbol:PAP1 species:5476 "Candida albicans" [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISS;IDA]
[GO:0044011 "single-species biofilm formation on inanimate
substrate" evidence=IMP] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=IDA] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=IEA] [GO:0071050 "snoRNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 CGD:CAL0002451 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 EMBL:AACQ01000100 GO:GO:0044011 GO:GO:0004652
KO:K14376 EMBL:AF167162 EMBL:AB021667 RefSeq:XP_714613.1
ProteinModelPortal:Q9UW26 STRING:Q9UW26 GeneID:3643763
KEGG:cal:CaO19.3197 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 Uniprot:Q9UW26
Length = 555
Score = 831 (297.6 bits), Expect = 1.5e-87, Sum P(2) = 1.5e-87
Identities = 172/410 (41%), Positives = 257/410 (62%)
Query: 20 LEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTF 79
L K L F SE + RVEVL L + ++++ +V++ K IS E ++ K+FTF
Sbjct: 28 LIKELKSRGSFESETATKKRVEVLNILQSMTEEFVYKVSIKKNIS-EGMARDVGGKIFTF 86
Query: 80 GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKF 139
GSYRLGV GP +DID L V P + +R+D FF + +L+ +E++ PVPDA VP+IK
Sbjct: 87 GSYRLGVYGPGSDIDTLVVVPKHVSRND-FFEVFYELLKGRSELEEIAPVPDAFVPIIKI 145
Query: 140 KFNGVSVDLLYAQLQFSVIPEDLDSLQD-SLLHNLDEQTVLSLNGCRVTDRILSLVPNIR 198
+F G+S+DL++A+L +P DL +L D +LL N+DE+ + +LNG RVTD IL LVP
Sbjct: 146 EFAGISIDLIFARLDIPRVPRDL-TLDDKNLLKNIDEKDLRALNGTRVTDEILQLVPKPT 204
Query: 199 NFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAH 258
F+ LRC++ WA++R +Y N GF GG+ WA+LVAR+CQLYPNA+ V+V +FF I++
Sbjct: 205 VFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSAVIVEKFFHIYSQ 264
Query: 259 WKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQ 318
W WP PV+L I+ + VW+PR DR+H MP+ITP+YP +++N++S+T +++
Sbjct: 265 WAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITPAYPSMCATHNITSSTQKVIL 324
Query: 319 EEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNA-GDFRQWKGWVESR 377
EFQR EL +I GK++W L E + FF +K YL I A ++ + ++ G VES+
Sbjct: 325 SEFQRGIELMNDINVGKKSWSDLLERHDFFFRYKFYLCIVAATRSTYAEHLKYSGMVESK 384
Query: 378 LRQLIHMIERDMGGVLQCRLYPGDFSENSV--KSSSQCHYFMGL-GRKQG 424
LR L+ +E + G+ Y F EN ++ + H M L G +G
Sbjct: 385 LRLLVQKLEL-VEGIELAHPYVKSF-ENGYYCDNAEEAHEIMNLYGTSKG 432
Score = 63 (27.2 bits), Expect = 1.5e-87, Sum P(2) = 1.5e-87
Identities = 25/102 (24%), Positives = 49/102 (48%)
Query: 391 GVLQCRLYPGDFSENSVKSSSQCHYF-MGLGRKQGVSPQDGEKFDMRLTVEEFKSHVV-W 448
GVL D ++ +V++ + H + +G K +S + +K D++ EF + W
Sbjct: 438 GVLHAE--NNDNNKENVENKVELHMTKLFIGLKLDLSKEGEKKLDIQYPCAEFFNICKGW 495
Query: 449 M-YSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKR 489
+ S K +QI +++ D+ D V+ G P + ++KR
Sbjct: 496 QDFDSEKHFIQI--KNVKLYDLSDDVYVDGETRPIKIAKRKR 535
>UNIPROTKB|Q9UW26 [details] [associations]
symbol:PAPA "Poly(A) polymerase PAPa" species:237561
"Candida albicans SC5314" [GO:0003723 "RNA binding" evidence=IDA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IDA] [GO:0006378 "mRNA polyadenylation" evidence=IDA]
[GO:0044011 "single-species biofilm formation on inanimate
substrate" evidence=IMP] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
CGD:CAL0002451 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 EMBL:AACQ01000100
GO:GO:0044011 GO:GO:0004652 KO:K14376 EMBL:AF167162 EMBL:AB021667
RefSeq:XP_714613.1 ProteinModelPortal:Q9UW26 STRING:Q9UW26
GeneID:3643763 KEGG:cal:CaO19.3197 eggNOG:COG5186
Gene3D:3.30.70.590 SUPFAM:SSF55003 Uniprot:Q9UW26
Length = 555
Score = 831 (297.6 bits), Expect = 1.5e-87, Sum P(2) = 1.5e-87
Identities = 172/410 (41%), Positives = 257/410 (62%)
Query: 20 LEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTF 79
L K L F SE + RVEVL L + ++++ +V++ K IS E ++ K+FTF
Sbjct: 28 LIKELKSRGSFESETATKKRVEVLNILQSMTEEFVYKVSIKKNIS-EGMARDVGGKIFTF 86
Query: 80 GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKF 139
GSYRLGV GP +DID L V P + +R+D FF + +L+ +E++ PVPDA VP+IK
Sbjct: 87 GSYRLGVYGPGSDIDTLVVVPKHVSRND-FFEVFYELLKGRSELEEIAPVPDAFVPIIKI 145
Query: 140 KFNGVSVDLLYAQLQFSVIPEDLDSLQD-SLLHNLDEQTVLSLNGCRVTDRILSLVPNIR 198
+F G+S+DL++A+L +P DL +L D +LL N+DE+ + +LNG RVTD IL LVP
Sbjct: 146 EFAGISIDLIFARLDIPRVPRDL-TLDDKNLLKNIDEKDLRALNGTRVTDEILQLVPKPT 204
Query: 199 NFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAH 258
F+ LRC++ WA++R +Y N GF GG+ WA+LVAR+CQLYPNA+ V+V +FF I++
Sbjct: 205 VFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSAVIVEKFFHIYSQ 264
