BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006658
(636 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297737752|emb|CBI26953.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/696 (52%), Positives = 456/696 (65%), Gaps = 67/696 (9%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IST+ PT D+I T+ELEK L D L+ + EE++ R EVLGR+D IVK W+K V+ K
Sbjct: 19 EPISTAGPTEFDLIKTRELEKFLADSGLYETREEAIRREEVLGRVDQIVKVWVKTVSRAK 78
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G +E+ + EANAK+FTFGSYRLGV GP DID LCVGP +ATR +DFFG+L RML ETP
Sbjct: 79 GF-NEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELHRMLAETP 137
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V++L PVPDA VPV+KFKFNGVS+DLLYA+L VIPEDLD Q+++L N+DEQTV SL
Sbjct: 138 EVQELHPVPDAHVPVMKFKFNGVSIDLLYARLSLWVIPEDLDISQETILQNVDEQTVRSL 197
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD+IL LVPNI+NFR+TLRC+RFWAKRRG+YSN GFLGGINWALLVAR+CQLYP
Sbjct: 198 NGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLYP 257
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NA+P+ LVSRFF+++ W+WPNPVMLCPI+ + + VWDPR N +DR HLMPIITP+YP
Sbjct: 258 NAVPSTLVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIKDRNHLMPIITPAYP 317
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
NSSYNVS +TLRIM+EE QR E+ +E+E WITLFEP+ FF ++KNYLQI I A
Sbjct: 318 SMNSSYNVSWSTLRIMEEELQRGNEIVKEMETENTGWITLFEPFLFFEAYKNYLQIDITA 377
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
+N D R WKGWVESRLR L IERD GG+LQC +P +FS+ S +S C YFMGL R
Sbjct: 378 ENDVDLRNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTS-RSFHYC-YFMGLRR 435
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPP 481
K+G + Q+GE+FD+RLTV++FK + VWMYSSWK+GM IHV H+R ++IP+FVFPGGVRPP
Sbjct: 436 KEGSAAQEGEQFDIRLTVDDFK-NTVWMYSSWKRGMWIHVCHIRRKNIPNFVFPGGVRPP 494
Query: 482 KSL---------------NEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALD 526
+ + N +KRKR E+ + ++S S S + V ++
Sbjct: 495 QPMKVAGEQGQVSKPMGFNSQKRKRDEIDAGSHPRESTSLVENVESDLQGEVKLEQVEVN 554
Query: 527 GSHGLKSGPSVEPSTSSVSSSTSASSRPQRP---------------AVSIETE------- 564
L ++S S +R +P A+ IET
Sbjct: 555 VGDSLTKVICSSENSSHNSIELEGYARCSQPLGAASSASGSLSLGRALVIETTSEPLVHQ 614
Query: 565 -------DDNATSVSQAQNFNQVGATVAAALATGT---------------ISSFCQNESL 602
+ V Q QNF+ VG V ++ SS QN L
Sbjct: 615 CSSKEVGESQVGLVDQVQNFD-VGKRVNCVQSSTAERGMAAAAAGQGFSPCSSLFQNGGL 673
Query: 603 EELEPPELTAPCFK---TAFVATQKPIIKLQFSSLV 635
EELE ELTAP + A QK +I+L +SL+
Sbjct: 674 EELEDAELTAPFYHGNPGASSTPQKHLIRLSVNSLM 709
>gi|359472651|ref|XP_002280091.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 587
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/519 (62%), Positives = 399/519 (76%), Gaps = 19/519 (3%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IST+ PT D+I T+ELEK L D L+ + EE++ R EVLGR+D IVK W+K V+ K
Sbjct: 19 EPISTAGPTEFDLIKTRELEKFLADSGLYETREEAIRREEVLGRVDQIVKVWVKTVSRAK 78
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G +E+ + EANAK+FTFGSYRLGV GP DID LCVGP +ATR +DFFG+L RML ETP
Sbjct: 79 GF-NEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELHRMLAETP 137
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V++L PVPDA VPV+KFKFNGVS+DLLYA+L VIPEDLD Q+++L N+DEQTV SL
Sbjct: 138 EVQELHPVPDAHVPVMKFKFNGVSIDLLYARLSLWVIPEDLDISQETILQNVDEQTVRSL 197
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD+IL LVPNI+NFR+TLRC+RFWAKRRG+YSN GFLGGINWALLVAR+CQLYP
Sbjct: 198 NGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLYP 257
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NA+P+ LVSRFF+++ W+WPNPVMLCPI+ + + VWDPR N +DR HLMPIITP+YP
Sbjct: 258 NAVPSTLVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIKDRNHLMPIITPAYP 317
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
NSSYNVS +TLRIM+EE QR E+ +E+E WITLFEP+ FF ++KNYLQI I A
Sbjct: 318 SMNSSYNVSWSTLRIMEEELQRGNEIVKEMETENTGWITLFEPFLFFEAYKNYLQIDITA 377
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
+N D R WKGWVESRLR L IERD GG+LQC +P +FS+ S +S C YFMGL R
Sbjct: 378 ENDVDLRNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTS-RSFHYC-YFMGLRR 435
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPP 481
K+G + Q+GE+FD+RLTV++FK + VWMYSSWK+GM IHV H+R ++IP+FVFPGGVRPP
Sbjct: 436 KEGSAAQEGEQFDIRLTVDDFK-NTVWMYSSWKRGMWIHVCHIRRKNIPNFVFPGGVRPP 494
Query: 482 KSL---------------NEKKRKRIEVIESTKLKKSES 505
+ + N +KRKR E+ + ++S S
Sbjct: 495 QPMKVAGEQGQVSKPMGFNSQKRKRDEIDAGSHPRESTS 533
>gi|449439435|ref|XP_004137491.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
gi|449521033|ref|XP_004167536.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 748
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/727 (49%), Positives = 457/727 (62%), Gaps = 99/727 (13%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS S PT DV+ T+ELEK L D L+ S+E+++ R EVLGRLD IVK W+K ++ KG+
Sbjct: 22 ISLSGPTEYDVLKTRELEKYLQDAGLYESQEDAVNREEVLGRLDQIVKIWVKAISRAKGL 81
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+E+ +QEANAK+FTFGSYRLGV GP DID LCVGP +ATR +DFFG+L +ML E P V
Sbjct: 82 -NEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHKMLSEMPEV 140
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV++FK +GVS+DLLYA+L VIPEDLD QDS+L N DEQTV SLNG
Sbjct: 141 SELHPVPDAHVPVMRFKLSGVSIDLLYAKLSLWVIPEDLDISQDSILQNTDEQTVRSLNG 200
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTDRIL LVPNI++FR+TLRC+RFWAKRRG+YSN GFLGGINWALLVAR+CQLYPNA
Sbjct: 201 CRVTDRILRLVPNIQSFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLYPNA 260
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
LPN+LVSRFF++F W+WPNPVMLC + ++ VWDPR N +DR HLMPIITP+YPC
Sbjct: 261 LPNMLVSRFFRVFTQWRWPNPVMLCANEEGSLGLQVWDPRRNPKDRYHLMPIITPAYPCM 320
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS++TLRIM EEF+R ++CE +E K W TLFEPY FF ++KNYLQI I A+N
Sbjct: 321 NSSYNVSASTLRIMTEEFRRGHDICEVMEENKSDWDTLFEPYPFFEAYKNYLQIDITAEN 380
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
D R WKGWVESRLRQL IER +LQC YPGDFS+ S + C YFMGL RKQ
Sbjct: 381 DDDIRIWKGWVESRLRQLTLKIERHTYNMLQCHPYPGDFSDKS-RPFHHC-YFMGLQRKQ 438
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKS 483
G GE+FD+RLTV+EFK H V +Y+ K+GM+I+VSH++ + IP+FVFPGGVRP ++
Sbjct: 439 GGPASGGEQFDIRLTVDEFK-HSVNVYTQRKRGMEIYVSHVKRRSIPNFVFPGGVRPSRA 497
Query: 484 L---------------------------------NEKKRKRIEVIESTKLKKSESSTAGH 510
+ +KR RI+ +T L+ E H
Sbjct: 498 SKLTWDIRRSSELKASDSTQVDSPSEATESLDGDDRRKRIRIDDNANTNLRNGECLAMAH 557
Query: 511 SSGQ------KSSQTESGVALD----------------------GSHG-LKSGPSVEPST 541
S + + S T S D G HG L+ PS +
Sbjct: 558 SHPEEVHEVSQVSNTSSCSIKDVNFIPTSANNLENLADVSSQNNGDHGSLRVSPSTN-NV 616
Query: 542 SSVSSSTSASSRPQRPAV------SIETEDDNATSVSQAQNFN------QVGATVAAALA 589
S ++ TS ++ A+ S ++ D + ++F+ GAT +
Sbjct: 617 SDAAADTSNCKEAEKLAIQKILSDSYDSHQDFPCETEELEDFDYNNQAKDFGATKQGSPM 676
Query: 590 TGTI-------------------SSFCQNESLEELEPPELTAP-CFKTAFVATQKPIIKL 629
++ SS N LEELEP E+ AP TA VA +KPII+L
Sbjct: 677 MSSVANTSPLVLPTVSCNEARQSSSSYYNGGLEELEPAEIVAPLSTGTAPVAERKPIIRL 736
Query: 630 QFSSLVK 636
F+SL K
Sbjct: 737 SFTSLGK 743
>gi|255567792|ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus communis]
gi|223535837|gb|EEF37498.1| Poly(A) polymerase alpha, putative [Ricinus communis]
Length = 770
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/660 (53%), Positives = 439/660 (66%), Gaps = 74/660 (11%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS PT D+I ++ELEK L D L+ S EES+ R EVLGRLD IVK W+K ++ KG+
Sbjct: 24 ISLGGPTEYDLIKSRELEKFLQDMGLYESREESVSREEVLGRLDQIVKHWVKVISRAKGL 83
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+E+ +QEANAK+FTFGSYRLGV GP DID LCVGP +ATR +DFFG+L RML E P V
Sbjct: 84 -NEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHRMLSEMPEV 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF GVS+DLLYA+L VIPEDLD QDS+L N DEQTV SLNG
Sbjct: 143 TELHPVPDAHVPVLKFKFKGVSIDLLYAKLSLWVIPEDLDISQDSILQNADEQTVRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD+IL LVPNI+NFR+TLRC+RFWAKRRG+YSN GFLGGINWALLVAR+CQL+PNA
Sbjct: 203 CRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLFPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
LPN+LVSRFF+++ W+WPNPVMLC I+ ++ VWDPR N +DR HLMPIITP+YP
Sbjct: 263 LPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQVWDPRRNPKDRYHLMPIITPAYPSM 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS++TLRIM EEFQR E+CE +EA K W TLFE + FF ++KNYLQI I A+N
Sbjct: 323 NSSYNVSASTLRIMSEEFQRGNEICEAMEASKADWNTLFESFSFFDAYKNYLQIDIGAEN 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
D R+WKGWVESRLRQL IER +LQC +PG+F++ S C YFMGL RKQ
Sbjct: 383 EDDLRKWKGWVESRLRQLTLKIERHTFNMLQCHPHPGEFTDKS--RPLHCSYFMGLQRKQ 440
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPK- 482
GV +GE+FD+R+TVEEFK V MY+SWK GM+IHV+H++ ++IP FVFPGG+RP +
Sbjct: 441 GVPANEGEQFDIRITVEEFKISVN-MYTSWKPGMEIHVTHVKRRNIPSFVFPGGIRPSRP 499
Query: 483 ------------------------SLNEKKRKRIE--VIESTKLKKSESSTAGHSSGQKS 516
S ++ KRKRI+ V +TK+ K +S++
Sbjct: 500 SKTTWDSKRSSAEKSGEGKGVSDGSDDKGKRKRIDDNVANATKIAKPDSTSP-------- 551
Query: 517 SQTESGVALDGSHGLKSGPSVEPSTSSVS---SSTSASSRPQRPAVSIETEDDNATSVS- 572
SG +GS PS +VS +ST+A P+ V DD + S
Sbjct: 552 ---LSGEVNNGS----------PSAGTVSLLLTSTNAVGEPRDEPVENNLTDDFSNSKDL 598
Query: 573 ---QAQN------------FNQVGATVAAALATGTISS--FCQNESL-EELEPPELTAPC 614
A N N+ + VA LA TI S + N++L +EL+ E C
Sbjct: 599 TGFYAHNGELNPPNKVLLGINEAPSKVAEKLAIETIMSGPYVTNQALPQELDELEDDFEC 658
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 564 EDDNATSVSQAQNFNQVGATVAAALATGTISSFCQNESLEELEPPELTAPCF----KTAF 619
E +A++ ++ V A V ++ T ++ C N LEELEP EL AP F A
Sbjct: 680 ESSSASTTAKTLPNAPVAAPVISSNGTDPSTALCPNGGLEELEPAELVAPFFSGISSAAP 739
Query: 620 VATQKPIIK 628
VA +KP+I+
Sbjct: 740 VAQRKPLIR 748
>gi|297734259|emb|CBI15506.3| unnamed protein product [Vitis vinifera]
Length = 651
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/651 (54%), Positives = 436/651 (66%), Gaps = 41/651 (6%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS P LDV T+ELEK L L+ S+EE++ R EVLGRLD IVK W+K ++ K
Sbjct: 20 EPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEVLGRLDQIVKIWVKAISRAK 79
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G+ +E+ +QEANAK+FTFGSYRLGV GP DID LCVGP +ATR +DFFG+L +ML E P
Sbjct: 80 GL-NEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHKMLSEMP 138
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVPDA VPV++FKF+GVS+DLLYA+L VIPEDLD QDS+L N DEQTV SL
Sbjct: 139 EVTELHPVPDAHVPVMRFKFSGVSIDLLYAKLSLWVIPEDLDVSQDSILQNADEQTVRSL 198
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD+IL LVPNI+NFR+TLR +RFWAKRRG+YSN GFLGGINWALLVAR+CQLYP
Sbjct: 199 NGCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 258
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NALP++LVSRFF+++ W+WPNPVMLC I+ + VWDPR +DR HLMPIITP+YP
Sbjct: 259 NALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYP 318
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
C NSSYNVSS+TLRIM EEF+R E+ E +EA K W TL EPY FF ++KNYLQI IAA
Sbjct: 319 CMNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKADWATLCEPYPFFEAYKNYLQIEIAA 378
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
+NA D R+WKGWVESRLRQL IER +LQC +PGDFS+ S C YFMGL R
Sbjct: 379 ENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS--RPFHCCYFMGLQR 436
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPP 481
KQGV +GE+FD+RLTV+EFK H V MY+ WK GM+IHV H+R ++IP+FVFPGG
Sbjct: 437 KQGVPASEGEQFDIRLTVDEFK-HSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGYGYK 495
Query: 482 KSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSVEPST 541
+K+RK + S + + + S++ E +A++ + SGP V
Sbjct: 496 YVGKDKERK---IDGSVRCSHPIKTLSSSGGSPSSTEAEK-IAIE---KIMSGPYV---- 544
Query: 542 SSVSSSTSASSRPQRPAVSIETEDD-----------NATSVSQAQNFNQVGATVAAALAT 590
S P E EDD +T S A++ A +
Sbjct: 545 ----------SHQAFPGELDELEDDVEYKNQVKDFTGSTKGSSAESSKANVAEEPLTTTS 594
Query: 591 GTI--SSFCQNESLEELEPPELTAPCF---KTAFVATQKPIIKLQFSSLVK 636
GT+ + N LEELEP EL P + + +KPII+L F+SL K
Sbjct: 595 GTVPCTILSPNGGLEELEPAELMPPLSYGNRPSSTEQKKPIIRLSFTSLAK 645
>gi|357500153|ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula]
gi|355495380|gb|AES76583.1| Poly(A) polymerase [Medicago truncatula]
Length = 752
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/557 (59%), Positives = 408/557 (73%), Gaps = 18/557 (3%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS + PT DV T ELEK L L+ S++E++GR EVLGRLD IVK W+K ++ K
Sbjct: 20 EPISLAGPTEEDVTKTHELEKYLQGAGLYESQQEAVGREEVLGRLDQIVKIWVKTISRAK 79
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G +E+ +QEANAK+FTFGSYRLGV GP DID LCVGP +ATR +DFFG+L +ML E
Sbjct: 80 GF-NEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELQKMLSEME 138
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVPDA VPV+KFKFNGVSVDLLYA+L VIPEDLD Q+S+L N+DEQTVLSL
Sbjct: 139 EVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPEDLDISQESILQNVDEQTVLSL 198
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD++L LVPNI+NFR+TLR +RFWAKRRG+YSN GFLGGIN ALLV R+CQLYP
Sbjct: 199 NGCRVTDQVLRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINLALLVGRICQLYP 258
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NALPN+LVSRFF+++ W+WPNPVMLC I+ ++ VWDPR N RDR HLMPIITP+YP
Sbjct: 259 NALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPRDRYHLMPIITPAYP 318
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
C NS+YNV+++TLRIM +EF+R E+CE +EA K W TLFEPY FF ++KNYLQI I A
Sbjct: 319 CMNSTYNVTTSTLRIMSDEFKRGTEICEAMEASKADWDTLFEPYPFFEAYKNYLQIDITA 378
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
+N D RQWKGWVESRLRQL IE+ G+LQC YPG+FS+ S +S QC YFMGL R
Sbjct: 379 ENPDDLRQWKGWVESRLRQLTLKIEKYTYGMLQCHPYPGEFSDKS-RSFHQC-YFMGLQR 436
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRP- 480
KQGV +GE+FD+R TVEEFK H V Y++WK GM I VSH++ ++IP+F+FPGGVRP
Sbjct: 437 KQGVPVSEGEQFDIRQTVEEFK-HNVNAYTAWKPGMDIRVSHVKRRNIPNFIFPGGVRPS 495
Query: 481 -PKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSVEP 539
P +N + R + S+S AG S +K SQ V L K +
Sbjct: 496 VPSRVNGENR-----------RSSKSRVAGQSQSEK-SQGGKAVVLGADDERKRKRLEDN 543
Query: 540 STSSVSSSTSASSRPQR 556
+ S VS S+++ S P R
Sbjct: 544 NNSRVSKSSASVSPPNR 560
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 565 DDNATSVSQAQNFNQ-------VGATVAAALATGTISSFCQNESLEELEPPELTAP--CF 615
+DN SV ++ NF+ V V + + SFC N LEELEP ELTAP C
Sbjct: 668 NDNGGSV-KSNNFDSSNPNPVVVEDQVISKETVCSTHSFC-NGGLEELEPAELTAPLFCG 725
Query: 616 KTAFVATQKPIIKLQFSSLVK 636
A V +KP+I+L F+SL K
Sbjct: 726 IPAPVPQKKPLIRLNFTSLGK 746
>gi|359490984|ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 757
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/500 (63%), Positives = 385/500 (77%), Gaps = 6/500 (1%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS P LDV T+ELEK L L+ S+EE++ R EVLGRLD IVK W+K ++ K
Sbjct: 20 EPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEVLGRLDQIVKIWVKAISRAK 79
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G+ +E+ +QEANAK+FTFGSYRLGV GP DID LCVGP +ATR +DFFG+L +ML E P
Sbjct: 80 GL-NEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHKMLSEMP 138
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVPDA VPV++FKF+GVS+DLLYA+L VIPEDLD QDS+L N DEQTV SL
Sbjct: 139 EVTELHPVPDAHVPVMRFKFSGVSIDLLYAKLSLWVIPEDLDVSQDSILQNADEQTVRSL 198
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD+IL LVPNI+NFR+TLR +RFWAKRRG+YSN GFLGGINWALLVAR+CQLYP
Sbjct: 199 NGCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 258
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NALP++LVSRFF+++ W+WPNPVMLC I+ + VWDPR +DR HLMPIITP+YP
Sbjct: 259 NALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYP 318
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
C NSSYNVSS+TLRIM EEF+R E+ E +EA K W TL EPY FF ++KNYLQI IAA
Sbjct: 319 CMNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKADWATLCEPYPFFEAYKNYLQIEIAA 378
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
+NA D R+WKGWVESRLRQL IER +LQC +PGDFS+ S C YFMGL R
Sbjct: 379 ENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS--RPFHCCYFMGLQR 436
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRP- 480
KQGV +GE+FD+RLTV+EFK H V MY+ WK GM+IHV H+R ++IP+FVFPGGVRP
Sbjct: 437 KQGVPASEGEQFDIRLTVDEFK-HSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGVRPS 495
Query: 481 -PKSLNEKKRKRIEVIESTK 499
P + ++R+ +E ST+
Sbjct: 496 RPTKVASERRRVLEPNVSTQ 515
>gi|356531174|ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/479 (65%), Positives = 380/479 (79%), Gaps = 4/479 (0%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS + PT DVI T+ELEK L L+ S+EE++GR EVLGRLD IVK W+K ++ K
Sbjct: 20 EPISLAGPTEDDVIKTRELEKYLQGVGLYESQEEAVGREEVLGRLDQIVKIWVKNISRAK 79
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G +E+ + EANAK+FTFGSYRLGV GP DID LCVGP +A+R +DFFG+L +ML E
Sbjct: 80 GF-NEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHASRDEDFFGELQKMLSEMQ 138
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVPDA VPV+KFKFNGVSVDLLYA+L VIP+DLD Q+S+L N+DEQTVLSL
Sbjct: 139 EVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPDDLDISQESILQNVDEQTVLSL 198
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD++L LVPNI+ FR+TLRC+RFWAKRRG+YSN GFLGGIN ALLVAR+CQLYP
Sbjct: 199 NGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGINLALLVARICQLYP 258
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NALPN+LVSRFF+++ W+WPNPVMLC I+ ++ VWDPR N +DR HLMPIITP+YP
Sbjct: 259 NALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLMPIITPAYP 318
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
C NS+YNV+S+TLR+M +EF+R E+CE +EA K W TLFEPY FF S+KNYLQI I A
Sbjct: 319 CMNSTYNVTSSTLRVMSDEFRRGSEICEAMEASKADWDTLFEPYPFFESYKNYLQIDITA 378
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
+NA D RQWKGWVESRLRQL IER G+LQC +PG+FS+NS + C YFMGL R
Sbjct: 379 ENADDLRQWKGWVESRLRQLTLKIERHTYGMLQCHPHPGEFSDNS-RPFHHC-YFMGLQR 436
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRP 480
KQGV +GE+FD+RLTVEEFK H V Y+ WK GM IHVSH++ ++IP+++FPGGVRP
Sbjct: 437 KQGVPVNEGEQFDIRLTVEEFK-HSVNAYTLWKPGMNIHVSHVKRRNIPNYIFPGGVRP 494
>gi|224135441|ref|XP_002322074.1| predicted protein [Populus trichocarpa]
gi|222869070|gb|EEF06201.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/484 (64%), Positives = 377/484 (77%), Gaps = 7/484 (1%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS PT DV T+ELEK L D L+ S+EE++ R EVLGRLD IVK+W+K ++ K
Sbjct: 11 EPISLGGPTEYDVTKTRELEKFLQDAGLYESQEEAVSREEVLGRLDQIVKNWVKVISRAK 70
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
+ +E+ +QEANAK+FTFGSYRLGV GP DID LCVGP +ATR +DFFG+L RML E P
Sbjct: 71 RL-NEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHRMLSEMP 129
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVPDA VPV++FKF GVS+DLLYA+L VIPEDLD QDS+LHN DEQTV SL
Sbjct: 130 EVTELHPVPDAHVPVMRFKFKGVSIDLLYAKLSLWVIPEDLDVSQDSMLHNADEQTVRSL 189
Query: 182 NGCRVTDRILSLVPNIR---NFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQ 238
NGCRVTD+IL LVPNI+ NFR+TLRC+RFWAKRRG+YSN GFLGGINWALLVAR+CQ
Sbjct: 190 NGCRVTDQILRLVPNIQAMQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQ 249
Query: 239 LYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITP 298
L+PNALPN+LVSRFF+++ W+WPNPVMLC I+ ++ VWDPR N +DR HLMPIITP
Sbjct: 250 LFPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLMPIITP 309
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIH 358
+YP NSSYNVSS+TLRIM EEFQR E+CE +E K W TLFEP+ FF ++KNYLQI
Sbjct: 310 AYPSMNSSYNVSSSTLRIMTEEFQRGNEICEAMEVSKAEWDTLFEPFSFFEAYKNYLQID 369
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMG 418
I+A+N D RQWKGWVESRLRQL IER +LQC +PG+FS+ S C YFMG
Sbjct: 370 ISAENEDDLRQWKGWVESRLRQLTLKIERHTYNMLQCHPHPGEFSDKS--RPLHCSYFMG 427
Query: 419 LGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGV 478
L RKQGV +GE+FD+R+TV+EFK+ V MY+ WK GM+I V+H++ ++IP+FVFP GV
Sbjct: 428 LQRKQGVPVNEGEQFDIRITVDEFKNSVN-MYTLWKPGMEIRVTHVKKRNIPNFVFPSGV 486
Query: 479 RPPK 482
RP +
Sbjct: 487 RPSR 490
>gi|297850192|ref|XP_002892977.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297338819|gb|EFH69236.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 716
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/702 (51%), Positives = 440/702 (62%), Gaps = 71/702 (10%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS PT LDVI T+ELEK L D L+ S+EE++ R EVLG LD IVK WIK ++ K
Sbjct: 15 EPISLGGPTELDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILDQIVKTWIKTISRTK 74
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G++DE + ANAK+FTFGSYRLGV GP DID LCVGP +ATR DFFG+L RML E P
Sbjct: 75 GLNDE-LLHLANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGDFFGELQRMLSEMP 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVPDA VP++ FK NGVS+DLLYAQL VIPEDLD QDS+L N DEQTV SL
Sbjct: 134 EVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDISQDSILQNADEQTVRSL 193
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD+IL LVPNI+NFR+TLRC+RFWAKRRG+YSN GFLGGINWALLVAR+CQLYP
Sbjct: 194 NGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLYP 253
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NALPN+L SRFF+++ W+WPNPV+LC + + VWDPR N +DR H+MPIITP+YP
Sbjct: 254 NALPNMLASRFFRVYNQWRWPNPVLLCSMDEGSFGLQVWDPRRNPKDRLHIMPIITPAYP 313
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
C NSSYNVS++TLRIM EFQR KE+CE +EA K W TLFEP+ FF ++KNYLQI I+A
Sbjct: 314 CMNSSYNVSASTLRIMTGEFQRGKEICEAMEANKADWDTLFEPFAFFEAYKNYLQIDISA 373
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
N D R+WKGWVESRLRQL IER +LQC +P DF + S C YFMGL R
Sbjct: 374 ANVNDLRKWKGWVESRLRQLTLKIERHTYDMLQCHPHPHDFQDAS--RPLHCSYFMGLQR 431
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPP 481
KQGV +GE+FD+R TVEEFK H V Y+ W GM+I VSH++ + +P++VFPGGVRP
Sbjct: 432 KQGVPAAEGEQFDIRRTVEEFK-HTVNAYTLWIPGMEISVSHIKRRSLPNYVFPGGVRPS 490
Query: 482 KS------LNEKKRKR------IEVIESTKLKKSESSTAGHSS---GQKSSQTESGVALD 526
+ N + R +T + S S AG +S G+K ++ D
Sbjct: 491 HTSKGTWDSNRRSEHRNSSTSSALAAATTTTEMSSESKAGSNSPVDGKKRKWGDNETLTD 550
Query: 527 GSHGLK-----------SGPSVEPSTSSVSSS------TSASSRP-------------QR 556
K G S PS S+ SS T+ S P +
Sbjct: 551 QLRKSKHIAVSVPVENCEGGSPNPSVGSICSSPMKDYCTNGKSEPISKDPPENVVAFSKE 610
Query: 557 PAVSI-------------ETEDDNATSVSQAQNFNQVGATVAAALATGTISSF------- 596
PA S+ ETE+ + Q Q+ VA AT TI F
Sbjct: 611 PAESLPIEKIATPQAPSQETEELEESFDFGNQVVEQISHKVAILTATATIPPFEATSNGS 670
Query: 597 -CQNESLEELEPPELTAP-CFKTAFVATQKPIIKLQFSSLVK 636
NE++EELE + P V +KPIIKL F+SL K
Sbjct: 671 AFPNEAVEELEVLPMRQPDAAHRPSVQQRKPIIKLSFTSLGK 712
>gi|148910690|gb|ABR18412.1| unknown [Picea sitchensis]
Length = 712
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/482 (62%), Positives = 375/482 (77%), Gaps = 4/482 (0%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS P+ D I T ELEK LV L+ S+EE++ R EVLGRLD IVK W+++++ +K
Sbjct: 20 EPISLGGPSEFDYIKTAELEKFLVSAGLYESQEEAVRREEVLGRLDQIVKVWVRKISRNK 79
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G E+ +QEANAK+FTFGSYRLGV GP DID LCVGP +ATR +DFF +L+ ML + P
Sbjct: 80 GFG-EQVVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFIELYEMLADMP 138
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVPDA VPV+KFKFNG+S+DLLYA+L VIPEDLD QDS+L N DEQTV SL
Sbjct: 139 EVTELHPVPDAHVPVMKFKFNGISIDLLYAKLSLWVIPEDLDISQDSILRNADEQTVRSL 198
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD+IL LVPNI+NFR+TLRC++ WAKRRG+YSN GFLGG+NWALLVAR+CQLYP
Sbjct: 199 NGCRVTDQILRLVPNIQNFRTTLRCMKLWAKRRGVYSNVAGFLGGVNWALLVARICQLYP 258
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NALP++LV RFF+++ W+WPNPVMLC I+ + VWDPR N RDR H MPIITP+YP
Sbjct: 259 NALPSMLVCRFFRVYTQWRWPNPVMLCAIEEGPLGLPVWDPRKNPRDRLHQMPIITPAYP 318
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
C NSSYNVSS+TLR+M EEFQR+ ++CEE+E K W LFE Y FF ++KNYL+I I+A
Sbjct: 319 CMNSSYNVSSSTLRVMTEEFQRSNQICEELELNKVCWNILFETYPFFEAYKNYLEIDISA 378
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
+ A D R+WKGW ESRLR L IER G+LQC +P DFS+ + C +FMGL R
Sbjct: 379 EGADDLRKWKGWTESRLRLLTLKIERQTFGMLQCHPHPDDFSDP--QRPYHCCFFMGLQR 436
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPP 481
KQG+ Q+GE+FD+R+TV+EF+ H V MY+ WKQGM+I+VSH+R ++IP FVFPGGVRPP
Sbjct: 437 KQGMPIQEGEQFDIRVTVDEFR-HSVKMYTLWKQGMEINVSHIRRRNIPLFVFPGGVRPP 495
Query: 482 KS 483
++
Sbjct: 496 RT 497
>gi|356522834|ref|XP_003530048.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/479 (64%), Positives = 372/479 (77%), Gaps = 4/479 (0%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS + PT D I T ELEK L L+ S+EE++ R EVLGRLD IVK W+K ++ K
Sbjct: 20 EPISLAGPTDDDAIKTLELEKYLQGVGLYESQEEAVVREEVLGRLDQIVKIWVKNISRAK 79
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G +E+ + EANAK+FT GSYRLGV GP DID LCVGP +A+R +DFFG L +ML E
Sbjct: 80 GF-NEQLVHEANAKIFTSGSYRLGVHGPGADIDTLCVGPRHASRDEDFFGGLQKMLSEMQ 138
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVPDA VPV+KFKFNGVSVDLLYA+L VIPEDLD Q+S+L ++DEQTVLSL
Sbjct: 139 EVTELHPVPDAHVPVVKFKFNGVSVDLLYARLALWVIPEDLDISQESILQSVDEQTVLSL 198
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD++L LVPNI+ FR+TLRC+RFWAKRRG+YSN GFLGGIN ALLVAR+CQLYP
Sbjct: 199 NGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGINLALLVARICQLYP 258
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NALP++LVSRFF+++ W+WPNPVMLC I+ ++ VWDPR N +DR HLMPIITP YP
Sbjct: 259 NALPDMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLPVWDPRRNPKDRYHLMPIITPVYP 318
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
C NS+YNV+S+TLR+M +EF+R E+CE +EA K W TLFEPY FF S+KNYLQI I A
Sbjct: 319 CMNSTYNVTSSTLRVMSDEFRRGSEICEAMEASKADWDTLFEPYPFFESYKNYLQIDITA 378
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
+NA D RQWKGWV SRLRQL IER G+LQC +PG+FS+NS + C YFMGL R
Sbjct: 379 ENADDLRQWKGWVGSRLRQLTLKIERHTYGMLQCHPHPGEFSDNS-RPFHHC-YFMGLQR 436
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRP 480
KQGV +GE+FD+RLTVEEFK H V Y+ WK GM IHVSH++ +IP+++FPGGVRP
Sbjct: 437 KQGVPVNEGEQFDIRLTVEEFK-HSVNAYTLWKPGMDIHVSHVKRSNIPNYIFPGGVRP 494
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 594 SSFCQNESLEELEPPELTAPCFK--TAFVATQKPIIKLQFSSLVK 636
+ C NESLEELEP ELTAP A V +KP+I+L F+SL K
Sbjct: 707 THLCSNESLEELEPAELTAPLLSGPPAPVPMKKPLIRLNFTSLGK 751
>gi|357521515|ref|XP_003631046.1| Poly(A) polymerase [Medicago truncatula]
gi|355525068|gb|AET05522.1| Poly(A) polymerase [Medicago truncatula]
Length = 822
Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust.
Identities = 327/602 (54%), Positives = 405/602 (67%), Gaps = 48/602 (7%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS S PT DV T+ELEK L D L+ +++E++ R EVLGRLD IVK W+K + K
Sbjct: 21 EPISLSGPTEYDVAKTRELEKYLQDAGLYENQDEAICREEVLGRLDQIVKIWVKTICRAK 80
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G +E+ ++EANA +FTFGSYRLGV GP DID LCVGP +ATR +DFFG+L +ML E P
Sbjct: 81 GF-NEQLVKEANAMIFTFGSYRLGVHGPGADIDVLCVGPRHATRKEDFFGELHKMLSEMP 139
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVPDA VPV+ FKFNGVS+DLLYAQL VIPEDLD Q+++L DEQTV SL
Sbjct: 140 EVTELHPVPDAHVPVMGFKFNGVSLDLLYAQLSLWVIPEDLDLSQEAILQYTDEQTVRSL 199
Query: 182 NGCRVTDRILSLVPNIR-----------------------------NFRSTLRCLRFWAK 212
NGCRVTD+IL LVPNI+ NFR+TLRC++ WAK
Sbjct: 200 NGCRVTDQILHLVPNIQVDKYRTFTFSFDMTSGFHVIDYISISQVQNFRTTLRCVKLWAK 259
Query: 213 RRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQY 272
RG+YSN GFLGGINWALLV R+CQLYPNALPN+LVSRFF+++ W+WPNPVMLC I+
Sbjct: 260 CRGVYSNVAGFLGGINWALLVGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCTIKE 319
Query: 273 QAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIE 332
++ VWDPR N +D+ HLMPIITP+YPC NSSYNVS +TLR+M EEFQR E+CE +E
Sbjct: 320 GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSLSTLRVMTEEFQRGDEICEAME 379
Query: 333 AGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGV 392
A K W TLFEPY FF S+KNYL+I I+A+N D R WKGWV+SRLRQL IER+ G+
Sbjct: 380 ANKADWDTLFEPYPFFESYKNYLRIDISAENVDDLRNWKGWVKSRLRQLTLKIERNTYGM 439
Query: 393 LQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS 452
LQC +PGDFS+ S C YFMGL RKQGV +G +FDMRLTVEEFK H V Y+
Sbjct: 440 LQCHPHPGDFSDKS--RPLHCSYFMGLQRKQGVPANEGGQFDMRLTVEEFK-HSVNAYTQ 496
Query: 453 WKQGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSS 512
WK GM I +SH++ ++IP FVFPGGVRP K + ++SE +GH
Sbjct: 497 WKPGMNISISHVKRRNIPAFVFPGGVRP---------KCPSKVTWVSKRRSELRVSGHGQ 547
Query: 513 GQKSSQTESGVALDGSHGLKSGPSVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVS 572
+KS + G L G++ + E S + +S S SS P P+ ED N S++
Sbjct: 548 AEKS---QVGKEL-GANNDRKRKQAEDSGDDLRNSRSFSSLP--PSSRDVHEDGNPVSIA 601
Query: 573 QA 574
+
Sbjct: 602 NS 603
>gi|42562141|ref|NP_173240.2| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|9665075|gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis
thaliana gb|AF255297 and contains a
Nucleotidyltransferase PF|01909 domain. ESTs
gb|AV536592, gb|AV553256, gb|AV561630, gb|AV532289 come
from this gene [Arabidopsis thaliana]
gi|29029092|gb|AAO64925.1| At1g17980 [Arabidopsis thaliana]
gi|32527642|gb|AAP86214.1| poly(A) polymerase [Arabidopsis thaliana]
gi|110743114|dbj|BAE99449.1| hypothetical protein [Arabidopsis thaliana]
gi|332191538|gb|AEE29659.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 713
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 357/700 (51%), Positives = 432/700 (61%), Gaps = 70/700 (10%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS PT DVI T+ELEK L D L+ S+EE++ R EVLG LD IVK WIK ++ K
Sbjct: 15 EPISMGGPTEFDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILDQIVKTWIKTISRAK 74
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G++D+ + EANAK+FTFGSYRLGV GP DID LCVGP +ATR DFFG+L RML E P
Sbjct: 75 GLNDQ-LLHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGDFFGELQRMLSEMP 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVPDA VP++ FK NGVS+DLLYAQL VIPEDLD QDS+L N DEQTV SL
Sbjct: 134 EVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNADEQTVRSL 193
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD+IL LVPNI+NFR+TLRC+RFWAKRRG+YSN GFLGGINWALLVAR+CQLYP
Sbjct: 194 NGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLYP 253
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NALPN+LVSRFF++F W WPN + LC ++ VWDPR N +DR H+MPIITP+YP
Sbjct: 254 NALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPIITPAYP 313
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
C NSSYNVS +TLRIM+ EFQR E+CE +E+ K W TLFEP+ FF ++KNYLQI I+A
Sbjct: 314 CMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAFFEAYKNYLQIDISA 373
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
N D R+WKGWVESRLRQL IER +L C +P DF + S C YFMGL R
Sbjct: 374 ANVDDLRKWKGWVESRLRQLTLKIERHF-KMLHCHPHPHDFQDTS--RPLHCSYFMGLQR 430
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPP 481
KQGV +GE+FD+R TVEEFK H V Y+ W GM+I V H++ + +P+FVFPGGVRP
Sbjct: 431 KQGVPAAEGEQFDIRRTVEEFK-HTVNAYTLWIPGMEISVGHIKRRSLPNFVFPGGVRPS 489
Query: 482 KS------LNEKKRKR------IEVIESTKLKKSESSTAGHSS---GQKSSQTESGVALD 526
+ N + R +T + S S AG +S G+K +S D
Sbjct: 490 HTSKGTWDSNRRSEHRNSSTSSAPAATTTTTEMSSESKAGSNSPVDGKKRKWGDSETLTD 549
Query: 527 GSHGLK-----------SGPSVEPSTSSVSSS------TSASSRP-------------QR 556
K G S PS S+ SS T+ S P +
Sbjct: 550 QPRNSKHIAVSVPVENCEGGSPNPSVGSICSSPMKDYCTNGKSEPISKDPPENVVAFSKD 609
Query: 557 PAVSI-----------ETEDDNATSVSQAQNFNQVGATVAAALATGTISSFCQN------ 599
P S+ ETE+ + Q Q+ VA AT TI F
Sbjct: 610 PPESLPIEKIATPQAHETEELEESFDFGNQVIEQISHKVAVLSATATIPPFEATSNGSPF 669
Query: 600 --ESLEELEP-PELTAPCFKTAFVATQKPIIKLQFSSLVK 636
E++EELE P V +KPIIKL F+SL K
Sbjct: 670 PYEAVEELEVLPTRQPDAAHRPSVQQRKPIIKLSFTSLGK 709
>gi|302774344|ref|XP_002970589.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
gi|300162105|gb|EFJ28719.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
Length = 534
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 285/484 (58%), Positives = 374/484 (77%), Gaps = 5/484 (1%)
Query: 1 MEIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMD 60
ME +ST+ PT D+ T++LEK+L + L S EE++ R VLGRLD IVK W++++ ++
Sbjct: 1 MEPLSTAGPTPADLGRTRDLEKLLSNAGLNESREEAMKREGVLGRLDQIVKSWVRQICVN 60
Query: 61 KGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQET 120
KG S+E +QEANAK+FTFGSYRLGV GP +DID LCVGP +ATR +DFF +L +L ET
Sbjct: 61 KGFSNE-VVQEANAKIFTFGSYRLGVHGPGSDIDTLCVGPSHATREEDFFVELHNILAET 119
Query: 121 PLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
V +L PVP+A VPV+KFKF+G+S+DLLYA+L IPEDLD +S++ NLDEQ+VLS
Sbjct: 120 ENVTELNPVPEAHVPVMKFKFDGISIDLLYARLSSWTIPEDLDISDESIMQNLDEQSVLS 179
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNGCRVTD+IL LVPNI++FR+TLRC+++WAKRRG+YSN GFLGGINWALLVAR+CQLY
Sbjct: 180 LNGCRVTDQILRLVPNIQHFRTTLRCMKYWAKRRGVYSNVTGFLGGINWALLVARICQLY 239
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPH--HVWDPRSNQRDRKHLMPIITP 298
PNA+P+ L+SRFF+++ W+WPNPVMLCPI+ ++ VWDPR N RD+ HLMPIITP
Sbjct: 240 PNAVPSTLISRFFRVYTQWRWPNPVMLCPIEERSSLGLLQVWDPRKNPRDKSHLMPIITP 299
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIH 358
+YPC NSSYNVS++TLRIM +EF R E+CE++E + TW LFE + FF +++NYLQI
Sbjct: 300 AYPCMNSSYNVSTSTLRIMTQEFNRGNEVCEQLEMSRATWDLLFESFSFFEAYRNYLQID 359
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMG 418
+ A + D R WKGWVESRLRQL +E+D G+LQC +P DF + + + C YFMG
Sbjct: 360 VVAIDDCDHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDMA-RDGYHCAYFMG 418
Query: 419 LGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGV 478
L RK G +G++FD+R TVE+FK +V Y+SWKQGM+I+VSH+R + IP FV+PGGV
Sbjct: 419 LQRKLGAPLHEGQQFDIRTTVEQFKLNVA-AYTSWKQGMEIYVSHVRRKQIPLFVYPGGV 477
Query: 479 RPPK 482
+P +
Sbjct: 478 KPAR 481
>gi|302770018|ref|XP_002968428.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
gi|300164072|gb|EFJ30682.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
Length = 534
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 285/484 (58%), Positives = 373/484 (77%), Gaps = 5/484 (1%)
Query: 1 MEIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMD 60
ME +ST+ PT D+ T++LEK+L + L S EE++ R VLGRLD IVK W++++ ++
Sbjct: 1 MEPLSTAGPTPADLGRTRDLEKLLSNAGLNESREEAMKREGVLGRLDQIVKSWVRQICVN 60
Query: 61 KGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQET 120
KG S+E +QEANAK+FTFGSYRLGV GP +DID LCVGP +ATR +DFF +L +L ET
Sbjct: 61 KGFSNE-VVQEANAKIFTFGSYRLGVHGPGSDIDTLCVGPSHATREEDFFVELHNILAET 119
Query: 121 PLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
V +L PVP+A VPV+KFKF+G+S+DLLYA+L IPEDLD +S++ NLDEQ+VLS
Sbjct: 120 ENVTELNPVPEAHVPVMKFKFDGISIDLLYARLSSWTIPEDLDISDESIMQNLDEQSVLS 179
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNGCRVTD+IL LVPNI++FR+TLRC+++WAKRRG+YSN GFLGGINWALLVAR+CQLY
Sbjct: 180 LNGCRVTDQILRLVPNIQHFRTTLRCMKYWAKRRGVYSNVTGFLGGINWALLVARICQLY 239
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPH--HVWDPRSNQRDRKHLMPIITP 298
PNA+P+ LVSRFF+++ W+WPNPVMLCPI+ ++ VWDPR N RD+ HLMPIITP
Sbjct: 240 PNAVPSTLVSRFFRVYTQWRWPNPVMLCPIEERSSLGLLQVWDPRKNPRDKSHLMPIITP 299
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIH 358
+YPC NSSYNVS++TLRIM +EF R E+CE++E + TW LFE + FF +++NYLQI
Sbjct: 300 AYPCMNSSYNVSTSTLRIMTQEFNRGNEVCEQLEMSRATWDLLFESFSFFEAYRNYLQID 359
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMG 418
+ A + D R WKGWVESRLRQL +E+D G+LQC +P DF + + + C YFMG
Sbjct: 360 VVAIDDCDHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDMA-RDGYHCAYFMG 418
Query: 419 LGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGV 478
L RK G +G++FD+R TVE+FK +V Y+SWK GM+I+VSH+R + IP FV+PGGV
Sbjct: 419 LQRKLGAPLHEGQQFDIRTTVEQFKLNVA-AYTSWKPGMEIYVSHVRRKQIPLFVYPGGV 477
Query: 479 RPPK 482
+P +
Sbjct: 478 KPAR 481
>gi|302804859|ref|XP_002984181.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
gi|300148030|gb|EFJ14691.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
Length = 496
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 289/484 (59%), Positives = 362/484 (74%), Gaps = 6/484 (1%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IST+ PT D T++LEK+L + L+ S EE++ R EVLGRLD +VK+W+K + + K
Sbjct: 14 EPISTAGPTEADFARTRDLEKVLTEAGLYESPEEAVQREEVLGRLDQLVKEWVKNICLRK 73
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G S E+ QEANAK+FTFGSYRLGV GP TDID LCVGP + +R +DFFG ML+
Sbjct: 74 GYS-EQVTQEANAKIFTFGSYRLGVHGPGTDIDTLCVGPRHVSREEDFFGVFHGMLEAMS 132
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVPDA VPV++FKF+G+S+DLLYA L IPEDLD Q+S+L NLDE +V SL
Sbjct: 133 EVTELHPVPDAHVPVMRFKFSGISIDLLYAPLAVWTIPEDLDISQESILRNLDEPSVRSL 192
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD+IL LVPNI +FR+TLRC++ WA++RG+YSN GFLGG+NWALLVAR+CQLYP
Sbjct: 193 NGCRVTDQILRLVPNIEHFRTTLRCMKLWARKRGVYSNVTGFLGGVNWALLVARICQLYP 252
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NALP++LVSRFF+++ W+WPNPVMLC I+ ++ VWDPR N RDR H MPIITP+YP
Sbjct: 253 NALPSMLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPRDRTHQMPIITPAYP 312
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
C NSSYNVSS+TLR+M EEF RA +CE IE K W LFEPY FF ++KNYLQI + A
Sbjct: 313 CMNSSYNVSSSTLRVMVEEFSRANGICEVIEMNKAEWSALFEPYAFFDAYKNYLQIDVFA 372
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
+ D R+WKGWVESRLRQL IE+ G+LQC +P DF + S K C +FMGL +
Sbjct: 373 ADNDDLRRWKGWVESRLRQLTLKIEKHTYGMLQCHPHPCDFVDES-KEGKHCAFFMGLQK 431
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGG---V 478
+QG+ Q+G++FD+RLTVEEF+ V Y WK+GM I VSH+R + IP +VFPGG
Sbjct: 432 RQGLPSQEGQQFDIRLTVEEFRQSVT-GYQLWKEGMDIAVSHVRRRQIPAYVFPGGTKPA 490
Query: 479 RPPK 482
RPPK
Sbjct: 491 RPPK 494
>gi|53792977|dbj|BAD54151.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
Length = 740
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 292/549 (53%), Positives = 382/549 (69%), Gaps = 10/549 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D+ T ELEK LV+ L+ S EES R EVLG LD IVKDW+K++T +G
Sbjct: 26 ISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDWVKQLTSQRGY 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ ++EANA LFTFGSYRLGV GP DID LCVGP Y R +DFF L +L +T V
Sbjct: 86 TDQ-MVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF+G+S+DLLYA + V+P DLD Q S+L+++DE TV SLNG
Sbjct: 145 TELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEVTVRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN+ NFR+TLRCL++WAK+RG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 205 CRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF++F W+WPNPVMLC I+ + VWDPR RDR H MPIITP+YPC
Sbjct: 265 VPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCM 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS++TLR+M E+FQ ++C+EI+ K W LFEP+ FF ++KNYLQ+ I A++
Sbjct: 325 NSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNYLQVDIIAED 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
D R WKGWVESRLRQL IERD G+LQC YP ++++ S + + C +FMGL RK+
Sbjct: 385 GEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPS-RQCAHCAFFMGLSRKE 443
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKS 483
G Q+G++FD+R TV+EF+ H + MY W+ GM++ VSH+R + IP +VFP G + P
Sbjct: 444 GAKIQEGQQFDIRGTVDEFR-HDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRP-- 500
Query: 484 LNEKKRKRIEVIESTKLKKSESSTAGHS-SGQKSSQTESGVALDGSHGLK-SGPSVEPST 541
+ + I + + E TA S GQ + ++ D G S+ PS
Sbjct: 501 ---RPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASISPSI 557
Query: 542 SSVSSSTSA 550
S V TS+
Sbjct: 558 SPVHQKTSS 566
>gi|224284360|gb|ACN39915.1| unknown [Picea sitchensis]
Length = 701
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 323/679 (47%), Positives = 433/679 (63%), Gaps = 54/679 (7%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS S P+ D+ ++ELE+ LV L+ SEEES R EVL ++D IVK W+K++T +KG
Sbjct: 26 ISLSGPSGSDLQRSRELEEFLVSAGLYESEEESALREEVLAQIDQIVKQWVKQLTREKGY 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ E+ ++E+NAK+FTFGSYRLGV GP DID LCVGP YA + +DFF L ML E P V
Sbjct: 86 T-EQMVEESNAKVFTFGSYRLGVHGPGADIDTLCVGPEYADQEEDFFILLHDMLAEMPEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L VPDA VPV+KFKF G+S+DLLYA + ++P+DLD Q+S+L+N+DEQTV SLNG
Sbjct: 145 MELNRVPDAHVPVMKFKFRGISIDLLYASVALRIVPDDLDISQESVLYNVDEQTVRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV ++IL LVPN+ +FR+TLRC++FWAKRRG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 205 CRVNEQILRLVPNVEHFRTTLRCMKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF++F W+WPNPVML I+ + + VWDPR N RDR H MPIITP+YP
Sbjct: 265 IPSMLVSRFFRVFTQWRWPNPVMLRSIKEEELGFPVWDPRKNPRDRTHHMPIITPAYPGM 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS++TLR+M E+FQ+ ++CE+IE K W LF+PY FF ++KNYLQ+ I A +
Sbjct: 325 NSSYNVSTSTLRVMTEQFQQGNKMCEDIEMNKANWSALFDPYPFFEAYKNYLQVDIVAAD 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
D R WKGWVESRLRQL IERD G+LQC YP ++ +NS K C +FMGL RKQ
Sbjct: 385 QDDLRLWKGWVESRLRQLTLKIERDTFGMLQCHPYPTEYVDNS-KQCPHCAFFMGLQRKQ 443
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVR---- 479
GV Q+G++FD+R TV+EF+ V MY WK GM I+VSH+R + IP +VFP GVR
Sbjct: 444 GVLIQEGQQFDIRGTVDEFR-QSVGMYMFWKPGMDIYVSHVRRKQIPSYVFPEGVRRVRS 502
Query: 480 -----------------PPKSLN----------------EKKRKRIEVIESTKLKKSESS 506
PK N EK KR + +T + K+E
Sbjct: 503 GRAANQIGKTSPQGRESSPKCCNGNFGDDIVEECNANSAEKANKRKHDM-TTDVGKAEKR 561
Query: 507 TAGHSSGQKS-SQTESGVALDGSHGLKSGPSVEPSTSSVSSSTSASSRP----QRPAVSI 561
A + KS S + S V+ ++ + EP SS ++ A ++P ++P+
Sbjct: 562 AAVSPNDVKSASLSVSDVSNRSGLASQTSSAEEPDHSSSTAGYGAIAKPVEVGEKPSKGC 621
Query: 562 ETEDD---NATSVSQAQNFNQVGATVAAALATGTISSFCQNESLEELEPP---ELTAPCF 615
D S +Q ++ ++G+ + + CQN S EELE E+ P
Sbjct: 622 VKNGDQLEQKRSFTQKESVEEIGSGKGLQNSCILRAGKCQNGS-EELESSINVEMILPSH 680
Query: 616 KTAFVAT-QKPIIKLQFSS 633
T QKP++++ +S
Sbjct: 681 AGVKSETVQKPVLRVSLAS 699
>gi|297724965|ref|NP_001174846.1| Os06g0558700 [Oryza sativa Japonica Group]
gi|255677141|dbj|BAH93574.1| Os06g0558700 [Oryza sativa Japonica Group]
Length = 708
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 292/549 (53%), Positives = 382/549 (69%), Gaps = 10/549 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D+ T ELEK LV+ L+ S EES R EVLG LD IVKDW+K++T +G
Sbjct: 26 ISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDWVKQLTSQRGY 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ ++EANA LFTFGSYRLGV GP DID LCVGP Y R +DFF L +L +T V
Sbjct: 86 TDQ-MVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF+G+S+DLLYA + V+P DLD Q S+L+++DE TV SLNG
Sbjct: 145 TELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEVTVRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN+ NFR+TLRCL++WAK+RG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 205 CRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF++F W+WPNPVMLC I+ + VWDPR RDR H MPIITP+YPC
Sbjct: 265 VPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCM 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS++TLR+M E+FQ ++C+EI+ K W LFEP+ FF ++KNYLQ+ I A++
Sbjct: 325 NSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNYLQVDIIAED 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
D R WKGWVESRLRQL IERD G+LQC YP ++++ S + + C +FMGL RK+
Sbjct: 385 GEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPS-RQCAHCAFFMGLSRKE 443
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKS 483
G Q+G++FD+R TV+EF+ H + MY W+ GM++ VSH+R + IP +VFP G + P+
Sbjct: 444 GAKIQEGQQFDIRGTVDEFR-HDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRP 502
Query: 484 LNEKKRKRIEVIESTKLKKSESSTAGHS-SGQKSSQTESGVALDGSHGLK-SGPSVEPST 541
+ I + + E TA S GQ + ++ D G S+ PS
Sbjct: 503 -----SRHINHPQQSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASISPSI 557
Query: 542 SSVSSSTSA 550
S V TS+
Sbjct: 558 SPVHQKTSS 566
>gi|302780986|ref|XP_002972267.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
gi|300159734|gb|EFJ26353.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
Length = 548
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 289/498 (58%), Positives = 366/498 (73%), Gaps = 11/498 (2%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IST+ PT D T++LEK+L + L+ S EE++ R EVLGRLD +VK+W+K + + K
Sbjct: 14 EPISTAGPTEADFARTRDLEKVLTEAGLYESPEEAVQREEVLGRLDQLVKEWVKNICLRK 73
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G S E+ QEANAK+FTFGSYRLGV GP TDID LCVGP + +R +DFFG ML+
Sbjct: 74 GYS-EQLTQEANAKIFTFGSYRLGVHGPGTDIDTLCVGPRHVSREEDFFGVFHGMLEAMS 132
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVPDA VPV++FKF+G+S+DLLYA L IPEDLD Q+S+L NLDE +V SL
Sbjct: 133 EVTELHPVPDAHVPVMRFKFSGISIDLLYAPLAVWTIPEDLDISQESILRNLDEPSVRSL 192
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD+IL LVPNI +FR+TLRC++ WA++RG+YSN GFLGG+NWALLVAR+CQLYP
Sbjct: 193 NGCRVTDQILRLVPNIEHFRTTLRCMKLWARKRGVYSNVTGFLGGVNWALLVARICQLYP 252
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NALP++LVSRFF+++ W+WPNPVMLC I+ ++ VWDPR N RDR H MPIITP+YP
Sbjct: 253 NALPSMLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPRDRTHQMPIITPAYP 312
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
C NSSYNVSS+TLR+M EEF RA +CE IE K W LFEPY FF ++KNYLQI + A
Sbjct: 313 CMNSSYNVSSSTLRVMVEEFSRANGICEVIEMNKAEWSALFEPYAFFDAYKNYLQIDVFA 372
Query: 362 KNAGDFRQWKGWVESRLRQLI------HMIERDMGGVLQCRLYPGDFSENSVKSSSQCHY 415
+ D R+WKGWVESRLRQL IE+ G+LQC +P DF + S K C +
Sbjct: 373 ADNDDLRRWKGWVESRLRQLTLKVGLDREIEKHTYGMLQCHPHPCDFVDES-KEGKHCAF 431
Query: 416 FMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFP 475
FMGL ++QG+ Q+G++FD+RLTVEEF+ V Y WK+GM I VSH+R + IP +VFP
Sbjct: 432 FMGLQKRQGLPSQEGQQFDIRLTVEEFRQSVT-GYQLWKEGMDIAVSHVRRRQIPAYVFP 490
Query: 476 GGVRP--PKSLNEKKRKR 491
GG +P P L+ ++ R
Sbjct: 491 GGTKPARPPKLSSSRKAR 508
>gi|58220767|gb|AAW68015.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 708
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 292/549 (53%), Positives = 382/549 (69%), Gaps = 10/549 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D+ T ELEK LV+ L+ S EES R EVLG LD IVKDW+K++T +G
Sbjct: 26 ISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDWVKQLTSQRGY 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ ++EANA LFTFGSYRLGV GP DID LCVGP Y R +DFF L +L +T V
Sbjct: 86 TDQ-MVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF+G+S+DLLYA + V+P DLD Q S+L+++DE TV SLNG
Sbjct: 145 TELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEVTVRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN+ NFR+TLRCL++WAK+RG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 205 CRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF++F W+WPNPVMLC I+ + VWDPR RDR H MPIITP+YPC
Sbjct: 265 VPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCM 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS++TLR+M E+FQ ++C+EI+ K W LFEP+ FF ++KNYLQ+ I A++
Sbjct: 325 NSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNYLQVDIIAED 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
D R WKGWVESRLRQL IERD G+LQC YP ++++ S + + C +FMGL RK+
Sbjct: 385 GEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPS-RQCAHCAFFMGLSRKE 443
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKS 483
G Q+G++FD+R TV+EF+ H + MY W+ GM++ VSH+R + IP +VFP G + P+
Sbjct: 444 GAKIQEGQQFDIRGTVDEFR-HDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRP 502
Query: 484 LNEKKRKRIEVIESTKLKKSESSTAGHS-SGQKSSQTESGVALDGSHGLK-SGPSVEPST 541
+ I + + E TA S GQ + ++ D G S+ PS
Sbjct: 503 -----SRHINHPQQSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASISPSI 557
Query: 542 SSVSSSTSA 550
S V TS+
Sbjct: 558 SPVHQKTSS 566
>gi|225442450|ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 770
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 284/488 (58%), Positives = 362/488 (74%), Gaps = 6/488 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT +D+ + ELEK LVD L+ S+EE++ R EVL RL IVKDW+K++T +G
Sbjct: 25 ISVAGPTEVDIQRSLELEKFLVDAGLYESKEEAIKRAEVLDRLGQIVKDWVKQLTRLRGY 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ +++ANA LFTFGSYRLGV GP TDID LC+GP Y +R +DFF L +L + V
Sbjct: 85 TDQ-MVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGPSYVSREEDFFFILHNILADMEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF+G+S+DLLYA + V+PEDLD S+L+N+DE TV SLNG
Sbjct: 144 TELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPEDLDISDLSVLYNIDEPTVRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN+ +F +TLRCL+FWAKRRG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 204 CRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WPNPVMLC I+ + VWDPR N RDR H MPIITP+YPC
Sbjct: 264 VPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPIITPAYPCM 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS +TLR+M E+FQ ++CE IE W LFEPY FF S+KNYLQ+ I A +
Sbjct: 324 NSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWGALFEPYLFFESYKNYLQVDIVAVD 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
D R WKGWVESRLRQL MIERD G LQC YP ++ + S K S C +FMGL RKQ
Sbjct: 384 IDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTS-KQCSHCAFFMGLQRKQ 442
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGV---RP 480
G Q+G++FD+R TV+EF+ H + MY WK GM+I+VSH+R + IP +VFP G RP
Sbjct: 443 GEIIQEGQQFDIRGTVDEFR-HSINMYMFWKPGMEIYVSHVRRKQIPSYVFPEGYKRSRP 501
Query: 481 PKSLNEKK 488
+ +N+++
Sbjct: 502 QRPVNQQQ 509
>gi|413943851|gb|AFW76500.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943852|gb|AFW76501.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 702
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 308/639 (48%), Positives = 410/639 (64%), Gaps = 21/639 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S P D+ T+ELEK L++ L+ S +ES R EVLG+LD IVKDW+K++T +G
Sbjct: 17 LSLLGPVEADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIVKDWVKQLTSQRGY 76
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ ++EANA LFTFGSYRLGV GP DID LCVGP Y R +DFF L +L +T V
Sbjct: 77 TDQ-MVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHGILAQTEDV 135
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF+G+S+DLLYA + V+P DLD Q S+L+++DE TV SLNG
Sbjct: 136 TELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDEATVRSLNG 195
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+I+ LVPN NFR+ LRCL++WAKRRG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 196 CRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 255
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF++F W+WPNPVMLC I+ + + VWDPR N RDR H MPIITP+YPC
Sbjct: 256 VPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCM 315
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS++TLR+M E+FQ +C+EIE K +W LFEP+ FF ++KNYLQ+ I A++
Sbjct: 316 NSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAED 375
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
D R WKGWVESRLRQL IERD G+LQC YP ++++ S + + C +FMGL RK+
Sbjct: 376 DEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPS-RQCAHCAFFMGLSRKE 434
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGV---RP 480
GV Q+G++FD+R TV+EF+ H + MY WK GM++ VSH+R + +P +VFP G RP
Sbjct: 435 GVKIQEGQQFDIRGTVDEFR-HEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRP 493
Query: 481 PKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLK--SGPSVE 538
+ +N + K +E TA S + + V D K S V
Sbjct: 494 SRHVNHQSDK----------NDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSPVH 543
Query: 539 PSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISSFCQ 598
P S S ST +R + D + S + Q + T+ +A T + C
Sbjct: 544 PKNSPQSGSTGDETRCNN-QIKRAPSDASGGSPASPQASERSPDTILSAPRCTTTGAVCS 602
Query: 599 NESLEELEPPELTAPCF--KTAFVATQKPIIKLQFSSLV 635
+++ + L C A T K + + S LV
Sbjct: 603 GDAISKHSSVPLVENCTTPTVAVCTTLKRVAEKVVSELV 641
>gi|413943854|gb|AFW76503.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943855|gb|AFW76504.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 686
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 308/639 (48%), Positives = 410/639 (64%), Gaps = 21/639 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S P D+ T+ELEK L++ L+ S +ES R EVLG+LD IVKDW+K++T +G
Sbjct: 17 LSLLGPVEADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIVKDWVKQLTSQRGY 76
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ ++EANA LFTFGSYRLGV GP DID LCVGP Y R +DFF L +L +T V
Sbjct: 77 TDQ-MVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHGILAQTEDV 135
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF+G+S+DLLYA + V+P DLD Q S+L+++DE TV SLNG
Sbjct: 136 TELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDEATVRSLNG 195
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+I+ LVPN NFR+ LRCL++WAKRRG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 196 CRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 255
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF++F W+WPNPVMLC I+ + + VWDPR N RDR H MPIITP+YPC
Sbjct: 256 VPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCM 315
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS++TLR+M E+FQ +C+EIE K +W LFEP+ FF ++KNYLQ+ I A++
Sbjct: 316 NSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAED 375
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
D R WKGWVESRLRQL IERD G+LQC YP ++++ S + + C +FMGL RK+
Sbjct: 376 DEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPS-RQCAHCAFFMGLSRKE 434
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGV---RP 480
GV Q+G++FD+R TV+EF+ H + MY WK GM++ VSH+R + +P +VFP G RP
Sbjct: 435 GVKIQEGQQFDIRGTVDEFR-HEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRP 493
Query: 481 PKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLK--SGPSVE 538
+ +N + K +E TA S + + V D K S V
Sbjct: 494 SRHVNHQSDK----------NDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSPVH 543
Query: 539 PSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISSFCQ 598
P S S ST +R + D + S + Q + T+ +A T + C
Sbjct: 544 PKNSPQSGSTGDETRCNN-QIKRAPSDASGGSPASPQASERSPDTILSAPRCTTTGAVCS 602
Query: 599 NESLEELEPPELTAPCF--KTAFVATQKPIIKLQFSSLV 635
+++ + L C A T K + + S LV
Sbjct: 603 GDAISKHSSVPLVENCTTPTVAVCTTLKRVAEKVVSELV 641
>gi|293335951|ref|NP_001168358.1| uncharacterized protein LOC100382126 [Zea mays]
gi|223947741|gb|ACN27954.1| unknown [Zea mays]
gi|413943856|gb|AFW76505.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 694
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 308/639 (48%), Positives = 410/639 (64%), Gaps = 21/639 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S P D+ T+ELEK L++ L+ S +ES R EVLG+LD IVKDW+K++T +G
Sbjct: 17 LSLLGPVEADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIVKDWVKQLTSQRGY 76
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ ++EANA LFTFGSYRLGV GP DID LCVGP Y R +DFF L +L +T V
Sbjct: 77 TDQ-MVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHGILAQTEDV 135
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF+G+S+DLLYA + V+P DLD Q S+L+++DE TV SLNG
Sbjct: 136 TELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDEATVRSLNG 195
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+I+ LVPN NFR+ LRCL++WAKRRG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 196 CRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 255
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF++F W+WPNPVMLC I+ + + VWDPR N RDR H MPIITP+YPC
Sbjct: 256 VPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCM 315
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS++TLR+M E+FQ +C+EIE K +W LFEP+ FF ++KNYLQ+ I A++
Sbjct: 316 NSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAED 375
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
D R WKGWVESRLRQL IERD G+LQC YP ++++ S + + C +FMGL RK+
Sbjct: 376 DEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPS-RQCAHCAFFMGLSRKE 434
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGV---RP 480
GV Q+G++FD+R TV+EF+ H + MY WK GM++ VSH+R + +P +VFP G RP
Sbjct: 435 GVKIQEGQQFDIRGTVDEFR-HEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRP 493
Query: 481 PKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLK--SGPSVE 538
+ +N + K +E TA S + + V D K S V
Sbjct: 494 SRHVNHQSDK----------NDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSPVH 543
Query: 539 PSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISSFCQ 598
P S S ST +R + D + S + Q + T+ +A T + C
Sbjct: 544 PKNSPQSGSTGDETRCNN-QIKRAPSDASGGSPASPQASERSPDTILSAPRCTTTGAVCS 602
Query: 599 NESLEELEPPELTAPCF--KTAFVATQKPIIKLQFSSLV 635
+++ + L C A T K + + S LV
Sbjct: 603 GDAISKHSSVPLVENCTTPTVAVCTTLKRVAEKVVSELV 641
>gi|413943853|gb|AFW76502.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 696
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 308/639 (48%), Positives = 410/639 (64%), Gaps = 21/639 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S P D+ T+ELEK L++ L+ S +ES R EVLG+LD IVKDW+K++T +G
Sbjct: 17 LSLLGPVEADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIVKDWVKQLTSQRGY 76
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ ++EANA LFTFGSYRLGV GP DID LCVGP Y R +DFF L +L +T V
Sbjct: 77 TDQ-MVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHGILAQTEDV 135
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF+G+S+DLLYA + V+P DLD Q S+L+++DE TV SLNG
Sbjct: 136 TELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDEATVRSLNG 195
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+I+ LVPN NFR+ LRCL++WAKRRG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 196 CRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 255
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF++F W+WPNPVMLC I+ + + VWDPR N RDR H MPIITP+YPC
Sbjct: 256 VPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCM 315
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS++TLR+M E+FQ +C+EIE K +W LFEP+ FF ++KNYLQ+ I A++
Sbjct: 316 NSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAED 375
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
D R WKGWVESRLRQL IERD G+LQC YP ++++ S + + C +FMGL RK+
Sbjct: 376 DEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPS-RQCAHCAFFMGLSRKE 434
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGV---RP 480
GV Q+G++FD+R TV+EF+ H + MY WK GM++ VSH+R + +P +VFP G RP
Sbjct: 435 GVKIQEGQQFDIRGTVDEFR-HEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRP 493
Query: 481 PKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLK--SGPSVE 538
+ +N + K +E TA S + + V D K S V
Sbjct: 494 SRHVNHQSDK----------NDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSPVH 543
Query: 539 PSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISSFCQ 598
P S S ST +R + D + S + Q + T+ +A T + C
Sbjct: 544 PKNSPQSGSTGDETRCNN-QIKRAPSDASGGSPASPQASERSPDTILSAPRCTTTGAVCS 602
Query: 599 NESLEELEPPELTAPCF--KTAFVATQKPIIKLQFSSLV 635
+++ + L C A T K + + S LV
Sbjct: 603 GDAISKHSSVPLVENCTTPTVAVCTTLKRVAEKVVSELV 641
>gi|297743180|emb|CBI36047.3| unnamed protein product [Vitis vinifera]
Length = 677
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 284/488 (58%), Positives = 362/488 (74%), Gaps = 6/488 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT +D+ + ELEK LVD L+ S+EE++ R EVL RL IVKDW+K++T +G
Sbjct: 25 ISVAGPTEVDIQRSLELEKFLVDAGLYESKEEAIKRAEVLDRLGQIVKDWVKQLTRLRGY 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ +++ANA LFTFGSYRLGV GP TDID LC+GP Y +R +DFF L +L + V
Sbjct: 85 TDQ-MVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGPSYVSREEDFFFILHNILADMEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF+G+S+DLLYA + V+PEDLD S+L+N+DE TV SLNG
Sbjct: 144 TELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPEDLDISDLSVLYNIDEPTVRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN+ +F +TLRCL+FWAKRRG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 204 CRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WPNPVMLC I+ + VWDPR N RDR H MPIITP+YPC
Sbjct: 264 VPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPIITPAYPCM 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS +TLR+M E+FQ ++CE IE W LFEPY FF S+KNYLQ+ I A +
Sbjct: 324 NSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWGALFEPYLFFESYKNYLQVDIVAVD 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
D R WKGWVESRLRQL MIERD G LQC YP ++ + S K S C +FMGL RKQ
Sbjct: 384 IDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTS-KQCSHCAFFMGLQRKQ 442
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGV---RP 480
G Q+G++FD+R TV+EF+ H + MY WK GM+I+VSH+R + IP +VFP G RP
Sbjct: 443 GEIIQEGQQFDIRGTVDEFR-HSINMYMFWKPGMEIYVSHVRRKQIPSYVFPEGYKRSRP 501
Query: 481 PKSLNEKK 488
+ +N+++
Sbjct: 502 QRPVNQQQ 509
>gi|218198073|gb|EEC80500.1| hypothetical protein OsI_22746 [Oryza sativa Indica Group]
Length = 748
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 287/481 (59%), Positives = 354/481 (73%), Gaps = 4/481 (0%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS S PT DV+ T+E+EK L D L+ S+EE++ R EVLG+LD IVK WIK+ T
Sbjct: 15 EPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIVKAWIKKATRAS 74
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G D+ +QEANAK+FTFGSYRLGV GP DID LCVGP +ATR + FF L+ ML + P
Sbjct: 75 GFGDQ-FVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVDMP 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVPDA VPV+KFK NGVS+DLLYA L VIPEDLD DS+LHN+DEQTV SL
Sbjct: 134 EVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVRSL 193
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD+IL LVPNI FR+TLR +RFWAKRRG+YSN +GFLGGINWALLVAR+CQLYP
Sbjct: 194 NGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVARICQLYP 253
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NA P++L+SRFFK+++ WKWPNPVMLC I+ ++ VWDPR N RDR H MPIITP+YP
Sbjct: 254 NASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYP 313
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
NSSYNVS +T +M +EF RA ++C+ I+ K W LFEPY FF S++NYL+I I A
Sbjct: 314 SMNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEITA 373
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
+N D R WKGWVESRLR L+ IER +L P DF ++S C YFMGL +
Sbjct: 374 RNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSS--RPLHCFYFMGLWK 431
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPP 481
KQ Q+ E++D+R V EFKS+ + Y W++GM+I VSH++ +DIP FVFPGG+RP
Sbjct: 432 KQISQAQEAEQYDIRAIVNEFKSN-IHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPS 490
Query: 482 K 482
+
Sbjct: 491 R 491
>gi|449480779|ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 758
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 297/569 (52%), Positives = 381/569 (66%), Gaps = 20/569 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P DV KELEK LVD L+ S+EES R EVL R+ IVKDW+K++T KG
Sbjct: 32 ISMAGPCDTDVQRNKELEKFLVDAGLYESKEESAKREEVLSRIGQIVKDWVKQLTRIKGY 91
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ +++ANA +FTFGSYRLGV GP DID LCVGP Y R +DFF L +L+E V
Sbjct: 92 TDQ-MVEDANAAIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFYMLHNILEEMEEV 150
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF+G+S+DLLYA + V+PEDLD S+L+N+DE TV SLNG
Sbjct: 151 SELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPEDLDISDVSVLYNVDEPTVRSLNG 210
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN+ +FR+ LRCL+FWAKRRG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 211 CRVADQILKLVPNVESFRTALRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 270
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++L+SRFF+++ W+WPNPVMLC I+ + VWDPR N RDR H MPIITP+YPC
Sbjct: 271 VPSMLLSRFFRVYTLWRWPNPVMLCAIEEDDLGCSVWDPRKNPRDRTHHMPIITPAYPCM 330
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS++TLR+M E+FQ ++CEEIE K W +LFEPY FF S+KNYLQ+ I A +
Sbjct: 331 NSSYNVSTSTLRVMMEQFQFGNKVCEEIELNKAQWSSLFEPYLFFESYKNYLQVDIVAAD 390
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
A D R WKGWVESR R L +IER G LQC YP ++ + S K + C +FMGL RKQ
Sbjct: 391 ADDLRSWKGWVESRFRHLTLLIERKTEGKLQCHPYPHEYVDTS-KPCAHCAFFMGLQRKQ 449
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKS 483
G Q+G++FD+R +V+EFK H Y WK GM+I VSH+R + IP FVFP G
Sbjct: 450 GEIIQEGQQFDIRSSVDEFK-HYTSSYMFWKPGMEIFVSHVRRRQIPPFVFPEG------ 502
Query: 484 LNEKKRKRIEVIESTKLKKSESSTAGHSSG---QKSSQTESGVALDGSHGLKS-----GP 535
KR R + + + ++ SG + + ++G H P
Sbjct: 503 ---HKRFRASRLSALQRSPNQEDVQNGRSGSCERDLKRKNDPARIEGEHNSPQKRQSISP 559
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSIETE 564
+ S SS S+ S ++ +RP IE +
Sbjct: 560 RRQDSVSSNISNFSNTASSERPEADIEAK 588
>gi|222635475|gb|EEE65607.1| hypothetical protein OsJ_21148 [Oryza sativa Japonica Group]
Length = 748
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 287/481 (59%), Positives = 354/481 (73%), Gaps = 4/481 (0%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS S PT DV+ T+E+EK L D L+ S+EE++ R EVLG+LD IVK WIK+ T
Sbjct: 15 EPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIVKAWIKKATRAS 74
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G D+ +QEANAK+FTFGSYRLGV GP DID LCVGP +ATR + FF L+ ML + P
Sbjct: 75 GFGDQ-FVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVDMP 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVPDA VPV+KFK NGVS+DLLYA L VIPEDLD DS+LHN+DEQTV SL
Sbjct: 134 EVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVRSL 193
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD+IL LVPNI FR+TLR +RFWAKRRG+YSN +GFLGGINWALLVAR+CQLYP
Sbjct: 194 NGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVARICQLYP 253
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NA P++L+SRFFK+++ WKWPNPVMLC I+ ++ VWDPR N RDR H MPIITP+YP
Sbjct: 254 NASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYP 313
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
NSSYNVS +T +M +EF RA ++C+ I+ K W LFEPY FF S++NYL+I I A
Sbjct: 314 SMNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEITA 373
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
+N D R WKGWVESRLR L+ IER +L P DF ++S C YFMGL +
Sbjct: 374 RNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSS--RPLHCFYFMGLWK 431
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPP 481
KQ Q+ E++D+R V EFKS+ + Y W++GM+I VSH++ +DIP FVFPGG+RP
Sbjct: 432 KQISQAQEAEQYDIRAIVNEFKSN-IHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPS 490
Query: 482 K 482
+
Sbjct: 491 R 491
>gi|297605720|ref|NP_001057507.2| Os06g0319600 [Oryza sativa Japonica Group]
gi|255676996|dbj|BAF19421.2| Os06g0319600, partial [Oryza sativa Japonica Group]
Length = 769
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 287/481 (59%), Positives = 354/481 (73%), Gaps = 4/481 (0%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS S PT DV+ T+E+EK L D L+ S+EE++ R EVLG+LD IVK WIK+ T
Sbjct: 36 EPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIVKAWIKKATRAS 95
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G D+ +QEANAK+FTFGSYRLGV GP DID LCVGP +ATR + FF L+ ML + P
Sbjct: 96 GFGDQ-FVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVDMP 154
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVPDA VPV+KFK NGVS+DLLYA L VIPEDLD DS+LHN+DEQTV SL
Sbjct: 155 EVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVRSL 214
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD+IL LVPNI FR+TLR +RFWAKRRG+YSN +GFLGGINWALLVAR+CQLYP
Sbjct: 215 NGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVARICQLYP 274
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NA P++L+SRFFK+++ WKWPNPVMLC I+ ++ VWDPR N RDR H MPIITP+YP
Sbjct: 275 NASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYP 334
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
NSSYNVS +T +M +EF RA ++C+ I+ K W LFEPY FF S++NYL+I I A
Sbjct: 335 SMNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEITA 394
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
+N D R WKGWVESRLR L+ IER +L P DF ++S C YFMGL +
Sbjct: 395 RNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSS--RPLHCFYFMGLWK 452
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPP 481
KQ Q+ E++D+R V EFKS+ + Y W++GM+I VSH++ +DIP FVFPGG+RP
Sbjct: 453 KQISQAQEAEQYDIRAIVNEFKSN-IHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPS 511
Query: 482 K 482
+
Sbjct: 512 R 512
>gi|357124126|ref|XP_003563757.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 700
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 301/603 (49%), Positives = 401/603 (66%), Gaps = 18/603 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + P D+ T EL K LV+ L+ S ES R EVLG LD IVKDW+K++T +G
Sbjct: 8 LSLAGPVDADIQRTAELNKFLVEAGLYESAHESARREEVLGELDKIVKDWVKQLTSQRGY 67
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ +++ANA LFTFGSYRLGV GP D+D LCVGP Y R +DFF L +L +T V
Sbjct: 68 TDQ-MVEDANAVLFTFGSYRLGVHGPGADVDTLCVGPSYVNREEDFFIVLHDILAQTEEV 126
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF+G+S+DLLYA + V+P DLD Q+S+L+++DE TV SLNG
Sbjct: 127 TELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPSDLDISQESVLYDIDEATVRSLNG 186
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPNI NFR+TLRCL+ WAKRRG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 187 CRVADQILRLVPNIENFRTTLRCLKHWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 246
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF++F W+WPNPVMLC I+ + + VWDPR N RDR H MPIITP+YPC
Sbjct: 247 VPSMLVSRFFRVFTQWRWPNPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPIITPAYPCM 306
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS++TLR+M E+FQ ++C+EIE K W LFE + FF ++KNYLQ+ I A++
Sbjct: 307 NSSYNVSTSTLRVMIEQFQFGNKICQEIELNKANWPALFESFQFFEAYKNYLQVDIIAED 366
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
D R WKGWVESRLRQL IERD G LQC YP ++++ S + + C +FMGL R
Sbjct: 367 DEDLRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPS-RQCAHCAFFMGLSRNV 425
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKS 483
GV ++G++FD+R TV+EF+ H + MY WK GM++ VSH+R ++IP +VFP G R P+
Sbjct: 426 GVKIEEGQQFDIRGTVDEFR-HDINMYMFWKPGMELAVSHVRRKEIPAYVFPEGYRRPRP 484
Query: 484 LNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDG----SHGLKSGPSVEP 539
++ +S K + G GQ + +S D S S SV P
Sbjct: 485 QRHVSHQQ----QSDKNDTENGNMTGSPDGQLKRKHDSAGTDDTEPCRSVKRASRASVSP 540
Query: 540 STSSVSSSTSASSRPQRPAVSIETEDDNATSVSQ----AQNFNQV---GATVAAALATGT 592
+ SS +S + + + + NA+ SQ + N Q G++ A+ +T +
Sbjct: 541 VHPTTSSPSSGNISDEATCNNQKKMSSNASGGSQNSHGSGNLEQANCSGSSPASEKSTDS 600
Query: 593 ISS 595
I+S
Sbjct: 601 IAS 603
>gi|449461393|ref|XP_004148426.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 863
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 280/487 (57%), Positives = 361/487 (74%), Gaps = 4/487 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ ELEK LVD +L+ S+EE+ R EVLGR+D IVK W+K++T+ +G
Sbjct: 26 ISLAGPMDADIHRNIELEKFLVDSELYESKEEAAKREEVLGRIDQIVKSWVKQLTLLRGY 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ E+ +++ANA +FTFGSYRLGV GP +DID LCVGP Y R +DFF L +L E V
Sbjct: 86 T-EQMVEDANAVIFTFGSYRLGVHGPGSDIDTLCVGPSYVNR-EDFFIILHNILAEMEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
DL PVPDA VPV++FKF G+S+DLLYA + V+PEDLD S+L+N+DEQTV SLNG
Sbjct: 144 TDLQPVPDAHVPVMRFKFLGISIDLLYASISLLVVPEDLDISHGSVLYNVDEQTVRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN+ +FR+TLRCL+FWAKRRG+YSN GFLGG+NWALLVA+VCQLYPNA
Sbjct: 204 CRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAQVCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WPNPVMLC I+ + VWDPR N RDR HLMPIITP+YPC
Sbjct: 264 IPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHLMPIITPAYPCM 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS++TLR+M E+F+ +CEEI+ K W LFEPY FF ++KNYLQ+ I A +
Sbjct: 324 NSSYNVSTSTLRVMMEQFRYGNSICEEIDLSKAQWSALFEPYLFFETYKNYLQVDIIAAD 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
A D WKGWVESR RQL IERD G+LQC YP ++S+ S K S C +FMGL RK+
Sbjct: 384 ADDLLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTS-KPCSHCAFFMGLQRKE 442
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKS 483
G+ Q G++FD+R TV+EF+ + MY+ WK GM I+VSH+R + +P FVFP G + K
Sbjct: 443 GLRGQGGQQFDIRGTVDEFRQEIN-MYAFWKPGMDIYVSHVRRKQLPTFVFPDGHKRAKP 501
Query: 484 LNEKKRK 490
L + ++
Sbjct: 502 LRHEGQQ 508
>gi|58220769|gb|AAW68016.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 748
Score = 596 bits (1537), Expect = e-167, Method: Compositional matrix adjust.
Identities = 286/481 (59%), Positives = 353/481 (73%), Gaps = 4/481 (0%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS S PT DV+ T+E+EK L D L+ S+EE++ R EVLG+LD IVK WIK+ T
Sbjct: 15 EPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIVKAWIKKATRAS 74
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G D+ +QEANAK+FTFGSYRLGV GP DID LCVGP +ATR + FF L+ ML + P
Sbjct: 75 GFGDQ-FVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVDMP 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVPDA VPV+KFK NGVS+DLLYA L VIPEDLD DS+LHN+DEQTV SL
Sbjct: 134 EVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVRSL 193
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD+IL LVPNI FR+TLR LRFWAKRRG+YSN +GFLGGINWALLVAR+CQLYP
Sbjct: 194 NGCRVTDKILRLVPNILTFRTTLRSLRFWAKRRGVYSNVIGFLGGINWALLVARICQLYP 253
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NA P++L+SRFFK+++ WKWPNPVMLC I+ ++ VWDPR N RDR H MPIITP+YP
Sbjct: 254 NASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYP 313
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
NSSYNVS +T +M +EF RA ++C+ I+ + W LFEPY FF S++NYL+I I A
Sbjct: 314 SMNSSYNVSISTRHVMVQEFTRASDICQAIDEREADWDALFEPYPFFESYRNYLKIEITA 373
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
+N D R WKGWVESRLR L+ IER +L P DF ++S C YFMGL +
Sbjct: 374 RNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSS--RPLHCFYFMGLWK 431
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPP 481
KQ Q+ E++D+R V EFKS+ + Y W++GM+I VSH++ +DIP FVFPG +RP
Sbjct: 432 KQISQAQEAEQYDIRAIVNEFKSN-IHAYQHWREGMEIEVSHVKRKDIPSFVFPGRIRPS 490
Query: 482 K 482
+
Sbjct: 491 R 491
>gi|326505742|dbj|BAJ95542.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 694
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 275/479 (57%), Positives = 357/479 (74%), Gaps = 3/479 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P DV T EL K LV+ L+ S +ES R EVLG LD IVK W+K++T +G
Sbjct: 8 ISLAGPLDADVQRTAELNKFLVEAGLYESADESARREEVLGELDKIVKVWVKQLTSQRGY 67
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ ++EANA LFTFGSYRLGV GP DID LCVGP Y R +DFF L +L +T V
Sbjct: 68 TDQ-MVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEEV 126
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
L PVPDA VPV+KFKF+G+S+DLLYA + V+P DLD Q+++L+++DE TV SL G
Sbjct: 127 SQLQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPSDLDISQEAVLYDIDEATVRSLTG 186
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPNI +FR+TLRCL+ WA+RRG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 187 CRVADQILRLVPNIESFRTTLRCLKHWARRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 246
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF++F W+WP PVMLC I+ + + VWDPR N RDR H MPIITP+YPC
Sbjct: 247 VPSMLVSRFFRVFTQWRWPTPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPIITPAYPCM 306
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS++TLR+M E+FQ ++C+EIE K +W LFEP++FF ++KNYLQ+ I A++
Sbjct: 307 NSSYNVSTSTLRVMIEQFQFGNKICQEIEMNKASWSALFEPFNFFEAYKNYLQVDIIAED 366
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
D R WKGWVESRLRQL IERD G LQC YP ++++ S + + C +FMGL RK+
Sbjct: 367 DEDLRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPS-RQCAHCAFFMGLSRKE 425
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPK 482
GV Q+G++FD+R TV+EF+ H + MY WK GM++ VSH+R ++IP +VFP G + P+
Sbjct: 426 GVKIQEGQQFDIRGTVDEFR-HEINMYMFWKPGMELAVSHVRRKEIPAYVFPEGYKRPR 483
>gi|242038623|ref|XP_002466706.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
gi|241920560|gb|EER93704.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
Length = 750
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/482 (59%), Positives = 353/482 (73%), Gaps = 4/482 (0%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS S PT D++ T E+EK L D L+ S++E++ R EVLG+LD VK WIK+ T
Sbjct: 15 EPISLSGPTDKDLMQTTEVEKYLSDAGLYESQDEAVLREEVLGKLDQTVKAWIKKATRIS 74
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G E+ + EANAK+FTFGSYRLGV GP DID LCVGP +ATR++ FF L ML E P
Sbjct: 75 GYG-EQFVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNEYFFRWLHDMLAEMP 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVPDA VPV+ FK NGVS+DLLYA L +VIPEDLD QDS+L+N+DEQTV SL
Sbjct: 134 EVSELHPVPDAHVPVLGFKINGVSIDLLYANLAHAVIPEDLDLSQDSILNNVDEQTVRSL 193
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD+IL LVPNI +FR+TLR +R+W KRRG+YSN MGFLGGINWA+LV R+CQLYP
Sbjct: 194 NGCRVTDQILRLVPNILSFRTTLRFIRYWGKRRGVYSNVMGFLGGINWAILVGRICQLYP 253
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NA P++L+SRFF++++ WKWPNPVMLC I+ + VWDPR N RDR H MPIITP+YP
Sbjct: 254 NASPSMLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYRDRGHQMPIITPAYP 313
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
C NSSYNVS +T +M +EF RA E+C+ I+ GK W LFEPY FF S+KNYL+++I A
Sbjct: 314 CMNSSYNVSVSTRYVMTQEFTRAFEICQAIDEGKADWDALFEPYPFFESYKNYLEVNITA 373
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
+N + R WKGWVESRLR L+ IER ++ YP DFS+ S C YFMGL R
Sbjct: 374 RNEDELRSWKGWVESRLRTLVLKIERYSHEMILAHPYPKDFSDKS--RPLHCFYFMGLWR 431
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPP 481
KQ Q+ E+FD+R V EFK + + Y WK+GM I VSH++ ++IP FVFPGGVRP
Sbjct: 432 KQTTQTQEAEQFDIRGIVNEFK-NTICAYQQWKEGMDIEVSHVKRKEIPLFVFPGGVRPS 490
Query: 482 KS 483
+S
Sbjct: 491 RS 492
>gi|449515462|ref|XP_004164768.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 544
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 280/487 (57%), Positives = 360/487 (73%), Gaps = 4/487 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ ELEK LVD +L+ S+EE+ R EVLGR+D IVK W+K++T+ +G
Sbjct: 26 ISLAGPMDADIHRNIELEKFLVDSELYESKEEAAKREEVLGRIDQIVKSWVKQLTLLRGY 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ E+ +++ANA FTFGSYRLGV GP +DID LCVGP Y R +DFF L +L E V
Sbjct: 86 T-EQMVEDANAVXFTFGSYRLGVHGPGSDIDTLCVGPSYVNR-EDFFIILHNILAEMEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
DL PVPDA VPV++FKF G+S+DLLYA + V+PEDLD S+L+N+DEQTV SLNG
Sbjct: 144 TDLQPVPDAHVPVMRFKFLGISIDLLYASISLLVVPEDLDISHGSVLYNVDEQTVRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN+ +FR+TLRCL+FWAKRRG+YSN GFLGG+NWALLVA+VCQLYPNA
Sbjct: 204 CRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAQVCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WPNPVMLC I+ + VWDPR N RDR HLMPIITP+YPC
Sbjct: 264 IPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHLMPIITPAYPCM 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS++TLR+M E+F+ +CEEI+ K W LFEPY FF ++KNYLQ+ I A +
Sbjct: 324 NSSYNVSTSTLRVMMEQFRYGNSICEEIDLSKAQWSALFEPYLFFETYKNYLQVDIIAAD 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
A D WKGWVESR RQL IERD G+LQC YP ++S+ S K S C +FMGL RK+
Sbjct: 384 ADDLLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTS-KPCSHCAFFMGLQRKE 442
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKS 483
G+ Q G++FD+R TV+EF+ + MY+ WK GM I+VSH+R + +P FVFP G + K
Sbjct: 443 GLRGQGGQQFDIRGTVDEFRQEIN-MYAFWKPGMDIYVSHVRRKQLPTFVFPDGHKRAKP 501
Query: 484 LNEKKRK 490
L + ++
Sbjct: 502 LRHEGQQ 508
>gi|357138719|ref|XP_003570937.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 760
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 288/482 (59%), Positives = 350/482 (72%), Gaps = 4/482 (0%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS S PT DV+ T E+EK L D L+ S+EE++ R EVLG+LD VK WIK+ T
Sbjct: 34 EPISLSGPTEKDVMQTTEVEKFLADAGLYESQEEAVSREEVLGKLDQTVKTWIKKATRAS 93
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G E+ +QEANAK+FTFGSYRLGV GP DID LCVGP +ATR+D FF L ML E P
Sbjct: 94 GYG-EQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNDYFFRCLHDMLAEMP 152
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVPDA VPV+ FK GVS+DLLYA L VIPEDLD QDS+LHN+DEQ V SL
Sbjct: 153 EVSELHPVPDAHVPVLGFKLCGVSIDLLYANLAHVVIPEDLDLSQDSILHNVDEQAVRSL 212
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD+IL LVPNI +FR+TLR +R+W KRRG+YSN MGFLGGINWA+LVAR+CQLYP
Sbjct: 213 NGCRVTDQILRLVPNIPSFRTTLRFMRYWGKRRGVYSNVMGFLGGINWAILVARICQLYP 272
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NA P++L+SRFF++++ WKWPNPV LC I+ + VWDPR N RDR H MPIITP+YP
Sbjct: 273 NASPSMLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFRDRGHQMPIITPAYP 332
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
C NSSYNVS +T +M +EF R E+C+ I+ + TW LFEPY FF ++NYL++ I+A
Sbjct: 333 CMNSSYNVSVSTRYVMVQEFTRGYEICQAIDENRATWDDLFEPYPFFELYRNYLEVVISA 392
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
+N D R WKGWVESRLR L+ ER +L +P DFS+ S S YFMGL R
Sbjct: 393 RNEDDLRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDFSDGSRPLHS--FYFMGLWR 450
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPP 481
KQ V PQ+ E+FD+R V EFKS V Y+ +GM I VSH++ +DIP FVFPGGVRPP
Sbjct: 451 KQTVQPQEAEQFDIRGIVNEFKSSVC-AYAHRGEGMDIEVSHVKRKDIPLFVFPGGVRPP 509
Query: 482 KS 483
+S
Sbjct: 510 RS 511
>gi|326517509|dbj|BAK03673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 305/563 (54%), Positives = 381/563 (67%), Gaps = 9/563 (1%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS S PT DV+ T E+EK L D L+ S+EE++ R EVLG+LD VK WIK+ T
Sbjct: 13 EPISLSGPTEKDVVQTAEVEKFLADAGLYESQEEAVSREEVLGKLDQTVKTWIKKATRVS 72
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G D+ + EANAK+FTFGSYRLGV GP DID LCVGP +ATR+D FF L ML E P
Sbjct: 73 GYGDQ-FVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNDYFFRCLHDMLAEMP 131
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVPDA VPV+ FK GVS+DLLYA L VIP+DLD QDS+LHN+DEQ V SL
Sbjct: 132 EVSELHPVPDAHVPVLGFKLCGVSIDLLYANLAHVVIPDDLDLSQDSILHNVDEQAVRSL 191
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD+IL LVPNI +FR+TLR +R+W KRRG+YSN MGFLGGINWA+LVAR+CQLYP
Sbjct: 192 NGCRVTDQILRLVPNIPSFRTTLRFMRYWGKRRGVYSNVMGFLGGINWAILVARICQLYP 251
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NA P++L+SRFF++++ WKWPNPV LC I+ + VWDPR N RDR H MPIITP+YP
Sbjct: 252 NASPSMLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFRDRGHQMPIITPAYP 311
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
C NSSYNVS++T +M +EF R E+C+ I+ + TW LFEPY FF +KNYL++ I A
Sbjct: 312 CMNSSYNVSTSTRYVMIQEFTRGYEICQAIDENRATWDDLFEPYPFFELYKNYLEVGITA 371
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
++ D R WKGWVESRLR L+ ER +L +P DFS+ S S YFMGL R
Sbjct: 372 RSEDDLRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDFSDGSRPLHS--FYFMGLWR 429
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPP 481
KQ PQ+ E+FD+R V EFKS V+ Y+ ++GM I VSH++ +DIP FVFPGGVRPP
Sbjct: 430 KQTAQPQEAEQFDIRGIVNEFKSAVL-AYAHRREGMDIEVSHVKRKDIPLFVFPGGVRPP 488
Query: 482 KSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSVEPST 541
+S R V + + G+ G + S ++ ALD S G +S V PS
Sbjct: 489 RSSRTAARSSRTVSRNVVTADGQ---VGNPLGAE-SWSDPQSALDHSGGYQSTLLV-PSV 543
Query: 542 SSVSSSTSASSRPQRPAVSIETE 564
SS + + + A S+E E
Sbjct: 544 SSKETPSILNGHSNLHAESVEHE 566
>gi|255550972|ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus communis]
gi|223544354|gb|EEF45875.1| Poly(A) polymerase beta, putative [Ricinus communis]
Length = 754
Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust.
Identities = 280/476 (58%), Positives = 352/476 (73%), Gaps = 3/476 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P+ D++ +L K LVD L+ S+EE+L R EVL R+D IVKDWIK++T +G
Sbjct: 33 ISLAGPSEADLLRNADLVKFLVDSGLYESKEENLKREEVLCRIDQIVKDWIKQLTRQRGY 92
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD+ + EANA +FTFGSYRLGV GP DID LCVGP Y R +DFF L +L E +
Sbjct: 93 SDQ-MVDEANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFILLHDILAEMDEI 151
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF G+S+DLLYA + V+PEDLD S+L+++DEQTV SLNG
Sbjct: 152 TELQPVPDAHVPVMKFKFQGISIDLLYASISLPVVPEDLDISHGSVLYDVDEQTVRSLNG 211
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN+ +FR+TLRCL+FWAKRRG+YSN GFLGG+NWALLVAR+CQLYPNA
Sbjct: 212 CRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARLCQLYPNA 271
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WPNPVMLC I+ + VWDPR N RDR H MPIITP+YPC
Sbjct: 272 IPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRRNPRDRFHHMPIITPAYPCM 331
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS +TLR+M E+FQ ++CEEIE K W LFEPY FF ++KNYLQI I A +
Sbjct: 332 NSSYNVSISTLRVMMEQFQYGNKICEEIELNKAQWSALFEPYLFFEAYKNYLQIDIIAAD 391
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
A D WKGWVESRLRQL IERD G+LQC YP ++ + S K C +FMGL R++
Sbjct: 392 ADDLLAWKGWVESRLRQLTLKIERDTIGMLQCHPYPNEYIDTS-KQCPHCAFFMGLQRRK 450
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVR 479
GVS Q+G++FD+R TVEEF+ + MY WK GM ++VSH R + +P FVFP G +
Sbjct: 451 GVSGQEGQQFDIRGTVEEFRQEIN-MYMFWKPGMDVYVSHARRRQLPAFVFPDGYK 505
>gi|147790301|emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]
Length = 778
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/488 (57%), Positives = 357/488 (73%), Gaps = 15/488 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT +D+ + ELEK S+EE++ R EVL RL IVKDW+K++T +G
Sbjct: 25 ISVAGPTEVDIQRSLELEK---------SKEEAIKRAEVLDRLGQIVKDWVKQLTRLRGY 75
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ +++ANA LFTFGSYRLGV GP TDID LC+GP Y +R +DFF L +L + V
Sbjct: 76 TDQ-MVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGPSYVSREEDFFFILHNILADMEEV 134
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF+G+S+DLLYA + V+PEDLD S+L+N+DE TV SLNG
Sbjct: 135 TELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPEDLDISDLSVLYNIDEPTVRSLNG 194
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN+ +F +TLRCL+FWAKRRG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 195 CRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 254
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WPNPVMLC I+ + VWDPR N RDR H MPIITP+YPC
Sbjct: 255 VPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPIITPAYPCM 314
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS +TLR+M E+FQ ++CE IE W LFEPY FF S+KNYLQ+ I A +
Sbjct: 315 NSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWGALFEPYLFFESYKNYLQVDIVAVD 374
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
D R WKGWVESRLRQL MIERD G LQC YP ++ + S K S C +FMGL RKQ
Sbjct: 375 IDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTS-KQCSHCAFFMGLQRKQ 433
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGV---RP 480
G Q+G++FD+R TV+EF+ H + MY WK GM+I+VSH+R + IP +VFP G RP
Sbjct: 434 GEIIQEGQQFDIRGTVDEFR-HSINMYMFWKPGMEIYVSHVRRKQIPSYVFPEGYKRSRP 492
Query: 481 PKSLNEKK 488
+ +N+++
Sbjct: 493 QRPVNQQQ 500
>gi|356507941|ref|XP_003522721.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 651
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 270/490 (55%), Positives = 355/490 (72%), Gaps = 6/490 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + PT D+ EL+K L+D L+ S EES R EVL RLD IVK+W+K++T +G
Sbjct: 29 LSLAGPTDADLQRNNELDKFLLDSGLYESNEESAARKEVLHRLDQIVKNWVKQLTRQRGY 88
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ +++ANA +FTFGSYRLGV GP DID LC+GP Y R +DFF L +L E V
Sbjct: 89 TDQ-MVEDANAVIFTFGSYRLGVHGPGVDIDTLCIGPSYVNREEDFFVILHNILAEMEEV 147
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF G+S+DLLYA + V+PEDLD S+L+++DE TV SLNG
Sbjct: 148 SELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISHGSVLYDVDEPTVRSLNG 207
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN+ +FR+ LRCL+FWAKRRG+YSN GFLGG+NWA+LVAR+CQLYPNA
Sbjct: 208 CRVADQILKLVPNVEHFRTALRCLKFWAKRRGVYSNVTGFLGGVNWAILVARICQLYPNA 267
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WPNPVMLC I+ + +WDPR N RDR H MPIITP+YPC
Sbjct: 268 IPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHTMPIITPAYPCM 327
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS++TLR+M E+F+ ++C+EIE K W LF+PY FF ++KNYLQ+ I A +
Sbjct: 328 NSSYNVSASTLRVMMEQFRYGNKICDEIELNKAQWSALFQPYIFFEAYKNYLQVDIIASD 387
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
A D W+GWVESRLR L IERD G+LQC YP ++ + S K + +FMGL RK+
Sbjct: 388 ADDLLAWRGWVESRLRLLTLKIERDTNGMLQCHPYPNEYVDTS-KLCAHSAFFMGLQRKE 446
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGG---VRP 480
GV Q+G++FD+R TV+EF+ + MY WK GM I VSH+R + +P FVFPGG R
Sbjct: 447 GVRGQEGQQFDIRGTVDEFRQEIN-MYMYWKPGMDIFVSHVRRKQLPAFVFPGGYKRTRM 505
Query: 481 PKSLNEKKRK 490
P+ ++ + K
Sbjct: 506 PRHISHQAEK 515
>gi|242061050|ref|XP_002451814.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
gi|241931645|gb|EES04790.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
Length = 672
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 296/607 (48%), Positives = 398/607 (65%), Gaps = 32/607 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + PT+ D+ T ELEK LV+ L+ +EES R +VL + IVK+W+K++T KG
Sbjct: 26 LSLAGPTLADLQRTAELEKFLVEAGLYEGKEESAKREDVLCEIGQIVKEWVKQLTSKKGY 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ +++ANA LFTFGSYRLGV GP DID LCVGP Y R +DFF L +L E V
Sbjct: 86 ADQ-LVEQANAVLFTFGSYRLGVHGPEADIDTLCVGPSYVNREEDFFVTLHGILAEKEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF G+S+DLLYA L SVIP D D Q S+L ++DE TV SLNG
Sbjct: 145 TELQPVPDAHVPVLKFKFRGISIDLLYASLSLSVIPADFDISQGSVLCDVDEATVRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN+ NFR+TLRCL++WAKRRG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 205 CRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALLVARVCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF++F W+WPNPVMLC I+ + +WDPR N RDR HLMPIITP+YPC
Sbjct: 265 VPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPIITPAYPCM 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVSS+TLR++ E+FQ ++C+EIE K W LFEP+HFF +++ +L + I A+N
Sbjct: 325 NSSYNVSSSTLRVIMEQFQFGNKICQEIELNKANWNALFEPFHFFEAYRKFLVVDIVAEN 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
D R WKGW+ESRLRQL I+RD G+LQC YP ++S+ +++ + C ++MGL RK+
Sbjct: 385 DDDLRLWKGWIESRLRQLTLKIDRDTKGILQCHPYPCEYSDPTIE-CAHCAFYMGLSRKE 443
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPP-- 481
G S + G++FD+R TV+EF + MYS W GM + V+H++ + +P +VF G + P
Sbjct: 444 G-SKKRGQQFDIRGTVDEFMRE-IGMYSLWMPGMDLAVTHVQREQVPSYVFEQGYKKPCP 501
Query: 482 -KSLNEKKRKRIEVIESTKL-----KKSESSTAGHSSGQKS----SQTESGVALDGSHGL 531
N++++ +V S L +K +S GH KS S + GV
Sbjct: 502 TMHANQQEQSDGDVTLSPYLDSQLKRKYDSDGDGHVELHKSVKWASVSPPGVGTPPHGNS 561
Query: 532 KSGPSVEPSTSSVSS--STSASSRPQRPAVSIE----------TEDDNATSVSQAQNFNQ 579
S + VSS + A + P +++E +ED +A+ S F
Sbjct: 562 VSNVVCDSPVKFVSSVVCSRAQTSPSHDDINLEQAQLTTSPYGSEDTSASGTS----FAA 617
Query: 580 VGATVAA 586
VGA V A
Sbjct: 618 VGAVVLA 624
>gi|414872023|tpg|DAA50580.1| TPA: hypothetical protein ZEAMMB73_982818 [Zea mays]
Length = 745
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 283/484 (58%), Positives = 351/484 (72%), Gaps = 8/484 (1%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS S PT D++ T E+EK L D L+ ++E++ R EVLG+LD VK WIK+ T
Sbjct: 15 EPISLSGPTEKDLMQTAEVEKYLSDAGLYERQDEAILREEVLGKLDQTVKAWIKKATRIS 74
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G E+ + EANAK+FTFGSYRLGV GP DID LCVGP +ATR++ FF L +L E P
Sbjct: 75 GYG-EQFVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNEYFFRWLHDILAEMP 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVPDA VPV+ FK NGVS+DLLYA L +VIPEDLD QDS+LHN+DEQTV SL
Sbjct: 134 EVSELHPVPDAHVPVLGFKINGVSIDLLYANLAHAVIPEDLDLSQDSILHNVDEQTVRSL 193
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD+IL LVPNI +FR+TLR +R W KRRG+YSN MGFLGGINWA+LV R+CQLYP
Sbjct: 194 NGCRVTDQILRLVPNILSFRTTLRFIRCWGKRRGVYSNVMGFLGGINWAILVGRICQLYP 253
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQ--YQAMPHHVWDPRSNQRDRKHLMPIITPS 299
NA P++L+SRFF++++ WKWPNPVMLC I+ Y +P VWDPR N RDR H MPIITP+
Sbjct: 254 NASPSMLISRFFRVYSKWKWPNPVMLCHIEEGYLGLP--VWDPRRNYRDRGHQMPIITPA 311
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
YPC NSSYNVS +T +M +EF +A E+C+ I+ GK W LFEPY FF S+KNYL+++I
Sbjct: 312 YPCMNSSYNVSVSTRYVMVQEFTQAFEICQAIDEGKADWDALFEPYPFFESYKNYLEVNI 371
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGL 419
A+N D R WKGWVESRLR L+ IER ++ YP DFS+ S YFMGL
Sbjct: 372 TARNEDDLRNWKGWVESRLRTLVLKIERYSHEMILAHPYPKDFSDKS--RPLHIFYFMGL 429
Query: 420 GRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVR 479
RKQ Q+ E+FD+R V EFK+ + Y K+GM I VSH++ ++IP FVFPGGVR
Sbjct: 430 WRKQTTQAQETEQFDIRGIVNEFKN-TICAYQHRKEGMDIEVSHVKRKEIPLFVFPGGVR 488
Query: 480 PPKS 483
P ++
Sbjct: 489 PSRT 492
>gi|356515639|ref|XP_003526506.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 732
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 264/476 (55%), Positives = 346/476 (72%), Gaps = 3/476 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + PT D+ +L+K L+D L+ S EES R EVL RLD IVK W+K++T +G
Sbjct: 30 LSLAGPTDADLQRNNDLDKFLLDSGLYESNEESAARKEVLHRLDQIVKSWVKQLTRQRGY 89
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ +++ANA +FTFGSYRLGV GP DID LC+GP Y R +DFF L +L E V
Sbjct: 90 TDQ-MVEDANAVIFTFGSYRLGVHGPGVDIDTLCIGPSYVNREEDFFIILHNILAEMEEV 148
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF G+S+DLLYA + V+PEDLD S+L+++DE TV SLNG
Sbjct: 149 SELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISHGSVLYDVDEPTVRSLNG 208
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN+ +FR+TLRCL+FWAKRRG+YSN GFLGG+NWA+LVAR+CQLYPNA
Sbjct: 209 CRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWAILVARICQLYPNA 268
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WPNPVMLC I+ + +WDPR N RDR H MPIITP+YPC
Sbjct: 269 IPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHTMPIITPAYPCM 328
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS++TLR+M ++F ++C+EIE K W LF+PY FF ++KNYLQ+ I A +
Sbjct: 329 NSSYNVSASTLRVMVDQFCYGNKICDEIELNKAQWSALFQPYIFFEAYKNYLQVDIIASD 388
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
D W+GWVESRLR L IERD G+LQC YP ++ + S K + +FMGL RK+
Sbjct: 389 TDDLLAWRGWVESRLRMLTLKIERDTNGMLQCHPYPHEYVDTS-KPCAHSAFFMGLQRKE 447
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVR 479
GV Q+G++FD+R TV+EF+ + MY WK GM I VSH+R + +P FVFP G +
Sbjct: 448 GVRGQEGQQFDIRGTVDEFRQEIN-MYMYWKPGMDIFVSHVRRKQLPAFVFPDGYK 502
>gi|413926072|gb|AFW66004.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 680
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 264/478 (55%), Positives = 351/478 (73%), Gaps = 4/478 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + PT+ D+ T ELEK LV+ L+ +EES R +VL + IVK+W+K++T KG
Sbjct: 26 LSLAGPTLADLQRTAELEKFLVEAGLYEGKEESAKREDVLSEIGLIVKEWVKQLTRKKGY 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ E+ +++ANA LFTFGSYRLGV GP DID LCVGP Y R +DFF L +L E V
Sbjct: 86 A-EQLVEQANAILFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFVTLHGILAEKEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF G+S+DLLYA + SVIP D D Q S+L ++DE TV SLNG
Sbjct: 145 AELQPVPDAHVPVLKFKFRGISIDLLYASISLSVIPADFDISQGSVLCDVDEATVRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN+ NFR+TLRCL++WAKRRG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 205 CRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALLVARVCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF++F W+WPNPVMLC I+ + +WDPR N RDR HLMPIITP+YPC
Sbjct: 265 VPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPIITPAYPCM 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS++TLR++ E+FQ ++C+EIE K W LFEP+HFF +++ +L + I A++
Sbjct: 325 NSSYNVSTSTLRVIMEQFQFGNKVCQEIELNKANWNALFEPFHFFEAYRKFLVVDIVAED 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
D R WKGW+ESRLRQL IERD G+LQC YP ++S+ +++ + C ++MGL RK+
Sbjct: 385 DDDLRLWKGWIESRLRQLTLKIERDTKGILQCHPYPCEYSDPTIE-CAHCAFYMGLSRKE 443
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPP 481
G+ + G++FD+R TV+EF + MYS WK GM + V+H+ + +P +VF G + P
Sbjct: 444 GLKKR-GQQFDIRGTVDEFMRE-IGMYSLWKPGMDLAVTHVHREQVPSYVFEQGYKKP 499
>gi|449448062|ref|XP_004141785.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 772
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 296/583 (50%), Positives = 379/583 (65%), Gaps = 34/583 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P DV KELEK LVD L+ S+EES R EVL R+ IVKDW+K++T KG
Sbjct: 32 ISMAGPCDTDVQRNKELEKFLVDAGLYESKEESAKREEVLSRIGQIVKDWVKQLTRIKGY 91
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ +++ANA +FTFGSYRLGV GP DID LCVGP Y R +DFF L +L+E V
Sbjct: 92 TDQ-MVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFYMLHNILEEMEEV 150
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF+G+S+DLLYA + V+PEDLD S+L+N+DE TV SLNG
Sbjct: 151 SELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPEDLDISDVSVLYNVDEPTVRSLNG 210
Query: 184 CRVTDRILSLVP----------NIRNFRS----TLRCLRFWAKRRGIYSNAMGFLGGINW 229
CRV D+IL LVP NI ++ LRCL+FWAKRRG+YSN GFLGG+NW
Sbjct: 211 CRVADQILKLVPFFFFVKFFHPNIPVWKLXSPFALRCLKFWAKRRGVYSNVTGFLGGVNW 270
Query: 230 ALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDR 289
ALLVARVCQLYPNA+P++L+SRFF+++ W+WPNPVMLC I+ + VWDPR N RDR
Sbjct: 271 ALLVARVCQLYPNAVPSMLLSRFFRVYTLWRWPNPVMLCAIEEDDLGCSVWDPRKNPRDR 330
Query: 290 KHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG 349
H MPIITP+YPC NSSYNVS++TLR+M E+FQ ++CEEIE K W +LFEPY FF
Sbjct: 331 THHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKVCEEIELNKAQWSSLFEPYLFFE 390
Query: 350 SFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKS 409
S+KNYLQ+ I A +A D R WKGWVESR R L +IER G LQC YP ++ + S K
Sbjct: 391 SYKNYLQVDIVAADADDLRSWKGWVESRFRHLTLLIERKTEGKLQCHPYPHEYVDTS-KP 449
Query: 410 SSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDI 469
+ C +FMGL RKQG Q+G++FD+R +V+EFK H Y WK GM+I VSH+R + I
Sbjct: 450 CAHCAFFMGLQRKQGEIIQEGQQFDIRSSVDEFK-HYTSSYMFWKPGMEIFVSHVRRRQI 508
Query: 470 PDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSG---QKSSQTESGVALD 526
P FVFP G KR R + + + ++ SG + + ++
Sbjct: 509 PPFVFPEG---------HKRFRASRLSALQRSPNQEDVQNGRSGSCERDLKRKNDPARIE 559
Query: 527 GSHGLKS-----GPSVEPSTSSVSSSTSASSRPQRPAVSIETE 564
G H P + S SS S+ S ++ +RP IE +
Sbjct: 560 GEHNSPQKRQSISPRRQDSVSSNISNFSNTASSERPEADIEAK 602
>gi|297825665|ref|XP_002880715.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326554|gb|EFH56974.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 788
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 281/552 (50%), Positives = 369/552 (66%), Gaps = 4/552 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + P DV ELEK LVDE L+ S+EE++ R EVL R+D IVK W+K++T +G
Sbjct: 30 LSIAGPCAADVKRNLELEKFLVDEGLYESKEETMRREEVLVRIDQIVKHWVKQLTRQRGY 89
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ + +ANA +FTFGSYRLGV GP DID LCVGP Y R +DFF L ML E V
Sbjct: 90 TDQ-MVDDANAVIFTFGSYRLGVHGPRADIDTLCVGPSYVNREEDFFIILRDMLAEMEEV 148
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PV DA VPV+KFKF G+S+DLLYA + VIP+DLD S+L ++DEQTV SLNG
Sbjct: 149 TELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVRSLNG 208
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN +FR+TLRCL++WAK+RG+YSN GFLGG+NWALLVAR+CQLYPNA
Sbjct: 209 CRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQLYPNA 268
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WPNPVMLC I+ + VWDPR N RDR HLMPIITP+YPC
Sbjct: 269 IPSMLVSRFFRVYIQWRWPNPVMLCTIEEDELSFPVWDPRKNHRDRYHLMPIITPAYPCM 328
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS +TLR+M E+FQ +C+EIE K+ W +LFE Y FF ++KNYLQ+ + A +
Sbjct: 329 NSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQQWSSLFEQYMFFEAYKNYLQVDVLALD 388
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
A D WKGWVESR RQL IERD G+L C P ++ + S K C +FMGL R +
Sbjct: 389 AEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTS-KKFRHCAFFMGLQRAE 447
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKS 483
G Q+ ++FD+R TV+EF+ V MY W+ GM ++VSH+R + +P FVFP G + P+
Sbjct: 448 GFGGQECQQFDIRGTVDEFRQEVN-MYMFWRPGMDVYVSHVRRRQLPSFVFPKGYKRPRQ 506
Query: 484 LNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSVEPSTSS 543
+ ++ E E S+ S G++ + ++T P + S
Sbjct: 507 SRHQNQQCREPGEGVVGSLSD-SVDGYAKRKNDNETMDTRPEKREKRASRSPHSLDAVSP 565
Query: 544 VSSSTSASSRPQ 555
VSS + PQ
Sbjct: 566 VSSGITTGETPQ 577
>gi|297802710|ref|XP_002869239.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
gi|297315075|gb|EFH45498.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
Length = 748
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 284/582 (48%), Positives = 382/582 (65%), Gaps = 14/582 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + P+ D+ ELEK LVDE L+ S+++++ R EVLGR+D IVK W+K++T +G
Sbjct: 26 LSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLTQQRGY 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ +++ANA +FTFGSYRLGV GP DID LCVGP Y R +DFF L +L E V
Sbjct: 86 TDQ-MVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF G+ +DLLYA + V+P+DLD S+L ++DE TV SLNG
Sbjct: 145 TELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCDVDEPTVRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN +FR+TLRCL++WAK+RG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 205 CRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WPNPVMLC I+ + VWDPR N RDR HLMPIITP+YPC
Sbjct: 265 IPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRKNHRDRYHLMPIITPAYPCM 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS +TLR+M E+FQ + +EIE K+ W +LFE Y FF ++KNYLQ+ I A +
Sbjct: 325 NSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAGD 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
A D WKGWVESR RQL IERD G+L C P ++ + + + C +FMGL R +
Sbjct: 385 AEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVD-TARQFLHCAFFMGLQRAE 443
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKS 483
GV Q+ ++FD+R TV+EF+ V MY WK GM + VSH+R + +P FVFP G R P+
Sbjct: 444 GVGGQECQQFDIRGTVDEFRQEVN-MYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQ 502
Query: 484 LNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPS----VEP 539
+ + + E + S S H+ + S+ P V P
Sbjct: 503 SRHQNQPGGKSGEDGTVSHSGSVVERHAKRKNDSEMMDARPEKPEKRASLSPQSLDIVSP 562
Query: 540 STSSVSSSTSAS----SRPQRPAVSIETEDDNATSVSQAQNF 577
+S++++ + RP P+ IE E+ N T ++ NF
Sbjct: 563 ESSAITTGWTPPVCNLRRP--PSEEIEAENLN-TECTELTNF 601
>gi|147795652|emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]
Length = 1097
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 282/484 (58%), Positives = 348/484 (71%), Gaps = 11/484 (2%)
Query: 86 VAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVS 145
V GP DID LCVGP +ATR +DFFG+L +ML E P V +L PVPDA VPV++FKF+GVS
Sbjct: 283 VHGPGADIDTLCVGPRHATREEDFFGELHKMLSEMPEVTELHPVPDAHVPVMRFKFSGVS 342
Query: 146 VDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLR 205
+DLLYA+L VIPEDLD QDS+L N DEQTV SLNGCRVTD+IL LVPNI+NFR+TLR
Sbjct: 343 IDLLYAKLSLWVIPEDLDVSQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLR 402
Query: 206 CLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPV 265
+RFWAKRRG+YSN GFLGGINWALLVAR+CQLYPNALP++LVSRFF+++ W+WPNPV
Sbjct: 403 FMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPV 462
Query: 266 MLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAK 325
MLC I+ + VWDPR +DR HLMPIITP+YPC NSSYNVSS+TLRIM EEF+R
Sbjct: 463 MLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMSEEFKRGN 522
Query: 326 ELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMI 385
E+ E +EA K W TL EPY FF ++KNYLQI IAA+NA D R+WKGWVESRLRQL I
Sbjct: 523 EISEVMEANKADWXTLCEPYPFFEAYKNYLQIEIAAENADDLRKWKGWVESRLRQLTLKI 582
Query: 386 ERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSH 445
ER +LQC +PGDFS+ S C YFMGL RKQGV +GE+FD+RLTV+EFK H
Sbjct: 583 ERHTYNMLQCHPHPGDFSDKS--RPFHCCYFMGLQRKQGVPASEGEQFDIRLTVDEFK-H 639
Query: 446 VVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRP--PKSLNEKKRKRIEVIESTKLKKS 503
V MY+ WK GM+IHV H+R ++IP+FVFPGGVRP P + ++R+ +E ST
Sbjct: 640 SVGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGVRPSRPTKVASERRRVLEPNVST----- 694
Query: 504 ESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSVEPSTSSVSSSTSASSRPQRPAVSIET 563
++ G +K + + V + S K + S+ V SS S ++ +++
Sbjct: 695 QAVLEGAEDSKKRKREDENVETN-SRNAKCLVAAASSSHEVLSSNPLVSTVNACSIKVDS 753
Query: 564 EDDN 567
D N
Sbjct: 754 MDIN 757
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 86/144 (59%), Gaps = 18/144 (12%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS P LDV T+ELEK L L+ S+EE++ R EVLGRLD IVK W+K ++ K
Sbjct: 20 EPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEVLGRLDQIVKIWVKAISRAK 79
Query: 62 GISDEEQIQEANAKLFTFGSYRLG-VAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQET 120
G+ +E+ +QEANAK+FTFGSYRLG ++G ++D + P G++
Sbjct: 80 GL-NEQLVQEANAKIFTFGSYRLGAISGLKINLDKSKLMPV---------GRVSN----- 124
Query: 121 PLVEDLTPVPDARVPVIKFKFNGV 144
VE+LT V D +V V+ + G+
Sbjct: 125 --VEELTVVIDCKVGVLPTTYLGL 146
>gi|334184470|ref|NP_001189603.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252670|gb|AEC07764.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 797
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 278/563 (49%), Positives = 373/563 (66%), Gaps = 29/563 (5%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E +S + P+ DV ELEK LVDE L+ S+EE++ R EV+ R+D IVK W+K++T +
Sbjct: 27 EPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVKQLTRQR 86
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G +D+ +++ANA +FTFGSYRLGV GP DID LCVGP Y R +DFF +L E
Sbjct: 87 GYTDQ-MVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAEME 145
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PV DA VPV+KFKF G+S+DLLYA + VIP+DLD S+L ++DEQTV SL
Sbjct: 146 EVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVRSL 205
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRV D+IL LVPN +FR+TLRCL++WAK+RG+YSN GFLGG+NWALLVAR+CQ YP
Sbjct: 206 NGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQFYP 265
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NA+P++LVSRFF+++ W+WPNPVMLC I+ + VWDPR N RDR HLMPIITP+YP
Sbjct: 266 NAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYP 325
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
C NSSYNVS +TLR+M E+FQ +C+EIE K+ W +LF+ Y FF ++KNYLQ+ + A
Sbjct: 326 CMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQVDVLA 385
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
+A D WKGWVESR RQL IERD G+L C P ++ + S K C +FMGL R
Sbjct: 386 ADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTS-KQFRHCAFFMGLQR 444
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPP 481
G Q+ ++FD+R TV+EF+ V MY W+ GM +HVSH+R + +P FVFP G +
Sbjct: 445 ADGFGGQECQQFDIRGTVDEFRQEVN-MYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRS 503
Query: 482 K------------------SLNE------KKRKRIEVIESTKLKKSESSTAGHSSGQKSS 517
+ SL++ K++ E++ S K+ + ++ + +S
Sbjct: 504 RQSRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAAS 563
Query: 518 QTESGVALDGSH--GLKSGPSVE 538
SG+ G+ G+ GP E
Sbjct: 564 PDSSGITTSGTPQIGIVPGPRAE 586
>gi|79323064|ref|NP_001031417.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252669|gb|AEC07763.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 786
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 278/563 (49%), Positives = 373/563 (66%), Gaps = 29/563 (5%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E +S + P+ DV ELEK LVDE L+ S+EE++ R EV+ R+D IVK W+K++T +
Sbjct: 27 EPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVKQLTRQR 86
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G +D+ +++ANA +FTFGSYRLGV GP DID LCVGP Y R +DFF +L E
Sbjct: 87 GYTDQ-MVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAEME 145
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PV DA VPV+KFKF G+S+DLLYA + VIP+DLD S+L ++DEQTV SL
Sbjct: 146 EVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVRSL 205
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRV D+IL LVPN +FR+TLRCL++WAK+RG+YSN GFLGG+NWALLVAR+CQ YP
Sbjct: 206 NGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQFYP 265
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NA+P++LVSRFF+++ W+WPNPVMLC I+ + VWDPR N RDR HLMPIITP+YP
Sbjct: 266 NAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYP 325
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
C NSSYNVS +TLR+M E+FQ +C+EIE K+ W +LF+ Y FF ++KNYLQ+ + A
Sbjct: 326 CMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQVDVLA 385
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
+A D WKGWVESR RQL IERD G+L C P ++ + S K C +FMGL R
Sbjct: 386 ADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTS-KQFRHCAFFMGLQR 444
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPP 481
G Q+ ++FD+R TV+EF+ V MY W+ GM +HVSH+R + +P FVFP G +
Sbjct: 445 ADGFGGQECQQFDIRGTVDEFRQEVN-MYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRS 503
Query: 482 K------------------SLNE------KKRKRIEVIESTKLKKSESSTAGHSSGQKSS 517
+ SL++ K++ E++ S K+ + ++ + +S
Sbjct: 504 RQSRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAAS 563
Query: 518 QTESGVALDGSH--GLKSGPSVE 538
SG+ G+ G+ GP E
Sbjct: 564 PDSSGITTSGTPQIGIVPGPRAE 586
>gi|18400958|ref|NP_565611.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|31747891|gb|AAF66438.2|AF255297_1 nuclear poly(A) polymerase [Arabidopsis thaliana]
gi|14532700|gb|AAK64151.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|18491197|gb|AAL69501.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|20197361|gb|AAC42245.2| putative poly(A) polymerase [Arabidopsis thaliana]
gi|330252667|gb|AEC07761.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 800
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 278/563 (49%), Positives = 373/563 (66%), Gaps = 29/563 (5%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E +S + P+ DV ELEK LVDE L+ S+EE++ R EV+ R+D IVK W+K++T +
Sbjct: 27 EPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVKQLTRQR 86
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G +D+ +++ANA +FTFGSYRLGV GP DID LCVGP Y R +DFF +L E
Sbjct: 87 GYTDQ-MVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAEME 145
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PV DA VPV+KFKF G+S+DLLYA + VIP+DLD S+L ++DEQTV SL
Sbjct: 146 EVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVRSL 205
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRV D+IL LVPN +FR+TLRCL++WAK+RG+YSN GFLGG+NWALLVAR+CQ YP
Sbjct: 206 NGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQFYP 265
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NA+P++LVSRFF+++ W+WPNPVMLC I+ + VWDPR N RDR HLMPIITP+YP
Sbjct: 266 NAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYP 325
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
C NSSYNVS +TLR+M E+FQ +C+EIE K+ W +LF+ Y FF ++KNYLQ+ + A
Sbjct: 326 CMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQVDVLA 385
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
+A D WKGWVESR RQL IERD G+L C P ++ + S K C +FMGL R
Sbjct: 386 ADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTS-KQFRHCAFFMGLQR 444
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPP 481
G Q+ ++FD+R TV+EF+ V MY W+ GM +HVSH+R + +P FVFP G +
Sbjct: 445 ADGFGGQECQQFDIRGTVDEFRQEVN-MYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRS 503
Query: 482 K------------------SLNE------KKRKRIEVIESTKLKKSESSTAGHSSGQKSS 517
+ SL++ K++ E++ S K+ + ++ + +S
Sbjct: 504 RQSRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAAS 563
Query: 518 QTESGVALDGSH--GLKSGPSVE 538
SG+ G+ G+ GP E
Sbjct: 564 PDSSGITTSGTPQIGIVPGPRAE 586
>gi|30682917|ref|NP_850071.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252668|gb|AEC07762.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 787
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 278/563 (49%), Positives = 373/563 (66%), Gaps = 29/563 (5%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E +S + P+ DV ELEK LVDE L+ S+EE++ R EV+ R+D IVK W+K++T +
Sbjct: 27 EPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVKQLTRQR 86
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G +D+ +++ANA +FTFGSYRLGV GP DID LCVGP Y R +DFF +L E
Sbjct: 87 GYTDQ-MVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAEME 145
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PV DA VPV+KFKF G+S+DLLYA + VIP+DLD S+L ++DEQTV SL
Sbjct: 146 EVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVRSL 205
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRV D+IL LVPN +FR+TLRCL++WAK+RG+YSN GFLGG+NWALLVAR+CQ YP
Sbjct: 206 NGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQFYP 265
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NA+P++LVSRFF+++ W+WPNPVMLC I+ + VWDPR N RDR HLMPIITP+YP
Sbjct: 266 NAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYP 325
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
C NSSYNVS +TLR+M E+FQ +C+EIE K+ W +LF+ Y FF ++KNYLQ+ + A
Sbjct: 326 CMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQVDVLA 385
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
+A D WKGWVESR RQL IERD G+L C P ++ + S K C +FMGL R
Sbjct: 386 ADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTS-KQFRHCAFFMGLQR 444
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPP 481
G Q+ ++FD+R TV+EF+ V MY W+ GM +HVSH+R + +P FVFP G +
Sbjct: 445 ADGFGGQECQQFDIRGTVDEFRQEVN-MYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRS 503
Query: 482 K------------------SLNE------KKRKRIEVIESTKLKKSESSTAGHSSGQKSS 517
+ SL++ K++ E++ S K+ + ++ + +S
Sbjct: 504 RQSRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAAS 563
Query: 518 QTESGVALDGSH--GLKSGPSVE 538
SG+ G+ G+ GP E
Sbjct: 564 PDSSGITTSGTPQIGIVPGPRAE 586
>gi|167998971|ref|XP_001752191.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696586|gb|EDQ82924.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 553
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 277/479 (57%), Positives = 354/479 (73%), Gaps = 4/479 (0%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IST+ PT +D ++TK+LE+ + L S EE + R EVLGRLD +V W+K ++ K
Sbjct: 11 EPISTADPTEVDYVNTKQLEECVKGLALQGSREEEVRREEVLGRLDELVNVWVKSMSRKK 70
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G++DE ++EA K+FTFGSYRLGV GP DID LCVGPCY TR +DFF +L +LQ+T
Sbjct: 71 GLNDE-YVREARCKIFTFGSYRLGVHGPGADIDTLCVGPCYVTREEDFFVELHDLLQKTE 129
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L VPDA VPV+ F+FNG+ +DLLYA+L VIPE+LD LQD++L N+DEQ+V SL
Sbjct: 130 GVTELHTVPDAHVPVMSFEFNGIPIDLLYARLPLWVIPEELDILQDTILQNVDEQSVRSL 189
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTDRIL LVPN+ +FR+TLR ++ WAKRRG+YSN +GFLGG+NWALLVAR+CQLYP
Sbjct: 190 NGCRVTDRILRLVPNMEHFRTTLRYVKLWAKRRGVYSNVIGFLGGVNWALLVARICQLYP 249
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NA+P+VL+SRFF+++ W+WPNPVMLC I+ + VWDPR N RDR HLMPIITP+YP
Sbjct: 250 NAVPSVLLSRFFRVYKQWRWPNPVMLCAIEEGPLGLPVWDPRRNPRDRSHLMPIITPTYP 309
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
C NSS+NVS++TLR+M EEF+R +C+ +++ W LFEPY FF S+KNYLQI I+A
Sbjct: 310 CQNSSFNVSNSTLRVMTEEFKRGDSICDSLDSKVADWSKLFEPYPFFESYKNYLQIDISA 369
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
+ D R WKGWVESRLRQLI +E+D G LQC +P F + S K C +F+ L R
Sbjct: 370 GDEEDLRIWKGWVESRLRQLILKVEKDTFGALQCHPHPSAFHDTS-KRVQVCSFFVALQR 428
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRP 480
KQG +P FDM T+ EFK H V Y WK M+IHVSH+R + IP +VFP G+RP
Sbjct: 429 KQG-APPSSTPFDMCHTIAEFK-HSVNQYLLWKPTMKIHVSHVRPKQIPTYVFPNGIRP 485
>gi|30689510|ref|NP_849561.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|17978937|gb|AAL47435.1| AT4g32850/T16I18_60 [Arabidopsis thaliana]
gi|23308169|gb|AAN18054.1| At4g32850/T16I18_60 [Arabidopsis thaliana]
gi|332660730|gb|AEE86130.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 741
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/479 (55%), Positives = 344/479 (71%), Gaps = 3/479 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + P+ D+ ELEK LVDE L+ S+++++ R EVLGR+D IVK W+K++T +G
Sbjct: 27 LSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLTQQRGY 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ +++ANA +FTFGSYRLGV GP DID LCVGP Y R +DFF L +L E V
Sbjct: 87 TDQ-MVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEV 145
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF G+ +DLLYA + V+P+DLD S+L +DE TV SLNG
Sbjct: 146 TELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNG 205
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN +FR+TLRCL++WAK+RG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 206 CRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNA 265
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WPNPVMLC I+ + VWD R N RDR HLMPIITP+YPC
Sbjct: 266 IPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCM 325
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS +TLR+M E+FQ + +EIE K+ W +LFE Y FF ++KNYLQ+ I A +
Sbjct: 326 NSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAAD 385
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
A D WKGWVESR RQL IERD G+L C P ++ + + + C +FMGL R +
Sbjct: 386 AEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVD-TARQFLHCAFFMGLQRAE 444
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPK 482
GV Q+ ++FD+R TV+EF+ V MY WK GM + VSH+R + +P FVFP G R P+
Sbjct: 445 GVGGQECQQFDIRGTVDEFRQEVN-MYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPR 502
>gi|42570181|ref|NP_849562.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|79610218|ref|NP_974670.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660726|gb|AEE86126.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660728|gb|AEE86128.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 738
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/479 (55%), Positives = 344/479 (71%), Gaps = 3/479 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + P+ D+ ELEK LVDE L+ S+++++ R EVLGR+D IVK W+K++T +G
Sbjct: 27 LSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLTQQRGY 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ +++ANA +FTFGSYRLGV GP DID LCVGP Y R +DFF L +L E V
Sbjct: 87 TDQ-MVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEV 145
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF G+ +DLLYA + V+P+DLD S+L +DE TV SLNG
Sbjct: 146 TELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNG 205
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN +FR+TLRCL++WAK+RG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 206 CRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNA 265
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WPNPVMLC I+ + VWD R N RDR HLMPIITP+YPC
Sbjct: 266 IPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCM 325
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS +TLR+M E+FQ + +EIE K+ W +LFE Y FF ++KNYLQ+ I A +
Sbjct: 326 NSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAAD 385
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
A D WKGWVESR RQL IERD G+L C P ++ + + + C +FMGL R +
Sbjct: 386 AEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVD-TARQFLHCAFFMGLQRAE 444
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPK 482
GV Q+ ++FD+R TV+EF+ V MY WK GM + VSH+R + +P FVFP G R P+
Sbjct: 445 GVGGQECQQFDIRGTVDEFRQEVN-MYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPR 502
>gi|186515708|ref|NP_001119103.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|227202692|dbj|BAH56819.1| AT4G32850 [Arabidopsis thaliana]
gi|332660735|gb|AEE86135.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/479 (55%), Positives = 344/479 (71%), Gaps = 3/479 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + P+ D+ ELEK LVDE L+ S+++++ R EVLGR+D IVK W+K++T +G
Sbjct: 27 LSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLTQQRGY 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ +++ANA +FTFGSYRLGV GP DID LCVGP Y R +DFF L +L E V
Sbjct: 87 TDQ-MVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEV 145
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF G+ +DLLYA + V+P+DLD S+L +DE TV SLNG
Sbjct: 146 TELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNG 205
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN +FR+TLRCL++WAK+RG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 206 CRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNA 265
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WPNPVMLC I+ + VWD R N RDR HLMPIITP+YPC
Sbjct: 266 IPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCM 325
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS +TLR+M E+FQ + +EIE K+ W +LFE Y FF ++KNYLQ+ I A +
Sbjct: 326 NSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAAD 385
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
A D WKGWVESR RQL IERD G+L C P ++ + + + C +FMGL R +
Sbjct: 386 AEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVD-TARQFLHCAFFMGLQRAE 444
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPK 482
GV Q+ ++FD+R TV+EF+ V MY WK GM + VSH+R + +P FVFP G R P+
Sbjct: 445 GVGGQECQQFDIRGTVDEFRQEVN-MYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPR 502
>gi|42573145|ref|NP_974669.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|186515704|ref|NP_001119102.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|222422953|dbj|BAH19461.1| AT4G32850 [Arabidopsis thaliana]
gi|332660729|gb|AEE86129.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660734|gb|AEE86134.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/479 (55%), Positives = 344/479 (71%), Gaps = 3/479 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + P+ D+ ELEK LVDE L+ S+++++ R EVLGR+D IVK W+K++T +G
Sbjct: 27 LSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLTQQRGY 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ +++ANA +FTFGSYRLGV GP DID LCVGP Y R +DFF L +L E V
Sbjct: 87 TDQ-MVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEV 145
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF G+ +DLLYA + V+P+DLD S+L +DE TV SLNG
Sbjct: 146 TELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNG 205
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN +FR+TLRCL++WAK+RG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 206 CRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNA 265
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WPNPVMLC I+ + VWD R N RDR HLMPIITP+YPC
Sbjct: 266 IPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCM 325
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS +TLR+M E+FQ + +EIE K+ W +LFE Y FF ++KNYLQ+ I A +
Sbjct: 326 NSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAAD 385
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
A D WKGWVESR RQL IERD G+L C P ++ + + + C +FMGL R +
Sbjct: 386 AEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVD-TARQFLHCAFFMGLQRAE 444
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPK 482
GV Q+ ++FD+R TV+EF+ V MY WK GM + VSH+R + +P FVFP G R P+
Sbjct: 445 GVGGQECQQFDIRGTVDEFRQEVN-MYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPR 502
>gi|32527646|gb|AAP86216.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 737
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/479 (55%), Positives = 344/479 (71%), Gaps = 3/479 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + P+ D+ ELEK LVDE L+ S+++++ R EVLGR+D IVK W+K++T +G
Sbjct: 26 LSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLTQQRGY 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ +++ANA +FTFGSYRLGV GP DID LCVGP Y R +DFF L +L E V
Sbjct: 86 TDQ-MVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF G+ +DLLYA + V+P+DLD S+L +DE TV SLNG
Sbjct: 145 TELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN +FR+TLRCL++WAK+RG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 205 CRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WPNPVMLC I+ + VWD R N RDR HLMPIITP+YPC
Sbjct: 265 IPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCM 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS +TLR+M E+FQ + +EIE K+ W +LFE Y FF ++KNYLQ+ I A +
Sbjct: 325 NSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAAD 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
A D WKGWVESR RQL IERD G+L C P ++ + + + C +FMGL R +
Sbjct: 385 AEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVD-TARQFLHCAFFMGLQRAE 443
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPK 482
GV Q+ ++FD+R TV+EF+ V MY WK GM + VSH+R + +P FVFP G R P+
Sbjct: 444 GVGGQECQQFDIRGTVDEFRQEVN-MYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPR 501
>gi|42567333|ref|NP_195011.4| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660727|gb|AEE86127.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 735
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/479 (55%), Positives = 344/479 (71%), Gaps = 3/479 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + P+ D+ ELEK LVDE L+ S+++++ R EVLGR+D IVK W+K++T +G
Sbjct: 27 LSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLTQQRGY 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ +++ANA +FTFGSYRLGV GP DID LCVGP Y R +DFF L +L E V
Sbjct: 87 TDQ-MVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEV 145
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF G+ +DLLYA + V+P+DLD S+L +DE TV SLNG
Sbjct: 146 TELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNG 205
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN +FR+TLRCL++WAK+RG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 206 CRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNA 265
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WPNPVMLC I+ + VWD R N RDR HLMPIITP+YPC
Sbjct: 266 IPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCM 325
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS +TLR+M E+FQ + +EIE K+ W +LFE Y FF ++KNYLQ+ I A +
Sbjct: 326 NSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAAD 385
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
A D WKGWVESR RQL IERD G+L C P ++ + + + C +FMGL R +
Sbjct: 386 AEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVD-TARQFLHCAFFMGLQRAE 444
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPK 482
GV Q+ ++FD+R TV+EF+ V MY WK GM + VSH+R + +P FVFP G R P+
Sbjct: 445 GVGGQECQQFDIRGTVDEFRQEVN-MYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPR 502
>gi|79326212|ref|NP_001031779.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660733|gb|AEE86133.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 765
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/479 (55%), Positives = 344/479 (71%), Gaps = 3/479 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + P+ D+ ELEK LVDE L+ S+++++ R EVLGR+D IVK W+K++T +G
Sbjct: 27 LSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLTQQRGY 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ +++ANA +FTFGSYRLGV GP DID LCVGP Y R +DFF L +L E V
Sbjct: 87 TDQ-MVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEV 145
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF G+ +DLLYA + V+P+DLD S+L +DE TV SLNG
Sbjct: 146 TELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNG 205
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN +FR+TLRCL++WAK+RG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 206 CRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNA 265
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WPNPVMLC I+ + VWD R N RDR HLMPIITP+YPC
Sbjct: 266 IPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCM 325
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS +TLR+M E+FQ + +EIE K+ W +LFE Y FF ++KNYLQ+ I A +
Sbjct: 326 NSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAAD 385
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
A D WKGWVESR RQL IERD G+L C P ++ + + + C +FMGL R +
Sbjct: 386 AEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVD-TARQFLHCAFFMGLQRAE 444
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPK 482
GV Q+ ++FD+R TV+EF+ V MY WK GM + VSH+R + +P FVFP G R P+
Sbjct: 445 GVGGQECQQFDIRGTVDEFRQEVN-MYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPR 502
>gi|79326203|ref|NP_001031778.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660732|gb|AEE86132.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 716
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 269/515 (52%), Positives = 355/515 (68%), Gaps = 3/515 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + P+ D+ ELEK LVDE L+ S+++++ R EVLGR+D IVK W+K++T +G
Sbjct: 27 LSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLTQQRGY 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ +++ANA +FTFGSYRLGV GP DID LCVGP Y R +DFF L +L E V
Sbjct: 87 TDQ-MVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEV 145
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF G+ +DLLYA + V+P+DLD S+L +DE TV SLNG
Sbjct: 146 TELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNG 205
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN +FR+TLRCL++WAK+RG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 206 CRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNA 265
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WPNPVMLC I+ + VWD R N RDR HLMPIITP+YPC
Sbjct: 266 IPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCM 325
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS +TLR+M E+FQ + +EIE K+ W +LFE Y FF ++KNYLQ+ I A +
Sbjct: 326 NSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAAD 385
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
A D WKGWVESR RQL IERD G+L C P ++ + + + C +FMGL R +
Sbjct: 386 AEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVD-TARQFLHCAFFMGLQRAE 444
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKS 483
GV Q+ ++FD+R TV+EF+ V MY WK GM + VSH+R + +P FVFP G R P+
Sbjct: 445 GVGGQECQQFDIRGTVDEFRQEVN-MYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQ 503
Query: 484 LNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQ 518
+ + E + S S H+ + S+
Sbjct: 504 SRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSE 538
>gi|356528904|ref|XP_003533037.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 790
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 312/689 (45%), Positives = 420/689 (60%), Gaps = 62/689 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PTV D+ T+ELEK L L+ S+EE+ R EVL RL IVK+W+K++T +G
Sbjct: 20 ISMAGPTVTDLQRTRELEKFLAVSGLYESKEEAAKREEVLHRLGEIVKNWVKQLTRLRGY 79
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ +++ANA + TFGSYRLGV GP D+D LC+GP Y R +DFF L +L V
Sbjct: 80 TDQ-MVEDANAVILTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFFYTLHDILANIEEV 138
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L P+PDA VPV+KFKF+G+S+DLLYA + ++PEDLD S+LHN+DE TV SLNG
Sbjct: 139 TELQPIPDAHVPVMKFKFDGISIDLLYASISRLIVPEDLDISDVSVLHNVDEPTVRSLNG 198
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN+ +FR+TLRCL+FWAKRRGIYSN GFLGG+N ALLVARVCQ YP A
Sbjct: 199 CRVADQILKLVPNVEHFRTTLRCLKFWAKRRGIYSNVTGFLGGVNLALLVARVCQFYPKA 258
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WP PVMLCPI+ + VW P N RDR H MPIITP+YPC
Sbjct: 259 VPSMLVSRFFRVYTQWRWPTPVMLCPIEENDLGFPVWHPGKNPRDRSHHMPIITPAYPCM 318
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS +TLR+M E+FQ ++C EIE K W LFE Y FF S+KNYLQ+ + A +
Sbjct: 319 NSSYNVSMSTLRVMMEQFQYGNKICGEIELSKDCWKALFEKYSFFESYKNYLQVDVVAAD 378
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
A D R WKGWVESRLRQL MIERD G LQC Y +F + S + + C +FMGL RK+
Sbjct: 379 ADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTS-RQCAHCAFFMGLHRKE 437
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGV---RP 480
G Q+G++FD+R TVEEF+ H V MY WK GM+I+VSH+R + IP +VFP G RP
Sbjct: 438 GEVVQEGQQFDIRGTVEEFR-HSVNMYMFWKPGMEIYVSHVRRRQIPCYVFPDGYKRSRP 496
Query: 481 PKSLN-------------------EKKRKR-----IEVIESTKLKKSESSTAGHSSGQKS 516
+ + E+ RKR ++V E +K+ + G +++
Sbjct: 497 SRPTSQFENCKSFHNNEVSVTEHVERIRKRKNNDGVDVREDAIVKRQYACPPGDRLARRN 556
Query: 517 SQTESGVALDGSHGLKSGPSVE-----------------PSTSSVSSS-TSASSRPQRPA 558
S G++++ + SVE P +S SS TS S +
Sbjct: 557 SLGTGGLSVEAVSDSQELRSVECNHLSNSGQDDLDRTESPEAASNSSVITSVGSSEDIVS 616
Query: 559 VSIETEDDNATSVSQAQN--------FNQVGATVAAALATGTISSFCQNESLEELEPPEL 610
VS+ +N+ V N N V +A+G + Q+E ++L+P +
Sbjct: 617 VSVAGCVENSRGVEMMNNGRFEDTTYGNDSVTLVKNIVASG--NEVFQHELQQQLQPNAM 674
Query: 611 TAPCFKTA----FVATQKPIIKLQFSSLV 635
+A A Q+P+I+ + S +
Sbjct: 675 LGMVLDSAEKVLSEAVQEPVIRHEIESTI 703
>gi|7270232|emb|CAB80002.1| putative poly(A) polymerase [Arabidopsis thaliana]
Length = 729
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 269/515 (52%), Positives = 355/515 (68%), Gaps = 3/515 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + P+ D+ ELEK LVDE L+ S+++++ R EVLGR+D IVK W+K++T +G
Sbjct: 26 LSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLTQQRGY 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ +++ANA +FTFGSYRLGV GP DID LCVGP Y R +DFF L +L E V
Sbjct: 86 TDQ-MVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF G+ +DLLYA + V+P+DLD S+L +DE TV SLNG
Sbjct: 145 TELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN +FR+TLRCL++WAK+RG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 205 CRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WPNPVMLC I+ + VWD R N RDR HLMPIITP+YPC
Sbjct: 265 IPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCM 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS +TLR+M E+FQ + +EIE K+ W +LFE Y FF ++KNYLQ+ I A +
Sbjct: 325 NSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAAD 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
A D WKGWVESR RQL IERD G+L C P ++ + + + C +FMGL R +
Sbjct: 385 AEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVD-TARQFLHCAFFMGLQRAE 443
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKS 483
GV Q+ ++FD+R TV+EF+ V MY WK GM + VSH+R + +P FVFP G R P+
Sbjct: 444 GVGGQECQQFDIRGTVDEFRQEVN-MYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQ 502
Query: 484 LNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQ 518
+ + E + S S H+ + S+
Sbjct: 503 SRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSE 537
>gi|42573143|ref|NP_974668.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660731|gb|AEE86131.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 730
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 269/515 (52%), Positives = 355/515 (68%), Gaps = 3/515 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + P+ D+ ELEK LVDE L+ S+++++ R EVLGR+D IVK W+K++T +G
Sbjct: 27 LSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLTQQRGY 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ +++ANA +FTFGSYRLGV GP DID LCVGP Y R +DFF L +L E V
Sbjct: 87 TDQ-MVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEV 145
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF G+ +DLLYA + V+P+DLD S+L +DE TV SLNG
Sbjct: 146 TELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNG 205
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN +FR+TLRCL++WAK+RG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 206 CRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNA 265
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WPNPVMLC I+ + VWD R N RDR HLMPIITP+YPC
Sbjct: 266 IPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCM 325
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS +TLR+M E+FQ + +EIE K+ W +LFE Y FF ++KNYLQ+ I A +
Sbjct: 326 NSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAAD 385
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
A D WKGWVESR RQL IERD G+L C P ++ + + + C +FMGL R +
Sbjct: 386 AEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVD-TARQFLHCAFFMGLQRAE 444
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKS 483
GV Q+ ++FD+R TV+EF+ V MY WK GM + VSH+R + +P FVFP G R P+
Sbjct: 445 GVGGQECQQFDIRGTVDEFRQEVN-MYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQ 503
Query: 484 LNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQ 518
+ + E + S S H+ + S+
Sbjct: 504 SRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSE 538
>gi|356522230|ref|XP_003529750.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 766
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 285/550 (51%), Positives = 370/550 (67%), Gaps = 17/550 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P+ D+ T+ELEK L L+ S++E+ R EVL RL IVK W+K++T +G
Sbjct: 20 ISMAGPSATDLQRTRELEKFLAASGLYESKDEAAKREEVLHRLGEIVKSWVKQLTRLRGY 79
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ + +++ANA + TFGSYRLGV GP D+D LC+GP Y TR +DFF L +L V
Sbjct: 80 TGQ-MVEDANAIILTFGSYRLGVHGPGADLDTLCIGPSYVTREEDFFYTLHDILANVEEV 138
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L P+PDA VPV+KFKF+G+S+DLLYA + V+PEDLD S+LHN+DE TV SLNG
Sbjct: 139 TELQPIPDAHVPVMKFKFDGISIDLLYASISRLVLPEDLDISDVSVLHNVDEPTVRSLNG 198
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPNI +FR+TLRCL+FWAKRRGIYSN GFLGG+N ALLVARVCQ YPNA
Sbjct: 199 CRVADQILKLVPNIEHFRTTLRCLKFWAKRRGIYSNVTGFLGGVNLALLVARVCQFYPNA 258
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WP PVMLCPI+ + VW P N RDR H MPIITP+YPC
Sbjct: 259 VPSMLVSRFFRVYTQWRWPTPVMLCPIEENELGFPVWHPGKNPRDRSHHMPIITPAYPCM 318
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS++TLR+M ++FQ ++C EIE + W LFE Y FF S+KNYLQ+ + A +
Sbjct: 319 NSSYNVSTSTLRVMMDQFQYGNKICGEIELSRACWKALFEQYSFFESYKNYLQVDVVAAD 378
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
A D R WKGWVESRLRQL MIERD G LQC Y +F + S + + C +FMGL RKQ
Sbjct: 379 ADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTS-RLCAHCAFFMGLQRKQ 437
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKS 483
G Q+G++FD+R TVEEF+ H V MY WK GM+I+VSH+R + IP +V P G
Sbjct: 438 GEVVQEGQQFDIRGTVEEFR-HSVNMYMFWKPGMEIYVSHVRRRQIPFYVVPDGY----- 491
Query: 484 LNEKKRKRI----EVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSVEP 539
KR R+ +E+ K +E S H + + GV + G +K S P
Sbjct: 492 ----KRSRLSRPTSQVENCKSFHNEVSGTEHVERIRKRKNNDGVDVRGDAIVKR-QSASP 546
Query: 540 STSSVSSSTS 549
S ++ +S
Sbjct: 547 SEDRLARHSS 556
>gi|168067163|ref|XP_001785494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662901|gb|EDQ49701.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 494
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 276/479 (57%), Positives = 350/479 (73%), Gaps = 4/479 (0%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IST+ PT +D +TK+LE+ + L S EE + R EVLG LD +V W+K V+ K
Sbjct: 15 EPISTADPTEVDYANTKQLEEFVKGLALQGSREEEVRREEVLGLLDELVNVWVKMVSRMK 74
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G++DE ++EA K+FTFGSYRLGV GP DID LCVGPCY TR +DFF +L +LQ+T
Sbjct: 75 GLNDE-YVREARCKIFTFGSYRLGVHGPGADIDTLCVGPCYVTREEDFFVELHDLLQKTD 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L VPDA VPV+ F+FNG+ +DLLYA+L VIPE+LD LQDS+L N+DEQ+V SL
Sbjct: 134 GVTELHTVPDAHVPVMSFEFNGIPIDLLYARLPLWVIPEELDILQDSILQNVDEQSVRSL 193
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTDRIL LVPNI +FR+TLR ++ WAKRRG+YSN +GFLGG+NWALLVAR+CQLYP
Sbjct: 194 NGCRVTDRILRLVPNIEHFRTTLRYVKLWAKRRGVYSNVIGFLGGVNWALLVARICQLYP 253
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NA+P+VL+SRFF+++ W+WPNPVMLC I+ ++ +WDPR N RDR HLMPIITP+YP
Sbjct: 254 NAVPSVLLSRFFRVYKQWRWPNPVMLCAIEEGSLGLPIWDPRKNPRDRSHLMPIITPTYP 313
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
C NSS+NVS++TLR+M EEF+R +C+ +++ W LFEPY FF S+KNYLQI I A
Sbjct: 314 CQNSSFNVSNSTLRVMTEEFKRGDGVCDSLDSKVADWSKLFEPYPFFESYKNYLQIEITA 373
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
+ D R WKGWVESRLRQLI +E+D G+LQC +P F + S K C +F+ L R
Sbjct: 374 GDEEDLRIWKGWVESRLRQLILKVEKDTFGMLQCHPHPNAFHDTS-KKVQVCSFFVALQR 432
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRP 480
KQG FDM T+ EFK H V Y WK M+I VSH+R + IP +VFP G+RP
Sbjct: 433 KQGAQ-HSSTPFDMCHTIAEFK-HSVNQYLLWKPTMKIGVSHVRPKQIPTYVFPNGIRP 489
>gi|58220773|gb|AAW68018.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 652
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 290/597 (48%), Positives = 385/597 (64%), Gaps = 36/597 (6%)
Query: 9 PTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQ 68
PTV D+ T ELEK LV+ L+ EEES R EVL +D IVK+W+K+VT+ KG S E+
Sbjct: 2 PTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKGYS-EQM 60
Query: 69 IQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTP 128
++EANA LFTFGSYRLGV GP DIDALC+GP Y R ++FF L+ L E V +L P
Sbjct: 61 VKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVTLYGALSEMEEVTELQP 120
Query: 129 VPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTD 188
VPDA VPV+KFKF G+ +DLLYA + VIP D D Q S+L ++DE TV SLNGCRV D
Sbjct: 121 VPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNGCRVAD 180
Query: 189 RILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVL 248
+IL LVPN FR TLRCL++WA+RRG+YSN G LGG++WALLVARVCQLYPNA+P++L
Sbjct: 181 QILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNAVPSML 240
Query: 249 VSRFFKIFAHWKWPNPVMLCPIQY-QAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSY 307
VSRFF++F W+WPNPVMLC I+ + VWDPR N RDR H+MPIITP+YPC NSSY
Sbjct: 241 VSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNSSY 300
Query: 308 NVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDF 367
NVS++TLR++ E+FQ ++C+EIE K +W +LFEP+ FF ++ YL + I A + D
Sbjct: 301 NVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLVVDIVADDDDDL 360
Query: 368 RQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSP 427
R WKGW+ESRLRQL IERD G+LQC P ++++ S++ + C ++MGL RK+G+
Sbjct: 361 RLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQ-CAHCAFYMGLSRKEGMKI 419
Query: 428 QDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGG---VRPPKSL 484
+ G+KFD+R TV+EF H + MY+ WK GM + V+H+R ++IP +VF G RPP +
Sbjct: 420 R-GQKFDIRGTVDEFM-HEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTRPPTPI 477
Query: 485 NEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQT-ESGVALDGSHGLKSGPSVEPSTSS 543
+++ R SG+ S+ + V+L G K S
Sbjct: 478 CAEQQDR--------------------SGKNDSEVCTTTVSLVGQLKRKYDSVGGADVDS 517
Query: 544 VSSSTSASSRPQRPAVSIETEDDN-------ATSVSQAQNFNQVGATVAAALATGTI 593
S AS P SI+ DD +TS ++ + G + AA G +
Sbjct: 518 FKSVRRASVSPACEEASIQLHDDANFGLTNCSTSPHGSEGSTESGNSCAAVGTIGLV 574
>gi|49388677|dbj|BAD25861.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
gi|125581374|gb|EAZ22305.1| hypothetical protein OsJ_05959 [Oryza sativa Japonica Group]
Length = 610
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 293/599 (48%), Positives = 391/599 (65%), Gaps = 33/599 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + PTV D+ T ELEK LV+ L+ EEES R EVL +D IVK+W+K+VT+ KG
Sbjct: 29 LSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKGY 88
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E+ ++EANA LFTFGSYRLGV GP DIDALC+GP Y R ++FF L+ L E V
Sbjct: 89 S-EQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVMLYGALSEMEEV 147
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF G+ +DLLYA + VIP D D Q S+L ++DE TV SLNG
Sbjct: 148 TELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNG 207
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN FR TLRCL++WA+RRG+YSN G LGG++WALLVARVCQLYPNA
Sbjct: 208 CRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNA 267
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQY-QAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
+P++LVSRFF++F W+WPNPVMLC I+ + VWDPR N RDR H+MPIITP+YPC
Sbjct: 268 VPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPC 327
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK 362
NSSYNVS++TLR++ E+FQ ++C+EIE K +W +LFEP+ FF ++ YL + I A
Sbjct: 328 MNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLVVDIVAD 387
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRK 422
+ D R WKGW+ESRLRQL IERD G+LQC P ++++ S++ + C ++MGL RK
Sbjct: 388 DDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQ-CAHCAFYMGLSRK 446
Query: 423 QGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGG---VR 479
+G+ + G+KFD+R TV+EF H + MY+ WK GM + V+H+R ++IP +VF G R
Sbjct: 447 EGMKIR-GQKFDIRGTVDEFM-HEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTR 504
Query: 480 PPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSVEP 539
PP + +++ +S K +T GQ + S D
Sbjct: 505 PPTPICAEQQD-----QSDKNDSEVCTTTASLVGQLKRKYHSVGGAD------------- 546
Query: 540 STSSVSSSTSASSRPQRPAVSIETEDD---NATSVSQAQNFNQVGATVA--AALATGTI 593
S S AS P SI+ DD T+ S + + ++ G+TV+ + A GTI
Sbjct: 547 -VDSFKSVRRASVSPACEEASIQLHDDANFGLTNCSTSPHGSE-GSTVSGNSCAAVGTI 603
>gi|125597568|gb|EAZ37348.1| hypothetical protein OsJ_21686 [Oryza sativa Japonica Group]
Length = 761
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 278/550 (50%), Positives = 366/550 (66%), Gaps = 14/550 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D+ T ELEK LV+ L+ S EES R EVLG LD IVKDW+K++T +G
Sbjct: 26 ISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDWVKQLTSQRGY 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ ++EANA LFTFGSYRLGV GP DID LCVGP Y R +DFF L +L +T V
Sbjct: 86 TDQ-MVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF+G+S+DLLYA + V+P DLD Q S+L+++DE TV SLNG
Sbjct: 145 TELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEVTVRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLR-CLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
CRV D+IL LVPN+ + + CL + GFLGG+NWALLVARVCQLYPN
Sbjct: 205 CRVADQILRLVPNVEDSSLMMSICLMVELSNN---AKVTGFLGGVNWALLVARVCQLYPN 261
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
A+P++LVSRFF++F W+WPNPVMLC I+ + VWDPR RDR H MPIITP+YPC
Sbjct: 262 AVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPC 321
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK 362
NSSYNVS++TLR+M E+FQ ++C+EI+ K W LFEP+ FF ++KNYLQ+ I A+
Sbjct: 322 MNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNYLQVDIIAE 381
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRK 422
+ D R WKGWVESRLRQL IERD G+LQC YP ++++ S + + C +FMGL RK
Sbjct: 382 DGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPS-RQCAHCAFFMGLSRK 440
Query: 423 QGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPK 482
+G Q+G++FD+R TV+EF+ H + MY W+ GM++ VSH+R + IP +VFP G + P
Sbjct: 441 EGAKIQEGQQFDIRGTVDEFR-HDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRP- 498
Query: 483 SLNEKKRKRIEVIESTKLKKSESSTAGHS-SGQKSSQTESGVALDGSHGLK-SGPSVEPS 540
+ + I + + E TA S GQ + ++ D G S+ PS
Sbjct: 499 ----RPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASISPS 554
Query: 541 TSSVSSSTSA 550
S V TS+
Sbjct: 555 ISPVHQKTSS 564
>gi|297598868|ref|NP_001046352.2| Os02g0227400 [Oryza sativa Japonica Group]
gi|255670737|dbj|BAF08266.2| Os02g0227400, partial [Oryza sativa Japonica Group]
Length = 602
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 293/599 (48%), Positives = 391/599 (65%), Gaps = 33/599 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + PTV D+ T ELEK LV+ L+ EEES R EVL +D IVK+W+K+VT+ KG
Sbjct: 21 LSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKGY 80
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E+ ++EANA LFTFGSYRLGV GP DIDALC+GP Y R ++FF L+ L E V
Sbjct: 81 S-EQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVMLYGALSEMEEV 139
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF G+ +DLLYA + VIP D D Q S+L ++DE TV SLNG
Sbjct: 140 TELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNG 199
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN FR TLRCL++WA+RRG+YSN G LGG++WALLVARVCQLYPNA
Sbjct: 200 CRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNA 259
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQY-QAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
+P++LVSRFF++F W+WPNPVMLC I+ + VWDPR N RDR H+MPIITP+YPC
Sbjct: 260 VPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPC 319
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK 362
NSSYNVS++TLR++ E+FQ ++C+EIE K +W +LFEP+ FF ++ YL + I A
Sbjct: 320 MNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLVVDIVAD 379
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRK 422
+ D R WKGW+ESRLRQL IERD G+LQC P ++++ S++ + C ++MGL RK
Sbjct: 380 DDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQ-CAHCAFYMGLSRK 438
Query: 423 QGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGG---VR 479
+G+ + G+KFD+R TV+EF H + MY+ WK GM + V+H+R ++IP +VF G R
Sbjct: 439 EGMKIR-GQKFDIRGTVDEFM-HEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTR 496
Query: 480 PPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSVEP 539
PP + +++ +S K +T GQ + S D
Sbjct: 497 PPTPICAEQQD-----QSDKNDSEVCTTTASLVGQLKRKYHSVGGAD------------- 538
Query: 540 STSSVSSSTSASSRPQRPAVSIETEDD---NATSVSQAQNFNQVGATVA--AALATGTI 593
S S AS P SI+ DD T+ S + + ++ G+TV+ + A GTI
Sbjct: 539 -VDSFKSVRRASVSPACEEASIQLHDDANFGLTNCSTSPHGSE-GSTVSGNSCAAVGTI 595
>gi|125555729|gb|EAZ01335.1| hypothetical protein OsI_23369 [Oryza sativa Indica Group]
Length = 760
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 278/550 (50%), Positives = 366/550 (66%), Gaps = 14/550 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D+ T ELEK LV+ L+ S EES R EVLG LD IVKDW+K++T +G
Sbjct: 26 ISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDWVKQLTSQRGY 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ ++EANA LFTFGSYRLGV GP DID LCVGP Y R +DFF L +L +T V
Sbjct: 86 TDQ-MVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF+G+S+DLLYA + V+P DLD Q S+L+++DE TV SLNG
Sbjct: 145 TELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEVTVRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLR-CLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
CRV D+IL LVPN+ + + CL + GFLGG+NWALLVARVCQLYPN
Sbjct: 205 CRVADQILRLVPNVEDSSLMMSICLMVELSNN---AKVTGFLGGVNWALLVARVCQLYPN 261
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
A+P++LVSRFF++F W+WPNPVMLC I+ + VWDPR RDR H MPIITP+YPC
Sbjct: 262 AVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPC 321
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK 362
NSSYNVS++TLR+M E+FQ ++C+EI+ K W LFEP+ FF ++KNYLQ+ I A+
Sbjct: 322 MNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNYLQVDIIAE 381
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRK 422
+ D R WKGWVESRLRQL IERD G+LQC YP ++++ S + + C +FMGL RK
Sbjct: 382 DGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPS-RQCAHCAFFMGLSRK 440
Query: 423 QGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPK 482
+G Q+G++FD+R TV+EF+ H + MY W+ GM++ VSH+R + IP +VFP G + P
Sbjct: 441 EGAKIQEGQQFDIRGTVDEFR-HDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRP- 498
Query: 483 SLNEKKRKRIEVIESTKLKKSESSTAGHS-SGQKSSQTESGVALDGSHGLK-SGPSVEPS 540
+ + I + + E TA S GQ + ++ D G S+ PS
Sbjct: 499 ----RPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASISPS 554
Query: 541 TSSVSSSTSA 550
S V TS+
Sbjct: 555 ISPVHQKTSS 564
>gi|125538688|gb|EAY85083.1| hypothetical protein OsI_06439 [Oryza sativa Indica Group]
Length = 683
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 292/599 (48%), Positives = 390/599 (65%), Gaps = 33/599 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + PTV D+ T ELEK LV+ L+ EEES R EVL +D IVK+W+K+VT+ KG
Sbjct: 28 LSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKGY 87
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E+ ++EANA LFTFGSYRLGV GP DIDALC+GP Y R ++FF L+ L E V
Sbjct: 88 S-EQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVTLYGALSEMEEV 146
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF G+ +DLLYA + VIP D D Q S+L ++DE TV SLNG
Sbjct: 147 TELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNG 206
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN FR TLRCL++WA+RRG+YSN G LGG++WALLVARVCQLYPNA
Sbjct: 207 CRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNA 266
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQY-QAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
+P++LVSRFF++F W+WPNPVMLC I+ + VWDPR N RDR H+MPIITP+YPC
Sbjct: 267 VPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPC 326
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK 362
NSSYNVS++TLR++ E+FQ ++C+EIE K +W +LFEP+ FF ++ YL + I A
Sbjct: 327 MNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLVVDIVAD 386
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRK 422
+ D R WKGW+ESRLRQL IERD G+LQC P ++++ S++ + C ++MGL RK
Sbjct: 387 DDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQ-CAHCAFYMGLSRK 445
Query: 423 QGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGG---VR 479
+G+ + G+KFD+R TV+EF H + MY+ WK GM + V+H+ ++IP +VF G R
Sbjct: 446 EGMKIR-GQKFDIRGTVDEFM-HEIGMYTQWKSGMDLAVTHVCKKEIPLYVFEQGCQKTR 503
Query: 480 PPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSVEP 539
PP + +++ +S K +T GQ + S D
Sbjct: 504 PPTPICAEQQD-----QSDKNDSEVCTTTASLVGQLKRKYHSVGGAD------------- 545
Query: 540 STSSVSSSTSASSRPQRPAVSIETEDD---NATSVSQAQNFNQVGATVA--AALATGTI 593
S S AS P SI+ DD T+ S + + ++ G+TV+ + A GTI
Sbjct: 546 -VDSFKSVRRASVSPACEEASIQLHDDANFGLTNCSTSPHGSE-GSTVSGNSCAAVGTI 602
>gi|356511273|ref|XP_003524351.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Glycine
max]
Length = 702
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 295/581 (50%), Positives = 378/581 (65%), Gaps = 33/581 (5%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS PT DVI T+ELEK L D L+ +++E++ EVLGRLD IVK W+K ++ K
Sbjct: 21 EPISLGGPTEYDVIKTRELEKYLQDAGLYENQQEAV--XEVLGRLDQIVKIWVKIISRAK 78
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G+ +++ +QEANAK+FTFGSY LGV P +ID LCVGP +A+R +DFFG L RML + P
Sbjct: 79 GL-NKQLVQEANAKIFTFGSYXLGVHSPGANIDTLCVGPRHASRDEDFFGDLHRMLSKMP 137
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVPDA VPV++FKFNGV +DLLYA+L VIPEDLD Q+ +L N DE+TV SL
Sbjct: 138 EVTELHPVPDAHVPVMRFKFNGVYIDLLYAKLSLRVIPEDLDISQELILQNADEETVCSL 197
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSN--AMGFLGGINWALLVARVCQL 239
NGCRVTD++L ++NF +TLRC++FWAK G+Y +LGGINWALLVAR C L
Sbjct: 198 NGCRVTDKVL-----LQNFCTTLRCMKFWAKHCGVYXKNFVTSYLGGINWALLVARTCXL 252
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
+PNALPN+LVSRFF+++ W WPNPVMLC I+ ++ +WDPR DR HLMPIITP+
Sbjct: 253 FPNALPNMLVSRFFRVYTQWCWPNPVMLCAIEEGSVGLQIWDPRRYPNDRFHLMPIITPA 312
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
Y C NSSYNVSS TL IM EEFQR E+CE TW + + S+KNYLQI I
Sbjct: 313 YACMNSSYNVSSITLCIMTEEFQRGNEICEYFAQDDLTWAFKLK-FPCSNSYKNYLQIDI 371
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGL 419
+ +NA D R+WKGWVES LRQL IER + G+LQC +PGD S+ S C FM L
Sbjct: 372 SGENADDLRKWKGWVESHLRQLRLQIERHIYGMLQCHPHPGDSSDKS--RPFHCSNFMAL 429
Query: 420 GRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVR 479
RKQGV DG +FD+RLTVEEFK H V +Y+ W GM +HV H++ ++IP FVFPG VR
Sbjct: 430 QRKQGVPVNDGGQFDIRLTVEEFK-HSVNIYTLWIPGMDVHVPHVKHRNIPTFVFPGSVR 488
Query: 480 P--PKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSV 537
P P + E K ++ + + G + +K Q E V D KS S+
Sbjct: 489 PSHPSKV---------TWEIKKSQEGKMAVLGANDDRKRKQAEDSV--DSLRNSKSMASL 537
Query: 538 EPSTSSVSSSTSASSRPQRPAVS--IETEDDNATSVSQAQN 576
PS+ V + P PA S +++ D S S+ Q+
Sbjct: 538 PPSSREVHEDEN----PISPASSCFVKSNDSEINSTSEQQS 574
>gi|255549812|ref|XP_002515957.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544862|gb|EEF46377.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 712
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 266/519 (51%), Positives = 345/519 (66%), Gaps = 50/519 (9%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT D+ T+ELEK+L D L+ S++E++ R EVL R+D
Sbjct: 23 ISTAGPTEADIQRTRELEKLLGDSGLYESKDEAVKREEVLARIDQ--------------- 67
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
V GP DID LCVGP Y R +DFF L +L E V
Sbjct: 68 ----------------------VHGPGADIDTLCVGPSYVNREEDFFFVLHNILAEMEEV 105
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV++FKF+G+S+DLLYA + V+PEDLD S+L+++DE TV SLNG
Sbjct: 106 TELQPVPDAHVPVMRFKFDGISIDLLYASISLLVVPEDLDISDVSVLYDVDEPTVRSLNG 165
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN+ +FR+TLRCL+FWAKRRG+YSN GFLGG+NWALLVAR+CQLYPNA
Sbjct: 166 CRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARICQLYPNA 225
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF+++ W+WPNPVMLCPI+ + +WDPR N RDR H MPIITP+YPC
Sbjct: 226 IPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSIWDPRKNPRDRTHHMPIITPAYPCM 285
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS++TLR+M E+FQ ++CEEIE K W TLFEPY FF S+KNYLQ+ I A +
Sbjct: 286 NSSYNVSTSTLRVMMEQFQYGNKICEEIELIKTQWATLFEPYLFFESYKNYLQVDIVATD 345
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
D R WKGWVESRLRQL MI+RD G LQC YP ++ + S K + C +FMGL RKQ
Sbjct: 346 VDDLRAWKGWVESRLRQLTLMIDRDTYGKLQCHPYPHEYVDTS-KPCAHCAFFMGLQRKQ 404
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKS 483
G Q+G++FD+R TV+EF++ + MY WK GM+I+VSH+R + IP +VFP G R
Sbjct: 405 GEMIQEGQQFDIRGTVDEFRNSIN-MYMFWKPGMEIYVSHVRRKQIPSYVFPDGYR---- 459
Query: 484 LNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESG 522
+ R+ T ++S+ + G S + +E G
Sbjct: 460 --RARHPRV-----TAQQQSDKTCCGDSDAYGNGSSERG 491
>gi|242096166|ref|XP_002438573.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
gi|241916796|gb|EER89940.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
Length = 468
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 254/427 (59%), Positives = 322/427 (75%), Gaps = 2/427 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S P D+ T ELEK LV+ L+ S +ES R EVLG+LD IVKDW+K++T +G
Sbjct: 17 LSLLGPVEADLQRTAELEKFLVEAGLYESPDESARREEVLGKLDQIVKDWVKQLTSQRGY 76
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ ++EANA LFTFGSYRLGV GP DID LCVGP Y R +DFF L +L +T V
Sbjct: 77 TDQ-MVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHGILAQTEDV 135
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF+G+S+DLLYA + V+P DLD Q S+L+++DE TV SLNG
Sbjct: 136 TELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDEATVRSLNG 195
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+I+ LVPNI NFR+TLRCL++WAKRRG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 196 CRVADQIIRLVPNIENFRTTLRCLKYWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 255
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF++F W+WPNPVMLC I+ + VWDPR N RDR H MPIITP+YPC
Sbjct: 256 VPSMLVSRFFRVFTQWQWPNPVMLCSIEEDEVGFPVWDPRKNPRDRCHHMPIITPAYPCM 315
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSYNVS++TLR+M E+FQ ++C+EIE K +W LFEP+ FF ++KNYLQ+ I A++
Sbjct: 316 NSSYNVSTSTLRVMVEQFQFGNKICQEIEMNKASWSALFEPFQFFEAYKNYLQVDIIAED 375
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
D R WKGWVESRLRQL IERD G+LQC YP ++++ S + + C +FMGL RK+
Sbjct: 376 DEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPS-RQCAHCAFFMGLSRKE 434
Query: 424 GVSPQDG 430
GV Q+G
Sbjct: 435 GVKIQEG 441
>gi|357513525|ref|XP_003627051.1| Poly(A) polymerase [Medicago truncatula]
gi|355521073|gb|AET01527.1| Poly(A) polymerase [Medicago truncatula]
Length = 633
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 291/591 (49%), Positives = 373/591 (63%), Gaps = 55/591 (9%)
Query: 69 IQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTP 128
+++ANA + TFGSYRLGV GP D+D LC+GP Y R +DFF +L V +L P
Sbjct: 2 VEDANAVILTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFFYTFHDILASMDEVTELQP 61
Query: 129 VPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTD 188
VPDA VPV+KFKF+G+S+DLLYA + ++PE+LD S+LHN+DE TV SLNGCRV D
Sbjct: 62 VPDAHVPVMKFKFDGISIDLLYASISCLIVPEELDISDVSVLHNIDEPTVRSLNGCRVAD 121
Query: 189 RILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVL 248
+IL LVPNI FR+TLRCL+FWAKRRG+YSN GFLGG+NWALLVARVCQLYPNA+P++L
Sbjct: 122 QILKLVPNIEYFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSML 181
Query: 249 VSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYN 308
VSRFF+++ W+WPNPVMLC I+ + VW P N RDR HLMPIITP+YPC NSSYN
Sbjct: 182 VSRFFRVYTQWRWPNPVMLCSIEENELGFSVWHPLRNPRDRSHLMPIITPAYPCMNSSYN 241
Query: 309 VSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFR 368
VS++TLR+M E+FQ ++CE+IE K W LF PY FF +KN+LQI + A + D R
Sbjct: 242 VSASTLRVMMEQFQYGNKICEDIELNKVGWSALFVPYVFFEGYKNFLQIDVVAADVDDLR 301
Query: 369 QWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQ 428
WKGWVESRLRQL MIERD G LQC YP ++ +++ K S +FMGL RKQG Q
Sbjct: 302 AWKGWVESRLRQLTLMIERDTIGKLQCHPYPREYIDDTRKCSHSA-FFMGLQRKQGEVVQ 360
Query: 429 DGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGV---RP----- 480
+G++FD+R TVE F+ H + MY WK GM IHVSH+R + IP +VFP G RP
Sbjct: 361 EGQQFDIRGTVEAFR-HSINMYMFWKPGMDIHVSHIRRRQIPCYVFPDGFKRSRPSRSTV 419
Query: 481 -----PKSLNEK------------KRKRIE--VIESTKLKKS------ESSTAGH----- 510
PKSL E KRK + V + LKK ES T G+
Sbjct: 420 PVENRPKSLQENEVSGTELRGRNIKRKYDDKGVKQDVVLKKHCANPFVESLTPGNYAVSD 479
Query: 511 ----SSGQKSSQTESGV-ALDGSHGLKSGPSVEPSTSSVSSSTSASSRPQRPA-VSIETE 564
SG+ +S T S LD ++G ++S V+S +S P+ A VS+
Sbjct: 480 CQELKSGESTSLTNSEQDELDRRMSPEAGTECGSNSSGVTSVSSEDGSPEYVASVSVAGY 539
Query: 565 DDNATSVSQAQNFNQVGATVAA---ALATGTISSFCQNESLEE-----LEP 607
D++ +A N ++ T A L GT++S NE L++ LEP
Sbjct: 540 VDDSARAVEAMNNSRFDTTYMADSVKLGIGTLAS-ANNEVLQDTLQTHLEP 589
>gi|359484334|ref|XP_002280350.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
gi|297738746|emb|CBI27991.3| unnamed protein product [Vitis vinifera]
Length = 598
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 255/495 (51%), Positives = 341/495 (68%), Gaps = 8/495 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS PT + + ELEK+L D ++ EEE+ R E++ +L +VK W+K+VT KG
Sbjct: 17 ISYVKPTDFHIRRSFELEKVLWDGGVYQVEEEARKREEIIEKLRVVVKSWVKQVTRWKGY 76
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ ++ ANA + TFGSYRLGV GP +DID LC+GP Y R +DFF +L +L V
Sbjct: 77 TDK-MVENANALIVTFGSYRLGVHGPGSDIDTLCIGPSYVNREEDFFIRLHNILIGMEGV 135
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L P+P A VPV+KFKF GVS+DLLYA + V+P+DLD +S+L+ DE TV SL+G
Sbjct: 136 SELLPIPHAHVPVMKFKFEGVSIDLLYASVSHLVVPDDLDISNESILYEADEPTVRSLSG 195
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN+ +FR+TLRCL+FWAKRRG+YSN GFLGG+N ALLVARVCQLYPNA
Sbjct: 196 CRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNLALLVARVCQLYPNA 255
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
P++LVSRFF+++ W WPNPVMLCPI+ + + VWDPR N DR H MPIITP+YP
Sbjct: 256 NPSMLVSRFFRVYTQWHWPNPVMLCPIEDKELGFPVWDPRRNPLDRNHHMPIITPAYPNM 315
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NSSY+VS++TL M ++F A ++C +IE K +W LFEP+ FF S++NYLQ+ I A +
Sbjct: 316 NSSYSVSTSTLEAMMKQFHTANKICNDIELNKSSWGALFEPFLFFRSYQNYLQVDITATD 375
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
A D R WKGWVESRLRQL +ER G L C P ++ + S + C YFMGL +K
Sbjct: 376 ADDLRAWKGWVESRLRQLTLKVERCTIGKLLCVPCPREYVDTS-RQCCHCTYFMGLRKKP 434
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRP--- 480
GV + GE D+R+ +EFK +V M+S W GM+IHVSH+ +P +VFP R
Sbjct: 435 GV--EVGEVIDIRVATQEFKEEIVNMFSFWTPGMEIHVSHVLKNQLPSYVFPDEYRKRSQ 492
Query: 481 -PKSLNEKKRKRIEV 494
KS+N++ + + ++
Sbjct: 493 SSKSINQQHQNKRKI 507
>gi|42571529|ref|NP_973855.1| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|332191537|gb|AEE29658.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 586
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 288/586 (49%), Positives = 349/586 (59%), Gaps = 69/586 (11%)
Query: 116 MLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDE 175
ML E P V +L PVPDA VP++ FK NGVS+DLLYAQL VIPEDLD QDS+L N DE
Sbjct: 1 MLSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNADE 60
Query: 176 QTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVAR 235
QTV SLNGCRVTD+IL LVPNI+NFR+TLRC+RFWAKRRG+YSN GFLGGINWALLVAR
Sbjct: 61 QTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVAR 120
Query: 236 VCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPI 295
+CQLYPNALPN+LVSRFF++F W WPN + LC ++ VWDPR N +DR H+MPI
Sbjct: 121 ICQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPI 180
Query: 296 ITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYL 355
ITP+YPC NSSYNVS +TLRIM+ EFQR E+CE +E+ K W TLFEP+ FF ++KNYL
Sbjct: 181 ITPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAFFEAYKNYL 240
Query: 356 QIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHY 415
QI I+A N D R+WKGWVESRLRQL IER +L C +P DF + S C Y
Sbjct: 241 QIDISAANVDDLRKWKGWVESRLRQLTLKIERHF-KMLHCHPHPHDFQDTS--RPLHCSY 297
Query: 416 FMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFP 475
FMGL RKQGV +GE+FD+R TVEEFK H V Y+ W GM+I V H++ + +P+FVFP
Sbjct: 298 FMGLQRKQGVPAAEGEQFDIRRTVEEFK-HTVNAYTLWIPGMEISVGHIKRRSLPNFVFP 356
Query: 476 GGVRPPKS------LNEKKRKR------IEVIESTKLKKSESSTAGHSS---GQKSSQTE 520
GGVRP + N + R +T + S S AG +S G+K +
Sbjct: 357 GGVRPSHTSKGTWDSNRRSEHRNSSTSSAPAATTTTTEMSSESKAGSNSPVDGKKRKWGD 416
Query: 521 SGVALDGSHGLK-----------SGPSVEPSTSSVSSS------TSASSRP--------- 554
S D K G S PS S+ SS T+ S P
Sbjct: 417 SETLTDQPRNSKHIAVSVPVENCEGGSPNPSVGSICSSPMKDYCTNGKSEPISKDPPENV 476
Query: 555 ----QRPAVSI-----------ETEDDNATSVSQAQNFNQVGATVAAALATGTISSFCQN 599
+ P S+ ETE+ + Q Q+ VA AT TI F
Sbjct: 477 VAFSKDPPESLPIEKIATPQAHETEELEESFDFGNQVIEQISHKVAVLSATATIPPFEAT 536
Query: 600 --------ESLEELEP-PELTAPCFKTAFVATQKPIIKLQFSSLVK 636
E++EELE P V +KPIIKL F+SL K
Sbjct: 537 SNGSPFPYEAVEELEVLPTRQPDAAHRPSVQQRKPIIKLSFTSLGK 582
>gi|218195447|gb|EEC77874.1| hypothetical protein OsI_17161 [Oryza sativa Indica Group]
Length = 556
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 239/506 (47%), Positives = 316/506 (62%), Gaps = 16/506 (3%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS PT D+ ST LE++L +E L+ S EE+ R EVL L G+V W+KR+T +
Sbjct: 13 EPISLVGPTPADLESTARLERLLREEGLYESAEETAAREEVLRGLRGVVDRWVKRLTRQR 72
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G D A A + FGSYRLGV G +DIDAL VGP Y R DFFG L L ET
Sbjct: 73 GYPDG-MADRATALVLPFGSYRLGVHGRGSDIDALVVGPSYVDRDRDFFGALAAALAETA 131
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVP A VPVIK +F+GV VDL+YA + V+P DLD S+L LD T SL
Sbjct: 132 GVAELQPVPGAHVPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVLRGLDLATARSL 191
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RV D IL LVP+ FR+TLRC++ WAK RG+YSN GFLGG+ WA+LVARVC LYP
Sbjct: 192 NGVRVADEILRLVPDAAAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWAILVARVCLLYP 251
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQ----AMPHHVWDPRSNQRDRKHLMPIIT 297
NA P++L+ RFF++FA WKWP+PVML I++ + VWDPR N RD+ HLMPI+T
Sbjct: 252 NASPSMLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNPRDKIHLMPIVT 311
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEI---EAGKRTWITLFEPYHFFGSFKNY 354
P+YPC NS YNVS TLR++ E+ +C+EI +G W LF+P++FFG++K+Y
Sbjct: 312 PAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQPFNFFGAYKSY 371
Query: 355 LQIHIAAKNA--GDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFS----ENSVK 408
LQ+ + D R+WKGWVESRLR L +E D G+L C L+P ++ +
Sbjct: 372 LQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPYAAEPHNEPRR 431
Query: 409 SSSQCHYFMGLGRKQGVSPQDGEK-FDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQ 467
+F+GL + Q + FD+R T E FK V+MY W+ GM++ V+H+R +
Sbjct: 432 RRRTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEE-VYMYDYWRPGMEVAVAHVRRK 490
Query: 468 DIPDFVFPGGVRPPKSLNEKKRKRIE 493
D+P +V +R P ++ KRKR +
Sbjct: 491 DLPSYVLRQLLRSPGRHDQLKRKRAD 516
>gi|357168295|ref|XP_003581579.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 552
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/483 (48%), Positives = 303/483 (62%), Gaps = 14/483 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS PT D+ ST LEK L D L+ S EE R +VL L IV W+KR+T +G
Sbjct: 13 ISLLGPTPADLESTSRLEKHLRDAGLYESPEELAAREDVLCELRAIVDRWVKRLTAQRGY 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP-- 121
D + +A A + FGSYRLGV G +DIDAL VGP Y R DFFG L +L E
Sbjct: 73 PDG-MVSQATAPVLPFGSYRLGVHGRGSDIDALVVGPSYVDRDHDFFGVLGGVLSEMTDD 131
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVP A VPVIK +F GV VDLL+A + +V+PEDLD S+L +D TV S+
Sbjct: 132 AVTELQPVPGAHVPVIKMRFRGVQVDLLFASVCLAVVPEDLDLRDRSVLRGMDLATVRSV 191
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RV D IL LVP+ FR+TLRC++ WAK RG+YSN MGF GG+ WA+LVA VCQLYP
Sbjct: 192 NGVRVADEILRLVPDAGAFRTTLRCVKLWAKARGVYSNVMGFPGGVAWAILVAFVCQLYP 251
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQY--QAMPHHVWDPRSNQRDRKHLMPIITPS 299
NA P+VLVSRFFK+ A WKWPNPV L I++ + VWDPR N RDR HLMP++TP+
Sbjct: 252 NAAPSVLVSRFFKVLAPWKWPNPVKLRDIEHDDDDLRLLVWDPRRNPRDRTHLMPVVTPA 311
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
YPC NS YNVS TLR + ++ Q +C++I A W LFEP+HFF +K+YL++ +
Sbjct: 312 YPCMNSCYNVSHATLRTITQQLQIGNAVCQKIVASGAGWGALFEPFHFFKEYKSYLRVDV 371
Query: 360 AAKNA---GDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYF 416
GD R+WKGWVESRLRQL+ +E G+L C P ++ +F
Sbjct: 372 KVAGGGGEGDLREWKGWVESRLRQLVMRVETATAGMLLCHPNPQAYAAKPTDLQRTTSFF 431
Query: 417 MGLGRKQGVSPQDGEK-----FDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPD 471
+GL + Q + ++ FD+R T EEFK V+MY SW+ GM++ VSH R +D+P
Sbjct: 432 VGLSKPQPQPQEKEQQQPQVPFDLRETAEEFKRK-VYMYVSWRPGMEVEVSHNRRKDLPS 490
Query: 472 FVF 474
+V
Sbjct: 491 YVL 493
>gi|242074144|ref|XP_002447008.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
gi|241938191|gb|EES11336.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
Length = 548
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/502 (47%), Positives = 312/502 (62%), Gaps = 18/502 (3%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS PT D+ +T ELEK+L + ++ S +ES R EVL L GIV W+K++T+
Sbjct: 15 EPISLVGPTPADLEATAELEKVLREAGMYESPQESAVRAEVLRDLQGIVDRWVKQLTLKH 74
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE-T 120