Query: 259 WKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQ 318
W WP PV+L I+ + VW+PR DR+H MP+ITP+YP +++N++S+T +++
Sbjct: 265 WAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITPAYPSMCATHNITSSTQKVIL 324
Query: 319 EEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNA-GDFRQWKGWVESR 377
EFQR EL +I GK++W L E + FF +K YL I A ++ + ++ G VES+
Sbjct: 325 SEFQRGIELMNDINVGKKSWSDLLERHDFFFRYKFYLCIVAATRSTYAEHLKYSGMVESK 384
Query: 378 LRQLIHMIERDMGGVLQCRLYPGDFSENSV--KSSSQCHYFMGL-GRKQG 424
LR L+ +E + G+ Y F EN ++ + H M L G +G
Sbjct: 385 LRLLVQKLEL-VEGIELAHPYVKSF-ENGYYCDNAEEAHEIMNLYGTSKG 432
Score = 63 (27.2 bits), Expect = 1.5e-87, Sum P(2) = 1.5e-87
Identities = 25/102 (24%), Positives = 49/102 (48%)
Query: 391 GVLQCRLYPGDFSENSVKSSSQCHYF-MGLGRKQGVSPQDGEKFDMRLTVEEFKSHVV-W 448
GVL D ++ +V++ + H + +G K +S + +K D++ EF + W
Sbjct: 438 GVLHAE--NNDNNKENVENKVELHMTKLFIGLKLDLSKEGEKKLDIQYPCAEFFNICKGW 495
Query: 449 M-YSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKR 489
+ S K +QI +++ D+ D V+ G P + ++KR
Sbjct: 496 QDFDSEKHFIQI--KNVKLYDLSDDVYVDGETRPIKIAKRKR 535
>WB|WBGene00012528 [details] [associations]
symbol:pap-1 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0007276 "gamete generation" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0006378
GO:GO:0010171 GO:GO:0040011 GO:GO:0048477 GO:GO:0006351
GO:GO:0003723 GO:GO:0040035 GO:GO:0040027 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
EMBL:AL021474 PIR:G89189 RefSeq:NP_505683.1
ProteinModelPortal:Q9U2P3 SMR:Q9U2P3 STRING:Q9U2P3 PaxDb:Q9U2P3
EnsemblMetazoa:Y32F6A.3.1 EnsemblMetazoa:Y32F6A.3.2 GeneID:179458
KEGG:cel:CELE_Y32F6A.3 UCSC:Y32F6A.3 CTD:179458 WormBase:Y32F6A.3
InParanoid:Q9U2P3 OMA:CEALEIC NextBio:905480 Uniprot:Q9U2P3
Length = 655
Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
Identities = 173/390 (44%), Positives = 244/390 (62%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T L + L + +EE+ R+EVL L+ +VK+W+K VT K I
Sbjct: 18 ISLAHPDSKDIAQTTLLIETLKKFGSYEPKEETEQRMEVLRNLNRLVKEWVKNVTAMK-I 76
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ E + A KLFTFGSYRLGV DID L V P + R DFF ML P V
Sbjct: 77 PNGEGVN-AGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDR-SDFFTSFKEMLNNDPNV 134
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V +A VPV+K K++GV +D+L+A+L +P+ + D+LL NLD+++V SLNG
Sbjct: 135 TELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDNLLRNLDQESVRSLNG 194
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV +++L LVP + F TLR ++ WAK GIYSN+MGF GGI WA+LVAR CQLYPNA
Sbjct: 195 CRVAEQLLKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQLYPNA 254
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA--MP---HHVWDPRSNQRDRKHLMPIITP 298
P+ LV R F IF+ W WP+PV+L + +P VWDPR DR H+MPIITP
Sbjct: 255 SPSRLVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVMPIITP 314
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIH 358
++P NS++NV+ +T +++ E A E+C +I GK W LFE +FF +K+++ +
Sbjct: 315 AFPEQNSTHNVTRSTATVIKNEICEALEICRDISEGKSKWTALFEEVNFFSRYKHFIALI 374
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERD 388
+AA N + + G++ESR+R L+ +ER+
Sbjct: 375 MAAPNEEEELNYGGFLESRIRLLVQSLERN 404
>UNIPROTKB|Q9U2P3 [details] [associations]
symbol:pap-1 "Protein PAP-1" species:6239 "Caenorhabditis
elegans" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0040010 GO:GO:0006915 GO:GO:0002119
GO:GO:0006378 GO:GO:0010171 GO:GO:0040011 GO:GO:0048477
GO:GO:0006351 GO:GO:0003723 GO:GO:0040035 GO:GO:0040027
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HSSP:P25500 EMBL:AL021474 PIR:G89189 RefSeq:NP_505683.1
ProteinModelPortal:Q9U2P3 SMR:Q9U2P3 STRING:Q9U2P3 PaxDb:Q9U2P3
EnsemblMetazoa:Y32F6A.3.1 EnsemblMetazoa:Y32F6A.3.2 GeneID:179458
KEGG:cel:CELE_Y32F6A.3 UCSC:Y32F6A.3 CTD:179458 WormBase:Y32F6A.3
InParanoid:Q9U2P3 OMA:CEALEIC NextBio:905480 Uniprot:Q9U2P3
Length = 655
Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
Identities = 173/390 (44%), Positives = 244/390 (62%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T L + L + +EE+ R+EVL L+ +VK+W+K VT K I
Sbjct: 18 ISLAHPDSKDIAQTTLLIETLKKFGSYEPKEETEQRMEVLRNLNRLVKEWVKNVTAMK-I 76
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ E + A KLFTFGSYRLGV DID L V P + R DFF ML P V
Sbjct: 77 PNGEGVN-AGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDR-SDFFTSFKEMLNNDPNV 134