G D + EA A L FGSYRLGV G +DIDAL VGP + R DFFG L L E T
Sbjct: 75 GYPDA-MVDEATALLLPFGSYRLGVHGGGSDIDALVVGPSFVDRDQDFFGVLAGALAEAT 133
Query: 121 PLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
V DL PVP A VPV+K +F GV VDL+YA + V+P DLD ++L LD T S
Sbjct: 134 EAVTDLQPVPGAHVPVMKLRFRGVQVDLVYASVNLPVVPRDLDLSDRAVLRGLDHVTARS 193
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
+NG RV D IL LVP+ FR+ LRC++ WAK RG+YSN GFLGG+ WA+LVARVCQLY
Sbjct: 194 MNGVRVADEILRLVPDAAAFRTALRCVKLWAKARGVYSNVSGFLGGVAWAILVARVCQLY 253
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQ---AMPHHVWDPRSNQRDRKHLMPIIT 297
PNA P++LVSRFFK+ + WKWP PVMLC I++ +P VWD R N RDR HLMP+IT
Sbjct: 254 PNAAPSMLVSRFFKVLSQWKWPTPVMLCDIEHDDELGLP--VWDGRRNPRDRTHLMPVIT 311
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEA-GKRTWITLFEPYHFFGSFKNYLQ 356
P+YPC N +YNVS T RI++E+ Q C+EI A G R W LF+P+ FF + K+YLQ
Sbjct: 312 PAYPCMNCTYNVSQATQRIIKEQIQAGHVACQEIAAGGDRGWGALFQPFPFFRTHKSYLQ 371
Query: 357 IH-IAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHY 415
+ A + R+WKGWVESRLRQL+ +ERD G L C P + +
Sbjct: 372 VDATVAGGEEELREWKGWVESRLRQLVAKVERDTFGELLCHQNPRAYDAEPHGLRCASSF 431
Query: 416 FMGLGR------KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDI 469
F+GL + + +FD+R T +EF V+ Y W+ G+++ V H+R +D+
Sbjct: 432 FVGLSKPQQQRQQPSPPQGQQPQFDLRATADEFLQD-VYTYRFWRPGLELAVKHVRRKDL 490
Query: 470 PDFVFPGGVRPPKSLNEKKRKR 491
P +V +R P +++E KRKR
Sbjct: 491 PPYVM-HKIRGP-NIHELKRKR 510
>gi|414585702|tpg|DAA36273.1| TPA: hypothetical protein ZEAMMB73_834827 [Zea mays]
Length = 552
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/502 (47%), Positives = 316/502 (62%), Gaps = 20/502 (3%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS PT D+ +T +LEK+L + ++ S EES R EVL L GIV W+K++ +
Sbjct: 11 EPISLVGPTPADIEATAQLEKLLREAGMYESAEESAVRAEVLRDLQGIVDLWVKQLMLKH 70
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G D + EA A + FGSYRLGV G +DIDAL VGP + R DFFG L +L ET
Sbjct: 71 GYPDA-MVDEATAFVLPFGSYRLGVLGGGSDIDALVVGPSFVDRDQDFFGVLAGVLAETE 129
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVP A VPV+K +F GV VDL+YA + V+P +LD +L LD T S+
Sbjct: 130 AVTELHPVPGAHVPVMKLRFRGVQVDLVYASVNLPVVPRNLDLSDRHVLRGLDHVTARSM 189
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RV D I+ LVP+ FR+TLRC++ WAK RG+YSN GFLGG+ WA+LVARVCQLYP
Sbjct: 190 NGVRVADEIVRLVPDAAAFRTTLRCVKLWAKSRGVYSNVSGFLGGVAWAILVARVCQLYP 249
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQ---AMPHHVWDPRSNQRDRKHLMPIITP 298
NA+P++LVSRFFK+F+HW+WP PVMLC I++ +P VWD R N DR HLMP+ITP
Sbjct: 250 NAVPSMLVSRFFKVFSHWRWPIPVMLCDIEHDDELGLP--VWDVRRNLPDRSHLMPVITP 307
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEA-GKRTWITLFEPYHFFGSFKNYLQI 357
+YPC N +YNVS T R+++E+ Q C++I A G R W LF+P FF + K+YLQ+
Sbjct: 308 AYPCMNCTYNVSRATHRVIKEQIQAGDVACQKIAAGGGRDWGALFQPSPFFSTHKSYLQV 367
Query: 358 HIA-AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYF 416
A A A + R+WKGWVESRLRQL+ +ERD G L C P + +F
Sbjct: 368 DAAVAGGAEELREWKGWVESRLRQLVAKVERDTFGELLCHQNPRAYDAEPHGLRRASSFF 427
Query: 417 MGLGRKQ---GVSPQDGEK--FDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPD 471
+GL + Q P +G FD+R TV EF+ V+ Y W+ G+++ V H+R +P
Sbjct: 428 VGLSKPQQQHKPHPPEGYPPFFDLRATVLEFQQD-VYSYKFWRPGLELVVKHVRRNKLPA 486
Query: 472 FVFP--GGVRPPKSLNEKKRKR 491
+V GG ++++E KRKR
Sbjct: 487 YVMQKIGG----RNIHELKRKR 504
>gi|57834146|emb|CAE04327.2| OSJNBb0016D16.18 [Oryza sativa Japonica Group]
Length = 556
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/506 (46%), Positives = 314/506 (62%), Gaps = 16/506 (3%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS PT D+ ST LE++L +E L+ S EE+ R EVL L G+V W+KR+T +
Sbjct: 13 EPISLVGPTPADLESTARLERLLREEGLYESAEETAAREEVLRGLRGVVDRWVKRLTRQR 72
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G D A A + FGSYRLGV G +DIDAL VGP Y DFFG L L ET
Sbjct: 73 GYPDG-MADRATALVLPFGSYRLGVHGRGSDIDALVVGPSYVDCDRDFFGALATALAETA 131
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVP A VPVIK +F+GV VDL+YA + V+P DLD S+L LD T SL
Sbjct: 132 AVAELQPVPGAHVPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVLRGLDLATARSL 191
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RV D IL LVP+ FR+TLRC++ WAK RG+YSN GFLGG+ WA+LVA VC LYP
Sbjct: 192 NGVRVADEILRLVPDATAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWAILVACVCLLYP 251
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQ----AMPHHVWDPRSNQRDRKHLMPIIT 297
NA P++L+ RFF++FA WKWP+PVML I++ + VWDPR N RD+ HLMPI+T
Sbjct: 252 NASPSMLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNPRDKIHLMPIVT 311
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEI---EAGKRTWITLFEPYHFFGSFKNY 354
P+YPC NS YNVS TLR++ E+ +C+EI +G W LF+P++FFG++K+Y
Sbjct: 312 PAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQPFNFFGAYKSY 371
Query: 355 LQIHIAAKNA--GDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFS----ENSVK 408
LQ+ + D R+WKGWVESRLR L +E D G+L C L+P ++ +
Sbjct: 372 LQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPYAAEPHNEPRR 431
Query: 409 SSSQCHYFMGLGRKQGVSPQDGEK-FDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQ 467
+F+GL + Q + FD+R T E FK V+MY W+ GM++ V+H+R +
Sbjct: 432 RRRTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEE-VYMYDYWRPGMEVAVAHVRRK 490
Query: 468 DIPDFVFPGGVRPPKSLNEKKRKRIE 493
D+P +V +R P ++ KRKR +
Sbjct: 491 DLPSYVLRQLLRSPGRHDQLKRKRAD 516
>gi|66806183|ref|XP_636814.1| poly polymerase [Dictyostelium discoideum AX4]
gi|74852689|sp|Q54J73.1|PAP_DICDI RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|60465216|gb|EAL63311.1| poly polymerase [Dictyostelium discoideum AX4]
Length = 809
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/513 (44%), Positives = 320/513 (62%), Gaps = 14/513 (2%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IST+ P+ +D + ELE L+ LF S EES R E+LG+L+ IV++W K+V++ K
Sbjct: 57 EPISTAPPSSIDFKLSTELENTLISFNLFESPEESRKREEILGKLNQIVREWAKQVSLKK 116
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G E+ E AK+FTFGSYRLGV GP +DID LCVGP + R DFF L +L+ P
Sbjct: 117 GYP-EQTASEVVAKIFTFGSYRLGVHGPGSDIDTLCVGPKHIMR-SDFFDDLSDILKVHP 174
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQD-SLLHNLDEQTVLS 180
+ + T V DA VPVI F+G+ +DL+YA+L + IPE+L+ L D S L N+DE+++LS
Sbjct: 175 EITEFTTVKDAFVPVITMVFSGIPIDLIYAKLALTAIPEELNDLIDESFLKNIDEKSILS 234
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNGCRVTD+IL LVPNI NFR LRC++ WA RRGIYSN +GFLGG++WALL AR+CQLY
Sbjct: 235 LNGCRVTDQILKLVPNIPNFRMALRCIKLWAIRRGIYSNILGFLGGVSWALLTARICQLY 294
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA-MPHHVWDPRSNQRDRKHLMPIITPS 299
PN+ P+ ++ RFFK++ WKWP P++LC IQ + VW+P+ RD+ HLMPIITP+
Sbjct: 295 PNSAPSTIIHRFFKVYEIWKWPAPILLCHIQEGGILGPKVWNPK---RDKAHLMPIITPA 351
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
YP NS+YNVS +TL++M+ EF R E+ +IE G+ TW L E FF + Y++I
Sbjct: 352 YPSMNSTYNVSKSTLQLMKSEFVRGAEITRKIETGECTWKNLLEKCDFFTRYSFYIEIDC 411
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQ----CHY 415
+ N D R+W+GW+ES+LR LI +E YP F+ N K+++ +
Sbjct: 412 YSMNEEDSRKWEGWIESKLRFLISNLESTPKMKFAVP-YPKGFTNNLHKANNPDQICTSF 470
Query: 416 FMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVV-WMYSSWK-QGMQIHVSHLRCQDIPDFV 473
FMGL +P + D+ V EF + W+ + M I V +++ + +P FV
Sbjct: 471 FMGLSFNFSNTPGADKSVDLTKAVTEFTGIIKDWLRTQPNPDTMDIKVQYIKKKQLPAFV 530
Query: 474 FPGGVRPPKSLNEKKRKRIEVIESTKLKKSESS 506
G P +K+ E + K KSE+S
Sbjct: 531 KDEGPEEPVKTTKKRSSTGEPSATRKKLKSENS 563
>gi|413926073|gb|AFW66005.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 375
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 196/326 (60%), Positives = 249/326 (76%), Gaps = 1/326 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + PT+ D+ T ELEK LV+ L+ +EES R +VL + IVK+W+K++T KG
Sbjct: 26 LSLAGPTLADLQRTAELEKFLVEAGLYEGKEESAKREDVLSEIGLIVKEWVKQLTRKKGY 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ E+ +++ANA LFTFGSYRLGV GP DID LCVGP Y R +DFF L +L E V
Sbjct: 86 A-EQLVEQANAILFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFVTLHGILAEKEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF G+S+DLLYA + SVIP D D Q S+L ++DE TV SLNG
Sbjct: 145 AELQPVPDAHVPVLKFKFRGISIDLLYASISLSVIPADFDISQGSVLCDVDEATVRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN+ NFR+TLRCL++WAKRRG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 205 CRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALLVARVCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+P++LVSRFF++F W+WPNPVMLC I+ + +WDPR N RDR HLMPIITP+YPC
Sbjct: 265 VPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPIITPAYPCM 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCE 329
NSSYNVS++TLR++ E+FQ ++C+
Sbjct: 325 NSSYNVSTSTLRVIMEQFQFGNKVCQ 350
>gi|384247369|gb|EIE20856.1| Poly(A) polymerase, partial [Coccomyxa subellipsoidea C-169]
Length = 504
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/515 (45%), Positives = 313/515 (60%), Gaps = 53/515 (10%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E S + PT D T +LE L ++ L+ S EE++ R EVLGRLD +VK+W++RV
Sbjct: 1 EPFSRAPPTTKDFQQTADLELCLREQGLYESNEEAVLREEVLGRLDRLVKEWVQRVCAWL 60
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGK----LFRML 117
G+ + ++ E NAK+FTFGSYRLGV GP DID LCVGP + +R FFG L +ML
Sbjct: 61 GLGEFGEV-ETNAKIFTFGSYRLGVHGPGADIDTLCVGPRHVSRDLHFFGTEEHCLQKML 119
Query: 118 QETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQT 177
+ P V +L PV D+ VPVIK KF+GVS+DLLYAQL +V+PE+LD S L N D+++
Sbjct: 120 SDLPEVTELQPVVDSFVPVIKMKFSGVSIDLLYAQLATAVVPENLDVGAISTLRNADDKS 179
Query: 178 VLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVC 237
V SLNGCRVTD +L+ V +I FR+ LR ++ WA+RRGIYSN +G+LGG+NWA+LVA C
Sbjct: 180 VRSLNGCRVTDTLLNQVESIETFRTALRVIKLWAERRGIYSNVVGYLGGVNWAILVAYTC 239
Query: 238 QLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIIT 297
+LYP + +V+V RFFK+FA W WP P+ML I++ AM VWDPR N RD HLMPIIT
Sbjct: 240 KLYPCGIASVIVDRFFKVFARWPWPTPIMLREIEHDAMGLQVWDPRINPRDSMHLMPIIT 299
Query: 298 PSYPCTNSSYNVSSTTLRIM------------QEEFQRAKELCEEI--EAGKRTWITLFE 343
P+YP NSSYNVS +TL M QEEF+ +++C I E G W L E
Sbjct: 300 PAYPAANSSYNVSESTLAAMKARTQLHQTCLLQEEFEHGEKVCTRILAEGGLTKWHKLLE 359
Query: 344 PYHFFGSFKNYLQ------------------IHIAAKNAGDFRQWKGWVESRLRQLIHMI 385
P FF +++NYLQ +H + A W GWV SRLRQL+ +
Sbjct: 360 PVPFFRNYRNYLQARLFLTPSQFIPFATCCFMHCILQEA-----WDGWVHSRLRQLVMRV 414
Query: 386 ERDMGGVLQCRLYP-GDFSENSVKSSSQ---CHYFMGLGRKQGVSPQDGEKFDMRLT--V 439
E + R +P F +++ Q C YFMGL +K S G + L V
Sbjct: 415 E----PFVTVRPWPKAIFPPRGPEAAGQPRRCFYFMGLKKKPLPSQPGGRASSVNLNNPV 470
Query: 440 EEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVF 474
+EFK+ V+ Y SWK+GM + ++H + +P FV
Sbjct: 471 QEFKNQVM-GYLSWKEGMHVLITHQMQKALPSFVL 504
>gi|452825557|gb|EME32553.1| poly(A) polymerase [Galdieria sulphuraria]
Length = 584
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/547 (42%), Positives = 325/547 (59%), Gaps = 74/547 (13%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IST+ PT LD ++ELE+ L + L+ + +E+ R +VL L ++ +W++RV+ +
Sbjct: 19 EPISTATPTPLDYRLSRELEEFLHNRNLYENNKEAQRREQVLAELHQLINEWVRRVSRSQ 78
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFG---------- 111
GI+ EE + E AKLFTFGSYRLGV P+ DID LC+ P Y R+ D FG
Sbjct: 79 GIA-EEIVSETEAKLFTFGSYRLGVNPPNADIDTLCIVPRYVERNRDVFGIPSESGSVPE 137
Query: 112 ---KLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDS 168
L + + P +ED+ PV DA VPV+KFKF GV +DLL A+LQFS +PE LD L DS
Sbjct: 138 EENVLVNIFKSHPKIEDVVPVFDAHVPVVKFKFAGVEIDLLCARLQFSKLPERLDILDDS 197
Query: 169 LLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGIN 228
+L N+D++T S+NG RVTD IL LVPN+ FR+TLR ++FWAK RGIYSN +GFLGG++
Sbjct: 198 ILRNVDDETQRSVNGVRVTDAILRLVPNVETFRTTLRAVKFWAKNRGIYSNVLGFLGGVS 257
Query: 229 WALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQ--YQAMPHHVWDPRSNQ 286
WA+LVAR+CQLYP+A NV++SRFF++++ WKWPNPV+L I + VW+P
Sbjct: 258 WAILVARICQLYPHAAANVILSRFFRVYSQWKWPNPVLLTSISPGKPSCGFKVWNPAVFP 317
Query: 287 RDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEI--------------- 331
DRKHLMP+ITP+YP NS++NVS TTLRI+QEE R E+ ++I
Sbjct: 318 ADRKHLMPVITPAYPSMNSTHNVSRTTLRIIQEEIHRGLEITDKILCQSNSSRKTISTED 377
Query: 332 -------------------EAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKG 372
E TW LFE FF FKNYLQI++ + A + R+W G
Sbjct: 378 TENDQTTQVEHSEETNLVKETEVMTWSKLFERTDFFSKFKNYLQINVISGTAENQRKWHG 437
Query: 373 WVESRLRQLIHMIERDMGGVLQCRL---YPGDFSENSVKSSSQCHYFMGLGRKQGVSP-Q 428
+VES+LR L +E +L L YP ++ V+ +F+GL P Q
Sbjct: 438 FVESKLRVLTLKLE-----ILSHTLIYPYPVPYTRPGVQFCES--FFIGLSFSLPKLPNQ 490
Query: 429 DG---EKFDMRLTVEEFKSHVV-WMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKSL 484
+G K DM V E+ ++V+ W + + M++ V H++ + +P++VF K
Sbjct: 491 NGSKERKIDMSGPVSEWVNYVLSWPFRT--SDMEVSVEHVKRKFLPEYVF-------KDE 541
Query: 485 NEKKRKR 491
N + RKR
Sbjct: 542 NHRSRKR 548
>gi|307107277|gb|EFN55520.1| hypothetical protein CHLNCDRAFT_23208 [Chlorella variabilis]
Length = 632
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/492 (46%), Positives = 307/492 (62%), Gaps = 28/492 (5%)
Query: 1 MEIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMD 60
+E IS + PT D+ T++LE+ L D+ L+ S+EE+ R VLGRLDG+VK+WI+ V
Sbjct: 8 VEPISQAEPTPQDLKHTRDLEQHLRDQGLYESQEEAELREVVLGRLDGLVKEWIRGVAAL 67
Query: 61 KGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGK----LFRM 116
+G E+ ANAK+FTFGSYRLGV GP DID LCVGP YATR DFFG L M
Sbjct: 68 RGHPPED----ANAKIFTFGSYRLGVHGPGADIDTLCVGPSYATREGDFFGSEPHCLQAM 123
Query: 117 LQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQ 176
L P V L V A VPV++ KF G+S+DLLYA+L ++ EDLD L + D+Q
Sbjct: 124 LCALPEVLALRAVTAAYVPVMEMKFCGISIDLLYARLSVPLVREDLDIGATHTLRHCDDQ 183
Query: 177 TVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARV 236
+V SLNGCRVTD IL VP++ +FR+ LRCL+ WA+RRG+YSN G+LGG+NWA+LVA V
Sbjct: 184 SVRSLNGCRVTDMILREVPSVPHFRTALRCLKLWAERRGVYSNVTGYLGGVNWAILVAYV 243
Query: 237 CQLYPNAL---PNVLVSRFF---KIFAHWKWPNPVMLCPIQYQ---AMPHHVWDPRSNQR 287
C+L P L P++ + ++++ W WP P+ML I+ AMP VWDPR N R
Sbjct: 244 CKLQPCLLASPPHLGPAPCLPVPQVYSQWAWPTPIMLRAIERDPSLAMP--VWDPRENPR 301
Query: 288 DRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEI----EAGKRTWITLFE 343
DR HLMPIITP+YPC NSSYNVS TL +M EEF+R E+C I +G W L E
Sbjct: 302 DRTHLMPIITPAYPCMNSSYNVSECTLAVMAEEFRRGDEVCGRIMTHNGSGLTDWAQLLE 361
Query: 344 PYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHM-IERDMGGVLQCRLYPGDF 402
P FF FK++LQ+ + A + DF W+GWV SR+R LI + ++ Q G
Sbjct: 362 PLPFFEGFKHFLQVEVMASSQEDFEVWEGWVHSRMRLLIKVDQQQQQQQQQQDGGGGGSV 421
Query: 403 SENSVKSSSQCHYFMGLGRKQG-VSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHV 461
++ + +C YFMGL +K+ + PQ K D+ V EF +H V + ++GM I V
Sbjct: 422 ADPPAQQQPRCFYFMGLSKKKAMIIPQS--KVDLTQPVNEF-AHKVKEFEQRREGMDISV 478
Query: 462 SHLRCQDIPDFV 473
HL + +P++V
Sbjct: 479 RHLLQRQLPEWV 490
>gi|294460282|gb|ADE75723.1| unknown [Picea sitchensis]
Length = 554
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/471 (45%), Positives = 300/471 (63%), Gaps = 27/471 (5%)
Query: 8 APTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEE 67
+PT +D+ T LEK +D +L +E+E R VL +L+ IVK W +RVT +G+ +
Sbjct: 51 SPTDIDIARTHALEKFQIDAELILTEKEEAKRRSVLAQLEQIVKRWARRVTWQRGLPKDL 110
Query: 68 QIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLT 127
+ + +NAK+FTFGSY+LGV GP DIDALCVGPCYAT DDFF L+ ML++T V ++
Sbjct: 111 K-ESSNAKIFTFGSYQLGVHGPEADIDALCVGPCYATLEDDFFIVLYNMLKKTAEVSEVQ 169
Query: 128 PVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVT 187
V A VP+++FKF+G+S+DLLYA+L IPED+D L + LL NLD+ TV SLNGCRVT
Sbjct: 170 CVKSANVPLMRFKFSGISIDLLYARLSLRTIPEDMDILDEKLLENLDDTTVKSLNGCRVT 229
Query: 188 DRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV 247
RIL LVP I NFRSTLRC++FWAKRRGIYS+ GFLGGI+WA+LVARVCQ++PNA ++
Sbjct: 230 ARILQLVPKIENFRSTLRCIKFWAKRRGIYSHIFGFLGGIHWAVLVARVCQMFPNATVSM 289
Query: 248 LVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSY 307
LVSRFF I+AHW+WP PV L Q P H ++ DR H MPII P +P + SY
Sbjct: 290 LVSRFFWIYAHWQWPTPVTLVETQ----PDH-----ADGSDRHHHMPIIIPVHPYSCCSY 340
Query: 308 NVSSTTLRIMQEEFQRAKELCEEIEAGKRT------WITLFEPYHFFGSFKNYLQIHIAA 361
NV+ +TL+ ++ EF R + ++E T W LFE + F S++ ++QI++ A
Sbjct: 341 NVTRSTLQKLKSEFSRGWDAIMKMETKWGTLPNSGDWNILFERFPFCSSYEYFIQIYVTA 400
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
+ DFR W+GWVESR R L+ E+ C P + + +VK C++ GL
Sbjct: 401 SDEDDFRSWRGWVESRFRHLLLKFEKLPA---YCDPNPYPYFDKNVK-EPHCYFLWGLKL 456
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDF 472
++ +S DM +EF+ ++ Y + G +H++ L +P F
Sbjct: 457 RKNIS------VDMADLEDEFRLYLSNGYEG-RPGCDVHLTLLNRFQLPSF 500
>gi|270004464|gb|EFA00912.1| hypothetical protein TcasGA2_TC003818 [Tribolium castaneum]
Length = 565
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/479 (43%), Positives = 308/479 (64%), Gaps = 7/479 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ P D++ T+ELE+ L +F SE+E R+ +LG+L +VK WIK V++ K +
Sbjct: 35 ISTAPPKPSDLLKTQELEEALKPFGVFESEQELNHRMVILGKLYSLVKQWIKDVSISKNM 94
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E + K++TFGSYRLGV DIDALCV P + +R +DFFG + +L++ P V
Sbjct: 95 P-ESVAENVGGKIYTFGSYRLGVHNRGADIDALCVAPRHISR-NDFFGSFYELLKKQPEV 152
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
DL V +A VPVIK F+G+ +D+L+A+L IP+ +D D LL NLD++ V SLNG
Sbjct: 153 TDLRAVEEAFVPVIKMNFDGIEIDMLFARLLLKEIPDSMDLRDDLLLKNLDQKCVRSLNG 212
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN+ NFR LR ++ WAKR GIYSNA+G+LGG++WA+LVAR CQLYPNA
Sbjct: 213 CRVTDEILRLVPNVDNFRLALRAIKLWAKRHGIYSNALGYLGGVSWAMLVARTCQLYPNA 272
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
P LV +FF +F+ WKWP PV+L + VWDPR N +DR HLMPIITP+YP
Sbjct: 273 APATLVHKFFLVFSQWKWPQPVLLKQPSNVNLGFAVWDPRVNIQDRYHLMPIITPAYPQQ 332
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T +I+ EEF+ +L ++I K+TW LFEP FF +K+++ + ++A++
Sbjct: 333 NSTFNVSGSTRQIIMEEFKLGLQLTDDIMLSKQTWDKLFEPPLFFMKYKHFIVLLVSAES 392
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFS--ENSVKSSSQCH-YFMGLG 420
D +W G VES+ R LI +ER+ L + P FS E+ +S++ C +F+GL
Sbjct: 393 PEDHLEWCGLVESKFRLLIGTLERNQHITL-AHINPESFSLLESQRESNTHCSMWFIGLE 451
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVR 479
+ + FD++ E ++H + + S K+GM++ H++ + + ++ P ++
Sbjct: 452 FAKSENLNVNLTFDIQQFTETVQNHALNI-SMLKEGMKLEARHVKRKQLYQYLSPSLLK 509
>gi|290990211|ref|XP_002677730.1| predicted protein [Naegleria gruberi]
gi|284091339|gb|EFC44986.1| predicted protein [Naegleria gruberi]
Length = 559
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/474 (43%), Positives = 302/474 (63%), Gaps = 10/474 (2%)
Query: 3 IISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKG 62
+IS + PT D+ +++ + +IL E F S+EE+ R EVL +LDGI+K W+K+V + +G
Sbjct: 6 VISAALPTQKDLTNSEAIMEILKKENRFPSDEENKKREEVLAKLDGIIKGWVKQVCLKQG 65
Query: 63 ISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL 122
+S EE + A +KL TFGS+RLGV GP DID LC+ P +H F L +L+ P
Sbjct: 66 LS-EEFVSSAGSKLVTFGSFRLGVHGPGADIDTLCIVPNMVEKHH-CFTDLHDILKLRPE 123
Query: 123 VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLN 182
+ +L PVPDA VP+I F+GV +DLL+A+L +VIP DLD L +S L + D++T SLN
Sbjct: 124 IAELKPVPDAYVPLITMVFDGVEIDLLFARLSRTVIPADLDILDESNLKDADDETQRSLN 183
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
G RV D+IL LVPN NFR+TLRC++ WA RR IY N +G+LGG+ +A+L A++CQ+YPN
Sbjct: 184 GPRVADQILKLVPNQENFRTTLRCIKLWATRRAIYGNIVGYLGGVAYAILTAKICQMYPN 243
Query: 243 ALPNVLVSRFFKIFAHWKWPN-PVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
A P+ L+++FF ++ W W PV+L PI+ + VW+P+ N RD++HLMPIITPSYP
Sbjct: 244 AAPSTLLTKFFTVYQQWNWGKVPVLLRPIEEGTLNFKVWNPKLNPRDKQHLMPIITPSYP 303
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
C NS++NVS TTL+ M+ EF+R + ++ E G W TLFE FF + NYLQ+ I
Sbjct: 304 CMNSTFNVSKTTLKDMKNEFERGASITQKAENGLENWETLFEATDFFVRYSNYLQVEINT 363
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
N D +W G+++S++R LI +E G L +YP D+ N+ + ++++GL
Sbjct: 364 SNEVDHLKWIGFIQSKVRFLIPKLEAVPG--LTIHIYP-DYFHNNQGGAFSSYFYIGLEY 420
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQI-HVSHLRCQDIPDFVF 474
KQ P +G ++ + EF+ + W + M+ + ++ IP+FV
Sbjct: 421 KQ-TKPGEGSVVNLASCIAEFEELLTW--PDKNENMEKPKIQPIKRNAIPEFVI 471
>gi|281200800|gb|EFA75017.1| polyA polymerase [Polysphondylium pallidum PN500]
Length = 757
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/493 (41%), Positives = 311/493 (63%), Gaps = 30/493 (6%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS S PT D+ + ELE L LF + EES + E+LG+L+ IV+ W+ V++ +G
Sbjct: 33 ISFSNPTPADLKLSTELEDTLKSFNLFETPEESGKKEEILGKLNLIVRKWVIDVSLKRGF 92
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+++ + E AK+FTFGSYRLGV+GPS+DID LCV P + R D FF L L+ P +
Sbjct: 93 TEQMSL-EVVAKIFTFGSYRLGVSGPSSDIDTLCVAPKHIMRSD-FFDFLGEALKVHPDI 150
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSL-QDSLLHNLDEQTVLSLN 182
+L V DA VPVI F+G+++DL++A+L S I ED++ L D+ L NLD+Q++ SLN
Sbjct: 151 TELNMVKDAYVPVITMIFSGIAIDLIFARLSLSSISEDMNDLIDDAYLKNLDDQSITSLN 210
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
GCRVTD+IL+LVP+ FR LR ++ WA+RRGIYSN +GFLGG++WALL AR+CQLYPN
Sbjct: 211 GCRVTDKILTLVPSRATFRMALRFIKLWAQRRGIYSNVLGFLGGVSWALLTARICQLYPN 270
Query: 243 ALPNVLVSRFFKIFAHWKW----PNPVMLCPIQYQAM-PHHVWDPRSNQRDRKHLMPIIT 297
A P+ +++RFFKI+ W+W P PV+LCPIQ + VW+ +RD+ HLMPI+T
Sbjct: 271 AAPSTIINRFFKIYETWRWGVPGPTPVLLCPIQDGGIFAAKVWN---QKRDKSHLMPILT 327
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQI 357
P+YP NS+YNVS +TL ++++EF R ++ +++E+G+ W L E FF ++ YLQI
Sbjct: 328 PAYPSMNSTYNVSKSTLSLLKDEFARGNQIAQKLESGEANWNKLLEKSDFFSRYQFYLQI 387
Query: 358 HIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSE------------- 404
+A+N + R+W+GW+ES+LR+LI +E+ +P F
Sbjct: 388 DCSAQNEEEHRKWEGWIESKLRKLISFLEQTPKMKFAIP-FPKSFENKPTPAATTTAANG 446
Query: 405 ---NSVKSSSQC-HYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIH 460
+S+ C +FMGLG +P + D+ V +F +H++ ++ M++
Sbjct: 447 EAVTDANNSNVCTSFFMGLGFNFSNAPGADKSVDITKAVIDF-THLIKDWAGKGPTMEMK 505
Query: 461 VSHLRCQDIPDFV 473
V +++ + +P FV
Sbjct: 506 VHYIKRRQLPAFV 518
>gi|13365529|dbj|BAB39138.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/563 (39%), Positives = 325/563 (57%), Gaps = 21/563 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + + +F SE+E R+ VLG+L+ VK+WI ++ K +
Sbjct: 27 ISLAFPREIDHIYTQKLTEAMKPFGVFESEDELNHRLAVLGKLNSFVKEWIAEISESKNL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 87 P-LSAVVNVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-TDFFSSFFEKLKRLDEI 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V DA VPVIKFKF+G+ +DLL+A+L IP++LD DSLL NLD + + SLNG
Sbjct: 145 KDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN NFR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 265 VAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T IM EEF+ + +EI GK W LFEP +FF +K+Y+ + +A
Sbjct: 325 NSTYNVSTSTRTIMSEEFKNGLTVTDEILQGKADWSKLFEPPNFFQKYKHYIVLTASAST 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG EN ++ +F+G+
Sbjct: 385 EENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGS-KENHNENEFVSMWFIGIS 443
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
K+ + D D+ ++ F V S+ K GM I +H++ + + ++
Sbjct: 444 FKK-LDNSDCVNIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHVKKKQLHHYL---- 498
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSV 537
PP+ + KK+ ++ S+ S+ + S S T+ G P
Sbjct: 499 --PPELVQRKKKSLGDINRSSNGGGSKRCSLDGSQLDSSRDTDIGTPFSS-----PTPVS 551
Query: 538 EPSTSSVSSSTSASSRPQRPAVS 560
+PS + + S+ S P+ P ++
Sbjct: 552 KPSQPASTPEDSSISPPKHPVLA 574
>gi|330796347|ref|XP_003286229.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
gi|325083816|gb|EGC37259.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
Length = 671
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/483 (43%), Positives = 303/483 (62%), Gaps = 28/483 (5%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E ISTS P+ LD+ + +LE L+ LF S EES R EVLG+L+ IV++W K+V++ K
Sbjct: 50 EPISTSPPSALDLKLSNDLENTLISFNLFESPEESRKREEVLGKLNQIVREWAKQVSIKK 109
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G E+ E AK+FTFGSYRLGV GP++DID LCVGP + R DFF L L+ P
Sbjct: 110 GYP-EQTAAEVVAKIFTFGSYRLGVHGPNSDIDTLCVGPKHIMR-SDFFDDLSESLKTHP 167
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQD-SLLHNLDEQTVLS 180
+ + T V DA VPVI F+GV +DL+YA+L + IPE+L+ L D L N+DE+++LS
Sbjct: 168 EITEFTTVKDAFVPVINMVFSGVPIDLIYARLSLTAIPEELNDLIDEGYLKNVDEKSILS 227
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNGCRV D+IL LVPNI NFR LRC++ WA + FLGGI WALL AR+CQLY
Sbjct: 228 LNGCRVADQILKLVPNIPNFRMALRCIKLWA---------ISFLGGITWALLTARICQLY 278
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCP-IQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
PN+ P+ +++RFFK++ +WKWP PV+L ++ A+ VW+ + RD+ HLMPI+TP+
Sbjct: 279 PNSAPSTIINRFFKVYENWKWPAPVLLTHLVEGGALAAKVWNAK---RDKAHLMPILTPA 335
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
YP NS+YNVS +T+++++ EF R E+ +IE + T+ L E FF ++ Y+QI
Sbjct: 336 YPMMNSTYNVSKSTMQLLKNEFVRGAEITRKIETNESTYNALLEKSDFFTRYRFYIQIDC 395
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRL-YPGDFSENSVKSSSQ-----C 413
+A N D R+W+GW+ES+LR LI +E M ++ + +P FS N + S
Sbjct: 396 SAGNEEDHRKWEGWIESKLRFLISNLE--MTPKMKYAVPFPKSFS-NLIHKESHPDQICT 452
Query: 414 HYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVV-WMYS--SWKQGMQIHVSHLRCQDIP 470
+FMGL +P + D+ V EF S + W+ + + + I V +++ + +P
Sbjct: 453 TFFMGLVFNFPTTPGADKSVDLTKAVSEFTSTIKEWLRTQPNPETMADIKVQYIKKKQLP 512
Query: 471 DFV 473
F+
Sbjct: 513 SFI 515
>gi|432902553|ref|XP_004077012.1| PREDICTED: poly(A) polymerase gamma-like [Oryzias latipes]
Length = 834
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/526 (41%), Positives = 311/526 (59%), Gaps = 16/526 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D T++L + + +F EEE R+ VLG+L+ VK+WI ++ K +
Sbjct: 26 ISLAPPREIDHEYTRKLCEAMQPFGVFEDEEELNHRLAVLGKLNNFVKEWIAEISELKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
I K+FTFGSYRLGV DIDALCV P + R DFF F L++ +
Sbjct: 86 P-PSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFQSFFEKLKQHEEI 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V DA VPVIKFKF+G+ +DLL+A+L IP++LD DS+L NLD + + SLNG
Sbjct: 144 KDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSILKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN NFR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 VAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T IM EEF+ + +EI GK W LFEP FF +K+Y+ + +A
Sbjct: 324 NSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKAEWPKLFEPPSFFQKYKHYIVLTASAST 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG EN ++ C +F+G+
Sbjct: 384 EENHLEWVGLVESKIRVLVGNLERNEYITLAHVNPQSFPGS-KENRSENDFVCMWFIGII 442
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
K+ V + D+ ++ F V ++ K GM+I +H++ + + ++
Sbjct: 443 FKK-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHQYL---- 497
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGV 523
PP+ + KKR EV + + + +S S T+SG
Sbjct: 498 --PPELVQRKKRSIAEVNRGSNGGNPKRLSLDNSHLDSSRDTDSGT 541
>gi|41054866|ref|NP_956915.1| poly(A) polymerase gamma [Danio rerio]
gi|34783795|gb|AAH56818.1| Poly(A) polymerase gamma [Danio rerio]
Length = 744
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/562 (39%), Positives = 323/562 (57%), Gaps = 21/562 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + + +F E+E R+ VLG+L+ VK+WI ++ K +
Sbjct: 27 ISLAFPREIDHIYTQKLTEAMKPFGVFEGEDELNHRLAVLGKLNSFVKEWISEISESKNL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 87 P-PSAVANVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-TDFFSSFFEKLKRHDEI 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V DA VPVIKFKF+G+ +DLL+A+L IP++LD DSLL NLD + + SLNG
Sbjct: 145 KDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN NFR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 265 VAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T IM EEF+ + +EI GK W LFEP +FF +++Y+ + +A
Sbjct: 325 NSTYNVSTSTRTIMNEEFKNGLTVTDEILQGKADWSKLFEPPNFFQQYRHYIVLTASAST 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG EN ++ +F+G+
Sbjct: 385 EENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGS-KENRNENDFVSMWFIGIS 443
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
K+ + D D+ ++ F V S+ K GM I +H++ + + ++
Sbjct: 444 FKK-LDNSDCVNIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHVKKKQLHHYL---- 498
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSV 537
PP+ + KK+ ++ S+ S+ + S S T+ G P
Sbjct: 499 --PPELVQRKKKSLGDINRSSNGGGSKRCSLDSSQLDSSRDTDIGTPFSS-----PTPIS 551
Query: 538 EPSTSSVSSSTSASSRPQRPAV 559
+P + + ++SS PQ P +
Sbjct: 552 KPCQPASTPEDNSSSPPQHPVL 573
>gi|405945155|gb|EKC17170.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 745
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/567 (38%), Positives = 330/567 (58%), Gaps = 21/567 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS P +D+ +++LE+ + +F SEEE R++VL +++ +V++WIK V+ K
Sbjct: 23 ISLEGPKPVDLKLSEKLEEAMRPHGVFESEEEMSHRMDVLHKINTLVREWIKDVSRQKNN 82
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E++I K+ TFGSYRLGV DID LCV P + R DFF F +L+ TP V
Sbjct: 83 YPEDKIDAFGGKVCTFGSYRLGVHTKGADIDTLCVAPRHVDR-SDFFSSFFEILKNTPEV 141
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPE++D +SLL NL+E+ V SLNG
Sbjct: 142 KDLRAVEEAFVPVIKMTFDGIELDMLFARLALPQIPEEIDLRDESLLKNLNEKCVRSLNG 201
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN +FR TLR ++ WAK++GIYSNA+GFLGG++WA+LVARVCQLYPNA
Sbjct: 202 CRVTDEILHLVPNQHSFRMTLRAIKLWAKKKGIYSNALGFLGGVSWAMLVARVCQLYPNA 261
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQ---AMPHHVWDPRSNQRDRKHLMPIITPSY 300
P L+ +FF I W WP PV+L + ++ + VWDPR N DR HLMPIITP+Y
Sbjct: 262 APATLLHKFFMIIHKWNWPQPVLLKALVHENKFNLSFPVWDPRVNTSDRFHLMPIITPAY 321
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIA 360
P NS++NV+ +T IM EE + E+ +I G+ W LFEP +FF +K+Y+ + +
Sbjct: 322 PQQNSTFNVTLSTRSIMTEELKDGLEIVSKIYEGREEWGALFEPSNFFQKYKHYIVLTAS 381
Query: 361 AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSE-NSVKSSSQCHYFMGL 419
A D+ +W G+VES++R L+ +ER+ + ++P N C +F+GL
Sbjct: 382 AVEEKDYLEWHGYVESKIRLLVGNLERN-PCIKLAHVHPSPLGPLNESDGEYLCRWFIGL 440
Query: 420 GRKQGVSPQDGEKFDMRLTVEEFKSHV---VWMYSSWKQGMQIHVSHLRCQDIPDFVFPG 476
+ + Q+ + D+ ++ F + V + + K GM++ + H++ + + +V
Sbjct: 441 TFVK-IENQN-QNVDLTFDIQSFTNTVHKHAYHINLMKDGMKVEIKHVKRRQLDLYV--- 495
Query: 477 GVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPS 536
PPK L + KR + + + + S S + S Q + S L S+ + S
Sbjct: 496 ---PPKILLQSKRAAV----AQEHRSSIGSASKSESNQTLHHSRSDTELVRSNSMSVDLS 548
Query: 537 VEPSTSSVSSSTSASSRPQRPAVSIET 563
E S + SS S S + + S E
Sbjct: 549 EEISQDAESSRDSVKSGSELSSTSKEA 575
>gi|303282577|ref|XP_003060580.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458051|gb|EEH55349.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 656
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/482 (42%), Positives = 290/482 (60%), Gaps = 21/482 (4%)
Query: 12 LDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQE 71
+DV + ELE L E +F S EE R EVLG ++ +++W+K + KGI E+ E
Sbjct: 1 MDVKLSAELEARLHLENVFESPEECARREEVLGEINEALQEWVKAASAAKGI---EEDLE 57
Query: 72 ANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGK--------LFRMLQETPLV 123
L+TFGSYRLGV GP+ DID LC+GP + +R +DFFG + ++ P
Sbjct: 58 PRCNLYTFGSYRLGVHGPAADIDTLCIGPRHLSRSEDFFGSEWTEYEGSFYLAMKNHPGT 117
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDLDSLQDSLLHNLDEQTVLSLN 182
+ + VPDA VP +K F G VD+ Y L F +PEDLD Q S+L NLD+ +V SLN
Sbjct: 118 DRIVAVPDAVVPELKLIFRGFEVDMAYTSLPSFIAVPEDLDVCQTSILQNLDDASVKSLN 177
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
GCRV D++L LVPN +FR LR LR WA+ RG+YSN GF GG+N A+LVARVCQLYPN
Sbjct: 178 GCRVADQLLRLVPNHASFRIALRALRVWARERGVYSNVQGFFGGVNLAILVARVCQLYPN 237
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
A ++LV FF+++ W+W PVML I + VWD R N+ +R LM IITP+YP
Sbjct: 238 AAASMLVYSFFQLWDAWQWTTPVMLTAIIDEGHGLRVWDERVNKAERFQLMKIITPAYPA 297
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK 362
NS++NV+ +TL +++ EF+R +E C +I G+ W +L+EP FF K+YLQ+ + A
Sbjct: 298 QNSTFNVTHSTLHVLKREFKRGRETCAKILMGQTKWESLWEPLPFFTMHKHYLQVTMCAI 357
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRK 422
DF++W+GWV SRLR L+ +E GG L YP + + S+ C Y++GLG
Sbjct: 358 TEDDFKKWEGWVHSRLRMLVQAVETCSGGALIAHPYPERKQDPAKDSALHCIYYIGLGPA 417
Query: 423 QGVSPQDGEK---FDMRLTVEEFKSHVV-WMYSS-----WKQGMQIHVSHLRCQDIPDFV 473
+ ++ VE+F+ V W+ + W+ GM++HV H++ +D+P +
Sbjct: 418 PPPTTGGPAPRGTLNLNPAVEQFQMLVTSWVNRADGTVQWQPGMEVHVKHMKRKDVPAWA 477
Query: 474 FP 475
P
Sbjct: 478 IP 479
>gi|449018860|dbj|BAM82262.1| nuclear poly(A) polymerase [Cyanidioschyzon merolae strain 10D]
Length = 561
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 225/559 (40%), Positives = 325/559 (58%), Gaps = 50/559 (8%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E +ST+ PT ++ T+ LE+ L L+ S EE R+ VLG L+ +V +W++RV + +
Sbjct: 14 EPVSTATPTAAELRLTRTLEECLHANNLYPSREEQRQRLNVLGALNAVVVEWVRRVALAQ 73
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFG---------- 111
+S E+ ++E A++FTFGSYRLGV GP D+D LCV P + R+ FFG
Sbjct: 74 RLS-EDVVEEHGARIFTFGSYRLGVNGPGADVDTLCVVPRFVERNRYFFGLPDEQGSRAP 132
Query: 112 ---KLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDS 168
L ML++ E+L V A VPVIK +F GV +DLL A + IP++ + L D+
Sbjct: 133 TQVVLADMLRQDDRTEELVTVESAYVPVIKIRFMGVDMDLLCAPIALMKIPKNFNILDDA 192
Query: 169 LLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGIN 228
+L N+D+ T SLNG RVTD IL LVP++ FR+TLRC++FWAKRRGIYSN +G+LGG+
Sbjct: 193 VLRNVDDATQRSLNGVRVTDSILELVPDVDTFRTTLRCIKFWAKRRGIYSNVLGYLGGVA 252
Query: 229 WALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPI---QYQAMPH-HVWDPRS 284
WA+LVARVCQLYPNA V++S FF++++ W+WP PV LCPI Q+ + VWDP +
Sbjct: 253 WAMLVARVCQLYPNATAAVVLSAFFRLYSQWQWPKPVKLCPIIRHQHAGLRQLKVWDP-T 311
Query: 285 NQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGK--------- 335
+ RDR+HLMPIITP+YP NS+YNV+ +TLRIM EEF R +++C ++ A
Sbjct: 312 DPRDRRHLMPIITPAYPSMNSTYNVTHSTLRIMMEEFARGQQICADVLAAAGSDGTGVSP 371
Query: 336 RTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVL-Q 394
R W L EP FF +K+YLQI I A N D ++W+G VESRLR L+ +E VL
Sbjct: 372 RDWERLLEPSDFFARYKHYLQIEITAGNMDDLKKWRGHVESRLRLLVQRLE-----VLPP 426
Query: 395 CRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEK---FDMRLTVEEF--------- 442
++P + E + +S YF ++ ++G K D+ VE +
Sbjct: 427 VSVHP--WPEADERGTSVFFYFGLRLETDKIAREEGTKRARIDLNSPVESWLSTPDPRDT 484
Query: 443 KSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKK 502
+S V + M +HV+ L+ +P+ + RP ++ + KK
Sbjct: 485 RSVPVLHWPERTPDMLVHVTPLKRAQLPESLRVQRKRPAET--DPSAAAAPAALQVVTKK 542
Query: 503 SESSTAGHSSGQKSSQTES 521
S S+ G S+ + TE+
Sbjct: 543 SRSTPDGASASLLRAPTET 561
>gi|13365531|dbj|BAB39139.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 226/575 (39%), Positives = 325/575 (56%), Gaps = 22/575 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + + +F E+E R+ VLG+L+ VK+WI ++ K +
Sbjct: 27 ISLAFPREIDHIYTQKLTEAMKPFGVFEGEDELNHRLAVLGKLNSFVKEWIAEISDSKNL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 87 P-PSSVTNVGGKIFTFGSYRLGVHTKGADIDALCVAPRHIER-TDFFSSFFEKLKRHDEI 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V DA VPVIKFKF+G+ +DLL+A+L IP++LD DSLL NLD + + SLNG
Sbjct: 145 KDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN NFR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 265 VAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T IM EEF+ + +EI GK W LFEP +FF +K+Y+ + +A
Sbjct: 325 NSTYNVSTSTRTIMSEEFKNGLTVTDEILQGKADWSKLFEPPNFFQKYKHYIVLTASAST 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG EN ++ +F+G+
Sbjct: 385 EENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGS-KENHNENEFVSMWFIGIS 443
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
K+ + D D+ ++ F V S+ K GM I +H++ + + ++
Sbjct: 444 FKK-LDNSDCVNIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHVKKKQLHHYL---- 498
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSV 537
P L ++K+K + ++ +S + SQ +S D S V
Sbjct: 499 ---PSELVQRKKKSL-----GEINRSSNGGGSKRCSLDGSQLDSSRDTDIGTPFSSPTPV 550
Query: 538 EPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVS 572
VS+ +S P + V + + A+ VS
Sbjct: 551 SKPCQPVSTPEDSSITPPKHPVLVFIDSPTASEVS 585
>gi|332018332|gb|EGI58937.1| Poly(A) polymerase gamma [Acromyrmex echinatior]
Length = 553
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/497 (43%), Positives = 303/497 (60%), Gaps = 21/497 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D+ T EL++ L +F SEEE R+E+L +L+ +VK WI+ ++ + +
Sbjct: 31 ISVAEPKPMDISRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRDTSIARNM 90
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
++ K++TFGSYRLGV DIDALCV P + R D +F F +L+ V
Sbjct: 91 P-PNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRQD-YFTSFFDLLKMQEEV 148
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
DL V +A VPVIK F+G+ +D+L+A+L IP+ +D D LL NLD++ V SLNG
Sbjct: 149 TDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNLDQKCVRSLNG 208
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR LR ++ WAKR GIYSN +G+LGG++WA+LVAR CQLYPNA
Sbjct: 209 CRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNA 268
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ L+ +FF +F+ WKWP PV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 269 VAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVADRYHLMPIITPAYPQQ 328
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T IMQE F+ + EEI GK TW LFEP +FFG +K+Y+ + + +
Sbjct: 329 NSTFNVSVSTRTIMQEAFENGLAITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLAKSLS 388
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCH-YFMGLGR- 421
A D +W G VES++R LI M+ER+ L + P F + +S C +F+GL
Sbjct: 389 AEDQLEWCGLVESKIRHLIGMLERNPHITL-AHVNPEAFPPLNPESGKHCSMWFIGLAFS 447
Query: 422 --KQGVSPQDGEKFDMRLTVEEFKSHV------VWMYSSWKQGMQIHVSHLRCQDIPDFV 473
++ + GE ++ LT + KS V + +K+GM I H++ +D+ +V
Sbjct: 448 KCEKSEKSEKGENINVDLTY-DIKSFVDTVERQAEQINMFKEGMWIEAKHVKRKDLHTYV 506
Query: 474 FPGGVRPPKSLNEKKRK 490
P SL +K+RK
Sbjct: 507 SP-------SLLKKERK 516
>gi|322802531|gb|EFZ22846.1| hypothetical protein SINV_14294 [Solenopsis invicta]
Length = 592
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/482 (43%), Positives = 295/482 (61%), Gaps = 14/482 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D+ T EL++ L +F SEEE R+E+L +L+ +VK WI+ ++ + +
Sbjct: 21 ISVAEPKPMDIARTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRDTSIARNM 80
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
++ K++TFGSYRLGV DIDALCV P + R D +F F +L+ V
Sbjct: 81 P-PNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRAD-YFTSFFDLLRMQEEV 138
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
DL V +A VPVIK F+G+ +D+L+A+L IP+ +D D LL NLD++ V SLNG
Sbjct: 139 TDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNLDQKCVRSLNG 198
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR LR ++ WAKR GIYSN +G+LGG++WA+LVAR CQLYPNA
Sbjct: 199 CRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNA 258
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ L+ +FF +F+ WKWP PV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 259 VAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSDRYHLMPIITPAYPQQ 318
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T IMQE F+ + EEI GK TW LFEP +FFG +K+Y+ + +
Sbjct: 319 NSTFNVSISTRTIMQEAFENGLAITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLAKSLT 378
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCH-YFMGLGR- 421
A D +W G VES++R LI M+ER+ L + P F + +S C +F+GL
Sbjct: 379 AEDQLEWCGLVESKIRHLIGMLERNPHITL-AHVNPEAFPPLNPESGKHCSMWFIGLSFS 437
Query: 422 --KQGVSPQDGEKFDMRLTVEEFKSHV------VWMYSSWKQGMQIHVSHLRCQDIPDFV 473
++ + GE ++ LT + KS V + +K+GM I H++ +D+ +V
Sbjct: 438 KCEKSEKSEKGENINVDLTY-DIKSFVDTVERQAEQINMFKEGMWIEAKHVKRKDLNTYV 496
Query: 474 FP 475
P
Sbjct: 497 SP 498
>gi|145354311|ref|XP_001421431.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145354383|ref|XP_001421465.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581668|gb|ABO99724.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581702|gb|ABO99758.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 598
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/489 (41%), Positives = 299/489 (61%), Gaps = 23/489 (4%)
Query: 3 IISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKG 62
++S PT D +K L+ L +E ++ +E + R EVLG ++ +++DW+ + KG
Sbjct: 25 VMSNEMPTAFDEKLSKALDDKLREEDVYEDADECVRREEVLGEINALLQDWVLAASERKG 84
Query: 63 ISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFG--------KLF 114
I+++ + L+TFGSYRLGV GP+ DID LC+GP + +R +DFFG +
Sbjct: 85 ITED---MRPSCNLYTFGSYRLGVHGPAADIDTLCLGPRHLSREEDFFGWDENDYEGSFY 141
Query: 115 RMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDLDSLQDSLLHNL 173
++++ P E + PV DA VP IK F G +D+ Y L ++ +PEDLD Q S++ NL
Sbjct: 142 DVMRKHPGTESIVPVRDAIVPEIKLVFRGFEIDMAYTSLPSYTHVPEDLDVCQTSVMMNL 201
Query: 174 DEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLV 233
D+ V SLNGCRV D++L +VPN FR LR LR WA+RRG+YSN +GF GG+N A+LV
Sbjct: 202 DDPGVKSLNGCRVADQLLRVVPNHDAFRVALRTLRLWAQRRGVYSNVVGFFGGVNLAILV 261
Query: 234 ARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMP-HHVWDPRSNQRDRKHL 292
ARVCQLYPNA P++LV FF++++ W+W PVML PI + +P VWD R N+ +R L
Sbjct: 262 ARVCQLYPNAAPSMLVYSFFQLWSAWQWTTPVMLVPIVDEGLPGMRVWDERVNKAERYQL 321
Query: 293 MPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFK 352
M I+TP+YP NS++NVS +TL +++ EF+R KE+ + I W L+ +F +K
Sbjct: 322 MKILTPAYPAQNSTFNVSVSTLEVLKAEFKRGKEVTKMILLNTAKWEQLWCSLNFLEKYK 381
Query: 353 NYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGD--FSENSVKSS 410
+YL + I+AKN DF++W+GWV SR++ LI IE GG Q +PG + + +
Sbjct: 382 HYLMVTISAKNEDDFKKWEGWVGSRIKLLIQGIENATGG--QMLAHPGTSRYKDPEKDEN 439
Query: 411 SQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVV-WM-----YSSWKQGMQIHVSHL 464
S F+GL ++ ++ VE+F+ V WM S+W GMQ +V +L
Sbjct: 440 SHVTLFLGLFPSSLKKKEEKVSLNLNPAVEQFQMTVTSWMDRATGESNWVPGMQANVKYL 499
Query: 465 RCQDIPDFV 473
+ +D+P FV
Sbjct: 500 KRKDLPSFV 508
>gi|307183537|gb|EFN70300.1| Poly(A) polymerase gamma [Camponotus floridanus]
Length = 603
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/574 (39%), Positives = 321/574 (55%), Gaps = 38/574 (6%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D+ T EL++ L +F SEEE R+E+L +L+ +VK WI+ ++ + +
Sbjct: 33 ISVAEPKPIDIARTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRDTSIARNM 92
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
++ K++TFGSYRLGV DIDALCV P + R D+F F +L+ V
Sbjct: 93 P-PNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYR-SDYFATFFELLKMQEEV 150
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
DL V +A VPVIK F+G+ +D+L+A+L IP+ +D D LL NLD++ V SLNG
Sbjct: 151 TDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLKDDMLLKNLDQKCVRSLNG 210
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR LR ++ WAKR GIYSN +G+LGG++WA+LVAR CQLYPNA
Sbjct: 211 CRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNA 270
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ L+ +FF +F+ WKWP PV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 271 VAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSDRYHLMPIITPAYPQQ 330
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T IMQE F+ + EEI GK TW LFEP +FFG +K+Y+ + + +
Sbjct: 331 NSTFNVSVSTRTIMQEAFENGLAITEEIIIGKATWDKLFEPPNFFGKYKHYIVLLARSSS 390
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCH-YFMGLGRK 422
A D +W G VES++R LI +ER+ L + P F + C +F+GL
Sbjct: 391 AEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLDPEPGKHCSMWFIGLSFA 449
Query: 423 QGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPK 482
+ S +D++ VE + + S K+GM I H++ +D+ +V
Sbjct: 450 KSESLNIDLTYDIKSFVETIERQAEQI-SMLKEGMWIEAKHVKRKDLHTYV--------- 499
Query: 483 SLNEKKRKRIEVIESTKLKKSESSTAG--HSSGQKSSQTESGVALDGSHGLKSGPSVEPS 540
S+ L K E +G H +G + SG S G +PS
Sbjct: 500 --------------SSSLVKRERKVSGGVHRNGNIAGNGNSGSISPRSQG-------DPS 538
Query: 541 TSSVSSSTSASSRPQRPAVSIETEDDNATSVSQA 574
+S + + +R E + +NA+ V Q+
Sbjct: 539 RKRLSDQLDSCGKKRR-VNDTEEQIENASLVVQS 571
>gi|222629442|gb|EEE61574.1| hypothetical protein OsJ_15948 [Oryza sativa Japonica Group]
Length = 556
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/506 (43%), Positives = 296/506 (58%), Gaps = 16/506 (3%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS PT D+ ST LE++L +E L+ S G R + +
Sbjct: 13 EPISLVGPTPADLESTARLERLLREEGLYESARGDGGPGGGAPRPPRRRRPLGEAPHAAA 72
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
+ + FGS LGV G +DIDAL VGP Y R DFFG L L ET
Sbjct: 73 PGTPTAWPDRGHRPGAPFGS-TLGVHGRGSDIDALVVGPSYVDRDRDFFGALAAALAETA 131
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L PVP A VPVIK +F+GV VDL+YA + V+P DLD S+L LD T SL
Sbjct: 132 AVAELQPVPGAHVPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVLRGLDLATARSL 191
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RV D IL LVP+ FR+TLRC++ WAK RG+YSN GFLGG+ WA+LVA VC LYP
Sbjct: 192 NGVRVADEILRLVPDAAAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWAILVACVCLLYP 251
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQ----AMPHHVWDPRSNQRDRKHLMPIIT 297
NA P++L+ RFF++FA WKWP+PVML I++ + VWDPR N RD+ HLMPI+T
Sbjct: 252 NASPSMLLPRFFRVFARWKWPSPVMLRAIEHNDGELGLSLPVWDPRRNPRDKIHLMPIVT 311
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEI---EAGKRTWITLFEPYHFFGSFKNY 354
P+YPC NS YNVS TLR++ E+ +C+EI +G W LF+P++FFG++K+Y
Sbjct: 312 PAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQPFNFFGAYKSY 371
Query: 355 LQIHIAAKNA--GDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFS----ENSVK 408
LQ+ + D R+WKGWVESRLR L +E D G+L C L+P ++ +
Sbjct: 372 LQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPYAAEPHNEPRR 431
Query: 409 SSSQCHYFMGLGRKQGVSPQDGEK-FDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQ 467
+F+GL + Q + FD+R T E FK V+MY W+ GM++ V+H+R +
Sbjct: 432 RRRTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEE-VYMYDYWRPGMEVAVAHVRRK 490
Query: 468 DIPDFVFPGGVRPPKSLNEKKRKRIE 493
D+P +V +R P ++ KRKR +
Sbjct: 491 DLPSYVLRQLLRSPGRHDQLKRKRAD 516
>gi|410900416|ref|XP_003963692.1| PREDICTED: poly(A) polymerase gamma-like [Takifugu rubripes]
Length = 861
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 241/619 (38%), Positives = 344/619 (55%), Gaps = 29/619 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D TK+L + +F EEE R+ VLG+L+ VK+WI ++ K +
Sbjct: 24 ISLAPPREIDHHYTKKLCDAMQPFGVFEDEEELNHRLAVLGKLNNFVKEWIAEISELKNL 83
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
I K+FTFGSYRLGV DIDALCV P + R DFF F L++ +
Sbjct: 84 P-PSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-TDFFQSFFEKLKQHEEI 141
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V DA VPVIKFKF+G+ +DLL+A+L IP++LD DS+L NLD + + SLNG
Sbjct: 142 KDLRAVEDAFVPVIKFKFDGIEIDLLFARLALPSIPDNLDLRGDSILKNLDIRCIRSLNG 201
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN NFR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 202 CRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 261
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 262 VAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 321
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T IM EEF+ + +EI GK W LFEP HFF +K+Y+ + +A
Sbjct: 322 NSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKAEWSKLFEPPHFFQKYKHYIVLAASAST 381
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG EN ++ +F+G+
Sbjct: 382 EENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGS-KENRNENDFVSMWFIGII 440
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ ++ E ++ LT ++ F V ++ K GM+I +H++ + + ++
Sbjct: 441 FKKM---ENAESVNIDLTYDIQSFTDTVYRQANNINMLKNGMKIEATHVKKKQLNLYL-- 495
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
PP+ + +KKR ++ S+ S+ + S S T++G +S P
Sbjct: 496 ----PPELVQKKKRSIADLNRSSNGGSSKRISLDSSHLDSSRDTDTGTPFSSPPCKQSKP 551
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAA-LATGTIS 594
+ + S S P + ED ATS + TVA + L G I
Sbjct: 552 ASDTEDRWDSCSIDHEENVGSPK-KLFVEDSPATSAAPEAQEQGTSITVAGSVLEMGGI- 609
Query: 595 SFCQNESLEELEPPELTAP 613
L LE P + +P
Sbjct: 610 ------PLSSLEKPIVPSP 622
>gi|328871002|gb|EGG19374.1| polyA polymerase [Dictyostelium fasciculatum]
Length = 803
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/526 (39%), Positives = 307/526 (58%), Gaps = 43/526 (8%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS ++PT +D + ELE L LF EES R EVLG+LD IVK W +V++ K
Sbjct: 81 EPISLASPTSIDTKQSTELETTLRGFNLFEPPEESRLREEVLGKLDAIVKQWAIKVSVLK 140
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G + E+ E AK+FT+GSYRLGV +DID LCV P + R D FFG L +L P
Sbjct: 141 GFT-EQMASEVIAKIFTYGSYRLGVHASGSDIDTLCVTPKHIMRAD-FFGTLADVLCVHP 198
Query: 122 LVEDLT---------------------------------PVPDARVPVIKFKFNGVSVDL 148
+ + T PV DA VPVIK F G+ +DL
Sbjct: 199 EITEFTVSTFFSGSSGSSGGSSSGSSGLQRILIKKTMVMPVKDAFVPVIKMIFCGIPIDL 258
Query: 149 LYAQLQFSVIPEDLDSLQD-SLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCL 207
++A+L IPEDL+ L D + L N+D++ ++SLNGCRVTD+IL LVPN+ FR LRC+
Sbjct: 259 IFARLSIPAIPEDLNDLIDENYLKNVDDKCIVSLNGCRVTDQILRLVPNVTTFRMALRCI 318
Query: 208 RFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVML 267
+ WA+RRG+YSN +G LGG++WALL AR+CQLYPNA P+ +++RFFKI+ WKWP+P++L
Sbjct: 319 KLWAQRRGVYSNVLGLLGGVSWALLTARICQLYPNAAPSTIINRFFKIYDGWKWPSPILL 378
Query: 268 CPIQYQA-MPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKE 326
C IQ + VW+ +RD+ HLMPI+TP+YP NS+YNVS +TL +++ EF R E
Sbjct: 379 CQIQDGGQLAAKVWN---QKRDKSHLMPILTPAYPSMNSTYNVSRSTLSLLKSEFSRGAE 435
Query: 327 LCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIE 386
+ ++I++G+R W L E FF ++ YLQI ++A R+W+GW+ES+LR LI +E
Sbjct: 436 ITKKIDSGERKWTDLVEKGDFFTRYRFYLQIDVSAPEEDTHRKWEGWIESKLRILISNLE 495
Query: 387 RDMGGVLQCRLYPGDFSENSVKSSSQCH-YFMGLGRKQGVSPQDGEKFDMRLTVEEFKSH 445
+ ++ S + C +FMGL + + D+ V F ++
Sbjct: 496 QTPNMKFAIPYAKSFANKASAVNGGICTCFFMGLQFNFSTAIGADKNVDLTGAVTSF-TN 554
Query: 446 VVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGV-RPPKSLNEKKRK 490
++ + +++ + +++ +++P FV G PPK K++
Sbjct: 555 LIKDWPGKLPTIEMKIHYIKKKNLPVFVKDEGPEHPPKQKTAAKKR 600
>gi|383862407|ref|XP_003706675.1| PREDICTED: poly(A) polymerase gamma [Megachile rotundata]
Length = 616
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/477 (42%), Positives = 289/477 (60%), Gaps = 5/477 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T EL++ L +F SEEE R+E+L +L+ +VK WI+ ++ + +
Sbjct: 33 ISVAEPKPSDLTRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRDTSIARNM 92
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
++ K++TFGSYRLGV DIDALCV P + R D+F F +L+ V
Sbjct: 93 P-PNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYR-SDYFSSFFDLLKMQEEV 150
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
DL V +A VPVIK F+G+ +D+L+A+L IP+ +D D LL NLD++ V SLNG
Sbjct: 151 TDLRAVEEAFVPVIKMNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLDQKCVRSLNG 210
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR LR ++ WAKR GIYSN +G+LGG++WA+LVAR CQLYPNA
Sbjct: 211 CRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNA 270
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ L+ +FF +F+ WKWP PV+L + VWDPR N DR HLMPIITP+YP
Sbjct: 271 VAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITPAYPQQ 330
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T IMQE F+ + EEI GK TW LFEP +FFG +K+Y+ + + +
Sbjct: 331 NSTFNVSVSTRTIMQEAFETGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLARSLS 390
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCH-YFMGLGRK 422
A D +W G VES++R LI +ER+ L + P F + C +F+GL
Sbjct: 391 AEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLEPEPEGHCSMWFIGLLFA 449
Query: 423 QGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVR 479
+ + +D++ V+ + + S K+GM I H++ +D+ +V P +R
Sbjct: 450 KSENLNVDLTYDIKSFVDSIQRQAEQL-SVLKEGMWIEAKHVKRKDLHTYVSPSLLR 505
>gi|347969786|ref|XP_003436462.1| AGAP013207-PA [Anopheles gambiae str. PEST]
gi|333469270|gb|EGK97235.1| AGAP013207-PA [Anopheles gambiae str. PEST]
Length = 725
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/489 (41%), Positives = 298/489 (60%), Gaps = 24/489 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ P D+ TKELEK L +F +EEE R+E+L +L+ +VK W++ V++ K +
Sbjct: 28 ISTAEPKPEDIQKTKELEKSLEPFNVFEAEEELNHRMEILAKLNTLVKQWVRDVSISKNM 87
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ K++TFGSYRLGV DIDALCV P R D +FG F +L++ P V
Sbjct: 88 P-EAMAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERAD-YFGSFFELLKQQPEV 145
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ V +A VPVIK F+G+ +DLL+A+L IP++ D D LL NLD+++V SLNG
Sbjct: 146 TECRAVEEAFVPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDMLLKNLDQKSVRSLNG 205
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR LR ++ WAKR GIYSN++G+ GG++WA+LVAR CQLYPNA
Sbjct: 206 CRVTDEILRLVPNIDNFRLALRTIKLWAKRHGIYSNSLGYFGGVSWAMLVARTCQLYPNA 265
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ WKWP PV+L + VWDPR N +DR HLMPIITP+YP
Sbjct: 266 VAATLVHKFFLVFSRWKWPQPVLLKQPDNVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQ 325
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVSS+T ++M EF R ++ ++I GK+ W LFE FF +++++ + + + N
Sbjct: 326 NSTFNVSSSTRKVMLMEFNRGMQITDDIMMGKQMWEKLFEAPSFFYRYRHFIVLLVTSSN 385
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCH--------- 414
A D +W G VES++R LI +ER+ L + P + ++ S++ +
Sbjct: 386 ADDHLEWCGLVESKIRYLIQNLERNQHINL-AHVNPKCYEQHEQNSATTLNGADGKPTPF 444
Query: 415 ---YFMGLGRKQGVSPQDGEKFDMRLTVEEF----KSHVVWMYSSWKQGMQIHVSHLRCQ 467
+F+GL ++ + D+ +++ F H V + K GM+I H+R +
Sbjct: 445 CSLWFIGLEFERS----ENLNVDLTESIQSFTDSVHKHAVHI-KLLKDGMKIEARHVRRK 499
Query: 468 DIPDFVFPG 476
+ ++ P
Sbjct: 500 QLTQYLDPN 508
>gi|307201288|gb|EFN81136.1| Poly(A) polymerase gamma [Harpegnathos saltator]
Length = 609
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/488 (42%), Positives = 293/488 (60%), Gaps = 12/488 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P LD+ T EL++ L +F SEEE R+E+L +L+ +VK WI+ ++ + +
Sbjct: 29 ISVAEPKPLDIARTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRDTSIARNM 88
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
++ K++TFGSYRLGV DIDALCV P + R D+F F +L+ V
Sbjct: 89 P-PNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYR-SDYFNSFFELLKMQEEV 146
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
DL V +A VPVIK F+G+ +D+L+A+L IP+ +D D LL NLD++ V SLNG
Sbjct: 147 TDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNLDQKCVRSLNG 206
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR LR ++ WAKR GIYSN +G+LGG++WA+LVAR CQLYPNA
Sbjct: 207 CRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNA 266
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ L+ +FF +F+ WKWP PV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 267 VAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPIITPAYPQQ 326
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T IMQE F+ + EEI GK W LFEP +FF +K+Y+ + +
Sbjct: 327 NSTFNVSVSTRTIMQEAFENGLSITEEIIMGKANWDKLFEPPNFFSKYKHYIVLLARSST 386
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCH-YFMGLGRK 422
A D +W G VES++R LI +ER+ + + P F + C +F+GL
Sbjct: 387 AEDQLEWCGLVESKIRHLIGTLERN-PHINLAHVNPEAFPPLDPEPDKHCSMWFIGLLFA 445
Query: 423 QGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPK 482
+ + +D++ VE + + + K+GM I H++ +D+ +V P
Sbjct: 446 KSENLNIDLTYDIKSFVETIERQAEQI-NMLKEGMWIEAKHVKRKDLHTYVSP------- 497
Query: 483 SLNEKKRK 490
SL +K+RK
Sbjct: 498 SLLKKERK 505
>gi|308812011|ref|XP_003083313.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
gi|116055193|emb|CAL57589.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
Length = 606
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/489 (42%), Positives = 295/489 (60%), Gaps = 24/489 (4%)
Query: 3 IISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKG 62
+IS + PT D+ + L++ L E ++ EE R EVLG L+ ++++W + + KG
Sbjct: 19 VISNAPPTDRDLALSAALDEKLHTEDVYEDPEECTRREEVLGELNALLQEWTRTASAAKG 78
Query: 63 ISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFG--------KLF 114
I+++ + L+TFGSYRLGV GP+ DID LC+GP + +R +DFFG +
Sbjct: 79 ITED---MRPSCNLYTFGSYRLGVHGPAADIDTLCLGPRHLSREEDFFGFEENDYEGSFY 135
Query: 115 RMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDLDSLQDSLLHNL 173
++++ P E++ PV DA VP IK F G +D+ Y L ++ +PEDLD S+L NL
Sbjct: 136 DVMRKHPGTEEIVPVRDAIVPEIKTVFRGFEIDMAYTSLPSYTSVPEDLDVCATSVLLNL 195
Query: 174 DEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLV 233
D+ V SLNGCRV D++L VPN FR LR LR WA+RRGIYSN +GF GG+N A+LV
Sbjct: 196 DDPGVKSLNGCRVADQLLREVPNHDAFRVALRTLRLWAQRRGIYSNVVGFFGGVNLAILV 255
Query: 234 ARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMP-HHVWDPRSNQRDRKHL 292
ARVCQLYPNA ++LV FF++++ W+W PVML PI + +P VWD R N+ +R L
Sbjct: 256 ARVCQLYPNAASSMLVYSFFQLWSAWQWSTPVMLVPIVDEGLPGMRVWDERVNKAERYQL 315
Query: 293 MPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFK 352
M I+TP+YP NS++NVS +TL +++ EF+R KE+ + I K W L+ F +K
Sbjct: 316 MKILTPAYPAQNSTFNVSVSTLEVLKAEFRRGKEVTKNILLNKCKWEDLWIKTSFLTMYK 375
Query: 353 NYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQ 412
+YL + I+AK A DF++W+GWV SR++ LI IE GG Q +PG +
Sbjct: 376 HYLMVSISAKTAEDFKKWEGWVGSRVKLLIQGIENCTGG--QMLAHPGTARYKDPEKEEN 433
Query: 413 CHYFMGLGRKQGVSPQDGEKFDMRLT--VEEFKSHVV-WM-----YSSWKQGMQIHVSHL 464
H + LG S + EK M L VE+F+ V WM S+W GMQ V H+
Sbjct: 434 THVILFLGLFPS-SLKKKEKVAMNLNPAVEQFQMQVTSWMDRATGESNWVPGMQAMVRHV 492
Query: 465 RCQDIPDFV 473
+ +D+P FV
Sbjct: 493 KRKDLPGFV 501
>gi|328792143|ref|XP_393202.3| PREDICTED: poly(A) polymerase gamma [Apis mellifera]
Length = 619
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/473 (43%), Positives = 285/473 (60%), Gaps = 5/473 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D T EL++ L +F SEEE R+E+L +L+ +VK WI+ ++ + +
Sbjct: 34 ISVAEPKPSDFTRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRDTSVARNM 93
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
++ K++TFGSYRLGV DIDALCV P + R D+F F +L+ V
Sbjct: 94 P-PNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYR-SDYFTSFFELLKMQEEV 151
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
DL V +A VPVIK F+G+ +D+L+A+L IP+ +D D LL NLD++ V SLNG
Sbjct: 152 TDLRAVEEAFVPVIKMNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLDQKCVRSLNG 211
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR LR ++ WAKR GIYSN +G+LGG++WA+LVAR CQLYPNA
Sbjct: 212 CRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNA 271
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ L+ +FF +F+ WKWP PV+L + VWDPR N DR HLMPIITP+YP
Sbjct: 272 VAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITPAYPQQ 331
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T IMQE F+ + EEI GK TW LFEP +FFG +K+Y+ + +
Sbjct: 332 NSTFNVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLARSLT 391
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCH-YFMGLGRK 422
A D +W G VES++R LI +ER+ L + P F + C +F+GL
Sbjct: 392 AEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLEPEPERHCSMWFIGLLFA 450
Query: 423 QGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFP 475
+ + +D++ V+ + S K+GM I V H++ +D+ +V P
Sbjct: 451 KSENLNVDLTYDIKSFVDSILRQAEQL-SMLKEGMWIEVKHVKKRDLHTYVSP 502
>gi|380022244|ref|XP_003694961.1| PREDICTED: poly(A) polymerase gamma [Apis florea]
Length = 619
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/473 (43%), Positives = 285/473 (60%), Gaps = 5/473 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D T EL++ L +F SEEE R+E+L +L+ +VK WI+ ++ + +
Sbjct: 34 ISVAEPKPSDFTRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRDTSVARNM 93
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
++ K++TFGSYRLGV DIDALCV P + R D+F F +L+ V
Sbjct: 94 P-PNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYR-SDYFTSFFELLKMQEEV 151
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
DL V +A VPVIK F+G+ +D+L+A+L IP+ +D D LL NLD++ V SLNG
Sbjct: 152 TDLRAVEEAFVPVIKMNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLDQKCVRSLNG 211
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR LR ++ WAKR GIYSN +G+LGG++WA+LVAR CQLYPNA
Sbjct: 212 CRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNA 271
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ L+ +FF +F+ WKWP PV+L + VWDPR N DR HLMPIITP+YP
Sbjct: 272 VAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITPAYPQQ 331
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T IMQE F+ + EEI GK TW LFEP +FFG +K+Y+ + +
Sbjct: 332 NSTFNVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLARSLT 391
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCH-YFMGLGRK 422
A D +W G VES++R LI +ER+ L + P F + C +F+GL
Sbjct: 392 AEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLEPEPERHCSMWFIGLLFA 450
Query: 423 QGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFP 475
+ + +D++ V+ + S K+GM I V H++ +D+ +V P
Sbjct: 451 KSENLNVDLTYDIKSFVDSILRQAEQL-SMLKEGMWIEVKHVKKRDLHTYVSP 502
>gi|340709674|ref|XP_003393427.1| PREDICTED: poly(A) polymerase gamma-like [Bombus terrestris]
Length = 617
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 226/598 (37%), Positives = 321/598 (53%), Gaps = 48/598 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D T EL++ L +F SE E R+E+L +L+ +VK WI+ ++ + +
Sbjct: 34 ISVAEPKPSDFTRTNELKEALKPYNVFESEAELNHRMEILSKLNTLVKQWIRDTSIARNM 93
Query: 64 --SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
S EQ+ K++TFGSYRLGV DIDALCV P + R D+F F +L+
Sbjct: 94 PSSVAEQV---GGKIYTFGSYRLGVHHKGADIDALCVVPRHIYR-SDYFASFFELLKMQE 149
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V DL V +A VPVIK F+G+ +D+L+A+L IP+ +D D LL NLD++ V SL
Sbjct: 150 EVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLSLKEIPDSMDLKDDMLLKNLDQKCVRSL 209
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD IL LVPNI NFR LR ++ WAKR GIYSN +G+LGG++WA+LVAR CQLYP
Sbjct: 210 NGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYP 269
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NA+ L+ +FF +F+ WKWP PV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 270 NAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPIITPAYP 329
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
NS++NVS +T IMQE F+ + EEI GK TW LFEP +FFG +K+Y+ + +
Sbjct: 330 QQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLARS 389
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCH-YFMGLG 420
A D +W G VES++R LI +ER+ L + P F + C +F+GL
Sbjct: 390 LTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLKPEPEGHCSMWFIGLL 448
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFP----- 475
+ + +D++ V+ + + K GM I H++ +D+ +V P
Sbjct: 449 FAKSENLNIDLTYDIKSFVDSILRQAEQL-NLLKDGMWIEAKHVKRKDLHTYVSPSLLKR 507
Query: 476 --------------------GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQK 515
GGV P + RKR+ S+ ST + ++
Sbjct: 508 ERKISGNVHKNGNIAGNGNTGGVSPRNQGDLTNRKRL----------SDQSTDAYGKKRR 557
Query: 516 SSQTESGVALDGSHGLKSGPSVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQ 573
+ E VA HG V+ +S S Q + + A++V+Q
Sbjct: 558 VTDNEQAVA----HGEDGSLVVQSCGEDSNSGFSLDEYKQTLTATKDEGPTGASTVAQ 611
>gi|426223633|ref|XP_004005979.1| PREDICTED: poly(A) polymerase gamma [Ovis aries]
Length = 740
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 234/614 (38%), Positives = 349/614 (56%), Gaps = 49/614 (7%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISEVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I E+LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSV 537
P + L +KK K+S S SSG +S ++ +LD S+ L S S
Sbjct: 497 --PAEILQKKK------------KQSLSDVTRSSSGPQSKRS----SLD-SNCLDS--SR 535
Query: 538 EPSTSSVSSSTSASSRPQRPAV--SIETEDDNAT----------SVSQAQNFN--QVGAT 583
+ + +S ++++P +P + S ETE +NA SV AQ + +GA
Sbjct: 536 DTDNETPFNSPVSANKPSKPDIPPSGETERNNAEPAAVIMEKPLSVPPAQGLSIPVIGAK 595
Query: 584 VAAALATGTISSFC 597
V AAL + + C
Sbjct: 596 VDAALKAVSPPAVC 609
>gi|403415037|emb|CCM01737.1| predicted protein [Fibroporia radiculosa]
Length = 626
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/508 (40%), Positives = 295/508 (58%), Gaps = 41/508 (8%)
Query: 18 KELEKILVDE----KLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEAN 73
KE+ L++E F +EEE+ R VLGRL +VK +++RV++ G+S E A
Sbjct: 24 KEVTTTLMEELRRQGTFETEEEAKTREIVLGRLAAVVKKFVRRVSLANGMS-EAAANAAG 82
Query: 74 AKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDAR 133
K+FTFGSYRLGV GP +DID LCV P + TR +DFF L ML+ET V +++ VP+A
Sbjct: 83 GKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTR-EDFFDVLEEMLKETEGVTEVSGVPEAY 141
Query: 134 VPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSL 193
VP+IK K NG+ +DL A+L S IP+DL D+LL NLDE+ V SLNG RVTD IL L
Sbjct: 142 VPIIKTKINGIPIDLTMARLALSSIPDDLSLQDDNLLRNLDERCVRSLNGSRVTDEILRL 201
Query: 194 VPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFF 253
VPN+ FR +LRC++ WA+RR IYSN GFLGG+ WA+LVAR+CQLYPNA+ +VSRFF
Sbjct: 202 VPNVTVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNAIAGAIVSRFF 261
Query: 254 KIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTT 313
I W WP PV+L I+ +P VW+P+ DR H MPIITP+YP +++NV+++T
Sbjct: 262 IIMYQWSWPQPVLLKQIEEGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATHNVTAST 321
Query: 314 LRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGW 373
IM EEF++ E+ +++ G W LF + FF + YLQ+ + N+ +W G
Sbjct: 322 QMIMTEEFKKGSEIVDKVIVGTAEWSELFAKHDFFHKHRYYLQVIASTGNSDLQIKWSGT 381
Query: 374 VESRLRQLIHMIERDMGGVLQCRLYPG------DFSENSVKSSSQCHYFMGLG--RKQGV 425
VESR+RQL+ +E +L G S V++ +Q + RK+ +
Sbjct: 382 VESRIRQLVMKLEYVESLILAHPFIKGFEQVSHCISSEEVRAVAQGEVSEAVSKRRKEDI 441
Query: 426 SPQDG-------------------------EKFDMRLTVEEFKSHVVWMYSSWKQG-MQI 459
++G K D+ EF + +V M+ + + M I
Sbjct: 442 EGKEGASTVYSTTFYIGLLIEPKLPGSSGPRKLDISYPTTEF-TKLVKMWEKYDEAKMGI 500
Query: 460 HVSHLRCQDIPDFVFPGGVRPPKSLNEK 487
V H++ +PD+V+ G R P+S ++
Sbjct: 501 IVRHIKSTALPDYVYDEGERQPRSAQKR 528
>gi|410954895|ref|XP_003984095.1| PREDICTED: poly(A) polymerase gamma [Felis catus]
Length = 762
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 227/605 (37%), Positives = 344/605 (56%), Gaps = 31/605 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 46 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 105
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 106 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 163
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 164 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 223
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 224 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 283
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 284 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 343
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 344 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 403
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 404 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 462
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 463 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 517
Query: 478 VRPPKSLNEKKRKRI-EVIESTKLKKSESSTAGHSSGQKSSQTESGVALDG--SHGLKSG 534
P + L +KK++ + +V S+ S+ S+ + S T++G + S S
Sbjct: 518 --PAEILQKKKKQSLSDVSRSSGGPPSKRSSLDSNCLDSSRDTDNGTPFNSPVSANKPSK 575
Query: 535 PSVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFN--QVGATVAAALATGT 592
P V PS + ++T PA I + SV QAQ + +GA V +A+ +
Sbjct: 576 PDVLPSGETERNNT-------EPAAVIA---EKPLSVPQAQGLSIPVIGAKVDSAVKAVS 625
Query: 593 ISSFC 597
+ C
Sbjct: 626 PPAVC 630
>gi|440911569|gb|ELR61221.1| Poly(A) polymerase gamma, partial [Bos grunniens mutus]
Length = 737
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 233/614 (37%), Positives = 349/614 (56%), Gaps = 49/614 (7%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 22 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISEVSESKNL 81
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 82 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 139
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I E+LD DS L +LD + + SLNG
Sbjct: 140 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIRCIRSLNG 199
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 200 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 259
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 260 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 319
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 320 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 379
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 380 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 438
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 439 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 493
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSV 537
P + L +KK K+S S SSG +S ++ +LD S+ L S S
Sbjct: 494 --PAEILQKKK------------KQSLSDVTRSSSGPQSKRS----SLD-SNCLDS--SR 532
Query: 538 EPSTSSVSSSTSASSRPQRPAV--SIETEDDNAT----------SVSQAQNFN--QVGAT 583
+ + +S ++++P +P + S ETE +NA SV AQ + +GA
Sbjct: 533 DTDNETPFNSPVSANKPSKPDIPPSGETERNNAEPAAVIVEKPLSVPPAQGLSIPVIGAK 592
Query: 584 VAAALATGTISSFC 597
V +AL + + C
Sbjct: 593 VDSALKAVSPPAVC 606
>gi|147900391|ref|NP_001091535.1| poly(A) polymerase gamma [Bos taurus]
gi|146186839|gb|AAI40626.1| PAPOLG protein [Bos taurus]
gi|296482594|tpg|DAA24709.1| TPA: poly(A) polymerase gamma [Bos taurus]
Length = 740
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 233/614 (37%), Positives = 349/614 (56%), Gaps = 49/614 (7%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISEVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I E+LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSV 537
P + L +KK K+S S SSG +S ++ +LD S+ L S S
Sbjct: 497 --PAEILQKKK------------KQSLSDVTRSSSGPQSKRS----SLD-SNCLDS--SR 535
Query: 538 EPSTSSVSSSTSASSRPQRPAV--SIETEDDNAT----------SVSQAQNFN--QVGAT 583
+ + +S ++++P +P + S ETE +NA SV AQ + +GA
Sbjct: 536 DTDNETPFNSPVSANKPSKPDIPPSGETERNNAEPAAVIVEKPLSVPPAQGLSIPVIGAK 595
Query: 584 VAAALATGTISSFC 597
V +AL + + C
Sbjct: 596 VDSALKAVSPPAVC 609
>gi|170031421|ref|XP_001843584.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
gi|167869844|gb|EDS33227.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
Length = 661
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/548 (38%), Positives = 314/548 (57%), Gaps = 31/548 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D T EL+K L +F E E R+E+L +L+ +VK W++ V++ K +
Sbjct: 38 ISLAEPKPEDHTKTVELQKALEPYNVFEDESELNHRMEILSKLNTLVKQWVRDVSISKNM 97
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ K++TFGSYRLGV DIDALCV P R D +FG F +L++ P V
Sbjct: 98 P-EALAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERQD-YFGSFFELLKKQPEV 155
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ V +A VPVIK F+G+ +DLL+A+L IP++ D D LL NLD ++V SLNG
Sbjct: 156 TECRAVEEAFVPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDMLLKNLDPKSVRSLNG 215
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR LR ++ WAK+ GIYSN++G+ GG++WA+LVAR CQLYPNA
Sbjct: 216 CRVTDEILRLVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVSWAMLVARTCQLYPNA 275
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ WKWP PV+L + VWDPR N +DR HLMPIITP+YP
Sbjct: 276 VAATLVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQ 335
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVSS+T ++M EF R ++ +EI GK W LFE FF +++++ + + + N
Sbjct: 336 NSTFNVSSSTRKVMLNEFNRGMQITDEIMLGKAGWDKLFEAPSFFFKYRHFIVLLVTSNN 395
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSV----------KSSSQC 413
A D +W G VES++R LI +ER++ L + P F + K++
Sbjct: 396 ADDHLEWCGLVESKIRYLIQNLERNLHINL-AHVNPKCFEQQEQNQKDDGGEGGKTTLCS 454
Query: 414 HYFMGLGRKQGVSPQDGEKFDMRLTVEEF----KSHVVWMYSSWKQGMQIHVSHLRCQDI 469
+F+GL ++ + D+ +++ F H V + K GM+I H+R + +
Sbjct: 455 LWFIGLEFERS----ENLNVDLTESIQNFTDAVHKHAVHI-KVLKDGMKIEARHVRRKQL 509
Query: 470 PDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHS---SGQKSSQTESGVALD 526
++ P L +++ + ST L S + AG++ SG + +S AL
Sbjct: 510 NQYL------DPNLLKRERKNSDSGLGSTALNTSGGAAAGNNTSGSGTTLRKRQSSEALQ 563
Query: 527 GSHGLKSG 534
+ K G
Sbjct: 564 AAVASKKG 571
>gi|431912670|gb|ELK14688.1| Poly(A) polymerase gamma [Pteropus alecto]
Length = 741
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/546 (39%), Positives = 321/546 (58%), Gaps = 19/546 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRI-EVIESTKLKKSESSTAGHSSGQKSSQTESGVALD--GSHGLKSG 534
P + L +KK++ + +V S+ +S+ S+ S S T++G + GS S
Sbjct: 497 --PAEILQKKKKQSLSDVNRSSSGPQSKRSSLDGSCLDSSRDTDNGTPFNSPGSTNKPSK 554
Query: 535 PSVEPS 540
P V PS
Sbjct: 555 PDVPPS 560
>gi|344291804|ref|XP_003417620.1| PREDICTED: poly(A) polymerase gamma-like [Loxodonta africana]
Length = 741
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 225/573 (39%), Positives = 329/573 (57%), Gaps = 37/573 (6%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLACPKEIDHIYTEKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQSISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPADRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTES--GVALDGSHGLKSGP 535
P ++L +KK++ + S SSG S+ S G LD S SG
Sbjct: 497 --PSETLQKKKKQSL-------------SDVSRSSGGLQSKRPSLDGSCLDSSRDTDSG- 540
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSIETEDDNA 568
P TS VSS S+P P + ETE +A
Sbjct: 541 --TPLTSPVSS--VKPSKPDSPPMG-ETERSSA 568
>gi|350422462|ref|XP_003493171.1| PREDICTED: poly(A) polymerase gamma-like [Bombus impatiens]
Length = 610
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/554 (38%), Positives = 301/554 (54%), Gaps = 30/554 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D T EL++ L +F SE E R+E+L +L+ +VK WI+ ++ + +
Sbjct: 30 ISVAEPKPSDFTRTNELKEALKPYNVFESEAELNHRMEILSKLNTLVKQWIRDTSIARNM 89
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
Q K++TFGSYRLGV DIDALCV P + R D+F F +L+ V
Sbjct: 90 PSSVADQ-VGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYR-SDYFASFFELLKMQEEV 147
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
DL V +A VPVIK F+G+ +D+L+A+L IP+ +D D LL NLD++ V SLNG
Sbjct: 148 TDLRAVEEAFVPVIKMNFDGIEIDMLFAKLSLKEIPDSMDLKDDMLLKNLDQKCVRSLNG 207
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR LR ++ WAKR GIYSN +G+LGG++WA+LVAR CQLYPNA
Sbjct: 208 CRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQLYPNA 267
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ L+ +FF +F+ WKWP PV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 268 VAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPIITPAYPQQ 327
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T IMQE F+ + EEI GK TW LFEP +FFG +K+Y+ + +
Sbjct: 328 NSTFNVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLARSLT 387
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCH-YFMGLGRK 422
A D +W G VES++R LI +ER+ L + P F + C +F+GL
Sbjct: 388 AEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLKPEPEGHCSMWFIGLLFA 446
Query: 423 QGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFP------- 475
+ + +D++ V+ + + K GM I H++ +D+ +V P
Sbjct: 447 KSENLNIDLTYDIKSFVDSILRQAEQL-NLLKDGMWIEAKHVKRKDLHTYVSPSLLKRER 505
Query: 476 ------------------GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSS 517
G V P + RKR+ + K +T +G+ S
Sbjct: 506 KISGNVHKNGNIAGNGNTGSVSPRNQGDLTNRKRLSDQSTDTYGKKRRATDNEQAGEDGS 565
Query: 518 QTESGVALDGSHGL 531
D + G
Sbjct: 566 LVVQSCGEDSNSGF 579
>gi|311252569|ref|XP_003125156.1| PREDICTED: poly(A) polymerase gamma-like [Sus scrofa]
Length = 741
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 224/605 (37%), Positives = 344/605 (56%), Gaps = 31/605 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISEVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRI-EVIESTKLKKSESSTAGHSSGQKSSQTESGVALDG--SHGLKSG 534
P + L +KK++ + +V S+ +S+ S+ + S T++G + S S
Sbjct: 497 --PAEILQKKKKQSLSDVTRSSSGPQSKRSSLDSNCLDSSRDTDNGTPFNSPVSANKPSK 554
Query: 535 PSVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFN--QVGATVAAALATGT 592
P + P + ++T + AV +E SV AQ + +GA V +A+ +
Sbjct: 555 PDIPPLGETERNNTEPT------AVIVE----KPLSVPPAQGLSIPVIGAKVDSAVKAVS 604
Query: 593 ISSFC 597
+ C
Sbjct: 605 PPAVC 609
>gi|291386749|ref|XP_002709901.1| PREDICTED: poly(A) polymerase gamma [Oryctolagus cuniculus]
Length = 739
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/608 (36%), Positives = 342/608 (56%), Gaps = 39/608 (6%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESG------VALDGSHGL 531
P + L +KK++ + + + L +S+ S+ + S T++G V+ + L
Sbjct: 497 --PAEILQKKKKQSLSDVSRSGL-QSKRSSLDSNCLDSSRDTDNGTPFNSPVSTNKPSKL 553
Query: 532 KSGPSVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFN--QVGATVAAALA 589
S P+ E +SV + +P SV AQ + +GA V + +
Sbjct: 554 DSPPAGETERNSVEPAAVIVEKP--------------LSVPPAQGLSIPVIGAKVDSTVK 599
Query: 590 TGTISSFC 597
T + + C
Sbjct: 600 TASSPAVC 607
>gi|157109674|ref|XP_001650777.1| poly a polymerase [Aedes aegypti]
gi|108878961|gb|EAT43186.1| AAEL005356-PA [Aedes aegypti]
Length = 780
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/490 (40%), Positives = 292/490 (59%), Gaps = 25/490 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T ELEK L +F E E R+E+L +L+ +VK W++ V++ K +
Sbjct: 94 ISLAEPKPEDIQKTTELEKALEPYNVFEEESELNHRMEILAKLNTLVKQWVRDVSISKNM 153
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ K++TFGSYRLGV DIDALCV P R D +FG F +L++ P V
Sbjct: 154 P-EALAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERAD-YFGSFFELLKKQPEV 211
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ V +A VPVIK F+G+ +DLL+A+L IP++ D D LL NLD ++V SLNG
Sbjct: 212 TECRAVEEAFVPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDKLLKNLDPKSVRSLNG 271
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR LR ++ WAK+ GIYSN++G+ GG++WA+LVAR CQLYPNA
Sbjct: 272 CRVTDEILRLVPNIDNFRLALRAIKLWAKKHGIYSNSLGYFGGVSWAMLVARTCQLYPNA 331
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ WKWP PV+L + VWDPR N +DR HLMPIITP+YP
Sbjct: 332 VAATLVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQ 391
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVSS+T ++M EF R ++ +EI K W LFE FF +++++ + + + N
Sbjct: 392 NSTFNVSSSTRKVMLNEFNRGMQITDEIMLSKAGWDKLFEAPSFFFKYRHFIVLLVTSNN 451
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSE------------NSVKSSS 411
A D +W G VES++R LI +ER+ L + P F + + ++S+
Sbjct: 452 ADDHLEWCGLVESKIRYLILNLERNQHINL-AHVNPKCFEQHEQNQTERQRESDGSRAST 510
Query: 412 QCH-YFMGLGRKQGVSPQDGEKFDMRLTVEEF----KSHVVWMYSSWKQGMQIHVSHLRC 466
C +F+GL ++ + D+ +++ F H V + K GM+I H+R
Sbjct: 511 LCSLWFIGLEFERS----ENLNVDLTESIQSFTDSVHKHAVHI-KLLKDGMKIEARHVRR 565
Query: 467 QDIPDFVFPG 476
+ + ++ P
Sbjct: 566 KQLSQYLDPN 575
>gi|157822073|ref|NP_001100714.1| poly(A) polymerase gamma [Rattus norvegicus]
gi|149044811|gb|EDL97997.1| poly(A) polymerase gamma (predicted) [Rattus norvegicus]
Length = 739
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 224/602 (37%), Positives = 339/602 (56%), Gaps = 27/602 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI ++ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDISESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ V
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGV 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKANNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSV 537
P + L +KK+ +V S+ +S+ S+ + S T+SG + G +
Sbjct: 497 --PAEILQKKKKSLSDVSRSSGGLQSKRSSLDSNCLDSSRDTDSGTPFNS-----PGSAH 549
Query: 538 EPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFN--QVGATVAAALATGTISS 595
+PS + + S + AV +E SV AQ + +GA AA+ + +
Sbjct: 550 KPSNPDSPTGDAERSNAEPMAVIVE----KLPSVPPAQGLSIPVIGAKGDAAVKAVSSPA 605
Query: 596 FC 597
C
Sbjct: 606 VC 607
>gi|449549561|gb|EMD40526.1| hypothetical protein CERSUDRAFT_80191 [Ceriporiopsis subvermispora
B]
Length = 629
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/511 (40%), Positives = 299/511 (58%), Gaps = 43/511 (8%)
Query: 18 KELEKILVDE----KLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEAN 73
KE+ L+DE F +EEE+ R VLGR+ +VK +++ V++ +G+S E A
Sbjct: 24 KEVTVTLMDELRRQGTFETEEEAKTREIVLGRVAALVKRFVRHVSLKRGLS-EAAANAAG 82
Query: 74 AKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDAR 133
K+FTFGSYRLGV GP +DID LCV P + +R +DFF ML+ET V + + VPDA
Sbjct: 83 GKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSR-EDFFEVFEEMLKETEGVTEASGVPDAY 141
Query: 134 VPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSL 193
VP++K K +G+ +DLL A+L S IP+DL D+LL NLDE+ V SLNG RVTD IL L
Sbjct: 142 VPILKAKISGIPLDLLMARLALSAIPDDLSLQDDNLLRNLDERCVRSLNGSRVTDEILRL 201
Query: 194 VPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFF 253
VPN+ FR +LRC++ WA+RR IYSN GFLGG+ WA+LVAR+CQLYPNA+ +VSRFF
Sbjct: 202 VPNVSVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNAIAGAIVSRFF 261
Query: 254 KIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTT 313
I W WP PV+L I+ +P VW+P+ DR H MPIITP+YP +++NVS++T
Sbjct: 262 IIMYQWSWPQPVLLKQIEDGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATHNVSAST 321
Query: 314 LRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFR-QWKG 372
IM EEF++ E+ +++ GK W LF + FF ++ YLQ+ IA+ + + + +W G
Sbjct: 322 QMIMTEEFKKGSEIVDKVIVGKANWSELFAKHDFFHKYRYYLQV-IASTGSQELQTKWAG 380
Query: 373 WVESRLRQLIHMIERDMGGVLQCRLYPG------DFSENSVKSSSQCHY--FMGLGRKQG 424
VESR+RQL+ +E L G S+ V++ +Q + +K+
Sbjct: 381 TVESRIRQLVMKLEYVDSLTLAHPFIKGFEQVSCCLSDEEVRAVAQGEISEVIAKRKKED 440
Query: 425 VSPQDG-------------------------EKFDMRLTVEEFKSHVVWMYSSWKQG-MQ 458
+ +DG K D+ EF + +V M+ + M
Sbjct: 441 IEGKDGASTVYSTTFYIGLAIEPKQPGAVGPRKLDISYPTTEF-TKLVKMWEKYDDSTMG 499
Query: 459 IHVSHLRCQDIPDFVFPGGVRPPKSLNEKKR 489
I V H++ +PD+VF G R P+S ++ +
Sbjct: 500 IVVRHIKSTALPDYVFEPGERQPRSAQKRPK 530
>gi|242024112|ref|XP_002432474.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
gi|212517907|gb|EEB19736.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
Length = 625
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/579 (37%), Positives = 332/579 (57%), Gaps = 24/579 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P + D+ TKELE+ L +F S+ E R+EVL +L+ +VK+WI +++++
Sbjct: 36 ISLALPKISDIQKTKELEEALKPFNVFESDAELNFRMEVLSKLNNLVKEWIIDISVNQKN 95
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ ++ K++TFGSYRLGV DIDALCV P + R D+F + +L+E V
Sbjct: 96 MPKNVAEQVGGKIYTFGSYRLGVHQKGADIDALCVAPRHIDR-SDYFTSFYELLKEQKEV 154
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
L V +A VPVIK F+G+ +DLL+A+L IP+D+D D LL NLD++ V SLNG
Sbjct: 155 SQLRSVENAFVPVIKMNFDGIEIDLLFARLALKEIPDDMDLKDDYLLKNLDQKCVRSLNG 214
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN NFR LR ++ WAK+ +YSNA+G+LGG++WA+LVAR CQLYPNA
Sbjct: 215 CRVTDEILRLVPNKENFRLALRVIKLWAKKHRVYSNALGYLGGVSWAMLVARTCQLYPNA 274
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ WKWP PV+L + VWDPR N DR HLMPIITP+YP
Sbjct: 275 VAATLVHKFFLVFSKWKWPQPVLLKQPDTLNLNFPVWDPRVNVSDRYHLMPIITPAYPQQ 334
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T IMQ+E + + E+I GK W LFE HFF +++Y+ + +++ +
Sbjct: 335 NSTFNVSLSTRSIMQDELKLGLSITEDIMLGKCGWEKLFETSHFFSKYRHYIVLLLSSNS 394
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSE-NSVKSSSQC-HYFMGLGR 421
D +W G VES++R L+ +ER+ L + P F + S+ C +F+G+
Sbjct: 395 PEDQLEWCGLVESKIRLLVGNLERNHHINL-AHVNPDSFQQPQEPDSNVLCTMWFIGV-- 451
Query: 422 KQGVSPQDGE-KFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
V + G D+ + F VV + WK+GM++ +++ +++ ++ P
Sbjct: 452 ---VFAKTGNLNVDLTYDIMSFTDTVVRQARASNIWKEGMKVVAKYVKRKELTSYLSPSV 508
Query: 478 VRPPKSLNEKKR-----KRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLK 532
++ K LN K V E K +K +T+G + + + E+ A G
Sbjct: 509 LKKEKRLNTTPNASPGSKNGGVQEKNKKRKMAETTSGPMAKKPRAVDEN--ACHGDESPL 566
Query: 533 SGPSVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSV 571
S + + +S+ SS +R IET ++ ++++
Sbjct: 567 SKNDLVLNCDETNSTFDESSEEKR----IETNEEQSSNI 601
>gi|426335656|ref|XP_004029330.1| PREDICTED: poly(A) polymerase gamma [Gorilla gorilla gorilla]
Length = 736
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/600 (36%), Positives = 336/600 (56%), Gaps = 26/600 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS ++P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSV 537
P + L +KK++ + + S SS S + + D +G P
Sbjct: 497 --PAEILQKKKKQSLSDV-------SRSSGGLQSKRSSLDSSCLDSSRDTDNGT---PFN 544
Query: 538 EPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISSFC 597
P++ S S S + R ++ E + +Q + +GA V + + T + + C
Sbjct: 545 SPASKSDSPSVGEAERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVDSTVKTVSPPAVC 604
>gi|72012045|ref|XP_780989.1| PREDICTED: poly(A) polymerase gamma [Strongylocentrotus purpuratus]
Length = 670
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/472 (43%), Positives = 281/472 (59%), Gaps = 14/472 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS P D TKEL + L +F +EEE R+ VLG+LD IVKDWI+ V +K I
Sbjct: 20 ISLVGPRPEDNRQTKELVEALKPHGVFENEEELNHRLVVLGKLDQIVKDWIRLVAEEKNI 79
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
K++TFGSYRLGV DID LCV P + R DFF + +++ P
Sbjct: 80 P-PNIADTVGGKIYTFGSYRLGVHTKGADIDTLCVAPLHVER-SDFFKSFYDIVKALPET 137
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+D V +A VPVIK F+G+ +D+L+A+L V+PE+LD DSLL NLD + V SLNG
Sbjct: 138 KDCRAVEEAFVPVIKLVFDGIEMDILFARLALRVVPENLDLTDDSLLKNLDPKCVRSLNG 197
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL++VP+ NFR TLR ++ WAK++G+YSNA+GFLGG++WA+LVAR CQLYPNA
Sbjct: 198 CRVTDEILNVVPSKENFRLTLRTIKLWAKKKGVYSNALGFLGGVSWAMLVARTCQLYPNA 257
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA-MPHHVWDPRSNQRDRKHLMPIITPSYPC 302
+ LV++FF +F W WP PV+L P + WDPR N DR HLMPIITP+YP
Sbjct: 258 AASTLVNKFFLVFTKWAWPQPVLLKPPNTSTELGFAEWDPRVNVSDRFHLMPIITPAYPQ 317
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK 362
NS+YNVS +T ++++E Q + +EI GK TW LFE +FFG +K+Y+ + +A
Sbjct: 318 QNSTYNVSQSTKTVIEQELQGGLAITQEIMQGKATWEKLFESSNFFGKYKHYIVLIASAG 377
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPG--------DFSENSVKSSSQCH 414
N D +W G VES++R L+ +ER+ + +YP D SE
Sbjct: 378 NEDDHLKWVGLVESKIRVLVGNLERN-PHIKLAHVYPKSISPSTPLDGSEEEKTDEHSTL 436
Query: 415 YFMGLG-RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLR 465
+F+GL + G + D++ V H V + ++GM+I H++
Sbjct: 437 WFIGLEFQPLGPATNVNLTLDIQFFVNTVHRHSVTI-KLLQEGMKIEAKHVK 487
>gi|194220708|ref|XP_001917579.1| PREDICTED: poly(A) polymerase gamma-like [Equus caballus]
Length = 741
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 233/613 (38%), Positives = 345/613 (56%), Gaps = 47/613 (7%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELTHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTE-SGVALDGSHGLKSGPS 536
P + L +KK K+S S + SSG +S ++ G LD S +G
Sbjct: 497 --PAEILQKKK------------KQSLSDVSRSSSGLQSKRSSLDGSCLDSSRDTDNG-- 540
Query: 537 VEPSTSSVSSSTSASSRPQRPAVSIETEDDNAT----------SVSQAQNFN--QVGATV 584
P S V ST+ S+P P ETE +NA S+ AQ + +GA V
Sbjct: 541 -TPFNSPV--STNKPSKPDVPPAG-ETERNNAEPAAVIVEKPLSIPPAQGLSIPVIGAKV 596
Query: 585 AAALATGTISSFC 597
+A+ + + C
Sbjct: 597 DSAVKAVSPPAVC 609
>gi|417404307|gb|JAA48913.1| Putative polya polymerase [Desmodus rotundus]
Length = 742
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/601 (36%), Positives = 337/601 (56%), Gaps = 22/601 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHYKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRI-EVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPS 536
P + L +KK++ + +V S+ S+ S+ + S T++G +
Sbjct: 497 --PAEILQKKKKQSLSDVNRSSSGPPSKRSSLDGNCLDSSRDTDNGTPFNSPISTN---- 550
Query: 537 VEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISSF 596
+PS +S S SR ++ E + +Q + +GA V + + + +
Sbjct: 551 -KPSKPDISPSGETESRNNSEPAAVIVEKPLSVPPAQGLSIPVIGAKVDSVVKAVSPPAV 609
Query: 597 C 597
C
Sbjct: 610 C 610
>gi|26330928|dbj|BAC29194.1| unnamed protein product [Mus musculus]
Length = 739
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/600 (36%), Positives = 333/600 (55%), Gaps = 23/600 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI ++ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDISESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPTNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKANNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSV 537
P + L +KK+ +V S+ +S+ S+ + S T+SG + P
Sbjct: 497 --PAEILQKKKKSLSDVSRSSGGLQSKRSSLDSTCLDSSRDTDSGTPFN-------SPVS 547
Query: 538 EPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISSFC 597
S+ S T R V++ E + +Q + +GA V + + C
Sbjct: 548 ANKPSNPDSPTGEIERSSAEPVAVVVEKLPSVPPAQGLSIPVIGAKVDPTAKAVSSPAVC 607
>gi|10435509|dbj|BAB14604.1| unnamed protein product [Homo sapiens]
Length = 675
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/601 (36%), Positives = 340/601 (56%), Gaps = 28/601 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS ++P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 22 ISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 81
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 82 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 139
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 140 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 199
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 200 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 259
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 260 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 319
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 320 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 379
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 380 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 438
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 439 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 493
Query: 478 VRPPKSLNEKKRKRI-EVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPS 536
P + L +KK++ + +V S+ +S+ + S S T++G +
Sbjct: 494 --PAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNS--------- 542
Query: 537 VEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISSF 596
P++ S S S + R ++ E + +Q + +GA V + + T + +
Sbjct: 543 --PASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVDSTVKTVSPPTV 600
Query: 597 C 597
C
Sbjct: 601 C 601
>gi|389744511|gb|EIM85694.1| poly-A polymerase [Stereum hirsutum FP-91666 SS1]
Length = 628
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/533 (40%), Positives = 303/533 (56%), Gaps = 59/533 (11%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ + + T L + L +K F SEEE+ R VLGRL +VK ++++V++ +G+
Sbjct: 14 ISTTESSAREKEVTGTLMQELRRQKTFESEEEAKTREIVLGRLAALVKAFVRKVSLSRGL 73
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E A K+FTFGSYRLGV GP +DID LCV P + R +DFF +ML+ET V
Sbjct: 74 S-EAAANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVLR-EDFFDVFEQMLRETEGV 131
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ + VP+A VP++K K +G+ +D L A+L S IP+DL D+LL NLD++ + SL G
Sbjct: 132 TECSGVPEAYVPIVKVKISGIPIDFLMARLALSTIPDDLSLQDDNLLRNLDDRCIRSLGG 191
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVPN+ FR +LRC++ WA+RR IYSN GFLGG+ WA+LVAR+CQLYPNA
Sbjct: 192 SRVTDEILRLVPNVNVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNA 251
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ +VSRFF I W WP PV+L I+ + VW+P+ DR H MPIITP+YP
Sbjct: 252 IAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPGDRSHRMPIITPAYPAM 311
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++NV+++T IM EEF++ ++ +++ G TW LF + FF ++ YLQI + +
Sbjct: 312 CATHNVTASTQMIMTEEFKKGADIVDKVIVGTATWSELFAKHDFFHKYRYYLQIIASTGD 371
Query: 364 AGDFRQWKGWVESRLRQLIHMIE------------------------RDMGGVLQCRLYP 399
+W G VESRLRQL+ +E +M V Q
Sbjct: 372 PALQIKWAGTVESRLRQLVMKLEFVESLQLAHPFIKGFEQISYCLSEEEMRAVAQ----- 426
Query: 400 GDFSENSVK----------SSSQCH---YFMGLG---RKQG-VSPQDGEKFDMRLTVEEF 442
G+ SE + +SQ + +++GL R+ G V P+ K D+ EF
Sbjct: 427 GEVSEAVAQRKKEDIEGKEGASQVYTSTFYIGLAIEARQAGSVGPR---KLDISWPTTEF 483
Query: 443 KSHVVWMYSSWKQ----GMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKR 491
M SW + M I V H++ +PD+VF G R PK KKR +
Sbjct: 484 TK----MVKSWDKFDETKMGIIVRHIKSSTLPDYVFDAGERQPKPALTKKRPK 532
>gi|119620435|gb|EAX00030.1| poly(A) polymerase gamma, isoform CRA_b [Homo sapiens]
Length = 743
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/601 (36%), Positives = 340/601 (56%), Gaps = 28/601 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS ++P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRI-EVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPS 536
P + L +KK++ + +V S+ +S+ + S S T++G +
Sbjct: 497 --PAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNS--------- 545
Query: 537 VEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISSF 596
P++ S S S + R ++ E + +Q + +GA V + + T + +
Sbjct: 546 --PASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVDSTVKTVSPPTV 603
Query: 597 C 597
C
Sbjct: 604 C 604
>gi|16306568|ref|NP_075045.2| poly(A) polymerase gamma [Homo sapiens]
gi|332813224|ref|XP_515496.3| PREDICTED: poly(A) polymerase gamma isoform 6 [Pan troglodytes]
gi|397521664|ref|XP_003830910.1| PREDICTED: poly(A) polymerase gamma [Pan paniscus]
gi|116242699|sp|Q9BWT3.2|PAPOG_HUMAN RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Neo-poly(A) polymerase; Short=Neo-PAP; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|15080911|gb|AAK83701.1|AF312211_1 neo-poly(A) polymerase [Homo sapiens]
gi|15384858|emb|CAC59751.1| poly(A) polymerase gamma [Homo sapiens]
gi|84202581|gb|AAI11702.1| Poly(A) polymerase gamma [Homo sapiens]
gi|88682947|gb|AAI13748.1| Poly(A) polymerase gamma [Homo sapiens]
gi|119620439|gb|EAX00034.1| poly(A) polymerase gamma, isoform CRA_f [Homo sapiens]
gi|189054448|dbj|BAG37221.1| unnamed protein product [Homo sapiens]
gi|410216568|gb|JAA05503.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410265336|gb|JAA20634.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410295358|gb|JAA26279.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410346708|gb|JAA40709.1| poly(A) polymerase gamma [Pan troglodytes]
Length = 736
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/601 (36%), Positives = 340/601 (56%), Gaps = 28/601 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS ++P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRI-EVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPS 536
P + L +KK++ + +V S+ +S+ + S S T++G +
Sbjct: 497 --PAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNS--------- 545
Query: 537 VEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISSF 596
P++ S S S + R ++ E + +Q + +GA V + + T + +
Sbjct: 546 --PASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVDSTVKTVSPPTV 603
Query: 597 C 597
C
Sbjct: 604 C 604
>gi|226494207|ref|NP_766143.2| poly(A) polymerase gamma [Mus musculus]
gi|81885554|sp|Q6PCL9.1|PAPOG_MOUSE RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|37589275|gb|AAH59271.1| Poly(A) polymerase gamma [Mus musculus]
gi|73671773|gb|AAZ80292.1| SRP 3'-adenylating protein [Mus musculus]
gi|148675952|gb|EDL07899.1| poly(A) polymerase gamma, isoform CRA_b [Mus musculus]
Length = 739
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/600 (36%), Positives = 333/600 (55%), Gaps = 23/600 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI ++ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDISESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKANNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSV 537
P + L +KK+ +V S+ +S+ S+ + S T+SG + P
Sbjct: 497 --PAEILQKKKKSLSDVSRSSGGLQSKRSSLDSTCLDSSRDTDSGTPFN-------SPVS 547
Query: 538 EPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISSFC 597
S+ S T R V++ E + +Q + +GA V + + C
Sbjct: 548 ANKPSNPDSPTGEIERSSAEPVAVVVEKLPSVPPAQGLSIPVIGAKVDPTAKAVSSPAVC 607
>gi|13641252|gb|AAK31791.1| SRP RNA 3' adenylating enzyme/pap2 [Homo sapiens]
Length = 736
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/601 (36%), Positives = 340/601 (56%), Gaps = 28/601 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS ++P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLASPEEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQSEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRI-EVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPS 536
P + L +KK++ + +V S+ +S+ + S S T++G +
Sbjct: 497 --PAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNS--------- 545
Query: 537 VEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISSF 596
P++ S S S + R ++ E + +Q + +GA V + + T + +
Sbjct: 546 --PASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVDSTVKTVSPPTV 603
Query: 597 C 597
C
Sbjct: 604 C 604
>gi|281354338|gb|EFB29922.1| hypothetical protein PANDA_016961 [Ailuropoda melanoleuca]
Length = 736
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 221/602 (36%), Positives = 333/602 (55%), Gaps = 25/602 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 22 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 81
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 82 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 139
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 140 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 199
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 200 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 259
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 260 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 319
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 320 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 379
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 380 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 438
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 439 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 493
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSG--QKSSQTESGVALDGSHGLKSGP 535
P + +KK+K+ S +S + S S T++G +
Sbjct: 494 ---PAEILQKKKKQSLSDVSRSSSGPQSKRSSLDSNCLDSSRDTDNGTPFNSPVSTN--- 547
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISS 595
+PS V S A PA I E + +Q + +GA V +A+ + +
Sbjct: 548 --KPSKPDVPPSGEAERNNAEPAAVI-VEKPLSVPPAQGLSIPVIGAKVDSAVKAVSPPA 604
Query: 596 FC 597
C
Sbjct: 605 VC 606
>gi|260803790|ref|XP_002596772.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
gi|229282032|gb|EEN52784.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
Length = 493
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/494 (41%), Positives = 296/494 (59%), Gaps = 18/494 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS S PT D+ +L L +F +EE R+ VLG+L+ +VK+WIK+V++ K +
Sbjct: 13 ISLSEPTKFDIDLNVKLVNTLKPYNVFDTEEGLTHRMVVLGKLNKLVKEWIKQVSLAKNM 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K++TFGSYRLGV G DID LCV P + R DFF + +L++
Sbjct: 73 P-PAIAETVGGKIYTFGSYRLGVHGAGADIDTLCVAPRHVDR-SDFFSSFYEILKDQKET 130
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
D+ V +A VPVIK F+GV +D+L+A+L +PED D ++ LL NLD++ V SLNG
Sbjct: 131 TDIRGVEEAFVPVIKLDFDGVELDILFARLALPQVPEDQDLREEVLLKNLDQRCVRSLNG 190
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD +L LVPN NFR LR ++ WAKRRG+YSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 191 CRVTDEMLHLVPNRENFRLALRAIKLWAKRRGVYSNVLGFLGGVSWAMLVARTCQLYPNA 250
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPI-QYQAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
+ + L+ +FF +F+ W+WP PV+L I + + VWDPR+N DR HLMPIITP+YP
Sbjct: 251 IASTLIHKFFLVFSRWEWPQPVLLKQIDENNRLGFQVWDPRTNPMDRFHLMPIITPAYPQ 310
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK 362
NS+YNVS +T IMQEEF+ ++ +EI GK TW LFEP FFG +K+Y+ + +A
Sbjct: 311 QNSTYNVSLSTRAIMQEEFKIGLQVTQEIFEGKATWDKLFEPGSFFGKYKHYIVLSTSAT 370
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSE-NSVKSSSQCHYFMGLGR 421
+ +W G VES++R LI +ER + + P + N + ++F+GL
Sbjct: 371 SKEHHLEWVGLVESKVRILIGNLER-TAYIALAHVNPKQYPPLNPQEDVFVTNWFIGL-- 427
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHV---VWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGV 478
+ +G D+ ++ F V + K+GM+I +R + + +++
Sbjct: 428 --QFNKIEGGNIDLTFEIQSFTDTVHRQAISNGTLKEGMKIEARSVRRKQLGEYL----- 480
Query: 479 RPPKSLNEKKRKRI 492
PP L K++ +
Sbjct: 481 -PPSLLKFNKKRSL 493
>gi|357621141|gb|EHJ73080.1| poly a polymerase [Danaus plexippus]
Length = 615
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/542 (39%), Positives = 303/542 (55%), Gaps = 51/542 (9%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIK----RVTM 59
IS + P +D+ T EL++ LV +F SE E R+EVLG L +V+ WI+ R M
Sbjct: 37 ISMAGPKPIDIEKTNELKESLVPFGVFESEAEMHHRMEVLGSLHRLVRQWIRDESLRKNM 96
Query: 60 DKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE 119
++D ++TFGSYRLGV DIDALCV P + R D+F + +L+E
Sbjct: 97 PPSVADT-----VGGNIYTFGSYRLGVHHRGADIDALCVAPRHIDR-SDYFQSFYELLKE 150
Query: 120 TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVL 179
P V+DL V DA VPVIK F+G+ +DLL+A+L IP+ D D LL NLD++ V
Sbjct: 151 QPQVKDLRAVEDAFVPVIKMNFDGIEIDLLFARLALKEIPDSFDLRDDMLLKNLDQKCVR 210
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
SLNGCRVTD IL LVP+I FR TLR ++ WAKR GIYSN +G+LGG++WA+LVAR CQL
Sbjct: 211 SLNGCRVTDEILRLVPDINTFRLTLRAIKLWAKRHGIYSNTLGYLGGVSWAMLVARTCQL 270
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
YPNALP L+ +FF +F+ WKWP PV+L P + VWDPR N DR HLMPIITP+
Sbjct: 271 YPNALPATLLHKFFLVFSQWKWPQPVLLKPPDSVNLGFPVWDPRVNMSDRYHLMPIITPA 330
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
YP NS++NVSS+T ++ EEF+ + +EI GK W LFE +FF +K+++ +
Sbjct: 331 YPQQNSTFNVSSSTRTVIMEEFRLGLAITDEIMLGKCGWERLFEAANFFSRYKHFIVLLA 390
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVL-----QC--------------RLYPG 400
++ N D W G VES++R LI +ER+ + +C L PG
Sbjct: 391 SSANTLDQLPWCGLVESKIRHLITTLERNQHITIAHVNPECYNSVPLNTNNGHPLALPPG 450
Query: 401 DFSENSVKSSSQCH-------------YFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVV 447
+ +++ +F+GL V + D+ + F V
Sbjct: 451 TPVQTEEHGAAEVKNDKGEIVANVCSMWFIGL-----VFDKTNVNVDLTYDISSFTKAVH 505
Query: 448 WMYSS---WKQGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKSE 504
+ + ++GM I H+R + + ++ P +R K +N++K + + V + SE
Sbjct: 506 YQAENTNVLREGMTIEARHVRRKQLHQYLSPSLLRREK-VNKRKNETLAVHTKKAKRVSE 564
Query: 505 SS 506
SS
Sbjct: 565 SS 566
>gi|301783573|ref|XP_002927202.1| PREDICTED: poly(A) polymerase gamma-like [Ailuropoda melanoleuca]
Length = 739
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 221/602 (36%), Positives = 333/602 (55%), Gaps = 25/602 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSG--QKSSQTESGVALDGSHGLKSGP 535
P + +KK+K+ S +S + S S T++G +
Sbjct: 497 ---PAEILQKKKKQSLSDVSRSSSGPQSKRSSLDSNCLDSSRDTDNGTPFNSPVSTN--- 550
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISS 595
+PS V S A PA I E + +Q + +GA V +A+ + +
Sbjct: 551 --KPSKPDVPPSGEAERNNAEPAAVI-VEKPLSVPPAQGLSIPVIGAKVDSAVKAVSPPA 607
Query: 596 FC 597
C
Sbjct: 608 VC 609
>gi|297667577|ref|XP_002812053.1| PREDICTED: poly(A) polymerase gamma [Pongo abelii]
Length = 736
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/600 (36%), Positives = 335/600 (55%), Gaps = 26/600 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS ++P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSV 537
P + L +KK++ + + S SS S + + D +G P
Sbjct: 497 --PAEILQKKKKQSLSDV-------SRSSGGLQSKRSSLDSSCLDSSRDTDNGT---PFN 544
Query: 538 EPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISSFC 597
P++ S S S + R ++ E + +Q + +GA V + + + + C
Sbjct: 545 SPASKSDSPSVGETERNSAEPAAVIVEKPLSLPPAQGLSIPVIGAKVDSTVKAVSPPAVC 604
>gi|198433414|ref|XP_002124981.1| PREDICTED: similar to Poly(A) polymerase gamma (PAP-gamma)
(Polynucleotide adenylyltransferase gamma) (SRP RNA
3-adenylating enzyme) (Neo-poly(A) polymerase) (Neo-PAP)
[Ciona intestinalis]
Length = 833
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/480 (41%), Positives = 291/480 (60%), Gaps = 18/480 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT D + T++L + + +F SE E R VLG+L+ IVK+++ V+ ++ +
Sbjct: 14 ISLAEPTEKDRVLTEKLIEHIEPYGVFESESEHSARRIVLGKLNEIVKEFVMNVSEERKL 73
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I A KL+TFGSYRLGV DID LCV P + R DFF +L+E V
Sbjct: 74 P-QSLIDTAGGKLYTFGSYRLGVCAKGADIDTLCVVPRHVNR-SDFFSVFCTLLKERSEV 131
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L + DA VPVIK KF GV +D+L+++L V+P D D DSLL NLD + + SLNG
Sbjct: 132 SELRAIEDAFVPVIKLKFEGVEIDILFSRLALQVVPPDQDLRDDSLLKNLDIRCIRSLNG 191
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR+GIYSN +G+LGG++WA+LVAR CQLYPNA
Sbjct: 192 CRVTDEILHLVPNIENFRLTLRVIKLWAKRKGIYSNMLGYLGGVSWAMLVARTCQLYPNA 251
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLC-PIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
+ + LV RFF +F+ W+WP PV+L P + + VWDPR N DR HLMPIITP+YP
Sbjct: 252 IASTLVQRFFWVFSQWEWPRPVLLKQPEESNTLNLPVWDPRYNPSDRLHLMPIITPAYPQ 311
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK 362
NS+YNV+ ++L +M+ EF + EI K +W+ L E +FF +K+++ + +A+
Sbjct: 312 QNSTYNVTRSSLTVMKGEFIDGYRVTAEIHENKSSWLKLLETPNFFNEYKHFIVLMASAE 371
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERD---MGGVLQCRLYPGDFSENSVKSSSQCHYFMGL 419
+ +F W G VES++R L+ +ER+ + + YP + E V ++ +F+GL
Sbjct: 372 SQENFNLWTGLVESKIRILVGYLERNDYILIAHINQTGYPQEVKEKDVTTAYVNRWFLGL 431
Query: 420 G-RKQGVS-----PQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFV 473
K +S D + F L + S V +K+GM++ ++ R +P ++
Sbjct: 432 RFVKDLISTNINLTHDIQAFTDTLHRQAHNSKV------FKEGMKVEATYSRRSQLPKYL 485
>gi|395508015|ref|XP_003758311.1| PREDICTED: poly(A) polymerase gamma [Sarcophilus harrisii]
Length = 763
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/563 (37%), Positives = 327/563 (58%), Gaps = 21/563 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS ++P +D I T++L + + +F EEE R+ VLG+L+ +VK+WI ++ K +
Sbjct: 39 ISLASPKEIDHIYTQKLIEAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISELSESKNL 98
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 99 P-PSVVANVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 156
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L + DA VPV+KF+F+G+ +DL++A+L + ++LD DS L +LD + + SLNG
Sbjct: 157 RNLRAIEDAYVPVVKFEFDGIEIDLVFARLAIQTVSDNLDLRDDSRLRSLDIRCIRSLNG 216
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 217 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 276
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 277 AASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 336
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + EI GK W L EP +FF +++Y+ + +A
Sbjct: 337 NSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 396
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ +S +F+G+
Sbjct: 397 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHYKESDYVSMWFLGII 455
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 456 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 510
Query: 478 VRPPKSLNEKKRKRIEVIE--STKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
P + L +KK++ ++ I ++ L+ SS G+ S T++G + L P
Sbjct: 511 --PAEILQKKKKQSLQDINRSASGLQSKRSSLDGNCL-DSSRDTDNGTPFNSPVLLNKHP 567
Query: 536 SVEPSTSSVSSSTSASSRPQRPA 558
+P + V S+ + P A
Sbjct: 568 --KPESPPVVEMESSCAEPDETA 588
>gi|148675951|gb|EDL07898.1| poly(A) polymerase gamma, isoform CRA_a [Mus musculus]
Length = 650
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/529 (39%), Positives = 312/529 (58%), Gaps = 16/529 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI ++ K +
Sbjct: 82 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDISESKNL 141
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 142 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 199
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 200 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 259
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 260 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 319
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 320 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 379
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 380 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 439
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 440 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKANNYVSMWFLGII 498
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K GM+I +H++ + + ++
Sbjct: 499 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL---- 553
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALD 526
P + L +KK+ +V S+ +S+ S+ + S T+SG +
Sbjct: 554 --PAEILQKKKKSLSDVSRSSGGLQSKRSSLDSTCLDSSRDTDSGTPFN 600
>gi|354473991|ref|XP_003499215.1| PREDICTED: poly(A) polymerase gamma [Cricetulus griseus]
Length = 739
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 223/600 (37%), Positives = 333/600 (55%), Gaps = 23/600 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI ++ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDISESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ N + +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHNKANNYVSM-WFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHV---VWMYSSWKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V +G D+ ++ F V + + K GM+I +H++ + + ++
Sbjct: 442 FRR-VEHAEGVNIDLTYDIQSFTDTVYRQANIINMLKDGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSV 537
P + L +KK+ +V + +S+ S+ S S T+SG + S S
Sbjct: 497 --PAEILQKKKKSLSDVSRISGGLQSKRSSLDSSCLDSSRDTDSGTPFN------SPVST 548
Query: 538 EPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISSFC 597
++ S S A PA I E + +Q + +GA V + + S C
Sbjct: 549 NKPSNPDSPSGEAERNSTEPATVI-VEKLPSVPPAQGLSIPVIGAKVDPTVKAVSSPSVC 607
>gi|209878111|ref|XP_002140497.1| poly(A) polymerase protein [Cryptosporidium muris RN66]
gi|209556103|gb|EEA06148.1| poly(A) polymerase protein, putative [Cryptosporidium muris RN66]
Length = 647
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/489 (41%), Positives = 299/489 (61%), Gaps = 31/489 (6%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS S PT D T++L + E L+ + E R ++L L+ +V++WI +++ +
Sbjct: 30 ISESLPTPQDYKLTEQLIIAMRSENLYETVEGMKKREQILASLNKMVREWIYEASLEHSM 89
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S+EE + A ++TFGSYRLGV +DID LC+ P + TR D FF LQ+ +
Sbjct: 90 SEEESLT-AGGGIYTFGSYRLGVVAAGSDIDTLCIVPRHITR-DSFFTFFLAKLQQDIHI 147
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ PVPDA P+IK + G+ +DLL+A L S IP DL++L D LL N+DE+T SLNG
Sbjct: 148 TKIQPVPDAYTPIIKMVYYGIEMDLLFACLNLSRIPSDLNTLDDDLLRNVDEKTARSLNG 207
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D IL LVPN +FR+ LR ++ W+K RGIYSN +G+LGGI+WA+L AR+CQLYPN+
Sbjct: 208 CRVNDMILQLVPNKESFRTALRFVKHWSKSRGIYSNVLGYLGGISWAILTARICQLYPNS 267
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQY------QAMPHHVWDPRSNQRDRKHLMPIIT 297
PN +++RFF ++ W+W NPV+LC I+ M VW+P +N +DR HLMPIIT
Sbjct: 268 APNQIINRFFYVYKAWQWKNPVILCEIKEVPKNSPGLMGFRVWNPNTNPQDRAHLMPIIT 327
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQI 357
P++P NS++NV+ TTLR++ EE QR EL +EIE + W L+ PY FF + K+++Q+
Sbjct: 328 PAFPSMNSTHNVTQTTLRVITEELQRGSELVKEIENERAQWSDLWSPYMFFENHKHFIQV 387
Query: 358 HIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSS----SQC 413
+ A + F++W GW+ES++R L+ +E G LQ R +P E+ + +QC
Sbjct: 388 KMLANSEQAFQKWTGWIESKIRFLVRKLETFKG--LQVRPWPKVIQESDNQKDGFQFAQC 445
Query: 414 HYFMGL----------GRKQGVSPQDGEKFDMRLTVEEFKSHVV-WM-YSSWKQGMQIHV 461
Y +GL G+ G++P D+R + +F ++ W +K + + V
Sbjct: 446 MY-IGLVLCTTSGNNNGKSTGITP----VVDLRGAILDFVGFIMNWNEVEIYKDSIDLKV 500
Query: 462 SHLRCQDIP 470
HLR +D+P
Sbjct: 501 KHLRFKDLP 509
>gi|344245697|gb|EGW01801.1| Poly(A) polymerase gamma [Cricetulus griseus]
Length = 709
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 223/600 (37%), Positives = 333/600 (55%), Gaps = 23/600 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI ++ K +
Sbjct: 17 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDISESKNL 76
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 77 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 134
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 135 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 194
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 195 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 254
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 255 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 314
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 315 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 374
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ N + +F+G+
Sbjct: 375 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHNKANNYVSM-WFLGII 433
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHV---VWMYSSWKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V +G D+ ++ F V + + K GM+I +H++ + + ++
Sbjct: 434 FRR-VEHAEGVNIDLTYDIQSFTDTVYRQANIINMLKDGMKIEATHVKKKQLHHYL---- 488
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSV 537
P + L +KK+ +V + +S+ S+ S S T+SG + S S
Sbjct: 489 --PAEILQKKKKSLSDVSRISGGLQSKRSSLDSSCLDSSRDTDSGTPFN------SPVST 540
Query: 538 EPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISSFC 597
++ S S A PA I E + +Q + +GA V + + S C
Sbjct: 541 NKPSNPDSPSGEAERNSTEPATVI-VEKLPSVPPAQGLSIPVIGAKVDPTVKAVSSPSVC 599
>gi|348563534|ref|XP_003467562.1| PREDICTED: poly(A) polymerase gamma [Cavia porcellus]
Length = 741
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/571 (38%), Positives = 327/571 (57%), Gaps = 33/571 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSV 537
P + L +KK++ + + S SS S + + D +G
Sbjct: 497 --PAEILQKKKKQNLSDV-------SRSSGGLQSKRSSLDSSCLDSSRDTDNG------- 540
Query: 538 EPSTSSVSSSTSASSRPQRPAVSIETEDDNA 568
P S V ST+ S+P+ PA ET+ ++A
Sbjct: 541 TPFNSPV--STNKPSKPESPAAG-ETDRNSA 568
>gi|392568430|gb|EIW61604.1| poly-A polymerase [Trametes versicolor FP-101664 SS1]
Length = 652
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 237/628 (37%), Positives = 343/628 (54%), Gaps = 65/628 (10%)
Query: 18 KELEKILVDE----KLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEAN 73
KE+ L++E F SE E+ R VLGRL +VK ++ +V++ +G+S E A
Sbjct: 33 KEVTVTLLEELRRQGTFESEAEAKTREIVLGRLAALVKKFVHQVSLSRGLS-EAAATAAG 91
Query: 74 AKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDAR 133
K+FTFGSYRLGV GP +DID LCV P + +R +DFF ML+ET V +++ VPDA
Sbjct: 92 GKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSR-EDFFDVFEDMLKETEGVIEVSGVPDAY 150
Query: 134 VPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSL 193
VP+IK K +G+ +DL+ A+L S I +DL D+LL NLDE+ V SLNG RVTD IL L
Sbjct: 151 VPIIKTKISGIPIDLVMARLALSTISDDLSLQDDNLLRNLDERCVRSLNGSRVTDEILRL 210
Query: 194 VPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFF 253
VPN+ FR+ LRC++ WA+RR IYSN GFLGG+ WA+LVAR+CQLYPNA+ +VSRFF
Sbjct: 211 VPNVTVFRNALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNAIAGAIVSRFF 270
Query: 254 KIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTT 313
I W WP PVML PI+ +P VW+P+ DR H MPIITP+YP +++NV+ +T
Sbjct: 271 IIMYQWTWPQPVMLKPIEDGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATHNVTQST 330
Query: 314 LRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFR-QWKG 372
IM EEF++A ++ + I GK +W LF + FF ++ YLQ+ IA+ D + +W G
Sbjct: 331 QMIMTEEFKKASDIVDNIIVGKASWSDLFAKHDFFHKYRYYLQV-IASTGGPDVQIKWSG 389
Query: 373 WVESRLRQLIHMIE------------RDMGGVLQC-------RLYPGDFSENSVKSSSQ- 412
VESR+RQL+ +E + V C + G+ SE K +
Sbjct: 390 TVESRIRQLVMKLEYVESLALAHPFIKGFEQVSYCLTDEEVRAVAQGEISEAIAKRKKED 449
Query: 413 ------------CHYFMGL---GRKQG-VSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQG 456
+++GL R+ G V P+ + D+ EF + +V M+ + +
Sbjct: 450 IEGVEGGSAVYSTTFYIGLVVEPRQPGSVGPR---RLDISYPTTEF-TKLVKMWEKFDEN 505
Query: 457 -MQIHVSHLRCQDIPDFVFPGGVRPP----KSLNEKKRKRIEV----IESTKLKKSESST 507
M I V H+R +PD+VF G R P K N K R + + K + +++T
Sbjct: 506 KMGIVVRHIRSAILPDYVFDEGERQPRLAQKRPNTKTTDRFNNTSPDVPNKKARLVQNTT 565
Query: 508 AGHSSG-----QKSSQTESGVALDGSHGLKSGPSVEPSTSSVSSSTSASSRPQRPAVSIE 562
A G + S +E+ + LK+ + S ++++T RP A + +
Sbjct: 566 APFRHGCMLMLYRHSMSETSAVVPPHEALKNAENGINSLPHINTAT-VVERPPSSAAAYK 624
Query: 563 TEDDNATSVSQAQNFNQVGATVAAALAT 590
+ + + Q G VA A AT
Sbjct: 625 SPIKEPSQIKSPQLPR--GENVAVATAT 650
>gi|198459613|ref|XP_001361433.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
gi|198136742|gb|EAL26011.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
Length = 902
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/588 (37%), Positives = 327/588 (55%), Gaps = 58/588 (9%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T+ L L +F S+EE R+E+L +L+ +VK W+K +++ K +
Sbjct: 46 ISLAEPKPADLQRTENLRASLEPFNVFESQEELNHRMEILAKLNTLVKQWVKEMSVSKNM 105
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ K++TFGSYRLGV DIDALCV P R D+F F +L++ P V
Sbjct: 106 P-ESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIER-ADYFQSFFEVLKKQPEV 163
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ V +A VPVIK F+G+ +DLL+A+L IP+D D D+LL NLD ++V SLNG
Sbjct: 164 TECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNG 223
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL+LVPNI NFR LR ++ WAK+ GIYSN++G+ GG+ WA+LVAR CQLYPNA
Sbjct: 224 CRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNA 283
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
LV +FF +F+ WKWPNPV+L + VWDPR N DR HLMPIITP+YP
Sbjct: 284 TAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQ 343
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T ++M EF R + +EI G+ +W LFE FF +++++ + + ++
Sbjct: 344 NSTFNVSESTKKVMLTEFTRGMNITDEIMLGRASWERLFEAPSFFYRYRHFIVLLVNSQT 403
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL-----QC-RLYPGDFSEN------------ 405
A D +W G VES++R LI +ER+ L +C L G+ + N
Sbjct: 404 ADDHLEWCGLVESKIRLLIGNLERNPHIALAHVNPKCFELKKGESANNSQNNSGNEDDLK 463
Query: 406 -------SVKSSSQCH-YFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWM---YSSWK 454
SV S+ C +F+GL ++ + D+ +++ F HV+ K
Sbjct: 464 QPPPNQASVTSAPFCSMWFIGLEFERS----ENLNVDLTESIQNFTEHVIMHGVNIKMLK 519
Query: 455 QGMQIHVSHLRCQDIPDFVFPGGV-RPPKSLNEK---------KRKRIEVIESTKLKKSE 504
+GM I H++ + + ++ + R KS+ RKR+ ST+L +S+
Sbjct: 520 EGMAIDARHVKRKQLTVYLDADFLKRERKSMESHTSFNNTLLANRKRL----STELAQSQ 575
Query: 505 SSTAGHSSGQKSSQTESGVALDGSHGLKSGPSVEPSTSSVSSSTSASS 552
+ S Q +S G+ G +SG + + S++ S +S
Sbjct: 576 EALPPGSQTQLAS---------GNRGRESGAKIHRLSESLTEDNSNAS 614
>gi|126303830|ref|XP_001375093.1| PREDICTED: poly(A) polymerase gamma [Monodelphis domestica]
Length = 748
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/563 (37%), Positives = 325/563 (57%), Gaps = 21/563 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS ++P +D I T++L + + +F EEE R+ VLG+L+ +VK+WI ++ K +
Sbjct: 24 ISLASPKEIDHIYTQKLIEAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISELSESKNL 83
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 84 P-PSVVANVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 141
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L + DA VPV+KF+F+G+ +DL++A+L + ++LD DS L +LD + + SLNG
Sbjct: 142 RNLRAIEDAYVPVVKFEFDGIEIDLVFARLAIQTVSDNLDLRDDSRLRSLDIRCIRSLNG 201
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 202 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 261
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 262 AASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 321
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + EI GK W L EP +FF +++Y+ + +A
Sbjct: 322 NSTYNVSTSTRTVMVEEFKQGLAVTNEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 381
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ +S +F+G+
Sbjct: 382 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHYKESDYVSMWFLGII 440
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 441 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 495
Query: 478 VRPPKSLNEKKRKRIEVIE--STKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
P + +KK++ ++ I ++ L+ SS G+ S T++G + L P
Sbjct: 496 --PAEIFQKKKKQSLQDINRSASGLQSKRSSLDGNCL-DSSRDTDNGTPFNSPVLLNKHP 552
Query: 536 SVEPSTSSVSSSTSASSRPQRPA 558
+P + V S + P A
Sbjct: 553 --KPESPPVVEMESNCAEPDETA 573
>gi|195124015|ref|XP_002006489.1| GI18544 [Drosophila mojavensis]
gi|193911557|gb|EDW10424.1| GI18544 [Drosophila mojavensis]
Length = 664
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 218/586 (37%), Positives = 326/586 (55%), Gaps = 54/586 (9%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T+EL K L +F ++EE R+E+L +L+ +VK W+K +++ K +
Sbjct: 34 ISLAEPRAEDLQRTEELSKSLEPYNVFETQEELNHRMEILAKLNTLVKQWVKDISVSKNM 93
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ K++TFGSYRLGV DIDALCV P R D+F F +L++ P V
Sbjct: 94 P-EAAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIER-SDYFQSFFEILKKQPEV 151
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ V +A VPVIK F+GV +DLL+A+L IP+D D D+LL NLD ++V SLNG
Sbjct: 152 TECRSVEEAFVPVIKMNFDGVEIDLLFARLSLKEIPDDFDLRDDNLLKNLDPRSVRSLNG 211
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL+LVPNI NFR LR ++ WAKR GIYSN++G+ GG+ WA+LVAR CQLYPNA
Sbjct: 212 CRVTDEILALVPNIENFRLALRAIKLWAKRHGIYSNSLGYFGGVTWAMLVARTCQLYPNA 271
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
LV +FF +F+ WKWPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 272 AAATLVHKFFLVFSRWKWPNPVLLKHLDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQ 331
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T +++ EF R + +EI G+ W LFE FF +++++ + + ++
Sbjct: 332 NSTFNVSESTKKVILTEFNRGMSITDEIMLGRVGWDRLFEAPSFFYRYRHFIVLLVNSQT 391
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL-----QC-RLYPGDFSEN------------ 405
A D +W G VES++R LI +ER VL +C L G + N
Sbjct: 392 ADDHLEWCGLVESKVRLLIGNLERIPHIVLAHVNPKCFELKKGAATANNSQNNSGNEDDL 451
Query: 406 -------SVKSSSQCH-YFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWM---YSSWK 454
+V ++ C +F+GL ++ + D+ +++ F HV K
Sbjct: 452 KQQSAQAAVTTAPYCSLWFIGLEFERS----ENLNIDLTESIQNFTEHVNMHGVNIKMLK 507
Query: 455 QGMQIHVSHLRCQDIPDFVFPGGV-RPPKSLNEK---------KRKRIEVIESTKLKKSE 504
+GM I H++ + + ++ + R KS+ KRKR+ S++L +S+
Sbjct: 508 EGMSIVARHVKRKQLSVYLDADFLKRERKSMENHNNFNNSMMAKRKRL----SSELAQSQ 563
Query: 505 -----SSTAGHSSGQKSSQTESGVALDGSHGLKSGPSVEPSTSSVS 545
++ G SG K + + + S+ V P+T + +
Sbjct: 564 EQVPPTNPRGRDSGNKVQRLSESLTEENSNASSEMGGVTPTTPTAA 609
>gi|73969700|ref|XP_852387.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Canis lupus
familiaris]
Length = 738
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 230/612 (37%), Positives = 341/612 (55%), Gaps = 45/612 (7%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVT+ IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTNEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSV 537
P + +KK+K+ S +S K S +S LD S +G
Sbjct: 497 ---PAEILQKKKKQSLSDVSRSSSGPQS---------KRSSLDSN-CLDSSRDTDNG--- 540
Query: 538 EPSTSSVSSSTSASSRPQRPAVSIETEDDNAT----------SVSQAQNFN--QVGATVA 585
P S V S + S+P P S ETE +NA SV AQ + +GA V
Sbjct: 541 TPFNSPV--SINKPSKPDLPP-SGETERNNAEPTAVVVEKPLSVPPAQGLSIPVIGAKVD 597
Query: 586 AALATGTISSFC 597
+A+ + + C
Sbjct: 598 SAVKAVSPPAVC 609
>gi|395829706|ref|XP_003787987.1| PREDICTED: poly(A) polymerase gamma [Otolemur garnettii]
Length = 741
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/601 (35%), Positives = 339/601 (56%), Gaps = 23/601 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EEHQLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKRI-EVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPS 536
P + L +KK++ + +V S+ S+ S+ + S T++G + + +
Sbjct: 497 --PAEILQKKKKQSLSDVSRSSGGLPSKRSSLDSNCLDSSRDTDNGTPFNSP--VSTNKF 552
Query: 537 VEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISSF 596
+P + S + + + P ++ E + +Q + +GA V + + + +
Sbjct: 553 SKPDSPSAGETERSIAEP----AAVIVEKPQSIPPAQGLSIPVIGAKVDSTVKAVSTPAV 608
Query: 597 C 597
C
Sbjct: 609 C 609
>gi|195151552|ref|XP_002016711.1| GL11728 [Drosophila persimilis]
gi|194110558|gb|EDW32601.1| GL11728 [Drosophila persimilis]
Length = 904
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/588 (37%), Positives = 326/588 (55%), Gaps = 58/588 (9%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T+ L L +F S+EE R+E+L +L+ +VK W+K +++ K +
Sbjct: 47 ISLAEPKPADLQRTENLRASLEPFNVFESQEELNHRMEILAKLNTLVKQWVKEMSVSKNM 106
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ K++TFGSYRLGV DIDALCV P R D+F F +L++ P V
Sbjct: 107 P-ESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIER-ADYFQSFFEVLKKQPEV 164
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ V +A VPVIK F+G+ +DLL+A+L IP+D D D+LL NLD ++V SLNG
Sbjct: 165 TECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNG 224
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL+LVPNI NFR LR ++ WAK+ GIYSN++G+ GG+ WA+LVAR CQLYPNA
Sbjct: 225 CRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNA 284
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
LV +FF +F+ WKWPNPV+L + VWDPR N DR HLMPIITP+YP
Sbjct: 285 TAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQ 344
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T ++M EF R + +EI G+ +W LFE FF +++++ + + ++
Sbjct: 345 NSTFNVSESTKKVMLTEFTRGMNITDEIMLGRASWERLFEAPSFFYRYRHFIVLLVNSQT 404
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL-----QC-RLYPGDFSEN------------ 405
A D +W G VES++R LI +ER+ L +C L G+ + N
Sbjct: 405 ADDHLEWCGLVESKIRLLIGNLERNPHIALAHVNPKCFELKKGESANNSQNNSGNEDDLK 464
Query: 406 -------SVKSSSQCH-YFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWM---YSSWK 454
SV S+ C +F+GL ++ + D+ +++ F HV+ K
Sbjct: 465 QPPPNQASVTSAPFCSMWFIGLEFERS----ENLNVDLTESIQNFTEHVIMHGVNIKMLK 520
Query: 455 QGMQIHVSHLRCQDIPDFVFPGGV-RPPKSLNEK---------KRKRIEVIESTKLKKSE 504
+GM I H++ + + ++ + R KS+ RKR+ ST+L +S+
Sbjct: 521 EGMAIDARHVKRKQLTVYLDADFLKRERKSMESHTSFNNTLLANRKRL----STELAQSQ 576
Query: 505 SSTAGHSSGQKSSQTESGVALDGSHGLKSGPSVEPSTSSVSSSTSASS 552
+ S Q +S G+ G SG + + S++ S +S
Sbjct: 577 EALPPGSQTQLAS---------GNRGRDSGAKIHRLSESLTEDNSNAS 615
>gi|195380742|ref|XP_002049128.1| GJ21414 [Drosophila virilis]
gi|194143925|gb|EDW60321.1| GJ21414 [Drosophila virilis]
Length = 880
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 218/601 (36%), Positives = 330/601 (54%), Gaps = 63/601 (10%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T+EL K L +F S++E R+E+L +L+ +VK W+K +++ K +
Sbjct: 45 ISLAEPRAEDLQRTEELSKSLEPYNVFESQDELNHRMEILAKLNTLVKQWVKEISVSKNM 104
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ K++TFGSYRLGV DIDALCV P R D+F F +L++ P V
Sbjct: 105 P-EAAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIER-TDYFQSFFEVLKKQPEV 162
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ V +A VPVIK F+G+ +DLL+A+L IP+D D D+LL NLD ++V SLNG
Sbjct: 163 TECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLKNLDPRSVRSLNG 222
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL+LVPNI NFR LR ++ WAK+ GIYSN++G+ GG+ WA+LVAR CQLYPNA
Sbjct: 223 CRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNA 282
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
LV +FF +F+ WKWPNPV+L + VWDPR N DR HLMPIITP+YP
Sbjct: 283 AAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFPVWDPRVNASDRYHLMPIITPAYPQQ 342
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T +++ EF R + +EI G+ +W LFE FF +++++ + + ++
Sbjct: 343 NSTFNVSESTKKVILTEFNRGMSITDEIMLGRVSWDRLFEAPSFFYRYRHFIVLLVNSQT 402
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL-----QC-RLYPGDFSENSVKSSSQCH--- 414
A D +W G VES++R LI +ER+ VL +C L G S N+ +++S
Sbjct: 403 ADDHLEWCGLVESKVRLLIGNLERNPHIVLAHVNPKCFELKKGAASANNSQNNSGNEEDL 462
Query: 415 --------------------YFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWM---YS 451
+F+GL ++ + D+ +++ F HV+
Sbjct: 463 KQQQQQPAQTAVTTAPFCSLWFIGLEFERS----ENLNIDLTESIQNFTEHVIMHGLNIK 518
Query: 452 SWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEV-IESTKLKKSESSTAGH 510
K+GM I HL KRK++ + +++ LK+ S H
Sbjct: 519 MLKEGMAIDARHL-----------------------KRKQLSLYLDADFLKRERKSMESH 555
Query: 511 SSGQKS-SQTESGVALDGSHGLKSGPSVEPSTSSVSSSTSASSRPQRPAVSIETEDDNAT 569
++ + ++ + + P V+ +TSS S + QR + S+ ++ NA+
Sbjct: 556 NNFNNTLLANRKRLSSELAQSQDPLPPVQQTTSSNRGRDSGGVKRQRLSESLIEDNSNAS 615
Query: 570 S 570
S
Sbjct: 616 S 616
>gi|443716054|gb|ELU07731.1| hypothetical protein CAPTEDRAFT_223399 [Capitella teleta]
Length = 657
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/562 (38%), Positives = 325/562 (57%), Gaps = 22/562 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + P D+ +K+LEK + +F +EEE R+EVL +++ +VK WI+ V++ K +
Sbjct: 25 LSLAPPKEHDLELSKKLEKEMAPYGVFETEEEQAHRMEVLNKVNILVKAWIRDVSLSKSM 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E I+ ++TFGSYRLGV DID LCV P + R DFFG F L++ P V
Sbjct: 85 P-ESLIEVVGGGVYTFGSYRLGVNTKGADIDTLCVAPRHVLR-SDFFGSFFESLKQHPEV 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+D V +A VPVIK +F+G+ +D+L+A+L V+ E+ + +SLL NLD + + SLNG
Sbjct: 143 KDCRAVEEAFVPVIKMEFDGIELDMLFARLALQVVEENQNLRDESLLKNLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI +FR TLR ++ WAK++GIYSNA+GFLGG++WA+LVAR CQLYP+A
Sbjct: 203 CRVTDEILHLVPNIESFRMTLRAVKLWAKKKGIYSNALGFLGGVSWAMLVARTCQLYPHA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQ-AMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
P L+ +FF +F+ W WP PV+L + + + H VWDPR N DR HLMPIITP+YP
Sbjct: 263 CPATLLQKFFMLFSKWDWPAPVLLKQMSDENKLSHTVWDPRVNVSDRFHLMPIITPAYPQ 322
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK 362
NS+YNVS++T +IM +EF+ A + + A K W +LF+P FF +K+Y+ + +A
Sbjct: 323 QNSTYNVSNSTRQIMMDEFKEALVVANNVYANKDEWGSLFQPSDFFQKYKHYI-VLVARS 381
Query: 363 NAGDFR-QWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQ-CHYFMGLG 420
+ D + +W G VES++R L+ +E++ + + P F N S +F+GL
Sbjct: 382 DTEDHQLEWVGLVESKIRILVGNLEKN-PFICIAHVNPKSFGPNEDDESPYIAKWFVGLI 440
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHV---VWMYSSWKQGMQIHVSHLRCQDIPDFVFPGG 477
K G D+ ++ F V + K+GM++ V H + + +
Sbjct: 441 FKTGTQ----TNIDLTYDIQNFMDIVYRQALTINLLKKGMEVEVKHSKSES--EDSTTKR 494
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSV 537
+ P KS + R+ E +ST L S + G S + TE + + + + V
Sbjct: 495 LVPCKSDSFLLRQDSEA-DSTVLPDSSLAKEGDSQDSLARTTELNLQVTDNSSV-----V 548
Query: 538 EPSTSSVSSSTSASSRPQRPAV 559
+ + SS S S RP P +
Sbjct: 549 DSTAQGDSSCDSTSKRPHSPTL 570
>gi|395329949|gb|EJF62334.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 628
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/512 (40%), Positives = 301/512 (58%), Gaps = 43/512 (8%)
Query: 18 KELEKILVDE----KLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEAN 73
KE+ + L++E F SE+ES R VLGR+ +VK ++ V + +G+SD A
Sbjct: 29 KEVTRTLLEELKRQGTFESEDESKTREIVLGRIAALVKKFVHTVALREGLSDAAATA-AG 87
Query: 74 AKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDAR 133
K+FTFGSYRLGV GP +DID LCV P + +R +DFF ML++ V +++ VPDA
Sbjct: 88 GKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSR-EDFFDVFEHMLKDAEGVAEVSGVPDAY 146
Query: 134 VPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSL 193
VP+IK K +G+ +DL+ A+L S IP+DL D+LL NLD++ V SLNG RVTD IL L
Sbjct: 147 VPIIKIKMSGIPIDLVMARLALSTIPDDLSLQDDNLLRNLDDRCVRSLNGSRVTDEILRL 206
Query: 194 VPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFF 253
VPN+ FR +LRC++ WA+RR IYSN GFLGG+ WA+LVAR+CQLYPNA+ +VSRFF
Sbjct: 207 VPNVSVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNAVAGAIVSRFF 266
Query: 254 KIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTT 313
I W WP PV+L I+ +P VW+P+S DR H MPIITP+YP +++NV+ +T
Sbjct: 267 IIMYQWAWPQPVLLKQIEDGPLPVRVWNPKSYPADRAHRMPIITPAYPSMCATHNVTQST 326
Query: 314 LRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFR-QWKG 372
IM EEF++A E+ +++ K +W LF + FF ++ YLQ+ IA+ + + + +W G
Sbjct: 327 QMIMTEEFKKASEIVDKVIINKASWSDLFARHDFFHKYRYYLQV-IASTGSPELQVKWSG 385
Query: 373 WVESRLRQLIHMIERDMGGVLQCRLYPG------DFSENSVKSSSQCHYFMGLGRK---- 422
VESR+RQL+ +E L G ++ V+S +Q + R+
Sbjct: 386 TVESRVRQLVMKLEYVESLALAHPFIKGFEQVSYCINDEEVRSVAQGEVSEAVARRKKED 445
Query: 423 ----QGVSPQDGEKFDMRLTVE-------------------EFKSHVVWMYSSW-KQGMQ 458
+G S F + L VE EF + +V M+ + +Q M
Sbjct: 446 IEGIEGASAVYSTTFYIGLAVEPKQPGAVGPRRLDISYPTTEF-TKLVKMWEKFDEQKMG 504
Query: 459 IHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRK 490
I V H++ +P++VF G R P+ ++ +K
Sbjct: 505 IVVRHIKSSALPEYVFDDGERQPRLAQKRPKK 536
>gi|355565713|gb|EHH22142.1| hypothetical protein EGK_05354, partial [Macaca mulatta]
gi|355751336|gb|EHH55591.1| hypothetical protein EGM_04830, partial [Macaca fascicularis]
Length = 733
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/494 (40%), Positives = 298/494 (60%), Gaps = 17/494 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 22 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 81
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 82 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 139
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 140 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 199
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 200 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 259
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 260 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 319
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 320 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 379
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 380 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 438
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 439 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 493
Query: 478 VRPPKSLNEKKRKR 491
P + +KK+K+
Sbjct: 494 ---PAEILQKKKKQ 504
>gi|383413715|gb|AFH30071.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/494 (40%), Positives = 298/494 (60%), Gaps = 17/494 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKR 491
P + +KK+K+
Sbjct: 497 ---PAEILQKKKKQ 507
>gi|194755527|ref|XP_001960043.1| GF13172 [Drosophila ananassae]
gi|190621341|gb|EDV36865.1| GF13172 [Drosophila ananassae]
Length = 835
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 220/588 (37%), Positives = 327/588 (55%), Gaps = 61/588 (10%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T+EL L +F S++E R+E+L +L+ +VK W+K +++ K +
Sbjct: 35 ISLAEPRPEDLQRTEELRGSLEPYNVFESQDELNHRMEILAKLNTLVKQWVKEISVSKNM 94
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ K++TFGSYRLGV DIDALCV P R D+F F +L++ P V
Sbjct: 95 P-ESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIER-TDYFQSFFEVLKKQPEV 152
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ V +A VPVIK F+G+ +DLL+A+L IP+D D D+LL NLD ++V SLNG
Sbjct: 153 TECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNG 212
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL+LVPNI NFR LR ++ WAK+ GIYSN++G+ GG+ WA+LVAR CQLYPNA
Sbjct: 213 CRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNA 272
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
LV +FF +F+ WKWPNPV+L + VWDPR N DR HLMPIITP+YP
Sbjct: 273 AAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQ 332
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T +++ EF R + +EI G+ W LFE FF +++++ + + ++
Sbjct: 333 NSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWDRLFEAPSFFYRYRHFIVLLVNSQT 392
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL-----QC--------------------RLY 398
A D +W G VES++R LI +ER+ L +C L
Sbjct: 393 ADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQSANSSQNNSGNEDDLK 452
Query: 399 PGDFSENSVKSSSQCH-YFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWM---YSSWK 454
S++SV S+ C +F+GL ++ + D+ +++ F HV+ K
Sbjct: 453 QSQGSQSSVTSAPFCSMWFIGLEFERS----ENLNVDLTESIQNFTEHVMMHGVNIKMLK 508
Query: 455 QGMQIHVSHLRCQDIPDFVFPGGV-RPPKSLNEK---------KRKRIEVIESTKLKKSE 504
+GM I H++ + + ++ + R KS+ RKR+ ST+L +S+
Sbjct: 509 EGMTIDARHVKRKQLSLYLDADFLKRERKSMESHNNFNNTLLANRKRL----STELAQSQ 564
Query: 505 SSTAGHSSGQKSSQTESGVALDGSHGLKSGPSVEPSTSSVSSSTSASS 552
S SGQ+SS G+ G SG + + S++ S +S
Sbjct: 565 DSLP---SGQQSS---------GNRGRDSGAKIHRLSESLTEENSNAS 600
>gi|380815688|gb|AFE79718.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/494 (40%), Positives = 298/494 (60%), Gaps = 17/494 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKR 491
P + +KK+K+
Sbjct: 497 ---PAEILQKKKKQ 507
>gi|296223786|ref|XP_002757774.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Callithrix jacchus]
Length = 736
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/494 (40%), Positives = 297/494 (60%), Gaps = 17/494 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGS-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKR 491
P + +KK+K+
Sbjct: 497 ---PAEILQKKKKQ 507
>gi|120952595|ref|NP_991321.2| poly(A) polymerase alpha [Danio rerio]
Length = 723
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 236/630 (37%), Positives = 336/630 (53%), Gaps = 48/630 (7%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D++ T++L + L +F E E R+ VLG+L+ +VK WI+ V+ K I
Sbjct: 25 ISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIREVSEAKNI 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
I K+FTFGSYRLGV DIDALCV P + R DFF + L+E V
Sbjct: 85 P-ASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-TDFFSSFYEKLKEQEEV 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPE+LD D LL NLD + + SLNG
Sbjct: 143 KDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR DR HLMPIITP+YP
Sbjct: 263 VAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T IM EEF+R + +EI K W LFE +FF +K+Y+ + +A+
Sbjct: 323 NSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKYKHYIVLLASAQT 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + +PG E + K + +G+
Sbjct: 383 EKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPGP-KEGNDKEEFSTMWVIGIV 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHV---VWMYSSWKQGMQIHVSHLRCQDIPDFVFPGG 477
K+ + + D+ ++ F V ++Q M+I H++ + + +
Sbjct: 442 FKK-MEGSENLNVDLTFDIQSFTDTVYRQAITSKMFEQDMKITAMHVKRKQLHQLL---- 496
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSV 537
P +++ KRK HSS + +S + L L S S+
Sbjct: 497 --PEVAIHRSKRK-------------------HSSDGVRAMNDSNLDL----SLDSDNSM 531
Query: 538 EPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQ-VGATVAAALATGTISSF 596
SV S T S+ A S + AT+ S+ Q + G A GT SS
Sbjct: 532 -----SVPSPTGPSAAKIARAPSPQGSTGTATNTSELQGKTEATGENTHLASVDGTSSS- 585
Query: 597 CQNESLEELEPPELTAPCFKTAFVATQKPI 626
N S + PP+ T+P + Q P+
Sbjct: 586 --NASGKGAAPPQSTSPIQSEKKPSEQNPL 613
>gi|109102989|ref|XP_001115228.1| PREDICTED: poly(A) polymerase gamma-like [Macaca mulatta]
Length = 736
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/494 (40%), Positives = 297/494 (60%), Gaps = 17/494 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTNEILQGKSNWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKR 491
P + +KK+K+
Sbjct: 497 ---PAEILQKKKKQ 507
>gi|403260636|ref|XP_003922768.1| PREDICTED: poly(A) polymerase gamma [Saimiri boliviensis
boliviensis]
Length = 736
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/494 (40%), Positives = 297/494 (60%), Gaps = 17/494 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGS-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRKR 491
P + +KK+K+
Sbjct: 497 ---PAEILQKKKKQ 507
>gi|193573537|ref|XP_001946233.1| PREDICTED: poly(A) polymerase gamma-like [Acyrthosiphon pisum]
Length = 640
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/525 (39%), Positives = 310/525 (59%), Gaps = 23/525 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT +D+ TK L+ L EK+ ++E+ R+EVL L+ + K+WI+ V+M++ +
Sbjct: 8 ISDALPTDIDIQLTKSLDDALSREKVITTDEDLSQRLEVLSMLNNLAKEWIREVSMERNL 67
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E + + TFGSYRLGV DIDA+ + P + TR D+F + L+E P +
Sbjct: 68 P-EITAENVGGLVCTFGSYRLGVYHKGADIDAIVIVPRHITR-TDYFATFYNKLKENPSI 125
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
++ V +A VPVIK G+ +D+L+A+L + ED D QD LL NL+ + V SLNG
Sbjct: 126 NNVRAVEEAFVPVIKMIIQGIEIDMLFARLALKEVHEDTDLQQDDLLRNLNPKCVRSLNG 185
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN +F+ TL ++ WAKR +YSNA+G+LGG++WA+LVARVCQLYPNA
Sbjct: 186 CRVTDSILRLVPNRESFKKTLIAIKLWAKRHRVYSNALGYLGGVSWAMLVARVCQLYPNA 245
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
P L+ +FF IF+ W+WP PV+L P + + + VWDPR N DR H+MPIITP YP
Sbjct: 246 APATLIHKFFLIFSKWQWPQPVLLKPSYFMDLGYPVWDPRVNMADRNHVMPIITPVYPQQ 305
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +TL I+Q+EF+ + ++ EI G+ +W +F+P FF ++ +L I + A
Sbjct: 306 NSTFNVSHSTLAIIQDEFKTSLDIMGEILTGESSWSKIFQPSKFFTKYRYFLAITVFANC 365
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQ--CHYFMGLGR 421
+ +W+G VESRLR L +E ++ V + L P F KS + +F+GL
Sbjct: 366 DEELLEWRGLVESRLRFLPTSLE-EIECVQRSHLNPDQFVLPYDKSQGRPSSVWFVGL-- 422
Query: 422 KQGVSPQDGE--KFDMRLTVEEF------KSHVVWMYSSWKQGMQIHVSHLRCQDIPDFV 473
+S +G D + +F ++H + +K GM I V+HL+ +D+ D+V
Sbjct: 423 --EISKSNGTVVNLDFSTHIRDFCLLVKSRAHTI-----FKAGMDIQVNHLKRKDLRDYV 475
Query: 474 FPGGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQ 518
P ++ K++ +I ST+ + S S S +S+
Sbjct: 476 -PDELKKEKAIPNTVGSKIIARLSTEGRHSVSELVEESQKSPTSR 519
>gi|427788767|gb|JAA59835.1| Putative polya polymerase [Rhipicephalus pulchellus]
Length = 817
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 218/564 (38%), Positives = 319/564 (56%), Gaps = 19/564 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ P D+ T ELE+ L LF SEEE R+EVL +++ +VK WI V++ K +
Sbjct: 46 ISTAPPKPSDLQRTDELEETLRQFGLFESEEELAHRMEVLSKINQLVKKWIYEVSIKKNM 105
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K++TFGSYRLGV DID LCV P + R DFF +L++ V
Sbjct: 106 P-SSVAENVGGKIYTFGSYRLGVHTKGADIDTLCVAPRHIER-SDFFASFVELLRQQEEV 163
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPED D ++L NLD++ V SLNG
Sbjct: 164 KDLRAVEEAFVPVIKMTFDGIELDMLFARLALKDIPEDQDLRDVNILKNLDQKCVRSLNG 223
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR LR ++ WAKR G+YSN +G+LGG++WA+LVAR CQLYPNA
Sbjct: 224 CRVTDEILHLVPNRETFRLALRAIKLWAKRHGVYSNVLGYLGGVSWAMLVARTCQLYPNA 283
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
LV +FF +F+ W WP PV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 284 AAATLVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVNVADRFHLMPIITPAYPQQ 343
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +TL IM++EF++ + +EI + W+ LFEP +FFG +K+++ + + ++
Sbjct: 344 NSTFNVSVSTLTIMRQEFKQGLAITDEIMLRRSDWMKLFEPPNFFGKYKHFIVLMASTQS 403
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSS-QCHYFMGLGRK 422
+W G VES++R LI +ER + + P F + + Q +F+GL
Sbjct: 404 KEHHLEWYGLVESKIRILISNLER-HPYIAIAHVNPESFPPSEPEGDKLQSMWFIGLQFN 462
Query: 423 QGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPK 482
+ +D R V+ K + + +KQ M++ + ++R +++ ++ P
Sbjct: 463 KTEHVNIDLTYDTRSFVDTVKRQATAI-NIFKQDMEVDIKYVRRRELVRYL------PQS 515
Query: 483 SLNEKKRKRIEVIESTKLKKSESSTAGHSSGQK----SSQTES---GVALDGSHGLKSGP 535
LN K+K + +T ++S S K SS+++S G+ DG G
Sbjct: 516 VLNRCKKKGNKTTNTTPNSTPQNSPGMTSQAGKKALSSSRSDSALLGLVGDGMGGTVGND 575
Query: 536 SVEPSTSSVSS-STSASSRPQRPA 558
S S SS S +AS P A
Sbjct: 576 IALTSDDSCSSLSVTASGNPASAA 599
>gi|358059327|dbj|GAA94903.1| hypothetical protein E5Q_01558 [Mixia osmundae IAM 14324]
Length = 618
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/510 (39%), Positives = 292/510 (57%), Gaps = 39/510 (7%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
++T P + T+ L + LF ++ R VLGRLDG+VK++++R +G
Sbjct: 13 VTTDPPKPHSLRMTESLMAEMRARNLFETDAGERRRESVLGRLDGMVKEFVRRACQLRGR 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E I EA K+FTFGSYRLGV GP DID LCV P Y R D FF ML+E V
Sbjct: 73 SQSE-IDEAGGKIFTFGSYRLGVHGPGADIDTLCVVPVYVERAD-FFTIFLDMLRERDDV 130
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
D+T +P+A VP+IK KF V +DL +A++ +P+DL+ D+LL LDE+ V SLNG
Sbjct: 131 RDITDIPEAYVPLIKVKFTNVEIDLTFARINRPTVPDDLELGDDNLLKQLDERDVRSLNG 190
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD+IL LVPNI FR +LR +++WAKRR +Y+N +GF GG++WA+LVAR+CQLYPN
Sbjct: 191 SRVTDQILRLVPNIPVFRDSLRAIKYWAKRRAVYANVVGFPGGVSWAMLVARICQLYPNE 250
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
P ++SRFF IF W+WP PV+L P++ + VW+P N DR H MP+ITP+YP
Sbjct: 251 CPGGILSRFFHIFLLWQWPEPVLLTPLKQGPLNVRVWNPHVNSADRMHKMPVITPAYPSM 310
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
S++N+S +++ +++ E++R + + I G+ TW LFEP FF ++ YLQI ++++
Sbjct: 311 CSTHNISHSSMAVIKAEWERGENIVNRIAVGQTTWAELFEPTDFFYKYRYYLQITASSQD 370
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSEN------------------ 405
+ +W G VES+LR L +E GV +Y +F +
Sbjct: 371 MDNQLKWSGTVESKLRTLGANLE-GAEGVTLAHIYVDEFEKTYSCKTEEEVKLVASGAST 429
Query: 406 ------------SVKSSSQCH---YFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMY 450
V+ + + H +++GL G +K D+ EF + +V +
Sbjct: 430 PEISARTEDDIKDVEGAVKLHTSNFYIGLSIDLGPKGSGSKKLDLSYPTCEF-TKLVKRW 488
Query: 451 SSWKQGMQIHVSHLRCQDIPDFVFPGGVRP 480
+ M I V +++ +PDFVF G RP
Sbjct: 489 EKYTPEMGITVRYMKNIALPDFVF--GDRP 516
>gi|340376009|ref|XP_003386526.1| PREDICTED: poly(A) polymerase gamma-like [Amphimedon queenslandica]
Length = 689
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/558 (39%), Positives = 314/558 (56%), Gaps = 32/558 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ P D+ T LE L +F + E R+ VLG+L+ +VK WI ++ +KG
Sbjct: 16 ISTAVPKPQDIKLTNLLEACLQKYGVFDTPEGQKHRLLVLGKLNELVKKWIIDISKEKGK 75
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S+ E +E +FTFGSYRLGV G DID L V P + R DFF +L E V
Sbjct: 76 SEAEA-KEVGGTIFTFGSYRLGVHGKGADIDTLLVAPRHIER-TDFFSSFKELLFEAKNV 133
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
++ VPDA VPVIK +F+GV +DLL+A+L VIP+ L L SLL NLD + V SLNG
Sbjct: 134 TNVRAVPDAFVPVIKLEFDGVEMDLLFARLALPVIPDGLGLLDMSLLKNLDAKCVRSLNG 193
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR LR ++ WAKRRGIYSNA+G+LGG++WA+LVAR CQLYPNA
Sbjct: 194 CRVTDSILKLVPNQETFRLALRAIKLWAKRRGIYSNALGYLGGVSWAMLVARTCQLYPNA 253
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHH--VWDPRSNQRDRKHLMPIITPSYP 301
+ +V +FF +F W WP PV+L + + + VW+P+ N D HLMPIITP+YP
Sbjct: 254 ASSTIVLKFFFVFEKWNWPQPVLLRKAEEDVLGLNLQVWNPQVNPGDAHHLMPIITPAYP 313
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
NS++NV+ +T +M EF+R ++C +I+ GK +W LFEP FF +K+Y+ I A
Sbjct: 314 QQNSTFNVTKSTRDVMLNEFRRGLDICRDIDVGKLSWDILFEPIKFFSLYKHYIVICATA 373
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
++ +W G VES++R LI +E D + + P + V S+ H +G
Sbjct: 374 IDSDLLLKWSGLVESKIRILIGKLE-DNENIKIAHVNPTSYPR-IVPDSTDSHLMWFIGL 431
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVV---WMYSS--WKQGMQIHVSHLRCQDIPDFVFPG 476
+ V P G + ++ F + VV + SS + G Q+ V H R +D+ D++ P
Sbjct: 432 EFCVGP-GGVNITLTYEIQMFINSVVKSPALQSSPDLRNGTQLDVKHARRRDLSDYLSPD 490
Query: 477 GVRP-PKSLNE------------KKRKRIEVIESTKLKKS-------ESSTAGHSSGQKS 516
V P PK + K+ +IE +E ++ K +S T G ++
Sbjct: 491 IVPPLPKKKKQFPIDIETPSPILKRVHKIERVEEPRVSKRIKIMDDPDSLTDSSIGGGEA 550
Query: 517 SQTESGVALDGSHGLKSG 534
+ + V D S + +G
Sbjct: 551 TAKTTNVDEDESSLMSTG 568
>gi|427797219|gb|JAA64061.1| Putative polya polymerase, partial [Rhipicephalus pulchellus]
Length = 759
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/564 (38%), Positives = 319/564 (56%), Gaps = 19/564 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ P D+ T ELE+ L LF SEEE R+EVL +++ +VK WI V++ K +
Sbjct: 97 ISTAPPKPSDLQRTDELEETLRQFGLFESEEELAHRMEVLSKINQLVKKWIYEVSIKKNM 156
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K++TFGSYRLGV DID LCV P + R DFF +L++ V
Sbjct: 157 P-SSVAENVGGKIYTFGSYRLGVHTKGADIDTLCVAPRHIER-SDFFASFVELLRQQEEV 214
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPED D ++L NLD++ V SLNG
Sbjct: 215 KDLRAVEEAFVPVIKMTFDGIELDMLFARLALKDIPEDQDLRDVNILKNLDQKCVRSLNG 274
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR LR ++ WAKR G+YSN +G+LGG++WA+LVAR CQLYPNA
Sbjct: 275 CRVTDEILHLVPNRETFRLALRAIKLWAKRHGVYSNVLGYLGGVSWAMLVARTCQLYPNA 334
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
LV +FF +F+ W WP PV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 335 AAATLVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVNVADRFHLMPIITPAYPQQ 394
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +TL IM++EF++ + +EI + W+ LFEP +FFG +K+++ + + ++
Sbjct: 395 NSTFNVSVSTLTIMRQEFKQGLAITDEIMLRRSDWMKLFEPPNFFGKYKHFIVLMASTQS 454
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSS-QCHYFMGLGRK 422
+W G VES++R LI +ER + + P F + + Q +F+GL
Sbjct: 455 KEHHLEWYGLVESKIRILISNLERH-PYIAIAHVNPESFPPSEPEGDKLQSMWFIGLQFN 513
Query: 423 QGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPK 482
+ +D R V+ K + + +KQ M++ + ++R +++ ++ P
Sbjct: 514 KTEHVNIDLTYDTRSFVDTVKRQATAI-NIFKQDMEVDIKYVRRRELVRYL------PQS 566
Query: 483 SLNEKKRKRIEVIESTKLKKSESSTAGHSSGQK----SSQTES---GVALDGSHGLKSGP 535
LN K+K + +T ++S S K SS+++S G+ DG G
Sbjct: 567 VLNRCKKKGNKTTNTTPNSTPQNSPGMTSQAGKKALSSSRSDSALLGLVGDGMGGTVGND 626
Query: 536 SVEPSTSSVSS-STSASSRPQRPA 558
S S SS S +AS P A
Sbjct: 627 IALTSDDSCSSLSVTASGNPASAA 650
>gi|321469973|gb|EFX80951.1| hypothetical protein DAPPUDRAFT_318160 [Daphnia pulex]
Length = 630
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/474 (40%), Positives = 286/474 (60%), Gaps = 11/474 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P LD+ T EL + LV + ++EE R+EVL +++ + K+WIK V++ K +
Sbjct: 31 ISMAMPKPLDLQKTIELSEALVPHGVSETDEELNHRMEVLRKVNELAKEWIKEVSVQKNM 90
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
K++TFGSYRLGV DIDALCV P + R D +F +L++ P V
Sbjct: 91 P-TSAADHVGGKIYTFGSYRLGVHNKGADIDALCVAPRHVDRVD-YFTSFVDLLKKQPEV 148
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V +A VPVIK F+G+ +D+L+A+L IP+++D D LL NLD + V SLNG
Sbjct: 149 TELRAVEEAFVPVIKMNFDGIELDMLFARLALKEIPDNMDLKDDMLLKNLDPKCVRSLNG 208
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR LR ++ WAK+ GIYSN +G+LGG++WA+LVAR CQLYPNA
Sbjct: 209 CRVTDEILRLVPNIDNFRLALRAIKLWAKKHGIYSNVLGYLGGVSWAMLVARTCQLYPNA 268
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
LV +FF +F+ W+WP PV+L P + + VWDPR N DR HLMPIITP+YP
Sbjct: 269 AAATLVQKFFLVFSKWEWPQPVLLKPPDNVNLNYPVWDPRVNVSDRYHLMPIITPAYPQQ 328
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T +MQEEF++ + EEI GK +W LFEP +FF +K+++ + ++ +
Sbjct: 329 NSTFNVSCSTRAVMQEEFRQGFNMTEEIMTGKASWDKLFEPPNFFVKYKHFIVLIASSSS 388
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSS-QCHYFMGLGRK 422
D +W G VES++R LI +ER+ + + P + + + +F+GL K
Sbjct: 389 VEDQLEWVGLVESKIRHLILALERN-DHITLAHINPEQYDPVQPEPDTISTMWFIGLVFK 447
Query: 423 QGVSPQDGEKFDMRLTVEEFKSHVVWMYSSW---KQGMQIHVSHLRCQDIPDFV 473
+ + D+ ++ F V S+ K G +I H++ + + ++
Sbjct: 448 K----TESLNIDLTQDIQAFTGQVHRQASTAKTVKDGRRIDAKHVKRKQLSSYL 497
>gi|55727879|emb|CAH90692.1| hypothetical protein [Pongo abelii]
gi|83405193|gb|AAI10907.1| PAPOLG protein [Homo sapiens]
Length = 506
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/493 (40%), Positives = 298/493 (60%), Gaps = 17/493 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS ++P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 496
Query: 478 VRPPKSLNEKKRK 490
P + +KK+K
Sbjct: 497 ---PAEILQKKKK 506
>gi|119620434|gb|EAX00029.1| poly(A) polymerase gamma, isoform CRA_a [Homo sapiens]
Length = 508
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/487 (41%), Positives = 296/487 (60%), Gaps = 11/487 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS ++P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++ P
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-PAE 499
Query: 478 VRPPKSL 484
+R SL
Sbjct: 500 IRIVLSL 506
>gi|449496519|ref|XP_002196793.2| PREDICTED: poly(A) polymerase gamma [Taeniopygia guttata]
Length = 746
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/500 (41%), Positives = 302/500 (60%), Gaps = 20/500 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P+ D I T++L + + +F +EE R VLG+L+ V++WI + K +
Sbjct: 25 ISLAPPSDKDHIHTQKLIEAMKPFGVFEDQEELYHRTTVLGKLNNFVREWILELAESKNL 84
Query: 64 --SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
S EQ+ K+FTFGSYRLGV +DIDALCV P + R DFF F L+
Sbjct: 85 PPSITEQV---GGKIFTFGSYRLGVHTKGSDIDALCVAPSHVER-SDFFQSFFEKLKNQE 140
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V++L + DA VPVIKF+F+G+ +DL++A+L + +DLD DS L +LD + + SL
Sbjct: 141 EVKNLRAIEDAYVPVIKFEFDGIEIDLVFAKLSLPTVSDDLDLRDDSCLKSLDIRCIRSL 200
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RVTD IL LVPN+ NFR TLR ++ WAKRRG+YSN MGFLGG++WA+LVAR+CQLYP
Sbjct: 201 NGSRVTDEILRLVPNLENFRLTLRAVKLWAKRRGVYSNIMGFLGGVSWAMLVARICQLYP 260
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NAL + L+++FF IF+ W WP PV+L ++ + VWDPR N DR H+MPIITP+YP
Sbjct: 261 NALASTLINKFFLIFSKWDWPKPVLLKRLEESFLNLPVWDPRVNPSDRYHVMPIITPAYP 320
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
NS+YNVS +T +M EEFQR E+ +EI GK W LFEP +FF +K+Y+ + +A
Sbjct: 321 QQNSTYNVSVSTRAVMVEEFQRGLEVTDEILKGKSDWSKLFEPLNFFQKYKHYIVLTASA 380
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCH---YFMG 418
W G V+S++R L+ +ER+ + + P F N V + +F+G
Sbjct: 381 FTEEHHLNWIGLVKSKIRVLVGNLERNE-FITIAHVQPQSFPGNEVLYKQNAYVSMWFLG 439
Query: 419 LGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
L K+ S D+ ++ F V S+ K+GM+I ++++ + + F+
Sbjct: 440 LVFKKAESAVK-TNVDLTHGIQSFTDTVYRQASALNILKEGMKIEATYVKRKQLHYFL-- 496
Query: 476 GGVRPPKSLNEKKRKRIEVI 495
P +L ++K++R+ I
Sbjct: 497 ----PAGTLQKRKKQRVSDI 512
>gi|195057028|ref|XP_001995187.1| GH22767 [Drosophila grimshawi]
gi|193899393|gb|EDV98259.1| GH22767 [Drosophila grimshawi]
Length = 857
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/605 (35%), Positives = 322/605 (53%), Gaps = 63/605 (10%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T EL K L +F S++E R+E+L +L+ +VK WIK +++ K +
Sbjct: 32 ISLAEPRAEDLQRTGELGKSLEPYNVFESQDELNHRMEILAKLNTLVKQWIKEISVSKNM 91
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E K++TFGSYRLGV DIDALCV P R D+F F +L++ P V
Sbjct: 92 P-EAAADRLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIER-TDYFQSFFEVLKKQPEV 149
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ V +A VPVIK F+G+ +DLL+A+L IP+D D D+LL NLD ++V SLNG
Sbjct: 150 TECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLKNLDPRSVRSLNG 209
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL+LVPNI NFR LR ++ WAK+ GIYSN++G+ GG+ WA+LVAR CQLYPNA
Sbjct: 210 CRVTDEILALVPNIENFRLALRAIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNA 269
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
LV +FF +F+ WKWPNPV+L + VWDPR N DR HLMPIITP+YP
Sbjct: 270 AAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQ 329
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T +++ EF R + +EI G+ W LFE FF +++++ + + ++
Sbjct: 330 NSTFNVSESTKKVILTEFNRGMSITDEIMLGRVNWDRLFEAPSFFYRYRHFIVLLVNSQT 389
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL-----QC-RLYPGDFSENSVKSSSQCH--- 414
A D +W G VES++R LI +ER+ L +C L G + N+ +++S
Sbjct: 390 ADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFELKKGAVTANNSQNNSGNEDDL 449
Query: 415 ---------------------------YFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVV 447
+F+GL ++ + D+ +++ F HV+
Sbjct: 450 KQQQQQQQQQKDEKPATSTVAAPFCSLWFIGLEFERS----ENLNIDLTESIQNFTEHVI 505
Query: 448 WM---YSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKS------------LNEKKRKRI 492
K+GM I H++ + + ++ ++ + L +KR
Sbjct: 506 MHGVNIKMLKEGMAIDARHVKRKQLSVYLDADFLKRERKSMESHNNFNTTMLANRKRLST 565
Query: 493 EVIEST------KLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSVEPSTSSVSS 546
E+ +S + + + SS G SG K + + D S+ V P+T + S
Sbjct: 566 ELAQSQDPLPPGQQQSAASSNRGRESGAKVHRLSESLNEDNSNASSDMGGVMPTTPTASQ 625
Query: 547 STSAS 551
+ S
Sbjct: 626 MNAPS 630
>gi|332226879|ref|XP_003262619.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma [Nomascus
leucogenys]
Length = 735
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/535 (38%), Positives = 313/535 (58%), Gaps = 19/535 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS ++P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFPWDN 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMY------SSWKQGMQIHVSHLRCQDIPDFVF 474
+ ++ E ++ +S +Y + K+GM+I +H++ + + ++
Sbjct: 442 FSESRKXENAESVNIXXXQSYIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL- 500
Query: 475 PGGVRPPKSLNEKKRKRI-EVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGS 528
P + L +KK++ + +V S+ +S+ S+ S S T++G L+ S
Sbjct: 501 -----PAEILQKKKKQSLSDVNRSSGGLQSKRSSLDSSCXNSSRDTDNGNPLNFS 550
>gi|10433147|dbj|BAB13919.1| unnamed protein product [Homo sapiens]
Length = 501
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/476 (41%), Positives = 291/476 (61%), Gaps = 10/476 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS ++P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFV 473
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|213625101|gb|AAI69821.1| LOC733387 protein [Xenopus laevis]
Length = 750
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 221/598 (36%), Positives = 327/598 (54%), Gaps = 29/598 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + + +F + E R+ VLG+L+ +VK+WI + K +
Sbjct: 23 ISLAGPKDIDHIYTQKLTEAMRPFGVFEDDAELSHRMVVLGKLNNLVKEWIAELGEQKSL 82
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
I A K+FTFGSYRLGV DID+LCV P + R DFF L++ +
Sbjct: 83 P-PTIISAAGGKIFTFGSYRLGVHTKGADIDSLCVAPRHVER-SDFFQTFSEKLKQQDGI 140
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
++L V DA VPVIKF+F +DL++A+L IP++LD DS L NLD + + SLNG
Sbjct: 141 KNLRAVEDAFVPVIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDSRLRNLDIRCIRSLNG 200
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN NFR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 201 CRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 260
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 261 IASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPIITPAYPQQ 320
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI G+ W LFEP +FF +K+Y+ + +A
Sbjct: 321 NSTYNVSISTRSVMVEEFKQGLLVTDEILLGRCDWSKLFEPPNFFHKYKHYIVLTASAST 380
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCH---YFMGLG 420
+W G VES++R L+ +ER+ + + P F N + +F+G+
Sbjct: 381 EEHHLEWVGLVESKIRVLVGNLERN-NFITLAHVNPQSFPGNRDHCKDNEYVSMWFLGII 439
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
K+ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 440 FKK-VENAESVNIDLTHDIQSFTDTVYRQANNINMLKKGMKIEATHVKRKQLHHYL---- 494
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSV 537
P + + ++K++ + I + T + G LD S +G
Sbjct: 495 --PAEVVQKRKKQSVPDINRSACALLSKRT-----------SLDGNFLDSSRDTDTGTPC 541
Query: 538 EPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISS 595
+ TS SS S S P P + +++ SQ V A A L+ I S
Sbjct: 542 DSPTSCHKSSRSDS--PSLPDAHRSLTEGTSSTCSQTMADVHVHAEPAQGLSIPVIGS 597
>gi|17536297|ref|NP_496067.1| Protein T15H9.6 [Caenorhabditis elegans]
gi|3879808|emb|CAA87419.1| Protein T15H9.6 [Caenorhabditis elegans]
Length = 554
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/477 (40%), Positives = 293/477 (61%), Gaps = 24/477 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ P DV T L+ L + K F S++E+L R++VL LDG+VKDW+++ T+ +
Sbjct: 20 ISTAFPKANDVALTSSLQSSLEEFKSFESKQETLLRIKVLKNLDGLVKDWVQKTTISRIP 79
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
D Q+ A KL FGSYRLGV DID++ V P + TR DFF +L + P V
Sbjct: 80 KD--QMFNAGGKLIPFGSYRLGVHSSGADIDSIVVAPRHITR-SDFFNSFKDILAKNPEV 136
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V A VP++ K++GV +D+L+A+L +PEDL+ L DSLL NLDE++V SLNG
Sbjct: 137 TELCAVEKAFVPIMTLKYSGVDIDILFARLALKSVPEDLNILDDSLLKNLDEESVRSLNG 196
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV +++L LVP+ +NF TLR ++ WAK GIYSN+MGF GGI WA+LVAR+CQLYPNA
Sbjct: 197 CRVAEQLLKLVPHQKNFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVARICQLYPNA 256
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQ-----YQAMPHHVWDPRSNQRDRKHLMPIITP 298
P+ L+ + F IF+ W WP PV+L I + VWDPR N DR HLMPIITP
Sbjct: 257 APSRLIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHADRYHLMPIITP 316
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIH 358
++P NS++NVS ++++++Q+E ++A +C++I G W L E +FF + +++ +
Sbjct: 317 AFPQQNSTHNVSRSSMKVIQDEMKKALIICDKIHEGTLEWRDLLEEINFFSKYHHFIALK 376
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQ-CRLYPGDFSENSVKSSSQCHYFM 417
+ A++ + + G+ ESR+RQL+ ++E++ V+Q ++ P F + VK + +F+
Sbjct: 377 LKAESVKEELAFGGFFESRIRQLVQILEKNQ--VIQVAQINPRKFKD--VKDPKKSIWFI 432
Query: 418 GLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVF 474
GL V + D+ +++FK ++ +Q M + CQ DF +
Sbjct: 433 GLEFVANV-----KNVDLTSDIQQFKMNID------RQSMSVKEIAAGCQVETDFTY 478
>gi|116283528|gb|AAH16738.1| PAPOLG protein [Homo sapiens]
Length = 496
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/467 (41%), Positives = 286/467 (61%), Gaps = 10/467 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS ++P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILYLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHL 464
++ V + D+ ++ F V ++ K+GM+I +H+
Sbjct: 442 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHV 487
>gi|224141615|ref|XP_002324162.1| predicted protein [Populus trichocarpa]
gi|222865596|gb|EEF02727.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/280 (61%), Positives = 214/280 (76%), Gaps = 1/280 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT D+ ELEK LVD L S++E++ R EVLGR+D IVKDW+K++T +G
Sbjct: 9 ISVAGPTEPDLHRNAELEKFLVDSGLNESKDETIKREEVLGRIDQIVKDWVKQLTRQRGY 68
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+D+ ++EANA +FTFGSYRLGV GP DID LCVGP Y R +DFF L L ET V
Sbjct: 69 TDQ-MVEEANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFITLHDKLAETEEV 127
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVPDA VPV+KFKF G+S+DLLYA + V+PEDLD S+L+ +DEQTV SLNG
Sbjct: 128 TELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISNGSVLYEVDEQTVRSLNG 187
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D+IL LVPN+ +FR+TLRCL+FWAKRRG+YSN GFLGG+NWALLVARVCQLYPNA
Sbjct: 188 CRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 247
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPR 283
+P++LVSRFF+++ W+WPNPVMLC I+ + VWDPR
Sbjct: 248 IPSMLVSRFFRVYTQWRWPNPVMLCSIEEDDLGFPVWDPR 287
>gi|147905450|ref|NP_001089116.1| poly(A) polymerase gamma [Xenopus laevis]
gi|73671771|gb|AAZ80291.1| SRP 3'-adenylating protein [Xenopus laevis]
Length = 751
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 221/598 (36%), Positives = 327/598 (54%), Gaps = 29/598 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + + +F + E R+ VLG+L+ +VK+WI + K +
Sbjct: 24 ISLAGPKDIDHIYTQKLTEAMGPFGVFEDDAELSHRMVVLGKLNNLVKEWIAELGEQKSL 83
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
I A K+FTFGSYRLGV DID+LCV P + R DFF L++ +
Sbjct: 84 P-PTIISAAGGKIFTFGSYRLGVHTKGADIDSLCVAPRHVER-SDFFQTFSEKLKQQDGI 141
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
++L V DA VPVIKF+F +DL++A+L IP++LD DS L NLD + + SLNG
Sbjct: 142 KNLRAVEDAFVPVIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDSRLRNLDIRCIRSLNG 201
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN NFR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 202 CRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 261
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 262 IASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPIITPAYPQQ 321
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI G+ W LFEP +FF +K+Y+ + +A
Sbjct: 322 NSTYNVSISTRSVMVEEFKQGLLVTDEILLGRCDWSKLFEPPNFFHKYKHYIVLTASAST 381
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCH---YFMGLG 420
+W G VES++R L+ +ER+ + + P F N + +F+G+
Sbjct: 382 EEHHLEWVGLVESKIRVLVGNLERN-NFITLAHVNPQSFPGNRDHCKDNEYVSMWFLGII 440
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
K+ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 441 FKK-VENAESVNIDLTHDIQSFTDTVYRQANNINMLKKGMKIEATHVKRKQLHHYL---- 495
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSV 537
P + + ++K++ + I + T + G LD S +G
Sbjct: 496 --PAEVVQKRKKQSVPDINRSACALLSKRT-----------SLDGNFLDSSRDTDTGTPC 542
Query: 538 EPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISS 595
+ TS SS S S P P + +++ SQ V A A L+ I S
Sbjct: 543 DSPTSCHKSSRSDS--PSFPDAHRSLTEGTSSTCSQTMADVHVHAEPAQGLSIPVIGS 598
>gi|388857257|emb|CCF49099.1| probable PAP1-poly(A) polymerase [Ustilago hordei]
Length = 672
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 217/610 (35%), Positives = 317/610 (51%), Gaps = 79/610 (12%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
I+ + PT ++ TK L L + +F S+EES R +LG+LD +VKD++ RV++ G+
Sbjct: 26 IAANGPTPREIEVTKTLVAELEKQGVFESDEESKVREVILGKLDAMVKDFVYRVSIANGM 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E + A K+FTFGSYRLGV GP +DID LCV P + R +DFF ML+E V
Sbjct: 86 S-ESLARSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVQR-EDFFSVFETMLKEREEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
++ VP A VP+I KF GV +D +A+L S + + L D+LL NLDE+ V SL G
Sbjct: 144 TEVAGVPTAHVPLIASKFMGVDIDFTFARLSLSRVEDSLSLEDDNLLRNLDERDVRSLGG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVPNI FR LRC++ WA++R IYSN MGFLGG+ WA+L AR+CQLYPN
Sbjct: 204 SRVTDGILRLVPNIHVFRMALRCIKLWAQQRAIYSNVMGFLGGVAWAMLTARICQLYPNE 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+VSRFF IF WKWP PV+L PI+ + VW+P+ DR H MPIITP+YP
Sbjct: 264 AAGAIVSRFFIIFYQWKWPQPVLLTPIEDGPLSVRVWNPKLYPSDRLHRMPIITPAYPGM 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++NVS +T +M EF+RA E+ + + GK W LF + FF +K YLQ+ IA+
Sbjct: 324 CATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTDWCELFAKHDFFFKYKYYLQV-IASSG 382
Query: 364 AGDFR-QWKGWVESRLRQLIHMIE------------RDMGGVLQCR-------LYPGDFS 403
+ D + +W G VES++RQL+ +E + V +C + GD
Sbjct: 383 SADLQLKWHGTVESKIRQLVMKLELVPTITCAHPFIKGFDQVSECHNDHEVRLVATGDIP 442
Query: 404 ENSVKSSSQCH---------------------------------YFMGLGRKQGVSPQDG 430
E + + + +++GL + ++ +
Sbjct: 443 EQVAQRTQKVAALPETEEAKKAAEEEAAKITEGKEGHRMIYTTTFYIGLSIEPKLAGEGP 502
Query: 431 EKFDMRLTVEEFKSHVVWMYSSWKQ----GMQIHVSHLRCQDIPDFVFPGGVRPPKSLNE 486
K D+ EF V W+Q M I V H++ +P +VF GG
Sbjct: 503 RKLDISYPTAEFTGKV----KQWEQYDEASMGIVVRHIKWTQLPGYVFEGG--------- 549
Query: 487 KKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSVEPSTSSVSS 546
R+ + K+ + + +G + +G L S+G VE + ++V +
Sbjct: 550 --ENRVTAAAAGKVNGKRTKSGKKRNGDSAGNVANG-GLVESNG---AAQVEHTVTAVDN 603
Query: 547 STSASSRPQR 556
+ + P +
Sbjct: 604 GDAEMASPTK 613
>gi|195584945|ref|XP_002082256.1| GD25311 [Drosophila simulans]
gi|194194265|gb|EDX07841.1| GD25311 [Drosophila simulans]
Length = 815
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 177/385 (45%), Positives = 249/385 (64%), Gaps = 2/385 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T EL L +F S++E R+E+L +L+ +VK W+K +++ K +
Sbjct: 34 ISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLVKQWVKEISVSKNM 93
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ K++TFGSYRLGV DIDALCV P R D+F F +L++ P V
Sbjct: 94 P-ESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIER-TDYFQSFFEVLKKQPEV 151
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ V +A VPVIK F+G+ +DLL+A+L IP+D D D+LL NLD ++V SLNG
Sbjct: 152 TECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNG 211
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL+LVPNI NFR LR ++ WAK+ GIYSN++G+ GG+ WA+LVAR CQLYPNA
Sbjct: 212 CRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNA 271
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
LV +FF +F+ WKWPNPV+L + VWDPR N DR HLMPIITP+YP
Sbjct: 272 AAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQ 331
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T +++ EF R + +EI G+ W LFE FF +++++ + + ++
Sbjct: 332 NSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQT 391
Query: 364 AGDFRQWKGWVESRLRQLIHMIERD 388
A D +W G VES++R LI +ER+
Sbjct: 392 ADDHLEWCGLVESKVRLLIGNLERN 416
>gi|195335951|ref|XP_002034618.1| GM19819 [Drosophila sechellia]
gi|194126588|gb|EDW48631.1| GM19819 [Drosophila sechellia]
Length = 814
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 177/385 (45%), Positives = 249/385 (64%), Gaps = 2/385 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T EL L +F S++E R+E+L +L+ +VK W+K +++ K +
Sbjct: 34 ISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLVKQWVKEISVSKNM 93
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ K++TFGSYRLGV DIDALCV P R D+F F +L++ P V
Sbjct: 94 P-ESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIER-TDYFQSFFEVLKKQPEV 151
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ V +A VPVIK F+G+ +DLL+A+L IP+D D D+LL NLD ++V SLNG
Sbjct: 152 TECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNG 211
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL+LVPNI NFR LR ++ WAK+ GIYSN++G+ GG+ WA+LVAR CQLYPNA
Sbjct: 212 CRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNA 271
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
LV +FF +F+ WKWPNPV+L + VWDPR N DR HLMPIITP+YP
Sbjct: 272 AAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQ 331
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T +++ EF R + +EI G+ W LFE FF +++++ + + ++
Sbjct: 332 NSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQT 391
Query: 364 AGDFRQWKGWVESRLRQLIHMIERD 388
A D +W G VES++R LI +ER+
Sbjct: 392 ADDHLEWCGLVESKVRLLIGNLERN 416
>gi|442624286|ref|NP_001261097.1| hiiragi, isoform D [Drosophila melanogaster]
gi|440214537|gb|AGB93629.1| hiiragi, isoform D [Drosophila melanogaster]
Length = 827
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 177/385 (45%), Positives = 249/385 (64%), Gaps = 2/385 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T EL L +F S++E R+E+L +L+ +VK W+K +++ K +
Sbjct: 34 ISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLVKQWVKEISVSKNM 93
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ K++TFGSYRLGV DIDALCV P R D+F F +L++ P V
Sbjct: 94 P-ESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIER-TDYFQSFFEVLKKQPEV 151
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ V +A VPVIK F+G+ +DLL+A+L IP+D D D+LL NLD ++V SLNG
Sbjct: 152 TECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNG 211
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL+LVPNI NFR LR ++ WAK+ GIYSN++G+ GG+ WA+LVAR CQLYPNA
Sbjct: 212 CRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNA 271
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
LV +FF +F+ WKWPNPV+L + VWDPR N DR HLMPIITP+YP
Sbjct: 272 AAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQ 331
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T +++ EF R + +EI G+ W LFE FF +++++ + + ++
Sbjct: 332 NSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQT 391
Query: 364 AGDFRQWKGWVESRLRQLIHMIERD 388
A D +W G VES++R LI +ER+
Sbjct: 392 ADDHLEWCGLVESKVRLLIGNLERN 416
>gi|194881425|ref|XP_001974840.1| GG20896 [Drosophila erecta]
gi|190658027|gb|EDV55240.1| GG20896 [Drosophila erecta]
Length = 818
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 177/385 (45%), Positives = 250/385 (64%), Gaps = 2/385 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T EL L +F S++E R+E+L +L+ +VK W+K +++ K +
Sbjct: 36 ISLAEPRPEDLQRTDELRGSLEPFNVFESQDELNHRMEILAKLNTLVKQWVKEISVSKNM 95
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ K++TFGSYRLGV DIDALCV P R D+F F +L++ P V
Sbjct: 96 P-ESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIER-TDYFQSFFEVLKKQPEV 153
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ V +A VPVIK F+G+ +DLL+A+L IP+D D D+LL NLD ++V SLNG
Sbjct: 154 TECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNG 213
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL+LVPNI NFR LR ++ WAK+ GIYSN++G+ GG+ WA+LVAR CQLYPNA
Sbjct: 214 CRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNA 273
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
LV +FF +F+ WKWPNPV+L + VWDPR N DR HLMPIITP+YP
Sbjct: 274 AAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQ 333
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T +++ EF R + +EI G+ +W LFE FF +++++ + + ++
Sbjct: 334 NSTFNVSESTKKVILTEFNRGMNITDEIMLGRISWERLFEAPSFFYRYRHFIVLLVNSQT 393
Query: 364 AGDFRQWKGWVESRLRQLIHMIERD 388
A D +W G VES++R LI +ER+
Sbjct: 394 ADDHLEWCGLVESKVRLLIGNLERN 418
>gi|195431638|ref|XP_002063835.1| GK15696 [Drosophila willistoni]
gi|194159920|gb|EDW74821.1| GK15696 [Drosophila willistoni]
Length = 872
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 221/597 (37%), Positives = 324/597 (54%), Gaps = 64/597 (10%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T EL L +F S++E R+E+L +L+ +VK W+K +++ K +
Sbjct: 46 ISLAEPRPEDLQRTGELRGSLEPYNVFESQDELNHRMEILAKLNTLVKQWVKEISVSKNM 105
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ K++TFGSYRLGV DIDALCV P R D+F F +L++ P V
Sbjct: 106 P-EAAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIER-TDYFQSFFEVLKKQPEV 163
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ V +A VPVIK F+G+ +DLL+A+L IP+D D D+LL NLD ++V SLNG
Sbjct: 164 TECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLKNLDPRSVRSLNG 223
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL+LVPNI NFR LR ++ WAK+ GIYSN++G+ GG+ WA+LVAR CQLYPNA
Sbjct: 224 CRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNA 283
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
LV +FF +F+ WKWPNPV+L + VWDPR N DR HLMPIITP+YP
Sbjct: 284 AAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFPVWDPRVNASDRYHLMPIITPAYPQQ 343
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T +++ EF R + +EI G+ W LFE FF +++++ + + ++
Sbjct: 344 NSTFNVSESTKKVILTEFNRGMNITDEIMLGRVPWERLFEAPSFFYRYRHFIVLLVNSQT 403
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL-----QCRLYPGDFSENS------------ 406
A D +W G VES++R LI +ER+ L +C + S NS
Sbjct: 404 ADDHLEWCGLVESKVRLLIGNLERNAHIALAHVNPKCFEFKKGQSANSSQNNSGNEDDPK 463
Query: 407 -----------------VKSSSQCH-YFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVW 448
V SS C +F+GL ++ D D+ +++ F HV+
Sbjct: 464 QTQQQQTNNQANAAASTVTSSPFCSMWFIGLEFERS----DNLNIDLTESIQNFTEHVIM 519
Query: 449 M---YSSWKQGMQIHVSHLRCQDIPDFVFPGGV-RPPKSLNEK---------KRKRIEVI 495
K+GM I H++ + + ++ + R KS+ RKR+
Sbjct: 520 HGVNIKMLKEGMTIDARHVKRKQLSLYLDADFLKRERKSMENHNNFNNTLLANRKRL--- 576
Query: 496 ESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSVEPSTSSVSSSTSASS 552
ST+L +S+ G Q+ S S + G +SG V + S++ TS +S
Sbjct: 577 -STELSQSQDPLPGQQQQQQQSSAGS------NRGRESGAKVHRLSESLNEETSNTS 626
>gi|21064419|gb|AAM29439.1| RE25878p [Drosophila melanogaster]
Length = 659
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 177/385 (45%), Positives = 249/385 (64%), Gaps = 2/385 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T EL L +F S++E R+E+L +L+ +VK W+K +++ K +
Sbjct: 34 ISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLVKQWVKEISVSKNM 93
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ K++TFGSYRLGV DIDALCV P R D+F F +L++ P V
Sbjct: 94 P-ESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIER-TDYFQSFFEVLKKQPEV 151
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ V +A VPVIK F+G+ +DLL+A+L IP+D D D+LL NLD ++V SLNG
Sbjct: 152 TECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNG 211
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL+LVPNI NFR LR ++ WAK+ GIYSN++G+ GG+ WA+LVAR CQLYPNA
Sbjct: 212 CRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNA 271
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
LV +FF +F+ WKWPNPV+L + VWDPR N DR HLMPIITP+YP
Sbjct: 272 AAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQ 331
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T +++ EF R + +EI G+ W LFE FF +++++ + + ++
Sbjct: 332 NSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQT 391
Query: 364 AGDFRQWKGWVESRLRQLIHMIERD 388
A D +W G VES++R LI +ER+
Sbjct: 392 ADDHLEWCGLVESKVRLLISNLERN 416
>gi|195487053|ref|XP_002091755.1| GE13836 [Drosophila yakuba]
gi|194177856|gb|EDW91467.1| GE13836 [Drosophila yakuba]
Length = 820
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 176/385 (45%), Positives = 249/385 (64%), Gaps = 2/385 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T +L L +F S++E R+E+L +L+ +VK W+K +++ K +
Sbjct: 34 ISLAEPRPEDLQRTDDLRGSLEPYNVFESQDELNHRMEILAKLNTLVKQWVKEISVSKNM 93
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ K++TFGSYRLGV DIDALCV P R D+F F +L++ P V
Sbjct: 94 P-ESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIER-TDYFQSFFEVLKKQPEV 151
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ V +A VPVIK F+G+ +DLL+A+L IP+D D D+LL NLD ++V SLNG
Sbjct: 152 TECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNG 211
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL+LVPNI NFR LR ++ WAK+ GIYSN++G+ GG+ WA+LVAR CQLYPNA
Sbjct: 212 CRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNA 271
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
LV +FF +F+ WKWPNPV+L + VWDPR N DR HLMPIITP+YP
Sbjct: 272 AAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQ 331
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T +++ EF R + +EI G+ W LFE FF +++++ + + ++
Sbjct: 332 NSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQT 391
Query: 364 AGDFRQWKGWVESRLRQLIHMIERD 388
A D +W G VES++R LI +ER+
Sbjct: 392 ADDHLEWCGLVESKVRLLIGNLERN 416
>gi|17985991|ref|NP_536790.1| hiiragi, isoform A [Drosophila melanogaster]
gi|24655907|ref|NP_725919.1| hiiragi, isoform B [Drosophila melanogaster]
gi|116007728|ref|NP_001036562.1| hiiragi, isoform C [Drosophila melanogaster]
gi|7110522|gb|AAF36978.1|AF231704_1 poly A polymerase [Drosophila melanogaster]
gi|9453846|dbj|BAB03279.1| poly A polymerase [Drosophila melanogaster]
gi|21626946|gb|AAF57528.2| hiiragi, isoform A [Drosophila melanogaster]
gi|21626947|gb|AAM68424.1| hiiragi, isoform B [Drosophila melanogaster]
gi|25012374|gb|AAN71296.1| RE09914p [Drosophila melanogaster]
gi|113194668|gb|ABI31107.1| hiiragi, isoform C [Drosophila melanogaster]
gi|211938509|gb|ACJ13151.1| FI03258p [Drosophila melanogaster]
gi|220942518|gb|ACL83802.1| hrg-PA [synthetic construct]
gi|220952732|gb|ACL88909.1| hrg-PA [synthetic construct]
Length = 659
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 177/385 (45%), Positives = 249/385 (64%), Gaps = 2/385 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T EL L +F S++E R+E+L +L+ +VK W+K +++ K +
Sbjct: 34 ISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLVKQWVKEISVSKNM 93
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ K++TFGSYRLGV DIDALCV P R D+F F +L++ P V
Sbjct: 94 P-ESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIER-TDYFQSFFEVLKKQPEV 151
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ V +A VPVIK F+G+ +DLL+A+L IP+D D D+LL NLD ++V SLNG
Sbjct: 152 TECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNG 211
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL+LVPNI NFR LR ++ WAK+ GIYSN++G+ GG+ WA+LVAR CQLYPNA
Sbjct: 212 CRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNA 271
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
LV +FF +F+ WKWPNPV+L + VWDPR N DR HLMPIITP+YP
Sbjct: 272 AAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQ 331
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T +++ EF R + +EI G+ W LFE FF +++++ + + ++
Sbjct: 332 NSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQT 391
Query: 364 AGDFRQWKGWVESRLRQLIHMIERD 388
A D +W G VES++R LI +ER+
Sbjct: 392 ADDHLEWCGLVESKVRLLIGNLERN 416
>gi|392568429|gb|EIW61603.1| polymerase [Trametes versicolor FP-101664 SS1]
Length = 607
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 208/538 (38%), Positives = 305/538 (56%), Gaps = 41/538 (7%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ ++ + T L L + +F SEEE+ R VLGRL ++K ++++V++ +G+
Sbjct: 14 ISTNESSIREKEVTTTLMGELQRQGIFESEEEAKTREIVLGRLAALIKKFVRQVSLSRGL 73
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E A K++TFGSYRLGV GP DID LCV P + TR DDFF L ML+E V
Sbjct: 74 S-EAAANAAGGKIYTFGSYRLGVHGPGADIDTLCVAPRHVTR-DDFFNVLEGMLREMEGV 131
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+++ VP+A VP+I + +G+ +DLL+AQL +IPEDLD D+LL NLDE+++ SLNG
Sbjct: 132 TEVSGVPEAYVPIISTEISGIPIDLLFAQLDLPIIPEDLDLQDDNLLRNLDEKSIRSLNG 191
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RV + IL LVPN+ FR+ LRC++ WA++R +YSN GFLGG+ WA+LVARVCQLYPNA
Sbjct: 192 SRVINEILRLVPNVDVFRTALRCIKLWAQKRAVYSNVNGFLGGVAWAMLVARVCQLYPNA 251
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ +VSRFF I W WP PV+L PI+ + VW+P+ +DR H MPIITP+YP
Sbjct: 252 VAGAIVSRFFVIMHKWSWPQPVLLKPIEDGPLQVRVWNPKVYSQDRSHRMPIITPAYPSM 311
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++NV +T +IM+EEFQR + +++ GK W LF + FF ++ YLQ+ A+++
Sbjct: 312 CATHNVMQSTQQIMKEEFQRGCAIVDDVMLGKAEWSALFVKHDFFQRYRFYLQVVAASRD 371
Query: 364 AGDFRQWKGWVESRLRQLIHMIE------------RDMGGVLQC---------------- 395
+W G V S++RQL+ +E + V C
Sbjct: 372 LEMQNKWSGTVASKIRQLVMRLEYVDALKLAHPFIKGFDVVYYCLSEEEAQVVTRGEIPP 431
Query: 396 ----RLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYS 451
R + V + +F+GL K + G + RL + + V M
Sbjct: 432 AVAQRKKEDVADKEGVITVHTTSFFIGLSIKPKEAGSTGPR---RLDISYPTTEFVKMTK 488
Query: 452 SWKQ----GMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKSES 505
W++ M I V H++ +PDFVF G R S K+ + I+ + K+S +
Sbjct: 489 MWEKYDESAMHIAVRHIKHTVLPDFVFEPGEREAASRPTKRSRSIKDSPAPATKRSRT 546
>gi|123980646|gb|ABM82152.1| poly(A) polymerase beta (testis specific) [synthetic construct]
gi|123995471|gb|ABM85337.1| poly(A) polymerase beta (testis specific) [synthetic construct]
Length = 636
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 217/551 (39%), Positives = 316/551 (57%), Gaps = 16/551 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D + T+ L + L +F EEE R+ VL +L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLDKLNNLVKEWIREISESKSL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDR-SDFFTSFYAKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 324 NSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAST 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN + + +GLG
Sbjct: 384 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWVIGLG 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ P + E + LT ++ F V + ++ GM+I HLR +++ + P
Sbjct: 443 LKK---PDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAVHLRRKELHQ-LLP 498
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
V K + + +R+ + + S S +S ++G + S G ++ P
Sbjct: 499 HHVLQDKKAHSTEGRRLTDLNDSSFDLSAGCENSMSVPSSTSTMKTGPLISSSQG-RNSP 557
Query: 536 SVEPSTSSVSS 546
++ T+SV++
Sbjct: 558 ALAVMTASVAN 568
>gi|34193801|gb|AAH36653.2| Poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 217/551 (39%), Positives = 316/551 (57%), Gaps = 16/551 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D + T+ L + L +F EEE R+ VL +L+ +VK+WI+ ++ K +
Sbjct: 27 ISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLDKLNNLVKEWIREISESKSL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 87 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDR-SDFFTSFYAKLKLQEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 145 KDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 265 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 325 NSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAST 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN + + +GLG
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWVIGLG 443
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ P + E + LT ++ F V + ++ GM+I HLR +++ + P
Sbjct: 444 LKK---PDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAVHLRRKELHQ-LLP 499
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
V K + + +R+ + + S S +S ++G + S G ++ P
Sbjct: 500 HHVLQDKKAHSTEGRRLTDLNDSSFDLSAGCENSMSVPSSTSTMKTGPLISSSQG-RNSP 558
Query: 536 SVEPSTSSVSS 546
++ T+SV++
Sbjct: 559 ALAVMTASVAN 569
>gi|409050023|gb|EKM59500.1| hypothetical protein PHACADRAFT_250043 [Phanerochaete carnosa
HHB-10118-sp]
Length = 556
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 201/491 (40%), Positives = 279/491 (56%), Gaps = 43/491 (8%)
Query: 30 FASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGP 89
F SEEES R VLGRL ++K ++ ++++ G+S E A K+FTFGSYRLGV GP
Sbjct: 42 FESEEESKTREIVLGRLASLIKKFVHKISLQHGLS-EAAADAAGGKIFTFGSYRLGVHGP 100
Query: 90 STDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLL 149
TDID LCV P + +R +DFF L ML+ET V ++T VP+A VP++ K +G+ +DL
Sbjct: 101 GTDIDTLCVVPKHVSR-EDFFEALEPMLRETEGVTEVTGVPEAYVPIVTTKISGIPIDLT 159
Query: 150 YAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRF 209
A+L S IP+DL D+LL NLDE+ + SLNG RVTD IL LVPN+ FR LRC++
Sbjct: 160 MARLALSSIPDDLTLQDDNLLRNLDERCIRSLNGSRVTDEILRLVPNVEVFRDALRCIKL 219
Query: 210 WAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCP 269
WA+++ IYSN GFLGG+ WA+LVAR+CQLYP+A+ +VSRFF I W WP PV+L
Sbjct: 220 WAQKKAIYSNVNGFLGGVAWAMLVARICQLYPSAVAGAIVSRFFIIMYQWSWPQPVLLKQ 279
Query: 270 IQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCE 329
I+ +P VW+PR DR H MPIITP+YP +++NVS +T IM EEF++ E+ E
Sbjct: 280 IEDGPLPVRVWNPRLYPADRSHRMPIITPAYPSMCATHNVSQSTQMIMTEEFKKGSEIVE 339
Query: 330 EIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFR-QWKGWVESRLRQLIHMIE-- 386
++ G W LF + FF ++ YLQ+ IA+ D +W G VESR+RQL+ +E
Sbjct: 340 KVIMGTTQWSELFVKHDFFHKYRYYLQV-IASTGDPDLHIKWAGTVESRIRQLVMKLEYV 398
Query: 387 ----------RDMGGVLQC-------RLYPGDFSENSVKSSSQ-------------CHYF 416
+ V C G+ S+ K + ++
Sbjct: 399 DSLTLAHPFVKGFEQVTHCLTDDEVRDAAQGEISDAIAKRKKEDIEGKEGASVVYSTTFY 458
Query: 417 MGLG----RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDF 472
+GL + V P+ + D+ EF V + M I V H++ +PD
Sbjct: 459 IGLAIEPKQAGAVGPR---RLDISYPTTEFTKQVKMWEKYDESAMGIVVRHIKSTALPDH 515
Query: 473 VFPGGVRPPKS 483
VF G R P+S
Sbjct: 516 VFDEGERQPRS 526
>gi|326914719|ref|XP_003203670.1| PREDICTED: poly(A) polymerase gamma-like [Meleagris gallopavo]
Length = 860
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 212/600 (35%), Positives = 346/600 (57%), Gaps = 28/600 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L +++ +F EEE R+ VL +L+ +VK+WI + K +
Sbjct: 162 ISLAPPKDIDYIHTQKLVEVMESFGVFEDEEELNHRLVVLCKLNNLVKEWIFELGESKNL 221
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
++ ++FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 222 P-PSVVENVGGRIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQEEI 279
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
++L V DA VPV+KF+F+G+ +DLL+A+L + ++LD DS L +LD + + SLNG
Sbjct: 280 KNLRAVEDAYVPVVKFEFDGIEIDLLFARLPVQTVSDNLDLRDDSRLRSLDIRCIRSLNG 339
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN NF+ TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQL+PNA
Sbjct: 340 CRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLHPNA 399
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
L + LV++FF IF+ W+WPNPV+L + + VWDPR N DR H+MPIITP+YP
Sbjct: 400 LASTLVNKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPAYPQQ 459
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T ++ EE + + EI GK W LFE +FF +K+Y+ + +
Sbjct: 460 NSTYNVSTSTRAVVVEELKHGLAVTNEILQGKSDWPKLFEQPNFFQKYKHYIVLTASTYT 519
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMG---GVLQCRLYPGDFSENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +ER+ + + +PG+ E+ +S +F+G+
Sbjct: 520 EEHHLEWVGLVESKIRVLVGNLERNEFINIAHVNPQSFPGN-QEHCKQSRYVSMWFLGII 578
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ + + K D+ ++ F V ++ K+GM+I ++++ + + F+
Sbjct: 579 FRK-LENTESTKIDLTYDIQSFTDAVYRQANNINMLKEGMKIETAYVKRKHLHYFL---- 633
Query: 478 VRPPKSLNEKKRKRIEVIEST----KLKKSESSTAGHSSGQKSSQTE-SGVALDGSHGLK 532
P +L ++K++ I I + K++ S+ + +SS +S+T + +L+ L
Sbjct: 634 --PAGTLQKRKKQSILNISQNATGLRCKRASSNESLNSSRDDNSRTSYNSSSLNMLSKLD 691
Query: 533 SGPSVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGT 592
+ + +++ ++R + V++ + VS+ + +G+ + AA+A T
Sbjct: 692 TSTAEMERNATIWRRNGTNNREKMTHVAV-------SPVSKGISIPVIGSKMEAAVAIRT 744
>gi|297679796|ref|XP_002817705.1| PREDICTED: poly(A) polymerase beta [Pongo abelii]
Length = 637
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 217/551 (39%), Positives = 317/551 (57%), Gaps = 16/551 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D + T+ L + L +F E E R+ VL +L+ +VK+WI+ ++ K +
Sbjct: 27 ISLAVPKETDCLLTQRLIETLRPFGVFEEEGELQRRILVLEKLNNLVKEWIREISESKSL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 87 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDR-SDFFTSFYAKLKLQEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 265 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 325 NSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIILLASAST 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GLG
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLG 443
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ P++ E + LT ++ F V + ++ GM+I HLR +++ + P
Sbjct: 444 LKK---PENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKELHQ-LLP 499
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
V K + + +R+ + + S S +S ++G + S G ++ P
Sbjct: 500 HHVLQDKKAHSTEGRRLTDLNDSSFGLSAGCENSMSVPSSTSTMKTGPLISSSQG-RNSP 558
Query: 536 SVEPSTSSVSS 546
++ T+SV++
Sbjct: 559 ALAIMTASVAN 569
>gi|332864603|ref|XP_003318331.1| PREDICTED: poly(A) polymerase beta [Pan troglodytes]
gi|397498031|ref|XP_003819800.1| PREDICTED: poly(A) polymerase beta [Pan paniscus]
Length = 637
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 217/551 (39%), Positives = 316/551 (57%), Gaps = 16/551 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D + T+ L + L +F EEE R+ VL +L+ +VK+WI+ ++ K +
Sbjct: 27 ISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREISESKSL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 87 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDR-SDFFTSFYAKLKLQEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 265 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 325 NSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAST 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN + +GLG
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFCTMWVIGLG 443
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ P++ E + LT ++ F V + ++ GM+I HLR +++ + P
Sbjct: 444 LKK---PENSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAMHLRRKELHQ-LLP 499
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
V K + + +R+ + + S S +S ++G + S G ++ P
Sbjct: 500 HHVLQDKKAHSTEGRRLTDLNDSSFDLSAGCENSMSVPSSTSTMKTGPLISSSQG-RNSP 558
Query: 536 SVEPSTSSVSS 546
++ T+SV++
Sbjct: 559 ALAVVTASVAN 569
>gi|18203318|sp|Q9NRJ5.1|PAPOB_HUMAN RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
gi|8895537|gb|AAF81013.1|AF218840_1 testis-specific poly(A) polymerase [Homo sapiens]
gi|41474575|gb|AAS07561.1| unknown [Homo sapiens]
Length = 636
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 217/551 (39%), Positives = 316/551 (57%), Gaps = 16/551 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D + T+ L + L +F EEE R+ VL +L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREISESKSL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDR-SDFFTSFYAKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 324 NSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAST 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN + + +GLG
Sbjct: 384 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWVIGLG 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ P + E + LT ++ F V + ++ GM+I HLR +++ + P
Sbjct: 443 LKK---PDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAMHLRRKELHQ-LLP 498
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
V K + + +R+ + + S S +S ++G + S G ++ P
Sbjct: 499 HHVLQDKKAHSTEGRRLTDLNDSSFDLSAGCENSMSVPSSTSTMKTGPLISSSQG-RNSP 557
Query: 536 SVEPSTSSVSS 546
++ T+SV++
Sbjct: 558 ALAVMTASVAN 568
>gi|77874206|ref|NP_064529.4| poly(A) polymerase beta [Homo sapiens]
gi|51094718|gb|EAL23967.1| poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 217/551 (39%), Positives = 316/551 (57%), Gaps = 16/551 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D + T+ L + L +F EEE R+ VL +L+ +VK+WI+ ++ K +
Sbjct: 27 ISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREISESKSL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 87 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDR-SDFFTSFYAKLKLQEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 265 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 325 NSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAST 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN + + +GLG
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWVIGLG 443
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ P + E + LT ++ F V + ++ GM+I HLR +++ + P
Sbjct: 444 LKK---PDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAMHLRRKELHQ-LLP 499
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
V K + + +R+ + + S S +S ++G + S G ++ P
Sbjct: 500 HHVLQDKKAHSTEGRRLTDLNDSSFDLSAGCENSMSVPSSTSTMKTGPLISSSQG-RNSP 558
Query: 536 SVEPSTSSVSS 546
++ T+SV++
Sbjct: 559 ALAVMTASVAN 569
>gi|54020874|ref|NP_001005684.1| poly(A) polymerase gamma [Xenopus (Silurana) tropicalis]
gi|49522894|gb|AAH75107.1| poly(A) polymerase beta (testis specific) [Xenopus (Silurana)
tropicalis]
Length = 752
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 226/602 (37%), Positives = 330/602 (54%), Gaps = 36/602 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D I T++L + + +F + E R+ VLG+L+ +VK+WI + K +
Sbjct: 24 ISLAGPKDTDHIYTQKLTEAMRPFGVFEDDAELSHRMVVLGKLNNLVKEWIGELGEQKSL 83
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
I K+FTFGSYRLGV DID+LCV P + R DFF L++ +
Sbjct: 84 P-PSIISAVGGKIFTFGSYRLGVHTKGADIDSLCVAPRHVER-SDFFQSFSEKLKQQDGI 141
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
++L V DA VPVIKF+F +DL++A+L IP++LD DS L NLD + + SLNG
Sbjct: 142 KNLRAVEDAFVPVIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDSRLRNLDIRCIRSLNG 201
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN NFR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 202 CRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 261
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 262 IASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPIITPAYPQQ 321
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI G+ W LFEP +FF +K+Y+ + +A
Sbjct: 322 NSTYNVSISTRSVMVEEFKQGLSVTDEILLGRCDWSKLFEPPNFFHKYKHYIVLTASAST 381
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCH---YFMGLG 420
+W G VES++R L+ +ER+ + + P F N + +F+G+
Sbjct: 382 EEHHLEWVGLVESKIRVLVGNLERN-SFITLAHVNPQSFPGNRDHCKDNEYVSMWFLGII 440
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
K+ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 441 FKK-VENAESVNIDLTHDIQSFTDTVYRQANNINMLKKGMRIEATHVKRKQLHHYL---- 495
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTE-SGVALDGSHGLKSG-P 535
EV++ K K+S +S S +T G LD S +G P
Sbjct: 496 -------------HAEVLQKRK-KQSVPDINRSASALLSKRTSLDGNCLDSSRDTDTGTP 541
Query: 536 SVEPSTSSVSSSTSASSRP--QRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTI 593
P++ SS + + S P QR ++ +T +T SQ V A A L+ I
Sbjct: 542 CDSPTSCHKSSRSDSPSLPDAQRQSLLEKT----STGCSQKMADVHVHAEPAQGLSIPVI 597
Query: 594 SS 595
S
Sbjct: 598 GS 599
>gi|449504503|ref|XP_002200600.2| PREDICTED: poly(A) polymerase alpha [Taeniopygia guttata]
Length = 850
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 211/508 (41%), Positives = 299/508 (58%), Gaps = 20/508 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 136 ISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 195
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L++ V
Sbjct: 196 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFTSFYEKLKQQEEV 253
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 254 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 313
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 314 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 373
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 374 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 433
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 434 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 493
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 494 EKQRLEWVGLVESKIRILVGNLEKNEFITL-AHVNPQSFPAPKENPDKEEYRTMWVIGLV 552
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWK---QGMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 553 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAARHVKRKQLHQLL-- 607
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS 503
P L +KK+ E I T L S
Sbjct: 608 ----PNHVLQKKKKHSTEGIRLTALNDS 631
>gi|326921016|ref|XP_003206760.1| PREDICTED: poly(A) polymerase alpha-like [Meleagris gallopavo]
Length = 752
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 209/508 (41%), Positives = 301/508 (59%), Gaps = 20/508 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP +D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 39 ISLAAPKEIDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 98
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L++ V
Sbjct: 99 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFTSFYEKLKQQEEV 156
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 157 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 216
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 217 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 276
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 277 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 336
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 337 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 396
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 397 EKQRLEWVGLVESKIRILVGNLEKNEFITL-AHVNPQSFPAPKENPDKEEYRTMWVIGLV 455
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + ++ M+I H++ + + +
Sbjct: 456 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAARHVKRKQLHQLL-- 510
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS 503
P L +KK+ E + T L S
Sbjct: 511 ----PNHVLQKKKKHSTEGVRLTALNDS 534
>gi|363731198|ref|XP_003640929.1| PREDICTED: poly(A) polymerase gamma-like [Gallus gallus]
Length = 716
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 212/599 (35%), Positives = 342/599 (57%), Gaps = 32/599 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + + +F EEE R+ VL +L+ +VK+WI + K +
Sbjct: 24 ISLAPPKDIDYIHTQKLVEAMESFGVFEDEEELNHRLVVLCKLNNLVKEWIFELGESKNL 83
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
++ ++FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 84 P-PSVVENVGGRIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQEEI 141
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
++L V DA VPV+KF+F+G+ +DL++A+L + ++LD DS L +LD + + SLNG
Sbjct: 142 KNLRAVEDAYVPVVKFEFDGIEIDLVFARLPVQTVSDNLDLRDDSRLRSLDIRCIRSLNG 201
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN NF+ TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQL+PNA
Sbjct: 202 CRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLHPNA 261
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
L + LV +FF IF+ W+WPNPV+L + + VWDPR N DR H+MPIITP+YP
Sbjct: 262 LASTLVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPAYPQQ 321
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T ++ EE + + EI G+ W LFE +FF +K+Y+ + +
Sbjct: 322 NSTYNVSTSTRAVVVEELKHGLAVTNEILQGRSDWPKLFEQPNFFQKYKHYIVLTASTYT 381
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMG---GVLQCRLYPGDFSENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +ER+ + + +PG+ E+ +S +F+G+
Sbjct: 382 EEHHLEWVGLVESKIRVLVGNLERNEFINIAHVNPQSFPGN-QEHCKQSRYVSMWFLGII 440
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ + + K D+ ++ F V ++ K+GM+I ++++ + + F+
Sbjct: 441 FRK-LESAESTKIDLTYDIQSFTDAVYRQANNINMLKEGMKIETAYVKRKHLHYFL---- 495
Query: 478 VRPPKSLNEKKRKRIEVIEST----KLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKS 533
P +L ++K++ + I + K++ S+ + +SS S+T S L
Sbjct: 496 --PAGTLQKRKKQSMLNISQNASGLRCKRASSNESLNSSRDNHSRTPY-----NSSSLSM 548
Query: 534 GPSVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGT 592
++ ST+ + + A++R + V + + VS+ + +G+ + AA+A T
Sbjct: 549 ISKLDTSTAEMERTNGANNREKMTHVPV-------SPVSKGISIPVIGSKMEAAVAIRT 600
>gi|393215900|gb|EJD01391.1| poly polymerase [Fomitiporia mediterranea MF3/22]
Length = 629
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 207/510 (40%), Positives = 289/510 (56%), Gaps = 41/510 (8%)
Query: 5 STSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGIS 64
ST A + V EL + + F SEEE+ R VLGR+ +VK ++ +V + +G+S
Sbjct: 21 STDAEKKVTVAMMDELRR----QGTFESEEEARTRELVLGRVATLVKKFVHKVALSRGLS 76
Query: 65 DEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVE 124
E A K+FTFGSYRLGV GP +DID LCV P + +R +DFF ML+E V
Sbjct: 77 -ESAAAAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSR-EDFFEVFEPMLREVEGVS 134
Query: 125 DLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGC 184
+++ VP+A VP+IK K G+ +D L A+L S IP+DL D+LL NLDE+ + SLNG
Sbjct: 135 EVSGVPEAYVPIIKIKIQGIPIDFLMARLALSSIPDDLSLRDDNLLKNLDERCIRSLNGS 194
Query: 185 RVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNAL 244
RVTD IL LVPN+ FR LRC++ WA+RR IYSN GFLGG+ WA+LVAR+CQLYPNA+
Sbjct: 195 RVTDEILRLVPNVAVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNAV 254
Query: 245 PNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTN 304
+VSRFF I W WP PV+L I+ + VW+PR DR H MPIITP+YP
Sbjct: 255 AGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPRLYPGDRSHRMPIITPAYPAMC 314
Query: 305 SSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNA 364
+++NV+ +T IM EEF+R ++ ++I G W LF + FF ++ YLQI + N
Sbjct: 315 ATHNVTESTQMIMTEEFKRGADIVDKIVFGSLQWSALFAKHDFFHKYRYYLQIIASTGNP 374
Query: 365 GDFRQWKGWVESRLRQLIHMIE------------RDMGGVLQC------RL-YPGDFSEN 405
+W G VESR+RQL+ +E + L C RL G+ E
Sbjct: 375 DLQIKWAGTVESRIRQLVMKLEYVDALTLAHPFIKGFDQTLHCLNDEEVRLCASGEVPEA 434
Query: 406 SVK----------SSSQCH---YFMGLGRKQGVSPQDG-EKFDMRLTVEEFKSHVVWMYS 451
++ +S H +F+GL + G + D+ EF + +V M+
Sbjct: 435 VLRRKKEEAEGKEGASTVHTTTFFIGLAIEPKQPGSTGPRRLDISYPTTEF-TKLVKMWD 493
Query: 452 SWKQ-GMQIHVSHLRCQDIPDFVFPGGVRP 480
+ + M I V H++ +PD+VF G +P
Sbjct: 494 KYDESSMGIVVRHIKNSSLPDYVFEEGAKP 523
>gi|426355375|ref|XP_004045099.1| PREDICTED: poly(A) polymerase beta [Gorilla gorilla gorilla]
Length = 637
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 216/550 (39%), Positives = 315/550 (57%), Gaps = 16/550 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D + T+ L + L +F EEE R+ VL +L+ +VK+WI+ ++ K +
Sbjct: 27 ISLAVPKETDCLLTRRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREMSESKSL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ + K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 87 P-QSVTENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDR-SDFFASFYAKLKLQEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 265 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 325 NSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAST 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN + + +GLG
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWVIGLG 443
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ P++ E + LT ++ F V + ++ GM+I HLR +++ + P
Sbjct: 444 LKK---PENSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAMHLRRKELHQ-LLP 499
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
V K + + +R+ + + S S +S ++G + S G ++ P
Sbjct: 500 HHVLQDKKAHSPEGRRLTDLNDSSFDLSAGCENSMSVPSSTSTMKTGPLISSSQG-RNSP 558
Query: 536 SVEPSTSSVS 545
++ T+SV+
Sbjct: 559 ALAVMTASVA 568
>gi|310750335|ref|NP_001185530.1| poly(A) polymerase alpha [Gallus gallus]
Length = 737
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 209/508 (41%), Positives = 300/508 (59%), Gaps = 20/508 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 25 ISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L++ V
Sbjct: 85 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFTSFYEKLKQQEEV 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 143 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 323 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 383 EKQRLEWVGLVESKIRILVGNLEKNEFITL-AHVNPQSFPAPKENPDKEEYRTMWVIGLV 441
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + ++ M+I H++ + + +
Sbjct: 442 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAARHVKRKQLHQLL-- 496
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS 503
P L +KK+ E + T L S
Sbjct: 497 ----PNHVLQKKKKHSTEGVRLTALNDS 520
>gi|71023817|ref|XP_762138.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
gi|46101730|gb|EAK86963.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
Length = 667
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 209/531 (39%), Positives = 290/531 (54%), Gaps = 64/531 (12%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
I+T+ PT ++ TK L L + +F S+EES R +LG+LD +VKD++ RV++ G+
Sbjct: 26 IATNGPTSREIEVTKTLVAELEKQGVFESDEESKIREVILGKLDAMVKDFVYRVSISHGM 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E + A K+FTFGSYRLGV GP +DID LCV P + R +DFF ML+E V
Sbjct: 86 S-ETLARSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVQR-EDFFSVFESMLKEREEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
++ VP A VP+I KF GV +D +A+L + ++L D+LL NLDE+ V SL G
Sbjct: 144 TEVAGVPTAHVPLIAAKFMGVDIDFTFARLALPRVEDNLSLEDDNLLRNLDERDVRSLGG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVPNI FR LRC++ WA+RR IYSN MGFLGG+ WA+L AR+CQLYPN
Sbjct: 204 SRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWAMLTARICQLYPNE 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+VSRFF I WKWP PV+L I+ + VW+P+ DR H MPIITP+YP
Sbjct: 264 AAGAIVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMPIITPAYPGM 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++NVS +T +M EF+RA E+ + + GK W LF + FF +K YLQ+ IA+
Sbjct: 324 CATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTNWDELFAKHDFFFKYKYYLQV-IASSG 382
Query: 364 AGDFR-QWKGWVESRLRQLIHMIE------------RDMGGVLQC------RLYP-GDFS 403
+ D + +W G VES++RQL+ +E + V +C RL GD
Sbjct: 383 SADLQLKWHGTVESKIRQLVMKLELVPTITCAHPFIKGFDQVSECWNDHEVRLVATGDIP 442
Query: 404 EN--------------------------SVKSSSQCH-------YFMGLGRKQGVSPQDG 430
E V + H +++GL + ++ +
Sbjct: 443 EEVAQRTQKVAALPETDEAKQAAAEEAARVTEGKEGHRMIYTTTFYIGLSIEPKLAGEGP 502
Query: 431 EKFDMRLTVEEFKSHVVWMYSSWKQ----GMQIHVSHLRCQDIPDFVFPGG 477
K D+ EF V W+Q M I V H++ +P +VF GG
Sbjct: 503 RKLDISYPTAEFTGKV----KQWEQYDEASMGIVVRHIKWTQLPGYVFEGG 549
>gi|395329948|gb|EJF62333.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 606
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 212/527 (40%), Positives = 300/527 (56%), Gaps = 48/527 (9%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
ISTS + T L + L + +F SEEE+ R VLGRL ++K ++KRV++ +G+
Sbjct: 14 ISTSESNPREKEVTVTLLEELRRQGIFESEEEAKMREIVLGRLAALIKKFVKRVSLARGL 73
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E A K++TFGSYRLGV GP TDID LCV P + TR +DFF L ML+E V
Sbjct: 74 S-ESAANSAGGKIYTFGSYRLGVHGPGTDIDTLCVVPRHVTR-EDFFNVLEGMLREMEGV 131
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+++ VP+A VP+IK + +G+ +DLL+AQL + IP+DLD D+LL NLDE+ V SLNG
Sbjct: 132 TEVSGVPEAFVPIIKTEISGIPIDLLFAQLSLAAIPDDLDLRDDNLLKNLDERCVRSLNG 191
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RV + IL LVPN+ FR LRC++ WA+RR IYSN GFLGG+ WA+LVAR+CQLYPNA
Sbjct: 192 SRVINEILRLVPNVDVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNA 251
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ +VSRFF I W WP PV+L PI+ + VW+PR +DR H MPIITP+YP
Sbjct: 252 VAGAIVSRFFIIMHRWSWPQPVLLKPIEDGPLQVRVWNPRLYPQDRNHRMPIITPAYPSM 311
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++NV ++T +IM EEF+R E+ +++ +G+ W LF + FF ++ YLQ+ ++ +
Sbjct: 312 CATHNVMASTQQIMTEEFKRGSEIVDQVISGEVQWSALFAKHDFFFRYRFYLQVIASSPD 371
Query: 364 AGDFRQWKGWVESRLRQLIHMIE------------RDMGGVLQCRLYPGDFSENSVKSSS 411
+W G VES++RQL+ +E + V C SE+ ++ +
Sbjct: 372 LDTQNKWSGTVESKIRQLVMRLEFVDTLKLAHPFIKGFDTVYYC------LSEDETRAVA 425
Query: 412 QCH--------------------------YFMGLGRKQGVSPQDG-EKFDMRLTVEEFKS 444
+ +F+GL K + G K D+ EF
Sbjct: 426 RGEIPEAVANRKQEDIAGKEGATTMYTKSFFVGLSIKPKEAGATGPRKLDISYPTNEFIK 485
Query: 445 HVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKR 491
V + M I V H++ +PDFVF G R + KKR R
Sbjct: 486 MVRLWEKYDESQMNIVVRHIKHTALPDFVFDKGER-EAAARPKKRSR 531
>gi|412986520|emb|CCO14946.1| predicted protein [Bathycoccus prasinos]
Length = 632
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 194/497 (39%), Positives = 279/497 (56%), Gaps = 30/497 (6%)
Query: 5 STSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGIS 64
S+ LD+ TKEL+ +L E ++ S+ E R EVLG L+ +++DWI+ ++ KG
Sbjct: 18 SSGGLGALDIKRTKELDSLLKLEDVYESQSECTRREEVLGELNEMLQDWIRTRSLSKGHP 77
Query: 65 DEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFG--------KLFRM 116
DE L+TFGSYRLGV GP+ DID+L +GP + R +DFFG +
Sbjct: 78 DES----IRCNLYTFGSYRLGVHGPAADIDSLVIGPKHIDRAEDFFGFEEDDFEGSFYDY 133
Query: 117 LQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDLDSLQDSLLHNLDE 175
+++ E + VPDA VP +K +F G +D+ Y L +S +P DLD L +LH LD+
Sbjct: 134 MRKHEGTEKIVAVPDAVVPELKTEFRGFEIDVAYCSLPGYSNVPLDLDVLSAKILHGLDD 193
Query: 176 QTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVAR 235
V SL GCRV D +L LV N +R LR LR WA RRG+YSN +GF GG+N A+LVAR
Sbjct: 194 AGVKSLAGCRVADSLLKLVTNHSEYRIALRALRLWAARRGVYSNVVGFFGGVNLAILVAR 253
Query: 236 VCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPI------QYQAMPHHVWDPRSNQRDR 289
VCQLYPNA ++LV FF+I+ +W W PVML + Q + H WD R N+ +R
Sbjct: 254 VCQLYPNASASMLVYSFFQIWDNWVWTTPVMLTSLDIAPKDQIPGLRH--WDERVNKPER 311
Query: 290 KHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG 349
LM IITP+YP NS++NVSS+TL +++ EF+R K + ++ G+ W ++ FF
Sbjct: 312 YQLMKIITPAYPAQNSTFNVSSSTLEVLKREFKRGKIVTGKVLIGEAKWTDVWSDVQFFA 371
Query: 350 SFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKS 409
+K YLQ+ + A N DF++W+GWV SRL+ L+ +E G + F +
Sbjct: 372 KYKTYLQLIVTADNEEDFKKWEGWVGSRLKNLVQGVETFSEGAMMAHPGVKKFYDPEKDK 431
Query: 410 SSQCHYFMGLGRKQGVSPQDG---EKFDMRLTVEEFKSHVVWMYS------SWKQGMQIH 460
C+ F GL + D +K ++ +E F+ V +WK GM +
Sbjct: 432 EVHCNVFFGLFPNPSTTSGDAREKKKINLNPAIENFQMTVGNYIDRATGSVNWKPGMGVQ 491
Query: 461 VSHLRCQDIPDFVFPGG 477
+ LR +DIP + P G
Sbjct: 492 IKLLRKKDIPSWALPEG 508
>gi|164661493|ref|XP_001731869.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
gi|159105770|gb|EDP44655.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
Length = 527
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 186/384 (48%), Positives = 251/384 (65%), Gaps = 4/384 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT D+ T LE L +F S EE+ R VLGR+D +VK+++ R ++ G+
Sbjct: 14 ISMNGPTEKDLEVTNALEAELRANNVFESPEEAKLREVVLGRVDALVKEFVYRASIKHGL 73
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E + + K+FTFGSYRLGV GP +DID LCV P + R +DFF +LQ V
Sbjct: 74 S-ESAARASGGKIFTFGSYRLGVHGPGSDIDTLCVAPKHVQR-EDFFEIFEALLQARDDV 131
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
++T VP+A VP+IK KF G+S+D L++++ I + L+ D+LL NLDE+ V SL G
Sbjct: 132 TEVTSVPEAYVPLIKTKFMGISIDFLFSRIALPRIDDSLELRDDNLLKNLDERDVRSLGG 191
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVPN+ FR LRC++ WA RR IYSN +GFLGG+ WA+LVAR+CQLYPN
Sbjct: 192 SRVTDEILHLVPNVYVFRLALRCIKLWASRRAIYSNVLGFLGGVAWAMLVARICQLYPNE 251
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ +VSRFF I WKWP PV+L I+ +P VW+PR DR H MPIITP+YP
Sbjct: 252 VAGAIVSRFFIILLQWKWPQPVLLKQIEDGPLPIRVWNPRLYPTDRLHRMPIITPAYPSM 311
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++NV+ +T +M EEF+R E+ + I GK +W LFE FF +K YLQ+ IA+
Sbjct: 312 CATHNVTQSTQMVMTEEFRRGSEVVDRIFRGKTSWNELFEKNDFFHKYKYYLQV-IASSG 370
Query: 364 AGDFR-QWKGWVESRLRQLIHMIE 386
+ D + +W+G VESRLRQLI +E
Sbjct: 371 SADLQLKWQGTVESRLRQLIMKLE 394
>gi|345325876|ref|XP_001511509.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Ornithorhynchus anatinus]
Length = 740
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 223/567 (39%), Positives = 322/567 (56%), Gaps = 27/567 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D I T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 27 ISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 87 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYEKLKLQEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 265 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 325 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 385 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 443
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWK---QGMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 444 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHVKRKQLHQLL-- 498
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS------ESSTAGHSSGQKSSQTESGVALDGSH 529
P L +KK+ +E + T L S +S + S+ S + GS
Sbjct: 499 ----PNHVLQKKKKHSMEGVRLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSS 554
Query: 530 GLKSGPSVEPSTSSVSS-STSASSRPQ 555
++ P+ + +SV++ S S PQ
Sbjct: 555 QGRNSPAPAVTAASVTNIPASEVSVPQ 581
>gi|403287191|ref|XP_003934837.1| PREDICTED: poly(A) polymerase beta [Saimiri boliviensis
boliviensis]
Length = 634
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 225/605 (37%), Positives = 337/605 (55%), Gaps = 23/605 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D + T+ L + L +F EEE R+ VL +L+ +VK+WI+ ++ K +
Sbjct: 24 ISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREISESKSL 83
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ ++ K+FTFGSYRLGV DIDALC+ P + R DFF + L+ V
Sbjct: 84 P-QSILENVGGKIFTFGSYRLGVHTKGADIDALCIAPRHVDR-SDFFTSFYAKLKLQEEV 141
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 142 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 201
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 202 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 261
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 262 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 321
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 322 NSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPT 381
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 382 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 440
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ P++ E + LT ++ F V + K GM+I HLR +++ + P
Sbjct: 441 LKK---PENSEILSIDLTYDIQSFTDTVYRQAMNSKMFETGMKIAAMHLRRKELHQ-LLP 496
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
V K + + +R+ + + S S +S ++G S G ++ P
Sbjct: 497 HHVLQEKKAHSTEGRRLTDLNDSSFDLSAGGENSISVPSSTSTMKTGPLTSSSQG-RNSP 555
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAA---LATGT 592
S+ T+SV++ + Q+ + T + + T+++++ +A + + T
Sbjct: 556 SLAVMTASVANIQATEISLQQ----VNTSESSGTALNESIPHAVSQPAIAPSPKPMVTRV 611
Query: 593 ISSFC 597
+SS C
Sbjct: 612 VSSTC 616
>gi|62822283|gb|AAY14832.1| unknown [Homo sapiens]
Length = 465
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 190/442 (42%), Positives = 274/442 (61%), Gaps = 7/442 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS ++P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 441
Query: 421 RKQGVSPQDGEKFDMRLTVEEF 442
++ V + D+ ++ F
Sbjct: 442 FRR-VENAESVNIDLTYDIQSF 462
>gi|449280702|gb|EMC87938.1| Poly(A) polymerase alpha, partial [Columba livia]
Length = 736
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 210/508 (41%), Positives = 298/508 (58%), Gaps = 20/508 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 23 ISLAAPKESDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 82
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L++ V
Sbjct: 83 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFTSFYEKLKQQEEV 140
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 141 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 200
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 201 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 260
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 261 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 320
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 321 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 380
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 381 EKQRLEWVGLVESKIRILVGNLEKNEFITL-AHVNPQSFPAPKENPDKEEYRTMWVIGLV 439
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWK---QGMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 440 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAARHVKRKQLHQLL-- 494
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS 503
P L +KK+ E I L S
Sbjct: 495 ----PSHVLQKKKKHSTEGIRLATLNDS 518
>gi|354482269|ref|XP_003503321.1| PREDICTED: poly(A) polymerase alpha [Cricetulus griseus]
Length = 742
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 225/579 (38%), Positives = 321/579 (55%), Gaps = 31/579 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 29 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 88
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 89 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 146
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 147 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 206
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 207 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 266
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 267 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 326
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 327 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 386
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 387 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 445
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 446 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL-- 500
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
P L ++K+ E ++ T L S + S S + + S
Sbjct: 501 ----PSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT-----------SAM 545
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQA 574
P SS SS S P A S+ + + SV QA
Sbjct: 546 KTSPLNSSGSSQGRNSPAPAVTAASVTSIQASEVSVPQA 584
>gi|355693555|gb|EHH28158.1| hypothetical protein EGK_18525, partial [Macaca mulatta]
gi|355778841|gb|EHH63877.1| hypothetical protein EGM_16936, partial [Macaca fascicularis]
Length = 745
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 226/578 (39%), Positives = 318/578 (55%), Gaps = 31/578 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D I T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 443 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
P L +KK+ E ++ T L S + S S + + S
Sbjct: 498 ----PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT-----------SAT 542
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQ 573
P SS SS S P A S+ SV Q
Sbjct: 543 KTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQ 580
>gi|218847770|ref|NP_001136382.1| poly(A) polymerase alpha [Xenopus (Silurana) tropicalis]
gi|197246240|gb|AAI68811.1| Unknown (protein for MGC:188992) [Xenopus (Silurana) tropicalis]
Length = 732
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 209/508 (41%), Positives = 302/508 (59%), Gaps = 20/508 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 23 ISLATPKDTDCTLTQKLIETLKPFGVFEEEEELQHRILILGKLNNLVKEWIREISELKNL 82
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L++ V
Sbjct: 83 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFSSFYEKLKQQEEV 140
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 141 KDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 200
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 201 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 260
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 261 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 320
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI GK W LF+ +FF +K+Y+ + +A
Sbjct: 321 NSTYNVSVSTRAVMVEEFKQGLAITDEILLGKAEWSKLFDAPNFFQKYKHYILLLASAPT 380
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F SEN+ K + + +GL
Sbjct: 381 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPSENTEKEEFRTMWVIGLV 439
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + ++ M+I H++ + + P
Sbjct: 440 FKKM---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFENEMKIAAMHVKRKQLHQL-LP 495
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS 503
V P +KK+ +E ++ L S
Sbjct: 496 SHVLP-----KKKKHSVEGVKLVSLNDS 518
>gi|388454164|ref|NP_001252826.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809034|gb|AFE76392.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809036|gb|AFE76393.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411427|gb|AFH28927.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411429|gb|AFH28928.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944936|gb|AFI36073.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944940|gb|AFI36075.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 745
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 226/578 (39%), Positives = 318/578 (55%), Gaps = 31/578 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D I T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 443 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
P L +KK+ E ++ T L S + S S + + S
Sbjct: 498 ----PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT-----------SAT 542
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQ 573
P SS SS S P A S+ SV Q
Sbjct: 543 KTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQ 580
>gi|403173934|ref|XP_003332965.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170759|gb|EFP88546.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 671
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 206/527 (39%), Positives = 293/527 (55%), Gaps = 42/527 (7%)
Query: 17 TKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKL 76
T L + L +F S EE+ R VLGRLD +VK ++ V++ G+S E +++ K+
Sbjct: 35 TVSLMEELKRRNIFESPEEARAREIVLGRLDVLVKQFVINVSISLGMS-EAVARDSGGKI 93
Query: 77 FTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPV 136
FTFGSYRLGV GP DID LCV P + TR + FF L ML + P V +L VP+A VP+
Sbjct: 94 FTFGSYRLGVHGPGADIDTLCVVPRHITR-EHFFEVLPAMLNDRPEVTELATVPEAFVPI 152
Query: 137 IKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPN 196
IK KF+ + VDLL+A+L IP+ L+ + D+LL NLD++ V SL G RVTD IL LVP+
Sbjct: 153 IKLKFSSIEVDLLFARLALPSIPDSLELIDDALLKNLDDRCVRSLGGSRVTDEILRLVPD 212
Query: 197 IRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIF 256
+ FR +LR ++ WAK R +YSN MGF GG+ WA+ VARVCQLYPN +V+RFF +
Sbjct: 213 VTVFRDSLRAIKLWAKSRAVYSNVMGFCGGVAWAMCVARVCQLYPNKPAGTIVNRFFAVL 272
Query: 257 AHWKWPNPVMLCPI--QYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTL 314
+ W WP+PV+L PI +W+P+ +DR H MPIITP+YPC S++N++ +T
Sbjct: 273 SQWNWPSPVLLKPIGPGPPGDQRRIWNPKIYPQDRGHRMPIITPAYPCMCSTHNITKSTA 332
Query: 315 RIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWV 374
+IM EF+R + +EI G + W LF+ + FF ++ YLQI ++ NA +W G V
Sbjct: 333 QIMMTEFKRGLAVTDEIATGTKPWAALFDKHDFFTRYRYYLQITASSPNAEIQLKWAGTV 392
Query: 375 ESRLRQLIHMIER-----------------------DMGGVLQCRLYPGDFSENSV---- 407
E+RLRQL+ +E D +Q P D ++
Sbjct: 393 EARLRQLVMKVEEVETVDLAHPFIKGFERESYYLTSDEVRAIQVGDVPPDVKGRTLADIE 452
Query: 408 -KSSSQCHY----FMGLGRKQGVSPQDG-EKFDMRLTVEEFKSHVVWMYSSWKQGMQIHV 461
K S Y F+GL + + G K D+ V EF V + M I V
Sbjct: 453 GKEGSGAVYTSSFFIGLLVQPKPAGHTGPRKLDISYPVGEFTRMVKQWEGYAEDSMGIIV 512
Query: 462 SHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKSESSTA 508
+++ +PD+VF G RP S+ K + TK K++ +T+
Sbjct: 513 RYIKGAQLPDYVFDGEQRPSASVPSSK-----AFKRTKTGKAKQATS 554
>gi|380809032|gb|AFE76391.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383415357|gb|AFH30892.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944938|gb|AFI36074.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 724
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 226/578 (39%), Positives = 318/578 (55%), Gaps = 31/578 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D I T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 443 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
P L +KK+ E ++ T L S + S S + + S
Sbjct: 498 ----PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT-----------SAT 542
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQ 573
P SS SS S P A S+ SV Q
Sbjct: 543 KTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQ 580
>gi|194379500|dbj|BAG63716.1| unnamed protein product [Homo sapiens]
Length = 761
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 225/578 (38%), Positives = 318/578 (55%), Gaps = 31/578 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 42 ISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 101
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 102 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 159
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 160 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 219
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 220 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 279
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 280 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 339
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 340 NSTYNVSVSTRMVMVEEFKQGPAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 399
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 400 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 458
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 459 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 513
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
P L +KK+ E ++ T L S + S S + + S
Sbjct: 514 ----PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT-----------SAT 558
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQ 573
P SS SS S P A S+ SV Q
Sbjct: 559 KTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQ 596
>gi|299748265|ref|XP_001837569.2| polymerase [Coprinopsis cinerea okayama7#130]
gi|298407893|gb|EAU84193.2| polymerase [Coprinopsis cinerea okayama7#130]
Length = 595
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 214/546 (39%), Positives = 307/546 (56%), Gaps = 45/546 (8%)
Query: 18 KELEKILVDE----KLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEAN 73
KE+ L++E F SEEE+ R VLGR+ +VK ++ ++++ +G+S E Q A
Sbjct: 28 KEVTVTLMEELRRQNTFESEEEARTREIVLGRVAALVKKFVYKISIARGLS-ESAAQAAG 86
Query: 74 AKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDAR 133
K+FTFGSYRLGV GP +DID LCV P + TR +DFF ML+E V +++ VP+A
Sbjct: 87 GKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTR-EDFFDTFEPMLKEMEGVTEVSGVPEAY 145
Query: 134 VPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSL 193
VP+IK + +G+ +D L A+L + IP+DL D+LL NLDE+ V SL G R + IL L
Sbjct: 146 VPIIKTEIDGIPLDFLMARLNLASIPDDLSLQDDNLLRNLDERCVRSLGGSRQVNEILRL 205
Query: 194 VPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFF 253
VPN+ FR LRC++ WA+RR IYSN GFLGG+ WALLVAR+CQLYPNAL +VSRFF
Sbjct: 206 VPNVDVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWALLVARICQLYPNALAGAIVSRFF 265
Query: 254 KIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTT 313
I W WP PV+L I+ + VW+P+ DR H MPIITP+YP S++NV+++T
Sbjct: 266 IIMYQWSWPQPVLLKQIEDGPLQVRVWNPKLYPADRAHRMPIITPAYPSMCSTHNVTAST 325
Query: 314 LRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFR-QWKG 372
IM EEF+R ++ + + G W LF + FF ++ YLQI IA+ D + +W G
Sbjct: 326 QMIMTEEFKRGADIVDRVIVGTAQWSELFAKHDFFHKYRYYLQI-IASTGDPDLQNKWSG 384
Query: 373 WVESRLRQLIHMIE------------RDMGGVLQC-------RLYPGDFSENSV------ 407
VESR+RQL+ +E + V C + G+ SE
Sbjct: 385 TVESRIRQLVMKLEYVESLILAHPFIKGFDQVSYCLNEDEVKAVVQGEISEAIASRKKED 444
Query: 408 ---KSSSQCHY----FMGLGRKQGVSPQDG-EKFDMRLTVEEFKSHVVWMYSSWKQG-MQ 458
K SQ Y ++GL + + G + D+ ++F S +V M+ + + M
Sbjct: 445 IEGKEGSQTVYTTTFYIGLAIQPKPAGAVGPRRLDISYPTQDF-SKLVKMWDKYDESKMG 503
Query: 459 IHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQ 518
I V H++ +PD VF G RP K ++ + + I S + K + S+ S
Sbjct: 504 IIVRHIKSSALPDNVFDPGERPAKVTQKRVKGKSSNISSEQPNKRQRSST--SVADTIRP 561
Query: 519 TESGVA 524
TE+G +
Sbjct: 562 TENGTS 567
>gi|327259110|ref|XP_003214381.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Anolis carolinensis]
Length = 771
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 222/556 (39%), Positives = 317/556 (57%), Gaps = 22/556 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D I T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 57 ISLAAPKENDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISEIKNL 116
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 117 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYEKLKLQEEV 174
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 175 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 234
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 235 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 294
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 295 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 354
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 355 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 414
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 415 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 473
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWK---QGMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 474 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHVKRRQLHQLL-- 528
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
P L +KK+ E + T L ++SS S+ S + + L S
Sbjct: 529 ----PSHVLQKKKKHSTEGVRLTAL--NDSSLDLSMDSDNSTSVPSPTSAMKTSPLNSSG 582
Query: 536 SVEPSTSSVSSSTSAS 551
S + TS + T+AS
Sbjct: 583 SSQGRTSPAPAVTAAS 598
>gi|32490557|ref|NP_116021.2| poly(A) polymerase alpha isoform 1 [Homo sapiens]
gi|332843097|ref|XP_003314562.1| PREDICTED: poly(A) polymerase alpha [Pan troglodytes]
gi|426377955|ref|XP_004055715.1| PREDICTED: poly(A) polymerase alpha [Gorilla gorilla gorilla]
gi|59803092|sp|P51003.4|PAPOA_HUMAN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|23271194|gb|AAH36014.1| Poly(A) polymerase alpha [Homo sapiens]
gi|119602048|gb|EAW81642.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|119602050|gb|EAW81644.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|306921445|dbj|BAJ17802.1| poly(A) polymerase alpha [synthetic construct]
gi|410307962|gb|JAA32581.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351881|gb|JAA42544.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351883|gb|JAA42545.1| poly(A) polymerase alpha [Pan troglodytes]
Length = 745
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 225/578 (38%), Positives = 318/578 (55%), Gaps = 31/578 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 443 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
P L +KK+ E ++ T L S + S S + + S
Sbjct: 498 ----PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT-----------SAT 542
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQ 573
P SS SS S P A S+ SV Q
Sbjct: 543 KTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQ 580
>gi|390469486|ref|XP_002754311.2| PREDICTED: poly(A) polymerase alpha isoform 1 [Callithrix jacchus]
Length = 745
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 211/508 (41%), Positives = 299/508 (58%), Gaps = 20/508 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D I T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 443 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS 503
P L +KK+ E ++ T L S
Sbjct: 498 ----PNHVLQKKKKHSTEGVKLTALNDS 521
>gi|426248569|ref|XP_004018035.1| PREDICTED: poly(A) polymerase alpha [Ovis aries]
Length = 739
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 218/557 (39%), Positives = 318/557 (57%), Gaps = 26/557 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 443 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS------ESSTAGHSSGQKSSQTESGVALDGSH 529
P L +KK+ E ++ T L S +S + S+ S + GS
Sbjct: 498 ----PSHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSS 553
Query: 530 GLKSGPSVEPSTSSVSS 546
++ P+ + +SV++
Sbjct: 554 QGRNSPAPAVTAASVTN 570
>gi|395827780|ref|XP_003787073.1| PREDICTED: poly(A) polymerase alpha [Otolemur garnettii]
Length = 740
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 222/567 (39%), Positives = 322/567 (56%), Gaps = 27/567 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D I T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 443 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS------ESSTAGHSSGQKSSQTESGVALDGSH 529
P L +KK+ E + T L S +S + S+ S + GS
Sbjct: 498 ----PNHVLQKKKKHSTEGVRLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSS 553
Query: 530 GLKSGPSVEPSTSSVSSSTSAS-SRPQ 555
++ P+ + +SV+++ + S PQ
Sbjct: 554 QGRNSPAPAVTAASVTNTQATEVSVPQ 580
>gi|440899282|gb|ELR50609.1| Poly(A) polymerase alpha, partial [Bos grunniens mutus]
Length = 736
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 218/557 (39%), Positives = 318/557 (57%), Gaps = 26/557 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 23 ISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 82
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 83 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 140
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 141 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 200
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 201 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 260
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 261 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 320
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 321 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 380
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 381 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 439
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 440 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 494
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS------ESSTAGHSSGQKSSQTESGVALDGSH 529
P L +KK+ E ++ T L S +S + S+ S + GS
Sbjct: 495 ----PSHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSS 550
Query: 530 GLKSGPSVEPSTSSVSS 546
++ P+ + +SV++
Sbjct: 551 QGRNSPAPAVTAASVTN 567
>gi|28603760|ref|NP_788820.1| poly(A) polymerase alpha [Bos taurus]
gi|464345|sp|P25500.3|PAPOA_BOVIN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|605|emb|CAA43782.1| polynucleotide adenylyltransferase [Bos taurus]
gi|296475173|tpg|DAA17288.1| TPA: poly(A) polymerase alpha [Bos taurus]
Length = 739
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 218/557 (39%), Positives = 318/557 (57%), Gaps = 26/557 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 443 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS------ESSTAGHSSGQKSSQTESGVALDGSH 529
P L +KK+ E ++ T L S +S + S+ S + GS
Sbjct: 498 ----PSHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSS 553
Query: 530 GLKSGPSVEPSTSSVSS 546
++ P+ + +SV++
Sbjct: 554 QGRNSPAPAVTAASVTN 570
>gi|119602055|gb|EAW81649.1| poly(A) polymerase alpha, isoform CRA_f [Homo sapiens]
Length = 744
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 210/508 (41%), Positives = 299/508 (58%), Gaps = 20/508 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 443 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS 503
P L +KK+ E ++ T L S
Sbjct: 498 ----PNHVLQKKKKHSTEGVKLTALNDS 521
>gi|28207949|emb|CAD62628.1| unnamed protein product [Homo sapiens]
Length = 752
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 210/508 (41%), Positives = 299/508 (58%), Gaps = 20/508 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 53 ISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 112
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 113 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 170
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 171 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 230
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 231 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 290
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 291 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 350
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 351 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 410
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 411 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 469
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 470 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 524
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS 503
P L +KK+ E ++ T L S
Sbjct: 525 ----PNHVLQKKKKHSTEGVKLTALNDS 548
>gi|432104377|gb|ELK31030.1| Poly(A) polymerase alpha [Myotis davidii]
Length = 844
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 218/561 (38%), Positives = 321/561 (57%), Gaps = 26/561 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 124 ISLAAPKETDCLLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 183
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 184 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 241
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 242 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 301
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 302 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 361
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 362 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 421
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 422 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPT 481
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 482 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 540
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + + +
Sbjct: 541 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHELL-- 595
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS------ESSTAGHSSGQKSSQTESGVALDGSH 529
P L +KK+ E + T L ++ +S + S+ S + GS
Sbjct: 596 ----PNHVLQKKKKHSTEGVRLTPLNENSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSS 651
Query: 530 GLKSGPSVEPSTSSVSSSTSA 550
++ P+ + +SV++ +A
Sbjct: 652 QGRNSPAPAVTAASVTNVQAA 672
>gi|443899034|dbj|GAC76367.1| poly(a) polymerase and related nucleotidyltransferases [Pseudozyma
antarctica T-34]
Length = 672
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 203/531 (38%), Positives = 292/531 (54%), Gaps = 64/531 (12%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
I+T+ PT ++ T+ L L +++F S+EES R +LG+LD +VKD++ RV++ G+
Sbjct: 26 IATNGPTPREIEVTRTLVAELERQRVFESDEESKVREVILGKLDAMVKDFVYRVSIAHGM 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E + A K+FTFGSYRLGV GP +DID LCV P + R +DFF ML+E V
Sbjct: 86 S-ESLARAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVQR-EDFFSVFEGMLKEREEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
++ VP A VP+I KF GV +D +A+L + ++L D+LL +LDE+ V SL G
Sbjct: 144 TEVAGVPTAHVPLIASKFMGVDIDFTFARLALPRVEDNLSLEDDNLLRSLDERDVRSLGG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVPNI FR LRC++ WA+RR IYSN MGFLGG+ WA+L AR+CQLYPN
Sbjct: 204 SRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWAMLTARICQLYPNE 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+VSRFF IF WKWP PV+L I+ + VW+P+ DR H MPIITP+YP
Sbjct: 264 AAGAIVSRFFIIFYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMPIITPAYPGM 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++NVS +T +M EF+RA E+ + + GK W LF + F+ +K YLQ+ IA+
Sbjct: 324 CATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTDWSELFAKHDFYFKYKYYLQV-IASSG 382
Query: 364 AGDFR-QWKGWVESRLRQLIHMIE------------RDMGGVLQCR-------LYPGDFS 403
+ D + +W G VES++RQL+ +E + V +C + GD
Sbjct: 383 SADLQLKWHGTVESKIRQLVMKLELVPTITCAHPFIKGFDQVSECHNDNEVRLVATGDIP 442
Query: 404 ENSVKSSSQCH---------------------------------YFMGLGRKQGVSPQDG 430
+ + + + +++GL + ++ +
Sbjct: 443 DEVAQRTQKVDALPETEEAKQAAEAEAAKATEGKEGHRMIYTTTFYIGLSIEPKLAGEGH 502
Query: 431 EKFDMRLTVEEFKSHVVWMYSSWKQ----GMQIHVSHLRCQDIPDFVFPGG 477
K D+ EF S V W+Q M I V H++ +P +VF GG
Sbjct: 503 RKLDISYPTAEFTSKV----KQWEQYDEASMGIVVRHIKWTQLPAYVFEGG 549
>gi|345804115|ref|XP_537551.3| PREDICTED: poly(A) polymerase alpha [Canis lupus familiaris]
Length = 832
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 221/566 (39%), Positives = 322/566 (56%), Gaps = 21/566 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 119 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 178
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 179 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 236
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 237 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 296
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 297 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 356
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 357 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 416
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 417 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 476
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 477 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 535
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 536 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 590
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
P L +KK+ E + T L S + S S + + A+ S SG
Sbjct: 591 ----PNHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPTS-AMKTSPLNSSGS 645
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSI 561
S ++ + + + ++ + PQ VS+
Sbjct: 646 SQGRNSPAPAVTAASVTNPQATEVSV 671
>gi|74354794|gb|AAI02482.1| PAPOLA protein [Bos taurus]
Length = 693
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 218/557 (39%), Positives = 318/557 (57%), Gaps = 26/557 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 443 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS------ESSTAGHSSGQKSSQTESGVALDGSH 529
P L +KK+ E ++ T L S +S + S+ S + GS
Sbjct: 498 ----PSHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSS 553
Query: 530 GLKSGPSVEPSTSSVSS 546
++ P+ + +SV++
Sbjct: 554 QGRNSPAPAVTAASVTN 570
>gi|26335223|dbj|BAC31312.1| unnamed protein product [Mus musculus]
gi|74224037|dbj|BAE23879.1| unnamed protein product [Mus musculus]
Length = 429
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 180/385 (46%), Positives = 249/385 (64%), Gaps = 2/385 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI ++ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDISESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 263 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 323 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 382
Query: 364 AGDFRQWKGWVESRLRQLIHMIERD 388
+ +W G VES++R L+ +ER+
Sbjct: 383 EENHLEWVGLVESKIRVLVGNLERN 407
>gi|402862797|ref|XP_003895729.1| PREDICTED: poly(A) polymerase beta [Papio anubis]
Length = 637
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 215/551 (39%), Positives = 316/551 (57%), Gaps = 16/551 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D + T+ L + L +F EEE R+ VL +L+ +VK+WI+ ++ K +
Sbjct: 27 ISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREISESKSL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 87 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYVKLKLQEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 265 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 325 NSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPT 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN + + +GL
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWVIGLV 443
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ P++ E + LT ++ F V + ++ GM+I HLR +++ + P
Sbjct: 444 LKK---PENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKELHQ-LLP 499
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
V K + + +R+ + + S S +S ++G + S G ++ P
Sbjct: 500 HHVLQDKKAHATEGRRLTDLNDSSFDLSAGCENSMSVPSSTSTMKTGPLISSSQG-RNSP 558
Query: 536 SVEPSTSSVSS 546
++ T+S+++
Sbjct: 559 ALAVMTASMAN 569
>gi|149737664|ref|XP_001489128.1| PREDICTED: poly(A) polymerase alpha-like [Equus caballus]
Length = 755
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 225/579 (38%), Positives = 317/579 (54%), Gaps = 31/579 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 42 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 101
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 102 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 159
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 160 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 219
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 220 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 279
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 280 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 339
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 340 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 399
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 400 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 458
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 459 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 513
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
P L +KK+ E + T L S + S S + + S
Sbjct: 514 ----PNHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPT-----------SAM 558
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQA 574
P SS SS S P A S+ SV Q
Sbjct: 559 KTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQV 597
>gi|301783837|ref|XP_002927334.1| PREDICTED: poly(A) polymerase alpha-like [Ailuropoda melanoleuca]
Length = 739
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 218/557 (39%), Positives = 317/557 (56%), Gaps = 26/557 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 443 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS------ESSTAGHSSGQKSSQTESGVALDGSH 529
P L +KK+ E + T L S +S + S+ S + GS
Sbjct: 498 ----PNHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSS 553
Query: 530 GLKSGPSVEPSTSSVSS 546
++ P+ + +SV++
Sbjct: 554 QGRNSPAPAVTAASVTN 570
>gi|397526096|ref|XP_003832975.1| PREDICTED: poly(A) polymerase alpha, partial [Pan paniscus]
Length = 804
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 225/578 (38%), Positives = 318/578 (55%), Gaps = 31/578 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 85 ISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 144
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 145 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 202
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 203 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 262
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 263 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 322
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 323 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 382
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 383 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 442
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 443 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 501
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 502 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 556
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
P L +KK+ E ++ T L S + S S + + S
Sbjct: 557 ----PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT-----------SAT 601
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQ 573
P SS SS S P A S+ SV Q
Sbjct: 602 KTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQ 639
>gi|281345200|gb|EFB20784.1| hypothetical protein PANDA_017098 [Ailuropoda melanoleuca]
Length = 736
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 218/557 (39%), Positives = 317/557 (56%), Gaps = 26/557 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 23 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 82
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 83 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 140
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 141 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 200
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 201 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 260
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 261 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 320
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 321 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 380
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 381 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 439
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 440 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 494
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS------ESSTAGHSSGQKSSQTESGVALDGSH 529
P L +KK+ E + T L S +S + S+ S + GS
Sbjct: 495 ----PNHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSS 550
Query: 530 GLKSGPSVEPSTSSVSS 546
++ P+ + +SV++
Sbjct: 551 QGRNSPAPAVTAASVTN 567
>gi|431839265|gb|ELK01192.1| Poly(A) polymerase alpha, partial [Pteropus alecto]
Length = 746
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 218/557 (39%), Positives = 318/557 (57%), Gaps = 26/557 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 33 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 92
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 93 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 150
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 151 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 210
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 211 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 270
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 271 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 330
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 331 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPT 390
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 391 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 449
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + + +
Sbjct: 450 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHELL-- 504
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS------ESSTAGHSSGQKSSQTESGVALDGSH 529
P L +KK+ E + T L S +S + S+ S + GS
Sbjct: 505 ----PNHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSS 560
Query: 530 GLKSGPSVEPSTSSVSS 546
++ P+ + +SV++
Sbjct: 561 QGRNSPAPAVTAASVTN 577
>gi|332257779|ref|XP_003277982.1| PREDICTED: poly(A) polymerase beta [Nomascus leucogenys]
Length = 637
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 217/551 (39%), Positives = 314/551 (56%), Gaps = 16/551 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D + T+ L + L +F EEE R+ VL +L+ +VK+WI+ ++ K +
Sbjct: 27 ISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREISESKSL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 87 P-QSVIDNVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYAKLKLQEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAK IYSN + FLGG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILCFLGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 265 VASTLVRKFFLVFSEWEWPNPVLLKEPEQRNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 325 NSTYNVSISTRMVMIEEFKQGLAITHEILLRKAEWSKLFEAPSFFQKYKHYIVLLASATT 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN+ + + +GL
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENTDMEKFRTMWVIGLV 443
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ P++ E + LT ++ F V + K GM+I HLR +++ + P
Sbjct: 444 LKK---PENSEILSIDLTYDIQSFTDTVYRQAVNSKMFEVGMKITAMHLRRKELHQ-LLP 499
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
V K + + +R+ + T S S +S ++G + S G ++ P
Sbjct: 500 HHVLQDKKAHSTEGRRLTDLNDTSFDLSAGCENSMSVPSSTSAVKTGPLISSSQG-RNSP 558
Query: 536 SVEPSTSSVSS 546
++ T+SV++
Sbjct: 559 ALAVMTASVAN 569
>gi|228152|prf||1717389A poly(A) polymerase
Length = 689
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 218/557 (39%), Positives = 317/557 (56%), Gaps = 26/557 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ + K +
Sbjct: 26 ISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIRESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 443 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS------ESSTAGHSSGQKSSQTESGVALDGSH 529
P L +KK+ E ++ T L S +S + S+ S + GS
Sbjct: 498 ----PSHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSS 553
Query: 530 GLKSGPSVEPSTSSVSS 546
++ P+ + +SV++
Sbjct: 554 QGRNSPAPAVTAASVTN 570
>gi|395504561|ref|XP_003756616.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
Length = 739
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 217/557 (38%), Positives = 317/557 (56%), Gaps = 27/557 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS AP D I T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLVAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYEKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + ++ M+I H++ + + +
Sbjct: 443 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHVKRRQLHQLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS------ESSTAGHSSGQKSSQTESGVALDGSH 529
P + +KK+K + T L S +S + S+ S + GS
Sbjct: 498 -----PNHVLQKKKKHSSEVRLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSS 552
Query: 530 GLKSGPSVEPSTSSVSS 546
++ P+ + +SV++
Sbjct: 553 QGRNSPAPAVTAASVTN 569
>gi|643|emb|CAA45031.1| poly(A) polymerase [Bos taurus]
Length = 689
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 218/557 (39%), Positives = 317/557 (56%), Gaps = 26/557 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ + K +
Sbjct: 26 ISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIRESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 443 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS------ESSTAGHSSGQKSSQTESGVALDGSH 529
P L +KK+ E ++ T L S +S + S+ S + GS
Sbjct: 498 ----PSHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSS 553
Query: 530 GLKSGPSVEPSTSSVSS 546
++ P+ + +SV++
Sbjct: 554 QGRNSPAPAVTAASVTN 570
>gi|410962897|ref|XP_003988005.1| PREDICTED: poly(A) polymerase alpha [Felis catus]
Length = 739
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 218/557 (39%), Positives = 317/557 (56%), Gaps = 26/557 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 443 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS------ESSTAGHSSGQKSSQTESGVALDGSH 529
P L +KK+ E + T L S +S + S+ S + GS
Sbjct: 498 ----PNHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSS 553
Query: 530 GLKSGPSVEPSTSSVSS 546
++ P+ + +SV++
Sbjct: 554 QGRNSPAPAVTAASVTN 570
>gi|156082541|ref|XP_001608755.1| poly(A) polymerase PAP [Babesia bovis T2Bo]
gi|154796004|gb|EDO05187.1| poly(A) polymerase PAP, putative [Babesia bovis]
Length = 512
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 191/488 (39%), Positives = 288/488 (59%), Gaps = 20/488 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK-G 62
+ST P+ D T EL K LV + LF +E+ R VL L+ +++ ++++ + + G
Sbjct: 19 VSTDGPSESDREDTAELMKFLVAQNLFETEDGKRKRERVLESLNRVLQQFVRKNAIKQLG 78
Query: 63 ISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL 122
I D+E + +AKL TFGSYRLG+ P++DID LC+ P TR + FF + L+ P
Sbjct: 79 IPDDEA-SKISAKLLTFGSYRLGIVAPNSDIDCLCLCPQSVTR-ESFFTDFYNALKLLPN 136
Query: 123 VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLN 182
+ L VPDA PVIK ++G+ +DLL+A L +PE++D L D++L N++E T S+N
Sbjct: 137 ITKLHAVPDAYTPVIKLIYDGIDIDLLFANLPAQTVPEEIDVLDDAILRNMNEATARSIN 196
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
GCRV IL+ VPN NFR+TLR ++ WA RRG+Y+ M ++GG+ WA+L ARVCQLYPN
Sbjct: 197 GCRVAALILASVPNKDNFRTTLRYVKLWANRRGLYTTVMAYMGGVAWAILTARVCQLYPN 256
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQY-----QAMPHHVWDPRSNQRDRKHLMPIIT 297
LPN L+ +FF+++A W W PVMLC I+ M VWDPR+N DR+HLMP+IT
Sbjct: 257 FLPNQLIQKFFRVYAQWNWKCPVMLCKIKEVPNIPGYMSFKVWDPRNNPTDRQHLMPVIT 316
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAG---KRTWITLFEPYHFFGSFKNY 354
P++P NS++N++ TT RI+ +EF+RA +L + G K W + E F S K++
Sbjct: 317 PAFPSMNSTHNITLTTKRILTDEFKRANDLLKVNAKGAQMKNIWERVLEKEDMFASHKHF 376
Query: 355 LQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCH 414
L I + A +W+GW+ SR+R LI IE + +L R +P F +
Sbjct: 377 LVIEVLATTEHVHGKWEGWIGSRMRFLIKKIE-TVPNIL-VRPWPEFFKYEHKEWDYASC 434
Query: 415 YFMGL-----GRKQGVSPQDGEKFDMRLTVEEFKSHV-VWM-YSSWKQGMQIHVSHLRCQ 467
F G K + + FDMR++++ FK + W ++K + +++ +L+
Sbjct: 435 VFFGFKCKEPDNKTNSAEPANKTFDMRMSIKGFKEIINSWTEMEAYKDQIAVNIRYLKNS 494
Query: 468 DIPDFVFP 475
+P FV P
Sbjct: 495 QLPHFVNP 502
>gi|67972178|dbj|BAE02431.1| unnamed protein product [Macaca fascicularis]
Length = 637
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 215/551 (39%), Positives = 314/551 (56%), Gaps = 16/551 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D + T+ L + L +F EEE R+ VL +L+ +VK+WI+ ++ K +
Sbjct: 27 ISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREISESKSL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 87 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYVKLKLQEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 265 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 325 NSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPT 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN + + +GL
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWVIGLV 443
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ P++ E + LT ++ F V + ++ GM+I HLR +++ + P
Sbjct: 444 LKK---PENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKELHQ-LLP 499
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
V K + +R+ + S S +S ++G + S G ++ P
Sbjct: 500 HHVLQDKKAQATESRRLTDLNDNSFDLSAGCENSMSVPSSTSTMKTGPLISSSQG-RNSP 558
Query: 536 SVEPSTSSVSS 546
++ T+S+++
Sbjct: 559 ALAVMTASMAN 569
>gi|194379056|dbj|BAG58079.1| unnamed protein product [Homo sapiens]
Length = 740
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 225/578 (38%), Positives = 317/578 (54%), Gaps = 31/578 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 42 ISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 101
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 102 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 159
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 160 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 219
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 220 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 279
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 280 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 339
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 340 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 399
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 400 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 458
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 459 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 513
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
P L +KK E ++ T L S + S S + + S
Sbjct: 514 ----PNHVLQKKKTHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT-----------SAT 558
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQ 573
P SS SS S P A S+ SV Q
Sbjct: 559 KTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQ 596
>gi|302564155|ref|NP_001181787.1| poly(A) polymerase beta [Macaca mulatta]
Length = 637
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 215/551 (39%), Positives = 316/551 (57%), Gaps = 16/551 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D + T+ L + L +F EEE R+ VL +L+ +VK+WI+ ++ K +
Sbjct: 27 ISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREISESKSL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 87 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYVKLKLQEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 265 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 325 NSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPT 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN + + +GL
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWVIGLV 443
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ P++ E + LT ++ F V + ++ GM+I HLR +++ + P
Sbjct: 444 LKK---PENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKELHQ-LLP 499
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
V K + + +R+ + + S S +S ++G + S G ++ P
Sbjct: 500 HRVLQDKKAHATEGRRLTDLNDSSFDLSAGCENSMSVPSSTSTMKTGPLISSSQG-RNSP 558
Query: 536 SVEPSTSSVSS 546
++ T+S+++
Sbjct: 559 ALAVMTASMAN 569
>gi|371470953|gb|AEX30810.1| poly(A) polymerase [Bubalus bubalis]
Length = 739
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 209/508 (41%), Positives = 299/508 (58%), Gaps = 20/508 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFQAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 443 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHPLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS 503
P L +KK+ E ++ T + S
Sbjct: 498 ----PSHVLQKKKKHSTEGVKLTPMNDS 521
>gi|148686800|gb|EDL18747.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
gi|148686803|gb|EDL18750.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
Length = 736
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 223/579 (38%), Positives = 321/579 (55%), Gaps = 31/579 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 23 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 82
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 83 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 140
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 141 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 200
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 201 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 260
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 261 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 320
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 321 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 380
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F E+ + + + +GL
Sbjct: 381 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKESPDREEFRTMWVIGLV 439
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 440 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL-- 494
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
P L ++K+ E ++ T L S + S S + + S
Sbjct: 495 ----PSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT-----------SAM 539
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQA 574
P SS SS S P A S+ + + SV QA
Sbjct: 540 KTSPLNSSGSSQGRNSPAPAVTAASVTSIQASEVSVPQA 578
>gi|21914853|ref|NP_035242.1| poly(A) polymerase alpha [Mus musculus]
gi|25090856|sp|Q61183.4|PAPOA_MOUSE RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase
gi|21623967|dbj|BAC00996.1| polyA polymerase [Mus musculus]
gi|162318632|gb|AAI56655.1| Poly (A) polymerase alpha [synthetic construct]
Length = 739
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 223/579 (38%), Positives = 321/579 (55%), Gaps = 31/579 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F E+ + + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKESPDREEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 443 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
P L ++K+ E ++ T L S + S S + + S
Sbjct: 498 ----PSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT-----------SAM 542
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQA 574
P SS SS S P A S+ + + SV QA
Sbjct: 543 KTSPLNSSGSSQGRNSPAPAVTAASVTSIQASEVSVPQA 581
>gi|148686802|gb|EDL18749.1| poly (A) polymerase alpha, isoform CRA_c [Mus musculus]
Length = 729
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 223/579 (38%), Positives = 321/579 (55%), Gaps = 31/579 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 23 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 82
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 83 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 140
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 141 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 200
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 201 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 260
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 261 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 320
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 321 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 380
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F E+ + + + +GL
Sbjct: 381 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKESPDREEFRTMWVIGLV 439
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 440 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL-- 494
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
P L ++K+ E ++ T L S + S S + + S
Sbjct: 495 ----PSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT-----------SAM 539
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQA 574
P SS SS S P A S+ + + SV QA
Sbjct: 540 KTSPLNSSGSSQGRNSPAPAVTAASVTSIQASEVSVPQA 578
>gi|344274222|ref|XP_003408916.1| PREDICTED: poly(A) polymerase alpha-like [Loxodonta africana]
Length = 739
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 219/566 (38%), Positives = 320/566 (56%), Gaps = 21/566 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D + T+ L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLATPKETDCVLTQRLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F +N K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKDNPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 443 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRRQLHQLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
P L +KK+ E + T L S + S S + + A+ S SG
Sbjct: 498 ----PNHVLQKKKKHSAEGVRLTALNDSSLDLSMDSDNSMSVPSPTS-AMKTSPLNSSGS 552
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSI 561
S ++ + + + ++ + Q P VS+
Sbjct: 553 SQGRNSPAPAVTAASVTNTQAPEVSV 578
>gi|126290553|ref|XP_001375249.1| PREDICTED: poly(A) polymerase alpha-like [Monodelphis domestica]
Length = 738
Score = 361 bits (927), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 216/557 (38%), Positives = 317/557 (56%), Gaps = 27/557 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D I ++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCILAQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYEKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + ++ M+I H++ + + +
Sbjct: 443 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHVKRRQLHQLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS------ESSTAGHSSGQKSSQTESGVALDGSH 529
P + +KK+K + T L S +S + S+ S + GS
Sbjct: 498 -----PNHVLQKKKKHSSEVRLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSS 552
Query: 530 GLKSGPSVEPSTSSVSS 546
++ P+ + +SV++
Sbjct: 553 QGRNSPAPAVTAASVTN 569
>gi|291413714|ref|XP_002723110.1| PREDICTED: poly(A) polymerase beta (testis specific)-like
[Oryctolagus cuniculus]
Length = 629
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 221/562 (39%), Positives = 320/562 (56%), Gaps = 24/562 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D T++L + L +F EEE R+ +L +L+ +VK+WI+ ++ + +
Sbjct: 27 ISLAAPKETDCALTQKLIETLRPFGVFEEEEELQSRILILEKLNNLVKEWIREISESRSL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ +LFTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 87 P-EAVVESVGGRLFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLREEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
DL V +A VPVIK F+GV +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 145 RDLRAVEEAFVPVIKLCFDGVEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVP+I NFR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILHLVPDIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 265 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 325 NSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPT 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 443
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMY---SSWKQGMQIHVSHLRCQDIPDFVFP 475
K+ P++ E + LT ++ F V +++ M+I HLR +++ +
Sbjct: 444 LKK---PENSEILSIDLTYDIQSFTDTVYRQAINSKTFEMDMKIDAMHLRRKELHQLL-- 498
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
P + +KK+ E + T + S+SS S + +G+ + GS +S P
Sbjct: 499 -----PNHVLQKKKHPAEGVRLTAV--SDSSLGTDSENSMPVPSPTGL-VTGSCPGRSSP 550
Query: 536 SVEPSTSSVSSSTSASSRPQRP 557
+ + S+ SST S +P
Sbjct: 551 APAVLSVSLGSSTQPSEVASQP 572
>gi|194038370|ref|XP_001929110.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Sus scrofa]
Length = 739
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 217/557 (38%), Positives = 317/557 (56%), Gaps = 26/557 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 443 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS------ESSTAGHSSGQKSSQTESGVALDGSH 529
P L +KK+ + + T L S +S + S+ S + GS
Sbjct: 498 ----PNHVLQKKKKHSTDGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSS 553
Query: 530 GLKSGPSVEPSTSSVSS 546
++ P+ + +SV++
Sbjct: 554 QGRNSPAPAVTAASVTN 570
>gi|119359931|dbj|BAF41975.1| testis-specific poly(A) polymerase [Homo sapiens]
Length = 637
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 214/551 (38%), Positives = 314/551 (56%), Gaps = 16/551 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D + T+ L + L +F EEE R+ VL +L+ +VK+WI+ ++ K +
Sbjct: 27 ISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREISESKSL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 87 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDR-SDFFTSFYAKLKLQEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAK IYSN +GF GG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFHGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV ++F +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 265 VASTLVRKYFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M E F++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 325 NSTYNVSISTRMVMIEVFKQGLAITHEILLTKAVWSKLFEAPSFFQKYKHYIVLLASAST 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN + + +GLG
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWVIGLG 443
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ P + E + LT ++ F V + ++ GM+I HLR +++ + P
Sbjct: 444 LKK---PDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAMHLRRKELHQ-LLP 499
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
V K + + +R+ + + S S +S ++G + S G ++ P
Sbjct: 500 HHVLQDKKAHSTEGRRLTDLNDSSFDLSAGCENSMSVPSSTSTMKTGPLISSSQG-RNSP 558
Query: 536 SVEPSTSSVSS 546
++ T+SV++
Sbjct: 559 ALAVMTASVAN 569
>gi|148233493|ref|NP_001083620.1| poly(A) polymerase alpha-B [Xenopus laevis]
gi|38303906|gb|AAH61931.1| Pap protein [Xenopus laevis]
Length = 731
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 224/581 (38%), Positives = 324/581 (55%), Gaps = 35/581 (6%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D T++L + L +F E+E R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 23 ISLATPKDTDCTLTQKLIETLKPYGVFEEEDELQHRILILGKLNNLVKEWIREISELKNL 82
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L++ V
Sbjct: 83 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFSSFYEKLKQQEEV 140
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 141 KDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 200
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI +FR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 201 CRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 260
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 261 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 320
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LF+ +FF +K+Y+ + +A
Sbjct: 321 NSTYNVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQKYKHYILLLASAPT 380
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F SENS K + + +GL
Sbjct: 381 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPSENSEKEEFRTMWVIGLV 439
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + P
Sbjct: 440 FKKM---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFETEMKIAAMHVKRKQLHQL-LP 495
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
V P +KK+ +E ++ L S + V D S + S
Sbjct: 496 SHVLP-----KKKKHSVEGVKLVSL--------------NDSSIDLSVDSDNSMSVPSPT 536
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQN 576
+ ++ SS S + P P VS+ + AT V QN
Sbjct: 537 NATRTSPLNSSGLSQGNSPATP-VSLSVTNTQATDVMVPQN 576
>gi|343427736|emb|CBQ71262.1| probable PAP1-poly(A) polymerase [Sporisorium reilianum SRZ2]
Length = 658
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 182/384 (47%), Positives = 246/384 (64%), Gaps = 4/384 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
I+T+ PT ++ TK L L + +F S+EES R +LG+LD +VKD++ RV++ G+
Sbjct: 26 IATNGPTPREIEVTKTLVAELEKQGVFESDEESKVREVILGKLDAMVKDFVYRVSIASGM 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E + A K+FTFGSYRLGV GP +DID LCV P + R +DFF ML+E V
Sbjct: 86 S-ESLARAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVQR-EDFFSVFEGMLKEREEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
++ VP A VP+I KF GV +D +A+L + + L D+LL NLDE+ V SL G
Sbjct: 144 TEVAGVPTAHVPLIAAKFMGVDIDFTFARLSLPRVEDSLSLEDDNLLRNLDERDVRSLGG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVPNI FR LRC++ WA+RR IYSN MGFLGG+ WA+L AR+CQLYPN
Sbjct: 204 SRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWAMLTARICQLYPNE 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+VSRFF I WKWP PV+L I+ + VW+P+ DR H MPIITP+YP
Sbjct: 264 AAGAIVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMPIITPAYPGM 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++NVS +T +M EF+RA E+ + + GK W LF + FF +K YLQ+ IA+
Sbjct: 324 CATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTHWSELFAKHDFFFKYKYYLQV-IASSG 382
Query: 364 AGDFR-QWKGWVESRLRQLIHMIE 386
+ D + +W G VES++RQL+ +E
Sbjct: 383 SADLQLKWHGTVESKIRQLVMKLE 406
>gi|395845544|ref|XP_003804110.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase beta [Otolemur
garnettii]
Length = 637
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 218/555 (39%), Positives = 315/555 (56%), Gaps = 25/555 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D T++L + L +F EEE R+ +L +L+ +VK+WI+ ++ K +
Sbjct: 27 ISLAAPKDTDCTLTQKLIETLKPFGVFEEEEELQRRILILEKLNNLVKEWIREISESKSL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 87 P-QAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 265 VASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 325 NSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPT 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPEKEEFRTMWVIGLV 443
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWK---QGMQIHVSHLRCQDIPDFVFP 475
K+ P++ E + LT ++ F V + K M+I HL+ +++ +
Sbjct: 444 LKK---PENSEILSIDLTYDIQSFTDTVYRQAINTKMFEMDMKIAAMHLKRKELHQLL-- 498
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQ----KSSQTESGVALDGSHGL 531
P + +KK+ + E + T L + + S + S+ T L GS
Sbjct: 499 -----PDHVLQKKKTQTEGVRLTALNDNRLDLSVDSENRISVPSSTSTMKIGPLTGSSQG 553
Query: 532 KSGPSVEPSTSSVSS 546
+S P++ SV++
Sbjct: 554 RSSPALTLMAGSVTN 568
>gi|74210049|dbj|BAE21312.1| unnamed protein product [Mus musculus]
Length = 739
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 222/579 (38%), Positives = 320/579 (55%), Gaps = 31/579 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F E+ + + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKESPDREEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 443 LKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
P L ++ + E ++ T L S + S S + + S
Sbjct: 498 ----PSHVLQKRNKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT-----------SAM 542
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQA 574
P SS SS S P A S+ + + SV QA
Sbjct: 543 KTSPLNSSGSSQGRNSPAPAVTAASVTSIQASEVSVPQA 581
>gi|67971414|dbj|BAE02049.1| unnamed protein product [Macaca fascicularis]
Length = 548
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 211/508 (41%), Positives = 298/508 (58%), Gaps = 20/508 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D I T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFGGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 443 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS 503
P L +KK+ E ++ T L S
Sbjct: 498 ----PNHVLQKKKKHSTEGVKLTALNDS 521
>gi|328853642|gb|EGG02779.1| hypothetical protein MELLADRAFT_38417 [Melampsora larici-populina
98AG31]
Length = 529
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 200/505 (39%), Positives = 284/505 (56%), Gaps = 39/505 (7%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT + +ST L L + + F S EE+ R VLGRL+ +VK+++ +V++ G+
Sbjct: 9 ISINGPTRAEELSTTALMDELKERRTFESPEEARARELVLGRLNLLVKEFVIKVSLALGM 68
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD +E K+FTFGSYRLGV GP +DID LCV P TR + FF L +ML+E P V
Sbjct: 69 SDHVA-RETGGKIFTFGSYRLGVHGPGSDIDTLCVVPRQVTR-EHFFEILPQMLKERPEV 126
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L+ VP+A VP+I KF+G+ VDLL+A+L +P+DL+ D+LL NLD++ V SL G
Sbjct: 127 TELSTVPEAFVPIISLKFSGIEVDLLFARLALPSVPDDLELKDDALLKNLDDRCVRSLGG 186
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVP++ FR +LR ++ WAK R +YSN MGF GG+ WA+ ARVCQLYPN
Sbjct: 187 SRVTDEILRLVPDVEVFRHSLRAIKLWAKNRAVYSNVMGFCGGVAWAMCTARVCQLYPNK 246
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAM--PHHVWDPRSNQRDRKHLMPIITPSYP 301
+V+RFF + + W WP+PV+L I + VW+P+ +DR H MPIITP+YP
Sbjct: 247 PAATIVNRFFAVLSQWNWPSPVLLKAIGSGPIGDQRRVWNPKIYPQDRGHRMPIITPAYP 306
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
C S++NV+ +T ++M EF+R + + I G W LFE + FF ++NY+QI ++
Sbjct: 307 CMCSTHNVTKSTAQVMMTEFKRGLAVTDAIATGSAQWSALFEKHDFFTRYRNYIQITASS 366
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIER--------------------------------DM 389
A +W G VESRLR L+ +E DM
Sbjct: 367 PEADAHLKWAGTVESRLRLLVLKVEEIETVDMAHPFIKGFSNTTYALNRQEVSLVQGGDM 426
Query: 390 GGVLQCRLYPGDFSENS-VKSSSQCHYFMG-LGRKQGVSPQDGEKFDMRLTVEEFKSHVV 447
+ R+ P D+ + V+ C +F+G L + V K D+ V EF V
Sbjct: 427 PNEIASRI-PEDYENRADVEVVHTCSFFVGLLVHPKPVGHVGPRKLDITYPVGEFTRMVK 485
Query: 448 WMYSSWKQGMQIHVSHLRCQDIPDF 472
+ M I V H++ P F
Sbjct: 486 QWEGYSEDKMSISVRHIKKSVYPSF 510
>gi|55669561|pdb|1Q79|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 514
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 196/440 (44%), Positives = 273/440 (62%), Gaps = 9/440 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDXLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLXFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRXIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLTVE 440
K+ ++ E + LT +
Sbjct: 443 FKKT---ENSENLSVDLTYD 459
>gi|157820829|ref|NP_001101526.1| poly(A) polymerase alpha [Rattus norvegicus]
gi|149044213|gb|EDL97595.1| poly (A) polymerase alpha (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 739
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 222/579 (38%), Positives = 320/579 (55%), Gaps = 31/579 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F E+ + + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKESPDREEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 443 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL-- 497
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
P L ++K+ E ++ L S + S S + + S
Sbjct: 498 ----PSHVLQKRKKHSTEGVKLAALNDSSLDLSMDSDNSMSVPSPT-----------SAM 542
Query: 536 SVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQA 574
P SS SS S P A S+ + + SV QA
Sbjct: 543 KTSPLNSSGSSQGRNSPAPAVTAASVTSIQASEVSVPQA 581
>gi|312381415|gb|EFR27171.1| hypothetical protein AND_06288 [Anopheles darlingi]
Length = 1653
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 200/536 (37%), Positives = 299/536 (55%), Gaps = 70/536 (13%)
Query: 4 ISTSAPTVLDVISTKELEKIL-----VDEK----------------LFASEEESLGRVEV 42
IST+ P D+ T+ELEK L V E+ +F +E E R+E+
Sbjct: 35 ISTAEPKPEDLQKTQELEKSLGKCGLVREEQYPGLMCQDFPLEPYNVFEAESELNHRMEI 94
Query: 43 LGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCY 102
L +L+ +VK W++ V++ + + E ++ K++TFGSYRLGV DIDALCV P
Sbjct: 95 LAKLNTLVKQWVRDVSISRHMP-EATAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRN 153
Query: 103 ATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDL 162
R D+FG F +L++ P V + V +A VPVIK F+G+ +DLL+A+L IP++
Sbjct: 154 IDR-SDYFGSFFELLKQQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFARLALKEIPDNF 212
Query: 163 DSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRR-------- 214
D D LL NLD+++V SLNGCRVTD IL LVPNI NFR LR ++ WAKR+
Sbjct: 213 DLRDDMLLKNLDQKSVRSLNGCRVTDEILRLVPNIDNFRLALRTIKLWAKRKLLPHGLIS 272
Query: 215 ------------------------GIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVS 250
GIYSN++G+ GG++WA+LVAR CQLYPNA+ LV
Sbjct: 273 PEGMCDERCFNVRVAFCICLVTGHGIYSNSLGYFGGVSWAMLVARTCQLYPNAVAATLVH 332
Query: 251 RFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVS 310
+FF +F+ WKWP PV+L + VWDPR N +DR HLMPIITP+YP NS++NVS
Sbjct: 333 KFFLVFSRWKWPQPVLLKQPDNVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNSTFNVS 392
Query: 311 STTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQW 370
S+T ++M EF R ++ ++I GK+ W LFE FF +++++ + + + NA D +W
Sbjct: 393 SSTRKVMLMEFNRGMQITDDIMMGKQMWDKLFEAPSFFYRYRHFIVLLVTSSNADDHLEW 452
Query: 371 KGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ------- 423
G VES++R LI +ER+ L + P + ++ ++ + G Q
Sbjct: 453 CGLVESKIRYLIQNLERNQHINL-AHVNPKCYEQHEQNPAATLNAGGGADANQTPAAFCS 511
Query: 424 ----GVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFV 473
G+ + E ++ LT ++ F + V ++ K GM+I H+R + + ++
Sbjct: 512 LWFIGLEFERTENLNVDLTESIQSF-TDSVHKHALLKDGMKIEARHVRRKQLASYL 566
>gi|354467761|ref|XP_003496337.1| PREDICTED: poly(A) polymerase beta-like [Cricetulus griseus]
Length = 642
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 215/551 (39%), Positives = 319/551 (57%), Gaps = 16/551 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D T++L + L +F EEE R+ +L +L+ +VK+WI+ ++ + +
Sbjct: 27 ISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIREISESRNL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R +DFF + L+ V
Sbjct: 87 P-QAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-NDFFTSFYDKLKLQEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI +FR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 265 IASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 325 NSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPT 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENVDKEEFRTMWVIGLV 443
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ P++ E + LT ++ F V + ++ M+I HL+ +++ + P
Sbjct: 444 LKK---PENSESLSIDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHLKRKELHQ-LLP 499
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
V K + + R+ + + L S S S+ + ++G L G+ +S P
Sbjct: 500 NHVLQKKETHLTEGVRLTAVNDSSLLLSVDSENSMSAPSPTGLVKTG-PLTGNPQGRSSP 558
Query: 536 SVEPSTSSVSS 546
++ T+SV++
Sbjct: 559 ALAVMTASVTN 569
>gi|393246171|gb|EJD53680.1| polymerase [Auricularia delicata TFB-10046 SS5]
Length = 610
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 220/573 (38%), Positives = 318/573 (55%), Gaps = 53/573 (9%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ P+ + T L + L D+ F SEEE+ R VLGR+ +V+ ++ +V++ +G+
Sbjct: 17 ISTAGPSKREEEVTVTLMQELRDQNRFESEEEARTREIVLGRVSALVRKFVYKVSIARGM 76
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E Q A K+FT+GSYRLGV GP +DID LCV P + R +DFF ML+E V
Sbjct: 77 S-ETAAQAAGGKIFTYGSYRLGVHGPGSDIDTLCVVPKHVNR-EDFFDVFEPMLRELEGV 134
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+++ VP+A VP+IK K + + +DL++A++ S + +DLD D++L NLDE+ V SL G
Sbjct: 135 AEVSGVPEAYVPIIKTKISDIPLDLVFARVALSSVNDDLDLSDDNILRNLDERCVRSLGG 194
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
R+TD IL LVPN FR LRC++ WA+RR IYSN GFLGG+ WA+LVAR+CQLYPNA
Sbjct: 195 SRMTDEILRLVPNQAVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQLYPNA 254
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
V+VSRFF I WKWPNPV+L I+ + VW+P+ DR H MPIITP+YP
Sbjct: 255 NAGVIVSRFFIIMREWKWPNPVLLKQIEEGPLQVRVWNPKLYPSDRAHRMPIITPNYPSM 314
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
S++NVS +T I++ E +RA E+ + I G TW LF + FF ++ YLQ+ + +N
Sbjct: 315 CSTHNVSQSTQMIIKHELRRASEIVDRIIMGSATWSELFAKHDFFHKYRYYLQVIASTEN 374
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL------------------QCRLYPGDFSEN 405
A +W G VESRLRQL+ +E VL + R F +
Sbjct: 375 ADLQLKWAGTVESRLRQLVMKLEYVDSLVLAHPFIKGFDQTHYLLTEEEVRFVAQGFVSD 434
Query: 406 SV----------KSSSQCHY----FMGLG----RKQGVSPQDGEKFDMRLTVEEFKSHVV 447
+ K +Q Y ++GL + V P+ K D+ EF + +V
Sbjct: 435 VISKRTKEDIEGKDGAQIVYTTTFYIGLAIEPKQPGAVGPR---KLDISYPTAEF-TKLV 490
Query: 448 WMYSSWKQG-MQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKSESS 506
M+ ++ M I V H++ +PD+VF R PK + ++ TK KS S+
Sbjct: 491 KMWENFDDSKMGIVVRHIKSTMLPDYVFDPSERQPK----------QQLKRTKSSKSTSN 540
Query: 507 TAGHSSGQKSSQTESGVALDGSHGLKSGPSVEP 539
A S + + S + + + +S S P
Sbjct: 541 NADASPDMPNKKRRSSLNMSETPRSESALSALP 573
>gi|417412482|gb|JAA52623.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 725
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 207/508 (40%), Positives = 299/508 (58%), Gaps = 20/508 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T+ L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 39 ISLAAPKETDCLLTQRLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 98
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 99 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 156
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 157 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 216
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 217 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 276
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 277 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 336
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 337 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPT 396
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F E+ K + + +GL
Sbjct: 397 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKESPDKEEFRTMWVIGLV 455
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + + +
Sbjct: 456 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHELL-- 510
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS 503
P L ++K+ E + T L ++
Sbjct: 511 ----PNHVLQKRKKHSAEGVRLTPLNEN 534
>gi|388578995|gb|EIM19325.1| Poly(A) polymerase, partial [Wallemia sebi CBS 633.66]
Length = 557
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 199/523 (38%), Positives = 294/523 (56%), Gaps = 51/523 (9%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS ++PT L+ L + L D+ SE+ESL R +VL + +VK+++KRV++ G+
Sbjct: 6 ISLASPTDLEKQVDAGLIQELKDQNTIESEQESLNREKVLALVQSLVKEFVKRVSIRNGM 65
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E +A K+FTFGSYRLGV P DID LCV P + +R +DFF +L+ V
Sbjct: 66 S-ESLADQAGGKIFTFGSYRLGVNQPGADIDTLCVVPKHVSR-EDFFDVFEPLLKTREEV 123
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLN- 182
VPDA VP+IK +G+ +D L A+L + IP+DL+ D+LL NLDE+ V SLN
Sbjct: 124 SVCAGVPDAYVPIIKTTISGIEIDFLVARLALATIPDDLELADDNLLKNLDERCVRSLND 183
Query: 183 ------GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARV 236
G RVTD IL +VPN++ FR +LRC++ WA+RR IYSN GFLGG+ WA+LVAR+
Sbjct: 184 NLTIIIGSRVTDEILRVVPNVQVFRESLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARI 243
Query: 237 CQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPII 296
CQLYPN ++++FF I WKWP+PV+L I+ + VW+P+ DR H MPII
Sbjct: 244 CQLYPNENAGAVIAKFFTILYQWKWPHPVLLKEIEDGPLKVRVWNPKIYPSDRAHRMPII 303
Query: 297 TPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQ 356
TP+YP S++NV +T +M++EF+R ++ + I G TW LF + FF +K+YLQ
Sbjct: 304 TPAYPSMCSTHNVGPSTQEVMRQEFKRGMDILDGIHKGTTTWSQLFNKHEFFSKYKHYLQ 363
Query: 357 IHIAAKNAGDFRQWKGWVESRLRQLIHMIE------------RDMGGVLQC--------- 395
I + + A ++W G VES++RQL+ +E + V C
Sbjct: 364 IIASGQTAESQKKWSGAVESKVRQLVSKLELVDGIELAHPFVKGFSEVFICLNDEEVQHA 423
Query: 396 ----------------RLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLT- 438
Y +E+ + +++GL Q +P+ EK + LT
Sbjct: 424 AEYNPSEEVKERSKKPEEYENKEAEDGIHRVYISTFYIGLA-IQPRNPETNEKRTLNLTY 482
Query: 439 -VEEFKSHVVWMYSSWKQG-MQIHVSHLRCQDIPDFVFPGGVR 479
EF + ++ + +G M+I V +++ +PD VF GG+R
Sbjct: 483 PTNEFMK-LTKLWDQFVEGEMKIFVKNIKASALPDVVFEGGIR 524
>gi|417412515|gb|JAA52639.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 738
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 207/508 (40%), Positives = 299/508 (58%), Gaps = 20/508 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T+ L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 39 ISLAAPKETDCLLTQRLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 98
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 99 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 156
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 157 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 216
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 217 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 276
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 277 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 336
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 337 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPT 396
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F E+ K + + +GL
Sbjct: 397 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKESPDKEEFRTMWVIGLV 455
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + + +
Sbjct: 456 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHELL-- 510
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS 503
P L ++K+ E + T L ++
Sbjct: 511 ----PNHVLQKRKKHSAEGVRLTPLNEN 534
>gi|115530785|emb|CAL49411.1| poly(A) polymerase alpha (pap) [Xenopus (Silurana) tropicalis]
Length = 474
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 196/440 (44%), Positives = 275/440 (62%), Gaps = 9/440 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 23 ISLATPKDTDCTLTQKLIETLKPFGVFEEEEELQHRILILGKLNNLVKEWIREISELKNL 82
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L++ V
Sbjct: 83 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFSSFYEKLKQQEEV 140
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 141 KDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 200
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 201 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 260
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 261 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 320
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI GK W LF+ +FF +K+Y+ + +A
Sbjct: 321 NSTYNVSVSTRAVMVEEFKQGLAITDEILLGKAEWSKLFDAPNFFQKYKHYILLLASAPT 380
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F SEN+ K + + +GL
Sbjct: 381 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPSENTEKEEFRTMWVIGLV 439
Query: 421 RKQGVSPQDGEKFDMRLTVE 440
K+ ++ E + LT +
Sbjct: 440 FKKM---ENSENLSVDLTYD 456
>gi|392587022|gb|EIW76357.1| Poly(A) polymerase [Coniophora puteana RWD-64-598 SS2]
Length = 629
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 199/511 (38%), Positives = 290/511 (56%), Gaps = 42/511 (8%)
Query: 18 KELEKILVDE----KLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEAN 73
KEL K L++E F + EES R VLGR+ VK ++++V++ +G+S E A
Sbjct: 24 KELTKTLMEELRRQGTFENVEESRTRELVLGRVAAAVKKFVRQVSLSRGLS-ESAATAAG 82
Query: 74 AKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDAR 133
K+FTFGSYRLGV G +DID LCV P + R +DFF +L+E +++ VP+A
Sbjct: 83 GKIFTFGSYRLGVHGAGSDIDTLCVVPKHVLR-EDFFETFEPILREVEGASEVSGVPEAY 141
Query: 134 VPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSL 193
VP+IK K +G+ +D L A+L S IP+DL D+LL NLDE+ + SL G RV D IL L
Sbjct: 142 VPIIKAKISGIPLDFLMARLALSSIPDDLTLQDDNLLRNLDERCIRSLGGSRVNDEILRL 201
Query: 194 VPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFF 253
VPN+ +R +LRC++ WA+RR IYSN GFLGG+ WA+LVAR+CQLYPNA+ +VSRFF
Sbjct: 202 VPNVEVYRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAILVARICQLYPNAVAGAIVSRFF 261
Query: 254 KIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTT 313
I W WP PV+L I+ + VW+P+ DR H MPIITP+YP S++NV+ +T
Sbjct: 262 IIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPGDRSHRMPIITPAYPAMCSTHNVTQST 321
Query: 314 LRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGW 373
I+ EEF++ ++ +++ G TW LF + FF ++ YLQ+ + N +W G
Sbjct: 322 QMIVTEEFKKGADIVDKVIVGSATWADLFRKHDFFHKYRYYLQVIASTDNTETQIKWAGT 381
Query: 374 VESRLRQLIHMIE------------RDMGGVLQC-------RLYPGDFSENSVKSSSQ-- 412
VESRLRQL+ +E + V C + G+ E K ++
Sbjct: 382 VESRLRQLVMKLEYVDSLILAHPFIKGFDQVCHCSTEDEIRSVACGEIPEAVRKRKAEDI 441
Query: 413 -----------CHYFMGLGRKQGVSPQDG-EKFDMRLTVEEFKSHVVWMYSSWKQ-GMQI 459
+++GL + + G K D+ EF + +V M+ + + M I
Sbjct: 442 KNVEGAQTVYSTAFYIGLEIEPKPAGATGPRKLDISYPTTEF-TKLVKMWEKYNETTMGI 500
Query: 460 HVSHLRCQDIPDFVFPGGVRPPKSLNEKKRK 490
+V H++ +PD+VF G R P+ N K+ K
Sbjct: 501 YVRHMKSTSLPDYVFDEGERQPRQ-NRKRPK 530
>gi|55669560|pdb|1Q78|A Chain A, Crystal Structure Of Poly(A) Polymerase In Complex With
3'- Datp And Magnesium Chloride
Length = 514
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 196/440 (44%), Positives = 273/440 (62%), Gaps = 9/440 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDXLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRXIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLTVE 440
K+ ++ E + LT +
Sbjct: 443 FKKT---ENSENLSVDLTYD 459
>gi|296192583|ref|XP_002744135.1| PREDICTED: poly(A) polymerase beta [Callithrix jacchus]
Length = 634
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 216/551 (39%), Positives = 316/551 (57%), Gaps = 16/551 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D + T+ L + L +F EEE R+ VL +L+ +VK+WI+ ++ K +
Sbjct: 24 ISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREISESKSL 83
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ ++ K+FTFGSYRLGV DIDALC+ P + R DFF + L+ V
Sbjct: 84 P-QSILENVGGKIFTFGSYRLGVHTKGADIDALCIAPRHVDR-SDFFTSFYAKLKLQEEV 141
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL +LD +++ SLNG
Sbjct: 142 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKDLDIRSIRSLNG 201
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 202 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHSIYSNILGFLGGVSWAMLVARTCQLYPNA 261
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + Q + VWDPR N DR HLMPIITP+YP
Sbjct: 262 VASTLVRKFFLVFSEWEWPNPVLLKEPEEQNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 321
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 322 NSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPT 381
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 382 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFLAPKENPGKKEFRTMWVIGLV 440
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ P++ E + LT ++ F V + K GM+I HLR +++ + P
Sbjct: 441 LKK---PENSEILSIDLTYDIQSFTDTVYRQAVNSKMFETGMKIAAMHLRRKELHQ-LLP 496
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
V K + + +R+ + S S +S ++G + S G ++ P
Sbjct: 497 HHVLQEKKAHSPEGRRLTDLNDRSFDLSAGGENSISVPSSTSTMKTGPLISSSQG-RNSP 555
Query: 536 SVEPSTSSVSS 546
++ T+SV++
Sbjct: 556 ALAVMTASVTN 566
>gi|351701193|gb|EHB04112.1| Poly(A) polymerase alpha, partial [Heterocephalus glaber]
Length = 736
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 221/566 (39%), Positives = 319/566 (56%), Gaps = 21/566 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 23 ISLAAPKETDWVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 82
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 83 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 140
Query: 124 EDLTPVP-DARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLN 182
+DL +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLN
Sbjct: 141 KDLRVCKWEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLN 200
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
GCRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPN
Sbjct: 201 GCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPN 260
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
A+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 261 AIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 320
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK 362
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 321 QNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 380
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGL 419
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 381 TEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGL 439
Query: 420 GRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFPG 476
K+ + + D+ ++ F V + K M+I H++ + + +
Sbjct: 440 VFKK--TENENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL--- 494
Query: 477 GVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPS 536
P L +KK+ E ++ T L ++SS S S + + L S S
Sbjct: 495 ---PNHVLQKKKKHSTEGVKLTAL--NDSSLDLSMDSDNSMSVPSPTSATKTSPLNSSGS 549
Query: 537 VEPSTSSVSSSTSAS-SRPQRPAVSI 561
+ S + T+AS + Q P VS+
Sbjct: 550 SQGRNSPAPAVTAASVTNIQSPEVSV 575
>gi|417412403|gb|JAA52590.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 709
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 207/508 (40%), Positives = 299/508 (58%), Gaps = 20/508 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T+ L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 39 ISLAAPKETDCLLTQRLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 98
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 99 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 156
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 157 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 216
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 217 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 276
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 277 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 336
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 337 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPT 396
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F E+ K + + +GL
Sbjct: 397 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKESPDKEEFRTMWVIGLV 455
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + + +
Sbjct: 456 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHELL-- 510
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS 503
P L ++K+ E + T L ++
Sbjct: 511 ----PNHVLQKRKKHSAEGVRLTPLNEN 534
>gi|417412397|gb|JAA52587.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 707
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 207/508 (40%), Positives = 299/508 (58%), Gaps = 20/508 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T+ L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 39 ISLAAPKETDCLLTQRLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 98
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 99 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 156
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 157 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 216
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 217 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 276
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 277 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 336
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 337 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPT 396
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F E+ K + + +GL
Sbjct: 397 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKESPDKEEFRTMWVIGLV 455
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ ++ E + LT ++ F V + K M+I H++ + + + +
Sbjct: 456 FKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHELL-- 510
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS 503
P L ++K+ E + T L ++
Sbjct: 511 ----PNHVLQKRKKHSAEGVRLTPLNEN 534
>gi|170593997|ref|XP_001901750.1| Poly polymerase central domain containing protein [Brugia malayi]
gi|158590694|gb|EDP29309.1| Poly polymerase central domain containing protein [Brugia malayi]
Length = 842
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 214/582 (36%), Positives = 322/582 (55%), Gaps = 41/582 (7%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS S P D++ + +L++ L F +EEE R++VL +++ VK W++ V+ + +
Sbjct: 155 ISISGPDEFDIVMSTKLDEYLQANGYFETEEEMNLRLKVLSKINAYVKKWVRIVSKRRQM 214
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
D E IQ KLFTFGSYRL V DID+LCV P + R +DFF + ML E P
Sbjct: 215 PDSE-IQSVGGKLFTFGSYRLNVHTRGADIDSLCVAPRHVDR-NDFFTSFYEMLAEDPNT 272
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V +A VPVIK K+ G+ +D+L+A+L +PED DS+L NLDE++V SLNG
Sbjct: 273 TELRQVQEAFVPVIKLKYYGIEMDILFARLALPRVPEDQQLNDDSILRNLDEKSVRSLNG 332
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D IL LVPNI NF LR ++ WAK GIYSN +G+LGG++WA+LVAR CQLYPN
Sbjct: 333 CRVADEILRLVPNISNFTYALRAIKLWAKNHGIYSNVLGYLGGVSWAILVARTCQLYPNT 392
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQY---QAMP---HHVWDPRSNQRDRKHLMPIIT 297
P LV +FF ++ W+WP+PV+L + + MP VWDPRS DR HLMPI+T
Sbjct: 393 GPARLVQKFFLLYTKWEWPHPVVLKETEISHARDMPSLQELVWDPRSRSGDRFHLMPIVT 452
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQI 357
P++P NS++NV+ ++L+I+ E + +I GK W LFE +FF +K++L +
Sbjct: 453 PAFPQQNSTFNVTKSSLKIIMNEIEEGLVTINDIMKGKTGWSALFEEVNFFSRYKHFLAL 512
Query: 358 HIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENS----VKSSSQ- 412
+ D W G VES++R LI +ER + C ++ + + V+ S Q
Sbjct: 513 LCLSATEQDELVWCGLVESKIRFLIASLER-RESIRVCHVHTKYYQPRNDPFPVQVSLQN 571
Query: 413 --CH-YFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRC 466
C +F+GL + VS K D++ V+ F + M ++ + +GM + +LR
Sbjct: 572 PRCRLWFIGLDLNKTVS----RKIDIQHEVQSFMDLLNSMATTQNIYVEGMSVIPHYLRK 627
Query: 467 QDIPDFV----FPGGVRPPKSLNEKKRKRIEVIESTKL-----KKSESSTAGHSSGQKSS 517
++ ++ G + P KR+RI ++ + K+ S T+ +S S
Sbjct: 628 AELVKWLKMEDLTRGKKAP------KRRRIATSQNQQATGPLQNKTRSETSSIASCNSSG 681
Query: 518 QTESGVALDGSHGLKSGPSVEPSTSSVSSSTSASSRPQRPAV 559
+L G+ K+ + +S+VS T+ + Q PA
Sbjct: 682 AASPSTSLSGTEVSKNVQNDLAMSSTVSVPTAIDN--QSPAT 721
>gi|170090568|ref|XP_001876506.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647999|gb|EDR12242.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 600
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 199/489 (40%), Positives = 287/489 (58%), Gaps = 43/489 (8%)
Query: 42 VLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPC 101
VLGR+ +VK ++++V++ KG+S E+ A K+FTFGSYRLGV GP +DID LCV P
Sbjct: 70 VLGRVAALVKKFVRQVSIAKGLS-EQAANLAGGKIFTFGSYRLGVHGPGSDIDTLCVVPK 128
Query: 102 YATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPED 161
+ +R +DFF ML++ V +++ VP+A VP++K K +G+ +D L A+L S IP+D
Sbjct: 129 HVSR-EDFFEVFEPMLKDLEGVTEVSGVPEAYVPIVKTKISGIPLDFLMARLALSSIPDD 187
Query: 162 LDSLQDSLLHNLDEQTVLSL--NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSN 219
L D+LL NLDE+ V SL G RV D IL LVPN++ FR LRC++ WA+RR IYSN
Sbjct: 188 LSLQDDNLLRNLDERCVRSLGATGSRVIDEILRLVPNVQVFRDALRCIKLWAQRRAIYSN 247
Query: 220 AMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHV 279
GFLGG+ WALLVAR+CQLYPNA+ +VSRFF I W WP PV+L I+ + V
Sbjct: 248 VNGFLGGVAWALLVARICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLQVRV 307
Query: 280 WDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWI 339
W+P+ DR H MPIITP+YP S++NV+++T IM EEF+R ++ +++ G TW
Sbjct: 308 WNPKLYPADRSHRMPIITPAYPAMCSTHNVTASTQIIMTEEFKRGADIVDKVIVGSATWS 367
Query: 340 TLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYP 399
LF + FF ++ YLQ+ + NA +W G VESR+RQL+ +E +L
Sbjct: 368 ELFAKHDFFHKYRYYLQVIASTGNADLQIKWSGTVESRIRQLVMKLEYVDSLILAHPFIR 427
Query: 400 GD------FSENSVKSSSQCHYFMGL-GR-------KQGVSPQDGEKFDMRLTVE----- 440
G SE+ V++ ++ + GR K+G P F + L +E
Sbjct: 428 GFEQVSYCLSEDEVRAVAEGEISDSVAGRKKEDIEGKEGAGPVYSTTFYIGLAIEPKPTG 487
Query: 441 --------------EFKSHVVWMYSSWKQG-MQIHVSHLRCQDIPDFVFPGGVRPPKSLN 485
+F + +V M+ + + M I V H++ +PD VF G RPPK +
Sbjct: 488 ATGPRRLDISYPTTDF-TKLVKMWEKYDEATMGIVVRHIKSSGLPDNVFEPGERPPKLV- 545
Query: 486 EKKRKRIEV 494
+KR++V
Sbjct: 546 ---QKRVKV 551
>gi|17533995|ref|NP_496524.1| Protein F43G6.5 [Caenorhabditis elegans]
gi|5832750|emb|CAA90398.2| Protein F43G6.5 [Caenorhabditis elegans]
Length = 554
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 190/456 (41%), Positives = 280/456 (61%), Gaps = 16/456 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ P D+ T L+K L + +EE+ RV+VL +L+G VK WI+++T +
Sbjct: 25 ISTALPNAKDLELTSSLQKTLNQYNSYEPQEETSQRVKVLQKLNGCVKQWIQKITEARYP 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
D Q+ A +L FGSYRLGV DID L + P +ATR D FF +ML + P V
Sbjct: 85 KD--QLFNAGGQLMAFGSYRLGVHSSGADIDTLVLAPRHATRAD-FFSSFKQMLAKDPEV 141
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V +A VP++ K++G+ +D L+A+L +PEDLD L D+LL NLD+++V SLNG
Sbjct: 142 TNLCAVENAFVPIMTMKYSGIEIDFLFARLALKEVPEDLDILDDALLKNLDQESVRSLNG 201
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV + +L LVPN NF TLR ++ WAK GIYSN+MGF GGI WA+LVAR CQLYPNA
Sbjct: 202 CRVAENLLKLVPNQENFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQLYPNA 261
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMP-----HHVWDPRSNQRDRKHLMPIITP 298
P+ L+ + F IF+ WKWP PV+L I M VWDPR NQ DR HLMPI+TP
Sbjct: 262 SPSKLIQKVFFIFSTWKWPAPVLLDFISSDRMDLAQLNQLVWDPRRNQSDRYHLMPIVTP 321
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIH 358
++P NS++NVS ++++++QEE + A C+ I+ G W+ L E +FF +K+++ +
Sbjct: 322 AFPQQNSTHNVSRSSMKVIQEEMKDALITCDNIQNGSCNWMDLLEEINFFSRYKHFISLS 381
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMG 418
+ A+ D + G+ ESR+RQL+ ++E++ G L + P F + K + +F+G
Sbjct: 382 MTAETEKDELAFGGFFESRIRQLVLILEKNQGIKL-AHINPKKFK--AAKDPKKSVWFIG 438
Query: 419 LGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWK 454
L + V + D+ +++FK ++ + S K
Sbjct: 439 LQFDENV-----KNLDLTKDIQQFKRNIDYQAKSVK 469
>gi|391336102|ref|XP_003742422.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 576
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 180/388 (46%), Positives = 242/388 (62%), Gaps = 7/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D+ +KELE +L + LF S E R++VLGR++ +V+ WI+ V++ KG+
Sbjct: 23 ISVALPRPVDLDKSKELEAVLHEFGLFESASELDHRLQVLGRINELVQQWIQEVSIAKGV 82
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E K+FTFGSYRLGV DID LCV P + R DFF +L++ P V
Sbjct: 83 P-ENIASSTRGKIFTFGSYRLGVHTKGADIDTLCVAPRHVER-TDFFTSFVELLKQQPQV 140
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
DL V +A VPVIK +F+G+ D+L+A+L IP D + +LL NLD + V SLNG
Sbjct: 141 RDLRAVEEAYVPVIKMEFDGIEFDMLFARLALKDIPPDQELRDMTLLKNLDAKCVRSLNG 200
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVP+I FR+ LR ++ WAK++G+YSN +G+LGG++WA+LVAR CQLYP+A
Sbjct: 201 CRVTDEILHLVPDIPVFRTALRTIKLWAKKKGVYSNVLGYLGGVSWAMLVARTCQLYPHA 260
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPH----HVWDPRSNQRDRKHLMPIITPS 299
V+V +FF +F+ W WP PV L Q A H VWD R+N DR HLMPIITP
Sbjct: 261 AAAVVVQKFFLVFSQWPWPKPVHLR-TQTAAHQHLGGFSVWDSRTNVADRYHLMPIITPV 319
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
YP NS++N S +T IM + F+ + E I GK TW LF P FFG +K ++ +
Sbjct: 320 YPEQNSTFNTSLSTRTIMTKAFKEGLAVTENILKGKGTWHDLFSPPEFFGQYKTFIMLTA 379
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
A D W G VES++R LI +ER
Sbjct: 380 VANTKEDLLTWYGLVESKIRTLIISLER 407
>gi|241955483|ref|XP_002420462.1| poly(A) polymerase, putative; polynucleotide adenylyltransferase,
putative [Candida dubliniensis CD36]
gi|223643804|emb|CAX41541.1| poly(A) polymerase, putative [Candida dubliniensis CD36]
Length = 558
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 206/550 (37%), Positives = 311/550 (56%), Gaps = 46/550 (8%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IST+ PT + I L + L + F SE+ + RVEVL +V++++ V+ K
Sbjct: 10 EPISTNGPTPKENILNDTLIQELKNRGSFESEQATKKRVEVLTLFQQLVQEFVYTVSKSK 69
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
+SD Q+A K+FTFGSYRLGV GP +DID L V P + TR DDFF ++++ P
Sbjct: 70 NMSDA-MAQDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTR-DDFFSVFADIIRKRP 127
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
+E++ VPDA VP+IK +F+G+S+DL+ A+L +P DL +LL NLDE+ + SL
Sbjct: 128 ELEEIACVPDAYVPIIKIEFDGISIDLIMAKLNIPRVPLDLTLDDKNLLKNLDEKDLRSL 187
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RVTD IL LVP F+ LRC++ WA++R +Y N GF GG+ WA+LVAR+CQLYP
Sbjct: 188 NGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQLYP 247
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NA+ +V+V +FF I+ W WP PV+L I+ + VW+PR DR H MP+ITP+YP
Sbjct: 248 NAVSSVIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYP 307
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
+++N++S+T +++ E R + ++I AGK++W LFE + FF +K YL + A
Sbjct: 308 SMCATHNITSSTQKVILAELSRGSSIMQDIHAGKKSWSDLFEKHCFFYKYKFYLCVVAAT 367
Query: 362 -KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFS----------ENSVKSS 410
+A + ++W G++ES+LRQL+ +E GV Y DFS E+ + S
Sbjct: 368 IDSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFSHTFLLDDKNAEDIINSY 426
Query: 411 SQ---------------------------CHYFMGLGRKQGVSPQDGEKFDMRLTVEEFK 443
Y++GL S K D++ EF
Sbjct: 427 GTLSGEAFLRTLHSSDSDKDSDEHNKIRLTKYYIGLDLNLTKSSDGVRKLDIQYPCAEFY 486
Query: 444 SHVVWMYSSWKQGMQ-IHVSHLRCQDIPDFVFPGG-VRPPKSLNEKKRKRIEVIESTKLK 501
S + +S+ +G+ I + +++ D+P+ V+ G RP KS KKRK++ + K
Sbjct: 487 S-ICKGSTSFTEGVNFIQIKNVKLHDLPNDVYEDGEERPIKS--GKKRKKVIKEDGQKRV 543
Query: 502 KSESSTAGHS 511
++ESS + S
Sbjct: 544 RNESSASSAS 553
>gi|345492821|ref|XP_001602912.2| PREDICTED: poly(A) polymerase gamma-like [Nasonia vitripennis]
Length = 605
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 217/598 (36%), Positives = 319/598 (53%), Gaps = 74/598 (12%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P + D+ T EL++ L +F SEEE R+E+L +L+ +VK WI+ ++ + +
Sbjct: 31 ISMAEPKLSDLSRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRDTSIARNM 90
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
Q K++TFGSYRLGV DIDALCV P + R D+F F +L+ V
Sbjct: 91 PPNVADQ-VGGKIYTFGSYRLGVHHKGADIDALCVVPRHINR-SDYFSSFFDLLKSQMEV 148
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
DL V +A VPVIK F+G+ +D+L+A+L +P+ +D D LL NLD++ V SLNG
Sbjct: 149 TDLRAVEEAYVPVIKMNFDGIEIDMLFAKLALKEVPDSMDLRDDMLLKNLDQKCVRSLNG 208
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR LR ++ WAK+ GIYSN +G+LGG++WA+LVAR CQLYPNA
Sbjct: 209 CRVTDEILRLVPNIENFRLALRAIKLWAKKNGIYSNVLGYLGGVSWAMLVARTCQLYPNA 268
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ L+ +FF +F+ WKWP PV+L + + VWDPR DR
Sbjct: 269 VAATLIEKFFLVFSQWKWPQPVLLKSPENVNLGFQVWDPRVTMSDRT------------- 315
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
IMQE F+ + EEI GK +W LFEP +FFG +++Y+ + ++
Sbjct: 316 ------------IMQEAFETGLAITEEIIMGKASWDKLFEPPNFFGKYRHYIVLLASSST 363
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCH---YFMGLG 420
A D +W G VES++R LI +ER+ L + P F +K + H +F+GL
Sbjct: 364 AEDQLEWCGLVESKIRHLIGTLERNPNITL-AHINPESFP--PLKPEAGKHVSMWFIGLT 420
Query: 421 RKQGVSPQDGEKFDMRLTVE--EFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFP--- 475
K+G + D++ VE E ++ + ++ K GM I H++ +D+ +++
Sbjct: 421 FKKGENLNIDLTMDIKSFVETTERQAEQIKLF---KNGMTIEAKHVKRKDLSNYIAANQI 477
Query: 476 -------------------GGVRPPKSLNE--KKRKRIEVIEST-KLKKSESSTAGHSSG 513
GGV P ++ +KRK + +ES K +K + S H
Sbjct: 478 KRERKTSSSTQRNGNSSGNGGVSPRNQGDQTLRKRKSDQSLESNDKKRKIQDSEQQHQHP 537
Query: 514 QKSS-QTESGVALDGSHGLKSG---------PSVEPST-SSVSSSTSASSRPQRPAVS 560
Q ++ Q E G + S G S P++ P+ +VSS+TSA S PA S
Sbjct: 538 QSTTQQKEDGTLVVQSCGDDSNSGFSLEEYKPNLTPAKDDTVSSTTSAPSSKPTPATS 595
>gi|302684083|ref|XP_003031722.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
gi|300105415|gb|EFI96819.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
Length = 558
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 209/572 (36%), Positives = 308/572 (53%), Gaps = 67/572 (11%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ + D T+ L + L + F S++ES R VLGR+ +VK ++ V G+
Sbjct: 12 ISTAESSAEDQKLTESLMQELRAQSTFESDQESRTREIVLGRISALVKKFVTTVAKAHGL 71
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD A K+FTFGSYRLGV GP +DID LCV P + R D+FF ML+E P +
Sbjct: 72 SDATA-NAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVNR-DEFFSVFEPMLREEPNI 129
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDLDSLQDSLLHNLDEQTVLSLN 182
+++ VPDA VP+IK K G+ +DLL A++ Q S IP+DL + LL NLDE+ + SL
Sbjct: 130 TEVSGVPDAFVPIIKIKMMGIPLDLLMARMVQLSSIPDDLSLQNNELLRNLDERCIKSLG 189
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
G R+ D ILSL+PN + FR LRC++ WA+RR IYSN GFLGG+ WA+LVAR+CQLYPN
Sbjct: 190 GSRLVDEILSLIPNHQVFRDALRCIKLWAQRRAIYSNINGFLGGVAWAMLVARICQLYPN 249
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
A+ +V RFF I W+WP PV+L I+ + +W+P+ DR H MPIITPSYP
Sbjct: 250 AVAGTIVRRFFGIMWRWQWPQPVLLKQIEEGPLEVRIWNPQVYPSDRAHRMPIITPSYPS 309
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK 362
NS++NVS +T +M EF+R ++ +I+ G+ +W LF + FF F++YLQI +A
Sbjct: 310 MNSTHNVSYSTQTVMIHEFKRGLDIVGQIQKGEASWADLFNKHTFFTDFRHYLQIVASAD 369
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERDMGGVLQC---------RLY------------PGD 401
+ +W QL+ ++ G ++Q R+Y G
Sbjct: 370 DQHSHDKW---------QLVLRLDAQEGSIIQVTRPFIKGFERIYHCISDDERRAATEGR 420
Query: 402 FSE----------NSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYS 451
FS+ + + +F+GL K P+DG +L + +
Sbjct: 421 FSDLKAAEGRPAGDKTTTVYTTAFFLGLEFK----PKDGNSGTRQLNISFPTGEFCNLVK 476
Query: 452 SW----KQGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKSESST 507
W + M+++V H++ ++P+FV+ +S E+ RKR V KSE
Sbjct: 477 KWETYDETKMRVNVRHIKRSELPEFVY-------ESPAERPRKRKSVAGGHSPDKSEKK- 528
Query: 508 AGHSSGQKSSQTESGVALD--GSHGLKSGPSV 537
++ S +GV D G+ ++S P +
Sbjct: 529 ------RRVSAVPNGVKADTNGAASVRSTPGI 554
>gi|58865618|ref|NP_001012020.1| poly(A) polymerase beta [Rattus norvegicus]
gi|50927350|gb|AAH79046.1| Poly (A) polymerase beta (testis specific) [Rattus norvegicus]
gi|149034991|gb|EDL89711.1| poly (A) polymerase beta (testis specific) [Rattus norvegicus]
Length = 642
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 212/551 (38%), Positives = 316/551 (57%), Gaps = 16/551 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D T++L + L +F EEE R+ +L +L+ +VK+WI+ ++ + +
Sbjct: 27 ISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIREISESRNL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R +DFF + L+ V
Sbjct: 87 P-QAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-NDFFTSFYDKLKLQEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI +FR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 265 IASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 325 NSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPT 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENVDKEEFRTMWVIGLV 443
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ P++ E + LT ++ F V + ++ M+I HLR +++ + P
Sbjct: 444 LKK---PENSEILSIDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHLRRKELHQ-LLP 499
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
V K + + R+ + + L S S ++ + ++G G ++ P
Sbjct: 500 NHVLQKKETHLTEGVRLTAVNDSSLLLSIDSENSMTAPSPTGTIKTGPLTANPQG-RNSP 558
Query: 536 SVEPSTSSVSS 546
++ +SV++
Sbjct: 559 ALAVMAASVTN 569
>gi|18203580|sp|Q9WVP6.2|PAPOB_MOUSE RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
Length = 641
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 212/551 (38%), Positives = 318/551 (57%), Gaps = 16/551 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D T++L + L +F EEE R+ +L +L+ +VK+WI+ ++ + +
Sbjct: 26 ISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIREISESRNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R +DFF + L+ V
Sbjct: 86 P-QAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-NDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI +FR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F E + K + + +GL
Sbjct: 384 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKETADKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ P++ E + LT ++ F V + ++ M+I HLR +++ + P
Sbjct: 443 LKK---PENSEILSIDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHLRRKELHQ-LLP 498
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
V K + + R+ + + L S S ++ + ++G L G+ ++ P
Sbjct: 499 NHVLQKKETHLTESVRLTAVTDSSLLLSIDSENSMTAPSPTGTMKTG-PLTGNPQGRNSP 557
Query: 536 SVEPSTSSVSS 546
++ +SV++
Sbjct: 558 ALAVMAASVTN 568
>gi|9910588|ref|NP_064327.1| poly(A) polymerase beta [Mus musculus]
gi|5701744|dbj|BAA83086.1| testis-specific poly(A) polymerase [Mus musculus]
gi|120538333|gb|AAI29898.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|120538567|gb|AAI29897.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|148687152|gb|EDL19099.1| poly (A) polymerase beta (testis specific) [Mus musculus]
Length = 642
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 212/551 (38%), Positives = 318/551 (57%), Gaps = 16/551 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D T++L + L +F EEE R+ +L +L+ +VK+WI+ ++ + +
Sbjct: 27 ISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIREISESRNL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R +DFF + L+ V
Sbjct: 87 P-QAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-NDFFTSFYDKLKLQEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI +FR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 265 IASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 325 NSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPT 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F E + K + + +GL
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKETADKEEFRTMWVIGLV 443
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ P++ E + LT ++ F V + ++ M+I HLR +++ + P
Sbjct: 444 LKK---PENSEILSIDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHLRRKELHQ-LLP 499
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
V K + + R+ + + L S S ++ + ++G L G+ ++ P
Sbjct: 500 NHVLQKKETHLTESVRLTAVTDSSLLLSIDSENSMTAPSPTGTMKTG-PLTGNPQGRNSP 558
Query: 536 SVEPSTSSVSS 546
++ +SV++
Sbjct: 559 ALAVMAASVTN 569
>gi|336374059|gb|EGO02397.1| hypothetical protein SERLA73DRAFT_120990 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386978|gb|EGO28124.1| hypothetical protein SERLADRAFT_367679 [Serpula lacrymans var.
lacrymans S7.9]
Length = 558
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 190/476 (39%), Positives = 280/476 (58%), Gaps = 39/476 (8%)
Query: 42 VLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPC 101
VLGR+ +VK ++++V+M +G+S E A K+FTFGSYRLGV GP +DID LCV P
Sbjct: 52 VLGRVAALVKKFVRQVSMARGLS-EAAATAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPK 110
Query: 102 YATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPED 161
+ +R +DFF ML+E +++ VP+A VP+IK K G+ DLL A+L S IP+D
Sbjct: 111 HVSR-EDFFEVFEPMLKEADGASEVSGVPEAYVPIIKAKLMGIPFDLLMARLALSSIPDD 169
Query: 162 LDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAM 221
L D+LL NLDE+ + SL G RV D IL LVPN+ FR +LRC++ WA+RR IYSN
Sbjct: 170 LSLKDDNLLRNLDERCIRSLGGSRVVDEILRLVPNVHVFRDSLRCIKLWAQRRAIYSNVN 229
Query: 222 GFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWD 281
GFLGG+ WA+LVAR+CQLYPNA+ +VSRFF I W WP PV+L I+ + VW+
Sbjct: 230 GFLGGVAWAMLVARICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWN 289
Query: 282 PRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITL 341
P+ DR H MPIITP+YP S++NV+++T IM EEF++ ++ +++ G W L
Sbjct: 290 PKLYPADRSHRMPIITPAYPAMCSTHNVTASTQMIMTEEFKKGADIVDKVIVGTAEWSEL 349
Query: 342 FEPYHFFGSFKNYLQIHIAAKNAGDFR-QWKGWVESRLRQLIHMIE------------RD 388
F + FF ++ YLQ+ IA+ + D + +W G VESR+RQL+ +E +
Sbjct: 350 FAKHDFFHKYRYYLQV-IASTGSADLQIKWSGTVESRIRQLVMKLEYVDSLILAHPFIKG 408
Query: 389 MGGVLQCR-------LYPGDFSE----------NSVKSSSQCH---YFMGLGRKQGVSPQ 428
+ C + G+ S+ V+ +++ H +++GL +
Sbjct: 409 FEQIAYCTSDEEVRAVAQGETSDAITRRKKEDIAGVEGATEVHTTTFYIGLAIEPKQPGA 468
Query: 429 DG-EKFDMRLTVEEFKSHVVWMYSSWKQ-GMQIHVSHLRCQDIPDFVFPGGVRPPK 482
G + D+ EF + +V M+ + + M I V H++ +PD+VF G R P+
Sbjct: 469 AGPRRLDISYPTTEF-TKLVKMWEKYDEPTMGIVVRHIKSAALPDYVFDEGERQPR 523
>gi|241643377|ref|XP_002411054.1| poly(A) polymerase, putative [Ixodes scapularis]
gi|215503685|gb|EEC13179.1| poly(A) polymerase, putative [Ixodes scapularis]
Length = 492
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 189/463 (40%), Positives = 270/463 (58%), Gaps = 5/463 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P DV T++LE L LF S +E R+EVL +++ +VK WI V++ K +
Sbjct: 33 ISMAPPKASDVARTRDLEDTLRQFGLFESADELAHRMEVLSKINELVKQWIYDVSVKKNM 92
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K++TFGSYRLGV DID LCV P + R DFF +L++ V
Sbjct: 93 PPSVA-ENVGGKIYTFGSYRLGVHTKGADIDTLCVAPRHVDR-TDFFSSFVELLRQQEEV 150
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F G+ +D+L+A+L IPE D ++L NLD + V SLNG
Sbjct: 151 KDLRAVEEAFVPVIKMTFAGIELDMLFARLALKDIPEQQDLRDVNILKNLDPKCVRSLNG 210
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR +LR ++ WAK+ G+YSN +G+LGG++WA+LVAR CQLYPNA
Sbjct: 211 CRVTDEILHLVPNRETFRLSLRAIKLWAKKHGVYSNVLGYLGGVSWAMLVARTCQLYPNA 270
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
LV +FF +F+ W WP PV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 271 AAATLVHKFFLVFSQWPWPKPVLLKQPEENKLGFPVWDPRINVADRFHLMPIITPAYPQQ 330
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS++NVS +T IM++EF++ + +EI G+ WI LFEP +FFG +K+++ +
Sbjct: 331 NSTFNVSVSTRTIMRQEFKQGLAITDEIMLGRTEWIKLFEPPNFFGKYKHFIVLMATTMT 390
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSS-QCHYFMGLGRK 422
+W G VES++R LI +ER + + P F Q +F+GL
Sbjct: 391 KEHHLEWYGLVESKIRILISNLERH-PYIEIAHVNPESFPPCEPDGDKLQSMWFIGLQFS 449
Query: 423 QGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLR 465
+ +D+R V+ K + + KQ M++ + ++R
Sbjct: 450 KTEHVNVDLTYDIRSFVDTVKRQATAI-NILKQDMEVDIKYVR 491
>gi|312067061|ref|XP_003136565.1| hypothetical protein LOAG_00977 [Loa loa]
gi|307768265|gb|EFO27499.1| hypothetical protein LOAG_00977 [Loa loa]
Length = 859
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 202/542 (37%), Positives = 303/542 (55%), Gaps = 34/542 (6%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS S P D++ + +L++ L F +EEE R++VL +++ VK W++ V+ + +
Sbjct: 159 ISISGPDEFDIVMSAKLDEYLQANGYFETEEEMNLRLKVLSKINAYVKKWVRVVSKRRQM 218
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
D E +Q KLFTFGSYRL V DID+LCV P + R +DFF + ML E P
Sbjct: 219 PDSE-VQSVGGKLFTFGSYRLNVHTRGADIDSLCVAPRHVDR-NDFFTSFYEMLAEDPNT 276
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V +A VPVIK K+ G+ +D+L+A+L +PED DS+L NLDE++V SLNG
Sbjct: 277 TELRQVQEAFVPVIKLKYYGIEMDILFARLALPRVPEDQQLNDDSILRNLDEKSVRSLNG 336
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D IL LVPN+ NF LR ++ WAK GIYSN +G+LGG++WA+LVAR CQLYPN
Sbjct: 337 CRVADEILRLVPNVSNFTYALRAIKLWAKNHGIYSNVLGYLGGVSWAILVARTCQLYPNT 396
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQ------AMPHHVWDPRSNQRDRKHLMPIIT 297
P LV +FF ++ W+WP+PV+L + A+ VWDPRS DR HLMPI+T
Sbjct: 397 GPARLVQKFFLLYTKWEWPHPVVLKETEVSHARDMPALQELVWDPRSRSGDRFHLMPIVT 456
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQI 357
P++P NS++NV+ ++L+I+ E + +I GK W LFE +FF +K++L +
Sbjct: 457 PAFPQQNSTFNVTKSSLKIIMNEIEEGLVTINDIMKGKAEWSALFEEVNFFSRYKHFLAL 516
Query: 358 HIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENS----VKSSSQ- 412
+ D W G VES++R LI +ER + C ++ + + V+ S Q
Sbjct: 517 LCLSATEQDELVWCGLVESKIRFLIASLER-RESIRVCHVHTKYYQPRNDPLPVQVSLQN 575
Query: 413 --CH-YFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRC 466
C +F+GL + VS K D++ V+ F + M ++ + +GM + +LR
Sbjct: 576 PRCRLWFIGLDLNKTVS----RKIDIQHEVQSFMDLLNSMATTQNIYVEGMSVIPHYLRK 631
Query: 467 QDIPDFV----FPGGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESG 522
++ ++ G + P KR+RI ++ + S A + +S SG
Sbjct: 632 AELVKWLKMEDLTKGRKAP------KRRRIAASQNQQPIGPSQSKARSETSSITSCNSSG 685
Query: 523 VA 524
A
Sbjct: 686 AA 687
>gi|426254899|ref|XP_004021112.1| PREDICTED: poly(A) polymerase beta [Ovis aries]
Length = 639
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 218/560 (38%), Positives = 315/560 (56%), Gaps = 23/560 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D I T++L + L +F EEE R+ +L +L+ +VK+WI+ ++ K +
Sbjct: 27 ISLAPPRETDCILTQKLIETLKPFGVFEEEEELQRRILILEKLNNLVKEWIREISESKSL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 87 P-QAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLHEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 265 IASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 325 NSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPT 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F E+ K + + +GL
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKESPDKEEFRTMWVIGLV 443
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFP 475
K+ P++ E + LT ++ F V + K M+I HL+ +++ +
Sbjct: 444 LKK---PENSEVLSIDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHLKRKELHQLL-- 498
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
P L +KK E + T L ++ + S G +SS S + G G
Sbjct: 499 ----PNHVLQKKKTLSTEGVRLTAL---DAGSRDLSVGSESSTPVSSLPAASQTGPVPGS 551
Query: 536 SVEPSTSSVSSSTSASSRPQ 555
+ ++ ++S S P+
Sbjct: 552 APGGNSRGPAASVSGVQFPE 571
>gi|5456696|gb|AAD43624.1|AF039957_1 testis-specific poly(A) polymerase [Mus musculus]
Length = 641
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 211/551 (38%), Positives = 317/551 (57%), Gaps = 16/551 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D T++L + L +F EEE R+ +L +L+ +VK+WI+ ++ + +
Sbjct: 26 ISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIREISESRNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R +DFF + L+ V
Sbjct: 86 P-QAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-NDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + S NG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSFNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI +FR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F E + K + + +GL
Sbjct: 384 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKETADKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ P++ E + LT ++ F V + ++ M+I HLR +++ + P
Sbjct: 443 LKK---PENSEILSIDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHLRRKELHQ-LLP 498
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGP 535
V K + + R+ + + L S S ++ + ++G L G+ ++ P
Sbjct: 499 NHVLQKKETHLTESVRLTAVTDSSLLLSIDSENSMTAPSPTGTMKTG-PLTGNPQGRNSP 557
Query: 536 SVEPSTSSVSS 546
++ +SV++
Sbjct: 558 ALAVMAASVTN 568
>gi|66357032|ref|XP_625694.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
gi|46226666|gb|EAK87645.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
Length = 699
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 193/497 (38%), Positives = 288/497 (57%), Gaps = 38/497 (7%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + T D T+ L + E L+ S E R VL L+ +V++WI +++ +
Sbjct: 26 ISEAMATPQDYKLTENLIIAMRQENLYESVEGMKKREYVLASLNKLVREWIYEASLEHSM 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
++EE + A +FTFGSYRLGV +DID LC+ P + +R + FF LQ+ V
Sbjct: 86 NEEEALS-AGGGIFTFGSYRLGVVAAGSDIDTLCIAPRHISR-ESFFSFFLAKLQQDINV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ PVPDA P+IK ++G+ +DLL+A L S IP DL++L D LL N+D++T SLNG
Sbjct: 144 TKVQPVPDAYTPIIKMVYHGMEMDLLFACLNLSRIPNDLNTLDDDLLKNVDDKTARSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D IL LVPN +FR+ LR ++ W+K RGIYSN +G+LGGI+WA+L AR+CQLYPNA
Sbjct: 204 CRVNDMILQLVPNKESFRTALRFVKHWSKARGIYSNVLGYLGGISWAILTARICQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQY------QAMPHHVWDPRSNQRDRKHLMPIIT 297
P+ +++RFF I+ W+W NPV+LC I+ M VW+P N +DR H+MPIIT
Sbjct: 264 APSQIINRFFYIYKTWQWKNPVILCEIKEVPKNTPGLMGFRVWNPNLNPQDRAHVMPIIT 323
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQI 357
P++P NS++NV+ TTL ++ +E QRA + ++IE K TW ++ P+ FF K+++Q+
Sbjct: 324 PAFPSMNSTHNVTHTTLGVITDELQRAYRIIQDIENDKATWHDVWSPFLFFEKHKHFIQV 383
Query: 358 HIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSS----SQC 413
+ + N F +W GW+ES+LR L+ +E G LQ R +P E +Q
Sbjct: 384 KMLSNNEQAFHKWIGWIESKLRFLVRKLETFKG--LQVRPWPKAIQEQDEAKDGFIFAQS 441
Query: 414 HYF------------------MGLGRKQGVSPQDGEKFDMRLTVEEFKSHVV-WM-YSSW 453
Y G+ G +P D+R + +F ++ W ++
Sbjct: 442 MYIGLVLNNSNSNNGSSSTGVTGVSNSSGTAPV----VDLRGAILDFVGFIMNWSEVENY 497
Query: 454 KQGMQIHVSHLRCQDIP 470
K + + V HLR +D+P
Sbjct: 498 KDSIDLKVRHLRAKDLP 514
>gi|221508263|gb|EEE33850.1| poly(A) polymerase, putative [Toxoplasma gondii VEG]
Length = 778
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 202/501 (40%), Positives = 293/501 (58%), Gaps = 41/501 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
++ P D+ + EL +L L+ + +L R VL L+ IV DW+ V M++G+
Sbjct: 200 VNVKLPQEGDLHRSNELISVLRALNLYETAAGNLQRERVLNELNRIVVDWVVEVGMEQGL 259
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
DE++ ++A K+FTFGSYRLGV P +DID LCV P + +R D FF L+ LQ+ V
Sbjct: 260 -DEQEARQAGGKIFTFGSYRLGVVTPGSDIDTLCVTPRHVSR-DAFFKILYAKLQQDARV 317
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSL-LHNLDEQTVLSLN 182
LTPVPDA PV+KF F+GV +DLL+A+L VIP +SL++ L L ++DE+T S+N
Sbjct: 318 SKLTPVPDAYTPVLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVDEKTARSVN 377
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
G RV D IL LVPN F+ TLR ++ WAK RGIYSN +G+LGG++WA+LVAR CQLYPN
Sbjct: 378 GSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVARCCQLYPN 437
Query: 243 ALPNVLVSRFFKIFAHWKWPN-PVMLCPIQYQAMP----HHVWDPRSNQRDRKHLMPIIT 297
P+ LV RFF +++ W W N PV+LC I+ + VW+P+ N +DR HL+PIIT
Sbjct: 438 FAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHLLPIIT 497
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHF------FGSF 351
P++P NS++NVS +T R++ EEF AK + + + K+ I+ E H F SF
Sbjct: 498 PAFPSMNSTHNVSLSTKRVITEEFANAKRIFDIWD--KKKEISWTEALHLVLKPLDFTSF 555
Query: 352 KNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIER-------DMGG-------VLQCRL 397
K++L++ + A+N R+W GWVES++R L+ +ER + GG + R
Sbjct: 556 KHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFEAAMTVRP 615
Query: 398 YPGDFS--ENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHV-VWMYSSWK 454
P FS E + +S + ++ V D+R EF + W +
Sbjct: 616 IPCTFSFQEPGWECASSMLVALNFAQQPCV-------IDLRPAAGEFVDLINQWPERAQL 668
Query: 455 QG-MQIHVSHLRCQDIPDFVF 474
G +Q+ V HLR +P +V
Sbjct: 669 DGQIQLRVKHLRRSQLPAYVL 689
>gi|221486493|gb|EEE24754.1| poly(A) polymerase, putative [Toxoplasma gondii GT1]
Length = 795
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 202/501 (40%), Positives = 293/501 (58%), Gaps = 41/501 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
++ P D+ + EL +L L+ + +L R VL L+ IV DW+ V M++G+
Sbjct: 219 VNVKLPQEGDLHRSNELISVLRALNLYETAAGNLQRERVLNELNRIVVDWVVEVGMEQGL 278
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
DE++ ++A K+FTFGSYRLGV P +DID LCV P + +R D FF L+ LQ+ V
Sbjct: 279 -DEQEARQAGGKIFTFGSYRLGVVTPGSDIDTLCVTPRHVSR-DAFFKILYAKLQQDARV 336
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSL-LHNLDEQTVLSLN 182
LTPVPDA PV+KF F+GV +DLL+A+L VIP +SL++ L L ++DE+T S+N
Sbjct: 337 SKLTPVPDAYTPVLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVDEKTARSVN 396
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
G RV D IL LVPN F+ TLR ++ WAK RGIYSN +G+LGG++WA+LVAR CQLYPN
Sbjct: 397 GSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVARCCQLYPN 456
Query: 243 ALPNVLVSRFFKIFAHWKWPN-PVMLCPIQYQAMP----HHVWDPRSNQRDRKHLMPIIT 297
P+ LV RFF +++ W W N PV+LC I+ + VW+P+ N +DR HL+PIIT
Sbjct: 457 FAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHLLPIIT 516
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHF------FGSF 351
P++P NS++NVS +T R++ EEF AK + + + K+ I+ E H F SF
Sbjct: 517 PAFPSMNSTHNVSLSTKRVITEEFANAKRIFDIWD--KKKEISWTEALHLVLKPLDFTSF 574
Query: 352 KNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIER-------DMGG-------VLQCRL 397
K++L++ + A+N R+W GWVES++R L+ +ER + GG + R
Sbjct: 575 KHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFEAAMTVRP 634
Query: 398 YPGDFS--ENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHV-VWMYSSWK 454
P FS E + +S + ++ V D+R EF + W +
Sbjct: 635 IPCTFSFQEPGWECASSMLVALNFAQQPCV-------IDLRPAAGEFVDLINQWPERAQL 687
Query: 455 QG-MQIHVSHLRCQDIPDFVF 474
G +Q+ V HLR +P +V
Sbjct: 688 DGQIQLRVKHLRRSQLPAYVL 708
>gi|384487946|gb|EIE80126.1| hypothetical protein RO3G_04831 [Rhizopus delemar RA 99-880]
Length = 598
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 175/383 (45%), Positives = 248/383 (64%), Gaps = 2/383 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST T ++ T +L + L LF SE+E+ RV VLG+LD +VK+++ +V+ KG
Sbjct: 15 ISTEPSTEREIKLTNDLLETLKSYGLFESEQEAQKRVVVLGKLDKLVKEFVYKVSKMKGF 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
D +EA K+FT+GSYRLGV G DID LCV P + R + FF ++ ML+E P V
Sbjct: 75 PDS-LAREAGGKIFTYGSYRLGVHGAGADIDTLCVFPKHVER-EHFFTIMYDMLKERPEV 132
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+++ VPDA VPVIK F+G+ +D + A+L + +P+DL+ +++L NLDE+ V SLNG
Sbjct: 133 TEISAVPDAYVPVIKMHFSGIPIDFICARLAVARVPDDLELADNNILKNLDERCVRSLNG 192
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVPN+ FR LR ++ WAK + IYSN MGFLGG+ WA+L+AR+CQLYPNA
Sbjct: 193 SRVTDDILRLVPNVATFRIALRTIKLWAKCKAIYSNVMGFLGGVAWAMLIARICQLYPNA 252
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+V+RFF I WKWP PV+L P++ + VW+P+ DR H MPIITP+YP
Sbjct: 253 CAASIVNRFFLIMYQWKWPQPVLLRPLEDGPLQVRVWNPKLYPADRSHRMPIITPAYPSM 312
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++NV+ +T +IM +EF+ ++ I G W LF FF FK+YLQI ++ +
Sbjct: 313 CATHNVTESTRKIMIQEFKNGIDVASNIILGSGQWSDLFVKSDFFQQFKHYLQITSSSYS 372
Query: 364 AGDFRQWKGWVESRLRQLIHMIE 386
+ W G VE++LRQL+ +E
Sbjct: 373 SETQLMWSGLVEAKLRQLVLKLE 395
>gi|237833947|ref|XP_002366271.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
gi|211963935|gb|EEA99130.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
Length = 811
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 202/501 (40%), Positives = 293/501 (58%), Gaps = 41/501 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
++ P D+ + EL +L L+ + +L R VL L+ IV DW+ V M++G+
Sbjct: 230 VNVKLPQEGDLHRSNELISVLRALNLYETAAGNLQRERVLNELNRIVVDWVVEVGMEQGL 289
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
DE++ ++A K+FTFGSYRLGV P +DID LCV P + +R D FF L+ LQ+ V
Sbjct: 290 -DEQEARQAGGKIFTFGSYRLGVVTPGSDIDTLCVTPRHVSR-DAFFKILYAKLQQDARV 347
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSL-LHNLDEQTVLSLN 182
LTPVPDA PV+KF F+GV +DLL+A+L VIP +SL++ L L ++DE+T S+N
Sbjct: 348 SKLTPVPDAYTPVLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVDEKTARSVN 407
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
G RV D IL LVPN F+ TLR ++ WAK RGIYSN +G+LGG++WA+LVAR CQLYPN
Sbjct: 408 GSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVARCCQLYPN 467
Query: 243 ALPNVLVSRFFKIFAHWKWPN-PVMLCPIQYQAMP----HHVWDPRSNQRDRKHLMPIIT 297
P+ LV RFF +++ W W N PV+LC I+ + VW+P+ N +DR HL+PIIT
Sbjct: 468 FAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHLLPIIT 527
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHF------FGSF 351
P++P NS++NVS +T R++ EEF AK + + + K+ I+ E H F SF
Sbjct: 528 PAFPSMNSTHNVSLSTKRVITEEFANAKRIFDIWD--KKKEISWTEALHLVLKPLDFTSF 585
Query: 352 KNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIER-------DMGG-------VLQCRL 397
K++L++ + A+N R+W GWVES++R L+ +ER + GG + R
Sbjct: 586 KHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFEAAMTVRP 645
Query: 398 YPGDFS--ENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHV-VWMYSSWK 454
P FS E + +S + ++ V D+R EF + W +
Sbjct: 646 IPCTFSFQEPGWECASSMLVALNFAQQPCV-------IDLRPAAGEFVDLINQWPERAQL 698
Query: 455 QG-MQIHVSHLRCQDIPDFVF 474
G +Q+ V HLR +P +V
Sbjct: 699 DGQIQLRVKHLRRSQLPAYVL 719
>gi|409079597|gb|EKM79958.1| hypothetical protein AGABI1DRAFT_113202 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 615
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 204/523 (39%), Positives = 293/523 (56%), Gaps = 43/523 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDE----KLFASEEESLGRVEVLGRLDGIVKDWIKRVTM 59
ISTS T + KE+ L+DE +F +E+ES R VLGR+ +VK ++ +V +
Sbjct: 16 ISTSVSTERE----KEVTITLMDELRRQNMFETEDESQLREIVLGRVAQLVKKFVHKVAL 71
Query: 60 DKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE 119
+G+S E A K+FTFGSYRLGV GP +DID LCV P + TR DDFF +L+E
Sbjct: 72 LRGLS-ESAADSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTR-DDFFEYFEPLLRE 129
Query: 120 TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVL 179
V ++ VP+A VPV+K K +G+ +DLL A++ S IP+DL D+LL N+DE+ +
Sbjct: 130 LDGVTEVAGVPEAYVPVVKTKISGIPLDLLMARMTLSAIPDDLTLDDDNLLRNMDERCIR 189
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
SL G RVTD +L LVP+++ FR +LRC++ WA+RR IYSN GFLGG+ WA+LVAR+CQL
Sbjct: 190 SLGGSRVTDAMLRLVPDVQVFRDSLRCIKLWARRRAIYSNVNGFLGGVAWAMLVARICQL 249
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
YPNA +VSRFF I W WP PV+L I+ + VW+P+ DR H MPIITP+
Sbjct: 250 YPNATAGAIVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSHRMPIITPA 309
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
YP +++NV+ +T IM EEF++ ++ +++ G +W LF + FF ++ YLQ+
Sbjct: 310 YPAMCATHNVTESTQMIMTEEFKKGADIVDKVIVGSASWSDLFAKHDFFHKYRYYLQVIA 369
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPG------DFSENSVKSSSQC 413
+ N+ +W G VESR+RQLI +E L G +E V++ +Q
Sbjct: 370 STGNSDLQIKWAGTVESRIRQLIMKLEYVESLTLAHPFIKGFDQVAYCLNEEEVRAIAQG 429
Query: 414 HYFMGLGR--------KQGVSPQDGEKFDMRLTVE-------------------EFKSHV 446
+ K+G P F + L +E EF V
Sbjct: 430 ETSPAIAARKKEDVEGKEGAGPVYSTTFYIGLMIEPKQPGSSGPRRLDISYPTIEFTKQV 489
Query: 447 VWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKR 489
+ M + V H+R +PD+VF G RPPK ++ +
Sbjct: 490 KLWEKYDESTMGLIVRHIRSSSLPDYVFDPGERPPKVTQKRTK 532
>gi|426192448|gb|EKV42384.1| hypothetical protein AGABI2DRAFT_195729 [Agaricus bisporus var.