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V +A VPV+K K++GV +D+L+A+L +P+ + D+LL NLD+++V SLNG
Sbjct: 135 TELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDNLLRNLDQESVRSLNG 194
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV +++L LVP + F TLR ++ WAK GIYSN+MGF GGI WA+LVAR CQLYPNA
Sbjct: 195 CRVAEQLLKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQLYPNA 254
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA--MP---HHVWDPRSNQRDRKHLMPIITP 298
P+ LV R F IF+ W WP+PV+L + +P VWDPR DR H+MPIITP
Sbjct: 255 SPSRLVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVMPIITP 314
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIH 358
++P NS++NV+ +T +++ E A E+C +I GK W LFE +FF +K+++ +
Sbjct: 315 AFPEQNSTHNVTRSTATVIKNEICEALEICRDISEGKSKWTALFEEVNFFSRYKHFIALI 374
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERD 388
+AA N + + G++ESR+R L+ +ER+
Sbjct: 375 MAAPNEEEELNYGGFLESRIRLLVQSLERN 404
>SGD|S000001710 [details] [associations]
symbol:PAP1 "Poly(A) polymerase, one of three factors
required for mRNA 3'-end pol" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA;IDA] [GO:0006378 "mRNA polyadenylation"
evidence=IDA;IMP] [GO:0005654 "nucleoplasm" evidence=IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071050 "snoRNA polyadenylation"
evidence=IGI] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 SGD:S000001710 GO:GO:0005524
GO:GO:0000287 GO:GO:0006378 GO:GO:0006351 EMBL:BK006944
GO:GO:0003723 GO:GO:0005847 GO:GO:0004652 EMBL:X65124
RefSeq:NP_012929.4 GeneID:853873 KEGG:sce:YKR004C PDB:3C66
PDBsum:3C66 RefSeq:NP_012927.3 GeneID:853871 KEGG:sce:YKR002W
KO:K14376 GO:GO:0071050 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
OMA:FPGGVAW OrthoDB:EOG4SR150 EMBL:X60307 EMBL:Z28227 PIR:S19031
PDB:1FA0 PDB:2HHP PDB:2O1P PDB:2Q66 PDBsum:1FA0 PDBsum:2HHP
PDBsum:2O1P PDBsum:2Q66 ProteinModelPortal:P29468 SMR:P29468
DIP:DIP-2297N IntAct:P29468 MINT:MINT-375429 STRING:P29468
PaxDb:P29468 PeptideAtlas:P29468 EnsemblFungi:YKR002W CYGD:YKR002w
EvolutionaryTrace:P29468 NextBio:975142 Genevestigator:P29468
GermOnline:YKR002W Uniprot:P29468
Length = 568
Score = 807 (289.1 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
Identities = 171/440 (38%), Positives = 267/440 (60%)
Query: 5 STSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGIS 64
+T+A L+ +EL+K E F +E+E+ RV+VL L + + ++ V+ K +S
Sbjct: 18 ATAAENKLNDSLIQELKK----EGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNMS 73
Query: 65 DEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVE 124
D ++A K+FT+GSYRLGV GP +DID L V P + TR +DFF +L+E ++
Sbjct: 74 DG-MARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDSLLRERKELD 131
Query: 125 DLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGC 184
++ PVPDA VP+IK KF+G+S+DL+ A+L +P L +LL NLDE+ + +LNG
Sbjct: 132 EIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGT 191
Query: 185 RVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNAL 244
RVTD IL LVP FR LR ++ WA+RR +Y+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 192 RVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNAC 251
Query: 245 PNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTN 304
V+++RFF I + W WP PV+L PI+ + VW+P+ +DR H MP+ITP+YP
Sbjct: 252 SAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMC 311
Query: 305 SSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNA 364
+++N++ +T +++ +EF R ++ +I + K++W LFE FF +K YL+I + +
Sbjct: 312 ATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGS 371
Query: 365 GDFR-QWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
+ +W G VES++R L+ +E + G+ + F E+S ++ Y M + K
Sbjct: 372 DEQHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPFTKPF-ESSYCCPTEDDYEM-IQDKY 428
Query: 424 GVSPQDGEKFDMRLTVEEFK 443
G + ++L +E K
Sbjct: 429 GSHKTETALNALKLVTDENK 448
Score = 42 (19.8 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
Identities = 19/93 (20%), Positives = 40/93 (43%)
Query: 404 ENSVKSSSQCHYF-MGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSW--KQGMQIH 460
E S+K + + + M +G + + EK D+ + EF + + + +
Sbjct: 450 EESIKDAPKAYLSTMYIGLDFNIENKK-EKVDIHIPCTEFVNLCRSFNEDYGDHKVFNLA 508
Query: 461 VSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIE 493
+ ++ D+PD VF + P + KRK ++
Sbjct: 509 LRFVKGYDLPDEVFDENEKRPSK--KSKRKNLD 539
>GENEDB_PFALCIPARUM|PFF1240w [details] [associations]
symbol:PFF1240w "poly(A) polymerase PAP,