bisporus H97]
Length = 615
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 202/519 (38%), Positives = 290/519 (55%), Gaps = 35/519 (6%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
ISTS T + T L L + +F +E+ES R VLGR+ +VK ++ +V + +G+
Sbjct: 16 ISTSVSTEREKEVTITLMDELRRQNMFETEDESQLREIVLGRVAQLVKKFVHKVALLRGL 75
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E A K+FTFGSYRLGV GP +DID LCV P + TR DDFF +L+E V
Sbjct: 76 S-ESAADSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTR-DDFFEYFEPLLRELDGV 133
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
++ VP+A VPV+K K +G+ +DLL A++ S IP+DL D+LL N+DE+ + SL G
Sbjct: 134 TEVAGVPEAYVPVVKTKISGIPLDLLMARMTLSAIPDDLTLDDDNLLRNMDERCIRSLGG 193
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD +L LVP+++ FR +LRC++ WA+RR IYSN GFLGG+ WA+LVAR+CQLYPNA
Sbjct: 194 SRVTDAMLRLVPDVQVFRDSLRCIKLWARRRAIYSNVNGFLGGVAWAMLVARICQLYPNA 253
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+VSRFF I W WP PV+L I+ + VW+P+ DR H MPIITP+YP
Sbjct: 254 TAGAIVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSHRMPIITPAYPAM 313
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++NV+ +T IM EEF++ ++ +++ G +W LF + FF ++ YLQ+ + N
Sbjct: 314 CATHNVTESTQMIMTEEFKKGADIVDKVIVGSASWSDLFAKHDFFHKYRYYLQVIASTGN 373
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPG------DFSENSVKSSSQCHYFM 417
+ +W G VESR+RQLI +E L G +E V++ +Q
Sbjct: 374 SDLQIKWAGTVESRIRQLIMKLEYVESLTLAHPFIKGFDQVAYCLNEEEVRAIAQGETSP 433
Query: 418 GLGR--------KQGVSPQDGEKFDMRLTVE-------------------EFKSHVVWMY 450
+ K+G P F + L +E EF V
Sbjct: 434 AIAARKKEDVEGKEGAGPVYSTTFYIGLMIEPKQPGSSGPRRLDISYPTIEFTKQVKLWE 493
Query: 451 SSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKR 489
+ M + V H+R +PD+VF G RPPK ++ +
Sbjct: 494 KYDESTMGLIVRHIRSSSLPDYVFDPGERPPKVTQKRTK 532
>gi|330340378|ref|NP_001193351.1| poly(A) polymerase beta [Bos taurus]
Length = 642
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 220/572 (38%), Positives = 323/572 (56%), Gaps = 33/572 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D I T++L + L +F EEE R+ +L +L+ +VK+WI+ ++ K +
Sbjct: 27 ISLAPPRETDCILTQKLIETLKPFGVFEEEEELQRRILILEKLNNLVKEWIREISESKSL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 87 P-QAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLHEEV 144
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 145 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 204
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 205 CRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 264
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR + DR HLMPIITP+YP
Sbjct: 265 IASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVSPSDRYHLMPIITPAYPQQ 324
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 325 NSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPT 384
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F E+ K + + +GL
Sbjct: 385 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKESPDKEEFRTMWVIGLV 443
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFP 475
K+ P++ E + LT ++ F V + ++ M+I HL+ +++ +
Sbjct: 444 LKK---PENSEVLSIDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHLKRKELHQLL-- 498
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKS--ESSTAGHSSGQKSS---QTESGVALDGSHG 530
P L +KK E + T L + S G +S SS +++G + G
Sbjct: 499 ----PNHVLQKKKTLSTEGVRLTALDDGSLDLSVNGENSTPVSSLPAASKTGPVTGSTQG 554
Query: 531 LKSGPSVEPSTSSVSSSTSASSRPQRPAVSIE 562
S P+ ++++S + Q P VS++
Sbjct: 555 RNS-----PAPVAMAASVTGV---QFPEVSLQ 578
>gi|311250845|ref|XP_003124320.1| PREDICTED: poly(A) polymerase beta-like [Sus scrofa]
Length = 640
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 203/489 (41%), Positives = 290/489 (59%), Gaps = 18/489 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D + T++L + L +F EEE R+ +L +L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAPPRETDCVLTQKLIETLKPFGVFEEEEELQRRILILEKLNYLVKEWIRELSESKSL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLHEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAVKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + EI K W LFE FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIALLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFS---ENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F E+ K + + +GL
Sbjct: 384 EKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPRESPDKEEFRTMWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQD----IPD 471
K+ P++ + + LT ++ F V + ++ M+I HLR ++ +P+
Sbjct: 443 LKR---PENSDILSIDLTYDIQSFTDTVYRQAVNSKMFEMDMKIAAMHLRRKELHQLLPN 499
Query: 472 FVFPGGVRP 480
V P P
Sbjct: 500 HVLPQKKTP 508
>gi|213406289|ref|XP_002173916.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
gi|212001963|gb|EEB07623.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
Length = 563
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 191/537 (35%), Positives = 292/537 (54%), Gaps = 59/537 (10%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT + L L + LF S ++S RV VL L I +++++V++ K +
Sbjct: 12 ISTAPPTEKENALNTALVNELKAQNLFESAQDSEKRVRVLQELQAITTEFVRKVSLSKHM 71
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E+ E+ K+FT+GSYRLGV GP +DID L V P + +R ++FF L ML+ P +
Sbjct: 72 S-EKMASESGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVSR-ENFFQDLEPMLRARPEI 129
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
DL VP+A VP+IKFKF G+S+DL++A+L +P DL+ +LL ++E+ +LSLNG
Sbjct: 130 TDLAAVPEAYVPIIKFKFLGISIDLIFARLSIPRVPLDLELSDSNLLKGVEERCILSLNG 189
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD+IL LVPN F+ LR ++FWA+RR IY+N +GF GG+ WA++VAR+CQLYPNA
Sbjct: 190 TRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVARICQLYPNA 249
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ V+VS+FF+I + W WP PV+L PI + VW+P+ D+ H MPIITP+YP
Sbjct: 250 VSAVIVSKFFRILSQWNWPQPVLLKPIDDGPLQVRVWNPKLYPSDKAHRMPIITPAYPSM 309
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++N++ +T ++ E RA + ++I AGK+ W LFE + FF ++ YL + A+K
Sbjct: 310 CATHNITPSTQTVILREMARAGLIVDDIMAGKKPWSALFEKHDFFHRYRYYLTVTAASKT 369
Query: 364 AGDFRQWKGWVESRLRQLI------------HMIERDMGGVLQCRLY------------- 398
A +W G VES+LR + H + + C+
Sbjct: 370 ADSQLKWSGLVESKLRHFVTRLELVDAITLAHPFNKGFNKIYMCKTEEEAQQVANGVSTA 429
Query: 399 -----------------------PGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDM 435
GD ++ S +++GL ++ PQ ++ D+
Sbjct: 430 VVAKDANLEEAAKAGDQNEHKEGEGDAADEKKFSVYTTTFYIGLEIERKKGPQ-SKRLDI 488
Query: 436 RLTVEEFKSHVVWMYSSWKQ----GMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKK 488
+EF M W + M + + + R +PD VF G PK +K+
Sbjct: 489 TWPSQEFSE----MCKKWDKFDDTMMTVFIKNTRNYTLPDEVFEPGEERPKPPTKKR 541
>gi|19112154|ref|NP_595362.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe 972h-]
gi|26397523|sp|Q10295.1|PAP_SCHPO RecName: Full=Poly(A) polymerase pla1; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|1419256|emb|CAA56141.1| polymerase [Schizosaccharomyces pombe]
gi|4160340|emb|CAA22808.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe]
Length = 566
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 206/566 (36%), Positives = 308/566 (54%), Gaps = 72/566 (12%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ T + L L ++ LF S ES RV+VL L I +++K+V++ K +
Sbjct: 12 ISTAPATEQENALNTALINELKNQNLFESPAESEKRVKVLDELQQITTEFVKKVSLAKHM 71
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+E+ EA K+FT+GSYRLGV GP +DID L V P + +R D+FF L ML+E V
Sbjct: 72 -NEKMANEAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVSR-DNFFQDLEPMLREREEV 129
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
DL VPDA VP+IKFKF G+S+DL++A+L +P DL+ ++LL ++E+ VLSLNG
Sbjct: 130 TDLAAVPDAYVPIIKFKFLGISIDLIFARLSVPRVPRDLELSDNNLLKGVEERCVLSLNG 189
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD+IL LVPN F+ LR ++FWA+RR IY+N +GF GG+ WA++VAR+CQLYPNA
Sbjct: 190 TRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVARICQLYPNA 249
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ +V+V++FF+I W WP P++L PI+ + +W+P+ D+ H MPIITP+YP
Sbjct: 250 VSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMPIITPAYPSM 309
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++N++ +T I+ E RA E+ ++I W LF+ + FF +K+YL I AAK
Sbjct: 310 CATHNITLSTQTIILREMVRAGEIADQIMVKALPWSALFQKHDFFHRYKHYLTITAAAKT 369
Query: 364 AGDFRQWKGWVESRLRQLI------------HMIERDMGGVLQC-------RLYPG---- 400
A +W G VES+LR L+ H + V C ++ G
Sbjct: 370 AEAQLKWAGLVESKLRHLVTRLELVDAIALAHPFNKGFDKVYNCSSEEEAQQVASGVTLE 429
Query: 401 ----------------------------DFSENSVKS-----SSQCHYFMGLGRKQGVSP 427
D SEN K ++ C+ + L +K+G
Sbjct: 430 VAYESTDHEKLANDTVNEEKADNTESKADGSENGEKQIFPVYTTTCYIGLELEKKKG--- 486
Query: 428 QDGEKFDMRLTVEEFKSHVVWMYSSWKQG----MQIHVSHLRCQDIPDFVFPGGVRPPKS 483
++ D+ +EF + W + M + + + + +PD VF G PK+
Sbjct: 487 HPIKRLDISWPTQEFYE----LCKKWDKYDDTLMNVFIKNTKNTALPDEVFEPGEERPKA 542
Query: 484 LNEKKRKRIEVIEST-KLKKSESSTA 508
KKR + ST +LK+ + STA
Sbjct: 543 T--KKRSTADTAHSTEQLKRQKVSTA 566
>gi|430811842|emb|CCJ30698.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 639
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/442 (41%), Positives = 281/442 (63%), Gaps = 8/442 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + PT ++ L L K F S EES R +VLG L I +++++V++DK +
Sbjct: 68 VSMAGPTEHEIAVNAALIDELKLRKNFESPEESDKRAKVLGELQKITLEFVQKVSLDKHM 127
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ E ++A K+FT+GSYRLGV P +DID L V P + TR ++FF ++L+ P V
Sbjct: 128 T-ESMARDAGGKIFTYGSYRLGVYSPGSDIDTLMVVPRHVTR-ENFFTDFEQILRNRPEV 185
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+T VPDA VP+IKFKF+G+ +DL++A+L + +P DL ++LL N++E+ VLSLNG
Sbjct: 186 TGITAVPDAYVPIIKFKFSGIPIDLIFARLALAQVPMDLTLEDNNLLKNVEERCVLSLNG 245
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVPN F+ LR ++ WA++R IYSN MGF GG+ WA+LVAR+CQLYPNA
Sbjct: 246 TRVTDEILRLVPNPTIFKHALRAIKLWAQQRAIYSNVMGFPGGVAWAMLVARICQLYPNA 305
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ V++++FF+I + WKWP PV+L PI+ + VW+P+ + D+ H MPIITP+YP
Sbjct: 306 VSAVVIAKFFRILSQWKWPQPVLLKPIEDGPLQVRVWNPKIYKGDQAHRMPIITPAYPSM 365
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
S++N++ +T +++ E RA ++ ++I G W TLF + FF +K YL I A+K+
Sbjct: 366 CSTHNITESTQKVIINEMNRAGDIADKILNGTLPWSTLFAKHTFFHQYKYYLVIVAASKS 425
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRL-YPGDFSENSVKSSSQCHYFMGLGRK 422
A +W G VES++RQL+ +E V + +L +P + S +S+ G+
Sbjct: 426 AEMQLKWSGLVESKVRQLVLRLEY----VDEIKLAHPFNKSTDSLHYCKTEEEANGVAHG 481
Query: 423 QGVSPQDGEKFDMRLTVEEFKS 444
+ VS + E +M+ T++E +S
Sbjct: 482 ELVSTR-MENINMQQTIKEMES 502
>gi|367003753|ref|XP_003686610.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
gi|357524911|emb|CCE64176.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
Length = 555
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 203/548 (37%), Positives = 307/548 (56%), Gaps = 51/548 (9%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+ST+APT + EL + L E F SE+E+ RV+VL L + +D++ +V +K +
Sbjct: 13 VSTAAPTAAENKLNDELIQELKKEGSFESEQETNNRVKVLEILQKLTQDFVYKVYKNKNM 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD ++A K+FTFGSYRLGV GP +DID L V P Y TR +DFF + L+E +
Sbjct: 73 SDG-MAKDAGGKVFTFGSYRLGVHGPGSDIDTLVVVPKYVTR-EDFFTVFDQSLRERKEL 130
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+++ PVPDA VP+IK KF+G+S+DL+ A+L + +P +L +LL NLDE+ + +LNG
Sbjct: 131 DEIAPVPDAYVPIIKIKFSGISIDLICAKLDIAQVPINLQLNDKNLLRNLDEKDLRALNG 190
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVP FR LR ++ WA+RR +Y N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 191 TRVTDEILELVPKPIIFRIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLVARICQLYPNA 250
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
V+++RFFKI + WKWP PV+L PI+ + VW+P+ +DR H MP+ITP+YP
Sbjct: 251 CSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSM 310
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++N++ +T +++ +EF+R ++ +I + K TW LF+ + FF +K YL I A K
Sbjct: 311 CATHNITESTKKVILKEFERGMKITNDIFSNKLTWNDLFKKHTFFYDYKFYLTITTATKG 370
Query: 364 AG-DFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF-------------------- 402
D +W G VES++R LI +E + G+ Y F
Sbjct: 371 TDEDHLKWSGLVESKVRLLILKLEA-LPGITLTHPYVKPFETSYAYSNDEDAKMIINNYG 429
Query: 403 -------------------SENSVKSSSQCHYF-MGLGRKQGVSPQDGEKFDMRLTVEEF 442
S ++K S Q H M +G V + EK D+ + EF
Sbjct: 430 THKTEENLNNFTKITDENKSAENIKESKQLHMMTMYIGVAVNVENK-KEKIDIHVPCNEF 488
Query: 443 KSHVVWMYSSWKQG--MQIHVSHLRCQDIPDFVF-PGGVRPPKSLNEKKRKRIEVIESTK 499
+ + ++ + + +++ D+P+ V+ VRP K +K ++R E+
Sbjct: 489 LNLCRNINDDYQDADKFALSIRYVKLHDLPNEVYGEDDVRPSK---KKHKRRKGDAETDP 545
Query: 500 LKKSESST 507
KK +SST
Sbjct: 546 NKKPKSST 553
>gi|320165027|gb|EFW41926.1| poly(A) polymerase [Capsaspora owczarzaki ATCC 30864]
Length = 698
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 194/473 (41%), Positives = 274/473 (57%), Gaps = 33/473 (6%)
Query: 42 VLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPC 101
VL RLD IVK W+ +V K ++ E K+FTFGSYRLGV G DID LC+ P
Sbjct: 101 VLARLDSIVKQWVIQVLTAK--NEMPPDTEPGGKVFTFGSYRLGVHGRGADIDTLCIAPR 158
Query: 102 YATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVS-----------VDLLY 150
TR DDFF L +L+E +LTPV A P+I KF+GV +DLL+
Sbjct: 159 GVTR-DDFFQSLVELLREQSETSELTPVTGAFTPIITLKFSGVDNRSLASSAPLKIDLLF 217
Query: 151 AQLQFSV-IPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRF 209
A+L + + E+L+ + +++L N D TV S+NG RV + IL LVP+ NFR LR ++
Sbjct: 218 AELPGVLSVSENLNVMDNAILRNCDMATVRSVNGSRVANYILQLVPDRDNFRMALRAIKL 277
Query: 210 WAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCP 269
WA RG+YSN +GFLGGI WA+LVAR CQLYP + + +V+RFF++F +W WP PV L
Sbjct: 278 WANNRGVYSNKLGFLGGIAWAILVARTCQLYPKSSASTIVARFFRVFHNWSWPTPVWLKA 337
Query: 270 IQYQ---AMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKE 326
++ A+P+ W+P N D +HLMPIITP+YP NS++NVS +TLR+M EEF R +
Sbjct: 338 MEEDRSLALPN--WNPVINASDARHLMPIITPAYPSMNSTHNVSMSTLRVMTEEFARGMQ 395
Query: 327 LCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI-AAKNAGDFRQWKGWVESRLRQLIHMI 385
+ +IE GK W LFE +FF +K Y+QI +N + RQW+G+VES+LR + +
Sbjct: 396 VTLDIEVGKVGWPVLFEKNNFFTRYKTYIQISARTEENQDEHRQWEGFVESKLRMFLQWL 455
Query: 386 ERDMGGVLQCRLYPGDFSENSVKSSSQCHYF------MGLGRKQGVSPQDGEKFDMRLTV 439
E GV YP FS+ S Q Y M +++G P+ E ++ V
Sbjct: 456 E-SAPGVDYVHPYPKTFSQTDTTESGQPVYLTIFYFGMMFKKQEGTDPRVIELGNI---V 511
Query: 440 EEFKSHVVWMYSSWKQGMQIH--VSHLRCQDIPDFVFPGGVRPPKSLNEKKRK 490
+F+ + +S+ ++ V ++ +P+ VF GGVRP + KK K
Sbjct: 512 RDFREAIKNQNASFVNNPRVDLVVLPMKRPQLPENVFEGGVRPAPTKRPKKDK 564
>gi|254578066|ref|XP_002495019.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
gi|238937909|emb|CAR26086.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
Length = 567
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 207/559 (37%), Positives = 313/559 (55%), Gaps = 49/559 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+ST+ PT + EL + L E F SE+E+ R++VL L + ++++ RV+ K +
Sbjct: 13 VSTAGPTAAENKLNDELIQELKKEGSFESEQETANRIKVLKILQELAQEFVYRVSKKKNM 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD ++A K+FTFGSYRLGV GP +DID L V P + R +DFF L +L+ P +
Sbjct: 73 SDG-MARDAGGKIFTFGSYRLGVHGPGSDIDTLVVVPKHVMR-EDFFTVLDEILRSRPEL 130
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
E++ PVPDA VP+IK KF+G+S+DL+ A+L + IP+ L +LL NLDE+ + +LNG
Sbjct: 131 EEIAPVPDAFVPIIKIKFSGISIDLICAKLDLAQIPQSLTLSDKNLLRNLDEKDLRALNG 190
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVP FR LR ++ WA RR IY+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 191 TRVTDEILELVPKPIVFRIALRAIKLWANRRAIYANVFGFPGGVAWAMLVARICQLYPNA 250
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
V+++RFFKI + WKWP PV+L PI+ + VW+P+ +DR H MP+ITP+YP
Sbjct: 251 TSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSM 310
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++N++ +T R++ +E + + +I + K+TW LF ++FF +K YL + + +
Sbjct: 311 CATHNITESTKRVILQELENGISITNDIFSNKKTWSDLFTKHNFFYKYKFYLTVMASTRG 370
Query: 364 AGDFR-QWKGWVESRLRQLIHMIERDMGGVL----------------------------- 393
+ +W G VES++R L+ +E G L
Sbjct: 371 TDEENLKWSGMVESKVRLLVLKLEALPGIKLAHPFIKPFEAAFAYSNETESKEILDNYGS 430
Query: 394 -----QCRLYPGDFSENS--VKSSSQCHY-FMGLGRKQGVSPQDGEKFDMRLTVEEFKSH 445
Q Y ENS K +C+ M +G V + EK D+ + EF +
Sbjct: 431 FKTEEQLSKYKRITEENSQDTKDEKKCYITTMYIGLDVNVE-EKKEKIDIHVPCNEF-FN 488
Query: 446 VVWMYSSWKQGMQIH---VSHLRCQDIPDFVF-PGGVRPPKSLNEKKRKRIEVIESTKLK 501
+ ++ Q I+ + +++ D+P V+ PG RP K K+RK+ + E TK
Sbjct: 489 LCRNFNEEYQNSDIYSLIIKYVKQYDLPSEVYEPGETRPVKK-KSKRRKQDKSAEFTKKA 547
Query: 502 KSE--SSTAGHSSGQKSSQ 518
KSE S T+ SS +++Q
Sbjct: 548 KSEAPSGTSQGSSIAEATQ 566
>gi|238882575|gb|EEQ46213.1| Poly(A) polymerase [Candida albicans WO-1]
Length = 558
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 176/403 (43%), Positives = 256/403 (63%), Gaps = 4/403 (0%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IST+ PT + I L + L + F SE+ + RVEVL +V++++ V+ K
Sbjct: 10 EPISTNGPTPKENILNDALIQELKNRGSFESEQATKKRVEVLTLFQRLVQEFVYTVSKSK 69
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
+SD Q+A K+FTFGSYRLGV GP +DID L V P + TR DDFF ++++ P
Sbjct: 70 NMSDS-MAQDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTR-DDFFSVFADIIRKRP 127
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
+E++ VPDA VP+IK +F+G+S+DL+ A+L +P DL +LL NLDE+ + SL
Sbjct: 128 ELEEIACVPDAYVPIIKLEFDGISIDLIMARLNIPRVPLDLTLDDKNLLKNLDEKDLRSL 187
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RVTD IL LVP F+ LRC++ WA++R +Y N GF GG+ WA+LVAR+CQLYP
Sbjct: 188 NGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNIFGFPGGVAWAMLVARICQLYP 247
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NA+ + +V +FF I+ W WP PV+L I+ + VW+PR DR H MP+ITP+YP
Sbjct: 248 NAVSSAIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYP 307
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
+++N++S+T +++ E R + +EI AGK+TW LFE + FF +K YL + A+
Sbjct: 308 SMCATHNITSSTQKVILAELSRGSSIMQEIHAGKKTWSDLFEKHSFFYKYKFYLCVVAAS 367
Query: 362 -KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFS 403
+A + ++W G++ES+LRQL+ +E GV Y DFS
Sbjct: 368 IDSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFS 409
>gi|68482706|ref|XP_714750.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
gi|3334283|sp|O42617.1|PAP_CANAL RecName: Full=Poly(A) polymerase PAPalpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|2696030|dbj|BAA23802.1| poly A polymerase [Candida albicans]
gi|5771514|gb|AAD51412.1| unknown [Candida albicans]
gi|46436342|gb|EAK95706.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
Length = 558
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 176/403 (43%), Positives = 256/403 (63%), Gaps = 4/403 (0%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IST+ PT + I L + L + F SE+ + RVEVL +V++++ V+ K
Sbjct: 10 EPISTNGPTPKENILNDALIQELKNRGSFESEQATKKRVEVLTLFQRLVQEFVYTVSKSK 69
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
+SD Q+A K+FTFGSYRLGV GP +DID L V P + TR DDFF ++++ P
Sbjct: 70 NMSDS-MAQDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTR-DDFFSVFADIIRKRP 127
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
+E++ VPDA VP+IK +F+G+S+DL+ A+L +P DL +LL NLDE+ + SL
Sbjct: 128 ELEEIACVPDAYVPIIKLEFDGISIDLIMARLNIPRVPLDLTLDDKNLLKNLDEKDLRSL 187
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RVTD IL LVP F+ LRC++ WA++R +Y N GF GG+ WA+LVAR+CQLYP
Sbjct: 188 NGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNIFGFPGGVAWAMLVARICQLYP 247
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NA+ + +V +FF I+ W WP PV+L I+ + VW+PR DR H MP+ITP+YP
Sbjct: 248 NAVSSAIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYP 307
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
+++N++S+T +++ E R + +EI AGK+TW LFE + FF +K YL + A+
Sbjct: 308 SMCATHNITSSTQKVILAELSRGSSIMQEIHAGKKTWSDLFEKHSFFYKYKFYLCVVAAS 367
Query: 362 -KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFS 403
+A + ++W G++ES+LRQL+ +E GV Y DFS
Sbjct: 368 IDSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFS 409
>gi|255713432|ref|XP_002552998.1| KLTH0D06380p [Lachancea thermotolerans]
gi|238934378|emb|CAR22560.1| KLTH0D06380p [Lachancea thermotolerans CBS 6340]
Length = 594
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 201/560 (35%), Positives = 311/560 (55%), Gaps = 48/560 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT + L + L EK F SEE++ RVEVL L + ++++ +V+ + +
Sbjct: 13 ISTAGPTAAENQLNDALIQELKKEKSFESEEDTKKRVEVLRILQNLAQEFVYQVSKKRNM 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD ++A K+FT+GSYRLGV GP +DID L V P + TR +DFF ++L+ +
Sbjct: 73 SDG-MAKDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDQILRTRSEL 130
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
E++ PVPDA VP+IK KF+G+S+DL+ A+L + +P +L +LL NLDE+ + +LNG
Sbjct: 131 EEIAPVPDAFVPIIKIKFSGISIDLICARLDIAQVPVNLTLADKNLLRNLDEKDLRALNG 190
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVP +F+ LR ++ WA+RR +Y+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 191 TRVTDEILQLVPKPTSFKIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNA 250
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
V+++RFF I W WP PV+L PI+ + VW+PR +DR H MP+ITP+YP
Sbjct: 251 CSAVILTRFFHILTKWNWPQPVLLKPIEDGPLQVRVWNPRIYAQDRSHKMPVITPAYPSM 310
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++N+S +T +++ E +R ++ EI + K+TW LF+ + FF +K YL + +
Sbjct: 311 CATHNISESTKKVILAELERGAQISSEIFSNKKTWSDLFQKHDFFYKYKFYLTVMASTSG 370
Query: 364 AGD-FRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSV-KSSSQCHYFM---G 418
+ + +W G VES+LR L+ +E +GG+ + F + V + +QC + G
Sbjct: 371 SSEQHLKWSGLVESKLRLLVQKLET-LGGINLAHPFTKPFEASYVYDNEAQCKDIIDNYG 429
Query: 419 LGRKQGVSPQDGEKFDMRLTVEEFKS----HVVWMYSSW------KQGMQIHV------- 461
+ Q + Q E D + K H+ MY K+ + IHV
Sbjct: 430 THKAQDILAQYTEVTDDNKDTDGVKDKAQVHITTMYIGLDVALDGKKQVDIHVPCSDFFN 489
Query: 462 ------------------SHLRCQDIPDFVF-PGGVRPPKSLNEKK----RKRIEVIEST 498
+++ D+PD V+ G RP K KK K+ + +S
Sbjct: 490 LCRSFSEYDDTDMFSLMIKYVKLYDLPDNVYVEGEERPVKHSKRKKLGKDSKKSKRPKSN 549
Query: 499 KLKKSESSTAGHSSGQKSSQ 518
LK E ++ +S + +SQ
Sbjct: 550 SLKAEEPTSGTTNSEKNNSQ 569
>gi|50304345|ref|XP_452122.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641254|emb|CAH02515.1| KLLA0B13255p [Kluyveromyces lactis]
Length = 598
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 197/550 (35%), Positives = 312/550 (56%), Gaps = 54/550 (9%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST PT + L + L E F +EEE+ RV VL + ++++ +V+ K +
Sbjct: 13 ISTEGPTAAENALNDSLIQQLKKEGSFETEEETGKRVAVLEIFQKLTQEFVYQVSKKKNM 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD ++A K+FTFGSYRLGV GP +DID L V P + +R +DFF +L+E P +
Sbjct: 73 SDG-MARDAGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSR-EDFFTVFDALLRERPEL 130
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
E++ VPDA VP+IK KFNG+S+DL++A+L +P L +LL N+DE+ + +LNG
Sbjct: 131 EEIASVPDAFVPIIKIKFNGISIDLIFAKLDLPQVPISLTLSDKNLLRNVDEKDLRALNG 190
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVPN +F+ LR ++ WAKRR +Y+N GF GG+ WA+ V R+CQLYPNA
Sbjct: 191 TRVTDEILELVPNKTSFKIALRAIKIWAKRRAVYANVFGFPGGVAWAMFVVRICQLYPNA 250
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
V++S+FF+I + WKWP PV+L PI+ + VW+P+ +DR H MP+ITP+YP
Sbjct: 251 CSAVIISKFFQILSRWKWPQPVLLKPIEDGPLQVRVWNPKIYAQDRSHKMPVITPAYPSM 310
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++N+S +T +++ E QR E+ ++I + + +W LF+ + FF +K YL + ++ K
Sbjct: 311 CATHNISESTKKVILSELQRGVEVTQKIFSNELSWEDLFKKHDFFFKYKFYLTVMVSTKG 370
Query: 364 AGD-FRQWKGWVESRLRQLIHMIERDMG-------------------------------- 390
+ + +W G+VES+LR L+ +E G
Sbjct: 371 SDEQHLKWSGFVESKLRLLVQKLEVLPGINLAHPFIEPYESSYIYNNEDEYKEIMNNYGT 430
Query: 391 ----GVLQ--CRLYPGDFSENSVKSSSQCH---YFMGLGRKQGVSPQDGEKFDMRLTVEE 441
GVL+ ++ + + + K+S+Q H F+GL ++ ++ +K D+ + +E
Sbjct: 431 HKTEGVLKKFTKITDANKDDEASKNSNQVHIATMFIGL----DINTEESKKIDIHIPCQE 486
Query: 442 FKSHVVWM--YSSWKQGMQIHVSHLRCQDIPDFVF-PGGVRPPKSLNEKKRKRIEVIEST 498
F + + Y + + + +++ D+PD V+ G RP KS KKRK + E +
Sbjct: 487 FFNLCRSLPDYED-PETYSLIIKYVKVHDLPDEVYQEGETRPVKS--SKKRKPEKSGEKS 543
Query: 499 KLKKSESSTA 508
K KS+ S
Sbjct: 544 KRPKSDPSNG 553
>gi|401409652|ref|XP_003884274.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
gi|325118692|emb|CBZ54243.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
Length = 701
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 199/501 (39%), Positives = 293/501 (58%), Gaps = 41/501 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
++ P D+ + EL +L L+ + +L R VL L+ IV +W+ V M++G+
Sbjct: 122 VNMKLPQDADIHRSNELISVLRALNLYETAAGNLLRERVLNELNRIVVEWVVEVGMEQGL 181
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
DE++ ++A K+FTFGSYRLGV P +DID LCV P + TR + FF L LQ+ V
Sbjct: 182 -DEQEARQAGGKIFTFGSYRLGVTTPGSDIDTLCVTPRHVTR-EAFFKILHAKLQQDARV 239
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQ-DSLLHNLDEQTVLSLN 182
LTPVPDA PV+KF F+GV +DLL+A+L VIP +SL+ D +L ++DE+T S+N
Sbjct: 240 SKLTPVPDAYTPVLKFNFDGVEIDLLFARLPLPVIPSSWNSLENDFVLRHVDEKTARSVN 299
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
G RV D +L LVPN F+ TLR ++ WAK RGIYSN +G+LGGI+WA+LVAR CQLYPN
Sbjct: 300 GSRVADLVLKLVPNKETFKVTLRFVKHWAKVRGIYSNVLGYLGGISWAILVARCCQLYPN 359
Query: 243 ALPNVLVSRFFKIFAHWKWPN-PVMLCPIQYQAMP----HHVWDPRSNQRDRKHLMPIIT 297
P+ L+ RFF +++ WKW N PV+LC I+ + +W+P+ N +DR HL+PIIT
Sbjct: 360 FAPSQLIHRFFTVYSIWKWKNSPVLLCKIKEHTVEGLSNFKIWNPKVNVQDRHHLLPIIT 419
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHF------FGSF 351
P++P NS++NVS +T R++ +EF AK + + + K+ I+ E H F SF
Sbjct: 420 PAFPSMNSTHNVSLSTKRVITDEFANAKRIFDVWD--KKKEISWTEALHLVLKPLDFTSF 477
Query: 352 KNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIER-------DMGG-------VLQCRL 397
K++L++ I A+N R+W GWVES++R L+ +ER GG + R
Sbjct: 478 KHFLELQIFAQNETVHRKWLGWVESKVRFLVRQLERLAACPPFAAGGHTPKSEAAMTVRP 537
Query: 398 YPGDFS--ENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHV-VWMYSSWK 454
P FS E + +S + ++ V D+R EF + W +
Sbjct: 538 IPCTFSFQEPGWEYASSMLVALNFAQQPCV-------IDLRPAAGEFVDLINQWPERAQL 590
Query: 455 QG-MQIHVSHLRCQDIPDFVF 474
+G +Q+ V H+R +P +V
Sbjct: 591 EGQIQLRVKHVRRSQLPAYVL 611
>gi|302696569|ref|XP_003037963.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
gi|300111660|gb|EFJ03061.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
Length = 649
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 207/560 (36%), Positives = 307/560 (54%), Gaps = 51/560 (9%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS S PT + +T + + L + +F S E+S R L R+ + K ++++VT+ +G+
Sbjct: 16 ISVSPPTEAEEAATVAMMEELHRQGVFESAEDSKRRELALDRISALTKKFVQKVTIARGL 75
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E + A K++TFGSYRLGV P +DID LCV P + +R +DFF ML+E+P V
Sbjct: 76 S-EVTARNAGGKVYTFGSYRLGVHTPESDIDTLCVVPKHVSR-EDFFDVFEPMLRESPDV 133
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDS-LLHNLDEQTVLSLN 182
++ +P+A VP+IK K G+ +D+L A+L S IPEDL SLQDS +L NLD++ V SLN
Sbjct: 134 TEVAGIPEAYVPIIKIKMFGIPIDILMARLALSSIPEDL-SLQDSNILRNLDDRCVRSLN 192
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
G RVTD +L LVPN+ FR LRC++ WA+R+ IYSN GF GG+ WA+LVARVCQLYPN
Sbjct: 193 GYRVTDELLRLVPNVDVFRDALRCIKLWAQRKAIYSNVNGFPGGVAWAMLVARVCQLYPN 252
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
A +V RFF I W WP PV+L + M W+P+ DR H MP+ITP YP
Sbjct: 253 ANAGTVVGRFFPIMHQWPWPAPVILKHVDDLQMGQRSWNPKLFPGDRAHRMPVITPVYPA 312
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK 362
+++NVS +T I++EE +R +L I G W LFE + FF ++ +LQI +
Sbjct: 313 MCATHNVSVSTFAIIEEELRRGTKLMNSIILGSSKWSELFEKHDFFHKYRYFLQIIASTA 372
Query: 363 NAGDFRQWKGWVESRLRQLI------------HMIERDMGGVLQC--------------- 395
+A W VE+++RQL+ H + V C
Sbjct: 373 SAEAQLMWAPNVEAKIRQLVSKLELVESLTLAHPFTKGFEQVFYCMNDDEIRSVAQGEVP 432
Query: 396 ----RLYPGDFSENSVKSSSQCH---YFMGLG-RKQGVSPQDGEKFDMRLTVEEFKSHVV 447
R P D V+S S+ + +++GL + V + D+ EF + V
Sbjct: 433 DVIARRRPQDI--EGVESGSKVYSTTFYIGLAIEPRPVGAIGTRRLDISYPTTEF-TKVA 489
Query: 448 WMYSSWKQG-MQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKSESS 506
M+ + + M + V H++ +PD+VF G R P+S +KR++V S + ++
Sbjct: 490 KMWERFDEATMGLVVRHIKSSALPDYVFEPGERQPRS----AQKRVKVRSSYPVNENSYP 545
Query: 507 TAGH----SSGQKSSQTESG 522
T G ++G++S +G
Sbjct: 546 TNGELSYATNGERSYTNGNG 565
>gi|1709571|sp|P51004.1|PAPO1_XENLA RecName: Full=Poly(A) polymerase alpha-A; Short=PAP-alpha-A;
AltName: Full=Polynucleotide adenylyltransferase alpha-A
gi|643644|gb|AAC59745.1| poly(A) polymerase type 1, partial [Xenopus laevis]
Length = 715
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 192/440 (43%), Positives = 271/440 (61%), Gaps = 11/440 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +A D ++L + L +F EE+ R+ LG+L+ +VK+WI+ ++ K +
Sbjct: 10 ISLAAAKDTDCTLMQKLIETLKPYGVFEEEEQLQHRI--LGKLNNLVKEWIREISELKHL 67
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFG YRLGV DIDALCV P + R DFF + L++ V
Sbjct: 68 P-QSVIENVGGKIFTFGPYRLGVHTKGADIDALCVAPRHVDR-SDFFSSFYDKLKQQEEV 125
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 126 KDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 185
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI +FR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 186 CRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 245
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 246 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 305
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T +M EEF++ + +EI GK W LF+ +FF +K+Y+ + +A
Sbjct: 306 NSTYNVSVSTRAVMIEEFKQGLAITDEILLGKAEWSKLFDAPNFFQKYKHYILLLASAPT 365
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F SEN K + + +GL
Sbjct: 366 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPRSFPAPSENMEKEEFRTMWVIGLV 424
Query: 421 RKQGVSPQDGEKFDMRLTVE 440
K+ ++ E + LT +
Sbjct: 425 FKKM---ENSENLSVDLTYD 441
>gi|255085208|ref|XP_002505035.1| predicted protein [Micromonas sp. RCC299]
gi|226520304|gb|ACO66293.1| predicted protein [Micromonas sp. RCC299]
Length = 404
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/384 (45%), Positives = 248/384 (64%), Gaps = 12/384 (3%)
Query: 12 LDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQE 71
+D+ + +LE L E +F + EE R EVLG ++ ++ W + + KGI E+ +
Sbjct: 1 MDLKLSADLEARLHLENVFEAPEECTRREEVLGEINEALQQWCRARSASKGI---EEDLD 57
Query: 72 ANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGK--------LFRMLQETPLV 123
L+TFGSYRLGV GP+ DID LC+GP + TR +DFFG + ++ P
Sbjct: 58 PRCNLYTFGSYRLGVHGPAADIDTLCIGPRHLTRAEDFFGSEWTGYEGSFYLEMKNHPGT 117
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDLDSLQDSLLHNLDEQTVLSLN 182
+ + VPDA VP +K F G +D+ Y + + +PEDLD Q ++L NLD+ +V SLN
Sbjct: 118 DQVVAVPDAVVPELKLVFRGFEIDIAYVCMGSYVSVPEDLDVCQTTILQNLDDASVKSLN 177
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
GCRV D++L LVPN FR LR LR WAK RG+YSN +G+ GG+N ALLVARVCQLYPN
Sbjct: 178 GCRVADQLLRLVPNHDAFRIALRALRVWAKERGVYSNVLGYFGGVNLALLVARVCQLYPN 237
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
A P++LV FF+++ W+W PVML PI + VWD R N+ +R LM IITP+YP
Sbjct: 238 AAPSMLVYSFFQLWDAWQWSTPVMLTPIVDEGHGLRVWDERVNKAERFQLMKIITPAYPA 297
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK 362
NS++NV+ +TL +++ EF+R +E+C E+ K+ W +L+EP FF K+YLQ+ IAA
Sbjct: 298 QNSTFNVTHSTLHVLKNEFKRGREVCAEVLMSKKRWESLWEPLPFFTMHKHYLQVTIAAV 357
Query: 363 NAGDFRQWKGWVESRLRQLIHMIE 386
+ DF++W+GWV SRLR L+ +E
Sbjct: 358 SEDDFKKWEGWVHSRLRMLVQGVE 381
>gi|384494476|gb|EIE84967.1| hypothetical protein RO3G_09677 [Rhizopus delemar RA 99-880]
Length = 408
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 175/384 (45%), Positives = 240/384 (62%), Gaps = 6/384 (1%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E +S P D+ T EL+K LV L+ S+E + R VL LD + K +++ V +
Sbjct: 15 EPLSLEKPKEHDIKLTDELQKTLVQYGLYDSKERAKQREYVLKSLDKMTKKFVQIVYERQ 74
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G S +E IQ A K+ T+GSYRLG DID LCV P Y +R D FF + +L+
Sbjct: 75 GFSKQEAIQ-AGGKVLTYGSYRLGANAADADIDTLCVFPKYVSRKD-FFTIMLSLLRSNE 132
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
++D+TPV D+ VPVIKFK+N + +D + A+L +PED+D +L LDE ++ SL
Sbjct: 133 QIKDITPVTDSYVPVIKFKYNDIPIDFVCARLTVDQVPEDIDLSDPKILWGLDEYSIRSL 192
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RV D IL LVPNI FR+ LRC++ WA R+ IYSN +GFLGG+ WA+LVARVCQLYP
Sbjct: 193 NGARVADDILRLVPNIETFRTALRCIKLWATRKAIYSNILGFLGGVAWAILVARVCQLYP 252
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHV---WDPRSNQRDRKHLMPIITP 298
+A + +V FF+I HW WP+PVML ++ P W+P+ N DR H MPIITP
Sbjct: 253 HASASTVVYHFFQILVHWSWPSPVMLKAVE-DGPPLAATRPWNPKLNPTDRSHRMPIITP 311
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIH 358
SYP S++NV +T RI+ E ++A E+ ++I G TW LF+ ++FF + YLQI
Sbjct: 312 SYPSMCSTHNVIPSTQRIIMGEIKQAAEIVQKIRTGSATWARLFQSHNFFEIYMQYLQIT 371
Query: 359 IAAKNAGDFRQWKGWVESRLRQLI 382
+ A N +W G VE+RLRQL+
Sbjct: 372 VVADNYNLQLKWAGLVEARLRQLL 395
>gi|399218218|emb|CCF75105.1| unnamed protein product [Babesia microti strain RI]
Length = 501
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 189/497 (38%), Positives = 295/497 (59%), Gaps = 23/497 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
I+ PT D+ + ++L +L LF +E+ R +L L+ ++ ++I V + +G+
Sbjct: 20 ITLDGPTPEDIEANEQLLTLLRSLNLFETEKGLRKRELILASLNRLLHNFIHSVCIMQGL 79
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
DE+ + +A+L TFGSYRLGV GP +DIDALC+ P TR +DFF + +L P V
Sbjct: 80 -DEDDANDVSARLLTFGSYRLGVIGPDSDIDALCLCPQRITR-NDFFTVFYDILANHPNV 137
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ V DA P+IK ++ + +D+L+A L I +L L D +L NLD+ T S+NG
Sbjct: 138 SKIHAVADAYTPLIKLVYDDIDIDILFAILPIPTISPNLSILDDDILRNLDDITARSING 197
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV +LS VPN NFR+TLR ++ WA++RGIYSN +G+LGG+ WA+L ARVCQLYPN
Sbjct: 198 CRVASLVLSSVPNEHNFRNTLRFIKLWAQKRGIYSNILGYLGGVAWAILTARVCQLYPNY 257
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA-----MPHHVWDPRSNQRDRKHLMPIITP 298
LPN ++ +FFK++ W W PV++ I+ M VWDP++N +DR HLMPIITP
Sbjct: 258 LPNQIIHKFFKVYMLWNWKYPVVINKIKQPVNVPGLMMFKVWDPKTNPQDRLHLMPIITP 317
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIH 358
++P NS++NV++TT R+M EF+RA EL + + TW L EP + F FK++L I
Sbjct: 318 AFPAMNSTHNVTNTTKRVMINEFKRAHELLK--TQSQMTWNDLLEPANIFNEFKHFLVII 375
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMG 418
+ A + +W GW+ESR+R LI +E + R +P + ++ F+G
Sbjct: 376 VVASDEKAHSKWHGWIESRIRFLIRKLEAIEHT--ELRPWPHSITMEDPDWTNSKWIFIG 433
Query: 419 LGRKQGVSPQDGEKFDMRLTVEEFKSHVV-WM-YSSWKQGMQIHVSHLRCQDIPDFVFPG 476
L + Q FD+R ++EFK+ + W +S++ + + + +++ +P+
Sbjct: 434 LSYNKTEESQ----FDIRTPIKEFKNLIFSWQELTSYESKVDVRIEYMKKSQLPE----- 484
Query: 477 GVRPPKSLNEKKRKRIE 493
+ KSL +++RK I+
Sbjct: 485 SINGSKSL-KRRRKVID 500
>gi|239835858|gb|ACS29269.1| pap1 [Meyerozyma guilliermondii]
Length = 564
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 198/554 (35%), Positives = 301/554 (54%), Gaps = 56/554 (10%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT + L L F SE+ + RVE+L L +V++++ V+ K +
Sbjct: 12 ISTANPTPKENALNDSLIAELKARGSFESEQATRKRVEILALLQKMVQEFVYTVSKKKNM 71
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD ++A K+FTFGSYRLGV GP +DID L V P + R +DFF +M+++ P +
Sbjct: 72 SDG-MAKDAGGKIFTFGSYRLGVYGPGSDIDTLIVVPKHVVR-EDFFTIFDQMIRQRPEL 129
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
E++T VPDA VP+I +F+G+S+DL++A+L S +P D+ ++LL N+DE + +LNG
Sbjct: 130 EEITAVPDAFVPIIMIEFSGISIDLIFARLNVSRVPLDMTLEDNNLLKNIDENDMRALNG 189
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD+IL LVP + F+ LRC++ WA++R +Y N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 190 TRVTDQILQLVPKVTVFKHALRCIKLWAQQRAVYGNMFGFPGGVAWAMLVARICQLYPNA 249
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ V+V +FF I+ W WP PV+L PI+ + VW+PR DR+H MP+ITP+YP
Sbjct: 250 VSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRQHKMPVITPAYPSM 309
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++N++S+T +++ E +R EL +I +TW LF+ + FF +K YL I A +
Sbjct: 310 CATHNINSSTQKVIMNELERGSELMAQISLNNKTWADLFQRHDFFHRYKFYLCIIAATEG 369
Query: 364 AG-DFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSEN----------------- 405
+ +W G VES+LR LI +E G+ Y DFS++
Sbjct: 370 TNEEHSKWSGMVESKLRILIQKLEL-TDGIALAHPYVKDFSDSYLIQEIPKDDILAAYGT 428
Query: 406 -----------------------------SVKSSSQCHYFMGLGRKQGVSPQD---GEKF 433
+K F+GL G S +K
Sbjct: 429 LKGETLLNKLKHVEKTDVNKDTQKDDQKEDLKQYHLTKLFVGLDIDIGKSSGHTGGTKKL 488
Query: 434 DMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIP-DFVFPGGVRPPKSLNEKKRKRI 492
D++ EF + +S + QI + +++ D+P D G RP K+ KKRK+
Sbjct: 489 DIQYPCSEFYNLCKGWHSYNESIHQIFIKNVKLNDLPSDVYIEGEARPTKA--GKKRKKE 546
Query: 493 EVIESTKLKKSESS 506
+E+ K KS +S
Sbjct: 547 SNLETQKRPKSVAS 560
>gi|37595378|gb|AAQ94575.1| polyA polymerase alpha [Danio rerio]
Length = 386
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 176/352 (50%), Positives = 227/352 (64%), Gaps = 2/352 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D++ T++L + L +F E E R+ VLG+L+ +VK WI+ V+ K I
Sbjct: 25 ISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIREVSEAKNI 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
I K+FTFGSYRLGV DIDALCV P + R DFF + L+E V
Sbjct: 85 P-ASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-TDFFSSFYEKLKEQEEV 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPE+LD D LL NLD + + SLNG
Sbjct: 143 KDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR DR HLMPIITP+YP
Sbjct: 263 VAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYL 355
NS+YNVS++T IM EEF+R + +EI K W LFE +FF +K L
Sbjct: 323 NSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKYKYVL 374
>gi|50925416|gb|AAH79525.1| Papolb protein [Danio rerio]
Length = 435
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 176/352 (50%), Positives = 227/352 (64%), Gaps = 2/352 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D++ T++L + L +F E E R+ VLG+L+ +VK WI+ V+ K I
Sbjct: 25 ISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIREVSEAKNI 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
I K+FTFGSYRLGV DIDALCV P + R DFF + L+E V
Sbjct: 85 P-ASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-TDFFSSFYEKLKEQEEV 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPE+LD D LL NLD + + SLNG
Sbjct: 143 KDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR DR HLMPIITP+YP
Sbjct: 263 VAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYL 355
NS+YNVS++T IM EEF+R + +EI K W LFE +FF +K L
Sbjct: 323 NSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKYKYVL 374
>gi|38541302|gb|AAH62850.1| Papolb protein [Danio rerio]
Length = 436
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 176/352 (50%), Positives = 227/352 (64%), Gaps = 2/352 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D++ T++L + L +F E E R+ VLG+L+ +VK WI+ V+ K I
Sbjct: 25 ISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIREVSEAKNI 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
I K+FTFGSYRLGV DIDALCV P + R DFF + L+E V
Sbjct: 85 P-ASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-TDFFSSFYEKLKEQEEV 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPE+LD D LL NLD + + SLNG
Sbjct: 143 KDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR DR HLMPIITP+YP
Sbjct: 263 VAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYL 355
NS+YNVS++T IM EEF+R + +EI K W LFE +FF +K L
Sbjct: 323 NSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKYKYVL 374
>gi|313243939|emb|CBY14824.1| unnamed protein product [Oikopleura dioica]
Length = 630
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 200/582 (34%), Positives = 322/582 (55%), Gaps = 31/582 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S PT D + T++L+K + F + + R++VL +L+ +VKD++++V + +
Sbjct: 8 LSVEGPTEKDKVMTEDLQKTIEPYGAFDTPDGLSHRIQVLTKLNELVKDFVRKVAKECRL 67
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E E K++TFGSYRLGV DID LCV P + TRH FF ML++T V
Sbjct: 68 P-EHLHGELGGKIYTFGSYRLGVHTSDGDIDTLCVVPQHVTRHH-FFTIFLDMLKKTEGV 125
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDLDSLQDSLLHNLDEQTVLSLN 182
+ + +A VP+IK F+G+ +D+L+A+L S +PED D +L NL+E+ V SLN
Sbjct: 126 TECRDIREAFVPLIKLYFDGIDMDILFARLANNSKVPEDQDLRNIEILRNLEEKCVRSLN 185
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
GCRVTD IL LVPNI FR TLR ++ WA+R+GIY NA+GF+GG+ WA+LVAR CQLYPN
Sbjct: 186 GCRVTDEILHLVPNIETFRLTLRAVKLWARRKGIYKNALGFIGGVCWAMLVARTCQLYPN 245
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMP---HHVWDPRSNQRDRKHLMPIITPS 299
A P+ L+ +FF +F+ W WP PV L + A P H VWDPR N DR HLMPIITP+
Sbjct: 246 AAPSTLLEKFFLLFSKWDWPKPVFL-KVPEDAPPGFTHPVWDPRFNPLDRSHLMPIITPA 304
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEI--------EAGKRTWITLFEPYHFFGSF 351
YP NS++NVS +TL +M++E + A E ++I E R W LF FF +
Sbjct: 305 YPHQNSTFNVSRSTLSVMKQEIKDAYETTKQILQKTPNPDEPNTRLWADLFTRTDFFNKY 364
Query: 352 KNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERD---MGGVLQCRLYPGDFSENSVK 408
K+++ + A +++W G VES +R+L++ +ER+ + + D +E
Sbjct: 365 KHFIVLSATADQQEQYQKWIGLVESNIRKLVNDLERNEYILIAHVNVDSIELDPAEEGQS 424
Query: 409 SSSQCHYFMGLG-RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQ 467
C +F+GL + V P D++ + + ++++ M++ +++
Sbjct: 425 PRYVCRWFLGLSFHRCEVKPNINLTSDIQRFTDLLHQAAI-SHNNYTPDMRVEARYVKRH 483
Query: 468 DIPDFVFPGGVRPPKSLNEKKRKRIEVIESTK----LKKSESSTAGHSSGQKSSQT---- 519
++ F+ P R K K+ ++ + + KK+E S + +S +++ +
Sbjct: 484 NLVKFLTPELARTLKLSKSKEGRKSKTNAQNQSNGNTKKAEESESKNSQSKENKEKLETH 543
Query: 520 ESGVALDGSHGLKS---GPSVEPSTSSVSSSTSASSRPQRPA 558
+S + + + + G E S + ++A ++ ++PA
Sbjct: 544 QSSITMAKDIAITTNFDGQRTERSVKNSEEESAAETKSEKPA 585
>gi|159154998|gb|AAI54504.1| Papolb protein [Danio rerio]
Length = 436
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 176/352 (50%), Positives = 227/352 (64%), Gaps = 2/352 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D++ T++L + L +F E E R+ VLG+L+ +VK WI+ V+ K I
Sbjct: 25 ISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIREVSEAKNI 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
I K+FTFGSYRLGV DIDALCV P + R DFF + L+E V
Sbjct: 85 P-ASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-TDFFSSFYEKLKEQEEV 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPE+LD D LL NLD + + SLNG
Sbjct: 143 KDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR DR HLMPIITP+YP
Sbjct: 263 VAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQ 322
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYL 355
NS+YNVS++T IM EEF+R + +EI K W LFE +FF +K L
Sbjct: 323 NSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKYKYVL 374
>gi|50557132|ref|XP_505974.1| YALI0F28039p [Yarrowia lipolytica]
gi|49651844|emb|CAG78786.1| YALI0F28039p [Yarrowia lipolytica CLIB122]
Length = 518
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 168/386 (43%), Positives = 252/386 (65%), Gaps = 3/386 (0%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IST+ PT ++ EL + L + F SE ES R +VL + + ++++++V++ K
Sbjct: 9 EPISTAPPTPEEIALNGELIEELKRQGSFESEAESNKRKKVLLIMQQLAQEYVRQVSLKK 68
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
SD ++A K+FTFGSY LGV GP +DID L V P + TR +DFF R+L+E P
Sbjct: 69 NFSDG-MARDAGGKIFTFGSYSLGVHGPGSDIDTLIVVPKHVTR-EDFFEVFERLLRERP 126
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
+E+++ VPDA VP+IK KF G+S+DL+ A+L +P DL D+LL N+D++ + +L
Sbjct: 127 ELEEISAVPDAFVPIIKVKFMGISIDLISARLDIPKVPLDLTLEDDNLLRNVDDKDLRAL 186
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RVTD IL LVPN F+ LR ++ WA+ R +Y N MGF GG+ W +LVARVCQLYP
Sbjct: 187 NGTRVTDDILRLVPNKTVFKHALRVIKIWAQNRAVYGNIMGFPGGVQWGILVARVCQLYP 246
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NA+ V++SRFF + W+WP PV+L I+ + VW+PR +D+ H MPIITP+YP
Sbjct: 247 NAVAAVILSRFFNVLLRWRWPQPVLLKKIEDGPLQARVWNPRIYSQDKLHRMPIITPAYP 306
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
+++N++++T +++ E +R ++ EI G++ W LFE +HFF +K YL I A+
Sbjct: 307 SMCATHNITASTQKVILRELERGGQILNEIMLGQKPWSALFEKHHFFSDYKYYLSIVAAS 366
Query: 362 KNAGDFR-QWKGWVESRLRQLIHMIE 386
K + + +W G+VES+LR L+ +E
Sbjct: 367 KGTAEQQLKWSGFVESKLRHLVQKLE 392
>gi|401825414|ref|XP_003886802.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
gi|392997958|gb|AFM97821.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
Length = 506
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 187/498 (37%), Positives = 295/498 (59%), Gaps = 15/498 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S T D+ ++E++ L + F +E R VLG+L+ +VK+++ R+ +KG
Sbjct: 16 LSMKESTEEDIRLSEEMDTYLQERGFFEDCKEGQTRERVLGKLNFMVKEFVARMAKNKGN 75
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
D E+ K+FTFGSYRLGV G TDIDALC+ P + TR DFF + L+E P +
Sbjct: 76 GDGEKAY--GGKIFTFGSYRLGVHGKGTDIDALCIVPRHVTR-SDFFTYFYEELKEDPNI 132
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
E +T + DA VP+IKF+F G+ +DL++A+L V+ + ++ L D+LL ++DE+ +LSLNG
Sbjct: 133 EGVTKIEDAFVPIIKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLKSMDEKCILSLNG 192
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD +L+LVPN++ F S LRC+++WAKRR +Y N G+ GG+ ++L VARVCQLYPNA
Sbjct: 193 SRVTDEMLNLVPNVKAFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLCVARVCQLYPNA 252
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+V +FF++F+ WKWP PV+L P+ VWDP+ D+ H MP+ITP+YP
Sbjct: 253 SSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAYPSM 312
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++NVS++T ++ EF RA E+ E K + +FE FF +K ++++ + +
Sbjct: 313 CATHNVSNSTQHVITMEFSRAHEILSNPE--KNDFRRIFELSDFFSRYKLFVEVLAMSTS 370
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF--SENSVK----SSSQCHYFM 417
F +W+G+VES++R L E + +L +P F E S++ +S+
Sbjct: 371 EEGFAKWEGYVESKIRILASKFEA-VDDILYAIPFPKAFRVGEESIRKIRPGASEVKKCT 429
Query: 418 GLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDF--VFP 475
+ P G+K + V+EF + Y + M+I V+ L+ +DI F VF
Sbjct: 430 AFFIAIDIIPVKGKKVVVEQQVKEF-MEFIKEYEGKESSMRIEVNSLKKKDIQGFLRVFY 488
Query: 476 GGVRPPKSLNEKKRKRIE 493
G S +E KR++++
Sbjct: 489 GKDDNLSSEDENKRRKVK 506
>gi|10835833|pdb|1F5A|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 513
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 194/440 (44%), Positives = 270/440 (61%), Gaps = 9/440 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAXLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HL PIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLXPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS +T + EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 324 NSTYNVSVSTRXVXVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPT 383
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +E++ L + P F EN K + + +GL
Sbjct: 384 EKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTXWVIGLV 442
Query: 421 RKQGVSPQDGEKFDMRLTVE 440
K+ ++ E + LT +
Sbjct: 443 FKKT---ENSENLSVDLTYD 459
>gi|353242336|emb|CCA73989.1| probable PAP1-poly(A) polymerase [Piriformospora indica DSM 11827]
Length = 624
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 200/505 (39%), Positives = 275/505 (54%), Gaps = 45/505 (8%)
Query: 30 FASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGP 89
F S EE R VLGR+ +VK++I + + + +S E + A K++TFGSYRLGV GP
Sbjct: 40 FESAEEGRTREAVLGRVTKLVKEFIYQACIRRNLS-EAAAKAAGGKIYTFGSYRLGVHGP 98
Query: 90 STDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLL 149
+DID L V P + R D F +LQ+ VE+ PVPDA VPVI K G+S+D
Sbjct: 99 GSDIDTLVVAPKHVDRQD-FMEIFLDLLQKDDWVEEANPVPDAYVPVIDAKIKGISMDFT 157
Query: 150 YAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRF 209
+A+L SVIP+DL+ DSLL NLD++ V SLNG R TD IL LVPN+ FR LR +++
Sbjct: 158 FARLALSVIPDDLELGDDSLLKNLDDKCVRSLNGSRSTDAILRLVPNVHVFRDALRAIKY 217
Query: 210 WAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCP 269
WA+RR IYSN GFLGGI WALLVARVCQLYPN +V RFF I + WKWP PV+L
Sbjct: 218 WAQRRAIYSNVSGFLGGIAWALLVARVCQLYPNGNAATIVRRFFLIMSMWKWPQPVVLKK 277
Query: 270 IQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCE 329
I+ + VW+P+ DR H MPIITP+YP S++NV + T I+QEE +R +EL
Sbjct: 278 IEEGNLNMRVWNPKIYPSDRAHKMPIITPAYPSMCSTHNVMNCTFEIIQEELKRGQELIV 337
Query: 330 EIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDM 389
I G+ W LF + FF ++ YLQI + + ++W VES+ RQL+ +E +
Sbjct: 338 RITNGEAKWADLFTKHTFFSQYQYYLQIIASCDDEEIQKKWSKTVESKGRQLVGKLE-ES 396
Query: 390 GGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR-------------KQ------------- 423
G + + + F++ + Q H + LG KQ
Sbjct: 397 GTLARVHPFVKGFNKTYYTVTMQEHADIVLGNVPPAVANRTEEEAKQIESNERQVIHTTT 456
Query: 424 ------------GVSPQDGEKFDMRLTVEEF-KSHVVW-MYSSWKQGMQIHVSHLRCQDI 469
V+ K D+ + EF K+ W +Y + M I V H++ +
Sbjct: 457 FYIGMEITRPPPSVTTTGPRKLDISIPTSEFMKTARSWELYQN--DIMGIAVRHIKNSAL 514
Query: 470 PDFVFPGGVRPPKSLNEKKRKRIEV 494
PD VF G RP K L + ++ +
Sbjct: 515 PDEVFEGAPRPRKGLKRVAKSKVPI 539
>gi|396080920|gb|AFN82540.1| poly (A) polymerase type 1 [Encephalitozoon romaleae SJ-2008]
Length = 505
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 189/499 (37%), Positives = 294/499 (58%), Gaps = 23/499 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S T DV ++E++ L + F +EE R VLG+L+ +VK+++ R+ +KG
Sbjct: 16 LSMKESTEEDVKLSEEMDMYLQERGFFEDDEEGQTRERVLGKLNFMVKEFVARMAKNKGN 75
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
D E+ K+FTFGSYRLGV G TDIDALC+ P + TR +DFF + L+ P +
Sbjct: 76 GDGEKAY--GGKIFTFGSYRLGVHGKGTDIDALCIVPRHVTR-NDFFTYFYEELKGDPNI 132
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ +T + DA VP+IKF+F G+ +DL++A+L V+ + ++ L D+LL ++DE+ +LSLNG
Sbjct: 133 KGVTKIEDAFVPIIKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLKSMDEKCILSLNG 192
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD +L+LVPN++ F S LRC+++WAKRR +Y N G+ GG+ ++L VARVCQLYPNA
Sbjct: 193 SRVTDEMLNLVPNVKAFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLCVARVCQLYPNA 252
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+V +FF++F+ WKWP PV+L P+ VWDP+ D+ H MP+ITP+YP
Sbjct: 253 SSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAYPSM 312
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++NVS++T ++ EF RA E+ +E K + +FE FFG +K ++++ +
Sbjct: 313 CATHNVSNSTQHVITMEFSRAHEILSNLE--KNDFRRIFELSDFFGRYKLFVEVLAMSTL 370
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF-----SENSVKSSSQ-----C 413
F +W+G+VESR+R L E + +L +P F S +K ++
Sbjct: 371 EEGFTKWEGYVESRIRILASKFEA-VDDILYAIPFPKAFRVLEESIGKIKPGAEEVKRCT 429
Query: 414 HYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDF- 472
+F+ + V P G+K + V+EF V Y + M I ++ L+ +D+ F
Sbjct: 430 AFFIAI----DVIPVKGKKVVVEQQVKEF-MEFVKEYEGKESNMWIEINSLKRKDVQGFL 484
Query: 473 -VFPGGVRPPKSLNEKKRK 490
VF G K K+RK
Sbjct: 485 RVFYGKENLSKEDENKRRK 503
>gi|126139251|ref|XP_001386148.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
gi|126093430|gb|ABN68119.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
Length = 556
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 200/543 (36%), Positives = 306/543 (56%), Gaps = 46/543 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT + L L F SE+ + RVEVL + +V++++ V+ K +
Sbjct: 12 ISTANPTPKENSLNDALIGELRSRGSFESEQATKKRVEVLTQFQKMVQEFVFTVSKKKNM 71
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD ++A K+FTFGSYRLGV GP +D+D L V P + +R +DFF ++++ P +
Sbjct: 72 SDG-MAKDAGGKVFTFGSYRLGVYGPGSDLDTLVVVPQHVSR-EDFFTVFAEIIRKRPEL 129
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
E++ PVPDA VP+IK +++GV +DL++A L IP D+ +LL NLDE+ + SLNG
Sbjct: 130 EEIVPVPDAFVPIIKIEYDGVPLDLIFACLNVPRIPLDMTLDDKNLLRNLDERDLRSLNG 189
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVP F+ LRC++ WA+++ +Y N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 190 TRVTDEILQLVPKPTVFKHALRCIKMWAQQKAVYGNVFGFPGGVAWAMLVARICQLYPNA 249
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ V+V +FF I+ W WP PV+L PI+ + VW+PR DR H MP+ITP+YP
Sbjct: 250 VSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYANDRLHRMPVITPAYPSM 309
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++N++S+T +++ E ++ E+ +I GK++W LF+ + FF +K YL + +AA
Sbjct: 310 CATHNITSSTQKVILSELEKGAEVVRQINLGKKSWSDLFDRHDFFHHYKFYLCV-VAATV 368
Query: 364 AGD--FRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSV-------------- 407
A D +W G +ES+LR L+ +E GV Y DFS++ V
Sbjct: 369 ASDEEHLKWTGLIESKLRHLVLKLEV-TEGVELAHPYVKDFSDSYVLGDANPSDVIGAYG 427
Query: 408 ------------------KSSSQCH---YFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHV 446
K Q H F+GL +Q S +K +++ EF ++
Sbjct: 428 TLSGQPFLDTLAKSDDSNKGEKQIHLTKLFVGLNLQQLKSVDGVKKLNIQYPCSEF-YNI 486
Query: 447 VWMYSSWKQGM-QIHVSHLRCQDIPDFVF-PGGVRPPKSLNEKKRKRIEVIESTKLKKSE 504
+ + + I++ +++ D+PD V+ G VRP K N KKRK+ ++ K KS
Sbjct: 487 CKGSGFYDEAINHINIKNVKLVDLPDDVYVEGEVRPTK--NSKKRKKEVSLDKQKRPKST 544
Query: 505 SST 507
ST
Sbjct: 545 IST 547
>gi|402226328|gb|EJU06388.1| polymerase [Dacryopinax sp. DJM-731 SS1]
Length = 620
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 214/586 (36%), Positives = 322/586 (54%), Gaps = 42/586 (7%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P ++ +T+ L + L + F SEEE R +VLGR+ G+VK ++++V++ G
Sbjct: 15 ISWNPPQEKEIKATERLMEELHHQGSFESEEEGRLREQVLGRIAGLVKQFVEKVSVSFGF 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S EE + A AK+FT GSYRLGV GP +DID +CV P + +R + FF ML V
Sbjct: 75 S-EEAAKAAGAKIFTSGSYRLGVHGPGSDIDTICVVPKHVSR-EHFFTVFEPMLLNMEGV 132
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+++ VP+A VPVIK +G+ VD L+A+L + IP+DL+ D+LL NLDE+ V SL G
Sbjct: 133 TEVSGVPEAFVPVIKAIVSGIHVDFLFARLNLTQIPDDLELKDDNLLRNLDERDVRSLGG 192
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVP FR LR ++ WA+RR IYSN +GFLGG+ WA+LVAR+CQL+P
Sbjct: 193 SRVTDEILRLVPQPVVFRDALRAVKLWAQRRAIYSNVIGFLGGVAWAMLVARICQLFPKY 252
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
++SRFF I W WP P++L I+ + VW+P+ DR HLMPIITP+YP
Sbjct: 253 DAASILSRFFHIIGQWAWPQPILLKAIEDGPLNVRVWNPQIYPSDRTHLMPIITPAYPSM 312
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++NV+ +T++IMQ E +R ++ E+I W LFE + FF ++ YLQI I + N
Sbjct: 313 CATHNVTHSTMKIMQNELRRGSQIVEKIIQAGEPWANLFEKHDFFHMYRYYLQIIITSGN 372
Query: 364 AGDFRQWKGWVESRLRQLI------------HMIERDMGGVLQC-------RLYPGDFSE 404
+ +W G VES++R L+ H + + V+ C + + +
Sbjct: 373 QEMYHKWAGTVESKIRLLVGKLELQEAVEIAHPFTKGLDQVVCCLNDDEVRAVAKYEMDD 432
Query: 405 NSVKSSSQCH-------------YFMGLGRKQGVSPQDG-EKFDMRL-TVEEFKSHVVWM 449
+K S H +++GLG + + Q G K D+ T+E K+ +W
Sbjct: 433 EVLKRSETEHEGKDGVSKVFMKTFYIGLGVEPKPAGQTGPRKLDISYPTIEFVKTVKLWD 492
Query: 450 YSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTK--LKKSESST 507
+Q M I + +++ +PD F GGVR + KR + + + K + S
Sbjct: 493 LYEEEQ-MGIVIRYVKHSALPDNCFEGGVRQALAGKGVKRTKSKAGDGKKPLSRTSPHDV 551
Query: 508 AGHSSGQKSSQTESGVALDGSHGLKSGPSVEPSTSSVSSSTSASSR 553
+G S K + +S L G H G S S + +S +T+ +R
Sbjct: 552 SGDYSPHKKQRKDS---LTGDHDGLLGLSDAASANPLSKTTNGHAR 594
>gi|339236667|ref|XP_003379888.1| poly(A) polymerase gamma [Trichinella spiralis]
gi|316977404|gb|EFV60513.1| poly(A) polymerase gamma [Trichinella spiralis]
Length = 923
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 188/478 (39%), Positives = 279/478 (58%), Gaps = 26/478 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT LD+ ++ELE++L + LF S+ E R+EVL +++ + + WI+ +++ + +
Sbjct: 215 ISMADPTELDLRQSEELERVLHEYGLFESDAELTHRMEVLRKVNLLFRQWIRDLSIQRNM 274
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DID LCV P + R +DFF +L+ P V
Sbjct: 275 P-PDVADSVGGKIFTFGSYRLGVHTRGADIDTLCVAPRHILR-EDFFTSFKDLLKSQPEV 332
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ P+ +A VPVIK KF+G+ +D+++A+L +PE+ D LL NLD + + SLNG
Sbjct: 333 SECRPIEEAFVPVIKLKFDGIELDMVFARLALKEVPENQKLDDDELLRNLDVKCIRSLNG 392
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKR-RGIYSNAMGFLGGINWALLVARVCQLYPN 242
CRVTD IL+LVPN FR TLR ++FWAKR +G+YSN +GFLGG++WA+LVAR CQLYP
Sbjct: 393 CRVTDEILNLVPNKETFRLTLRAIKFWAKRKKGVYSNVVGFLGGVSWAMLVARTCQLYPR 452
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPI------QYQAMPHHVWDPRSNQRDRKHLMPII 296
A PNVLV++ +WP PV+L Y +WDPR Q DR HLMPII
Sbjct: 453 AAPNVLVNK--------EWPKPVLLKNSITSQNHGYIGFQELIWDPRVKQSDRYHLMPII 504
Query: 297 TPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQ 356
TP++P NS++NVSSTT I+Q+ + E+ +W LFEP +FF +K+Y+
Sbjct: 505 TPAFPQQNSTFNVSSTTRSILQKFLHEGFLVSTEVICKGLSWPKLFEPSNFFVKYKHYIV 564
Query: 357 IHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSE-NSVKSSSQCHY 415
I A D W G VES++R LI E + GVL + P FS + +
Sbjct: 565 ISCFAATRADLITWSGLVESKMRYLIGQFEHNT-GVLLAHVNPEQFSPLEEHGDGVESFW 623
Query: 416 FMGLG-RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDI 469
+GL K+G+ ++ D+ ++ F ++ + W+QGM++ + R +++
Sbjct: 624 VVGLEMNKEGIGAKN---IDLTSDIQSFVDSIMRQALNSDVWRQGMKVEAKYRRRREL 678
>gi|294939386|ref|XP_002782444.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239894050|gb|EER14239.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 553
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 184/433 (42%), Positives = 262/433 (60%), Gaps = 30/433 (6%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PTV D+ + + + L AS+E+ R + L L+G++ DW+ V + +G+
Sbjct: 22 ISEAGPTVADLKQNEGMLEFLTTAAPEASKEDREKREKALRVLEGVIGDWLTEVGVQQGM 81
Query: 64 SDEE-QIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL 122
+ E + Q N KLFTFGS+RLG+ PS+DID LCV P + TR + FFG L LQ+
Sbjct: 82 TAENARKQSNNGKLFTFGSHRLGLISPSSDIDCLCVAPRHVTR-EAFFGSLVGKLQQMDE 140
Query: 123 VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLN 182
VE +TPVPDA P+IK V +DLL+A+L + D D LL NLD+++V +N
Sbjct: 141 VETVTPVPDAYAPIIKLICCEVDIDLLFARLNLTSTSGLKDLQSDELLKNLDDRSVRCVN 200
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
G RV D IL LVP FR LR ++ WAKRRG+Y+N +GF GGI WA+LVARVCQ++PN
Sbjct: 201 GTRVADLILKLVPTPNTFRGCLRLIKLWAKRRGLYANIIGFFGGITWAILVARVCQMFPN 260
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA----MPHHVWDPRSNQRDRKHLMPIITP 298
LV RFF I + W W NPV LCPI+ + M VW+P+ DR HLMP+ITP
Sbjct: 261 MQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPKQYASDRSHLMPVITP 320
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELC----EEIEAGKRTWITLFEPYHFFGSFKNY 354
++P NS+YNV+ TT RI+ E +RA +L E+++ W L + FF ++ Y
Sbjct: 321 AFPSMNSTYNVTETTKRIIMGEIERAHKLTLPKKEQVD-----WELLCHKFPFFCNYLYY 375
Query: 355 LQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYP--------GDFSENS 406
+QI ++A ++ +R++KG+VESRLR L+ M+E + G+ R +P G+ ENS
Sbjct: 376 VQIRVSALSSTAYRKYKGFVESRLRLLVRMLE-NTPGIKSVRPWPEEMPYVVDGEVRENS 434
Query: 407 VKSSSQCHYFMGL 419
C +++GL
Sbjct: 435 ------CCWYIGL 441
>gi|448081751|ref|XP_004194965.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359376387|emb|CCE86969.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 199/553 (35%), Positives = 304/553 (54%), Gaps = 51/553 (9%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT + L + L F SE + RVEVL L + + ++ V++ K +
Sbjct: 12 ISTANPTAKENSLNDSLIRELKARGSFESEAATRKRVEVLNELQKMAERFVYEVSLQKNM 71
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD ++A K+FTFGSYRLGV GP +DIDAL V P + TR +DFF ++L+E +
Sbjct: 72 SDG-MARDAGGKIFTFGSYRLGVYGPGSDIDALVVVPKHVTR-NDFFEVFEKILRERKDL 129
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
E++ VPDA VP+IK NG+S+DL++A+L +P+DL +LL N+DE+ + SLNG
Sbjct: 130 EEIAAVPDAYVPIIKMILNGISIDLIFARLDVPKVPKDLKLDDKNLLRNIDEKDLRSLNG 189
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL+LVP F+ LRC++ WA++R IY+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 190 TRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQLYPNA 249
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ V+V +FF I+A W WP PV+L I+ + VW+PR DR+H MP+ITP+YP
Sbjct: 250 VSAVIVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITPAYPSM 309
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++N++S+T +I+ +EF+R ++ +I +TW L + FF ++K YL I A K
Sbjct: 310 CATHNITSSTQKIIMKEFRRGIDIMNQINGNNKTWANLLARHTFFHNYKFYLCIVAATKG 369
Query: 364 A-GDFRQWKGWVESRLRQLIHMIERDMGGVLQ---CRLYPGDFSENSVKSSSQCHYFMGL 419
+ +W G VESRLR L+ +E G L + + FS N + +
Sbjct: 370 PYEEHIKWSGMVESRLRILVQKLELTEGIELAHPYVKTFEHSFSSNDSEKIQEV--INTY 427
Query: 420 GRKQG---------VSPQDGE-----------------------------KFDMRLTVEE 441
G QG + PQ E K D++ E
Sbjct: 428 GTLQGEKLTKDVTQIDPQSKESEDSSDNIKVHLTKLFIGLEIDLNKGGEKKLDIQYPCSE 487
Query: 442 FKSHVVWMYSSWKQGMQ-IHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKL 500
F ++ + S+ + + + + H++ D+P+ V+ G R P + KR+++ V + K
Sbjct: 488 F-FNICKSWQSYDEKLHSVQIKHVKLYDLPNDVYVEGERRP--VKTSKRRKLAVKDDDKK 544
Query: 501 K-KSESSTAGHSS 512
+ KS + A +S
Sbjct: 545 RPKSVGAVATAAS 557
>gi|448086239|ref|XP_004196053.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359377475|emb|CCE85858.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 198/553 (35%), Positives = 305/553 (55%), Gaps = 51/553 (9%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT + L + L F SE + RVEVL L + + ++ V++ K +
Sbjct: 12 ISTANPTAKENSLNDSLIRELKARGSFESEAATRKRVEVLNELQKMAEKFVYEVSLQKNM 71
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD ++A K+FTFGSYRLGV GP +DIDAL V P + TR +DFF ++L+E +
Sbjct: 72 SDG-MARDAGGKIFTFGSYRLGVYGPGSDIDALVVVPKHVTR-NDFFEVFEKILRERKEL 129
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
E++ VPDA VP+IK NG+S+DL++A+L +P+DL +LL N+DE+ + SLNG
Sbjct: 130 EEIAAVPDAYVPIIKMVLNGISIDLIFARLDVPKVPKDLKLDDKNLLRNIDEKDLRSLNG 189
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL+LVP F+ LRC++ WA++R IY+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 190 TRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQLYPNA 249
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ V+V +FF I+A W WP PV+L I+ + VW+PR DR+H MP+ITP+YP
Sbjct: 250 VSAVVVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITPAYPSM 309
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++N++S+T +I+ +EF+R ++ +I +TW L + FF ++K YL I A K
Sbjct: 310 CATHNITSSTQKIIMKEFRRGIDIMNQISGNNKTWANLLARHTFFHNYKFYLCIVAATKG 369
Query: 364 A-GDFRQWKGWVESRLRQLIHMIERDMGGVLQ---CRLYPGDFSENSVKSSSQCHYFMGL 419
+ + +W G VESRLR L+ +E G L + + FS N + +
Sbjct: 370 SYEEHIKWSGMVESRLRILVQKLELTEGIELAHPYVKTFEHSFSSNDSEKIQEV--INSY 427
Query: 420 GRKQG---------VSPQDGE-----------------------------KFDMRLTVEE 441
G QG PQ+ E K D++ E
Sbjct: 428 GTLQGEKLTKDVTQTDPQNKESEDSSDTIKVHLTKLFIGLEIDLNKGGEKKLDIQYPCSE 487
Query: 442 FKSHVVWMYSSWKQGMQ-IHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKL 500
F ++ + S+ + + + + H++ D+P+ V+ G + P + KR+++ V + K
Sbjct: 488 F-FNICKSWQSYDEKLHSVQIKHVKLFDLPNDVYVEGEQRP--VKTSKRRKLAVKDDDKK 544
Query: 501 K-KSESSTAGHSS 512
+ KS + A +S
Sbjct: 545 RPKSVGAVATAAS 557
>gi|84999896|ref|XP_954669.1| polyA polymerase [Theileria annulata]
gi|65305664|emb|CAI73989.1| polyA polymerase, putative [Theileria annulata]
Length = 512
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/492 (36%), Positives = 282/492 (57%), Gaps = 15/492 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKR-VTMDKG 62
+S PT D+ +++EL +L L+ ++E R ++L L+ +++ +++R +++G
Sbjct: 19 VSNEGPTNNDIKASRELLNLLKSYNLYETDEGKKRREDILESLNRLLQQFVRRQAKINRG 78
Query: 63 ISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL 122
++D+E Q + KL TFGSYRLG+ P +DID LC+ P TR + FF + L +
Sbjct: 79 LTDQEASQ-VSGKLLTFGSYRLGIVAPDSDIDVLCLCPRSVTR-ESFFSDFYNTLTKVEG 136
Query: 123 VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLN 182
+ L PVPDA PVIK F +S+D+L+A L + ++ L D++L N+++ TV S+N
Sbjct: 137 ISKLQPVPDAYTPVIKLYFYEISIDILFANLDAPTVSPHINVLDDNILRNMNDSTVRSIN 196
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
GCRV IL VPN FR+TLR ++ WA RR IYS +G+LGG+ WA+L ARVCQLYPN
Sbjct: 197 GCRVASYILDSVPNKNYFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARVCQLYPN 256
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA-----MPHHVWDPRSNQRDRKHLMPIIT 297
PN L+ +FF++F+ W+W PV LC I+ M VWDPR N +DR HLMPIIT
Sbjct: 257 CAPNQLIEKFFRVFSVWQWECPVTLCKIKEPPNIPGLMSFKVWDPRVNPQDRHHLMPIIT 316
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIE-AGKRTWITLFEPYHFFGSFKNYLQ 356
P++P NS++NV++TT +++ EE RA E+ + + W + E F ++K++L
Sbjct: 317 PAFPSMNSTHNVTATTKKVITEELMRALEIFKTPNLSNLELWEKVLEEQDVFSNYKHFLV 376
Query: 357 IHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYF 416
I + +W+GW+ SR+R LI +E ++G R PG F F
Sbjct: 377 IEVYGSTEHAHGKWEGWIGSRMRFLISRLE-NLGNT-HIRPIPGFFKFEDDNWDYASSAF 434
Query: 417 MGLGRKQGVSPQDGEKFDMRLTVEEFKSHV-VWM-YSSWKQGMQIHVSHLRCQDIPDFVF 474
GV+ ++ + D+R V+ FK + W ++ + ++ HL+ +PD+V
Sbjct: 435 FAFKVISGVA-ENSKTLDIRSAVQSFKDIINNWSDMEKYRDQISFNIKHLKNNQLPDYVL 493
Query: 475 PGGVRPPKSLNE 486
+ +S+NE
Sbjct: 494 SNKSK-KRSINE 504
>gi|47221727|emb|CAG10199.1| unnamed protein product [Tetraodon nigroviridis]
Length = 685
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 181/410 (44%), Positives = 255/410 (62%), Gaps = 18/410 (4%)
Query: 92 DIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTP---VPDARVPVIKFKFNGVSVDL 148
DIDALCV P + R DFF F L++ ++DL V DA VPVIKFKF+G+ +DL
Sbjct: 111 DIDALCVAPRHVER-TDFFQSFFEKLKQHEEIKDLRVCLCVEDAFVPVIKFKFDGIEIDL 169
Query: 149 LYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLR 208
L+A+L IP++LD DS+L NLD + + SLNGCRVTD IL LVPN NFR TLR ++
Sbjct: 170 LFARLALPSIPDNLDLRGDSILKNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIK 229
Query: 209 FWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLC 268
WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA+ LV +FF +F+ W+WPNPV+L
Sbjct: 230 LWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLK 289
Query: 269 PIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELC 328
+ + VWDPR N DR HLMPIITP+YP NS+YNVS++T IM EEF+ +
Sbjct: 290 QPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVT 349
Query: 329 EEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERD 388
+EI GK W LFEP HFF +K+Y+ + +A + +W G VES++R L+ +ER+
Sbjct: 350 DEILQGKAEWSKLFEPPHFFQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERN 409
Query: 389 MGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSH 445
L + +PG EN ++ +F+G+ K+ V + D+ ++ F
Sbjct: 410 EYITLAHVNPQSFPGS-KENRNENEFVSMWFIGIIFKK-VENAESVNIDLTYDIQSFTDT 467
Query: 446 VVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRI 492
V ++ K GM+I +H++ + + ++ PP+ + +KKR+ I
Sbjct: 468 VYRQANNINMLKNGMKIEATHVKKKQLNLYL------PPELVQKKKRQSI 511
>gi|320583027|gb|EFW97243.1| poly(A) polymerase isozyme [Ogataea parapolymorpha DL-1]
Length = 1547
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/431 (40%), Positives = 270/431 (62%), Gaps = 8/431 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT + + + L ++ F SE E+ R EVL L + ++++ V+ K +
Sbjct: 974 ISTAGPTAKENELNDAMIEELRNQNSFESESETQKRREVLATLQKLTEEFVYTVSRRKNM 1033
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E ++A K+FTFGSYRLGV GP +DID L V P + TR DDFF +L++ P +
Sbjct: 1034 S-EGMARDAGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVTR-DDFFTVFEELLRKRPEL 1091
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ PVPDA +P+IK F+GV +DL+ +L + DL ++LL N+D++ + +LNG
Sbjct: 1092 NKIQPVPDAFMPIIKTVFDGVDIDLICGRLDIPQVSLDLTLEDNNLLRNIDDRDLRALNG 1151
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD+IL LVP FR LR ++ WA+RR IY+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 1152 TRVTDQILQLVPQKMVFRHALRTIKLWAQRRAIYANMFGFPGGVAWAMLVARICQLYPNA 1211
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ V+VS+FF+I+ WKWP PV+L PI+ +P +W+P+ +DR H MP+ITP+YP
Sbjct: 1212 VGAVIVSKFFQIYLQWKWPQPVLLKPIEDGPLPVRIWNPKLYGQDRLHRMPVITPAYPSM 1271
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++N++++T +I+ +E QR E+ +I+ GKRTW LF + FF ++K YL + A ++
Sbjct: 1272 CATHNITASTQKIILKEMQRGLEIMNDIQFGKRTWKDLFAKHDFFFAYKFYLTVITATRD 1331
Query: 364 AGDFR-QWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRK 422
+ + +W G VES+LR L+ +E + G++ Y FS + + + + + + +
Sbjct: 1332 SYEAHLKWSGMVESKLRLLVQKLEV-VNGIVLAHPYVKPFSASYICDTEEQVFKI----R 1386
Query: 423 QGVSPQDGEKF 433
+ DGEK+
Sbjct: 1387 ELYGSLDGEKY 1397
>gi|302904195|ref|XP_003049022.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729956|gb|EEU43309.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 612
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 249/388 (64%), Gaps = 4/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS+ PT ++ +T L + L +K F S+ ++ R EVL + I +I++V +K
Sbjct: 13 ISSQLPTDAELRATDALLEELKRQKTFESQADTAKREEVLASIQNIANAFIRQVAQEKEP 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
++ I+ A ++FT+GSYRLGV GP +DID L + P Y TR D F F L +
Sbjct: 73 KNDVLIRNARGRVFTYGSYRLGVYGPGSDIDTLIIAPKYVTRDDYFKYFPDLLVSMAPKD 132
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDS-LLHNLDEQTVLS 180
+ L V DA VP+IKF+++G+S+DL+++++ +P D +L+DS LL LDE + S
Sbjct: 133 AITGLAVVTDAFVPIIKFEYSGISIDLIFSRIIQKQLPPDFTNLKDSGLLRGLDEAELRS 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD IL+LVP F+ LR ++ WA+RR +Y+N MGF GG+ WA+LVARVCQLY
Sbjct: 193 LNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A P+V+V++FF + + W+WP PV+L PI+ +P VW+PR + D HLMP+ITP+Y
Sbjct: 253 PKATPSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPRVYKGDSFHLMPVITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHI 359
P +++N++ ++++++ E RA ++ E I GKR W LF + FF +K Y+ +
Sbjct: 313 PSMCATFNITRSSMKVINRELSRALQISESIMVGKRPWSDLFVKHTFFTQGYKYYISVIS 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
+AK+ D + W G+VES++R L+ +E+
Sbjct: 373 SAKSKEDHKIWSGYVESKVRMLVQKLEQ 400
>gi|406606978|emb|CCH41700.1| poly(A) polymerase [Wickerhamomyces ciferrii]
Length = 572
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 194/529 (36%), Positives = 299/529 (56%), Gaps = 50/529 (9%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT + + +L + L + F SE E+ R+EVL L + +++ +V+ +K +
Sbjct: 13 ISLAGPTPAENVLNDQLIQELKKQGNFESESETKKRIEVLQLLQNLATNFVYKVSKNKNM 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E ++A K+FT+GSYRLGV GP +DID L V P + TR DDFF +L+ +
Sbjct: 73 S-EGMAKDAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVTR-DDFFTVFDELLRTRSEL 130
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
E++ PVPDA VP+IK K +G+ +DL+YA+L +P +L +LL NLDE+ + SLNG
Sbjct: 131 EEIAPVPDAFVPIIKVKISGIEIDLIYAKLDLPQVPINLTLGDKNLLRNLDEKDLRSLNG 190
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVP F+ +LR ++ WA+RR IY+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 191 TRVTDEILQLVPKPVVFKLSLRAIKLWAQRRAIYANIFGFPGGVAWAMLVARICQLYPNA 250
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ +V+VS+FF I W WP PV+L PI+ + VW+PR +DR+H MP+ITP+YP
Sbjct: 251 VSSVIVSKFFHILTQWNWPQPVLLKPIEDGPLQVRVWNPRVYPQDRQHRMPVITPAYPSM 310
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++N++++T +++ E QR + +I + K+ W LF + FF +K YL +I A
Sbjct: 311 CATHNITASTQKVILNELQRGSLIMNDIISHKKQWEDLFVKHDFFYKYKFYL--NIIAFT 368
Query: 364 AGDFRQ---WKGWVESRLRQLIHMIERDMGGVL---------------------QCRLYP 399
GD Q W G VES+LR L+ +E G L + L
Sbjct: 369 RGDDEQHLKWSGLVESKLRLLVQKLENFQGINLAHPYVKTFEKSYLYSSDEELREIELNF 428
Query: 400 GDFS----------------ENSVKSSSQCHYFMGL--GRKQGVSPQDGEKFDMRLTVEE 441
G+FS E+ + S+ +F L G VS +D +KFD+ + +
Sbjct: 429 GNFSKESNLKKFKEITEENKEDPIPEGSKIIHFTSLYIGLDITVSGED-KKFDIHVPCND 487
Query: 442 FKSHVVWMYSSWKQGM--QIHVSHLRCQDIPDFVFPGGVRPPKSLNEKK 488
F + + + + + +++ H++ D+P FV+ G P+ N+K+
Sbjct: 488 FFT-LCRGFPDYNDSLIYGLNIKHVKLYDLPSFVYGEGETRPEKPNKKR 535
>gi|365991615|ref|XP_003672636.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
gi|343771412|emb|CCD27393.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/383 (44%), Positives = 252/383 (65%), Gaps = 7/383 (1%)
Query: 5 STSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGIS 64
ST+A L+ +EL+K E F +E+E+ RV+VL L + ++++ +V+ +K +S
Sbjct: 18 STAAENKLNDELVQELKK----ENSFETEQETANRVKVLEILQKLTENFVFKVSKNKNMS 73
Query: 65 DEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVE 124
D +++ K+FTFGSYRLGV GP +DID L V P + TR +DFF +L+E P +E
Sbjct: 74 D-GMAKDSGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVTR-EDFFTVFDSLLRERPELE 131
Query: 125 DLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGC 184
++ PVPDA VPVIK KF+G+S+DLL A+L + +P +L +LL NLDE+ + +LNG
Sbjct: 132 EIAPVPDAFVPVIKVKFSGISIDLLCARLDIAQVPLNLTLSDKNLLRNLDEKELRALNGT 191
Query: 185 RVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNAL 244
RVTD IL LVP FR TLR ++ WA+RR IY+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 192 RVTDEILELVPKPNVFRITLRAIKLWAQRRAIYANVFGFPGGVAWAMLVARICQLYPNAC 251
Query: 245 PNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTN 304
V+++RFFKIF+ WKWP PV+L PI+ + VW+P+ +DR H MP+ITP+YP
Sbjct: 252 SAVVLNRFFKIFSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMC 311
Query: 305 SSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNA 364
+++N++ +T I+ +EF R ++ +I + K W LF+ + FF +K YL I + +
Sbjct: 312 ATHNITESTKTIILKEFARGVQVTNDIFSNKGNWGDLFKKHTFFYEYKFYLTITASTRGT 371
Query: 365 G-DFRQWKGWVESRLRQLIHMIE 386
+ +W G VES+LR LI +E
Sbjct: 372 DEEHLKWSGLVESKLRLLILKLE 394
>gi|45185228|ref|NP_982945.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|44980886|gb|AAS50769.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|374106148|gb|AEY95058.1| FABL002Cp [Ashbya gossypii FDAG1]
Length = 598
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 202/550 (36%), Positives = 298/550 (54%), Gaps = 48/550 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS PT + EL + L E F SEEE+ R++VL L + ++++ +V+ + +
Sbjct: 13 ISKEGPTAAENKLNDELIQELKKEGTFESEEETAKRIKVLEELQALAQEFVFKVSRKRNM 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E ++A K+FTFGSYRLGV GP +DID L V P + TR DDFF +L+ P +
Sbjct: 73 S-EGMARDAGGKIFTFGSYRLGVHGPGSDIDTLVVVPKHVTR-DDFFTVFDELLRARPEL 130
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+++ PVP+A VP+IK K++G+S+DL+ A+L +P +L +LL NLDE+ + +LNG
Sbjct: 131 DEIAPVPEAFVPIIKIKYSGISIDLICARLDIPQVPLNLTLSDKNLLRNLDEKDLRALNG 190
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVP F+ LR ++ WA+RR +Y+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 191 TRVTDEILELVPKPTAFKIALRAIKLWAQRRAVYANVFGFPGGVAWAMLVARICQLYPNA 250
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
V+V+RFF I W WP PV+L PI+ + VW+P+ DR H MP+ITP+YP
Sbjct: 251 CSAVIVARFFHILTRWSWPQPVLLKPIEDGPLQVRVWNPKIYANDRLHKMPVITPAYPSM 310
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
S++N+ +T +++ E QR E+ +I K+TW LF+ + FF +K YL + + K
Sbjct: 311 CSTHNICESTKKVILNELQRGVEVTTDIFTNKKTWGDLFQKHDFFYKYKFYLTVMASTKG 370
Query: 364 AGD-FRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF-SENSVKSSSQC-HYFMGLG 420
+ + +W G VES+LR L+ +E + G+ Y F S + K+ Q F G
Sbjct: 371 SDEQHLKWSGLVESKLRLLVLKLEV-LSGINLAHPYTKPFESTYAYKTEEQYKEIFDNYG 429
Query: 421 R-------KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSW------KQGMQIHV------ 461
K+ + K D L E K H+ MY K+ + IHV
Sbjct: 430 THKTEDVLKKYTEVTNENKDDESLKGME-KVHITTMYIGLNIAVDEKKKIDIHVPCQEFF 488
Query: 462 -------------------SHLRCQDIPDFVF-PGGVRPPKSLNEKKRKRIEVIESTKLK 501
+++ D+PD V+ G RP K+ KKRK + + K
Sbjct: 489 NLCRSFQEYEDTETFSLVIKYVKLYDLPDHVYDEGEQRPVKA--SKKRKNEKAGKKAKRP 546
Query: 502 KSESSTAGHS 511
KS S A +
Sbjct: 547 KSSSVLAADA 556
>gi|308478522|ref|XP_003101472.1| CRE-PAP-1 protein [Caenorhabditis remanei]
gi|308263118|gb|EFP07071.1| CRE-PAP-1 protein [Caenorhabditis remanei]
Length = 639
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 173/395 (43%), Positives = 249/395 (63%), Gaps = 8/395 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D++ T++L + L + + E+ R+EVL L+ +VK+W+K VT K
Sbjct: 16 ISLAHPDAKDILLTEQLVETLKKCNSYEPKAETEKRMEVLRSLNRLVKEWVKNVTAIKIP 75
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E A KLFTFGSYRLGV DID L V P + R DFF ML + P V
Sbjct: 76 SGEGA--NAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDR-TDFFTSFKEMLSQDPNV 132
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V +A VPV+K K++GV +D+L+A+L +P+ + DSLL NLD+++V SLNG
Sbjct: 133 TELHAVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDSLLKNLDQESVRSLNG 192
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV +++L LVP N+ LR ++ WAK GIYSN+MGF GGI+WA+L+AR CQLYPNA
Sbjct: 193 CRVAEQLLKLVPRQNNYCVALRAIKLWAKNHGIYSNSMGFFGGISWAILIARACQLYPNA 252
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQ-----AMPHHVWDPRSNQRDRKHLMPIITP 298
P+ LV R F IFA W WP+PV+L + + A+ VWDPR DR HLMPIITP
Sbjct: 253 SPSRLVHRMFFIFATWTWPHPVLLNELNSERTDVGALIDLVWDPRRKSTDRFHLMPIITP 312
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIH 358
++P NS++NV+ +T+++++ E E+C +I GK W LF+ +FF +K+Y+ +
Sbjct: 313 AFPQQNSTHNVTRSTMQVIRTEICEGLEICRDISEGKCGWDALFKEVNFFSRYKHYIALL 372
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVL 393
+AA N + + G++ESR+R L+ +ER+ V+
Sbjct: 373 MAAPNEEEELNYGGFLESRIRLLVQSLERNQDIVI 407
>gi|348554483|ref|XP_003463055.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Cavia porcellus]
Length = 741
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 220/572 (38%), Positives = 319/572 (55%), Gaps = 31/572 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDWVLTQKLIETLKPFGVFEEEEEPQRRILILGKLNNLVKEWIREISESK-V 84
Query: 64 SDEEQIQEANAKLFTFG--SYRLGVAG---PSTDIDALCVGPCYATRHDDFFGKLFRMLQ 118
S E ++ FT+G YR+G DIDALCV P + R DFF + L+
Sbjct: 85 SPESVFLDSG---FTWGPCKYRIGXWDYYFLGADIDALCVAPRHVDR-SDFFTSFYDKLK 140
Query: 119 ETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTV 178
V+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + +
Sbjct: 141 LQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCI 200
Query: 179 LSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQ 238
SLNGCRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQ
Sbjct: 201 RSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQ 260
Query: 239 LYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITP 298
LYPNA+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP
Sbjct: 261 LYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITP 320
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIH 358
+YP NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ +
Sbjct: 321 AYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLL 380
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHY 415
+A +W G VES++R L+ +E++ L + P F EN K + +
Sbjct: 381 ASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMW 439
Query: 416 FMGLGRKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIP 470
+GL K+ ++ E + LT ++ F V + K M+I H++ + +
Sbjct: 440 VIGLVFKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLH 496
Query: 471 DFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHG 530
+ P L +KK+ E ++ T L ++SS S S + +
Sbjct: 497 QLL------PNHVLQKKKKHSTEGVKLTAL--NDSSLDLSMDSDNSMSVPSPTSATKTSP 548
Query: 531 LKSGPSVEPSTSSVSSSTSAS-SRPQRPAVSI 561
L S S + S + T+AS + Q P VS+
Sbjct: 549 LNSSGSSQGRNSPAPAVTAASVTNIQAPEVSV 580
>gi|50292873|ref|XP_448869.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528182|emb|CAG61839.1| unnamed protein product [Candida glabrata]
Length = 569
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 202/565 (35%), Positives = 312/565 (55%), Gaps = 54/565 (9%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + PT + EL + L E F SE+E+ RV+VL L + + ++ V+ K +
Sbjct: 13 VSIAGPTAAENKLNDELIQELKKENSFESEQETANRVKVLKTLQELTEKFVYEVSKKKNM 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD ++A K+FT+GSYRLGV GP +DID L V P + TR +DFF +L+E +
Sbjct: 73 SDG-MARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDALLREREEL 130
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+++ PVPDA VP+IK KF+G+S+DL+ A+L + + L +LL NLDE+ + +LNG
Sbjct: 131 DEIAPVPDAFVPIIKLKFSGISIDLICAKLDIAQVKPSLTLDDKALLRNLDEKDLRALNG 190
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVP FR LR ++ WA+RR IY+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 191 TRVTDEILELVPKPSVFRIALRAIKIWAQRRAIYANVFGFPGGVAWAMLVARICQLYPNA 250
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
V+++RFFKI + WKWP PV+L PI+ + VW+P+ +DR H MP+ITP+YP
Sbjct: 251 CSAVILNRFFKILSEWKWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSM 310
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK- 362
+++N++ +T ++ +E R ++ +I A K+TW LF + FF +K YL I A +
Sbjct: 311 CATHNITESTKAVILKELNRGIQVTNDIFAYKKTWADLFTKHDFFFQYKYYLTITAATRG 370
Query: 363 NAGDFRQWKGWVESRLRQLIHMIE------------------------RDMGGVLQ---- 394
+ + +W G VES+LR L +E +D +L
Sbjct: 371 DDEEHLKWSGLVESKLRLLTLKLETIPGIKLAHPFFKPFEAAYCYTDDQDAKTILNNHGS 430
Query: 395 ----------CRLYPGDFSENSVKSSSQCH---YFMGLGRKQGVSPQD-GEKFDMRLTVE 440
++ + + VKS + H ++GL GVS ++ EK DM +
Sbjct: 431 HITEKALEKFTKVTDENKDDEDVKSKKKVHITTMYVGL----GVSVENKKEKIDMHIPCG 486
Query: 441 EFKSHVVWMYSSWK--QGMQIHVSHLRCQDIPDFVF-PGGVRPPKSLNEKKRKRIEVIES 497
EF + + S++ + + + +L+ ++PD VF RP K L+ KKRK + E
Sbjct: 487 EFFNLCRNFHESYQNPEVYSLVIRYLKSYELPDDVFGEDEQRPTKKLS-KKRKEAKYDEE 545
Query: 498 TKLKKSESSTAGHSSGQKSSQTESG 522
K+S++ T S+ +++ S
Sbjct: 546 AA-KRSKAETISKSAVSEATTVSSA 569
>gi|366987349|ref|XP_003673441.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
gi|342299304|emb|CCC67054.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
Length = 581
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 166/388 (42%), Positives = 251/388 (64%), Gaps = 3/388 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + PT + EL + L E F +E+E+ RV+VL L + + ++ +V+ +K +
Sbjct: 13 VSVAGPTAPENKLNDELIQELKKENSFETEQETANRVKVLETLQMLTEKFVFQVSKNKNM 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD ++A K+FT+GSYRLGV GP +DID L V P + TR +DFF +L+E +
Sbjct: 73 SDG-MAKDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDALLRERDEL 130
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+++ PVPDA VP+IK KF+G+S+DL+ A+L + +P +L +LL NLDE+ + +LNG
Sbjct: 131 DEIAPVPDAFVPIIKMKFSGISIDLICARLDIAQVPLNLTLSDKNLLRNLDEKDLRALNG 190
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVP FR LR ++ WA+RR IY+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 191 TRVTDEILELVPKPNVFRIALRAIKLWAQRRAIYANIFGFPGGVAWAMLVARICQLYPNA 250
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
V+++RFFKI + WKWP PV+L PI+ + VW+P+ +DR H MP+ITP+YP
Sbjct: 251 CSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSM 310
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++N++ +T +++ EEF R ++ +I + K TW LF+ + FF +K YL I ++ K
Sbjct: 311 CATHNITESTKKVILEEFARGIQVTNDIFSNKGTWADLFQKHDFFYKYKFYLTITVSTKG 370
Query: 364 AG-DFRQWKGWVESRLRQLIHMIERDMG 390
+ + +W G VES+ R L+ +E G
Sbjct: 371 SDEEHLKWSGLVESKTRLLVLKLEALAG 398
>gi|156843263|ref|XP_001644700.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
gi|156115348|gb|EDO16842.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
Length = 572
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 167/384 (43%), Positives = 249/384 (64%), Gaps = 3/384 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+ST++PT + EL + L E F SE+E+ RV+VL + ++++ RV+ K +
Sbjct: 13 VSTASPTAAENKLNDELIQELKKEGSFESEQETAKRVKVLEIFQQLAQEFVYRVSKSKNM 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD +++ K+FTFGSYRLGV GP +DID L V P + TR +DFF +L++ +
Sbjct: 73 SDG-MAKDSGGKVFTFGSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDELLRKRKEL 130
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
E++ PVPDA VP+IK KF+G+S+DL+ A+L + +P+ L +LL NLDE+ + +LNG
Sbjct: 131 EEIAPVPDAYVPIIKTKFDGISIDLICARLDVAQVPQTLTLSDKNLLRNLDEKDLRALNG 190
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVP FR LR ++ WA+RR +Y N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 191 TRVTDEILELVPKPIVFRIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLVARICQLYPNA 250
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
V+++RFFKI + WKWP PV+L PI+ + VW+P+ +DR H MP+ITP+YP
Sbjct: 251 CSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRCHRMPVITPAYPSM 310
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK- 362
+++N++ +T +++ +EF+R E+ I + K TW LF+ + FF +K YL + + K
Sbjct: 311 CATHNITESTKKVILKEFERGVEITNNIFSNKATWEDLFKRHTFFHDYKFYLTVTASTKG 370
Query: 363 NAGDFRQWKGWVESRLRQLIHMIE 386
N +W G VES++R LI +E
Sbjct: 371 NDEQHLKWSGLVESKVRLLILKLE 394
>gi|344231415|gb|EGV63297.1| Poly(A) polymerase PAPalpha [Candida tenuis ATCC 10573]
Length = 560
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 167/403 (41%), Positives = 253/403 (62%), Gaps = 4/403 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST P+ ++ +L L F SE+ + RVE+L +V++++ +V+ K +
Sbjct: 12 ISTDNPSPKEITLNDQLIAELKARGSFESEQATRKRVEILNLFQKLVQEFVHKVSKSKNM 71
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E ++A K+FTFGSYRLGV GP +DID L V P + TR +DFF +++E P +
Sbjct: 72 S-EGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVTR-EDFFSVFESIVRERPEL 129
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
E++T VPDA VP+IK +F+G+S+DL+ A L +P ++ +LL NLDE+ + +LNG
Sbjct: 130 EEITSVPDAFVPIIKIEFDGISIDLICATLNVPQVPLNMTLDDKNLLRNLDERDMRALNG 189
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVP F+ LRC++ WA+ R +Y N GF GG+ WA++VAR+CQLYPNA
Sbjct: 190 TRVTDEILQLVPKPTVFKHALRCIKMWAQARAVYGNVFGFPGGVAWAMMVARICQLYPNA 249
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ V+V +FF I+ W WP PV+L PI+ + VW+PR DR H MPIITP+YP
Sbjct: 250 VGAVIVDKFFNIYTKWNWPQPVLLKPIEDGPLQVKVWNPRLYTNDRNHRMPIITPAYPSM 309
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK- 362
+++N++S+T +++ E + ++ +I+ GKRTW LF+ + FF +K YL I + K
Sbjct: 310 CATHNITSSTQKVILSELVKGVDIVGDIKLGKRTWSDLFQRHDFFFRYKFYLCIVVGTKA 369
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSEN 405
N + +W G+VES+LR L+ +E G+ Y DF+++
Sbjct: 370 NEEEHSKWSGFVESKLRLLVQKLEA-TSGIEIAHPYVKDFNDS 411
>gi|341899656|gb|EGT55591.1| hypothetical protein CAEBREN_21062 [Caenorhabditis brenneri]
Length = 684
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 182/462 (39%), Positives = 276/462 (59%), Gaps = 19/462 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T++L + L + K + +EE+ R+EVL L+ +VK+W+K VT K
Sbjct: 43 ISVAHPDAKDLALTEQLIETLKEFKSYEPKEETDKRLEVLRALNRLVKEWVKNVTAIKIP 102
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S + A KLFTFGSYRLGV DID L V P + R DFF ML + P V
Sbjct: 103 SGDGA--NAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDR-SDFFTSFKEMLNQDPNV 159
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V +A VPV+K K++GV +D+L+A+L +P++ + D LL NLD +++ SLNG
Sbjct: 160 TELHAVEEAFVPVMKLKYSGVELDILFARLALREVPDNQELSDDQLLRNLDPESIRSLNG 219
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV +++L LVP + F + LR ++ WAK GIYSN+MGF GGI+WA+L+AR CQLYPNA
Sbjct: 220 CRVAEQLLKLVPRQKEFCTALRAIKVWAKNHGIYSNSMGFFGGISWAILIARACQLYPNA 279
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQ-----AMPHHVWDPRSNQRDRKHLMPIITP 298
P+ LV R F IF+ W WP+PV+L + + +WDPR DR HLMPIITP
Sbjct: 280 SPSKLVHRMFFIFSTWTWPHPVLLKELNQDRNDIPTLCELIWDPRHKNTDRFHLMPIITP 339
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIH 358
++P NS++NV+ +T +I+++E A E+C +I G+ W LFE +FF +K+++ +
Sbjct: 340 AFPEQNSTHNVTRSTHQIIKDEIWEALEICRDIHDGRAKWSALFEEVNFFSRYKHFIALI 399
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQ----CRLYPGDFSENSVKSSSQ-- 412
+AA N + + G++ESR+R L+ +ER+ +L + P ++ V ++
Sbjct: 400 MAAPNEEEELSYGGFLESRIRLLVQSLERNPDIILAHNDPNKHKPSKNAKFDVSPENKRI 459
Query: 413 CHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWK 454
+F+GL + + D+ ++ FK++V SS K
Sbjct: 460 TVWFIGLEFA-----EHAKNLDLTNEIQRFKTNVELQASSVK 496
>gi|320586365|gb|EFW99044.1| pap-like poly(A) polymerase [Grosmannia clavigera kw1407]
Length = 596
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 198/554 (35%), Positives = 302/554 (54%), Gaps = 53/554 (9%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+ST PT T L + L + F S E+ R +VL L + ++KRV +K
Sbjct: 13 LSTEMPTEEQRRQTDALLEELRQQGTFESTAETQKRFKVLESLRMVADAFVKRVAKEKAP 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHD--DFFGKLFRMLQETP 121
+ ++A AK+FT+GS+RLGV P +DID L V P Y +R D ++F ++ + +
Sbjct: 73 DNPTLFRDACAKIFTYGSFRLGVYMPGSDIDTLVVAPKYVSREDYFNYFPEMLQAMTPPG 132
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLD-SLQDS-LLHNLDEQTVL 179
+ DLTPV DA VP+IKF++NG+S+DL+++++ + +P D L+DS LL LDE +
Sbjct: 133 SITDLTPVEDAFVPIIKFEYNGISIDLIFSRVLLTQLPSDDKWGLKDSNLLRGLDEAELR 192
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
S+NG RVTD ILSLVP R FR LR ++ WA+RR IY+N +GF GG+ WA++VARVCQL
Sbjct: 193 SVNGTRVTDEILSLVPEQRTFRDALRAIKLWAQRRAIYANIVGFPGGVAWAMMVARVCQL 252
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
YP A V+VS+FF I W WPNPV+L PI+ +P VW+P+ + D+ H+MPIITP+
Sbjct: 253 YPKATGAVIVSKFFGIILRWPWPNPVLLKPIEDGPLPVRVWNPKVYRGDQFHIMPIITPA 312
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS-FKNYLQIH 358
YP ++YN+S ++L I++ E +RA E+ + I +G++ W LF + FF S +K Y+ +
Sbjct: 313 YPSMCATYNISQSSLSIIKRELERASEISQMIISGRQQWKDLFVKHTFFTSDYKYYISVI 372
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIER------------------------DMGGVLQ 394
A+ W G+VES++R L+ +ER D+ V
Sbjct: 373 SASTEKDAQNTWSGFVESKVRVLVQGLERHESIALARAFNKGYERTHMCKNQADIDAVQN 432
Query: 395 CRL----------YPGDFSENS----VKSSSQCHYFMGLGRKQGVSPQDGEK-FDMRLTV 439
L GD ++ + +S+ L G+ +G K D+ V
Sbjct: 433 GSLDFMVHKSDEARTGDGADGAAPKDAANSADAIEVFTLTHYIGIELVEGAKSLDLSFQV 492
Query: 440 EEFKSHVVWMYSSWKQGMQ----IHVSHLRCQDIPDFVFPGG----VRPPKSLNEKKRKR 491
+EFK + + + +K + + + H+R +PD VF G VRP K L + +R
Sbjct: 493 DEFK-ELCFGWDKYKGKLSDVATLSIQHVRNVTLPDDVFEPGEVKPVRPTKGLRQGRRNP 551
Query: 492 IEVIESTKLKKSES 505
V + K+ S
Sbjct: 552 AAVAANGNKKRIAS 565
>gi|19073993|ref|NP_584599.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|19068635|emb|CAD25103.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|449329262|gb|AGE95535.1| poly (a) polymerase type 1 [Encephalitozoon cuniculi]
Length = 505
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 184/502 (36%), Positives = 299/502 (59%), Gaps = 24/502 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+ST T ++ + E++K L + F ++E R VLG+L+ +V++++ R+ +KG
Sbjct: 16 LSTRESTEEEIRLSGEMDKYLQERGFFEDDKEGQTRERVLGKLNFMVREFVARMARNKGS 75
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
D E+ K+FTFGSYRLGV DIDALC+ P + +R DFF + L+ P +
Sbjct: 76 GDGER--PCGGKIFTFGSYRLGVHSKGADIDALCIVPRHVSR-SDFFTHFYEELKGDPNI 132
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
E++T + DA VP+IK KF G+ +DL++A+L V+ + ++ L D+LL ++DE+ +LSLNG
Sbjct: 133 EEVTKIEDAFVPIIKLKFQGIPIDLVFARLSIPVVKDGINLLNDTLLKSMDEKCILSLNG 192
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD +L+LVP+++ F S LRC+++WAKRR +Y N G+ GG+ ++L VARVCQLYPNA
Sbjct: 193 SRVTDEMLNLVPSVKTFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLCVARVCQLYPNA 252
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+V +FF++F+ WKWP PV+L P+ VWDP+ D+ H MP+ITP+YP
Sbjct: 253 SSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAYPSM 312
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++NVS++T ++ EF RA ++ + E + + +FE FF ++ ++++ +
Sbjct: 313 CATHNVSNSTQHVITMEFTRAHKILSDPE--RNDFRRIFELSDFFSRYRLFVEVLAMSSC 370
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF--SENSV-------KSSSQC- 413
DF +W+G++ES++R L E + VL +P F +E S+ + +C
Sbjct: 371 EEDFPKWEGYLESKIRILASKFE-AVDDVLYAIPFPKAFRVAEESIEKIGPRMEGMKKCT 429
Query: 414 HYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDF- 472
+F+ + V P G+K + V+EF V Y GM+I V+ L+ +D+ F
Sbjct: 430 AFFIAI----DVIPVKGKKVIVEQQVKEF-IEFVREYEGRASGMRIEVNSLKRKDVQGFL 484
Query: 473 -VFPGGVRPPKSLNEKKRKRIE 493
VF G P + + KR+R+E
Sbjct: 485 RVFYGK-ESPSNEDSSKRRRVE 505
>gi|255723652|ref|XP_002546758.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
gi|240130534|gb|EER30100.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
Length = 557
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/388 (43%), Positives = 250/388 (64%), Gaps = 11/388 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDE----KLFASEEESLGRVEVLGRLDGIVKDWIKRVTM 59
IS + PT + EL +L+ E F SE + RVEVL L + +D++ +V++
Sbjct: 12 ISVANPTAKE----NELNDLLIKELKQRGSFESETATKKRVEVLNILQKMTEDFVFKVSI 67
Query: 60 DKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE 119
K +S E ++A K+FTFGSYRLGV GP +DID L V P + TR +DFF + +L+
Sbjct: 68 KKNMS-EGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLIVVPKHVTR-NDFFETFYELLKT 125
Query: 120 TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVL 179
+E++ PVPDA VP+IK +F G+S+DL++A+L + DL +LL N+DE+ +
Sbjct: 126 RDELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVSRDLTLDDKNLLKNIDEKDLR 185
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
+LNG RVTD IL+LVP F+ LRC++ WA++R IY+N GF GG+ WA+LVAR+CQL
Sbjct: 186 ALNGTRVTDEILTLVPKQTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQL 245
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
YPNA+ V++ +FF I++ W WP PV+L I+ + VW+P+ DR+H MP+ITP+
Sbjct: 246 YPNAVSAVIIEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPKLYAPDRQHRMPVITPA 305
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
YP +++N++S+T +++ EFQR E+ I +G +TW LFE + FF +K YL I
Sbjct: 306 YPSMCATHNITSSTQKVILSEFQRGIEIMNGINSGSKTWSDLFERHDFFFRYKFYLCIVA 365
Query: 360 AAK-NAGDFRQWKGWVESRLRQLIHMIE 386
A K N+ + ++ G VES+LR L+ +E
Sbjct: 366 ATKSNSEEHLKYGGMVESKLRLLVQKLE 393
>gi|390601592|gb|EIN10986.1| Poly(A) polymerase [Punctularia strigosozonata HHB-11173 SS5]
Length = 582
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 203/509 (39%), Positives = 283/509 (55%), Gaps = 41/509 (8%)
Query: 5 STSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGIS 64
ST+ + + +EL+K +K EEE+ R VLGR+ +VK + +++ G+S
Sbjct: 19 STTREKEVTITLLEELKK----QKTIEGEEEARTREIVLGRVAALVKKCVHEISLANGLS 74
Query: 65 DEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVE 124
E A K+FTFGSYRLGV GP +DID LCV P + +R +++F R L+E V
Sbjct: 75 -ESAANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSR-EEWFDVFERRLREMDGVT 132
Query: 125 DLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGC 184
+++ VP+A VPVIK K G+ +D A+L S IPEDLD D+LL NLDE+ V SLNG
Sbjct: 133 EVSGVPEAFVPVIKAKVLGIPIDFTMARLALSSIPEDLDLSDDNLLRNLDERCVRSLNGS 192
Query: 185 RVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNAL 244
RVTD IL LVP + FR LRC++ WA R+ IYSN GFLGG+ WA+LVARVCQLYPNA
Sbjct: 193 RVTDAILRLVPEVNVFRVALRCIKLWATRKAIYSNVNGFLGGVAWAMLVARVCQLYPNAC 252
Query: 245 PNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTN 304
+VSRFF I WKWP PV+L I+ + VW+P+ DR H MPIITP+YP
Sbjct: 253 AGAIVSRFFIIMYQWKWPQPVLLKTIEEGPLNVRVWNPKLYPTDRAHRMPIITPAYPAMC 312
Query: 305 SSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNA 364
+++NV ++T I+ EE ++ EL E+I G W LF + FF ++ YLQ+ + NA
Sbjct: 313 ATHNVMASTQMIITEELKKGSELVEKIIVGTADWSELFIKHDFFDKYRYYLQVIASTGNA 372
Query: 365 GDFRQWKGWVESRLRQLIHMIE------------RDMGGVLQC-------RLYPGDFSEN 405
+W G VESR+RQL+ +E + V C + G+ SE
Sbjct: 373 DLQLKWSGTVESRIRQLVMKLEYVDSLTLAHPFIKGFEQVSYCLSDEEVRAVAQGEISET 432
Query: 406 SVK-------------SSSQCHYFMGLGRKQGVSPQDG-EKFDMRLTVEEFKSHVVWMYS 451
K + +++GL + +G K D+ EF + +V M+
Sbjct: 433 VKKRVLEDIKDKEGASTVYTTTFYIGLAIEPKQPGSNGPRKLDISYPTTEF-TKLVKMWE 491
Query: 452 SWKQG-MQIHVSHLRCQDIPDFVFPGGVR 479
+ + M I V H+R +PD+VF G R
Sbjct: 492 KFDEAKMGIVVRHIRHTALPDYVFGEGGR 520
>gi|341899657|gb|EGT55592.1| hypothetical protein CAEBREN_22785 [Caenorhabditis brenneri]
Length = 630
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 214/612 (34%), Positives = 326/612 (53%), Gaps = 63/612 (10%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T++L + L + K + +EE+ R+EVL L+ +VK+W+K VT K
Sbjct: 18 ISVAYPDAKDLALTEQLIETLKEFKSYEPKEETDKRLEVLRALNRLVKEWVKNVTAIKIP 77
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S + A KLFTFGSYRLGV DID L V P + R DFF ML + P V
Sbjct: 78 SGDGA--NAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDR-SDFFTSFKEMLNQDPNV 134
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V +A VPV+K K++GV +D+L+A+L +P++ + D LL NLD +++ SLNG
Sbjct: 135 TELHAVEEAFVPVMKLKYSGVELDILFARLALREVPDNQELSDDQLLRNLDAESIRSLNG 194
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV +++L LVP + F + LR ++ WAK GIYSN+MGF GGI+WA+L+AR CQLYPNA
Sbjct: 195 CRVAEQLLKLVPRQKEFCTALRAIKVWAKNHGIYSNSMGFFGGISWAILIARACQLYPNA 254
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQ-----AMPHHVWDPRSNQRDRKHLMPIITP 298
P+ LV R F IF+ W WP+PV+L A+ VWDP D+ HLMPIITP
Sbjct: 255 SPSKLVHRMFFIFSTWTWPHPVLLKFAAKDRNDIPALCKLVWDPEKKSSDKFHLMPIITP 314
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIH 358
++P NS++NV+ ++ +I+++E A E+CE+I GK W LFE +FF +K+++ +
Sbjct: 315 AFPEQNSTHNVTRSSSQIIKDEIWEALEICEQINDGKAKWKDLFEEVNFFSRYKHFIALI 374
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMG 418
+AA N + + G++ESR+R L+ +ER+ +L N K S +
Sbjct: 375 MAAPNEEEELSYGGFLESRIRLLVQSLERNPDIIL------AHNDPNKHKPSKNAKF--- 425
Query: 419 LGRKQGVSPQDGEKFDMRLTV----EEFKSHVVWM-----YSSWKQGMQIHVSHLR---- 465
VSP++ R+TV EF H + +K ++ S ++
Sbjct: 426 -----DVSPENK-----RITVWFIGLEFSEHATSLDLTNEIQRFKTNFELQASSVKGIGP 475
Query: 466 -CQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKS---ESSTAGHSSGQKSSQ-TE 520
CQ D + K+R I+VI + L + + S+ + G S++ T
Sbjct: 476 TCQVEIDM-----------FHVKQRNLIQVISAADLSRGRRWKKSSKKQNKGNSSNKLTV 524
Query: 521 SGVALDGSHGLKSGPSVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQV 580
+ A S V PST ++ST ++ P ++ ++AT V + + +V
Sbjct: 525 ARTASTSSVPTTPTSLVAPSTPLSAASTVVTNEP-------DSTTNSATPVIRKRIIQEV 577
Query: 581 GATVAAALATGT 592
+T L T
Sbjct: 578 TSTTTEVLCVST 589
>gi|444321773|ref|XP_004181542.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
gi|387514587|emb|CCH62023.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
Length = 574
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 185/476 (38%), Positives = 278/476 (58%), Gaps = 23/476 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+ST PT + EL + L E F +E E+ RV +L L + ++++ RV+ K +
Sbjct: 13 VSTVGPTAAENKLNDELIQELKKENSFETELETEKRVNILKTLQKLTEEFVYRVSKKKNM 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD +++ K+FTFGSYRLGV GP +DID L V P + +R DDFF +L+ +
Sbjct: 73 SDG-MARDSGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSR-DDFFTIFAELLRGREEI 130
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
E++ PVPDA VP+IK +F+G+S+DLL A+L + IP L +LL NLDE+ + ++NG
Sbjct: 131 EEIAPVPDAFVPIIKTQFSGISIDLLCARLDLAQIPLSLTLSDKNLLRNLDEKDLRAING 190
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVP FR LR ++ WA RR IY+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 191 TRVTDEILELVPKPNVFRIALRAVKIWAPRRAIYANVFGFPGGVAWAMLVARICQLYPNA 250
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
V+++RFFKI WKWP PV+L PI+ + VW+P+ +DR H MP+ITP+YP
Sbjct: 251 CSAVILNRFFKILLEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSM 310
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++N++ +T +++ +EF+R ++ +I K+TW LF+ + FF +K YL + + +
Sbjct: 311 CATHNITDSTKKVILQEFERGVQVTNDIFTNKKTWADLFKKHEFFHKYKFYLTVVASTRG 370
Query: 364 AGD-FRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSEN-SVKSSSQCHYFM---G 418
+ + +W G+VES+LR L+ +E + G+ Y F + S +C M G
Sbjct: 371 STEQHLKWSGFVESKLRLLVLKLET-LAGIKLAHPYIKPFETTYNYTSDEECKEIMENHG 429
Query: 419 LGRKQG-----VSPQDGEKFDMRLTVEEFKS-HVVWMY-------SSWKQGMQIHV 461
+K+ + P D E E+ K H+ MY S K+ + IHV
Sbjct: 430 TYKKEDSIKKYIKPSDEE--STSEDPEDTKQFHITTMYIGLDVNVESKKEKIDIHV 483
>gi|313216525|emb|CBY37820.1| unnamed protein product [Oikopleura dioica]
Length = 643
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 200/595 (33%), Positives = 322/595 (54%), Gaps = 44/595 (7%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S PT D + T++L+K + F + + R++VL +L+ +VKD++++V + +
Sbjct: 8 LSVEGPTEKDKVMTEDLQKTIEPYGAFDTPDGLSHRIQVLTKLNELVKDFVRKVAKECRL 67
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E E K++TFGSYRLGV DID LCV P + TRH FF ML++T V
Sbjct: 68 P-EHLHGELGGKIYTFGSYRLGVHTSDGDIDTLCVVPQHVTRHH-FFTIFLDMLKKTEGV 125
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDLDSLQDSLLHNLDEQTVLSLN 182
+ + +A VP+IK F+G+ +D+L+A+L S +PED D +L NL+E+ V SLN
Sbjct: 126 TECRDIREAFVPLIKLYFDGIDMDILFARLANNSKVPEDQDLRNIEILRNLEEKCVRSLN 185
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVC----- 237
GCRVTD IL LVPNI FR TLR ++ WA+R+GIY NA+GF+GG+ WA+LVAR C
Sbjct: 186 GCRVTDEILHLVPNIETFRLTLRAVKLWARRKGIYKNALGFIGGVCWAMLVARTCQVGLS 245
Query: 238 --------QLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMP---HHVWDPRSNQ 286
QLYPNA P+ L+ +FF +F+ W WP PV L + A P H VWDPR N
Sbjct: 246 CLEFLAIFQLYPNAAPSTLLEKFFLLFSKWDWPKPVFL-KVPEDAPPGFTHPVWDPRFNP 304
Query: 287 RDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEI--------EAGKRTW 338
DR HLMPIITP+YP NS++NVS +TL +M++E + A E ++I E R W
Sbjct: 305 LDRSHLMPIITPAYPHQNSTFNVSRSTLSVMKQEIKDAYETTKQILQKTPNPDEPNTRLW 364
Query: 339 ITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERD---MGGVLQC 395
LF FF +K+++ + A +++W G VES +R+L++ +ER+ + +
Sbjct: 365 ADLFTRTDFFNKYKHFIVLSATADQQEQYQKWIGLVESNIRKLVNDLERNEYILIAHVNV 424
Query: 396 RLYPGDFSENSVKSSSQCHYFMGLG-RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWK 454
D +E C +F+GL + V P D++ + + ++++
Sbjct: 425 DSIELDPAEEGQSPRYVCRWFLGLSFHRCEVKPNINLTSDIQRFTDLLHQAAI-SHNNYT 483
Query: 455 QGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTK----LKKSESSTAGH 510
M++ +++ ++ F+ P R K K+ ++ + + KK+E S + +
Sbjct: 484 PDMRVEARYVKRHNLVKFLTPELARTLKLSKSKEGRKSKTNAQNQSNGNTKKAEESESKN 543
Query: 511 SSGQKSSQT----ESGVALDGSHGLKS---GPSVEPSTSSVSSSTSASSRPQRPA 558
S +++ + +S + + + + G E S + ++A ++ ++PA
Sbjct: 544 SQSKENKEKLETHQSSITMAKDIAITTNFDGQRTERSVKNSEEESAAETKSEKPA 598
>gi|403337557|gb|EJY68000.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 575
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 190/517 (36%), Positives = 312/517 (60%), Gaps = 39/517 (7%)
Query: 10 TVLDVISTKELEKILVDE-KLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQ 68
T D + +K++ +IL ++ + SE + R +LG+L+ I+ +WI+ V +G D++
Sbjct: 44 TYEDTLESKQIVEILKNDFNQYESEGDRKKRDAILGKLNQIIVEWIQNVGKREG-KDDDT 102
Query: 69 IQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTP 128
++ + K+FTFGSYRLGV P TDIDALCV P + R FFG+L +L+ P V+ LT
Sbjct: 103 VKNSGGKIFTFGSYRLGVHSPDTDIDALCVAPRHIERTRHFFGELSDILKNHPGVQKLTE 162
Query: 129 VPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDL-DSLQDSLLHNLDEQTVLSLNGCRVT 187
V +A VPVI F GV +DLL+A+++ + ++L + L D++L N D++++ SLNGCRVT
Sbjct: 163 VQEAYVPVINMVFEGVEIDLLFARVELKEVGQELVNLLDDNILRNCDKESIRSLNGCRVT 222
Query: 188 DRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV 247
D IL LVPN +FR+TLR ++ WAK RGIYSN MGFLGG+ WA+LVA +C PN PN
Sbjct: 223 DSILQLVPNQESFRTTLRVIKLWAKVRGIYSNVMGFLGGVAWAILVANICITCPNLEPNK 282
Query: 248 LVSRFFKIFAHWKW--PNPVMLCPIQ--YQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
L++ FFK + W+W NP++L I+ ++ + + + LMPIITP++P
Sbjct: 283 LLNYFFKAYTQWEWNYQNPILLTEIKNDRNSVNFTIEADLFYEEKQTDLMPIITPAFPSM 342
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEI----EAGKR-----TWITLFEPYHFFGSFKNY 354
N+++NVS +T R M EF++ ++ E + E G + W LF+ ++FF S+ ++
Sbjct: 343 NATFNVSHSTKRAMLIEFEKGLKITEALLARNEDGSKLHQEMNWRRLFKKFNFFKSYVHF 402
Query: 355 LQIHIAAKNAGDFRQWKGWVESRLRQLIHMIER---DMGGVLQCRLYPGDFS-ENSVKSS 410
+QI I +K+A D ++W G++ES++R+L+ +E+ GG ++ R +P + EN++
Sbjct: 403 IQIQILSKSAEDHKKWTGFIESKIRKLLQQLEKLNELKGGCMEFRPWPKSYHLENNLDFP 462
Query: 411 SQCHYFMGLGRKQGVSPQDGE-KFDMRLTVEEFKSHVVWMYSSWKQGMQ--------IHV 461
Y+ G+ K+ S D + + D+ T++ F + S + MQ I +
Sbjct: 463 MDDTYYFGIRIKKNES--DAQMRIDLTDTIKIFYKKLREWISVDHKLMQMIVDKLVDIKI 520
Query: 462 SHLRCQDIPDFVFPGGVRPPKSLNEK-----KRKRIE 493
+++R + +PD + P G ++LNE+ KR+R++
Sbjct: 521 NYIRRETLPDVIRPRGA---QNLNEQDSALGKRQRVD 554
>gi|348506632|ref|XP_003440862.1| PREDICTED: poly(A) polymerase alpha-like [Oreochromis niloticus]
Length = 601
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 209/641 (32%), Positives = 326/641 (50%), Gaps = 70/641 (10%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS P ++I T++L + ++ + E R V RL+ + +DW+K + ++ +
Sbjct: 11 ISEDLPEEENLIQTRKLLDTMKSYNVYENNLEFEHRERVFRRLESLFRDWLKEICIEMNV 70
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ K+F FGSY LGV DIDALCVGP + R FF F L+ V
Sbjct: 71 P-EVVTEKVGGKIFPFGSYHLGVHSKGADIDALCVGPGFLER-KAFFTSFFAKLKAQKEV 128
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+D+ + +A VPVI + G+ +DL++A L +P++LD L +S++ ++D + V S NG
Sbjct: 129 KDIQAIEEAYVPVITLSWEGIQIDLVFALLSRRSVPDNLDLLNNSIVKDIDIRCVRSFNG 188
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVT++IL LVPN+ NFR LR ++ WAK+R IYSN +GFLGG++WA++VAR+CQ+YPNA
Sbjct: 189 YRVTEQILRLVPNVLNFRVALRAIKLWAKQRNIYSNKLGFLGGVSWAIMVARICQVYPNA 248
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FFKIF+ W WP P+ L ++ WDP+ NQ DR HLMPIITP+YP
Sbjct: 249 TTSTLVIKFFKIFSMWVWPIPIRLIEVEKCNYNLPFWDPKVNQSDRCHLMPIITPAYPQQ 308
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
N+S NVS +TL I+ EE R +C+EIE K W LFE FF +++Y + +
Sbjct: 309 NTSVNVSRSTLAILNEEIHRGHAICQEIEQKKAKWSELFEQTDFFQKYQHYAVLEASYTT 368
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+W G VES++R L+ +ER+ L +PG N K + +GL
Sbjct: 369 EEKCLEWVGLVESKIRLLVSTLERNELVSLAHVHPHAFPGHRKANK-KDGQSTMWLIGL- 426
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDI----------P 470
++ +D E+F+ + + +GM + V+ LR +D+ P
Sbjct: 427 ---VLNVKDSERFNSLARSSDI----------YDEGMSLSVACLRREDLIYEPQQRAPQP 473
Query: 471 DFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHG 530
P P S +++ K+ E+ L +SE+ + K + + + +D
Sbjct: 474 SETLPPCHVSPVSADKQGTKKREL-----LHRSETPS-------KKIKDDKSLPVDQLSN 521
Query: 531 LKSGPS--VEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAAL 588
+ +GPS +P+ S + T+ P+ Q F G+ V AL
Sbjct: 522 V-TGPSAFAKPAVSLTAPRTTLGLNPE--------------VYPQEVQFKVWGSPVVVAL 566
Query: 589 ATGTISSFCQNESLEELEPPELTAPCF----KTAFVATQKP 625
T + + C E+ + TAPC +A V + P
Sbjct: 567 LTPAVCTLCGAEA-------QGTAPCLPAGPPSAVVVVRSP 600
>gi|190347092|gb|EDK39304.2| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 169/388 (43%), Positives = 244/388 (62%), Gaps = 3/388 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT + L K L F +E + RVEVL L I ++++ RV+++K +
Sbjct: 12 ISTAEPTSKEKSLNDSLIKELRKRGSFENEAATKKRVEVLNTLQKITEEFVYRVSLNKNM 71
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E ++A K+FT+GSYRLGV GP +DID L V P + R DFF +L+E P +
Sbjct: 72 S-EGMARDAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVNR-TDFFTVFESLLRERPEL 129
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
E++ VPDA VP+IK +F G+S+DL+ A+L +P DL +LL NLDE+ + SLNG
Sbjct: 130 EEIASVPDAFVPIIKIEFGGISIDLICAKLDIGKVPRDLTLGDKNLLRNLDEKDLRSLNG 189
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL+LVP F+ LRC++ WA++R IY+N GF GG+ WA+L AR+CQLYPNA
Sbjct: 190 TRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANIFGFPGGVAWAMLTARICQLYPNA 249
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ V+V +FF I++ W WP PV+L I+ + VW+PR DR H MP+ITP+YP
Sbjct: 250 VSAVIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRSHRMPVITPAYPSM 309
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK- 362
+++N++S+T I+ EF+R E+ +I GK+ W LF + FF +K YL + + K
Sbjct: 310 CATHNITSSTQAIIVSEFKRGAEIMNDISIGKKEWGDLFARHEFFFRYKFYLCVVASTKG 369
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERDMG 390
+A + +W G VES+LR L+ +E G
Sbjct: 370 SAEEHLKWSGMVESKLRILVQKLELTEG 397
>gi|324975520|gb|ADY62700.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 182/508 (35%), Positives = 287/508 (56%), Gaps = 41/508 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+ST+ PT ++ + L + L F SE + R EVL +V+ ++ V++ K +
Sbjct: 11 VSTADPTTKEISLNESLIQELKGRGSFESESATKKRAEVLSLFQTLVQQFVYEVSISKNM 70
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD ++A K+FTFGSYRLGV GPS+DIDAL V P + TR +DFF +++++ P +
Sbjct: 71 SDG-MAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTR-EDFFTTFDKIIRQRPEL 128
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+++ V DA VP+IK +F+G+S+DL+ A+L +P D+ +LL NLDE+ + SLNG
Sbjct: 129 QEINGVSDAFVPIIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDERDLRSLNG 188
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVP F+ LRC++ WA+ R +Y N GF GG+ WA+L AR+CQLYPNA
Sbjct: 189 TRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTARICQLYPNA 248
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ V+V +FF I+ W WP PV+L I+ + VW+PR DR+H MP+ITP+YP
Sbjct: 249 VSAVIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRQHRMPVITPAYPSM 308
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIA-AK 362
+++N++S+T +++ +E R + + I G+++W LF + FF ++ YL + A ++
Sbjct: 309 CATHNITSSTQKVILQELTRGSSIMKSILEGEKSWSDLFARHDFFHRYRFYLCVVAATSE 368
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSV--------------- 407
+A + +W G+VES+LRQL+ +E GV Y DFS V
Sbjct: 369 SAEEHHKWHGFVESKLRQLVIKLE-STEGVELAHPYVKDFSNAYVLNDNNPNDVVNAYGS 427
Query: 408 --------------------KSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVV 447
K Y++GL + K D++ +F S +
Sbjct: 428 FLGQNLINSLEVLKNEGEENKVIRLTKYYIGLELNLDKRTEGVRKLDIQQPCADFYS-IC 486
Query: 448 WMYSSWKQGMQ-IHVSHLRCQDIPDFVF 474
++S+K G+ IH+ +++ D+PD V+
Sbjct: 487 KSFASYKDGITFIHIKNVKLSDLPDDVY 514
>gi|358401751|gb|EHK51049.1| hypothetical protein TRIATDRAFT_288652 [Trichoderma atroviride IMI
206040]
Length = 572
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 196/543 (36%), Positives = 293/543 (53%), Gaps = 61/543 (11%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT + ++ L+ L +K F S E+ R +VL L I +++++V +K
Sbjct: 13 ISVNLPTEAEKRASDALKDELRRQKTFESPSETDKRWKVLDSLQLICNEFVRKVATEKEP 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
+E I+ A K+FT+GS+RLGV GP +DID L V P Y TR D F F L +
Sbjct: 73 KNEILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTREDYFKYFPDLLVAMAPAG 132
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDS-LLHNLDEQTVLS 180
+ DLT V DA VP+IKF+++ +S+DL+++++ I D L+DS LL LDE + S
Sbjct: 133 AITDLTVVTDAFVPIIKFEYSDISIDLIFSRIIQKQISPDFADLKDSSLLRGLDEAELRS 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD IL+LVP F+ LR ++ WA+RR +Y+N MGF GG+ WA+LVARVCQLY
Sbjct: 193 LNGTRVTDEILALVPEEATFKLALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +V+V++FF + W+WP PV+L PI +P VW+P+ + D HLMP+ITP+Y
Sbjct: 253 PKAETSVIVNKFFLVIGQWRWPQPVLLKPIGSGPLPVRVWNPKVYKGDSFHLMPVITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHI 359
P +++N++ +++ I+Q E +R E+ EEI GKR W LF + FF ++ Y+ +
Sbjct: 313 PSMCATFNITRSSMTIIQRELRRGLEISEEIMVGKRPWSDLFVKHTFFTQGYRYYISVVS 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERDMG---------GVLQCRLYPGDFSENSVKSS 410
A+KN + W G+VES++R L+ +E+ G + L D V+
Sbjct: 373 ASKNKEAHKVWSGYVESKVRMLVQKLEQHSSIALAHPFNKGYDRRHLCKNDHEIEQVQEG 432
Query: 411 SQCHYFMGLGRKQ-------------------------------GVSPQDGEK-FDMRLT 438
S G+ Q G+ ++G K D+
Sbjct: 433 SLEFVIKDEGKGQTSEEKNPKLEENQDSSAPTSPVEVYTTTHYIGIELEEGAKSLDLSYQ 492
Query: 439 VEEFKSHVVWMYSSWKQG-------MQIHVSHLRCQDIPDFVFPGGVRPP-----KSLNE 486
V+EFK + +SWK+ + + V H+R ++PD VF G P KSL
Sbjct: 493 VDEFKV----LCTSWKKYEDELRPLVSLGVQHVRNFNLPDDVFEAGETKPQKKSAKSLAS 548
Query: 487 KKR 489
KKR
Sbjct: 549 KKR 551
>gi|342321329|gb|EGU13263.1| Endochitinase [Rhodotorula glutinis ATCC 204091]
Length = 703
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 174/403 (43%), Positives = 255/403 (63%), Gaps = 22/403 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT D+ +K L + L D ++ S EE R VLGRL+ +VK+++ R +++ G+
Sbjct: 12 ISVAPPTARDLEVSKTLIQELKDRGIYESAEEGRNREMVLGRLNKLVKEFVYRSSINHGL 71
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD + +EA K+FTFGSYRLGV GP +DID L V P + R ++FF +ML+ET V
Sbjct: 72 SDA-KAREAGGKIFTFGSYRLGVHGPGSDIDTLLVVPRHVER-EEFFSLFEQMLKETEGV 129
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
++T VP+A VP+IK F+G+ +DLL+A+L +P+DLD D+LL N+D++ + SLNG
Sbjct: 130 LEVTGVPEAFVPIIKCTFSGIDIDLLFARLAVPTVPDDLDLKDDNLLRNIDDRCLRSLNG 189
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD +L LVP++ FR LR ++ WA++R IY N MGF GG+ WA+LVAR+CQLYP
Sbjct: 190 SRVTDEMLRLVPDVPVFREALRTIKLWAQQRAIYGNVMGFCGGVAWAMLVARICQLYPKG 249
Query: 244 LPNVLVS--------------------RFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPR 283
++S RFF I W+WP PV+L PI+ + VW+P+
Sbjct: 250 CVGSIISRCVMCFQLRHVRSSPTGSLRRFFIIMHQWQWPAPVLLKPIEEGPLQVRVWNPK 309
Query: 284 SNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFE 343
DR H MPIITP+YP S++NV+ +T +IM EF+RA ++ +++ G W LF+
Sbjct: 310 LYPSDRSHRMPIITPAYPSMCSTHNVTLSTQQIMTAEFKRAADIVDKVFVGSAKWSELFQ 369
Query: 344 PYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIE 386
P+ FF ++ YLQI ++ +A +W G VESR+RQL+ +E
Sbjct: 370 PHDFFSKYRYYLQITASSGSADVQLKWSGTVESRIRQLVMKLE 412
>gi|260941482|ref|XP_002614907.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
gi|238851330|gb|EEQ40794.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
Length = 557
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 161/378 (42%), Positives = 245/378 (64%), Gaps = 6/378 (1%)
Query: 30 FASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGP 89
F SE+ + RVEVL +V++++ V+ +K +SD ++A K+FTFGSYRLGV GP
Sbjct: 38 FESEQATKKRVEVLTLFQNMVQEFVYTVSKNKNMSDG-MARDAGGKVFTFGSYRLGVYGP 96
Query: 90 STDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLL 149
+DID L V P + R +DFF +++++ P +E++T VPDA VP+IK +F+G+S+DL+
Sbjct: 97 GSDIDTLVVVPKHVGR-EDFFTVFEQIIRKRPELEEITSVPDAFVPIIKIEFDGISIDLI 155
Query: 150 YAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRF 209
Y++L +P D+ +LL N+DE+ + SLNG RVTD IL LVP F+ LRC++
Sbjct: 156 YSRLNVPRVPLDMTLEDKNLLKNIDEKDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKM 215
Query: 210 WAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCP 269
WA++R +Y N GF GG+ WA+L AR+CQLYPNA+ +V +FF I+ W WP PV+L P
Sbjct: 216 WAQQRAVYGNVFGFPGGVAWAMLTARICQLYPNAVGATIVEKFFTIYTKWNWPQPVLLKP 275
Query: 270 IQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCE 329
I+ + VW+PR DR+H MP+ITP+YP +++N++S+T +++ +E +R E+
Sbjct: 276 IEDGPLQVRVWNPRLYPHDRQHRMPVITPAYPSMCATHNITSSTQKVIMKELERGAEIMS 335
Query: 330 EIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGD--FRQWKGWVESRLRQLIHMIER 387
+ +G++TW LFE + FF +K YL I +AA A D +W G +ES+LR L+ +E
Sbjct: 336 LVASGEKTWADLFERHSFFHDYKFYLCI-VAATLADDEEHHKWSGMIESKLRILVQKLEV 394
Query: 388 DMGGVLQCRLYPGDFSEN 405
G+ Y DFS +
Sbjct: 395 -TDGIALAHPYVKDFSNS 411
>gi|17565368|ref|NP_505683.1| Protein PAP-1 [Caenorhabditis elegans]
gi|3880758|emb|CAA16309.3| Protein PAP-1 [Caenorhabditis elegans]
Length = 655
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 172/395 (43%), Positives = 245/395 (62%), Gaps = 8/395 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T L + L + +EE+ R+EVL L+ +VK+W+K VT K I
Sbjct: 18 ISLAHPDSKDIAQTTLLIETLKKFGSYEPKEETEQRMEVLRNLNRLVKEWVKNVTAMK-I 76
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ E + A KLFTFGSYRLGV DID L V P + R DFF ML P V
Sbjct: 77 PNGEGVN-AGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDR-SDFFTSFKEMLNNDPNV 134
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V +A VPV+K K++GV +D+L+A+L +P+ + D+LL NLD+++V SLNG
Sbjct: 135 TELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDNLLRNLDQESVRSLNG 194
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV +++L LVP + F TLR ++ WAK GIYSN+MGF GGI WA+LVAR CQLYPNA
Sbjct: 195 CRVAEQLLKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQLYPNA 254
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQ-----AMPHHVWDPRSNQRDRKHLMPIITP 298
P+ LV R F IF+ W WP+PV+L + + VWDPR DR H+MPIITP
Sbjct: 255 SPSRLVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVMPIITP 314
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIH 358
++P NS++NV+ +T +++ E A E+C +I GK W LFE +FF +K+++ +
Sbjct: 315 AFPEQNSTHNVTRSTATVIKNEICEALEICRDISEGKSKWTALFEEVNFFSRYKHFIALI 374
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVL 393
+AA N + + G++ESR+R L+ +ER+ ++
Sbjct: 375 MAAPNEEEELNYGGFLESRIRLLVQSLERNQDIII 409
>gi|296415646|ref|XP_002837497.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633369|emb|CAZ81688.1| unnamed protein product [Tuber melanosporum]
Length = 587
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 173/386 (44%), Positives = 240/386 (62%), Gaps = 5/386 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT +V + L + L + F EES RV VL L + + ++K+V +KG+
Sbjct: 15 ISVATPTDKEVERNQALIEELKKQGSFEGAEESQKRVLVLNTLQNLTEGFVKKVCANKGM 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE-TPL 122
E I+ + K+FT+GSYRLGV P +DID L V P + TRHD FF L MLQE P
Sbjct: 75 P-EHIIKNSGGKIFTYGSYRLGVYAPGSDIDTLLVTPAHITRHD-FFATLPAMLQELVPP 132
Query: 123 VEDLTPVPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
EDL+ VPDA VP+IKFK +S+DL++A+L + +P+D+ LL DE + L
Sbjct: 133 PEDLSMVPDAFVPIIKFKLQSISIDLIFARLANVNSVPKDMALSDKELLRGCDEVNLRCL 192
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RVTD IL+LVP FR LR ++ WA+RR IY+N MGF GG+ WA+LVAR+CQLYP
Sbjct: 193 NGTRVTDEILTLVPKPGVFRMALRGIKLWAQRRAIYANVMGFPGGVAWAMLVARICQLYP 252
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
A+ V++S+FFKI AHW WP PV+L I+ + VW+P+ DR HLMPIITP+YP
Sbjct: 253 MAVSAVVISKFFKILAHWTWPQPVLLKGIEDGPLSVRVWNPKIYPSDRGHLMPIITPAYP 312
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQIHIA 360
+++N++ +T I+ E + A E+ + I G +W LFE + FF ++ YL + A
Sbjct: 313 SMCATHNITKSTKSIIIREMKHAAEIMDGIMVGNLSWDKLFERHSFFTNGYRYYLSVVAA 372
Query: 361 AKNAGDFRQWKGWVESRLRQLIHMIE 386
AK+ W G VES+LR L+ +E
Sbjct: 373 AKDKDTLLGWSGLVESKLRHLVMKLE 398
>gi|146416103|ref|XP_001484021.1| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 169/388 (43%), Positives = 244/388 (62%), Gaps = 3/388 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT + L K L F +E + RVEVL L I ++++ RV+++K +
Sbjct: 12 ISTAEPTSKEKSLNDSLIKELRKRGSFENEAATKKRVEVLNTLQKITEEFVYRVSLNKNM 71
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E ++A K+FT+GSYRLGV GP +DID L V P + R DFF +L+E P +
Sbjct: 72 S-EGMARDAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVNR-TDFFTVFESLLRERPEL 129
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
E++ VPDA VP+IK +F G+S+DL+ A+L +P DL +LL NLDE+ + SLNG
Sbjct: 130 EEIASVPDAFVPIIKIEFGGISIDLICAKLDIGKVPRDLTLGDKNLLRNLDEKDLRSLNG 189
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL+LVP F+ LRC++ WA++R IY+N GF GG+ WA+L AR+CQLYPNA
Sbjct: 190 TRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANIFGFPGGVAWAMLTARICQLYPNA 249
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ V+V +FF I++ W WP PV+L I+ + VW+PR DR H MP+ITP+YP
Sbjct: 250 VSAVIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSM 309
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK- 362
+++N++S+T I+ EF+R E+ +I GK+ W LF + FF +K YL + + K
Sbjct: 310 CATHNITSSTQAIIVSEFKRGAEIMNDISIGKKEWGDLFARHEFFFRYKFYLCVVASTKG 369
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERDMG 390
+A + +W G VES+LR L+ +E G
Sbjct: 370 SAEEHLKWSGMVESKLRILVQKLELTEG 397
>gi|294657491|ref|XP_459799.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
gi|199432733|emb|CAG88038.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
Length = 571
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/388 (43%), Positives = 246/388 (63%), Gaps = 3/388 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT + L K L F SE + RVEVL L + ++++ V+++K +
Sbjct: 12 ISVANPTPKENSLNDSLIKELKSRGSFESEAATKKRVEVLHILQKLTEEFVYTVSINKNM 71
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+E ++A K+FTFGSYRLGV GP +DID L V P + TR DFF ++L++ P +
Sbjct: 72 -NEGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVTR-SDFFEVFDKILRKRPEL 129
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
E++ V DA VP+IK +F G+S+DL+ A+L IP+DL +LL N+DE+ + SLNG
Sbjct: 130 EEIASVSDAYVPIIKMEFGGISIDLICARLDIPRIPKDLKLDDKNLLRNIDEKDLRSLNG 189
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL+LVP F+ LRC++ WA++R IY+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 190 TRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQLYPNA 249
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ V+V +FF I+A W WP PV+L PI+ + VW+P+ DR+H MP+ITP+YP
Sbjct: 250 VSAVIVEKFFHIYAQWSWPQPVLLKPIEDGPLQVRVWNPKLYPHDRQHRMPVITPAYPSM 309
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++N++S+T +I+ +EF+R ++ +I K TW L + FF +K YL I A +
Sbjct: 310 CATHNITSSTQKIILDEFKRGIDIMSQISMNKSTWSDLLARHTFFYKYKFYLCIVAATQG 369
Query: 364 AG-DFRQWKGWVESRLRQLIHMIERDMG 390
+ D +W G VESRLR LI +E G
Sbjct: 370 SSEDHLKWGGMVESRLRLLIQKLEMTEG 397
>gi|1256822|gb|AAC52586.1| poly(A) polymerase III [Mus musculus]
Length = 375
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 174/349 (49%), Positives = 232/349 (66%), Gaps = 2/349 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L+ +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCLLTQKLIETLLPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 323
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFK 352
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K
Sbjct: 324 NSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYK 372
>gi|255732153|ref|XP_002551000.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
gi|240131286|gb|EER30846.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
Length = 558
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 167/401 (41%), Positives = 252/401 (62%), Gaps = 4/401 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PTV + L + L + F SE+ + RVEVL +V++++ V+ K +
Sbjct: 13 ISTANPTVKENALNDSLIQELKNRGSFESEQATKKRVEVLTLFQKLVQEFVYTVSKSKNM 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD +++ K+FTFGSYRLGV GP +DID L V P + TR DDFF ++++ P +
Sbjct: 73 SDG-MAKDSGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTR-DDFFSVFPDIIRKRPEL 130
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
E++ VPDA VP+IK +F+G+S+DL+ A+L +P ++ +LL NLDE+ + SLNG
Sbjct: 131 EEIACVPDAFVPIIKLEFDGISIDLIMARLNVPRVPLEMTLDDKNLLKNLDEKDLRSLNG 190
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVP F+ LRC++ WA++R +Y N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 191 TRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNVYGFPGGVAWAMLVARICQLYPNA 250
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ V+V +FF I+ W WP PV+L I+ + VW+PR DR H MP+ITP+YP
Sbjct: 251 VSAVIVEKFFSIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSM 310
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++N++S+T +++ +E R + +I G +TW LF+ + +F ++K YL + A +
Sbjct: 311 CATHNITSSTQKVILKELSRGSSIMNDINTGNKTWSDLFKRHEYFHAYKFYLCVVAATVD 370
Query: 364 AGD-FRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFS 403
+ ++W G+VESRLRQL+ +E G+ Y DFS
Sbjct: 371 TSEQHKKWSGFVESRLRQLVLKLEV-TDGIEFAHPYVKDFS 410
>gi|342870120|gb|EGU73417.1| hypothetical protein FOXB_16055 [Fusarium oxysporum Fo5176]
Length = 635
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 242/388 (62%), Gaps = 4/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS PT ++ + L + L +K F S E+ R EVL + I +++RV +K
Sbjct: 13 ISVQLPTEAELRQSDALLEELKRQKTFESPAETAKREEVLASIQTICDAFVRRVAQEKEP 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHD--DFFGKLFRMLQETP 121
+E I+ A K+FT+GSYRLGV GP +DID L V P Y TR D FF L +
Sbjct: 73 KNEVLIRNARGKVFTYGSYRLGVYGPGSDIDTLIVAPKYVTREDYFKFFPDLLLSMAPKD 132
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDS-LLHNLDEQTVLS 180
+ D+ V DA VP+IKF+++G+S+DL+++++ + D L+DS LL LDE + S
Sbjct: 133 AITDMAVVTDAFVPIIKFEYSGISIDLIFSRVIQKQLSPDFKDLKDSGLLRGLDEAELRS 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD IL+LVP F++ LR ++ WA+RR +Y+N MGF GG+ WA+LVARVCQLY
Sbjct: 193 LNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +V+V++FF + + W+WP PV+L PI+ +P +W+P+ + D HLMP+ITP+Y
Sbjct: 253 PKATFSVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRIWNPKLYKGDTYHLMPVITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQIHI 359
P +++N++ +++ I+ E +RA ++ E I GKR W LF + FF +K Y+ +
Sbjct: 313 PSMCATFNITRSSMAIINRELKRALQISESIMVGKRPWSDLFVKHTFFTAGYKYYISVTS 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
AAK W G+VES++R L+ +E+
Sbjct: 373 AAKTKEAHTIWSGYVESKVRMLVQKLEQ 400
>gi|324975502|gb|ADY62684.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 181/508 (35%), Positives = 286/508 (56%), Gaps = 41/508 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+ST+ PT ++ + L + L F SE + R EVL +V+ ++ V++ K +
Sbjct: 11 VSTADPTTKEISLNESLIQELKGRGSFESESATKKRAEVLSLFQTLVQQFVYEVSISKNM 70
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD ++A K+FTFGSYRLGV GPS+DIDAL V P + TR +DFF +++++ +
Sbjct: 71 SDG-MAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTR-EDFFTTFDKIIRQRSEL 128
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+++ V DA VP+IK +F+G+S+DL+ A+L +P D+ +LL NLDE+ + SLNG
Sbjct: 129 QEINGVSDAFVPIIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDERDLRSLNG 188
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVP F+ LRC++ WA+ R +Y N GF GG+ WA+L AR+CQLYPNA
Sbjct: 189 TRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTARICQLYPNA 248
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ V+V +FF I+ W WP PV+L I+ + VW+PR DR+H MP+ITP+YP
Sbjct: 249 VSAVIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRQHRMPVITPAYPSM 308
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIA-AK 362
+++N++S+T +++ +E R + + I G+++W LF + FF ++ YL + A ++
Sbjct: 309 CATHNITSSTQKVILQELTRGSNIMKSILEGEKSWSDLFARHDFFHRYRFYLCVVAATSE 368
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSV--------------- 407
+A + +W G+VES+LRQL+ +E GV Y DFS V
Sbjct: 369 SAEEHHKWHGFVESKLRQLVIKLE-STEGVELAHPYVKDFSNAYVLNDNNPNDVVNAYGS 427
Query: 408 --------------------KSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVV 447
K Y++GL + K D++ +F S +
Sbjct: 428 FSGQNLINSLEVLKNEGEENKVIRLTKYYIGLELNLDKRTEGVRKLDIQQPCADFYS-IC 486
Query: 448 WMYSSWKQGMQ-IHVSHLRCQDIPDFVF 474
++S+K G+ IH+ +++ D+PD V+
Sbjct: 487 KSFASYKDGITFIHIKNVKLSDLPDDVY 514
>gi|340514098|gb|EGR44367.1| predicted protein [Trichoderma reesei QM6a]
Length = 620
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 162/388 (41%), Positives = 247/388 (63%), Gaps = 4/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT + ++ L + L +K F S ++ R VL L I +++++V ++
Sbjct: 13 ISVTLPTEAENRASDALLEELRRQKTFESPSDTEKRHAVLKSLQEICNEFVRKVAREREP 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHD--DFFGKLFRMLQETP 121
++ I+ A K+FT+GS+RLGV GP +DID L V P Y TR D ++F L +
Sbjct: 73 KNDILIKNARGKVFTYGSFRLGVYGPGSDIDTLIVAPKYVTREDYFNYFPDLLVSMAPPG 132
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDS-LLHNLDEQTVLS 180
+ DLT V DA VP+IKF+++G+S+DL+++++ I D DSL+DS LL LDE + S
Sbjct: 133 AITDLTVVKDAFVPIIKFEYSGISIDLIFSRIIQKQISPDFDSLKDSSLLRGLDEAELRS 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD IL LVP FR LR ++ WA+RR +Y+N MGF GG+ WA+LVARVCQLY
Sbjct: 193 LNGTRVTDEILDLVPEKSTFRLALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +V+V++FF + W+WP PV+L PI +P VW+P+ + D HLMP+ITP+Y
Sbjct: 253 PKATMSVIVNKFFLVIGQWRWPQPVLLKPIDSGPLPVRVWNPKVYKGDSFHLMPVITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS-FKNYLQIHI 359
P +++N++ +++ I+Q E +R E+ E+I GKR W LF + FF S ++ Y+ +
Sbjct: 313 PSMCATFNITRSSMTIIQRELRRGLEISEQIMVGKRPWSDLFVKHTFFTSGYRYYISVIS 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
A+K+ + W G+VES++R L+ +E+
Sbjct: 373 ASKDKEAHKIWSGYVESKVRMLVQKLEQ 400
>gi|344301689|gb|EGW31994.1| Poly(A) polymerase PAPalpha [Spathaspora passalidarum NRRL Y-27907]
Length = 556
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 195/541 (36%), Positives = 295/541 (54%), Gaps = 44/541 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT + L + L + F +E + R EVL +V++++ V+ K +
Sbjct: 12 ISTANPTPRENSLNDSLIQELKNRGSFENESATKKRAEVLALFQKMVQEFVYTVSKSKNM 71
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD ++A K+FTFGSYRLGV GP +DID L V P + TR +DFF +++++ P +
Sbjct: 72 SDG-MAKDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTR-EDFFTVFEQIIRKRPEL 129
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+++ VPDA VP+IK +F+G+S+DL+ A+L +P D+ +LL N+DE+ + SLNG
Sbjct: 130 QEIASVPDAFVPIIKIEFDGISIDLILARLNVPRVPLDMTLDDKNLLKNIDERDLRSLNG 189
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVP F+ LRC++ WA++R +Y N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 190 TRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNVFGFPGGVAWAMLVARICQLYPNA 249
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ V+V +FF I+ W WP PV+L PI+ + VW+PR DR H MP+ITP+YP
Sbjct: 250 VSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSM 309
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++N++S+T +++ E R E+ +I GK +W L E + FF +K YL I +AA
Sbjct: 310 CATHNITSSTQKVIMSELARGAEVMNQINLGKSSWSALLERHDFFHKYKFYLCI-VAATT 368
Query: 364 AGD--FRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSV-------------- 407
+ D +W G VES+LR L+ +E G+ Y DFS++ +
Sbjct: 369 SSDEEHLKWSGLVESKLRHLVLKLEV-TDGIELAHPYVKDFSDSYILGENNHMDVINSYG 427
Query: 408 ------------------KSSSQCH---YFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHV 446
+ Q H F+GL K + +K D++ EF
Sbjct: 428 TLSGESFLSTLQKPESGDNEAKQIHLTKLFVGLELKLSKPTEGVKKLDIQNPCSEFYGVC 487
Query: 447 VWMYSSWKQGMQIHVSHLRCQDIP-DFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKSES 505
+ +Q I + +++ D+P D G RP KS KKRK+ +S K +S
Sbjct: 488 KNAPTYNEQINFIQIKNVKLFDLPSDVYIEGEARPIKS--GKKRKKNVDSDSQKRPRSTM 545
Query: 506 S 506
S
Sbjct: 546 S 546
>gi|71031845|ref|XP_765564.1| poly(A) polymerase [Theileria parva strain Muguga]
gi|68352521|gb|EAN33281.1| poly(A) polymerase, putative [Theileria parva]
Length = 507
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 177/481 (36%), Positives = 273/481 (56%), Gaps = 15/481 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKR-VTMDKG 62
+S PT D+ +++EL +L L+ +EE R ++L L+ +++ +++R + +G
Sbjct: 19 VSHEGPTNNDLKASRELLNLLKSHNLYETEEGKKRREDILESLNRLLQQFVRRQAKITRG 78
Query: 63 ISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL 122
++D+E Q + KL TFGSYRLG+ P +DID LC+ P TR + FF + L +
Sbjct: 79 LTDQEASQ-VSGKLLTFGSYRLGIVAPDSDIDVLCLCPRSVTR-ESFFSDFYNTLNKVDG 136
Query: 123 VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLN 182
+ L VPDA PVIK F +S+D+L+A L + ++ L D++L N+++ TV S+N
Sbjct: 137 ISKLQAVPDAYTPVIKLYFYDISIDILFANLDAPTVSPHINVLDDNILRNMNDSTVRSIN 196
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
GCRV IL VPN FR+TLR ++ WA RR IYS +G+LGG+ WA+L ARVCQLYPN
Sbjct: 197 GCRVASYILDSVPNKNYFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARVCQLYPN 256
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQ-----AMPHHVWDPRSNQRDRKHLMPIIT 297
PN L+ +FF++++ W+W PV LC I+ M VWDPR N +DR HLMPIIT
Sbjct: 257 CAPNQLIEKFFRVYSVWQWECPVTLCKIKEPPNIPGLMSFKVWDPRVNPQDRHHLMPIIT 316
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIE-AGKRTWITLFEPYHFFGSFKNYLQ 356
P++P NS++NV++TT R++ EE RA E+ + W + E F ++K++L
Sbjct: 317 PAFPSMNSTHNVTATTKRVITEELMRALEIFKTSNLTNVELWEKVLEEEDVFSNYKHFLV 376
Query: 357 IHIAAKNAG-DFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHY 415
I + N +W+GW+ SR+R LI +E ++G R PG F
Sbjct: 377 IEVYGSNEHVAHNKWEGWIGSRMRFLISRLE-NLGNTY-IRPIPGFFKFEDDNWDYASSA 434
Query: 416 FMGLGRKQGVSPQDGEKFDMRLTVEEFKSHV-VWM-YSSWKQGMQIHVSHLRCQDIPDFV 473
F GV + + D+R +V+ FK + W ++ + ++ HL+ +PD+V
Sbjct: 435 FFAFKVISGVV-ETSKTLDIRSSVQSFKDIINNWSDMEKYRDQISFNIKHLKNNQLPDYV 493
Query: 474 F 474
Sbjct: 494 L 494
>gi|429328821|gb|AFZ80581.1| poly A polymerase, putative [Babesia equi]
Length = 523
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 183/508 (36%), Positives = 292/508 (57%), Gaps = 22/508 (4%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKR-VTMD 60
E ++T P+ D+ +++E+ +L LF ++E R VL L+ +++ +++R +
Sbjct: 17 EPVTTQGPSNDDLKASEEITALLKSYNLFETDEGKQRRELVLEALNRLLQQFVRRQAKKN 76
Query: 61 KGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQET 120
+GIS E + + KL TFGSYRLG+ P +DID LC+ P TR + FF + L +
Sbjct: 77 QGIS-ESEANTISGKLLTFGSYRLGIVAPDSDIDVLCLCPKCVTR-ESFFSDFYISLTKV 134
Query: 121 PLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+ L VPDA PVIK + +S+D+L+A L + +++ L D++L N+++ TV S
Sbjct: 135 EAISKLQAVPDAYTPVIKLCYYDISIDILFANLDARTVNPNINVLDDNILRNMNDSTVRS 194
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
+NGCRV IL VPN NFR TLR ++ WA RR IYS +G+LGG+ WA+L ARVCQLY
Sbjct: 195 INGCRVASFILDSVPNKANFRMTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARVCQLY 254
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA-----MPHHVWDPRSNQRDRKHLMPI 295
PN +PN L+ +FF++++ W W PV LC I+ M VWDP++N DR+HLMPI
Sbjct: 255 PNYVPNQLIEKFFRVYSLWNWKIPVTLCKIKQVPNLPGFMSFKVWDPQNNPHDRQHLMPI 314
Query: 296 ITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGK-RTWITLFEPYHFFGSFKNY 354
ITP++P NS++NV++TT R+M +E +RA+++ + K + + E F S+K++
Sbjct: 315 ITPAFPSMNSTHNVTATTKRVMTDELKRARDILKSPNTPKNQLLELVLEEEDIFSSYKHF 374
Query: 355 LQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFS-ENSVKSSSQC 413
L I + + +W+GW+ SR+R LI +E Q R PG F E+S +
Sbjct: 375 LIIEVYGASEHAHGKWEGWIGSRMRFLIKKLENLPNT--QIRPLPGFFKFEDSEWEYASS 432
Query: 414 HYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVV-WM-YSSWKQGMQIHVSHLRCQDIPD 471
+F S Q + D+R +++ FK + W + K +++++ H++ +PD
Sbjct: 433 AFFALKCLSNDKSGQGSKVLDIRSSIQSFKDIINGWTDMENLKDQIKVNIRHVKSSQLPD 492
Query: 472 FVFPGGVRPPKSLNEKKRKRIEVIESTK 499
+V ++ N KKR E +E +K
Sbjct: 493 YV--------QAKNSKKRPLDEQLEKSK 512
>gi|159489342|ref|XP_001702656.1| poly(a) polymerase [Chlamydomonas reinhardtii]
gi|158280678|gb|EDP06435.1| poly(a) polymerase [Chlamydomonas reinhardtii]
Length = 407
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 168/391 (42%), Positives = 233/391 (59%), Gaps = 12/391 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
++ S P+ D + ELE+ L D L+ +E++ R EVLG + + W+K V K +
Sbjct: 15 LNNSLPSAEDKRHSAELEQFLRDAGLYEPDEDAYLRQEVLGLFYELTQTWVKGVCRKKNL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGK----LFRMLQE 119
+ +++A A ++TFGSYRLGV GP D+D L VGP Y R DFFG L ML +
Sbjct: 75 N----VEDARAHVYTFGSYRLGVHGPGADMDTLVVGPRYVLRDSDFFGSEKHCLEYMLSQ 130
Query: 120 TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVL 179
TP + D+ PVPDA VP+I K+ GV +D+LYA L +PE LD ++L DE TV
Sbjct: 131 TPDITDIQPVPDAFVPMIGIKYKGVQIDILYASLAMQTLPEQLDLSNHAVLRGCDEPTVR 190
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
+LNGCRVTD +L LVP FR+ LR ++ WA RGI SN G+LGG+N A++VA++CQL
Sbjct: 191 ALNGCRVTDTMLKLVPRQEVFRTALRAVKHWASLRGISSNVTGYLGGVNLAIMVAKICQL 250
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
YP A + ++ +FF + W WP + L + ++ VWDPR RD LMP+ITP+
Sbjct: 251 YPRAEASTVLLKFFILLKAWPWPRAIHLRIPEEHSLGLPVWDPRPGTRDSLALMPVITPA 310
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEI---EAGKRT-WITLFEPYHFFGSFKNYL 355
YP NS YNV +TL +M EEF A ++C GK W LF P FF Y+
Sbjct: 311 YPAMNSLYNVQRSTLEVMTEEFAAAADVCTSFLHCPPGKPIEWSRLFTPVPFFTQHSFYI 370
Query: 356 QIHIAAKNAGDFRQWKGWVESRLRQLIHMIE 386
Q+ ++A + GD W GWV SR+R+L+ +E
Sbjct: 371 QLEVSADSEGDLVLWDGWVSSRIRRLVRNLE 401
>gi|328772740|gb|EGF82778.1| hypothetical protein BATDEDRAFT_9489 [Batrachochytrium
dendrobatidis JAM81]
Length = 556
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 170/383 (44%), Positives = 248/383 (64%), Gaps = 2/383 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT ++ T++L + L D + SEEE+ R VLG++D I K++++ V++ G+
Sbjct: 31 ISENPPTEKEIACTEQLVQTLRDYGQYESEEEAQKREIVLGKIDAIFKEFVRSVSIKNGL 90
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E + K+FTFGSYRLGV G +DID LCV P + R +DF ++ +L+ V
Sbjct: 91 P-ESLANDVGGKIFTFGSYRLGVHGKKSDIDTLCVAPKHVKR-EDFLEYMYELLKARQEV 148
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
++T V DA VP+IK +F+ +S+DL++A+L + EDLD DSLL NLD++ + SLNG
Sbjct: 149 SEITAVADAYVPIIKLEFSDISIDLVFARLALPTVSEDLDLSDDSLLKNLDDRCIRSLNG 208
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVPN+ FR LRC++ WA +R IYSN MGF GG+ WA+L+ARVCQLYP A
Sbjct: 209 SRVTDDILRLVPNVETFRIALRCIKLWALQRAIYSNVMGFFGGVAWAILIARVCQLYPCA 268
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+VS+FF+I W+WP PV+L PI+ + VW+P+ +D+ H MPIITP+YP
Sbjct: 269 AAGEVVSKFFQIMYRWEWPLPVLLKPIEEGPLAVRVWNPKIYPQDKAHRMPIITPAYPSM 328
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
S++NV+ +T + +EF+RA ++I G+ W LF+ FF +K YLQ+ ++ +
Sbjct: 329 CSTHNVTVSTQTVTTQEFERAAVTTDKIMLGREKWTVLFQKNDFFHRYKYYLQVIASSND 388
Query: 364 AGDFRQWKGWVESRLRQLIHMIE 386
W G+VESRLRQL+ +E
Sbjct: 389 DEKQLMWAGFVESRLRQLVMKLE 411
>gi|448531596|ref|XP_003870285.1| Pap1 poly(A) polymerase [Candida orthopsilosis Co 90-125]
gi|380354639|emb|CCG24155.1| Pap1 poly(A) polymerase [Candida orthopsilosis]
Length = 557
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 172/408 (42%), Positives = 260/408 (63%), Gaps = 13/408 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDE----KLFASEEESLGRVEVLGRLDGIVKDWIKRVTM 59
IS + PT D KEL +L+ E + SE +L RVEVL L + +D++ V++
Sbjct: 17 ISLTDPTSKD----KELNDLLIKELKVRGSYESEAATLKRVEVLTTLQKLTEDFVYEVSL 72
Query: 60 DKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE 119
K ++ + ++A K+FTFGSYRLGV GPS+DIDAL V P + TR +DFF ++L+
Sbjct: 73 RKNMT-QGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTR-EDFFTVFEKILRG 130
Query: 120 TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVL 179
P +E++ V +A VP+IK +F G+S+DLL+A+L +P DL +LL N+DE+ +
Sbjct: 131 RPELEEINSVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEKDMR 190
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
+LNG RVTD IL LVP F++ LR ++ WA++R +Y+N GF GG+ WA+LVAR+CQL
Sbjct: 191 ALNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVARICQL 250
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
YPNA+ V++ +FF+I++ W WP PV+L I+ + VW+PR DR+H MP+ITP+
Sbjct: 251 YPNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPA 310
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
YP +++N++++T +I+ EF R E+ EI G++ W L E + FF +K YL +
Sbjct: 311 YPSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSFFHQYKFYLCVVA 370
Query: 360 AAK-NAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENS 406
A K NA + ++ G VES+LR L+ +E+ + GV Y F EN+
Sbjct: 371 ATKSNAEEHLKYSGMVESKLRLLVQKLEQ-VDGVELAHPYVKSF-ENA 416
>gi|4062995|dbj|BAA36217.1| poly(A) polymerase isozyme [Candida albicans]
Length = 555
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 235/358 (65%), Gaps = 3/358 (0%)
Query: 30 FASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGP 89
F SE + RVEVL L + ++++ +V++ K IS E ++ K+FTFGSYRLGV GP
Sbjct: 38 FESETATKKRVEVLNILQSMTEEFVYKVSIKKNIS-EGMARDVGGKIFTFGSYRLGVYGP 96
Query: 90 STDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLL 149
+DID L V P + +R +DFF + +L+ +E++ PVPDA VP+IK +F G+S+DL+
Sbjct: 97 GSDIDTLVVVPKHVSR-NDFFEVFYELLKGRSELEEIAPVPDAFVPIIKIEFAGISIDLI 155
Query: 150 YAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRF 209
+A+L +P DL +LL N+DE+ + +LNG RVTD IL LVP F+ LRC++
Sbjct: 156 FARLDIPRVPRDLTLDDKNLLKNIDEKDLRALNGTRVTDEILQLVPKPTVFKHALRCIKM 215
Query: 210 WAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCP 269
WA++R +Y N GF GG+ WA+LVAR+CQLYPNA+ V+V +FF I++ W WP PV+L
Sbjct: 216 WAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQ 275
Query: 270 IQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCE 329
I+ + VW+PR DR+H MP+ITP+YP +++N++S+T +++ EFQR EL
Sbjct: 276 IEDGPLQVRVWNPRLYALDRQHRMPVITPAYPSMCATHNITSSTQKVILSEFQRGIELMN 335
Query: 330 EIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNA-GDFRQWKGWVESRLRQLIHMIE 386
+I GK++W L E + FF +K YL I A ++ + ++ G VES+LR L+ +E
Sbjct: 336 DINVGKKSWSDLLERHDFFFRYKFYLCIVAATRSTYAEHLKYSGMVESKLRLLVQKLE 393
>gi|68482965|ref|XP_714613.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
gi|62900711|sp|Q9UW26.1|PAPA_CANAL RecName: Full=Poly(A) polymerase PAPa; AltName: Full=Polynucleotide
adenylyltransferase a
gi|5771506|gb|AAD51407.1| PAPa [Candida albicans]
gi|46436196|gb|EAK95563.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
Length = 555
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 235/358 (65%), Gaps = 3/358 (0%)
Query: 30 FASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGP 89
F SE + RVEVL L + ++++ +V++ K IS E ++ K+FTFGSYRLGV GP
Sbjct: 38 FESETATKKRVEVLNILQSMTEEFVYKVSIKKNIS-EGMARDVGGKIFTFGSYRLGVYGP 96
Query: 90 STDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLL 149
+DID L V P + +R +DFF + +L+ +E++ PVPDA VP+IK +F G+S+DL+
Sbjct: 97 GSDIDTLVVVPKHVSR-NDFFEVFYELLKGRSELEEIAPVPDAFVPIIKIEFAGISIDLI 155
Query: 150 YAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRF 209
+A+L +P DL +LL N+DE+ + +LNG RVTD IL LVP F+ LRC++
Sbjct: 156 FARLDIPRVPRDLTLDDKNLLKNIDEKDLRALNGTRVTDEILQLVPKPTVFKHALRCIKM 215
Query: 210 WAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCP 269
WA++R +Y N GF GG+ WA+LVAR+CQLYPNA+ V+V +FF I++ W WP PV+L
Sbjct: 216 WAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQ 275
Query: 270 IQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCE 329
I+ + VW+PR DR+H MP+ITP+YP +++N++S+T +++ EFQR EL
Sbjct: 276 IEDGPLQVRVWNPRLYALDRQHRMPVITPAYPSMCATHNITSSTQKVILSEFQRGIELMN 335
Query: 330 EIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNA-GDFRQWKGWVESRLRQLIHMIE 386
+I GK++W L E + FF +K YL I A ++ + ++ G VES+LR L+ +E
Sbjct: 336 DINVGKKSWSDLLERHDFFFRYKFYLCIVAATRSTYAEHLKYSGMVESKLRLLVQKLE 393
>gi|324975506|gb|ADY62687.1| PAPa [Candida orthopsilosis]
Length = 552
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/392 (42%), Positives = 253/392 (64%), Gaps = 11/392 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDE----KLFASEEESLGRVEVLGRLDGIVKDWIKRVTM 59
IS + PT D KEL +L+ E + SE +L RVEVL L + +D++ V++
Sbjct: 12 ISLTDPTSKD----KELNDLLIKELKVRGSYESEAATLKRVEVLTTLQKLTEDFVYEVSL 67
Query: 60 DKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE 119
K ++ + ++A K+FTFGSYRLGV GPS+DIDAL V P + TR +DFF ++L+
Sbjct: 68 RKNMT-QGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTR-EDFFTVFEKILRG 125
Query: 120 TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVL 179
P +E++ V +A VP+IK +F G+S+DLL+A+L +P DL +LL N+DE+ +
Sbjct: 126 RPELEEINSVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEKDMR 185
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
+LNG RVTD IL LVP F++ LR ++ WA++R +Y+N GF GG+ WA+LVAR+CQL
Sbjct: 186 ALNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVARICQL 245
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
YPNA+ V++ +FF+I++ W WP PV+L I+ + VW+PR DR+H MP+ITP+
Sbjct: 246 YPNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPA 305
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
YP +++N++++T +I+ EF R E+ EI G++ W L E + FF +K YL +
Sbjct: 306 YPSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSFFHQYKFYLCVVA 365
Query: 360 AAK-NAGDFRQWKGWVESRLRQLIHMIERDMG 390
A K NA + ++ G VES+LR L+ +E+ G
Sbjct: 366 ATKSNAEEHLKYSGMVESKLRLLVQKLEQVDG 397
>gi|384497599|gb|EIE88090.1| hypothetical protein RO3G_12801 [Rhizopus delemar RA 99-880]
Length = 500
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/485 (37%), Positives = 273/485 (56%), Gaps = 43/485 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S PT D+ TKEL+K L+ L+ SEE + R VL LD + K +++ V +G
Sbjct: 18 LSLEGPTEYDIHLTKELQKTLMLYGLYDSEETAKLREHVLKSLDEMTKKFVQFVYERQGF 77
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E+ ++ A K+FT+GSYRLGV +++ +
Sbjct: 78 SKEQAVK-AGGKIFTYGSYRLGVNAKASN----------------------------EQI 108
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+D+TPV DA VPVIKFK++G+ +D + A+L I ED+D +L LD ++ S+NG
Sbjct: 109 KDITPVTDAFVPVIKFKYSGIPIDFVCARLNLEEISEDIDLKDPEILRGLDAHSIRSING 168
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RV D ILSLVPN+ FR+TLRC++ WA R+ +YSN +GFLGG+ WA+LVARVCQLYP+A
Sbjct: 169 TRVADDILSLVPNMDTFRATLRCIKLWATRKAVYSNVLGFLGGVAWAILVARVCQLYPHA 228
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHV--WDPRSNQRDRKHLMPIITPSYP 301
+ L+S+FF I W WP+PVML ++ + W+P+ N DR H MP+ITPSYP
Sbjct: 229 SASTLISKFFHILTSWSWPSPVMLKAVEDGPAFANTKPWNPKLNPTDRSHRMPVITPSYP 288
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA 361
+++NV+ +T RI+ E ++A ++ ++I AG W LFE + FF ++ YLQI + A
Sbjct: 289 SMCTTHNVTQSTQRIITGEIKQAAKIVDKIMAGSAKWPQLFEAHSFFKMYRQYLQITVVA 348
Query: 362 KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGR 421
N +W G VE+RLRQL+ +E + V+Q + FSE + +S + G
Sbjct: 349 DNYELQLKWTGLVEARLRQLVIKLEA-IHSVMQVHPFMDGFSETCLYRTSTDKVTVSQGE 407
Query: 422 KQGVSPQDGE---KFDMRLTVEEFKSHVVWMYSSWKQ----GMQIHVSHLRCQDIPDFVF 474
K + G+ + D+ + +EEFK M SW + M + + L D+P V
Sbjct: 408 KYDNNRTIGKMKMEVDVTIPIEEFKR----MCRSWTEYDYRHMGVEIDRLEQSDLPKDVT 463
Query: 475 PGGVR 479
G R
Sbjct: 464 ALGKR 468
>gi|322709453|gb|EFZ01029.1| Poly(A) polymerase [Metarhizium anisopliae ARSEF 23]
Length = 572
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 163/388 (42%), Positives = 242/388 (62%), Gaps = 4/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS PT + ++ L + L +K F S ++ R +VL L I +++KRV +K
Sbjct: 13 ISVGLPTEAEKRASDALIEELRRQKTFESPSDTQKRYKVLESLQAICDEFVKRVAREKEP 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
++ I+ A K+FT+GS+RLGV GP +DID L V P Y TR D F F L +
Sbjct: 73 KNDVLIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTREDYFKYFPDLLEAMAPKG 132
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDS-LLHNLDEQTVLS 180
+ DL V DA VP+IKF+++G+S+DL+++++ + D LQDS LL LDE + S
Sbjct: 133 AITDLAAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFQDLQDSGLLRGLDEAELRS 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD IL+LVP F+ LR ++ WA+RR +Y N MGF GG+ WA+LVARVCQLY
Sbjct: 193 LNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYGNIMGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +V+V++FF + + W+WP PV+L PI+ +P VW+P+ + D HLMP+ITP+Y
Sbjct: 253 PKAATSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPKIYKGDSFHLMPVITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS-FKNYLQIHI 359
P +++N+S +++ I+ E +R E+ E I GKR W LF + FF S +K Y+ +
Sbjct: 313 PSMCATFNISRSSMAIINRELRRGLEISESIMVGKRPWSDLFVKHTFFTSDYKYYISVIS 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
A+K+ W G+VES++R L+ +E+
Sbjct: 373 ASKSKEAHNVWSGYVESKVRMLVQKLEQ 400
>gi|46122023|ref|XP_385565.1| hypothetical protein FG05389.1 [Gibberella zeae PH-1]
Length = 624
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 240/388 (61%), Gaps = 4/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS PT ++ + L + L +K F S E+ R EVL + I +++RV +K
Sbjct: 13 ISVQLPTEAELRQSDALLEELKRQKTFESPAETAKREEVLASIQIICDAFVRRVAEEKEP 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
+E ++ A ++FT+GSYRLGV GP +DID L V P Y TR D F F L +
Sbjct: 73 KNEVLVRNARGRVFTYGSYRLGVYGPGSDIDTLIVAPRYVTREDYFKYFPDLLVSMAPKD 132
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDS-LLHNLDEQTVLS 180
+ D+ V DA VP+IKF++ G+S+DL+++++ + D L+DS LL LDE + S
Sbjct: 133 AITDMAVVTDAFVPIIKFEYFGISIDLIFSRIIQKQLAPDFKDLKDSGLLRGLDEAELRS 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD IL+LVP F++ LR ++ WA+RR +Y+N MGF GG+ WA+LVARVCQLY
Sbjct: 193 LNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A P V+V++FF + + W+WP PV+L PI+ +P VW+P+ + D HLMP+ITP+Y
Sbjct: 253 PKATPAVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGDTFHLMPVITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQIHI 359
P +++N++ +++ I+ E +RA ++ E I G R W LF + FF +K Y+ +
Sbjct: 313 PSMCATFNITRSSMTIINRELKRALQISESIMVGMRPWSDLFAKHSFFTAGYKYYISVIS 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
AAK W G+VES++R L+ +E+
Sbjct: 373 AAKTKESHTIWSGYVESKVRMLVQKLEQ 400
>gi|156405096|ref|XP_001640568.1| predicted protein [Nematostella vectensis]
gi|156227703|gb|EDO48505.1| predicted protein [Nematostella vectensis]
Length = 486
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/388 (45%), Positives = 249/388 (64%), Gaps = 5/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ TK LE+ L+ +F SE+E R+ VL +L+ +VK+WI V++ K +
Sbjct: 22 ISHAGPKPRDLELTKRLEEALIPYGVFESEDELQQRMIVLAKLNELVKEWIVEVSIKKNM 81
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E + K+FTFGS+RLGV DID L V P + R DFF + +L+ P V
Sbjct: 82 P-ENVAKTVGGKIFTFGSFRLGVHTKGADIDTLLVAPRHIDR-ADFFSSFYDLLKNHPDV 139
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V +A VPVIK F + VDLL+A+L IP++LD L ++LL NLD + V SLNG
Sbjct: 140 RELRAVENAFVPVIKLIFCDIEVDLLFARLASPEIPDNLDLLDENLLKNLDPKCVRSLNG 199
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL VPNI +FR TLR ++ WAK+ G+YSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 200 CRVTDEILRQVPNIESFRLTLRAVKLWAKKHGVYSNVLGFLGGVSWAILVARTCQLYPNA 259
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPI---QYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
+ L+ +FF +F+ W+WPNPV+L I + +WDPR+N DR HLMPIITP+Y
Sbjct: 260 AASTLLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGFQIWDPRTNPGDRYHLMPIITPAY 319
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIA 360
P N S++VS +T +IM +EF + E++ +GK W LF P +FF +K+Y+ + +
Sbjct: 320 PQQNFSFSVSMSTRKIMCDEFFIRLKNTEDVISGKANWDILFTPPNFFHKYKHYIVLSAS 379
Query: 361 AKNAGDFRQWKGWVESRLRQLIHMIERD 388
+ + +W G VES++R LI +E +
Sbjct: 380 SNTEEEHLEWIGLVESKVRLLISYLENN 407
>gi|403213836|emb|CCK68338.1| hypothetical protein KNAG_0A06840 [Kazachstania naganishii CBS
8797]
Length = 576
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 171/413 (41%), Positives = 251/413 (60%), Gaps = 14/413 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S PT + L + L E F SE E+ RV++L L + + ++ V+ + +
Sbjct: 13 VSVVGPTAPENKLNDLLIQELKSENSFESEAETATRVKILEVLQALTEKFVYTVSKRRNM 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD ++ K+FTFGSYRLGV GP +DID L V P + +R DDFF ++L+E P +
Sbjct: 73 SDG-MARDGGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSR-DDFFDVFDKLLRERPEL 130
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+++ PVPDA VP+IK KF+GVS+DLL A+L + +P+ L +LL NLDE+ + +LNG
Sbjct: 131 DEIAPVPDAFVPIIKIKFSGVSIDLLCAKLDIAQVPKTLTLSDKNLLRNLDEKDLRALNG 190
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVP FR LR ++ WA+RR +Y N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 191 TRVTDEILELVPKPIVFRIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLVARICQLYPNA 250
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
V+++RFFKI++ WKWP PV+L PI+ + VW+P+ +DR H MP+ITP+YP
Sbjct: 251 CSAVIINRFFKIYSDWKWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSM 310
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA-- 361
+++N++ +T I+ +E QR ++ +I K+TW LF+ + FF +K YL I +
Sbjct: 311 CATHNITESTKSIILQELQRGIQITNDIFTNKKTWNDLFKRHDFFYKYKFYLTITASTRE 370
Query: 362 -------KNAGDFR--QWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSEN 405
K GD + +W G VES+ R L+ +E + G+ Y F N
Sbjct: 371 HTGDDGEKTGGDEQHLKWSGLVESKARLLVMKLEA-LEGIKVAHPYVKPFESN 422
>gi|303388385|ref|XP_003072427.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
gi|303301567|gb|ADM11067.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
Length = 505
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 183/491 (37%), Positives = 293/491 (59%), Gaps = 28/491 (5%)
Query: 17 TKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKL 76
++E++ L + F ++E R VLG+L+ +V++++ R+ +G D E+ K+
Sbjct: 29 SEEMDMYLQERGFFEDDKEGQTRERVLGKLNFMVREFVARMGKGRGSGDGEKAY--GGKI 86
Query: 77 FTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPV 136
FTFGSYRLGV G TDIDALC+ P + TR +DFF + L+ P ++++T + DA VP+
Sbjct: 87 FTFGSYRLGVHGKGTDIDALCIVPRHVTR-NDFFTHFYEELKGDPNIKEVTKIEDAFVPI 145
Query: 137 IKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPN 196
IKF+F G+ +DL++A+L V+ + ++ L D+LL ++DE+ +LSLNG RVTD +L+LVPN
Sbjct: 146 IKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLKSMDEKCILSLNGSRVTDEMLNLVPN 205
Query: 197 IRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIF 256
+ F S LRC+++WAKRR +Y N G+ GG+ ++L VARVCQLYPNA +V +FF++F
Sbjct: 206 VNTFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLCVARVCQLYPNASSFSIVCKFFELF 265
Query: 257 AHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRI 316
+ WKWP PV+L P+ VWDP+ D+ H MP+ITP+YP +++NVS++T +
Sbjct: 266 SSWKWPTPVVLRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAYPSMCATHNVSNSTQHV 325
Query: 317 MQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVES 376
+ EF RA E+ E K + +F+ FF +K + +I + F +W+G+VES
Sbjct: 326 ISMEFARAHEILSSPE--KNDFRKIFDLSDFFSRYKLFAEILAMSTEEEGFPKWEGYVES 383
Query: 377 RLRQLIHMIERDMGGVLQCRLYPGDF---SEN------SVKSSSQC-HYFMGLGRKQGVS 426
++R L E + +L +P F EN ++ +C +F+ + V
Sbjct: 384 KVRILASKFEA-VDDILYAIPFPKAFRVAEENIGKIKYGMQDLKKCTAFFIAI----DVI 438
Query: 427 PQDGEKFDMRLTVEEFKSHVVWM--YSSWKQGMQIHVSHLRCQDIPDF--VFPGGVRPPK 482
P G+K + V+EF V +M Y ++ M+I ++ L+ +D+ +F VF G
Sbjct: 439 PVKGKKVVVEQQVKEF---VDFMNEYEGKERSMRIEINSLKKKDVQNFLRVFYGK-ENLT 494
Query: 483 SLNEKKRKRIE 493
S KR+R+E
Sbjct: 495 SDETGKRRRVE 505
>gi|410079098|ref|XP_003957130.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
gi|372463715|emb|CCF57995.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
Length = 567
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 165/385 (42%), Positives = 246/385 (63%), Gaps = 5/385 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+ST+ PT + L + L F +E+E+ RVEVL L + + ++ V+ K +
Sbjct: 13 VSTAGPTAAENKLNDGLIQELKRNNSFETEKETANRVEVLKLLQELAQRFVFNVSKKKNM 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD ++A K+FTFGSYRLGV GP +DID L V P + +R +DFF + +L+E +
Sbjct: 73 SDG-MAKDAGGKIFTFGSYRLGVHGPGSDIDTLVVVPKHVSR-EDFFTEFDSLLRERSEL 130
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+++ PVPDA VPVIK K G+S+DLL A+L + +PE L ++LL N+DE+ + +LNG
Sbjct: 131 DEIAPVPDAFVPVIKIKLRGISIDLLCAKLDIAQVPESLVLSDNNLLRNVDEKDLRALNG 190
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVP FR LR ++ WA+ R +Y+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 191 TRVTDEILELVPKPIVFRIALRAIKLWAQNRAVYANVFGFPGGVAWAMLVARICQLYPNA 250
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
V+++RFFKI + WKWP PV+L PI+ + VW+P+ +DR H MP+ITP+YP
Sbjct: 251 CSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSM 310
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++N++ +T +++ EEF R ++ +I + K++W LF + FF +K YL I A+
Sbjct: 311 CATHNITDSTKKVILEEFSRGIQITNDIFSSKKSWSDLFNKHEFFYKYKFYLTI-TASTR 369
Query: 364 AGD--FRQWKGWVESRLRQLIHMIE 386
A D +W G VES++R L+ +E
Sbjct: 370 ASDEEHLKWSGLVESKVRLLVLKLE 394
>gi|402890991|ref|XP_003908748.1| PREDICTED: poly(A) polymerase gamma [Papio anubis]
Length = 700
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 185/494 (37%), Positives = 274/494 (55%), Gaps = 53/494 (10%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 85 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V DA VPVIKF+F+G+ V
Sbjct: 143 RNLRAVEDAFVPVIKFEFDGIEVR------------------------------------ 166
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 167 CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 226
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 227 AASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 286
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 287 NSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAST 346
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 347 EENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGII 405
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 406 FRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---- 460
Query: 478 VRPPKSLNEKKRKR 491
P + +KK+K+
Sbjct: 461 ---PAEILQKKKKQ 471
>gi|367008660|ref|XP_003678831.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
gi|359746488|emb|CCE89620.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
Length = 582
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 173/391 (44%), Positives = 248/391 (63%), Gaps = 15/391 (3%)
Query: 5 STSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGIS 64
ST+A L+ +EL+K E F SE+E+ RV+VL L + ++++ RV+ K +S
Sbjct: 18 STAAENKLNDGLIQELKK----EGSFESEQETENRVKVLKTLQELTQEFVYRVSKKKNMS 73
Query: 65 DEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETPL 122
D ++A K+F +GSYRLGV GP +DID L V P + TR D F F +L R QE
Sbjct: 74 D-GMARDAGGKVFPYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDELLRGRQE--- 129
Query: 123 VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLN 182
+E++ VPDA VP+IK KF+G+S+DL+ A L + IP+ L +LL NLDE+ + +LN
Sbjct: 130 LEEIAAVPDAFVPIIKMKFSGISIDLICAHLDLAQIPQSLTLADKNLLRNLDEKDLRALN 189
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
G RVTD IL LVP FR LR ++ WA+RR IY+N GF GG+ WA+LVAR+CQLYPN
Sbjct: 190 GTRVTDEILELVPKPIVFRIALRAIKLWAQRRAIYANVFGFPGGVAWAMLVARICQLYPN 249
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
A V+++RFFKI + WKWP PV+L PI+ + VW+P+ +DR H MP+ITP+YP
Sbjct: 250 ACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPS 309
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK 362
+++N++ +T +++ E R + +I K+TW LF+ + FF +K YL + +AA
Sbjct: 310 MCATHNITESTKKVILGELGRGIRITNDIFTNKKTWADLFQRHTFFHEYKFYLTV-MAAT 368
Query: 363 NAGDFRQ---WKGWVESRLRQLIHMIERDMG 390
N GD Q W G VES++R L+ +E G
Sbjct: 369 N-GDSEQHLKWSGMVESKVRLLVLKLEALTG 398
>gi|358383352|gb|EHK21019.1| hypothetical protein TRIVIDRAFT_78180 [Trichoderma virens Gv29-8]
Length = 575
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 194/551 (35%), Positives = 303/551 (54%), Gaps = 74/551 (13%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGR----VEVLGRLDGIVKDWIKRVTM 59
IS + PT + ++ L + L +K F S ++ R +VL L I +++++V
Sbjct: 13 ISVTLPTEAEKRASDALIEELRRQKTFESPSDTDKRHSFRYKVLASLQEICNEFVRKVAR 72
Query: 60 DKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRML 117
+K +E I+ A K+FT+GS+RLGV GP +DID L V P Y TR D F F L +
Sbjct: 73 EKEPKNEILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTREDYFKHFPDLLVSM 132
Query: 118 QETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDS-LLHNLDEQ 176
+ DLT V DA VP+IKF+++ +S+DL+++++ I D D+L+DS LL LDE
Sbjct: 133 APPGSITDLTVVTDAFVPIIKFEYSDISIDLIFSRIIQKQISPDFDNLKDSSLLRGLDEA 192
Query: 177 TVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARV 236
+ SLNG RVTD IL+LVP F+ LR ++ WA+RR +Y+N MGF GG+ WA+LVARV
Sbjct: 193 ELRSLNGTRVTDEILALVPEESTFKLALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARV 252
Query: 237 CQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPII 296
CQLYP A +V+V++FF + W+WP PV+L PI +P VW+P+ + D HLMP+I
Sbjct: 253 CQLYPKAATSVIVNKFFLVIGQWRWPQPVLLKPIGSGPLPVRVWNPKVYKGDSFHLMPVI 312
Query: 297 TPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS-FKNYL 355
TP+YP +++N++ +++ ++Q E +R E+ E+I GKR W LF + FF S ++ Y+
Sbjct: 313 TPAYPSMCATFNITRSSMSVIQRELRRGLEISEQIMVGKRPWSDLFVKHTFFTSGYRYYI 372
Query: 356 QIHIAAKNAGDFRQWKGWVESRLRQLI----------------------------HMIER 387
+ A+K+ + W G+VES++R L+ H IE+
Sbjct: 373 SVVSASKDKEAHKVWSGYVESKVRMLVQKLEQHPSIALAHAFNKGYDRRHRCKNDHEIEQ 432
Query: 388 DMGGVLQCRLYPGDFSEN------------SVKSSSQCH-----YFMGLGRKQGVSPQDG 430
G L+ + S++ S ++SS +++GL ++G
Sbjct: 433 VQEGSLEFMIKEESGSQSGEIEPKPEVKDGSAETSSPVEVFTTTHYIGLELEEG-----A 487
Query: 431 EKFDMRLTVEEFKSHVVWMYSSWKQ-------GMQIHVSHLRCQDIPDFVF-PGGVRP-- 480
+ D+ V+EFK + + WK+ + + V H+R ++PD VF PG +P
Sbjct: 488 KSLDLSYQVDEFKV----LCTQWKKYQEELQPSVSLGVQHVRNFNLPDDVFDPGEEKPQK 543
Query: 481 --PKSLNEKKR 489
KS+ KKR
Sbjct: 544 KSAKSMANKKR 554
>gi|346322043|gb|EGX91642.1| Poly(A) polymerase [Cordyceps militaris CM01]
Length = 608
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 245/388 (63%), Gaps = 4/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS S PT ++ ++ L + L +K F S ++ R VL L I +++K+V +K
Sbjct: 13 ISVSLPTEIEKRVSESLIEELRRQKTFESPSDTQNRFTVLESLQIITDEFVKKVAREKEP 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
++ I+ A K+FT+GS+RLGV GP +DID L V P Y TR D F F L +
Sbjct: 73 KNDILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTREDYFKYFPDLLTEMAPKD 132
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDS-LLHNLDEQTVLS 180
+ D+T V DA VP+IKF+++G+S+DL+++++ + D L+DS L LDE + S
Sbjct: 133 SITDITAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFTDLRDSGFLRGLDEAELRS 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD ILSLVP FR LR ++ WA+RR +Y N MGF GG+ WA+LVARVCQLY
Sbjct: 193 LNGTRVTDEILSLVPEQSTFRLALRAIKLWAQRRAVYGNIMGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +V+V++FF + + W+WP PV+L PI+ +P VW+P+ + D HLMPIITP+Y
Sbjct: 253 PKAATSVIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGDSFHLMPIITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS-FKNYLQIHI 359
P +++N++ +++ I++ E QR E+ E++ GK+ W LF + FF + +K Y+ +
Sbjct: 313 PSMCATFNITRSSMSIIKRELQRGLEISEQVMVGKQPWSDLFVKHTFFTTGYKYYISVVS 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
A+K + W G++ES++R L+ +E+
Sbjct: 373 ASKAKEPHKLWAGYIESKVRMLVQKLEQ 400
>gi|320038983|gb|EFW20918.1| Poly(A) polymerase [Coccidioides posadasii str. Silveira]
Length = 590
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 194/542 (35%), Positives = 292/542 (53%), Gaps = 38/542 (7%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT ++ L L + F + E+ R ++L + + +++K V KG+
Sbjct: 15 ISTALPTPSELAENDNLIAELKRQNNFEAPSETEKRNQMLHLIQRVTVEFVKTVGRRKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
S + I + K+F +GSYRLGV GP +DID L VGP + D F F L
Sbjct: 75 S-QAAIDVSGGKIFPYGSYRLGVYGPGSDIDTLVVGPKHVAIEDFFLDFPPTLERLAPKD 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
+E LTPVPDA VP+IK + +G+S+DL++A+L IP DLD LL LDE+ + +
Sbjct: 134 SIEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNKELLRGLDEREIRCV 193
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RVTD IL LVP + FR LR ++ WA+ R IYSN +GF GG+ WA+LVARVCQLYP
Sbjct: 194 NGTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGVAWAMLVARVCQLYP 253
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
A +V+V +FF+I +W WP PV+L PI+ + VW+P+ DR HLMPIITP+YP
Sbjct: 254 QATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYP 313
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHIA 360
+++NVS +T ++ E +R ++ E+I G+ W LF + FF +K YL I +
Sbjct: 314 SMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSKDYKYYLNITAS 373
Query: 361 AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYP-------------------GD 401
+ + W G VE++LR L+ +++ + +P G
Sbjct: 374 STSKEAQSVWSGLVEAKLRHLVIALDKK-ASIEVAHPFPKAHVAALESANGSINMPGLGQ 432
Query: 402 FSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQ---GMQ 458
E++ + Y++GL K V P D+ FK+ M +SW Q G+
Sbjct: 433 TEESNNHTLHTTTYYIGLELKPLV-PGASRSLDISSETHMFKN----MCTSWAQYQPGIN 487
Query: 459 -IHVSHLRCQDIPDFVF-PGGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKS 516
+ ++H+R D+P+ VF PG RP + K+K I+ +E T K+ + G + +
Sbjct: 488 DLTITHVRNYDLPEDVFHPGETRPVRP----KKKVIKKVEPTTTKRPIDAVDGQEIPENA 543
Query: 517 SQ 518
S+
Sbjct: 544 SK 545
>gi|302846120|ref|XP_002954597.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
gi|300260016|gb|EFJ44238.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