putative" species:5833 "Plasmodium falciparum" [GO:0006378 "mRNA
polyadenylation" evidence=ISS] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 EMBL:AL844505 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376
ProtClustDB:PTZ00418 RefSeq:XP_966239.1 ProteinModelPortal:C6KT92
EnsemblProtists:PFF1240w:mRNA GeneID:3885690 KEGG:pfa:PFF1240w
EuPathDB:PlasmoDB:PF3D7_0625600 OMA:MEDENNI Uniprot:C6KT92
Length = 631
Score = 687 (246.9 bits), Expect = 6.6e-79, Sum P(2) = 6.6e-79
Identities = 142/336 (42%), Positives = 216/336 (64%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS + P+ D+ + ++ ++L LF E R VLG ++ + +++ +++++
Sbjct: 86 EPISLNYPSEEDIKRSNDVVELLKGYNLFEEESGLKKRENVLGMINKLFHEFLIELSINQ 145
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
GIS+EE + L+TFGSYRLGV P++DID + + P TR + FF + + LQ+
Sbjct: 146 GISEEEA-NNISGNLYTFGSYRLGVITPNSDIDCIFLAPQNLTR-EIFFNEFYLKLQQDR 203
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQ-DSLLHNLDEQTVLS 180
V+ L +P+ P+I+F ++ V +DLL A L + + + SL D +L NLDE TV S
Sbjct: 204 NVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYKTLKDCYYSLDNDHILKNLDEVTVRS 263
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RV D IL+ VPN FR+TLR ++ WAK RGIYSN +GFLGGI+WALL A++CQLY
Sbjct: 264 LNGIRVADLILNSVPNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGISWALLTAKICQLY 323
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQ-Y--QAMPHH-VWDPRSNQRDRKHLMPII 296
PN + L+ +FFK+++ W W PV+L I+ Y + + + VWDP N +D+ H+MPII
Sbjct: 324 PNFNVSQLICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMPII 383
Query: 297 TPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIE 332
TP++PC NS++NV+ T I+ EEF+RA + + +E
Sbjct: 384 TPAFPCMNSTHNVTYCTRNILIEEFKRAHSIIQYME 419
Score = 125 (49.1 bits), Expect = 6.6e-79, Sum P(2) = 6.6e-79
Identities = 26/87 (29%), Positives = 43/87 (49%)
Query: 333 AGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGV 392
+ W+T+ EP F ++K++L I I N + WKGW+ES++R L +E
Sbjct: 445 SSNNVWMTILEPLDLFSTYKHFLHIQIMGINEFIYNSWKGWIESKIRLLFKKLETI--NE 502
Query: 393 LQCRLYPGDFSENSVKSSSQCHYFMGL 419
L+ R +P + KS +F+ L
Sbjct: 503 LKIRPFPKFYFYKKEKSYYCSSFFIAL 529
Score = 44 (20.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 14 VISTKE-LEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEA 72
+++ K+ LE+ ++ EE+ + L+ ++D VT + I +EE IQE
Sbjct: 17 MLNRKDSLEEFFEVSEIKEENEETYLNYNIECTLNKKIEDKKNNVTYRREIINEENIQE- 75
Query: 73 NAK 75
N K
Sbjct: 76 NKK 78
>UNIPROTKB|C6KT92 [details] [associations]
symbol:PFF1240w "Poly(A) polymerase PAP, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=ISS;IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 EMBL:AL844505 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376
ProtClustDB:PTZ00418 RefSeq:XP_966239.1 ProteinModelPortal:C6KT92
EnsemblProtists:PFF1240w:mRNA GeneID:3885690 KEGG:pfa:PFF1240w
EuPathDB:PlasmoDB:PF3D7_0625600 OMA:MEDENNI Uniprot:C6KT92
Length = 631
Score = 687 (246.9 bits), Expect = 6.6e-79, Sum P(2) = 6.6e-79
Identities = 142/336 (42%), Positives = 216/336 (64%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS + P+ D+ + ++ ++L LF E R VLG ++ + +++ +++++
Sbjct: 86 EPISLNYPSEEDIKRSNDVVELLKGYNLFEEESGLKKRENVLGMINKLFHEFLIELSINQ 145
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
GIS+EE + L+TFGSYRLGV P++DID + + P TR + FF + + LQ+
Sbjct: 146 GISEEEA-NNISGNLYTFGSYRLGVITPNSDIDCIFLAPQNLTR-EIFFNEFYLKLQQDR 203
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQ-DSLLHNLDEQTVLS 180
V+ L +P+ P+I+F ++ V +DLL A L + + + SL D +L NLDE TV S
Sbjct: 204 NVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYKTLKDCYYSLDNDHILKNLDEVTVRS 263
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RV D IL+ VPN FR+TLR ++ WAK RGIYSN +GFLGGI+WALL A++CQLY
Sbjct: 264 LNGIRVADLILNSVPNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGISWALLTAKICQLY 323
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQ-Y--QAMPHH-VWDPRSNQRDRKHLMPII 296
PN + L+ +FFK+++ W W PV+L I+ Y + + + VWDP N +D+ H+MPII
Sbjct: 324 PNFNVSQLICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMPII 383
Query: 297 TPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIE 332
TP++PC NS++NV+ T I+ EEF+RA + + +E
Sbjct: 384 TPAFPCMNSTHNVTYCTRNILIEEFKRAHSIIQYME 419
Score = 125 (49.1 bits), Expect = 6.6e-79, Sum P(2) = 6.6e-79
Identities = 26/87 (29%), Positives = 43/87 (49%)
Query: 333 AGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGV 392
+ W+T+ EP F ++K++L I I N + WKGW+ES++R L +E
Sbjct: 445 SSNNVWMTILEPLDLFSTYKHFLHIQIMGINEFIYNSWKGWIESKIRLLFKKLETI--NE 502
Query: 393 LQCRLYPGDFSENSVKSSSQCHYFMGL 419
L+ R +P + KS +F+ L
Sbjct: 503 LKIRPFPKFYFYKKEKSYYCSSFFIAL 529
Score = 44 (20.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 14 VISTKE-LEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEA 72
+++ K+ LE+ ++ EE+ + L+ ++D VT + I +EE IQE
Sbjct: 17 MLNRKDSLEEFFEVSEIKEENEETYLNYNIECTLNKKIEDKKNNVTYRREIINEENIQE- 75
Query: 73 NAK 75
N K
Sbjct: 76 NKK 78
>UNIPROTKB|F1NDP1 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
EMBL:AADN02003685 IPI:IPI00587050 Ensembl:ENSGALT00000018089
ArrayExpress:F1NDP1 Uniprot:F1NDP1
Length = 620
Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
Identities = 165/402 (41%), Positives = 234/402 (58%)
Query: 103 ATRH---DDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIP 159
A RH DFF + L++ V+DL V +A VPVIK F+G+ +D+L+A+L IP
Sbjct: 1 APRHVERSDFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIP 60
Query: 160 EDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSN 219
EDLD DSLL NLD + + SLNGCRVTD IL LVPNI NFR TLR ++ WAKR IYSN
Sbjct: 61 EDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSN 120
Query: 220 AMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHV 279
+GFLGG++WA+LVAR CQLYPNA+ + LV +FF +F+ W+WPNPV+L + + V
Sbjct: 121 ILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPV 180
Query: 280 WDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWI 339
WDPR N DR HLMPIITP+YP NS+YNVS +T +M EEF++ + +EI K W
Sbjct: 181 WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWS 240
Query: 340 TLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYP 399
LFE +FF +K+Y+ + +A +W G VES++R L+ +E++ L + P
Sbjct: 241 KLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITL-AHVNP 299
Query: 400 GDF---SENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQ- 455
F EN K + + +GL K+ + D+ ++ F V + K
Sbjct: 300 QSFPAPKENPDKEEYRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMF 358
Query: 456 --GMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVI 495
M+I H++ + + + P V K + + R+ +
Sbjct: 359 EMDMKIAARHVKRKQLHQLL-PNHVLQKKKKHSTEGVRLTAL 399
>RGD|1308673 [details] [associations]
symbol:Papola "poly (A) polymerase alpha" species:10116 "Rattus
norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISO;IBA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IBA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0043631 "RNA polyadenylation" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1308673 GO:GO:0005634 GO:GO:0005737
GO:GO:0006378 GO:GO:0003723 GO:GO:0000398 GO:GO:0006369
GO:GO:0004652 Gene3D:3.30.70.590 SUPFAM:SSF55003 IPI:IPI00567428
Ensembl:ENSRNOT00000047832 UCSC:RGD:1308673 ArrayExpress:F1MAC5
Uniprot:F1MAC5
Length = 681
Score = 712 (255.7 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 140/280 (50%), Positives = 187/280 (66%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPR 283
+ + LV +FF +F+ W+WPNPV+L + + VWDPR
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
Score = 48 (22.0 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 369 QWKGWVESRLRQLIHMIERD 388
+W G VES++R L+ +E++
Sbjct: 331 EWVGLVESKIRILVGSLEKN 350
>UNIPROTKB|D4A764 [details] [associations]
symbol:Papola "Protein Papola" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1308673 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 Gene3D:3.30.70.590
SUPFAM:SSF55003 IPI:IPI00776821 Ensembl:ENSRNOT00000057215
ArrayExpress:D4A764 Uniprot:D4A764
Length = 657
Score = 654 (235.3 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 129/256 (50%), Positives = 172/256 (67%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHW 259
+ + LV +FF +F+ W
Sbjct: 264 IASTLVHKFFLVFSKW 279
Score = 55 (24.4 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 341 LFEPYHFFGSFKNYLQI-HIAAKNAGDFRQ---WKGWVESRLRQLIHMIERD 388
+F ++ F + N + H+ +A +Q W G VES++R L+ +E++
Sbjct: 275 VFSKWYVFRLYYNKIDCRHVLLASAPTEKQRLEWVGLVESKIRILVGSLEKN 326
>TAIR|locus:2084274 [details] [associations]
symbol:PAPS3 "poly(A) polymerase 3" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA;ISS] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=RCA] InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0005737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 EMBL:AK221644 IPI:IPI00518099 RefSeq:NP_187308.3