Length = 410
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 171/391 (43%), Positives = 234/391 (59%), Gaps = 12/391 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
++ + PT D +KELE+ L L+ S +E++ R EVLG +V+ W+K V + +
Sbjct: 15 LNDAPPTAEDKRHSKELEEFLRASGLYESLDEAILREEVLGLFYQLVQIWVKGVCRRRNL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGK----LFRMLQE 119
+ +++A A ++TFGSYRLGV GP +D+D L VGP Y R DFFG L +L +
Sbjct: 75 N----VEDARAHVYTFGSYRLGVHGPGSDMDTLVVGPRYVLREMDFFGNEKHCLQYLLSQ 130
Query: 120 TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVL 179
TP + D+ PVPDA VP+I K+ GV +D+LYA L +PE LD ++L DE TV
Sbjct: 131 TPDITDIQPVPDAFVPMIGIKYKGVQIDVLYASLAMVTLPEQLDLSNHAVLRGCDEATVR 190
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
SLNGCRVTD IL LVPN FR LR ++ WA RGI SN G+LGG+N A++VA++CQL
Sbjct: 191 SLNGCRVTDTILRLVPNQDVFRLALRAVKHWASLRGISSNVTGYLGGVNLAIMVAKICQL 250
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
YP A + ++ +FF + W WP + L + +M VWDPR RD LMP+ITP+
Sbjct: 251 YPRAEASTVLLKFFILLKAWPWPRAIHLRVPEDHSMGLPVWDPRPGTRDSLALMPVITPA 310
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEI---EAGK-RTWITLFEPYHFFGSFKNYL 355
YP NS YNV +TL +M EF A E+C G+ W LF P FF Y+
Sbjct: 311 YPAMNSLYNVQRSTLEVMTAEFAAAAEVCTSFLRCRGGQPLDWDRLFMPVPFFTQHTFYI 370
Query: 356 QIHIAAKNAGDFRQWKGWVESRLRQLIHMIE 386
QI ++A + D W GWV SR+R+L+ +E
Sbjct: 371 QIEVSADSEQDLVLWDGWVSSRIRRLVRNLE 401
>gi|63101121|gb|AAY33178.1| PAPa [Candida parapsilosis]
gi|354544642|emb|CCE41367.1| hypothetical protein CPAR2_303560 [Candida parapsilosis]
Length = 552
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 196/547 (35%), Positives = 306/547 (55%), Gaps = 50/547 (9%)
Query: 4 ISTSAPTVLDVISTKELEKILVDE-KL---FASEEESLGRVEVLGRLDGIVKDWIKRVTM 59
IS S PT + KEL +L+ E KL + SE +L RVEVL L + + ++ V++
Sbjct: 12 ISLSDPTSKE----KELNDLLIKELKLRGSYESESATLKRVEVLTTLQKLTEQFVYEVSL 67
Query: 60 DKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE 119
+ +S + ++A K+FTFGSY+LGV GPS+DIDAL V P + TR DDFF ++L+
Sbjct: 68 QRNMS-QGMAKDAGGKIFTFGSYKLGVYGPSSDIDALVVVPRHVTR-DDFFTVFEKILRG 125
Query: 120 TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVL 179
+E++ V +A VP+IK +F G+S+DLL+A+L +P DL +LL N+DE+ +
Sbjct: 126 RQELEEINCVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEKDMR 185
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
+LNG RVTD IL LVP F++ LR ++ WA++R IY+N GF GG+ WA+LVAR+CQL
Sbjct: 186 ALNGTRVTDEILRLVPKSTVFKNALRFVKMWAQQRAIYANVYGFPGGVAWAMLVARICQL 245
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
YPNA+ V++ +FF+I++ W WP PV+L I+ + VW+PR DR+H MP+ITP+
Sbjct: 246 YPNAVSAVILEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPA 305
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
YP +++N++S+T +I+ EF R E+ + +G+++W L E + FF +K YL +
Sbjct: 306 YPSMCATHNITSSTQKIIMSEFDRGVEIMNGVVSGQKSWSDLLERHDFFHKYKFYLCVVA 365
Query: 360 AAK-NAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSEN-SVKSSSQCHYFM 417
A K N + ++ G VES+LR L+ +E+ + GV Y F KS + H +
Sbjct: 366 ATKSNTEEHSKYSGMVESKLRLLVQKLEQ-VEGVELAHPYVKSFENGYQCKSDEEVHSIV 424
Query: 418 ---GLGRKQGVSPQ-------------------------------DGE-KFDMRLTVEEF 442
G R ++ Q DGE K D++ EF
Sbjct: 425 NAYGTSRGDEIATQLVSLNEPKAEDSTIEVNLTKLYIGLKLNLTKDGEKKLDIQYPCAEF 484
Query: 443 KSHVVWMYSSWKQGMQ-IHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLK 501
S + +S + M I + +++ D+ V+ G + P ++KR + + K +
Sbjct: 485 FS-ICKNWSEFDPSMHFIQIKNVKLYDLSSAVYIEGEQRPVKAAKRKRSLSKDVGKKKAR 543
Query: 502 KSESSTA 508
ES T+
Sbjct: 544 NLESITS 550
>gi|392579948|gb|EIW73075.1| hypothetical protein TREMEDRAFT_67196 [Tremella mesenterica DSM
1558]
Length = 648
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 183/517 (35%), Positives = 283/517 (54%), Gaps = 43/517 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST P D+ +++ L K L+ F SE+E R +L + +V ++ V++ G+
Sbjct: 12 ISTDPPRPSDIQASEALMKDLIALNQFESEQERKVRERLLSNIAQLVTKFVHDVSIKSGL 71
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E+ EA +++T GSYRLGV GP +DID +CV P + + + FFG+ ML+ P V
Sbjct: 72 S-EKVASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHVFK-EHFFGEFKEMLRAWPAV 129
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+++ V A VPV+K +GV VDLL+A++ + + LD +D +L +D+ + LNG
Sbjct: 130 TEISAVESAFVPVMKTVISGVEVDLLFARVNLAEAGDKLDLEKDEILRGVDDASQRGLNG 189
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL+LVP++ FR+ LR +R WAKRRGIYSN +GF GG+ WALL AR+CQLYP A
Sbjct: 190 PRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTARICQLYPTA 249
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA--MPHHVWDPRSNQRDRKHLMPIITPSYP 301
P +V++FF IF W WPNPV+L I+ M H VW+P+ ++RD H MPIITP+YP
Sbjct: 250 APATIVAKFFPIFYQWGWPNPVLLKKIESGPPNMHHSVWNPKLDRRDMAHRMPIITPAYP 309
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGK-RTWITLFEPYHFFGSFKNYLQIHIA 360
+++N++++T+ +++ E RA ++ + I + +W+ LFE FF +K+Y+Q+ +
Sbjct: 310 SMCTTHNITASTMSVIKNEMLRAMQVTDRIMSNPGSSWMELFEQIDFFSMYKSYVQVIAS 369
Query: 361 AKNAGDFRQWKGWVESRLRQLIHMIERD---------MGGVLQCRL-------------- 397
A + + W G VESR+R L+ +E MGG+ L
Sbjct: 370 ASTSEGIKDWGGTVESRIRTLVQDLENSDNIITAHPQMGGISATFLCLTEEEQAAASQGE 429
Query: 398 --------YPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWM 449
P D + K+ +F+GL + G + L +
Sbjct: 430 LNVEAMKRTPEDVAGEDYKTVYTKSFFIGLDIAKRSKDGSGSRV---LNLLYPSKRFCAA 486
Query: 450 YSSW----KQGMQIHVSHLRCQDIPDFVFPGGVRPPK 482
SW +Q M + + + D+P + FP G+ PK
Sbjct: 487 CQSWDKYDEQEMSVILRPAKRNDLPFYCFPDGLPKPK 523
>gi|308510522|ref|XP_003117444.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
gi|308242358|gb|EFO86310.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
Length = 513
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 187/527 (35%), Positives = 294/527 (55%), Gaps = 57/527 (10%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS P D++ K L + L F EE+ RV+VL +L+ +VK WI +T+ +
Sbjct: 16 ISMDFPNKKDLLLNKSLTETLKSFNCFEPSEETSQRVKVLNKLNFLVKKWIHLLTITRIP 75
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
D +A KL FGSYRLGV +DID L + P + TR D ++
Sbjct: 76 MD----VDAGGKLIAFGSYRLGVHSSGSDIDTLVLAPRHVTRLDF-------------IL 118
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
E+ T A VP++ FK++G+ +DLL+A+L +P+++D D++L NLD ++V SLNG
Sbjct: 119 ENFT----AFVPIMTFKYSGIDIDLLFARLDMPTVPDNIDLSDDNILKNLDPESVRSLNG 174
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV +++L VPN F TLR ++ WAK GIYSNA+GF GGI WA+LVAR CQLYPNA
Sbjct: 175 CRVAEQLLKQVPNQSTFCETLRAVKLWAKNHGIYSNAIGFFGGIAWAILVARTCQLYPNA 234
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQ----YQAMPHHVWDPRSNQRDRKHLMPIITPS 299
P+ L+ + F +F+ W WP+PV+L ++ Q + VWDPR N DR HLMPIITPS
Sbjct: 235 APSKLIQKVFFVFSTWNWPSPVILKHMENRFDMQNLSQLVWDPRRNYADRLHLMPIITPS 294
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
+P NS++NVS +TL+++Q E + A ++CE ++ GK TW L E +FF +++ + + I
Sbjct: 295 FPEQNSTHNVSRSTLQVIQNEMKEAFKICEHVQKGKATWKDLLEETNFFCKYRHLIAVSI 354
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERDMG---GVLQCRLYPGDFSENSVKSSSQCHYF 416
A+ + + G+ ESR+RQL+ ++ER+ + R + F S + +F
Sbjct: 355 NAEKEKEDTDFAGFFESRIRQLVQLLERNSQVQIAQVNTRKFKAPF------SPGKSQWF 408
Query: 417 MGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQG-MQIHVSHLRCQDIPDFVFP 475
+GL Q + D+ ++ FK ++ + K G +QI ++++ + ++
Sbjct: 409 IGLEFIQA-----AKNLDLTEEIKRFKK-IIGNQAKEKIGTVQIDAAYVKKSKLITYI-- 460
Query: 476 GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESG 522
S E KR + +KK S +++ ++ + T+SG
Sbjct: 461 -------SAAELKRGKF-------MKKDTSPEKENANRKRPTTTQSG 493
>gi|322695698|gb|EFY87502.1| Poly(A) polymerase [Metarhizium acridum CQMa 102]
Length = 570
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 242/388 (62%), Gaps = 4/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS PT + ++ L + L +K F S ++ R +VL L I +++KRV +K
Sbjct: 13 ISVGLPTEAEKRASDALIEELRRQKTFESPSDTQKRFKVLESLQAICDEFVKRVAREKEP 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
++ I+ A K+FT+GS+RLGV GP +DID L V P Y TR D F F L +
Sbjct: 73 KNDVLIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTRDDYFKYFPDLLEAMAPKG 132
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDS-LLHNLDEQTVLS 180
+ DL V DA VP+IKF+++G+S+DL+++++ + D L+DS LL LDE + S
Sbjct: 133 AITDLAAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFQDLKDSGLLRGLDEAELRS 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD IL+LVP F+ LR ++ WA+RR +Y N MGF GG+ WA+LVARVCQLY
Sbjct: 193 LNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYGNIMGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +V+V++FF + + W+WP PV+L PI+ +P VW+P+ + D HLMP+ITP+Y
Sbjct: 253 PKAATSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPKIYKGDSFHLMPVITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS-FKNYLQIHI 359
P +++N+S +++ I+ E +R E+ E I GK+ W LF + FF S +K Y+ +
Sbjct: 313 PSMCATFNISRSSMAIINRELRRGLEISESIMVGKQPWSDLFVKHTFFTSDYKYYISVIS 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
A+K+ W G+VES++R L+ +E+
Sbjct: 373 ASKSKEAHNVWSGYVESKVRMLVQKLEQ 400
>gi|408391167|gb|EKJ70549.1| hypothetical protein FPSE_09302 [Fusarium pseudograminearum CS3096]
Length = 711
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 240/388 (61%), Gaps = 4/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS PT ++ + L + L +K F S E+ R EVL + I +++RV +K
Sbjct: 13 ISVQLPTEAELRQSDALLEELKRQKTFESPAETAKREEVLASIQIICDAFVRRVAEEKEP 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
+E ++ A ++FT+GSYRLGV GP +DID L V P Y TR D F F L +
Sbjct: 73 KNEVLVRNARGRVFTYGSYRLGVYGPGSDIDTLIVAPRYVTREDYFKYFPDLLVSMAPKD 132
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDS-LLHNLDEQTVLS 180
+ D+ V DA VP+IKF++ G+S+DL+++++ + D L+DS LL LDE + S
Sbjct: 133 AITDMAVVTDAFVPIIKFEYFGISIDLIFSRIIQKQLAPDFKDLKDSGLLRGLDEAELRS 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD IL+LVP F++ LR ++ WA+RR +Y+N MGF GG+ WA+LVARVCQLY
Sbjct: 193 LNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A P V+V++FF + + W+WP PV+L PI+ +P VW+P+ + D HLMP+ITP+Y
Sbjct: 253 PKATPAVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGDTFHLMPVITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQIHI 359
P +++N++ +++ I+ E +RA ++ E I G R W LF + FF +K Y+ +
Sbjct: 313 PSMCATFNITRSSMTIINRELKRALQISESIMVGMRPWSDLFAKHSFFTAGYKYYISVIS 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
AAK W G+VES++R L+ +E+
Sbjct: 373 AAKTKESHTIWSGYVESKVRMLVQKLEQ 400
>gi|321249627|ref|XP_003191515.1| polynucleotide adenylyltransferase [Cryptococcus gattii WM276]
gi|317457982|gb|ADV19728.1| Polynucleotide adenylyltransferase, putative [Cryptococcus gattii
WM276]
Length = 644
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 193/554 (34%), Positives = 304/554 (54%), Gaps = 47/554 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
I+T P D+ S++ L LV F S++E R +L + +V ++ V++ G+
Sbjct: 16 ITTDPPKPNDIKSSEALMADLVALNQFESDQERKVRERLLSNIAQLVAKFVHDVSIKLGM 75
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E+ EA +++T GSYRLGV GP +DID +CV P + R + FFG+ ML+ P V
Sbjct: 76 S-EKIASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHIYR-EHFFGEFQDMLRAWPAV 133
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+++ V A VPV+K +GV VDLL+A++ + LD +D +L +D+ + SLNG
Sbjct: 134 TEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDLLDIEKDEILRGVDDASQRSLNG 193
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL+LVP++ FR+ LR +R WAKRRGIYSN +GF GG+ WALL AR+CQLYP A
Sbjct: 194 PRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTARICQLYPAA 253
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA--MPHHVWDPRSNQRDRKHLMPIITPSYP 301
P +V +FF I+ W WP PV+L I M H VW+P+ ++RD+ H MP+ITP+YP
Sbjct: 254 APATIVGKFFPIYYQWNWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAYP 313
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEI-EAGKRTWITLFEPYHFFGSFKNYLQIHIA 360
S++N++S+T+ I+++E RA ++ +EI + +WI LFE FF +K Y+Q+ +
Sbjct: 314 SMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPGSSWIPLFEKVDFFSMYKTYVQVVAS 373
Query: 361 AKNAGDFRQWKGWVESRLRQLIHMIER---------DMGGV----------LQCRLYPGD 401
A + + W G VESR+R L+ +E +GGV Q G+
Sbjct: 374 ASTSDGIKDWSGMVESRIRTLVGDLENTDCIITAHPQVGGVNRVFYCLTEEEQAAASQGE 433
Query: 402 FSENSVKSSSQ------------CHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWM 449
+ + + + +F+GL ++ G ++ ++F + +
Sbjct: 434 LTAEMIDRTEEDVEGKEHRKIYTKSFFIGLEIEKKSKESGGRVLNLFYPSKKFCA----V 489
Query: 450 YSSWKQGMQIHVSHL----RCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKSES 505
+W + ++ +S + + ++P +VFP G+ PKS + KR++ E + S
Sbjct: 490 CQNWDKYNEMEMSVILRPAKRSELPPYVFPDGM--PKSKKKTKRQQQNGSEDAGMNDG-S 546
Query: 506 STAGHSSGQKSSQT 519
G S KS QT
Sbjct: 547 EGQGPSKRTKSEQT 560
>gi|400594797|gb|EJP62626.1| Poly(A) polymerase pla1 [Beauveria bassiana ARSEF 2860]
Length = 593
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 195/555 (35%), Positives = 304/555 (54%), Gaps = 67/555 (12%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFAS---EEESL-GRVEVLGRLDGIVKDWIKRVTM 59
IS S PT + ++ L + L +K F S ++SL R VL L I +++++V
Sbjct: 13 ISVSLPTENEKRISESLIEELRRQKTFESPSDTQKSLSNRHTVLESLQKITDEFVRKVAR 72
Query: 60 DKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRML 117
+K ++ I+ A K+FT+GS+RLGV GP +DID L V P Y TR D F F +L +
Sbjct: 73 EKEPKNDILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTREDYFKYFPELLAEM 132
Query: 118 QETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDS-LLHNLDEQ 176
+ DL V DA VP+IKF+++G+S+DL+++++ + D L+DS LL LDE
Sbjct: 133 APKDSITDLAAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFQDLKDSGLLRGLDEA 192
Query: 177 TVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARV 236
+ SLNG RVTD IL+LVP FR LR ++ WA+RR +Y N MGF GG+ WA+LVARV
Sbjct: 193 ELRSLNGTRVTDEILALVPEQSTFRLALRAIKLWAQRRAVYGNIMGFPGGVAWAMLVARV 252
Query: 237 CQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPII 296
CQLYP A +V+V++FF + + W+WP PV+L PI+ +P VW+P+ + D HLMPII
Sbjct: 253 CQLYPKAATSVIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGDSFHLMPII 312
Query: 297 TPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS-FKNYL 355
TP+YP +++N++ +++ I++ E QR E+ E++ GK++W LF + FF + +K Y+
Sbjct: 313 TPAYPSMCATFNITRSSMTIIKRELQRGLEITEQVMVGKQSWNDLFVKHTFFTTGYKYYI 372
Query: 356 QIHIAAKNAGDFRQWKGWVESRLRQLIHMIE---------------------RDMGGVLQ 394
+ A+K + W G++ES++R L+ +E +D + Q
Sbjct: 373 SVVSASKARDAHKLWSGYIESKVRMLVQKLEHHPHIALAHPFVKGYSRRHLCKDETQIEQ 432
Query: 395 CRLYPGDF---------SENSVKSSSQCHYFMGLGRKQ------------GVSPQDGEK- 432
+ DF E++ ++ Q G KQ G+ ++G K
Sbjct: 433 VQEGSLDFVVSDDVQLDGESNEQNGEQKEAAEGEAEKQTSSEVFTTTHYIGLELEEGAKS 492
Query: 433 FDMRLTVEEFKSHVVWMYSSWKQG-------MQIHVSHLRCQDIPDFVFPGGVRPP---- 481
D+ V+EFK + ++W++ + I V H+R ++PD VF + P
Sbjct: 493 LDLSYQVDEFKV----LCTAWQKYQDELKPLVSIGVQHVRNFNLPDDVFGADEKKPQKKS 548
Query: 482 -KSLNEKKRKRIEVI 495
K N KKR EV+
Sbjct: 549 SKGANGKKRGAAEVM 563
>gi|58258863|ref|XP_566844.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222981|gb|AAW41025.1| polynucleotide adenylyltransferase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 642
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 199/555 (35%), Positives = 307/555 (55%), Gaps = 49/555 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
I+T P D+ S++ L LV F S++E R +L + +V ++ V++ G+
Sbjct: 16 ITTDPPKPNDIKSSEALMADLVALNQFESDQERKVRERLLSNIAQLVAKFVHDVSIKLGM 75
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E+ EA +++T GSYRLGV GP +DID +CV P + R + FFG+ ML+ P V
Sbjct: 76 S-EKIASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHIYR-EHFFGEFQDMLRAWPAV 133
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+++ V A VPV+K +GV VDLL+A++ + LD +D +L +D+ + SLNG
Sbjct: 134 TEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDSLDIEKDEILRGVDDASQRSLNG 193
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL+LVP++ FR+ LR +R WAKRRGIYSN +GF GG+ WALL AR+CQLYP A
Sbjct: 194 PRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTARICQLYPAA 253
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA--MPHHVWDPRSNQRDRKHLMPIITPSYP 301
P +V +FF I+ W WP PV+L I M H VW+P+ ++RD+ H MP+ITP+YP
Sbjct: 254 APATIVGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAYP 313
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEI-EAGKRTWITLFEPYHFFGSFKNYLQIHIA 360
S++N++S+T+ I+++E RA ++ +EI + +WI LFE FF +K Y+Q+ +
Sbjct: 314 SMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPDSSWIPLFEKVDFFSMYKTYVQVVAS 373
Query: 361 AKNAGDFRQWKGWVESRLRQLIHMIER---------DMGGV----------LQCRLYPG- 400
A + + W G VESR+R L+ +E +GGV Q G
Sbjct: 374 ASTSDGIKDWSGMVESRIRTLVGDLENTDCIITAHPQVGGVNRVFYCLTEEEQAAASQGE 433
Query: 401 ------DFSENSVKSSSQ-----CHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWM 449
D +E VK+ +F+GL ++ G ++ ++F + +
Sbjct: 434 LTAEMIDRTEEDVKNREHRKIYTKSFFIGLEIEKKSKETGGRVLNLFYPSKKFCA----V 489
Query: 450 YSSWKQGMQIHVSHL----RCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKSES 505
+W + ++ +S + + ++P +VFP G+ PKS +KK KR + S ++
Sbjct: 490 CQNWDKYNEMEMSVILRPAKRSELPSYVFPDGM--PKS--KKKTKRQQQNGSGDAGMNDG 545
Query: 506 STA-GHSSGQKSSQT 519
S G S KS QT
Sbjct: 546 SEGQGPSKRTKSEQT 560
>gi|324975487|gb|ADY62671.1| PAPa [Candida metapsilosis]
Length = 547
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/508 (35%), Positives = 289/508 (56%), Gaps = 41/508 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT + + L L F SE + R EVL +V++++ V+ K +
Sbjct: 11 ISTADPTAKEFSLNESLIHELKGRGSFESESATKKRAEVLSLFQTLVQEFVYEVSKSKNM 70
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD ++A K+FTFGSYRLGV GPS+DIDAL V P + TR +DFF +++++ P +
Sbjct: 71 SDGMS-RDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTR-EDFFTTFDQIIRKRPEL 128
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+++ V DA VP+IK +F+G+S+DL+ A+L +P D+ +LL NLDE+ + SLNG
Sbjct: 129 QEINGVSDAFVPIIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDERDLRSLNG 188
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL LVP F+ LRC++ WA+ R +Y N GF GG+ WA+L AR+CQLYPNA
Sbjct: 189 TRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTARICQLYPNA 248
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ +V+V +FF I+ W WP PV+L I+ + VW+PR DR H MP+ITP+YP
Sbjct: 249 VSSVIVEKFFSIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRLHRMPVITPAYPSM 308
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIA-AK 362
+++N++S+T +++ +E R + + I G++TW LFE ++FF ++ YL + A
Sbjct: 309 CATHNITSSTQKVIIQELLRGASVMKSIFEGEKTWSDLFERHNFFHRYRFYLCVVAATVD 368
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF-------------------- 402
+A + +W G+VES+LRQL+ +E G+ Y DF
Sbjct: 369 SAEEHHKWHGFVESKLRQLVLKLE-STEGIEIAHPYVKDFSTVCELNNNSPLEVVGAYGT 427
Query: 403 -------SENSVKSSSQ--------CHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVV 447
S SV+S+ Y++GL + +K D++ +F ++
Sbjct: 428 FLGLDLISSLSVQSNDSEERKVIRLTKYYIGLDLNLDKPIEGVKKLDIQQPCSDF-YNIC 486
Query: 448 WMYSSWKQGMQ-IHVSHLRCQDIPDFVF 474
++S+K+ + IH+ +++ D+P+ V+
Sbjct: 487 KSFASFKEEINFIHIKNVKLSDLPNDVY 514
>gi|405117907|gb|AFR92682.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
grubii H99]
Length = 644
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 198/555 (35%), Positives = 306/555 (55%), Gaps = 49/555 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
I+T P D+ S++ L LV F S++E R +L + +V ++ V++ G+
Sbjct: 16 ITTDPPKPNDIKSSEALMADLVALNQFESDQERKVRERLLSNIAQLVAKFVHDVSIKLGM 75
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E+ EA +++T GSYRLGV GP +DID +CV P + R + FFG+ ML+ P V
Sbjct: 76 S-EKIASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHIYR-EHFFGEFQDMLRAWPAV 133
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+++ V A VPV+K +GV VDLL+A++ + LD +D +L +D+ + SLNG
Sbjct: 134 TEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDSLDIEKDEILRGVDDASQRSLNG 193
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL+LVP++ FR+ LR +R WAKRRGIYSN +GF GG+ WALL AR+CQLYP A
Sbjct: 194 PRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTARICQLYPAA 253
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA--MPHHVWDPRSNQRDRKHLMPIITPSYP 301
P ++ +FF I+ W WP PV+L I M H VW+P+ ++RD+ H MP+ITP+YP
Sbjct: 254 APATIIGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAYP 313
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEI-EAGKRTWITLFEPYHFFGSFKNYLQIHIA 360
S++N++S+T+ I+++E RA ++ +EI + +WI LFE FF +K Y+Q+ +
Sbjct: 314 SMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPDSSWIPLFEKVDFFSMYKTYVQVVAS 373
Query: 361 AKNAGDFRQWKGWVESRLRQLIHMIER---------DMGGV----------LQCRLYPG- 400
A + + W G VESR+R L+ +E +GGV Q G
Sbjct: 374 ASTSDGIKDWSGMVESRIRTLVGDLENTDCIITAHPQVGGVNRLFYCLTEEEQAAASQGE 433
Query: 401 ------DFSENSVKSSSQ-----CHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWM 449
D +E VK +F+GL ++ G ++ ++F + +
Sbjct: 434 LTAEMIDRTEEDVKDKEHRKIYTKSFFIGLEIEKKSKETGGRVLNLFYPSKKFCA----V 489
Query: 450 YSSWKQGMQIHVSHL----RCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKSES 505
+W + ++ +S + + ++P +VFP G+ PKS +KK KR + S ++
Sbjct: 490 CQNWDKYNEMEMSVILRPAKRSELPSYVFPDGM--PKS--KKKTKRQQQNGSGDAGMNDG 545
Query: 506 STA-GHSSGQKSSQT 519
S G S KS QT
Sbjct: 546 SEGQGPSKRTKSEQT 560
>gi|325190732|emb|CCA25225.1| predicted protein putative [Albugo laibachii Nc14]
Length = 539
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 180/474 (37%), Positives = 272/474 (57%), Gaps = 23/474 (4%)
Query: 18 KELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLF 77
+ L L D +LF + R VL ++D I+K++ +++GI +E Q ++ +L
Sbjct: 25 QSLIDTLKDLQLFEDGNRLMSRELVLKKVDKILKEFALHEAINEGI-EEMQAKKLRIQLK 83
Query: 78 TFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVI 137
TFGSYRLG P DID LC+ P + TR FF KL +L+ + V DL +P+A VPVI
Sbjct: 84 TFGSYRLGCHHPDADIDVLCLAPRHCTRVK-FFQKLPILLEVSSFVSDLHVIPNAFVPVI 142
Query: 138 KFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNI 197
KFK +G++VD+L++ L IPE ++ L D L+ LD+ +V SLNGCRVT++IL L+ +
Sbjct: 143 KFKVDGIAVDMLFSCLYLESIPEHINILDDQFLNGLDDVSVRSLNGCRVTEKILQLISHQ 202
Query: 198 RNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFA 257
FR TL +++WA+ RGIYSN +GFLGG+N A++ A+VCQLYP+ALP L+ +FF ++
Sbjct: 203 EYFRITLTAIKYWARNRGIYSNVLGFLGGVNLAIMAAKVCQLYPDALPPTLLIKFFHLYH 262
Query: 258 HWKWPNPVMLCP-IQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRI 316
W WPNP+ + P I + W+P+ +DR HLMPIITP YP NSSYNV S+TL +
Sbjct: 263 LWNWPNPLSITPCINPLQLGFPSWNPKVYPKDRLHLMPIITPCYPSINSSYNVMSSTLDV 322
Query: 317 MQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVES 376
M+ EF+ A + A +W L FF ++++LQ+ I++++ DF +W WVES
Sbjct: 323 MKTEFKNASLQVSNVRAKVLSWSELLTEASFFDKYRHFLQVQISSEDEEDFGRWVTWVES 382
Query: 377 RLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEK---- 432
RLR I + ++ R + F+ +K + +F+ L ++ P+D +
Sbjct: 383 RLRTF--FIRLEAIPFVRIRPFARFFNFQELKGAYISWFFVALDFQR---PEDKRQNAQE 437
Query: 433 ----FDMRLTVEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVFPGGVR 479
D V F +HV W++ M + V H+ IP +V R
Sbjct: 438 PELTIDFSDAVRAFANHV----DQWEERNSTMDLEVKHVVRSQIPAWVIDATYR 487
>gi|403220429|dbj|BAM38562.1| polyadenylate polymerase [Theileria orientalis strain Shintoku]
Length = 511
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/479 (35%), Positives = 275/479 (57%), Gaps = 14/479 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKR-VTMDKG 62
++T P+ D+ +++EL +L L+ ++E R EVL L+ +++ +++R V ++ G
Sbjct: 19 VTTEGPSKEDLKASQELIVLLKSYNLYETDEGKKRREEVLESLNRLLQQFVRRQVKINMG 78
Query: 63 ISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL 122
++D+E AKL TFGSYRLG+ P +DID C+ P TR + FF + L +
Sbjct: 79 LTDQEA-NSVTAKLLTFGSYRLGIVAPDSDIDVACLCPRGITR-EAFFSDFYNTLTKVEG 136
Query: 123 VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLN 182
+ L VPDA PVIK ++ +S+D+L++ L + +++ L + +L N+ + V S+N
Sbjct: 137 ITKLQSVPDAYTPVIKLYYHDISIDILFSNLDEPTVDPNINLLDNKILRNMSDSNVRSIN 196
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
GCRV IL VP NFR+TLR ++ WA RR IYS +G+LGG+ WA+L ARVCQ+YPN
Sbjct: 197 GCRVASFILDSVPKKGNFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARVCQMYPN 256
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA-----MPHHVWDPRSNQRDRKHLMPIIT 297
PN L+ +FFK+F+ W W PV LC I+ ++ M VWDP ++ +DR+HLMPIIT
Sbjct: 257 FAPNRLIEKFFKVFSMWNWIYPVTLCKIKRESGVPGLMSFKVWDPTNSLQDRQHLMPIIT 316
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIE-AGKRTWITLFEPYHFFGSFKNYLQ 356
P++P NS++NV++TT R++ EE RA +L + + W + E F +K++L
Sbjct: 317 PAFPSMNSTHNVTATTKRVVTEELSRAAQLLKTPNLTNTQLWEMVLEEEDVFSKYKHFLV 376
Query: 357 IHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYF 416
I + + +W+GW+ SR+R LI +E Q R PG F F
Sbjct: 377 IEVYGSSEHAHNKWEGWIGSRMRFLIKKLE--TLEYTQIRPLPGFFKFEDRDWEYASSAF 434
Query: 417 MGLGRKQGVSPQDGEKFDMRLTVEEFKSHV-VWM-YSSWKQGMQIHVSHLRCQDIPDFV 473
V + + FD+R+ ++ FK + W ++K + +++ +L+ + +PD++
Sbjct: 435 FAFKHTAPVV-EGYQSFDIRMPIQSFKEIINTWCDMETFKDQIDVNIRYLKSKQLPDYI 492
>gi|345563932|gb|EGX46915.1| hypothetical protein AOL_s00097g341 [Arthrobotrys oligospora ATCC
24927]
Length = 1294
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/407 (42%), Positives = 243/407 (59%), Gaps = 7/407 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS S PT ++ +L + L F S EES RV+VL RL I +D++K+V K
Sbjct: 696 ISHSMPTDQEIKVNNDLIEELKAMNSFESAEESQKRVDVLKRLQRITEDFVKQVYTSKN- 754
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHD--DFFGKLFRMLQ--- 118
+E A K+FT+GSYRLGV GP +DID L V P TR D F+ L + L
Sbjct: 755 QNELATNSAGGKVFTYGSYRLGVVGPGSDIDTLVVAPKLVTREDFFKFYPPLLKALNKPN 814
Query: 119 ETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTV 178
E ++E+L PVPDA VP+IKF +G+S+DL++ +L + +P D+ +LL LDE+ +
Sbjct: 815 EPQIIEELAPVPDAFVPIIKFVMSGISIDLIFCRLGVTQVPADMSLEDKNLLRGLDEKEL 874
Query: 179 LSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQ 238
SLNG RVTD IL+LVP F+ LR ++ WAK + IY N GF GG+ WA+LVAR+CQ
Sbjct: 875 RSLNGTRVTDEILTLVPAPAVFKHALRAIKIWAKCKAIYGNVYGFPGGVAWAMLVARICQ 934
Query: 239 LYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITP 298
LYP+A+ V+VS+FF+I W WP PV+L PI+ + VW+PR D+ HLMPIITP
Sbjct: 935 LYPSAVSAVIVSKFFRILGQWAWPQPVLLKPIEDGPLNVRVWNPRLYPSDKNHLMPIITP 994
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQI 357
+YP S++N++ +T + E +A ++ + I GK W LFE + FF +K YL +
Sbjct: 995 AYPSMCSTHNITPSTKAAILGEMAKAADIVDRIITGKGNWKQLFERHTFFTKDYKYYLAV 1054
Query: 358 HIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSE 404
+ +AK +W G VES++R L+ +E + R Y F +
Sbjct: 1055 NASAKEQEASVKWSGLVESKIRHLVMKLEMCNDVIASARPYVKPFEQ 1101
>gi|755872|gb|AAA64708.1| poly(A) polymerase [Xenopus laevis]
Length = 394
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/349 (48%), Positives = 230/349 (65%), Gaps = 2/349 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D T++L + L +F E+E R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 23 ISLATPKDTDCTLTQKLIETLKPYGVFEEEDELQHRILILGKLNNLVKEWIREISELKNL 82
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L++ V
Sbjct: 83 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFSSFYEKLKQQEEV 140
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 141 KDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 200
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI +FR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 201 CRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 260
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 261 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 320
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFK 352
NS+YNVS +T +M EEF++ + +EI K W LF+ +FF +K
Sbjct: 321 NSTYNVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQKYK 369
>gi|225677646|gb|EEH15930.1| Poly(A) polymerase PAPa [Paracoccidioides brasiliensis Pb03]
gi|226295198|gb|EEH50618.1| Poly(A) polymerase pla1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 164/387 (42%), Positives = 237/387 (61%), Gaps = 4/387 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT ++ + +L L + F S E+ R + L + + +++K V+ KG+
Sbjct: 15 ISTALPTPSEIAANDDLTTELKQQNNFESPSETERRKQTLHLIQRVTVEFVKVVSRRKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
S + I A K+FT+GSYRLGV GP +DID L VGP + + D F F L +
Sbjct: 75 S-QAAIDIAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFEDFFSDFPPLLEQMAPKG 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
+E LTPVPDA VP+IK + +G+S+DL+YA+L +P +LD LL LDE+ + +
Sbjct: 134 AIEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNKDLLRGLDEKEIRCV 193
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQLYP
Sbjct: 194 NGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYP 253
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
A +V+V +FF+I W WP PV+L PI+ + VW+P+ DR HLMPIITP+YP
Sbjct: 254 QATGSVIVGKFFRIMNQWNWPQPVLLKPIEEGPLQMKVWNPKIYHGDRYHLMPIITPAYP 313
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHIA 360
+++NVS +T ++ E +R ++ ++I G+ TW LF + FF +K YL I +
Sbjct: 314 SMCATHNVSLSTKAVLLRELKRGGDIVDKIFLGQLTWNDLFTRHTFFSQDYKYYLSITSS 373
Query: 361 AKNAGDFRQWKGWVESRLRQLIHMIER 387
++ W G VES+LR L+ ++R
Sbjct: 374 SRGKEAQSVWSGLVESKLRHLVGALDR 400
>gi|239835851|gb|ACS29263.1| pap1 [Clavispora lusitaniae]
Length = 547
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 167/410 (40%), Positives = 250/410 (60%), Gaps = 4/410 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + T ++ EL K L F SE + RVEVL + + ++++ V+ K +
Sbjct: 12 ISVANATPKEISLNDELIKELKIRGSFESENATKRRVEVLNIMQKLTEEFVYIVSKRKNM 71
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
SD ++A K+FTFGSYRLGV G +DID L V P + R D FF +L++ +
Sbjct: 72 SDG-MAKDAGGKIFTFGSYRLGVYGQGSDIDTLVVVPKHVNRQD-FFDVFVDLLKKRSEL 129
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
E++T VPDA VP+IK +F G+S+DL++A+L +P DL +LL NLDE+ + SLNG
Sbjct: 130 EEITSVPDAFVPIIKMEFGGISIDLIFAKLDIPRVPRDLTLDNKNLLKNLDEKDLRSLNG 189
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVTD IL+LVP F+ LRC++ WA++R IY+N GF GG+ WA+LVAR+CQLYPN
Sbjct: 190 TRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQLYPNT 249
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ V+V +FF+I++ W WP PV+L I+ + VW+PR DR+H MP+ITP+YP
Sbjct: 250 VSAVIVEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITPAYPSM 309
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK- 362
+++N++ +T ++ EF R + +I AG +W LFE + FF +K YL I A K
Sbjct: 310 CATHNITKSTKDVIMSEFNRGVNVMAQIHAGTASWGLLFERHRFFFQYKFYLCIVAATKS 369
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQ 412
++ + +W G +ES++R L+ +E G L Y F + V +S++
Sbjct: 370 SSAEHLKWSGMIESKVRLLVQKLELTEGITL-AHPYVKPFENSYVGTSAE 418
>gi|67517193|ref|XP_658478.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|40746747|gb|EAA65903.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|259488841|tpe|CBF88615.1| TPA: poly(A) polymerase Pap (AFU_orthologue; AFUA_1G15340)
[Aspergillus nidulans FGSC A4]
Length = 601
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 165/388 (42%), Positives = 243/388 (62%), Gaps = 6/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT ++ + +L L + F S E+ R +VL L + +++K V+ KG+
Sbjct: 17 ISTTLPTAQELSANDDLIAELKLQNNFESPAETERRKQVLQLLQRVTIEFVKVVSRKKGL 76
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP-- 121
S + ++ A K+FT+GSYRLGV GP +DID L +GP + DDFF + +L+
Sbjct: 77 S-QAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVLGPKHVV-IDDFFAEFPPLLESMAPQ 134
Query: 122 -LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
VE +TPVPDA VP+IK + +G+S+DL++A+L IP +LD + L LDE+ V S
Sbjct: 135 GAVEKITPVPDAFVPLIKLELSGISIDLIFARLIVPSIPLNLDLKNNDYLRGLDEKEVRS 194
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQLY
Sbjct: 195 LNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLY 254
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +V+V +FF+I W WP PV+L PI+ + VW+P+ DR HLMPIITP+Y
Sbjct: 255 PQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAY 314
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQIHI 359
P +++N+S +T ++ E QR ++ ++I A + TW LF+ + FF +K YL +
Sbjct: 315 PSMCATHNISMSTKAVILRELQRGGDIVDKIWAKQATWNDLFKKHSFFTNDYKYYLGVTA 374
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
+++ W G VES++R L+ ++R
Sbjct: 375 SSRTKEAESVWSGLVESKVRHLVGALDR 402
>gi|298708409|emb|CBJ48472.1| conserved unknown protein (Partial) [Ectocarpus siliculosus]
Length = 496
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 180/430 (41%), Positives = 260/430 (60%), Gaps = 16/430 (3%)
Query: 3 IISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKG 62
+IS P D+ +++ELEK L L+ + E S R VL L +VK+W ++ ++G
Sbjct: 14 VISDREPESKDLAASQELEKFLKAMGLYENAEGSKRRKAVLLMLLKLVKEWSGKIAAEEG 73
Query: 63 ISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL 122
+ D+E++ A K TFGSY LGV P DID LC+ P + +R + FF ++L+
Sbjct: 74 L-DKEEVSPATLK--TFGSYHLGVHTPDADIDVLCLAPRHCSR-ESFFTSFCQILRNHTE 129
Query: 123 VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLN 182
+++L PVP+A PVIKFK GVS+D+L+ L + +P + L +LD+ V SLN
Sbjct: 130 IDELFPVPEAYTPVIKFKAQGVSIDMLFCSLHYPKLPRLCNVHVQEHLRHLDDAGVRSLN 189
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
G RV + ILSLVPN + FR+TLR ++ WA+RRGIYSN +G LGG+NWA+LVA V Q YPN
Sbjct: 190 GVRVAELILSLVPNHQAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPN 249
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQ-------YQAMP---HHVWDPRSNQRDRKHL 292
A P+VL+++FF ++ WKWPN V L +Q + P H VW+P +N RD+ HL
Sbjct: 250 ASPSVLLTKFFLMYHRWKWPNHVSLNELQSLQETNVTEGHPFPLHAVWNPVANPRDKAHL 309
Query: 293 MPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFK 352
MPIITP+YP NSSYNV +R+++EE R + + I G W LFE FF F+
Sbjct: 310 MPIITPAYPAMNSSYNVGEPQMRLIREEIARGWRITKGISLGIANWANLFERSDFFWRFE 369
Query: 353 NYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIER-DMGGVLQ-CRLYPGDFSENSVKSS 410
Y+Q+ I+A++A D R W GW+ESR+R + +++ DM P + N+ +
Sbjct: 370 LYVQVDISARSAADHRLWFGWIESRMRSFLVCLDQIDMVEAYPFVNPLPNPYLTNAETGA 429
Query: 411 SQCHYFMGLG 420
+F+GLG
Sbjct: 430 VGNSFFIGLG 439
>gi|70996294|ref|XP_752902.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|66850537|gb|EAL90864.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|159131656|gb|EDP56769.1| poly(A) polymerase Pap [Aspergillus fumigatus A1163]
Length = 580
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 189/517 (36%), Positives = 287/517 (55%), Gaps = 42/517 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT ++ + +L L + F S E+ R +VL L + +++K V+ KG+
Sbjct: 15 ISTALPTPEELAANDDLISELKAQNNFESPAETERRKQVLQLLQRVTHEFVKVVSRKKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP-- 121
S ++ A K+FT+GSYRLGV GP +DID L VGP + DDFF +L++
Sbjct: 75 S-PAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVLI-DDFFSDFPPVLEKMAPP 132
Query: 122 -LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+E +TPVPDA VP+IK + +G+S+DL++A+L S +P +LD + L LDE+ V S
Sbjct: 133 GAIEKMTPVPDAFVPIIKLELSGISIDLIFARLIVSSVPLNLDLKNNDYLRGLDEKEVRS 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQLY
Sbjct: 193 LNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P+A +V+V +FF+I W WP PV+L PI+ + VW+P+ DR HLMPIITP+Y
Sbjct: 253 PHATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHI 359
P +++N+S +T ++ E QR ++ ++I + TW LF + FF +K YL I
Sbjct: 313 PSMCATHNISMSTKAVILRELQRGGDIVDKIFLKQLTWNDLFARHSFFTQDYKYYLSITA 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERD---------MGGVLQCRLYPGDFSENSVKSS 410
+++ W G VES++R L+ ++R G + + + +VK+
Sbjct: 373 SSRTKEAEAVWSGLVESKIRHLVGALDRKPTIAVAHPFPKGFERVHIVSNEEEAEAVKNG 432
Query: 411 SQCHYFMGLGRKQGVSPQDGEKFDMRLT-VEEFK------------SHVVWMYSSW---- 453
S + G + +D L+ VE + SH+++ + +
Sbjct: 433 STKYQDKGTKTETTDERKDAAHQAAALSGVENAEVEPVGEKSVNGDSHIIYTTTYYIGLE 492
Query: 454 ----KQGMQ-----IHVSHLRCQDIPDFVF-PGGVRP 480
+ G Q + ++H+R D+PD VF PG RP
Sbjct: 493 LKPLEPGYQPGINDLSITHVRNFDLPDDVFQPGETRP 529
>gi|121700911|ref|XP_001268720.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
gi|119396863|gb|EAW07294.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
Length = 598
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 167/388 (43%), Positives = 241/388 (62%), Gaps = 6/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT ++ + +L L + F S E+ R +VL L + +++K V+ KG+
Sbjct: 15 ISTALPTSDELAANDDLISELKTQNNFESPAETERRKQVLQLLQRVALEFVKVVSRKKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP-- 121
S ++ A K+FT+GSYRLGV GP +DID L VGP + DDFF +L++
Sbjct: 75 S-PAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVL-IDDFFSDFPPVLEKMAPP 132
Query: 122 -LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+E +TPVPDA VP+IK + +G+S+DL++A+L S +P +LD + L LDE+ V S
Sbjct: 133 GAIEKMTPVPDAFVPIIKMELSGISIDLIFARLIVSSVPLNLDLKNNDYLRGLDEKEVRS 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQLY
Sbjct: 193 LNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +V+V +FF+I W WP PV+L PI+ + VW+P+ DR HLMPIITP+Y
Sbjct: 253 PQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHI 359
P +++NVS +T ++ E QR ++ ++I + TW LF + FF +K YL I
Sbjct: 313 PSMCATHNVSMSTKAVILRELQRGGDIVDKIFLKQMTWNDLFARHSFFTQDYKYYLSITA 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
++K W G VES++R L+ ++R
Sbjct: 373 SSKTKEAESVWSGLVESKIRHLVGALDR 400
>gi|115397689|ref|XP_001214436.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
gi|114192627|gb|EAU34327.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
Length = 599
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 174/413 (42%), Positives = 246/413 (59%), Gaps = 7/413 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST PT ++ + +L L + F S E+ R EVL L + +++K V+ KG+
Sbjct: 15 ISTVLPTPDELAANDDLIAELKRQNNFESPAETEQRKEVLKLLQRVTIEFVKVVSRKKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP-- 121
S E ++ A K+FT+GSYRLGV GP +DID L VGP DDFF +L+
Sbjct: 75 S-EAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKQVL-IDDFFSDFPPVLERMAPP 132
Query: 122 -LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+E +TPVPDA VP+IK + +G+S+DL++A+L IP +LD + L LDE+ V S
Sbjct: 133 GAIEKMTPVPDAYVPIIKLELSGISIDLIFARLIIPSIPINLDLKNNDYLRGLDEREVRS 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQLY
Sbjct: 193 LNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +V+V +FF+I W WP PV+L PI+ + VW+P+ DR HLMPIITP+Y
Sbjct: 253 PQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQIHI 359
P +++NVS +T ++ E QR ++ ++I + TW LF + FF +K YL+I
Sbjct: 313 PSMCATHNVSMSTKNVILRELQRGGDMVDKIFMKQLTWNDLFARHSFFTKDYKYYLRITA 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQ 412
A+ W G VES++R L+ ++R + +P F V S+ Q
Sbjct: 373 ASTTKEADSVWSGLVESKIRHLVGALDRK-PTIAVAHPFPKGFERIHVVSNEQ 424
>gi|225561454|gb|EEH09734.1| poly(A) polymerase Pap [Ajellomyces capsulatus G186AR]
Length = 600
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 195/567 (34%), Positives = 298/567 (52%), Gaps = 78/567 (13%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + PT ++ + +L L + F + E+ R + L + + +++K V+ KG+
Sbjct: 15 VSNALPTPAEIAANDDLTTELKRQNNFEAPAETERRKQTLQLIQRVTVEFVKVVSRRKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
S + I A K+FT+GSYRLGV GP +DID L VGP + + D F F + +
Sbjct: 75 S-QAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFEDFFSDFPPILENMAPKG 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
+E LT VPDA VP+IK + +G+S+DL+YA+L +P +LD LL LDE+ + +
Sbjct: 134 AIEKLTSVPDAYVPIIKIELSGISIDLIYARLLVHSVPPNLDLRNKDLLRGLDEKEIRCV 193
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQLYP
Sbjct: 194 NGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYP 253
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
A + +V +FF+I WKWP PV+L PI+ + VW+P+ D+ HLMPIITP+YP
Sbjct: 254 QATGSAVVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYP 313
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHIA 360
+++NVS +T ++ E +R ++ ++I G+ +W LF + FF +K YL I A
Sbjct: 314 SMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFFSQDYKYYLNITSA 373
Query: 361 AKNAGDFRQWKGWVESRLRQLIHMIERD----------------------------MGGV 392
+++ W G VES+LR L+ ++R MGG
Sbjct: 374 SRSKDAQSVWSGLVESKLRHLVGALDRKSSIEIAHPFPKGFERIHICKDEKEIVEVMGGS 433
Query: 393 LQCRLYPGDFSENSVKSSSQCH-------------------------------YFMGLGR 421
++ + G +E + +S+ H Y++GL
Sbjct: 434 MKYQAK-GTKTETTDESNDPQHTAASQNGGEAIKMPETDHPNGDKGCTLYTTTYYIGLEL 492
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQ---GMQ-IHVSHLRCQDIPDFVF-PG 476
K V P D+ FKS +SW Q G+ ++++H+R D+P+ VF PG
Sbjct: 493 KPLV-PGASRSLDISADTHIFKSTC----TSWAQYQPGINDLNITHVRNYDLPEDVFQPG 547
Query: 477 GVRPPKSLNEKKRKRIEVIESTKLKKS 503
VRP + K+K ++ E T K++
Sbjct: 548 EVRPSRP----KKKVVKKSEPTAQKRN 570
>gi|401624879|gb|EJS42918.1| pap1p [Saccharomyces arboricola H-6]
Length = 569
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/383 (42%), Positives = 246/383 (64%), Gaps = 7/383 (1%)
Query: 5 STSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGIS 64
+T+A L+ +EL+K E F +E E+ RV+VL L + + ++ V+ K +S
Sbjct: 18 ATAAENKLNDSLVQELKK----EGSFETEHETANRVQVLKILQELAQRFVYEVSKKKNMS 73
Query: 65 DEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVE 124
D ++A K+FT+GSYRLGV GP +DID L V P + TR +DFF +L+E ++
Sbjct: 74 D-GMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDALLRERKELD 131
Query: 125 DLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGC 184
++ PVPDA VP+IK KF+G+S+DL+ A+L +P+ L +LL NLDE+ + +LNG
Sbjct: 132 EIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPQSLTLADKNLLRNLDEKDLRALNGT 191
Query: 185 RVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNAL 244
RVTD IL LVP FR LR ++ WA+RR +Y+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 192 RVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNAC 251
Query: 245 PNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTN 304
V+++RFF I + W WP PV+L PI+ + VW+P+ +DR H MP+ITP+YP
Sbjct: 252 SAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMC 311
Query: 305 SSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNA 364
+++N++ +T +++ +EF+R ++ +I + K++W LFE FF +K YL+I + +
Sbjct: 312 ATHNITESTKKVILKEFERGVQITNDIFSNKKSWANLFEKNDFFYRYKFYLEITAYTRGS 371
Query: 365 GD-FRQWKGWVESRLRQLIHMIE 386
+ +W G VES++R LI +E
Sbjct: 372 DEQHLKWGGLVESKVRLLIMKLE 394
>gi|149237693|ref|XP_001524723.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
gi|146451320|gb|EDK45576.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
Length = 587
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/388 (42%), Positives = 251/388 (64%), Gaps = 11/388 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDE-KL---FASEEESLGRVEVLGRLDGIVKDWIKRVTM 59
IS + PT D EL +L+ E KL F SE + RV+VL L + + ++ V+
Sbjct: 14 ISLANPTPKD----NELNDLLIKELKLRGSFESEAATRKRVKVLNTLQKLTETFVYNVSR 69
Query: 60 DKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE 119
K +S E ++A KLFTFGSYRLGV GPS+DIDAL V P Y TR +DFF + ++L+E
Sbjct: 70 SKNMS-EAMARDAGGKLFTFGSYRLGVYGPSSDIDALVVFPRYITR-EDFFTEFEKLLRE 127
Query: 120 TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVL 179
P +E++ V +A VP+IK +F+G+S+DL++A+L IP+DL +LL N+DE+ +
Sbjct: 128 RPELEEINSVREAFVPIIKLEFDGISIDLIFAKLDIPRIPKDLTLTDKNLLKNIDEKDLR 187
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
+LNG RVTD IL+LVP F+ LR ++ WA++R IY+N GF GG+ WA+LVAR+CQL
Sbjct: 188 ALNGTRVTDEILNLVPKPTVFKHALRFIKMWAQQRAIYANVYGFPGGVAWAMLVARICQL 247
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
YPNA+ + +V +FF+I++ W WP PV+L I+ + VW+P+ DR+H MP+ITP+
Sbjct: 248 YPNAVSSYIVEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPKLYSLDRQHRMPVITPA 307
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
YP +++N++++T +I+ +EFQR + I G + W+ L + + FF +K YL +
Sbjct: 308 YPSMCATHNITASTQKIILDEFQRGTTIMHGILDGTKNWLDLLQRHDFFHRYKFYLCVVA 367
Query: 360 AAKNA-GDFRQWKGWVESRLRQLIHMIE 386
A K+ + ++ G ES+LR L+ +E
Sbjct: 368 ATKSTYEEHLKYSGMFESKLRLLVQKLE 395
>gi|328351170|emb|CCA37570.1| poly(A) polymerase [Komagataella pastoris CBS 7435]
Length = 908
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/390 (41%), Positives = 245/390 (62%), Gaps = 11/390 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDE----KLFASEEESLGRVEVLGRLDGIVKDWIKRVTM 59
IST+ P+ + L +LVDE F SE +L R +VL L + ++++ V+
Sbjct: 368 ISTAGPSSEET----RLNDLLVDELRRQGSFESEAATLKRAKVLKTLQQLTQEFVYSVSK 423
Query: 60 DKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE 119
K + DE ++A K+FTFGSYRLGV GP +DID L V P + R +DFF ++L++
Sbjct: 424 SKNM-DEGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLVVFPKHINR-EDFFTVFEKILRQ 481
Query: 120 TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVL 179
P +E++ VPDA VP+IK +F+G+S+DL+ A+L +P +L +LL N+DE+ +
Sbjct: 482 RPELEEIQSVPDAFVPIIKMEFDGISIDLICARLDIPRVPLNLTLDDKNLLKNIDEKDLR 541
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
+LNG RVTD IL LVP F+ LR ++ WA+RR +Y N GF GG+ WA+LVAR+CQL
Sbjct: 542 ALNGTRVTDEILLLVPQPTVFKHALRAIKIWAQRRAVYGNVFGFPGGVAWAMLVARICQL 601
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
YPNA+ V++S+FF I W WP PV+L PI+ + VW+PR D+ H MP+ITP+
Sbjct: 602 YPNAVSAVIISKFFVILGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDKYHKMPVITPA 661
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
YP +++N++ +T +++ +EFQR + EI +G + W LF + FF +K YL +
Sbjct: 662 YPSMCATHNITESTKKVILQEFQRGSGIVTEIFSGAKKWSDLFTKHDFFRRYKFYLTVIA 721
Query: 360 AAKNAG-DFRQWKGWVESRLRQLIHMIERD 388
A K + + +++ G VES+LR L+ +E +
Sbjct: 722 ATKGSSEEQKKFAGMVESKLRLLVQKLENN 751
>gi|268558234|ref|XP_002637107.1| C. briggsae CBR-PAP-1 protein [Caenorhabditis briggsae]
Length = 653
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/392 (43%), Positives = 238/392 (60%), Gaps = 11/392 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST P D++ T +L L + +EE+ R+EVL L+ +VK+W+K+VT K
Sbjct: 18 ISTLRPDQKDIVMTDQLIATLKKFNSYEPKEETEKRMEVLRSLNRLVKEWVKKVTAIKIP 77
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E A KLFTFGSYRLGV DID L V P + R DFF ML++ P V
Sbjct: 78 SGEGA--NAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDR-TDFFTSFKEMLRQDPNV 134
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V +A VPV+K K++GV +D+L+A+L +P+ D D LL NLD+++V SLNG
Sbjct: 135 TELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQDLFDDQLLRNLDQESVRSLNG 194
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV + +L LVP + F LR ++ WAK GIYSN+MGF GGI+WA+LVAR CQLYPNA
Sbjct: 195 CRVAELLLKLVPRQKEFCIALRAIKLWAKNHGIYSNSMGFFGGISWAILVARACQLYPNA 254
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQ-----AMPHHVWDPRSNQRDRKHLMPIITP 298
+ +V R F IF+ W WP+PV+L + + +WDPR DR HLMPIITP
Sbjct: 255 SASRIVHRMFFIFSTWTWPHPVLLSALDQDRNDIPTLCDLIWDPRKKNSDRFHLMPIITP 314
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQI- 357
++P NS++NV+ +T I++ E E+C++I GK TW LF+ FF +K+Y+ I
Sbjct: 315 AFPEQNSTHNVTRSTCHIIRNEICEGLEICKDITEGKATWEDLFKEVKFFSRYKHYIGIS 374
Query: 358 -HIAAKNAGDFRQWKGWVESRLRQLIHMIERD 388
H W+ ++ESR+R L+ +ER+
Sbjct: 375 DHGYIHRRRGIELWR-FLESRIRLLVQSLERN 405
>gi|350638725|gb|EHA27081.1| hypothetical protein ASPNIDRAFT_46294 [Aspergillus niger ATCC 1015]
Length = 579
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 198/566 (34%), Positives = 302/566 (53%), Gaps = 54/566 (9%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST PT ++ + +L L + F S E+ R +VL + + +++K V+ KG+
Sbjct: 15 ISTVLPTPDELAANDDLITELKVQNNFESPAETERRKQVLQLIQRVTVEFVKTVSRKKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL- 122
S + ++ A K+FT+GSYRLGV GP +DID L VGP + DDFF +L++
Sbjct: 75 S-QAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVI-IDDFFSDFPPILEKMAAP 132
Query: 123 --VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+E +TPVPDA VP+IK + +G+S+DL++A+L IP +LD + L LDE+ V S
Sbjct: 133 GAIEKMTPVPDAYVPIIKLELSGISIDLIFARLIIPSIPMNLDLKNNDYLRGLDEREVRS 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQLY
Sbjct: 193 LNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +V+V +FF+I W WP PV+L PI+ + VW+P+ DR HLMPIITP+Y
Sbjct: 253 PQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQIHI 359
P +++NVS +T ++ E QR ++ ++I + W LF + FF +K YL I
Sbjct: 313 PSMCATHNVSMSTKAVILRELQRGGDIVDKIFLKQLRWEDLFARHTFFTKDYKYYLSITA 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSE----------NSVKS 409
+++ W G VES++R L+ ++R + +P F +VK+
Sbjct: 373 SSRTKEAESVWSGLVESKIRHLVGALDRK-ATIAIAHPFPKGFERVHRVSSEEEIEAVKT 431
Query: 410 SSQCHYFMGL----------GRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS------- 452
S + G Q + E D+ + MY++
Sbjct: 432 GSTKYQDKGTKTETTDEMKDAAHQAAAQNGAENTDVAAAENKPVDDTHVMYTTTYYIGLE 491
Query: 453 -------WKQGMQ-IHVSHLRCQDIPDFVF-PGGVRP--PKSLNEKK------RKRIEVI 495
++ G+ + ++H+R D+P+ VF PG RP PK KK ++ IE +
Sbjct: 492 LKPLEPGYQPGINDLAITHVRNFDLPEDVFQPGETRPTRPKKKIVKKAEISGQKRNIESL 551
Query: 496 ESTKLKKSESS---TAGHSSGQKSSQ 518
+ + KK++ + G+ + SSQ
Sbjct: 552 DVSARKKAKVAYEQRTGYHTNFDSSQ 577
>gi|134107007|ref|XP_777816.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260514|gb|EAL23169.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 643
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 199/556 (35%), Positives = 307/556 (55%), Gaps = 50/556 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
I+T P D+ S++ L LV F S++E R +L + +V ++ V++ G+
Sbjct: 16 ITTDPPKPNDIKSSEALMADLVALNQFESDQERKVRERLLSNIAQLVAKFVHDVSIKLGM 75
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E+ EA +++T GSYRLGV GP +DID +CV P + R + FFG+ ML+ P V
Sbjct: 76 S-EKIASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHIYR-EHFFGEFQDMLRAWPAV 133
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLN- 182
+++ V A VPV+K +GV VDLL+A++ + LD +D +L +D+ + SLN
Sbjct: 134 TEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDSLDIEKDEILRGVDDASQRSLNA 193
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
G RVTD IL+LVP++ FR+ LR +R WAKRRGIYSN +GF GG+ WALL AR+CQLYP
Sbjct: 194 GPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTARICQLYPA 253
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA--MPHHVWDPRSNQRDRKHLMPIITPSY 300
A P +V +FF I+ W WP PV+L I M H VW+P+ ++RD+ H MP+ITP+Y
Sbjct: 254 AAPATIVGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAY 313
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEI-EAGKRTWITLFEPYHFFGSFKNYLQIHI 359
P S++N++S+T+ I+++E RA ++ +EI + +WI LFE FF +K Y+Q+
Sbjct: 314 PSMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPDSSWIPLFEKVDFFSMYKTYVQVVA 373
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER---------DMGGV----------LQCRLYPG 400
+A + + W G VESR+R L+ +E +GGV Q G
Sbjct: 374 SASTSDGIKDWSGMVESRIRTLVGDLENTDCIITAHPQVGGVNRVFYCLTEEEQAAASQG 433
Query: 401 -------DFSENSVKSSSQ-----CHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVW 448
D +E VK+ +F+GL ++ G ++ ++F +
Sbjct: 434 ELTAEMIDRTEEDVKNREHRKIYTKSFFIGLEIEKKSKETGGRVLNLFYPSKKFCA---- 489
Query: 449 MYSSWKQGMQIHVSHL----RCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKSE 504
+ +W + ++ +S + + ++P +VFP G+ PKS +KK KR + S ++
Sbjct: 490 VCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGM--PKS--KKKTKRQQQNGSGDAGMND 545
Query: 505 SSTA-GHSSGQKSSQT 519
S G S KS QT
Sbjct: 546 GSEGQGPSKRTKSEQT 561
>gi|1709575|sp|P51006.1|PAPO3_XENLA RecName: Full=Poly(A) polymerase type 3; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|643648|gb|AAC59747.1| poly(A) polymerase type 3, partial [Xenopus laevis]
Length = 400
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 169/349 (48%), Positives = 228/349 (65%), Gaps = 2/349 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D T++L + L +F E+E R+ LG+L+ +VK+WI+ ++ K +
Sbjct: 23 ISLATPKDTDCTLTQKLIETLKPYGVFEEEDELQHRILSLGKLNNLVKEWIREISELKNL 82
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R D F + L++ V
Sbjct: 83 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDLFSSFYEKLKQQEEV 140
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 141 KDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 200
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI +FR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 201 CRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 260
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 261 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQ 320
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFK 352
NS+YNVS +T +M EEF++ + +EI K W LF+ +FF +K
Sbjct: 321 NSTYNVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQKYK 369
>gi|261191352|ref|XP_002622084.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239589850|gb|EEQ72493.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239612743|gb|EEQ89730.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis ER-3]
Length = 599
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 163/388 (42%), Positives = 241/388 (62%), Gaps = 6/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + PT ++ + ++L L + F + E+ R + L + + +++K V+ KG+
Sbjct: 15 VSNALPTPAEIAANEDLTAELKRQNNFEAPAETERRKQTLQLIQRVTVEFVKVVSRRKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE-TPL 122
S + I A K+FT+GSYRLGV GP +DID L VGP + + +DFF +L+ PL
Sbjct: 75 S-QAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVS-FEDFFSDFPPVLENMAPL 132
Query: 123 --VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+E LTPVPDA VP+IK + +G+S+DL+YA+L +P +LD LL LDE+ +
Sbjct: 133 GAIEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNKDLLRGLDEKEIRC 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
+NG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQLY
Sbjct: 193 VNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A + +V +FF+I WKWP PV+L PI+ + VW+P+ D+ HLMPIITP+Y
Sbjct: 253 PQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHI 359
P +++NVS +T ++ E +R ++ + I G+ TW LF + FF +K YL I
Sbjct: 313 PSMCATHNVSLSTKAVLLRELKRGGDIADRIFVGQLTWNDLFTRHTFFSQDYKYYLSITS 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
A+++ W G VES+LR L+ ++R
Sbjct: 373 ASRSKDAQSVWSGLVESKLRHLVGALDR 400
>gi|327357099|gb|EGE85956.1| Poly(A) polymerase PAPa [Ajellomyces dermatitidis ATCC 18188]
Length = 599
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 163/388 (42%), Positives = 241/388 (62%), Gaps = 6/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + PT ++ + ++L L + F + E+ R + L + + +++K V+ KG+
Sbjct: 15 VSNALPTPAEIAANEDLTAELKRQNNFEAPAETERRKQTLQLIQRVTVEFVKVVSRRKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE-TPL 122
S + I A K+FT+GSYRLGV GP +DID L VGP + + +DFF +L+ PL
Sbjct: 75 S-QAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVS-FEDFFSDFPPVLENMAPL 132
Query: 123 --VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+E LTPVPDA VP+IK + +G+S+DL+YA+L +P +LD LL LDE+ +
Sbjct: 133 GAIEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNKDLLRGLDEKEIRC 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
+NG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQLY
Sbjct: 193 VNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A + +V +FF+I WKWP PV+L PI+ + VW+P+ D+ HLMPIITP+Y
Sbjct: 253 PQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHI 359
P +++NVS +T ++ E +R ++ + I G+ TW LF + FF +K YL I
Sbjct: 313 PSMCATHNVSLSTKAVLLRELKRGGDIADRIFVGQLTWNDLFTRHTFFSQDYKYYLSITS 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
A+++ W G VES+LR L+ ++R
Sbjct: 373 ASRSKDAQSVWSGLVESKLRHLVGALDR 400
>gi|119494846|ref|XP_001264225.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
gi|119412387|gb|EAW22328.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
Length = 603
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 164/388 (42%), Positives = 242/388 (62%), Gaps = 6/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT ++ + +L L + F S E+ R +VL + + +++K V+ KG+
Sbjct: 15 ISTALPTSEELAANDDLISELKAQNNFESPAETERRKQVLQLIQRVTHEFVKVVSRKKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP-- 121
S ++ A K+FT+GSYRLGV GP +DID L VGP + DDFF +L++
Sbjct: 75 S-PAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVLI-DDFFSDFPPVLEKMAPP 132
Query: 122 -LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+E +TPVPDA VP+IK + +G+S+DL++A+L S +P +LD + L LDE+ V S
Sbjct: 133 GAIEKMTPVPDAFVPIIKLELSGISIDLIFARLIVSSVPLNLDLKNNDYLRGLDEKEVRS 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQLY
Sbjct: 193 LNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P+A +V+V +FF+I W WP PV+L PI+ + VW+P+ DR HLMPIITP+Y
Sbjct: 253 PHATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHI 359
P +++N+S +T ++ E QR ++ ++I + TW LF + FF +K YL I
Sbjct: 313 PSMCATHNISMSTKAVILRELQRGGDIVDKIFLKQLTWNDLFARHSFFTQDYKYYLSITA 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
+++ W G VES++R L+ ++R
Sbjct: 373 SSRTKEAEAVWSGLVESKIRHLVGALDR 400
>gi|254567353|ref|XP_002490787.1| Poly(A) polymerase [Komagataella pastoris GS115]
gi|238030583|emb|CAY68507.1| Poly(A) polymerase [Komagataella pastoris GS115]
Length = 551
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 161/390 (41%), Positives = 245/390 (62%), Gaps = 11/390 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDE----KLFASEEESLGRVEVLGRLDGIVKDWIKRVTM 59
IST+ P+ + L +LVDE F SE +L R +VL L + ++++ V+
Sbjct: 11 ISTAGPSSEET----RLNDLLVDELRRQGSFESEAATLKRAKVLKTLQQLTQEFVYSVSK 66
Query: 60 DKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE 119
K + DE ++A K+FTFGSYRLGV GP +DID L V P + R +DFF ++L++
Sbjct: 67 SKNM-DEGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLVVFPKHINR-EDFFTVFEKILRQ 124
Query: 120 TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVL 179
P +E++ VPDA VP+IK +F+G+S+DL+ A+L +P +L +LL N+DE+ +
Sbjct: 125 RPELEEIQSVPDAFVPIIKMEFDGISIDLICARLDIPRVPLNLTLDDKNLLKNIDEKDLR 184
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
+LNG RVTD IL LVP F+ LR ++ WA+RR +Y N GF GG+ WA+LVAR+CQL
Sbjct: 185 ALNGTRVTDEILLLVPQPTVFKHALRAIKIWAQRRAVYGNVFGFPGGVAWAMLVARICQL 244
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
YPNA+ V++S+FF I W WP PV+L PI+ + VW+PR D+ H MP+ITP+
Sbjct: 245 YPNAVSAVIISKFFVILGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDKYHKMPVITPA 304
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
YP +++N++ +T +++ +EFQR + EI +G + W LF + FF +K YL +
Sbjct: 305 YPSMCATHNITESTKKVILQEFQRGSGIVTEIFSGAKKWSDLFTKHDFFRRYKFYLTVIA 364
Query: 360 AAKNAGDF-RQWKGWVESRLRQLIHMIERD 388
A K + + +++ G VES+LR L+ +E +
Sbjct: 365 ATKGSSEEQKKFAGMVESKLRLLVQKLENN 394
>gi|317140350|ref|XP_001818141.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
gi|391870730|gb|EIT79906.1| poly(A) polymerase [Aspergillus oryzae 3.042]
Length = 599
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 170/413 (41%), Positives = 245/413 (59%), Gaps = 7/413 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST PT ++ + +L L + F S E+ R L + + +++K V+ KG+
Sbjct: 15 ISTVLPTPDELAANDDLISELKLQNNFESPAETEHRKNTLQLIQRVTVEFVKVVSRKKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP-- 121
S ++ A K+FT+GSYRLGV GP +DID L VGP + DDFF +L+
Sbjct: 75 S-PAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLIVGPKHVV-IDDFFSDFPPVLERMAPQ 132
Query: 122 -LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
VE +TPVPDA VP+IK +F+G+S+DL+YA+L +P +LD + L LDE+ V S
Sbjct: 133 GAVEKMTPVPDAFVPIIKLEFSGISIDLIYARLIVPSVPLNLDLKNNDYLRGLDEKEVRS 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQLY
Sbjct: 193 LNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +V+V +FF+I W WP PV+L PI+ + VW+P+ DR HLMPIITP+Y
Sbjct: 253 PQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHI 359
P +++NVS +T ++ E QR ++ ++I + TW LF + FF +K YL I
Sbjct: 313 PSMCATHNVSMSTKTVILRELQRGGDIVDKIFLKQNTWNDLFARHSFFTRDYKYYLSITA 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQ 412
+++ W G VES++R L+ ++R + +P F + SS +
Sbjct: 373 SSRTKEAEAVWSGLVESKIRHLVGALDRK-STIAVAHPFPKGFERVHIVSSEE 424
>gi|238484201|ref|XP_002373339.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
gi|83765996|dbj|BAE56139.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701389|gb|EED57727.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
Length = 609
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 170/413 (41%), Positives = 245/413 (59%), Gaps = 7/413 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST PT ++ + +L L + F S E+ R L + + +++K V+ KG+
Sbjct: 15 ISTVLPTPDELAANDDLISELKLQNNFESPAETEHRKNTLQLIQRVTVEFVKVVSRKKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP-- 121
S ++ A K+FT+GSYRLGV GP +DID L VGP + DDFF +L+
Sbjct: 75 S-PAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLIVGPKHVV-IDDFFSDFPPVLERMAPQ 132
Query: 122 -LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
VE +TPVPDA VP+IK +F+G+S+DL+YA+L +P +LD + L LDE+ V S
Sbjct: 133 GAVEKMTPVPDAFVPIIKLEFSGISIDLIYARLIVPSVPLNLDLKNNDYLRGLDEKEVRS 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQLY
Sbjct: 193 LNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +V+V +FF+I W WP PV+L PI+ + VW+P+ DR HLMPIITP+Y
Sbjct: 253 PQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHI 359
P +++NVS +T ++ E QR ++ ++I + TW LF + FF +K YL I
Sbjct: 313 PSMCATHNVSMSTKTVILRELQRGGDIVDKIFLKQNTWNDLFARHSFFTRDYKYYLSITA 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQ 412
+++ W G VES++R L+ ++R + +P F + SS +
Sbjct: 373 SSRTKEAEAVWSGLVESKIRHLVGALDRK-STIAVAHPFPKGFERVHIVSSEE 424
>gi|396488901|ref|XP_003842971.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
gi|312219549|emb|CBX99492.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
Length = 577
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 184/517 (35%), Positives = 282/517 (54%), Gaps = 46/517 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ P + L + L + +F + E + R +V+ L +V+++++RV KG+
Sbjct: 15 ISTAGPGPEEAKLNDSLVETLTRKNVFETPEGNKKRDDVIRHLQTVVEEFVRRVCKQKGV 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
+ I A K+FTFGSY LGV GP++DID+L V P + D F F +FR + ++
Sbjct: 75 K-QAAIDVAGGKVFTFGSYALGVHGPTSDIDSLVVVPKQVSIDDFFRNFPSIFREMSKSE 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+ +L PV DA VP+IK ++ GVS+DL++A L + S +P D+++++ L L EQ + S
Sbjct: 134 DITELNPVEDAFVPIIKMEYRGVSLDLIFASLPKLSSVPRDMETIEKKNLDGLAEQAMRS 193
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
+NG RVT +L+ VP+ +FR LR ++ W+ RGIY G+ GG+ WA++VAR+CQLY
Sbjct: 194 VNGTRVTKELLAAVPHPGSFRHALRAIKLWSNERGIYGAVFGYPGGVAWAIMVARICQLY 253
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +VS+FF + W WP PV+L I+ AM VW+P+ DR HLMPIITP++
Sbjct: 254 PFANGATIVSKFFSLMQKWSWPRPVLLKHIEEGAMGLRVWNPQIYHGDRSHLMPIITPAF 313
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQIHI 359
P S++ V +TLRIMQEEFQRA ++ + I AG +TW LFE + FF K YL I
Sbjct: 314 PSMCSTHTVMPSTLRIMQEEFQRADQIMQHIFAGTKTWDALFERHSFFTKDHKYYLTIVA 373
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF-------SENSVKSSSQ 412
A++ ++ G V+S++R ++ I+ G+ R YP F +E+ V SQ
Sbjct: 374 ASRTQEAHERFNGLVQSKVRHIVKGIDDGQTGIDTARPYPKCFERVHRCTNEDQVFEVSQ 433
Query: 413 -----------------------------CHYFMGLGRKQGVSPQDGEKFDMRLTVEEFK 443
+++GL V+ + G D+ V +F+
Sbjct: 434 GSLKYMIPASEVPAEGASLANGDAQIMYTASWYIGL----TVTTEGGRALDISYPVSQFR 489
Query: 444 SHVVWMYSSWKQGMQIHVSHLRCQDIPDFVF-PGGVR 479
S + + M + V H R +PD +F PG R
Sbjct: 490 SFITDAEVFDDKTMSVKVIHTRNTALPDDLFLPGETR 526
>gi|207343429|gb|EDZ70889.1| YKR002Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271932|gb|EEU06953.1| Pap1p [Saccharomyces cerevisiae JAY291]
Length = 568
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 160/383 (41%), Positives = 245/383 (63%), Gaps = 7/383 (1%)
Query: 5 STSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGIS 64
+T+A L+ +EL+K E F +E+E+ RV+VL L + + ++ V+ K +S
Sbjct: 18 ATAAENKLNDSLIQELKK----EGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNMS 73
Query: 65 DEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVE 124
D ++A K+FT+GSYRLGV GP +DID L V P + TR +DFF +L+E ++
Sbjct: 74 D-GMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDSLLRERKELD 131
Query: 125 DLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGC 184
++ PVPDA VP+IK KF+G+S+DL+ A+L +P L +LL NLDE+ + +LNG
Sbjct: 132 EIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGT 191
Query: 185 RVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNAL 244
RVTD IL LVP FR LR ++ WA+RR +Y+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 192 RVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNAC 251
Query: 245 PNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTN 304
V+++RFF I + W WP PV+L PI+ + VW+P+ +DR H MP+ITP+YP
Sbjct: 252 SAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMC 311
Query: 305 SSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNA 364
+++N++ +T +++ +EF R ++ +I + K++W LFE FF +K YL+I + +
Sbjct: 312 ATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGS 371
Query: 365 GD-FRQWKGWVESRLRQLIHMIE 386
+ +W G VES++R L+ +E
Sbjct: 372 DEQHLKWSGLVESKVRLLVMKLE 394
>gi|323308211|gb|EGA61460.1| Pap1p [Saccharomyces cerevisiae FostersO]
Length = 568
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 160/383 (41%), Positives = 245/383 (63%), Gaps = 7/383 (1%)
Query: 5 STSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGIS 64
+T+A L+ +EL+K E F +E+E+ RV+VL L + + ++ V+ K +S
Sbjct: 18 ATAAENKLNDSLIQELKK----EGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNMS 73
Query: 65 DEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVE 124
D ++A K+FT+GSYRLGV GP +DID L V P + TR +DFF +L+E ++
Sbjct: 74 D-GMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDSLLRERKELD 131
Query: 125 DLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGC 184
++ PVPDA VP+IK KF+G+S+DL+ A+L +P L +LL NLDE+ + +LNG
Sbjct: 132 EIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGT 191
Query: 185 RVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNAL 244
RVTD IL LVP FR LR ++ WA+RR +Y+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 192 RVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNAC 251
Query: 245 PNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTN 304
V+++RFF I + W WP PV+L PI+ + VW+P+ +DR H MP+ITP+YP
Sbjct: 252 SAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMC 311
Query: 305 SSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNA 364
+++N++ +T +++ +EF R ++ +I + K++W LFE FF +K YL+I + +
Sbjct: 312 ATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGS 371
Query: 365 GD-FRQWKGWVESRLRQLIHMIE 386
+ +W G VES++R L+ +E
Sbjct: 372 DEQHLKWSGLVESKVRLLVMKLE 394
>gi|398364849|ref|NP_012927.3| Pap1p [Saccharomyces cerevisiae S288c]
gi|266739|sp|P29468.1|PAP_YEAST RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|3527|emb|CAA46250.1| polyA polymerase 1 [Saccharomyces cerevisiae]
gi|4099|emb|CAA42852.1| poly(A)polymerase [Saccharomyces cerevisiae]
gi|486407|emb|CAA82072.1| PAP1 [Saccharomyces cerevisiae]
gi|151941547|gb|EDN59910.1| poly(A) polymerase [Saccharomyces cerevisiae YJM789]
gi|190409824|gb|EDV13089.1| poly(A) polymerase [Saccharomyces cerevisiae RM11-1a]
gi|259147834|emb|CAY81084.1| Pap1p [Saccharomyces cerevisiae EC1118]
gi|285813261|tpg|DAA09158.1| TPA: Pap1p [Saccharomyces cerevisiae S288c]
gi|323304127|gb|EGA57905.1| Pap1p [Saccharomyces cerevisiae FostersB]
gi|349579565|dbj|GAA24727.1| K7_Pap1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298143|gb|EIW09241.1| Pap1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|228305|prf||1802393A poly(A) polymerase
Length = 568
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 160/383 (41%), Positives = 245/383 (63%), Gaps = 7/383 (1%)
Query: 5 STSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGIS 64
+T+A L+ +EL+K E F +E+E+ RV+VL L + + ++ V+ K +S
Sbjct: 18 ATAAENKLNDSLIQELKK----EGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNMS 73
Query: 65 DEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVE 124
D ++A K+FT+GSYRLGV GP +DID L V P + TR +DFF +L+E ++
Sbjct: 74 D-GMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDSLLRERKELD 131
Query: 125 DLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGC 184
++ PVPDA VP+IK KF+G+S+DL+ A+L +P L +LL NLDE+ + +LNG
Sbjct: 132 EIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGT 191
Query: 185 RVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNAL 244
RVTD IL LVP FR LR ++ WA+RR +Y+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 192 RVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNAC 251
Query: 245 PNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTN 304
V+++RFF I + W WP PV+L PI+ + VW+P+ +DR H MP+ITP+YP
Sbjct: 252 SAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMC 311
Query: 305 SSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNA 364
+++N++ +T +++ +EF R ++ +I + K++W LFE FF +K YL+I + +
Sbjct: 312 ATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGS 371
Query: 365 GD-FRQWKGWVESRLRQLIHMIE 386
+ +W G VES++R L+ +E
Sbjct: 372 DEQHLKWSGLVESKVRLLVMKLE 394
>gi|315043474|ref|XP_003171113.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
gi|311344902|gb|EFR04105.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
Length = 583
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 198/573 (34%), Positives = 305/573 (53%), Gaps = 63/573 (10%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S++ PT ++ L L + F + E+ R + L L + ++IK V+ +KG+
Sbjct: 15 LSSALPTPAELTENDALIAELKLQNNFETPSETEKRKQTLHLLQRVTIEFIKVVSKEKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE---T 120
S + I + K+FT+GSYRLGV GP +DID L V P + R +DFF +L++
Sbjct: 75 S-QAAIDASGGKIFTYGSYRLGVYGPGSDIDTLVVAPKHVMR-EDFFAHFPTVLEKFAPK 132
Query: 121 PLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+E +TPVPDA VP+IK + +G+S+DL++A+L S +P +LD LL LDE+ +
Sbjct: 133 DAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRC 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
+NG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQLY
Sbjct: 193 VNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +V+V +FF+I W WP PV+L I+ + VW+P+ DR HLMPIITP+Y
Sbjct: 253 PQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS-FKNYLQIHI 359
P +++NVS +T ++ E +R ++ ++I G+R W LF + FF + +K YL I+
Sbjct: 313 PSMCATHNVSMSTKSVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYLSINS 372
Query: 360 AAKNAGDFRQWKGWVESRLRQL----IHMIERD--MGGVLQCRL-YPGDFSENSV--KSS 410
+ W G VES+LR L +H+ + D + V + Y D ++ + +++
Sbjct: 373 TSTTKEAQAIWSGLVESKLRHLGFERVHICKTDAEIDAVKAGSMKYQADDTKTATTDETN 432
Query: 411 SQCHYFMGLGRKQGVSPQDGEK------------------------------FDMRLTVE 440
H + V+ + EK D+
Sbjct: 433 DPTHVAAAENANENVAIAEAEKPAEENKYTVYTTTYYIGLELKPLAPGASRSLDISSDTH 492
Query: 441 EFKSHVVWMYSSWKQ---GMQ-IHVSHLRCQDIPDFVF-PGGVRP--PKSLNEKK----- 488
FK+ +SW Q G+ +++SH+R D+PD VF PG VRP PK KK
Sbjct: 493 MFKNTC----TSWAQYQPGVNDLNISHVRNYDLPDDVFQPGEVRPTRPKKKVVKKAEQSV 548
Query: 489 --RKRIEVIESTKLKKSESSTAGHSSGQKSSQT 519
++ I+ ++ +L +S S +G + T
Sbjct: 549 SQKRTIDAVDGQELPESASKRHVSQNGMVTQAT 581
>gi|212531585|ref|XP_002145949.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
gi|210071313|gb|EEA25402.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
Length = 599
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 202/585 (34%), Positives = 297/585 (50%), Gaps = 77/585 (13%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT ++ + +L L + F E+ R + L + +V +++K V KG+
Sbjct: 15 ISMNLPTPEELAANDDLIAELKAQNNFELPSETERRQQTLQLIQRVVIEFVKTVGRRKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP-- 121
S ++ A K+FT+GSYRLGV GP +DID L V P + DDFF +L+
Sbjct: 75 S-PAALEAAGGKIFTYGSYRLGVYGPGSDIDTLIVAPKHVM-IDDFFSDFPPILERMSPP 132
Query: 122 -LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+E +TPVPDA VP+IK +F+G+S+DL++A+L +P +LD + L LD++ V S
Sbjct: 133 GAIEKMTPVPDAFVPIIKLEFSGISIDLIFARLILPSVPLNLDLKNNDYLRGLDDKEVRS 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD+IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQLY
Sbjct: 193 LNGTRVTDQILELVPQQKTFRIALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +V+V +FF+I W WP PV+L PI+ + VW+P+ DR HLMPIITP+Y
Sbjct: 253 PQATGSVIVGKFFRIMTKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHI 359
P +++N+S +T ++ E QR ++ ++I A + TW LF + FF +K YLQI
Sbjct: 313 PSMCATHNISLSTKAVILRELQRGGDMVDKIFAKQLTWNDLFTRHTFFSKDYKYYLQITA 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERDM---------GGVLQCRLYPGDFSENSVKSS 410
++K W G VES+LR L+ ++R G + + D VK+
Sbjct: 373 SSKTKEAESVWSGLVESKLRHLVGALDRKNIIAIAHPFPKGFERIHVVKDDAEAEQVKNG 432
Query: 411 SQCHYFMGLGRK------------------QGVSPQDGE--------------------- 431
S + G + +GV D E
Sbjct: 433 STKYQAQGTKTETTDETNDPVHTAAAENGAEGVQVPDPETNGAVDSRIIYTTTYYIGLEL 492
Query: 432 ---------KFDMRLTVEEFKSHVVWMYSSWKQGMQ-----IHVSHLRCQDIPDFVF-PG 476
D+ + FKS +SW QG Q + V+H+R D+PD VF PG
Sbjct: 493 KPLEPGASRSLDISVDANIFKSTC----TSW-QGFQEGINDLSVTHVRSFDLPDDVFEPG 547
Query: 477 GVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTES 521
RP + KK+ + + K+S + G + Q S
Sbjct: 548 EARPTRP---KKKVAKPITTAAPQKRSIDAVDGTMHPEAKRQVSS 589
>gi|10120664|pdb|1FA0|A Chain A, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|10120665|pdb|1FA0|B Chain B, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|188595983|pdb|3C66|A Chain A, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
gi|188595984|pdb|3C66|B Chain B, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
Length = 537
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 160/383 (41%), Positives = 245/383 (63%), Gaps = 7/383 (1%)
Query: 5 STSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGIS 64
+T+A L+ +EL+K E F +E+E+ RV+VL L + + ++ V+ K +S
Sbjct: 18 ATAAENKLNDSLIQELKK----EGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNMS 73
Query: 65 DEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVE 124
D ++A K+FT+GSYRLGV GP +DID L V P + TR +DFF +L+E ++
Sbjct: 74 D-GMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDSLLRERKELD 131
Query: 125 DLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGC 184
++ PVPDA VP+IK KF+G+S+DL+ A+L +P L +LL NLDE+ + +LNG
Sbjct: 132 EIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGT 191
Query: 185 RVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNAL 244
RVTD IL LVP FR LR ++ WA+RR +Y+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 192 RVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNAC 251
Query: 245 PNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTN 304
V+++RFF I + W WP PV+L PI+ + VW+P+ +DR H MP+ITP+YP
Sbjct: 252 SAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMC 311
Query: 305 SSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNA 364
+++N++ +T +++ +EF R ++ +I + K++W LFE FF +K YL+I + +
Sbjct: 312 ATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGS 371
Query: 365 GD-FRQWKGWVESRLRQLIHMIE 386
+ +W G VES++R L+ +E
Sbjct: 372 DEQHLKWSGLVESKVRLLVMKLE 394
>gi|126030614|pdb|2HHP|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Closed
Conformation
Length = 530
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 160/383 (41%), Positives = 245/383 (63%), Gaps = 7/383 (1%)
Query: 5 STSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGIS 64
+T+A L+ +EL+K E F +E+E+ RV+VL L + + ++ V+ K +S
Sbjct: 18 ATAAENKLNDSLIQELKK----EGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNMS 73
Query: 65 DEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVE 124
D ++A K+FT+GSYRLGV GP +DID L V P + TR +DFF +L+E ++
Sbjct: 74 D-GMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDSLLRERKELD 131
Query: 125 DLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGC 184
++ PVPDA VP+IK KF+G+S+DL+ A+L +P L +LL NLDE+ + +LNG
Sbjct: 132 EIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGT 191
Query: 185 RVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNAL 244
RVTD IL LVP FR LR ++ WA+RR +Y+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 192 RVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNAC 251
Query: 245 PNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTN 304
V+++RFF I + W WP PV+L PI+ + VW+P+ +DR H MP+ITP+YP
Sbjct: 252 SAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMC 311
Query: 305 SSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNA 364
+++N++ +T +++ +EF R ++ +I + K++W LFE FF +K YL+I + +
Sbjct: 312 ATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGS 371
Query: 365 GD-FRQWKGWVESRLRQLIHMIE 386
+ +W G VES++R L+ +E
Sbjct: 372 DEQHLKWSGLVESKVRLLVMKLE 394
>gi|358370159|dbj|GAA86771.1| poly(A) polymerase Pap [Aspergillus kawachii IFO 4308]
Length = 598
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 164/388 (42%), Positives = 239/388 (61%), Gaps = 6/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST PT ++ + +L L + F S E+ R +VL + + +++K V+ KG+
Sbjct: 15 ISTVLPTPDELAANDDLITELKVQNNFESPAETERRKQVLQLIQRVTVEFVKTVSRKKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL- 122
S + ++ A K+FT+GSYRLGV GP +DID L VGP + DDFF +L++
Sbjct: 75 S-QAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVI-IDDFFSDFPPILEKMAAP 132
Query: 123 --VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+E +TPVPDA VP+IK + +G+S+DL++A+L IP +LD + L LDE+ V S
Sbjct: 133 GAIEKMTPVPDAYVPIIKLELSGISIDLIFARLIIPSIPMNLDLKNNDYLRGLDEREVRS 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQLY
Sbjct: 193 LNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +V+V +FF+I W WP PV+L PI+ + VW+P+ DR HLMPIITP+Y
Sbjct: 253 PQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQIHI 359
P +++NVS +T ++ E QR ++ ++I + W LF + FF +K YL I
Sbjct: 313 PSMCATHNVSMSTKAVILRELQRGGDIVDKIFLKQLRWEDLFARHTFFTKDYKYYLSITA 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
+++ W G VES++R L+ ++R
Sbjct: 373 SSRTKEAESVWSGLVESKIRHLVGALDR 400
>gi|365764657|gb|EHN06179.1| Pap1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 488
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/383 (41%), Positives = 244/383 (63%), Gaps = 7/383 (1%)
Query: 5 STSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGIS 64
+T+A L+ +EL+K E F +E+E+ RV+VL L + + ++ V+ K +S
Sbjct: 18 ATAAENKLNDSLIQELKK----EGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNMS 73
Query: 65 DEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVE 124
D ++A K+FT+GSYRLGV GP +DID L V P + TR +DFF +L+E ++
Sbjct: 74 D-GMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDSLLRERKELD 131
Query: 125 DLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGC 184
++ PVPDA VP+IK KF+G+S+DL+ A+L +P L +LL NLDE+ + +LNG
Sbjct: 132 EIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGT 191
Query: 185 RVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNAL 244
RVTD IL LVP FR LR ++ WA+RR +Y+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 192 RVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNAC 251
Query: 245 PNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTN 304
V+++RFF I + W WP PV+L PI+ + VW+P+ +DR H MP+ITP+YP
Sbjct: 252 SAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMC 311
Query: 305 SSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNA 364
+++N++ T +++ +EF R ++ +I + K++W LFE FF +K YL+I + +
Sbjct: 312 ATHNITECTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGS 371
Query: 365 GD-FRQWKGWVESRLRQLIHMIE 386
+ +W G VES++R L+ +E
Sbjct: 372 DEQHLKWSGLVESKVRLLVMKLE 394
>gi|126031338|pdb|2O1P|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
gi|126031339|pdb|2O1P|B Chain B, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
Length = 546
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/383 (41%), Positives = 245/383 (63%), Gaps = 7/383 (1%)
Query: 5 STSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGIS 64
+T+A L+ +EL+K E F +E+E+ RV+VL L + + ++ V+ K +S
Sbjct: 18 ATAAENKLNDSLIQELKK----EGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNMS 73
Query: 65 DEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVE 124
D ++A K+FT+GSYRLGV GP +DID L V P + TR +DFF +L+E ++
Sbjct: 74 D-GMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDSLLRERKELD 131
Query: 125 DLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGC 184
++ PVPDA VP+IK KF+G+S+DL+ A+L +P L +LL NLDE+ + +LNG
Sbjct: 132 EIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGT 191
Query: 185 RVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNAL 244
RVTD IL LVP FR LR ++ WA+RR +Y+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 192 RVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNAC 251
Query: 245 PNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTN 304
V+++RFF I + W WP PV+L PI+ + VW+P+ +DR H MP+ITP+YP
Sbjct: 252 SAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMC 311
Query: 305 SSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNA 364
+++N++ +T +++ +EF R ++ +I + K++W LFE FF +K YL+I + +
Sbjct: 312 ATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGS 371
Query: 365 GD-FRQWKGWVESRLRQLIHMIE 386
+ +W G VES++R L+ +E
Sbjct: 372 DEQHLKWSGLVESKVRLLVMKLE 394
>gi|226479000|emb|CAX72995.1| poly (A) polymerase beta [Schistosoma japonicum]
Length = 704
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 208/584 (35%), Positives = 308/584 (52%), Gaps = 56/584 (9%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S PT D+ T+ELE L +F ++EE R E L RL I WI++ +++ +
Sbjct: 18 LSFKKPTEQDLKDTQELEASLAQLNIFETQEEISQRREALVRLQEISNGWIRQKALEQNL 77
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
K+FTFGSYRLGV DID+L V P + TR ++FF +L E P V
Sbjct: 78 P-THVANSTTGKIFTFGSYRLGVNFRGADIDSLLVVPRFITR-EEFFSDFQTVLAENPNV 135
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDS--LLHNLDEQTVLSL 181
EDL V DA VPV+K KF GV +DLL+AQ+ IPE+ +++ L+ N+DE+ V S+
Sbjct: 136 EDLHAVVDAFVPVVKMKFMGVEIDLLFAQIDQMSIPENFSLCENTEVLMRNMDERDVRSI 195
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RVT+ IL+LV N +F+ L+ +R WAKRR +YSNA+GFLGG++WA+LV+R+CQLYP
Sbjct: 196 NGVRVTEDILNLVYNKNSFKVALKVIRIWAKRRNVYSNALGFLGGVSWAILVSRICQLYP 255
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA---MPHHVWDPRSNQRDRKHLMPIITP 298
A P+++V FF IF+ W WP PV L +Y A +P VWDPR N D+ HLMPI+TP
Sbjct: 256 YATPSMIVYLFFTIFSQWPWPKPVRLRESEYIASLCLP--VWDPRLNPSDQYHLMPILTP 313
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIH 358
SYP NS+YNV + I++ E ++ + KR+W LFE FF +++Y+ +
Sbjct: 314 SYPSQNSTYNVQRSNRIIIERELKQGLNVVRASMMHKRSWSNLFEAAFFF-QYRHYVVVI 372
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERD---MGGVLQCRLY---PGDFSENSVKSSSQ 412
+ F + G VESRLR L+ E + + CR Y P D N V+
Sbjct: 373 VVGNVKHTFIELCGLVESRLRVLVSNFEVNRYVKMAHINCRAYGKGPNDDDANFVR---- 428
Query: 413 CHYFMGLGRKQGV---------SPQDGEK----FDMRLTVEEFKSHVVWMYSSWKQGMQI 459
+F+G+ + S GEK D+ + F+ + SS + + +
Sbjct: 429 -KWFIGMEFDRNTNSLTSTVHNSNTAGEKPTLNVDLSENISSFEKSIERGLSS--EDLSV 485
Query: 460 HVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQT 519
V +++ + F+ + ++E KR +++ A S+ S++
Sbjct: 486 TVKYVKKSQLAQFI------SAEDMDEIKR--------------QAAAAALSNVNNSTEN 525
Query: 520 ESGVALDGSHGLKSGPSVEPSTSSVSSSTSASSRPQRPAVSIET 563
GV S+ S S S+ +S+S ASS R S+ T
Sbjct: 526 LKGVRQLPSNNALSTMSSPASSIELSTSEEASSPSNRLQNSVST 569
>gi|325090895|gb|EGC44205.1| poly(A) polymerase Pap [Ajellomyces capsulatus H88]
Length = 594
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 194/567 (34%), Positives = 297/567 (52%), Gaps = 84/567 (14%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + PT ++ + +L L + F + E+ R + L + + +++K V+ KG+
Sbjct: 15 VSNALPTPAEIAANDDLTTELKRQNNFEAPAETERRKQTLQLIQRVTVEFVKVVSRRKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
S + I A K+FT+GSYRLGV GP +DID L VGP + + D F F + +
Sbjct: 75 S-QAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFEDFFSDFPPILENMAPKG 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
+E LT VPDA VP+IK + +G+S+DL+YA+L +P +LD LL LDE+ + +
Sbjct: 134 AIEKLTSVPDAYVPIIKIELSGISIDLIYARLLVHSVPLNLDLRNKDLLRGLDEKEIRCV 193
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQLYP
Sbjct: 194 NGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYP 253
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
A + +V +FF+I WKWP PV+L PI+ + VW+P+ D+ HLMPIITP+YP
Sbjct: 254 QATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYP 313
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHIA 360
+++NVS +T ++ E +R ++ ++I G+ +W LF + FF +K YL I A
Sbjct: 314 SMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFFSQDYKYYLNITSA 373
Query: 361 AKNAGDFRQWKGWVESRLRQLIHMIERD----------------------------MGGV 392
+++ W G VES+LR L+ ++R MGG
Sbjct: 374 SRSKDAQSVWSGLVESKLRHLVGALDRKSSIEIAHPFPKGFERIHICKDEKEIVEVMGGS 433
Query: 393 LQCRLYPGDFSENSVKSSSQCH-------------------------------YFMGLGR 421
++ + G +E + +S+ H Y++GL
Sbjct: 434 MKYQAK-GTKTETTDESNDPQHTAASQNGGEAIKMPETDHPNGDNGCTLYTTTYYIGLEL 492
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQ---GMQ-IHVSHLRCQDIPDFVF-PG 476
K V D+ FKS +SW Q G+ ++++H+R D+P+ VF PG
Sbjct: 493 KPLVP-------DISADTHIFKSTC----TSWAQYQPGINDLNITHVRNYDLPEDVFQPG 541
Query: 477 GVRPPKSLNEKKRKRIEVIESTKLKKS 503
VRP + K+K ++ E T K++
Sbjct: 542 EVRPSRP----KKKVVKKSEPTAQKRN 564
>gi|401840600|gb|EJT43353.1| PAP1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 569
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/383 (41%), Positives = 245/383 (63%), Gaps = 7/383 (1%)
Query: 5 STSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGIS 64
+T+A L+ +EL+K E F +E+E+ RV+VL L + + ++ V+ K +S
Sbjct: 18 ATAAENKLNDSLIQELKK----EGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNMS 73
Query: 65 DEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVE 124
D ++A K+FT+GSYRLGV GP +DID L V P + R +DFF +L+E ++
Sbjct: 74 D-GMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVIR-EDFFTVFDALLRERKELD 131
Query: 125 DLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGC 184
++ PVPDA VP+IK KF+G+S+DL+ A+L +P L +LL NLDE+ + +LNG
Sbjct: 132 EIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGT 191
Query: 185 RVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNAL 244
RVTD IL LVP FR LR ++ WA+RR +Y+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 192 RVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNAC 251
Query: 245 PNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTN 304
V+++RFF I + W WP PV+L PI+ + VW+P+ +DR H MP+ITP+YP
Sbjct: 252 SAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMC 311
Query: 305 SSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNA 364
+++N++ +T +++ +EF+R ++ +I + K++W LFE FF +K YL+I + +
Sbjct: 312 ATHNITESTKKVILKEFERGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGS 371
Query: 365 GD-FRQWKGWVESRLRQLIHMIE 386
+ +W G VES++R L+ +E
Sbjct: 372 DEQHLKWSGLVESKVRLLVMKLE 394
>gi|341895379|gb|EGT51314.1| hypothetical protein CAEBREN_01393 [Caenorhabditis brenneri]
Length = 1333
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 178/435 (40%), Positives = 260/435 (59%), Gaps = 22/435 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT D+ T L + L F ++EE+ R++VL L+ VK WI+ GI
Sbjct: 827 ISLAQPTPKDLSLTCSLLQELKSVGSFEAKEETTKRIQVLQFLNATVKKWIQ------GI 880
Query: 64 SDEE----QIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE 119
S + EA ++ +FGSYRLGV DID++ + P +R D FF L +L
Sbjct: 881 SSARLPNGKFFEAGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVSRTD-FFTSLKDILLR 939
Query: 120 TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVL 179
P V++L V A VP++ F+F GV VDLL+A+L +VIPE +D D+LL N+D+++V
Sbjct: 940 NPNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQESVR 999
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
SLNG RV +++L LVPN +F TLR ++ WAK G+YSNAMGF GGI WALLVAR CQL
Sbjct: 1000 SLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVARTCQL 1059
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLC-PIQYQ----AMPHHVWDPRSNQRDRKHLMP 294
YPNA P+ LV + F +F+ W +P+P++LC P + + A+ + W N DR HLMP
Sbjct: 1060 YPNATPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLALDNLCWG--RNHADRFHLMP 1117
Query: 295 IITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNY 354
IITP++P NS++NVS +T+ ++++E A +C ++ GK W LFE +F+ +K++
Sbjct: 1118 IITPAFPEQNSTHNVSRSTMEVIKKEMADALIICNDVFEGKCDWKFLFEEVNFYSQYKHF 1177
Query: 355 LQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCH 414
+ + + AK + G++ESRLR L+ ER+ G L L P + S SQ
Sbjct: 1178 VVMKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKL-AHLNP---KKCQPTSKSQSL 1233
Query: 415 YFMGLGRKQGVSPQD 429
+F+GL + V D
Sbjct: 1234 WFIGLEFDEVVKNMD 1248
>gi|154282671|ref|XP_001542131.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
gi|150410311|gb|EDN05699.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
Length = 594
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 194/567 (34%), Positives = 297/567 (52%), Gaps = 84/567 (14%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + PT ++ + +L L + F + E+ R + L + + +++K V+ KG+
Sbjct: 15 VSNALPTPAEIAANDDLTTELKRQNNFEAPAETERRKQTLQLIQRVTVEFVKVVSRRKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
S + I A K+FT+GSYRLGV GP +DID L VGP + + D F F + +
Sbjct: 75 S-QAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFEDFFSDFPPILENMAPKG 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
+E LT VPDA VP+IK + +G+S+DL+YA+L +P +LD LL LDE+ + +
Sbjct: 134 AIEKLTSVPDAYVPIIKIELSGISIDLIYARLLVHSVPLNLDLRNKDLLRGLDEKEIRCV 193
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQLYP
Sbjct: 194 NGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYP 253
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
A + +V +FF+I WKWP PV+L PI+ + VW+P+ D+ HLMPIITP+YP
Sbjct: 254 QATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYP 313
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHIA 360
+++NVS +T ++ E +R ++ ++I G+ +W LF + FF +K YL I A
Sbjct: 314 SMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFFSQDYKYYLNITSA 373
Query: 361 AKNAGDFRQWKGWVESRLRQLIHMIERD----------------------------MGGV 392
+++ W G VES+LR L+ ++R MGG
Sbjct: 374 SRSKDAQSVWSGLVESKLRHLVGALDRKSSIEIAHPFPKGFERIHVCKDEKEIVEVMGGS 433
Query: 393 LQCRLYPGDFSENSVKSSSQCH-------------------------------YFMGLGR 421
++ + G +E + +S+ H Y++GL
Sbjct: 434 MKYQAK-GTKTETTDESNDPQHTAASQNGGEAIKMPETDHPNGDNGCTLYTTTYYIGLEL 492
Query: 422 KQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQ---GMQ-IHVSHLRCQDIPDFVF-PG 476
K V D+ FKS +SW Q G+ ++++H+R D+P+ VF PG
Sbjct: 493 KPLVP-------DISADTHIFKSTC----TSWAQYQPGINDLNITHVRNYDLPEDVFQPG 541
Query: 477 GVRPPKSLNEKKRKRIEVIESTKLKKS 503
VRP + K+K ++ E T K++
Sbjct: 542 EVRPSRP----KKKVVKKSEPTVQKRN 564
>gi|242773312|ref|XP_002478214.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
gi|218721833|gb|EED21251.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
Length = 599
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 165/388 (42%), Positives = 239/388 (61%), Gaps = 6/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT ++ + +L L + F E+ R + L + +V +++K V KG+
Sbjct: 15 ISMNLPTPEELAANDDLIAELKAQNNFELPAETERRQQTLQLIQKVVIEFVKTVGRRKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP-- 121
S ++ A K+FT+GSYRLGV GP +DID L V P + DDFF +L+
Sbjct: 75 S-PAVLEAAGGKIFTYGSYRLGVYGPGSDIDTLIVAPKHVL-IDDFFSDFPPILERMSPP 132
Query: 122 -LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+E +TPVPDA VP+IK +F+G+S+DL++A+L IP +LD + L LD++ V S
Sbjct: 133 GAIEKMTPVPDAFVPIIKLEFSGISLDLIFARLILPSIPLNLDLKNNDYLRGLDDKEVRS 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD+IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQLY
Sbjct: 193 LNGTRVTDQILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +V+V +FF+I W WP PV+L PI+ + VW+P+ DR HLMPIITP+Y
Sbjct: 253 PQATGSVIVGKFFRIMTKWAWPQPVLLKPIEDGPLQIKVWNPKIYHTDRFHLMPIITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHI 359
P +++N+S +T ++ E QR ++ ++I A + TW LF + FF +K YLQI
Sbjct: 313 PSMCATHNISLSTKAVILRELQRGGDIVDKIFAKQLTWNDLFTRHTFFSKDYKYYLQITA 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
++K W G VES+LR L+ ++R
Sbjct: 373 SSKTKEADSVWSGLVESKLRHLVGALDR 400
>gi|170040884|ref|XP_001848213.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167864495|gb|EDS27878.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 395
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 164/384 (42%), Positives = 234/384 (60%), Gaps = 11/384 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D T EL+K L +F E + R+E+L +L+ +VK W++ V++ K +
Sbjct: 5 ISLAEPKTEDHTKTVELQKSLEPYNVFEDESKLNHRMEILSKLNTLVKQWVRNVSISKNM 64
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ K++TFGSYRL V T+IDALCV P R D +FG F +L++ P
Sbjct: 65 P-EVLAEKLGGKIYTFGSYRLSVNHKGTNIDALCVAPRNIERQD-YFGSFFELLKKQP-- 120
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ V +A VPV+K KF+G+ +DLL+A+L IP++ D +D LL NLD + V SLNG
Sbjct: 121 -EYRAVEEALVPVVKMKFDGIKIDLLFARLALKEIPDNFDLREDMLLKNLDPKLVRSLNG 179
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CR TD IL VPNI NFR LR ++ WAK+ GIYSN++G+ GG++W +LVAR CQL PN
Sbjct: 180 CRATDEILRPVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVSWGMLVARTCQL-PNV 238
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ V +FF +F WKWP PV L + VWD R N +DR HLM IITP+YP
Sbjct: 239 VAATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMSIITPAYPQQ 298
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+++VSS+T ++M EF ++ +EI GK W LFE FF ++ ++ + + + N
Sbjct: 299 NSTFHVSSSTRKVMLNEFNSDMQITDEIMLGKAGWDKLFEAPSFFFKYRYFIVLLVTSNN 358
Query: 364 AGDFRQWKGWVESRLRQLIHMIER 387
D + ES++R LI +ER
Sbjct: 359 TDDHLE-----ESKIRYLIQNLER 377
>gi|154316305|ref|XP_001557474.1| hypothetical protein BC1G_03738 [Botryotinia fuckeliana B05.10]
Length = 544
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 188/532 (35%), Positives = 291/532 (54%), Gaps = 28/532 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+ST+ PT + +T L + + E LF S ++ R VL L I ++++KRV + +
Sbjct: 15 LSTALPTDAEKQATDALIEEMTKENLFESRADTEKRSAVLASLQSITEEFVKRVCRKQNL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
E + A ++FT+GS+RLGV GP +DID L V P +R + F F L +
Sbjct: 75 P-ENIVNNAGGRIFTYGSFRLGVYGPGSDIDTLVVVPKNVSREEYFELFPDLLVEMAPEG 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQ-FSVIPEDLDSLQDSLLHNLDEQTVLS 180
+EDLTPVP+A VP+IKF+++G+S+DL++A+++ + I L D+LL LDE + S
Sbjct: 134 AIEDLTPVPEAFVPIIKFEYSGISIDLIFARIEVLTQISRSLSLNDDNLLTGLDEAGLRS 193
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD IL+LVP FR+ LR ++ WA+RR IY+N MGF GG+ WA+LVARVCQLY
Sbjct: 194 LNGTRVTDDILNLVPEKAVFRTALRGVKLWAQRRAIYANIMGFPGGVAWAMLVARVCQLY 253
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A + ++ +FF+I + W+WP PV+L I+ + VW+PR + D HLMPIITPSY
Sbjct: 254 PQATASTVILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRVYKGDGYHLMPIITPSY 313
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQIHI 359
P +++N++ +T I+ E R + + I GK +W LF + FF ++K YL +
Sbjct: 314 PSMCATHNITKSTKEIICRELARGGNITDRIMTGKASWKDLFVKHTFFTKNYKYYLSVIS 373
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPG------DFSENSVKSSSQC 413
A+ W G VES++R L+ +E L G SE+ ++S +
Sbjct: 374 ASTTKEAQLIWAGLVESKVRLLVANVENHESIALAHPFNKGFERVHKCSSEDEIESVKEG 433
Query: 414 HYFMGLGRKQGVSPQDGEKFDMRLTVE-----------EFKSHVVWMYSSWKQGMQIHVS 462
+ + V+ + V+ E K +V+ + + G+++
Sbjct: 434 NLQYQIKEIPTVTTDPSHDTTLGTAVKDQNGDAPKSEPEKKESLVYTTTHY-IGLELREG 492
Query: 463 ----HLRCQDIPDFVFP-GGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAG 509
L C D+PD VF G V+P +S +KKR + +E+ K+ + AG
Sbjct: 493 AKSLDLACCDLPDDVFTEGEVKPTRSQKKKKRSSADDVENASTKRRQVVAAG 544
>gi|164423119|ref|XP_959011.2| Poly(A) polymerase [Neurospora crassa OR74A]
gi|157069956|gb|EAA29775.2| Poly(A) polymerase [Neurospora crassa OR74A]
Length = 632
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 168/391 (42%), Positives = 244/391 (62%), Gaps = 8/391 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT + T+ L K L + F S+ E+ R VL L I +++KR +K
Sbjct: 14 ISTTLPTDAEKRQTEALLKELRAQGTFESQAETDKRWAVLADLQRITDEFVKRAAQEKEP 73
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYAT--RHDDFFGKLFRMLQETP 121
+ I++A ++FT+GS+RLGV GP +DID L V P Y T ++ D F L +
Sbjct: 74 HNAILIRDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTVKQYFDIFPNLLVEMAPPG 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQ-FSVIPEDLD-SLQ-DSLLHNLDEQTV 178
+ DLTPVP+A VP+IKF+++G+S+DL++ +Q +P+D D +L ++LL L E V
Sbjct: 134 AITDLTPVPEAFVPIIKFEYSGISIDLIFCSIQSLRQLPDDKDWNLNSNNLLRGLSENEV 193
Query: 179 LSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQ 238
SLNG RVTD IL+LVP + F+ LR ++ WA+RR IY+N MG+ GG+ WA+LVARVCQ
Sbjct: 194 RSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGVAWAMLVARVCQ 253
Query: 239 LYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQY-QAMPH-HVWDPRSNQRDRKHLMPII 296
LYP A V+V +FF I +W WP PV+L I+Y Q++ VW+P+ DR H MPII
Sbjct: 254 LYPKATSAVIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRNHKMPII 313
Query: 297 TPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYL 355
TPSYP +++NV +++ ++Q+E +R ++ EEI GKR W LFE + FF FK YL
Sbjct: 314 TPSYPSMCATHNVGRSSMAVIQQELERGVQISEEIMLGKRPWKDLFEKHTFFTNGFKFYL 373
Query: 356 QIHIAAKNAGDFRQWKGWVESRLRQLIHMIE 386
+ + + W G+VESR+R L+ +E
Sbjct: 374 TVISSGRTKEAQNTWSGFVESRVRVLVQKLE 404
>gi|425765475|gb|EKV04155.1| Poly(A) polymerase Pap [Penicillium digitatum Pd1]
gi|425778347|gb|EKV16478.1| Poly(A) polymerase Pap [Penicillium digitatum PHI26]
Length = 597
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 198/586 (33%), Positives = 294/586 (50%), Gaps = 73/586 (12%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST PT ++ + +L L + F E+ R +VL L + ++++ V+ KG+
Sbjct: 15 ISTVLPTKDELSANDDLIAELKAQNNFELPTETERRKQVLQLLQRVTVEFVQVVSRKKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP-- 121
S ++ + K+FT+GSYRLGV GP +DID L VGP + DDFF + +LQ
Sbjct: 75 S-PAAVEASGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVL-IDDFFAEFPPILQRMASE 132
Query: 122 -LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+E +TPVPDA VP+IK + G+S+DL++A+L IP +LD + L LDE+ V S
Sbjct: 133 GAIEKMTPVPDAFVPIIKLELCGISIDLIFARLVIPAIPMNLDLKNNDYLRGLDEREVRS 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQLY
Sbjct: 193 LNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +V+V +FF+I W WP PV+L I+ + VW+P+ DR HLMPIITP+Y
Sbjct: 253 PQATGSVIVGKFFRIMNKWNWPQPVLLKQIEDGPLQIKVWNPKIYHGDRFHLMPIITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHI 359
P +++N+S +T ++ E QR ++ ++I + +W LF + FF +K YL I
Sbjct: 313 PSMCATHNISMSTKAVILRELQRGGDIVDKIFMKQLSWQDLFARHTFFTHDYKYYLSITA 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERD---------MGGVLQCRLYPGDFSENSVKSS 410
++K W G VES+LR L+ ++R G + + + +VK+
Sbjct: 373 SSKTKEAESVWSGLVESKLRHLVGALDRKPIVAVAHPFPKGFERIHIIKNEQEMEAVKNG 432
Query: 411 SQCHYFMGL-------------------------------GRKQGVSPQDGE-------- 431
S H G G+ +G DG+
Sbjct: 433 STQHQAKGTKTAMTDETKDHAHQAAIQNTLENAEVPAPAEGKVEGTVDNDGQTVYTTTYY 492
Query: 432 --------------KFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVF-PG 476
D+ + FKS ++ M++ V+H+R D+PD VF PG
Sbjct: 493 IGLELKPLEPGQSRSLDISTDSQIFKSTCTSWPGYQEEVMELAVTHVRSFDLPDDVFQPG 552
Query: 477 GVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESG 522
R + K+K + E+ K+S G + G Q S
Sbjct: 553 ETRASRP----KKKVTKRSEAAGQKRSIGELDGSTEGAAKRQVTSA 594
>gi|336470057|gb|EGO58219.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2508]
gi|350290251|gb|EGZ71465.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2509]
Length = 632
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 168/391 (42%), Positives = 244/391 (62%), Gaps = 8/391 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT + T+ L K L + F S+ E+ R VL L I +++KR +K
Sbjct: 14 ISTALPTDAEKRQTEALLKELRAQGTFESQAETDKRWAVLADLQRITDEFVKRAAQEKEP 73
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYAT--RHDDFFGKLFRMLQETP 121
+ I++A ++FT+GS+RLGV GP +DID L V P Y T ++ D F L +
Sbjct: 74 HNAILIRDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTVKQYFDIFPNLLVEMAPPG 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQ-FSVIPEDLD-SLQ-DSLLHNLDEQTV 178
+ DLTPVP+A VP+IKF+++G+S+DL++ +Q +P+D D +L ++LL L E V
Sbjct: 134 AITDLTPVPEAFVPIIKFEYSGISIDLIFCSIQSLRQLPDDKDWNLNSNNLLRGLSENEV 193
Query: 179 LSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQ 238
SLNG RVTD IL+LVP + F+ LR ++ WA+RR IY+N MG+ GG+ WA+LVARVCQ
Sbjct: 194 RSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGVAWAMLVARVCQ 253
Query: 239 LYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQY-QAMPH-HVWDPRSNQRDRKHLMPII 296
LYP A V+V +FF I +W WP PV+L I+Y Q++ VW+P+ DR H MPII
Sbjct: 254 LYPKATSAVIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRNHKMPII 313
Query: 297 TPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYL 355
TPSYP +++NV +++ ++Q+E +R ++ EEI GKR W LFE + FF FK YL
Sbjct: 314 TPSYPSMCATHNVGRSSMAVIQQELERGVQISEEIMLGKRPWKDLFEKHTFFTNGFKFYL 373
Query: 356 QIHIAAKNAGDFRQWKGWVESRLRQLIHMIE 386
+ + + W G+VESR+R L+ +E
Sbjct: 374 TVISSGRTKEAQNTWSGFVESRVRVLVQKLE 404
>gi|158429647|pdb|2Q66|A Chain A, Structure Of Yeast Poly(A) Polymerase With Atp And
Oligo(A)
Length = 525
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 159/383 (41%), Positives = 244/383 (63%), Gaps = 7/383 (1%)
Query: 5 STSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGIS 64
+T+A L+ +EL+K E F +E+E+ RV+VL L + + ++ V+ K +S
Sbjct: 14 ATAAENKLNDSLIQELKK----EGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNMS 69
Query: 65 DEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVE 124
D ++A K+FT+GSYRLGV GP +DID L V P + TR +DFF +L+E ++
Sbjct: 70 D-GMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTR-EDFFTVFDSLLRERKELD 127
Query: 125 DLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGC 184
++ PVPDA VP+IK KF+G+S+ L+ A+L +P L +LL NLDE+ + +LNG
Sbjct: 128 EIAPVPDAFVPIIKIKFSGISIALICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGT 187
Query: 185 RVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNAL 244
RVTD IL LVP FR LR ++ WA+RR +Y+N GF GG+ WA+LVAR+CQLYPNA
Sbjct: 188 RVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNAC 247
Query: 245 PNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTN 304
V+++RFF I + W WP PV+L PI+ + VW+P+ +DR H MP+ITP+YP
Sbjct: 248 SAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMC 307
Query: 305 SSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNA 364
+++N++ +T +++ +EF R ++ +I + K++W LFE FF +K YL+I + +
Sbjct: 308 ATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGS 367
Query: 365 GD-FRQWKGWVESRLRQLIHMIE 386
+ +W G VES++R L+ +E
Sbjct: 368 DEQHLKWSGLVESKVRLLVMKLE 390
>gi|156342919|ref|XP_001620975.1| hypothetical protein NEMVEDRAFT_v1g176602 [Nematostella vectensis]
gi|156206500|gb|EDO28875.1| predicted protein [Nematostella vectensis]
Length = 485
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/388 (44%), Positives = 246/388 (63%), Gaps = 7/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ TK LE+ L+ +F SE+E R+ VL +L+ +VK+WI V++ K +
Sbjct: 22 ISHAGPKPRDLELTKRLEEALIPYGVFESEDELQQRMIVLAKLNELVKEWIVEVSIKKKM 81
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E + K+FTFGS+ LGV + D L V P + R DFF + +L+ P V
Sbjct: 82 P-ENVAKTVGGKIFTFGSFILGVH--TKGADTLLVAPHHIDR-ADFFSSFYDLLKNHPDV 137
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L V +A VPVIK F + VDLL+A+L IP++LD L ++LL NLD + V SLNG
Sbjct: 138 RELRAVENAFVPVIKLIFCDIEVDLLFARLASPEIPDNLDLLDENLLKNLDPKCVRSLNG 197
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL VPNI +FR TL ++ WAK+ G+YSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 198 CRVTDEILRQVPNIESFRLTLNAVKLWAKKHGVYSNVLGFLGGVSWAMLVARTCQLYPNA 257
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPI---QYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
+ L+ +FF +F+ W+WPNPV+L I + WDPR+N DR HLMPIITP+Y
Sbjct: 258 AASTLLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGFKNWDPRTNPGDRYHLMPIITPAY 317
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIA 360
P NS++NVS +T +IM +EF + E++ +GK W LF P +FF +++Y+ + +
Sbjct: 318 PQQNSTFNVSMSTRKIMCDEFFIGLKNTEDVISGKANWDRLFTPPNFFHKYRHYIVLSAS 377
Query: 361 AKNAGDFRQWKGWVESRLRQLIHMIERD 388
+ + +W G VES++R LI +E +
Sbjct: 378 SNTEEEHLEWIGLVESKVRLLISYLENN 405
>gi|341899942|gb|EGT55877.1| hypothetical protein CAEBREN_08096 [Caenorhabditis brenneri]
Length = 528
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 174/431 (40%), Positives = 260/431 (60%), Gaps = 14/431 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT D+ T L + L F ++EE+ R++VL L+ VK WI+ ++ +
Sbjct: 22 ISLAQPTPKDISLTCSLLQELKSFGSFEAKEETTKRIQVLQFLNATVKKWIQGISASR-- 79
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ EA ++ +FGSYRLGV DID++ + P +R D FF L +L P V
Sbjct: 80 LPNGKFFEAGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVSRAD-FFTSLKDILIRNPNV 138
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
++L V A VP++ F+F GV VDLL+A+L +VIPE +D D+LL N+D+++V SLNG
Sbjct: 139 KNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQESVRSLNG 198
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RV +++L LVPN +F TLR ++ WAK G+YSNAMGF GGI WA+LVAR CQLYPNA
Sbjct: 199 VRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWAILVARACQLYPNA 258
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLC-PIQYQ----AMPHHVWDPRSNQRDRKHLMPIITP 298
P+ LV + F +F+ W +P+P++LC P + + A+ + W N DR HLMPIITP
Sbjct: 259 SPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLALDNLCWG--RNHADRFHLMPIITP 316
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIH 358
++P NS++NVS +T+ ++++E A +C ++ GK W LFE +F+ +K+++ +
Sbjct: 317 AFPEQNSTHNVSRSTMEVIKKEMTDALTICNDVFEGKCDWKHLFEEVNFYSQYKHFVVMK 376
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMG 418
+ AK + G++ESRLR L+ ER+ G L L P + S SQ +F+G
Sbjct: 377 LDAKKEETENSYGGFLESRLRVLVGAFERNRGIKL-AHLNP---KKCQPTSKSQSLWFIG 432
Query: 419 LGRKQGVSPQD 429
L + V D
Sbjct: 433 LEFDEVVKNMD 443
>gi|340959697|gb|EGS20878.1| poly(A) polymerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 675
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 172/429 (40%), Positives = 249/429 (58%), Gaps = 16/429 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT + L K L + F S E R +VL L+ I ++KR +K
Sbjct: 13 ISTALPTENEKRLHDALHKELRAQGTFESPAERAKREKVLAELEKITNVFVKRAAQEKQP 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
+ I++A ++FT+GSYRLGV GP +DID L V P Y T F F ++ +
Sbjct: 73 KNSILIRDAIGRVFTYGSYRLGVYGPGSDIDTLVVAPKYVTVEQYFRIFPQVLVEMAPPG 132
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQ-FSVIPEDLD-SLQDS-LLHNLDEQTV 178
++DLTPVP+A VP+IKF+F+G+S+DL++ +Q +P D + SL D+ LL L E V
Sbjct: 133 AIKDLTPVPEAFVPIIKFEFDGISIDLIFCSIQTLMQLPADPNWSLADNNLLRGLSENEV 192
Query: 179 LSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQ 238
SLNG RVTD IL+LVP F+ LR ++ WA+R+ IY+N MGF GG+ WA+LVARVCQ
Sbjct: 193 RSLNGTRVTDEILNLVPEPATFKLALRAIKLWAQRKAIYANIMGFPGGVAWAMLVARVCQ 252
Query: 239 LYPNALPNVLVSRFFKIFAHWKWPNPVML------CPIQYQAMPHHVWDPRSNQRDRKHL 292
LYP A V+V++FF I W WP PV+L CP+ A VW+P+ DR H
Sbjct: 253 LYPKATSAVIVNKFFHIMVKWPWPLPVLLKDIEYGCPVTRVA----VWNPKLYASDRNHK 308
Query: 293 MPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSF 351
MPIITP+YP +++NV ++T+ ++Q+E ++ ++ +EI G+R W LF + FF F
Sbjct: 309 MPIITPAYPSMCATHNVGNSTMAVIQQELEKGAQITDEIMVGRRPWKDLFTKHTFFTNGF 368
Query: 352 KNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSS 411
K YL + +++ W G++ESR+R L++ +E VL G + VK
Sbjct: 369 KYYLTVISSSRTKQAQNAWSGFIESRVRLLVNKLEMHPDIVLARPFNKGYDRVHRVKDDR 428
Query: 412 QCHYFMGLG 420
Q +G G
Sbjct: 429 QLEEVVGQG 437
>gi|341895922|gb|EGT51857.1| hypothetical protein CAEBREN_12609 [Caenorhabditis brenneri]
Length = 528
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 175/425 (41%), Positives = 257/425 (60%), Gaps = 22/425 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT D+ T L + L F ++EE+ R++VL L+ VK WI+ GI
Sbjct: 22 ISLAQPTPKDLSLTCSLLQELKSVGSFEAKEETTKRIQVLQFLNATVKKWIQ------GI 75
Query: 64 SDEE----QIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE 119
S + EA ++ +FGSYRLGV DID++ + P +R DFF L +L
Sbjct: 76 SSARLPNGKFFEAGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVSR-TDFFTSLKDILIR 134
Query: 120 TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVL 179
P V++L V A VP++ F+F GV VDLL+A+L +VIP+ +D D+LL N+D+++V
Sbjct: 135 NPNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPDKIDLTDDNLLKNMDQESVR 194
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
SLNG RV +++L LVPN +F TLR ++ WAK G+YSNAMGF GGI WALLVAR CQL
Sbjct: 195 SLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVARTCQL 254
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLC-PIQYQA----MPHHVWDPRSNQRDRKHLMP 294
YPNA P+ LV + F +F+ W +P+P++LC P + +A + + W N DR HLMP
Sbjct: 255 YPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERADMLTLDNLCWG--RNHADRFHLMP 312
Query: 295 IITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNY 354
IITP++P NS++NVS +T+ ++++E A +C +I GK W LFE +F+ +K++
Sbjct: 313 IITPAFPEQNSTHNVSRSTMEVIKKEMADALVICNDIFDGKCDWKFLFEEVNFYSQYKHF 372
Query: 355 LQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCH 414
+ + + AK + G++ESR RQLI ER+ G+ L P + S +Q
Sbjct: 373 VVMKLDAKKEETENSYGGFLESRFRQLIGAFERNR-GIKMAHLNP---KKCQPTSKAQSL 428
Query: 415 YFMGL 419
+F+GL
Sbjct: 429 WFIGL 433
>gi|327293141|ref|XP_003231267.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
gi|326466383|gb|EGD91836.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
Length = 601
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 238/388 (61%), Gaps = 6/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S++ PT ++ L L + F E+ R + L L + ++IK V+ +KG+
Sbjct: 15 LSSALPTPSELAENDALIAELKLQNNFEPPSETEKRKQTLHLLQRVTIEFIKVVSKEKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE---T 120
S + I + K+FT+GSYRLGV GP +DID L V P + R +DFF +L++
Sbjct: 75 S-QAAIDASGGKIFTYGSYRLGVYGPGSDIDTLVVAPKHVMR-EDFFAHFPAVLEKHAPK 132
Query: 121 PLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+E +TPVPDA VP+IK + +G+S+DL++A+L S +P +LD LL LDE+ +
Sbjct: 133 DAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRC 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
+NG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQLY
Sbjct: 193 VNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +V+V +FF+I W WP PV+L I+ + VW+P+ DR HLMPIITP+Y
Sbjct: 253 PQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS-FKNYLQIHI 359
P +++NVS +T ++ E +R ++ ++I G+R W LF + FF + +K YL I+
Sbjct: 313 PSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYLSINS 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
+ + W G VES+LR L+ ++R
Sbjct: 373 TSTSKEAQAIWSGLVESKLRHLVGALDR 400
>gi|326484929|gb|EGE08939.1| Poly(A) polymerase PAPalpha [Trichophyton equinum CBS 127.97]
Length = 601
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 238/388 (61%), Gaps = 6/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S++ PT ++ L L + F E+ R + L L + ++IK V+ +KG+
Sbjct: 15 LSSALPTPSELAENDALIAELKLQNNFEPPSETEKRKQTLHLLQRVTIEFIKVVSKEKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE---T 120
S + I + K+FT+GSYRLGV GP +DID L V P + R +DFF +L++
Sbjct: 75 S-QAAIDASGGKIFTYGSYRLGVYGPGSDIDTLVVAPKHVMR-EDFFAHFPTVLEKHAPK 132
Query: 121 PLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+E +TPVPDA VP+IK + +G+S+DL++A+L S +P +LD LL LDE+ +
Sbjct: 133 DAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRC 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
+NG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQLY
Sbjct: 193 VNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +V+V +FF+I W WP PV+L I+ + VW+P+ DR HLMPIITP+Y
Sbjct: 253 PQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS-FKNYLQIHI 359
P +++NVS +T ++ E +R ++ ++I G+R W LF + FF + +K YL I+
Sbjct: 313 PSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYLSINS 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
+ + W G VES+LR L+ ++R
Sbjct: 373 TSTSKEAQAIWSGLVESKLRHLVGALDR 400
>gi|326471772|gb|EGD95781.1| Poly(A) polymerase PAPalpha [Trichophyton tonsurans CBS 112818]
Length = 601
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 238/388 (61%), Gaps = 6/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S++ PT ++ L L + F E+ R + L L + ++IK V+ +KG+
Sbjct: 15 LSSALPTPSELAENDALIAELKLQNNFEPPSETEKRKQTLHLLQRVTIEFIKVVSKEKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE---T 120
S + I + K+FT+GSYRLGV GP +DID L V P + R +DFF +L++
Sbjct: 75 S-QAAIDASGGKIFTYGSYRLGVYGPGSDIDTLVVAPKHVMR-EDFFAHFPTVLEKHAPK 132
Query: 121 PLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+E +TPVPDA VP+IK + +G+S+DL++A+L S +P +LD LL LDE+ +
Sbjct: 133 DAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRC 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
+NG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQLY
Sbjct: 193 VNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +V+V +FF+I W WP PV+L I+ + VW+P+ DR HLMPIITP+Y
Sbjct: 253 PQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS-FKNYLQIHI 359
P +++NVS +T ++ E +R ++ ++I G+R W LF + FF + +K YL I+
Sbjct: 313 PSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYLSINS 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
+ + W G VES+LR L+ ++R
Sbjct: 373 TSTSKEAQAIWSGLVESKLRHLVGALDR 400
>gi|324975490|gb|ADY62673.1| PAPa [Candida orthopsilosis]
Length = 372
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/367 (42%), Positives = 237/367 (64%), Gaps = 10/367 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDE----KLFASEEESLGRVEVLGRLDGIVKDWIKRVTM 59
IS + PT D KEL +L+ E + SE +L RVEVL L + +D++ V++
Sbjct: 12 ISLTDPTSKD----KELNDLLIKELKVRGSYESEAATLKRVEVLTTLQKLTEDFVYEVSL 67
Query: 60 DKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE 119
K ++ + ++A K+FTFGSYRLGV GPS+DIDAL V P + TR +DFF ++L+
Sbjct: 68 RKNMT-QGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTR-EDFFTVFEKILRG 125
Query: 120 TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVL 179
P +E++ V +A VP+IK +F G+S+DLL+A+L +P DL +LL N+DE+ +
Sbjct: 126 RPELEEINSVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEKDMR 185
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
+LNG RVTD IL LVP F++ LR ++ WA++R +Y+N GF GG+ WA+LVAR+CQL
Sbjct: 186 ALNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVARICQL 245
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
YPNA+ V++ +FF+I++ W WP PV+L I+ + VW+PR DR+H MP+ITP+
Sbjct: 246 YPNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPA 305
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
YP +++N++++T +I+ EF R E+ EI G++ W L E + FF +K YL +
Sbjct: 306 YPSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSFFHQYKFYLCVVA 365
Query: 360 AAKNAGD 366
A K+ +
Sbjct: 366 ATKSNAE 372
>gi|346972005|gb|EGY15457.1| Poly(A) polymerase pla1 [Verticillium dahliae VdLs.17]
Length = 604
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 160/390 (41%), Positives = 242/390 (62%), Gaps = 6/390 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT + + K + + L +K F S E+ R +VL +L I +++K+V +
Sbjct: 14 ISTALPTEAEHATNKTMLEELKQQKTFESPAETQKRHQVLEQLQTICDEFVKQVARKREE 73
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
E I++A ++FT+GS+RLGV GP +DID L V P Y TR D F F L + +
Sbjct: 74 GSEALIKDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTRDDYFEIFPGLLQKMTPAD 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDLD-SLQDS-LLHNLDEQTV 178
+ DL V DA VP+IKF+F G+S+DL+++++ +P+D SL DS LL LDE+ +
Sbjct: 134 AITDLAVVSDAFVPIIKFEFFGISIDLIFSRIASLKQLPKDPQWSLADSNLLRGLDEREL 193
Query: 179 LSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQ 238
SLNG RVTD I++LVP FR LR ++ WA+RR IY+N MGF GG+ WA+LVARVCQ
Sbjct: 194 RSLNGTRVTDEIINLVPEPSTFRLALRAIKLWAQRRAIYANIMGFPGGVAWAMLVARVCQ 253
Query: 239 LYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITP 298
LYP A +V+V++FF I W WP PV+L ++ + VW+P+ + D+ HLMPIITP
Sbjct: 254 LYPKATSSVIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYRGDQFHLMPIITP 313
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS-FKNYLQI 357
+YP +++N++ + + ++Q E QR E+ + + KR W LF + FF S +K Y+ +
Sbjct: 314 AYPSMCATFNITKSAMTVIQRELQRGCEITDNVMLSKRPWGDLFIKHTFFTSGYKYYISV 373
Query: 358 HIAAKNAGDFRQWKGWVESRLRQLIHMIER 387
+ + W G+VES++R L+ +E+
Sbjct: 374 VTTSTTKEAHKIWSGYVESKVRVLVQGLEQ 403
>gi|367050218|ref|XP_003655488.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
gi|347002752|gb|AEO69152.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
Length = 652
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/393 (41%), Positives = 240/393 (61%), Gaps = 12/393 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT + K L L + F S E+ R EVL +L+ I +++R +K
Sbjct: 12 ISTALPTEQEKALNKALHDELRAQGTFESRAETEKRKEVLAQLEKITNAFVQRAAREKHG 71
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
+ I++A ++FT+GSYRLGV GP +D+D L V P Y T F F ++ +
Sbjct: 72 KNAILIRDAIGRVFTYGSYRLGVYGPGSDMDTLVVAPKYVTVEQYFRIFPEVLVEMAPPA 131
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSV-IPEDLD-SLQDS-LLHNLDEQTV 178
+ DLTPVP+A VP+IKF+F+G+S+DL++ +Q + +P D SL D+ LL L E V
Sbjct: 132 AITDLTPVPEAFVPIIKFEFSGISIDLIFCSIQTLIQLPADKSWSLADNNLLRGLSENAV 191
Query: 179 LSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQ 238
SLNG RVTD IL LVP F+ LR ++ WA+R+ IY+N MG+ GG+ WA+LVARVCQ
Sbjct: 192 RSLNGTRVTDEILHLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWAMLVARVCQ 251
Query: 239 LYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA----MPHHVWDPRSNQRDRKHLMP 294
LYP A V+V++FF I W WP PV+L I+Y +P VW+P+ DR H MP
Sbjct: 252 LYPKATSAVIVNKFFNIMLKWPWPLPVLLKDIEYNGPVTRVP--VWNPKLYASDRNHKMP 309
Query: 295 IITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS-FKN 353
IITP+YP +++NV +++ ++Q+E ++ E+ EEI G+R W LF + FF S FK
Sbjct: 310 IITPAYPSMCATHNVGRSSMVVIQQELKKGAEVTEEIMLGRRPWKDLFTKHTFFTSGFKY 369
Query: 354 YLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIE 386
YL + +++ W G++ESR+R L++ IE
Sbjct: 370 YLTVISSSRTKKAQNVWSGFIESRVRLLVNKIE 402
>gi|341895839|gb|EGT51774.1| hypothetical protein CAEBREN_25710 [Caenorhabditis brenneri]
Length = 527
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 174/431 (40%), Positives = 258/431 (59%), Gaps = 14/431 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT D+ T L + L F +EE+ R++VL L+ VK WI+ ++ +
Sbjct: 21 ISLAQPTPKDLSLTCSLLQELKSFGSFEEKEETTKRIQVLQFLNATVKKWIQSISATR-- 78
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ EA ++ +FGSYRLGV DID++ + P TR DFF L +L P V
Sbjct: 79 LPNGKFFEAGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVTR-SDFFTSLKDILLRNPNV 137
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
++L V A VP++ F+F GV VDLL+A+L +VIPE +D D+LL N+D+++V SLNG
Sbjct: 138 KNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQESVRSLNG 197
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RV +++L LVPN +F TLR ++ WAK G+YSNAMGF GGI WALLVAR CQLYPNA
Sbjct: 198 VRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVARTCQLYPNA 257
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLC-PIQYQ----AMPHHVWDPRSNQRDRKHLMPIITP 298
P+ LV + F +F+ W +P+P++LC P + + + + W N DR HLMPIITP
Sbjct: 258 SPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLTLDNLCWG--RNHADRFHLMPIITP 315
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIH 358
++P NS++NVS +T+ ++++E A +C ++ GK W LFE +F+ +K+++ +
Sbjct: 316 AFPEQNSTHNVSRSTMEVIKKEMADALVICNDVFEGKCDWKHLFEELNFYSQYKHFVVLK 375
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMG 418
+ AK + G++ESRLR L+ ER+ G L L P + S +Q +F+G
Sbjct: 376 LDAKKEETENSYGGFLESRLRVLVGAFERNRGIKL-AHLNP---KKCQPTSKAQSLWFIG 431
Query: 419 LGRKQGVSPQD 429
L + V D
Sbjct: 432 LEFDEVVKNMD 442
>gi|341899970|gb|EGT55905.1| hypothetical protein CAEBREN_16296 [Caenorhabditis brenneri]
Length = 526
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 174/431 (40%), Positives = 260/431 (60%), Gaps = 14/431 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT D+ T L + L F ++EE+ R++VL L+ VK WI+ ++ +
Sbjct: 20 ISLANPTPQDLSLTCSLLQELKSFGSFEAKEETTKRIQVLQFLNVTVKKWIQGISAAR-- 77
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ EA ++ +FGSYRLGV DID++ + P TR DFF L +L P V
Sbjct: 78 LPNGKFFEAGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVTR-TDFFTSLKDILIRNPNV 136
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
++L V A VP++ F+F GV VDLL+A+L +VIP+ +D D+LL N+D+++V SLNG
Sbjct: 137 KNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPDKIDLTDDNLLKNMDQKSVRSLNG 196
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RV +++L LVPN +F TLR ++ WAK G+YSNAMGF GGI WA+LVAR CQLYPNA
Sbjct: 197 VRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWAILVARTCQLYPNA 256
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLC-PIQYQ----AMPHHVWDPRSNQRDRKHLMPIITP 298
P+ LV + F +F+ W +P+P++LC P + + A+ + W N DR HLMPIITP
Sbjct: 257 SPSRLVQKVFYVFSTWNYPSPIVLCMPTRERSDMLALDNLCWG--RNHADRFHLMPIITP 314
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIH 358
++P NS++NVS +T+ ++++E A +C +I GK W LFE +F+ +K+++ +
Sbjct: 315 AFPEQNSTHNVSRSTMEVIKKEMADALVICNDIFEGKSDWKFLFEEVNFYSQYKHFVVMK 374
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMG 418
+ AK + G++ESRLR L+ ER+ G L L P + S +Q +F+G
Sbjct: 375 LDAKKEETENSYGGFLESRLRVLVGAFERNRGIKL-AHLNP---KKCQPTSKAQSIWFIG 430
Query: 419 LGRKQGVSPQD 429
L + V D
Sbjct: 431 LEFDEVVKNMD 441
>gi|429852211|gb|ELA27357.1| poly polymerase [Colletotrichum gloeosporioides Nara gc5]
Length = 632
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 155/392 (39%), Positives = 242/392 (61%), Gaps = 8/392 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEES--LG--RVEVLGRLDGIVKDWIKRVTM 59
IST+ PT L+ + + L + L + F + + + LG R +V+ L I +++KRV
Sbjct: 14 ISTALPTELENQAKEALIEELKKQNTFETRQSNPFLGESRYQVINHLQQICDEFVKRVAR 73
Query: 60 DKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRML 117
+ +E I++A ++FT+GS+RLGV GP +DID L V P Y TR D F F L + +
Sbjct: 74 KREEGNEALIRDARGQIFTYGSFRLGVYGPGSDIDTLVVAPKYVTRSDYFEIFPGLLKEM 133
Query: 118 QETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDLDSLQDSLLHNLDEQ 176
+ + D+ V DA VP+IKF+F G+S+DL+++++ +P++ + LL LDE
Sbjct: 134 APSDAITDMAVVEDAFVPIIKFEFFGISIDLIFSRIAMLKQLPKEFNVQDSGLLRGLDEA 193
Query: 177 TVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARV 236
+ SLNG RVTD ILSLVP F+ LR ++ WA+RR IY+N MGF GG+ WA+LVARV
Sbjct: 194 ELRSLNGTRVTDEILSLVPEEATFKLALRAIKLWAQRRAIYANIMGFPGGVAWAMLVARV 253
Query: 237 CQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPII 296
CQLYP A +V+V++FF I W WP PV+L ++ + VW+P+ + D+ HLMP+I
Sbjct: 254 CQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKNVEGGPLQVRVWNPKVYKGDQFHLMPVI 313
Query: 297 TPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYL 355
TP+YP ++YN++ + + ++Q+E R E+ + I GK W LF + FF +K Y+
Sbjct: 314 TPAYPSMCATYNITRSAMTVIQQELTRGCEITDNIMVGKNPWSDLFVKHTFFTQGYKYYI 373
Query: 356 QIHIAAKNAGDFRQWKGWVESRLRQLIHMIER 387
+ A+ + + W G+VES++R L+ +E+
Sbjct: 374 SVITASTDKEAHKIWSGYVESKVRVLVQGLEQ 405
>gi|255930343|ref|XP_002556731.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581344|emb|CAP79117.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 590
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 165/389 (42%), Positives = 237/389 (60%), Gaps = 8/389 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST PT ++ + +L L + F E+ R +VL L + ++++ V+ KG+
Sbjct: 15 ISTVLPTKDELSANDDLIAELKAQNNFELPTETERRKQVLQLLQRVTVEFVQVVSRKKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGK----LFRMLQE 119
S ++ + K+FT+GSYRLGV GP +DID L VGP + DDFF + L RM E
Sbjct: 75 S-PAAVEASGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVL-IDDFFAEFPPVLERMASE 132
Query: 120 TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVL 179
+E +TPVPDA VP+IK + G+S+DL++A+L IP +LD + L LDE+ V
Sbjct: 133 G-AIEKMTPVPDAFVPIIKLELCGISIDLIFARLVIPSIPMNLDLKNNDYLRGLDEREVR 191
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
SLNG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVARVCQL
Sbjct: 192 SLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQL 251
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
YP A +V+V +FF+I W WP PV+L I+ + VW+P+ DR HLMPIITP+
Sbjct: 252 YPQATGSVIVGKFFRIMNKWNWPQPVLLKQIEDGPLQIKVWNPKIYHGDRFHLMPIITPA 311
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIH 358
YP +++N+S +T ++ E QR ++ ++I + +W LF + FF +K YL I
Sbjct: 312 YPSMCATHNISMSTKAVILRELQRGGDMVDKIFMKQLSWHDLFARHTFFTHDYKYYLSIT 371
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIER 387
++K W G VES+LR L+ ++R
Sbjct: 372 ASSKTKEAESVWSGLVESKLRHLVGALDR 400
>gi|336268304|ref|XP_003348917.1| hypothetical protein SMAC_01938 [Sordaria macrospora k-hell]
gi|380094176|emb|CCC08393.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 632
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 166/391 (42%), Positives = 241/391 (61%), Gaps = 8/391 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT + T L K L + F S+ E+ R VL L I +++KR +
Sbjct: 14 ISTALPTDAEKRQTDALFKELRAQGTFESQAETEKRWAVLADLQRITDEFVKRAAQESEP 73
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYAT--RHDDFFGKLFRMLQETP 121
+ I++A ++FT+GS+RLGV GP +DID L V P Y T ++ D F KL +
Sbjct: 74 HNSILIRDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTVKQYFDIFPKLLEEMAPPG 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQ-FSVIPEDLD--SLQDSLLHNLDEQTV 178
+ DLTPVP+A VP+IKF+++G+S+DL++ +Q +P+D + ++LL L E V
Sbjct: 134 AITDLTPVPEAFVPIIKFEYSGISIDLIFCSIQSLRQLPDDKEWNLNNNNLLRGLSENEV 193
Query: 179 LSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQ 238
SLNG RVTD IL+LVP + F+ LR ++ WA+RR IY+N MG+ GG+ WA+LVARVCQ
Sbjct: 194 RSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGVAWAMLVARVCQ 253
Query: 239 LYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQY-QAMPH-HVWDPRSNQRDRKHLMPII 296
LYP A V+V +FF I +W WP PV+L I+Y Q++ VW+P+ DR H MPII
Sbjct: 254 LYPKATSAVVVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRNHKMPII 313
Query: 297 TPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYL 355
TPSYP +++NV +++ ++Q+E +R ++ EEI GKR W LFE + FF FK YL
Sbjct: 314 TPSYPSMCATHNVGRSSMAVIQQELERGVQIAEEIMLGKRPWKDLFEKHTFFTNGFKFYL 373
Query: 356 QIHIAAKNAGDFRQWKGWVESRLRQLIHMIE 386
+ + + W G+VESR+R L+ +E
Sbjct: 374 TVISSGRTKEAQNTWSGFVESRVRVLVQKLE 404
>gi|392870480|gb|EAS32287.2| Poly(A) polymerase PAPalpha [Coccidioides immitis RS]
Length = 599
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 234/388 (60%), Gaps = 6/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT ++ L L + F + E+ R ++L + + +++K V KG+
Sbjct: 15 ISTALPTPSELAENDNLIAELKRQNNFEAPSETEKRNQMLHLIQRVTVEFVKTVGRRKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHD---DFFGKLFRMLQET 120
S + I + K+F +GSYRLGV GP +DID L VGP + D DF L RM +
Sbjct: 75 S-QAAIDVSGGKIFAYGSYRLGVYGPGSDIDTLVVGPKHVAIEDFFLDFPPTLERMAPKD 133
Query: 121 PLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+E LTPVPDA VP+IK + +G+S+DL++A+L IP DLD LL LDE+ +
Sbjct: 134 S-IEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNKELLRGLDEREIRC 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
+NG RVTD IL LVP + FR LR ++ WA+ R IYSN +GF GG+ WA+LVARVCQLY
Sbjct: 193 VNGTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGVAWAMLVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +V+V +FF+I +W WP PV+L PI+ + VW+P+ DR HLMPIITP+Y
Sbjct: 253 PQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHI 359
P +++NVS +T ++ E +R ++ E+I G+ W LF + FF +K YL I
Sbjct: 313 PSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSKDYKYYLNITA 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
++ + W G VE++LR L+ +++
Sbjct: 373 SSTSKEAQSVWSGLVEAKLRHLVIALDK 400
>gi|303317852|ref|XP_003068928.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108609|gb|EER26783.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 599
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 159/387 (41%), Positives = 231/387 (59%), Gaps = 4/387 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT ++ L L + F + E+ R ++L + + +++K V KG+
Sbjct: 15 ISTALPTPSELAENDNLIAELKRQNNFEAPSETEKRNQMLHLIQRVTVEFVKTVGRRKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
S + I + K+F +GSYRLGV GP +DID L VGP + D F F L
Sbjct: 75 S-QAAIDVSGGKIFPYGSYRLGVYGPGSDIDTLVVGPKHVAIEDFFLDFPPTLERLAPKD 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
+E LTPVPDA VP+IK + +G+S+DL++A+L IP DLD LL LDE+ + +
Sbjct: 134 SIEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNKELLRGLDEREIRCV 193
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RVTD IL LVP + FR LR ++ WA+ R IYSN +GF GG+ WA+LVARVCQLYP
Sbjct: 194 NGTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGVAWAMLVARVCQLYP 253
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
A +V+V +FF+I +W WP PV+L PI+ + VW+P+ DR HLMPIITP+YP
Sbjct: 254 QATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYP 313
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHIA 360
+++NVS +T ++ E +R ++ E+I G+ W LF + FF +K YL I +
Sbjct: 314 SMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSKDYKYYLNITAS 373
Query: 361 AKNAGDFRQWKGWVESRLRQLIHMIER 387
+ + W G VE++LR L+ +++
Sbjct: 374 STSKEAQSVWSGLVEAKLRHLVIALDK 400
>gi|406868090|gb|EKD21127.1| Poly(A) polymerase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 579
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 181/525 (34%), Positives = 282/525 (53%), Gaps = 56/525 (10%)
Query: 19 ELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFT 78
EL L + + + EE+ R VL L I ++++++VT +G S E ++ A K+ T
Sbjct: 30 ELISELKRQNNYETPEETAKRSAVLKSLQAITEEFVRQVTRAQG-SAESAVKSAGGKIET 88
Query: 79 FGSYRLGVAGPSTDIDALCVGPCYATRHD--DFFGKLFRMLQETPLVEDLTPVPDARVPV 136
FGS++LGV GP +DID L V P T+ + FF ++ + +L PDA VP+
Sbjct: 89 FGSFKLGVIGPGSDIDTLVVVPKNITKAEFFQFFPEIMEKSTPPGTITELMSKPDAYVPI 148
Query: 137 IKFKFNGVSVDLLYAQL-QFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVP 195
+ FKF+GV +DLL+ ++ + IP+DL LL L+EQ SLNG RV D +L+LVP
Sbjct: 149 LTFKFSGVDIDLLFGRIASLNQIPKDLKMTDHDLLRGLEEQEARSLNGVRVADEMLTLVP 208
Query: 196 NIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKI 255
+ FR+ LR ++ W+ RRGI N GF GG+ WA+LVARVCQLYP A + +V +FFKI
Sbjct: 209 QTKVFRTALRTIKLWSARRGIVGNIYGFPGGVAWAILVARVCQLYPKATGSTIVMKFFKI 268
Query: 256 FAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLR 315
W+WP PV+L I+ + VW+P+ N DR+H+MPIITP+YP +++NV+ +T+
Sbjct: 269 IDKWQWPQPVLLKNIETGTLNLQVWNPQINHTDRRHIMPIITPAYPSMCTTHNVTRSTMA 328
Query: 316 IMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQIHIAAKNAGDFRQWKGWV 374
++ +E +R E+ + + GK W LFE + FF S+K YL I A+ ++ +W G+V
Sbjct: 329 VIHKELKRGGEIADRVMMGKAKWKDLFEKHTFFTSSYKYYLCIITASTSSEAQTKWAGFV 388
Query: 375 ESRLRQLI-HMIERDMGGVLQ-----------CR--------------LYPGDFSENS-- 406
ES++R L+ + E+ + Q CR Y D +
Sbjct: 389 ESKVRLLVGKLTEQTSIAIAQPFNKGYNRAHRCRTDQQVEEVKTGSLEYYAKDIGTATTG 448
Query: 407 --------VKSSSQCHYFMGLGRKQ-----------GVSPQDGEK-FDMRLTVEEFKSHV 446
+K + C + G ++ G+ +G K D+ VE+FK H
Sbjct: 449 HGLAVGALLKDEATCEHESTNGDEKLTMVYTTTHYIGLKLHEGAKSLDLSWHVEDFK-HT 507
Query: 447 VWMYSSWKQGMQ-IHVSHLRCQDIPDFVF-PGGVRPPKSLNEKKR 489
+ +K + +H+SH + D+PD +F G V+P K +K+
Sbjct: 508 CSGWDQYKDDVNALHISHKKNYDLPDDLFDEGDVKPVKPARPQKK 552
>gi|407919057|gb|EKG12314.1| hypothetical protein MPH_10619 [Macrophomina phaseolina MS6]
Length = 590
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 157/388 (40%), Positives = 235/388 (60%), Gaps = 6/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT ++ L L + F + EE+ R L L V+++++ V KG+
Sbjct: 15 ISRAPPTDAELALDATLLDELRSQNTFEAPEETEKRGAALQTLQKAVEEFVRHVGQVKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP-- 121
+ I A K+ TFGSYRLGV GP +DID L + P + TR DDFF +L+
Sbjct: 75 A-PSVIDNAGGKICTFGSYRLGVYGPGSDIDTLVLAPKHVTR-DDFFAHFINVLERVAPS 132
Query: 122 -LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+E +PVPDA P+IK F G+ +DL++A+L + +P DLD +SLL LDE + S
Sbjct: 133 GAIEKFSPVPDAFTPIIKMDFMGIDIDLIFARLAIASVPLDLDLKDNSLLRGLDETDLRS 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
+NG RVTD +LSLVP + FR R ++ WA+RR IY+N +GF GGI WA++VAR+CQLY
Sbjct: 193 VNGTRVTDEVLSLVPQPKIFRQVTRAVKLWAQRRAIYANIVGFPGGIAWAMMVARICQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A V++ RFF + + W WP P+ML I+ + VW+P+ D++HLMPIITP+Y
Sbjct: 253 PMACAAVVLGRFFYLMSTWPWPRPIMLKEIEDGPLQVRVWNPQIYPGDKRHLMPIITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHI 359
P +++N++ +T ++++ E RA ++ +I + KR W LF+ + FF FK YL I
Sbjct: 313 PSMCATHNITHSTQKVIKRELLRASQITSDILSEKRRWRDLFDRHTFFTQDFKYYLSIVA 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
A+ + W VES++R+L+ +IE+
Sbjct: 373 ASHDKEAQDNWSSSVESKVRKLVGLIEQ 400
>gi|196011858|ref|XP_002115792.1| hypothetical protein TRIADDRAFT_30173 [Trichoplax adhaerens]
gi|190581568|gb|EDV21644.1| hypothetical protein TRIADDRAFT_30173, partial [Trichoplax
adhaerens]
Length = 405
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 172/392 (43%), Positives = 240/392 (61%), Gaps = 6/392 (1%)
Query: 13 DVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEA 72
D+ T L + ++ + S +E R+ VL +++ +VK WI V++ K +
Sbjct: 1 DIKLTDALIQAIIPFDVIESNDEMQHRMNVLAKVNQLVKQWIVDVSLSKNMP-LSIANSV 59
Query: 73 NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDA 132
+FTFGSYRLGV DIDALCV P + R FF +L+ V +T V DA
Sbjct: 60 GGNVFTFGSYRLGVHTKGADIDALCVAPRHVDR-TSFFASFVDLLKSQTEVTQITVVEDA 118
Query: 133 RVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILS 192
VPVIK F+G+ +D+L+A+L IPE+LD L LL NLD + V SLNGCRVTD ILS
Sbjct: 119 FVPVIKMVFDGIEMDMLFARLGLQNIPENLDLLDLELLRNLDMKCVRSLNGCRVTDAILS 178
Query: 193 LVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRF 252
LVPN +FR+ LR ++ WAKRRGIYSNA+G+LGG++WA+LVAR CQLYPNA+ +V +F
Sbjct: 179 LVPNADSFRTALRFIKLWAKRRGIYSNALGYLGGVSWAMLVARTCQLYPNAVAATIVQKF 238
Query: 253 FKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSST 312
F +F W W PV+L + + + W P SN DR LM IITP YP NS++NVS +
Sbjct: 239 FLVFNQWNWQQPVLLTRMVESDLNLNGWTP-SNFSDRSQLMQIITPVYPHQNSTFNVSKS 297
Query: 313 TLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKG 372
T I+ EE +R ++C EI W FEP FFG +K+Y+ + A + ++++W G
Sbjct: 298 TKTILLEEIERGLKICNEIFLRNAKWTDAFEPADFFGRYKHYIVLTAKATSEDNYKEWIG 357
Query: 373 WVESRLRQLIHMIERD-MGGVLQC--RLYPGD 401
VES+LR+L+ +ER+ ++ + YPGD
Sbjct: 358 LVESKLRKLVLTLERNEYFDIVHINPKSYPGD 389
>gi|402077328|gb|EJT72677.1| Poly(A) polymerase pla1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 633
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 159/390 (40%), Positives = 236/390 (60%), Gaps = 6/390 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S S P+ ++ +T L L + F S E+ R VL L I ++K V ++
Sbjct: 13 VSVSLPSEFELQATDALLAELRAQNSFESPLETEKRHRVLASLQTIADAFVKVVAKEREP 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
+ I++A AK+F +GS RLGV GP +DID L VGP Y TR D F F L +
Sbjct: 73 HNAVLIKDARAKVFAYGSLRLGVWGPGSDIDTLVVGPRYVTREDYFQHFPDLLVKMAPPG 132
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQ-FSVIPED--LDSLQDSLLHNLDEQTV 178
+ DLT V +A VP+IKF+++G+S+DL+++++ +P D D+LL LDE+ +
Sbjct: 133 AITDLTVVEEAFVPIIKFEYHGISIDLIFSRIATLKQLPSDPAWGLKDDNLLRGLDEKEL 192
Query: 179 LSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQ 238
S+NG RVTD ILSLVP FR+ LR ++ WA+RR IY N MGF GG+ WA+LVARVCQ
Sbjct: 193 RSVNGTRVTDEILSLVPEQNIFRTALRAIKLWAQRRAIYGNIMGFPGGVAWAMLVARVCQ 252
Query: 239 LYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITP 298
LYP A +V+V++FF I W WP PV+L PI + VW+PR + D HLMP+ITP
Sbjct: 253 LYPKATSSVIVNKFFSILLQWPWPQPVLLKPIGDGPLQVRVWNPRVYKGDSYHLMPVITP 312
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQI 357
+YP +++NV+ +++ +++ E Q A E+ I + W +F + FF FK Y+Q+
Sbjct: 313 AYPSMCATFNVTRSSMTVIKRELQLAAEITNNIMCSTKPWKDMFAKHTFFTKDFKYYMQV 372
Query: 358 HIAAKNAGDFRQWKGWVESRLRQLIHMIER 387
A+++ + W G+VES++R L+ +ER
Sbjct: 373 ISASRDKEAHKIWSGFVESKVRMLVQSLER 402
>gi|380471549|emb|CCF47226.1| hypothetical protein CH063_04087 [Colletotrichum higginsianum]
Length = 619
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 240/392 (61%), Gaps = 8/392 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRV----EVLGRLDGIVKDWIKRVTM 59
IS++ PT + + + L L + F S ++ R +VL L I +++KRV
Sbjct: 14 ISSALPTEAENHAMQTLIDELRRQNTFESPADTQKRQMPSEKVLEHLARICDEFVKRVAR 73
Query: 60 DKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRML 117
++ ++ I++A K+FT+GSYRLGV GP +DID L V P Y TR D F F L + +
Sbjct: 74 EREKGNDALIRDARGKIFTYGSYRLGVYGPGSDIDTLVVAPKYVTRADYFEIFPDLLKEM 133
Query: 118 QETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDLDSLQDSLLHNLDEQ 176
+ D+ V DA VP+IKF+F+G+S+DL+++++ +P+D + LL LDE
Sbjct: 134 APPGAITDMAVVADAFVPIIKFEFSGISIDLIFSRIAMLKQLPKDFNVQDSGLLRGLDEA 193
Query: 177 TVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARV 236
+ SLNG RVTD ILSLVP F+ LR ++ WA+RR IY+N MGF GG+ WA+LVARV
Sbjct: 194 ELRSLNGTRVTDEILSLVPEQATFKLALRAIKLWAQRRAIYANIMGFPGGVAWAMLVARV 253
Query: 237 CQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPII 296
CQLYP A +V+V++FF I W WP PV+L ++ + VW+P+ + D+ HLMP+I
Sbjct: 254 CQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKQVEGGPLQVRVWNPKLYKGDQFHLMPVI 313
Query: 297 TPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYL 355
TP+YP ++YN++ + + ++Q+E QR ++ + I G+ W LF + FF +K Y+
Sbjct: 314 TPAYPSMCATYNITRSAMTVIQQELQRGCDITDAIMLGRNPWSDLFVKHTFFTQGYKYYI 373
Query: 356 QIHIAAKNAGDFRQWKGWVESRLRQLIHMIER 387
+ ++ + + W G+VES++R L+ +E+
Sbjct: 374 SVITSSTDKEAHKVWSGYVESKVRVLVQGLEQ 405
>gi|256066067|ref|XP_002570474.1| poly(A) polymerase [Schistosoma mansoni]
gi|350644967|emb|CCD60333.1| poly(A) polymerase, putative [Schistosoma mansoni]
Length = 496
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 177/428 (41%), Positives = 248/428 (57%), Gaps = 23/428 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S PT D T+ELE L +F ++EE R E L RL I WI++ +++ +
Sbjct: 22 LSFKKPTEQDFRDTQELEASLAQLNIFETQEEISQRREALVRLQEISNAWIRQKALEQNL 81
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
K+FTFGSYRLGV DID+L V P + TR ++FF +L E V
Sbjct: 82 P-AHVANSTTGKIFTFGSYRLGVNFRGADIDSLLVVPRFITR-EEFFSDFQTVLAENSNV 139
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDS--LLHNLDEQTVLSL 181
EDL V DA VPV+K KF GV +DLL+AQ+ IPE+ +++ L+ N+DE+ V S+
Sbjct: 140 EDLHAVVDAFVPVLKMKFMGVEIDLLFAQIDQMSIPENFSLCENTEVLMRNMDERDVRSI 199
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RVT+ IL+LV N +F+ L+ +R WAKRR +YSNA+GFLGG++WA+LV+R+CQLYP
Sbjct: 200 NGVRVTEDILNLVYNKNSFKVALKVIRIWAKRRNVYSNALGFLGGVSWAILVSRICQLYP 259
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA---MPHHVWDPRSNQRDRKHLMPIITP 298
A P+++V FF IF+ W WP PV L +Y A +P VWDPR N D+ HLMPI+TP
Sbjct: 260 YATPSMIVYLFFTIFSQWPWPKPVRLRECEYIASLCLP--VWDPRLNPSDQYHLMPILTP 317
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIH 358
SYP NS+YNV + I++ E ++ + K +W LFE FF +++Y+ +
Sbjct: 318 SYPSQNSTYNVQRSNRIIIERELKQGLNVVRASMMHKGSWSNLFEAAFFF-QYRHYVVVI 376
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERD----MGGVLQCRLY---PGDFSENSVKSSS 411
+ F + G VESRLR L+ E + M V C Y P D N V+
Sbjct: 377 VVGNTKHTFIELCGLVESRLRVLVSNFEVNRYVKMAHV-NCHAYGKGPSDDDANFVRK-- 433
Query: 412 QCHYFMGL 419
+F+G+
Sbjct: 434 ---WFIGM 438
>gi|347827997|emb|CCD43694.1| similar to Poly(A) polymerase [Botryotinia fuckeliana]
Length = 573
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 159/387 (41%), Positives = 237/387 (61%), Gaps = 5/387 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+ST+ PT + +T L + + E LF S ++ R VL L I ++++KRV + +
Sbjct: 15 LSTALPTDAEKQATDALIEEMTKENLFESRADTEKRSAVLASLQSITEEFVKRVCRKQNL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
E + A ++FT+GS+RLGV GP +DID L V P +R + F F L +
Sbjct: 75 P-ENIVNNAGGRIFTYGSFRLGVYGPGSDIDTLVVVPKNVSREEYFELFPDLLVEMAPEG 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQ-FSVIPEDLDSLQDSLLHNLDEQTVLS 180
+EDLTPVP+A VP+IKF+++G+S+DL++A+++ + I L D+LL LDE + S
Sbjct: 134 AIEDLTPVPEAFVPIIKFEYSGISIDLIFARIEVLTQISRSLSLNDDNLLTGLDEAGLRS 193
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RVTD IL+LVP FR+ LR ++ WA+RR IY+N MGF GG+ WA+LVARVCQLY
Sbjct: 194 LNGTRVTDDILNLVPEKAVFRTALRGVKLWAQRRAIYANIMGFPGGVAWAMLVARVCQLY 253
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A + ++ +FF+I + W+WP PV+L I+ + VW+PR + D HLMPIITPSY
Sbjct: 254 PQATASTVILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRVYKGDGYHLMPIITPSY 313
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQIHI 359
P +++N++ +T I+ E R + + I GK +W LF + FF ++K YL +
Sbjct: 314 PSMCATHNITKSTKEIICRELARGGNITDRIMTGKASWKDLFVKHTFFTKNYKYYLSVIS 373
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIE 386
A+ W G VES++R L+ +E
Sbjct: 374 ASTTKEAQLIWAGLVESKVRLLVANVE 400
>gi|258563094|ref|XP_002582292.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
gi|237907799|gb|EEP82200.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
Length = 616
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 152/352 (43%), Positives = 216/352 (61%), Gaps = 4/352 (1%)
Query: 39 RVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCV 98
R ++L L + ++IK V KG+S + I A K+FTFGSYRLGV GP +DID L V
Sbjct: 67 RKQILHLLQRVTIEFIKSVGRKKGLS-QGAIDAAGGKIFTFGSYRLGVYGPGSDIDTLVV 125
Query: 99 GPCYATRHDDF--FGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFS 156
GP + TR D F F L +E LT VPDA VP++K + +G+S+DL++A+L
Sbjct: 126 GPKHVTREDFFADFPSTLEQLAPKDSIEKLTSVPDAFVPIMKLELSGISIDLIFARLVVH 185
Query: 157 VIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGI 216
+P +LD LL LDE+ + +NG RVTD IL LVP + FR LR ++ WA+ R I
Sbjct: 186 SVPLNLDLKNKELLRGLDERELRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQSRAI 245
Query: 217 YSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMP 276
YSN +GF GG+ WA+LVARVCQLYP A +V++ +FF+I W WP PV+L PI+ +
Sbjct: 246 YSNVVGFPGGVAWAMLVARVCQLYPQATGSVIIGKFFRIMNQWNWPQPVLLKPIEDGPLH 305
Query: 277 HHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKR 336
VW+P+ DR HLMPIITP+YP +++N+S +T ++ E +R ++ ++I G+
Sbjct: 306 MKVWNPKIYHGDRFHLMPIITPAYPSMCATHNISLSTKAVILRELKRGGDIVDKIFMGQL 365
Query: 337 TWITLFEPYHFFG-SFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIER 387
W LF + FF +K YL I ++ W G VES+LR L+ ++R
Sbjct: 366 RWSDLFAKHSFFSKDYKYYLSITASSTTKEAQSVWSGLVESKLRHLVLALDR 417
>gi|86171578|ref|XP_966239.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
gi|46361205|emb|CAG25069.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
Length = 631
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 167/448 (37%), Positives = 255/448 (56%), Gaps = 34/448 (7%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS + P+ D+ + ++ ++L LF E R VLG ++ + +++ +++++
Sbjct: 86 EPISLNYPSEEDIKRSNDVVELLKGYNLFEEESGLKKRENVLGMINKLFHEFLIELSINQ 145
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
GIS+EE + L+TFGSYRLGV P++DID + + P TR + FF + + LQ+
Sbjct: 146 GISEEEA-NNISGNLYTFGSYRLGVITPNSDIDCIFLAPQNLTR-EIFFNEFYLKLQQDR 203
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSL-QDSLLHNLDEQTVLS 180
V+ L +P+ P+I+F ++ V +DLL A L + + + SL D +L NLDE TV S
Sbjct: 204 NVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYKTLKDCYYSLDNDHILKNLDEVTVRS 263
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RV D IL+ VPN FR+TLR ++ WAK RGIYSN +GFLGGI+WALL A++CQLY
Sbjct: 264 LNGIRVADLILNSVPNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGISWALLTAKICQLY 323
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMP----HHVWDPRSNQRDRKHLMPII 296
PN + L+ +FFK+++ W W PV+L I+ + VWDP N +D+ H+MPII
Sbjct: 324 PNFNVSQLICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMPII 383
Query: 297 TPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRT------------------- 337
TP++PC NS++NV+ T I+ EEF+RA + + +E
Sbjct: 384 TPAFPCMNSTHNVTYCTRNILIEEFKRAHSIIQYMEDENNIKSSIRMNKLWPNNNVNNIN 443
Query: 338 ------WITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGG 391
W+T+ EP F ++K++L I I N + WKGW+ES++R L +E
Sbjct: 444 NSSNNVWMTILEPLDLFSTYKHFLHIQIMGINEFIYNSWKGWIESKIRLLFKKLE--TIN 501
Query: 392 VLQCRLYPGDFSENSVKSSSQCHYFMGL 419
L+ R +P + KS +F+ L
Sbjct: 502 ELKIRPFPKFYFYKKEKSYYCSSFFIAL 529
>gi|367027594|ref|XP_003663081.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
gi|347010350|gb|AEO57836.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
Length = 654
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 169/429 (39%), Positives = 252/429 (58%), Gaps = 16/429 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT + L + L + F S E+ R EVL +L+ I +++R +K
Sbjct: 12 ISTALPTEEEKRLNNALHQELRAQGTFESPAETEKRKEVLRQLEKITNVFVQRAAAEKEP 71
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
+ I++A ++FT+GSYRLGV GP +D+D L V P Y T F F ++ +
Sbjct: 72 KNTILIRDAIGRVFTYGSYRLGVYGPGSDMDTLVVAPKYVTVEQYFRIFPEVLVEMAPPG 131
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQ-FSVIPEDLD-SLQDS-LLHNLDEQTV 178
+ DLTPVP+A VP+IKF+F+G+S+DL++ +Q +P D + SL D+ LL L E V
Sbjct: 132 AITDLTPVPEAFVPIIKFEFSGISIDLIFCSIQTLKQLPADKNWSLADNNLLRGLSENEV 191
Query: 179 LSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQ 238
SLNG RVTD IL+LVP F+ LR ++ WA+R+ IY+N MG+ GG+ WA+LVARVCQ
Sbjct: 192 RSLNGTRVTDDILNLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWAMLVARVCQ 251
Query: 239 LYPNALPNVLVSRFFKIFAHWKWPNPVML------CPIQYQAMPHHVWDPRSNQRDRKHL 292
LYP A V+V++FF I W WP PV+L CP+ A VW+P+ DR H
Sbjct: 252 LYPKATSAVIVNKFFHIMLKWPWPLPVLLKDIEYGCPVTRVA----VWNPKIYASDRNHR 307
Query: 293 MPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS-F 351
MPIITPSYP +++NV +++ ++++E ++ ++ E+I GKR W LF + FF S F
Sbjct: 308 MPIITPSYPSMCATHNVGRSSMAVIKDELEKGVQVTEDIMRGKRPWKDLFTKHTFFTSGF 367
Query: 352 KNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSS 411
+ YL + +++ W G+VESR+R L++ +E L G E+ K+++
Sbjct: 368 RYYLTVISSSRTKKAQNVWSGFVESRVRLLVNKLEMHPSISLARPFNKGYDREHRCKNNA 427
Query: 412 QCHYFMGLG 420
Q + LG
Sbjct: 428 QLEEVVSLG 436
>gi|302409142|ref|XP_003002405.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
gi|261358438|gb|EEY20866.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
Length = 575
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 157/383 (40%), Positives = 238/383 (62%), Gaps = 6/383 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT + + K + + L +K F S E+ R +VL +L I +++K+V +
Sbjct: 14 ISTALPTDAEHATNKTMLEELKQQKTFESPAETQKRHQVLEQLQTICDEFVKQVARKREE 73
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
E I++A ++FT+GS+RLGV GP +DID L V P Y TR D F F L + +
Sbjct: 74 GSEALIKDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTRDDYFEIFPGLLQKMTPAD 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDLD-SLQDS-LLHNLDEQTV 178
+ DL V DA VP+IKF+F G+S+DL+++++ +P+D SL DS LL LDE+ +
Sbjct: 134 AITDLAVVSDAFVPIIKFEFFGISIDLIFSRIASLKQLPKDPQWSLADSNLLRGLDEREL 193
Query: 179 LSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQ 238
SLNG RVTD I++LVP FR LR ++ WA+RR IY+N MGF GG+ WA+LVARVCQ
Sbjct: 194 RSLNGTRVTDEIINLVPEPSTFRLALRAIKLWAQRRAIYANIMGFPGGVAWAMLVARVCQ 253
Query: 239 LYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITP 298
LYP A +V+V++FF I W WP PV+L ++ + VW+P+ + D+ HLMPIITP
Sbjct: 254 LYPKATSSVIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYRGDQFHLMPIITP 313
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS-FKNYLQI 357
+YP +++N++ + + ++Q E QR E+ + + KR W LF + FF S +K Y+ +
Sbjct: 314 AYPSMCATFNITKSAMTVIQRELQRGCEITDNVMLSKRPWGDLFIKHTFFTSGYKYYISV 373
Query: 358 HIAAKNAGDFRQWKGWVESRLRQ 380
+ + W G+VES++++
Sbjct: 374 VTTSTTKEAHKIWSGYVESKVQE 396
>gi|170051830|ref|XP_001861944.1| poly a polymerase [Culex quinquefasciatus]
gi|167872900|gb|EDS36283.1| poly a polymerase [Culex quinquefasciatus]
Length = 631
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 154/349 (44%), Positives = 214/349 (61%), Gaps = 9/349 (2%)
Query: 39 RVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCV 98
R+E+L +L+ +VK + +E + + K++TFGSYRLGV +IDALCV
Sbjct: 274 RMEILPKLNTLVKH-------AQCFHLKEHVAKLGGKIYTFGSYRLGVNHKGANIDALCV 326
Query: 99 GPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVI 158
P R D +FG F +L++ P V + V +A VPV+K F+G+ +DLL+A+L I
Sbjct: 327 APRNIERLD-YFGSFFELLKKQPEVTECRAVEEALVPVVKMNFDGIKIDLLFARLALKEI 385
Query: 159 PEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYS 218
P + D D LL NLD + V SLNGCR TD IL LVPNI NFR LR ++ WAK+ GIYS
Sbjct: 386 PNNFDLGDDMLLKNLDPKLVRSLNGCRATDEILRLVPNIDNFRLALRSIKLWAKKHGIYS 445
Query: 219 NAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHH 278
N++G+ GG++W +LVAR CQL PN + V +FF +F WKWP PV L +
Sbjct: 446 NSLGYFGGVSWGMLVARTCQL-PNVVAATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQ 504
Query: 279 VWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTW 338
VWD R N +DR HLMPIITP+YP NS+++VSS+T ++M EF ++ +EI GK W
Sbjct: 505 VWDSRVNVQDRFHLMPIITPAYPQPNSTFHVSSSTRKVMLNEFNSGMQITDEIMLGKAGW 564
Query: 339 ITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIER 387
LFE FF ++ + + + + N D +W VES++R LI +ER
Sbjct: 565 DKLFEAPSFFFKYRYVIVLLVTSNNTDDHLEWCEMVESKIRYLIQNLER 613
>gi|310798369|gb|EFQ33262.1| hypothetical protein GLRG_08406 [Glomerella graminicola M1.001]
Length = 631
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/377 (39%), Positives = 228/377 (60%), Gaps = 4/377 (1%)
Query: 42 VLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPC 101
VL L I +++KRV + ++ I++A K+FT+GSYRLGV GP +DID L V P
Sbjct: 56 VLEHLARICDEFVKRVARKREEGNDALIRDARGKIFTYGSYRLGVYGPGSDIDTLVVAPK 115
Query: 102 YATRHDDF--FGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQL-QFSVI 158
Y TR D F F L + + + D+ V DA VP+IKF+F+G+S+DL+++++ +
Sbjct: 116 YVTRADYFEIFPDLLKEMAPPGAITDMAVVADAFVPIIKFEFSGISIDLIFSRIAMLKQL 175
Query: 159 PEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYS 218
P+D + LL LDE + SLNG RVTD ILSLVP F+ LR ++ WA+RR IY+
Sbjct: 176 PKDFNVQDSGLLRGLDEAELRSLNGTRVTDEILSLVPEQATFKLALRAIKLWAQRRAIYA 235
Query: 219 NAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHH 278
N MGF GG+ WA+LVARVCQLYP A +V+V++FF I W WP PV+L ++ +
Sbjct: 236 NIMGFPGGVAWAMLVARVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKHVEGGPLQVR 295
Query: 279 VWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTW 338
VW+P+ + D+ HLMP+ITP+YP ++YN++ + + ++Q+E QR ++ + I G+ W
Sbjct: 296 VWNPKLYKGDQFHLMPVITPAYPSMCATYNITRSAMTVIQQELQRGCDITDAIMLGRSPW 355
Query: 339 ITLFEPYHFFG-SFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRL 397
LF + FF +K Y+ + ++ + + W G+VES++R L+ +E+ L
Sbjct: 356 SDLFVKHTFFTQGYKYYISVITSSTDKEAHKVWSGYVESKVRVLVQGLEQHQSIALAHAF 415
Query: 398 YPGDFSENSVKSSSQCH 414
G + K+ + H
Sbjct: 416 NKGYERRHRCKNEEEVH 432
>gi|156037648|ref|XP_001586551.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980]
gi|154697946|gb|EDN97684.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 573
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 191/569 (33%), Positives = 290/569 (50%), Gaps = 73/569 (12%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+ST+ PT + +T L + L E F S ++ R VL L I ++++KRV + +
Sbjct: 15 LSTALPTDAEKQATDALIEELTRENNFESRADTDKRTAVLASLQNITEEFVKRVCRKQNL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
E I A ++FT+GS+RLGV GP +DID L V P +R + F F L +
Sbjct: 75 P-ENYINNAGGRIFTYGSFRLGVYGPGSDIDTLVVVPKNVSREEYFEMFPDLLVEMAPKG 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQ-FSVIPEDLDSLQDSLLHNLDEQTVLS 180
+EDLTPV +A VP+IKF+++G+S+DL++A++ + +P L D+LL LD+ + S
Sbjct: 134 AIEDLTPVQEAYVPIIKFEYSGISIDLIFARIDTLTQVPRTLTLKDDNLLTGLDDAGLRS 193
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
+NG RVTD I+ LVP FR+ LR ++ WA+RR IY+N MGF GG+ WA+LVARVCQLY
Sbjct: 194 VNGTRVTDDIMDLVPEKAVFRNALRGVKLWAQRRAIYANIMGFPGGVAWAMLVARVCQLY 253
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A + ++ +FF+I W+WP PV+L I+ + VW+PR + D HLMPIITPSY
Sbjct: 254 PQATASTIILKFFRIMEKWQWPQPVLLQQIKNGKLNVRVWNPRVYKSDSFHLMPIITPSY 313
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQIHI 359
P +++NV+ +T I+ E R + + I GK W LF+ + FF ++K YL +
Sbjct: 314 PSMCATHNVTKSTKEIICRELARGGNIVDRIMMGKAPWKDLFQKHTFFTKNYKYYLSVIS 373
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIE------------------------------RDM 389
A+ W G VES++R L+ +E ++
Sbjct: 374 ASTTKEAQLIWAGLVESKVRLLVTNLETHESIALAHPFNKGFERVHKCSSEDEIESVKEG 433
Query: 390 GGVLQCRLYP--------------------GDFSENSVKSSSQCHY----FMGLGRKQGV 425
G Q P GD E + Y ++GL ++G
Sbjct: 434 GHQYQIYEIPTVTTDPSHDPSLGIAVKDQNGDVPEPEPEKKETMVYTTTFYIGLELREG- 492
Query: 426 SPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQ----IHVSHLRCQDIPDFVFP-GGVRP 480
+ D+ V++FK SW++ + + V H R D+PD VF G V+P
Sbjct: 493 ----AKSLDLAWCVDDFKDRC----RSWEKYNEELNTLSVIHTRNCDLPDDVFTEGEVKP 544
Query: 481 PKSLNEKKRKRIEVIESTKLKKSESSTAG 509
+S +KKR + + K+ + AG
Sbjct: 545 TRSQKKKKRPASDDAKQAPAKRQQVVAAG 573
>gi|440634435|gb|ELR04354.1| hypothetical protein GMDG_06729 [Geomyces destructans 20631-21]
Length = 598
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 162/388 (41%), Positives = 240/388 (61%), Gaps = 7/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+ST+ PT + ++ L + L + + S ++ R E L L I +++IK+V+ +G+
Sbjct: 15 LSTALPTDSENQASSALIEELKRQNNYESVVDTQKRTEALKALQAITEEFIKQVSKAQGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
D A+ K+FT+GS+RLGV GP +DID L VGP + TR D F F L +
Sbjct: 75 PDS-VANSASGKIFTYGSFRLGVFGPGSDIDTLVVGPKHVTRDDFFKYFPDLLVTMSPPG 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQ-FSVIPEDLDSLQDS-LLHNLDEQTVL 179
+ DLTPV D+ VP+IKF++ G+S+DL+++++ + IP+ L +LQDS LL LDE +
Sbjct: 134 AITDLTPVVDSFVPIIKFEYAGISIDLIFSRIAVLNQIPQSL-TLQDSNLLRGLDEADLR 192
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
SLNG RVTD IL LVP FR+ LR ++ WA+RR IY+N +GF GG+ WA+LVARVCQL
Sbjct: 193 SLNGTRVTDAILDLVPQKTIFRTALRGIKLWAQRRAIYANIIGFPGGVAWAMLVARVCQL 252
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
YP A + +V +FF+I W+WP PV+L I + VW+PR + D HLMPIITP+
Sbjct: 253 YPKATSSTVVLKFFRIMEKWQWPTPVLLTHIASGPLQVKVWNPRIYKHDSFHLMPIITPA 312
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIH 358
YP +++N++ +T I+Q E +R + ++I +GK W LF + FF +K YL +
Sbjct: 313 YPSMCATHNITRSTKEIIQRELKRGGNITDQIMSGKLQWKDLFAKHTFFTEGYKYYLSVI 372
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIE 386
A+ W G VES++R L+ +E
Sbjct: 373 SASTTREAQNIWGGLVESKIRLLVLSLE 400
>gi|171686334|ref|XP_001908108.1| hypothetical protein [Podospora anserina S mat+]
gi|170943128|emb|CAP68781.1| unnamed protein product [Podospora anserina S mat+]
Length = 661
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 159/398 (39%), Positives = 239/398 (60%), Gaps = 10/398 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT + + L + L + F S E+ R +V+ +L+ I ++K+ T +
Sbjct: 12 ISTALPTEAEKRMHQALHEELRAQGTFESRAETEARKKVIAQLEKITTAFVKKATAE--T 69
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
+ ++EA ++FT+GSYRLGV GP +DID L V P + T F F L +
Sbjct: 70 QNSFMVREAIGRVFTYGSYRLGVYGPGSDIDTLVVAPKHVTTEQYFRLFPPLLVEMAPPG 129
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQ-FSVIPED--LDSLQDSLLHNLDEQTV 178
+ DLTPVPDA VP+IKF+F+G+S+DL++ ++ + IPED + ++LL L E V
Sbjct: 130 AITDLTPVPDAFVPIIKFEFSGISIDLIFCSIKGLTQIPEDKSWNLTDNTLLRGLSENEV 189
Query: 179 LSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQ 238
SLNG RVTD IL+LVP F+ LR ++ WA+R+ IY+N MGF GG+ WA+LVARVCQ
Sbjct: 190 RSLNGTRVTDEILNLVPEPATFKLALRAIKLWAQRKAIYANIMGFPGGVAWAMLVARVCQ 249
Query: 239 LYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQ--AMPHHVWDPRSNQRDRKHLMPII 296
LYP A V+V++FF I W WP PV+L I+Y VW+P+ DR H MPII
Sbjct: 250 LYPKATSAVVVNKFFHIMLKWPWPLPVLLKDIEYNISVTRAPVWNPKLYSSDRNHRMPII 309
Query: 297 TPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS-FKNYL 355
TP+YP +++N++ ++ ++ +E ++ ++ EEI G+ W LF + FF S F+ YL
Sbjct: 310 TPAYPAMCATHNINRSSKVVIMQELEKGVQVTEEIMTGRAPWKALFTKHTFFTSDFRYYL 369
Query: 356 QIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVL 393
+ +++ W G++ESR+R L++ IE VL
Sbjct: 370 TVISSSRTKDAQNVWSGFIESRVRVLVNKIENHAAIVL 407
>gi|398390670|ref|XP_003848795.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
gi|339468671|gb|EGP83771.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
Length = 559
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 155/388 (39%), Positives = 241/388 (62%), Gaps = 6/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST P D+ ++ L + L + F S +E+ R +VL RL ++ ++ V K +
Sbjct: 15 ISTDPPKPQDLALSESLMEELKAQNNFESPDETKKRGDVLARLQKLLHQLVQIVGKQKKL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE--TP 121
+E ++E+ K+FT+GSYRLGV GP +DID L V P + TR +DFF + +L++ TP
Sbjct: 75 PNE-ILKESGGKIFTYGSYRLGVYGPGSDIDTLMVAPRHVTR-EDFFEHMPTLLRQATTP 132
Query: 122 -LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+ +LTPVP VP+IK + GVS+DL+++ L + +P++L+ ++LL L E +
Sbjct: 133 DELTELTPVPGITVPIIKLELCGVSIDLIFSALDRASVPKNLELTDNNLLRGLTEVDLRC 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
+NG RVTDRIL LVP R FR LR ++ WA+RR IY N +GF GG+ +A++VAR+CQLY
Sbjct: 193 VNGTRVTDRILQLVPQTRVFRVALRAVKLWAQRRAIYGNVVGFPGGVAYAMMVARICQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A ++V +FF + ++W+WP + L + + WDP N+ D+ HLMP+ITP+Y
Sbjct: 253 PRAAAPMIVQKFFFVISNWQWPRAITLQTREKGPLAEKEWDPTLNRWDKMHLMPVITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHI 359
PC NS+ ++ +T ++ E +R ++ EEI GK+ W LF FF ++++Y+ +
Sbjct: 313 PCMNSTMSIMPSTKAVLLTELKRGHDIMEEIYGGKKQWKDLFVKQKFFSEAYQHYICVIT 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
A K + W G V+SRLR+LI IE+
Sbjct: 373 AGKTKEAQQAWSGLVQSRLRRLIQGIEQ 400
>gi|146180895|ref|XP_001021673.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|146144391|gb|EAS01427.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 1765
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 158/400 (39%), Positives = 241/400 (60%), Gaps = 22/400 (5%)
Query: 16 STKELEKILV----DEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQE 71
S K++++IL + K +EEE+ + E L +L I++DWI+ I++E Q
Sbjct: 1129 SEKQMQQILDVLEGEYKYSETEEETKQKDEKLKQLRQIIRDWIQ------AIAEENNHQL 1182
Query: 72 A-NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVP 130
+L FGSY+L V +DID +C+ P + R FFG L +LQ V +L P+
Sbjct: 1183 TFGGELLFFGSYKLKVNSHDSDIDTVCLVPNFVDRDQHFFGDLVNILQNRKEVTELFPIK 1242
Query: 131 DARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRI 190
+A VP+IK KF+G+ DL +A+ E++D + +L ++DE++ S NGCRV + +
Sbjct: 1243 EASVPIIKMKFSGILFDLSFARAPPQYNGENIDLTSNQMLLSMDERSYRSFNGCRVAEWL 1302
Query: 191 L--SLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVL 248
+ + N NF+ TL+C++ WA RGIYSN +G+L GI W +LVA++CQLYPN PN L
Sbjct: 1303 IRKDNIQNYENFKITLKCIKLWATNRGIYSNIIGYLSGIGWTILVAKICQLYPNYPPNQL 1362
Query: 249 VSRFFKIFAHWKWPN-PVMLCPIQYQAMPHHV----WDPRSNQRDRKHLMPIITPSYPCT 303
+ RFF +++HWKW + PV + IQ + W P RDR +M IITP +PC
Sbjct: 1363 IERFFFLYSHWKWHDLPVYVEHIQEDVANTKLNADQWRPEF--RDRNSMM-IITPCFPCM 1419
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
N+++NVS TTLRI+QE+ Q + +I+ ++T+ LF+P++FF +K++LQI+I A N
Sbjct: 1420 NTAHNVSPTTLRIIQEQLQYGNRIINKIKKNEKTFSDLFKPFNFFKRYKHFLQINIVATN 1479
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDM-GGVLQCRLYPGDF 402
D WKG VESRLR+L + E+ + ++Q YP F
Sbjct: 1480 KNDHIVWKGHVESRLRKLTKLFEQSIHNKLIQVHPYPNPF 1519
>gi|355709247|gb|AES03528.1| poly polymerase gamma [Mustela putorius furo]
Length = 603
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 183/493 (37%), Positives = 275/493 (55%), Gaps = 43/493 (8%)
Query: 123 VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLN 182
+ +L V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLN
Sbjct: 6 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 65
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
GCRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPN
Sbjct: 66 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 125
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
A + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 126 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 185
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK 362
NS+YNVS++T +M EEF++ + +EI GK W L EP +FF +++Y+ + +A
Sbjct: 186 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 245
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGL 419
+ +W G VES++R L+ +ER+ L + +PG+ E+ ++ +F+G+
Sbjct: 246 TEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYISMWFLGI 304
Query: 420 GRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPG 476
++ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 305 IFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL--- 360
Query: 477 GVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPS 536
P + +KK+K+ S +S + S LD S +G
Sbjct: 361 ----PAEILQKKKKQSLSDVSRSSSGPQSKRSSLDSN----------CLDSSRDTDNG-- 404
Query: 537 VEPSTSSVSSSTSASSRPQRPAVSIETEDDNAT----------SVSQAQNFN--QVGATV 584
P S V ST+ S+P P S ETE NA SV AQ + +GA V
Sbjct: 405 -TPFNSPV--STNKPSKPDVPP-SGETERSNAEPAAVIVEKPLSVPPAQGLSIPVIGAKV 460
Query: 585 AAALATGTISSFC 597
+A+ + + C
Sbjct: 461 DSAVKAVSPPAVC 473
>gi|397635329|gb|EJK71816.1| hypothetical protein THAOC_06705 [Thalassiosira oceanica]
Length = 629
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 189/502 (37%), Positives = 265/502 (52%), Gaps = 56/502 (11%)
Query: 17 TKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDW---IKRVTMDKGISDEEQIQEAN 73
+ L + L SE+ + R + + +L +++DW + + K + E
Sbjct: 91 SSSLLDVCTARNLIESEDGTARRKKAMRKLQRMLQDWSGSLVKGKKAKKARAKAAGAETP 150
Query: 74 AKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDAR 133
L +FGSYRLGV P D+D L + P +ATR DDFFG R+L++ VEDL PV A
Sbjct: 151 PILLSFGSYRLGVHTPDADVDCLVLAPRHATR-DDFFGSWVRILKQKKGVEDLHPVSSAY 209
Query: 134 VPVIKFKFNGVSVDLLYAQLQFSVI--------------PEDLDS-----LQDSLLHNLD 174
PVIKF +GV +DL++A + V ED S + DSLL LD
Sbjct: 210 TPVIKFVMDGVKIDLIFASISNEVWLREHAQCVKSGDGGAEDGGSEREVDVDDSLLVGLD 269
Query: 175 EQTVLSLNGCRVTDRILSLVPNIR---NFRSTLRCLRFWAKRRGIYSNAMGFLGGINWAL 231
E +V S+NG RV +LS + + R N+R TLR ++ WA+ +G+YSN +G+LGG+NWA+
Sbjct: 270 EASVRSVNGVRVAQYLLSTMSSPRQLENYRLTLRAVKEWARVQGMYSNVLGYLGGVNWAI 329
Query: 232 LVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMP------HHVWDPRSN 285
LV VC +P+A L+ FF+ FA+W WP+PVML P + +P VWDPR N
Sbjct: 330 LVCFVCIRHPDASSARLLHLFFETFANWNWPDPVMLTPEASRHVPPRNVDARPVWDPREN 389
Query: 286 QRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEI-------EAGKRTW 338
RD+ H+MPIITP YP NSS+NV LR M++EF+RA + EI E GK+ W
Sbjct: 390 YRDKLHVMPIITPCYPSMNSSFNVGEPGLRRMRDEFRRAARVSREILSGTATGEDGKKGW 449
Query: 339 ITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLY 398
+LFE FFG YL++ +AA +F +W G E+R+R LI +E D + R Y
Sbjct: 450 SSLFERSGFFGQHGAYLRVDVAATTEDEFLRWFGLCEARMRLLIAGLESD-----EIRAY 504
Query: 399 P-GDFSENSVKSSSQCHYFMGLGRKQGVSPQD---GEKFDMRLTVEEFKSHVVWMYSSWK 454