UniGene:At.40500 ProteinModelPortal:Q56XM9 SMR:Q56XM9 IntAct:Q56XM9
STRING:Q56XM9 EnsemblPlants:AT3G06560.1 GeneID:819835
KEGG:ath:AT3G06560 TAIR:At3g06560 HOGENOM:HOG000006246
InParanoid:Q56XM9 OMA:IDETSWK PhylomeDB:Q56XM9
ProtClustDB:CLSN2699159 Genevestigator:Q56XM9 Uniprot:Q56XM9
Length = 507
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 163/422 (38%), Positives = 234/422 (55%)
Query: 16 STKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAK 75
S+ L +++V+E L S E+ + R V+ +L IV W+K V + + QI NA
Sbjct: 17 SSISLRQLMVNEGLIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLP-QNQIDATNAT 75
Query: 76 LFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVP 135
+ +GSY LGV G +DIDALC+GP +A+ +DFF L ML+ V +L V DA+VP
Sbjct: 76 ILPYGSYGLGVYGSESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKDAKVP 135
Query: 136 VIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVP 195
+I+FKF+G+ VDL YAQL+ IP ++D L L ++DE + L+G R IL LVP
Sbjct: 136 LIRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQLVP 195
Query: 196 NIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKI 255
++ F+S LRC++ WAKRRG+Y N GFLGG++ A+L A VC PNA + L++ FF
Sbjct: 196 SLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYT 255
Query: 256 FAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITP--SYPCTNSSYNVSSTT 313
FAHW+WP PV+L Y P P LMPI P S+ NS+ ST
Sbjct: 256 FAHWQWPTPVVLLEDTY---PSTGAPPG--------LMPIQLPCGSHQYCNSTIT-RSTF 303
Query: 314 LRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGW 373
+I+ E F L ++ +W LFE Y + ++ + +IH++A N D W GW
Sbjct: 304 YKIVAE-FLLGHNLTKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGW 362
Query: 374 VESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLG-RKQGVSPQDGEK 432
V+SR R L+ IE ++ G+ C P ++ E K + Y+ GL R VS + K
Sbjct: 363 VKSRFRCLLIKIE-EVYGI--CDPNPTEYVETYTKQPNIVFYW-GLQLRTINVSDIESVK 418
Query: 433 FD 434
D
Sbjct: 419 ID 420
>UNIPROTKB|F8WAT4 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007012 Pfam:PF01909 Pfam:PF04928
GO:GO:0006351 GO:GO:0004652 HGNC:HGNC:14982 EMBL:AC011245
EMBL:AC012498 IPI:IPI00893537 ProteinModelPortal:F8WAT4 SMR:F8WAT4
Ensembl:ENST00000414060 ArrayExpress:F8WAT4 Bgee:F8WAT4
Uniprot:F8WAT4
Length = 234
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 118/231 (51%), Positives = 154/231 (66%)
Query: 29 LFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAG 88
+F EEE R+ VLG+L+ +VK+WI V+ K + + K+FTFGSYRLGV
Sbjct: 6 VFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNLPPSV-VATVGGKIFTFGSYRLGVHT 64
Query: 89 PSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDL 148
DIDALCV P + R DFF F L+ + +L V DA VPVIKF+F+G+ +DL
Sbjct: 65 KGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDL 123
Query: 149 LYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLR 208
++A+L I ++LD DS L +LD + + SLNGCRVTD IL LVPN FR TLR ++
Sbjct: 124 VFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVK 183
Query: 209 FWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHW 259
WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA + LV +FF +F+ W
Sbjct: 184 LWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKW 234
>UNIPROTKB|H0YJ00 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR007012 Pfam:PF04928 GO:GO:0006351 GO:GO:0004652
EMBL:AL163051 HGNC:HGNC:14981 ChiTaRS:PAPOLA
Ensembl:ENST00000553461 Uniprot:H0YJ00
Length = 203
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 104/189 (55%), Positives = 132/189 (69%)
Query: 95 ALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQ 154
ALCV P + R DFF + L+ V+DL V +A VPVIK F+G+ +D+L+A+L
Sbjct: 2 ALCVAPRHVDR-SDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLA 60
Query: 155 FSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRR 214
IPEDLD DSLL NLD + + SLNGCRVTD IL LVPNI NFR TLR ++ WAKR
Sbjct: 61 LQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRH 120
Query: 215 GIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA 274
IYSN +GFLGG++WA+LVAR CQLYPNA+ + LV +FF +F+ W+WPNPV+L +
Sbjct: 121 NIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECN 180
Query: 275 MPHHVWDPR 283
+ VWDPR
Sbjct: 181 LNLPVWDPR 189
>UNIPROTKB|G3V2A0 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
Pfam:PF04926 Pfam:PF04928 GO:GO:0005634 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 GO:GO:0043631 EMBL:AL163051 Gene3D:3.30.70.590
SUPFAM:SSF55003 HGNC:HGNC:14981 ChiTaRS:PAPOLA