P F K +F+ L GV +D GE+ L HVV +
Sbjct: 505 PFARFYRRDTKEEYVSSFFVALRFASGVD-RDVRWGERVSEYL-------HVVNSFEGRT 556
Query: 455 QGMQIHVSHLRCQDIPDFVFPG 476
GM + + L+ D+P FVF G
Sbjct: 557 AGMDLRLELLKRADLPRFVFDG 578
>gi|83285836|ref|XP_729897.1| poly(A) polymerase III [Plasmodium yoelii yoelii 17XNL]
gi|23489018|gb|EAA21462.1| poly(A) polymerase III [Plasmodium yoelii yoelii]
Length = 613
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 172/519 (33%), Positives = 284/519 (54%), Gaps = 55/519 (10%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S PT D+ ++ ++L LF +E+ R +VLG ++ + +++ +++++GI
Sbjct: 87 VSLDYPTEEDLKKGNDVVELLKSYNLFETEQALKKREKVLGMINKLFHEFVIELSINQGI 146
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+EE+ +E L+TFGSYRLGV P++DID + + P TR + FF + + LQ+ V
Sbjct: 147 -NEEEAKEIYGNLYTFGSYRLGVITPNSDIDCIFLAPQNITR-EIFFNEFYLKLQQDRNV 204
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSL-QDSLLHNLDEQTVLSLN 182
+ L +P+ P+I+F ++ V +DLL A L + + + +L D +L NLDE TV SLN
Sbjct: 205 KKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCCYTLDNDYILKNLDEVTVRSLN 264
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
G RV D IL+ VPN NFR+TLR ++ WAKRRGIYSN +GFLGGI+WALL A++CQ+YPN
Sbjct: 265 GIRVADLILNSVPNKDNFRNTLRFIKLWAKRRGIYSNILGFLGGISWALLTAKICQIYPN 324
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMP----HHVWDPRSNQRDRKHLMPIITP 298
+ L+ +FF++++ W W PV++ I+ + +WDP N +D+ H+MPIITP
Sbjct: 325 YNISQLICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEKNVKDKLHIMPIITP 384
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEA------------------------- 333
++PC NS++NV+ T I+ EEF+RA + +++
Sbjct: 385 AFPCMNSTHNVTYCTRSILIEEFKRAHSIINYMDSNPDADISQVMEHVNNLMSHGNAINI 444
Query: 334 ---GK--------------RTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVES 376
GK W + EP+ F ++K++L I I N + WKGW+ES
Sbjct: 445 NNVGKSGDNENVNIHNNNSSIWSCIIEPFDLFKTYKHFLHIQIMGTNELIYNLWKGWIES 504
Query: 377 RLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMR 436
++R L +E L+ R +P ++ K +F+ L +P D F++
Sbjct: 505 KIRLLFKKLE--TINELKIRPFPKFYTYKKDKFYYCSSFFIALIFFFK-NPYDN-TFNLS 560
Query: 437 LTVEEFKSHVV-W-MYSSWKQGMQIHVSHLRCQDIPDFV 473
+ +F V+ W + + +I++S+ + + DF+
Sbjct: 561 YAIRDFIDIVLNWPQKNKYTNSFKINISYQKVSQVLDFL 599
>gi|330915746|ref|XP_003297151.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
gi|311330327|gb|EFQ94750.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
Length = 566
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 178/511 (34%), Positives = 266/511 (52%), Gaps = 39/511 (7%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT D+ L L DE +F + E + R VL + +V+++++RV KG+
Sbjct: 17 ISEAPPTEQDIRKNDSLITTLKDENVFETPEGNQQRESVLKDIQNVVEEFVRRVGRKKGV 76
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKL---FRMLQET 120
+ I A K+FTFGS+ LGV GPS+DID L V P + + DDFF FR L +
Sbjct: 77 Q-QPIIDAAGGKIFTFGSFALGVHGPSSDIDTLVVAPKFVS-IDDFFALFPPTFRELCDE 134
Query: 121 PLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDLDSLQDSLLHNLDEQTVL 179
+++ PV DA VP+IK ++ GVS+DLL+ L + IP + ++ L L E
Sbjct: 135 KDIQEFVPVEDAFVPIIKMQYQGVSIDLLFCSLPKRPSIPSKMTTIDKKDLEGLSESATR 194
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
S+NG RVT+ +L VP +FR LR ++ W+ RRGIY G+ GG+ WA++VAR+CQL
Sbjct: 195 SVNGTRVTNELLDSVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAIMVARICQL 254
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
YP A +VS+FF + W WP PVML I+ M VW+P+ DR HLMPIITP+
Sbjct: 255 YPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDRAHLMPIITPA 314
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQIH 358
+P +++ V +TLRIM+EEF RA ++ ++I A K+ W LFE + FF K YL +
Sbjct: 315 FPSMCATHTVMPSTLRIMKEEFGRADKILQDIFANKKDWKALFERHTFFTKDHKYYLSVV 374
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---------------- 402
A++ + G V+S++R +I I+ G+ R Y F
Sbjct: 375 AASRTKEANSTFSGLVQSKIRHIIKGIDDGNTGIATARPYIEYFERAHRITDDQFKEVAQ 434
Query: 403 -------------SENSVKSSSQCHYFMGLGRKQGVSPQDGE---KFDMRLTVEEFKSHV 446
+E +++++ G++ GE D+ V +FKS++
Sbjct: 435 GSLDYHIPKSEMDAEGALEANGDTTVVYTTTFYIGLTLPTGEATKSLDISYPVSQFKSYI 494
Query: 447 VWMYSSWKQGMQIHVSHLRCQDIPDFVFPGG 477
+ M + V H R +PD VF G
Sbjct: 495 TDSDLFNEDLMSVKVVHTRSSALPDDVFVEG 525
>gi|452002314|gb|EMD94772.1| hypothetical protein COCHEDRAFT_1167952 [Cochliobolus
heterostrophus C5]
Length = 578
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 178/512 (34%), Positives = 267/512 (52%), Gaps = 37/512 (7%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +APT D+ +L + L E +F + E + R EV+ + +V+++I+RV KG+
Sbjct: 17 ISEAAPTEHDIKLNDKLIETLKAENVFETPEGNRRREEVIEHIQKVVEEFIRRVGKQKGV 76
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLF--RMLQETP 121
+ I A K+FTFGSY LGV GPS+DID L V P + H+ F R +
Sbjct: 77 Q-QSVIDAAGGKIFTFGSYALGVHGPSSDIDTLVVAPKFVAIHEFFEFFPPTFREMSNVD 135
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+ + PV DA VP+IK ++ VS+DLL+A L + S IP ++D+++ L L E S
Sbjct: 136 DINEFVPVEDAFVPIIKMEYREVSIDLLFASLPKRSSIPRNMDTIEKKDLEGLSESATRS 195
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
+NG RVT+ +L VP +FR LR ++ W+ RRGIY G+ GG+ WA++VAR+CQLY
Sbjct: 196 VNGTRVTNELLDAVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAIMVARICQLY 255
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +VS+FF + W WP PVML I+ + VW+P+ DR HLMPIITP++
Sbjct: 256 PMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYGGDRAHLMPIITPAF 315
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQIHI 359
P +++ V +TLRIM++EF RA ++ + I AG + W LFE + FF K YL +
Sbjct: 316 PSMCATHTVMPSTLRIMKDEFGRADKILQHIFAGTKDWNALFERHSFFTKDHKYYLSVVA 375
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCH----- 414
A++ + G V+S++R ++ I+ G+ R Y F Q H
Sbjct: 376 ASRTKEANSTFSGLVQSKIRHIVKGIDDGQTGIDTARPYINYFERYHRCKDDQFHEVTQG 435
Query: 415 ---YFMGLGR--KQGVSPQDGE---------------------KFDMRLTVEEFKSHVVW 448
Y + G +P D + D+ V +F+S++
Sbjct: 436 SLEYMIPASEVPADGTAPADDDTHIIYTTTFYIGLTLPPDATKSLDISYPVSQFRSYITD 495
Query: 449 MYSSWKQGMQIHVSHLRCQDIPDFVF-PGGVR 479
++ M + V H R +PD VF PG R
Sbjct: 496 SDLYDEKLMSVKVVHTRNTALPDDVFLPGETR 527
>gi|189208746|ref|XP_001940706.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187976799|gb|EDU43425.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 579
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 177/514 (34%), Positives = 267/514 (51%), Gaps = 45/514 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT D+ L L DE +F + E + R VL + +V+++++RV KG+
Sbjct: 17 ISEAPPTEQDIRKNDSLITTLKDENVFETPEGNQQRESVLKDIQNVVEEFVRRVGKKKGV 76
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFG---KLFRMLQET 120
+ I A K+FTFGS+ LGV GP +DID L V P + + DDFF F+ L
Sbjct: 77 Q-QSIIDAAGGKIFTFGSFALGVHGPKSDIDTLVVAPKFVSI-DDFFAIFPSTFKELCNE 134
Query: 121 PLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDLDSLQDSLLHNLDEQTVL 179
+++ PV DA VP+IK ++ GVS+DLL+ L + IP ++ +++ L L E
Sbjct: 135 KDIQEFVPVEDAFVPIIKMEYQGVSIDLLFCSLPKRPSIPLNMTTIEKKDLEGLSESATR 194
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
S+NG RVT+ +L VP +FR LR ++ W+ RRGIY G+ GG+ WA++VAR+CQL
Sbjct: 195 SVNGTRVTNELLDSVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAIMVARICQL 254
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
YP A +VS+FF + W WP PVML I+ M VW+P+ DR HLMPIITP+
Sbjct: 255 YPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDRAHLMPIITPA 314
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQIH 358
+P +++ V +TLRIM+EEF RA + ++I A K+ W LFE + FF K YL +
Sbjct: 315 FPSMCATHTVMPSTLRIMKEEFGRADSILQDIFANKKDWKALFERHTFFTKDHKYYLSVV 374
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF------SENSVKSSSQ 412
A++ + G V+S++R +I I+ G+ R Y F +++ K +Q
Sbjct: 375 AASRTKEANSTFSGLVQSKIRHIIKGIDDGNTGIATARPYIEYFERAHRITDDQFKEVAQ 434
Query: 413 -----------------------------CHYFMGLGRKQGVSPQDGEKFDMRLTVEEFK 443
+++GL G + + D+ V +FK
Sbjct: 435 GSLDYLIPKSEADAEGTLEANGDTTIVHTTTFYIGLTLPTG---EATKSLDISYPVSQFK 491
Query: 444 SHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGG 477
S++ + M + V H R +PD VF G
Sbjct: 492 SYITDSDLYNEDLMSVKVVHTRSSALPDDVFVEG 525
>gi|452845518|gb|EME47451.1| hypothetical protein DOTSEDRAFT_69399 [Dothistroma septosporum
NZE10]
Length = 610
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 154/388 (39%), Positives = 239/388 (61%), Gaps = 7/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+ST +PT D+ + +L L + F E + R EVL +L+G++K+ +++V KG+
Sbjct: 14 LSTDSPTERDLKLSADLMTELKAQNNFEPPEATQKREEVLVKLEGLLKELVRKVGKSKGL 73
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
EE +Q+A K+FT+GSYRL V GP +DIDAL + P + TR +DFF + M++++
Sbjct: 74 P-EEILQQAGGKIFTYGSYRLKVFGPGSDIDALMIAPRHVTR-EDFFKYMPDMIRQSTPT 131
Query: 124 EDLT---PVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
E LT PV A VP+IK + +GV+VDL+++ L + +P+DL +LL L E +
Sbjct: 132 EQLTELVPVEAANVPIIKTEIDGVAVDLIFSTLHMASVPKDLQLKDSNLLRGLSETDLRC 191
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
+NG RVTDR+L LVP + FR LR ++ WA RRG+Y N GF GG+ +A++V R+CQLY
Sbjct: 192 VNGTRVTDRLLQLVPETKTFRLALRAIKLWASRRGVYGNVYGFPGGVGYAMMVVRMCQLY 251
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQ-YQAMPHHVWDPRSNQRDRKHLMPIITPS 299
P A V+V++FF + W+WP+PV LC + + H+V N ++ MPIITP
Sbjct: 252 PRAAAPVIVNKFFMVMGKWRWPDPVTLCKREPAPDLGHYVAQWPENPWEKADKMPIITPV 311
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIH 358
+PC N++ ++++ L ++ EFQRA ++ +I GK+ W LF FF +K+YL +
Sbjct: 312 FPCMNATGGLTASNLEVILREFQRALKITNDIHNGKQEWQALFARQTFFTEDYKHYLCLV 371
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIE 386
++ + W G+V SRLR+L+ IE
Sbjct: 372 TGSRTKEAQQAWSGFVSSRLRKLVSSIE 399
>gi|68070217|ref|XP_677020.1| poly(A) polymerase PAP [Plasmodium berghei strain ANKA]
gi|56496967|emb|CAH94131.1| poly(A) polymerase PAP, putative [Plasmodium berghei]
Length = 626
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 172/519 (33%), Positives = 283/519 (54%), Gaps = 55/519 (10%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S PT D+ ++ ++L LF +E+ R +VLG ++ + +++ +++++GI
Sbjct: 87 VSLDYPTEEDLKKGNDVVELLKSYNLFETEQALKKREKVLGMINKLFHEFVIELSINQGI 146
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
++EE +E L+TFGSYRLGV P++DID + + P TR + FF + + LQ+ V
Sbjct: 147 NEEEA-KEIYGNLYTFGSYRLGVITPNSDIDCIFLAPQNITR-EIFFNEFYLKLQKDRNV 204
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSL-QDSLLHNLDEQTVLSLN 182
+ L +P+ P+I+F ++ V +DLL A L + + + +L D +L NLDE TV SLN
Sbjct: 205 KKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCRYTLDNDYILKNLDEVTVRSLN 264
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
G RV D IL+ VPN NFR+TLR ++ WAKRRGIYSN +GFLGGI+WALL A++CQ+YPN
Sbjct: 265 GIRVADLILNSVPNKDNFRNTLRFIKLWAKRRGIYSNILGFLGGISWALLTAKICQIYPN 324
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMP----HHVWDPRSNQRDRKHLMPIITP 298
+ L+ +FF++++ W W PV++ I+ + +WDP N +D+ H+MPIITP
Sbjct: 325 YNISQLICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEKNVKDKLHIMPIITP 384
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIE-------------------------- 332
++PC NS++NV+ T I+ EEF+RA + ++
Sbjct: 385 AFPCMNSTHNVTYCTRSILIEEFKRAHSIINYMDLNPDADIGQVMEHVNNLMSYGNAINI 444
Query: 333 --AGK--------------RTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVES 376
GK W + EP+ F ++K++L I I N + WKGW+ES
Sbjct: 445 NNVGKSGDNENVNIHNNSSSIWSCIIEPFDLFKTYKHFLHIQIMGTNELIYNLWKGWIES 504
Query: 377 RLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMR 436
++R L +E L+ R +P ++ K +F+ L +P D F++
Sbjct: 505 KIRLLFKKLE--TINELKIRPFPKFYTYKKDKFYYCSSFFIALIFFFK-NPYDN-TFNLS 560
Query: 437 LTVEEFKSHVV-W-MYSSWKQGMQIHVSHLRCQDIPDFV 473
+ +F V+ W + + +I++S+ + + DF+
Sbjct: 561 YAIRDFIDIVLNWPQKNKYINSFKINISYQKVSQVLDFL 599
>gi|296820828|ref|XP_002849998.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
gi|238837552|gb|EEQ27214.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
Length = 593
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 158/404 (39%), Positives = 233/404 (57%), Gaps = 21/404 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S++ PT ++ L L + F + E+ R + L L + ++IK V+ +KG+
Sbjct: 15 LSSALPTPSELAENDALIAELKLQNNFEAPSETEKRKQTLHLLQRVTIEFIKVVSKEKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPS-----------------TDIDALCVGPCYATRH 106
S + I + K+FT+GSYRLGV GP+ +DID L V P + R
Sbjct: 75 S-QAAIDVSGGKIFTYGSYRLGVYGPAVMNGDISLMYSLRQFAGSDIDTLVVAPKHVMRE 133
Query: 107 DDF--FGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDS 164
D F F + +E +TPVPDA VP+IK + +G+S+DL++A+L +P +LD
Sbjct: 134 DFFAHFPTVLEKFAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVPSVPPNLDL 193
Query: 165 LQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFL 224
LL LDE+ + +NG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF
Sbjct: 194 KNKDLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFP 253
Query: 225 GGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRS 284
GG+ WA+LVARVCQLYP A +V+V +FF+I W WP PV+L I+ + VW+P+
Sbjct: 254 GGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKI 313
Query: 285 NQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEP 344
DR HLMPIITP+YP +++N+S +T ++ E +R ++ + I G+R W LF
Sbjct: 314 YHGDRFHLMPIITPAYPSMCATHNISMSTKAVILRELRRGGDMVDNIFVGQRRWSDLFAR 373
Query: 345 YHFF-GSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIER 387
+ FF G +K YL I+ + W G VES+LR L+ ++R
Sbjct: 374 HSFFSGDYKYYLSINSTSTTKEAQAIWSGLVESKLRHLVGALDR 417
>gi|451845399|gb|EMD58712.1| hypothetical protein COCSADRAFT_265597 [Cochliobolus sativus
ND90Pr]
Length = 571
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 177/516 (34%), Positives = 268/516 (51%), Gaps = 45/516 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +APT D+ +L + L E +F + E + R EV+ + +V+++I+RV KG+
Sbjct: 17 ISEAAPTEHDIKLNDKLIETLKAENVFETPEGNRRREEVIEHIQKVVEEFIRRVGKQKGV 76
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLF--RMLQETP 121
+ I A K+FTFGSY LGV GPS+DID L V P + H+ F R +
Sbjct: 77 Q-QSVIDAAGGKIFTFGSYALGVHGPSSDIDTLVVAPKFVAIHEFFEFFPPTFREMSNVD 135
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+ + PV DA VP+IK ++ VS+DLL+A L + S IP ++D+++ L L E S
Sbjct: 136 DINEFVPVEDAFVPIIKMEYREVSIDLLFASLPKRSSIPRNMDTIEKKDLEGLSESATRS 195
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
+NG RVT+ +L VP +FR LR ++ W+ RRGIY G+ GG+ WA++VAR+CQLY
Sbjct: 196 VNGTRVTNELLDAVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAIMVARICQLY 255
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +VS+FF + W WP PVML I+ + VW+P+ DR HLMPIITP++
Sbjct: 256 PMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYGGDRAHLMPIITPAF 315
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQIHI 359
P +++ V +TLRIM++EF RA ++ + I AG + W LFE + FF K YL +
Sbjct: 316 PSMCATHTVMPSTLRIMKDEFGRADKILQHIFAGTKDWNALFERHSFFTKDHKYYLSVVA 375
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCH----- 414
A++ + G V+S++R ++ I+ G+ R Y F Q H
Sbjct: 376 ASRTKEANSTFSGLVQSKIRHIVKGIDDGQTGIDTARPYINYFERYHRCKDDQFHEVTQG 435
Query: 415 ------------------------------YFMGLGRKQGVSPQDGEKFDMRLTVEEFKS 444
+++GL + P + D+ V +F+S
Sbjct: 436 SLEYMIPASEVPADGTAPADDDTHIIYTTTFYIGL----TLPPDATKSLDISYPVSQFRS 491
Query: 445 HVVWMYSSWKQGMQIHVSHLRCQDIPDFVF-PGGVR 479
++ ++ M + V H R +PD VF PG R
Sbjct: 492 YITDSDLYDEKLMSVKVVHTRNTALPDDVFLPGETR 527
>gi|156101143|ref|XP_001616265.1| poly(A) polymerase PAP [Plasmodium vivax Sal-1]
gi|148805139|gb|EDL46538.1| poly(A) polymerase PAP, putative [Plasmodium vivax]
Length = 649
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 254/459 (55%), Gaps = 47/459 (10%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
I+ + PT D+ ++ ++L LF +E+ R VLG ++ + +++ +++ +GI
Sbjct: 99 ITLNYPTEEDLKKANDVVELLKSYNLFETEQALKKRERVLGMINKLFHEFVVEISISQGI 158
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+EE + + L+TFGSYRLGV P++DID + + P TR + FF + + LQ+ V
Sbjct: 159 -NEEDAKHIHGNLYTFGSYRLGVITPNSDIDCIFLAPQNITR-EIFFNEFYLKLQQDRNV 216
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSL-QDSLLHNLDEQTVLSLN 182
L +P+ P+I+F ++ V +DLL A L + + + SL D +L NLDE TV SLN
Sbjct: 217 RKLQSLPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDEVTVRSLN 276
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
G RV D IL+ VP+ +FR+TLR ++ WAK RGIYSN +GFLGGI+WALL A++CQLYPN
Sbjct: 277 GIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAKICQLYPN 336
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPI-QYQAMP----HHVWDPRSNQRDRKHLMPIIT 297
+ L+ +FF++++ W W PV++ I +Y + VWDP N +D+ H+MPIIT
Sbjct: 337 YNVSQLIGKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPEKNIKDKLHVMPIIT 396
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAG----------------------- 334
P++PC NS++NV+ T I+ +EF+RA + +EA
Sbjct: 397 PAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEANPGANVTFVMNQANGIVTPVSAPT 456
Query: 335 --------------KRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQ 380
W + +P F S+K++L I I A N + WKGW+ES++R
Sbjct: 457 TSSSTTGSGSIPGSGSMWTNILQPLDLFASYKHFLHIQIMATNELIYNSWKGWIESKIRL 516
Query: 381 LIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGL 419
L +E L+ R YP + K +F+GL
Sbjct: 517 LFKKLE--TINELKIRPYPKFYVYKKDKFYYCSSFFIGL 553
>gi|429961574|gb|ELA41119.1| hypothetical protein VICG_01818 [Vittaforma corneae ATCC 50505]
Length = 501
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 149/393 (37%), Positives = 234/393 (59%), Gaps = 12/393 (3%)
Query: 19 ELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFT 78
+++K L + F SE+ R VLGRLD +VK ++++ + E + + K+FT
Sbjct: 29 QMDKYLRESNFFESEDAGQTRERVLGRLDFLVKKFVEKT------APEGEQKNYGGKIFT 82
Query: 79 FGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIK 138
FGSYRLGV DID LCV P + +R D FF + L + V++++ + DA VP+I
Sbjct: 83 FGSYRLGVHDRGADIDVLCVVPRHVSRKD-FFTIFYEELGQDENVKEISKIEDAYVPIIS 141
Query: 139 FKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIR 198
++G+ +DL +A+L VI E++ L D++L ++DE+ +LSLNG RVTD IL L+P +
Sbjct: 142 LTYDGIPIDLTFARLNLPVIAENISLLNDTILRSMDEKCILSLNGSRVTDAILRLIPRVD 201
Query: 199 NFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAH 258
F S LR ++FWAKRR IY NA G+ GG+ +++ VAR+CQ+YPN +V +FF+ ++
Sbjct: 202 VFHSALRAIKFWAKRRYIYGNAYGYFGGVTFSICVARICQMYPNLCAYDIVCKFFETYSS 261
Query: 259 WKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQ 318
WKWP PV LC I VWDP+ D+ H MP+ITP YP NS++NV+ +T ++
Sbjct: 262 WKWPTPVQLCSIVDHNYNLKVWDPKVYPADKYHKMPVITPVYPSINSTHNVTQSTFILIC 321
Query: 319 EEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRL 378
E R EL K + LFE FF K ++++ I +++ F W+G+++S++
Sbjct: 322 SELARGNELMR----SKAPFSKLFEVSGFFKKHKMFIEVRINSEDLQAFNIWEGYIQSKI 377
Query: 379 RQLIHMIERDMGGVLQCRLYPGDFSENSVKSSS 411
R L +E ++ + +P F+ S K+S+
Sbjct: 378 RILCTKLE-NLENISLAAPFPKAFTGRSCKASN 409
>gi|378730028|gb|EHY56487.1| poly(A) polymerase [Exophiala dermatitidis NIH/UT8656]
Length = 611
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 154/392 (39%), Positives = 234/392 (59%), Gaps = 10/392 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ P LD T EL + L E + +E+ R+ L L+ + +++++ V+ + +
Sbjct: 18 ISTALPEPLDNEKTAELIEELKRENNYEPMDETKKRMSTLALLNRVTQEFVREVSRRQRL 77
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHD--DFFGKLFRMLQETP 121
QI + K++ +GSYRLGV GP +DID L V P + TR D ++F + +
Sbjct: 78 P-PSQIDQFGGKIYPYGSYRLGVFGPGSDIDTLAVAPRHVTREDFFEYFPAVLERMAGPG 136
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDLDSLQDSLLHNLDEQTVLS 180
V LT VPD+ VP+IK NG+ +DL++A + IP+DL ++LL LD+ TV +
Sbjct: 137 AVTSLTAVPDSFVPIIKLVLNGIEIDLIFASIASLQTIPKDLTLNDNNLLMGLDQPTVRA 196
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
+ G RVTD ILSLVP + FR+ LR ++ WA+RR IY+N +G+ GG+ WA+LVARVCQLY
Sbjct: 197 VTGPRVTDEILSLVPEHKTFRTALRAIKLWAQRRAIYANIVGYPGGVAWAMLVARVCQLY 256
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPH-----HVWDPRSNQRDRKHLMPI 295
P+A+ +V +FF + +HW WP PVML I+ VW+P DRK++MPI
Sbjct: 257 PHAVGATIVDKFFFVISHWDWPTPVMLKDIEQLKNADLNKGFRVWNPAIYPGDRKNIMPI 316
Query: 296 ITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNY 354
ITP++P ++YN+S + +++ E +R E+ +I AGK W LF+ + FF K Y
Sbjct: 317 ITPAFPSMCATYNISKSGKKVILNELKRGGEITNKIFAGKAKWSDLFKKHTFFTADHKYY 376
Query: 355 LQIHIAAKNAGDFRQWKGWVESRLRQLIHMIE 386
L I ++ NA + W G VES++R + +E
Sbjct: 377 LSITASSLNADSAKAWAGLVESKVRIFVMQLE 408
>gi|348529712|ref|XP_003452357.1| PREDICTED: poly(A) polymerase gamma-like [Oreochromis niloticus]
Length = 763
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 192/539 (35%), Positives = 279/539 (51%), Gaps = 72/539 (13%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D TK+L + +F EEE R+ VLG+L+ VK+WI ++ K +
Sbjct: 24 ISLAPPREIDHHYTKKLCDAMKPFGVFEDEEELNHRLAVLGKLNNFVKEWIAEISELKNL 83
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
I K+FTFGSYRLGV DIDALCV P + R DFF F L++ +
Sbjct: 84 P-PSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-TDFFQSFFEKLKQHEEI 141
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V DA VPVIKFKF+G+ +DLL+A+L IP++LD DS+L NLD + + SLNG
Sbjct: 142 KDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSILRNLDIRCIRSLNG 201
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPN NFR TLR ++ WAKRRGIYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 202 CRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNA 261
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV +FF +F+ W+WPNPV+L + + VWDPR + ITP +
Sbjct: 262 VAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVS----------ITPVF--- 308
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
L ++ A EE N+L+
Sbjct: 309 --------YLLMVLHYIVLTASASTEE----------------------NHLE------- 331
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLG 420
W G VES++R L+ +ER+ L + +PG EN ++ +F+G+
Sbjct: 332 ------WIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGS-KENRNENDFVSMWFIGII 384
Query: 421 RKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGG 477
K+ V + D+ ++ F V ++ K+GM+I +H++ + + ++
Sbjct: 385 FKK-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHQYL---- 439
Query: 478 VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPS 536
PP+ + +KKR E+ S+ S+ + +S S T+SG + S P+
Sbjct: 440 --PPEVVQKKKRSIAELNRSSNGGSSKRFSLDNSHLDSSRDTDSGTPFNSPPSKTSKPA 496
>gi|169598326|ref|XP_001792586.1| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
gi|160704377|gb|EAT90176.2| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
Length = 575
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 176/511 (34%), Positives = 276/511 (54%), Gaps = 35/511 (6%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT D L + L +F + E + R EVL + +V+++++R KGI
Sbjct: 15 ISEAPPTEADNKLNDNLIETLTRLNVFETLEGNKRREEVLAHVQKVVEEFVRRAGKLKGI 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
+ + + A K+F FGSY LGV GP++DID L V P + D F F +FR L
Sbjct: 75 A-QSTLDVAGGKIFFFGSYALGVHGPTSDIDTLIVVPKHVFIEDFFKIFPSIFRELSNAE 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+ +L PV DA VP+IK ++ GVS+DLL+A + S +P++L+++ S+L +L+E T+ S
Sbjct: 134 DISELVPVEDAYVPIIKMEYRGVSLDLLFASMPTMSSVPKELETVDKSVLRHLEETTIRS 193
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
+NG RV +LS VP R+FR LR ++ WA RR IY G+ GGI WA++VAR+CQLY
Sbjct: 194 VNGTRVVKELLSSVPQRRHFRYALRAVKLWANRRAIYGAVFGYPGGIAWAIMVARICQLY 253
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDP--RSNQRDRKHLMPIITP 298
P A ++S+FF + W+WP PVML + VW+P +S D +HLMP+ITP
Sbjct: 254 PMACGATILSKFFNLMHKWQWPRPVMLKEHELPEFGLRVWNPAHQSYPPDARHLMPVITP 313
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQI 357
++P S++ V+++T +IM EEFQRA ++ ++ G+ TW LF + FF K YL +
Sbjct: 314 AFPAMCSTHTVTTSTKQIMMEEFQRADKIVRDVFNGQGTWEALFNNHSFFTQDHKYYLSV 373
Query: 358 HIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF-------SENSVKS- 409
A++ + G V+S++R L+ I+ G+ R +P F +E+ V++
Sbjct: 374 IAASRTKEADLTFHGLVQSKVRLLVAGIDDGQTGIDMARPFPEGFERVHRCKNEDEVEAV 433
Query: 410 ------------------SSQCHYFMGLGRKQGVS-PQDGEKFDMRLTVEEFKSHVVWMY 450
+++ H + G+ P++ D+ F+S +
Sbjct: 434 TKGSLDYMIPVSQVPAAGTTEDHIIYTMTFYIGLRLPKERSTLDISYITNHFRSKITESK 493
Query: 451 SSWKQGMQIHVSHLRCQDIPDFVF-PGGVRP 480
+ M + V H R +PD +F PG VRP
Sbjct: 494 LYDEGTMSVKVVHTRNTALPDDLFKPGEVRP 524
>gi|221057822|ref|XP_002261419.1| putative poly(a) polymerase pap (poly(a) polymerase pap [Plasmodium
knowlesi strain H]
gi|194247424|emb|CAQ40824.1| putative poly(a) polymerase pap (poly(a) polymerase pap, putative
[Plasmodium knowlesi strain H]
Length = 637
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 161/452 (35%), Positives = 252/452 (55%), Gaps = 40/452 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT D+ ++ ++L L+ +E R VLG ++ + +++ +++ +GI
Sbjct: 96 ISLNYPTEEDLRKGNDVVELLKSYNLYETEHALKKRERVLGMINKLFHEFVVEISISQGI 155
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+EE + + L+TFGSYRLGV P++DID + + P TR + FF + + LQ+ V
Sbjct: 156 -NEEDAKHIHGNLYTFGSYRLGVITPNSDIDCIFLAPQNITR-EIFFNEFYLKLQQDKNV 213
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSL-QDSLLHNLDEQTVLSLN 182
L +P+ P+I+F ++ V +DLL A L + + + SL D +L NLDE TV SLN
Sbjct: 214 RKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDEVTVRSLN 273
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
G RV D IL+ VP+ +FR+TLR ++ WAK RGIYSN +GFLGGI+WALL A++CQLYPN
Sbjct: 274 GIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAKICQLYPN 333
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPI-QYQAMP----HHVWDPRSNQRDRKHLMPIIT 297
+ L+ +FF++++ W W PV++ I +Y + VWDP N +D+ H+MPIIT
Sbjct: 334 YNVSQLICKFFRVYSIWNWKYPVLIQNINKYNNVDGLRNFSVWDPEKNIKDKLHVMPIIT 393
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAG----------------------- 334
P++PC NS++NV+ T I+ +EF+RA + +E
Sbjct: 394 PAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVMNQANGVVTPVSAPS 453
Query: 335 -------KRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIER 387
W + +P FG++K++L I I A + + WKGW+ES++R L +E
Sbjct: 454 SSTTSSSSNIWTNILQPLDLFGTYKHFLHIQIMATSELIYNSWKGWIESKIRLLFKKLE- 512
Query: 388 DMGGVLQCRLYPGDFSENSVKSSSQCHYFMGL 419
L+ R YP + K +F+ L
Sbjct: 513 -TINELKIRPYPKFYVYQKDKFDYCSSFFIAL 543
>gi|348688850|gb|EGZ28664.1| hypothetical protein PHYSODRAFT_474162 [Phytophthora sojae]
Length = 694
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 169/490 (34%), Positives = 264/490 (53%), Gaps = 25/490 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
I T+ P D+ + +L+ + + S+ R +L L I + W+K+V MDKG+
Sbjct: 20 IRTTPPEPKDLEQSAKLQSFMDEHFPTESDANITRRSLILAELRSIFRQWVKQVCMDKGV 79
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
EE +A ++ GSYRLGV P DID +CV P + TR +DFF L + + P V
Sbjct: 80 P-EEMAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTR-EDFFSSLKEIFLQHPKV 137
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L + A VP++ F + +++DL A L + IPE+L+ L D +L +D T SLNG
Sbjct: 138 SNLVAIEGAIVPILTFDYEEINIDLQIAILPRNSIPENLNILDDHVLVGVDPATEKSLNG 197
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVT+ ++ L PN +F S LR +R WAKRRG+YSN MG+LGG+NW +LV + QLYP A
Sbjct: 198 PRVTELMIKLTPNRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTA 257
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
P+ L+ RFF + +WKWP + LC + VW+ + +R +MPI+TP+YP
Sbjct: 258 APSTLLLRFFMVLNNWKWPLAIQLCKTHDANLGLEVWNANAGH-NRYQVMPILTPAYPSM 316
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEI-EAGKRTWITLFEPYHFFGSFKNYLQIHIAAK 362
NSS+NVS+ +L +M+EEF+R + +++ G W LFEP FF ++YL + + +
Sbjct: 317 NSSFNVSTHSLTVMKEEFKRGLTIVQDVLSKGGSEWGPLFEPSDFFAVHQHYLAVEVYTE 376
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRL------YPGDFSENSVKSSSQCHYF 416
+ W G+ ESR+R+L+ + + CRL +P F + +
Sbjct: 377 KQEEEAAWCGFCESRMRKLVESLAYNPA---LCRLRAYTKKFPLSFVTGGEAPAGEQPNG 433
Query: 417 MGLGR--KQGVSPQDGEKFDMRL----------TVEEFKSHVVWMYSSWKQGMQIHVSHL 464
L + K GV G D R +VE FK++ ++ ++ M + V+ +
Sbjct: 434 AALAQPSKFGVCFYVGFDIDRRQLRSREVSIDNSVEYFKNNDLYRWNKRTPTMDVRVTPV 493
Query: 465 RCQDIPDFVF 474
+ +P+ VF
Sbjct: 494 VWKALPESVF 503
>gi|389584571|dbj|GAB67303.1| poly(A) polymerase PAP [Plasmodium cynomolgi strain B]
Length = 628
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/432 (36%), Positives = 245/432 (56%), Gaps = 40/432 (9%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT D+ ++ ++L L+ +E R VLG ++ + +++ +++ +GI
Sbjct: 101 ISLNYPTDEDLKRANDVVELLKSYNLYETEHALKKRERVLGMINKLFHEFVVEISISQGI 160
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+EE + + L+TFGSYRLGV P++DID + + P TR + FF + + LQ+ V
Sbjct: 161 -NEEDAKYIHGNLYTFGSYRLGVITPNSDIDCIFLAPQNITR-EIFFNEFYLKLQQDKNV 218
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSL-QDSLLHNLDEQTVLSLN 182
L +P+ P+I+F ++ V +DLL A L + + + SL D +L NLDE TV SLN
Sbjct: 219 RKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDEVTVRSLN 278
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
G RV D IL+ VP+ +FR+TLR ++ WAK RGIYSN +GFLGGI+WALL A+VCQLYPN
Sbjct: 279 GIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAKVCQLYPN 338
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPI-QYQAMP----HHVWDPRSNQRDRKHLMPIIT 297
+ L+ +FF++++ W W PV++ I +Y + VWDP N +D+ H+MPIIT
Sbjct: 339 YNVSQLICKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPEKNIKDKLHVMPIIT 398
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAG----------------------- 334
P++PC NS++NV+ T I+ +EF+RA + +E
Sbjct: 399 PAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVMNQANGIVTPVSTPS 458
Query: 335 -------KRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIER 387
W + +P F ++K++L I I A N + WKGW+ES++R L +E
Sbjct: 459 SNSSSSSSSIWTNILQPLDLFATYKHFLHIQIMATNELIYNSWKGWIESKIRLLFKKLE- 517
Query: 388 DMGGVLQCRLYP 399
L+ R YP
Sbjct: 518 -TINELRIRPYP 528
>gi|389639278|ref|XP_003717272.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
gi|351643091|gb|EHA50953.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
Length = 616
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/390 (40%), Positives = 233/390 (59%), Gaps = 6/390 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S PT + +T L L + F E+ R VL L I ++K V K
Sbjct: 13 VSVHLPTEEEKQATDSLLAELRAQNSFEGPVETEKRFAVLRSLQEIADAFVKTVARKKEP 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
+ I++A K+F +GS RLGV GP +DID L V P Y TR D F F L +
Sbjct: 73 DNAVLIKDARGKVFAYGSLRLGVWGPGSDIDTLVVAPRYVTREDYFEHFPGLLVEMAPPN 132
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQ-FSVIPEDLD-SLQDS-LLHNLDEQTV 178
+ DL+ V DA VP+IKF+F+G+S+DL+++++ +P D + +L DS LL LDE+ +
Sbjct: 133 AITDLSVVVDAFVPIIKFEFSGISIDLIFSRIATMKQLPADPNWNLSDSNLLRGLDEKEL 192
Query: 179 LSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQ 238
S+NG RVTD I+SLVP FR+ LR ++ WA+RR IY N +GF GG+ WA+LVARVCQ
Sbjct: 193 RSVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGVAWAMLVARVCQ 252
Query: 239 LYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITP 298
LYP A +V+V++FF I W WP PV+L I+ + +W+P+ DR HLMPIITP
Sbjct: 253 LYPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLMPIITP 312
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQI 357
+YP +++N++ ++ ++ E +A +L I GK W LF+ + FF FK Y+Q+
Sbjct: 313 AYPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGKLPWKDLFQKHTFFTKDFKYYIQV 372
Query: 358 HIAAKNAGDFRQWKGWVESRLRQLIHMIER 387
A+K+ + W G+VES++R L+ +ER
Sbjct: 373 IAASKDKESHKLWSGFVESKVRLLVQGLER 402
>gi|325180233|emb|CCA14636.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 677
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 171/496 (34%), Positives = 267/496 (53%), Gaps = 35/496 (7%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEE--ESLGRVEVLGRLDGIVKDWIKRVTMDK 61
I + P +D+ +K+L+ + +K F +E R +L L I +DW+K+V + K
Sbjct: 20 IRVTPPEPIDLEQSKKLKDYM--DKHFPTENMVNITRRSLILAELRTIFRDWVKQVCIRK 77
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G+ EE +A + GSYRLGV P DID +CV P TR +DFF L ++ +
Sbjct: 78 GVP-EEIAADAGGLILVSGSYRLGVNEPGADIDTICVAPQQITR-EDFFTSLKKIFMQHS 135
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L + A VP++ F + +++DL A L + IPEDL+ L D +L +D T SL
Sbjct: 136 KVTNLNAIEGAVVPLLTFDYEEINIDLQIAILPRNTIPEDLNILNDQILVGVDAATEKSL 195
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RVT+ ++ L PN +F S LR +R WAKRRG+YSN MG+LGG+NW +LV + QLYP
Sbjct: 196 NGPRVTELMIKLTPNRDSFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYP 255
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
A P L+ RFF + A+WKWP + LC + + VW+ +R H+MPI+TP+YP
Sbjct: 256 TAAPTTLLLRFFMVLANWKWPLAIQLCKTEDVKLGLEVWNANVGN-NRYHVMPILTPAYP 314
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEI-EAGKRTWITLFEPYHFFGSFKNYLQIHIA 360
NSS+NVS+ +L +M++EF+RA ++ +EI G W LFE FF ++YL + +
Sbjct: 315 SMNSSFNVSTHSLAVMKQEFERALKIVQEILNRGAVEWDPLFESSDFFAVQQHYLAVDVY 374
Query: 361 AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF------------------ 402
N D + W + ESR+R+LI + + + R +P F
Sbjct: 375 TTNREDEQAWCSFCESRIRKLIESLAY-IPMLCHLRAFPKRFPLSFVGQDQDEKIETPTD 433
Query: 403 ---SENSVKSSSQCHYF-MGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQ 458
E C Y + R+Q S + + +V+ FK + ++ ++ M
Sbjct: 434 RNNEEKETFKYGACFYVGFDIDRRQLRS----REVSIDSSVDYFKHNDLYRWNKRSDSMD 489
Query: 459 IHVSHLRCQDIPDFVF 474
+ ++ + +++PD+VF
Sbjct: 490 VRITPVLWKNLPDYVF 505
>gi|301118192|ref|XP_002906824.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262108173|gb|EEY66225.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 691
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 169/492 (34%), Positives = 267/492 (54%), Gaps = 29/492 (5%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
I T+ P D+ + +L+ + + S+ R +L L I + W+K+V M+KG+
Sbjct: 20 IRTTPPEPKDLEQSAKLQTYMDEHFPTESDANITRRSLILAELRSIFRAWVKQVCMEKGV 79
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
EE +A ++ GSYRLGV P DID +CV P + TR +DFF L + + P V
Sbjct: 80 P-EEMAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTR-EDFFSSLKEIFLKHPKV 137
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
L + A VP+I F + +++DL A L + IPE+L+ L D +L +D T SLNG
Sbjct: 138 SQLVAIEGAIVPLITFDYEEINIDLQIAILPRNSIPENLNILDDHVLVGVDPATEKSLNG 197
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVT+ ++ L PN +F S LR +R WAKRRG+YSN MG+LGG+NW +LV + QLYP A
Sbjct: 198 PRVTELMIKLTPNRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTA 257
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
P+ L+ RFF + +WKWP + LC + VW+ + +R +MPI+TP+YP
Sbjct: 258 APSTLLLRFFMVLNNWKWPLAIQLCKTHDAKLGLEVWNANAGH-NRYQVMPILTPAYPSM 316
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEI-EAGKRTWITLFEPYHFFGSFKNYLQIHIAAK 362
NSS+NVS+ +L +M+EEF+R + +++ G W LFEP FF ++YL + + +
Sbjct: 317 NSSFNVSTHSLTVMKEEFKRGLTIVQDVLSKGGSEWGPLFEPSEFFAVHQHYLAVEVYTE 376
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRK 422
+ + W + ESR+R+L+ + + + + R+Y FS + V + +G G+
Sbjct: 377 KQDEEQAWCSFCESRMRKLVESLAYN-PALCRLRVYTKKFSLSYVTAGEAP---VG-GQS 431
Query: 423 QGVSPQDGEKF----------DMRL----------TVEEFKSHVVWMYSSWKQGMQIHVS 462
G P KF D R +VE FK++ ++ ++ M + V+
Sbjct: 432 NGQPPAQPSKFGACFYVGFDIDRRQLRSREVSIDSSVEYFKNNDLYRWNKRTPTMDVRVT 491
Query: 463 HLRCQDIPDFVF 474
+ + +P+ VF
Sbjct: 492 PVLWKALPESVF 503
>gi|440468857|gb|ELQ37991.1| Poly(A) polymerase pla1 [Magnaporthe oryzae Y34]
Length = 611
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/390 (40%), Positives = 233/390 (59%), Gaps = 6/390 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S PT + +T L L + F E+ R VL L I ++K V K
Sbjct: 13 VSVHLPTEEEKQATDSLLAELRAQNSFEGPVETEKRFAVLRSLQEIADAFVKTVARKKEP 72
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
+ I++A K+F +GS RLGV GP +DID L V P Y TR D F F L +
Sbjct: 73 DNAVLIKDARGKVFAYGSLRLGVWGPGSDIDTLVVAPRYVTREDYFEHFPGLLVEMAPPN 132
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQ-FSVIPEDLD-SLQDS-LLHNLDEQTV 178
+ DL+ V DA VP+IKF+F+G+S+DL+++++ +P D + +L DS LL LDE+ +
Sbjct: 133 AITDLSVVVDAFVPIIKFEFSGISIDLIFSRIATMKQLPADPNWNLSDSNLLRGLDEKEL 192
Query: 179 LSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQ 238
S+NG RVTD I+SLVP FR+ LR ++ WA+RR IY N +GF GG+ WA+LVARVCQ
Sbjct: 193 RSVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGVAWAMLVARVCQ 252
Query: 239 LYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITP 298
LYP A +V+V++FF I W WP PV+L I+ + +W+P+ DR HLMPIITP
Sbjct: 253 LYPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLMPIITP 312
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQI 357
+YP +++N++ ++ ++ E +A +L I GK W LF+ + FF FK Y+Q+
Sbjct: 313 AYPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGKLPWKDLFQKHTFFTKDFKYYIQV 372
Query: 358 HIAAKNAGDFRQWKGWVESRLRQLIHMIER 387
A+K+ + W G+VES++R L+ +ER
Sbjct: 373 IAASKDKESHKLWSGFVESKVRLLVQGLER 402
>gi|238013826|gb|ACR37948.1| unknown [Zea mays]
Length = 428
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 161/393 (40%), Positives = 223/393 (56%), Gaps = 14/393 (3%)
Query: 247 VLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSS 306
+LVSRFF++F W+WPNPVMLC I+ + + VWDPR N RDR H MPIITP+YPC NSS
Sbjct: 1 MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 60
Query: 307 YNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGD 366
YNVS++TLR+M E+FQ +C+EIE K +W LFEP+ FF ++KNYLQ+ I A++ D
Sbjct: 61 YNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAEDDED 120
Query: 367 FRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVS 426
R WKGWVESRLRQL IERD G+LQC YP ++++ S + + C +FMGL RK+GV
Sbjct: 121 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPS-RQCAHCAFFMGLSRKEGVK 179
Query: 427 PQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNE 486
Q+G++FD+R TV+EF+ H + MY WK GM++ VSH+R + +P +VFP G + P
Sbjct: 180 IQEGQQFDIRGTVDEFR-HEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRP----- 233
Query: 487 KKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLK--SGPSVEPSTSSV 544
R V + +E TA S + + V D K S V P S
Sbjct: 234 --RPSRHVNHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSPVHPKNSPQ 291
Query: 545 SSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISSFCQNESLEE 604
S ST +R + D + S + Q + T+ +A T + C +++ +
Sbjct: 292 SGSTGDETRCNN-QIKRAPSDASGGSPASPQASERSPDTILSAPRCTTTGAVCSGDAISK 350
Query: 605 LEPPELTAPCF--KTAFVATQKPIIKLQFSSLV 635
L C A T K + + S LV
Sbjct: 351 HSSVPLVENCTTPTVAVCTTLKRVAEKVVSELV 383
>gi|3127182|gb|AAC16061.1| poly(A) polymerase II [Gallus gallus]
Length = 621
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 170/412 (41%), Positives = 241/412 (58%), Gaps = 21/412 (5%)
Query: 103 ATRH---DDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIP 159
A RH DFF + L++ V+DL V +A VPVIK F+G+ +D+L+A+L IP
Sbjct: 2 APRHVERSDFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIP 61
Query: 160 EDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSN 219
EDLD DSLL NLD + + SLNGCRVTD IL LVPNI NFR TLR ++ WAKR IYSN
Sbjct: 62 EDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSN 121
Query: 220 AMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHV 279
+GFLGG++WA+LVAR CQLYPNA+ + LV +FF +F+ W+WPNPV+L + + V
Sbjct: 122 ILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPV 181
Query: 280 WDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWI 339
WDPR N DR HLMPIITP+YP NS+YNVS +T +M EEF++ + +EI K W
Sbjct: 182 WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWS 241
Query: 340 TLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYP 399
LFE +FF +K+Y+ + +A +W G VES++R L+ +E++ L + P
Sbjct: 242 KLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITL-AHVNP 300
Query: 400 GDF---SENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS-- 452
F EN K + + +GL K+ ++ E + LT ++ F V +
Sbjct: 301 QSFPAPKENPDKEEYRTMWVIGLVFKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSK 357
Query: 453 -WKQGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKS 503
++ M+I H++ + + + P L +KK+ E + T L S
Sbjct: 358 MFEMDMKIAARHVKRKQLHQLL------PNHVLQKKKKHSTEGVRLTALNDS 403
>gi|224004590|ref|XP_002295946.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585978|gb|ACI64663.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 532
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 185/477 (38%), Positives = 252/477 (52%), Gaps = 47/477 (9%)
Query: 39 RVEVLGRLDGIVKDWIKRVTMDK--GISDEEQIQE-----ANAKLFTFGSYRLGVAGPST 91
R VL L+ ++ W K ++D++ ++ L +FGSYRL V PS+
Sbjct: 4 RKRVLRDLEDMLCRWSDETFFAKNAALNDDDNTNRKVPPTSSPALLSFGSYRLSVHTPSS 63
Query: 92 DIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYA 151
DID L + P + TR DDFF LQ V++L PV A PVIKF+ GV +DL++A
Sbjct: 64 DIDCLVLAPPHLTR-DDFFTTWVTALQNEARVKELHPVSGAYTPVIKFEIEGVKIDLIFA 122
Query: 152 QLQFSVIP--EDLDS-----LQDSLLHNLDEQTVLSLNGCRVTDRILSLVPN-------- 196
+L I ++LD L D+LL LDE +V S+NG RV +LS +
Sbjct: 123 RLNEPTINNHDELDEIKEMELDDTLLIGLDETSVRSINGVRVAQYLLSTLETTDKNRKNY 182
Query: 197 -----IRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSR 251
+ NFR TLR ++ WA+ G+YSN +GFLGG+NWA+LV VC+ YP+A + L+
Sbjct: 183 DSATQVDNFRLTLRAVKEWARVHGLYSNVLGFLGGVNWAILVCWVCKRYPDAPASTLLQI 242
Query: 252 FFKIFAHWKWPNPVMLCPIQYQAMPHHV-----WDPRSNQRDRKHLMPIITPSYPCTNSS 306
FFK F+ WKWP PV+L Q Q P V WDP SN RD KHLMPIITP YP NSS
Sbjct: 243 FFKTFSTWKWPMPVLLS-TQKQRPPEGVNNLPVWDPSSNFRDAKHLMPIITPCYPSMNSS 301
Query: 307 YNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGD 366
YNV LR +++EF RA +LC ++ G + W LFE FF NYLQ+ A N D
Sbjct: 302 YNVGEPQLRRLRDEFARASKLCSDVAFGTKKWGVLFEWNEFFQQHANYLQVDTVATNEDD 361
Query: 367 FRQWKGWVESRLRQLIHMIERDMGGVLQCRLYP-GDF---SENSVKSSSQCHYFMGLGRK 422
FR W G E+R+R LI +E GV R YP F E+ + +F+ L
Sbjct: 362 FRAWFGLCEARMRLLIAGLESPGFGV---RAYPFAKFFHRREDGGGGNYIASFFIALRFA 418
Query: 423 QGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVR 479
V K D+ V +F + V+ + + M + + + +D+P FVF R
Sbjct: 419 NKVW-----KVDLAPLVTDFLT-VINSWDGREPTMDLMIRLVSRKDLPSFVFDAEKR 469
>gi|449296009|gb|EMC92029.1| hypothetical protein BAUCODRAFT_78629 [Baudoinia compniacensis UAMH
10762]
Length = 594
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/386 (37%), Positives = 230/386 (59%), Gaps = 6/386 (1%)
Query: 5 STSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGIS 64
S APT D+ L L + F ++ R V+ +L G+++ ++ V KG+
Sbjct: 14 SNDAPTPADLKLNDSLIAELKAQDNFPPSSDTERRDAVIAKLKGLLRQMVQIVGKKKGLP 73
Query: 65 DEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL-- 122
++ A +++T+GS+RLGV GP++D+D L V P + TR ++FF + +L+++
Sbjct: 74 -AGILETAGGEVYTYGSFRLGVYGPNSDVDTLMVAPKHVTR-EEFFEYMPDLLRKSAAPG 131
Query: 123 -VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
+ +L PVP P+IK K GV +DL++ LQ +P+ +D D+LL LD+ V +
Sbjct: 132 EITELVPVPGIGTPIIKLKIQGVDIDLIFCSLQVQSVPDKMDLADDNLLRGLDDTDVRCV 191
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RVT+RIL LVP + FR LR ++ WA+RR IY N +G+ GG+ WA+LVARVCQLYP
Sbjct: 192 NGTRVTNRILQLVPQTKTFRYALRAIKLWAQRRAIYGNIVGYPGGVAWAILVARVCQLYP 251
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
A+ ++V RFF I W WP PV L ++ WDP +++ D HLMPI+TP+ P
Sbjct: 252 KAVAPLIVQRFFFIVKRWNWPKPVFLQHKVESSLVIREWDPNTSRHDAGHLMPILTPAVP 311
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS-FKNYLQIHIA 360
TN+++ V +T +M E +R +++ +I + + W LFE ++FF + +K+Y+ + A
Sbjct: 312 STNTAHTVGPSTKMVMMRELERGEQIIADIYSKSKPWKALFERHNFFTTAYKHYICVVTA 371
Query: 361 AKNAGDFRQWKGWVESRLRQLIHMIE 386
+K+ W G V+S+++ L+ IE
Sbjct: 372 SKSKDAQDAWAGLVQSKIKWLVQGIE 397
>gi|255556450|ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative [Ricinus communis]
Length = 492
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/442 (35%), Positives = 243/442 (54%), Gaps = 19/442 (4%)
Query: 20 LEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTF 79
L K + +E L S E R V+ L IV W K+V + + QI NA + T+
Sbjct: 9 LLKFMANEGLVPSPREEEKRKNVILNLKQIVVAWAKKVAWQRRLP-RLQIASTNATILTY 67
Query: 80 GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKF 139
GSY LGV GP +DIDA+CVGP +AT +DFF L ML+ P V ++ V DA+VP+++F
Sbjct: 68 GSYGLGVYGPESDIDAICVGPFFATLAEDFFIVLRNMLKNRPEVSNIHCVKDAKVPLMRF 127
Query: 140 KFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRN 199
KF+G+S+DL YAQL+ +P+++D L L N+DE + SL+G R RIL VPN+ N
Sbjct: 128 KFDGISIDLPYAQLKVLAVPDNVDMLNPFFLMNIDETSWKSLSGVRANQRILQFVPNLEN 187
Query: 200 FRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHW 259
F+S LRC++ WA+RRG+ N GFLGG++ A+L A VCQ YPNA + L+S FF +A W
Sbjct: 188 FQSMLRCIKLWARRRGVCGNLNGFLGGVHLAILSAVVCQKYPNASVSALISNFFATYATW 247
Query: 260 KWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQE 319
WP PVML + P + + + MPI P P N++ +T ++
Sbjct: 248 PWPTPVML--------QDGMSSPAEDFIETRSFMPIRLPCSPHEYCHSNITKSTYYRIRT 299
Query: 320 EFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLR 379
EF R L +++ W +FEP+ + + +++I+++A + + W GWV+SR R
Sbjct: 300 EFLRGHSLTKDLLKPDFDWNGIFEPFPYSKKYTRFVKIYLSAPDQDEVGDWVGWVKSRFR 359
Query: 380 QLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTV 439
L+ +E G QC P ++++ V + Y+ G++P D+
Sbjct: 360 ALLLKLEGLQG---QCDPSPVEYADRDVSEPNVVFYW-------GLNPSRSNYIDLESVE 409
Query: 440 EEFKSHVVWMYSSWKQGMQIHV 461
E+F ++ Y ++ +++ +
Sbjct: 410 EDFLRNIYSGYHGTRRKLELSI 431
>gi|452986896|gb|EME86652.1| hypothetical protein MYCFIDRAFT_49534 [Pseudocercospora fijiensis
CIRAD86]
Length = 612
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 151/388 (38%), Positives = 238/388 (61%), Gaps = 6/388 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+ST+ P+ D + L L + F S EE+ R VL +L +++ ++ V KG+
Sbjct: 15 LSTAPPSRQDTELGETLLTELKAQNNFESPEETAKRNSVLQKLQKLLQKLVQDVGKKKGM 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E ++EA K+FT+GSYRLGV GP +DID+L V P + +R DDFF ++ M++ T
Sbjct: 75 S-PELLKEAGGKIFTYGSYRLGVYGPGSDIDSLMVAPKHVSR-DDFFERMPGMIRATFKP 132
Query: 124 EDLTPVPDARV---PVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
E++T + P+IK K GV +DL++A LQ IP +LD +LL LD+ +
Sbjct: 133 EEITEMVVVAAAAVPIIKTKLMGVDIDLIFANLQRDSIPTNLDLGDTNLLRGLDDTDLKC 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
+NG RVTDRIL+LVP R FR LR ++ WA++R +Y + GG+ + ++VARVCQLY
Sbjct: 193 VNGTRVTDRILTLVPQTRIFRIALRAVKLWAQKRAVYGAIACYPGGVAYGMIVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
PNA +V +FF + W WP+P+ L + + WDP +N D++HLMP+ITP+Y
Sbjct: 253 PNAAAPKIVQKFFWLLHTWAWPSPIYLQAREKGPLGKTEWDPTTNPGDKRHLMPVITPAY 312
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHI 359
PC NS++ ++ +T+ ++++E R +++ EI GKR W LF + FF ++++Y+ I
Sbjct: 313 PCMNSTHTITPSTMAVLKKESDRGEKIMNEIYEGKRPWKDLFAKHTFFSDAYQHYICIIT 372
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
AA+ + W G V+SR+++L+ IE+
Sbjct: 373 AARTKDAQQAWSGLVQSRVKRLLAGIEQ 400
>gi|147856999|emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
Length = 604
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 149/371 (40%), Positives = 217/371 (58%), Gaps = 10/371 (2%)
Query: 20 LEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTF 79
L + + +E L S EE L R V+ +L IV W+KRV + ++QI +A + T+
Sbjct: 120 LLQFMSNEGLIPSPEEELKRKNVIEKLKEIVLTWVKRVAWQRQ-RPKQQIAVTSATILTY 178
Query: 80 GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKF 139
GSY LGV GP +DIDALCVGP +A+ DDFF L ML+ P V ++ V DA+VP+++F
Sbjct: 179 GSYGLGVHGPESDIDALCVGPFFASMADDFFIVLRNMLESRPEVSEIHCVKDAKVPLMRF 238
Query: 140 KFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRN 199
KF+G+SVDL YAQL+ +PE+L+ L L N+DE + SL+G R + IL LVPN+ N
Sbjct: 239 KFDGISVDLPYAQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANECILQLVPNVEN 298
Query: 200 FRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHW 259
F+S LRC++ WAKRRG+Y N G+ GG++ A+L A VCQ P+A NVL+S FFK F+ W
Sbjct: 299 FQSILRCIKLWAKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLMSSFFKTFSGW 358
Query: 260 KWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQE 319
WP PV L + P R+ + LMPI P P N++ +T +
Sbjct: 359 PWPTPVALEDGRL---------PTGGTRETRALMPIQLPCSPYGYCHSNITKSTFYRITT 409
Query: 320 EFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLR 379
E L ++ W +FEP+ + + +++I++++ N + W GWV+SR R
Sbjct: 410 ELTLGHALTRDLLRLDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWVGWVKSRFR 469
Query: 380 QLIHMIERDMG 390
L+ +E G
Sbjct: 470 FLLAKVEEVQG 480
>gi|225432026|ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
gi|296083219|emb|CBI22855.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 157/427 (36%), Positives = 236/427 (55%), Gaps = 20/427 (4%)
Query: 20 LEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTF 79
L + + +E L S EE L R V+ +L IV W+KRV + ++QI +A + T+
Sbjct: 79 LLQFMSNEGLIPSPEEELKRKNVIEKLKEIVLTWVKRVAWQRQ-RPKQQIAVTSATILTY 137
Query: 80 GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKF 139
GSY LGV GP +DIDALCVGP +A+ DDFF L ML+ P V ++ V DA+VP+++F
Sbjct: 138 GSYGLGVHGPESDIDALCVGPFFASMADDFFIVLRNMLESRPEVSEIHCVKDAKVPLMRF 197
Query: 140 KFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRN 199
KF+G+SVDL YAQL+ +PE+L+ L L N+DE + SL+G R + IL LVPN+ N
Sbjct: 198 KFDGISVDLPYAQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANECILQLVPNVEN 257
Query: 200 FRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHW 259
F+S LRC++ WAKRRG+Y N G+ GG++ A+L A VCQ P+A NVL+S FFK F+ W
Sbjct: 258 FQSILRCIKLWAKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLMSSFFKTFSGW 317
Query: 260 KWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQE 319
WP PV L + P R+ + LMPI P P N++ +T +
Sbjct: 318 PWPTPVALEDGRL---------PTGGTRETRALMPIQLPCSPYGYCHSNITKSTFYRITT 368
Query: 320 EFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLR 379
E L ++ W +FEP+ + + +++I++++ N + W GWV+SR R
Sbjct: 369 ELTLGHALTRDLLRLDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWVGWVKSRFR 428
Query: 380 QLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTV 439
L+ +E G C P +F + + ++ GV P D+ +
Sbjct: 429 FLLAKVEEVQG---LCDPNPTEFIDPDAGGPNVVFFW-------GVQPGRINFSDIDVVE 478
Query: 440 EEFKSHV 446
++F ++
Sbjct: 479 DDFMQNI 485
>gi|453087599|gb|EMF15640.1| Poly(A) polymerase [Mycosphaerella populorum SO2202]
Length = 607
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/389 (39%), Positives = 237/389 (60%), Gaps = 8/389 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+ST P D +L L + F S EE+ R VL +L ++ ++RV KG+
Sbjct: 15 LSTEPPKPRDNELHDQLLAELKAQNNFESPEETAKRQNVLVKLQKLLLQLVQRVGKKKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ E ++EA K+FT+GS+RLGV GP +DID L + P + TR +DFF + M+++
Sbjct: 75 -NPELLKEAGGKIFTYGSFRLGVYGPGSDIDTLMLSPKHVTR-EDFFEYMPDMIRQAIPA 132
Query: 124 EDLT---PVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
ED+T PVP VP+IK + G+S+DL++ L +P +L+ LL L E +
Sbjct: 133 EDITELVPVPGIGVPIIKTEIEGISIDLIWCTLHKDRVPPNLELNDSELLRGLSETDLKC 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
+NG RVTDRILSLVP R FR LR ++ WA++RG+Y N G+ GG+ +A++VARVCQLY
Sbjct: 193 VNGTRVTDRILSLVPQTRTFRIALRAVKMWAQKRGLYGNVYGYPGGVAYAMMVARVCQLY 252
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQY-QAMPHHVWDPRSNQRDRKHLMPIITPS 299
P A + +V++FF + +W+WP+P+ L + ++ WDP+ N RD++HLMP+ITP+
Sbjct: 253 PRAAASTIVAKFFWVVKNWQWPSPIYLQAREKGPSLNQQEWDPQKNFRDKRHLMPVITPA 312
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS-FKNYLQIH 358
YP N+++ ++ +T ++ E R E+ +I +GK+ W L + FF S +++Y+ I
Sbjct: 313 YPVMNATHTITRSTKEVLIRELNRGHEIMADIYSGKKQWRDLLIKHEFFTSAYQHYIVIV 372
Query: 359 IAAKNAGDFRQWKGWVESRLR-QLIHMIE 386
A+K D + W G V SRLR +L+ IE
Sbjct: 373 TASKTKDDQQAWAGLVTSRLRFKLVEGIE 401
>gi|119186325|ref|XP_001243769.1| hypothetical protein CIMG_03210 [Coccidioides immitis RS]
Length = 587
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 153/388 (39%), Positives = 225/388 (57%), Gaps = 18/388 (4%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT ++ L L + F + E+ R ++L + + +++K V KG+
Sbjct: 15 ISTALPTPSELAENDNLIAELKRQNNFEAPSETEKRNQMLHLIQRVTVEFVKTVGRRKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHD---DFFGKLFRMLQET 120
S + I + K+F +GSYRLGV GP +DID L VGP + D DF L RM +
Sbjct: 75 S-QAAIDVSGGKIFAYGSYRLGVYGPGSDIDTLVVGPKHVAIEDFFLDFPPTLERMAPKD 133
Query: 121 PLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
+E LTPVPDA VP+IK + +G+S+DL++A+L IP DLD LL LDE+ +
Sbjct: 134 S-IEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNKELLRGLDEREIRC 192
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
+NG RVTD IL LVP + FR LR ++ WA+ G+ WA+LVARVCQLY
Sbjct: 193 VNGTRVTDEILELVPEKKTFRLALRAIKLWAQ------------SGVAWAMLVARVCQLY 240
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P A +V+V +FF+I +W WP PV+L PI+ + VW+P+ DR HLMPIITP+Y
Sbjct: 241 PQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAY 300
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHI 359
P +++NVS +T ++ E +R ++ E+I G+ W LF + FF +K YL I
Sbjct: 301 PSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSKDYKYYLNITA 360
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIER 387
++ + W G VE++LR L+ +++
Sbjct: 361 SSTSKEAQSVWSGLVEAKLRHLVIALDK 388
>gi|323453660|gb|EGB09531.1| hypothetical protein AURANDRAFT_24142, partial [Aureococcus
anophagefferens]
Length = 402
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 156/376 (41%), Positives = 214/376 (56%), Gaps = 27/376 (7%)
Query: 32 SEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPST 91
S+ E R V+G L + + W++ V KG+SDE EA KL+T GSYRL V P
Sbjct: 9 SDGELRRRERVMGELKRLFQAWVRSVCKAKGLSDE-LASEAGGKLYTSGSYRLRVHEPGA 67
Query: 92 DIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYA 151
DID++CV P + TR +DFF L ML E P VE+L V A VP++ F +GV++DLL+A
Sbjct: 68 DIDSICVAPNHCTR-EDFFDTLKAMLLEHPQVENLRSVETAVVPIMTFDLDGVNIDLLFA 126
Query: 152 QLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVP-NIRNFRSTLRCLRFW 210
L + IP LD +D++L +DE T SLNG RVT+ I LV N +F LR R W
Sbjct: 127 HLPLNAIPASLDIDEDAVLQGVDEATEKSLNGPRVTNLIYKLVSHNYESFLQVLRVARVW 186
Query: 211 AKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPI 270
AKRRGIYSN +G+ GGIN+ +LVA +CQL+P A P+ L+ +FF IFA W WP P +LC
Sbjct: 187 AKRRGIYSNKLGYFGGINFNILVALICQLFPKATPSYLLCKFFAIFAKWDWPAPAILCRP 246
Query: 271 QYQAMPHHVWDPRSNQRD--------RKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQ 322
VW + Q R +LMPI+TP+YP NS+ NV+ + ++++EF
Sbjct: 247 LDHGYGFEVWGQNAEQLRGRMAYHNLRNNLMPIVTPAYPAMNSAANVNPWSFAVLRDEFA 306
Query: 323 RAKELCEEIEA---------------GKRTWITLFEPYHFFGSFKNYLQIHIAAKNAG-D 366
R E+C+ I A G W L E FF + YL +++ D
Sbjct: 307 RGAEVCKRIVARHAELAENGAVDPDVGGPLWDELVEKTDFFDKYDAYLAVNVLGDGEKED 366
Query: 367 FRQWKGWVESRLRQLI 382
F +KG++ SRLR+L+
Sbjct: 367 FDNFKGFLSSRLRKLV 382
>gi|358332465|dbj|GAA51116.1| poly(A) polymerase, partial [Clonorchis sinensis]
Length = 1210
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 147/323 (45%), Positives = 205/323 (63%), Gaps = 5/323 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S PT D+ ++ELE L +F + EE R E L RL I WIK+ +++ +
Sbjct: 890 LSFKKPTEQDLKDSQELETTLAQLDIFETPEEITQRREALMRLQEISNKWIKQKAVEQNL 949
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV D+D+L V P + TR + FF + +L E P V
Sbjct: 950 P-PHVAKATTGKIFTFGSYRLGVNFKGADVDSLLVVPRFITRQE-FFSEFQSVLSENPHV 1007
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDS--LLHNLDEQTVLSL 181
ED+ V DA VPV+K KF GV +DLL+AQ+ I E+ + +++ L+ N+DE V S+
Sbjct: 1008 EDIHAVVDAFVPVLKLKFMGVEIDLLFAQIDQMNIAENFNLCENTEVLMRNMDEHDVRSI 1067
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RV + IL+LV N +F+ L+ +RFWAKRR IYSN +GFLGG++WA+LV+R+CQLYP
Sbjct: 1068 NGVRVNEDILNLVYNKNSFKVALKVIRFWAKRRNIYSNTLGFLGGVSWAILVSRICQLYP 1127
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQY-QAMPHHVWDPRSNQRDRKHLMPIITPSY 300
A P++LV FFKIF+ W WP PV L +Y ++ VWDPR N D+ HLMPI+TPSY
Sbjct: 1128 YASPSMLVYLFFKIFSQWPWPKPVRLRESEYIPSLCLPVWDPRLNLMDQYHLMPILTPSY 1187
Query: 301 PCTNSSYNVSSTTLRIMQEEFQR 323
P NS+YNV + I++ E ++
Sbjct: 1188 PSQNSAYNVQRSNRIILERELKQ 1210
>gi|428168831|gb|EKX37771.1| hypothetical protein GUITHDRAFT_158559 [Guillardia theta CCMP2712]
Length = 338
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 199/329 (60%), Gaps = 10/329 (3%)
Query: 27 EKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGV 86
E L SE ES RV L +L+ + +D++KRV + ++ + +L TFGSYRL V
Sbjct: 4 ENLLPSESESARRVRTLAKLNEMCRDFVKRVYEKNNLMEQYSEENPPYQLRTFGSYRLDV 63
Query: 87 AGPSTDIDALCVGPCYATRH---DDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNG 143
P D+D + + TRH DD F L+ +Q + +L V +ARVPVIKF+ +
Sbjct: 64 HLPGADMDTVMI----VTRHIHRDDMFNDLYVAMQARKDITNLIKVQEARVPVIKFQMDE 119
Query: 144 VSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRST 203
DL A+L ++ IPED D D L N+D+Q+V SLNG RVTD I SLVP ++ +
Sbjct: 120 FEFDLAMARLSYATIPEDFDVTDDKHLKNVDQQSVTSLNGVRVTDTIRSLVPTMKTLKYC 179
Query: 204 LRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPN 263
+R L+ WAK+RG+Y N +GFLGGI+ ++ AR+ QLYP ALP+ L+ FF ++ WKWP
Sbjct: 180 IRALKLWAKKRGVYKNVLGFLGGISLEIMAARIGQLYPKALPSRLLYFFFFTYSQWKWPQ 239
Query: 264 PVMLCPI--QYQAMPHHVWD-PRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEE 320
PV L + + VW + DR+HLMPIITP YP N++ NVS +TL++MQEE
Sbjct: 240 PVGLTEVIANSHDLNLPVWGFGATEMSDRRHLMPIITPCYPAQNATANVSKSTLKVMQEE 299
Query: 321 FQRAKELCEEIEAGKRTWITLFEPYHFFG 349
F RAK++C++I G W LFEP F
Sbjct: 300 FTRAKDICKQILEGNAEWSDLFEPLDPFS 328
>gi|326437024|gb|EGD82594.1| hypothetical protein PTSG_03248 [Salpingoeca sp. ATCC 50818]
Length = 840
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 157/389 (40%), Positives = 222/389 (57%), Gaps = 9/389 (2%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E +ST P++ ++ST++LE L E + S E R VL L+ VKDW+ + +++
Sbjct: 4 EPLSTEHPSLEQLMSTRKLETCLKKEGIMESTEGYEQRNRVLANLNAFVKDWLYKYSLEH 63
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G S E Q AK+FTFGS+RLGV + DIDAL P TR FF + L +
Sbjct: 64 GKS-PEAAQLIRAKIFTFGSFRLGVHSKNGDIDALICFPQSVTRAA-FFSSFYDALAQRD 121
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
VEDL A VP IK F GV +DLL AQL I LD D +L NL E V S+
Sbjct: 122 DVEDLHSAESAAVPAIKLTFGGVEMDLLMAQLPADSIAPSLDLSDDDILRNLPETCVRSI 181
Query: 182 NGCRVTDRILSLVPNIR-NFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
NG RVTD+IL L P R +F LR ++ WAKRRGIY NA+ ++GG++ A+LVA++CQL+
Sbjct: 182 NGRRVTDKILELCPAAREDFGLCLRTIKLWAKRRGIYGNALCYVGGVHLAILVAKICQLF 241
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQ---YQAMPHHVWDPRSNQRDRKHLMPIIT 297
P A + LV +FF + W W PV L ++ +PH W P +N D +M I+T
Sbjct: 242 PYATASTLVEKFFWHYKRWDWAIPVELQHVEDLGITHIPH--WSPINNYHDMS-VMKILT 298
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQI 357
P YP N+SY V+ +TL ++ E RA+ + ++I GK TW L++ FFG + +Y+ +
Sbjct: 299 PVYPSQNASYTVTRSTLYRIKRELDRAESVVQKIADGKATWPRLWKQIPFFGVYSHYICV 358
Query: 358 HIAAKNAGDFRQWKGWVESRLRQLIHMIE 386
+ D ++G VES +R L+ +E
Sbjct: 359 QALTNSEQDRTLYEGLVESTVRNLVTSLE 387
>gi|170059284|ref|XP_001865296.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167878124|gb|EDS41507.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 328
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/318 (43%), Positives = 190/318 (59%), Gaps = 11/318 (3%)
Query: 70 QEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPV 129
++ ++TFGSYRLGV +IDALCV P R D +FG +L++ P V + V
Sbjct: 4 EKLGGMIYTFGSYRLGVNHKRANIDALCVAPRNIERQD-YFGSFLELLKKQPEVTECRAV 62
Query: 130 PDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDR 189
+ VP +K +G+ +DLL+A+L IP++ D +D LL NLD + V SLN CR TD
Sbjct: 63 EEVLVPDVKMNLDGIKIDLLFARLALKEIPDNFDLCEDMLLKNLDPKLVRSLNRCRATDE 122
Query: 190 ILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLV 249
IL LVPNI NFR LR + WAK+ GIYSN++G+ GG++WA+LVAR CQL PN + V
Sbjct: 123 ILRLVPNIDNFRLALRSTKLWAKKHGIYSNSLGYFGGVSWAMLVARTCQL-PNVVAATQV 181
Query: 250 SRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNV 309
+FF +F+ WKW +PV L + VWDPR N + R HLMPIITP+YP
Sbjct: 182 HKFFLVFSRWKWSHPVFLKRPDTVNLGFQVWDPRVNVQGRFHLMPIITPAYP-------- 233
Query: 310 SSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQ 369
+T ++M EF R ++ +EI GK W LFE FF ++ + + + + N D +
Sbjct: 234 -HSTRKVMLNEFSRGMQITDEIMLGKAGWDKLFEAPSFFFKYRYIIVLLVTSNNTDDLLE 292
Query: 370 WKGWVESRLRQLIHMIER 387
W VES++R LI +ER
Sbjct: 293 WCELVESKIRYLIQNLER 310
>gi|323452142|gb|EGB08017.1| hypothetical protein AURANDRAFT_27130 [Aureococcus anophagefferens]
Length = 449
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/432 (36%), Positives = 223/432 (51%), Gaps = 42/432 (9%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKR---VTMD 60
I+T P D +++ L L + ++ S+ R VL RL I W + + +
Sbjct: 19 INTDMPAEHDAAASEALVHTLRELGVYESDAGKAVRTGVLDRLRAIADAWCENEWALAIA 78
Query: 61 KGISDEEQIQEANA-------KLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKL 113
+ D + A A +L TFGS RL V P DID + V P + TR FF L
Sbjct: 79 ERACDGADCERALAASAPPRCELRTFGSVRLDVHTPDADIDVVLVAPRHCTRRA-FFDTL 137
Query: 114 FRMLQETPLVE--DLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLH 171
L+ + + V DA PV+K + VDLL+A L +PE LD + D++L
Sbjct: 138 VAALEGDAHIGAGGVMAVRDAYTPVVKLRVGATDVDLLFAPLACDELPEPLDVMDDAVLE 197
Query: 172 NLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWAL 231
LDE + SLNG RV + +LSLVP+ FR LR ++ WA+ +G+YSN +G LGG+N A+
Sbjct: 198 GLDEAAIRSLNGARVAEMLLSLVPDPAVFRVALRAVKRWARCKGLYSNVLGLLGGVNCAI 257
Query: 232 LVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPI---------QYQAMPHHVWDP 282
L A VCQ YPNA P+ +V RFF+IF W WPNPV++ + A + W+P
Sbjct: 258 LAAFVCQRYPNAAPSTVVGRFFRIFDGWDWPNPVLIAAPGAPPSSAGDESVASRYAAWNP 317
Query: 283 RSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIE---------- 332
R N RDR HL PI+TP++P NSSYNV + LR +++E + E +E
Sbjct: 318 RLNPRDRAHLAPIVTPAHPTMNSSYNVGAPQLRAIKDELSKGLETTRRVEKLAAHWRADE 377
Query: 333 --AGKR------TWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHM 384
G R W LF P FF ++Y+Q+ ++A + R+W W ESRLR L+
Sbjct: 378 SPTGDRAADLRDAWRRLFAPSDFFARHRHYVQVDVSAADDAGLRKWNAWCESRLRNLV-- 435
Query: 385 IERDMGGVLQCR 396
+ D G ++ R
Sbjct: 436 VALDTPGYVRAR 447
>gi|167536365|ref|XP_001749854.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771569|gb|EDQ85233.1| predicted protein [Monosiga brevicollis MX1]
Length = 604
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 170/541 (31%), Positives = 278/541 (51%), Gaps = 71/541 (13%)
Query: 17 TKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKL 76
TK LE L E + ++E R VL +L+ +V+ W+K+ + ++ +EE + +A+L
Sbjct: 4 TKALEAALEPEGVIDTDENMQQRCLVLSKLNELVQAWVKKASKEEYNFEEEAANQVDARL 63
Query: 77 FTFGSYRLGV----------------AGPSTDIDALCVGPCYATRHDDFFGKLFRMLQET 120
FTFGSYRLGV + + DID L P + R + FFG +++L+ET
Sbjct: 64 FTFGSYRLGVQSRYDMSSIQLFQMQFSRDAGDIDTLLCFPHHIKR-ESFFGTFYQLLKET 122
Query: 121 PLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQD-SLLHNLDEQTVL 179
P V DL A VPVIK +GV +DLL+A L + L SLQD LL + E ++
Sbjct: 123 PGVTDLHAAEGAFVPVIKLAMDGVELDLLFASLPVDRLEPTL-SLQDVDLLKKIHEDEIM 181
Query: 180 -SLNGCRVTDRILSLVP-NIRNFRSTLRCLRFWAKR-------------RGIYSNAMGFL 224
S+NGCRV D +L ++P N++ FR+ LR ++ WAK RG+YSN G+
Sbjct: 182 RSINGCRVADAVLEVMPSNLQTFRTALRAVKLWAKHNLTRSNQTVRTSGRGVYSNVHGYF 241
Query: 225 GGINWALLVARVCQLYPNALPNVLVSRFFKIFAHW-----------------KWPN-PVM 266
GGI+ +LV R+CQLYPNA + ++ +FF++++ W +W N P+
Sbjct: 242 GGIHLVILVTRICQLYPNAAASTILCKFFRVYSDWYGSNWIKHAREIWLAHGEWMNSPIK 301
Query: 267 LCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKE 326
+ + + WDPRSN RDR LMPIITP YP N+++NV+ +TL + EF R
Sbjct: 302 IKDVDDLHLGKRQWDPRSNPRDRYDLMPIITPVYPQQNAAFNVNESTLHRIVTEFSRGHR 361
Query: 327 LCEEI--EAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHM 384
+C++I + W ++EP FF ++ ++++ +A D +++G VES +R L+
Sbjct: 362 VCQDIMRASSNVPWSAVWEPIRFFDEYQYFVRVVASAATESDRTEFEGLVESTVRHLVLN 421
Query: 385 IERDMGGVLQCRLYPGDFSENSVKSSS---------QCHYFMGLG---RKQGVSPQDGEK 432
++ V YP + E+ V + +++ L +++G K
Sbjct: 422 LQY-TDNVAYAMAYPKAYHEDPVADKDGTEATTGPWRTAWYLALEFGIKQEGRIEPAPSK 480
Query: 433 FDMRLTVEEF----KSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKK 488
D++ + F + V M + M + V ++ +P +++PGGV P + + +K
Sbjct: 481 LDLQGPLVAFYGRLRDRTVTMSRYDETTMNVDVQAMKQSKLPGYLYPGGVNPHRKVRLRK 540
Query: 489 R 489
R
Sbjct: 541 R 541
>gi|269859597|ref|XP_002649523.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
gi|220067074|gb|EED44542.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
Length = 473
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 152/420 (36%), Positives = 238/420 (56%), Gaps = 20/420 (4%)
Query: 6 TSAPTVLDVISTKELEK------ILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTM 59
+ P LD + LEK L + F SEE++ R LGRL ++K ++++ ++
Sbjct: 12 VTGPATLDSSTKDSLEKSKILINFLKENDFFESEEDAKTRERALGRLSFLLKKFVRQQSL 71
Query: 60 DKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE 119
KG + ++ + TFGSYRLGV DIDALCV P + +R D FF + L E
Sbjct: 72 SKG-----ETKDCGGIICTFGSYRLGVHDKGADIDALCVVPRHISRKD-FFNIFYNQLLE 125
Query: 120 TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVL 179
V +L+ V DA VPVIK + + +DL A++ V+ +LD L D+LL +DE+ +L
Sbjct: 126 DSNVTELSKVEDAYVPVIKMHYMDIPIDLTMARVNLPVVDSNLDLLNDTLLKTMDEKCIL 185
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
S+NG RVTD +L+L+PN F LR ++FWAKRR IY NA G+ GG+ +++ VAR+CQL
Sbjct: 186 SINGSRVTDSMLNLIPNKETFHMALRAIKFWAKRRYIYGNAYGYFGGVAFSISVARICQL 245
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
YPN +V ++F+ +++W WP P++L PI VWD + DR H MPIITP+
Sbjct: 246 YPNKSSYDIVCKYFEYYSNWTWPEPILLKPIVDHHYNLKVWDNQKYPADRYHKMPIITPA 305
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
YP S++NV +T ++ EF+R+ E+ ++ +F+ FF +K Y+ I +
Sbjct: 306 YPSMCSTHNVFQSTFDLICREFRRSTEIINN-SINSTDFLQIFDNTDFFRKYKLYINIKV 364
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGL 419
A + + W G+VES++R L E + ++ +P F ++ C++F+G+
Sbjct: 365 KA-DKESIKSWSGFVESKVRILCSKFEA-VESIVAAIPFPKPFIKDET-----CNFFIGI 417
>gi|378756776|gb|EHY66800.1| poly(A) polymerase [Nematocida sp. 1 ERTm2]
Length = 507
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 219/374 (58%), Gaps = 10/374 (2%)
Query: 18 KELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEAN-AKL 76
K++ + L + F E ES+ R VLG L +V +I MD +E I + +K+
Sbjct: 14 KKVVEYLQTKGFFEDENESIQRERVLGMLSNLVNKFI----MDIAKRNEIPIDSKSLSKI 69
Query: 77 FTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPV 136
FTFGSYRLGV DID LCV P + +R ++FF + L + +++ V + VP+
Sbjct: 70 FTFGSYRLGVHSSGADIDTLCVVPNFVSR-NEFFTVFYDELCSKSYITEISKVTNTFVPL 128
Query: 137 IKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPN 196
IKFK + +DL++A++ IP ++D L + LL ++ E+ +LSLNG RVTD IL+ VPN
Sbjct: 129 IKFKIKSIPIDLVFARMDLPSIPPNIDLLNNKLLKHMSEKCILSLNGNRVTDEILAQVPN 188
Query: 197 IRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIF 256
I F TLR +++WA++R +Y +A G++GG+ +AL VA+VCQ+YP+A + +FF++F
Sbjct: 189 IETFHKTLRFMKYWAQKRQVYGHAYGYMGGVAYALCVAKVCQMYPSADAFKTIEKFFEVF 248
Query: 257 AHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRI 316
+ W WP PV++ + VW+P+ N + MP+ITP YP S++N++++TL +
Sbjct: 249 SKWAWPQPVIIKEVPDCNYNLKVWNPKVNVHHKNDKMPVITPVYPPLCSTHNITTSTLFV 308
Query: 317 MQEEFQRAKELCEEIEAGK----RTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKG 372
M+ EFQR + E K + L E FF K Y I +A N+ +F ++ G
Sbjct: 309 MKREFQRGTAIFAESLQNKTEPFKVLDELCEDTDFFTRHKTYFMIAMACDNSKEFGRFMG 368
Query: 373 WVESRLRQLIHMIE 386
+ E+R+R +E
Sbjct: 369 FAETRVRMFAQKLE 382
>gi|170061473|ref|XP_001866247.1| poly a polymerase [Culex quinquefasciatus]
gi|167879711|gb|EDS43094.1| poly a polymerase [Culex quinquefasciatus]
Length = 554
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/384 (39%), Positives = 217/384 (56%), Gaps = 32/384 (8%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D T EL+K L +F E + R+E+L +L+ +VK W++ V++ K +
Sbjct: 185 ISLAEPKKEDHTKTVELQKALEPYNVFEDESKLNHRMEILSKLNTLVKQWVRNVSISKNM 244
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ K++TFGSYRL V T+IDALCV P R D +FG F +L++ P
Sbjct: 245 P-EVLAEKLGGKIYTFGSYRLSVNHKGTNIDALCVAPRNIERQD-YFGSFFELLKKQP-- 300
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ V +A VPV+K KF+G+ +DLL+A+L IP+ D +D LL NLD + V SLNG
Sbjct: 301 -EYRAVEEALVPVVKMKFDGIKIDLLFARLALKEIPDKFDLREDMLLKNLDPKLVRSLNG 359
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CR TD IL VPNI NFR L + GIYSN++G+ GG++WA+LVAR CQL N
Sbjct: 360 CRATDEILRPVPNIDNFRLAL--------QHGIYSNSLGYFGGVSWAMLVARTCQLL-NV 410
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ V + F +F+ WK Q + +WDPR N + + HLM IITP+YP
Sbjct: 411 VAATQVHKCFLVFSRWKL----------RQNLGFQLWDPRVNVQGQFHLMSIITPAYPQQ 460
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS+++VS +T ++M EF R ++ +EI K W L + + + N
Sbjct: 461 NSTFHVSRSTRKVMLNEFNRGMQITDEIMLDKAGWDKLIATLSY--------STLVTSNN 512
Query: 364 AGDFRQWKGWVESRLRQLIHMIER 387
D +W G VES++R LI +ER
Sbjct: 513 TDDHLEWCGLVESKIRYLIQNLER 536
>gi|297829196|ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
gi|297328320|gb|EFH58739.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
Length = 507
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 155/411 (37%), Positives = 225/411 (54%), Gaps = 21/411 (5%)
Query: 9 PTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQ 68
P ++ S+ L +++V+E L S E+ R V+ +L IV W+K V + + Q
Sbjct: 12 PPSMEDGSSISLRQLMVNEGLIPSLEDQEKRRVVINKLRKIVVRWVKNVAWQHRLP-QNQ 70
Query: 69 IQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTP 128
I NA + +GSY LGV G +DIDALC+GP +A+ +DFF L ML+ V ++
Sbjct: 71 IDATNATILPYGSYGLGVYGSESDIDALCIGPFFASISEDFFISLRDMLKSRREVSEVHC 130
Query: 129 VPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTD 188
V DA+VP+I+FKF+G+ VDL YAQL+ IP ++D L L ++DE + SL+G R
Sbjct: 131 VKDAKVPLIRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKSLSGVRANK 190
Query: 189 RILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVL 248
IL LVP++ F+S LRC++ WAKRRG+Y N GFLGG++ A+L A VC NA + L
Sbjct: 191 CILQLVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYESNATLSSL 250
Query: 249 VSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSY- 307
++ FF IFAHW+WP PV+L Y A LMPI PC + Y
Sbjct: 251 LANFFYIFAHWQWPTPVVLLEDTYPATGAP-----------PGLMPI---QLPCGSHQYC 296
Query: 308 --NVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAG 365
N++ +T + EF R L ++ +W LFE Y + ++ + +IH++A N
Sbjct: 297 NSNITRSTFYKIMAEFLRGHNLTKDYLKPNFSWKNLFELYPYENTYTWFTKIHLSAANQE 356
Query: 366 DFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYF 416
D W GWV+SR R L+ IE G C P ++ E K + Y+
Sbjct: 357 DLSDWVGWVKSRFRCLLSKIEEVYG---ICDPNPTEYVETYTKQPNIVFYW 404
>gi|224099105|ref|XP_002311376.1| predicted protein [Populus trichocarpa]
gi|222851196|gb|EEE88743.1| predicted protein [Populus trichocarpa]
Length = 483
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/407 (37%), Positives = 231/407 (56%), Gaps = 25/407 (6%)
Query: 24 LVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYR 83
+V+E LF S EE R ++ +L IV W K+V + + ++QI +A + T+GSY
Sbjct: 1 MVNEGLFPSPEEDEKRKIIVEKLKTIVVAWAKKVAWQRCLP-KQQIAATSATILTYGSYG 59
Query: 84 LGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNG 143
LG P +DIDALCVGP +AT +DFF L +L+ P + ++ V D++VP+++F F+G
Sbjct: 60 LGFHDPESDIDALCVGPFFATIAEDFFIVLHNILKSRPEISEIHCVKDSKVPLMRFTFDG 119
Query: 144 VSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRST 203
+SVDL YAQL+ +PE++D L SLL N+DE + SL+G R RIL LVPN+ NF+S
Sbjct: 120 ISVDLPYAQLKVLNVPENVDILNLSLLTNIDETSWKSLSGVRANQRILLLVPNLMNFQSM 179
Query: 204 LRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPN 263
LRCL+ WAKRRG+Y N GFLGG++ A+L A VCQ PNA L+S FF +A W WP
Sbjct: 180 LRCLKLWAKRRGVYGNLNGFLGGVHLAVLAAFVCQNQPNASVIALISNFFSTYAMWPWPT 239
Query: 264 PVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQR 323
PVML M +V D + + MPI P P NV+ +T ++ EF R
Sbjct: 240 PVML----QDGMSSNVED----VIETRFYMPIRLPCSPYEYCHSNVTKSTFTKIRAEFLR 291
Query: 324 AKELCEEI-------EAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVES 376
+ ++ + G+ +FEP+ + ++ +++I+++A + + W GWV+S
Sbjct: 292 GHSMTRDLLKLKLDSDVGR-----IFEPFPYSTNYTRFVKIYLSAPDQDELGDWVGWVKS 346
Query: 377 RLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
R L+ +E G C P ++ + S ++ GL R +
Sbjct: 347 HFRCLLLKLEAVQGF---CDPNPMEYVDMDA-SEPNVVFYWGLNRSR 389
>gi|123495483|ref|XP_001326753.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909672|gb|EAY14530.1| hypothetical protein TVAG_388620 [Trichomonas vaginalis G3]
Length = 494
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 148/476 (31%), Positives = 249/476 (52%), Gaps = 7/476 (1%)
Query: 5 STSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGIS 64
+ PT ++ ++ EL++ + A+EE+ R EVL ++ ++ +++ R+ K +
Sbjct: 13 TEEGPTGAELQASIELQRFIDKYDAPATEEQKTKRQEVLSKIKILINEFV-RIIAKKTGN 71
Query: 65 DEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVE 124
E ++ ++L +GSYRLGV +DID + V P + R DFF + M+ P V+
Sbjct: 72 TAEGLENVESQLVPYGSYRLGVVSEGSDIDCIVVAPSFVKR-SDFFNTFYEMMINHPSVK 130
Query: 125 DLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGC 184
+L V +A P++ F ++G+ +DL +A L + + ED D D +L N+DE++V SLNG
Sbjct: 131 ELVKVENAYSPIMSFHYDGIEIDLSFASLAMTTVAEDTDFADDHILDNVDEESVRSLNGR 190
Query: 185 RVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNAL 244
RV D +L LVPN FR LR LR WAK+R +Y N G+LGG+N A+L A +CQ YP
Sbjct: 191 RVNDMLLQLVPNQDIFRVVLRFLRIWAKKRCVYGNVFGYLGGVNLAILAAFICQRYPKKS 250
Query: 245 PNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTN 304
P ++ FF A W WP P+ + + WDP + Q+D K MPIITP+YP N
Sbjct: 251 PAYIIVMFFNDLATWTWPEPIYINTPTTGNRSN--WDP-TRQQDHKDCMPIITPAYPTIN 307
Query: 305 SSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNA 364
S ++ + ++ M EF+R ++ + +W + + FF + ++++ + A
Sbjct: 308 SLHSATKSSRNRMTVEFKRGFKVASACLKSEASWERIIDSPKFFVRHRKFVEVLVVATEE 367
Query: 365 GDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQG 424
+ ++ +V+SR+R L IE + V ++P +F N + + C F +G
Sbjct: 368 KVYTEFMKFVQSRVRFLAINIETQLRHVSHAYIWPVEFPANGYRGNEFCSVFY-IGLSYH 426
Query: 425 VSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRP 480
V + + + LT K V + + + + +D+P F+FP G RP
Sbjct: 427 VPKDENQSRTLDLT-SPAKKWVDDIRQKAPPNADVILDVVDTKDLPSFLFPNGERP 481
>gi|397574427|gb|EJK49202.1| hypothetical protein THAOC_31949 [Thalassiosira oceanica]
Length = 843
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 186/613 (30%), Positives = 292/613 (47%), Gaps = 81/613 (13%)
Query: 1 MEIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMD 60
+ I+ S+PT ++ L+K + S E R VL ++ + ++W++ V +
Sbjct: 19 LPIVDGSSPTPAELSFQSTLQKFVDANVSLESSEGIKTRERVLVQMGRLHREWVRSVAIK 78
Query: 61 KGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGK-------- 112
+G+S + A +L+T GSYRLGV P DID + V P + +R DDFFG
Sbjct: 79 RGLS-PDAADSAGGELYTSGSYRLGVHEPGADIDTIAVAPSFCSR-DDFFGSNYVPPGDA 136
Query: 113 -----------------LFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQF 155
L ++ P V + PV +A VP++ F + G+++DLL+A+L
Sbjct: 137 MDEGDDEDGEQARDPDSLAERIRRQPHVTNFVPVENAAVPILTFDWEGINIDLLFARLST 196
Query: 156 SVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNI----RNFRSTLRCLRFWA 211
S IP + D D +L +D T SLNG RVT+ I +LV + F + +R +R WA
Sbjct: 197 SSIPRNFDIDNDLVLSGVDAATEKSLNGPRVTNLIAALVGGTEQRYQTFLTVVRLVRKWA 256
Query: 212 KRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQ 271
K RG+YSN MG+ GG+N + VA V QLYPNA P + +FF +F W+WPNPVML
Sbjct: 257 KNRGLYSNKMGYWGGVNINMAVALVLQLYPNACPASALRKFFLVFKSWRWPNPVMLTRPH 316
Query: 272 YQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCE-- 329
+ VW+ R+ + P+ITP+YP NS+ +VS TL+I+ EEF R + +
Sbjct: 317 DAELGLQVWNSHQAANMRQ-VAPMITPAYPAMNSTLSVSRQTLQILHEEFCRGHGIVDKL 375
Query: 330 ------------EIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESR 377
++E+G W LFEP FF ++ YL + I D + W G+VESR
Sbjct: 376 YKDYQRGAIDPADVESGG-MWGELFEPSDFFIAYPYYLSLCITGPTLHDAQAWAGFVESR 434
Query: 378 LRQLI-HMIERDMGGVLQCRLYPGDFSE---------NSVKSSSQCHYFMGLGRKQGVSP 427
LR+L+ M+ R + + + +L+P F + ++ YF+G R +
Sbjct: 435 LRKLVSDMLGRSL-PLSKIQLWPKKFDVCCADKTALLTHAQRANSITYFIGF-RVDKLRM 492
Query: 428 QDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPG--------GVR 479
+ GE+ D+ + F+ + + GM I +++P F G ++
Sbjct: 493 R-GEQLDIERQLSNFRKFELGRFHPLVPGMDILPKSFGVKELPTICFDGTYEGGKLAAMK 551
Query: 480 PPKSLNEKKRKRIEV------------IESTKLKKSESSTAGHSSGQKSSQTESGVALDG 527
++L E KRIE +E + KK E++ A + + E + L
Sbjct: 552 RRRALIEADPKRIEAKKKKKLAKLKRKMEEIQRKKREAAAA-KTEVVDEKEDEGDIVLGA 610
Query: 528 SHGLKSGPSVEPS 540
G K VE S
Sbjct: 611 HEGDKPAEEVEHS 623
>gi|295664146|ref|XP_002792625.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278739|gb|EEH34305.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 590
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/387 (37%), Positives = 216/387 (55%), Gaps = 37/387 (9%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT ++ + +L L + F S E+ R + L + + +++K V+ KG+
Sbjct: 15 ISTALPTTSEIAANDDLTTELKQQNNFESPSETERRKQTLHLIQRVTVEFVKVVSRRKGL 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF--FGKLFRMLQETP 121
S + I A K+FT+GSYRLGV GP +DID L VGP + + D F F L +
Sbjct: 75 S-QAAIDIAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFEDFFSDFPPLLEQMAPKG 133
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
+E LTPVPDA VP+IK + +G+S+DL+YA+L +P +LD LL LDE+ + +
Sbjct: 134 AIEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNKDLLRGLDEKEIRCV 193
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NG RVTD IL LVP + FR LR ++ WA+RR IYSN +GF GG+ WA+LVAR
Sbjct: 194 NGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVAR------ 247
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
P+ P+Q + VW+P+ DR HLMPIITP+YP
Sbjct: 248 ----------------------PIEEGPLQMK-----VWNPKIYHGDRYHLMPIITPAYP 280
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHIA 360
+++NVS +T ++ E +R ++ ++I G+ TW LF + FF +K YL I +
Sbjct: 281 SMCATHNVSLSTKAVLLRELKRGGDIVDKIFLGQLTWNDLFTRHTFFSQDYKYYLSITSS 340
Query: 361 AKNAGDFRQWKGWVESRLRQLIHMIER 387
++ W G VES+LR L+ ++R
Sbjct: 341 SRGKEAQSVWSGLVESKLRHLVGALDR 367
>gi|357112525|ref|XP_003558059.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 537
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 148/375 (39%), Positives = 215/375 (57%), Gaps = 15/375 (4%)
Query: 12 LDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQE 71
+DV+ + L K + + S+EE R EV+ LD IV DW K+V D+ D+ I
Sbjct: 71 MDVVRSVSLLKFIAGAGVVPSQEEEQRREEVVRELDKIVMDWAKQVAYDQ--RDKHWI-- 126
Query: 72 ANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPD 131
+ TFGSY LG GP +DIDA+CVGPC A+ FF L +ML+E P V DL +
Sbjct: 127 TTGTVLTFGSYALGAYGPESDIDAVCVGPCVASLQHHFFVVLRQMLEERPEVSDLHSIES 186
Query: 132 ARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRIL 191
ARVP+++FKFNGVSVD Y QL E + + LL +D + L+G RV +I+
Sbjct: 187 ARVPLMRFKFNGVSVDFPYVQLPVINAAEAIRAFDPRLLEKVDGASWRCLSGVRVNRQIM 246
Query: 192 SLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSR 251
LVPN++ F+ LRCL+ WA++RGIY + +G+ GI+ A+L A VC+ +PNA N L S
Sbjct: 247 QLVPNMKRFQVLLRCLKLWARKRGIYCHLVGYFAGIHLAVLGAYVCRRHPNASVNTLFSM 306
Query: 252 FFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSS 311
FF IF+HW WP PV L + P +W P D LMPI+ P +P + +++
Sbjct: 307 FFDIFSHWPWPLPVAL----HDQAP--LWGP-----DGCSLMPIVMPCFPPEFCASSITK 355
Query: 312 TTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWK 371
+T ++EE +R L ++I W +F PY + ++++L + ++A + R W
Sbjct: 356 STFNKIKEELRRGFALTKDIRNVDIDWTWIFAPYPYTVKYEHFLHMVLSAPTTEELRDWV 415
Query: 372 GWVESRLRQLIHMIE 386
GWV+SR R LI +E
Sbjct: 416 GWVKSRFRNLILKLE 430
>gi|55726267|emb|CAH89905.1| hypothetical protein [Pongo abelii]
Length = 304
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 141/280 (50%), Positives = 187/280 (66%), Gaps = 2/280 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE RV +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRVLILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPR 283
+ + LV +FF +F+ W+WPNPV+L + + VWDPR
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|294948934|ref|XP_002785968.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900076|gb|EER17764.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 436
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 229/397 (57%), Gaps = 27/397 (6%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + PT D +T+EL + + S L R EVL ++ +V WI V+
Sbjct: 41 VSENYPTRADYEATEELRHFIENRAPPESSHGMLKRYEVLVEIERMVNKWIYDVSAG--- 97
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFR-MLQETPL 122
+IQ + A++ TFGS+RLGV P +DID L + P +R DDFF ML +P
Sbjct: 98 ----EIQ-SKARVLTFGSFRLGVITPMSDIDTLVLLPNSISR-DDFFTDFVETMLNRSPH 151
Query: 123 VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLN 182
V + PVP A VP+IK K+ G+ +D+L A + V+ D+DS+Q+ L+++++++ + S+N
Sbjct: 152 VTECNPVPAAHVPIIKVKYRGICMDILAACVPTHVLSGDVDSVQEELIYDVEKRCMKSMN 211
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
G RV D++LSLV + + FR R +++WA++R IYSNA+G++GG++WA++V RVCQLYPN
Sbjct: 212 GIRVADKMLSLVVDTQTFRLATRVIKYWAQQRLIYSNAIGYMGGVSWAVMVGRVCQLYPN 271
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
+V RFF ++A W+W + + R DR H+MP+ITP +P
Sbjct: 272 YSAKQIVERFFFVYARWQW--------TATRDYGNSNAPRRRYTSDRHHVMPVITPIFPT 323
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKR---------TWITLFEPYHFFGSFKN 353
N++YNV + R++ E +R +E+ E + K TW L P+ FF ++
Sbjct: 324 HNTTYNVQESNKRVIVREIKRGREIMELMSMNKSSGATKGNEVTWADLCAPFPFFQVYRQ 383
Query: 354 YLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMG 390
+L + I+A+ F ++KG VESR+R L+ +E G
Sbjct: 384 FLLLEISAETEKAFLKFKGLVESRIRVLVKNLETCCG 420
>gi|119602052|gb|EAW81646.1| poly(A) polymerase alpha, isoform CRA_d [Homo sapiens]
Length = 317
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 140/280 (50%), Positives = 187/280 (66%), Gaps = 2/280 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPR 283
+ + LV +FF +F+ W+WPNPV+L + + VWDPR
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|123480837|ref|XP_001323419.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121906284|gb|EAY11196.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 508
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 152/478 (31%), Positives = 259/478 (54%), Gaps = 16/478 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + PT +D+ ++++L + L A E R V + IV +I++V ++K +
Sbjct: 21 VSEAEPTPIDIEASRKLVEFLDSAGAIADAEAMKHRQAVFETVSKIVDQFIEKVRVNKKM 80
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E + KLF GSY+LGV P +DID + + P + + ++FF + +L V
Sbjct: 81 EPPEG-EVYKGKLFYSGSYKLGVCSPKSDIDCVILAPQFVQK-EEFFSIFYELLAADTKV 138
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ L V +A VP+IK ++ + D+ +A L + I +D+D DS+L NL + +V +LN
Sbjct: 139 KGLIKVEEAYVPIIKLTYDDIEFDISFAALGLNNITDDIDLSPDSVLENLSKLSVRALNS 198
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RV + ++ LVPN+ NF++ L+ +R+WA +RG+Y N G+ GG+N A+L A VCQ YP A
Sbjct: 199 LRVNNMVIKLVPNLDNFKTLLKFVRYWAFKRGLYGNVYGYFGGVNLAILSAFVCQRYPTA 258
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
P +L FF + W WP P+ + Y + WDP + + D +MPIITP+YP T
Sbjct: 259 SPAMLALYFFSEISQWTWPTPIYINRPNYGELLS--WDP-TTESDHNDVMPIITPAYPST 315
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
NS + ++++ + +E +A ++ I G W + E + FF S+KNY++I I A+
Sbjct: 316 NSQRSATTSSRNRIIQEMVKALQIMPNIITGDLPWSAVCEDHEFFESYKNYIEIDIRAEG 375
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFS-ENSVKSSSQCHYFMGLGRK 422
D+ WKG V S++++LI +E + V ++P F EN+ K Q F+GL
Sbjct: 376 LADYNWWKGTVISKVKRLITSLEA-IERVKCAPIFPSSFDRENNNK--YQGSIFIGL-ET 431
Query: 423 QGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSH---LRCQDIPDFVFPGG 477
+ +G+K + ++++ + Y + + + + + + IPDF FP G
Sbjct: 432 EKTKDDEGKKVNPSAAIKKYLEEI---YKLTNRPLSTKIENPQVINRKKIPDFCFPNG 486
>gi|215768734|dbj|BAH00963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 546
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 143/374 (38%), Positives = 208/374 (55%), Gaps = 15/374 (4%)
Query: 13 DVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEA 72
D +K L + + S EE L R V+ LD IV W KRV D+ EQ
Sbjct: 78 DAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAKRVAYDQ----REQYWNT 133
Query: 73 NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDA 132
A + TFGSY LG GP +DIDA+CVGPC A+ FF L +ML+E P V DL + +A
Sbjct: 134 TATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVSDLHSIENA 193
Query: 133 RVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILS 192
+VP+++FKFNG+ VD Y QL E + + LL ++E + L+G RV +I+
Sbjct: 194 KVPLMRFKFNGMLVDFPYVQLPVINAAEAIHAFDPRLLAAVNEPSWRCLSGVRVNRQIMQ 253
Query: 193 LVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRF 252
L+PNI+ F+ LRCL+ WA++RG++ + +GF GI+ A+L A VC ++P+A + L + F
Sbjct: 254 LLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHATLSSLFNSF 313
Query: 253 FKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSST 312
F IF+HW WP PV L Q P W P MPI+ P P + +++ +
Sbjct: 314 FDIFSHWHWPLPVSLLD---QPTP---WRPHCCS-----FMPIVMPCSPPEFCASSITRS 362
Query: 313 TLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKG 372
T ++EE QR L + G W LF P+ + +K++L+I ++A A + R W G
Sbjct: 363 TFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELRDWVG 422
Query: 373 WVESRLRQLIHMIE 386
WV+SR R L+ +E
Sbjct: 423 WVKSRFRNLLLKLE 436
>gi|187469283|gb|AAI67010.1| Papola protein [Rattus norvegicus]
Length = 317
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 140/280 (50%), Positives = 187/280 (66%), Gaps = 2/280 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPR 283
+ + LV +FF +F+ W+WPNPV+L + + VWDPR
Sbjct: 264 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|294948940|ref|XP_002785971.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900079|gb|EER17767.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 505
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 229/397 (57%), Gaps = 27/397 (6%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + PT D +T+EL + + S L R EVL ++ +V WI V+
Sbjct: 41 VSENYPTRADYEATEELRHFIENRAPPESSHGMLKRYEVLVEIERMVNKWIYDVSAG--- 97
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFR-MLQETPL 122
+IQ + A++ TFGS+RLGV P +DID L + P +R DDFF ML +P
Sbjct: 98 ----EIQ-SKARVLTFGSFRLGVITPMSDIDTLVLLPNSISR-DDFFTDFVETMLNRSPH 151
Query: 123 VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLN 182
V + PVP A VP+IK K+ G+ +D+L A + V+ D+DS+Q+ L+++++++ + S+N
Sbjct: 152 VTECNPVPAAHVPIIKVKYRGICMDILAACVPTHVLSGDVDSVQEELIYDVEKRCMKSMN 211
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
G RV D++LSLV + + FR R +++WA++R IYSNA+G++GG++WA++V RVCQLYPN
Sbjct: 212 GIRVADKMLSLVVDTQTFRLATRVIKYWAQQRLIYSNAIGYMGGVSWAVMVGRVCQLYPN 271
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
+V RFF ++A W+W + + R DR H+MP+ITP +P
Sbjct: 272 YSAKQIVERFFFVYARWQW--------TATRDYGNSNVPLRRYTSDRHHVMPVITPIFPT 323
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKR---------TWITLFEPYHFFGSFKN 353
N++YNV + R++ E +R +E+ E + K TW L P+ FF ++
Sbjct: 324 HNTTYNVQESNKRVIVREIKRGREIMELMSMNKSSGATKGNEVTWADLCAPFPFFQVYRQ 383
Query: 354 YLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMG 390
+L + I+A+ F ++KG VESR+R L+ +E G
Sbjct: 384 FLLLEISAETEKAFLKFKGLVESRIRVLVKNLETCCG 420
>gi|224001714|ref|XP_002290529.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973951|gb|EED92281.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 367
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 142/362 (39%), Positives = 210/362 (58%), Gaps = 22/362 (6%)
Query: 39 RVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCV 98
R VL ++ ++++W+K V + KG+ + + ++ A +LFT GSYRLGV P DID + V
Sbjct: 10 RERVLVKMGNLMREWVKGVAVKKGL-NRDAVEGAGGELFTSGSYRLGVHEPGADIDTIAV 68
Query: 99 GPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVI 158
P TR +DFF L ++ P V + PV +A VP++ F + G+++DLL+A+L S +
Sbjct: 69 APNICTR-EDFFDSLAERIRRHPDVTNFVPVENAAVPILTFDWEGINIDLLFARLNASSV 127
Query: 159 PEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNI----RNFRSTLRCLRFWAKRR 214
P D D D +L +D T SLNG RVT+ I +LV + F + +R +R WAK R
Sbjct: 128 PRDFDIDNDLVLSGVDSATEKSLNGPRVTNLIAALVSGTDERYQTFLTVVRLVRKWAKAR 187
Query: 215 GIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA 274
G+YSN MG+ GG+N + VA V QLYPNA P L+ +FF +F W+WPNPVML
Sbjct: 188 GLYSNKMGYWGGVNINIAVALVLQLYPNACPASLLRKFFLVFKSWRWPNPVMLTKPHDAE 247
Query: 275 MPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELC------ 328
+ VW+ + + + P++TP+YP NS+ +VS TL+I+ EEF R +
Sbjct: 248 LGLPVWN-SFQAANMRQVAPMVTPAYPAMNSTLSVSRQTLQILHEEFCRGHNVVDKLYKD 306
Query: 329 --------EEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQ 380
++IE+G W LFEP FF + YL + I + D + W G+VESRLR+
Sbjct: 307 FQKGALDKDKIESGD-IWKELFEPSDFFIGYPYYLSLCIVGPSQADAQAWAGFVESRLRK 365
Query: 381 LI 382
L+
Sbjct: 366 LV 367
>gi|238583172|ref|XP_002390161.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
gi|215453244|gb|EEB91091.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
Length = 309
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 181/280 (64%), Gaps = 2/280 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ T + T+ L + L + F SEEE+ R VLGR+ +VK ++K+V M +G+
Sbjct: 8 ISTAESTEREKEVTESLMEELRQQGTFESEEEAQTRELVLGRVSALVKKFVKKVGMARGL 67
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E A K+FTFGSYRLGV GPS+DID LCV P + R +DFF ML+E
Sbjct: 68 S-EAAATAAGGKIFTFGSYRLGVHGPSSDIDTLCVVPKHVQR-EDFFEVFEPMLREFEGA 125
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
++ VP+A VP+I +G+ +D L A+L S IPEDL D+LL N+DE+ V SL G
Sbjct: 126 TEVAGVPEAYVPIITANISGIPLDFLMARLALSSIPEDLSLQDDNLLRNIDERCVRSLGG 185
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RV + IL LVPN++ FR +LRC++ WA+RR IYSN GF GG+ WA++VAR+CQLYPNA
Sbjct: 186 SRVANEILRLVPNVQVFRDSLRCIKLWAQRRAIYSNVNGFFGGVAWAMVVARICQLYPNA 245
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPR 283
+ +VSRFF I W WP PV+L I+ + VW+P+
Sbjct: 246 IAGAIVSRFFIIMYQWTWPQPVLLKQIEEGPLQVRVWNPK 285
>gi|1377872|gb|AAC52609.1| poly(A) polymerase V, partial [Mus musculus]
Length = 303
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 140/280 (50%), Positives = 187/280 (66%), Gaps = 2/280 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 12 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 71
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 72 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 129
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 130 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 189
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 190 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 249
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPR 283
+ + LV +FF +F+ W+WPNPV+L + + VWDPR
Sbjct: 250 IASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 289
>gi|145338191|ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana]
gi|62320636|dbj|BAD95301.1| poly(A) polymerase [Arabidopsis thaliana]
gi|332640894|gb|AEE74415.1| poly(A) polymerase 3 [Arabidopsis thaliana]
Length = 507
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 158/423 (37%), Positives = 227/423 (53%), Gaps = 21/423 (4%)
Query: 16 STKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAK 75
S+ L +++V+E L S E+ + R V+ +L IV W+K V + + QI NA
Sbjct: 17 SSISLRQLMVNEGLIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLP-QNQIDATNAT 75
Query: 76 LFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVP 135
+ +GSY LGV G +DIDALC+GP +A+ +DFF L ML+ V +L V DA+VP
Sbjct: 76 ILPYGSYGLGVYGSESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKDAKVP 135
Query: 136 VIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVP 195
+I+FKF+G+ VDL YAQL+ IP ++D L L ++DE + L+G R IL LVP
Sbjct: 136 LIRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQLVP 195
Query: 196 NIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKI 255
++ F+S LRC++ WAKRRG+Y N GFLGG++ A+L A VC PNA + L++ FF
Sbjct: 196 SLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYT 255
Query: 256 FAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSY---NVSST 312
FAHW+WP PV+L Y P P LMPI PC + Y ++ +
Sbjct: 256 FAHWQWPTPVVLLEDTY---PSTGAPP--------GLMPI---QLPCGSHQYCNSTITRS 301
Query: 313 TLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKG 372
T + EF L ++ +W LFE Y + ++ + +IH++A N D W G
Sbjct: 302 TFYKIVAEFLLGHNLTKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVG 361
Query: 373 WVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEK 432
WV+SR R L+ IE G C P ++ E K + Y+ R VS + K
Sbjct: 362 WVKSRFRCLLIKIEEVYG---ICDPNPTEYVETYTKQPNIVFYWGLQLRTINVSDIESVK 418
Query: 433 FDM 435
D
Sbjct: 419 IDF 421
>gi|384485221|gb|EIE77401.1| hypothetical protein RO3G_02105 [Rhizopus delemar RA 99-880]
Length = 472
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 173/477 (36%), Positives = 259/477 (54%), Gaps = 57/477 (11%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S + PT ++ T +L K L + LF +++E+ R IVK+++ +V+ +G+
Sbjct: 15 VSLNKPTEHELKLTNDLLKTLHEYNLFETDKEAKQR---------IVKEFVYKVSKLQGL 65
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S E + A K+FTFGSY+LGV G DID LCV P + TR + FF +F ML E P V
Sbjct: 66 S-ESVARSAGGKIFTFGSYQLGVHGAGADIDTLCVFPQHVTR-EHFFSIMFNMLNELPEV 123
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+LT V +A VPVI+ F+G+ +D + A+L IPEDLD DSLL L+E+ V S++G
Sbjct: 124 TELTSVVEAYVPVIRMHFSGIPIDFVCARLLLPSIPEDLDLSDDSLLVGLEEKCVRSVSG 183
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RVT+ IL LVP++ FR +LR ++ WAK+RGIYSN MGFLGG+ WA+LVARVCQ+YPNA
Sbjct: 184 PRVTNEILRLVPSVSVFRESLRTIKLWAKKRGIYSNVMGFLGGVAWAMLVARVCQMYPNA 243
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+VSRFF I + W+WP PV+L P++ + D+ H MPIITP +P
Sbjct: 244 CTASIVSRFFHIMSKWEWPQPVLLKPMEEGPI---------YPADKAHRMPIITPGFPSM 294
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKN 363
+++NV+++T IM EF + + +A WI+ I+ K
Sbjct: 295 CATHNVTNSTRSIMMNEFLKISQ-----DAVTVVWIS-----------------RISNKT 332
Query: 364 AGDFRQWKGWVESRLRQLIHMIERDMGGVLQ---CRLYPGDFSE--NSVKSSSQCHYFMG 418
G + + W + L+H +G V C G E NSV +++G
Sbjct: 333 IGI--KEEQWYVANGYDLLHGRSFSLGNVSSEEDCMRKMGLTKEQRNSVTPVYTTTFYIG 390
Query: 419 LGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQG----MQIHVSHLRCQDIPD 471
L K+ S Q D+ +EF + + +W + M + + H++ +P+
Sbjct: 391 LKFKRPSSSQIERTVDLIWPKKEF----IKLVKTWDRYDSNIMSVTLKHVKSTCLPN 443
>gi|302499084|ref|XP_003011538.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
gi|291175090|gb|EFE30898.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
Length = 700
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/372 (38%), Positives = 211/372 (56%), Gaps = 41/372 (11%)
Query: 39 RVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCV 98
R + L L + ++IK V+ +KG+S + +G S DID L V
Sbjct: 73 RKQTLHLLQRVTIEFIKVVSKEKGLSQAA----------------IDASGGS-DIDTLVV 115
Query: 99 GPCYATRHDDFFGKLFRMLQE---TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQF 155
P + R +DFF +L++ +E +TPVPDA VP+IK + +G+S+DL++A+L
Sbjct: 116 APKHVMR-EDFFAHFPAVLEKHAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIV 174
Query: 156 SVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRG 215
S +P +LD LL LDE+ + +NG RVTD IL LVP + FR LR ++ WA+RR
Sbjct: 175 SSVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRA 234
Query: 216 IYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAM 275
IYSN +GF GG+ WA+LVARVCQLYP A +V+V +FF+I W WP PV+L I+ +
Sbjct: 235 IYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPL 294
Query: 276 PHHVWDPRSNQR-------------------DRKHLMPIITPSYPCTNSSYNVSSTTLRI 316
VW+P+ + DR HLMPIITP+YP +++NVS +T +
Sbjct: 295 HMKVWNPKVGSQLCFFIPKALTDFSFQIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAV 354
Query: 317 MQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS-FKNYLQIHIAAKNAGDFRQWKGWVE 375
+ E +R ++ ++I G+R W LF + FF + +K YL I+ + + W G VE
Sbjct: 355 ILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYLSINSTSTSKEAQAIWSGLVE 414
Query: 376 SRLRQLIHMIER 387
S+LR L+ ++R
Sbjct: 415 SKLRHLVGALDR 426
>gi|387594343|gb|EIJ89367.1| poly(A) polymerase [Nematocida parisii ERTm3]
gi|387596813|gb|EIJ94434.1| poly(A) polymerase [Nematocida parisii ERTm1]
Length = 506
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/440 (33%), Positives = 242/440 (55%), Gaps = 30/440 (6%)
Query: 29 LFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQI---QEANAKLFTFGSYRLG 85
F E ES+ R VLG+L +V +I MD I+ QI +++ +K+FTFGSYRLG
Sbjct: 25 FFEDESESIQRERVLGKLSNLVNKFI----MD--IAKRNQIPIDKKSLSKIFTFGSYRLG 78
Query: 86 VAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVS 145
V DID LCV P + +R ++FF + L + +++ V + VP+IKFK +
Sbjct: 79 VHSSGADIDTLCVVPNFVSR-NEFFTTFYDELCSKDYITEISKVTNTFVPLIKFKIKTIP 137
Query: 146 VDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLR 205
+DL++A++ I ++D L + LL ++ E+ +LSLNG RVTD IL+ VPNI F TLR
Sbjct: 138 IDLVFARVDLPSISPNIDLLNNKLLKHMSEKCILSLNGNRVTDEILAQVPNISTFHKTLR 197
Query: 206 CLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPV 265
+++WA++R +Y ++ G++GG+ +AL VA+VCQLYP A + +FF +F+ W WP PV
Sbjct: 198 FIKYWAQKRQVYGHSYGYMGGVAYALCVAKVCQLYPGADAFETIEKFFDVFSKWPWPQPV 257
Query: 266 MLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAK 325
++ + VW+P+ N + + MP+ITP YP S++N++++TL + ++EF R
Sbjct: 258 IIKEVPDCNYNLKVWNPKINPQHKNDKMPVITPVYPPLCSTHNITNSTLFVAKKEFLRGV 317
Query: 326 ELCEEIEAGK---RTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLI 382
+ E K + L E FF K Y I +A N +F ++ G+ E+R+R
Sbjct: 318 AIFSENADKKDPMKILDQLCEDADFFTRHKTYFMIALACDNPKEFSRFMGFAETRVRMFA 377
Query: 383 HMIERDMGGVLQCRLYPGDFSENSVKSSS-------QC--------HYFMGLGRKQGVSP 427
+E ++ + +P + V S + +C +F+G+ P
Sbjct: 378 QKLE-NIENIEYAYTFPKKYILEDVTSKNVPLLKELKCGDDSYAFGAFFIGIDFSTVKLP 436
Query: 428 QDG-EKFDMRLTVEEFKSHV 446
+ +K +++ V EFKS +
Sbjct: 437 LNASKKMNLKKPVLEFKSSL 456
>gi|302665415|ref|XP_003024318.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
gi|291188368|gb|EFE43707.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
Length = 599
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/373 (38%), Positives = 212/373 (56%), Gaps = 42/373 (11%)
Query: 39 RVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCV 98
R + L L + ++IK V+ +KG+S Q A + +G S DID L V
Sbjct: 73 RKQTLHLLQRVTIEFIKVVSKEKGLS-----QAA-----------IDASGGS-DIDTLVV 115
Query: 99 GPCYATRHDDFFGKLFRMLQE---TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQF 155
P + R +DFF +L++ +E +TPVPDA VP+IK + G+S+DL++A+L
Sbjct: 116 APKHVMR-EDFFAHFPAILEKHAPKDAIEKMTPVPDAFVPIIKIEIFGISIDLIFARLIV 174
Query: 156 SVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRG 215
S +P +LD LL LDE+ + +NG RVTD IL LVP + FR LR ++ WA+RR
Sbjct: 175 SSVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRA 234
Query: 216 IYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAM 275
IYSN +GF GG+ WA+LVARVCQLYP A +V+V +FF+I W WP PV+L I+ +
Sbjct: 235 IYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPL 294
Query: 276 PHHVWDPRSNQR--------------------DRKHLMPIITPSYPCTNSSYNVSSTTLR 315
VW+P+ + DR HLMPIITP+YP +++NVS +T
Sbjct: 295 HMKVWNPKVGSQLCFFFIPRALADFSFQIYHGDRFHLMPIITPAYPSMCATHNVSMSTKA 354
Query: 316 IMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS-FKNYLQIHIAAKNAGDFRQWKGWV 374
++ E +R ++ ++I G+R W LF + FF + +K YL I+ + + W G V
Sbjct: 355 VILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYLSINSTSTSKEAQAIWSGLV 414
Query: 375 ESRLRQLIHMIER 387
ES+LR L+ ++R
Sbjct: 415 ESKLRHLVGALDR 427
>gi|357115984|ref|XP_003559765.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 554
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/395 (35%), Positives = 218/395 (55%), Gaps = 18/395 (4%)
Query: 13 DVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEA 72
D + L + L +E + EE R +V+ +L IV DW K V ++ + +
Sbjct: 89 DFRRSHSLVQFLENEGAVPTVEEDKTREQVIRKLKEIVMDWAKVVAYEQRVPP----RRV 144
Query: 73 NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDA 132
A + T+GSY LG GP +DIDALCVGPC AT FF L ++L+ V + V +A
Sbjct: 145 TATVLTYGSYTLGAHGPESDIDALCVGPCIATLQHHFFVALRQILERRLEVSGMQTVENA 204
Query: 133 RVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILS 192
+VP+++F F+G+SVDL YAQL E +++ L LD ++ SL+G RV ++I+
Sbjct: 205 KVPLMRFTFSGISVDLTYAQLPVVDAVEAINTSSPQFLRRLDSRSWRSLSGVRVNEQIVQ 264
Query: 193 LVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRF 252
LVPN + F+ LR ++ WA+RRG++ + +GF GI+ A+L A +CQ YPNA N L + F
Sbjct: 265 LVPNAKKFQVLLRSIKLWARRRGLHCHLLGFFAGIHLAILAAYICQRYPNATANGLFTMF 324
Query: 253 FKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSST 312
F+IFAHW W PV L H P + +R + MPI+ P P N++
Sbjct: 325 FEIFAHWDWQIPVNL---------HG--QPTNCKRSDGYYMPIVMPCTPPELCMSNMTKC 373
Query: 313 TLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKG 372
T + ++EE R L +++ W LF P+ + ++ +L+I + + + + R W G
Sbjct: 374 TFKKIREELMRGYALTKDLWRHDFEWTWLFAPFPYATRYQQFLRIALCSPTSEELRDWTG 433
Query: 373 WVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSV 407
WV+SR RQLI +ER+ L+C Y + ++ V
Sbjct: 434 WVKSRFRQLILKLERNG---LECDPYSSEEVDHRV 465
>gi|32527644|gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 483
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 156/415 (37%), Positives = 222/415 (53%), Gaps = 21/415 (5%)
Query: 24 LVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYR 83
+V+E L S E+ + R V+ +L IV W+K V + + QI NA + +GSY
Sbjct: 1 MVNEGLIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLP-QNQIDATNATILPYGSYG 59
Query: 84 LGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNG 143
LGV G +DIDALC+GP +A+ +DFF L ML+ V +L V DA+VP+I+FKF+G
Sbjct: 60 LGVYGSESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKDAKVPLIRFKFDG 119
Query: 144 VSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRST 203
+ VDL YAQL+ IP ++D L L ++DE + SL+G R IL LVP++ F+S
Sbjct: 120 ILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKSLSGVRANKCILQLVPSLELFQSL 179
Query: 204 LRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPN 263
LRC++ WAKRRG+Y N GFLGG++ A+L A VC PNA + L++ FF FA W+WP
Sbjct: 180 LRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFALWQWPT 239
Query: 264 PVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSY---NVSSTTLRIMQEE 320
PV+L Y P P LMPI PC + Y ++ +T + E
Sbjct: 240 PVVLLEDTY---PSTGAPP--------GLMPI---QLPCGSHQYCNSTITRSTFYKIVAE 285
Query: 321 FQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQ 380
F L ++ +W LFE Y + ++ + +IH++A N D W GWV+SR R
Sbjct: 286 FLLGHNLTKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRC 345
Query: 381 LIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDM 435
L+ IE G C P ++ E K + Y+ R VS + K D
Sbjct: 346 LLIKIEEVYG---ICDPNPTEYVETYTKQPNIVFYWGLQLRTINVSDIESVKIDF 397
>gi|298710751|emb|CBJ32172.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 533
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/385 (37%), Positives = 209/385 (54%), Gaps = 33/385 (8%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E I+TSAP+ D+ +LE + D + + R +VLG++ + W+ ++
Sbjct: 30 EPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRAMFLQWVIDSALEA 89
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G+S EE + A K++T GSYRL + P++DIDA+CV P + T + FF L L P
Sbjct: 90 GMS-EEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCT-SELFFTTLKERLIAHP 147
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
LV ++ + A VP+I+ F+ + +DL A L +P LD D
Sbjct: 148 LVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQ------------- 194
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
VPN +F +RC+R WAK RG+YSN MG+LGG+N+ ++VA CQ+YP
Sbjct: 195 ------------VPNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYP 242
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
NA P+ L+ RFFK+ A W WPN + L + VW+ R+N H MPIITP+YP
Sbjct: 243 NAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARANSW---HCMPIITPAYP 299
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEI--EAGKRTWIT-LFEPYHFFGSFKNYLQIH 358
NSS NVS TL +M EF R E+ I E G + + LFEP FF + +YL +
Sbjct: 300 VMNSSANVSRFTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVD 359
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIH 383
+ A + + R W GWVESRLR++ +
Sbjct: 360 MMASSEDEHRAWVGWVESRLRKVTN 384
>gi|345490104|ref|XP_003426299.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Nasonia vitripennis]
Length = 383
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 218/374 (58%), Gaps = 18/374 (4%)
Query: 116 MLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDE 175
+L+ V+DL + +A V VIK F+G+ +D+L+A LQ + +P+ +D D LL LD+
Sbjct: 6 LLKSQKEVKDLRAIEEAFVXVIKMNFDGIEIDMLFAHLQGTKLPDPMDFTDDMLLKYLDQ 65
Query: 176 QTVLSLNGCRVTDRILSLVPNIRNFR-STLRCLRFWAKRRGIYSNAMGFLGGINWALLVA 234
+ V SLNGCRVT IL V N+ NFR +TL+ ++ AK GIYSN +G+LG ++WA+LVA
Sbjct: 66 KCVRSLNGCRVTKEILQSVSNLENFRLTTLKAIKLRAKNNGIYSNVLGYLGVVSWAILVA 125
Query: 235 RVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRK--HL 292
R CQLYPNA P L+ +FF IF+ W+WP PV+L ++ + VWDPR N DR HL
Sbjct: 126 RTCQLYPNAAPATLIEKFFLIFSIWEWPRPVLLKSVKKVNLGLQVWDPRVNASDRPPYHL 185
Query: 293 MPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFK 352
MPIITP+YP NS++NV+ +T IM+E + + ++I GK +W LFEP +FF K
Sbjct: 186 MPIITPAYPQQNSTFNVTISTRTIMEEAIKTVLAITKDIAMGKASWDKLFEPSNFFDEXK 245
Query: 353 NYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQ 412
+++ + ++ +W G++ES++R LI +R+ + + P F +
Sbjct: 246 HFVILSASSLTNKMSIEWSGFIESKIRHLIGSFDRN-PNITFAHINPKSFPPLKPEEDEH 304
Query: 413 -CHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHV------VWMYSSWKQGMQIHVSHLR 465
C + +GL ++ EK + LT + KS + V + +K GM ++R
Sbjct: 305 GCMWLIGLTFRK------AEKLSIDLT-SDIKSFIKTTEGQVKKSNLFKDGMSQEAKYVR 357
Query: 466 CQDIPDFVFPGGVR 479
+++ +++ ++
Sbjct: 358 RKNLSNYIAANQIK 371
>gi|348667211|gb|EGZ07037.1| hypothetical protein PHYSODRAFT_307061 [Phytophthora sojae]
Length = 1061
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/327 (41%), Positives = 199/327 (60%), Gaps = 2/327 (0%)
Query: 3 IISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKG 62
++ + ++D + + + D E + +++VL +L ++ W+K V ++
Sbjct: 453 VVESPMQPIMDPTALQSFVDYVDDISPMDVPEARMHKLQVLKQLSDLLTKWVKMVGRERE 512
Query: 63 ISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL 122
+S EE I LF GSYRLG+ P++DIDA+CV P + T HDDFF +L++TP
Sbjct: 513 LS-EEHIALTKGSLFLAGSYRLGLDDPNSDIDAVCVAPWHVT-HDDFFSSFCHLLEQTPG 570
Query: 123 VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLN 182
V L PVP+A VP+I F GV +DLL+A+L S + + + D +L + E ++ +LN
Sbjct: 571 VSHLAPVPNAYVPLISLSFLGVRMDLLFARLPVSSVEPNQNIDSDHMLVGVHETSMKALN 630
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
RV+ +L LVP R +R LR +R WA+RRGIYS +G+LGGI+WA+LVA VCQLYPN
Sbjct: 631 APRVSSMLLCLVPRRREYRIVLRAVRAWARRRGIYSAKLGYLGGISWAILVAFVCQLYPN 690
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
A P + RFF++ + W+WP PVML I + +WDPR + DR H+MPIITP+YP
Sbjct: 691 AEPAKIFVRFFQVLSEWQWPQPVMLNMIYDAGLGFDMWDPRQSVFDRSHIMPIITPAYPH 750
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCE 329
NSS VS T ++ EE RA+ L E
Sbjct: 751 MNSSVQVSQPTFSVIYEELWRARYLAE 777
>gi|294895248|ref|XP_002775109.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239881038|gb|EER06925.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 413
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/285 (45%), Positives = 177/285 (62%), Gaps = 6/285 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PTV D+ + + + L AS+E+ R + L L+G++ DW+ V + +G+
Sbjct: 22 ISEAGPTVADLKQNEGMLEFLTTAAPEASKEDREKREKALRVLEGVIGDWLTEVGVQQGM 81
Query: 64 SDEE-QIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL 122
+ E + Q N KLFTFGS+RLG+ PS+DID LCV P + TR + FFG L LQ+
Sbjct: 82 TAENARKQSNNGKLFTFGSHRLGLISPSSDIDCLCVAPRHVTR-EAFFGSLVGKLQQMDE 140
Query: 123 VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLN 182
VE +TPVPDA P+IK GV +DLL+A+L + D D LL NLD+++V +N
Sbjct: 141 VETVTPVPDAYAPIIKLVCCGVDIDLLFARLNLTSTSGLKDLQSDELLKNLDDRSVRCVN 200
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
G RV D IL LVP FR LR ++ WAKRRG+Y+N +GF GGI WA+LVARVCQ++PN
Sbjct: 201 GTRVADLILKLVPTPNTFRGCLRLIKLWAKRRGLYANIIGFFGGITWAILVARVCQMFPN 260
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA----MPHHVWDPR 283
LV RFF I + W W NPV LCPI+ + M VW+P+
Sbjct: 261 MQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPK 305
>gi|301111045|ref|XP_002904602.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
gi|262095919|gb|EEY53971.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
Length = 677
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 162/511 (31%), Positives = 254/511 (49%), Gaps = 52/511 (10%)
Query: 9 PTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQ 68
PT D+ ST L K + + E+ + + L +V W++R T+DK +D E
Sbjct: 150 PTEYDLRSTNGLTKCVNAIAPMPTAEQMSAKHLAINELQRVVDIWLRR-TLDKLATDSET 208
Query: 69 IQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTP 128
A L GS+ L V +D+D + P T + FF L L + V DL
Sbjct: 209 KSTETATLLLGGSWHLKVGNAESDLDVVAFMPHTVTA-EIFFSSLCEHLGQESSVSDLVA 267
Query: 129 VPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDL-----DSLQDSLLHNLDEQTVLSLN 182
A VPV+ F+ N V +DLL+A+ Q +P+ L D +Q ++ +D +V SL+
Sbjct: 268 RRKAAVPVLSFQLNSVRIDLLFARYAQQQAVPKHLPFLPGDDMQ--VMRGMDATSVRSLS 325
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
RV IL LVPN +RS LR +R WA+RRG+YSN GFLGGI+WA+LV VCQ++P
Sbjct: 326 VARVASLILELVPNASVYRSCLRVIRLWARRRGLYSNKAGFLGGISWAILVCFVCQMFPR 385
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLC-PIQYQAMPHHV-WDPRSNQRDRKHLMPIITPSY 300
A LV RFF + A W+WP P+++ P V WDP+ N DR HLMPIITP +
Sbjct: 386 ASVASLVHRFFSVLATWRWPTPILVAHPSNGGKTDQEVQWDPQHNIHDRAHLMPIITPGF 445
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIE----AGKRTWITLFEPYHFFGSFKNYLQ 356
P N++ NV+ +TLR+++EEF R + + +++ + +W LF P + +++
Sbjct: 446 PAVNTAVNVNISTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHHVA 505
Query: 357 IHIAAKNAGDFRQWKGWVESRLRQLIHMIERD--------MGGVLQCRLYPGDFSENSVK 408
I + A N +W +V SR R+L+ ++ + +++ + + D S+ V
Sbjct: 506 IELRAPNEEALAEWSSFVASRTRKLVETLQHTPSISALHPLPDLVRAQGHETDESDAVVG 565
Query: 409 SSSQCHYFMGLGRKQGVSPQDGEKFDMRLTV----------EEFKSHVVWMYSSW----- 453
++F+G +PQ + D R + EE + V + +
Sbjct: 566 -----YFFIGYTVNVPSTPQP-RRGDRRHSARSPVITKNSQEELAKNSVASATRYFLATE 619
Query: 454 -------KQGMQIHVSHLRCQDIPDFVFPGG 477
K GMQ+ +++ D+P +FPGG
Sbjct: 620 LNTAAEKKPGMQVDINYRSWNDLPSAIFPGG 650
>gi|301092990|ref|XP_002997344.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262110742|gb|EEY68794.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 677
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 162/511 (31%), Positives = 254/511 (49%), Gaps = 52/511 (10%)
Query: 9 PTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQ 68
PT D+ ST L K + + E+ + + L +V W++R T+DK +D E
Sbjct: 150 PTEYDLRSTNGLTKCVNAIAPMPTAEQMSAKHLAINELQRVVDIWLRR-TLDKLATDSET 208
Query: 69 IQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTP 128
A L GS+ L V +D+D + P T + FF L L + V DL
Sbjct: 209 KSTETATLLLGGSWHLKVGNAESDLDVVAFMPHTVTA-EIFFSSLCEHLGQESSVSDLVA 267
Query: 129 VPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDL-----DSLQDSLLHNLDEQTVLSLN 182
A VPV+ F+ N V +DLL+A+ Q +P+ L D +Q ++ +D +V SL+
Sbjct: 268 RRKAAVPVLSFQLNSVRIDLLFARYAQQQAVPKHLPFLPGDDMQ--VMRGMDATSVRSLS 325
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
RV IL LVPN +RS LR +R WA+RRG+YSN GFLGGI+WA+LV VCQ++P
Sbjct: 326 VARVASLILELVPNASVYRSCLRVIRLWARRRGLYSNKAGFLGGISWAILVCFVCQMFPR 385
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLC-PIQYQAMPHHV-WDPRSNQRDRKHLMPIITPSY 300
A LV RFF + A W+WP P+++ P V WDP+ N DR HLMPIITP +
Sbjct: 386 ASVASLVHRFFSVLATWRWPTPILVAHPSNGGKTDQEVQWDPQHNIHDRAHLMPIITPGF 445
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIE----AGKRTWITLFEPYHFFGSFKNYLQ 356
P N++ NV+ +TLR+++EEF R + + +++ + +W LF P + +++
Sbjct: 446 PAVNTAVNVNISTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHHVA 505
Query: 357 IHIAAKNAGDFRQWKGWVESRLRQLIHMIERD--------MGGVLQCRLYPGDFSENSVK 408
I + A N +W +V SR R+L+ ++ + +++ + + D S+ V
Sbjct: 506 IELRAPNEEALAEWSSFVASRTRKLVETLQHTPSISALHPLPDLVRAQGHETDESDAVVG 565
Query: 409 SSSQCHYFMGLGRKQGVSPQDGEKFDMRLTV----------EEFKSHVVWMYSSW----- 453
++F+G +PQ + D R + EE + V + +
Sbjct: 566 -----YFFIGYTVNVPPTPQP-RRGDRRHSARSPVITKNSQEELAKNSVASATRYFLATE 619
Query: 454 -------KQGMQIHVSHLRCQDIPDFVFPGG 477
K GMQ+ +++ D+P +FPGG
Sbjct: 620 LNTAAEKKPGMQVDINYRSWNDLPSAIFPGG 650
>gi|12322673|gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-39333 [Arabidopsis thaliana]
Length = 482
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 156/415 (37%), Positives = 221/415 (53%), Gaps = 22/415 (5%)
Query: 24 LVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYR 83
+V+E L S E+ + R V+ +L IV W+K V + + QI NA + +GSY
Sbjct: 1 MVNEGLIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLP-QNQIDATNATILPYGSYG 59
Query: 84 LGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNG 143
LGV G +DIDALC+GP +A+ D FF L ML+ V +L V DA+VP+I+FKF+G
Sbjct: 60 LGVYGSESDIDALCIGPFFASIAD-FFISLRDMLKSRREVSELHCVKDAKVPLIRFKFDG 118
Query: 144 VSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRST 203
+ VDL YAQL+ IP ++D L L ++DE + L+G R IL LVP++ F+S
Sbjct: 119 ILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQLVPSLELFQSL 178
Query: 204 LRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPN 263
LRC++ WAKRRG+Y N GFLGG++ A+L A VC PNA + L++ FF FAHW+WP
Sbjct: 179 LRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFAHWQWPT 238
Query: 264 PVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSY---NVSSTTLRIMQEE 320
PV+L Y P P LMPI PC + Y ++ +T + E
Sbjct: 239 PVVLLEDTY---PSTGAPP--------GLMPI---QLPCGSHQYCNSTITRSTFYKIVAE 284
Query: 321 FQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQ 380
F L ++ +W LFE Y + ++ + +IH++A N D W GWV+SR R
Sbjct: 285 FLLGHNLTKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRC 344
Query: 381 LIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDM 435
L+ IE G C P ++ E K + Y+ R VS + K D
Sbjct: 345 LLIKIEEVYG---ICDPNPTEYVETYTKQPNIVFYWGLQLRTINVSDIESVKIDF 396
>gi|301095250|ref|XP_002896726.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
gi|262108787|gb|EEY66839.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
Length = 343
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 138/326 (42%), Positives = 193/326 (59%), Gaps = 21/326 (6%)
Query: 165 LQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFL 224
L D +L +DE +V S NG RVT+RIL LVPN FR+TL ++ WA+ RGIYSN +GFL
Sbjct: 2 LDDQVLRGMDEASVRSCNGVRVTERILQLVPNQERFRTTLIAVKHWARIRGIYSNVLGFL 61
Query: 225 GGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA-MPHHVWDPR 283
GG+NWA+LVAR+CQ YPN+LP L+SRFF+I+ W WPNP+ML + + W+P+
Sbjct: 62 GGVNWAILVARICQFYPNSLPASLLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPK 121
Query: 284 SNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFE 343
N RDR HLMPIITP+YP NSSYNV ++TL +++ EF R + EIE K +W LF
Sbjct: 122 INVRDRSHLMPIITPAYPALNSSYNVMASTLCVLKTEFDRGLDRTLEIETKKFSWAKLFV 181
Query: 344 PYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPG--- 400
FF K++L++ I A++A DF W GWVESRLR L +E + R++P
Sbjct: 182 APAFFQRSKHFLRVEITARSAQDFDGWFGWVESRLRHLFLRLE----ALSDIRIHPFARF 237
Query: 401 ----DFSENSVKSSSQCH-----YFMGLGRKQ-GVSPQDGEKFDMRLT--VEEFKSHVVW 448
D + +SSS+C F+GL +P G + LT + +F ++
Sbjct: 238 FDFIDTKDTRPESSSKCEVHTSWLFIGLKFPAPKAAPVTGATHSVDLTSVIRDFATYTD- 296
Query: 449 MYSSWKQGMQIHVSHLRCQDIPDFVF 474
+ GM + + H+ IP++V
Sbjct: 297 QWEGRHGGMDMQIDHVTRSQIPEWVL 322
>gi|348680417|gb|EGZ20233.1| hypothetical protein PHYSODRAFT_442904 [Phytophthora sojae]
Length = 343
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/326 (42%), Positives = 189/326 (57%), Gaps = 21/326 (6%)
Query: 165 LQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFL 224
L D L LDE +V S NG RVT+RIL LVPN FR+TL ++ WA+ RGIYSN +GFL
Sbjct: 2 LDDRYLRGLDESSVRSCNGVRVTERILQLVPNQERFRTTLIAVKHWARVRGIYSNVLGFL 61
Query: 225 GGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA-MPHHVWDPR 283
GG+NWA+LVAR+CQ YPN+LP L+SRFF+I+ W WPNP+ML + + W+P+
Sbjct: 62 GGVNWAILVARICQFYPNSLPASLLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPK 121
Query: 284 SNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFE 343
N RDR HLMPIITP+YP NSSYNV ++TL I++ EF + EIE K +W LF
Sbjct: 122 INVRDRSHLMPIITPAYPALNSSYNVMASTLHILKAEFGKGFNRTLEIETKKSSWAKLFI 181
Query: 344 PYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYP---- 399
FF K++L++ I A NA DF W GWVESRLR L +E + + R++P
Sbjct: 182 APVFFQRSKHFLRVQITANNAEDFDGWFGWVESRLRHLFLRLE----ALPELRIHPFARF 237
Query: 400 GDFSE--------NSVKSSSQCHYFMGLG--RKQGVSPQDG-EKFDMRLTVEEFKSHVVW 448
DF E +S + F+GLG V+ G D+ + +F +
Sbjct: 238 FDFGETKGATPEGSSKREVHTSWLFIGLGFPAPNPVAATGGTHDVDLTSVIRDFAFYTD- 296
Query: 449 MYSSWKQGMQIHVSHLRCQDIPDFVF 474
+ + GM + + H+ IP++V
Sbjct: 297 QWEARHGGMDMQIDHVTRSQIPEWVL 322
>gi|449682525|ref|XP_002165152.2| PREDICTED: poly(A) polymerase gamma-like, partial [Hydra
magnipapillata]
Length = 351
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/338 (41%), Positives = 212/338 (62%), Gaps = 17/338 (5%)
Query: 146 VDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLR 205
+DLL+A+L + IPEDLD L ++LL NLD + V SLNGCRVTD IL LVPNI NFR TLR
Sbjct: 1 IDLLFARLALTTIPEDLDLLDENLLKNLDARCVRSLNGCRVTDEILHLVPNIANFRMTLR 60
Query: 206 CLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPV 265
++ WAK + +YSN +GFLGG++WA+LVAR+CQLYPNA+ LV +FF I++ W WP PV
Sbjct: 61 AIKLWAKNQFVYSNVLGFLGGVSWAMLVARICQLYPNAIAATLVQKFFLIYSKWAWPQPV 120
Query: 266 MLCPIQYQAMPHH------VWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQE 319
+L + MP +WDPR N DR HLMPIITP+YP NS++NVS ++ +MQ+
Sbjct: 121 LL-----KQMPTENKLNFPIWDPRMNPADRFHLMPIITPAYPQQNSTFNVSMSSRTVMQD 175
Query: 320 EFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLR 379
F+R ++ EEI + TW LF P +FF +K+Y+ + + ++ +W+G VES++R
Sbjct: 176 AFKRGFQVMEEIYSKTSTWKALFAPANFFQKYKHYIVLSAYSNSSEHHLEWEGLVESKIR 235
Query: 380 QLIHMIERDMGGVLQCRLYPGDFSEN-SVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLT 438
LI +ER+ L + P + +S + +F+GL ++ ++ K D+
Sbjct: 236 ILIVNLERNQFVKL-AHVNPKSYDPILKSESGTVSRWFIGLEFQKPEGTKNV-KVDITAE 293
Query: 439 VEEFKSHV---VWMYSSWKQGMQIHVSHLRCQDIPDFV 473
++ F S V + +++GM+ H++ + + +++
Sbjct: 294 IQYFTSTVHKQACQIAIFREGMRTEARHVKKKQLSNYL 331
>gi|24059888|dbj|BAC21354.1| poly(A) polymerase-like protein [Oryza sativa Japonica Group]
Length = 472
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/376 (37%), Positives = 207/376 (55%), Gaps = 21/376 (5%)
Query: 9 PTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQ 68
P L + ++ +L DE S E R +V+ +L+ IV DW K V ++ +
Sbjct: 10 PAFLAQMDSRRTTSLLQDEGGIPSPEADKKREQVIRKLNKIVMDWAKVVAYEQRVPP--- 66
Query: 69 IQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTP 128
+ A A + T+GSY LG GP +DIDALCVGPC AT FF L ++L++ P V +L
Sbjct: 67 -RRATATVLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVSELQT 125
Query: 129 VPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTD 188
V A+VP+++F+F+G+SVD YAQL P + S LL LD + SL+G RV +
Sbjct: 126 VESAKVPLMRFRFSGISVDFTYAQL-----PAIITS-NPHLLQKLDSLSWRSLSGVRVNE 179
Query: 189 RILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVL 248
+I+ LVPN + F+ LRC++ WAKRRGI+ + +GF GI+ A+L A VCQ YP N L
Sbjct: 180 QIVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGTINGL 239
Query: 249 VSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYN 308
+ FF IFAHW W PV L H P + +R MPI+ P P + N
Sbjct: 240 FTIFFDIFAHWNWQIPVSL---------HG--QPTNCRRPDGSFMPILLPCTPPEFCTSN 288
Query: 309 VSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFR 368
++ T + ++EE R L +E W+ LF P+ + ++ +L+I + A + + R
Sbjct: 289 MTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELR 348
Query: 369 QWKGWVESRLRQLIHM 384
W GWV+SR ++ +
Sbjct: 349 DWAGWVKSRFNLILKL 364
>gi|340500382|gb|EGR27268.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 512
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/364 (35%), Positives = 207/364 (56%), Gaps = 19/364 (5%)
Query: 32 SEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPST 91
+EEE + + + +L I+ +WI +V +K I + N L FGSY+L V ++
Sbjct: 56 TEEEIKQKDKKVQKLREIILNWISQVAEEKQIDFK-----YNGDLLIFGSYKLKVNQKNS 110
Query: 92 DIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYA 151
DIDA+C P + FFG LF +L + VED+ + VP+IK ++ G+ D+ ++
Sbjct: 111 DIDAVCFVPSFVECKKHFFGDLFHILSQKKEVEDIFSIQHTSVPLIKMRYFGIPFDISFS 170
Query: 152 QLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWA 211
+ S DLD +L +DE+++ +LNG RV + + N F+ L+C++ WA
Sbjct: 171 KQSQSQFKSDLDIKSIQILQGMDEKSIRALNGYRVAEWFNQNIKNKDTFKKALKCIKLWA 230
Query: 212 KRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQ 271
+ R IYSN +G+L GI W++LVA++CQLYPN ++ RFF +++ WKW + M I+
Sbjct: 231 QNRCIYSNILGYLNGIAWSILVAKICQLYPNYFVYGIIERFFFLYSRWKWHD--MAVQIE 288
Query: 272 Y-------QAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRA 324
Y Q + + W P + M IITP +PC N +YNV+ +TLR++QE+FQ
Sbjct: 289 YIQEDIYNQMICGNQWVPENKGISN---MMIITPCFPCINCAYNVTESTLRVIQEQFQYG 345
Query: 325 KELCEEIEAGK--RTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLI 382
+ +EI+ + + LF+P+ FF + +LQI I AKN ++ QWKG VE LR+L
Sbjct: 346 YRILDEIQKNQSHYDYQDLFKPFEFFKRYNAFLQIRILAKNKNEYFQWKGHVEINLRKLT 405
Query: 383 HMIE 386
+IE
Sbjct: 406 KIIE 409
>gi|428168713|gb|EKX37654.1| hypothetical protein GUITHDRAFT_41551, partial [Guillardia theta
CCMP2712]
Length = 336
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 183/297 (61%), Gaps = 4/297 (1%)
Query: 94 DALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQL 153
DA+ + Y R D F L+ +Q ++DL V +AR PVIKF+ + L A+L
Sbjct: 1 DAVMIVTRYIDR-SDMFDDLYVAMQAREDIKDLIKVQEARAPVIKFRMDDFEFKLSMARL 59
Query: 154 QFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKR 213
++ +PED D D L N+D ++V SLN RVTD I SLVPN+ +F+ ++ L+FWAK+
Sbjct: 60 NYATLPEDFDVTDDKHLKNVDPESVASLNSVRVTDTIRSLVPNLISFKYCIQALKFWAKK 119
Query: 214 RGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQ 273
RG+Y+N +GFLG I+ ++ AR+CQLYP ALP+ L+ FF + WKWP PV L I
Sbjct: 120 RGVYNNGLGFLGSISLEIMAARICQLYPKALPSRLLYFFFFTYCQWKWPQPVELAEIVAN 179
Query: 274 AMPHH--VWDPRSNQ-RDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEE 330
+ + VW + + DR+HLMPII+P YP N++ VS +TL+IM+E F RA +C++
Sbjct: 180 SHDLNLPVWGYGATEMSDRRHLMPIISPCYPAQNTAALVSRSTLKIMKEMFIRAMGVCKQ 239
Query: 331 IEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIER 387
I GK W LFEP F ++ N+LQI +A++ D WKG+ + + +I +ER
Sbjct: 240 IHEGKAGWCDLFEPVDLFSTYANFLQIQASARSKADHNMWKGFCAANIHNMISYLER 296
>gi|170054796|ref|XP_001863293.1| Poly(A) polymerase beta [Culex quinquefasciatus]
gi|167874980|gb|EDS38363.1| Poly(A) polymerase beta [Culex quinquefasciatus]
Length = 375
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 131/297 (44%), Positives = 180/297 (60%), Gaps = 21/297 (7%)
Query: 91 TDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLY 150
T+IDALCV P R D +FG +L++ P V + V + VP +K F+G+ +DLL+
Sbjct: 35 TNIDALCVAPRNIERQD-YFGSFLELLEKQPEVTECRAVEEMLVPDVKMNFDGIKIDLLF 93
Query: 151 AQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFW 210
A+L IP++ D +D LL NLD + + SLNGCR TD IL LVPNI NFR LR + W
Sbjct: 94 ARLALKEIPDNFDLREDMLLKNLDPKLMRSLNGCRATDEILRLVPNIDNFRLALRSTKLW 153
Query: 211 AKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPI 270
AK+ GIYS ++G+ GG++WA+LVAR CQL PN +P L K P+ V L
Sbjct: 154 AKKHGIYSTSLGYFGGVSWAMLVARTCQL-PNVVPVFL-----------KRPDTVNL--- 198
Query: 271 QYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEE 330
VWDPR N + R LMPIITP+YP NS+++VSS+T +IM EF R ++ +E
Sbjct: 199 -----GFQVWDPRVNVQGRFDLMPIITPAYPQQNSTFHVSSSTRKIMLNEFNRGMQITDE 253
Query: 331 IEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIER 387
I GK W LFE FF ++ ++ + + + N D +W G VES++R LI +ER
Sbjct: 254 IMLGKAGWDKLFEAPSFFFKYRYFIVLLVTSNNTDDLLEWCGLVESKIRYLIQNLER 310
>gi|62202042|gb|AAH92668.1| Papolb protein [Danio rerio]
Length = 283
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/254 (50%), Positives = 166/254 (65%), Gaps = 2/254 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D++ T++L + L +F E E R+ VLG+L+ +VK WI+ V+ K I
Sbjct: 25 ISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIREVSEAKNI 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
I K+FTFGSYRLGV DIDALCV P + R DFF + L+E V
Sbjct: 85 P-ASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-TDFFSSFYEKLKEQEEV 142
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPE+LD D LL NLD + + SLNG
Sbjct: 143 KDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNG 202
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 203 CRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 262
Query: 244 LPNVLVSRFFKIFA 257
+ LV +FF +F+
Sbjct: 263 VAATLVHKFFLVFS 276
>gi|444722668|gb|ELW63351.1| Poly(A) polymerase gamma [Tupaia chinensis]
Length = 554
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 119/227 (52%), Positives = 156/227 (68%), Gaps = 1/227 (0%)
Query: 110 FGKLFRMLQE-TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDS 168
GKL +++E V + V DA VPVIKF+F+G+ +DL++A+L I ++LD DS
Sbjct: 64 LGKLNNLVKEWISDVSESKAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDS 123
Query: 169 LLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGIN 228
L +LD + + SLNGCRVTD IL LVPN FR TLR ++ WAKRRGIYSN +GFLGG++
Sbjct: 124 RLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVS 183
Query: 229 WALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRD 288
WA+LVAR CQLYPNA + LV +FF +F+ W+WPNPV+L + + VWDPR N D
Sbjct: 184 WAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSD 243
Query: 289 RKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGK 335
R HLMPIITP+YP NS+YNVS++T +M EEF++ I K
Sbjct: 244 RYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQVYRQANNINMLK 290
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 25 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKAV 84
Query: 64 SD 65
D
Sbjct: 85 ED 86
>gi|340506959|gb|EGR32994.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 502
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 236/445 (53%), Gaps = 39/445 (8%)
Query: 41 EVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGP 100
E +L I+K+WI+++ +K I + L FGSY+L V +DIDA+C+ P
Sbjct: 64 EAAKQLRIIIKNWIQQINAEKQIENNH-----GGDLLFFGSYKLKVNSRGSDIDAVCLCP 118
Query: 101 CYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPE 160
Y R +FFG L +L + + +L P+ +A VP+IK +F G+ DL +A+ +
Sbjct: 119 FYVEREKNFFGDLVHILSQKKEITELFPIQEASVPIIKMQFQGILFDLSFARAPTQFQSD 178
Query: 161 DLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSL--VPNIRNFRSTLRCLRFWAKRRGIYS 218
+D + +L +DE++ S NG RV + + + N NF+S L+C++ WA+ RGIYS
Sbjct: 179 KIDLTSNQMLLGMDERSCKSFNGYRVAEWLSKKENIQNYENFQSILKCIKLWAQNRGIYS 238
Query: 219 NAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHH 278
N +G+L GI W +LV+++CQL+PN N L+ RFF +++ W+W + P+Q + +
Sbjct: 239 NIIGYLSGIGWTILVSKICQLFPNYSLNQLLERFFFLYSRWRWQD----FPVQVEYIVDD 294
Query: 279 V---------WDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCE 329
V W P + K M IITP +PC N ++NVSSTTLRI+QE+ E
Sbjct: 295 VANSKLSADQWRP-----EYKSSMMIITPCFPCMNCAHNVSSTTLRIIQEQLWHGYETIC 349
Query: 330 EIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIER-D 388
+I+ G + + LF+ + FF +K++L+I I A N D+ WKG VES LR+L + E
Sbjct: 350 KIQNGSKNYSDLFKSFKFFKKYKHFLEIKILATNKNDYTVWKGHVESGLRKLTRLFESPQ 409
Query: 389 MGGVLQCRLYPG-------DFSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEE 441
+L+ YP D K QC Y+ GL + ++ E +++
Sbjct: 410 YMNLLEVHPYPSYIENFLDDTQSQKNKYKFQCKYYYGL---MCLQSENNESINLKEACVY 466
Query: 442 FKSHVVWMYSSWK--QGMQIHVSHL 464
F + MY K + M I SHL
Sbjct: 467 FVEQLE-MYPMNKVLESMNIQCSHL 490
>gi|395823522|ref|XP_003785035.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Otolemur garnettii]
Length = 735
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 216/391 (55%), Gaps = 12/391 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S++AP D + L + + EEE R+ + G+L+ +VK+WI+ + K +
Sbjct: 24 VSSAAPQGTDCKRLQRLTETXKPSGVSEEEEELQCRILIWGKLNNLVKEWIRGLNESKKL 83
Query: 64 SD--EEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
E + L + L D DALC P + D FF + L+
Sbjct: 84 PXPVTENVGRNFFLLVNQCHHLLSGLTKGADTDALCAVPRHVNXRD-FFTSFYEKLKLQE 142
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V+DL V +A VPVIK F+G +D+L+A+L IPEDLD DSLL LD + + SL
Sbjct: 143 EVKDLRAVEEAFVPVIKLCFDGTKIDILFARLALQTIPEDLDLXDDSLLKRLDIRCIRSL 202
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGC++T+ IL LV N+ NFR TLRC++ WAK +YSN +GF+ G++WA+L AR CQLYP
Sbjct: 203 NGCKITNEILHLVSNMDNFRLTLRCIKLWAKHHTVYSNILGFVTGVSWAMLGARTCQLYP 262
Query: 242 NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
A+ + LV FF +F+ W+ PNPV++ + + VWD R N DR PIITP+YP
Sbjct: 263 IAMASTLVHXFFLVFSKWEXPNPVLVKQPEKCNLNLPVWDSRVNPSDRYQFAPIITPAYP 322
Query: 302 CTNSSYNVSSTTLRIMQEEFQRA----KELCEEIEAGKRTWITLFEPYHFFGSFKNYLQI 357
NS+Y+ S +T ++ EEF+ + L ++E K LFE FF +K+Y+ +
Sbjct: 323 QQNSTYSASISTQMVVVEEFKXSLSITDXLLSKVEXSK-----LFEAPIFFQKYKDYIVL 377
Query: 358 HIAAKNAGDFRQWKGWVESRLRQLIHMIERD 388
A +W G VES++ LI +E++
Sbjct: 378 LAGAPTEKQRLEWVGLVESKIXILIGSLEKN 408
>gi|325191928|emb|CCA26398.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 664
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 180/322 (55%), Gaps = 7/322 (2%)
Query: 71 EANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP--LVEDLTP 128
++ LF GS+ L +D+D + P + T D F L+ L P + L
Sbjct: 219 DSKIALFLGGSWHLKAGFSDSDLDIVAFAPNFVTL-DCFLTDLYVYLSNLPNSKITKLVA 277
Query: 129 VPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTD 188
+ A VP++ FK NGV +D L A+ +P L D +L +D ++ S++ RV+
Sbjct: 278 MKKATVPILAFKLNGVHIDFLLARSTELKVPTHLPICCDEILSGMDSISIRSMSIARVSS 337
Query: 189 RILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVL 248
+L LVP FRS +R +R WAKRRGIYSN GFLGGI+W LL +CQ+ P A +VL
Sbjct: 338 LVLELVPKGCAFRSFVRIIRLWAKRRGIYSNKTGFLGGISWTLLAVFICQMLPEASLSVL 397
Query: 249 VSRFFKIFAHWKWPNPVMLC-PIQYQAMPHHV-WDPRSNQRDRKHLMPIITPSYPCTNSS 306
+ RFF +F+ W WP PV + P A V W P++N DR HLMPIITP YP NS+
Sbjct: 398 LHRFFLVFSKWTWPTPVWIARPYLGNAEADGVQWCPQTNHHDRAHLMPIITPGYPSVNSA 457
Query: 307 YNVSSTTLRIMQEEFQRAKELCEEI--EAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNA 364
NV+ TLRIMQEEFQR + + EEI + W LF P F + NYL + + A N
Sbjct: 458 VNVNRATLRIMQEEFQRGRYIVEEITEKYAFGNWQNLFTPSEFLVRYDNYLVMRVQALNE 517
Query: 365 GDFRQWKGWVESRLRQLIHMIE 386
D QW ++ SRLR+L+ +E
Sbjct: 518 EDLDQWSNYIASRLRKLVESLE 539
>gi|297722067|ref|NP_001173397.1| Os03g0313200 [Oryza sativa Japonica Group]
gi|255674459|dbj|BAH92125.1| Os03g0313200 [Oryza sativa Japonica Group]
Length = 431
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/334 (38%), Positives = 191/334 (57%), Gaps = 15/334 (4%)
Query: 53 WIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGK 112
W KRV D+ EQ A + TFGSY LG GP +DIDA+CVGPC A+ FF
Sbjct: 3 WAKRVAYDQ----REQYWNTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIV 58
Query: 113 LFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHN 172
L +ML+E P V DL + +A+VP+++FKFNG+ VD Y QL E + + LL
Sbjct: 59 LRQMLEERPEVSDLHSIENAKVPLMRFKFNGMLVDFPYVQLPVINAAEAIHAFDPRLLAA 118
Query: 173 LDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALL 232
++E + L+G RV +I+ L+PNI+ F+ LRCL+ WA++RG++ + +GF GI+ A+L
Sbjct: 119 VNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAIL 178
Query: 233 VARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHL 292
A VC ++P+A + L + FF IF+HW WP PV L Q P W P
Sbjct: 179 AAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSLLD---QPTP---WRPHCCS-----F 227
Query: 293 MPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFK 352
MPI+ P P + +++ +T ++EE QR L + G W LF P+ + +K
Sbjct: 228 MPIVMPCSPPEFCASSITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYK 287
Query: 353 NYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIE 386
++L+I ++A A + R W GWV+SR R L+ +E
Sbjct: 288 HFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLE 321
>gi|58220771|gb|AAW68017.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 431
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/334 (38%), Positives = 191/334 (57%), Gaps = 15/334 (4%)
Query: 53 WIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGK 112
W KRV D+ EQ A + TFGSY LG GP +DIDA+CVGPC A+ FF
Sbjct: 3 WAKRVAYDQ----REQYWNTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIV 58
Query: 113 LFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHN 172
L +ML+E P V DL + +A+VP+++FKFNG+ VD Y QL E + + LL
Sbjct: 59 LRQMLEERPEVSDLHSIENAKVPLMRFKFNGMLVDFPYVQLPVINAAEAIHAFDPRLLAV 118
Query: 173 LDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALL 232
++E + L+G RV +I+ L+PNI+ F+ LRCL+ WA++RG++ + +GF GI+ A+L
Sbjct: 119 VNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAIL 178
Query: 233 VARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHL 292
A VC ++P+A + L + FF IF+HW WP PV L Q P W P
Sbjct: 179 AAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSLLD---QPTP---WRPHCCS-----F 227
Query: 293 MPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFK 352
MPI+ P P + +++ +T ++EE QR L + G W LF P+ + +K
Sbjct: 228 MPIVMPCSPPEFCASSITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYK 287
Query: 353 NYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIE 386
++L+I ++A A + R W GWV+SR R L+ +E
Sbjct: 288 HFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLE 321
>gi|348669628|gb|EGZ09450.1| hypothetical protein PHYSODRAFT_304981 [Phytophthora sojae]
Length = 695
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 163/507 (32%), Positives = 249/507 (49%), Gaps = 41/507 (8%)
Query: 7 SAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDE 66
S P D+ ST L K + + E+ + V+ L IV W++R T+D
Sbjct: 167 SPPNEYDLRSTNGLMKCVNAIAPLPTPEQLSAKHLVINELQRIVDIWLRR-TLDALEGAT 225
Query: 67 EQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDL 126
E A L GS+ L V +D+D + P +A + FF L L + V DL
Sbjct: 226 ETKSTETATLLLGGSWHLKVGMAESDLDVVAFMP-HAITSEIFFSSLCEHLGKEASVSDL 284
Query: 127 TPVPDARVPVIKFKFNGVSVDLLYAQL-QFSVIPEDL-----DSLQDSLLHNLDEQTVLS 180
A VPV+ F+ + V VDLL+A+ Q +P+ L D +Q ++ +D +V S
Sbjct: 285 VARRKAAVPVLSFQLSSVRVDLLFARYAQKQAVPKHLPFLPGDDVQ--VMRGMDATSVRS 342
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
L+ RV IL LVPN FRSTLR +R WA+RRG+YSN G+LGGI+WALLV VCQ++
Sbjct: 343 LSVARVASLILELVPNASVFRSTLRVIRLWARRRGLYSNKAGYLGGISWALLVCFVCQMF 402
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLC-PIQYQAMPHHV-WDPRSNQRDRKHLMPIITP 298
P A LV RFF + A W+WP P+++ P + + V WDP N DR HLMPIITP
Sbjct: 403 PRASVASLVHRFFSVLASWRWPTPILVAHPSNGGKVDNGVQWDPAHNIHDRAHLMPIITP 462
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIE----AGKRTWITLFEPYHFFGSFKNY 354
+P N++ NV+ +TLR+++EEF R + + +++ + +W LF P + ++
Sbjct: 463 GFPAVNTAVNVNLSTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHH 522
Query: 355 LQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQ-- 412
+ I + A N +W +V SR R+L+ ++ V P + ++
Sbjct: 523 IAIELRAPNEEALAEWSSFVASRTRKLVETLQH-TPSVATLHPLPEIVRPQAAQAKEDEV 581
Query: 413 -CHYFMG--LGRKQGVSPQDGE-KFDMRLTV------EEFKSHVVWMYSSW--------- 453
+YF+G + P+ GE + R EE + V + +
Sbjct: 582 VGYYFIGYTINTPPLPQPRRGERRHSARAPAPKASSNEELAKNCVASATRYFLATELDAA 641
Query: 454 ---KQGMQIHVSHLRCQDIPDFVFPGG 477
K GM++ +++ D+P VF GG
Sbjct: 642 AEKKPGMEVEINYRSWNDLPSTVFAGG 668
>gi|226492962|ref|NP_001152292.1| LOC100285931 [Zea mays]
gi|195654767|gb|ACG46851.1| poly [Zea mays]
gi|238006566|gb|ACR34318.1| unknown [Zea mays]
gi|414866508|tpg|DAA45065.1| TPA: poly [Zea mays]
Length = 535
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 207/377 (54%), Gaps = 18/377 (4%)
Query: 12 LDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQE 71
+D ++ L K + D + S E+ R V+ L IV DW KRV ++G + I
Sbjct: 68 MDECRSRSLLKFISDAGIVPSLEDERRRERVVRELGKIVMDWAKRVAYEQG--NWHWI-- 123
Query: 72 ANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPD 131
A+A + TFGSY LG GP +DID LC+GPC A+ FF L +ML+ P V +L +
Sbjct: 124 ASATVLTFGSYALGAYGPESDIDVLCIGPCIASLQHHFFVVLRQMLEGRPEVSELHSIEG 183
Query: 132 ARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRIL 191
A+VP+++FKFNG+ VD Y QL E + + +L N+D + L+G R +I+
Sbjct: 184 AKVPLMRFKFNGILVDFPYVQLPVINAAEAMHAFDPHVLENVDGPSWRCLSGVRANRQII 243
Query: 192 SLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSR 251
LVPN++ F+ LRCL+ WA++RG++ + +GF GI+ A+L A VC+ +PNA N L+S
Sbjct: 244 QLVPNMKKFQYLLRCLKLWARKRGLHCHLLGFFAGIHLAILAAYVCRRHPNASINTLLSL 303
Query: 252 FFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQR--DRKHLMPIITPSYPCTNSSYNV 309
FF IF HW WP PV L DP R D LMPI+ P P S +
Sbjct: 304 FFDIFVHWPWPLPVSLL------------DPPVPCRGPDGCSLMPIMLPCIPPEFCSSST 351
Query: 310 SSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQ 369
+ +T ++EE R L ++ + W LF P+ + +K +L+I ++A + R
Sbjct: 352 TESTFSKIKEELWRGYALSKDTRSTDFNWSWLFAPFPYGARYKCFLRIVLSAPMGEELRD 411
Query: 370 WKGWVESRLRQLIHMIE 386
W GWV+SR R L+ +E
Sbjct: 412 WVGWVKSRFRNLLLKLE 428
>gi|325184553|emb|CCA19046.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 799
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 183/537 (34%), Positives = 273/537 (50%), Gaps = 54/537 (10%)
Query: 32 SEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPST 91
+EE +V +L + + WIK + + G++ +EQI LF GSYRLG+ P +
Sbjct: 285 TEETKPMKVRMLKSISDALNRWIKVLGYEVGLT-QEQIAITQGALFLAGSYRLGLHDPDS 343
Query: 92 DIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYA 151
DID +C P Y H DFF +L V +L VP+A VP+I + + +DLL+A
Sbjct: 344 DIDVVCAVP-YHVSHRDFFCGFSAVLTRMTQVTELVTVPNASVPLISLSYQSIKLDLLFA 402
Query: 152 QLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWA 211
QL I DLD D +L + +V SLN RV+ ILSLVPN + FR R +R WA
Sbjct: 403 QLPLLSIGADLDIHSDHILAGVSAASVKSLNAPRVSSMILSLVPNRQVFRRVSRAIRAWA 462
Query: 212 KRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQ 271
+RRGIYS+ +G+L GINWALL A VCQL+P + + FF + + W+WP P+ML I
Sbjct: 463 RRRGIYSSKLGYLSGINWALLTAFVCQLFPGRTVSYVFVHFFYVLSEWQWPKPIML-NIP 521
Query: 272 YQA-MPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCE- 329
Y A + W RDR H+MPIITP+YP NSS V+++TL +++EE RA++L E
Sbjct: 522 YDAKLGLECWS--FQLRDRTHVMPIITPAYPQMNSSAQVTASTLSVIKEELWRARDLLER 579
Query: 330 EI---------------EAGK---------RTWITLFEPYHFFGSFKNYLQIHIAAKNAG 365
EI EAG +W L++P FF + Y+ + I ++
Sbjct: 580 EILSSITSHQQDQRTRKEAGALEKPDTDTFLSWDVLYQPSSFFVRYDWYVGLTIQI-DSS 638
Query: 366 DFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGV 425
+ +W+ +V SRL +L+ M++ D+ + YP F N SS F+GL R+
Sbjct: 639 ELGRWETFVCSRLHKLVKMLQ-DLPMIDLVHGYP-QFLVNKAGSS----LFLGLKRRS-- 690
Query: 426 SPQDGEKF--DMRLTVEEFKSHVVWMYS----SWKQGMQIHVSHLRCQDIPDFVFPGGVR 479
+D E+F + T+ F + + + S + MQ L D+PDFVF G
Sbjct: 691 --EDDEEFLSSVNRTISFFIATDLQQNAQSSESPAKRMQTTAVLLNWDDLPDFVFENGNA 748
Query: 480 PPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPS 536
E + ++ + T + +S A H S + S ++ L + G + P+
Sbjct: 749 DALQNREHDDQHLKQLSLTCM--GSTSNAQHKSRRHSHRSN----LAAASGSRKAPT 799
>gi|354681991|ref|NP_001238935.1| poly(A) polymerase alpha isoform 2 [Homo sapiens]
gi|441666293|ref|XP_004091880.1| PREDICTED: poly(A) polymerase alpha-like [Nomascus leucogenys]
gi|12654217|gb|AAH00927.1| PAPOLA protein [Homo sapiens]
gi|28375483|emb|CAD66560.1| unnamed protein product [Homo sapiens]
gi|119602051|gb|EAW81645.1| poly(A) polymerase alpha, isoform CRA_c [Homo sapiens]
Length = 285
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/256 (50%), Positives = 172/256 (67%), Gaps = 2/256 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHW 259
+ + LV +FF +F+ W
Sbjct: 264 IASTLVHKFFLVFSKW 279
>gi|301100486|ref|XP_002899333.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262104250|gb|EEY62302.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 990
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 134/296 (45%), Positives = 190/296 (64%), Gaps = 2/296 (0%)
Query: 34 EESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDI 93
E + +++VL +L ++ W+KRV ++ +S EE I LF GSYRLG+ P++DI
Sbjct: 441 EARMHKLQVLKQLSDLLTKWVKRVGRERELS-EEHITLTKGSLFLAGSYRLGLDDPNSDI 499
Query: 94 DALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQL 153
DA+CV P + T HDDFFG ++L +TP V L PV A VP+I F GV +DLL+++L
Sbjct: 500 DAVCVAPWHVT-HDDFFGSFCQLLAQTPGVSHLAPVRSAYVPLISLSFLGVRMDLLFSRL 558
Query: 154 QFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKR 213
S + + + D +L + E ++ +LN RV+ +L LVP R +R LR +R WA+R
Sbjct: 559 PMSSVESNQNIDSDHMLVGVHETSMKALNAPRVSSMLLCLVPRRREYRIVLRAVRAWARR 618
Query: 214 RGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQ 273
RGIYS +G+LGGI+WA+LVA VCQLYPNA P + RFF++ + W+WP PVML I
Sbjct: 619 RGIYSAKLGYLGGISWAILVAFVCQLYPNAEPAKIFVRFFQVLSEWQWPQPVMLNMIYDA 678
Query: 274 AMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCE 329
+ +WDPR + DR H+MPIITP+YP NSS VS ++ ++ EE RA+ L E
Sbjct: 679 GLGFDMWDPRQSVFDRSHIMPIITPAYPHMNSSVQVSQSSFSVIYEELWRARYLAE 734
>gi|349602954|gb|AEP98933.1| Poly(A) polymerase alpha-like protein, partial [Equus caballus]
Length = 279
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/256 (50%), Positives = 172/256 (67%), Gaps = 2/256 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHW 259
+ + LV +FF +F+ W
Sbjct: 264 IASTLVHKFFLVFSKW 279
>gi|1377870|gb|AAC52608.1| poly(A) polymerase VI [Mus musculus]
gi|149044214|gb|EDL97596.1| poly (A) polymerase alpha (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 293
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/256 (50%), Positives = 172/256 (67%), Gaps = 2/256 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 204 CRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNA 263
Query: 244 LPNVLVSRFFKIFAHW 259
+ + LV +FF +F+ W
Sbjct: 264 IASTLVHKFFLVFSKW 279
>gi|146081651|ref|XP_001464305.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|398012599|ref|XP_003859493.1| poly(A) polymerase, putative [Leishmania donovani]
gi|134068396|emb|CAM66686.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|322497708|emb|CBZ32784.1| poly(A) polymerase, putative [Leishmania donovani]
Length = 709
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 207/401 (51%), Gaps = 27/401 (6%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
+I+S P +V+ L + + EEES R VL R+ +V+ WI+ + +
Sbjct: 15 KIVSADGPRGGEVVHDVSLSEWCITR--IEPEEESNRRRSVLERIVNVVRVWIRHTMITE 72
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
E + ++F GSYR V +DID + + P TR + FF L L+ P
Sbjct: 73 FRMPEAAAAQVEGRIFATGSYRYNVHTSGSDIDMVLIAPSRITR-EHFFNTLAPRLKSEP 131
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V DL + ++RVP+I +G+ +DL + ++ +PE + D LL LDEQ+VLS
Sbjct: 132 WVTDLHCIRESRVPIIAMVCDGIDIDLSFGSIRQDRVPE---VITDDLLQGLDEQSVLSC 188
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
N RV I+ LVPN FR TLR ++ W K R IYSN GF GI WA+L A VCQ YP
Sbjct: 189 NAVRVAHNIMDLVPNKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIGWAILTAFVCQCYP 248
Query: 242 NALPNVLVSRFFKIFAHWKWPNP--------VMLCPIQYQAMPH--HVWDPRSNQRDRKH 291
N +V+RFF+ + W PNP + +A H WDPR ++ D
Sbjct: 249 NQNAAGMVTRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGRGWDPRESKSDAMA 308
Query: 292 LMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEE------IEAGKR-----TWIT 340
L P++TP+ P N+ YNV+ T LR + +EFQR +L + EA + W
Sbjct: 309 LFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAKFGPFGVWSR 368
Query: 341 LFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQL 381
+ EP FFG F++YLQI ++ +A ++ + VESR+R L
Sbjct: 369 VLEPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRIL 409
>gi|326508888|dbj|BAJ86837.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 208/377 (55%), Gaps = 19/377 (5%)
Query: 12 LDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQI-- 69
+D T L + L DE + EE R V+ L IV DW K G++ EE++
Sbjct: 73 MDYRRTHSLIQFLTDEGAIPTPEEEETRELVIRELKKIVTDWAK------GVASEERVPP 126
Query: 70 QEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPV 129
+ A + T+GSY LG GP +DIDALCVGPC A FF L ++L+ P V L V
Sbjct: 127 RRVTATVLTYGSYTLGAHGPESDIDALCVGPCIANLPHHFFVVLRQILKCRPEVSGLQTV 186
Query: 130 PDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDR 189
+A+VP+++F+F+G+SVDL YAQL + +++ L LD ++ SL+G RV ++
Sbjct: 187 ENAKVPLMRFRFSGISVDLTYAQLPVLDAVQAINTSSPQYLRRLDSRSWKSLSGVRVNEQ 246
Query: 190 ILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLV 249
I+ LVPN F+ LRC++ WA+RRG++ + +G GI+ A+L A VCQ +PNA N L
Sbjct: 247 IVQLVPNQEKFQILLRCIKLWARRRGLHCHLLGSFAGIHLAILAAYVCQRFPNATANGLF 306
Query: 250 SRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNV 309
+ FF IFAHW W PV L H P + + LMPI+ P P + N+
Sbjct: 307 TMFFGIFAHWPWHIPVDL---------HG--QPTNCRHSDGCLMPIVMPCTPPELCASNM 355
Query: 310 SSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQ 369
+ T R ++EE R L +++ + W +FEP+ + ++ +L+I + A + +
Sbjct: 356 TEGTFRKIREELMRGYVLTKDLGSHDFEWAWIFEPFPYSTTYGQFLRIALCAPTSEELHD 415
Query: 370 WKGWVESRLRQLIHMIE 386
W GWV+SR LI +E
Sbjct: 416 WIGWVKSRFPYLILKLE 432
>gi|294892267|ref|XP_002773978.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239879182|gb|EER05794.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 534
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/400 (37%), Positives = 216/400 (54%), Gaps = 26/400 (6%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S S T D+ +T + K+L +E ASEEE V + +V +W K G+
Sbjct: 18 VSLSKATPKDIAATDVMMKVLDEEAPPASEEERQLHKRVFELMSRLVTEWGKEYAFSTGL 77
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+E+ +L GS RLG+ PS+DID + V TR D FF L E V
Sbjct: 78 KEED----CRCELMAIGSARLGLQDPSSDIDCVVVAAHKVTR-DAFFELFPLKLSELNDV 132
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+L PVP A VPVIK KF GV VD+LY L + +D D+LL +DE++ S+NG
Sbjct: 133 TNLNPVPQAAVPVIKMKFMGVDVDVLYCGLAHPLSGPAIDPADDNLLCGMDEKSARSING 192
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
RV+D I + VP+ +F LR +R WA+RRGIYSNA+G+LGG++WA+LVARVCQL+PN
Sbjct: 193 VRVSDAIKACVPHFAHFLGALRVIRAWARRRGIYSNALGYLGGVSWAILVARVCQLFPNM 252
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQY------QAMPHH-VWDPRSNQRDRKHLMP-- 294
P+ LV RFF++++ W W +++ + HH VW P + +P
Sbjct: 253 GPSQLVVRFFRVYSRWNWDPSEGAVVLRHSEQRNGEGFQHHKVWCPPPKRTTTDQPLPLA 312
Query: 295 -----IITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRT---WITLFEPYH 346
+ITP+YP NS++ V+ T+ +++E +R + R+ W TL EP H
Sbjct: 313 ASPMAVITPAYPSMNSTFGVTRMTMDTIKKELERGAGIISSKGVDLRSRECWETLLEPIH 372
Query: 347 FF----GSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLI 382
FF G +K +LQI I + + +G V S+L+ L+
Sbjct: 373 FFDYDQGGYKQFLQIEIGGASELSHKSAEGLVNSKLKPLL 412
>gi|157866653|ref|XP_001687718.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
gi|68125332|emb|CAJ03188.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
Length = 700
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 207/401 (51%), Gaps = 27/401 (6%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
+I+S P +V+ L + + EEES R VL R+ +V+ WI+ + +
Sbjct: 15 KIVSADGPKGGEVVHELSLSEWCITR--IEPEEESNRRRSVLERIVNVVRVWIRHTMITE 72
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
E + ++F GSYR V +DID + + P TR + FF L L+ P
Sbjct: 73 FRMPEAAAAQVEGRIFATGSYRYNVHTSGSDIDMVLIAPSRITR-EHFFNTLAPRLKSEP 131
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V DL + ++RVP+I +G+ +DL + ++ +PE + D LL LDEQ+VLS
Sbjct: 132 WVTDLHCIRESRVPIIAMVCDGIDIDLSFGSIRQDRVPE---VITDDLLQGLDEQSVLSC 188
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
N RV I+ LVPN FR TLR ++ W K R IYSN GF GI WA+L A VCQ YP
Sbjct: 189 NAVRVAHNIMDLVPNKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIGWAILTAFVCQCYP 248
Query: 242 NALPNVLVSRFFKIFAHWKWPNP--------VMLCPIQYQAMPH--HVWDPRSNQRDRKH 291
N +V+RFF+ + W PNP + +A H WDPR ++ D
Sbjct: 249 NQNAAGMVTRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGRGWDPRESKSDAMA 308
Query: 292 LMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEE------IEAGKR-----TWIT 340
L P++TP+ P N+ YNV+ T LR + +EFQR +L + EA + W
Sbjct: 309 LFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAKFGPFGVWSR 368
Query: 341 LFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQL 381
+ EP FFG F++YLQI ++ +A ++ + VESR+R L
Sbjct: 369 VLEPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRIL 409
>gi|327262763|ref|XP_003216193.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Anolis carolinensis]
Length = 678
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 146/415 (35%), Positives = 232/415 (55%), Gaps = 17/415 (4%)
Query: 129 VPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTD 188
V DA VPVIKF+F+G+ +DL++A+L I ++LD DS L +LD + + SLNG RVTD
Sbjct: 108 VEDAYVPVIKFEFDGIEIDLVFARLALPTISDNLDLRDDSSLKSLDIRCIRSLNGFRVTD 167
Query: 189 RILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGF--LGGINWALLVARVCQLYPNALPN 246
IL LVPN NFR TLR ++ WAKR+ + + + + L I+WA+L C++Y N +
Sbjct: 168 EILHLVPNKENFRLTLRAIKLWAKRKYLINLILCYQPLCLISWAVLSXITCKIYQNGRGS 227
Query: 247 VLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSS 306
V+R + F+ +WPNPV+L + + VWDPR N DR HLMPIITP+YP NS+
Sbjct: 228 FSVNRCYSSFSFREWPNPVLLKEPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNST 287
Query: 307 YNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGD 366
YNVS++T IM EEF+ + +EI GK W L EP +FF +K+Y+ + ++
Sbjct: 288 YNVSTSTRAIMVEEFKHGLVVADEIFQGKSDWPKLLEPPNFFQKYKHYIVLTASSSTEEH 347
Query: 367 FRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCH---YFMGLGRKQ 423
+W G VES++R L+ +ER+ L + P F N + + +F+G+ K+
Sbjct: 348 HLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNRTQPKESDYVSLWFLGIIFKK 406
Query: 424 GVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGGV 478
++ E ++ LT ++ F V ++ K+GM+I +H++ + + + P +
Sbjct: 407 A---ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL-HYYLPADL 462
Query: 479 --RPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGL 531
+ KS+ + R V++ T L S ++ ++G + G+A SH L
Sbjct: 463 LQKRKKSMPDVGRHTRLVLKRTSLDNSYLDSSRDTNGAAQLTSFGGIAKPSSHPL 517
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + + +F EEE RV VL +L+ +VK+WI V +K +
Sbjct: 49 ISVAFPRDVDRIYTEKLIEAMKPFGVFEDEEELNRRVVVLDKLNNLVKEWIAEVGKNKAV 108
Query: 64 SD 65
D
Sbjct: 109 ED 110
>gi|440487552|gb|ELQ67335.1| Poly(A) polymerase pla1 [Magnaporthe oryzae P131]
Length = 484
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 118/269 (43%), Positives = 178/269 (66%), Gaps = 4/269 (1%)
Query: 123 VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQ-FSVIPEDLD-SLQDS-LLHNLDEQTVL 179
+ DL+ V DA VP+IKF+F+G+S+DL+++++ +P D + +L DS LL LDE+ +
Sbjct: 7 ITDLSVVVDAFVPIIKFEFSGISIDLIFSRIATMKQLPADPNWNLSDSNLLRGLDEKELR 66
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
S+NG RVTD I+SLVP FR+ LR ++ WA+RR IY N +GF GG+ WA+LVARVCQL
Sbjct: 67 SVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGVAWAMLVARVCQL 126
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
YP A +V+V++FF I W WP PV+L I+ + +W+P+ DR HLMPIITP+
Sbjct: 127 YPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLMPIITPA 186
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQIH 358
YP +++N++ ++ ++ E +A +L I GK W LF+ + FF FK Y+Q+
Sbjct: 187 YPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGKLPWKDLFQKHTFFTKDFKYYIQVI 246
Query: 359 IAAKNAGDFRQWKGWVESRLRQLIHMIER 387
A+K+ + W G+VES++R L+ +ER
Sbjct: 247 AASKDKESHKLWSGFVESKVRLLVQGLER 275
>gi|397621901|gb|EJK66507.1| hypothetical protein THAOC_12570 [Thalassiosira oceanica]
Length = 756
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 169/557 (30%), Positives = 265/557 (47%), Gaps = 80/557 (14%)
Query: 43 LGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCY 102
+GRL ++W++ V + +G+S + A +L+T GSYRLGV P DID + V P +
Sbjct: 1 MGRLH---REWVRSVAIKRGLS-PDAADSAGGELYTSGSYRLGVHEPGADIDTIAVAPSF 56
Query: 103 ATRHDDFFGK-------------------------LFRMLQETPLVEDLTPVPDARVPVI 137
+R DDFFG L ++ P V + PV +A VP++
Sbjct: 57 CSR-DDFFGSNYVPPGDAMDEGDDEDGEQARDPDSLAERIRRQPHVTNFVPVENAAVPIL 115
Query: 138 KFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNI 197
F + G+++DLL+A+L S IP + D D +L +D T SLNG RVT+ I +LV
Sbjct: 116 TFDWEGINIDLLFARLSTSSIPRNFDIDNDLVLSGVDAATEKSLNGPRVTNLIAALVGGT 175
Query: 198 ----RNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFF 253
+ F + +R +R WAK RG+YSN MG+ GG+N + VA V QLYPNA P + +FF
Sbjct: 176 EQRYQTFLTVVRLVRKWAKNRGLYSNKMGYWGGVNINMAVALVLQLYPNACPASALRKFF 235
Query: 254 KIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTT 313
+F W+WPNPVML + VW+ R+ + P+ITP+YP NS+ +VS T
Sbjct: 236 LVFKSWRWPNPVMLTRPHDAELGLQVWNSHQAANMRQ-VAPMITPAYPAMNSTLSVSRQT 294
Query: 314 LRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGW 373
L+I+ EEF R + ++ L++ Y G + ++ I D + W G+
Sbjct: 295 LQILHEEFCRGHGIVDK----------LYKDYQ-RGRDRPGGRLCITGPTLHDAQAWAGF 343
Query: 374 VESRLRQLI-HMIERDMGGVLQCRLYPGDFSE---------NSVKSSSQCHYFMGLGRKQ 423
VESRLR+L+ M+ R + + + +L+P F + ++ YF+G +
Sbjct: 344 VESRLRKLVSDMLGRSL-PLSKIQLWPKKFDVCCADKTALLTHAQRANSITYFIGF--RV 400
Query: 424 GVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPG------- 476
GE+ D+ + F+ + + GM I +++P F G
Sbjct: 401 DKLRMRGEQLDIERQLSNFRKFELGRFHPLVPGMDILPKSFGVKELPTICFDGTYEGGKL 460
Query: 477 -GVRPPKSLNEKKRKRIEV------------IESTKLKKSESSTAGHSSGQKSSQTESGV 523
++ ++L E KRIE +E + KK E++ A + + E +
Sbjct: 461 AAMKRRRALIEADPKRIEAKKKKKLAKLKRKMEEIQRKKREAAAA-KTEVVDEKEDEGDI 519
Query: 524 ALDGSHGLKSGPSVEPS 540
L G K VE S
Sbjct: 520 VLGAHEGDKPAEEVEHS 536
>gi|401418000|ref|XP_003873492.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489722|emb|CBZ24982.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 706
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 207/401 (51%), Gaps = 27/401 (6%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
+I+S P +V+ L + + EEES R VL R+ +V+ WI+ + +
Sbjct: 15 KIVSADGPKGGEVVHDVSLSEWCITR--IEPEEESNRRRSVLERIVNVVRVWIRHTMITE 72
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
E + ++F GSYR V +DID + + P TR + FF L L+ P
Sbjct: 73 FRMPEAAAAQVEGRIFATGSYRYNVHTSGSDIDMVLIAPSRITR-EHFFNTLAPRLKGEP 131
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L + ++RVP+I +G+ +DL + ++ +PE + D LL LDEQ+VLS
Sbjct: 132 WVTELHCIRESRVPIIAMVCDGIDIDLSFGSIRQDRVPE---VITDDLLQGLDEQSVLSC 188
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
N RV I+ LVPN FR TLR ++ W K R IYSN GF GI WA+L A VCQ YP
Sbjct: 189 NAVRVAHNIMDLVPNKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIGWAILTAFVCQCYP 248
Query: 242 NALPNVLVSRFFKIFAHWKWPNP--------VMLCPIQYQAMPH--HVWDPRSNQRDRKH 291
N +++RFF+ + W PNP + +A H WDPR ++ D
Sbjct: 249 NQNAAGMITRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGRGWDPRESKSDAMA 308
Query: 292 LMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEE------IEAGKR-----TWIT 340
L P++TP+ P N+ YNV+ T LR + +EFQR +L + EA + W
Sbjct: 309 LFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAKFGPFGVWSR 368
Query: 341 LFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQL 381
+ EP FFG F++YLQI ++ +A ++ + VESR+R L
Sbjct: 369 VLEPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRIL 409
>gi|9453844|dbj|BAB03278.1| poly A polymerase [Drosophila melanogaster]
Length = 459
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 108/216 (50%), Positives = 148/216 (68%)
Query: 173 LDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALL 232
LD ++V SLNGCRVTD IL+LVPNI NFR LR ++ WAK+ GIYSN++G+ GG+ WA+L
Sbjct: 1 LDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAML 60
Query: 233 VARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHL 292
VAR CQLYPNA LV +FF +F+ WKWPNPV+L + VWDPR N DR H
Sbjct: 61 VARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHP 120
Query: 293 MPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFK 352
MPIITP+YP NS++NVS +T +++ EF R + +EI G+ W LFE FF ++
Sbjct: 121 MPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYR 180
Query: 353 NYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERD 388
+++ + + ++ A D +W G VES++R LI +ER+
Sbjct: 181 HFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERN 216
>gi|170036999|ref|XP_001846348.1| poly a polymerase [Culex quinquefasciatus]
gi|167879976|gb|EDS43359.1| poly a polymerase [Culex quinquefasciatus]
Length = 531
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/340 (38%), Positives = 187/340 (55%), Gaps = 25/340 (7%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D T EL+K +F E + R+E+L +L +VK W++ V++ K +
Sbjct: 7 ISLAEPKTEDHTKTVELQKAFEPYNVFEDEPKLNHRMEILSKLKTLVKQWVRNVSISKNM 66
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ K++TFGSYRL V T+IDALC P R D +FG F +L++ P V
Sbjct: 67 P-EVLAEKLGGKIYTFGSYRLSVNHKGTNIDALCEAPRNIERQD-YFGSFFELLKKQPEV 124
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
V +A VPVI F+G+ +DLL+A+L IP++ D +D LL NLD
Sbjct: 125 TGCRAVEEALVPVINMNFDGIKIDLLFARLALKEIPDNFDLREDMLLKNLDP-------- 176
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
+++ VP R R GIYSN++G+ GG++W +LVAR CQL PN
Sbjct: 177 -----KLVERVPRHR---------RDPTAEHGIYSNSLGYFGGVSWGMLVARTCQL-PNV 221
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ V +FF +F WKWP PV L + VWD R N +DR HLM IITP+YP
Sbjct: 222 IAATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMSIITPAYPQQ 281
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFE 343
NS+++VSS+T ++M EF ++ +EI GK W LFE
Sbjct: 282 NSTFHVSSSTRKVMLNEFNSDMQITDEIMLGKAGWDKLFE 321
>gi|240274559|gb|EER38075.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus H143]
Length = 493
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 142/421 (33%), Positives = 218/421 (51%), Gaps = 69/421 (16%)
Query: 145 SVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTL 204
S+DL+YA+L +P +LD LL LDE+ + +NG RVTD IL LVP + FR L
Sbjct: 50 SIDLIYARLLVHSVPLNLDLRNKDLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLAL 109
Query: 205 RCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNP 264
R ++ WA+RR IYSN +GF GG+ WA+LVARVCQLYP A + +V +FF+I WKWP P
Sbjct: 110 RAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQP 169
Query: 265 VMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRA 324
V+L PI+ + VW+P+ D+ HLMPIITP+YP +++NVS +T ++ E +R
Sbjct: 170 VLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRG 229
Query: 325 KELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIH 383
++ ++I G+ +W LF + FF +K YL I A+++ W G VES+LR L+
Sbjct: 230 GDIADKIFVGQLSWNDLFTRHTFFSQDYKYYLNITSASRSKDAQSVWSGLVESKLRHLVG 289
Query: 384 MIERD----------------------------MGGVLQCRLYPGDFSENSVKSSSQCH- 414
++R MGG ++ + G +E + +S+ H
Sbjct: 290 ALDRKSSIEIAHPFPKGFERIHICKDEKEIVEVMGGSMKYQAK-GTKTETTDESNDPQHT 348
Query: 415 ------------------------------YFMGLGRKQGVSPQDGEKFDMRLTVEEFKS 444
Y++GL K V P D+ FKS
Sbjct: 349 AASQNGGEAIKMPETDHPNGDNGCTLYTTTYYIGLELKPLV-PGASRSLDISADTHIFKS 407
Query: 445 HVVWMYSSWKQGMQ-IHVSHLRCQDIPDFVF-PGGVRPPKSLNEKKRKRIEVIESTKLKK 502
++ ++ G+ ++++H+R D+P+ VF PG VRP + K+K ++ E T K+
Sbjct: 408 TCT-SWAQYQPGINDLNITHVRNYDLPEDVFQPGEVRPSRP----KKKVVKKSEPTAQKR 462
Query: 503 S 503
+
Sbjct: 463 N 463
>gi|154334339|ref|XP_001563421.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134060437|emb|CAM37605.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 709
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 138/401 (34%), Positives = 205/401 (51%), Gaps = 27/401 (6%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
+I+S P +V+ L + + EEES R VL R+ +V+ WI+ + +
Sbjct: 15 KIVSADGPKGGEVVHDVSLGEWCITR--IEPEEESNRRRSVLERIVNVVRVWIRHTMIAE 72
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
E + ++F GSYR V +DID + + P TR + FF L L+ P
Sbjct: 73 FRMPEAAAAQVEGRIFATGSYRYNVHTSGSDIDMVLIAPSRITR-EHFFNTLAPRLKGEP 131
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V +L + ++RVP+I +G+ +DL + ++ +PE + D LL LDEQ+VLS
Sbjct: 132 WVTELHCIRESRVPIIAMVCDGIDIDLSFGSIRQDRVPE---VITDDLLQGLDEQSVLSC 188
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
N RV I+ LVPN FR LR ++ W K R IYSN GF GI WA+L A VCQ YP
Sbjct: 189 NAVRVAHNIMDLVPNKAVFRQALRFVKAWGKARSIYSNTFGFPSGIGWAILTAFVCQCYP 248
Query: 242 NALPNVLVSRFFKIFAHWKWPNP--------VMLCPIQYQAMPH--HVWDPRSNQRDRKH 291
N +++RFF+ + W PNP + +A H WDPR ++ D
Sbjct: 249 NQNAAGMITRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGRGWDPRESKSDAMA 308
Query: 292 LMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEE------IEAGKR-----TWIT 340
L P++TP+ P N+ YNV+ T LR + +EFQR +L +EA + W
Sbjct: 309 LFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSNDLGMSAVEAEAKFGPFGVWSR 368
Query: 341 LFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQL 381
+ EP FFG F++YL I ++ +A ++ + VESR+R L
Sbjct: 369 VLEPAPFFGKFRHYLHIKVSCSDAEHYQAYADGVESRIRIL 409
>gi|407396778|gb|EKF27540.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 645
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 132/370 (35%), Positives = 195/370 (52%), Gaps = 25/370 (6%)
Query: 33 EEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTD 92
EEE+ R VL ++ IV+ WI+ + + E + ++F GSYR V +D
Sbjct: 41 EEEANRRRSVLEHINNIVRAWIRSTMITEFRMPAEAATQVEGRIFATGSYRYNVHASGSD 100
Query: 93 IDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQ 152
ID + + P TR + FF L LQ P + +L + DARVP+I +G+ +DL +
Sbjct: 101 IDIVLIAPNRITR-EHFFNTLAPRLQHEPRITELHCIRDARVPLIAMVADGIDIDLSFGS 159
Query: 153 LQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAK 212
++ +PE + D LL LD+Q+VLS N RV I+ LVP+ +FR LR ++ W K
Sbjct: 160 IRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGK 216
Query: 213 RRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNP-------- 264
RGIYSN GF GI WA+LVA VCQ +PN +V RFF+I+ W PNP
Sbjct: 217 ARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGRENR 276
Query: 265 --VMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQ 322
+ ++ + WDPR ++ D L P++TP+ P N+ +NV+ T LR + EF
Sbjct: 277 AIYLTETMRVKTNLGRGWDPRESKSDAMALFPVLTPAVPYGNACFNVTLTNLRQLCAEFA 336
Query: 323 RAKELCEEI------EAGKR-----TWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWK 371
R E+C EA R W L EP FFG++K YL + ++ +A ++ +
Sbjct: 337 RGHEICSSSLVASAEEAKSRFGPHGIWSRLLEPVKFFGNYKYYLHVLVSCTDAEAYQGYV 396
Query: 372 GWVESRLRQL 381
VES++R L
Sbjct: 397 DAVESKIRFL 406
>gi|71419820|ref|XP_811284.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70875931|gb|EAN89433.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 645
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/370 (35%), Positives = 193/370 (52%), Gaps = 25/370 (6%)
Query: 33 EEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTD 92
EEE+ R VL ++ IV+ WI+ + + E + ++F GSYR V +D
Sbjct: 41 EEEANRRRSVLEHINNIVRAWIRSTMITEFRMPAEAATQVEGRIFATGSYRYNVHASGSD 100
Query: 93 IDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQ 152
ID + + P TR + FF L LQ P + +L + DARVP+I +G+ +DL +
Sbjct: 101 IDIVLIAPNRITR-EHFFNTLAPRLQHEPRITELHCIRDARVPLIAMVADGIDIDLSFGS 159
Query: 153 LQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAK 212
++ +PE + D LL LD+Q+VLS N RV I+ LVP+ +FR LR ++ W K
Sbjct: 160 IRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGK 216
Query: 213 RRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNP-------- 264
RGIYSN GF GI WA+LVA VCQ +PN +V RFF+I+ W PNP
Sbjct: 217 ARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGRENR 276
Query: 265 --VMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQ 322
+ ++ + WDPR ++ D L P++TP+ P N+ +NV+ T LR + EF
Sbjct: 277 AIYLTETMRVKTNLGRGWDPRESKSDAMALFPVLTPAVPYGNACFNVTLTNLRQLCTEFA 336
Query: 323 RAKELCEEI------EAGKR-----TWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWK 371
R E+C EA R W L EP FFG K YL + ++ +A ++ +
Sbjct: 337 RGHEICSSSLVTSAEEAKSRFGPHGIWSRLLEPVKFFGEHKYYLHVLVSCTDAEAYQGYV 396
Query: 372 GWVESRLRQL 381
VESR+R L
Sbjct: 397 DAVESRIRFL 406
>gi|148686801|gb|EDL18748.1| poly (A) polymerase alpha, isoform CRA_b [Mus musculus]
Length = 540
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/388 (36%), Positives = 212/388 (54%), Gaps = 25/388 (6%)
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
GCRVTD IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPN
Sbjct: 4 GCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPN 63
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
A+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR HLMPIITP+YP
Sbjct: 64 AIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 123
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK 362
NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K+Y+ + +A
Sbjct: 124 QNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 183
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGL 419
+W G VES++R L+ +E++ L + P F E+ + + + +GL
Sbjct: 184 TEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKESPDREEFRTMWVIGL 242
Query: 420 GRKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHLRCQDIPDFVF 474
K+ ++ E + LT ++ F V + K M+I H++ + + +
Sbjct: 243 VFKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL- 298
Query: 475 PGGVRPPKSLNEKKRKRIEVIESTKLKKS------ESSTAGHSSGQKSSQTESGVALDGS 528
P L ++K+ E ++ T L S +S + S+ S + GS
Sbjct: 299 -----PSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGS 353
Query: 529 HGLKSGPSVEPSTSSVSS-STSASSRPQ 555
++ P+ + +SV+S S S PQ
Sbjct: 354 SQGRNSPAPAVTAASVTSIQASEVSVPQ 381
>gi|428177975|gb|EKX46852.1| hypothetical protein GUITHDRAFT_94125 [Guillardia theta CCMP2712]
Length = 613
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 216/397 (54%), Gaps = 14/397 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S P+V D+ +L + L + +E + R + L ++ I+K W + K I
Sbjct: 33 LSFDGPSVADMKLNDKLMETLKQLGAYEDKECNQRREQALENIEKIMKTWTCEICKTKNI 92
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S + + + ++ FGSY LGV +DID LC+ P R +FF ++ L E +
Sbjct: 93 SLD---FDCSCRVVPFGSYCLGVHSHDSDIDLLCIIPEVVNR-SEFFSRVPAKLAEVEGI 148
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLD-SLQDSLLHNLDEQTVLSLN 182
+ + DA VPVIKF++ G +DL ++ IP DL+ +L LL D + + LN
Sbjct: 149 TCIKSLADAFVPVIKFQYCGFDIDLGMVRMPCGSIPPDLNIALDRHLLRIEDTKDITCLN 208
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
G RVT +L VPNI NF+ LR ++ WA+RR IYSN +GF GG+ W ++ A+V QLYP
Sbjct: 209 GPRVTYELLQRVPNIENFKVLLRAIKLWARRREIYSNIIGFPGGVAWGIMAAQVAQLYPK 268
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPH-------HVWDPRSNQRDRKHLMPI 295
P++L+ +FF ++ HWK+ + +++ P + P H WDP + R+ L +
Sbjct: 269 MCPSLLLEKFFFLYKHWKFEDAIIVAPPEECQAPDGQERYNLHSWDPTRHHFSRRPLT-V 327
Query: 296 ITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYL 355
ITP+YP NS++N++ + L +++ E RA L + + G+ ++ LFEP FF + ++
Sbjct: 328 ITPTYPMANSTFNITDSALNVIRNEISRANSLTQGLAQGESSYNDLFEPAMFFKQYGTFV 387
Query: 356 QIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGV 392
QI + + G+VES++R+L+ + G+
Sbjct: 388 QIEVLGSEK-HIEAFSGYVESQIRKLVEKLTTSQLGL 423
>gi|355709238|gb|AES03525.1| poly polymerase alpha [Mustela putorius furo]
Length = 275
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 126/254 (49%), Positives = 169/254 (66%), Gaps = 2/254 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 23 ISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 82
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 83 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 140
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 141 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 200
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRVTD IL LVPNI NFR TLR ++ WA IYSN +GFLGG++WA+LVAR CQLYPNA
Sbjct: 201 CRVTDEILHLVPNIDNFRLTLRAIKLWAXXHNIYSNILGFLGGVSWAMLVARTCQLYPNA 260
Query: 244 LPNVLVSRFFKIFA 257
+ + LV +FF +F+
Sbjct: 261 IASTLVHKFFLVFS 274
>gi|413955904|gb|AFW88553.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
Length = 508
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 204/377 (54%), Gaps = 18/377 (4%)
Query: 12 LDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQE 71
+D ++ L K + + + S E+ R V+ L IV DW +RV ++G +Q
Sbjct: 68 MDECRSRSLLKFISNAGIEPSLEDERRRERVVRELGKIVMDWARRVAYEQG----KQHWI 123
Query: 72 ANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPD 131
+A + TFGSY LG GP +DID LC+GP A+ FF L +ML+ P V +L +
Sbjct: 124 TSATVLTFGSYALGAYGPESDIDVLCIGPYIASLQHHFFVVLRQMLEGRPEVSELHSIEG 183
Query: 132 ARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRIL 191
A+VP+++FKFNG+ VD Y QL E + + +L N+D + L+G R +I+
Sbjct: 184 AKVPLMRFKFNGILVDFPYVQLPVINAAEAMHAFDPHVLENVDGPSWRCLSGVRANRQII 243
Query: 192 SLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSR 251
LVPN++ F+ LRCL+ WA++RG+ + +GF GI+ A+L A VC+ +PNA N L+S
Sbjct: 244 QLVPNMKKFQYLLRCLKLWARKRGLDCHLLGFFAGIHLAILAAYVCRRHPNASINTLLSL 303
Query: 252 FFKIFAHWKWPNPVMLCPIQYQAMPHHVWDP--RSNQRDRKHLMPIITPSYPCTNSSYNV 309
FF IF HW WP PV L DP D LMPI+ P P S +
Sbjct: 304 FFDIFVHWPWPLPVSLL------------DPPVLCGGPDGCSLMPIMLPCIPPEFCSSST 351
Query: 310 SSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQ 369
+ +T ++EE +R L ++ + W LF P+ + +K +L+I ++A + R
Sbjct: 352 TESTFSKIKEELRRGYALSKDTRSTDSDWSWLFAPFPYGARYKCFLRIVLSAPMEDELRD 411
Query: 370 WKGWVESRLRQLIHMIE 386
W GWV+SR R L+ +E
Sbjct: 412 WVGWVKSRFRNLLLKLE 428
>gi|407832565|gb|EKF98495.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 645
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 132/370 (35%), Positives = 193/370 (52%), Gaps = 25/370 (6%)
Query: 33 EEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTD 92
EEE+ R VL ++ IV+ WI+ + + E + ++F GSYR V +D
Sbjct: 41 EEEANRRRSVLEHINNIVRAWIRSTMITEFRMPAEAATQVEGRIFATGSYRYNVHASGSD 100
Query: 93 IDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQ 152
ID + + P TR + FF L LQ P + +L + DARVP+I +G+ +DL +
Sbjct: 101 IDIVLIAPNRITR-EHFFNTLAPRLQHEPRITELHCIRDARVPLIAMVADGIDIDLSFGS 159
Query: 153 LQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAK 212
++ +PE + D LL LD+Q+VLS N RV I+ LVP+ +FR LR ++ W K
Sbjct: 160 IRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGK 216
Query: 213 RRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNP-------- 264
RGIYSN GF GI WA+LVA VCQ +PN +V RFF+I+ W PNP
Sbjct: 217 ARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGRENR 276
Query: 265 --VMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQ 322
+ ++ + WDPR ++ D L P++TP+ P N+ +NV+ T LR + EF
Sbjct: 277 AIYLTETMRVKTNLGRGWDPRESKSDAMALFPVLTPAVPYGNACFNVTLTNLRQLCTEFA 336
Query: 323 RAKELCEEI------EAGKR-----TWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWK 371
R E+C EA R W L EP FFG K YL + ++ +A ++ +
Sbjct: 337 RGHEICSSSLVTSAEEAKSRFGPHGIWSRLLEPVKFFGEHKYYLHVLVSCTDAEAYQGYV 396
Query: 372 GWVESRLRQL 381
VES++R L
Sbjct: 397 DAVESKIRFL 406
>gi|72391414|ref|XP_846001.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175902|gb|AAX70026.1| poly(A) polymerase, putative [Trypanosoma brucei]
gi|70802537|gb|AAZ12442.1| poly(A) polymerase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 687
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 130/370 (35%), Positives = 193/370 (52%), Gaps = 25/370 (6%)
Query: 33 EEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTD 92
EEE+ R VL ++ IV+ WI+ + + E + ++F GSYR V G +D
Sbjct: 41 EEEANRRRSVLEHINCIVRAWIRSTMIAEFRMPAEAAAQVEGRIFATGSYRYNVHGSGSD 100
Query: 93 IDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQ 152
ID + + P TR + FF L L + +L + DARVP+I +G+ +DL +
Sbjct: 101 IDIVLIAPNRITR-EHFFNTLAPRLSHESRITELHCIRDARVPLIAMVADGIDIDLSFGS 159
Query: 153 LQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAK 212
++ +PE + D LL LD+Q+VLS N RV I+ LVP+ +FR LR ++ W K
Sbjct: 160 IRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGK 216
Query: 213 RRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNP-------- 264
RGIYSN GF GI WA+LVA VCQ +PN +V RFF+I+ W PNP
Sbjct: 217 ARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGMVVRFFRIYHTWFSPNPHGSGRENR 276
Query: 265 --VMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQ 322
+ ++ + WDPR ++ D L P++TP+ P N+ YNV+ T LR + +EF
Sbjct: 277 AIYLTETMRVKTNLGRGWDPRESKSDALALFPVLTPAVPYGNACYNVTMTNLRQLCDEFA 336
Query: 323 RAKELCEE-----IEAGKR------TWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWK 371
R E+C +E K W + EP FFG +K YL + + +A ++ +
Sbjct: 337 RGHEICSSYIGMGVEETKMKLGPHGIWSKILEPVKFFGEYKYYLHVQVTCTDAEAYQGYV 396
Query: 372 GWVESRLRQL 381
VES++R L
Sbjct: 397 DAVESKIRFL 406
>gi|428177976|gb|EKX46853.1| hypothetical protein GUITHDRAFT_162826 [Guillardia theta CCMP2712]
Length = 572
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 211/390 (54%), Gaps = 14/390 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S P+V D+ +L + L + +E + R + L ++ I+K W + K I
Sbjct: 33 LSFDGPSVADMQLNDKLMETLKQLGAYEDKECNKRREQALENIEKIMKTWTCEICKTKNI 92
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
S + + + ++ FGSY LGV +DID LC+ P R +FF ++ L E +
Sbjct: 93 SLD---FDCSCRVAPFGSYCLGVHSHDSDIDLLCIIPEVVNR-SEFFSRVPAKLAEVEGI 148
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLD-SLQDSLLHNLDEQTVLSLN 182
+ + DA PVIKF++ G +DL ++ IP DL+ +L LL D + + LN
Sbjct: 149 TCIKSLADAFAPVIKFQYCGFDIDLGMVRMPCGSIPPDLNIALDRHLLRIEDTKDITCLN 208
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
G RVT +L VPNI NF+ LR ++ WA+RR IYS +GF GG+ W ++ A+V QLYP
Sbjct: 209 GPRVTYELLQRVPNIENFKVLLRAIKLWARRREIYSKIIGFPGGVAWGIMAAQVAQLYPK 268
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPH-------HVWDPRSNQRDRKHLMPI 295
P++L+ +FF ++ HWK+ + +++ P + P H WDP R+ L +
Sbjct: 269 MCPSLLLEKFFHLYKHWKFEDAIIVAPPEECQAPDGQERYNLHAWDPTRRHFSRRPLT-V 327
Query: 296 ITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYL 355
ITP+YP NS++NV+ + L +++ E RA L + + G+ ++ LFEP FF + ++
Sbjct: 328 ITPTYPMDNSTFNVTDSALNVIRNEISRANSLTQGLAQGESSYNDLFEPAMFFKQYGTFV 387
Query: 356 QIHIAAKNAGDFRQWKGWVESRLRQLIHMI 385
QI + + G+VES++R+L+ +
Sbjct: 388 QIEVLGSEK-HIEAFSGYVESQIRKLVEKL 416
>gi|405977000|gb|EKC41473.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 264
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 113/251 (45%), Positives = 165/251 (65%), Gaps = 3/251 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS P ++D+ +++LE+ + +F SEEE R+E+L R++ +V+ WIK V+ K
Sbjct: 14 ISLEGPKLVDLKLSEKLEEAMRPHGVFESEEEMSHRMEILNRINTLVRKWIKDVSRQKSE 73
Query: 64 SD--EEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
+ E +I K+ FGSYRLG DID +C+ P + R DFF +L+ TP
Sbjct: 74 INYLEYKINAFGGKVCIFGSYRLGAHTKGADIDTVCIAPGHVDR-SDFFSSFVEVLKHTP 132
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V+DL + +A VP+IK F+G+ +D+++A+L IP+++D +SLL +L+ + V SL
Sbjct: 133 EVKDLRAIEEAYVPLIKMTFDGIELDMVFARLTLPQIPDEIDLRDESLLRHLNTKCVRSL 192
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
NGCRVTD IL LVPN NFR TL ++ WAK++GIYS +GFLGG++WA+LVARVCQLYP
Sbjct: 193 NGCRVTDEILHLVPNQHNFRRTLLAIKIWAKKKGIYSKVLGFLGGVSWAILVARVCQLYP 252
Query: 242 NALPNVLVSRF 252
NA P L+ +F
Sbjct: 253 NAAPATLLHKF 263
>gi|261329513|emb|CBH12495.1| poly(A) polymerase, putative [Trypanosoma brucei gambiense DAL972]
Length = 687
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 192/370 (51%), Gaps = 25/370 (6%)
Query: 33 EEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTD 92
EEE+ R VL ++ IV+ WI+ + + E + ++F GSYR V G +D
Sbjct: 41 EEEANRRRSVLEHINCIVRAWIRSTMIAEFRMPAEAAAQVEGRIFATGSYRYNVHGSGSD 100
Query: 93 IDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQ 152
ID + + P TR + FF L L + +L + DARVP+I +G+ +DL +
Sbjct: 101 IDIVLIAPNRITR-EHFFNTLAPRLSHESRITELHCIRDARVPLIAMVADGIDIDLSFGS 159
Query: 153 LQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAK 212
++ +PE + D LL LD+Q+VLS N RV I+ L P+ +FR LR ++ W K
Sbjct: 160 IRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMDLAPHKASFRQALRFIKAWGK 216
Query: 213 RRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNP-------- 264
RGIYSN GF GI WA+LVA VCQ +PN +V RFF+I+ W PNP
Sbjct: 217 ARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGMVVRFFRIYHTWFSPNPHGSGRENR 276
Query: 265 --VMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQ 322
+ ++ + WDPR ++ D L P++TP+ P N+ YNV+ T LR + +EF
Sbjct: 277 AIYLTETMRVKTNLGRGWDPRESKSDALALFPVLTPAVPYGNACYNVTMTNLRQLCDEFA 336
Query: 323 RAKELCEE-----IEAGKR------TWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWK 371
R E+C +E K W + EP FFG +K YL + + +A ++ +
Sbjct: 337 RGHEICSSYIGMGVEETKMKLGPHGIWSKILEPVKFFGEYKYYLHVQVTCTDAEAYQGYV 396
Query: 372 GWVESRLRQL 381
VES++R L
Sbjct: 397 DAVESKIRFL 406
>gi|342182011|emb|CCC91490.1| putative poly(A) polymerase [Trypanosoma congolense IL3000]
Length = 677
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/370 (34%), Positives = 190/370 (51%), Gaps = 25/370 (6%)
Query: 33 EEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTD 92
EEE+ R VL ++ IV+ WI+ + + E + ++F GSYR V G +D
Sbjct: 41 EEEANRRRSVLEHINCIVRAWIRSTMITEFRMPAEAAAQVEGRIFATGSYRYNVHGSGSD 100
Query: 93 IDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQ 152
ID + + P TR + FF L L P + L + DARVP+I +G+ +DL +
Sbjct: 101 IDIVLIAPNRITR-EHFFNTLAPRLSHEPRITKLHCIRDARVPLIAMVADGIDIDLSFGS 159
Query: 153 LQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAK 212
++ +PE + D LL LD+Q+VLS N RV I+ LVP+ +FR LR ++ W K
Sbjct: 160 IRQDRVPE---VITDDLLQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGK 216
Query: 213 RRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNP-------- 264
RGIYSN GF GI WA+LVA VCQ +PN +V RFF+I+ W PNP
Sbjct: 217 ARGIYSNTFGFPSGIGWAILVAFVCQCHPNQNAAGMVVRFFRIYHAWFSPNPQGSGKENR 276
Query: 265 --VMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQ 322
+ ++ + WDPR ++ D L P++TP+ P N+ +NV+ T LR + EF
Sbjct: 277 AIYLTETMRVKTNLGRCWDPRESKSDALALFPVLTPAVPYGNACFNVTMTNLRQLCAEFS 336
Query: 323 RAKELC-----------EEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWK 371
R +C +E W + EP FFG +K Y+ + + +A ++ +
Sbjct: 337 RGHNICSSCIGMNVNETKEKFGPHGLWSKILEPVKFFGEYKYYMHVQVTCSDAELYQGYV 396
Query: 372 GWVESRLRQL 381
VES++R L
Sbjct: 397 EAVESKIRFL 406
>gi|116207486|ref|XP_001229552.1| hypothetical protein CHGG_03036 [Chaetomium globosum CBS 148.51]
gi|88183633|gb|EAQ91101.1| hypothetical protein CHGG_03036 [Chaetomium globosum CBS 148.51]
Length = 592
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/293 (42%), Positives = 184/293 (62%), Gaps = 11/293 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+ PT + L + L + F S +E+ R EVL +L+ I +++R K
Sbjct: 12 ISTTLPTEPEKRLNHALHQELRAQGTFESPQETEKRKEVLRQLEKITTVFVQRAAAQKEP 71
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYAT--RHDDFFGKLFRMLQETP 121
+ I++A ++FT+GSYRLGV GP +D+D L V P Y T ++ + F ++ +
Sbjct: 72 KNTFMIRDAIGRVFTYGSYRLGVYGPGSDMDTLVVAPKYVTVEQYFEIFPEVLVEMAPPG 131
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQ-FSVIPEDLD-SLQDS-LLHNLDEQTV 178
+ DLTPVP+A VP+IKF+F+G+S+DL++ +Q +P++ + SL D+ LL L E V
Sbjct: 132 AITDLTPVPEAFVPIIKFEFSGISIDLIFCSIQTLKQLPDEKNWSLADNNLLRGLSENEV 191
Query: 179 LSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQ 238
SLNG RVTD IL LVP F+ LR ++ WA+R+ IY+N MG+ GG+ WA+LVARVCQ
Sbjct: 192 RSLNGTRVTDDILHLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWAMLVARVCQ 251
Query: 239 LYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA----MPHHVWDPRSNQR 287
LYP A V+V++FF I W WP PV+L I+Y + +P VW+P+S++R
Sbjct: 252 LYPKATSAVVVNKFFHIMFKWPWPLPVLLKDIEYGSPVTRVP--VWNPKSSRR 302
>gi|242212591|ref|XP_002472128.1| predicted protein [Postia placenta Mad-698-R]
gi|220728772|gb|EED82659.1| predicted protein [Postia placenta Mad-698-R]
Length = 438
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 194/374 (51%), Gaps = 81/374 (21%)
Query: 30 FASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGP 89
F +EEE+ R VLGRL +VK ++ R+ + +G+S + + + K+FTFGSYRLGV GP
Sbjct: 10 FETEEEAKRREIVLGRLASLVKRFVTRIGIKQGLS-QAAAEASGGKIFTFGSYRLGVHGP 68
Query: 90 STDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLL 149
+DID LCV P + +R +DFF ML+ T V++ + VPDA VP+IK K +G+ +DLL
Sbjct: 69 GSDIDTLCVVPKHVSR-EDFFEDFEEMLKATEGVDEASAVPDAYVPIIKTKISGIPIDLL 127
Query: 150 YAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRF 209
A+L S IP+ L D+LL NLDE RCL
Sbjct: 128 MARLALSSIPDTLTLQDDNLLRNLDE-----------------------------RCL-- 156
Query: 210 WAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCP 269
YPNA+ +VSRFF I W WP PV+L
Sbjct: 157 ------------------------------YPNAIAGAIVSRFFIIMYQWTWPQPVLLKQ 186
Query: 270 IQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAK---- 325
I+ +P VW+P+ DR H MPIITP+YP +++NV+++T IM EEF++ +
Sbjct: 187 IEEGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATHNVTASTQMIMTEEFKKGQLEFY 246
Query: 326 ------------ELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFR-QWKG 372
E+ + + G W LF + FF ++ YLQ+ IA+ + + + +W G
Sbjct: 247 SPGRYLLFLAGSEIVDRVIVGSADWSELFSKHDFFHKYRYYLQV-IASTGSSELQIKWAG 305
Query: 373 WVESRLRQLIHMIE 386
VESR+RQL+ +E
Sbjct: 306 TVESRIRQLVMKLE 319
>gi|414888171|tpg|DAA64185.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 545
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 130/380 (34%), Positives = 203/380 (53%), Gaps = 24/380 (6%)
Query: 17 TKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKL 76
+ L + L DE S E+ R +V+ L IV W V ++ + A A +
Sbjct: 82 SSSLVQFLKDEGAVLSPEDENKREKVIRELKKIVMHWANAVAYEQSVPQ----GLATATV 137
Query: 77 FTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPV 136
T+GSY LG GP +DID LC+GPC AT FF L ++LQ P V ++ V A+VP+
Sbjct: 138 LTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSEVHTVEKAKVPL 197
Query: 137 IKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPN 196
++F+F G++VDL YAQL + +++ LL +D ++ SL+G RV ++I+ LVPN
Sbjct: 198 MRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVRVNEQIVQLVPN 257
Query: 197 ---------IRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV 247
++ F++ LRC++ WA++RG++ + +GF GI+ A+L A VC+ +P+A +
Sbjct: 258 AEFCFTGNTMQKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASVSG 317
Query: 248 LVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSY 307
L + FF+ FAHW W PV L H + R LMPI+ P P +
Sbjct: 318 LFAVFFQTFAHWPWQVPVSL---------HDELTTCLHSEGR--LMPIVMPCTPPEFCAS 366
Query: 308 NVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDF 367
V+ +L+ ++EE R L + W LFEP+ + ++ +L+I + A +
Sbjct: 367 TVTKGSLKKIREELTRGYVLTRDPLRHDFQWSWLFEPFPYDQKYQQFLRIALRAPTIAEL 426
Query: 368 RQWKGWVESRLRQLIHMIER 387
W GWV+SR R LI +ER
Sbjct: 427 GDWAGWVKSRFRFLILKLER 446
>gi|222624807|gb|EEE58939.1| hypothetical protein OsJ_10608 [Oryza sativa Japonica Group]
Length = 519
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/374 (34%), Positives = 191/374 (51%), Gaps = 42/374 (11%)
Query: 13 DVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEA 72
D +K L + + S EE L R V+ LD IV W KRV D+ EQ
Sbjct: 78 DAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAKRVAYDQ----REQYWNT 133
Query: 73 NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDA 132
A + TFGSY LG GP +DIDA+CVGPC A+ FF L +ML+E P V DL + +A
Sbjct: 134 TATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVSDLHSIENA 193
Query: 133 RVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILS 192
+ + + LL ++E + L+G RV +I+
Sbjct: 194 KA---------------------------IHAFDPRLLAAVNEPSWRCLSGVRVNRQIMQ 226
Query: 193 LVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRF 252
L+PNI+ F+ LRCL+ WA++RG++ + +GF GI+ A+L A VC ++P+A + L + F
Sbjct: 227 LLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHATLSSLFNSF 286
Query: 253 FKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSST 312
F IF+HW WP PV L Q P W P MPI+ P P + +++ +
Sbjct: 287 FDIFSHWHWPLPVSLLD---QPTP---WRPHCCS-----FMPIVMPCSPPEFCASSITRS 335
Query: 313 TLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKG 372
T ++EE QR L + G W LF P+ + +K++L+I ++A A + R W G
Sbjct: 336 TFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELRDWVG 395
Query: 373 WVESRLRQLIHMIE 386
WV+SR R L+ +E
Sbjct: 396 WVKSRFRNLLLKLE 409
>gi|219117850|ref|XP_002179712.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217408765|gb|EEC48698.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 336
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 130/341 (38%), Positives = 185/341 (54%), Gaps = 33/341 (9%)
Query: 39 RVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCV 98
R VL R+ + +DWI+ V + KG+S + + A +LFT GSYRLGV P DID + V
Sbjct: 1 RERVLNRMGELCRDWIRTVCIKKGLS-TDVVNVAGGQLFTSGSYRLGVHEPGADIDTILV 59
Query: 99 GPCYATRHDDFFG-----------------KLFRMLQETPLVEDLTPVPDARVPVIKFKF 141
P R D FFG L ++ P V + PV A VP++ F +
Sbjct: 60 SPNACQRMD-FFGTTILSTVEGEEGTRDPTSLAERIRTHPDVTNFVPVESAAVPILTFDW 118
Query: 142 NGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNI---- 197
G+++DLL+A+L + +P D D D++L D T SLNG RVT+ I +LV
Sbjct: 119 EGINIDLLFARLNTASVPPDFDIDNDAVLDGADGATEKSLNGPRVTNLIAALVSGTPQRY 178
Query: 198 RNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFA 257
+ F + +RC+R WAK RG+YSN MG+ GG+N + VA V QLYPNA L+ +FF +F
Sbjct: 179 QVFLTVVRCVRKWAKARGLYSNKMGYWGGVNINIGVALVVQLYPNACGASLLRKFFLVFK 238
Query: 258 HWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIM 317
W+WP P++L VW + R + P+ITP+YP NS+ VS TL+I+
Sbjct: 239 TWRWPQPLLLTKPHDAGYGLPVWSVATAVR---QVAPMITPAYPAMNSTLAVSRQTLQIL 295
Query: 318 QEEFQRAKELCEEI-------EAGKRTWITLFEPYHFFGSF 351
QEEF R + +++ A + W TLFEP FF ++
Sbjct: 296 QEEFNRGHTVVDQLWKDYQKNPAQELNWNTLFEPSDFFINY 336
>gi|218192685|gb|EEC75112.1| hypothetical protein OsI_11288 [Oryza sativa Indica Group]
Length = 519
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 130/374 (34%), Positives = 191/374 (51%), Gaps = 42/374 (11%)
Query: 13 DVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEA 72
D +K L + + S EE L R V+ LD IV W KRV D+ EQ
Sbjct: 78 DAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAKRVAYDQ----REQYWNT 133
Query: 73 NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDA 132
A + TFGSY LG GP +DIDA+CVGPC A+ FF L +ML+E P V DL + +A
Sbjct: 134 TATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVSDLHSIENA 193
Query: 133 RVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILS 192
+ + + LL ++E + L+G RV +I+
Sbjct: 194 KA---------------------------IHAFDPRLLAVVNEPSWRCLSGVRVNRQIMQ 226
Query: 193 LVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRF 252
L+PNI+ F+ LRCL+ WA++RG++ + +GF GI+ A+L A VC ++P+A + L + F
Sbjct: 227 LLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHATLSSLFNSF 286
Query: 253 FKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSST 312
F IF+HW WP PV L Q P W P MPI+ P P + +++ +
Sbjct: 287 FDIFSHWHWPLPVSLFD---QPTP---WRPHCCS-----FMPIVMPCSPPEFCASSITRS 335
Query: 313 TLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKG 372
T ++EE QR L + G W LF P+ + +K++L+I ++A A + R W G
Sbjct: 336 TFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELRDWVG 395
Query: 373 WVESRLRQLIHMIE 386
WV+SR R L+ +E
Sbjct: 396 WVKSRFRNLLLKLE 409
>gi|340054738|emb|CCC49040.1| putative poly(A) polymerase [Trypanosoma vivax Y486]
Length = 671
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 188/370 (50%), Gaps = 25/370 (6%)
Query: 33 EEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTD 92
EEE+ R VL L+ IV+ WI+ + + E + ++F GSYR V +D
Sbjct: 41 EEEANRRRSVLEHLNCIVRAWIRSTMITEFRMPAEAAAQVEGRIFATGSYRYNVHASGSD 100
Query: 93 IDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQ 152
ID + + P TR + FF L L V +L + DARVP+I +G+ +DL +
Sbjct: 101 IDIVLIAPNRITR-EHFFDTLAPRLSHEARVTELHCIRDARVPLIAMVVDGIDIDLSFGS 159
Query: 153 LQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAK 212
++ +PE + D LL LD+Q+VLS N RV I+ LVP+ +FR LR ++ W K
Sbjct: 160 IRQDRVPE---VITDDLLRGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGK 216
Query: 213 RRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNP-------- 264
RGIYSN GF GI WA+LVA V Q +PN +V RFF+I+ W PNP
Sbjct: 217 ARGIYSNTFGFPSGIGWAILVAFVSQCHPNQNAAGMVVRFFRIYHSWFSPNPHESGKENR 276
Query: 265 --VMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQ 322
+ ++ + WDPR ++ D L P++TP+ P N+ YNV+ T LR + EF
Sbjct: 277 AIYLTETMRVKTSLGRCWDPRESKSDALALFPVLTPAVPYGNACYNVTITNLRQLCSEFA 336
Query: 323 RAKELCE----------EIEAGKRT-WITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWK 371
R E+C + GK W + EP FG ++ YL I I + ++ +
Sbjct: 337 RGHEICSSCIGMSVNDTRTKFGKYGLWNKILEPVKVFGEYRYYLHIQITCTDPEAYQGYV 396
Query: 372 GWVESRLRQL 381
VES++R L
Sbjct: 397 DAVESKIRFL 406
>gi|218200293|gb|EEC82720.1| hypothetical protein OsI_27407 [Oryza sativa Indica Group]
Length = 455
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 189/375 (50%), Gaps = 42/375 (11%)
Query: 12 LDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQE 71
+D T L + L DE S E R +V+ +L+ IV DW K V ++ + +
Sbjct: 16 MDSRRTTSLLQFLKDEGGIPSPEADKKREQVIRKLNKIVMDWAKVVAYEQRVPP----RR 71
Query: 72 ANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPD 131
A A + T+GSY LG GP +DIDALCVGPC AT FF L ++L++ P V +L V
Sbjct: 72 ATATVLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVSELQTVES 131
Query: 132 ARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRIL 191
A+ + LL LD ++ SL+G RV ++I+
Sbjct: 132 AKAIITS---------------------------NPHLLQKLDSRSWRSLSGVRVNEQIV 164
Query: 192 SLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSR 251
LVPN + F+ LRC++ WAKRRGI+ + +GF GI+ A+L A VCQ YP N L +
Sbjct: 165 QLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGTINGLFTI 224
Query: 252 FFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSS 311
FF IFAHW W PV L H P + +R MPI+ P P + N++
Sbjct: 225 FFDIFAHWNWQIPVSL---------HG--QPTNCRRPDGSFMPILLPCTPPEFCTSNMTK 273
Query: 312 TTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWK 371
T + ++EE R L +E W+ LF P+ + ++ +L+I + A + + R W
Sbjct: 274 GTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELRDWA 333
Query: 372 GWVESRLRQLIHMIE 386
GWV+SR R LI +E
Sbjct: 334 GWVKSRFRNLILKLE 348
>gi|426246819|ref|XP_004017185.1| PREDICTED: poly(A) polymerase alpha-like, partial [Ovis aries]
Length = 244
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/200 (56%), Positives = 141/200 (70%), Gaps = 2/200 (1%)
Query: 69 IQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTP 128
I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V+DL
Sbjct: 19 IENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEVKDLRA 77
Query: 129 VPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTD 188
V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNGCRVTD
Sbjct: 78 VEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTD 137
Query: 189 RILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVL 248
IL LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA+ + L
Sbjct: 138 EILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTL 197
Query: 249 VSRFFKIFAHWKW-PNPVML 267
V +FF +F+ W+W P PV+L
Sbjct: 198 VHKFFLVFSKWQWHPTPVLL 217
>gi|395539230|ref|XP_003771575.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
Length = 379
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/253 (48%), Positives = 159/253 (62%), Gaps = 8/253 (3%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS AP D I T++L + L +F E+E R+ +LG+L+ +VK+WI ++ K +
Sbjct: 126 ISLVAPKETDCILTQKLIETLKPFGVFEEEKELQRRILILGKLNNLVKEWIWEISESKNL 185
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRH---DDFFGKLFRMLQET 120
+ K+FTFGSYRLGV DIDALCV P RH DFF + L+
Sbjct: 186 PQSVN-ENVGGKIFTFGSYRLGVHTKGADIDALCVAP----RHVDQSDFFTSFYEKLKLQ 240
Query: 121 PLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLS 180
V+DL V +A VPVIK F+G+ +D+L+A+L PEDLD DSLL NLD + + S
Sbjct: 241 EEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTFPEDLDLHDDSLLKNLDIRCIRS 300
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNGCRVTD IL LVPNI NFR TLR ++ WAK IYSN +GFLGG++WA+LVAR CQLY
Sbjct: 301 LNGCRVTDEILHLVPNIDNFRLTLRAIKIWAKHHNIYSNILGFLGGVSWAMLVARTCQLY 360
Query: 241 PNALPNVLVSRFF 253
PNA+ + S +
Sbjct: 361 PNAIASTQTSAHY 373
>gi|226498102|ref|NP_001142239.1| uncharacterized protein LOC100274408 [Zea mays]
gi|194707762|gb|ACF87965.1| unknown [Zea mays]
Length = 430
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 182/325 (56%), Gaps = 20/325 (6%)
Query: 72 ANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPD 131
A A + T+GSY LG GP +DID LC+GPC AT FF L ++LQ P V ++ V
Sbjct: 18 ATATVLTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSEVHTVEK 77
Query: 132 ARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRIL 191
A+VP+++F+F G++VDL YAQL + +++ LL +D ++ SL+G RV ++I+
Sbjct: 78 AKVPLMRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVRVNEQIV 137
Query: 192 SLVPN---------IRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
LVPN ++ F++ LRC++ WA++RG++ + +GF GI+ A+L A VC+ +P+
Sbjct: 138 QLVPNAEFCFTGNTMQKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPD 197
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
A + L + FF+ FAHW W PV L H + + LMPI+ P P
Sbjct: 198 ASVSGLFAVFFQTFAHWPWQVPVSL---------HD--ELTTCLHSEGRLMPIVMPCTPL 246
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK 362
+ V+ +L+ ++EE R L + W LFEP+ + ++ +L+I + A
Sbjct: 247 EFCASTVTKGSLKKIREELTRGYVLTRDPLRHDFQWSWLFEPFPYDQKYQQFLRIALRAP 306
Query: 363 NAGDFRQWKGWVESRLRQLIHMIER 387
+ W GWV+SR R LI +ER
Sbjct: 307 TIAELGDWAGWVKSRFRFLILKLER 331
>gi|222637720|gb|EEE67852.1| hypothetical protein OsJ_25654 [Oryza sativa Japonica Group]
Length = 454
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/373 (34%), Positives = 186/373 (49%), Gaps = 42/373 (11%)
Query: 12 LDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQE 71
+D T L + L DE S E R +V+ +L+ IV DW K V ++ + +
Sbjct: 16 MDSRRTTSLLQFLKDEGGIPSPEADKKREQVIRKLNKIVMDWAKVVAYEQRVPP----RR 71
Query: 72 ANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPD 131
A A + T+GSY LG GP +DIDALCVGPC AT FF L ++L++ P V +L V
Sbjct: 72 ATATVLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVSELQTVES 131
Query: 132 ARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRIL 191
A+ + LL LD + SL+G RV ++I+
Sbjct: 132 AKAIITS---------------------------NPHLLQKLDSLSWRSLSGVRVNEQIV 164
Query: 192 SLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSR 251
LVPN + F+ LRC++ WAKRRGI+ + +GF GI+ A+L A VCQ YP N L +
Sbjct: 165 QLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGTINGLFTI 224
Query: 252 FFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSS 311
FF IFAHW W PV L H P + +R MPI+ P P + N++
Sbjct: 225 FFDIFAHWNWQIPVSL---------HG--QPTNCRRPDGSFMPILLPCTPPEFCTSNMTK 273
Query: 312 TTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWK 371
T + ++EE R L +E W+ LF P+ + ++ +L+I + A + + R W
Sbjct: 274 GTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELRDWA 333
Query: 372 GWVESRLRQLIHM 384
GWV+SR ++ +
Sbjct: 334 GWVKSRFNLILKL 346
>gi|414888168|tpg|DAA64182.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 430
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 182/325 (56%), Gaps = 20/325 (6%)
Query: 72 ANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPD 131
A A + T+GSY LG GP +DID LC+GPC AT FF L ++LQ P V ++ V
Sbjct: 18 ATATVLTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSEVHTVEK 77
Query: 132 ARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRIL 191
A+VP+++F+F G++VDL YAQL + +++ LL +D ++ SL+G RV ++I+
Sbjct: 78 AKVPLMRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVRVNEQIV 137
Query: 192 SLVPN---------IRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
LVPN ++ F++ LRC++ WA++RG++ + +GF GI+ A+L A VC+ +P+
Sbjct: 138 QLVPNAEFCFTGNTMQKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPD 197
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
A + L + FF+ FAHW W PV L H + + LMPI+ P P
Sbjct: 198 ASVSGLFAVFFQTFAHWPWQVPVSL---------HD--ELTTCLHSEGRLMPIVMPCTPP 246
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAK 362
+ V+ +L+ ++EE R L + W LFEP+ + ++ +L+I + A
Sbjct: 247 EFCASTVTKGSLKKIREELTRGYVLTRDPLRHDFQWSWLFEPFPYDQKYQQFLRIALRAP 306
Query: 363 NAGDFRQWKGWVESRLRQLIHMIER 387
+ W GWV+SR R LI +ER
Sbjct: 307 TIAELGDWAGWVKSRFRFLILKLER 331
>gi|118376886|ref|XP_001021625.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|89303391|gb|EAS01379.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 707
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 132/487 (27%), Positives = 240/487 (49%), Gaps = 31/487 (6%)
Query: 3 IISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKG 62
I+S P D + + K ++D+ + E+E L + +++ ++ IV W+ + +++
Sbjct: 136 ILSQEYPQEQDYQESSYI-KQMIDKYFYHPEKEKL-KEQIIMKIQEIVNQWMVNININER 193
Query: 63 ISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL 122
E+ A++ FGSY LGV+ D+D +C+ P + R F G+L+ M+
Sbjct: 194 KIPEQVAHMQLARVLPFGSYFLGVSSVDGDVDLVCIAPNFVDRFKHFNGQLYDMISNMDG 253
Query: 123 VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLD-SLQDSLLHNLDEQTVLSL 181
VE V DA+VP+++F+ GV +D+ +AQL +P+D+D + D+ L +DE+ LS+
Sbjct: 254 VEYHNNVIDAKVPIMQFEIQGVPIDISFAQLDVETLPDDIDKQIPDTHLTMMDERDKLSI 313
Query: 182 NGCRVTDRILSLVP--------NIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLV 233
NG R I+ V + + F+ +L+ ++ WA+ GIY N +G+LGGI+WALL+
Sbjct: 314 NGYRCNQAIIRYVTEHSEDKQQSKQRFQESLKVIKIWARNNGIYENRLGYLGGISWALLL 373
Query: 234 ARVCQLYPNALPNVLVSRFFKIFAHWKWPN-PVMLCPIQYQAMPHHVWDPRSNQRDRKHL 292
A++CQ++PN N ++ +FF ++ WKWP V+L P P Q+++K
Sbjct: 374 AKICQMFPNLEVNGIIEQFFLQYSSWKWPTMEVLLGPFS---------QPEERQKNQKFE 424
Query: 293 MPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELC-EEIEAGKRTWITLFEPYHFFGSF 351
M I TP+YP NS+ V L I+ + + A + EEI+ G+ W L + F +
Sbjct: 425 MSIYTPAYPEYNSTERVKKINLEIIDYKIKEANRIIQEEIKTGQAPWDRLIQEEDFLNKY 484
Query: 352 KNYLQIHIA----AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSV 407
+++I + + +F+ + + +L L + L+ R +P + +
Sbjct: 485 TKFIEIDLIRIERDETMREFKTQQDKLSVKLLTLFEFFSQKKPQELEIRPWPFFYKKKDQ 544
Query: 408 KSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQ 467
K + +G+ K + E++ + ++EF + M I V Q
Sbjct: 545 KYPQCSAFLIGIKAKSHIQ----EEYSFKNCIQEFAMQQRKSLDALTNCM-IRVFQATKQ 599
Query: 468 DIPDFVF 474
D+ D F
Sbjct: 600 DLNDIAF 606
>gi|391331065|ref|XP_003739971.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 493
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 126/375 (33%), Positives = 205/375 (54%), Gaps = 11/375 (2%)
Query: 17 TKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKL 76
T L ++L +K + E R EV+ R+ ++ W+ + KG+ E +L
Sbjct: 35 THSLRQLLYQQKQYECERRVSERHEVINRMLSFLRAWLFSMMESKGLR-EALNSMPTFRL 93
Query: 77 FTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRML-QETPLVEDLTPVPDARVP 135
FGS RLGV +DID V P + TR ++FF RML Q + + L+ +P A VP
Sbjct: 94 RQFGSLRLGVQDFYSDIDLCFVAPRWVTR-EEFFTGFPRMLEQYSHEITKLSVLPSAYVP 152
Query: 136 VIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNL--DEQTVLSLNGCRVTDRILSL 193
VI+ + + VD+++A+ + I +LD L + + +L D + V SLNG RVT+ +L
Sbjct: 153 VIRATCHDIQVDIVFARTEVDEISRELDLLAGANIESLISDIRCVRSLNGYRVTEMVLRF 212
Query: 194 VPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFF 253
VP R F+ L+ +R+WAK + IYS+ +G+LGG++WA+LVA+VC ++P A ++++FF
Sbjct: 213 VPRYRVFQLALKAIRYWAKCQKIYSHTLGYLGGVSWAILVAKVCTMFPKAGAARILNKFF 272
Query: 254 KIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTT 313
+ + W+WP PVML P Y + +W D +MPIITP YP NSS+NVS +T
Sbjct: 273 LVMSQWRWPEPVMLLPEGY-GVSSQLWSITQMPWD---IMPIITPVYPQQNSSFNVSKST 328
Query: 314 LRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNY--LQIHIAAKNAGDFRQWK 371
L +M+ + ++I + W + F P H +++Y LQ + + W
Sbjct: 329 LLVMKNALTEGVRITDDILMERCDWKSFFHPVHIADMYEHYVVLQTFRYTTDPHEKELWI 388
Query: 372 GWVESRLRQLIHMIE 386
VE +++ ++ I+
Sbjct: 389 MSVERSMKKFLNGID 403
>gi|401881479|gb|EJT45778.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 2479]
gi|406696602|gb|EKC99884.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 8904]
Length = 573
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 151/542 (27%), Positives = 262/542 (48%), Gaps = 91/542 (16%)
Query: 42 VLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPC 101
+L + +V ++ V++ G+S E+ EA +++T ++RLGV GP +DID +CV P
Sbjct: 41 LLSNIAQLVTKFVHDVSIKNGLS-EKVATEAGGRIYT-SAFRLGVHGPGSDIDTICVCPK 98
Query: 102 YATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPED 161
+ R + FFG+ +ML++ P +++ A VPV+K +GV VDLL+A++ +
Sbjct: 99 HVYR-EHFFGEFQQMLRDWPACTEIS---SAFVPVMKTVISGVEVDLLFARVNLPEAGDK 154
Query: 162 LDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAM 221
LD +D +L +D+ + SLN VTD IL+LVP++ FR+ LR +R WAK
Sbjct: 155 LDIEKDEILRGVDDASQRSLN---VTDMILNLVPDVATFRTALRTIRLWAK--------- 202
Query: 222 GFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWD 281
F GG+ WALL AR+CQLYPNA P+ +VS+FF I+ W
Sbjct: 203 SFPGGVAWALLTARICQLYPNAAPSTIVSKFFPIYYQW---------------------- 240
Query: 282 PRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITL 341
MP+ITP+YP S++N++ +T+ I++ E R K + +W+ L
Sbjct: 241 -----------MPVITPAYPSMCSTHNITQSTMTIIKNEMLRDKI----VNNPGSSWVEL 285
Query: 342 FEPYHFFGSFKNYLQIHIAAKNAGDFRQW-----------------KGWVESRLRQLIHM 384
F P FF ++ Y+Q+ +A +A D + W V + I +
Sbjct: 286 FTPVDFFSLYRTYVQVVASASSAQDLKDWLRTLVQDLEMTDNVLLAHPQVNGISKTYICL 345
Query: 385 IERDMGGVLQCRLYPG-------DFSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRL 437
E + Q L P D+++ ++F+GL ++ P+DG++ +L
Sbjct: 346 TEEEQAQASQGELPPEAMMRKEEDYADKEHTKVYTKNFFIGLDIEK--KPKDGQQ-PRQL 402
Query: 438 TVEEFKSHVVWMYSSW----KQGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIE 493
+ + SW +Q M + + + ++P F FP G +PPK K+ ++ +
Sbjct: 403 NLYYASKRFCFACQSWDKYNEQDMSVILRPCKRSELPAFCFPDG-QPPKKKKGKRAQQEK 461
Query: 494 VIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSVEPSTS-SVSSSTSASS 552
V ++ ++E G + Q++ ++ + + +S +P+ + V S+T A
Sbjct: 462 VGDAALATEAE---GGQTGSQQAGESAGEITDEQGPSKRSKAEPDPNGAVPVPSATGADP 518
Query: 553 RP 554
P
Sbjct: 519 AP 520
>gi|145505515|ref|XP_001438724.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405896|emb|CAK71327.1| unnamed protein product [Paramecium tetraurelia]
Length = 487
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/341 (35%), Positives = 187/341 (54%), Gaps = 14/341 (4%)
Query: 70 QEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPV 129
QE +L FGSYR G G +DID + + P R FF +L +L V +L +
Sbjct: 80 QEFAGELAVFGSYRFGANGKDSDIDLIILAPPQIDRELHFFQQLPSILSSNSKVTNLYCI 139
Query: 130 PDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDR 189
+A VP+I+FKF G+ DL++A + + + L S +DE++ SLNG +V+D
Sbjct: 140 QEAMVPLIRFKFAGIQFDLVFA-----CVKKIMKPLSQS--DPVDEKSSRSLNGLKVSDY 192
Query: 190 ILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLV 249
S + +++ S L+ ++ WA RGIY N MG+LGGI+W +L ++ QLYPN L+
Sbjct: 193 -FSKYCHQKSYLSFLKFIKAWAINRGIYGNVMGYLGGISWQILTHKIFQLYPNYSVQGLI 251
Query: 250 SRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKH-LMPIITPSYPCTNSSYN 308
RFF IF+ WKW P+ Q + Q+ ++H +M I+TP YP NS+YN
Sbjct: 252 ERFFFIFSQWKWNE----LPVVIQKCDEIWRNSLFEQQQKQHNVMSILTPVYPYINSAYN 307
Query: 309 VSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFR 368
VS+ T I++E+ + A + ++I + W L + FF + YLQI +KN D
Sbjct: 308 VSNCTFTIIEEQLKLANIIMQKICLSELQWSDLLKKIQFFDIYYTYLQIRALSKNKDDLI 367
Query: 369 QWKGWVESRLRQLIHMI-ERDMGGVLQCRLYPGDFSENSVK 408
QWK +ES+LR+L M+ E D+ ++ LYP F + V+
Sbjct: 368 QWKSHIESKLRKLNKMLDEGDVNKAIEFHLYPKSFQTDYVQ 408
>gi|145546083|ref|XP_001458725.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426546|emb|CAK91328.1| unnamed protein product [Paramecium tetraurelia]
Length = 550
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 206/363 (56%), Gaps = 16/363 (4%)
Query: 27 EKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGV 86
+ L A EE ++ L IVK W ++ +K I +E+ ++ +A L +GS LGV
Sbjct: 57 DSLQAIEENQQKSKDIQAYLGQIVKRWSQQCAKEKRI-NEDHLKYCSAVLLPYGSVLLGV 115
Query: 87 AGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSV 146
A +DID +C+ P + R + FF LF +L +E + + P+IK + G +
Sbjct: 116 ADSKSDIDLICIAPEFIDRREQFFNGLFYLLSNEQGMEQINKIESTSNPIIKMIYKGFHI 175
Query: 147 DLLYAQLQFSVIPEDLDSLQDSLLHNL---DEQTVLSLNGCRVTDRILSLVPNIRNFRST 203
D+ +AQL +PE++D D L NL +++++ +LNG + I +P+ F
Sbjct: 176 DINFAQLNSDRVPENIDDNLDELRRNLLQSEDKSMYALNGRKNGILISKSMPDHSQFVQA 235
Query: 204 LRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPN 263
LR ++ WAK+R + SN +G+LGGI+WA+L+A++CQL+P VS FF+I++ W W
Sbjct: 236 LRIIKQWAKKRKVSSNIIGYLGGISWAILMAKICQLFPRVDLCQTVSLFFQIYSQWNWKV 295
Query: 264 PVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQ- 322
PV++ + + + +++ D ++R+ K +M IITP+YP N+++ V T + + +EFQ
Sbjct: 296 PVVIDESEQEIICYYLQD--EDKRNDK-IMQIITPAYPFFNTTFKVHKITFQTIFQEFQI 352
Query: 323 RAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLI 382
A++L + W + P+ FF F+ ++ + I +K + +F +W G+ E++L +L+
Sbjct: 353 GAQKLGD--------WNEVLRPFDFFDCFQYFVALSIVSKTSENFHKWTGFCEAQLPKLL 404
Query: 383 HMI 385
++
Sbjct: 405 KLV 407
>gi|145551783|ref|XP_001461568.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429403|emb|CAK94195.1| unnamed protein product [Paramecium tetraurelia]
Length = 533
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 214/389 (55%), Gaps = 25/389 (6%)
Query: 47 DGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRH 106
+ IVK W ++ +K I +E+ ++ +A L +GS LGVA +DID +C+ P + R
Sbjct: 53 EKIVKKWSQQCAKEKRI-NEDHLKYCSAVLLPYGSVLLGVADSKSDIDLICIAPEFIDRR 111
Query: 107 DDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQ 166
+ FF LF +L +E + + P+IK + G +D+ +AQL +PE++D
Sbjct: 112 EQFFNGLFYLLSNEQGMEQINKIESTSNPIIKMIYKGFHIDINFAQLNSDRVPENIDDNL 171
Query: 167 DSLLHNL---DEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGF 223
D L NL +++++ +LNG + I +P+ F LR ++ WAK+R + SN +G+
Sbjct: 172 DELRRNLLQSEDKSLYALNGRKNGILISKSMPDHSQFVQALRIIKQWAKKRKVSSNIIGY 231
Query: 224 LGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCP-----IQYQAMPHH 278
LGGI+WA+L+A++CQL+P VS FF+I++ W W PV++ IQ +
Sbjct: 232 LGGISWAILMAKICQLFPRVDVCQTVSLFFQIYSQWNWKIPVVIDESEQDFIQIETFKTL 291
Query: 279 VWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQ-RAKELCEEIEAGKRT 337
W ++R+ K +M IITP+YP N+++ V+ T + + +EFQ A++L +
Sbjct: 292 CWKRDEDKRNDK-IMQIITPAYPFFNTTFKVNKITFQTIFQEFQIGAQKLGD-------- 342
Query: 338 WITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMG----GVL 393
W + P FF F+ ++ I I +K++ +F +W G+ E++L +L+ +I +
Sbjct: 343 WNEVLRPLDFFDCFQYFVAISIVSKSSENFHKWTGFCEAQLPKLLKLIGHNEAIYDNTSF 402
Query: 394 QCRLYPGDFSENSVKSSSQ-CHYFMGLGR 421
+ R+ P D EN + ++ YF+G+ +
Sbjct: 403 ELRITP-DGEENLERDYAKSLTYFLGIKK 430
>gi|108707804|gb|ABF95599.1| Poly polymerase central domain containing protein, expressed [Oryza
sativa Japonica Group]
Length = 550
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 132/405 (32%), Positives = 194/405 (47%), Gaps = 73/405 (18%)
Query: 13 DVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEA 72
D +K L + + S EE L R V+ LD IV W KRV D+ EQ
Sbjct: 78 DAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAKRVAYDQ----REQYWNT 133
Query: 73 NAKLFTFGSYRLG-----------------------VAGPSTDIDALCVGPCYATRHDDF 109
A + TFGSY LG GP +DIDA+CVGPC A+ F
Sbjct: 134 TATVLTFGSYALGEFPFEIFNISYCDKRCLKCSALKAYGPESDIDAVCVGPCIASLQHHF 193
Query: 110 FGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSL 169
F L +ML+E P V DL + +A+ + + L
Sbjct: 194 FIVLRQMLEERPEVSDLHSIENAKA---------------------------IHAFDPRL 226
Query: 170 LHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINW 229
L ++E + L+G RV +I+ L+PNI+ F+ LRCL+ WA++RG++ + +GF GI+
Sbjct: 227 LAAVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHL 286
Query: 230 ALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDR 289
A+L A VC ++P+A + L + FF IF+HW WP PV L Q P W P
Sbjct: 287 AILAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSLLD---QPTP---WRPHCCS--- 337
Query: 290 KHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCE----EIEAGKR----TWITL 341
MPI+ P P + +++ +T ++EE QR L + +E G R W L
Sbjct: 338 --FMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFALTKLGVCTVEQGDRNGDINWTEL 395
Query: 342 FEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIE 386
F P+ + +K++L+I ++A A + R W GWV+SR R L+ +E
Sbjct: 396 FAPFPYTVRYKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLE 440
>gi|308472139|ref|XP_003098298.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
gi|308269146|gb|EFP13099.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
Length = 343
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 190/355 (53%), Gaps = 50/355 (14%)
Query: 141 FNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNF 200
++G+ +D+L+A+L IPE++D DSLL NLDE ++ SLNG RV +++L LVPN F
Sbjct: 3 YSGIELDVLFARLDKPTIPENIDLSDDSLLVNLDESSIRSLNGIRVAEQLLKLVPNRDTF 62
Query: 201 RSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWK 260
+LR ++ WAK G+YSNAMGF GGI WA+LVA+ CQLYPNA P+ ++ + F +F+ WK
Sbjct: 63 CQSLRAIKLWAKNHGVYSNAMGFFGGITWAILVAKTCQLYPNAAPSKIIQKVFFVFSTWK 122
Query: 261 WPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEE 320
WP+PV+L + C +S +TL I+QEE
Sbjct: 123 WPSPVVL------------------------------KQFGCVDSKLANLKSTLHIIQEE 152
Query: 321 FQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQ 380
+ A E+C++I+ G TW LFE +FF +K+++ + I G+ ES++RQ
Sbjct: 153 MKSALEICDQIQKGNATWNDLFEEINFFSRYKHFVALTINEDTN------IGFFESKIRQ 206
Query: 381 LIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVE 440
L+ +IER+ V + P +S+ +F+GL ++ + D+ +E
Sbjct: 207 LVQIIERN-SQVKTAHINPRKLKNIRNEST----WFLGLE-----FTENAKNLDLTSEIE 256
Query: 441 EFKSHVVWMYSSWKQG-MQIHVSHLRCQDIPDFVFPGGV---RPPKSLNEKKRKR 491
FK ++ S G +Q+ ++++ D+ F+ G + R KS RKR
Sbjct: 257 GFKRNMARQQSKGIVGQIQLDATYVKRSDLIKFISLGDLKRGRFVKSKTAANRKR 311
>gi|440789895|gb|ELR11186.1| Poly(A) polymerase central domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1230
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/349 (35%), Positives = 188/349 (53%), Gaps = 35/349 (10%)
Query: 76 LFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVP 135
L GS ++GV +D+DALCVGP + FF +L L++T ++ V DA+VP
Sbjct: 778 LHLLGSCQMGVQTADSDVDALCVGPDTMS-CSRFFMELRVALEKTKKLQSAREVHDAKVP 836
Query: 136 VIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVP 195
V+K + NGV VDLLY SV + D L + + S++GCR D IL VP
Sbjct: 837 VLKLQINGVEVDLLYGPYPSSVPITPPSQIDDRSLRKFEPAVLRSISGCRDGDAILRSVP 896
Query: 196 NIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVC---QLYPN---------- 242
N+ +F++ LR ++ WAKRRG+YSNA+GFLGG +W++LVA VC +LY
Sbjct: 897 NVSHFQTVLRAVKLWAKRRGLYSNAVGFLGGFSWSVLVAYVCKNSKLYAKSAAAASGDGD 956
Query: 243 -ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
++ L++ FF+++ HW W PV + P + P H D MPI+TP+ P
Sbjct: 957 LSIEERLLAEFFEVYNHWDWQQPVAITPGSARYKPGHKSDK----------MPIVTPTPP 1006
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWIT-LFEPYHFFGSFKNYLQIHIA 360
NS+ NV+ +TL MQ+EF RA ++ + + + L +P +FF + YL + +
Sbjct: 1007 FNNSARNVARSTLTEMQQEFFRAFDITQASQWNSEAGLNDLLQPTNFFKDYHYYLMVEVH 1066
Query: 361 AKNAGDFRQWK-------GWVESRLRQLIHMIERDMGGVLQCRLYPGDF 402
+ ++ + +W GW+ESRL LI +E++ R +PG F
Sbjct: 1067 SLSSDEVTKWPTNFSLSLGWLESRLIALIFDLEKNPQTY--ARPFPGTF 1113
>gi|402468353|gb|EJW03519.1| hypothetical protein EDEG_00201 [Edhazardia aedis USNM 41457]
Length = 1051
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 155/227 (68%), Gaps = 5/227 (2%)
Query: 123 VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLN 182
+ +L + DA VP+IKF+ N +S+DLL+ ++ +L+ L D+LL N+D++++LS+N
Sbjct: 615 ITNLHKIEDAYVPLIKFEINYISIDLLFTRVP-LPSLSNLNLLDDTLLKNMDDKSILSIN 673
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
G RVTD +++LVPN++ F S LR +++WAKRRGIY N+ G+ GG+ +A+LVAR+CQ YPN
Sbjct: 674 GSRVTDMLINLVPNVKVFHSALRAIKYWAKRRGIYGNSFGYPGGVAYAILVARICQYYPN 733
Query: 243 ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
++ +FF+I+++WKWPNPV+L + +WDP+ +Q DR H MPIITP+YP
Sbjct: 734 KDSYTILYKFFEIYSNWKWPNPVLLKHNVDRNFNLKIWDPKVHQTDRMHKMPIITPAYPS 793
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG 349
S++NV++TTL ++ EE +R C +I + + F+ FG
Sbjct: 794 ICSTHNVTNTTLGVINEELKR----CLDIFKESKNIDSSFDETKIFG 836
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 19/116 (16%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S S ++D+ ++ + LV F + ++S+ R VLG L + + K
Sbjct: 13 LSMSGSKLIDMYKSQIINDFLVKSNFFEAHQDSVSRERVLGYLSFLADKFCK-------- 64
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE 119
K+FTFGSYRLGV DID L V T DFF F ML+E
Sbjct: 65 ----------GKIFTFGSYRLGVHQKGADIDTLLVSASDVTLI-DFFNGFFEMLKE 109
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 14/89 (15%)
Query: 341 LFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIER----DMGGVLQCR 396
LF+ FF +K YL I + + +WKG++ES++R L +E +G +++
Sbjct: 896 LFQQSDFFKKYKFYLNIKLTNDD-----KWKGFIESKIRLLCAKLENSEGFSIGYMIKAV 950
Query: 397 LYPGDFSENSVKSSSQCHYFMGLGRKQGV 425
+P F N H+F+GL K +
Sbjct: 951 PFPQSFVYNDF-----VHFFVGLDYKDRI 974
>gi|9453842|dbj|BAB03277.1| poly A polymerase [Drosophila melanogaster]
Length = 255
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/224 (45%), Positives = 145/224 (64%), Gaps = 2/224 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P D+ T EL L +F S++E R+E+L +L+ +VK W+K +++ K +
Sbjct: 34 ISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLVKQWVKEISVSKNM 93
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E ++ K++TFGSYRLGV DIDALCV P R D+F F +L++ P V
Sbjct: 94 P-ESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIER-TDYFQSFFEVLKKQPEV 151
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ V +A VPVIK F+G+ +DLL+A+L IP+D D D+LL NLD ++V SLNG
Sbjct: 152 TECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNG 211
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGI 227
CRVTD IL+LVPNI NFR LR ++ WAK+ GIYSN++G+ GG+
Sbjct: 212 CRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 255
>gi|51900536|gb|AAU13916.1| PAP alpha [Candida dubliniensis]
Length = 360
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 122/359 (33%), Positives = 191/359 (53%), Gaps = 44/359 (12%)
Query: 193 LVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRF 252
LVP F+ LRC++ WA++R +Y N GF GG+ WA+LVAR+CQLYPNA+ +V+V +F
Sbjct: 1 LVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSSVIVEKF 60
Query: 253 FKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSST 312
F I+ W WP PV+L I+ + VW+PR DR H MP+ITP+YP +++N++S+
Sbjct: 61 FNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCATHNITSS 120
Query: 313 TLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA-KNAGDFRQWK 371
T +++ E R + ++I AGK++W LFE + FF +K YL + A +A + ++W
Sbjct: 121 TQKVILAELSRGSSIMQDIHAGKKSWSDLFEKHCFFYKYKFYLCVVAATIDSAEEHKKWS 180
Query: 372 GWVESRLRQLIHMIERDMGGVLQCRLYPGDFSE-------------NSVKSSSQ------ 412
G++ES+LRQL+ +E GV Y DFS NS + S
Sbjct: 181 GFIESKLRQLVLKLEV-AEGVEIAHPYVKDFSHTFLLDDKNAEDIINSYGTLSGEAFLRT 239
Query: 413 ------------------CHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWK 454
Y++GL S K D++ EF S + +S+
Sbjct: 240 LHSSDSDKDSDEHNKIRLTKYYIGLDLNLTKSSDGVRKLDIQYPCAEFYS-ICKGSTSFT 298
Query: 455 QGMQ-IHVSHLRCQDIPDFVFPGG-VRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHS 511
+G+ I + +++ D+P+ V+ G RP KS KKRK++ + K ++ESS + S
Sbjct: 299 EGVNFIQIKNVKLHDLPNDVYEDGEERPIKS--GKKRKKVIKEDGQKRVRNESSASSAS 355
>gi|82655167|emb|CAJ43765.1| poly(A) polymerase alpha [Oncorhynchus mykiss]
Length = 167
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 96/167 (57%), Positives = 120/167 (71%)
Query: 132 ARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRIL 191
A VPVIK F+ + +D+L+A+L IPE+LD D LL NLD + + SLNGCRVTD IL
Sbjct: 1 AVVPVIKLSFDSIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEIL 60
Query: 192 SLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSR 251
LVPNI NFR TLR ++ WAKR IYSN +GFLGG++WA+LVAR CQLYPNA+ + LV +
Sbjct: 61 HLVPNIENFRLTLRTIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVHK 120
Query: 252 FFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITP 298
FF +F+ W+WPNPV+L + + VW PR DR HLMPIITP
Sbjct: 121 FFLVFSKWEWPNPVLLKQPEDCNLNLPVWGPRVTPSDRYHLMPIITP 167
>gi|219887573|gb|ACL54161.1| unknown [Zea mays]
gi|414888169|tpg|DAA64183.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888170|tpg|DAA64184.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 482
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 183/371 (49%), Gaps = 69/371 (18%)
Query: 17 TKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKL 76
+ L + L DE S E+ R +V+ L IV W V ++ + A A +
Sbjct: 82 SSSLVQFLKDEGAVLSPEDENKREKVIRELKKIVMHWANAVAYEQSVPQ----GLATATV 137
Query: 77 FTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPV 136
T+GSY LG GP +DID LC+GPC AT FF L ++LQ P V ++ V A+VP+
Sbjct: 138 LTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSEVHTVEKAKVPL 197
Query: 137 IKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPN 196
++F+F G++VDL YAQL + +++ LL +D ++ SL+G RV ++I+ LVPN
Sbjct: 198 MRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVRVNEQIVQLVPN 257
Query: 197 IRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIF 256
F++ LRC++ WA++RG++ + +GF GI+ A+L A VC+ +P+A + L + FF+ F
Sbjct: 258 AEKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTF 317
Query: 257 AHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRI 316
AHW P V DP
Sbjct: 318 AHW----------------PWQVPDP---------------------------------- 327
Query: 317 MQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVES 376
++ +FQ W LFEP+ + ++ +L+I + A + W GWV+S
Sbjct: 328 LRHDFQ---------------WSWLFEPFPYDQKYQQFLRIALRAPTIAELGDWAGWVKS 372
Query: 377 RLRQLIHMIER 387
R R LI +ER
Sbjct: 373 RFRFLILKLER 383
>gi|294943027|ref|XP_002783739.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239896395|gb|EER15535.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 274
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 157/271 (57%), Gaps = 22/271 (8%)
Query: 108 DFFGKLFRM-LQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQ 166
D F +LF + L E V +L PVP A VPVIK KF GV VD+LY L + +D
Sbjct: 4 DAFFELFPLKLSELNDVTNLNPVPQAAVPVIKMKFMGVDVDVLYCGLAHPLSGPAIDPAD 63
Query: 167 DSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGG 226
D+LL +DE++ S+NG RV+D I + VP+ +F LR +R WA+RRGIYSNA+G+LGG
Sbjct: 64 DNLLCGMDEKSARSINGVRVSDAIKTCVPHFAHFLGALRVIRAWARRRGIYSNALGYLGG 123
Query: 227 INWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQY------QAMPHH-V 279
++WA+LVARVCQL+PN P+ LV RFF++++ W W +++ + HH V
Sbjct: 124 VSWAILVARVCQLFPNMGPSQLVVRFFRVYSRWNWDPSEGAVVLRHSEQRNGEGFQHHKV 183
Query: 280 WDPRSNQRDRKHLMP-------IITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIE 332
W P + +P +ITP+YP NS++ V+ ++ +++E +R +
Sbjct: 184 WCPPPKRTTTDQPLPLAASPMAVITPAYPSMNSTFGVTRMSMDTIKKELERGAGIISSKG 243
Query: 333 AGKRT---WITLFEPYHFF----GSFKNYLQ 356
R+ W TL EP HFF G +K +LQ
Sbjct: 244 VDLRSRECWETLLEPIHFFDYDQGGYKQFLQ 274
>gi|429964357|gb|ELA46355.1| hypothetical protein VCUG_02160 [Vavraia culicis 'floridensis']
Length = 708
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/225 (43%), Positives = 143/225 (63%), Gaps = 6/225 (2%)
Query: 144 VSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRST 203
+ +DL++A+L I L+ L SLL NLDE++VLSLNG RVTD ILSLVPN + F
Sbjct: 314 IKIDLVFARLNVFKIDSSLNLLDSSLLKNLDEKSVLSLNGNRVTDEILSLVPNKKVFHGA 373
Query: 204 LRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPN 263
LRC+++WAKRRG+ + G+ GG+ +A+ VAR+CQL+PN ++ ++F+++ WKWP
Sbjct: 374 LRCIKYWAKRRGLTGHLYGYFGGVAYAISVARICQLFPNMCEYTMICKYFELYKEWKWPT 433
Query: 264 PVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQR 323
PVML I+ VWDP+ + D+ H MP+ITPSYP S++N+ ++T++ +EE +R
Sbjct: 434 PVMLKKIENLNYNLKVWDPKIHPSDKFHKMPVITPSYPSMCSTHNIINSTMKRYKEELER 493
Query: 324 AKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI--AAKNAGD 366
L E GK W F FF +K++L + I K AGD
Sbjct: 494 GHRLLAE---GKE-WKEFFRSTDFFQRYKSFLAVFILLKRKRAGD 534
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 81/135 (60%), Gaps = 4/135 (2%)
Query: 13 DVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEA 72
D+ + L+ L+ K++ + EE++ R VLGRL + ++IK + KG++D + I+ A
Sbjct: 24 DIARSSSLQAFLLSSKIYETNEEAITRERVLGRLSYMFDNFIKAIGTKKGLTDSD-IKAA 82
Query: 73 NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDA 132
+ +++TFGSYRLGV +DID LCV P Y R +FF + + ML + + ++ V DA
Sbjct: 83 SGRIYTFGSYRLGVHARGSDIDTLCVAPVYVDRK-EFFEEFYSMLSD--VFAEVEKVEDA 139
Query: 133 RVPVIKFKFNGVSVD 147
VP+++ + +D
Sbjct: 140 YVPLMQLVYREHRID 154
>gi|440493736|gb|ELQ76169.1| Poly(A) polymerase, nucleotidyltransferase [Trachipleistophora
hominis]
Length = 696
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/277 (38%), Positives = 159/277 (57%), Gaps = 29/277 (10%)
Query: 135 PVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLV 194
P + K + +DL++A+L I L+ L SLL NLDE++VLSLNG RVTD ILSLV
Sbjct: 316 PGLNKKMVEIKIDLVFARLNLFKIDGSLNLLDSSLLKNLDEKSVLSLNGNRVTDEILSLV 375
Query: 195 PNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFK 254
PN F LRC+++WAKRR + + G+ GG+ +A+ VAR+CQL+PN ++ ++F+
Sbjct: 376 PNKTVFHGALRCIKYWAKRRALTGHLYGYFGGVAYAISVARICQLFPNVCEYTIICKYFE 435
Query: 255 IFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTL 314
++ WKWP PVML I+ VWDP+ + D+ H MP+ITPSYP S++N+ ++T+
Sbjct: 436 LYKEWKWPMPVMLKKIENLNYNLKVWDPKIHPSDKFHKMPVITPSYPSMCSTHNIMNSTM 495
Query: 315 RIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAG-----DFR- 368
+ +EE +RA +L +E + W F FF ++++L + I KNAG D R
Sbjct: 496 KRYKEELERAHKLL--VEGAE--WNEFFRGTDFFQRYRSFLAVFILLKNAGCTTNNDARS 551
Query: 369 -------------------QWKGWVESRLRQLIHMIE 386
W+G V SR+R L +E
Sbjct: 552 EQEITNEQASGAKETSMHKMWQGHVNSRIRFLSTKLE 588
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 78/129 (60%), Gaps = 4/129 (3%)
Query: 13 DVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEA 72
D+ T L LV K++ ++EE++ R VLGRL + ++IK + KG++D + I+ A
Sbjct: 24 DIARTSSLHAFLVSSKIYDTDEEAIIRERVLGRLSYMFDNFIKAIGTKKGLADSD-IRTA 82
Query: 73 NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDA 132
+++TFGSYRLGV +DID LCV P Y R +FF + + ML + + ++ V DA
Sbjct: 83 TGRIYTFGSYRLGVHARGSDIDTLCVAPVYVDRK-EFFEEFYVMLND--VFAEVEKVEDA 139
Query: 133 RVPVIKFKF 141
VP+++ +
Sbjct: 140 YVPLMQLVY 148
>gi|119620437|gb|EAX00032.1| poly(A) polymerase gamma, isoform CRA_d [Homo sapiens]
Length = 430
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 205/384 (53%), Gaps = 26/384 (6%)
Query: 221 MGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVW 280
+GFLGG++WA+LVAR CQLYPNA + LV +FF +F+ W+WPNPV+L + + VW
Sbjct: 2 LGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVW 61
Query: 281 DPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWIT 340
DPR N DR HLMPIITP+YP NS+YNVS++T +M EEF++ + +EI GK W
Sbjct: 62 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSK 121
Query: 341 LFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRL 397
L EP +FF +++Y+ + +A + +W G VES++R L+ +ER+ L +
Sbjct: 122 LLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQS 181
Query: 398 YPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WK 454
+PG+ E+ ++ +F+G+ ++ V + D+ ++ F V ++ K
Sbjct: 182 FPGN-KEHHKDNNYVSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLK 239
Query: 455 QGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRI-EVIESTKLKKSESSTAGHSSG 513
+GM+I +H++ + + ++ P + L +KK++ + +V S+ +S+ + S
Sbjct: 240 EGMKIEATHVKKKQLHHYL------PAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCL 293
Query: 514 QKSSQTESGVALDGSHGLKSGPSVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQ 573
S T++G + P++ S S S + R ++ E + +Q
Sbjct: 294 DSSRDTDNGTPFNS-----------PASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQ 342
Query: 574 AQNFNQVGATVAAALATGTISSFC 597
+ +GA V + + T + + C
Sbjct: 343 GLSIPVIGAKVDSTVKTVSPPTVC 366
>gi|413955903|gb|AFW88552.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
Length = 370
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 100/253 (39%), Positives = 148/253 (58%), Gaps = 4/253 (1%)
Query: 12 LDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQE 71
+D ++ L K + + + S E+ R V+ L IV DW +RV ++G +Q
Sbjct: 68 MDECRSRSLLKFISNAGIEPSLEDERRRERVVRELGKIVMDWARRVAYEQG----KQHWI 123
Query: 72 ANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPD 131
+A + TFGSY LG GP +DID LC+GP A+ FF L +ML+ P V +L +
Sbjct: 124 TSATVLTFGSYALGAYGPESDIDVLCIGPYIASLQHHFFVVLRQMLEGRPEVSELHSIEG 183
Query: 132 ARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRIL 191
A+VP+++FKFNG+ VD Y QL E + + +L N+D + L+G R +I+
Sbjct: 184 AKVPLMRFKFNGILVDFPYVQLPVINAAEAMHAFDPHVLENVDGPSWRCLSGVRANRQII 243
Query: 192 SLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSR 251
LVPN++ F+ LRCL+ WA++RG+ + +GF GI+ A+L A VC+ +PNA N L+S
Sbjct: 244 QLVPNMKKFQYLLRCLKLWARKRGLDCHLLGFFAGIHLAILAAYVCRRHPNASINTLLSL 303
Query: 252 FFKIFAHWKWPNP 264
FF IF HW WP P
Sbjct: 304 FFDIFVHWPWPLP 316
>gi|440294386|gb|ELP87403.1| polyA polymerase, putative [Entamoeba invadens IP1]
Length = 482
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 223/418 (53%), Gaps = 32/418 (7%)
Query: 17 TKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK-GISDEEQIQEANAK 75
T EL L ++ + EE R + + L+ +V+ W K++ + K G S+ + AK
Sbjct: 2 TDELRGYLEKNGMYPTPEEKKEREKAISYLNEVVEKWGKKIYISKTGTSENTDV--CAAK 59
Query: 76 LFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVP 135
+FT+GSYRL V G + DIDA CV +DFF L+ L+ P V ++ + R P
Sbjct: 60 IFTYGSYRLDVYGNNADIDA-CVVTNSTIEREDFFNDLYEDLKNNPDVREIRQIKSVRAP 118
Query: 136 VIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVP 195
++ + + +DL +A+ + +P+++D L + +L +DE + ++NG R TD I + VP
Sbjct: 119 ILTMTYMKIDIDLNFARTAHTTLPKEMDILSERILDEMDELSTRAINGRRNTDMINNFVP 178
Query: 196 --NIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV-LVSRF 252
++ F+ +R ++ W+K+RGIY +L GI+ +LVA+V L NV L+ +F
Sbjct: 179 PHSVEAFKVIVRAIKMWSKKRGIYGYVYSYLNGISIEILVAQVIS-ENYQLDNVRLLEKF 237
Query: 253 FKIFAHWKWP-NPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSS 311
F +A W W NPVML V D R +R ++ ++ +ITP+ P NS YN++
Sbjct: 238 FHAYATWDWARNPVMLG----------VSDDRP-ERKKEEMVQVITPAAPRENSMYNMTR 286
Query: 312 TTLRIMQEEFQRAKELCEEIEA-GKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQW 370
++L +++ E R + + + ++ G W LF+ H F + Y+ + + + + + +
Sbjct: 287 SSLELLKREMLRGERIVKGYKSEGGNDWNLLFKKRHCFCGY--YIFVEFSVRGSLESLEN 344
Query: 371 K-GWVESRLRQLIHMIERDMGGVLQCRLYPGDF--SENSVKSSSQCHYFMGLGRKQGV 425
K G ES++ + + +E +M V++ + P + EN+V +Y++G+ K+ +
Sbjct: 345 KIGMFESKIVRFVRSLE-EMEEVIEVNVIPEGYLEVENAVD-----YYYVGMNVKKDL 396
>gi|67481711|ref|XP_656205.1| poly(A) polymerase [Entamoeba histolytica HM-1:IMSS]
gi|74890661|sp|Q51D88.1|PAP_ENTHI RecName: Full=Poly(A) polymerase; Short=PAP; AltName: Full=EhPAP;
AltName: Full=Polynucleotide adenylyltransferase
gi|56473392|gb|EAL50821.1| poly(A) polymerase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709651|gb|EMD48877.1| poly(A) polymerase, putative [Entamoeba histolytica KU27]
Length = 522
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 219/411 (53%), Gaps = 25/411 (6%)
Query: 19 ELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK-GISDEEQIQEANAKLF 77
EL++ LV ++ ++ + + + ++ ++ W K++ ++ G++D+ ++ A ++
Sbjct: 4 ELKEFLVKNDMYPMGDQVEKKRKAISKMTEYIQQWGKKIYIESAGVADDTDVKAAT--IY 61
Query: 78 TFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVI 137
+GSYRL V G ++DIDA V TR DDF+ L+ L P V++L +P R P +
Sbjct: 62 VYGSYRLNVYGNNSDIDACIVSNSTITR-DDFYDGLYAELLNNPDVKELKQIPSKRSPHL 120
Query: 138 KFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNI 197
+ + DL +++ ++ +P++LD L +++L N+DE ++NG R TD I + VPN
Sbjct: 121 SMIYLNIEFDLNFSRTAYTSLPDNLDILNENILKNMDELDTRAINGVRNTDIIDAFVPNH 180
Query: 198 RN--FRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV-LVSRFFK 254
FR +R ++ W K+RGIY FL GI+ +LVA+V L NV L+ +FF+
Sbjct: 181 SEEAFRVMVRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVIS-ENYQLDNVRLLEKFFQ 239
Query: 255 IFAHWKW-PNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTT 313
+++ W W PVML + N + ++ ++ I+TP+ P N++++++ +
Sbjct: 240 VYSSWDWLRTPVMLGT-----------NDDFNDKKKEGVIQILTPASPSENAAFSITKFS 288
Query: 314 LRIMQEEFQRAKELCEEIEA-GKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKG 372
L +++ E +R +E+ E + G W LF+P H F + +++ + + + G
Sbjct: 289 LEMIKRELKRGQEIVHEFSSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEGLTTTIG 348
Query: 373 WVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
ES L L+ + ++ +++ + P F + + + + Y++G+ K+
Sbjct: 349 KFESGLVNLMKGLS-EIEEIIEANVIPNGFLD---EENEKYFYYVGMNVKR 395
>gi|407036560|gb|EKE38225.1| poly(A) polymerase, putative [Entamoeba nuttalli P19]
Length = 522
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 219/411 (53%), Gaps = 25/411 (6%)
Query: 19 ELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK-GISDEEQIQEANAKLF 77
EL++ LV ++ ++ + + + ++ ++ W K++ ++ G++D+ ++ A ++
Sbjct: 4 ELKEFLVKNDMYPMGDQVEKKRKAISKMTEYIQQWGKKIYIESAGVADDTDVKAAT--IY 61
Query: 78 TFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVI 137
+GSYRL V G ++DIDA V TR DDF+ L+ L P V++L +P R P +
Sbjct: 62 VYGSYRLNVYGNNSDIDACIVSNSTITR-DDFYDGLYAELLNNPDVKELKQIPSKRSPHL 120
Query: 138 KFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNI 197
+ + DL +++ ++ +P++LD L +++L N+DE ++NG R TD I + VPN
Sbjct: 121 SMIYLNIEFDLNFSRTAYTSLPDNLDILNENILKNMDELDTRAINGVRNTDIIDAFVPNH 180
Query: 198 RN--FRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV-LVSRFFK 254
FR +R ++ W K+RGIY FL GI+ +LVA+V L NV L+ +FF+
Sbjct: 181 SEEAFRVMVRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVIS-ENYQLDNVRLLEKFFQ 239
Query: 255 IFAHWKW-PNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTT 313
+++ W W PVML + N + ++ ++ I+TP+ P N++++++ +
Sbjct: 240 VYSSWDWLRTPVMLGT-----------NDDFNDKKKEGIIQILTPASPSENAAFSITKFS 288
Query: 314 LRIMQEEFQRAKELCEEIEA-GKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKG 372
L +++ E +R +E+ E + G W LF+P H F + +++ + + + G
Sbjct: 289 LEMIKRELKRGQEIVHEFSSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEGLTTTIG 348
Query: 373 WVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
ES L L+ + ++ +++ + P F + + + + Y++G+ K+
Sbjct: 349 KFESGLVNLMKGLS-EIEEIIEANVIPNGFLD---EENERYFYYVGMNVKR 395
>gi|167393770|ref|XP_001740701.1| poly(A) polymerase [Entamoeba dispar SAW760]
gi|165895071|gb|EDR22875.1| poly(A) polymerase [Entamoeba dispar SAW760]
Length = 521
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 219/411 (53%), Gaps = 25/411 (6%)
Query: 19 ELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK-GISDEEQIQEANAKLF 77
EL++ LV ++ ++ + + + ++ ++ W K++ ++ G++D+ ++ A ++
Sbjct: 4 ELKEFLVKNDMYPMGDQVEKKRKAISKMTEYIQQWGKKIYIESAGVADDTDVRAAT--IY 61
Query: 78 TFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVI 137
+GSYRL V G ++DIDA V TR DDF+ L+ L P V++L +P R P +
Sbjct: 62 VYGSYRLNVYGNNSDIDACIVSNSTITR-DDFYDGLYAELLNNPDVKELKQIPSKRSPHL 120
Query: 138 KFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNI 197
+ + DL +++ ++ +P++LD L +++L N+DE ++NG R TD I + VPN
Sbjct: 121 SMIYLNIEFDLNFSRTAYTSLPDNLDILNENILKNMDELDTRAINGVRNTDIIDAFVPNH 180
Query: 198 RN--FRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV-LVSRFFK 254
FR +R ++ W K+RGIY FL GI+ +LVA+V L NV L+ +FF+
Sbjct: 181 SEEAFRVMVRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVIS-ENYQLDNVRLLEKFFQ 239
Query: 255 IFAHWKWPN-PVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTT 313
+++ W W PVML + N + ++ ++ I+TP+ P N++++++ +
Sbjct: 240 VYSSWDWLRAPVMLGT-----------NDDFNDKKKEGVIQILTPASPSENAAFSITKFS 288
Query: 314 LRIMQEEFQRAKELCEEIEA-GKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKG 372
L +++ E +R +E+ E + G W LF+P H F + +++ + + + G
Sbjct: 289 LELIKRELKRGQEIVHEFSSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEGLTTTIG 348
Query: 373 WVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQ 423
ES L L+ + ++ +++ + P F + + + + Y++G+ K+
Sbjct: 349 KFESGLVNLMKGLS-EIEEIVEANVIPNGFLD---EENEKYFYYVGMNVKR 395
>gi|402697301|gb|AFQ90838.1| polyA polymerase alpha, partial [Dendropicos gabonensis]
Length = 170
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 121/169 (71%), Gaps = 1/169 (0%)
Query: 91 TDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLY 150
DIDALCV P + R DFF + L++ V+DL V +A VPVIK F+G+ +D+L+
Sbjct: 3 ADIDALCVAPRHVER-SDFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILF 61
Query: 151 AQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFW 210
A+L IPEDLD DSLL NLD + + SLNGCRVTD IL LVPNI NFR TLR ++ W
Sbjct: 62 ARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLW 121
Query: 211 AKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHW 259
AKR IYSN +GFLGG++WA+LVAR CQLYPNA+ + LV +FF +F+ W
Sbjct: 122 AKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|115474207|ref|NP_001060702.1| Os07g0688500 [Oryza sativa Japonica Group]
gi|113612238|dbj|BAF22616.1| Os07g0688500 [Oryza sativa Japonica Group]
Length = 447
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 174/373 (46%), Gaps = 60/373 (16%)
Query: 12 LDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQE 71
+D T L + L DE S E R +V+ +L+ IV DW K V ++ + +
Sbjct: 59 MDSRRTTSLLQFLKDEGGIPSPEADKKREQVIRKLNKIVMDWAKVVAYEQRVPP----RR 114
Query: 72 ANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPD 131
A A + T+GSY LG GP +DIDALCVGPC AT FF L ++L++ P V +L V
Sbjct: 115 ATATVLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVSELQTVES 174
Query: 132 ARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRIL 191
A+ + LL LD + SL+G RV ++I+
Sbjct: 175 AKAIITS---------------------------NPHLLQKLDSLSWRSLSGVRVNEQIV 207
Query: 192 SLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSR 251
LVPN + F+ LRC++ WAKRRGI+ + +GF GI+ A+L A VCQ YP NV +
Sbjct: 208 QLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGTINVSLHG 267
Query: 252 FFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSS 311
P + +R MPI+ P P + N++
Sbjct: 268 -----------------------------QPTNCRRPDGSFMPILLPCTPPEFCTSNMTK 298
Query: 312 TTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWK 371
T + ++EE R L +E W+ LF P+ + ++ +L+I + A + + R W
Sbjct: 299 GTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELRDWA 358
Query: 372 GWVESRLRQLIHM 384
GWV+SR ++ +
Sbjct: 359 GWVKSRFNLILKL 371
>gi|340546035|gb|AEK51816.1| poly(A) polymerase alpha [Heteronotia binoei]
Length = 170
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 120/169 (71%), Gaps = 1/169 (0%)
Query: 91 TDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLY 150
DIDALCV P + R DFF + L+ V+DL V +A VPVIK F+G+ +D+L+
Sbjct: 3 ADIDALCVAPRHVDR-SDFFTSFYEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILF 61
Query: 151 AQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFW 210
A+L IPEDLD DSLL NLD + + SLNGCRVTD IL LVPNI NFR TLR ++ W
Sbjct: 62 ARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLW 121
Query: 211 AKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHW 259
AKR IYSN +GFLGG++WA+LVAR CQLYPNA+ + LV +FF +F+ W
Sbjct: 122 AKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|402697299|gb|AFQ90837.1| polyA polymerase alpha, partial [Cyrtodactylus sp. JJF-2012]
Length = 170
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 120/169 (71%), Gaps = 1/169 (0%)
Query: 91 TDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLY 150
DIDALCV P + R DFF + L+ V+DL V +A VPVIK F+G+ +D+L+
Sbjct: 3 ADIDALCVAPRHVDR-SDFFTSXYEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILF 61
Query: 151 AQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFW 210
A+L IPEDLD DSLL NLD + + SLNGCRVTD IL LVPNI NFR TLR ++ W
Sbjct: 62 ARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLW 121
Query: 211 AKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHW 259
AKR IYSN +GFLGG++WA+LVAR CQLYPNA+ + LV +FF +F+ W
Sbjct: 122 AKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|310817728|ref|YP_003950086.1| endonuclease/exonuclease/phosphatase domain-containing protein
[Stigmatella aurantiaca DW4/3-1]
gi|309390800|gb|ADO68259.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella
aurantiaca DW4/3-1]
Length = 1024
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 163/323 (50%), Gaps = 20/323 (6%)
Query: 75 KLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARV 134
+L+ +GS+ +G +G +D+DA+ +GP + +R +DF G L + L + E + DA +
Sbjct: 643 ELYPYGSFLMGTSGTGSDVDAVVIGPAHLSR-EDFAGALLQALTQEKDCEGARFIADAAI 701
Query: 135 PVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLV 194
P++K GV D+ YA V P L LD SL G TD +L V
Sbjct: 702 PLVKLSLGGVHFDVSYASRPEGVAPCPPAELLARQGERLDLAGFRSLTGWADTDALLECV 761
Query: 195 ----PNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP---NALPNV 247
++ FR+ LR ++ WAK RG+YS+A+G+LGG +WA+L A C P +
Sbjct: 762 GREEADLERFRTLLRAVKTWAKARGVYSHALGYLGGFSWAVLTAWACMRAPRDSSRTEEQ 821
Query: 248 LVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSY 307
L+ FF++FA W WP PV L P + +P +RD+ MP++ P+ P N++
Sbjct: 822 LLDYFFEMFAAWPWPLPVTLTPGTARYVP-------EGKRDQ---MPVVAPALPPRNTAR 871
Query: 308 NVSSTTLRIMQEEFQRAKELCEEI--EAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAG 365
NVS +TLR+++EE RA E E W LF P G + + + AK
Sbjct: 872 NVSRSTLRVLREELARASEALRRARQEGTAEAWDALFAPVEIPGPTAAQVVVSVEAKAHE 931
Query: 366 DFRQWKGWVESRLRQLIHMIERD 388
D + GW+ L L++ +E D
Sbjct: 932 DRQVAAGWILGHLTALVYRLEGD 954
>gi|115378897|ref|ZP_01466034.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
gi|115364103|gb|EAU63201.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
Length = 1080
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 163/323 (50%), Gaps = 20/323 (6%)
Query: 75 KLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARV 134
+L+ +GS+ +G +G +D+DA+ +GP + +R +DF G L + L + E + DA +
Sbjct: 699 ELYPYGSFLMGTSGTGSDVDAVVIGPAHLSR-EDFAGALLQALTQEKDCEGARFIADAAI 757
Query: 135 PVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLV 194
P++K GV D+ YA V P L LD SL G TD +L V
Sbjct: 758 PLVKLSLGGVHFDVSYASRPEGVAPCPPAELLARQGERLDLAGFRSLTGWADTDALLECV 817
Query: 195 ----PNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP---NALPNV 247
++ FR+ LR ++ WAK RG+YS+A+G+LGG +WA+L A C P +
Sbjct: 818 GREEADLERFRTLLRAVKTWAKARGVYSHALGYLGGFSWAVLTAWACMRAPRDSSRTEEQ 877
Query: 248 LVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSY 307
L+ FF++FA W WP PV L P + +P +RD+ MP++ P+ P N++
Sbjct: 878 LLDYFFEMFAAWPWPLPVTLTPGTARYVP-------EGKRDQ---MPVVAPALPPRNTAR 927
Query: 308 NVSSTTLRIMQEEFQRAKELCEEI--EAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAG 365
NVS +TLR+++EE RA E E W LF P G + + + AK
Sbjct: 928 NVSRSTLRVLREELARASEALRRARQEGTAEAWDALFAPVEIPGPTAAQVVVSVEAKAHE 987
Query: 366 DFRQWKGWVESRLRQLIHMIERD 388
D + GW+ L L++ +E D
Sbjct: 988 DRQVAAGWILGHLTALVYRLEGD 1010
>gi|402697303|gb|AFQ90839.1| polyA polymerase alpha, partial [Malaclemys terrapin]
Length = 170
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/169 (55%), Positives = 117/169 (69%), Gaps = 1/169 (0%)
Query: 91 TDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLY 150
DIDALCV P R DFF + + V+DL V +A VPVIK F+G+ +D+L+
Sbjct: 3 ADIDALCVAPRXVDR-SDFFTSFYEKXKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILF 61
Query: 151 AQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFW 210
A+L IPEDLD DSLL NLD + + SLNGCRVTD IL LVPNI NFR TLR ++ W
Sbjct: 62 ARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLW 121
Query: 211 AKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHW 259
AKR IYSN +GF GG++WA+LVAR CQLYPNA+ + LV +FF +F+ W
Sbjct: 122 AKRHNIYSNILGFXGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|146163985|ref|XP_001012769.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|146145863|gb|EAR92524.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 641
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 142/234 (60%), Gaps = 3/234 (1%)
Query: 30 FASEEESLGRVEVLGRLDGIVKDWIKRVTMD-KGISDEEQIQEANAKLFTFGSYRLGVAG 88
F +EE L + + L IV W + G+S EE ++ AKL TFGS LGV+
Sbjct: 59 FGTEETELSKQRYVNELQEIVTKWSTELAQQILGVSSEES-KKYTAKLLTFGSSILGVSS 117
Query: 89 PSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDL 148
DID +C P + R+ F +L ++L V+ L+ + A+VP+I F++ +D+
Sbjct: 118 KKGDIDMVCTCPNFIKRNPHFEEELCQILLNNENVKQLSNIRTAKVPIITFQYKEQDIDI 177
Query: 149 LYAQLQFSVIPEDLDS-LQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCL 207
+AQLQ +P ++ + D LL N++E+ +LSL+G R I+ VPN++NF+ T R +
Sbjct: 178 SFAQLQLPQLPPTIEEYVSDDLLQNMEERDILSLSGRRCNQAIVRSVPNLQNFQITCRFI 237
Query: 208 RFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKW 261
+ WA+ +GIY N++GFLGGI+WA+LVA++CQ++PN N L+ FF +++W +
Sbjct: 238 KLWAQSKGIYENSIGFLGGISWAILVAKICQMFPNYEANQLLDEFFYYYSNWDF 291
>gi|383455075|ref|YP_005369064.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
gi|380728996|gb|AFE04998.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
Length = 1021
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 168/336 (50%), Gaps = 34/336 (10%)
Query: 67 EQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDL 126
+ + A L +GSY LG G +D+DA+ +GP +R D F + L++ L
Sbjct: 625 QHCERIGATLHPYGSYLLGTDGAGSDVDAVAIGPAELSR--DAFAQ--------SLLQAL 674
Query: 127 TP-----VPDARVPVIKFKFNGVSVDLLYAQLQFSVIPED---LDSLQDSLLHNLDEQTV 178
P V DA +P++K GVS DL YA V PED L L L + V
Sbjct: 675 APGSARYVADAAIPLVKLTLGGVSFDLAYAGRPEGVPPEDPLTLLGLHGEQLDPAGLRAV 734
Query: 179 LSL-NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVC 237
L L + + D + FR+ LR ++ WA+ RGIYS+A+G+LGG++W LL A C
Sbjct: 735 LGLADTLGLMDAVARDAARTERFRTLLRAVKAWARARGIYSHALGYLGGLSWTLLAAWAC 794
Query: 238 -QLYPNALPN--VLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMP 294
+ P+A+ + L+S FF FA W WP PV L P + P +RD L+P
Sbjct: 795 TRATPDAMRSDAALLSHFFGTFAAWPWPQPVTLTPETARYRPE-------GKRD---LLP 844
Query: 295 IITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGK--RTWITLFEPYHFFGSFK 352
+I P+ P N++ NVS +T R+++EE RA+EL + + +W LF+P +
Sbjct: 845 VIAPALPARNTARNVSRSTYRVIREELLRARELVARARSSRAPSSWAALFQPLSAHETSP 904
Query: 353 NYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERD 388
L++ + A A D GW+ + L++ +E D
Sbjct: 905 AALRLSVDAPTAEDREVVAGWILGHVTALVYRLEGD 940
>gi|300120198|emb|CBK19752.2| unnamed protein product [Blastocystis hominis]
Length = 359
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 140/244 (57%), Gaps = 10/244 (4%)
Query: 211 AKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPI 270
A +RGIY N G+LGG+N ALL LYPNA +V++ F+IFA W W PV++ +
Sbjct: 109 AYKRGIYKNVTGYLGGVNCALLCCYASLLYPNATASVVLYNCFRIFAEWDWQKPVLVRDV 168
Query: 271 QYQAMPHH---VWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKEL 327
Q H VW+P+ N+R + L PI+TP YP NS+YNV ++T +M EF+RA+++
Sbjct: 169 QLNPELGHDKDVWNPKENERCQNDLFPILTPCYPSQNSTYNVMASTRDVMVAEFKRARDV 228
Query: 328 CEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIER 387
I G+ TW TLF+ + FF S+K Y+QI ++AK + F W G+VES++R+ MIE
Sbjct: 229 TLSILKGETTWATLFKEFPFFTSYKYYIQIEVSAKTSEVFNNWYGFVESQIRRYTRMIEG 288
Query: 388 DMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVS-----PQDGEKFDMRLTVEEF 442
+ V+ +YP F + SS L ++ ++ G+ D+ L +F
Sbjct: 289 NKSIVIH--VYPTSFDVVRERGSSYVQPDSPLCKQFYIAFTPLEAAKGKPLDLSLATRQF 346
Query: 443 KSHV 446
K+H+
Sbjct: 347 KNHL 350
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 28 KLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVA 87
+L+ S+ E R E+L L I+++ +K++ K + ++ +E A L+TFGS+R+ V
Sbjct: 6 RLYESKNEIDHREELLKSLQSILRECVKKILTAKNLYSNQEPEEL-ASLYTFGSFRMMVH 64
Query: 88 GPSTDIDALCVGPCYATRHDDFFGKLFRMLQ 118
P DID +CVGP TR ++FF + LQ
Sbjct: 65 EPWADIDTMCVGPGSVTR-EEFFSVVSSALQ 94
>gi|340503458|gb|EGR30046.1| poly polymerase, putative [Ichthyophthirius multifiliis]
Length = 269
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 143/238 (60%), Gaps = 3/238 (1%)
Query: 74 AKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDAR 133
AKL FGS+ LGV+ DID +C P + R F L+++ + +++L + +A
Sbjct: 4 AKLLPFGSFLLGVSFKEGDIDMVCASPQFIKRETHFHEDLYKIFKANKNIKELKNIIEAN 63
Query: 134 VPVIKFKFNGVSVDLLYAQLQFSVIPEDLD-SLQDSLLHNLDEQTVLSLNGCRVTDRILS 192
+P+I F +N +D+ +AQ + +++PE+++ + + LL ++ E+ V SLNG R I++
Sbjct: 64 IPIISFIYNDQDIDISFAQFKLNILPENIEGEIPEELLEDMTEKDVDSLNGRRCNQSIIN 123
Query: 193 LVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRF 252
V + F++TL+ ++ WAK +G+Y+N +GFLGGI+WA+LVA++CQ++PN N L++ F
Sbjct: 124 SVKDQEKFKNTLKFIKLWAKSKGVYNNMLGFLGGISWAILVAKICQMFPNYEVNQLINEF 183
Query: 253 FKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVS 310
F + HW + + Y+ H ++ + +R M ++T +P NS+ ++S
Sbjct: 184 FYYYTHWDFSQIPIKIKEYYENTKHKHYNIK--KRKESIFMNVMTSCFPEYNSTAHLS 239
>gi|224088990|ref|XP_002308592.1| predicted protein [Populus trichocarpa]
gi|222854568|gb|EEE92115.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 117/178 (65%), Gaps = 5/178 (2%)
Query: 330 EIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDM 389
+IE K W LFEPY FF ++KNYLQ+ I A +A D WKGWVESRLRQL IERD
Sbjct: 210 KIELNKEQWSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLTLKIERDT 269
Query: 390 GGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWM 449
G+LQC YP ++ + S K + C +FMGL RK+GV+ Q+G++FD+R TV+EF+ + M
Sbjct: 270 DGMLQCHPYPNEYIDPS-KQCAHCAFFMGLQRKEGVTGQEGQQFDIRGTVDEFRQDIN-M 327
Query: 450 YSSWKQGMQIHVSHLRCQDIPDFVFPGGV---RPPKSLNEKKRKRIEVIESTKLKKSE 504
Y WK GM I+VSH+R + +P FVFP G RP + +N++ + E + ++ +E
Sbjct: 328 YLPWKPGMDIYVSHVRRRQLPGFVFPDGYKRSRPSRHVNQQTNRTSEDVARSQSGSAE 385
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 101/198 (51%), Gaps = 51/198 (25%)
Query: 1 MEIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVK-DWIKRVTM 59
M+ IS + PT D+ ELEK + EE R G + DW+KR+T
Sbjct: 18 MKPISVAGPTEPDLHRNAELEK-----QRRGYEER---------RCSGPYRSDWVKRLTR 63
Query: 60 DKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE 119
+G +D+ ++EANA +FTFGSYRLGV GP DID LCVGP Y R L E
Sbjct: 64 QRGYTDQ-MVEEANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNRE----------LAE 112
Query: 120 TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVL 179
V +L PVPDA VP DLD S+L+ +DEQTV
Sbjct: 113 MEEVTELQPVPDAHVP-------------------------DLDISNGSVLYEVDEQTVR 147
Query: 180 SLNGCRVTDRILSLVPNI 197
SLNGCRV D+IL LVPN+
Sbjct: 148 SLNGCRVADQILKLVPNV 165
>gi|324504415|gb|ADY41908.1| Poly(A) polymerase gamma [Ascaris suum]
Length = 560
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 149/264 (56%), Gaps = 22/264 (8%)
Query: 223 FLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVML--C-----PIQYQAM 275
FLGG++WA+LVAR CQLYPNA P L+ +FF +F W+WP+PV+L C P Q+
Sbjct: 50 FLGGVSWAILVARTCQLYPNAAPAKLIQKFFLVFTRWEWPHPVLLKDCDQTPRPPDMQSF 109
Query: 276 PHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGK 335
VWDPR+ DR HLMPIITP++P NS++NV+ +T +++ E + + EI +GK
Sbjct: 110 QELVWDPRTRSCDRYHLMPIITPAFPEQNSTFNVTKSTRQVIMNELEEGLAITIEILSGK 169
Query: 336 RTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQC 395
W LF+ +FF +K+++ + A N D W G VES++R LI +ER+ V C
Sbjct: 170 AEWSKLFDEVNFFSRYKHFIVLLCVAANENDQLVWSGLVESKIRHLIGNLERN-PCVSLC 228
Query: 396 RLYPGDFS-------ENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVW 448
+ P F+ E S+++ +F+G+ ++ Q + D+ +++F V+
Sbjct: 229 HINPQHFTPISPLPIEISIENPCCQMWFIGM----ELNKQLKKNIDLTDEIQQFNDAVMR 284
Query: 449 ---MYSSWKQGMQIHVSHLRCQDI 469
+ + GM + S++R D+
Sbjct: 285 AADFQNVYCPGMAVLPSYVRRADL 308
>gi|242035935|ref|XP_002465362.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
gi|241919216|gb|EER92360.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
Length = 589
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 153/301 (50%), Gaps = 35/301 (11%)
Query: 88 GPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVD 147
GP +DID LC+GP AT FF L +ML+ P V +L + A+VP+++FKFNG+ VD
Sbjct: 215 GPESDIDVLCIGPYIATLQHHFFVVLRQMLEGRPEVSELQSIEGAKVPLMRFKFNGILVD 274
Query: 148 LLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCL 207
Y QL F E + + +L N+D + L+G R +I+ LVPN++
Sbjct: 275 FPYVQLPFINAAEAMHAFDPHVLENVDGPSWRCLSGVRANRQIIQLVPNMK--------- 325
Query: 208 RFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVML 267
+GF GI+ A+L A VC+ +PNA N L+S FF IFAHW WP PV L
Sbjct: 326 ------------LLGFFAGIHLAILAAYVCRRHPNASINTLLSLFFDIFAHWPWPLPVSL 373
Query: 268 CPIQYQAMPHHVWDPRSNQR--DRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAK 325
DP R D LMPI+ P P S + + +T ++EE +R
Sbjct: 374 L------------DPPVLCRGPDGCSLMPIMLPCNPPEFCSSSTTESTFSKIKEELRRGY 421
Query: 326 ELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMI 385
L ++ + W LF + + +K +L+I ++A + R W GWV+SR R L+ +
Sbjct: 422 ALTKDTRSTDFDWSWLFASFPYGARYKCFLRIVLSAPLDEELRDWVGWVKSRFRNLLLKL 481
Query: 386 E 386
E
Sbjct: 482 E 482
>gi|317026523|ref|XP_001389757.2| poly(A) polymerase Pap [Aspergillus niger CBS 513.88]
Length = 428
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 117/191 (61%), Gaps = 2/191 (1%)
Query: 199 NFRSTLRCLR-FWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFA 257
NF S R WA+RR IYSN +GF GG+ WA+LVARVCQLYP A +V+V +FF+I
Sbjct: 40 NFESPAETERSLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMN 99
Query: 258 HWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIM 317
W WP PV+L PI+ + VW+P+ DR HLMPIITP+YP +++NVS +T ++
Sbjct: 100 KWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAVI 159
Query: 318 QEEFQRAKELCEEIEAGKRTWITLFEPYHFF-GSFKNYLQIHIAAKNAGDFRQWKGWVES 376
E QR ++ ++I + W LF + FF +K YL I +++ W G VES
Sbjct: 160 LRELQRGGDIVDKIFLKQLRWEDLFARHTFFTKDYKYYLSITASSRTKEAESVWSGLVES 219
Query: 377 RLRQLIHMIER 387
++R L+ ++R
Sbjct: 220 KIRHLVGALDR 230
>gi|413936469|gb|AFW71020.1| hypothetical protein ZEAMMB73_643504 [Zea mays]
Length = 388
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/159 (55%), Positives = 109/159 (68%), Gaps = 1/159 (0%)
Query: 2 EIISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDK 61
E IS S PT ++ T E+EK L D +L+ ++E++ R EVLG+LD VK WIK+ T
Sbjct: 152 EPISLSGPTEKYLMQTDEVEKYLSDARLYERQDEAILREEVLGKLDQTVKAWIKKATRIN 211
Query: 62 GISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP 121
G E+ + EANAK FTFGSY LGV GP DID LCVGP +ATR++ FF L +L E P
Sbjct: 212 GYG-EQFVHEANAKTFTFGSYCLGVHGPDADIDTLCVGPRHATRNEYFFRWLHDILAEMP 270
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPE 160
V +L PVPDA VPV+ FK NGVS+DLLYA L +VIPE
Sbjct: 271 EVSELHPVPDAHVPVLGFKINGVSIDLLYANLAHAVIPE 309
>gi|134055882|emb|CAK44143.1| unnamed protein product [Aspergillus niger]
Length = 393
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 113/180 (62%), Gaps = 1/180 (0%)
Query: 209 FWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLC 268
WA+RR IYSN +GF GG+ WA+LVARVCQLYP A +V+V +FF+I W WP PV+L
Sbjct: 12 LWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLK 71
Query: 269 PIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELC 328
PI+ + VW+P+ DR HLMPIITP+YP +++NVS +T ++ E QR ++
Sbjct: 72 PIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILRELQRGGDIV 131
Query: 329 EEIEAGKRTWITLFEPYHFF-GSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIER 387
++I + W LF + FF +K YL I +++ W G VES++R L+ ++R
Sbjct: 132 DKIFLKQLRWEDLFARHTFFTKDYKYYLSITASSRTKEAESVWSGLVESKIRHLVGALDR 191
>gi|403331436|gb|EJY64664.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 1239
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 209/462 (45%), Gaps = 117/462 (25%)
Query: 22 KILVDEK--LFASEEESLGRVEVLGRLDGIVKDW-IKRVTMDKGISDEEQIQEANAKLFT 78
K L+ EK ++ +E+ R E+L +L I+ W I+ D+ I E+ ++ +A +
Sbjct: 109 KFLMREKYTIYEDQEQKRKRQEILAKLKDILDKWQIECAVKDRKILRED-AEKRHASIHP 167
Query: 79 FGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIK 138
FGSY L P TD+D +CV P Y HDDFF K ++ V ++ V DARVPV+K
Sbjct: 168 FGSYELQAHFPETDMDVICVLPSYIL-HDDFFNKFKNLITSYEEVTNVIDVVDARVPVLK 226
Query: 139 FKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIR 198
FKF G +D+LYA + + +I N ++ I
Sbjct: 227 FKFQGFQIDMLYACIDYKLIE----------------------NNPKIPKMI-------- 256
Query: 199 NFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAH 258
K I+ N + G +++A+LVA++CQ + ++ +FF+++A
Sbjct: 257 -------------KDETIF-NKLSQGG-VSYAILVAKICQDNTDLYLCDIIYKFFEVYAD 301
Query: 259 WKWPNPVML------CPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSST 312
WKW +PV + + V D S + +MPI+TP+ NS+Y V S
Sbjct: 302 WKWFDPVFIRVGKKKDKTKLDLNKLQVLDAYS-----QDIMPILTPNTNPKNSAYRVCSH 356
Query: 313 TLRIMQEEFQRAKELCEEI----------------------------------------- 331
T + +EF R K L +E+
Sbjct: 357 TFDTICKEFTRGKNLMKELIPQSQKTIKPHPAALAKLALDQEETKLTVDALQIQESNQES 416
Query: 332 --------EAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIH 383
+ K++WI LF+ + FF ++++L+I I + + +W G+VES+LR+L+
Sbjct: 417 QVQSPVQKQKQKQSWIKLFQKFRFFDQYEHFLKIDILSTDESAHLKWLGYVESQLRRLMQ 476
Query: 384 MIERDMGGVLQCRLYPGDF----SENSVKSSSQC--HYFMGL 419
+++ D+ + R+YP F +++++ ++ +C YF+G+
Sbjct: 477 LLQ-DIEQISGLRIYPRSFNREETQDTINNAFKCCDSYFIGI 517
>gi|403274237|ref|XP_003928889.1| PREDICTED: poly(A) polymerase alpha [Saimiri boliviensis
boliviensis]
Length = 495
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 151/281 (53%), Gaps = 18/281 (6%)
Query: 231 LLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRK 290
+LVAR CQLYPNA+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 291 HLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS 350
HLMPIITP+YP NS+YNVS +T +M EEF++ + +EI K W LFE +FF
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQK 120
Query: 351 FKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSV 407
+K+Y+ + +A +W G VES++R L+ +E++ L + P F EN
Sbjct: 121 YKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPD 179
Query: 408 KSSSQCHYFMGLGRKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVS 462
K + + +GL K+ ++ E + LT ++ F V + K M+I
Sbjct: 180 KEEFRTMWVIGLVFKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAM 236
Query: 463 HLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKS 503
H++ + + + P V L +KK+ E ++ T L S
Sbjct: 237 HVKRKQL-HQLLPNHV-----LQKKKKHSTESVKLTALNDS 271
>gi|219124076|ref|XP_002182338.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406299|gb|EEC46239.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 777
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 215/497 (43%), Gaps = 111/497 (22%)
Query: 76 LFTFGSYRLGVAGP-STDIDALCVGPCYATRHDDFFGKLFRMLQETP------LVEDLTP 128
+ FGSYRLGV P S+D+D L + P + +R ++FF +L TP +
Sbjct: 161 IVPFGSYRLGVHRPGSSDLDVLVIAPPHCSR-NEFFTSFVELL-STPANGSQNTFTQIHA 218
Query: 129 VPDARVPVIKFKF-NGVSVDLLYAQL-----------QFSV-------IPEDLDSLQ--- 166
+P A PV+K ++ + + +D+L+ + Q S+ +P+ L Q
Sbjct: 219 IPTAYTPVLKCQYASSLPMDMLFVSVADPTKLIAWRQQSSMKADSRMTLPQHLPPWQPGV 278
Query: 167 ----------------------------DSLLHNLDEQT--------VLSLNGCRVTDRI 190
+L + +D+ V SLNG RVT +
Sbjct: 279 DAEAGAGGSIYPKFEEPHTNEQASTTTTTALYYRIDDSDLCDQDPAGVRSLNGARVTQTL 338
Query: 191 LSLV--PNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVL 248
L LV + F+ L ++ WA+ +G+YSN +GF GG+NWA+LVA VC+ YP +
Sbjct: 339 LDLVIPVGLERFQMVLLMVKAWARAQGVYSNVLGFWGGVNWAILVAYVCRAYPESSIADT 398
Query: 249 VSRFFKIFAHWKWPNPVMLC----------PIQYQAMPHHVWDPRSNQRDRKHLMPIITP 298
V FF+ FA+WKWP PV L P +P W+P + RD H+ PI+TP
Sbjct: 399 VQLFFETFANWKWPTPVSLIDLNDASITTPPPGAAVLPS--WNPAIHIRDGLHVCPILTP 456
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQ-RAKELCEEIEAGKRTW-----ITLFEPYHFFGSF- 351
+YP NSSYNV+ LR M E Q A ++ ++ T+ + P+H S
Sbjct: 457 AYPVMNSSYNVALPQLRRMTEALQYTAHKIARWVDRSHTTYNRGVPVRRKIPWHRLWSLN 516
Query: 352 -------KNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIER-DMGGVLQCRLYPGDF- 402
++Y+ I A F W VESRLR LI +E D R + +
Sbjct: 517 AGWVFRHQHYVHATIRAPQGEAFVTWFRLVESRLRVLISSLETPDSHAWPHGRFFYRNVP 576
Query: 403 --SENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSW---KQGM 457
+ + + H+F+GL V + D+R +F V + W M
Sbjct: 577 IAPYDELNGLREAHFFIGLRFASHV-----DTADVRTLTLDFLRQV----NGWIGRDSSM 627
Query: 458 QIHVSHLRCQDIPDFVF 474
+ + H+ ++P FV
Sbjct: 628 DLSLGHVTLPNLPRFVL 644
>gi|402877145|ref|XP_003902301.1| PREDICTED: poly(A) polymerase alpha [Papio anubis]
gi|119602049|gb|EAW81643.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
gi|119602053|gb|EAW81647.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
Length = 495
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 151/281 (53%), Gaps = 18/281 (6%)
Query: 231 LLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRK 290
+LVAR CQLYPNA+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 291 HLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS 350
HLMPIITP+YP NS+YNVS +T +M EEF++ + +EI K W LFE +FF
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQK 120
Query: 351 FKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSV 407
+K+Y+ + +A +W G VES++R L+ +E++ L + P F EN
Sbjct: 121 YKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPD 179
Query: 408 KSSSQCHYFMGLGRKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVS 462
K + + +GL K+ ++ E + LT ++ F V + K M+I
Sbjct: 180 KEEFRTMWVIGLVFKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAM 236
Query: 463 HLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKS 503
H++ + + + P V L +KK+ E ++ T L S
Sbjct: 237 HVKRKQL-HQLLPNHV-----LQKKKKHSTEGVKLTALNDS 271
>gi|1709573|sp|P51005.1|PAPO2_XENLA RecName: Full=Poly(A) polymerase alpha-B; Short=PAP-alpha-B;
AltName: Full=Polynucleotide adenylyltransferase alpha-B
gi|643646|gb|AAC59746.1| poly(A) polymerase type 2 [Xenopus laevis]
Length = 484
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 125/211 (59%), Gaps = 7/211 (3%)
Query: 231 LLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRK 290
+LVAR CQLYPNA+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 291 HLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGS 350
HLMPIITP+YP NS+YNVS +T +M EEF++ + +EI K W LF+ +FF
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLVKAEWSKLFDAPNFFQK 120
Query: 351 FKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSV 407
+K+Y+ + +A +W G VES++R L+ +E++ L + P F SENS
Sbjct: 121 YKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPSPSENSE 179
Query: 408 KSSSQCHYFMGLGRKQGVSPQDGEKFDMRLT 438
K + + +GL K+ ++ E + LT
Sbjct: 180 KEEFRTMWVIGLVFKKM---ENSENLSVDLT 207
>gi|384080895|dbj|BAM11110.1| poly(A) polymerase alpha, partial [Siebenrockiella crassicollis]
Length = 352
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 151/282 (53%), Gaps = 18/282 (6%)
Query: 230 ALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDR 289
A+LVAR CQLYPNA+ + LV +FF +F+ W+WPNPV+L + + VWDPR N DR
Sbjct: 1 AMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDR 60
Query: 290 KHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFG 349
HLMPIITP+YP NS+YNVS +T +M EEF++ + +EI K W LFE +FF
Sbjct: 61 YHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQ 120
Query: 350 SFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENS 406
+K+Y+ + +A +W G VES++R L+ +E++ L + P F EN
Sbjct: 121 KYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENP 179
Query: 407 VKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSS---WKQGMQIHV 461
K + + +GL K+ ++ E + LT ++ F V + ++ M+I
Sbjct: 180 DKEEFRTMWVIGLVFKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAA 236
Query: 462 SHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKS 503
H++ + + + P L +KK+ E + T L S
Sbjct: 237 MHVKRKQLHQLL------PNHVLQKKKKHSTEGVRLTVLNDS 272
>gi|427738965|ref|YP_007058509.1| poly(A) polymerase [Rivularia sp. PCC 7116]
gi|427374006|gb|AFY57962.1| poly(A) polymerase [Rivularia sp. PCC 7116]
Length = 1067
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 157/313 (50%), Gaps = 27/313 (8%)
Query: 79 FGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIK 138
GSYRLGV P +D+D +C P Y + DDF + + L+ L E + V DA+VP+++
Sbjct: 722 LGSYRLGVESPESDLDVVCQIPTYLS-GDDFLKNVQQRLKG--LCESIQLVLDAKVPLLR 778
Query: 139 FKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPN-- 196
K G+S+DLLY +D S ++ ++ +++ GC D I V
Sbjct: 779 LKLEGISLDLLYT---------GVDKNWASGINPKPTKSEMAIIGCWEADFIREFVQEYV 829
Query: 197 -IRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL--YPNALPNVLVSRFF 253
+F+ LR +R WAK R IY N GFLGG++WALL A CQ + P+ L++ FF
Sbjct: 830 PFDSFQWLLRAVRAWAKSRRIYGNNWGFLGGLSWALLSAWSCQYCDKNHTQPDKLLANFF 889
Query: 254 KIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTT 313
+ W P+ L Q + V PR L+PIIT PC N++ N++ +T
Sbjct: 890 NHLNQYNWRQPIALTDAGKQ---YSVQVPRD-------LLPIITSIEPCQNTARNITRST 939
Query: 314 LRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGW 373
I+ EF RA E+ +EI AG W +LFEP + +L + + + + G+
Sbjct: 940 AEILSGEFARATEMTQEIAAGNLDWSSLFEPINLQQESDIFLNLKLIGNDKQQLEKECGY 999
Query: 374 VESRLRQLIHMIE 386
+E + LI +E
Sbjct: 1000 LEGYIISLIIQLE 1012
>gi|146093287|ref|XP_001466755.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|134071118|emb|CAM69802.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
Length = 500
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 179/357 (50%), Gaps = 28/357 (7%)
Query: 47 DGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRH 106
D +V+ + R ++K + E A +++ FGS L A +DID + + C A+ +
Sbjct: 42 DEVVR--LVRQLLEKLLQAEPSAAAAWTQVYVFGSSGLDAAITGSDIDLIAL--CSASVN 97
Query: 107 DDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQ 166
FF + F E L +D+ V ARVP+IKF +NGV VDLL+A + P+ + L+
Sbjct: 98 TSFFFQTFPRSAEGRL-QDVVVVTSARVPLIKFSYNGVHVDLLFASVDMRTAPDTNELLR 156
Query: 167 DSLLHNLDEQTVLSLNGCRVTDRILSLVP-NIRNFRSTLRCLRFWAKRRGIYSNAMGFLG 225
D L + ++NG R I +P + + LR +++WA +R +Y N F
Sbjct: 157 DDFLSLVSLPCRATVNGIRTILEIRRRLPLPLDAYACVLRAVKYWAAQRQVYGNLYTFPN 216
Query: 226 GINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPN----PVMLCPIQYQAMPHHV-- 279
G+ A++VAR CQL P A V++ FF ++ W + PV + P A V
Sbjct: 217 GVCLAIMVARACQLCPVADSGVILRFFFSLYVWWLLRDTRIAPVSIVPTDENAAIARVPG 276
Query: 280 ----WDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGK 335
WD + D L P++ P+ P N+++ V + L++ +E RA++LC +
Sbjct: 277 MPPPWDAVWDAAD---LFPVLNPARPTVNAAHAVGRSGLQLFLKELLRAEQLCALV---P 330
Query: 336 RTWITLFEPYHFFGSFKNYLQIHIAAKNAG------DFRQWKGWVESRLRQLIHMIE 386
++ L+EPY+ + ++ +HI++++ WKG+VES+LR ++ +E
Sbjct: 331 MSYSALWEPYNILDEHRFFVGVHISSEHQSLAACEDTINAWKGYVESKLRMFVYALE 387
>gi|401415606|ref|XP_003872298.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488522|emb|CBZ23768.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 500
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 180/361 (49%), Gaps = 28/361 (7%)
Query: 43 LGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCY 102
+ + D +V+ + R ++K + E A +++ FGS LG A +DID + + C
Sbjct: 38 MEKTDEVVR--LVRQLLEKLLQAEPSAAAAWTQVYVFGSSGLGAAITGSDIDLIAL--CS 93
Query: 103 ATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDL 162
A+ + F + F E L +D+ V ARVP+IKF +NGV VDLL+A + P+
Sbjct: 94 ASVNTSLFFQKFPRSAEGRL-QDVVVVTSARVPLIKFSYNGVHVDLLFASVDMRTAPDTN 152
Query: 163 DSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVP-NIRNFRSTLRCLRFWAKRRGIYSNAM 221
+ L+D L + ++NG R I +P + + LR +++WA RR +Y N
Sbjct: 153 ELLRDDFLSLVSLPCRATVNGIRTILEIRRRLPLPLDAYACVLRAVKYWAARRQVYGNLY 212
Query: 222 GFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHW----KWPNPVMLCPIQYQAMPH 277
F G+ A++VAR CQL P A +V++ FF ++ W +PV + P
Sbjct: 213 TFPNGVCLAIMVARACQLCPVADSSVILRFFFSLYVWWLQRGTRIDPVSIVPTDENVAIA 272
Query: 278 HV------WDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEI 331
V WD + D L P++ P+ P N+++ V + L++ +E RA++LC +
Sbjct: 273 RVPGMPPPWDAVWDAAD---LFPVLNPARPTVNAAHAVGRSGLQLFLKELLRAEQLCSLV 329
Query: 332 EAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAG------DFRQWKGWVESRLRQLIHMI 385
+ L+EPY+ + ++ +HI++++ WKG+VES+LR ++ +
Sbjct: 330 ---PMPYSALWEPYNVLDEHRFFVGVHISSEHQSLAACEDTINAWKGYVESKLRMFVYAL 386
Query: 386 E 386
E
Sbjct: 387 E 387
>gi|384485719|gb|EIE77899.1| hypothetical protein RO3G_02603 [Rhizopus delemar RA 99-880]
Length = 494
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 193/389 (49%), Gaps = 31/389 (7%)
Query: 15 ISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANA 74
IS ++ L + +EEE + R V+ L I+ ++ + VT D + + +
Sbjct: 8 ISNEDWLSYLERYNIIETEEEKIKRKNVIDLLQHILVNFQRAVTKDL----DWKRGDIEC 63
Query: 75 KLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLF-RMLQETPLVEDLTPVPDAR 133
L FGSY LG DID + V P R +F K F ++L++ LV ++ + A
Sbjct: 64 FLSPFGSYALGGYIRDADIDLVLVCPIQVLRK--YFFKFFPQLLKQQTLVSNVESIQKAN 121
Query: 134 VPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSL 193
VP+IK + +S+D+ + +L+ + ++++ L DSLL ++DE + S++G RV +
Sbjct: 122 VPIIKCTIDNISIDISFVRLKVERVAQNINFLDDSLLKDIDETCLASMDGPRVNQFCKNQ 181
Query: 194 V--PNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA---LPNVL 248
+ ++R F+ L+C++ WA +RGIYS +G+L G +W LL+ + N ++
Sbjct: 182 IYRQHVRLFQVCLQCIKHWATQRGIYSKPIGYLNGSSWTLLLVKAYMSIKNKELLSVTMI 241
Query: 249 VSRFFKIFAHWKWPNPVML---------CPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
+SRFF +++ W W PVML I+Y ++ +MPI++P
Sbjct: 242 LSRFFSMWSQWPWQMPVMLTDYIPGINGTKIEYNSLAEF----------DNAVMPIVSPC 291
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
+P N + V+ +T RIMQ EF+R L + LF P ++ +K+++ I
Sbjct: 292 HPVCNVAPYVTKSTRRIMQIEFERGWTLLNKNAHPFAIIDKLFNPVNYTQRYKHFINIVT 351
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERD 388
++ W + +++ + + +IE D
Sbjct: 352 SSTTITSHDTWVRKMATQIPRYLELIESD 380
>gi|297695842|ref|XP_002825134.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Pongo abelii]
Length = 497
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 151/283 (53%), Gaps = 20/283 (7%)
Query: 231 LLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRS--NQRD 288
+LVAR CQLYPNA+ + LV +FF +F+ W+WPNPV+L + + VWDPR N D
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVSVNPSD 60
Query: 289 RKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFF 348
R HLMPIITP+YP NS+YNVS +T +M EEF++ + +EI K W LFE +FF
Sbjct: 61 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 120
Query: 349 GSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SEN 405
+K+Y+ + +A +W G VES++R L+ +E++ L + P F EN
Sbjct: 121 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKEN 179
Query: 406 SVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIH 460
K + + +GL K+ ++ E + LT ++ F V + K M+I
Sbjct: 180 PDKEEFRTMWVIGLVFKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIA 236
Query: 461 VSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKS 503
H++ + + + P V L +KK+ E ++ T L S
Sbjct: 237 AMHVKRKQL-HQLLPNHV-----LQKKKKHSTEGVKLTALNDS 273
>gi|442319649|ref|YP_007359670.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
gi|441487291|gb|AGC43986.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
Length = 1016
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 155/324 (47%), Gaps = 22/324 (6%)
Query: 76 LFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETP--LVEDLTPVPDAR 133
L +GSY LG +D+DA+ +GP +R DDF L R + + V DA
Sbjct: 633 LHPYGSYLLGTDEAGSDVDAVAIGPSSLSR-DDFAHALLREVATSAPEAASSARFVADAA 691
Query: 134 VPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSL 193
+P++K GVS D+ YA V P + +L LD + S+ G + +L
Sbjct: 692 IPLVKLSLGGVSFDVSYASRPEGVTPCEPLTLLAQHAPQLDTSGLRSVLGVADSQGVLDA 751
Query: 194 V----PNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVC-QLYPNALPN-- 246
+ FR+ LR ++ WAK RGIYS+A+G++GG++W +L A C + P+A +
Sbjct: 752 LGTDEATHERFRNLLRAVKRWAKARGIYSHALGYMGGLSWTVLAAWACTRGAPDAAKSDA 811
Query: 247 VLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSS 306
L++ FF+ FA W WP PV L P +RD LMP+I P+ P N++
Sbjct: 812 ELLAHFFQTFASWPWPQPVALTQETAGYRP-------DGKRD---LMPVIAPAEPLRNTA 861
Query: 307 YNVSSTTLRIMQEEFQRAKELCEEIEAGK--RTWITLFEPYHFFGSFKNYLQIHIAAKNA 364
NVS +T R ++EE RA+EL A W LF+P L++ + A
Sbjct: 862 RNVSRSTFRTVREELVRARELVTGARASSSPHAWEPLFQPVDAPRDLPARLRLSVEAPTP 921
Query: 365 GDFRQWKGWVESRLRQLIHMIERD 388
GWV L L++ +E D
Sbjct: 922 EAHEAAMGWVLGHLTALVYRLEGD 945
>gi|242051340|ref|XP_002463414.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
gi|241926791|gb|EER99935.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
Length = 460
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 160/376 (42%), Gaps = 107/376 (28%)
Query: 12 LDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQE 71
+D + L + L DE S E+ R +V+ L IV W V ++ +
Sbjct: 83 VDQRRSSSLVQFLKDEGAVPSPEDEKKREKVIRELKKIVMHWANAVAYEQSVPQ----GL 138
Query: 72 ANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPD 131
A A + T+GSY LG GP +DID LCVGPC AT FF L ++L+ P V +L +
Sbjct: 139 ATATVLTYGSYTLGAHGPESDIDVLCVGPCIATLQYHFFVVLRQLLEGRPEVSELQTIEK 198
Query: 132 ARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRIL 191
A+VP+++F+F G++VD YAQL
Sbjct: 199 AKVPLMRFRFTGIAVDFTYAQL-------------------------------------- 220
Query: 192 SLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSR 251
++ ++ F++ LRC++ WA++RG++ + +GF GI+ A+L A VC+ +P+A N L
Sbjct: 221 PVIDALKKFQALLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASVNGL--- 277
Query: 252 FFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSS 311
F +F +Q H W + R
Sbjct: 278 -FAVF---------------FQTFAHWPWQVPDSLR------------------------ 297
Query: 312 TTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWK 371
+FQ W LFEP+ + ++ +L+I + A + R W
Sbjct: 298 -------HDFQ---------------WTWLFEPFPYDKKYQQFLRIALCAPTFAELRDWA 335
Query: 372 GWVESRLRQLIHMIER 387
GWV+SR R LI +ER
Sbjct: 336 GWVKSRFRLLILKLER 351
>gi|434384462|ref|YP_007095073.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
gi|428015452|gb|AFY91546.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
Length = 1037
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 151/299 (50%), Gaps = 30/299 (10%)
Query: 74 AKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQ------ETPLVEDLT 127
A L GS RLGVA ++D+D +C+ P Y T + F ++ LQ E L +
Sbjct: 638 ASLHLLGSARLGVASSTSDLDVVCLIPDYLT-GESFLTRVADCLQGLCDSPEERLCQRSQ 696
Query: 128 PVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQT--VLSLNGCR 185
V DA+ PV++ + G+S+DLLY Q+ S D + + +L Q S+ GC
Sbjct: 697 VVLDAKYPVLRLEIEGISLDLLYTQVAVS------DGWETRNIRDLRSQIKDTKSIVGCW 750
Query: 186 VTDRILSLVPN---IRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY-- 240
D I+ LV + F+ L+ +R WAK RG+Y N+ GFLGG +W+LL A C Y
Sbjct: 751 EADLIVDLVKQQLRLERFQMLLKAVRSWAKVRGLYGNSWGFLGGFSWSLLCAYTCIDYRG 810
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P+ L++ FF+I + W + L + Q H V P+ L+PII+
Sbjct: 811 PDKSLAALLANFFQILSQHNWRQTIALTELGKQ---HQVKLPQD-------LLPIISSIE 860
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
PC N++ N++ +T +I+++EF RA E+ I GK W +L+EP L I I
Sbjct: 861 PCKNTARNITRSTAKILRDEFARAAEISTNILVGKDAWTSLYEPIDLTIGTNALLSIEI 919
>gi|71660695|ref|XP_822063.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70887456|gb|EAO00212.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 485
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 180/381 (47%), Gaps = 30/381 (7%)
Query: 70 QEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPV 129
+E + + FGS LG + +D+D + + + FF + +LQ P+V ++ V
Sbjct: 62 EERWVRAYPFGSCGLGASVADSDLDIVLFC-SFKVTAEVFFREFPPLLQ--PVVGNVVLV 118
Query: 130 PDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDR 189
P ARVPV+KF ++G SVD+++ + P L DS L + T S+NG R
Sbjct: 119 P-ARVPVVKFSYSGTSVDVVFVSAALAAPPTTEQLLDDSFLLQVARDTRHSVNGLRTVLE 177
Query: 190 ILSLVPNIRN-FRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVL 248
+ +P + F + L+ ++ WA RR +Y N + G+ A++VAR+CQ+ P + PNVL
Sbjct: 178 VKRRLPVAYDVFTTVLKSVKLWAMRRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVL 237
Query: 249 VSRFFKIFAHW----KWPNPVMLCPI-----QYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
+ FF + W +PV + + +P WDPR + R L+P+I P+
Sbjct: 238 LRFFFLFYTQWLSRHDRISPVYITTSLESRGRIPGLPDS-WDPRRDA-CRDDLLPVINPA 295
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
YP N + NV +L + E A L +E ++EPYH + + +H+
Sbjct: 296 YPYVNDARNVGRCSLEVFYAELTYAYRLLSNLETPLE---AIWEPYHILDDYSTFFVVHV 352
Query: 360 AA------KNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQC 413
K W +V S+LR L++ +ER ++ R YP ++ +S+ +
Sbjct: 353 TCEEENEEKLEAVLSVWSSYVLSKLRILLYALER----IVDARPYPQKLNDGPPRSAPKS 408
Query: 414 HYFM-GLGRKQGVSPQDGEKF 433
F+ G G+ + G +F
Sbjct: 409 GRFLKGSCFIVGIKEKVGRRF 429
>gi|389594193|ref|XP_003722343.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
gi|321438841|emb|CBZ12601.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
Length = 500
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 178/357 (49%), Gaps = 28/357 (7%)
Query: 47 DGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRH 106
D +V+ + R ++K + E A +++ FGS L A +DID + + C A+ +
Sbjct: 42 DEVVR--LVRQLLEKMLQAEPSAAAAWTQVYVFGSSGLDAAITGSDIDLIAL--CSASVN 97
Query: 107 DDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQ 166
F + F E L +++ V ARVP+IKF +NGV VDLL+A + P+ + L+
Sbjct: 98 TSLFFQTFPRSAEGRL-QNVVVVTSARVPLIKFSYNGVHVDLLFASVDMRTAPDTNELLR 156
Query: 167 DSLLHNLDEQTVLSLNGCRVTDRILSLVPNI-RNFRSTLRCLRFWAKRRGIYSNAMGFLG 225
D L + ++NG R I +P + + LR +++WA +R +Y N F
Sbjct: 157 DDFLSLVSLPCRATVNGIRTILEIRRRLPLLLAAYACVLRAVKYWAAQRQVYGNLYTFPN 216
Query: 226 GINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPN----PVMLCPIQYQAMPHHV-- 279
G+ A++VAR CQL P A V++ FF ++ W + PV + P+ A V
Sbjct: 217 GVCLAIMVARACQLCPVADSGVILRFFFSLYVWWLLRDTRIAPVSIVPMDENAAIARVPG 276
Query: 280 ----WDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGK 335
WD + D L P++ P+ P N+++ V + L++ +E RA++LC +
Sbjct: 277 MPPPWDAVWDAAD---LFPVLNPARPTVNAAHAVGRSGLQLFLKELLRAEQLCALV---P 330
Query: 336 RTWITLFEPYHFFGSFKNYLQIHIAAKNAG------DFRQWKGWVESRLRQLIHMIE 386
++ L+ PY+ + ++ +HI++++ WKG+VES+LR ++ +E
Sbjct: 331 MSYSALWAPYNILDEHRFFVGVHISSEHQSLAACEEAINAWKGYVESKLRMFVYALE 387
>gi|154417414|ref|XP_001581727.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121915957|gb|EAY20741.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 467
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 194/390 (49%), Gaps = 26/390 (6%)
Query: 80 GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKF 139
GSY + P +D+D + + P Y T + DFF + L P +++ V +A VP+IK
Sbjct: 82 GSYLMDTWEPDSDVDVILIAPKYFT-YKDFFEGFYEELIRHPSIKETIKVENAFVPIIKT 140
Query: 140 KFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRN 199
N +SVD+ +A L + ++L++++ + L+ + LSLNG I L+ N N
Sbjct: 141 VCNDISVDISFAPLNNQIKIKNLNNIKKEDMDKLEPKAQLSLNGYLNCLLIRDLMKNHPN 200
Query: 200 FRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHW 259
F R +R WA++R I+ N G+L GIN +++ A +C +PN ++L+ FF+ F+ W
Sbjct: 201 FPYFTRFIRNWAQKREIFGNLYGYLKGINISMMCAIICNQHPNCSLSMLIFHFFEYFSSW 260
Query: 260 KWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQE 319
W + L + DP M ++T SYP NS V++++ + + +
Sbjct: 261 DWDIQLNL---DSNTPDFQLNDP----------MILMTQSYPQINSLRAVTTSSRKRIIK 307
Query: 320 EFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLR 379
E QRA E ++ +W LF+ FF ++ +L I + N+ + G++ S+L
Sbjct: 308 ELQRALETTKKALISDLSWQELFKGGCFFADYRYFLCIDLIPTNSQIKDEIIGFLSSKLT 367
Query: 380 QLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTV 439
+L+ ++E ++ G+ + ++P S + +++GL K G S + D+
Sbjct: 368 RLVKILE-EIPGICEANIWPSKIS-----YGGKIIFYIGLNTKSGQS----KTIDINHAK 417
Query: 440 EEFKSHVVWMYSSWKQGMQIHVSHLRCQDI 469
F S++ S+ + M I+ +R +++
Sbjct: 418 NNFISYIS--SSTLGKAMSINFKIIRKKEL 445
>gi|242786597|ref|XP_002480837.1| poly(A) polymerase pla1, putative [Talaromyces stipitatus ATCC
10500]
gi|218720984|gb|EED20403.1| poly(A) polymerase pla1, putative [Talaromyces stipitatus ATCC
10500]
Length = 420
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 112/200 (56%), Gaps = 40/200 (20%)
Query: 40 VEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVG 99
+ L + +V +++K V KG+S ++ A K+FT+GSYRLGV GP
Sbjct: 15 ISTLQLIQRVVIEFVKTVGRRKGLS-PAALEAAGGKIFTYGSYRLGVYGP---------- 63
Query: 100 PCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIP 159
VPDA VP+IK +F+G+S+DL++A+L IP
Sbjct: 64 -----------------------------VPDAFVPIIKLEFSGISLDLIFARLILPSIP 94
Query: 160 EDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSN 219
+LD + L LD++ V SLNG RVTD+IL LV + FR LR ++ WA+RR IYSN
Sbjct: 95 LNLDLKNNGYLRGLDDKEVRSLNGTRVTDQILELVAQQKTFRLALRAIKLWAQRRAIYSN 154
Query: 220 AMGFLGGINWALLVARVCQL 239
+GF GG+ WA+LVARVCQL
Sbjct: 155 IVGFPGGVAWAMLVARVCQL 174
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 92/231 (39%), Gaps = 65/231 (28%)
Query: 326 ELCEEIEAGKRTWITLFEPYHFFG-SFKNYLQIHIAAKNAGDFRQWKGWVESRLRQL--- 381
++ E+I A + TW LF + FF +K YLQI ++K W G VES+LR L
Sbjct: 176 DIVEKIFAKQLTWNDLFTRHTFFSRDYKYYLQITASSKTKEADSVWSGLVESKLRHLVGV 235
Query: 382 --IHMIERDM-----------------------------------GGVLQCRLYPGDFSE 404
IH+++ D G ++ P +
Sbjct: 236 ERIHVVKDDAEAEQVKNGSTKYQAQGTKTETTDETKDPAHTAAAETGAEDAQV-PDPATN 294
Query: 405 NSVKSSS--QCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQ---- 458
+V S + Y++GL + + P D+ + F+S +SW+ G Q
Sbjct: 295 GAVDSRTIYTTTYYIGL-ELEPLEPGASRSLDIPTDADVFESTC----TSWR-GFQEGIN 348
Query: 459 -IHVSHLRCQDIPDFVF-PGGVRP---------PKSLNEKKRKRIEVIEST 498
+ ++H+R D+PD F PG RP P + +++ I+ ++ T
Sbjct: 349 DLSITHVRSFDLPDDAFEPGETRPVRPKKKVAKPATAAAPQKRSIDAVDGT 399
>gi|6473835|dbj|BAA87187.1| PolyA polymerase [Schizosaccharomyces pombe]
Length = 204
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 103/160 (64%)
Query: 227 INWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQ 286
+ WA++VAR+CQLYPNA+ +V+V++FF+I W WP P++L PI+ + +W+P+
Sbjct: 1 VAWAMMVARICQLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYP 60
Query: 287 RDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYH 346
D+ H MPIITP+YP +++N++ +T I+ E RA E+ ++I W LF+ +
Sbjct: 61 SDKAHRMPIITPAYPSMCATHNITLSTQTIILREMVRAGEIADQIMVKALPWSALFQKHD 120
Query: 347 FFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIE 386
FF +K+YL I AAK A +W G VES+LR L+ +E
Sbjct: 121 FFHRYKHYLTITAAAKTAEAQLKWAGLVESKLRHLVTRLE 160
>gi|320166045|gb|EFW42944.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1251
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 167/341 (48%), Gaps = 29/341 (8%)
Query: 63 ISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL 122
+S ++I +A + GS++LGV +D+D LC+GP ++ D F + L
Sbjct: 811 VSVLKRIVGEHASIQLTGSHQLGVDTSDSDLDVLCLGP-HSLSLDAFQAAAVNEFEAIGL 869
Query: 123 VEDLTPVPDARVPVIKFKF-NGVSVDLLYAQLQFSV-IPEDLDSLQDSLLHNLDEQTVLS 180
+ PV DA VP++K F +G DLLY +L +P ++ L +D L+
Sbjct: 870 -RSVRPVCDALVPLVKLVFRSGAEADLLYVRLPADAHLPCTPAQIKPRSLKAMDSTAQLT 928
Query: 181 LNGCRVTDRILSLVPN--IRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVAR-VC 237
L G D +++ +P + FRS LR ++ WA RGIYSNA GFLGG +W++LVA +
Sbjct: 929 LQGWLENDALVNAIPQPLLSTFRSLLRRVKQWALARGIYSNAAGFLGGFSWSVLVAHFMV 988
Query: 238 QLYPNALPN-----------VLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQ 286
+ P+ L + L+ FF A+W WP P++L +P
Sbjct: 989 KTKPSPLGDEDQDSTGRPLLALMHAFFVHVANWPWPQPILLNMPLGATLPADAIG----- 1043
Query: 287 RDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYH 346
+ +MP++TP++P NS+ VS +TL +M+ E QR +L A + + +P
Sbjct: 1044 ---ESVMPVMTPTWPTRNSARVVSVSTLSVMRAELQRGADLT---AAADCSLAAVADPLG 1097
Query: 347 FFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIER 387
K L + + N + + GW+ SRL L+H +ER
Sbjct: 1098 VSTLAKGILVVQLQCLNKSELERGAGWLLSRLGVLVHELER 1138
>gi|7108951|gb|AAF36551.1|AF201909_1 polyA polymerase [Trypanosoma brucei]
Length = 487
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 174/382 (45%), Gaps = 38/382 (9%)
Query: 67 EQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDL 126
+ QE A+ + FGS L A +D+D + P T D FF + R+L + +
Sbjct: 59 QNTQEQWARAYPFGSCGLSAAVAESDLDVALICPSVLTT-DIFFDEFPRLLYNS-----V 112
Query: 127 TPVP--DARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGC 184
PV ARVPV+KF++ G +VD+++ + P + L DS L + +T S NG
Sbjct: 113 GPVSVVAARVPVVKFEYRGTAVDVVFVSVGLPQPPTEEQMLDDSFLLKVARETRPSANGI 172
Query: 185 RVTDRILSLVPNIRN-FRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
R T I +P + F + L+ ++ WA RR +Y N + G A++VARVCQ+ P++
Sbjct: 173 RFTFEIKRRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNGAVLAIMVARVCQVLPSS 232
Query: 244 LPNVLVSRFFKIFAHW----KWPNPVMLCPI-----QYQAMPHHVWDPRSNQRDRKHLMP 294
P+ L+ FF + W +PV L + +P W P S + L P
Sbjct: 233 HPSTLLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPDS-WKP-SKDKICCDLFP 290
Query: 295 IITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNY 354
+I+P+YP N + +V L + E R + C EA ++EPY + +
Sbjct: 291 VISPAYPYVNDASSVGRCGLEALYSEITRVQ--CILTEARTLPLEEMWEPYRIEEEYSTF 348
Query: 355 LQI------HIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SEN 405
L + H A+ W +V SRLR LI+ IER Q R P +N
Sbjct: 349 LVVGVSCAGHSMAETEQALSVWSSYVASRLRILIYSIERHA----QARPCPRKIRLKKDN 404
Query: 406 SVKSSS---QCHYFMGLGRKQG 424
V SS ++ +G+ K+G
Sbjct: 405 HVGGSSCFLSVNFLIGVKAKEG 426
>gi|154341292|ref|XP_001566599.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063922|emb|CAM40113.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 417
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 152/296 (51%), Gaps = 27/296 (9%)
Query: 109 FFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDS 168
FF KL R+ + ++D+ V ARVP+IKF + GV VDLL+A + P+ + L+D
Sbjct: 18 FFQKLPRLTEGR--LQDVVVVTSARVPLIKFSYKGVHVDLLFASVDMRTAPDTSELLRDD 75
Query: 169 LLHNLDEQTVLSLNGCRVTDRILSLVP-NIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGI 227
L + ++NG R I +P + ++ LR +++WA +R +Y N F G+
Sbjct: 76 FLSLVSLPCRATVNGIRTILEIRRRLPLPLDSYACVLRAVKYWAAQRQVYGNLYTFPNGV 135
Query: 228 NWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWP----NPVMLCP-------IQYQAMP 276
A++VAR CQ P A V++ FF ++ W +PV + P ++ MP
Sbjct: 136 CLAIMVARACQFCPVADSGVILRFFFSLYVWWLLRDTRMDPVSIVPKEEDAAIVRVPGMP 195
Query: 277 HHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKR 336
WD + D L P++ P+ P N+++ V + L++ +E RA++LC +
Sbjct: 196 PP-WDAVWDAAD---LFPVLNPAQPTVNAAHAVGRSGLQLFFKELLRAEQLCASVPL--- 248
Query: 337 TWITLFEPYHFFGSFKNYLQIHIAAKNAG------DFRQWKGWVESRLRQLIHMIE 386
++ L++PY+ + ++ +HI+ ++ WKG+VES+LR L++ +E
Sbjct: 249 SYSELWKPYNILDEHRFFVGVHISCEHPSLAACEDTINAWKGYVESKLRMLVYSLE 304
>gi|72386969|ref|XP_843909.1| poly(A) polymerase [Trypanosoma brucei]
gi|62359037|gb|AAX79486.1| poly(A) polymerase [Trypanosoma brucei]
gi|70800441|gb|AAZ10350.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 487
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 174/382 (45%), Gaps = 38/382 (9%)
Query: 67 EQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDL 126
+ QE A+ + FGS L + +D+D + P T D FF + R+L + +
Sbjct: 59 QNTQEQWARAYPFGSCGLSASVAESDLDVALICPSVLTT-DIFFDEFPRLLYNS-----V 112
Query: 127 TPVP--DARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGC 184
PV ARVPV+KF++ G +VD+++ + P + L DS L + +T S NG
Sbjct: 113 GPVSVVAARVPVVKFEYRGTAVDVVFVSVGLPQPPTEEQMLDDSFLLKVARETRPSANGI 172
Query: 185 RVTDRILSLVPNIRN-FRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
R T I +P + F + L+ ++ WA RR +Y N + G A++VARVCQ+ P++
Sbjct: 173 RFTFEIKRRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNGAVLAIMVARVCQVLPSS 232
Query: 244 LPNVLVSRFFKIFAHW----KWPNPVMLCPI-----QYQAMPHHVWDPRSNQRDRKHLMP 294
P+ L+ FF + W +PV L + +P W P S + L P
Sbjct: 233 HPSTLLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPDS-WKP-SKDKICCDLFP 290
Query: 295 IITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNY 354
+I+P+YP N + +V L + E R + C EA ++EPY + +
Sbjct: 291 VISPAYPYVNDASSVGRCGLEALYSEITRVQ--CILTEARTLPLEEMWEPYRIEEEYSTF 348
Query: 355 LQI------HIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SEN 405
L + H A+ W +V SRLR LI+ IER Q R P +N
Sbjct: 349 LVVGVSCAGHSMAETEQALSVWSSYVASRLRILIYSIERHA----QARPCPRKIRPKKDN 404
Query: 406 SVKSSS---QCHYFMGLGRKQG 424
V SS ++ +G+ K+G
Sbjct: 405 HVGGSSCFLSVNFLIGVKAKEG 426
>gi|261327018|emb|CBH09993.1| poly(A) polymerase [Trypanosoma brucei gambiense DAL972]
Length = 487
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 174/382 (45%), Gaps = 38/382 (9%)
Query: 67 EQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDL 126
+ QE A+ + FGS L A +D+D + P T D FF + R+L + +
Sbjct: 59 QNTQEQWARAYPFGSCGLSAAVAESDLDVALICPSVLTT-DIFFDEFPRLLYNS-----V 112
Query: 127 TPVP--DARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGC 184
PV ARVPV+KF++ G +VD+++ + P + L DS L + +T S NG
Sbjct: 113 GPVSVVAARVPVVKFEYRGTAVDVVFVSVGLPQPPTEEQMLDDSFLLKVARETRPSANGI 172
Query: 185 RVTDRILSLVPNIRN-FRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
R T I +P + F + L+ ++ WA RR +Y N + G A++VARVCQ+ P++
Sbjct: 173 RFTFEIKRRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNGAVLAIMVARVCQVLPSS 232
Query: 244 LPNVLVSRFFKIFAHW----KWPNPVMLCPI-----QYQAMPHHVWDPRSNQRDRKHLMP 294
P+ L+ FF + W +PV L + +P W P S + L P
Sbjct: 233 HPSTLLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPDS-WKP-SKDKICCDLFP 290
Query: 295 IITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNY 354
+I+P+YP N + +V L + E R + + E+ ++EPY + +
Sbjct: 291 VISPAYPYVNDASSVGRCGLEALYSEITRVQCILTEVRTLPLE--EMWEPYRIEEEYSTF 348
Query: 355 LQI------HIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SEN 405
L + H A+ W +V SRLR LI+ IER Q R P +N
Sbjct: 349 LVVGVSCAGHSMAETEQALSVWSSYVASRLRILIYSIERHA----QARPCPRKIRLKKDN 404
Query: 406 SVKSSS---QCHYFMGLGRKQG 424
V SS ++ +G+ K+G
Sbjct: 405 HVGGSSCFLSVNFLIGVKAKEG 426
>gi|222623746|gb|EEE57878.1| hypothetical protein OsJ_08540 [Oryza sativa Japonica Group]
Length = 253
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 116/268 (43%), Gaps = 66/268 (24%)
Query: 139 FKFNGVSVDLLYAQLQFSVIPEDLDSLQ--DSLLHNLDE-QTVLSLNGCRVTDRILSLVP 195
+F GV VDL+YA + P Q S+L LD+ T SLNG RV D IL LVP
Sbjct: 1 MRFRGVQVDLVYAGVCLPWCPTTWSGPQCDRSVLRGLDDLATARSLNGIRVADEILRLVP 60
Query: 196 NIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKI 255
FR+ LRC++ WAK RG+YSN GFLGGI WA+LVAR+CQLYPN P
Sbjct: 61 ETAVFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPACCSRASSAA 120
Query: 256 FAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLR 315
P VML I++ + R+H LR
Sbjct: 121 LRGGSGPARVMLRAIEHDDGELGL---------RRH----------------------LR 149
Query: 316 IMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVE 375
+ E+ ++C+EI W+ GWVE
Sbjct: 150 VTTEQLAVGDDVCQEIVKAGAMWV--------------------------------GWVE 177
Query: 376 SRLRQLIHMIERDMGGVLQCRLYPGDFS 403
SRLRQL +E D GVL C L+P ++
Sbjct: 178 SRLRQLSARVEADTSGVLLCHLHPQAYA 205
>gi|300123436|emb|CBK24709.2| unnamed protein product [Blastocystis hominis]
Length = 363
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 147/295 (49%), Gaps = 17/295 (5%)
Query: 134 VPVIKFKFNGVSVDLLYAQLQ---FSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRI 190
VP++ + +GVSVD+ +A L F +PE LD L + +L N+ E T+ SL GCR T+ +
Sbjct: 8 VPIMTMEIDGVSVDISFASLPSYPFK-LPEFLDILSNDILRNVSEHTLHSLTGCRCTEFV 66
Query: 191 LSLVPN---IRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV 247
+ + + + FR T +RF+ K+ IY N MG+LGG+N +L+A L + L N
Sbjct: 67 IQKLRSENKLDIFRQTFFGIRFFTKQYKIYKNVMGYLGGVNITILLASTNLLENDFLTNT 126
Query: 248 LVSRFFKIFAHWKWPNPVMLCP---IQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTN 304
FF A + + P W + + + ++TP+YP N
Sbjct: 127 F--HFFHFVADHLGSEIIAMTPQLSFPELGFDEENWSDKPSNFSNHDSLVLLTPTYPRMN 184
Query: 305 SSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNA 364
++ +S ++L+ ++ + +R E + G+ T + + EPY FF F Y ++ ++A
Sbjct: 185 TARTISRSSLQFIRSQARRVYEKIKSYVDGESTLLQMVEPYQFFEGFPIYFEVLVSASAN 244
Query: 365 GDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGL 419
+F+ W G VES++R L+ + + V L P S S++ C Y +GL
Sbjct: 245 SEFKDWLGLVESKIRYLVFFLSLRIENV---ALNPNPIVSKS-NSNAACFY-IGL 294
>gi|340959918|gb|EGS21099.1| hypothetical protein CTHT_0029400 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1213
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 189/410 (46%), Gaps = 48/410 (11%)
Query: 20 LEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTF 79
+EK L+ + S+EE R + + L + D I T+ G+S +A +
Sbjct: 613 VEKALIQLGVIPSQEEEATRKQAVDLLRNTITDVIAS-TVPSGLSR----FQAPIVIVPV 667
Query: 80 GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARV---PV 136
GSY LGV S+D+D LC+GP A FF + R L++ P +D+ + R +
Sbjct: 668 GSYGLGVWTSSSDLDVLCIGPFSA---QTFFALVTRALRKVP-PQDIKIIRRVRANTGTM 723
Query: 137 IKFKFNGVSVDLLYAQLQFSVIPED----LDSLQDSLLHNLDEQTVLSLNGCRVTDRILS 192
++ + +G+ DL + I E L + + + +L Q++L L R D +
Sbjct: 724 LELEIHGIKTDLQCCPA--TTIAERWGDVLRTAPNDPVWDLSPQSLLKLKAVRDMDYLRR 781
Query: 193 LVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN--------AL 244
VPNIR FR+ R +R WAK RG+Y++ GFL GI A+LVARV +L N +
Sbjct: 782 TVPNIRVFRAANRAIRAWAKARGVYTSRFGFLSGIQIAILVARVAKLLANNPDVKTPITV 841
Query: 245 PNVLVSRFFKIFAHWKWPNPVMLCPIQYQ-AMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+ LV+ FF +A + W + P ++ +P+ N+ + + I+ P
Sbjct: 842 EDFLVT-FFTHYASFPWSTHLAFDPFFHRNRLPY-------NRVPFREPIAILGYFPPAL 893
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEP---------YHFFGSFKNY 354
N++ S ++ R + +EF+RA E + W F ++K Y
Sbjct: 894 NTAAAASPSSARTLADEFRRAGEAL--VSGNVTDWAFFLSGTGSNGTTGVQEFLSAYKTY 951
Query: 355 LQIHIAAKNAGDFR--QWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF 402
+++ + R Q+ GW+ESRL L+ I R GVL R++P F
Sbjct: 952 IRLDASYWGLSRSRGSQFLGWLESRLVSLLVDISRRTNGVLHARIWPARF 1001
>gi|303317898|ref|XP_003068951.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240108632|gb|EER26806.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1241
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 202/446 (45%), Gaps = 47/446 (10%)
Query: 3 IISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKG 62
+I +S T ++ +L+ L + + ++E+ R VL L ++ + G
Sbjct: 607 LIPSSLATPANLSDKHDLDLCLREHSMVPTKEDISKRTAVLDLLRNVIIHGSAARVEENG 666
Query: 63 ISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL 122
SD E + L GSY LGV PS+D+D L +GP + K+F + E L
Sbjct: 667 HSDNEP--DIAMVLVPVGSYGLGVWSPSSDVDCLSIGPISS--------KIFFAIAEQRL 716
Query: 123 -------VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQ--DSLLHNL 173
+ L V A +I+ + NG+ DL Y V SL D + +L
Sbjct: 717 RRAADSGIRILRKVKAATGTMIELEVNGIKCDLHYCPAARVVEGWQRISLSPPDDPIFDL 776
Query: 174 DEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLV 233
Q + L R D I +P++ FR R + WAK RG+Y + G+LGGI+ +++
Sbjct: 777 SYQALTKLQAFRDLDYIRRSIPDLAAFRKAHRFITAWAKHRGVYLSRFGYLGGIHITMML 836
Query: 234 ARVCQLYPNAL---PNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRK 290
+RV +L+ + ++ RFF+ +A + W + + P +++ P + +R
Sbjct: 837 SRVFKLFCGEVRVTSTDMIYRFFQYYADFDWEHETVFDPFFFESTPRY-------RRYAN 889
Query: 291 HLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTW-------ITLFE 343
M I+T + P N + ++ + R + EE +R +L + + TW ++ E
Sbjct: 890 EPMVILTINVPLINVA-RATAGSARTIVEELRRMAQLMSDPDM---TWSKLLNSTVSTLE 945
Query: 344 PY-HFFGSFKNYLQIHIA--AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPG 400
P F ++ +Y++IH+ + + GW+ESR +L++ I+R + + R++P
Sbjct: 946 PSEEFLTAYSSYIKIHVQYWGISLAKGKMLLGWLESRCVRLLNDIDRKLPSIY-ARIWPA 1004
Query: 401 DFSENSVKSSS---QCHYFMGLGRKQ 423
FS S Q Y +GL +++
Sbjct: 1005 RFSSKDAMSDDSEYQGCYLIGLTKRE 1030
>gi|320039014|gb|EFW20949.1| hypothetical protein CPSG_02791 [Coccidioides posadasii str.
Silveira]
Length = 1241
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 203/446 (45%), Gaps = 47/446 (10%)
Query: 3 IISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKG 62
+I +S T ++ +L+ L + + ++E+ R VL L ++ + G
Sbjct: 607 LIPSSLATPANLSDKHDLDLCLREHSMVPTKEDISKRTAVLDLLRNVIIHGSAARVEENG 666
Query: 63 ISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL 122
SD E + L GSY LGV PS+D+D L +GP + K+F + E L
Sbjct: 667 HSDNEP--DIAMVLVPVGSYGLGVWSPSSDVDCLSIGPISS--------KIFFAIAEQRL 716
Query: 123 -------VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQ--DSLLHNL 173
+ L V A +I+ + NG+ DL Y V SL D + +L
Sbjct: 717 RRAADSGIRILRKVKAATGTMIELEVNGIKCDLQYCPAARVVEGWQRISLSPPDDPIFDL 776
Query: 174 DEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLV 233
Q + L R D I +P++ FR R + WAK RG+Y + G+LGGI+ +++
Sbjct: 777 SYQALTKLQAFRDLDYIRRSIPDLAAFRKAHRFITAWAKHRGVYLSRFGYLGGIHITMML 836
Query: 234 ARVCQLYPNAL---PNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRK 290
+RV +L+ + ++ RFF+ +A + W + + P +++ P + +R
Sbjct: 837 SRVFKLFCGEVRVTSTDMIYRFFQYYADFDWEHETVFDPFFFESTPRY-------RRYAN 889
Query: 291 HLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTW-------ITLFE 343
M I+T + P N + ++ + R + EE +R +L + + TW ++ E
Sbjct: 890 EPMVILTINVPLINVA-RATAGSARTIVEELRRMAQLMSDPDM---TWSKLLNSTVSTLE 945
Query: 344 PY-HFFGSFKNYLQIHIA--AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPG 400
P F ++ +Y++IH+ + + GW+ESR +L++ I+R + + R++P
Sbjct: 946 PSEEFLTAYSSYIKIHVQYWGISLAKGKMLLGWLESRCVRLLNDIDRKLPSIY-ARIWPA 1004
Query: 401 DFSEN---SVKSSSQCHYFMGLGRKQ 423
FS S S Q Y +GL +++
Sbjct: 1005 RFSSKDAMSDDSEYQGCYLIGLTKRE 1030
>gi|340052780|emb|CCC47065.1| putative polynucleotide adenylyltransferase [Trypanosoma vivax
Y486]
Length = 486
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 165/377 (43%), Gaps = 32/377 (8%)
Query: 49 IVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDD 108
+V+D RV EQ A + FGS L + +D+D + P +
Sbjct: 45 LVEDIALRVVQRHITEPTEQWVRA----YPFGSCGLAASVADSDLDIVLFCP-FKVTAAV 99
Query: 109 FFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDS 168
FF + +LQ V V ARVPV+KF G VDL++ + + P L DS
Sbjct: 100 FFHEFPLLLQT---VVGHVIVVAARVPVVKFAHEGTLVDLVFVSVALAAPPTTEQLLDDS 156
Query: 169 LLHNLDEQTVLSLNGCRVTDRILSLVPNIRN-FRSTLRCLRFWAKRRGIYSNAMGFLGGI 227
L + +T S+NG R T I +P + F + L+ ++ WA +R +Y N + G+
Sbjct: 157 FLLQVARETRHSVNGIRFTLEIKRRLPVTYDVFSTVLKVVKLWAMKRQVYGNLYTYPSGV 216
Query: 228 NWALLVARVCQLYPNALPNVLVSRFFKIFAHW----KWPNPVMLCPI-----QYQAMPHH 278
A++VAR CQ+ P + PNV++ FF + W +PV + + MP
Sbjct: 217 VLAIMVARACQVMPASHPNVVLRFFFLFYTQWMSRHDRISPVYITTSLQGRGRVPGMPEP 276
Query: 279 VWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTW 338
WDP + ++ L+P++ P+YP N + V L + E RA L E+
Sbjct: 277 -WDP-ALEKFSHDLLPVLNPAYPFVNDANAVGRCGLEVFYSEVTRAHHLLSTTESFPLE- 333
Query: 339 ITLFEPYHFFGSFKNYLQIHIAAKN------AGDFRQWKGWVESRLRQLIHMIERDMGGV 392
+++PY F ++L + ++ D W +V S+LR LI+ +E +
Sbjct: 334 -DVWKPYSITDDFSSFLLVQVSCDGNSEEGVENDLEVWSSYVASKLRILIYAVE----CI 388
Query: 393 LQCRLYPGDFSENSVKS 409
+ R YP + S
Sbjct: 389 VDARPYPHKLKDRVATS 405
>gi|354681993|ref|NP_001238936.1| poly(A) polymerase alpha isoform 3 [Homo sapiens]
gi|28071108|emb|CAD61935.1| unnamed protein product [Homo sapiens]
gi|119602054|gb|EAW81648.1| poly(A) polymerase alpha, isoform CRA_e [Homo sapiens]
Length = 238
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 112/182 (61%), Gaps = 2/182 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 26 ISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 85
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ I+ K+FTFGSYRLGV DIDALCV P + R DFF + L+ V
Sbjct: 86 P-QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSFYDKLKLQEEV 143
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD DSLL NLD + + SLNG
Sbjct: 144 KDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNG 203
Query: 184 CR 185
R
Sbjct: 204 MR 205
>gi|392870452|gb|EAS32255.2| hypothetical protein CIMG_03182 [Coccidioides immitis RS]
Length = 1241
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 216/475 (45%), Gaps = 54/475 (11%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
I +S T ++ +L+ L + + ++E+ R VL L ++ + G
Sbjct: 608 IPSSLATPANLSDKHDLDLCLREHSMVPTKEDISKRTAVLDLLRNVIIHGSAARVDENGH 667
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL- 122
S+ E + L GSY LGV PS+D+D L +GP + K+F + E L
Sbjct: 668 SNNEP--DIAMVLVPVGSYGLGVWSPSSDVDCLSIGPISS--------KIFFAIAEQRLR 717
Query: 123 ------VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQ--DSLLHNLD 174
+ L V A +I+ + NG+ DL Y V SL D + +L
Sbjct: 718 RAADSGIRILRKVKAATGTMIELEVNGIKCDLQYCPAARVVEGWQRISLSPPDDPIFDLS 777
Query: 175 EQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVA 234
Q + L R D I +P++ FR+ R + WAK RG+Y + G+LGGI+ ++++
Sbjct: 778 YQALTKLQAFRDLDYIRRSIPDLAAFRTAHRFITAWAKHRGVYLSRFGYLGGIHITMMLS 837
Query: 235 RVCQLYPNAL---PNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKH 291
RV +L+ + ++ RFF+ +A + W + + P +++ P + +R
Sbjct: 838 RVFKLFCGEVRVTSTDMIYRFFQYYADFDWEHKTVFDPFFFESTPRY-------RRYANE 890
Query: 292 LMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTW-------ITLFEP 344
M I+T + P N + ++ + R + EE +R +L + + TW ++ EP
Sbjct: 891 PMVILTINVPLINVA-RATAGSARTIVEELRRMAQLMSDPDM---TWSKLLNSTVSTLEP 946
Query: 345 Y-HFFGSFKNYLQIHIA--AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGD 401
F ++ +Y++IH+ + + GW+ESR +L++ I+R + + R++P
Sbjct: 947 SEEFLTAYSSYIKIHVQYWGISLAKGKTLLGWLESRCVRLLNDIDRKLPSIY-ARMWPAR 1005
Query: 402 FSEN---SVKSSSQCHYFMGLGRK--QGVSPQDGEK----FDMRLTV-EEFKSHV 446
FS S S Q Y +GL ++ +G E+ D+ + V E+FK+ +
Sbjct: 1006 FSSKDAMSDDSEYQGCYLIGLTKRETEGTEAMTKEERKQSLDLMMRVLEKFKTQI 1060
>gi|358333281|dbj|GAA51822.1| poly(A) polymerase [Clonorchis sinensis]
Length = 426
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 150/331 (45%), Gaps = 45/331 (13%)
Query: 146 VDLLYAQLQFSVIPEDLDSLQD--SLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRST 203
VDL+ ++L S IP+ LD Q L N+D +V SL+G + + ++ +F
Sbjct: 51 VDLVISRLATSYIPQQLDFEQTPGDLYRNMDAISVRSLSGLHLAHELNKMMFGHAHFLPL 110
Query: 204 LRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY----------------------P 241
LR +R W + R I S GF I W ++V +C+ P
Sbjct: 111 LRVIRTWVRARAIGSYVYGFPASIAWTIMVVYICRRLGDNSQISTFCVCRRSSVCRTSEP 170
Query: 242 NALPN--------------VLVSRFFKIFAHWKWPNPVMLCPIQYQA-MPHHVWDPRSNQ 286
A N LV FF FA W WP+PV + I++ + + WDP+ N
Sbjct: 171 AAERNSGEESLASRSHALFCLVYTFFAQFASWPWPHPVQIASIKFASDLNIFSWDPQRNA 230
Query: 287 RDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYH 346
+D + LMPI+TP +P N+++ V T +I+ +E RA+++ ++ G TW LFE Y
Sbjct: 231 QDGRDLMPILTPVFPNKNAAFTVRQATRKIVTDELIRARDIVSDVLRGSGTWEKLFERYD 290
Query: 347 FFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENS 406
+++L + + + + G ++SRLR L +E D + R+ P S +
Sbjct: 291 LRDDHRHFLLLTLQTTSKEELVVVGGLIDSRLRDLAQALE-DEQYIRSARIAPIQESPEA 349
Query: 407 VKSSSQC-----HYFMGLGRKQGVSPQDGEK 432
+S++ C + +G+ + DG +
Sbjct: 350 NQSNASCKQLRRQWLIGMDIESAPRLPDGTR 380
>gi|115401228|ref|XP_001216202.1| predicted protein [Aspergillus terreus NIH2624]
gi|114190143|gb|EAU31843.1| predicted protein [Aspergillus terreus NIH2624]
Length = 1168
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 198/426 (46%), Gaps = 42/426 (9%)
Query: 17 TKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKL 76
++L + L D F S EE R EV+ + +V D + + +++ + A +
Sbjct: 557 VEQLMQSLWDHNAFPSPEEIRQRQEVVDLIRQVVNQ------RDPNLPTDTRLRFSFA-V 609
Query: 77 FTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQET--PLVEDLTPVPDARV 134
GSY LGV S+DID L +G A FF + L++ ++ L V A
Sbjct: 610 VPVGSYGLGVWNSSSDIDLLVIGQLSAR---TFFALMVAKLRKAIHGEIKILRKVKAASG 666
Query: 135 PVIKFKFNGVSVDLLYAQLQFSV--IPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILS 192
+++ + GV VDL Y V P+ LD D L +++L LN R +
Sbjct: 667 VMLELEARGVRVDLQYCAASRVVESWPQALDLPDDDSAFYLPMRSLLKLNPLRDMHYLQR 726
Query: 193 LVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL-YPNALP---NVL 248
+P++ FRS R ++ WA+RRG+YS +G+LGGI+ LL++ VC+L + A P +
Sbjct: 727 TIPDLATFRSAYRFIKTWAQRRGVYSAKLGYLGGIHITLLLSSVCKLSFQKAGPLSAADM 786
Query: 249 VSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYN 308
+ FF+ +A ++W ++ P Y+ P + R + + I+T + P N +
Sbjct: 787 ICTFFRHYAQFQWDRTIVYDPGFYKTAPRYF-------RTSREPIVILTQNTPKVNVARA 839
Query: 309 VSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPY-------HFFGSFKNYLQIHIAA 361
S + R +++EF+R + ++ + + TW L F S+ +Y ++++
Sbjct: 840 ASLPSARTLEQEFKR---MDRQLASPEITWAGLLGAAGSSSGVEDFLTSYPSYAKVNVQY 896
Query: 362 KNAG--DFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHY---- 415
AG R GW+E R L+ I+R L R++P F++ S S+ Y
Sbjct: 897 WGAGAAKGRLLVGWLEWRCVSLLVDIQRRFPD-LHARIWPARFTDMEEASESEGEYQGCF 955
Query: 416 FMGLGR 421
+GL R
Sbjct: 956 LIGLTR 961
>gi|308507393|ref|XP_003115880.1| hypothetical protein CRE_18491 [Caenorhabditis remanei]
gi|308256415|gb|EFP00368.1| hypothetical protein CRE_18491 [Caenorhabditis remanei]
Length = 311
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 91/167 (54%), Gaps = 37/167 (22%)
Query: 181 LNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
LNG RV +++L VPN F +LR ++ WAK G+YSNAMGF GGI WA+LVAR CQLY
Sbjct: 72 LNGIRVAEQLL--VPNRDTFCQSLRAIKLWAKNHGVYSNAMGFFGGITWAILVARTCQLY 129
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
PNA P+ ++ + F +F+ W WP+PV+L KH +
Sbjct: 130 PNAAPSKIIQKVFLVFSTWNWPSPVIL----------------------KH--------F 159
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHF 347
C + S TTL I+Q+E + A ++C I+ G TW L + F
Sbjct: 160 DCVD-----SKTTLHIIQKEMKAALKICNRIQKGNATWNDLANWFRF 201
>gi|224143336|ref|XP_002336029.1| predicted protein [Populus trichocarpa]
gi|222838985|gb|EEE77336.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 96/179 (53%), Gaps = 40/179 (22%)
Query: 329 EEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERD 388
+EIE K W LFEPY FF ++KNYLQ+ I A +A D WKGWVESRLRQL
Sbjct: 30 KEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLT------ 83
Query: 389 MGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVW 448
L RK+GV+ Q+G++FD+R TV+EF+ +
Sbjct: 84 ------------------------------LKRKEGVTGQEGQQFDIRETVDEFRQDIN- 112
Query: 449 MYSSWKQGMQIHVSHLRCQDIPDFVFPGGV---RPPKSLNEKKRKRIEVIESTKLKKSE 504
MY WK GM I+VSH+R + +P FVFP G RP + +N++ + E + ++ +E
Sbjct: 113 MYLPWKAGMDIYVSHVRRRQLPGFVFPDGYKRSRPSRHMNQQTNRTSEDVARSQSGSAE 171
>gi|238492513|ref|XP_002377493.1| poly(A) polymerase pla1, putative [Aspergillus flavus NRRL3357]
gi|220695987|gb|EED52329.1| poly(A) polymerase pla1, putative [Aspergillus flavus NRRL3357]
Length = 1297
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 173/377 (45%), Gaps = 39/377 (10%)
Query: 75 KLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQET--PLVEDLTPVPDA 132
++ GSY GV S+D+D L +G FF + L+ V L V A
Sbjct: 637 EVVAVGSYGFGVWNSSSDMDILVIGQVSPR---TFFALMIAKLRRATDSDVVLLRKVKAA 693
Query: 133 RVPVIKFKFNGVSVDLLYAQLQFSV--IPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRI 190
+++ + GV VDL Y V P+ L+ D +L Q++L LN R +
Sbjct: 694 SGIMLELEVRGVRVDLQYCAATRVVESWPQALELPADHSTFDLPMQSLLKLNSLRDMHYL 753
Query: 191 LSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV--- 247
+P++ +FR R ++ WA+RRGIYS+ +G+LGGI+ LL+AR+C L +
Sbjct: 754 QRTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAA 813
Query: 248 -LVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSS 306
+++ FFK +A + W V+ P Y++ P + R ++ + I++ P N +
Sbjct: 814 DIITTFFKHYAQFNWEKQVVYDPSFYKSPPRYF-------RPQREPLVILSQHQPKVNVA 866
Query: 307 YNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPY-------HFFGSFKNYLQIHI 359
S + R + +EFQRA +L + + TW L F S+++Y ++++
Sbjct: 867 RAASIPSTRTLVQEFQRADKLLSQQDV---TWEQLAGSIENSTGADEFLKSYRSYAKVNV 923
Query: 360 A--AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSE-----NSVKSSSQ 412
A R GW+E R L+ I R + R++P F++ + K
Sbjct: 924 QYWGGAATKGRMLVGWLEWRCVSLLVDIHRKFPDI-HARIWPARFTDMEEVGETTKEYQG 982
Query: 413 CHYFMGLGRKQ--GVSP 427
C Y +GL R+ G +P
Sbjct: 983 C-YLIGLTRESTPGATP 998
>gi|317156627|ref|XP_001825892.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
Length = 1195
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 171/372 (45%), Gaps = 39/372 (10%)
Query: 80 GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQET--PLVEDLTPVPDARVPVI 137
GSY GV S+D+D L +G FF + L+ V L V A ++
Sbjct: 642 GSYGFGVWNSSSDMDILVIGQVSPR---TFFALMIAKLRRATDSDVVLLRKVKAASGIML 698
Query: 138 KFKFNGVSVDLLYAQLQFSV--IPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVP 195
+ + GV VDL Y V P+ L+ D +L Q++L LN R + +P
Sbjct: 699 ELEVRGVRVDLQYCAATRVVESWPQALELPADHSTFDLPMQSLLKLNSLRDMHYLQRTIP 758
Query: 196 NIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV----LVSR 251
++ +FR R ++ WA+RRGIYS+ +G+LGGI+ LL+AR+C L + +++
Sbjct: 759 DLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAADIITT 818
Query: 252 FFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSS 311
FFK +A + W V+ P Y++ P + R ++ + I++ P N + S
Sbjct: 819 FFKHYAQFNWEKQVVYDPSFYKSPPRYF-------RPQREPLVILSQHQPKVNVARAASI 871
Query: 312 TTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPY-------HFFGSFKNYLQIHIA--AK 362
+ R + +EFQRA +L + + TW L F S+++Y ++++
Sbjct: 872 PSTRTLVQEFQRADKLLSQQDV---TWEQLAGSIENSTGADEFLKSYRSYAKVNVQYWGG 928
Query: 363 NAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSE-----NSVKSSSQCHYFM 417
A R GW+E R L+ I R + R++P F++ + K C Y +
Sbjct: 929 AATKGRMLVGWLEWRCVSLLVDIHRKFPDI-HARIWPARFTDMEEVGETTKEYQGC-YLI 986
Query: 418 GLGRKQ--GVSP 427
GL R+ G +P
Sbjct: 987 GLTRESTPGATP 998
>gi|253747873|gb|EET02347.1| Hypothetical protein GL50581_387 [Giardia intestinalis ATCC 50581]
Length = 609
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 118/229 (51%), Gaps = 13/229 (5%)
Query: 20 LEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQ--------E 71
L L D KL+ S EE+ + +L L+ I+ DW+ D +++ + + E
Sbjct: 39 LLSYLKDCKLYVSPEEARKKEAILRTLELIISDWVYETYKDAFMANMQFYRKQPNMPRSE 98
Query: 72 ANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPD 131
+L+ FGSY LG+ PS+D+D + V P Y R DFF K ++ + P V + D
Sbjct: 99 RLVRLYPFGSYYLGINEPSSDVDTVVVFPQY-VRIADFFDKFPTIIGQMPQVSYFDCIRD 157
Query: 132 ARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRIL 191
A+VP+I ++ + DL A + + I + + L N+ E+++LSLNG R +
Sbjct: 158 AKVPLITLTYDSIDFDLSAAVMAVNRITDAIPFLDPECTANMHEKSILSLNGYRTNIHVK 217
Query: 192 SLVPN----IRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARV 236
S F++ +R LR W+KR+ IYSN GF GGIN +LVA V
Sbjct: 218 SQFAGNNAFYNTFQNAVRALRLWSKRKNIYSNRCGFFGGINCIILVANV 266
>gi|301087134|gb|ADK60784.1| nucleic acid binding protein [Arachis diogoi]
gi|301087263|gb|ADK60848.1| putative nucleic acid binding protein, partial [Arachis diogoi]
Length = 74
Score = 125 bits (314), Expect = 7e-26, Method: Composition-based stats.
Identities = 51/74 (68%), Positives = 61/74 (82%)
Query: 228 NWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQR 287
N ALLVARVCQLYPNA+P++LVSRFF+++ W+WPNPVMLCPI+ + VWDPR N R
Sbjct: 1 NLALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEENELGFSVWDPRKNPR 60
Query: 288 DRKHLMPIITPSYP 301
DR H MPIITP+YP
Sbjct: 61 DRTHHMPIITPAYP 74
>gi|308160310|gb|EFO62803.1| Poly(A) polymerase, putative [Giardia lamblia P15]
Length = 617
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 116/225 (51%), Gaps = 13/225 (5%)
Query: 24 LVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQ--------EANAK 75
L D KL+ S EE+ + +L L+ I+ DW+ D +++ + + E +
Sbjct: 43 LKDCKLYVSPEETRKKEAILRNLELIISDWVYETYKDAFLANMQFYRKQPNMPRSERLVR 102
Query: 76 LFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVP 135
L+ FGSY LG+ PS+D+D + + P Y R DFF K ++ + P V + DA+VP
Sbjct: 103 LYPFGSYYLGINEPSSDVDTVVIFPQYV-RIVDFFDKFPTIIGQMPQVSYFDCIRDAKVP 161
Query: 136 VIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVP 195
+I ++ V DL A + + + + + L N+ E+++LSLNG R + S
Sbjct: 162 LITLTYDSVDFDLSAAVMAVNRVTDAIPFLDPECTANMHEKSILSLNGYRTNIHVKSQFA 221
Query: 196 NIRNFRST----LRCLRFWAKRRGIYSNAMGFLGGINWALLVARV 236
F ST +R LR W KR+ IYSN GF GGIN +LVA V
Sbjct: 222 GNNIFYSTFQNAVRALRLWCKRKNIYSNRCGFFGGINCIILVANV 266
>gi|159109295|ref|XP_001704913.1| Hypothetical protein GL50803_13749 [Giardia lamblia ATCC 50803]
gi|157432988|gb|EDO77239.1| hypothetical protein GL50803_13749 [Giardia lamblia ATCC 50803]
Length = 674
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 116/221 (52%), Gaps = 13/221 (5%)
Query: 28 KLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQ--------EANAKLFTF 79
KL+ S EE+ + +L L+ I+ DW+ D +++ + + E +L+ F
Sbjct: 104 KLYVSSEETRKKEAILRNLELIISDWVYETYKDAFLANMQFYRKQPNMPRSERLVRLYPF 163
Query: 80 GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKF 139
GSY LG+ PS+D+D + + P Y R DFF K ++ + P V + DA+VP+I
Sbjct: 164 GSYYLGINEPSSDVDTVVIFPQYV-RIADFFDKFPTIIGQMPQVSYFDCIRDAKVPLITL 222
Query: 140 KFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVP--NI 197
++ V DL A + + + + + L N+ E+++LSLNG R + S NI
Sbjct: 223 TYDSVDFDLSAAVMAVNRVTDAIPFLDPECTANMHEKSILSLNGYRTNIHVKSQFAGNNI 282
Query: 198 --RNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARV 236
F++ +R LR W KR+ IYSN GF GGIN +LVA V
Sbjct: 283 FYSTFQNAVRALRLWCKRKNIYSNRCGFFGGINCIILVANV 323
>gi|294888316|ref|XP_002772423.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239876612|gb|EER04239.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 113
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 223 FLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQA----MPHH 278
F GGI WA+LVARVCQ++PN LV RFF I + W W NPV LCPI+ + M
Sbjct: 1 FFGGITWAILVARVCQMFPNMQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFK 60
Query: 279 VWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKEL 327
VW+P+ DR HLMP+ITP++P NS+YNV+ TT RI+ E +RA +L
Sbjct: 61 VWNPKQYASDRSHLMPVITPAFPSMNSTYNVTETTKRIIMGEIERAHKL 109
>gi|212536855|ref|XP_002148583.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
gi|210068325|gb|EEA22416.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
Length = 1206
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 160/338 (47%), Gaps = 27/338 (7%)
Query: 80 GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQ--ETPLVEDLTPVPDARVPVI 137
GSY GV PS+DID L +G + F + + L+ E + L V ++
Sbjct: 648 GSYASGVWDPSSDIDCLVIG---SISPKTFMALMVQKLRRPEWQEIHILRKVKATSGTML 704
Query: 138 KFKFNGVSVDLLY--AQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVP 195
+ + GV DL Y A P+ L +L Q++L LN R + + +P
Sbjct: 705 EIQAGGVRFDLQYCAATSVTDSWPKALTLPSSDPTFDLPMQSLLKLNSHRDLEYLQRTIP 764
Query: 196 NIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV----LVSR 251
++ FR R ++ WAK RGIYS+ +G+LGGI+ LL+ARVC+L ++S
Sbjct: 765 DLATFRKAYRFIKAWAKFRGIYSSKLGYLGGIHITLLLARVCKLSFREAGATSVSDIISD 824
Query: 252 FFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSS 311
FF + ++ W N ++ Y P + R + M I++ P N ++ +
Sbjct: 825 FFFYYENFDWKNDMVYETTFYTGTPKY-------HRLSREPMVILSIHPPKVNVAHASTV 877
Query: 312 TTLRIMQEEFQRAKELCEEIEAGKRTWITLFEP---YHFFGSFKNYLQ--IHIAAKNAGD 366
+++ +++EF+RA +L E+ A TW + +P F ++ +Y++ +H AK A
Sbjct: 878 SSVHTLEQEFKRAAQLISEVGA---TWKNIADPSGVVQFLEAYSSYIKVDVHYWAKAAAK 934
Query: 367 FRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSE 404
R GW+E R L+ I R + R++P F++
Sbjct: 935 GRALFGWLEFRCVSLLVNINRGFPDI-HARIWPARFTD 971
>gi|326484937|gb|EGE08947.1| DUF455 domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 1212
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 198/446 (44%), Gaps = 82/446 (18%)
Query: 20 LEKI---LVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAK- 75
L+KI L D + EE+ + R V+ L I+ E I +A+ K
Sbjct: 595 LDKIVSSLEDSSMLPGEEDIVIRKTVVATLAQILT---------------EPIHDASGKD 639
Query: 76 ------LFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL--VEDLT 127
L GSY LG GP +D+D LC+G +T FF + L++ + +
Sbjct: 640 IKTPLVLIPVGSYGLGTWGPRSDVDCLCIGAISSTT---FFALAIQRLRKASALGIRIVR 696
Query: 128 PVPDARVPVIKFKFNGVSVDLLY---AQL-----QFSVIPEDLDSLQDSLLHNLDEQTVL 179
V A +++ + + +DL Y A++ + S IP D + D LH+L +
Sbjct: 697 KVKAATGVMLELQSGHIKLDLQYCPAAKIAERWQEVSRIPSH-DPIFDLSLHSLSK---- 751
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
L R + + +VP++ FR RC+ WAK G+YS+ G LGGI+ ++++R+ QL
Sbjct: 752 -LQPYRDQEYVKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMMLSRLHQL 810
Query: 240 YPNALPNV----LVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPI 295
V LV+ FF +AH+ W N +++ P + + +P M I
Sbjct: 811 IHERFGRVTVPELVAMFFHHYAHFDWKNNMVVSPGVHTRYRRSLREP----------MVI 860
Query: 296 ITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPY---------- 345
+T P N + V++ +LR + F+RA+EL E A W +
Sbjct: 861 LTAHVPTVNVARAVTAPSLRTIVSAFKRAEELIGEDGA---KWSNILNDISISQNNQTGA 917
Query: 346 -HFFGSFKNYLQIHIA--AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF 402
F ++ +Y+++++ + GW+ESR +L++ + R + G+ R++P F
Sbjct: 918 EKFLAAYNSYIKVNVQYWGPSPTQTSSLIGWLESRFFRLLNDLNRQVQGI-HGRIWPARF 976
Query: 403 -------SENSVKSSSQCHYFMGLGR 421
SEN ++ Q Y +GL R
Sbjct: 977 TSIDAPDSENDGETEYQGCYLVGLER 1002
>gi|326471780|gb|EGD95789.1| hypothetical protein TESG_03255 [Trichophyton tonsurans CBS 112818]
Length = 1212
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 194/439 (44%), Gaps = 79/439 (17%)
Query: 24 LVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAK-------L 76
L D + EE+ + R V+ L I+ E I +A+ K L
Sbjct: 602 LEDSSMLPGEEDIVIRKTVVATLAQILT---------------EPIHDASGKDIKTPLVL 646
Query: 77 FTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL--VEDLTPVPDARV 134
GSY LG GP +D+D LC+G +T FF + L++ + + V A
Sbjct: 647 IPVGSYGLGTWGPRSDVDCLCIGAISSTT---FFALAIQRLRKASALGIRIVRKVKAATG 703
Query: 135 PVIKFKFNGVSVDLLY---AQL-----QFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRV 186
+++ + + +DL Y A++ + S IP D + D LH+L + L R
Sbjct: 704 VMLELQSGHIKLDLQYCPAAKIAERWQEVSRIPSH-DPIFDLSLHSLSK-----LQPYRD 757
Query: 187 TDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPN 246
+ + +VP++ FR RC+ WAK G+YS+ G LGGI+ ++++R+ QL
Sbjct: 758 QEYVKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMMLSRLHQLIHERFGR 817
Query: 247 V----LVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
V LV+ FF +AH+ W N +++ P + + +P M I+T P
Sbjct: 818 VTVPELVAMFFHHYAHFDWKNNMVVSPGVHTRYRRSLREP----------MVILTAHVPT 867
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPY-----------HFFGSF 351
N + V++ +LR + F+RA+EL E A W + F ++
Sbjct: 868 VNVARAVTAPSLRTIVSAFKRAEELIGEDGA---KWSNILNDISISQNNQTGAEKFLAAY 924
Query: 352 KNYLQIHIA--AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF------- 402
+Y+++++ + GW+ESR +L++ + R + G+ R++P F
Sbjct: 925 NSYIKVNVQYWGPSPTQTSSLIGWLESRFFRLLNDLNRQVQGI-HGRIWPARFTSIDAPD 983
Query: 403 SENSVKSSSQCHYFMGLGR 421
SEN ++ Q Y +GL R
Sbjct: 984 SENDGETEYQGCYLVGLER 1002
>gi|327293125|ref|XP_003231259.1| hypothetical protein TERG_08045 [Trichophyton rubrum CBS 118892]
gi|326466375|gb|EGD91828.1| hypothetical protein TERG_08045 [Trichophyton rubrum CBS 118892]
Length = 1216
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 198/455 (43%), Gaps = 77/455 (16%)
Query: 6 TSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISD 65
S P L S E+ L D + EE+ R V+ L I+
Sbjct: 589 ASVPDTLS--SLDEIVSSLEDSSILPGEEDFKSRKTVVATLSQILT-------------- 632
Query: 66 EEQIQEANAK-------LFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQ 118
E I +++ + L GSY LG GP +D+D LC+G +T FF + L+
Sbjct: 633 -EPIHDSSGRDIKTPLVLIPVGSYGLGTWGPRSDVDCLCIGAISSTT---FFALAIQRLR 688
Query: 119 ETPL--VEDLTPVPDARVPVIKFKFNGVSVDLLYAQL--------QFSVIPEDLDSLQDS 168
+ + V A +++ + + +DL Y + S IP D + D
Sbjct: 689 RASALGIRIVRKVKAATGIMLELQSGHIKLDLQYCPAANIAERWQEVSRIPSH-DPIFDL 747
Query: 169 LLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGIN 228
LH+L + L R + I +VP++ FR RC+ WAK G+YS+ G LGGI+
Sbjct: 748 SLHSLSK-----LQPYRDQEYIKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIH 802
Query: 229 WALLVARVCQLYPNALPNV----LVSRFFKIFAHWKWPNPVMLCP-IQYQAMPHHVWDPR 283
+++ R+ QL V LV+ FF +AH+ W N +++ P +Q +
Sbjct: 803 ITMMLCRLHQLIHEKFGRVTVPELVAMFFHHYAHFDWKNNMVVSPGVQTRY--------- 853
Query: 284 SNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFE 343
+R + M I+T P N + V++ +LR + F+RA+EL E A +
Sbjct: 854 --RRSLREPMVILTVHAPTINVARAVTTPSLRTIVSAFKRAEELMGEDGAKWSNILNDIS 911
Query: 344 PYH--------FFGSFKNYLQIHIA--AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVL 393
H F ++K+Y+++++ + GW+ESR +L++ ++R + G+
Sbjct: 912 ISHNNQTGAEKFLAAYKSYIKVNVQYWGPSPTQASSLIGWLESRFFRLLNDLDRQVLGI- 970
Query: 394 QCRLYPGDF-------SENSVKSSSQCHYFMGLGR 421
R++P F SEN ++ Q Y +GL R
Sbjct: 971 HGRIWPARFTSIDAPDSENDGETEYQGCYLVGLER 1005
>gi|405977001|gb|EKC41474.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 323
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 123/236 (52%), Gaps = 17/236 (7%)
Query: 261 WPNPVMLCPIQYQA---MPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIM 317
WP PV+L + ++ + VWDPR N D HLMPIITP+YP N+++ V+ ++ IM
Sbjct: 3 WPQPVLLKSLVHENKHNLSFPVWDPRVNTSDMFHLMPIITPTYPHENTTFTVTLSSRSIM 62
Query: 318 QEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESR 377
EE + E+ +I G+ W LFEP +FF +K+YL + ++ D+ +W G+ ES+
Sbjct: 63 TEELKDGFEIVSKIYEGREEWGALFEPSNFFQKYKHYLVLTVSTVEEKDYLEWHGYAESK 122
Query: 378 LRQLIHMIERDMGGVLQCRLYPGDFSE-NSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMR 436
LR LI +ER+ + ++P N C +F+GL V ++ D+
Sbjct: 123 LRLLIGNLERN-PCIKLAHVHPSPLGPLNESDDEHLCRWFIGL---TFVKIENQNFVDLT 178
Query: 437 LTVEEFKSHV---VWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKR 489
++ F + V + + K GM++ + H++ + + +V PP+ L + KR
Sbjct: 179 FDIQSFTNTVHKQAYHINLMKDGMKVKIKHVKRRQLGLYV------PPEILLQSKR 228
>gi|242810869|ref|XP_002485671.1| DUF455 domain protein [Talaromyces stipitatus ATCC 10500]
gi|218716296|gb|EED15718.1| DUF455 domain protein [Talaromyces stipitatus ATCC 10500]
Length = 1206
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 193/444 (43%), Gaps = 35/444 (7%)
Query: 8 APTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEE 67
APT L + + + +L + SEEE R ++ ++ V + T++ ++
Sbjct: 585 APTSLTI--DVQFKTLLYGLNMIPSEEEFAHRHQMFKLIESAVHQRVFDATVETRLN--- 639
Query: 68 QIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQ--ETPLVED 125
+ + GSY LGV S+DID L +G F + + L+ E +
Sbjct: 640 ----ISFVVVPVGSYGLGVWDTSSDIDCLVIGTISPRT---FMALMVQKLRRPEWQEIHI 692
Query: 126 LTPVPDARVPVIKFKFNGVSVDLLY--AQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
L + A +++ + GV DL Y A P+ L+ +L Q++L LN
Sbjct: 693 LRKIKAASGTMLELQAGGVGFDLQYCAATSVAESWPKALELPSSDSTFDLPMQSLLKLNA 752
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL---- 239
R + + +P++ FR R ++ WAK RGIYS+ +G+LGGI+ LL+A VC+L
Sbjct: 753 VRDLEYLQRTIPDLATFRKAYRFIKAWAKCRGIYSSKLGYLGGIHITLLLALVCKLSFRE 812
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
+ ++ FF +AH+ W N ++ Y P + R + + I++
Sbjct: 813 SGATHESDILCTFFSYYAHFDWKNDLVYDTTYYTVEPKY-------HRSSREPLVILSIH 865
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
P N ++ + +++ ++EEF RA L + Y F ++ +Y+++ +
Sbjct: 866 PPKVNVAHASTVPSVKTLEEEFDRANRLISKAGVSWEDIAGQTGIYQFLNAYPSYIKVDV 925
Query: 360 A--AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSS-----Q 412
AK R GW+E R L+ I R V R++P F+ + + Q
Sbjct: 926 QYWAKAVAKGRALFGWLEFRCVSLLVDINRRFANV-HARIWPARFTNMKEEDTEDMEEYQ 984
Query: 413 CHYFMGLGRKQGVSPQDGEKFDMR 436
+ +GL R + S + + D +
Sbjct: 985 GCFLIGLARNEQPSTESATESDRK 1008
>gi|334121414|ref|ZP_08495483.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
gi|333455032|gb|EGK83696.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
Length = 1034
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 161/368 (43%), Gaps = 55/368 (14%)
Query: 79 FGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIK 138
GS R+GV +D+D +C+ P T + F ++ L L + V ARVPV++
Sbjct: 635 IGSGRIGVQSTHSDLDLICIIPVPLT-GETFLKQVQNRL--AGLCDRSQLVKSARVPVLR 691
Query: 139 FKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLV-PNI 197
+ GV+VDLL A + ++ L ++ D + + G D I+ +V P++
Sbjct: 692 MEIEGVAVDLLSATTMGQ--SQIIEPLSEAARPFFDAASWSAAVGILEADLIVDIVSPHL 749
Query: 198 R--NFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVA--------------RVCQ--- 238
F + LR +R WAK R I+ NA GFLG +WALL A R+
Sbjct: 750 SWDLFTNLLRAVRTWAKARQIHGNAWGFLGNFSWALLTAWTSIQCGDITPDSPRLLHSQE 809
Query: 239 --------------LYPNALPNVLVSRFFKIFAHWKWPNPVMLCP--IQYQAMPHHVWDP 282
L + L ++L++ FF+I + W P+ L QY
Sbjct: 810 NDGFVGAVSPCPPCLRDDQLLDILLAHFFQILSQHDWTQPIALTEGGKQYPV-------- 861
Query: 283 RSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLF 342
R + P+IT PC NS+ NV+ +T I++ E R E+ EE+ AG W TLF
Sbjct: 862 ----RKSREWFPVITSIEPCQNSTRNVTRSTAEILRRELGRGAEIAEEVLAGNTAWTTLF 917
Query: 343 EPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF 402
E +L + +++ G+ + GW+E L +E+ + + R PG
Sbjct: 918 ESADLPEQSNAFLVLTVSSAEVGELEKCGGWLEGNTIGLAINLEQKLN--IHVRPRPGIM 975
Query: 403 SENSVKSS 410
++ S+
Sbjct: 976 RRQNLVSA 983
>gi|315043460|ref|XP_003171106.1| DUF455 domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311344895|gb|EFR04098.1| DUF455 domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 1217
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 200/451 (44%), Gaps = 69/451 (15%)
Query: 6 TSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISD 65
TS P L S E+ L + L S E+ R V L I+ + I+ S
Sbjct: 590 TSLPDALS--SLDEIVACLENSSLLPSSEDLKSRKAVAATLAQILTEPIRD-------SS 640
Query: 66 EEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL--V 123
I+ L GSY LG P +D+D LC+G +T FF + L++ +
Sbjct: 641 GRDIKTPLV-LIPVGSYGLGTWSPDSDVDCLCIGAISSTT---FFSLAIQRLRKASALGI 696
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQL--------QFSVIPEDLDSLQDSLLHNLDE 175
+ V A +++ + + +DL Y + S IP + D + D LH+L +
Sbjct: 697 RIMRKVKAATGMMLELQSGNIKLDLQYCPAANIAERWQEVSRIPSN-DPIFDLSLHSLSK 755
Query: 176 QTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVAR 235
L R + I +VP++ FR RC+ WAK G+Y++ G LGGI+ ++++R
Sbjct: 756 -----LQPYRDQEYIKRMVPDMNVFRLAHRCITQWAKSSGVYTSKFGLLGGIHITMMLSR 810
Query: 236 VCQLYPNALPNV----LVSRFFKIFAHWKWPNPVMLCP-IQYQAMPHHVWDPRSNQRDRK 290
+ QL + V LV+ FF +AH+ W N +++ P +Q + +R +
Sbjct: 811 LHQLLHGKVGRVTIPELVAMFFHHYAHFDWKNSMVVSPGVQSRY-----------RRSMR 859
Query: 291 HLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFE------- 343
M I+T P N + V++ +LR + F+RA+EL E G R W +
Sbjct: 860 EPMVILTVHVPTVNVARAVTAHSLRTIASAFKRAEELLA--ENGAR-WSNILRDTSISHN 916
Query: 344 ----PYHFFGSFKNYLQIHIA--AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRL 397
F G+ +Y+++++ + GW+ESR +L++ ++R + GV R+
Sbjct: 917 KETGAEKFLGAHNSYIKVNVQYWGPSPTQASSLVGWIESRFFRLLNDLDRQVPGVY-GRI 975
Query: 398 YPGDF-------SENSVKSSSQCHYFMGLGR 421
+P F S + ++ Q Y +GL R
Sbjct: 976 WPARFTSKDSPDSPDDGETEYQGCYLVGLER 1006
>gi|302665431|ref|XP_003024326.1| hypothetical protein TRV_01524 [Trichophyton verrucosum HKI 0517]
gi|291188376|gb|EFE43715.1| hypothetical protein TRV_01524 [Trichophyton verrucosum HKI 0517]
Length = 1216
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 175/378 (46%), Gaps = 53/378 (14%)
Query: 76 LFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL--VEDLTPVPDAR 133
L GSY LG GP +D+D LC+G +T FF + L++ + + V A
Sbjct: 649 LIPVGSYGLGTWGPRSDVDCLCIGAISSTT---FFALAIQRLRKASALGIRIVRKVKAAT 705
Query: 134 VPVIKFKFNGVSVDLLYAQL--------QFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCR 185
+++ + + +DL Y + S IP + D + D H+L E L R
Sbjct: 706 GIMLELQSGHIKLDLQYCPAANVAERWQEISRIPFN-DPIFDLPPHSLSE-----LQPYR 759
Query: 186 VTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALP 245
+ I +VP++ FR RC+ WAK G+YS+ G LGGI+ ++++R+ QL
Sbjct: 760 DQEYIKRMVPDMYVFRLAHRCISQWAKSSGVYSSKFGLLGGIHITMMLSRLHQLIHEKCG 819
Query: 246 NV----LVSRFFKIFAHWKWPNPVMLCP-IQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
V LV+ FF +AH+ W N +++ P +Q + +R + M I+T
Sbjct: 820 RVTAPELVAMFFHHYAHFDWKNNMVVSPGVQTRY-----------RRSLREPMVILTVHV 868
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYH--------FFGSFK 352
P N + V++ +LR + F+RA+EL E A + H F ++
Sbjct: 869 PTINVARAVTAPSLRTIVSAFKRAEELMGEDGARWSNILNDISISHNNQTGAEKFLAAYN 928
Query: 353 NYLQIHIA--AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF-------S 403
+Y+++++ + GW+ESR +L++ ++R + G+ R++P F S
Sbjct: 929 SYIKVNVQYWGPSPTQASSLIGWLESRFFRLLNDLDRQVLGI-HGRIWPSRFTSIDATDS 987
Query: 404 ENSVKSSSQCHYFMGLGR 421
EN ++ Q Y +GL R
Sbjct: 988 ENDGETEYQGCYLVGLER 1005
>gi|258563048|ref|XP_002582269.1| predicted protein [Uncinocarpus reesii 1704]
gi|237907776|gb|EEP82177.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1040
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 182/412 (44%), Gaps = 55/412 (13%)
Query: 1 MEIISTSAP--TVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRL-DGIVKDWIKRV 57
M + STSA T + LE L + + +E + R V+ L D I + R
Sbjct: 594 MTVASTSASFLTPTKLFDRHSLELCLRESMMLPTEADVSKRQSVVDLLRDVITQGPAARA 653
Query: 58 TMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRML 117
G + E I L GSY LGV PS+DID L +GP + FF + L
Sbjct: 654 GDGSGNNPEPNIAMV---LVPVGSYGLGVWSPSSDIDCLVIGPISS---KTFFAVAEKRL 707
Query: 118 QE-TPL-VEDLTPVPDARVPVIKFKFNGVSVDLLY--------AQLQFSVIPEDLDSLQD 167
++ T L + L V A +++ + G+ DL Y A + S++P D D
Sbjct: 708 RKATDLGIRILRRVKAATGTMLELEVEGIKCDLQYCPASRVVEAWQRISLLPPD-----D 762
Query: 168 SLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGI 227
S + L Q + L R D I +P++ FR+ R + WAKRRGIY G+LGGI
Sbjct: 763 STFY-LSSQALTKLQAFRDVDYIRRSIPDLAAFRAAHRFITLWAKRRGIYLARFGYLGGI 821
Query: 228 NWALLVARVCQL---YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRS 284
+ ++++RVC+L A ++ RFFK + ++ W ++ P ++ P +
Sbjct: 822 HITMMLSRVCKLSCRKGGATSMDMICRFFKYYTNFDWEREILCDPSFFKDAPRY------ 875
Query: 285 NQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLF-- 342
+R M I+T P N + + S + R + +E QR EL I +W L
Sbjct: 876 -RRYANEPMVILTIHTPLVNIARSASKASTRTIIKELQRMDEL---ISTPDMSWSGLVGN 931
Query: 343 -----EPYHFFGSFKNYLQIH------IAAKNAGDFRQWKGWVESRLRQLIH 383
F ++ +Y++IH I AK + GW+ESR +L++
Sbjct: 932 ITASDSSQEFLKTYTSYIKIHVQYWGMILAKGSTLL----GWLESRCCRLLN 979
>gi|297597453|ref|NP_001043998.2| Os01g0702900 [Oryza sativa Japonica Group]
gi|222619129|gb|EEE55261.1| hypothetical protein OsJ_03164 [Oryza sativa Japonica Group]
gi|255673599|dbj|BAF05912.2| Os01g0702900 [Oryza sativa Japonica Group]
Length = 129
Score = 116 bits (291), Expect = 3e-23, Method: Composition-based stats.