ProteinModelPortal:G3V2A0 SMR:G3V2A0 Ensembl:ENST00000555626
ArrayExpress:G3V2A0 Bgee:G3V2A0 Uniprot:G3V2A0
Length = 475
Score = 386 (140.9 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 84/219 (38%), Positives = 124/219 (56%)
Query: 231 LLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRK 290
+LVAR CQLYPNA+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 291 HLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS 350
HLMPIITP+YP NS+YNVS +T +M EEF++ + +EI K W LFE +FF
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQK 120
Query: 351 FKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSV 407
+K+Y+ + +A +W G VES++R L+ +E++ L + P F EN
Sbjct: 121 YKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPD 179
Query: 408 KSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHV 446
K + + +GL K+ + D+ ++ F V
Sbjct: 180 KEEFRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTV 217
>UNIPROTKB|H7C3W0 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007012 Pfam:PF01909 Pfam:PF04928
GO:GO:0006351 GO:GO:0004652 HGNC:HGNC:14982 EMBL:AC011245
EMBL:AC012498 ProteinModelPortal:H7C3W0 Ensembl:ENST00000453839
Bgee:H7C3W0 Uniprot:H7C3W0
Length = 168
Score = 264 (98.0 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 62/147 (42%), Positives = 86/147 (58%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS ++P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 19 ISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 78
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 79 PPSV-VATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 136
Query: 124 EDLTPVPDARVPVIKFKFNGVSV-DLL 149
+L V DA VPVIKF+F+G+ V +LL
Sbjct: 137 RNLRAVEDAFVPVIKFEFDGIEVVELL 163
>UNIPROTKB|G3V3I9 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007012 Pfam:PF01909 Pfam:PF04928
GO:GO:0006351 GO:GO:0004652 EMBL:AL163051 HGNC:HGNC:14981
ChiTaRS:PAPOLA ProteinModelPortal:G3V3I9 SMR:G3V3I9
Ensembl:ENST00000556619 ArrayExpress:G3V3I9 Bgee:G3V3I9
Uniprot:G3V3I9
Length = 177
Score = 230 (86.0 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 58/154 (37%), Positives = 84/154 (54%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEES--------------LGRVEVLGRLDGI 49
IS +AP D + T++L + L +F EEE + R+ +LG+L+ +
Sbjct: 26 ISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRSNDLEYLIDNCFINRILILGKLNNL 85
Query: 50 VKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF 109
VK+WI+ ++ K + + I+ K+FTFGSYRLGV DIDALCV P + R DF
Sbjct: 86 VKEWIREISESKNLP-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDF 143
Query: 110 FGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNG 143
F + L+ V+DL V +A VPVIK F+G
Sbjct: 144 FTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDG 177
>UNIPROTKB|G4N5I8 [details] [associations]
symbol:MGG_06121 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR009097 InterPro:IPR011068 Pfam:PF04926 Pfam:PF04928
Pfam:PF03372 GO:GO:0005634 EMBL:CM001233 GO:GO:0006351
GO:GO:0003723 SUPFAM:SSF55144 InterPro:IPR005135 SUPFAM:SSF56219
GO:GO:0004652 GO:GO:0043631 SUPFAM:SSF55003 RefSeq:XP_003711988.1
ProteinModelPortal:G4N5I8 EnsemblFungi:MGG_06121T0 GeneID:2684277
KEGG:mgr:MGG_06121 InterPro:IPR007547 Pfam:PF04457 Uniprot:G4N5I8
Length = 1238
Score = 257 (95.5 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 97/376 (25%), Positives = 169/376 (44%)
Query: 61 KGISDEEQIQEANAKLFTF--GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQ 118
+G+SD + + + GS+ LGV+ S+DID LC+GP ++ FF + ++
Sbjct: 647 EGVSDASEYDRLRSSIIMVPVGSWGLGVSTLSSDIDCLCIGPLSSST---FFALTTQRIK 703
Query: 119 ETPLVEDLTPVPDARVP-----VIKFKFNGVSVDLLY--AQLQFSVIPEDLDSLQDSLLH 171
+ + L RV +++ + V VDL Y A P L + +
Sbjct: 704 KASVESGLEIKLLRRVRANSGVMLELEVMSVRVDLQYCAATAVAEQWPAVLKLPPNDPIF 763
Query: 172 NLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWAL 231
L QT+ L R D + +P++ FR R ++ WA+ RGIYS G+LGGI ++
Sbjct: 764 ALPAQTLGKLKALRDLDYLRETIPDLSKFRLAHRAIKTWAQSRGIYSAKFGYLGGIQVSI 823
Query: 232 LVARVCQLYPN------ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSN 285
L+ARVC+L ++P++L S FF +A + W N + P ++ + +
Sbjct: 824 LLARVCKLLARDYGQEVSVPDIL-SSFFSHYASFDWRNKIAFDPFFHKKLNY-------- 874
Query: 286 QRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLF--- 342
R + + I+ P N++ + +++ + E +A EL E TW T F
Sbjct: 875 LRSAREPLAILGFFPPALNTTLAATVPSMKAIARELSQANELLNE---DGMTWDTFFGAS 931
Query: 343 ----EPYH--------FFGSFKNYLQIHIA--AKNAGDFRQWKGWVESRLRQLIHMIERD 388
+ H F S+K++++I + + Q+ GW+ESR L+ + R
Sbjct: 932 SAGGDKTHSLARGAADFLSSYKSFVKIELQYWGISLSKGSQFIGWLESRCPLLLVDMSRR 991
Query: 389 MGGVLQCRLYPGDFSE 404
+ L R++P F E
Sbjct: 992 LPQ-LNFRIWPQRFVE 1006
>UNIPROTKB|F1NDP2 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] InterPro:IPR007012 Pfam:PF04928 GO:GO:0006351
GO:GO:0004652 GeneTree:ENSGT00390000017928 EMBL:AADN02003685
IPI:IPI00582545 Ensembl:ENSGALT00000018088 ArrayExpress:F1NDP2
Uniprot:F1NDP2
Length = 109
Score = 160 (61.4 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 33/83 (39%), Positives = 52/83 (62%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 25 ISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGV 86
+ I+ K+FTFGSYRLGV
Sbjct: 85 P-QSVIENVGGKIFTFGSYRLGV 106
>UNIPROTKB|G3V457 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR007012 Pfam:PF04928 GO:GO:0006351 GO:GO:0004652
EMBL:AL163051 HGNC:HGNC:14981 ChiTaRS:PAPOLA
ProteinModelPortal:G3V457 SMR:G3V457 Ensembl:ENST00000553689
ArrayExpress:G3V457 Bgee:G3V457 Uniprot:G3V457
Length = 111
Score = 160 (61.4 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 33/83 (39%), Positives = 52/83 (62%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGV 86
+ I+ K+FTFGSYRLGV
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGV 107
>UNIPROTKB|Q59G05 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma variant"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR007010
InterPro:IPR011068 Pfam:PF04926 GO:GO:0005634 GO:GO:0003723
GO:GO:0004652 GO:GO:0043631 KO:K14376 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 HOVERGEN:HBG053502
RefSeq:NP_075045.2 UniGene:Hs.387471 GeneID:64895 KEGG:hsa:64895
CTD:64895 HGNC:HGNC:14982 GenomeRNAi:64895 NextBio:67037
EMBL:AC011245 EMBL:AC012498 EMBL:AB209304 IPI:IPI00555821
ProteinModelPortal:Q59G05 SMR:Q59G05 STRING:Q59G05 PRIDE:Q59G05
Ensembl:ENST00000412217 ArrayExpress:Q59G05 Bgee:Q59G05
Uniprot:Q59G05
Length = 382
Score = 163 (62.4 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 50/214 (23%), Positives = 105/214 (49%)
Query: 316 IMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVE 375
+M EEF++ + +EI GK W L EP +FF +++Y+ + +A + +W G VE
Sbjct: 3 VMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVE 62
Query: 376 SRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEK 432
S++R L+ +ER+ L + +PG+ E+ ++ +F+G+ ++ V +
Sbjct: 63 SKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGIIFRR-VENAESVN 120
Query: 433 FDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKR 489
D+ ++ F V ++ K+GM+I +H++ + + ++ P + L +KK+
Sbjct: 121 IDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL------PAEILQKKKK 174
Query: 490 KRIEVIXXXXXXXXXXXXAGHSSGQKSSQ-TESG 522
+ + + + SS SS+ T++G
Sbjct: 175 QSLSDVNRSSGGLQSKRLSLDSSCLDSSRDTDNG 208
>UNIPROTKB|F1PYB9 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR007010 InterPro:IPR011068
Pfam:PF04926 GO:GO:0005634 GO:GO:0006378 GO:GO:0003723
GO:GO:0004652 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 EMBL:AAEX03007549
Ensembl:ENSCAFT00000004771 Uniprot:F1PYB9
Length = 384
Score = 162 (62.1 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 49/214 (22%), Positives = 105/214 (49%)
Query: 316 IMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVE 375
+M EEF++ + +EI GK W L EP +FF +++Y+ + +A + +W G VE
Sbjct: 3 VMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVE 62
Query: 376 SRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEK 432
S++R L+ +ER+ L + +PG+ E+ ++ +F+G+ ++ V +
Sbjct: 63 SKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGIIFRR-VENAESVN 120
Query: 433 FDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKR 489
D+ ++ F V ++ K+GM+I +H++ + + ++ P + L +KK+
Sbjct: 121 IDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL------PAEILQKKKK 174
Query: 490 KRIEVIXXXXXXXXXXXXAGHSSGQKSSQ-TESG 522
+ + + + S+ SS+ T++G
Sbjct: 175 QSLSDVSRSSSGPQSKRSSLDSNCLDSSRDTDNG 208
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 636 580 0.00081 120 3 11 22 0.37 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 54
No. of states in DFA: 630 (67 KB)
Total size of DFA: 354 KB (2176 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 44.53u 0.11s 44.64t Elapsed: 00:00:03
Total cpu time: 44.54u 0.11s 44.65t Elapsed: 00:00:03
Start: Tue May 21 15:52:07 2013 End: Tue May 21 15:52:10 2013