Identities = 59/109 (54%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 140 KFNGVSVDLLYAQLQFSVIPEDLDSLQ--DSLLHNLDE-QTVLSLNGCRVTDRILSLVPN 196
+F GV VDL+YA + P Q S+L LD+ T SLNG RV D IL LVP
Sbjct: 2 RFRGVQVDLVYAGVCLPWCPTTWSGPQCDRSVLRGLDDLATARSLNGIRVADEILRLVPE 61
Query: 197 IRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALP 245
FR+ LRC++ WAK RG+YSN GFLGGI WA+LVAR+CQLYPN P
Sbjct: 62 TAVFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSP 110
>gi|302499068|ref|XP_003011530.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
gi|291175082|gb|EFE30890.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
Length = 1209
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 172/378 (45%), Gaps = 53/378 (14%)
Query: 76 LFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL--VEDLTPVPDAR 133
L GSY LG GP +D+D LC+G +T FF + L++ + + V A
Sbjct: 649 LIPVGSYGLGTWGPRSDVDCLCIGAISSTT---FFALAIQRLRKASALGIRIVRKVKAAT 705
Query: 134 VPVIKFKFNGVSVDLLYAQL--------QFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCR 185
+++ + + +DL Y + S IP D + D LH+L + L R
Sbjct: 706 GVMLELQSGHIKLDLQYCPAANVAERWQEISRIPSH-DPIFDLSLHSLSK-----LQPYR 759
Query: 186 VTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALP 245
+ I +VP++ FR RC+ AK G+YS+ G LGGI+ ++++++ QL
Sbjct: 760 DQEYIKRMVPDMYVFRLAYRCIVQRAKSSGVYSSKFGLLGGIHITMMLSQLHQLVHEKFG 819
Query: 246 NV----LVSRFFKIFAHWKWPNPVMLCP-IQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
V LVS FF +AH+ W N +++ P +Q + +R + M I+T
Sbjct: 820 RVTVPELVSMFFHYYAHFDWKNNMVVSPGVQTRY-----------RRSLREPMVILTVHV 868
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYH--------FFGSFK 352
P N + V++ +LR + F RA+EL E A + H F ++
Sbjct: 869 PTINVARAVTAPSLRTIVSAFNRAEELMGEDGARWSNILNDISISHNNQTGAEKFLTAYN 928
Query: 353 NYLQIHIA--AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF-------S 403
+Y+++++ + GW+ESR +L++ ++R G+ R++P F S
Sbjct: 929 SYIKVNVQYWGPSPTQASSLIGWLESRFFRLLNDLDRQALGI-HGRIWPARFTSIDTTDS 987
Query: 404 ENSVKSSSQCHYFMGLGR 421
EN ++ Q Y +GL R
Sbjct: 988 ENDGETEYQGCYLVGLER 1005
>gi|70917416|ref|XP_732847.1| poly(A) polymerase PAP [Plasmodium chabaudi chabaudi]
gi|56504096|emb|CAH75014.1| poly(A) polymerase PAP, putative [Plasmodium chabaudi chabaudi]
Length = 199
Score = 116 bits (290), Expect = 4e-23, Method: Composition-based stats.
Identities = 66/186 (35%), Positives = 110/186 (59%), Gaps = 3/186 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S PT D+ ++ ++L LF +E+ R +VLG ++ + +++ +++ +GI
Sbjct: 15 VSLDYPTEEDLKKGNDVVELLKSYNLFETEQALKKREKVLGMINKLFHEFVIELSISQGI 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+EE+ +E L+TFGSYRLGV P++DID + + P TR + FF + + LQ+ V
Sbjct: 75 -NEEEAKEIYGNLYTFGSYRLGVITPNSDIDCIFLAPQNVTR-EIFFNEFYLKLQQDRNV 132
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSL-QDSLLHNLDEQTVLSLN 182
+ L +P+ P+I+F ++ V +DLL A L + + + +L D +L NLDE TV SLN
Sbjct: 133 KKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCRYTLDNDYILKNLDEVTVRSLN 192
Query: 183 GCRVTD 188
G RV D
Sbjct: 193 GIRVAD 198
>gi|391865116|gb|EIT74407.1| hypothetical protein Ao3042_09684 [Aspergillus oryzae 3.042]
Length = 973
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 155/333 (46%), Gaps = 33/333 (9%)
Query: 80 GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKF 139
GSY GV S+D+D L +G R ++ +V L V A +++
Sbjct: 642 GSYGFGVWNSSSDMDILVIGQVSPRTFFALIIAKLRRATDSDVVL-LRKVKAASGIMLEL 700
Query: 140 KFNGVSVDLLYAQLQFSV--IPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNI 197
+ GV VDL Y V P+ L+ D +L Q++L LN R + +P++
Sbjct: 701 EVRGVRVDLQYCAATRVVESWPQALELPADHSTFDLPMQSLLKLNSLRDMHYLQRTIPDL 760
Query: 198 RNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV----LVSRFF 253
+FR R ++ WA+RRGIYS+ +G+LGGI+ LL+AR+C L + +++ FF
Sbjct: 761 ASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAADIITTFF 820
Query: 254 KIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTT 313
K +A + W V+ P Y++ P + R ++ + I++ P N + S +
Sbjct: 821 KHYAQFNWEKQVVYDPSFYKSPPRYF-------RPQREPLVILSQHQPKVNVARAASIPS 873
Query: 314 LRIMQEEFQRAKELCEEIEAGKRTWITLFEPY-------HFFGSFKNYLQIHIAAKNAGD 366
R + +EFQRA +L + + TW L F S+++Y ++++
Sbjct: 874 TRTLVQEFQRADKLLSQQDV---TWEQLAGSIENSTGADEFLKSYRSYAKVNV------- 923
Query: 367 FRQWKGWVESRLRQLIHMIERDMGGVLQCRLYP 399
Q+ G ++ R L+ +E +L RL+P
Sbjct: 924 --QYWGGAATKGRMLVGWLEWRCVSLLVGRLHP 954
>gi|125527403|gb|EAY75517.1| hypothetical protein OsI_03421 [Oryza sativa Indica Group]
Length = 129
Score = 115 bits (288), Expect = 6e-23, Method: Composition-based stats.
Identities = 59/109 (54%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 140 KFNGVSVDLLYAQLQFSVIPEDLDSLQD--SLLHNLDE-QTVLSLNGCRVTDRILSLVPN 196
+F GV VDL+YA + P Q S+L LD+ T SLNG RV D IL LVP
Sbjct: 2 RFRGVQVDLVYAGVCLPWCPTTWSGPQRDRSVLRGLDDLATAHSLNGIRVADEILRLVPE 61
Query: 197 IRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALP 245
FR+ LRC+ WAK RG+YSN GFLGGI WA+LVAR+CQLYPN P
Sbjct: 62 TAMFRTMLRCVNHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSP 110
>gi|342879986|gb|EGU81216.1| hypothetical protein FOXB_08249 [Fusarium oxysporum Fo5176]
Length = 1207
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 206/464 (44%), Gaps = 52/464 (11%)
Query: 14 VISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEAN 73
+ +++ LE L +E+E RVE + L+ ++KD ++ + S I
Sbjct: 592 LANSESLEDFLEGRGCLPNEQERTDRVEAIKTLEMVLKDATSSISENDSRSGPAFI---- 647
Query: 74 AKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFG-KLFRMLQETPL-VEDLTPVPD 131
+ GSY LGV S+DID LC+GP + FF + R+ + T L V L V
Sbjct: 648 --VVPVGSYGLGVWTSSSDIDCLCIGPFSSKT---FFALAVQRLKRATTLGVRILRRVKA 702
Query: 132 ARVPVIKFKFNGVSVDLLY--AQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDR 189
+++ + NG+ VDL Y A PE + L Q + L R
Sbjct: 703 NSGNMLELEVNGIKVDLQYCAAASIAERWPEVMKRPASDPAFALSFQALAKLKPVRDLFY 762
Query: 190 ILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQ--LYPN--ALP 245
+ +P++ +R ++ WA+ RGIYS GFLGGI+ ++L+ VC+ Y N P
Sbjct: 763 LRRSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVPVCKAVAYENETVTP 822
Query: 246 NVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNS 305
+V FF ++ + W N ++ P ++ + R N+ R+ L +I P N+
Sbjct: 823 ADIVVTFFHYYSEFDWKNSMVFDPFFHKEL-------RYNRTFREPLC-LIGWHAPALNT 874
Query: 306 SYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLF--EP------------YHFFGSF 351
+ S T+ + EF RAK + + + W L EP F +F
Sbjct: 875 APIASIPTVATISSEFGRAKRMLSDDDC---IWGKLLGIEPETALGSVQAPAATEFLHAF 931
Query: 352 KNYLQI--HIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPG---DFSENS 406
K Y++I H + ++ GW+ESR L+ I R + +L R++P D S +
Sbjct: 932 KTYIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDINRKLKHLL-ARIWPSRFLDVSAGA 990
Query: 407 VKSSSQCH--YFMGLGRKQGVSPQDGEKFDMRL--TVEEFKSHV 446
S ++ H Y +GL + +D ++ M + +++F++ +
Sbjct: 991 ETSGAEYHGCYLIGLAWDDDSNKEDAKEVGMAMQTVLQDFEARI 1034
>gi|308482424|ref|XP_003103415.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
gi|308259836|gb|EFP03789.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
Length = 388
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 102/168 (60%), Gaps = 16/168 (9%)
Query: 279 VWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTW 338
VWDPR N DR HLMPIITP++P NS++NVS +TL I+QEE + A +C++I AG TW
Sbjct: 156 VWDPRINYSDRFHLMPIITPAFPEQNSTHNVSKSTLHIIQEEMKSALLICDQIHAGSATW 215
Query: 339 ITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLY 398
LFE +FF +++++ + + ++ +G+ ESR+RQL+ ++ER+ V +
Sbjct: 216 NNLFEEVNFFSRYRHFVALSMNEESN------EGFFESRIRQLVQIMERNC-QVKLAHIN 268
Query: 399 PGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHV 446
P F SV+++S +F+GL + V + D+ +E FK +V
Sbjct: 269 PKKFK--SVQNASV--WFLGLELIENV-----KNLDLTAEIEGFKKNV 307
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 78/134 (58%), Gaps = 3/134 (2%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IST+APT D T L + L + + S+EES+ R++VL +L+ +VK WIK +T +
Sbjct: 16 ISTNAPTKSDFKLTDSLNESLHQFECYESKEESMTRIKVLSKLNALVKQWIKTLTAQRIP 75
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ E A KL +FGSYRLGV DIDAL + P + R DFF +ML E V
Sbjct: 76 NGHE--LNAGGKLISFGSYRLGVHNSGADIDALVIAPRHVARL-DFFTSFKKMLLENSSV 132
Query: 124 EDLTPVPDARVPVI 137
++L V +A VP++
Sbjct: 133 KNLACVENAFVPIM 146
>gi|154282695|ref|XP_001542143.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410323|gb|EDN05711.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1178
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 186/429 (43%), Gaps = 65/429 (15%)
Query: 54 IKRVTMDKGISDEEQIQEANAKLF-----TFGSYRLGVAGPSTDIDALCVGPCYATRHDD 108
+K + D +S+ +E F T GS LGV S+DID LCVG A +
Sbjct: 615 LKHIIQDGSLSEPSNGEEIGRSKFSIVVTTVGSSGLGVWTESSDIDCLCVGSISA---NV 671
Query: 109 FFGKLFRMLQE--TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQ--------LQFSVI 158
FF + + L+ V+ + V A +++ + NG+ DL Y L+ +
Sbjct: 672 FFELIIQRLRNRIDLGVKIIRRVKPAFGTMLELEINGIKFDLQYCPAAAVAKRWLEVPNL 731
Query: 159 PEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYS 218
P Q S L NL + L R + + N FR R ++ WAK RGIYS
Sbjct: 732 P------QSSPLFNLSLIPRMKLQPYRDQAYLQRTIRNPATFRLLHRIIKGWAKYRGIYS 785
Query: 219 NAMGFLGGINWALLVARVCQLY---PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAM 275
+ G+LGGI+ L+++R+ +L P + ++L + FF + ++ W + PI ++
Sbjct: 786 SRFGYLGGIHITLMLSRLMKLLPPNPGSAADILCT-FFNHYGNFNWEKDAVYDPIFHEKP 844
Query: 276 PHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGK 335
P + PR M I T P N + + S ++R + +E +RA+ L E G
Sbjct: 845 PRNYRPPREG-------MIIFTLHTPIINVARSTSIPSMRKIVDEMKRAENLISE---GN 894
Query: 336 RTWITLFEPY-------------HFFGSFKNYLQIHIA--AKNAGDFRQWKGWVESRLRQ 380
W L Y F S+ +Y++I++ + + GWVESR
Sbjct: 895 ANWAELLGVYPKPGKSALSSSADEFLKSYNSYIKINVQYWSLSLAKGSSLVGWVESRCLD 954
Query: 381 LIHMIERDMGGVLQCRLYPGDFSENSVKSSS---------QCHYFMGLGRKQGVS--PQD 429
L++ + R+ + Q R++P F++N +S Q Y +GL + + +
Sbjct: 955 LLNDLYREFPDI-QARIWPARFTQNEEHENSTPAQEEHEYQGCYLVGLRKADHATDPTRT 1013
Query: 430 GEKFDMRLT 438
KFD +L
Sbjct: 1014 FSKFDRKLA 1022
>gi|336268012|ref|XP_003348771.1| hypothetical protein SMAC_01794 [Sordaria macrospora k-hell]
gi|380094029|emb|CCC08246.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1302
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 191/459 (41%), Gaps = 55/459 (11%)
Query: 20 LEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAK---- 75
L + + + +F S EE R L I+ D + ++D E A+
Sbjct: 654 LTEAMAELNIFPSHEEISKRKAAFHALKIILLDNPPPNQYPQAVTDTTTASETQARSNQP 713
Query: 76 ---LFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDA 132
+ GS+ LGV S+DID L +GP + R +PL P
Sbjct: 714 PLIITPVGSFALGVHTSSSDIDVLAIGPFSTNTFFSLAIQRLRRASSSPLFSSYQPKILR 773
Query: 133 RV-----PVIKFKFNGVSVDLLY--AQLQFSVIPEDLDSLQ-DSLLHNLDEQTVLSLNGC 184
R+ +++ N + DL Y A S P L + + + +L T+ L
Sbjct: 774 RIYSSTGTMLELSVNQIKFDLQYCPAAHIASNWPRILSTAPPGNAVWSLPALTLTKLKAA 833
Query: 185 RVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARV------CQ 238
R D + VP++ FR+ R +R WAK RG+Y+ G+LGGI ++++ARV Q
Sbjct: 834 RDLDYLRRTVPDLAVFRTAHRAVRSWAKARGVYAQRFGYLGGIQISVMLARVYKALALTQ 893
Query: 239 LYPNALPNVLVSRFFKIFAHWKWPNPVM---LCPIQYQAMPHHVWDPRSNQRDRKHLMPI 295
LV+ FF+ +A + W ++ +CP ++ + +R + M +
Sbjct: 894 GVTRVGVEELVASFFEEYARFHWGRDMVYDEVCP-WFRQKREKGGEKEVYRRTSREAMVV 952
Query: 296 ITPSYPCTNSSYNVSSTTLRIMQEEFQRAKE--LCEEIEAGKRTWITLFE----PYHFFG 349
+ P N+S S ++R ++EEF+RA++ + EE+ R+W E F
Sbjct: 953 LGWFGPGLNTSGQASVWSVRTLKEEFERARDQLVKEEV----RSWKEFLEGSSAAEEFLT 1008
Query: 350 SFKNYLQIHIAAKNAGDFR--QWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSV 407
+K+Y+++ + R Q+ GW+ESRL L+ + R GV R++P F E +
Sbjct: 1009 GYKSYVKVDVQYWGLSPSRGAQFVGWLESRLVMLLVDLHRRAPGVY-VRMWPARFVEADM 1067
Query: 408 KSSS-----------------QCHYFMGLGRKQGVSPQD 429
S Q Y +GL S +D
Sbjct: 1068 ASQQAEADEQTATEGTGPRDYQASYLLGLDADISTSKED 1106
>gi|367022686|ref|XP_003660628.1| hypothetical protein MYCTH_2299149 [Myceliophthora thermophila ATCC
42464]
gi|347007895|gb|AEO55383.1| hypothetical protein MYCTH_2299149 [Myceliophthora thermophila ATCC
42464]
Length = 1260
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 180/414 (43%), Gaps = 37/414 (8%)
Query: 14 VISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQ-EA 72
+ S +++ L ++ SE E+ R L D +K V +D +D + +
Sbjct: 630 LASAGSVKEALAALQVIPSEGEATKRKRAL--------DLLKSVVLDTPSADAAGARSQP 681
Query: 73 NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL--VEDLTPVP 130
+ GSY LGV S+DID LC+GP + + FF + +++ ++ L V
Sbjct: 682 TVVVVPVGSYALGVWTSSSDIDVLCIGPFSS---NTFFALASQRVRKAAAQGIKLLRRVR 738
Query: 131 DARVPVIKFKFNGVSVDLLY--AQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTD 188
+++ + +GV VDL Y A P+ L + +L QT+ L R D
Sbjct: 739 AHTGTMLELEVHGVKVDLQYCPAASVAERWPDVLRIPSSDPVWSLSAQTLSKLKAIRDAD 798
Query: 189 RILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN-----A 243
+ VP++ FR R ++ WAK RGIY+ GFL GI ++L+ARV +L
Sbjct: 799 YLRRSVPDLTTFRLAHRFVKTWAKSRGIYAARFGFLSGIQISVLLARVQKLLAREAGAPP 858
Query: 244 LPNVLVSRFFKIFAHWKWPNPVMLCPI-QYQAMPHHVWDPRSNQRDRKHLMPIITPSYPC 302
P L+ FF +A + W + P+ + +P+ R + + I+ P
Sbjct: 859 TPEALIVTFFHHYAAFDWSAQLAFDPLFHRRRLPY--------SRTAREPLAILGYFPPA 910
Query: 303 TNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPY----HFFGSFKNYLQIH 358
N++ S + + + EF+RA + +W +L F ++K+Y+++
Sbjct: 911 LNTALAASVPSTKTLAAEFRRASDALRSATDPPASWSSLLSVSAGRDEFLAAYKSYVKLD 970
Query: 359 IAAKNAGDFR--QWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSS 410
+ R Q+ GW+ESR L+ + R G L R++P F E S
Sbjct: 971 VQYWGLSLSRGAQFLGWLESRCVMLLVDLHRRAPG-LHVRMWPARFVERDSNGS 1023
>gi|440789896|gb|ELR11187.1| EGFlike domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 904
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 108/203 (53%), Gaps = 27/203 (13%)
Query: 215 GIYSNAMGFLGGINWALLVARVC---QLYPN-----------ALPNVLVSRFFKIFAHWK 260
G+YSNA+GFLGG +W++LVA VC +LY ++ L++ FF+++ HW
Sbjct: 693 GLYSNAVGFLGGFSWSVLVAYVCKNSKLYAKSAAAASGDGDLSIEERLLAEFFEVYNHWD 752
Query: 261 WPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEE 320
W PV + P + P H D MPI+TP+ P NS+ NV+ +TL MQ+E
Sbjct: 753 WQQPVAITPGSARYKPGHKSDK----------MPIVTPTPPFNNSARNVARSTLTEMQQE 802
Query: 321 FQRAKELCEEIEAGKRTWIT-LFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLR 379
F RA ++ + + + L +P +FF + YL + + + ++ + + GW+ESRL
Sbjct: 803 FFRAFDITQAPQWNSEAGLNDLLQPTNFFKDYHYYLMVEVHSLSSDEVTKCLGWLESRLI 862
Query: 380 QLIHMIERDMGGVLQCRLYPGDF 402
LI +E++ R +PG F
Sbjct: 863 ALIFDLEKNP--QTYARPFPGTF 883
>gi|345562420|gb|EGX45488.1| hypothetical protein AOL_s00169g94 [Arthrobotrys oligospora ATCC
24927]
Length = 1237
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 160/366 (43%), Gaps = 47/366 (12%)
Query: 75 KLFTFGSYRLGVAGPSTDIDALCVG----PCY----ATRHDDFFGKLF---RMLQETPLV 123
+L GS+ LG ++D D L +G P + R F GK + L
Sbjct: 622 RLVPVGSFGLGTYTSTSDTDILAIGSISTPLFWRIAKQRIKRFRGKAADSSSLTSSDALS 681
Query: 124 EDLTPVPDARVPVIKFKF-NGVSVDLLYAQL-----QFSVIPEDLDSLQDSLLHNLDEQT 177
+ DA +P++ + + +DL Y F IP L +S L NL T
Sbjct: 682 VKIVRYVDATIPMLILLIGDKIRIDLQYTTAVSVLSNFDTIP--FQPL-NSPLWNLTVPT 738
Query: 178 VLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVC 237
+ L R +LS +PN+ +R R ++ WA+++G+YS+ GF GG++ +LL+ARV
Sbjct: 739 LKKLQAWRDLLFLLSRIPNLAKYRLAYRFIKLWAEKKGVYSSKFGFFGGVHISLLLARVA 798
Query: 238 QLY-PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPII 296
L P A + L++ FF ++ KW + V+ P + + + QR + M I+
Sbjct: 799 MLLPPTATASQLIAAFFTHYSTTKWDDSVIFMPGTGKVLRY--------QRATRDKMVIL 850
Query: 297 TPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCE------------EIEAGKRTWITLFEP 344
T + P N + N + T+ + E ++A E + K I + E
Sbjct: 851 TINTPVINVAANATIHTVHTLSSELEKAAAKFELDATFSDVVGSFGDDTSKEIPIGVNE- 909
Query: 345 YHFFGSFKNYLQIHIA--AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF 402
F G + Y+++ + N R GWVESRL L+ + R G L R++PG F
Sbjct: 910 --FLGGYNRYIKVDVQFWGLNRQGGRALVGWVESRLVGLLVELGRQTPG-LDARIWPGRF 966
Query: 403 SENSVK 408
E +
Sbjct: 967 HETKAQ 972
>gi|349603143|gb|AEP99064.1| Poly(A) polymerase gamma-like protein, partial [Equus caballus]
Length = 435
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 163/329 (49%), Gaps = 45/329 (13%)
Query: 288 DRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHF 347
DR HLMPIITP+YP NS+YNVS++T +M EEF++ + +EI GK W L EP +F
Sbjct: 1 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 60
Query: 348 FGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSE 404
F +++Y+ + +A + +W G VES++R L+ +ER+ L + +PG+ E
Sbjct: 61 FQKYRHYIVLTASASTEENHSEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KE 119
Query: 405 NSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHV 461
+ ++ +F+G+ ++ V + D+ ++ F V ++ K+GM+I
Sbjct: 120 HHKDNNYVSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEA 178
Query: 462 SHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKSESSTAGHSSGQKSSQTE- 520
+H++ + + ++ P + +KK+ K+S S + SSG +S ++
Sbjct: 179 THVKKKQLHHYL-------PAEILQKKK-----------KQSLSDVSRSSSGLQSKRSSL 220
Query: 521 SGVALDGSHGLKSGPSVEPSTSSVSSSTSASSRPQRPAVSIETEDDNAT----------S 570
G LD S +G P S V ST+ S+P P ETE +NA S
Sbjct: 221 DGSCLDSSRDTDNG---TPFNSPV--STNKPSKPDVPPAG-ETERNNAEPAAVIVEKPLS 274
Query: 571 VSQAQNFN--QVGATVAAALATGTISSFC 597
+ AQ + +GA V +A+ + + C
Sbjct: 275 IPPAQGLSIPVIGAKVDSAVKAVSPPAVC 303
>gi|402576343|gb|EJW70302.1| hypothetical protein WUBG_18790, partial [Wuchereria bancrofti]
Length = 79
Score = 110 bits (275), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/76 (59%), Positives = 55/76 (72%)
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA 243
CRV D IL LVPNI NF LR ++ WAK GIYSN +G+LGG++WA+LVAR CQLYPN
Sbjct: 1 CRVADEILRLVPNISNFTYALRAIKLWAKNHGIYSNVLGYLGGVSWAILVARTCQLYPNT 60
Query: 244 LPNVLVSRFFKIFAHW 259
P LV +FF ++ W
Sbjct: 61 GPARLVQKFFLLYTKW 76
>gi|124003256|ref|ZP_01688106.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
ATCC 23134]
gi|123991354|gb|EAY30785.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
ATCC 23134]
Length = 982
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 147/327 (44%), Gaps = 29/327 (8%)
Query: 76 LFTFGSYRLGVAGPSTDIDALC-VGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARV 134
L FGS L +A +DID LC + P A D FF +L L + + + + V DARV
Sbjct: 625 LQVFGSELLKIAQAHSDIDVLCPLPPSLAL--DPFFDQLQTALSQ--VAQGVHLVTDARV 680
Query: 135 PVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLV 194
+KF GV+ DLL + P L ++ D + ++ G +IL+L
Sbjct: 681 TTLKFNLQGVNFDLL--AVHHPSFPVPLHQVKPEAFQQFDPLSWQNMVGYLEGQKILALG 738
Query: 195 PNIRN--FRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVA---RVCQLYPNALPNVLV 249
+ FR +R +R WA R+ + N GF G I+WA+L A CQ L+
Sbjct: 739 NKVGQTLFRDLVRTIRLWAARKQLTGNVFGFFGNISWAILAAWSCAHCQTKHTPTLEHLL 798
Query: 250 SRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKH--LMPIITPSYPCTNSSY 307
FF + A W P+ L + S+ RKH MP+++ YP N++
Sbjct: 799 QNFFDLLAQHSWVIPIGLQ------------EGTSSYIVRKHRDWMPVVSAFYPYKNTTR 846
Query: 308 NVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDF 367
N++ +T +++Q E Q+A+ L + W+T F + L + ++A N +
Sbjct: 847 NLTQSTAKVIQGEIQKARLLLQNTSIN---WLTFFAATDVQKEYTQLLILELSASNEQNL 903
Query: 368 RQWKGWVESRLRQLIHMIERDMGGVLQ 394
+G + L +I +E+ + +++
Sbjct: 904 ELAQGKLLGSLLGVILALEQQVKALVR 930
>gi|346325053|gb|EGX94650.1| DUF455 domain protein [Cordyceps militaris CM01]
Length = 1223
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 187/448 (41%), Gaps = 54/448 (12%)
Query: 18 KELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLF 77
++L+K L+ +E++ R + + LD ++ + D+ SD+E L
Sbjct: 599 EDLKKTLLSHGYLPTEDDESMRKQAISVLDSVL------LGNDQTKSDQEARTPVGLVLV 652
Query: 78 TFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRM-LQETPLVED-----LTPVPD 131
GS+ LGV S+D+D LC+G + FRM LQ D L V
Sbjct: 653 PVGSFGLGVWMSSSDVDCLCIGTISSK-------TFFRMALQRLRKASDQGIRVLRKVLA 705
Query: 132 ARVPVIKFKFNGVSVDLLY--AQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDR 189
+++ + G+ DL Y A F P ++ + +L QT+ L R
Sbjct: 706 NTGTMLELQILGIKFDLHYCAATSVFEKFPSVMNLPSNHPEFSLPVQTLAKLKPARDMYY 765
Query: 190 ILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV-- 247
+L +P++ FR ++ WA RGIY G LGGI+ +L+ +C+ V
Sbjct: 766 LLRSIPDLAKFRVAFLMIKAWASSRGIYGARFGLLGGIHITVLLVPICKQLATLSRVVST 825
Query: 248 --LVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNS 305
+++ FF + ++ W V+L P ++ + +H R + ++ P N+
Sbjct: 826 TGILATFFSHYTNFDWEKQVVLDPFFHKELRYH--------RTSREPFCLLGWHAPALNT 877
Query: 306 SYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPY--------HFFGSFKNYLQI 357
+ S+ T++ + E + L + TW + P F FK+Y+++
Sbjct: 878 AMTASTPTVKSIATEISKTNSLLSQPGV---TWDAILGPVGAAVAGVQDFLRGFKSYVKV 934
Query: 358 --HIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF-----SENSVKSS 410
+ R++ GW+ESR ++ + R +L R++PG F +E + S
Sbjct: 935 DARFWGSSPSSGRKFLGWLESRCVAILVDMNRKAPALLP-RIWPGRFIDAPVTETATNSE 993
Query: 411 SQCHYFMGLGRKQGVSPQDGEKFDMRLT 438
Q Y +GL G S D K D + T
Sbjct: 994 YQGFYLIGLAWNDGDS--DRAKEDTKAT 1019
>gi|169617838|ref|XP_001802333.1| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15]
gi|160703499|gb|EAT80511.2| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15]
Length = 1179
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 177/430 (41%), Gaps = 65/430 (15%)
Query: 17 TKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKL 76
+ EL+ +L +F SEEE R + L + +KRV D + +
Sbjct: 608 SAELDSVLASGGMFPSEEEVQQRKDAL--------EILKRVVYGTSSDDVTSTSDVPMII 659
Query: 77 FTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPV 136
GSY LGV +DID LC+G T F KL R + L D V V
Sbjct: 660 VPVGSYALGVWTSGSDIDCLCIG----TISSKTFFKLAR--------QRLVKAHDQGVRV 707
Query: 137 IKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPN 196
++ K + +L +F+ +P + NL ++ L R I +P+
Sbjct: 708 LR-KVEANTGTMLELWSEFAGLP------ASDPIFNLSILSLRKLKPYRDLLYIQRTLPS 760
Query: 197 IRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV----LVSRF 252
+ FR RC++ WA RRGIYS G+LGG++ L+++ + + ++ LVS F
Sbjct: 761 LSAFRLAYRCIKLWAVRRGIYSAKFGYLGGVHITLMLSWAAKCLAHDSGSITAPDLVSSF 820
Query: 253 FKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSST 312
F FAH+ W N +M Y A H PR ++ R+ P++ + NS+ +ST
Sbjct: 821 FHHFAHFNWTNDMM-----YDAF-FHKQKPRYHRSARE---PMVVLGFHAPNSNIAHTST 871
Query: 313 T--LRIMQEEFQRAKELCEEIEAGKRTWITLF---------------EPYHFFGSFKNYL 355
L + E + A E + TW F F + +Y+
Sbjct: 872 LPGLHTLVSEMKAADEALSD---PSMTWKKFFGSTDNSPQAALSPISGASDFLSAHSSYV 928
Query: 356 QIHIA--AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQC 413
+I I + + GWVESR L+ I + M L R++P F+++
Sbjct: 929 KIDIQFWGRTLAKGKSLVGWVESRCLSLVVDIYK-MLPDLAVRIWPARFTDSDTIEGGDY 987
Query: 414 H--YFMGLGR 421
H Y +GL R
Sbjct: 988 HGCYLIGLSR 997
>gi|225561466|gb|EEH09746.1| DUF455 domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 1256
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 174/410 (42%), Gaps = 67/410 (16%)
Query: 54 IKRVTMDKGISDEEQIQEANAKLF-----TFGSYRLGVAGPSTDIDALCVGPCYATRHDD 108
+K + D +S+ +E F T GS LGV S+DID LCV A +
Sbjct: 656 LKHIIQDSSLSEPSNGEEIGRSKFSIVVTTVGSSGLGVWTESSDIDCLCVSSISA---NV 712
Query: 109 FFGKLFRMLQE--TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQ--------LQFSVI 158
FF + + L+ V+ + V A +++ + NG+ DL Y L+ +
Sbjct: 713 FFELIIQRLRNRIDLGVKIIRRVKPAFGTMLELEINGIKFDLQYCPAAAVAERWLEVPNL 772
Query: 159 PEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYS 218
P Q S L NL + L R + + N FR R ++ WAK RGIYS
Sbjct: 773 P------QSSPLFNLSLIPRMKLQPYRDQAYLQRTIQNPATFRLLHRIIKGWAKYRGIYS 826
Query: 219 NAMGFLGGINWALLVARVCQLYPNALPNV-----LVSRFFKIFAHWKWPNPVMLCPIQYQ 273
+ G+LGGI+ L+++R+ +L P PN ++ FF + ++ W + PI +
Sbjct: 827 SRFGYLGGIHITLMLSRLMKLLP---PNPGSAADILCTFFNHYGNFNWGKDAVYDPIFHG 883
Query: 274 AMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEA 333
P + PR M I T P N + + S ++R + +E +RA+ L E
Sbjct: 884 KPPRNYRPPREG-------MIIFTLHTPIINVARSTSIPSMRKIVDEMKRAENLISE--- 933
Query: 334 GKRTWITLFEPY-------------HFFGSFKNYLQIHIA--AKNAGDFRQWKGWVESRL 378
G W L Y F S+ +Y++I++ + + GWVESR
Sbjct: 934 GNANWAELLGIYPKTGKSALSSSADEFLKSYNSYIKINVQYWSLSLAKGSSLVGWVESRC 993
Query: 379 RQLIHMIERDMGGVLQCRLYPGDFSENSVKSSS---------QCHYFMGL 419
L+ + R+ + Q R++P F++N +S Q Y +GL
Sbjct: 994 LDLLDDLYREFPDI-QARIWPARFTQNEDHENSTPAQEEHEYQGCYLIGL 1042
>gi|389628670|ref|XP_003711988.1| hypothetical protein MGG_06121 [Magnaporthe oryzae 70-15]
gi|351644320|gb|EHA52181.1| hypothetical protein MGG_06121 [Magnaporthe oryzae 70-15]
gi|440474755|gb|ELQ43479.1| DUF455 domain-containing protein [Magnaporthe oryzae Y34]
gi|440487378|gb|ELQ67170.1| DUF455 domain-containing protein [Magnaporthe oryzae P131]
Length = 1238
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 169/376 (44%), Gaps = 48/376 (12%)
Query: 61 KGISDEEQIQEANAKLFTF--GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQ 118
+G+SD + + + GS+ LGV+ S+DID LC+GP ++ FF + ++
Sbjct: 647 EGVSDASEYDRLRSSIIMVPVGSWGLGVSTLSSDIDCLCIGPLSSST---FFALTTQRIK 703
Query: 119 ETPLVEDLTPVPDARVP-----VIKFKFNGVSVDLLY--AQLQFSVIPEDLDSLQDSLLH 171
+ + L RV +++ + V VDL Y A P L + +
Sbjct: 704 KASVESGLEIKLLRRVRANSGVMLELEVMSVRVDLQYCAATAVAEQWPAVLKLPPNDPIF 763
Query: 172 NLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWAL 231
L QT+ L R D + +P++ FR R ++ WA+ RGIYS G+LGGI ++
Sbjct: 764 ALPAQTLGKLKALRDLDYLRETIPDLSKFRLAHRAIKTWAQSRGIYSAKFGYLGGIQVSI 823
Query: 232 LVARVCQLYPN------ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSN 285
L+ARVC+L ++P++L S FF +A + W N + P ++ + +
Sbjct: 824 LLARVCKLLARDYGQEVSVPDIL-SSFFSHYASFDWRNKIAFDPFFHKKLNY-------- 874
Query: 286 QRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLF--- 342
R + + I+ P N++ + +++ + E +A EL E TW T F
Sbjct: 875 LRSAREPLAILGFFPPALNTTLAATVPSMKAIARELSQANELLNE---DGMTWDTFFGAS 931
Query: 343 ----EPYH--------FFGSFKNYLQIHIA--AKNAGDFRQWKGWVESRLRQLIHMIERD 388
+ H F S+K++++I + + Q+ GW+ESR L+ + R
Sbjct: 932 SAGGDKTHSLARGAADFLSSYKSFVKIELQYWGISLSKGSQFIGWLESRCPLLLVDMSRR 991
Query: 389 MGGVLQCRLYPGDFSE 404
+ L R++P F E
Sbjct: 992 LPQ-LNFRIWPQRFVE 1006
>gi|327357117|gb|EGE85974.1| DUF455 domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 1251
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 179/415 (43%), Gaps = 54/415 (13%)
Query: 20 LEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTM-DKGISDEEQIQEANAKLFT 78
L+ L D+ + S E++ R ++K+ I+ ++ + G E + + T
Sbjct: 628 LKVCLADKSIVPSSEDAEKRKAAFS----LLKNLIQHGSLPESGKGKEIDQPRLSIVVTT 683
Query: 79 FGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL--VEDLTPVPDARVPV 136
GSY LGV S+D+D LCVG + FF + L++ V+ L V A +
Sbjct: 684 VGSYGLGVWTDSSDVDCLCVGSISSKV---FFELTLQRLKKGAEWDVKILRKVKAATGTM 740
Query: 137 IKFKFNGVSVDLLYAQ--------LQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTD 188
++ + N V DL Y L+ +P + S L +L ++ L R
Sbjct: 741 LELEINSVKFDLQYCPAAAVAERWLEVPHLP------RSSPLFDLALLPLMKLQPYRDQA 794
Query: 189 RILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV- 247
+ VPN FR R ++ WAK RGIYS+ G+LGGI+ +++++V +L P+ P
Sbjct: 795 YLQRTVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPATS 854
Query: 248 ---LVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTN 304
++ FF + ++ W VM P ++ P + R + M I+T P N
Sbjct: 855 AADILCTFFNYYGNFNWKEDVMYDPSFHKKPPRY-------HRTPQEGMVILTLHAPVMN 907
Query: 305 SSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITL-------------FEPYHFFGSF 351
+ + S + R + +E +RA L E G W L F S+
Sbjct: 908 VARSASIPSTRTIVDEMKRADNLISE---GNTNWAELVGIVANTGKSSLSVSGDEFLRSY 964
Query: 352 KNYLQIHIA--AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSE 404
+Y++I++ + GW+ESR L+ + R + Q R++P F++
Sbjct: 965 NSYIKINVQYWGLSLAKGSSLVGWLESRCLVLLADLHRKFPDI-QTRIWPARFTQ 1018
>gi|296421816|ref|XP_002840460.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636676|emb|CAZ84651.1| unnamed protein product [Tuber melanosporum]
Length = 1241
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 171/371 (46%), Gaps = 35/371 (9%)
Query: 80 GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKF 139
GSY LGV G +DID LCV A + K R + LT D++VPV++
Sbjct: 688 GSYALGVHGRDSDIDCLCVSTISAKTFFEVARKRIRRFGGERGIR-LTRFVDSKVPVLEV 746
Query: 140 KFNGVSVDLLYAQL-----QFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLV 194
K + DL Y Q +S IP L DS+ +L + SLN R T+ +L +
Sbjct: 747 KVGNIKFDLQYCQSLAIIEHWSAIP--LLPPNDSVF-SLPASGLKSLNSYRDTEFLLRTI 803
Query: 195 PNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV----LVS 250
PNI FR R ++ WA G++S+ G+LGG + LL+AR+C+L +V +V
Sbjct: 804 PNINVFRLAHRFIKIWALASGVFSSRFGYLGGFHITLLLARICKLADGDPKDVTAAKIVR 863
Query: 251 RFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVS 310
FF ++ +W + +C ++ A S QR + M + + P N + N +
Sbjct: 864 LFFAYYSKTEWLTEI-ICDPEFSAGA-------SYQRFSREPMAVTSIYAPVVNVARNAT 915
Query: 311 STTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQW 370
++ + EF+ A+ + +++G+ ++ F +++Y++I + R+
Sbjct: 916 RHSVSALTREFELAE---KALDSGRWDLRSMGRENEFLAEYESYVKIDVQYW-GNTLRRG 971
Query: 371 KG---WVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGL---GR 421
K WVES + L+ + + R++P F +E + + Y +GL G
Sbjct: 972 KALTLWVESTIPLLLVGLNTKAPFIF-ARVWPQRFVSTTELDEWTELRGFYLVGLSNNGT 1030
Query: 422 KQGVSPQDGEK 432
++G S + +K
Sbjct: 1031 REGRSKEQKQK 1041
>gi|429849228|gb|ELA24631.1| duf455 domain-containing protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 1201
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 191/437 (43%), Gaps = 57/437 (13%)
Query: 13 DVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEA 72
DV + K+ ++L + +E++ R + LG L I+ + ++ + E+ +
Sbjct: 581 DVTALKQTLELL---DVVPAEKDERTRKQALGLLRMILWE-------NEQTNVEQSRGQP 630
Query: 73 NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQET--PLVEDLTPVP 130
L GSY LGV S+DID LC+G + FF L+++ V L V
Sbjct: 631 ALVLVPVGSYGLGVWSKSSDIDCLCIG---SISPRVFFTLARHRLRKSVGEGVRILRQVK 687
Query: 131 DARVPVIKFKFNGVSVDLLYAQLQ--FSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTD 188
+++ + G+ DL Y Q + P L +L QT+L L R
Sbjct: 688 AKTGTMLEIEVLGLRCDLQYCQAASVANQWPNLLKRPPSDAAFSLPTQTLLKLKPARDMY 747
Query: 189 RILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV- 247
I VP++ FR + ++ WAK GIY+ G+LGG++ ++++ RVC++ + + V
Sbjct: 748 YIARSVPDLAQFRVCYQVIKTWAKANGIYAAKFGYLGGVHLSVMLVRVCKMLLHGMGTVS 807
Query: 248 ---LVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTN 304
+++ FF +AH+ W N ++ P ++ + +H R + M ++ P N
Sbjct: 808 TADVIATFFDHYAHFDWKNDIVFDPFFHKQLRYH--------RTPREAMCLLGWHSPTLN 859
Query: 305 SSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFE-------------PYHFFGSF 351
++ S T++I+ E ++A E TW ++ F SF
Sbjct: 860 TALIASVPTVKIISTELRQANAKFTE----GATWQSILSAPGMIAEKDLSQGAASFLSSF 915
Query: 352 KNY--LQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKS 409
K + L+IH + + GW+ESR L+ I R + L R++P F + +
Sbjct: 916 KTFVNLRIHYWGGSLERGSRLVGWLESRCASLLVDINRKVPE-LAPRIWPARFVD-AATP 973
Query: 410 SSQCH-------YFMGL 419
+SQC Y +GL
Sbjct: 974 NSQCQQSEYQGSYLVGL 990
>gi|342180300|emb|CCC89777.1| putative polynucleotide adenylyltransferase [Trypanosoma congolense
IL3000]
Length = 356
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 145/315 (46%), Gaps = 33/315 (10%)
Query: 144 VSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVP-NIRNFRS 202
+SVD+++ + S P L DS L + T S+NG R T + +P + F +
Sbjct: 1 MSVDVVFISVALSQPPTSDQLLDDSFLLQVARDTRPSVNGIRFTFEVRRRLPVPHKVFAT 60
Query: 203 TLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHW--- 259
L+ ++FWA RR +Y N + G +A++VARVCQ+ P+ P+VL+ FF + W
Sbjct: 61 VLKAVKFWAMRRQVYGNIYTYPNGAVFAIMVARVCQVLPSPYPSVLLRFFFLFYTQWMSR 120
Query: 260 -KWPNPVMLCPI-----QYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTT 313
+PV L + +P W P N+ R L P+I+P+YP N + NV
Sbjct: 121 HDHISPVYLTATLESRGRIPGLPES-WKPAKNECFRD-LFPVISPAYPYVNDASNVGRCG 178
Query: 314 LRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA--KNAGD----F 367
L + E +A+ + + + L+ PY F ++L + +++ + D
Sbjct: 179 LESLYSEITQAQRVIS--ASDTLSLEKLWRPYCIMEDFAHFLLVEVSSLGDDMADAERIL 236
Query: 368 RQWKGWVESRLRQLIHMIERDMGGVLQCRLYP--------GDFSENSVKSSSQCHYFMGL 419
+W +V S+LR LI+ +ER + R +P G F + V SS ++ +G+
Sbjct: 237 GRWGSYVGSKLRFLIYSVER----FVHARPHPHKLRAKMDGTFVDRKVCCSS-IYFLIGV 291
Query: 420 GRKQGVSPQDGEKFD 434
K S FD
Sbjct: 292 RSKNSGSSLRRCMFD 306
>gi|261191320|ref|XP_002622068.1| DUF455 domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239589834|gb|EEQ72477.1| DUF455 domain-containing protein [Ajellomyces dermatitidis SLH14081]
Length = 1266
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 179/415 (43%), Gaps = 54/415 (13%)
Query: 20 LEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTM-DKGISDEEQIQEANAKLFT 78
L+ L D+ + S E++ R ++K+ I+ ++ + G E + + T
Sbjct: 628 LKVCLADKSIVPSSEDAEKRKAAFS----LLKNLIQHGSLPESGKGKEIDQPRLSIVVTT 683
Query: 79 FGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL--VEDLTPVPDARVPV 136
GSY LGV S+D+D LCVG + FF + L++ V+ L V A +
Sbjct: 684 VGSYGLGVWTDSSDVDCLCVGSISSKV---FFELTLQRLKKGAEWDVKILRKVKAATGTM 740
Query: 137 IKFKFNGVSVDLLYAQ--------LQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTD 188
++ + N V DL Y L+ +P + S L +L ++ L R
Sbjct: 741 LELEINSVKFDLQYCPAAAVAERWLEVPHLP------RSSPLFDLALLPLMKLQPYRDQA 794
Query: 189 RILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV- 247
+ VPN FR R ++ WAK RGIYS+ G+LGGI+ +++++V +L P+ P
Sbjct: 795 YLQRTVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPVTS 854
Query: 248 ---LVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTN 304
++ FF + ++ W VM P ++ P + R + M I+T P N
Sbjct: 855 AADILCTFFNYYGNFNWKEDVMYDPSFHKKPPRY-------HRTPQEGMVILTLHAPVMN 907
Query: 305 SSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITL-------------FEPYHFFGSF 351
+ + S + R + +E +RA L E G W L F S+
Sbjct: 908 VARSASIPSTRTIVDEMKRADNLISE---GNTNWAELVGIVANTGKSSLSVSGDEFLRSY 964
Query: 352 KNYLQIHIA--AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSE 404
+Y++I++ + GW+ESR L+ + R + Q R++P F++
Sbjct: 965 NSYIKINVQYWGLSLAKGSSLVGWLESRCLVLLADLHRKFPDI-QTRIWPARFTQ 1018
>gi|336471290|gb|EGO59451.1| hypothetical protein NEUTE1DRAFT_79561 [Neurospora tetrasperma FGSC
2508]
Length = 1329
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 167/391 (42%), Gaps = 45/391 (11%)
Query: 80 GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVED------LTPVPDAR 133
GS+ LGV S+DID L +GP T + R +PL L + +
Sbjct: 748 GSFALGVHTSSSDIDVLAIGPFSTTTFFSLAIQRLRRAASSPLYSQEYQPKILRRISSST 807
Query: 134 VPVIKFKFNGVSVDLLY--AQLQFSVIPEDLDSLQ-DSLLHNLDEQTVLSLNGCRVTDRI 190
+++ + DL Y A S P L + + + +L T+ L R D +
Sbjct: 808 GTMLELSLCQIKFDLQYCPAAHIASHWPRILSTAPPGNAVWSLPALTLTKLKAARDLDYL 867
Query: 191 LSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP-------NA 243
VP++ FR R +R WAK RG+Y+ G+LGGI ++++ARV +
Sbjct: 868 RRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISVMLARVYKALALGAGGVSGV 927
Query: 244 LPNVLVSRFFKIFAHWKWPNPVM---LCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
LV+ FF+ +A + W ++ +CP ++ + +R + M ++
Sbjct: 928 GVEELVASFFEEYAQFDWEKDMVYDEVCPW-FRQKREKGGEKEVYKRTGREAMVVLGWFG 986
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFE---PYHFFGSFKNYLQI 357
P N+S S ++R ++EEF+RA++L ++ ++W + F +K+Y+++
Sbjct: 987 PGLNTSGQASVWSVRTLKEEFKRARDLL--VKGEVKSWKEFLKGSGAEEFLTGYKSYVKV 1044
Query: 358 HIA--AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSS---- 411
+ ++ Q+ GW+ESR L+ + R GV R++PG F E S
Sbjct: 1045 DVQYWGLSSSKGAQFVGWLESRCVMLLVDLHRRAPGVY-VRMWPGRFVEADAASQQAEDD 1103
Query: 412 -------------QCHYFMGLGRKQGVSPQD 429
Q Y +GL S +D
Sbjct: 1104 EQTATEGTGLRDYQASYLLGLDADTTTSKED 1134
>gi|350292383|gb|EGZ73578.1| hypothetical protein NEUTE2DRAFT_108297 [Neurospora tetrasperma FGSC
2509]
Length = 1330
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 167/391 (42%), Gaps = 45/391 (11%)
Query: 80 GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVED------LTPVPDAR 133
GS+ LGV S+DID L +GP T + R +PL L + +
Sbjct: 749 GSFALGVHTSSSDIDVLAIGPFSTTTFFSLAIQRLRRAASSPLYSQEYQPKILRRISSST 808
Query: 134 VPVIKFKFNGVSVDLLY--AQLQFSVIPEDLDSLQ-DSLLHNLDEQTVLSLNGCRVTDRI 190
+++ + DL Y A S P L + + + +L T+ L R D +
Sbjct: 809 GTMLELSLCQIKFDLQYCPAAHIASHWPRILSTAPPGNAVWSLPALTLTKLKAARDLDYL 868
Query: 191 LSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP-------NA 243
VP++ FR R +R WAK RG+Y+ G+LGGI ++++ARV +
Sbjct: 869 RRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISVMLARVYKALALGAGGVSGV 928
Query: 244 LPNVLVSRFFKIFAHWKWPNPVM---LCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
LV+ FF+ +A + W ++ +CP ++ + +R + M ++
Sbjct: 929 GVEELVASFFEEYAQFDWEKDMVYDEVCPW-FRQKREKGGEKEVYKRTGREAMVVLGWFG 987
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFE---PYHFFGSFKNYLQI 357
P N+S S ++R ++EEF+RA++L ++ ++W + F +K+Y+++
Sbjct: 988 PGLNTSGQASVWSVRTLKEEFKRARDLL--VKGEVKSWKEFLKGSGAEEFLTGYKSYVKV 1045
Query: 358 HIA--AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSS---- 411
+ ++ Q+ GW+ESR L+ + R GV R++PG F E S
Sbjct: 1046 DVQYWGLSSSKGAQFVGWLESRCVMLLVDLHRRAPGVY-VRMWPGRFVEADAASQQAEDD 1104
Query: 412 -------------QCHYFMGLGRKQGVSPQD 429
Q Y +GL S +D
Sbjct: 1105 EQTATEGTGLRDYQASYLLGLDADTTTSKED 1135
>gi|294867702|ref|XP_002765194.1| hypothetical protein Pmar_PMAR025535 [Perkinsus marinus ATCC 50983]
gi|239865189|gb|EEQ97911.1| hypothetical protein Pmar_PMAR025535 [Perkinsus marinus ATCC 50983]
Length = 602
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 137/322 (42%), Gaps = 73/322 (22%)
Query: 76 LFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQET----PLVEDLTPVPD 131
L FGS + + P++DID + + + + ++ ++L E +D + + D
Sbjct: 98 LLVFGSTLMEITTPTSDIDTVVL--VSDVKRSAYMKRVQKVLTEMEPFRSYCDDFSLLAD 155
Query: 132 ARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNL------------------ 173
+ VP IK + G VD+ +A L +V+ E D++Q + +H +
Sbjct: 156 SLVPYIKCSYRGYPVDVQFAVLPSTVLKECHDAIQ-AEVHRVCTAGLLEPEGSAAADWSN 214
Query: 174 ---DEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWA 230
D+ T+ SLNG RV +L P + +R LR ++ WAK RGIYSN MG+ GG+ WA
Sbjct: 215 SLVDDATIRSLNGVRVGRYLLKRTPVLAVYRVVLRFVKMWAKARGIYSNVMGYFGGVTWA 274
Query: 231 LLVARVCQ---------LYPNALPNVLVSRFFKIFAH-WKWPNPV--------------- 265
+LV++V Q +A+ +L+ F H W NPV
Sbjct: 275 ILVSKVMQDNAELAMRETEEDAVREILLKFFDFCSTHPWGSENPVTANDEILNGFVSAGS 334
Query: 266 --MLCP-----------IQYQAMPHHVW-DPRSNQRD------RKHLMPIITPSYPCTNS 305
M P + Q P HV DP M ++TP P NS
Sbjct: 335 VEMYTPPARDIFGDDDVVDKQLAPQHVLRDPAECPYAADGVGIEGQCMVVLTPVLPTQNS 394
Query: 306 SYNVSSTTLRIMQEEFQRAKEL 327
S+N +M +EF+RA +
Sbjct: 395 SFNALDFNRYVMVQEFKRAAHM 416
>gi|46110072|ref|XP_382094.1| hypothetical protein FG01918.1 [Gibberella zeae PH-1]
Length = 1200
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 205/481 (42%), Gaps = 64/481 (13%)
Query: 20 LEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTF 79
LE L + +E+E R + + L+ +KD +D S+++ +
Sbjct: 592 LENFLENYGCLPTEQERENRAQAVRALEVALKD------VDLPASEDDTRSGPPFVVVPV 645
Query: 80 GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKF 139
GSY LGV S+DID LC+GP + FF + L+ + + V +++
Sbjct: 646 GSYGLGVWTSSSDIDCLCIGPFSSK---TFFALAVQRLKRAADIRIIRRVKANSGYMLEL 702
Query: 140 KFNGVSVDLLY--AQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNI 197
+ +G+ VDL Y A PE + + L QT+ L R + +P++
Sbjct: 703 EVHGIKVDLQYCAAASIAERWPEVMKRPANDSAFALPFQTLAKLKPVRDLFYLRRSLPDM 762
Query: 198 RNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA----LPNVLVSRFF 253
+R ++ WA+ RGIYS GFLGGI+ ++L+ +C+ + P +V FF
Sbjct: 763 VQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVPICKALASGSETVSPTDIVVTFF 822
Query: 254 KIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTT 313
+ ++++ W ++ P ++ D R N+ R+ L +I P N++ S+ T
Sbjct: 823 RHYSNFDWKTSMVFDPFFHK-------DLRYNRTFREPLC-LIGWHAPALNTAPIASNPT 874
Query: 314 LRIMQEEFQRAKELCEE--------------IEAGKRTWITLFEPYHFFGSFKNYLQI-- 357
+ + E +RA L E EAGK T F FK Y++I
Sbjct: 875 VMTIAAEIERANRLLSENGCTWNSVLGLQSAQEAGKSRGAT-----EFLKEFKTYIKIDA 929
Query: 358 HIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSS----QC 413
H + ++ GW+ESR L+ + R + ++ R++P F + S + +
Sbjct: 930 HYWGPSQEKSGRFIGWLESRCVMLLVDVNRKLQHLV-ARIWPSRFLDTSSGGAGGPGEEY 988
Query: 414 H--YFMGLGRKQGVSPQDGEK-----------FDMRLTVEE--FKSHVVWMYSSWKQGMQ 458
H Y +GL +S D ++ F+ R+ +E + + WM ++ +G
Sbjct: 989 HGCYLIGLAWDGNMSKDDVKEMRTSIQTVLQDFETRIRRDEKYYDAQSCWMSATLARGAD 1048
Query: 459 I 459
+
Sbjct: 1049 L 1049
>gi|310792019|gb|EFQ27546.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola
M1.001]
Length = 1198
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 187/432 (43%), Gaps = 51/432 (11%)
Query: 17 TKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQ-EANAK 75
T L + + + ++F +E++ R E L L +++ +D ++ +Q +
Sbjct: 584 TAALRQCMENLEVFPTEQDETTRKEALQLL--------RQILLDSDQANADQTRGRPTVM 635
Query: 76 LFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVP 135
L GSY LG ++DID LC+G + R E+ V L V
Sbjct: 636 LVPVGSYGLGTWSRTSDIDCLCIGSISPRIFFTLARQRLRKSGESG-VRLLRKVKAKTGT 694
Query: 136 VIKFKFNGVSVDLLYAQLQFSVI---PEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILS 192
+++ + G+ DL Y Q SV+ P+ L +L QT+L L R +
Sbjct: 695 MLEVEVMGIKCDLQYCQAP-SVVDQWPDMLKRPPSDPAFSLPMQTLLKLKPARDLFYLQR 753
Query: 193 LVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV----L 248
+P++ FR + + ++ WAK RGIY+ G+LGGI+ ++++ +VC++ V +
Sbjct: 754 SIPDLAQFRVSFQAIKTWAKSRGIYAAKFGYLGGIHLSVMLVKVCKMLLRVGGVVSAVDI 813
Query: 249 VSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYN 308
++ FF ++ + W N V+ P ++ + +H R + M ++ P N++
Sbjct: 814 ITTFFDHYSRFDWQNDVVFDPFFHKNLRYH--------RTPREAMCLLGWHSPTLNTALI 865
Query: 309 VSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLF-------------EPYHFFGSFKNY- 354
S T++I+ E A ++ +W +L F GS++++
Sbjct: 866 ASVPTVKIISAELCHA---ATQLSGDGASWQSLLSIPDSSQDRNMTPSASKFLGSYRSFV 922
Query: 355 -LQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSE------NSV 407
L+IH + + GW+ESR L+ I R + L R++P F + +
Sbjct: 923 NLRIHYWGASLERGSRLVGWLESRCASLLVDINRRVPE-LSARIWPARFVDSLTPEADET 981
Query: 408 KSSSQCHYFMGL 419
+ Q Y +GL
Sbjct: 982 RGDYQGSYLIGL 993
>gi|402083981|gb|EJT78999.1| hypothetical protein GGTG_04090 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1263
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 155/356 (43%), Gaps = 47/356 (13%)
Query: 78 TFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARV--- 134
+ GSY LGV PS+DID +C+GP + F L V R
Sbjct: 677 SVGSYGLGVWTPSSDIDVMCIGPYSSA----VFMALAVQRIRKAGARGFKLVRRVRANTG 732
Query: 135 PVIKFKFNGVSVDLLY--AQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILS 192
+++ + GV +DL Y A P LD + +L QT+ L R D +
Sbjct: 733 TMLELEVQGVKMDLQYCAATSVAEGWPAVLDRPASDPVFSLPAQTLGKLKAARDLDYLRR 792
Query: 193 LVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQ-LYPNALPNVLVS- 250
+P++ FR R +R WA+ RGIYS G+LGGI ++L+ARVC+ L +A P + V+
Sbjct: 793 SLPDLAKFRLAHRAVRTWARTRGIYSVRFGYLGGIQISVLLARVCKSLARDAGPGLSVAD 852
Query: 251 ---RFFKIFAHWKWPNPVMLCPIQY-QAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSS 306
FF +A + W + P + + + +H R + + I+ P N+S
Sbjct: 853 ILVTFFHHYAAFDWQQNLAFDPFFHNKKLSYH--------RTFREPLAILGFFPPMLNTS 904
Query: 307 YNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFE------------------PYHFF 348
+ + ++R M EF+RA L + TW F F
Sbjct: 905 HAATIPSVRAMAGEFRRAAALLASEDV---TWDAFFRGGGPTTVPGPLSATLPSGAADFL 961
Query: 349 GSFKNYLQIHIAAKNAGDFR--QWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF 402
S+K+++++ ++ R Q+ GW ESR ++ + R + VL R++P F
Sbjct: 962 ASYKSFVKLELSYWGISLPRGAQFVGWFESRCPLILVDVSRRLPNVL-ARMWPERF 1016
>gi|408391246|gb|EKJ70626.1| hypothetical protein FPSE_09136 [Fusarium pseudograminearum CS3096]
Length = 1200
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 115/490 (23%), Positives = 208/490 (42%), Gaps = 64/490 (13%)
Query: 11 VLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQ 70
V ++ + LE L + +E+E R + + L+ +KD +D S+++
Sbjct: 583 VPSLVEGEGLEHFLENYGCLPTEQERANRAQAVRALEVALKD------VDLSASEDDARS 636
Query: 71 EANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVP 130
+ GSY LGV S+DID LC+GP + FF + L+ + + V
Sbjct: 637 GPPFVVVPVGSYGLGVWTSSSDIDCLCIGPFSSK---TFFALAVQRLKRAADIRIIRRVK 693
Query: 131 DARVPVIKFKFNGVSVDLLY--AQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTD 188
+++ + +G+ VDL Y A PE + + L QT+ L R
Sbjct: 694 ANSGYMLELEVHGIKVDLQYCAAASIAERWPEVMKRPANDSAFALPFQTLAKLKPVRDLF 753
Query: 189 RILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNA----L 244
+ +P++ +R ++ WA+ RGIYS GFLGGI+ ++L+ +C+ +
Sbjct: 754 YLRRSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVPICKALASGSEIVS 813
Query: 245 PNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTN 304
P +V FF+ ++++ W ++ P ++ D R N+ R+ L +I P N
Sbjct: 814 PTDIVVTFFRHYSNFDWKTSMVFDPFFHK-------DLRYNRTFREPLC-LIGWHAPALN 865
Query: 305 SSYNVSSTTLRIMQEEFQRAKELCEEI--------------EAGKRTWITLFEPYHFFGS 350
++ S+ T+ + E +RA L E EAGK T F
Sbjct: 866 TAPIASNPTVMAIAAEIERANRLLSEDGCTWNSVLGLQSAQEAGKSRGAT-----EFLKE 920
Query: 351 FKNYLQI--HIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGD----FSE 404
FK Y++I H + ++ GW+ESR L+ + R + ++ R++P FS
Sbjct: 921 FKTYVKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDVNRKLQHLV-ARIWPSRFIDVFSG 979
Query: 405 NSVKSSSQCH--YFMGLGRKQGVSPQDGEK-----------FDMRLTVEE--FKSHVVWM 449
+ + H Y +GL +S D ++ F+ R+ +E + + WM
Sbjct: 980 GAGGPGEEYHGCYLIGLAWDGNMSKDDVKEMRTSIQTVLQDFETRIRRDEKYYDAQSCWM 1039
Query: 450 YSSWKQGMQI 459
++ +G +
Sbjct: 1040 SATLARGSDL 1049
>gi|403371755|gb|EJY85762.1| hypothetical protein OXYTRI_16252 [Oxytricha trifallax]
Length = 771
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 153/337 (45%), Gaps = 59/337 (17%)
Query: 69 IQEANAKLFTFGSYRLGVAGPSTDIDALCVGP-------CYAT---RHDDFFGKLFRMLQ 118
+ E + + +GS L +D D + V C + R F KL L
Sbjct: 345 LNECDYLILQYGSSFLMAETQESDYDLILVNKLNDLQQTCENSDLIRQQFLFEKLAEQLN 404
Query: 119 ETPLVEDLT--PVPDARVPVIKFKF-NGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDE 175
+++L + A+VP++K K+ +++DL A + + S+Q+ LL D
Sbjct: 405 MNFTIKNLEIFKIKHAKVPILKMKYKQQINIDLSLAIVCNTEEKLSQISIQNYLL--FDN 462
Query: 176 QTVLSLNGCRVTDRILSLVP----NIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWAL 231
Q+ +S+N + I +LV N F L+ ++ WA+RR +Y G+LGGI +A+
Sbjct: 463 QSEVSINAVIQSQEIKNLVAGCNVNFELFGLCLQHVKTWAQRRKVYGQQYGYLGGIAFAI 522
Query: 232 LVARVCQLYPN--------ALPNV--------LVSRFFKIFAHWKWPNPVML-------- 267
L A + Q Y N PN+ + +FFK ++ W+WPNP++L
Sbjct: 523 LCANIVQAYQNDDKFMCYLNDPNIKHKQKLKYFLLKFFKFYSSWEWPNPIILDQGFYDQE 582
Query: 268 -----CPIQYQAMPHHVWDPRSNQRDRKHLMPIITP--------SYPCTNSSYNVSSTTL 314
Q + +W+P S D +HLMPII+P + TN++ V ++ L
Sbjct: 583 NLLNPNGQQVKMNVKKIWNPISCIGDSQHLMPIISPQIKINTQKTITSTNTADQVLNSNL 642
Query: 315 RIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSF 351
+I EF+RA ++ ++I GK I L E F SF
Sbjct: 643 QIYLYEFKRAYKIMKKIYKGK---IKLKELGSAFESF 676
>gi|330926264|ref|XP_003301394.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
gi|311323960|gb|EFQ90506.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
Length = 1230
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 164/373 (43%), Gaps = 58/373 (15%)
Query: 80 GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFR---MLQETPLVEDLTPVPDARVPV 136
GSY LGV +DID LC+G T F KL R + + V L V + +
Sbjct: 667 GSYALGVWTSDSDIDCLCIG----TISSKTFFKLARQRIIRSDNRGVRVLRKVEASTGTM 722
Query: 137 IKFKFNGVSVDLLYAQL--------QFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTD 188
++ NGV +DL Y +F IP + NL ++ L R
Sbjct: 723 LELSVNGVLMDLQYCPAIQVVERWSEFRNIP------ASDPMFNLSLLSLRKLKPYRDLL 776
Query: 189 RILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP----NAL 244
I +P+ +FR RC++ WA +RG+YS GFLGG++ L+++ VC+ +A
Sbjct: 777 YIQRTLPSPSSFRLAYRCIKLWAVQRGLYSAKFGFLGGVHITLMLSWVCKRLAYDSGSAS 836
Query: 245 PNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTN 304
LV+ FF + + W N ++ Y H PR N+ R+ P++ + N
Sbjct: 837 AADLVASFFHHYGQFDWTNDMV-----YDVF-FHKKRPRYNRSTRE---PMVVLGFHTPN 887
Query: 305 SSYNVSSTT--LRIMQEEFQRA-KELCEEIEAGKRTWITLFEP--------------YHF 347
S+ +ST L+I+ +EF+ A K LCE TW F P F
Sbjct: 888 SNIAHTSTMPGLQILVKEFKAADKRLCEP----GMTWDAFFGPGSTLSPVSSPSLGAAGF 943
Query: 348 FGSFKNYLQIHIA--AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSEN 405
+++N++++ I + + GWVESR LI I + + + R++PG F++N
Sbjct: 944 LETYQNFVKVDIQFWGRTLTKGKSLVGWVESRCISLIVEIHKALPKS-EVRIWPGRFTDN 1002
Query: 406 SVKSSSQCHYFMG 418
+ Q + G
Sbjct: 1003 ETNVADQSKDYHG 1015
>gi|351712642|gb|EHB15561.1| Poly(A) polymerase gamma [Heterocephalus glaber]
Length = 528
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 83/144 (57%), Gaps = 2/144 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + P +D I T++L + +F EEE R+ VLG+L+ +VK+WI V+ K +
Sbjct: 75 ISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNL 134
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
+ K+FTFGSYRLGV DIDALCV P + R DFF F L+ +
Sbjct: 135 P-PSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKHQDGI 192
Query: 124 EDLTPVPDARVPVIKFKFNGVSVD 147
+L V DA VPVIKF+F+G+ V+
Sbjct: 193 RNLRAVEDAFVPVIKFEFDGIEVN 216
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 285 NQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQR 323
N DR HLMPIITP+YP NS+YNVS++T +M EEF++
Sbjct: 216 NPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQ 254
>gi|164429482|ref|XP_001728545.1| hypothetical protein NCU11050 [Neurospora crassa OR74A]
gi|157073494|gb|EDO65454.1| predicted protein [Neurospora crassa OR74A]
Length = 1368
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 166/391 (42%), Gaps = 45/391 (11%)
Query: 80 GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVED------LTPVPDAR 133
GS+ LGV S+DID L +GP T + R +PL L + +
Sbjct: 787 GSFALGVHTSSSDIDVLAIGPFSTTTFFSLAIQRLRRASSSPLYSQEHQPKILRRISSST 846
Query: 134 VPVIKFKFNGVSVDLLY--AQLQFSVIPEDLDSLQ-DSLLHNLDEQTVLSLNGCRVTDRI 190
+++ + DL Y A S P L + + + +L T+ L R D +
Sbjct: 847 GTMLELSLCQIKFDLQYCPAAHIASHWPRILSTAPPGNAVWSLPALTLTKLKAARDLDYL 906
Query: 191 LSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP-------NA 243
VP++ FR R +R WAK RG+Y+ G+LGGI ++++ARV +
Sbjct: 907 RRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISVMLARVYKALALGAGGVSGV 966
Query: 244 LPNVLVSRFFKIFAHWKWPNPVM---LCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
LV+ FF+ +A + W ++ +CP + + +R + M ++
Sbjct: 967 GVEELVASFFEEYAQFDWEKDMVYDEVCPW-LRLKREKGGEKEVYRRTGREAMVVLGWFG 1025
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFE---PYHFFGSFKNYLQI 357
P N+S S ++R +++EF+RA++L ++ ++W + F +K+Y+++
Sbjct: 1026 PGLNTSGQASVWSVRTLKDEFKRARDLL--VKGEVKSWKEFLKGSGAEEFLTGYKSYVKV 1083
Query: 358 HIA--AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSS---- 411
+ ++ Q+ GW+ESR L+ + R GV R++PG F E S
Sbjct: 1084 DVQYWGLSSSKGAQFVGWLESRCVMLLVDLHRRAPGVY-VRMWPGRFVEADTASQQAEND 1142
Query: 412 -------------QCHYFMGLGRKQGVSPQD 429
Q Y +GL S +D
Sbjct: 1143 EQTATEGTGPRDYQASYLLGLDADTTTSKED 1173
>gi|7108953|gb|AAF36552.1|AF201910_1 polyA polymerase [Trypanosoma cruzi]
Length = 304
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 101/191 (52%), Gaps = 5/191 (2%)
Query: 70 QEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPV 129
+E + + FGS LG + +D+D + + + FF + +LQ P+V ++ V
Sbjct: 62 EERWVRAYPFGSCGLGASVADSDLDIVLFC-SFKVTAEVFFREFPPLLQ--PVVGNVVLV 118
Query: 130 PDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDR 189
P ARVPV+KF ++G SVD+++ + P L DS L + T S+NG R
Sbjct: 119 P-ARVPVVKFSYSGTSVDVVFVSAALAAPPTTEQLLDDSFLLQVARDTRHSVNGLRTVLE 177
Query: 190 ILSLVPNIRN-FRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVL 248
+ +P + F + L+ ++ WA RR +Y N + G+ A++VAR+CQ+ P + PNVL
Sbjct: 178 VKRRLPVAYDVFTTVLKSVKLWAMRRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVL 237
Query: 249 VSRFFKIFAHW 259
+ FF + W
Sbjct: 238 LRFFFLFYTQW 248
>gi|261265299|gb|ACX55867.1| polyA polymerase [Bubalus bubalis]
Length = 83
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 60/83 (72%)
Query: 223 FLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDP 282
FLGG++WA+LVAR CQLYPNA+ + LV +FF + W+WPNPV+L + + VWDP
Sbjct: 1 FLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVSPKWEWPNPVLLKQPEECNLNLPVWDP 60
Query: 283 RSNQRDRKHLMPIITPSYPCTNS 305
R N DR HLMPIITP+YP NS
Sbjct: 61 RVNPSDRYHLMPIITPAYPQQNS 83
>gi|452004284|gb|EMD96740.1| hypothetical protein COCHEDRAFT_1220308 [Cochliobolus heterostrophus
C5]
Length = 1226
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 201/459 (43%), Gaps = 74/459 (16%)
Query: 1 MEIISTSAPTV------LDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWI 54
M+ S++ P+V + + ++ L + ++E++ R E L IV D
Sbjct: 590 MDTDSSNLPSVQLKRAIATLTDSSDMSSALEVHGMIPNDEQTTQRQEAFALLQRIVSD-- 647
Query: 55 KRVTMDKGISDEEQIQEANAKLFTF--GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGK 112
S++ + ++ L GSY LGV S+DID LC+G + F K
Sbjct: 648 --------TSEDAETGQSGIPLVIVPVGSYALGVWTSSSDIDCLCIGSISSKT----FFK 695
Query: 113 LFR---MLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLY---AQL-----QFSVIPED 161
L R + P V L V A +++ NG+ +DL Y AQ+ + + IP
Sbjct: 696 LARQRLVKAGNPQVRILRKVEAATGTMLELSINGILMDLQYCPAAQVVERWSELAEIPAS 755
Query: 162 LDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAM 221
+ NL ++ L R + +P+ FR R ++ WA +RG+Y+
Sbjct: 756 ------DPIFNLSMLSLRKLKPYRDLLYLQRTIPSRSIFRQAYRLIKLWAVQRGLYAAKF 809
Query: 222 GFLGGINWALLVARVCQLYPNALPNV----LVSRFFKIFAHWKWPNPVMLCPIQYQAMPH 277
G+LGG++ L+++ VC+ + + +V +V FF+ +A++ W N ++ Y A
Sbjct: 810 GYLGGMHITLMLSWVCKSLAHNVGSVSIADIVVSFFQHYANFDWSNDMV-----YDAF-F 863
Query: 278 HVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTT--LRIMQEEFQRAKELCEEIEAGK 335
H PR N+ R+ P++ S+ NS++ ST L+ + +E + A E
Sbjct: 864 HKKKPRYNRSARE---PMVILSFHAPNSNFAQKSTVPGLQTLIKELKAADMKLSE---PG 917
Query: 336 RTWITLFE-----------PY---HFFGSFKNYLQIHIA--AKNAGDFRQWKGWVESRLR 379
TW F PY F ++ ++++I I + + GWVESR
Sbjct: 918 MTWQKFFSTSSDLASEPRLPYGAVEFLNTYNDFVKIDIQFWGRMLAKGKSLVGWVESRCI 977
Query: 380 QLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMG 418
++ I + + G + R++P F++++ S+ + F G
Sbjct: 978 SIVVDIHKALPGS-EVRVWPALFTDDAPNDSTDSNDFQG 1015
>gi|295664162|ref|XP_002792633.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278747|gb|EEH34313.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1260
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 191/442 (43%), Gaps = 65/442 (14%)
Query: 19 ELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFT 78
+L+ L D +F S E++ R + +K + + + + E F+
Sbjct: 628 DLKLFLADRSIFPSPEDAEKRKAAF--------ECLKHLIQHGSLPESGETHETERSNFS 679
Query: 79 F-----GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDAR 133
F GSY LGV S+D+D LCVGP + + + R ++ V+ L V A
Sbjct: 680 FIVTAVGSYGLGVWTNSSDVDCLCVGPVSSRTFFELAMQRLRKGADSG-VKILRKVKAAT 738
Query: 134 VPVIKFKFNGVSVDLLYAQ--------LQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCR 185
+ + + GV DL Y L+ S +P + L +L +++ L R
Sbjct: 739 GTMWELEVRGVKFDLQYCPAGAVAERWLEVSHLP------RADPLFDLAYLSLVKLQPHR 792
Query: 186 VTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALP 245
+ + N FR R ++ WAK RGIYS+ G+LGGI+ L+++R+ +L P
Sbjct: 793 DQTYLQRTIQNPAMFRLLHRVIKAWAKSRGIYSSRFGYLGGIHITLMLSRLLKLLPPNTA 852
Query: 246 NV--LVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+V ++ FF +A + W ++ I ++ P + PR M I+T YP
Sbjct: 853 SVADILRTFFNHYADFYWMEGMVYDMIFHRKQPRYNRSPREG-------MVILTLHYPIM 905
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLF-------EPY------HFFGS 350
N + S +++R + +E RA L E G+ W +L +P F S
Sbjct: 906 NVARTASISSMRTIVDEMDRADTLISE---GRLRWTSLVGITPQAGQPTLSNSADEFLKS 962
Query: 351 FKNYLQIHIA--AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVK 408
+ +Y++I++ + GW+ESR L+ I R + LQ R++P F++N
Sbjct: 963 YNSYIKINVQYWGLSLAKGSSLIGWLESRCLFLLADIHRKLPD-LQTRIWPARFTQNEDN 1021
Query: 409 SSS---------QCHYFMGLGR 421
+ + Q Y +GL +
Sbjct: 1022 NENTPTQEEHEYQGCYLIGLAK 1043
>gi|189194681|ref|XP_001933679.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979243|gb|EDU45869.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1151
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 174/405 (42%), Gaps = 64/405 (15%)
Query: 66 EEQIQ-EANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFR---MLQETP 121
E+ IQ E + GSY LGV +DID LC+G T F KL R + +
Sbjct: 573 EDSIQPEIPFVMVPVGSYALGVWTSDSDIDCLCIG----TISSKTFFKLARQRIIKSDNR 628
Query: 122 LVEDLTPVPDARVPVIKFKFNGVSVDLLYAQL--------QFSVIPEDLDSLQDSLLHNL 173
V L V + +++ NGV +DL Y +F IP + NL
Sbjct: 629 GVRILRKVEASTGTMLELSVNGVLMDLQYCPATQVVERWSEFRNIP------ASDPIFNL 682
Query: 174 DEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLV 233
++ L R I +P++ +FR RC++ WA +RG+YS GFLGG++ L++
Sbjct: 683 SLLSLRKLKPYRDLLYIQRTLPSLSSFRLAYRCIKLWAVQRGLYSAKFGFLGGVHITLML 742
Query: 234 ARVCQLYP----NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDR 289
+ +C+ +A LV+ FF + + W N ++ Y H PR N+ R
Sbjct: 743 SWICKRLAYDSGSASAADLVTSFFHHYGQFDWTNEMV-----YDVF-FHKKRPRYNRSAR 796
Query: 290 KHLMPIITPSYPCTNSSYNVSSTT--LRIMQEEFQRAKE-LCEEIEAGKRTWITLF---- 342
+ P++ + NS+ +ST L+ + +EF+ A E LCE+ TW F
Sbjct: 797 E---PMVVLGFHAPNSNIAHTSTVPGLQTLVKEFKAAGERLCEQ----GMTWDAFFGLGP 849
Query: 343 ----------EPYHFFGSFKNYLQIHIA--AKNAGDFRQWKGWVESRLRQLIHMIERDMG 390
F ++ N++++ I + + GWVESR LI I + +
Sbjct: 850 TLSSVSSPSLGAAGFLETYHNFVKVDIQFWGRTLTKGKSLVGWVESRCISLIVEIHKTLP 909
Query: 391 GVLQCRLYPGDFSENSVKSSSQCH-----YFMGLGRKQGVSPQDG 430
+ R++PG F+ N ++ + Y +GL + + D
Sbjct: 910 NS-EVRIWPGRFTNNETSAADESRDYHGCYLIGLSKATNFTSVDA 953
>gi|302882405|ref|XP_003040113.1| hypothetical protein NECHADRAFT_50338 [Nectria haematococca mpVI
77-13-4]
gi|256720980|gb|EEU34400.1| hypothetical protein NECHADRAFT_50338 [Nectria haematococca mpVI
77-13-4]
Length = 1208
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 182/403 (45%), Gaps = 47/403 (11%)
Query: 76 LFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE--TPLVEDLTPVPDAR 133
L GSY LGV S+DID LC+G + FF + L+ T + L V
Sbjct: 644 LVPVGSYGLGVWTSSSDIDCLCIG---SISPKIFFALAVQRLRRAVTGGIRILRRVKANS 700
Query: 134 VPVIKFKFNGVSVDLLY--AQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRIL 191
+++ + +G+ +DL Y A PE + L QT+ L R +
Sbjct: 701 GYMLELEVHGIKMDLQYCAAASIAERWPEVMKRPASDPAFALPFQTLAKLKPVRDLFYLR 760
Query: 192 SLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV---- 247
+P++ +R ++ WA+ RGIYS GFLGGI+ ++L+A +C++ N V
Sbjct: 761 RSIPDMVQYRMAHLFIKAWAQSRGIYSAKFGFLGGIHISVLLAPLCKMLANDGATVSTAD 820
Query: 248 LVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSY 307
++ FF+ +A + W ++ P ++ D R N+ R+ L ++ P N++
Sbjct: 821 IIFTFFQHYARFSWKTALVFDPFFHK-------DLRYNRTFREPLC-LLGWHAPALNTAV 872
Query: 308 NVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLF--EP------------YHFFGSFKN 353
N S T+ + EF+RA+ L + +W L EP F ++K+
Sbjct: 873 NASVPTVDAIAAEFERAERL---LSVENFSWSNLLGVEPDSPPSSLSGPGATEFLQNYKS 929
Query: 354 YLQI--HIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSE--NSVK- 408
Y++I H + ++ GW+ESR L+ ++R + + R++P F + +SV+
Sbjct: 930 YIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDLDRKVKNI-HARIWPARFLDMASSVEG 988
Query: 409 --SSSQCHYFMGLGRKQGVSPQDGEK---FDMRLTVEEFKSHV 446
+ HY +GL R +D K ++ ++EF++ +
Sbjct: 989 PGTEYHGHYLIGLSRNGEEPNKDDAKATQVALQAALQEFEARI 1031
>gi|380475493|emb|CCF45225.1| endonuclease/Exonuclease/phosphatase [Colletotrichum higginsianum]
Length = 1195
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 193/439 (43%), Gaps = 49/439 (11%)
Query: 8 APTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEE 67
AP L ++ L + + + +F +E+ R E L L + D D+ D+
Sbjct: 574 APAGLSDVAV--LRRCMENLNIFPTEQNEAVRKEALQLLQHTLLD------SDQTTGDQT 625
Query: 68 QIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQET--PLVED 125
+ + A L GSY LG ++DID LC+G FF + L+++ P V
Sbjct: 626 RGRPA-IMLVPVGSYGLGTWSRTSDIDCLCIGSISPRV---FFILARQRLRKSGNPGVRL 681
Query: 126 LTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVI---PEDLDSLQDSLLHNLDEQTVLSLN 182
L V +++ + GV DL Y Q SV+ P+ L +L QT+L L
Sbjct: 682 LRKVKAKTGTMLEVEILGVKCDLQYCQAP-SVVEQWPDMLKRPPSDPAFSLPMQTLLKLK 740
Query: 183 GCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN 242
R + VP++ FR + + ++ WAK RGIY+ G+LGGI+ ++++ +VC++ +
Sbjct: 741 PARDLFYLQRSVPDLAQFRMSFQAIKTWAKARGIYAAKFGYLGGIHLSVMLVKVCKMLLH 800
Query: 243 ALPNV----LVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITP 298
V +++ FF ++ W ++ P ++ + +H R + M ++
Sbjct: 801 DGGVVSTADIITTFFDHYSQLDWQRDMVFDPFFHKNLKYH--------RTPREAMCLLGW 852
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYH----------FF 348
P N++ S T +I+ E +A ++ +++ + H F
Sbjct: 853 HSPTLNTALTASVPTTKIISAELCQATTQLSRDGTSWQSLLSIPDSSHSKNMTPGASNFL 912
Query: 349 GSFKNY--LQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENS 406
GSF+++ L++H + + GW+ESR L+ + + + L R++P F ++S
Sbjct: 913 GSFRSFINLRVHYWGASLERGSRLVGWLESRCASLLVDVNKRVPE-LSARIWPARFVDSS 971
Query: 407 ------VKSSSQCHYFMGL 419
+ Q Y +GL
Sbjct: 972 SSEAKGTQGDYQGSYLVGL 990
>gi|211909028|gb|ACJ12807.1| poly(A) polymerase alpha [Bubalus bubalis]
Length = 108
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 68/108 (62%)
Query: 279 VWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTW 338
VWDPR N DR HLMPIITP+YP NS+YNVS +T +M EEF++ + +EI K W
Sbjct: 1 VWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEW 60
Query: 339 ITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIE 386
LFE +FF +K+Y+ + +A +W G VES++R L+ +E
Sbjct: 61 SKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLE 108
>gi|402581474|gb|EJW75422.1| hypothetical protein WUBG_13666 [Wuchereria bancrofti]
Length = 351
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 154/323 (47%), Gaps = 43/323 (13%)
Query: 260 KWPNPVMLCPIQY---QAMP---HHVWDPRSNQRDRK------HLMPIITPSYPCTNSSY 307
+WP+PV+L + + MP VWDPRS DR+ HLMPI+TP++P NS++
Sbjct: 36 EWPHPVVLKETEVSHARDMPSLQELVWDPRSRSGDRESPSRRFHLMPIVTPAFPQQNSTF 95
Query: 308 NVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDF 367
NV+ ++L+I+ E + +I GK W LFE +FF +K++L + + D
Sbjct: 96 NVTKSSLKIIMNEIEEGLVTINDIMKGKAGWSALFEEVNFFSRYKHFLALLCLSATEQDE 155
Query: 368 RQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENS----VKSSSQ---CH-YFMGL 419
W G VES++R LI +ER + C ++ + + V+ S Q C +F+GL
Sbjct: 156 LVWCGLVESKIRFLIASLERR-ESIRVCHVHTKYYQPRNDPFPVQVSLQNPRCRLWFIGL 214
Query: 420 GRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFV--- 473
+ VS K D++ V+ F + M ++ + +GM + +LR ++ ++
Sbjct: 215 DLNKTVS----RKIDIQHEVQSFMDLLNSMATTQNIYVEGMSVIPHYLRKAELVKWLKME 270
Query: 474 -FPGGVRPPKSLNEKKRKRIEVIESTKL-----KKSESSTAGHSSGQKSSQTESGVALDG 527
G + P KR+RI ++ + K+ S T+ +S S +L G
Sbjct: 271 DLTRGKKAP------KRRRIATSQNQQATGPSQNKARSETSSIASCNSSGAASPSTSLSG 324
Query: 528 SHGLKSGPSVEPSTSSVSSSTSA 550
+ K+ + +S+VS T A
Sbjct: 325 TEVSKNVQNDLAMSSTVSVPTGA 347
>gi|325090905|gb|EGC44215.1| DUF455 domain-containing protein [Ajellomyces capsulatus H88]
Length = 1256
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 177/408 (43%), Gaps = 63/408 (15%)
Query: 54 IKRVTMDKGISDEEQIQEANAKLF-----TFGSYRLGVAGPSTDIDALCVGPCYATRHDD 108
+K + D +S+ +E F T GS LGV S+DID LCVG A +
Sbjct: 656 LKHIIQDGSLSEPSNGEEIGRSKFSIVVTTVGSSGLGVWTESSDIDCLCVGSISA---NV 712
Query: 109 FFGKLFRMLQE--TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQ--------LQFSVI 158
FF + + L+ V+ + V A +++ + NG+ DL Y L+ +
Sbjct: 713 FFELIIQRLRNRIDLGVKIIRRVKPAFGTMLELEVNGIKFDLQYCPAAAVAERWLEVPNL 772
Query: 159 PEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYS 218
P Q S L NL + L R + + N FR R ++ WAK RGIYS
Sbjct: 773 P------QSSPLFNLSLIPRMKLQPYRDQAYLQRTIQNPATFRLLHRIIKGWAKYRGIYS 826
Query: 219 NAMGFLGGINWALLVARVCQLY---PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAM 275
+ G+LGGI+ L+++R+ +L P + ++L + FF + ++ W + PI ++
Sbjct: 827 SRFGYLGGIHITLMLSRLLKLLPPNPGSAADILCT-FFNHYGNFNWEKDAVYDPIFHEKP 885
Query: 276 PHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGK 335
P + PR M I T P N + + S ++R + +E +RA+ L E G
Sbjct: 886 PRNYRPPREG-------MIIFTLHTPIINVARSTSIPSMRKIVDEMKRAENLISE---GN 935
Query: 336 RTWITLFEPY-------------HFFGSFKNYLQIHIA--AKNAGDFRQWKGWVESRLRQ 380
W L Y F S+ +Y++I++ + + GWVESR
Sbjct: 936 ANWAELLGIYPKTGKSALSSSADEFLKSYNSYIKINVQYWSLSLAKGSSLVGWVESRCLD 995
Query: 381 LIHMIERDMGGVLQCRLYPGDFSENSVKSSS---------QCHYFMGL 419
L+ + R+ + Q R++P F++N +S Q Y +GL
Sbjct: 996 LLDDLYREFPDI-QARIWPARFTQNEDHENSTPAQEEHEYQGCYLIGL 1042
>gi|240274573|gb|EER38089.1| DUF455 domain-containing protein [Ajellomyces capsulatus H143]
Length = 1256
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 176/410 (42%), Gaps = 67/410 (16%)
Query: 54 IKRVTMDKGISDEEQIQEANAKLF-----TFGSYRLGVAGPSTDIDALCVGPCYATRHDD 108
+K + D +S+ +E F T GS LGV S+DID LCVG A +
Sbjct: 656 LKHIIQDGSLSEPSNGEEIGRSKFSIVVTTVGSSGLGVWTESSDIDCLCVGSISA---NV 712
Query: 109 FFGKLFRMLQE--TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQ--------LQFSVI 158
FF + + L+ V+ + V A +++ + NG+ DL Y L+ +
Sbjct: 713 FFELIIQRLRNRIDLGVKIIRRVKPAFGTMLELEVNGIKFDLQYCPAAAVAERWLEVPNL 772
Query: 159 PEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYS 218
P Q S L NL + L R + + N FR R ++ WAK RGIYS
Sbjct: 773 P------QSSPLFNLSLIPRMKLQPYRDQAYLQRTIQNPATFRLLHRIIKGWAKYRGIYS 826
Query: 219 NAMGFLGGINWALLVARVCQLYPNALPNV-----LVSRFFKIFAHWKWPNPVMLCPIQYQ 273
+ G+LGGI+ L+++R+ +L P PN ++ FF + ++ W + PI ++
Sbjct: 827 SRFGYLGGIHITLMLSRLLKLLP---PNPGSAADILCTFFNHYGNFNWEKDAVYDPIFHE 883
Query: 274 AMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEA 333
P + PR M I T P N + + S ++R + +E +RA+ L E
Sbjct: 884 KPPRNYRPPREG-------MIIFTLHTPIINVARSTSIPSMRKIVDEMKRAENLISE--- 933
Query: 334 GKRTWITLFEPY-------------HFFGSFKNYLQIHIA--AKNAGDFRQWKGWVESRL 378
G W L Y F S+ +Y++I++ + + GWVESR
Sbjct: 934 GNANWAELLGIYPKTGKSALSSSADEFLKSYNSYIKINVQYWSLSLAKGSSLVGWVESRC 993
Query: 379 RQLIHMIERDMGGVLQCRLYPGDFSENSVKSSS---------QCHYFMGL 419
L+ + R+ + Q R++P F++N +S Q Y +GL
Sbjct: 994 LDLLDDLYREFPDI-QARIWPARFTQNEDHENSTPAQEKHEYQGCYLIGL 1042
>gi|226295206|gb|EEH50626.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 1228
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 188/433 (43%), Gaps = 66/433 (15%)
Query: 13 DVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEA 72
D +L+ L D +F S E++ R ++K + + + + + E
Sbjct: 622 DFHDPADLKLCLADRSIFPSPEDAEKRKAAF--------KYLKHLILHGSLPESGETHET 673
Query: 73 NAKLFTF-----GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLT 127
F+F GSY LGV S+D+D LCVGP +T + + R ++ V+ L
Sbjct: 674 GRSNFSFIVTAVGSYGLGVWTNSSDVDCLCVGPVSSTTFFELAMQRLRKGADSG-VKILR 732
Query: 128 PVPDARVPVIKFKFNGVSVDLLYAQ--------LQFSVIPEDLDSLQDSLLHNLDEQTVL 179
V A + + + NGV DL Y L+ S +P + L +L +++
Sbjct: 733 KVKAATGTMWELEVNGVKFDLQYCPAGAVAERWLEVSHLP------RADPLFDLAYLSLV 786
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
L R + + N FR R ++ WAK RGIYS+ G+LGGI+ L+++R+ +L
Sbjct: 787 KLQPYRDQTYLQRTIKNPAMFRLLHRVIKAWAKSRGIYSSRFGYLGGIHITLMLSRLLKL 846
Query: 240 YPNALPNV--LVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIIT 297
P +V ++ FF +A + W ++ M H PR N+ R+ M I+T
Sbjct: 847 LPPNTTSVADILRTFFNHYADFYWMEGMVY------DMNFHRKQPRYNRSPRE-CMVILT 899
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQI 357
YP N + S +++R + +E RA L E G+ I + Y +
Sbjct: 900 LHYPIMNVARTASISSMRTIVDEMNRADTLISE---GRYIKINV-----------QYWGL 945
Query: 358 HIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSS------ 411
+A ++ GW+ESR L+ I R + LQ R++P F++N + +
Sbjct: 946 SLAKGSS-----LIGWLESRCLLLLADIHRKLPD-LQTRIWPARFTQNEDNNKNTPTQEE 999
Query: 412 ---QCHYFMGLGR 421
Q Y +GL +
Sbjct: 1000 REYQGCYLIGLAK 1012
>gi|296820870|ref|XP_002850004.1| DUF455 domain-containing protein [Arthroderma otae CBS 113480]
gi|238837558|gb|EEQ27220.1| DUF455 domain-containing protein [Arthroderma otae CBS 113480]
Length = 1204
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 188/426 (44%), Gaps = 86/426 (20%)
Query: 67 EQIQEANAK-------LFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE 119
E I ++N + L GSY LG GP++DID LC+GP + FF + L++
Sbjct: 633 EPIHDSNGRDIETPLVLIPVGSYGLGTWGPNSDIDCLCIGPISTST---FFSLAIQRLKK 689
Query: 120 TPL--VEDLTPVPDARVPVIKFKFNGVSVDLLYA---------QLQFSVIPEDLDSLQDS 168
+ + V A +++ + + +DL Y Q + P D
Sbjct: 690 ASAHGIRIMRKVKAATGMMLELQAGNIKLDLQYCPAANIAKRWQEATKIPPHDP------ 743
Query: 169 LLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGIN 228
+ +L ++ L R + I +VP++ F+ RC+ WAK G+YS+ G LGGI+
Sbjct: 744 -IFDLSIYSLSKLQPFRDQEYIKRMVPDMYVFQLAHRCITLWAKTSGVYSSKFGLLGGIH 802
Query: 229 WALLVARVCQLYPNALPNV----LVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRS 284
++++R+ QL + V L++ FF +A++ W N V+ P RS
Sbjct: 803 ITMMLSRLHQLLHEDIGRVTVPELLTMFFHHYANFDWKNKVVDSP-----------GTRS 851
Query: 285 N-QRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFE 343
+R + M I+T P N + V++++LR + F+R +EL E A ++
Sbjct: 852 KYRRLLREPMVILTVHIPTINVARAVTASSLRTIISAFKRVEELLAEDGARWSNVLSDTS 911
Query: 344 PYH--------FFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGG---V 392
H F ++ +Y+++++ Q+ G ++ L+ D+G
Sbjct: 912 ISHNNQTGAEKFLVAYNSYIKVNV---------QYWGASSTQASSLL-----DLGKQVPS 957
Query: 393 LQCRLYPGDFSENSVKSSSQCH---------YFMGLGRKQG-----VSPQDGEKFDMRLT 438
+ R++P F+ S+ + + H Y +GL R QG S +DG++ ++ T
Sbjct: 958 VHGRIWPARFT--SIDAPNDGHTAETEYVGCYLIGLERLQGSLSSTASKEDGKRA-LQAT 1014
Query: 439 VEEFKS 444
+ +F +
Sbjct: 1015 LSQFTA 1020
>gi|451855249|gb|EMD68541.1| hypothetical protein COCSADRAFT_178345 [Cochliobolus sativus ND90Pr]
Length = 1226
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 108/458 (23%), Positives = 199/458 (43%), Gaps = 72/458 (15%)
Query: 1 MEIISTSAPTV------LDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWI 54
M+ S++ P+V ++ + ++ L + ++E++ R E L IV D
Sbjct: 590 MDTDSSNQPSVQLKRAIATLMDSSDMSSALEVHGMIPNDEQTTQRQEAFELLQRIVSD-- 647
Query: 55 KRVTMDKGISDEEQIQEANAKLFT-FGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKL 113
D + +Q + GSY LGV S+DID LC+G + F KL
Sbjct: 648 -------TSEDADTVQPGIPLVIVPVGSYALGVWTSSSDIDCLCIGSISSKT----FFKL 696
Query: 114 FR---MLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLY---AQL-----QFSVIPEDL 162
R + P V L V +++ NG+ +D+ Y AQ+ +F+ IP
Sbjct: 697 ARQRLVKAGNPQVRILRKVEATTGTMLELSVNGILMDMQYCPAAQVVERWSEFADIPAS- 755
Query: 163 DSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMG 222
+ NL ++ L R + +P+ FR R ++ W +RG+Y+ G
Sbjct: 756 -----DPIFNLSMLSLRKLKPYRDLLYLQRTIPSRSLFRQAYRLIKLWGVQRGLYAAKFG 810
Query: 223 FLGGINWALLVARVCQLYPNALPNV----LVSRFFKIFAHWKWPNPVMLCPIQYQAMPHH 278
+LGG++ L+++ VC+ + + +V +V FF+ +A++ W N ++ Y A H
Sbjct: 811 YLGGMHITLMLSWVCKSLAHDVGSVNVADIVVSFFQHYANFDWSNDMV-----YDAF-FH 864
Query: 279 VWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTT--LRIMQEEFQRAKELCEEIEAGKR 336
PR N+ R+ P++ S+ NS++ ST L+++ +EF+ A E
Sbjct: 865 KKKPRYNRSTRE---PMVILSFHAPNSNFAQKSTVPGLQMLIKEFKAADMKLSE---PGM 918
Query: 337 TWITLFEP--------------YHFFGSFKNYLQIHIA--AKNAGDFRQWKGWVESRLRQ 380
TW F F ++ ++++I I + + GWVESR
Sbjct: 919 TWQKFFSTSSDLALKPCLPSGVVEFLNAYSDFVKIDIQFWGRMLAKGKGLVGWVESRCIS 978
Query: 381 LIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMG 418
++ I + + G + R++P F++++ S+ + F G
Sbjct: 979 IVVDIHKALPGS-EVRVWPALFTDDAPNDSTDSNDFQG 1015
>gi|396483666|ref|XP_003841760.1| similar to DUF455 domain-containing protein [Leptosphaeria maculans
JN3]
gi|312218335|emb|CBX98281.1| similar to DUF455 domain-containing protein [Leptosphaeria maculans
JN3]
Length = 1224
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 200/460 (43%), Gaps = 68/460 (14%)
Query: 1 MEIISTSAPTVL-DVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTM 59
M++ A T L D IS L+ +L + + +E++ R + L +V T+
Sbjct: 590 MKVEHKEAATALSDPIS---LQSMLYRQDMIPTEKQMEVRQQAFELLKNVVLG-----TI 641
Query: 60 DKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRML-- 117
DK + + + GSY LGV +D+D LCVG + F KL R
Sbjct: 642 DK---QDHASSGVSLNMVAVGSYALGVWTADSDLDCLCVGSVSSKT----FFKLVRQRLA 694
Query: 118 -QETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYA-QLQFSVIPEDLDSLQDS-LLHNLD 174
++ L V +++ +G+S DL Y + + + L S + NL
Sbjct: 695 RARNRGIKILRKVEAKTGTMLELSVDGISADLHYCPAARIAERWSEFHGLSASDPIFNLP 754
Query: 175 EQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVA 234
++ L R I +P++ FR+ RC++ WA +RGIYS+ G+L G + L++
Sbjct: 755 ALSLRKLKSYRDFLYIQRTLPSLSAFRTAFRCIKLWAVQRGIYSSKFGYLSGTHITLMLT 814
Query: 235 RVC-----QLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDR 289
+C Q P+++VS FF +A++ W N ++ +++ P + R
Sbjct: 815 WICKKLRYQSGSVGPPDMVVS-FFSYYANFDWTNELLFDAFFHESRPRY-------HRSA 866
Query: 290 KHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLF-EPYHFF 348
+ M I+ P +N ++ ++ L+I+ EF+ A ++ + + TW F +P
Sbjct: 867 REPMVILGYHAPHSNIAHTSTTPGLQILMNEFRAAADV---LSSPGITWAKFFGDP---- 919
Query: 349 GSFKNYLQIHIAAKNAG-----------DFRQWK----------GWVESRLRQLIHMIER 387
S K+ +Q+H++ + + W GW+ESR L+ I +
Sbjct: 920 SSLKDSVQLHLSQMTEHFLATQHSFVTVEMQYWGRTLAKGKGLVGWIESRCLSLVVDIHK 979
Query: 388 DMGGVLQCRLYPGDFSEN--SVKSSSQCH--YFMGLGRKQ 423
M L+ R++P F+ + +K + H Y +GL R +
Sbjct: 980 -MLPELEVRIWPTRFTNDKADLKELKEYHGCYLIGLTRSE 1018
>gi|384498736|gb|EIE89227.1| hypothetical protein RO3G_13938 [Rhizopus delemar RA 99-880]
Length = 281
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 140/298 (46%), Gaps = 43/298 (14%)
Query: 45 RLDGIVKDWIKRVTMDKGI----SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGP 100
R D I D +G+ ++++ Q+ L FGS+ LG + ++ V P
Sbjct: 5 RRDNITNDHWYNYLQTQGVIVSETEKQTRQDIECILSPFGSFGLGGYIKNDVVELALVCP 64
Query: 101 CYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPE 160
Y DFF +L+E L+ N + V++ + +L+ +
Sbjct: 65 -YQIHRSDFFKFFPELLKEQSLI------------------NNIEVNISFIRLKLERVTH 105
Query: 161 DLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVP--NIRNFRSTLRCLRFWAKRRGIYS 218
++ L +SLL ++D+ ++ +++G R+ S + N+R F+ +L+C+++WA +RG+Y+
Sbjct: 106 RINFLDNSLLQDMDDASLATMDGPRLNQFNKSQIKPSNVRLFQVSLQCIKYWAIQRGLYN 165
Query: 219 NAMGFLGGINWALLVARV---CQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAM 275
+G+L LL+ + Q +++ FF++++ W W PV+L
Sbjct: 166 AEIGYLNETACTLLLIKTFMFIQSKEKLSITIILQNFFQMWSKWPWKTPVILT------- 218
Query: 276 PHHVWDPRSNQRD-------RKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKE 326
+H+ D N+ + +K +MPII+P YP + + V+ T + +Q EF+R
Sbjct: 219 -NHIPDKNGNKLEYSSITGSQKAMMPIISPCYPVYSVTPYVTKLTQKTIQLEFERGNH 275
>gi|119620436|gb|EAX00031.1| poly(A) polymerase gamma, isoform CRA_c [Homo sapiens]
Length = 425
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 153/312 (49%), Gaps = 26/312 (8%)
Query: 293 MPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFK 352
MPIITP+YP NS+YNVS++T +M EEF++ + +EI GK W L EP +FF ++
Sbjct: 1 MPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYR 60
Query: 353 NYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKS 409
+Y+ + +A + +W G VES++R L+ +ER+ L + +PG+ E+ +
Sbjct: 61 HYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDN 119
Query: 410 SSQCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRC 466
+ +F+G+ ++ V + D+ ++ F V ++ K+GM+I +H++
Sbjct: 120 NYVSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKK 178
Query: 467 QDIPDFVFPGGVRPPKSLNEKKRKRI-EVIESTKLKKSESSTAGHSSGQKSSQTESGVAL 525
+ + ++ P + L +KK++ + +V S+ +S+ + S S T++G
Sbjct: 179 KQLHHYL------PAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSRDTDNGTPF 232
Query: 526 DGSHGLKSGPSVEPSTSSVSSSTSASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVA 585
+ P++ S S S + R ++ E + +Q + +GA V
Sbjct: 233 NS-----------PASKSDSPSVGETERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVD 281
Query: 586 AALATGTISSFC 597
+ + T + + C
Sbjct: 282 STVKTVSPPTVC 293
>gi|239612757|gb|EEQ89744.1| DUF455 domain-containing protein [Ajellomyces dermatitidis ER-3]
Length = 1266
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 179/415 (43%), Gaps = 54/415 (13%)
Query: 20 LEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTM-DKGISDEEQIQEANAKLFT 78
L+ L D+ + S E++ R ++K+ I+ ++ + G E + + T
Sbjct: 628 LKVCLADKSIVPSSEDAEKRKAAFS----LLKNLIQHGSLPESGKGKEIDQPRLSIVVTT 683
Query: 79 FGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL--VEDLTPVPDARVPV 136
GSY LGV S+D+D LCVG + FF + L++ V+ L V A +
Sbjct: 684 VGSYGLGVWTDSSDVDCLCVGSISSKV---FFELTLQRLKKGAEWDVKILRKVKAATGTM 740
Query: 137 IKFKFNGVSVDLLYAQ--------LQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTD 188
++ + N V DL Y L+ +P + S L +L ++ L R
Sbjct: 741 LELEINSVKFDLQYCPAAAVAERWLEVPHLP------RSSPLFDLALLPLMKLQPYRDQA 794
Query: 189 RILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV- 247
+ VPN FR R ++ WAK RGIYS+ G+LGGI+ +++++V +L P+ P
Sbjct: 795 YLQRTVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPAPS 854
Query: 248 ---LVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTN 304
++ FF + ++ W VM P ++ P + R + M I+T P N
Sbjct: 855 AADILCTFFNYYGNFNWKEGVMYDPSFHKKPPLY-------HRTPQEGMVILTLHAPVMN 907
Query: 305 SSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITL-------------FEPYHFFGSF 351
+ + S + R + +E +RA L E G W L F S+
Sbjct: 908 VARSASIPSTRTIVDEMKRADNLISE---GNTNWAELVGIVANTGKSSLSVSGDEFLRSY 964
Query: 352 KNYLQIHIA--AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSE 404
+Y++I++ + GW+ESR L+ + R + Q R++P F++
Sbjct: 965 NSYIKINVQYWGLSLAKGSSLVGWLESRCLVLLADLHRKFPDI-QTRIWPARFTQ 1018
>gi|115448957|ref|NP_001048258.1| Os02g0771500 [Oryza sativa Japonica Group]
gi|113537789|dbj|BAF10172.1| Os02g0771500, partial [Oryza sativa Japonica Group]
Length = 91
Score = 98.6 bits (244), Expect = 9e-18, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 49/64 (76%)
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
+G RV D IL LVP+ FR+ LRC++ WAK RG+YSN GFLGGI WA+LVARVCQLYP
Sbjct: 9 HGIRVADEILRLVPDTAAFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARVCQLYP 68
Query: 242 NALP 245
N P
Sbjct: 69 NTSP 72
>gi|355709241|gb|AES03526.1| poly polymerase alpha [Mustela putorius furo]
Length = 358
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 111/227 (48%), Gaps = 18/227 (7%)
Query: 285 NQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEP 344
N DR HLMPIITP+YP NS+YNVS +T +M EEF++ + +EI K W LFE
Sbjct: 2 NPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEA 61
Query: 345 YHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF-- 402
+FF +K+Y+ + +A +W G VES++R L+ +E++ L + P F
Sbjct: 62 PNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPA 120
Query: 403 -SENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---G 456
EN K + + +GL K+ ++ E + LT ++ F V + K
Sbjct: 121 PKENPDKEEFRTMWVIGLVFKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVD 177
Query: 457 MQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIESTKLKKS 503
M+I H++ + + + P L +KK+ E + T L S
Sbjct: 178 MKIAAMHVKRKQLHQLL------PSHVLQKKKKHSTEGVRLTPLNDS 218
>gi|110740407|dbj|BAF02098.1| poly(A) polymerase like protein [Arabidopsis thaliana]
Length = 348
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Query: 376 SRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEKFDM 435
SR RQL IERD G+L C P ++ + + + C +FMGL R +GV Q+ ++FD+
Sbjct: 1 SRFRQLTLKIERDTNGMLMCHPQPNEYVD-TARQFLHCAFFMGLQRAEGVGGQECQQFDI 59
Query: 436 RLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPK 482
R TV+EF+ V MY WK GM + VSH+R + +P FVFP G R P+
Sbjct: 60 RGTVDEFRQEV-NMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPR 105
>gi|119186269|ref|XP_001243741.1| hypothetical protein CIMG_03182 [Coccidioides immitis RS]
Length = 1172
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 22/287 (7%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
I +S T ++ +L+ L + + ++E+ R VL L ++ + G
Sbjct: 608 IPSSLATPANLSDKHDLDLCLREHSMVPTKEDISKRTAVLDLLRNVIIHGSAARVDENGH 667
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL- 122
S+ E + L GSY LGV PS+D+D L +GP + K+F + E L
Sbjct: 668 SNNEP--DIAMVLVPVGSYGLGVWSPSSDVDCLSIGPISS--------KIFFAIAEQRLR 717
Query: 123 ------VEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQ--DSLLHNLD 174
+ L V A +I+ + NG+ DL Y V SL D + +L
Sbjct: 718 RAADSGIRILRKVKAATGTMIELEVNGIKCDLQYCPAARVVEGWQRISLSPPDDPIFDLS 777
Query: 175 EQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVA 234
Q + L R D I +P++ FR+ R + WAK RG+Y + G+LGGI+ ++++
Sbjct: 778 YQALTKLQAFRDLDYIRRSIPDLAAFRTAHRFITAWAKHRGVYLSRFGYLGGIHITMMLS 837
Query: 235 RVCQLYPNAL---PNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHH 278
RV +L+ + ++ RFF+ +A + W + + P +++ P +
Sbjct: 838 RVFKLFCGEVRVTSTDMIYRFFQYYADFDWEHKTVFDPFFFESTPRY 884
>gi|349805727|gb|AEQ18336.1| putative poly polymerase alpha [Hymenochirus curtipes]
Length = 183
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 60/80 (75%), Gaps = 5/80 (6%)
Query: 174 DEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLV 233
D + + SLNGCRVTD IL LVPN NFRSTLR ++ WAKRRGIYS LGG +WA+LV
Sbjct: 1 DIRCIRSLNGCRVTDEILHLVPN--NFRSTLRAIKLWAKRRGIYS-TFRILGG-SWAMLV 56
Query: 234 ARVCQLYPNALPNVLVSRFF 253
AR CQLY NA+ + LV +F+
Sbjct: 57 ARTCQLY-NAIASTLVHKFY 75
>gi|407849942|gb|EKG04508.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 285
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 36/256 (14%)
Query: 213 RRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHW----KWPNPVMLC 268
RR +Y N + G+ A++VAR+CQ+ P + PNVL+ FF + W +PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYIT 61
Query: 269 PI-----QYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQR 323
+ +P WDPR + R L+P+I P+YP N + NV +L + E
Sbjct: 62 TSLESRGRIPGLPDS-WDPRRDA-CRDDLLPVINPAYPYVNDARNVGRCSLEVFYAELTY 119
Query: 324 AKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA------KNAGDFRQWKGWVESR 377
A L +E T++EPYH + + +H+ K W +V S+
Sbjct: 120 AYRLLSNLETPLE---TIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSK 176
Query: 378 LRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMG-----LGRKQGVS---PQD 429
LR L++ +ER ++ R YP ++ +S + F+ +G K+ V PQ
Sbjct: 177 LRILLYALER----LVDARPYPQKLNDGPPRSVPKSGRFLKGSCFIVGIKEKVGRRFPQK 232
Query: 430 G---EKFD-MRLTVEE 441
E FD +R TV E
Sbjct: 233 NLFFEAFDELRYTVLE 248
>gi|443916802|gb|ELU37750.1| polymerase [Rhizoctonia solani AG-1 IA]
Length = 508
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 91/186 (48%), Gaps = 48/186 (25%)
Query: 247 VLVSRFFK----IFAHWKWPNPVMLCPIQYQA--------MPHHVWDPRSNQRDRKHLMP 294
+++++F K A KWP P++L I+ + M VW+PR DR HLMP
Sbjct: 60 IVLAKFSKRTNGYLAFRKWPQPILLQQIEEEVKELDFSKRMNFRVWNPRVC--DRNHLMP 117
Query: 295 IITPSYPCTNSSYNVSSTTLRIMQEEFQRAK------------------ELCEEIEAGKR 336
IITPSYP S++NV+ +T+ +M++EF R K ++ E+I +
Sbjct: 118 IITPSYPSMCSTHNVTRSTMSVMKDEFMRGKFSYLLLCTDDTNNKRPGSQIVEQIMFRRA 177
Query: 337 TWITLFEPYHFFGSFKNYLQIHIAAKNAGD--------FRQW--------KGWVESRLRQ 380
W LF + FF ++ YLQI ++ A D FR W G VESRLRQ
Sbjct: 178 EWSELFAKHDFFQKYRYYLQIIASSGKAEDQLKWYVSPFRAWVVSEAASRSGTVESRLRQ 237
Query: 381 LIHMIE 386
L+ +E
Sbjct: 238 LVMKLE 243
>gi|340521883|gb|EGR52117.1| predicted protein [Trichoderma reesei QM6a]
Length = 1224
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 179/423 (42%), Gaps = 51/423 (12%)
Query: 16 STKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAK 75
S +EL+ LV F + ++ R E + L + D G S Q+Q
Sbjct: 606 SFEELKGCLVSSGQFPASSDAELRNEAISLLKTTLLD---SDAESAGNSTRSQVQLV--- 659
Query: 76 LFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL--VEDLTPVPDAR 133
+ GS+ LGV S+D+D LCVG + FF + L++ ++ L V
Sbjct: 660 VIPVGSFGLGVWTSSSDVDCLCVGNISSRT---FFALAIQKLRKASANGIKILRRVKANS 716
Query: 134 VPVIKFKFNGVSVDLLY--AQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRIL 191
+++ + G+ DL Y A PE + L Q++ L R +
Sbjct: 717 GTMLELEIRGIKFDLQYCSAAAIAQGYPEVFKRPSSDPIFALPLQSLAKLKPARDLFYLR 776
Query: 192 SLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN-----ALPN 246
+P++ +R ++ WAK RG+Y+ G LGGI+ ++ VC+ N + +
Sbjct: 777 RSIPDMTKYRVAHLVIKAWAKSRGLYAAKFGLLGGIHITSMLVPVCKALANEPEAASTAD 836
Query: 247 VLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSS 306
VL S FF ++ + W V+ P + + +H R + + ++ P N++
Sbjct: 837 VLTS-FFHHYSTFDWATGVVYDPFYHTELRYH--------RTFREPLCLLGWHGPSLNTA 887
Query: 307 YNVSSTTLRIMQEEFQRAKELCEEIEAGKRTW------------ITLFE--PYHFFGSFK 352
+ S +T+ + EF RA L + TW +L E F S++
Sbjct: 888 SSASISTVNALASEFTRAATLLSQ---EGMTWSKFLGVEQSESPSSLLEKGAADFLDSYR 944
Query: 353 NYLQIHIAAKNAGDF----RQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVK 408
Y I I+A+ G R++ GW+ESRL ++ I R G++ R++P F++
Sbjct: 945 TY--IKISARYWGSSQQKGRKYLGWLESRLISILVDISRKSPGIVP-RIWPARFTDEEQS 1001
Query: 409 SSS 411
SS+
Sbjct: 1002 SSN 1004
>gi|358389108|gb|EHK26701.1| hypothetical protein TRIVIDRAFT_59177 [Trichoderma virens Gv29-8]
Length = 1215
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 110/476 (23%), Positives = 199/476 (41%), Gaps = 63/476 (13%)
Query: 10 TVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQI 69
L + S EL+ LV F + ++ R E + L + + D ++ E+
Sbjct: 591 AALTLGSFDELKDSLVSNGQFPTASDAELRQEAIALLQRTL------LENDTTAAEAEKR 644
Query: 70 QEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE--TPLVEDLT 127
L GS+ LGV +DID LCVG + FF + L++ T ++ L
Sbjct: 645 SHVQLVLIPVGSFGLGVWTSLSDIDCLCVGNISSK---TFFSLAVQKLKKASTSGIKILR 701
Query: 128 PVPDARVPVIKFKFNGVSVDLLY--AQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCR 185
V +++ + +G+ DL Y A P+ L + +L Q++ L R
Sbjct: 702 RVMANTGTMLELEIHGIRFDLQYCAAAAIAQGYPDVLKRPASDPVFSLPVQSIAKLKPAR 761
Query: 186 VTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN--- 242
+ +P++ +R ++ WA+ RG+YS G LGGI+ L+ VC+ N
Sbjct: 762 DLVYLRRSIPDMTKYRVAHLFIKAWAQSRGLYSAKFGLLGGIHITSLLVPVCKALANEPE 821
Query: 243 -ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYP 301
A +++ FF ++ + W V+ P ++ + +H R + + ++ P
Sbjct: 822 AASTADILTSFFYHYSTFDWETGVVFDPFYHRDLKYH--------RTFREPLCLLGWHGP 873
Query: 302 CTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTW------------ITLFE--PYHF 347
N++ + S +T+ + E RA L + TW +L E F
Sbjct: 874 SLNTASSASISTVNALASELTRAAALLSQ---DGMTWSKFLGLELSGTPSSLIEKGAADF 930
Query: 348 FGSFKNYLQIHIAAKNAGDF----RQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFS 403
S++ Y I I+A+ G R++ GW+ESR ++ I R G++ R++P F
Sbjct: 931 LDSYQTY--IKISARYWGSSQQKGRKYLGWLESRFISILVDISRKTLGLVP-RIWPARFI 987
Query: 404 ENSVKSS--------SQCHYFMGLG-----RKQGVSPQDGEKFDMRLTVEEFKSHV 446
+ S S C Y +GL + + Q + ++R+ ++EF+S V
Sbjct: 988 DEDQTSGTSDENSELSAC-YLIGLKWVDSIADKSATSQAAAEGNIRVILQEFESRV 1042
>gi|414888166|tpg|DAA64180.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888167|tpg|DAA64181.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 265
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 11/167 (6%)
Query: 221 MGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVW 280
+GF GI+ A+L A VC+ +P+A + L + FF+ FAHW W PV L H
Sbjct: 11 LGFFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSL---------HD-- 59
Query: 281 DPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWIT 340
+ + LMPI+ P P + V+ +L+ ++EE R L + W
Sbjct: 60 ELTTCLHSEGRLMPIVMPCTPPEFCASTVTKGSLKKIREELTRGYVLTRDPLRHDFQWSW 119
Query: 341 LFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIER 387
LFEP+ + ++ +L+I + A + W GWV+SR R LI +ER
Sbjct: 120 LFEPFPYDQKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLER 166
>gi|71409419|ref|XP_807056.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70870970|gb|EAN85205.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 285
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 115/256 (44%), Gaps = 36/256 (14%)
Query: 213 RRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHW----KWPNPVMLC 268
RR +Y N + G+ A++VAR+CQ+ P + PNVL+ FF + W +PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYIT 61
Query: 269 PI-----QYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQR 323
+ +P WDPR + R L+P+I P+YP N + NV L + E
Sbjct: 62 TSLESRGRIPGLPDS-WDPRRDA-CRDDLLPVINPAYPYVNDARNVGRCGLEVFYAELTY 119
Query: 324 AKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA------KNAGDFRQWKGWVESR 377
A L +E T++EPYH + + +H+ K W +V S+
Sbjct: 120 AYRLLSNLETPLE---TIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSK 176
Query: 378 LRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMG-----LGRKQGVS---PQD 429
LR L++ +ER ++ R YP ++ +S + F+ +G K+ V PQ
Sbjct: 177 LRILLYALER----IVDARPYPQKLNDVPPRSVPKPGRFLKGSCFIVGIKEKVGRRFPQK 232
Query: 430 G---EKFD-MRLTVEE 441
E FD +R TV E
Sbjct: 233 NMFFEAFDELRYTVLE 248
>gi|400596352|gb|EJP64126.1| endonuclease/Exonuclease/phosphatase protein [Beauveria bassiana
ARSEF 2860]
Length = 1233
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 158/384 (41%), Gaps = 50/384 (13%)
Query: 76 LFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRM-LQETPLVED-----LTPV 129
L GSY LGV S +D LC+G + FRM LQ D L
Sbjct: 658 LVPVGSYGLGVWTSSDHVDCLCIGTMSSK-------TFFRMALQRLRKASDGGMRILRKA 710
Query: 130 PDARVPVIKFKFNGVSVDLLYAQLQFSV--IPEDLDSLQDSLLHNLDEQTVLSLNGCRVT 187
+ ++K + G+ L Y V P ++ D L QT+ L R
Sbjct: 711 STSTGTMLKLQILGIKFTLHYCAATSIVEKYPRVMNLPSDHPEFALPVQTLAKLKPARDL 770
Query: 188 DRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVC-QLYPNALP- 245
+L +P++ FR ++ WA RGIY G L GI+ +L+ +C QL ++
Sbjct: 771 YYLLRSIPDLAKFRVAFLFIKAWASSRGIYGARFGLLSGIHITVLLVPICKQLAAISMAV 830
Query: 246 --NVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCT 303
+++ FF +A +W V+L P ++ + +H R + ++ P
Sbjct: 831 STTDILTTFFSHYADLEWETHVVLDPFYHRELRYH--------RTSREPFCLLGWHAPAL 882
Query: 304 NSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPY--------HFFGSFKNYL 355
N++ S+ T++ + E +A L + A TW T+ P F +FK+Y+
Sbjct: 883 NTAMAASTPTVKSIAAELSKANSLLSQPGA---TWGTILGPASTAASGVRDFLQNFKSYV 939
Query: 356 QI--HIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF-----SENSVK 408
+I + R++ W+ESR ++ + R +L RL+PG F ++
Sbjct: 940 KIDARFWGPSPSSGRKFLSWLESRCVAVLADMTRKAPSLLP-RLWPGRFIDRPNTDTVTG 998
Query: 409 SSSQCHYFMGLGRKQGVSPQDGEK 432
S C Y +GL +DG++
Sbjct: 999 SEYHCFYLIGLAWNS----EDGDR 1018
>gi|76154117|gb|AAX25625.2| SJCHGC06256 protein [Schistosoma japonicum]
Length = 166
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S PT D+ T+ELE L +F ++EE R E L RL I WI++ +++ +
Sbjct: 27 LSFKKPTEQDLKDTQELEASLAQLNIFETQEEISQRREALVRLQEISNGWIRQKALEQNL 86
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
K+FTFGSYRLGV DID+L V P + TR ++FF +L E P V
Sbjct: 87 PTH-VANSTTGKIFTFGSYRLGVNFRGADIDSLLVVPRFITR-EEFFSDFQTVLAENPNV 144
Query: 124 EDLTPVPDARVPVIKFKFN 142
EDL V DA VPV+K KF+
Sbjct: 145 EDLHAVVDAFVPVLKMKFH 163
>gi|340501019|gb|EGR27841.1| poly polymerase, putative [Ichthyophthirius multifiliis]
Length = 306
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 120/265 (45%), Gaps = 24/265 (9%)
Query: 173 LDEQTVLSLNGCRVTDRILSLV------PNIRN--FRSTLRCLRFWAKRRGIYSNAMGFL 224
+D++ + S+NG R IL V P I F+ L+ ++ WA+ GIY N +GFL
Sbjct: 1 MDQKDIKSINGFRSNQAILEYVSEKNPNPEIAKSRFKDALKVIKIWARHNGIYDNRLGFL 60
Query: 225 GGINWALLVARVCQLYPNALPNVLVSRFFKIFA-HWKWPNPVMLCPIQYQAMPHHVWDPR 283
GI+ A+++A++ QL+PN N ++ +FF+ FA W W + + + M +
Sbjct: 61 SGISLAIMLAKILQLFPNLEVNGIIKQFFQTFASRWDWKKMDVQLGSRSEEMKVQM---- 116
Query: 284 SNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFE 343
Q ++ M IITP+YP N++ V I+ + + + + W + E
Sbjct: 117 --QSQQRKCMHIITPAYPEYNTTDRVKMINFNIIVAKLIASNDYIQ--NQKNIVWEKIVE 172
Query: 344 PYHFFGSFKNYLQIHIAAKNAGDFRQW---KGWVESRLRQLIHM---IERDMGGVLQCRL 397
+F +K +++I + G+ Q+ K + RL L IE D + + R
Sbjct: 173 KENFINHYKLFIEIDLIQNKKGEIGQFIAQKKYFALRLLNLFDQLKGIEYDPEKI-EVRP 231
Query: 398 YPGDFSENSVKSSSQCHYFMGLGRK 422
+P F + + +GL K
Sbjct: 232 WPIFFDKKDPDYPYCAAFLIGLKNK 256
>gi|367045862|ref|XP_003653311.1| hypothetical protein THITE_2047808 [Thielavia terrestris NRRL 8126]
gi|347000573|gb|AEO66975.1| hypothetical protein THITE_2047808 [Thielavia terrestris NRRL 8126]
Length = 1221
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 156/351 (44%), Gaps = 43/351 (12%)
Query: 80 GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL--VEDLTPVPDARVPVI 137
GSY L V S+DID LC+GP ++T +FF + L++ + L V ++
Sbjct: 652 GSYALDVWTSSSDIDVLCIGP-FSTH--NFFALASQRLRKAAGQGIRILRRVRANTGTML 708
Query: 138 KFKFNGVSVDLLY--AQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVP 195
+ + +G+ +DL Y A P L + + +L QT+ L R D I VP
Sbjct: 709 EIEVDGIKMDLQYCPATSVAERWPHVLQTPASDPVWSLSAQTLSKLKAVRDVDYIRRSVP 768
Query: 196 NIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY-----PNALPNVLVS 250
++ FR R ++ WAK RGIYS GFL GI ++L+ARV +L P ++ ++L +
Sbjct: 769 DLAAFRLAHRFIKTWAKSRGIYSARFGFLSGIQISILLARVQKLLARESGPCSVEDLLAT 828
Query: 251 RFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY--PCTNSSYN 308
FF +A + W P+ ++ + PR P+ Y P N++
Sbjct: 829 -FFTHYAAFDWSARPAFDPLFHRHRLPYTRTPRE---------PLAVLGYFPPSLNTAAA 878
Query: 309 VSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPY---------------HFFGSFKN 353
S +++ + EF+RA + + + +P+ F + ++
Sbjct: 879 ASVPSVKTLAAEFRRAGAAFLSSSSSSSS-SSSSDPHPARSWSSLAAPSAASDFLAAHRS 937
Query: 354 YLQIHIAAKNAGDFR--QWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF 402
Y+++ + R Q GW+ESR L+ + R G L R++PG F
Sbjct: 938 YVRLDVQYWGLPRARGAQLLGWLESRCAALLVDLHRRAPG-LHARMWPGRF 987
>gi|83774635|dbj|BAE64758.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 457
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 123/265 (46%), Gaps = 43/265 (16%)
Query: 194 VPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV----LV 249
+P++ +FR R ++ WA+RRGIYS+ +G+LGGI+ LL+AR+C L + ++
Sbjct: 8 IPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAADII 67
Query: 250 SRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNV 309
+ FFK +A + W V+ P Y++ P + R ++ + I++ P N +
Sbjct: 68 TTFFKHYAQFNWEKQVVYDPSFYKSPPRYF-------RPQREPLVILSQHQPKVNVARAA 120
Query: 310 SSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPY-------HFFGSFKNYLQIHIA-- 360
S + R + +EFQRA +L + + TW L F S+++Y ++++
Sbjct: 121 SIPSTRTLVQEFQRADKLLSQQDV---TWEQLAGSIENSTGADEFLKSYRSYAKVNVQYW 177
Query: 361 AKNAGDFRQWKGWVESRLRQLI-----------HMIERDMGGVLQCRLYPGDFSE----- 404
A R GW+E R L+ I R + R++P F++
Sbjct: 178 GGAATKGRMLVGWLEWRCVSLLVGRLHPLPTFQRHIHRKFPDI-HARIWPARFTDMEEVG 236
Query: 405 NSVKSSSQCHYFMGLGRKQ--GVSP 427
+ K C Y +GL R+ G +P
Sbjct: 237 ETTKEYQGC-YLIGLTRESTPGATP 260
>gi|407922599|gb|EKG15696.1| Endonuclease/exonuclease/phosphatase [Macrophomina phaseolina MS6]
Length = 1142
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 143/319 (44%), Gaps = 22/319 (6%)
Query: 136 VIKFKFNGVSVDLLY-AQLQFS-VIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSL 193
+++ G+ +DL Y A Q + P L L +L QT+ L R + +
Sbjct: 645 MLELNIQGIRLDLQYCAAAQIAGCWPAPLSLPPTDPLFSLPLQTLSKLKAIRDLAHLQNT 704
Query: 194 VPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV----LV 249
P++ F+ R L WA+ RGIY+ G+L G + +L++ R+ +L ++ +V LV
Sbjct: 705 TPDLPAFQMAYRLLVVWARSRGIYAARFGYLSGTHISLMLDRIAKLLYHSNRDVTAADLV 764
Query: 250 SRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNV 309
FF+ +A + W + P+ +A+P R QR M ++ P N +
Sbjct: 765 CAFFRYYAEFDWSKNTVEDPLA-RAIPGM---GRPYQRHASEPMVVLGYHIPRVNIARAA 820
Query: 310 SSTTLRIMQEEFQRAKELC-EEIEAGKR-TWITLF-----EPYHFFGSFKNYLQIHIA-- 360
+ + ++ EE QRA L ++ E G TW + F ++++Y+++ +
Sbjct: 821 TVPAVGVLTEELQRAHALVTKQPEQGSTPTWAEIIGEERNSAAEFLSAYRSYIRVDVQYW 880
Query: 361 AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCH--YFMG 418
++ RQ GWVESR L+ + R + + R++P F+ + H Y +G
Sbjct: 881 GTSSVKGRQLIGWVESRCPTLLIDLNRKIPEI-HARMWPLRFARGASNEKGDQHGCYLVG 939
Query: 419 LGRKQGVSPQDGEKFDMRL 437
L ++Q + D +L
Sbjct: 940 LAKRQDSDSDSKTEADRKL 958
>gi|358396858|gb|EHK46233.1| hypothetical protein TRIATDRAFT_89627 [Trichoderma atroviride IMI
206040]
Length = 1209
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 194/463 (41%), Gaps = 60/463 (12%)
Query: 18 KELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLF 77
+EL+ LV F + E+ R E + L I+ + D + E + L
Sbjct: 595 EELKASLVSSGQFPTTAEANLRKEAIDLLQRIL------IEEDATAAVAETRSKVQLVLI 648
Query: 78 TFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL--VEDLTPVPDARVP 135
GS+ LGV +DID LCVG +TR FF + L++ V+ L V
Sbjct: 649 PVGSFGLGVWTDLSDIDCLCVGNI-STRV--FFNLAVQKLRKASAEGVKILRRVMANTGT 705
Query: 136 VIKFKFNGVSVDLLY--AQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSL 193
+++ + G+ DL Y A P+ L + L QT+ L R +
Sbjct: 706 MLELEIRGIKFDLQYCAAAAIAQGYPDVLKRPSSDPVFALPLQTLAKLKPARDLFYLRRS 765
Query: 194 VPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNV----LV 249
+P++ +R ++ WA+ RG+Y+ G LGGI+ + ++ +C+ N V ++
Sbjct: 766 IPDMTKYRVAHLFIKAWAQSRGLYAAKYGMLGGIHISSMLVPICKALANESEAVSTADIL 825
Query: 250 SRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNV 309
+ FF+ ++ + W ++ P + + +H R + + ++ P N++
Sbjct: 826 TTFFQHYSKFNWETGMVFDPFYHLGLKYH--------RTFREPLCLLGWHGPSLNAASTA 877
Query: 310 SSTTLRIMQEEFQRAKELCEEIEAGKRTW------------ITLFE--PYHFFGSFKNYL 355
S +T+ + E RA L + + TW +TL E F S+++Y
Sbjct: 878 SISTVNALTSELVRAAALFHQQDV---TWSRFLGLEQSATPLTLIEKGAADFLNSYRSY- 933
Query: 356 QIHIAAKNAGDF----RQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSS 411
I I+A+ G R++ GW+ESR ++ I R ++ R++P F++ +S+
Sbjct: 934 -IKISARYWGSSQQKGRKYLGWLESRCISILVDISRKSPSLIP-RMWPARFADEDPTNST 991
Query: 412 -------QCHYFMGLGRKQGVSPQDGEKFDMRLTVEEFKSHVV 447
Y +GL + VS +K L E HV+
Sbjct: 992 YDQTSELNACYLVGLKWDENVS----DKSTTSLATAEGNVHVI 1030
>gi|407410523|gb|EKF32925.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 285
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 25/237 (10%)
Query: 213 RRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHW----KWPNPVMLC 268
RR +Y N + G+ A++VARVCQ+ P + PNVL+ FF +A W +PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARVCQVMPASHPNVLLRFFFLFYAQWLSRHDRISPVYIT 61
Query: 269 PI-----QYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQR 323
+ +P WDPR + R L+P+I P+YP N + NVS L + E
Sbjct: 62 TSLESRGRIPGLPDS-WDPRRDA-CRDDLLPVINPAYPYVNDARNVSRCGLEVFYAELTY 119
Query: 324 AKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAA------KNAGDFRQWKGWVESR 377
A L E T+++P++ ++ + +++ K W +V S+
Sbjct: 120 AHRLLSNSETPLE---TIWKPFNILDNYSTFFVVNVTCEEETEEKLEAVLSVWSSYVLSK 176
Query: 378 LRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFM-GLGRKQGVSPQDGEKF 433
LR L++ +ER ++ R YP ++ ++S + F+ G G+ + G +F
Sbjct: 177 LRILLYALER----IVDARPYPQKLNDVPLRSVPKSGCFLKGSSFIVGIREKVGRRF 229
>gi|456389475|gb|EMF54915.1| hypothetical protein SBD_4583 [Streptomyces bottropensis ATCC
25435]
Length = 930
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 157/396 (39%), Gaps = 58/396 (14%)
Query: 27 EKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGV 86
E +A EE L R E G + V D I R+ D + GS R+G
Sbjct: 554 EVSWAEEEPVLHRAEGEGEVG--VADRITRLVADA---------FPGGVVHVVGSRRMGC 602
Query: 87 AGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSV 146
A P D+D + P A +L + +E D+ V ARVP ++ + +GV+V
Sbjct: 603 ALPGADLDLVAALPGTA--------ELTSVQRELREAVDVREVVGARVPGLRLRLDGVNV 654
Query: 147 DLLYAQLQFSVIPEDLDSLQD-SLLHNLDEQTVLSLNGCRVTDRILSLVPNIR-NFRSTL 204
DL V LD ++ + L E ++L+ + +L+ V F
Sbjct: 655 DLAV------VATGSLDPVEAVARRTELGEAAAVALSAVSDAEAVLASVGGHEPAFAGLA 708
Query: 205 RCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNP 264
R ++ WA+ RG+ S G L G+ W++L AR + P+ L+ FF +A W W P
Sbjct: 709 RQVKAWARARGLDSAPFGGLPGLAWSVLAARTVSEAGDLPPDGLLRHFFATWAAWDWREP 768
Query: 265 VMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRA 324
V +P + I+TPS P + V++ ++ +E RA
Sbjct: 769 VGGPGGTSGRLP----------------LTIVTPSAPVRPCTDQVTTGMRDLITQELFRA 812
Query: 325 KELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHM 384
EL EE +W L P + + + AG + G V R+R L+
Sbjct: 813 WELLEE----GSSWADLLTPPPLHRRHAAWAIVTVGGGPAGVADE--GRVRGRMRALVTD 866
Query: 385 IERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLG 420
+ G C +P F +++ Y +GLG
Sbjct: 867 LAEVAPG---CHAWPRPF------TTAPARYAIGLG 893
>gi|71657771|ref|XP_817395.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70882585|gb|EAN95544.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 406
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNP----------VMLCPIQYQAMPHHVWDPRSNQRDR 289
+PN +V RFF+I+ W PNP + ++ + WDPR ++ D
Sbjct: 5 HPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRESKSDA 64
Query: 290 KHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEI------EAGKR-----TW 338
L P++TP+ P N+ +NV+ T LR + EF R E+C EA R W
Sbjct: 65 MALFPVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGIW 124
Query: 339 ITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQL 381
L EP FFG K YL + ++ +A ++ + VES++R L
Sbjct: 125 SRLLEPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESKIRFL 167
>gi|441666296|ref|XP_003275413.2| PREDICTED: poly(A) polymerase alpha [Nomascus leucogenys]
Length = 432
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 293 MPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFK 352
MPIITP+YP NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYK 60
Query: 353 NYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKS 409
+Y+ + +A +W G VES++R L+ +E++ L + P F EN K
Sbjct: 61 HYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDKE 119
Query: 410 SSQCHYFMGLGRKQGVSPQDGEKFDMRLT--VEEFKSHVVWMYSSWKQ---GMQIHVSHL 464
+ + +GL K+ ++ E + LT ++ F V + K M+I H+
Sbjct: 120 EFRTMWVIGLVFKKT---ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHV 176
Query: 465 RCQDIPDFVFPGGVRPPKSLNEKKRKRIEVIE 496
+ + + + P V L +KK+ +E ++
Sbjct: 177 KRKQL-HQLLPNHV-----LQKKKKVNLEKVK 202
>gi|291441787|ref|ZP_06581177.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
14672]
gi|291344682|gb|EFE71638.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
14672]
Length = 973
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 152/404 (37%), Gaps = 56/404 (13%)
Query: 73 NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDA 132
+ + GS R+G A D+D + P D R+ P + V A
Sbjct: 617 DGVVHVVGSRRMGCALAGADLDLVAALPGGV----DLADVRARVTAALPDGTRVRQVTGA 672
Query: 133 RVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQD-SLLHNLDEQTVLSLNGCRVTDRIL 191
RVP ++ + + VDL+ V LD + + LD+ ++L+ D +
Sbjct: 673 RVPGLRLRTGDLDVDLVV------VATGTLDPGEAVARRAELDQAAAIALSAVSDADAVR 726
Query: 192 SLVPNIRN-FRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVS 250
+ V + F R ++ WA RG+ S G L G+ W++L AR + ++ L+
Sbjct: 727 AAVGDHHTAFTRLARQVKAWAGARGLDSAPFGGLPGLAWSVLAARTAREATDSAAPDLLR 786
Query: 251 RFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPII--TPSYPCTNSSYN 308
FF +A W W +PV L P PH P++ TP+ P N +
Sbjct: 787 HFFGTWAAWDWRDPVGLAPTGTG--PH---------------TPVVLMTPTDPVRNCTGQ 829
Query: 309 VSSTTLRIMQEEFQRAKELCE-EIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDF 367
V + ++ +E RA + E +A W L P + + + A +F
Sbjct: 830 VGAGFRDLLTDELYRAWTILETAADADTNPWPELLSPPSLHRRHAAWAVLTVRPGPAEEF 889
Query: 368 RQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSP 427
+ G V RLR L+ +E G +P F Y +GLGR +P
Sbjct: 890 EETSGRVRGRLRALLTALED--AGAADAYAWPRPFE----TGPGFVRYAIGLGR----TP 939
Query: 428 QDGEKFDMRLTVEEFKSHVVWMYSSWKQGMQ-IHVSHLRCQDIP 470
D + + W +G++ + V+ C +P
Sbjct: 940 LDAARLAE-------------ISEEWGRGLRGVDVTWAECGTVP 970
>gi|162448422|ref|YP_001610789.1| polynucleotide adenyltransferase [Sorangium cellulosum So ce56]
gi|161159004|emb|CAN90309.1| Polynucleotide adenyltransferase [Sorangium cellulosum So ce56]
Length = 961
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 136/362 (37%), Gaps = 42/362 (11%)
Query: 73 NAKLFTFGSYRLGVAGPSTDID--ALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVP 130
L GS RLG A P D+D A GP D ++ P + V
Sbjct: 588 GGALHVTGSRRLGCALPGADLDLVAALPGPI------DLDAVEVQVRSALPEASTVRRVE 641
Query: 131 DARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRI 190
RVP ++ G+ DL +V PE + + L E ++L+ D +
Sbjct: 642 AIRVPCLELCAVGLDADLTLVD-AGAVRPEHAVARR----LELGEAAAMALSAVTDADAL 696
Query: 191 LSLV----------PNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY 240
L V F + R ++ WA+ +GI + G L GI W +L ARV
Sbjct: 697 LEAVDAASAPSAAPRRREAFLALGRAVKAWARAKGIDAAPFGGLPGIAWLVLAARVVCDA 756
Query: 241 PNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSY 300
P+ P L+SRFF +A W + P+ L P V P R I TP+
Sbjct: 757 PDLEPGPLLSRFFGAWAAWDFRRPIALDPSAPA-----VGTPGDPVR-------IATPTA 804
Query: 301 PCTNSSYNVSSTTLRIMQEEFQRAKELCEE-IEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
P + S V + L + +E A E E + AG+ L P + I +
Sbjct: 805 PVRSCSDTVGAAALATLSDELYSAWEAVESALAAGRDPLPDLLAPPPLHRRHAAWAVITV 864
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGL 419
A GWV R+R L+ ER GV R +P F + + +GL
Sbjct: 865 EAPEPEGVASGLGWVRGRIRALLSSFER--AGVGDLRAWPHAFD----RGPRLARHAIGL 918
Query: 420 GR 421
G+
Sbjct: 919 GK 920
>gi|290958156|ref|YP_003489338.1| hypothetical protein SCAB_36991 [Streptomyces scabiei 87.22]
gi|260647682|emb|CBG70787.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 925
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 133/349 (38%), Gaps = 60/349 (17%)
Query: 80 GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKF 139
GS R+G A P D+D + P G L R L V ++ ARVP ++
Sbjct: 592 GSRRMGCALPGADLDLVAALPGTVE-----LGSLRRELGGASEVREVV---GARVPGLRL 643
Query: 140 KFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNL-------DEQTVLSLNGCRVTDRILS 192
+F+G+ VDL E +D + D + VL+ G R
Sbjct: 644 RFDGLDVDLAVVATGAMDPGEAVDRRAELGEAAALALSAVSDAEAVLASVGGRGP----- 698
Query: 193 LVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRF 252
F R ++ WA+ RG+ S G L G+ W++L AR + P+ L+ F
Sbjct: 699 ------AFAGLARQVKAWARARGLDSAPFGGLPGLAWSVLAARTAGEAGDLPPSCLLRHF 752
Query: 253 FKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSST 312
F +A W W PV + P + + TPS P + + V++
Sbjct: 753 FATWAAWDWREPVG----GLEGAP-------------AGPLTVATPSAPVRSCTDQVTAD 795
Query: 313 TLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKG 372
++ +E RA EL EE +W + P + + A G + G
Sbjct: 796 MRDLITQELFRAWELLEE----GASWTEVLAPPPLHRRHAAWAVVTAGAGTDGVVDE--G 849
Query: 373 WVESRLRQLIHMIERDMGGVL-QCRLYPGDFSENSVKSSSQCHYFMGLG 420
V R+R LI D+ G+ C +P F+ V+ Y +GLG
Sbjct: 850 RVRGRMRALIT----DLAGLAPGCHAWPRPFATAPVR------YAIGLG 888
>gi|433605790|ref|YP_007038159.1| Polynucleotide adenyltransferase [Saccharothrix espanaensis DSM
44229]
gi|407883643|emb|CCH31286.1| Polynucleotide adenyltransferase [Saccharothrix espanaensis DSM
44229]
Length = 892
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 151/403 (37%), Gaps = 80/403 (19%)
Query: 69 IQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTP 128
+ A ++ GS R G A P D+D + V D + R+ P L P
Sbjct: 566 LAAALGEVHVVGSRRTGCALPDGDLDLITVASAA-----DAVAERVRV--ALPAASALRP 618
Query: 129 VPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTD 188
V AR P + G+ VDL A + P SL D+ + VL+ G RV D
Sbjct: 619 VVGARSPGWRLDVGGLGVDLTVA---VAGNPAAWSSLGDA-------EAVLAAVGDRV-D 667
Query: 189 RILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVL 248
R FR R ++ WA+ RG+ S G + G+ WA+L AR +
Sbjct: 668 R----------FRRLAREVKGWARARGLDSAPFGGVPGVGWAVLAARTVLDAGDGFDGGG 717
Query: 249 VSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYN 308
++ FF +A W W +P+ L A+P P + I+TP+ P + +
Sbjct: 718 LAEFFGTWAAWDWRDPIGL-----GAVPERTGAP----------VTIMTPAAPVRSCTEQ 762
Query: 309 VSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFR 368
V ++ E RA E+ +EAG L P + + + G R
Sbjct: 763 VGPGFRDLLTAELYRAWEV---VEAGG---TDLATPPDLHRVHAAWAVVTVPHDRVGPVR 816
Query: 369 QWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQ 428
RLR L+ +E GV +P F + + +GLGR+ P
Sbjct: 817 -------GRLRALLTALE--TAGVADADAWPRPFE----RDRDAVRFAIGLGRR----PP 859
Query: 429 DGEKFDMRLTVEEFKSHVVWMYSSWKQGMQ-IHVSHLRCQDIP 470
D V E + + W+ G+ + V + D+P
Sbjct: 860 D---------VAELGR----LVAGWRAGLTGVEVVRVANGDVP 889
>gi|353236816|emb|CCA68803.1| related to poly(A) polymerase [Piriformospora indica DSM 11827]
Length = 1198
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 163/371 (43%), Gaps = 41/371 (11%)
Query: 75 KLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQE--------TPLVEDL 126
KL GSY LGV +DID L VG + + R+L + T +V+
Sbjct: 611 KLEAVGSYALGVHTCESDIDCLAVGNI--SPQTFWLLARSRLLAQAKQQTGTGTTVVKLR 668
Query: 127 TPVPDARVPVIKFKFNGVSVDLLYAQL-----QFSVIPEDLDSLQDSLLHNLDEQTVLSL 181
V DA V +++ + +G+ +DL Y ++S IPE DS L L ++++L
Sbjct: 669 RFVKDAAVQMMELEAHGIKIDLQYCVAPKLVERWSEIPE---IPVDSPLFALPASSLVTL 725
Query: 182 NGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP 241
+ R + ++P++ F R L+ + RRG+ G+LGG + LL+ RV P
Sbjct: 726 SAYRDVLILRRVIPSLSAFVKAHRALKLFLSRRGLVGARFGYLGGFHLTLLLTRVAITLP 785
Query: 242 N----ALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIIT 297
+ + P+ LV F + +A W W + PI A R QR+ M +++
Sbjct: 786 HSAGRSAPH-LVEAFLREYAVWDWTQDTV-HPIPAAAAVGTGAYKRVVQREP---MAVLS 840
Query: 298 PSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITL--FEPYH-FFGSFKNY 354
S P N + N S ++ + Q A +++G TW+ + P F ++++
Sbjct: 841 ISKPQKNIASNASWNSVASLSHGLQTAN---ATLQSGG-TWLDVCGTNPLKSFIDEYRSF 896
Query: 355 LQI--HIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSS- 411
++I H + R GW+ES++ L+ + + V RL+P + SV +
Sbjct: 897 VKIEVHYWGGDCMQGRALMGWLESKIVSLLVQLHMTVPEV-TARLWPQRLVDESVVDPNT 955
Query: 412 ---QCHYFMGL 419
Y +GL
Sbjct: 956 RDPNSFYLLGL 966
>gi|361066261|gb|AEW07442.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142733|gb|AFG52754.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142735|gb|AFG52755.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142737|gb|AFG52756.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142739|gb|AFG52757.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142741|gb|AFG52758.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142743|gb|AFG52759.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142745|gb|AFG52760.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142747|gb|AFG52761.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142749|gb|AFG52762.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142751|gb|AFG52763.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142753|gb|AFG52764.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142755|gb|AFG52765.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142757|gb|AFG52766.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142759|gb|AFG52767.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
Length = 104
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 46/54 (85%), Gaps = 1/54 (1%)
Query: 430 GEKFDMRLTVEEFKSHVVWMYSSWKQGMQIHVSHLRCQDIPDFVFPGGVRPPKS 483
GE+FD+R+TV+EF+ H V MY+ WK GM+I+VSH++ + IP FVFPGGVRPP++
Sbjct: 1 GEQFDIRVTVDEFR-HSVKMYTLWKPGMEINVSHIKRRSIPSFVFPGGVRPPRT 53
>gi|254385996|ref|ZP_05001313.1| hypothetical protein SSAG_05655 [Streptomyces sp. Mg1]
gi|194344858|gb|EDX25824.1| hypothetical protein SSAG_05655 [Streptomyces sp. Mg1]
Length = 649
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 152/406 (37%), Gaps = 71/406 (17%)
Query: 80 GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKF 139
GS R+G A P D+D + P + R+ P E L V ARVP ++F
Sbjct: 301 GSRRMGCARPGADLDLVAALPGAVGGAE----VRERIAAALPEAERLREVRGARVPGLRF 356
Query: 140 KFNGVSVDLLYAQLQFSVIPEDLDSLQD-SLLHNLDEQTVLSLNGCRVTDRIL-SLVPNI 197
+ G+ VDL+ V LD + L E ++L+ D + S+
Sbjct: 357 RVAGLDVDLVV------VATGGLDPAGALARRAELGEAAAVALSAVSDADAVRESVGAEH 410
Query: 198 RNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQ----LYPNALP------NV 247
F R ++ WA+ RG+ S G L GI WA+L AR + L P+ L +
Sbjct: 411 AAFARLAREVKAWARARGLDSAPFGGLPGIAWAVLAARTVREAAALSPDGLSPDGLSLDG 470
Query: 248 LVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSY 307
L+ FF +A W W +PV L HH P + + ++TPS P + +
Sbjct: 471 LLREFFGAWAAWDWCDPVAL---------HHP-PPAPGS---EGAVTVLTPSEPVRSCTA 517
Query: 308 NVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDF 367
V ++ E E E +AG P + + + +F
Sbjct: 518 QVGPGLRDLLGRELY---EAWESPQAG---------PPAPHRRHAAWAVVTVRGATPQEF 565
Query: 368 RQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSP 427
+ G RLR L+ +E GGV + +P F + + Y +GL G P
Sbjct: 566 EESLGRTRGRLRALLGALEE--GGVAEAHAWPRPFE----RGDTVARYAIGL----GAEP 615
Query: 428 QDGEKFDMRLTVEEFKSHVVWMYSSWKQGM-QIHVSHLRCQDIPDF 472
D + + + W + + V+ C ++PD
Sbjct: 616 PDAARLAA-------------LCAPWATALVGVEVARAECGEVPDL 648
>gi|46805331|dbj|BAD16850.1| unknown protein [Oryza sativa Japonica Group]
Length = 62
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/42 (73%), Positives = 35/42 (83%)
Query: 204 LRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALP 245
LRC++ WAK RG+YSN GFLGGI WA+LVARVCQLYPN P
Sbjct: 2 LRCVKHWAKARGVYSNVAGFLGGIGWAILVARVCQLYPNTSP 43
>gi|56785136|dbj|BAD81791.1| unknown protein [Oryza sativa Japonica Group]
Length = 62
Score = 76.6 bits (187), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/42 (71%), Positives = 35/42 (83%)
Query: 204 LRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALP 245
LRC++ WAK RG+YSN GFLGGI WA+LVAR+CQLYPN P
Sbjct: 2 LRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSP 43
>gi|297192707|ref|ZP_06910105.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
gi|297151463|gb|EFH31180.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 359
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 116/281 (41%), Gaps = 42/281 (14%)
Query: 62 GISDEEQIQE----------ANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFG 111
G+S+EE++ A+ + GS R+G P D+D + P + G
Sbjct: 3 GVSEEERVPGDVREQAERALADGCVHLVGSRRMGCELPGADLDLVAALPG----SPELAG 58
Query: 112 KLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLH 171
R+ P + V ARVP ++ G++VDL+ +V P + +
Sbjct: 59 VRARLTAALPEATGVREVVGARVPGLRMSVGGLAVDLVVVA-TGAVDPAEAVGRR----T 113
Query: 172 NLDEQTVLSLNGCRVTDRILSLVPNIRN-FRSTLRCLRFWAKRRGIYSNAMGFLGGINWA 230
L E ++L+ D +L V + R F R ++ WAK RG+ S G L G+ W+
Sbjct: 114 ELGEDAAIALSAVSDADALLDQVADRREAFTDLARRVKAWAKARGLDSAPFGGLPGLAWS 173
Query: 231 LLVARVCQLYPNALP-NVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDR 289
+L AR + ALP + L+ FF +A W W PV R
Sbjct: 174 VLAARTVR-EAGALPSDELLRHFFATWAAWDWREPV-------------------GGPAR 213
Query: 290 KHL-MPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCE 329
L M ++TP+ P S V+ ++ +E RA E+ +
Sbjct: 214 PDLPMTVMTPTAPVRPCSDQVTEGMRDLITQELFRAWEVLD 254
>gi|302532764|ref|ZP_07285106.1| polynucleotide adenyltransferase [Streptomyces sp. C]
gi|302441659|gb|EFL13475.1| polynucleotide adenyltransferase [Streptomyces sp. C]
Length = 430
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 119/298 (39%), Gaps = 30/298 (10%)
Query: 78 TFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVI 137
T GS R+G A P D+D + V P A D G R+ P L V ARVP +
Sbjct: 80 TVGSRRMGCALPGADLDLVAVLPGPA----DAAGVRARVAAALPGARRLREVTGARVPGL 135
Query: 138 KFKFNGVSVDLLYAQLQFSVIPEDLD-SLQDSLLHNLDEQTVLSLNGCRVTDRIL-SLVP 195
+ G+ VDL+ V LD L + L E ++L+ D + S+
Sbjct: 136 RLHAYGLDVDLVL------VGAGALDPGLAVARRAELGEAAAVALSALDDADAVRESVGA 189
Query: 196 NIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL----YPNALPNVLVSR 251
+ F S R + WA+ RG+ S G L G+ WA+L AR + + P L
Sbjct: 190 SHAAFASLAREAKAWARARGLDSAPFGGLPGLAWAVLAARTVREAVRDAADLSPAGLRRE 249
Query: 252 FFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSS 311
FF +A W W PV L P RS D + ++TP P + + V
Sbjct: 250 FFGTWAAWDWSEPVSLLPADGAG--------RSPSPD---PVTVLTPRAPVRSCTAQVGP 298
Query: 312 TTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQ 369
++ E RA E+ E G +T P H + + + A AG+F +
Sbjct: 299 GMRDLLVRELYRAWEVLEADPDGLGR-LTAPPPLHR--RHAAWAVVTVRAGAAGEFEE 353
>gi|449673865|ref|XP_004208051.1| PREDICTED: poly(A) polymerase alpha-like, partial [Hydra
magnipapillata]
Length = 144
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
I+ S P +D TK LE+ L D +F ++E+ R+ VL +L+ + +WI + ++ K +
Sbjct: 23 INLSGPKEIDEELTKSLEETLKDYGVFETQEQIQHRMVVLEKLNKLALEWIVKTSIAKNM 82
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLV 123
E K+FTFGS+RLGV DID L V P + R DFFG + L+
Sbjct: 83 P-ESVANSVGGKIFTFGSFRLGVHTKGADIDTLLVAPRHIERA-DFFGSFYEFLKNREET 140
Query: 124 EDL 126
+DL
Sbjct: 141 KDL 143
>gi|403334159|gb|EJY66233.1| Poly(A) polymerase PAPalpha [Oxytricha trifallax]
Length = 665
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 154/411 (37%), Gaps = 106/411 (25%)
Query: 79 FGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLT--PVPDARVPV 136
FGS G +DID L + +DFF K F ++P V + +P A++P+
Sbjct: 119 FGSGMFGGFDKHSDIDVLLSSFKFLLSREDFFSK-FSAYLKSPEVGAIIHQEIPQAQIPI 177
Query: 137 IKFKFNGVSVDLLYAQLQFSVIPEDLDSLQ-DSLLHNL-----DEQTVLSLNGCRVTDRI 190
IKF+F D+LY + + L+ D ++ V S G +
Sbjct: 178 IKFEFMSKQFDVLYCSMLTPISQHQRCQLEKDQYFFEFSNVVQEKVDVFSFRGWSNCQYM 237
Query: 191 LSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN-------- 242
+ + F L+ ++ WAK++G+Y G+L GI+ +++ +V ++
Sbjct: 238 YERIKDKEAFGWGLKIIKAWAKKKGLYGFNFGYLNGISLIIMLGKVDKMIRRERFQSDYC 297
Query: 243 --------------ALPN--------------VLVSRFFKIFAHWKWPNPVMLCPIQYQA 274
+PN LV++FF++++ W P+ +
Sbjct: 298 DDTLSRNVNNQLSFTIPNRTLKSNNKIEDRVCELVTKFFEVYSKWDSKQPIFFQDNNSWS 357
Query: 275 MPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEI--- 331
M ++ K + PI+TP P +++ +++++L + E+ Q A+ LC I
Sbjct: 358 MDQDLYSVC-----LKEVFPIVTPERPYKCTTHQINTSSLNHIMEQLQTAQNLCILIQKR 412
Query: 332 --------------------------------EAGKRTWITLFEPYHFFGSFKNYLQIHI 359
E G+ TW LF PY FF +LQI +
Sbjct: 413 QLILDLVKYQNDNAFDKFGNPKKDNYNLSILKEFGQVTWKDLFNPYQFFTQHTIFLQIEV 472
Query: 360 AA---------KNAGD------------FRQWKGWVESRLRQLIHMIERDM 389
N D ++KG ESR + L M+E+ +
Sbjct: 473 MTDVNISQYNYDNVPDDPIGQYEVVLKHHHEYKGLFESRFKLLQLMMEQSL 523
>gi|385300970|gb|EIF45209.1| poly polymerase [Dekkera bruxellensis AWRI1499]
Length = 122
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
+S ++P+ +V + + L ++ F +E+ R +VL L IV++++ V+ K +
Sbjct: 15 VSIASPSPEEVKMNDAMIEELRNQNSFETEDGVQKRRKVLATLQTIVQEFVYTVSRKKNM 74
Query: 64 SDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDF 109
S E ++A KLFTFGSYRLGV GP +DID L V P + T+ D F
Sbjct: 75 S-EGMSKDAGGKLFTFGSYRLGVYGPGSDIDTLVVVPKHVTKEDFF 119
>gi|320590446|gb|EFX02889.1| duf455 domain containing protein [Grosmannia clavigera kw1407]
Length = 498
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 129/309 (41%), Gaps = 79/309 (25%)
Query: 136 VIKFKFNGVSVDLLYAQLQFSVIPEDLDSL-----QDSLLHNLDEQTVLSLNGCRVTDRI 190
+++ NG+ V+L Y Q +V+ E ++ +L+ L QT+ L
Sbjct: 1 MLEVSVNGLHVNLQYCQA--AVVAETWPAVLVVAADHALITTLSPQTLSRLKA------- 51
Query: 191 LSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP--------- 241
+ R ++ WA+ RG+Y+ G+LGGI A+L+ARV +L
Sbjct: 52 -----------TAYRSIKTWARSRGLYAARFGYLGGIQIAVLLARVMKLMAAATDDDDDD 100
Query: 242 --NALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
+A+P++L + FF+ +A + W + P + HV R P++
Sbjct: 101 DSSAVPDILAT-FFRDYAGFDWATQMAFDPFFHGHKAPHV---------RTAGEPLVILG 150
Query: 300 Y--PCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYH----------- 346
Y P N+S + S +++R++ E +RA L + AG+ +W
Sbjct: 151 YHRPQLNTSMSASVSSVRVLAAELRRADRL---LSAGRISWDAFLGGGGDEGDSSTIVAG 207
Query: 347 --------FFGSFKNYLQIH-----IAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVL 393
F +++ Y++I ++ + F GW+ESR L+ + R + L
Sbjct: 208 RLLSGAATFVCAYRTYVKIDLQYWGLSLQRGASF---VGWLESRCAMLLVDVARRLPQ-L 263
Query: 394 QCRLYPGDF 402
++PG F
Sbjct: 264 NTHIWPGRF 272
>gi|429200719|ref|ZP_19192393.1| Tat pathway signal sequence domain protein [Streptomyces ipomoeae
91-03]
gi|428663602|gb|EKX62951.1| Tat pathway signal sequence domain protein [Streptomyces ipomoeae
91-03]
Length = 985
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 140/370 (37%), Gaps = 51/370 (13%)
Query: 60 DKGISDE--EQIQEA--NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFR 115
D ++D I EA + + GS R+G A P D+D + P +
Sbjct: 621 DTAVADRIIPGITEALPDGVVHVVGSRRMGCALPGADLDLVAALPGTV----ELAAVQAE 676
Query: 116 MLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDE 175
+ + P D+ V ARVP ++ + + + VDL+ E +D + L E
Sbjct: 677 LSKALPEAADVREVVGARVPGLRLRLDRLDVDLVVVATGSMDPAEAVDRRVE-----LGE 731
Query: 176 QTVLSLNGCRVTDRIL-SLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVA 234
++L+ D +L S + F R ++ WA+ RG+ S G L G+ W++L A
Sbjct: 732 AAAVALSAVSDADAVLASAGAHGPAFARLARQVKAWARARGLDSAPFGGLPGLAWSVLAA 791
Query: 235 RVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMP 294
R + P L+ FF +A W W PV Q A+P +
Sbjct: 792 RTAGEAGDLPPYDLLRHFFATWAAWDWRTPVGPA-GQSHALP----------------LT 834
Query: 295 IITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEI---EAGKRTWITLFEPYHFFGSF 351
I TPS P + V++ ++ +E RA E+ E + W L P
Sbjct: 835 ITTPSAPIRPCTDQVTAGMRDLVTQELFRAWEVLEGAPTDPTARYPWAELLAPPPLHRRH 894
Query: 352 KNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVL-QCRLYPGDFSENSVKSS 410
+ A AG G E RLR + D+ C +P F ++
Sbjct: 895 AAW-----AVVTAG-----PGADEGRLRGRTRSLITDLAETTPDCHAWPRPF------TT 938
Query: 411 SQCHYFMGLG 420
+ Y +GLG
Sbjct: 939 TPTRYAIGLG 948
>gi|62088188|dbj|BAD92541.1| poly(A) polymerase gamma variant [Homo sapiens]
Length = 382
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 134/289 (46%), Gaps = 26/289 (8%)
Query: 316 IMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVE 375
+M EEF++ + +EI GK W L EP +FF +++Y+ + +A + +W G VE
Sbjct: 3 VMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVE 62
Query: 376 SRLRQLIHMIERDMGGVL---QCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVSPQDGEK 432
S++R L+ +ER+ L + +PG+ E+ ++ +F+G+ ++ V +
Sbjct: 63 SKIRVLVGNLERNEFITLAHVNPQSFPGN-KEHHKDNNYVSMWFLGIIFRR-VENAESVN 120
Query: 433 FDMRLTVEEFKSHVVWMYSS---WKQGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNEKKR 489
D+ ++ F V ++ K+GM+I +H++ + + ++ P + L +KK+
Sbjct: 121 IDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL------PAEILQKKKK 174
Query: 490 KRI-EVIESTKLKKSESSTAGHSSGQKSSQTESGVALDGSHGLKSGPSVEPSTSSVSSST 548
+ + +V S+ +S+ + S S T++G + P++ S S S
Sbjct: 175 QSLSDVNRSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNS-----------PASKSDSPSV 223
Query: 549 SASSRPQRPAVSIETEDDNATSVSQAQNFNQVGATVAAALATGTISSFC 597
+ R ++ E + +Q + +GA V + + T + + C
Sbjct: 224 GETERNSAEPAAVIVEKPLSVPPAQGLSIPVIGAKVDSTVKTVSPPTVC 272
>gi|322692951|gb|EFY84832.1| Poly(A) polymerase type 3 [Metarhizium acridum CQMa 102]
Length = 274
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 93/189 (49%), Gaps = 26/189 (13%)
Query: 207 LRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY----PNALPNVLVSRFFKIFAHWKWP 262
L+ WAK RG+YS+ +G LG +N ++++ +C+L P+A +++ FF + ++ W
Sbjct: 11 LKAWAKSRGLYSSKLGLLGSLNISVMLVPICKLLAYDGPSAGTTDILTTFFHHYRNFDWK 70
Query: 263 NPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQ 322
++L P+ + + +H QR+ L+ TPS N++ N +++T+ I+ E
Sbjct: 71 TNMVLDPLFHGTVKYH-----RTQRESMCLLGWHTPS---RNTALNATASTIHILSAEIM 122
Query: 323 RAKELCEEIEAGKRTW------------ITLFEPYHFFGSFKNYLQIHIAAKNAG--DFR 368
RA +L + T+ +T F S K Y++++ + +
Sbjct: 123 RASDLLSQEGVNWDTFLRGTQSLLPFPELTACNAAGFLDSHKCYIKMNASYLGCSPRKGK 182
Query: 369 QWKGWVESR 377
++ GW+ESR
Sbjct: 183 RFVGWLESR 191
>gi|218200294|gb|EEC82721.1| hypothetical protein OsI_27409 [Oryza sativa Indica Group]
Length = 293
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%)
Query: 292 LMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSF 351
MPI+ P P + N++ T + ++EE R L +E W+ LF P+ + +
Sbjct: 92 FMPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKY 151
Query: 352 KNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIE 386
+ +L+I + A + + R W GWV+SR R LI +E
Sbjct: 152 EEFLRIALCAPTSEELRDWAGWVKSRFRNLILKLE 186
>gi|53136848|emb|CAG32753.1| hypothetical protein RCJMB04_34p17 [Gallus gallus]
Length = 109
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS +AP D + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K +
Sbjct: 25 ISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL 84
Query: 64 SDEEQIQEANAKLFTFGSYRLGV 86
+ I+ K+FTFGSYRLGV
Sbjct: 85 P-QSVIENVGGKIFTFGSYRLGV 106
>gi|413933520|gb|AFW68071.1| hypothetical protein ZEAMMB73_464170 [Zea mays]
Length = 546
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 16 STKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAK 75
S + L K L DE + S E+ R +V+ L IV W V ++ + A A
Sbjct: 208 SDQFLSKFLKDEGVVLSPEDENKREKVIRELKKIVMHWANAVAYEQSVPQ----GLATAT 263
Query: 76 LFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFF 110
+ T+ SY LG GP ++ID LC+GPC AT FF
Sbjct: 264 VLTYDSYTLGAHGPESNIDLLCLGPCIATLQYHFF 298
>gi|344249366|gb|EGW05470.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 63
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%)
Query: 293 MPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFK 352
MPIITP+YP NS+YNVS +T +M EEF++ + +EI K W LFE +FF +K
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYK 60
>gi|413933521|gb|AFW68072.1| hypothetical protein ZEAMMB73_464170 [Zea mays]
Length = 763
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 16 STKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAK 75
S + L K L DE + S E+ R +V+ L IV W V ++ + A A
Sbjct: 208 SDQFLSKFLKDEGVVLSPEDENKREKVIRELKKIVMHWANAVAYEQSVPQ----GLATAT 263
Query: 76 LFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFF 110
+ T+ SY LG GP ++ID LC+GPC AT FF
Sbjct: 264 VLTYDSYTLGAHGPESNIDLLCLGPCIATLQYHFF 298
>gi|351701159|gb|EHB04078.1| Poly(A) polymerase alpha [Heterocephalus glaber]
Length = 298
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 7 SAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDE 66
S P + + T++L + L +F EEE R+ +LG+L+ +VK+WI+ ++ K + +
Sbjct: 74 STPKETNWVLTQKLNETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNL-PQ 132
Query: 67 EQIQEANAKLFTFGSYRLGV 86
I+ K+FTFGSYRLGV
Sbjct: 133 SVIENVGGKMFTFGSYRLGV 152
>gi|116196384|ref|XP_001224004.1| hypothetical protein CHGG_04790 [Chaetomium globosum CBS 148.51]
gi|88180703|gb|EAQ88171.1| hypothetical protein CHGG_04790 [Chaetomium globosum CBS 148.51]
Length = 891
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 26/192 (13%)
Query: 185 RVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQ------ 238
R TD + +P+ FR R ++ WAK RGIY+ GFL GI ++L+ARV +
Sbjct: 637 RDTDYLARSLPDPPTFRLAHRAIKTWAKSRGIYAARFGFLSGIQISILLARVHKLLTRTT 696
Query: 239 -----LYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQ-AMPHHVWDPRSNQRDRKHL 292
P L++ FF +A + W + + P ++ A+P+ R +
Sbjct: 697 TTTPTRTTPPTPETLLTTFFTHYATFDWAHQLAFDPFFHRHALPY--------TRTPREP 748
Query: 293 MPIITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLF-----EPYHF 347
+ ++ P N++ S + + + EF+RA ++ E G W F
Sbjct: 749 LAVLGYFAPARNTALAASVPSTKTLAAEFRRAADVLRG-ENGALGWAGFLGGGSGAKDDF 807
Query: 348 FGSFKNYLQIHI 359
+ ++Y+++ +
Sbjct: 808 LAAHRSYVKLDV 819
>gi|297726257|ref|NP_001175492.1| Os08g0278750 [Oryza sativa Japonica Group]
gi|255678316|dbj|BAH94220.1| Os08g0278750, partial [Oryza sativa Japonica Group]
Length = 103
Score = 54.7 bits (130), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
Query: 234 ARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQY 272
ARV L P LP++L+ RFF++FA WKWP+PVMLC I++
Sbjct: 28 ARVPVL-PQRLPSMLLPRFFRVFARWKWPSPVMLCAIEH 65
>gi|330841067|ref|XP_003292526.1| hypothetical protein DICPUDRAFT_157248 [Dictyostelium purpureum]
gi|325077222|gb|EGC30949.1| hypothetical protein DICPUDRAFT_157248 [Dictyostelium purpureum]
Length = 532
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Query: 70 QEANAKLFTFGSYRLGVAGPSTDID-ALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTP 128
Q +N KL +GSY +G++ P +DID AL G D + K+ + L+ P E L
Sbjct: 304 QLSNKKLSKYGSYVIGLSSPDSDIDVALLNGA-------DIYDKVLQKLKSNPSYEILEI 356
Query: 129 VPDARVPVIKF--KFNGVSVDL 148
PDA++P+I+F K N V DL
Sbjct: 357 RPDAKIPIIRFSDKINLVKFDL 378
>gi|171688608|ref|XP_001909244.1| hypothetical protein [Podospora anserina S mat+]
gi|170944266|emb|CAP70376.1| unnamed protein product [Podospora anserina S mat+]
Length = 565
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 9/155 (5%)
Query: 72 ANAKLFTF------GSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVED 125
A A+L +F GSY LGV S+DID C+GP + R T V +
Sbjct: 396 AAARLQSFVVVVPVGSYALGVWTTSSDIDVCCIGPFSSNTLFSVASSSLRK-AATQGVRN 454
Query: 126 LTPVPDARVPVIKFKFNGVSVDLLY--AQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
L V +++ + GV +DL Y A P L + +L QT+ L
Sbjct: 455 LRRVKANTGTMLELEVQGVRMDLQYCPAASVAQQWPNVLRLPAKDPVWSLAPQTLNKLKA 514
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYS 218
R D + +P+I +FR R ++ WA+ RG+YS
Sbjct: 515 IRDIDYLRRSLPDIESFRLAHRFIKTWARSRGVYS 549
>gi|341888961|gb|EGT44896.1| hypothetical protein CAEBREN_24044 [Caenorhabditis brenneri]
Length = 224
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 37/192 (19%)
Query: 28 KLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVA 87
K F E++ RV V+ +L I WIK + + +S ++ K FG Y LGV
Sbjct: 8 KSFEPIEDTEKRVTVIKKLTDIGNTWIKMIIASR-VSKGSNVK-TEGKCVAFGFYWLGVH 65
Query: 88 GPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVD 147
DID++ + P + ++ L +A V ++ + +GV VD
Sbjct: 66 SSGGDIDSVLIAP-------------------SSKIKKLNAAGNAFVLLMTMECDGVEVD 106
Query: 148 LLYAQLQFSVIPEDLD------SLQDSLL-------HNLDEQTVLSLNGCRVTD--RILS 192
LL A + + IP +LD S Q+SLL Q+VL + G TD + L
Sbjct: 107 LLIACMDLATIPANLDLTSDSPSDQESLLMYPKVLKFTSKTQSVLFI-GLEFTDVNKNLD 165
Query: 193 LVPNIRNFRSTL 204
L I NF+ T+
Sbjct: 166 LTTEIENFKKTV 177
>gi|349804279|gb|AEQ17612.1| putative poly polymerase alpha [Hymenochirus curtipes]
Length = 153
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 113 LFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLD 163
+ L++ V+DL V +A VPVIK F+G+ +D+L+A+L IPEDLD
Sbjct: 2 FYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLD 52
>gi|256396175|ref|YP_003117739.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
44928]
gi|256362401|gb|ACU75898.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
44928]
Length = 1007
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 135/364 (37%), Gaps = 75/364 (20%)
Query: 68 QIQEA--NAKLFTFGSYRLGVAGPSTDIDALCVGP------CYATRHDDFFGKLFRMLQE 119
+I EA A + GS R P+ DID + P R G R+ Q
Sbjct: 673 RITEALPEATIHLVGSRRTATHLPAADIDLVAAVPGAPDIGALERRVAKALGAGHRVRQ- 731
Query: 120 TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVL 179
LV ARVP ++ +S DL+ A + P D + + L E
Sbjct: 732 --LVA-------ARVPGLRIVTPRLSADLVLAP-TGDIPPADAVARR----AELGETIAS 777
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQL 239
SL+ + +++L P +R + WA+ RG+ + +G L G+ WAL+ AR L
Sbjct: 778 SLSAVSDAEALIALRPGPH-----VRVAKAWARARGLDAAPLGGLPGLAWALMAARCRDL 832
Query: 240 YPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMPIITPS 299
+ FF+ +A W + PI TP+
Sbjct: 833 ----------TDFFETWAAHSWQD------------------------------PIPTPT 852
Query: 300 YPCTNSSYNVSSTTLRIMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHI 359
P + + +++++ ++ EE E + + TL P + + I +
Sbjct: 853 APIRDLTLHLTASMRDLITEELYNG---WETVTSTPDPLPTLLAPPPMHRRHRRWAVITL 909
Query: 360 AAKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDF--SENSVKSSSQCHYFM 417
A +G V R R L+ + D GV +P F ++ + ++++ +
Sbjct: 910 RADGIEARDVLEGRVRGRTRSLLSAL--DEAGVTDTHAWPRAFHTADANANANTELRTAI 967
Query: 418 GLGR 421
GLGR
Sbjct: 968 GLGR 971
>gi|343172004|gb|AEL98706.1| Nucleotidyltransferase family protein, partial [Silene latifolia]
Length = 501
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 47/199 (23%)
Query: 73 NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDA 132
N ++ FGSYR G+ PS+DID + + + L R L + + + + + A
Sbjct: 161 NCRVEVFGSYRTGLYLPSSDIDVVILDSNIKSPQIG-LQALSRALSQKGIAKKIQVIGKA 219
Query: 133 RVPVIKF--KFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRI 190
RVP+IKF K V D+ + D+D NG + + I
Sbjct: 220 RVPIIKFVEKVTDVQFDVSF----------DVD------------------NGPKAAEYI 251
Query: 191 LSLVPNIRNFRSTLRCLRFWAKRR---GIYSNAMGFLGGINWALLVARVCQL-------- 239
++ + R L+ + ++R +YS +G ++ALL + L
Sbjct: 252 KDVISRLPPLRPLCLILKVFLQQRELNEVYSGGIG-----SYALLAMLIAMLKSVNEGQR 306
Query: 240 YPNALPNVLVSRFFKIFAH 258
YP VL+ +FF+ +AH
Sbjct: 307 YPEHNLGVLLVKFFEFYAH 325
>gi|343172002|gb|AEL98705.1| Nucleotidyltransferase family protein, partial [Silene latifolia]
Length = 501
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 47/199 (23%)
Query: 73 NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDA 132
N ++ FGSYR G+ PS+DID + + + L R L + + + + + A
Sbjct: 161 NCRVEVFGSYRTGLYLPSSDIDVVILDSNIKSPQIG-LQALSRALSQKGIAKKIQVIGKA 219
Query: 133 RVPVIKF--KFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRI 190
RVP+IKF K V D+ + D+D NG + + I
Sbjct: 220 RVPIIKFVEKVTDVQFDVSF----------DVD------------------NGPKAAEYI 251
Query: 191 LSLVPNIRNFRSTLRCLRFWAKRR---GIYSNAMGFLGGINWALLVARVCQL-------- 239
++ + R L+ + ++R +YS +G ++ALL + L
Sbjct: 252 QDVISRLPPLRPLCLILKVFLQQRELNEVYSGGIG-----SYALLAMLIAMLKSVNEGQR 306
Query: 240 YPNALPNVLVSRFFKIFAH 258
YP VL+ +FF+ +AH
Sbjct: 307 YPEHNLGVLLVKFFEFYAH 325
>gi|410075647|ref|XP_003955406.1| hypothetical protein KAFR_0A08370 [Kazachstania africana CBS 2517]
gi|372461988|emb|CCF56271.1| hypothetical protein KAFR_0A08370 [Kazachstania africana CBS 2517]
Length = 630
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 108/279 (38%), Gaps = 48/279 (17%)
Query: 72 ANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPD 131
++++L FGSY + P +DID + H + +L R L++ L + +
Sbjct: 206 SDSELLVFGSYATDLYLPGSDIDCVVNSASGNKEHRSYLYELARFLKKKNLATSIEVIAR 265
Query: 132 ARVPVIKF--KFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDR 189
ARVP+IKF +GV +D+ + + + ++
Sbjct: 266 ARVPIIKFIEPESGVHIDISFERTN-------------------------GVEAAKLIRE 300
Query: 190 ILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYP-------N 242
L + P +R L +F RR + G LGG + LV L+P +
Sbjct: 301 WLDMTPGLREL--VLIVKQFLTARR-LNDVHTGGLGGFSIICLVYSFLHLHPKLRTDEID 357
Query: 243 ALPN--VLVSRFFKIFAHWKWPNPVMLCPIQ-YQA-MPHHVWDPRSNQRDRKHLMPIITP 298
L N VL+ FF+++ + V L I Y + MP W R + I P
Sbjct: 358 PLENLGVLLIDFFELYGKNFAYDEVALSFISGYPSYMPKSNWGSLPPSR-SSFTLAIQDP 416
Query: 299 SYPCTNSSYNVSSTTLRIMQEEFQRAKEL----CEEIEA 333
N S S +R +++ F A EL C E++A
Sbjct: 417 GDASNNLSR--GSFNVRDIKKSFSGAFELLTSKCFEMDA 453
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 30/48 (62%)
Query: 161 DLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLR 208
DLD Q S +EQTV SLNGCRVTD+ L LVPNI + + +R
Sbjct: 679 DLDIAQGSDTTECNEQTVDSLNGCRVTDQFLHLVPNISSLGYIMNGVR 726
>gi|374724400|gb|EHR76480.1| terminal uridylyltransferase [uncultured marine group II
euryarchaeote]
Length = 730
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 41/172 (23%)
Query: 73 NAKLFTFGSYRLGVAGPSTDIDALCVG-----PCYATRHDDFFGKLFRMLQETPLVEDLT 127
N +L FGS + G+ + D+D LC+ P A R ++ R+L++ + ED+
Sbjct: 83 NVELQQFGSSQSGLTLQAGDLD-LCLQFKGDIPAKALR------QVNRLLKQHDM-EDIV 134
Query: 128 PVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSL-LHNLDEQTVLSLNGCRV 186
+P A+VP+IKFK + + IP D+ S+ ++L LHN T L
Sbjct: 135 MLPRAKVPIIKFKD------------ERTKIPVDI-SINNTLALHN----TELLKRYSSC 177
Query: 187 TDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQ 238
+RI RS + ++ WA RR + + G W LL + Q
Sbjct: 178 DERI----------RSVILAVKHWANRRDVCDASTGTFSSYAWTLLAVQALQ 219
>gi|344252871|gb|EGW08975.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 384
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 319 EEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRL 378
EEF++ + +EI K W FE +FF K+Y+ + +A +W G VES++
Sbjct: 5 EEFKQGLAITDEILLSKAKWSKFFEAPNFFQKCKHYIVLLASAPTEKQRLEWVGLVESKI 64
Query: 379 RQLIHMIERD 388
R L+ +E++
Sbjct: 65 RILVGSLEKN 74
>gi|224141617|ref|XP_002324163.1| predicted protein [Populus trichocarpa]
gi|222865597|gb|EEF02728.1| predicted protein [Populus trichocarpa]
Length = 95
Score = 47.0 bits (110), Expect = 0.029, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 385 IERDMGGVLQCRLYPGDFSENSVKSSSQCHYFMGLGRKQGVS 426
IERD G+LQC YP ++ + S K C +FMGL RK+GV+
Sbjct: 6 IERDTNGMLQCHPYPNEYIDAS-KQCPHCAFFMGLQRKEGVT 46
>gi|119713752|gb|ABL97801.1| hypothetical protein ALOHA_HF1029C11.0028 [uncultured marine
bacterium HF10_29C11]
Length = 677
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 45/214 (21%)
Query: 46 LDGIVKDWIKRVTMDKGISDEEQIQE----------ANAKLFTFGSYRLGVAGPSTDIDA 95
LDG +K IK++ K S E NA + FGS ++ + D+D
Sbjct: 16 LDGDLKKVIKKIGDAKAKSRESLTNHLTSLIFRRFGKNAMVEAFGSSVTNLSIGTGDLD- 74
Query: 96 LCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFK--FNGVSVDLLYAQL 153
LC+ T K+ +L E + E++ +P AR+P++KFK +G+ VD+
Sbjct: 75 LCLSFKNKTPRK-VLRKISGVLHEEGM-ENIQLIPKARIPIVKFKDPRSGLDVDI----- 127
Query: 154 QFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKR 213
SL + L L DR+ LV +++WA R
Sbjct: 128 --------------SLDNRLAIYNSHLLKSYAQEDRLRRLV----------HMVKYWASR 163
Query: 214 RGIYSNAMGFLGGINWALLVARVCQLYPNAL-PN 246
RGI + G L W LL + QL AL PN
Sbjct: 164 RGINNAFDGSLSSYAWTLLTIQHAQLVQPALAPN 197
>gi|402220189|gb|EJU00261.1| hypothetical protein DACRYDRAFT_81189 [Dacryopinax sp. DJM-731 SS1]
Length = 753
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 31/186 (16%)
Query: 71 EANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLT--- 127
E +++L +FGS G A ++D+D C+ + R ++ M+ + L+E T
Sbjct: 75 EPDSRLLSFGSTANGFALRNSDMDLCCL--IDSDRLPPTASEMVVMVAD--LLERETKFQ 130
Query: 128 --PVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCR 185
P+P AR+P+IK L A Q L + ++ + L+L R
Sbjct: 131 VKPLPKARIPIIK---------LTLAPTQ---------GLPYGIACDIGFENRLALENTR 172
Query: 186 VTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVA--RVCQLYPNA 243
+ +L P R+ + L+ W+KRR I S +G L +AL+V V +P
Sbjct: 173 LLLSYATLDPT--RVRTMVLFLKLWSKRRKINSPYLGTLSSYGYALMVIFFLVHVKHPPV 230
Query: 244 LPNVLV 249
LPN+ V
Sbjct: 231 LPNLQV 236
>gi|71021859|ref|XP_761160.1| hypothetical protein UM05013.1 [Ustilago maydis 521]
gi|46100598|gb|EAK85831.1| hypothetical protein UM05013.1 [Ustilago maydis 521]
Length = 1174
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 72/174 (41%), Gaps = 42/174 (24%)
Query: 74 AKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDD--------------FFGKLFRMLQE 119
AKL FGS G A ++D+D LC C + DD G+L R +E
Sbjct: 391 AKLLAFGSMANGFALRNSDMD-LC---CLMGKRDDAQPTPQHTASELVEILGQLIR--EE 444
Query: 120 TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVL 179
T + P+P AR+P+IK + DL Y + ++ + L
Sbjct: 445 TDFT--VMPLPKARIPIIKIS-RSPTADLPY-----------------EIACDIGFENRL 484
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLV 233
+L R+ + P + R+ + L+ WAKRR + S MG L + L+V
Sbjct: 485 ALENTRLLLSYAMVDP--QRLRTLVLFLKVWAKRRKLNSPYMGTLSSYGYTLMV 536
>gi|343425896|emb|CBQ69429.1| related to caffeine-induced death protein 1 Cid1 [Sporisorium
reilianum SRZ2]
Length = 1181
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 40/188 (21%)
Query: 74 AKLFTFGSYRLGVAGPSTDIDALCV---GP--CYATRHD-----DFFGKLFRMLQETPLV 123
AKL FGS G A ++D+D C+ GP T+H + G+L R +ET
Sbjct: 377 AKLLAFGSMANGFALRNSDMDLCCLIGKGPDGQPTTQHTASELVEILGQLIR--EETDFT 434
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ P+P AR+P+IK + DL Y ++ + E+ +L+++ L +LS
Sbjct: 435 --VMPLPKARIPIIKIN-RSPTADLPY-EIACDIGFENRLALENTRL-------LLSY-- 481
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLV----ARVCQL 239
++V R R+ + L+ WAKRR + S MG L + L+V A V +
Sbjct: 482 --------AMVDPPR-LRTLVLFLKVWAKRRKLNSPYMGTLSSYGYTLMVLFFLAYVKK- 531
Query: 240 YPNALPNV 247
P LPN+
Sbjct: 532 -PAVLPNL 538
>gi|125526971|gb|EAY75085.1| hypothetical protein OsI_02979 [Oryza sativa Indica Group]
Length = 127
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 71 EANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFG 111
+A A + +FGSY LGV +DID L VGP Y R DFFG
Sbjct: 4 QATALVLSFGSYHLGVHSRGSDIDVLVVGPSYVDR--DFFG 42
>gi|125571299|gb|EAZ12814.1| hypothetical protein OsJ_02733 [Oryza sativa Japonica Group]
Length = 127
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 71 EANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFG 111
+A A + +FGSY LGV +DID L VGP Y R DFFG
Sbjct: 4 QATALVLSFGSYHLGVHSRGSDIDVLVVGPSYVDR--DFFG 42
>gi|256377138|ref|YP_003100798.1| endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM
43827]
gi|255921441|gb|ACU36952.1| Endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM
43827]
Length = 895
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 109/275 (39%), Gaps = 38/275 (13%)
Query: 59 MDKGISDEEQIQEANA--KLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRM 116
+D G EE ++ A ++ GS G A P D+D + V P G L
Sbjct: 559 VDFGERAEEVVRWARGVGEVHVVGSRATGCALPDADLDLVAVVPGEP-------GPL-PG 610
Query: 117 LQETPLVEDLTPVPDARVPVIKFKFN-GVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDE 175
L P D+ V AR P ++ G+ VD+ +V+ + +++ +
Sbjct: 611 LWVPPGALDVRVVNGARGPGVRAVVEPGLGVDI-------AVVGSGGVPVAEAVARRGET 663
Query: 176 QTVLSLNGCRVTDRILSLVP-NIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVA 234
++L+ + I + V + F + R ++ WA+ +G+ S G L G+ W++L A
Sbjct: 664 GGEVALSAVGDAEAIRAAVTGHEERFTALAREVKAWARVKGLDSAPFGGLPGVAWSVLAA 723
Query: 235 RVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQYQAMPHHVWDPRSNQRDRKHLMP 294
V + P ++ FF +A W W V L A P + M
Sbjct: 724 -VSAREADDDP---LTHFFGTWAAWDWRRAVSL---DGDAGPA------------RGAMT 764
Query: 295 IITPSYPCTNSSYNVSSTTLRIMQEEFQRAKELCE 329
++TPS P + + V ++ E RA E E
Sbjct: 765 VLTPSSPVRDCAGQVGEDFAELLTAELYRAWEFPE 799
>gi|388856182|emb|CCF50173.1| related to caffeine-induced death protein 1 Cid1 [Ustilago hordei]
Length = 1208
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 87/192 (45%), Gaps = 48/192 (25%)
Query: 74 AKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDD--------------FFGKLFRMLQE 119
AKL FGS G A ++D+D LC C + DD G+L R +E
Sbjct: 417 AKLLAFGSMANGFALRNSDMD-LC---CLMGKGDDGHPTTQHTASELVEILGQLIR--EE 470
Query: 120 TPLVEDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVL 179
T ++ P+P AR+P+IK + DL Y ++ + E+ +L+++ L +L
Sbjct: 471 TDF--NVMPLPKARIPIIKIN-RSPTADLPY-EIACDIGFENRLALENTRL-------LL 519
Query: 180 SLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLV----AR 235
S ++V R R+ + ++ WAKRR + S MG L + LLV A
Sbjct: 520 SY----------AMVDPPR-LRTLVLFVKVWAKRRKLNSPYMGTLSSYGYTLLVLFFLAH 568
Query: 236 VCQLYPNALPNV 247
V + P LPN+
Sbjct: 569 VKK--PAVLPNL 578
>gi|281211278|gb|EFA85443.1| Regulator of nonsense transcripts-like protein [Polysphondylium
pallidum PN500]
Length = 1412
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 45/181 (24%)
Query: 79 FGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPL---------VEDLTPV 129
+GS+ GV S+DID LC + D KLF +++ L +E + +
Sbjct: 1120 YGSFVNGVQTASSDID-LCFSVVGVST--DTNDKLFHLMKRVALRIKKNTSYQLEKI--I 1174
Query: 130 PDARVPVIKFKF--NGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVT 187
ARVP+IKFK N +S D+ + + +P + +SLL + E T++ +
Sbjct: 1175 RFARVPIIKFKDIENEISFDMCFN----NSMP-----VGNSLL--IKEYTMIDVRA---- 1219
Query: 188 DRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQ-LYPNALPN 246
++L L+ +++WA R+ I +MG L +W L+V Q + P LPN
Sbjct: 1220 -KVLMLL------------IKYWASRKDINDASMGTLSSYSWLLMVIFYLQSINPPVLPN 1266
Query: 247 V 247
+
Sbjct: 1267 L 1267
>gi|353238304|emb|CCA70254.1| related to caffeine-induced death protein 1 Cid1 [Piriformospora
indica DSM 11827]
Length = 714
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 26/167 (15%)
Query: 71 EANAKLFTFGSYRLGVAGPSTDIDALCV---GPCYATRHDDFFGKLFRMLQ-ETPLVEDL 126
E +++L +FGS G ++D+D CV P F + ++L+ ET +
Sbjct: 68 EPSSQLLSFGSTANGFELKNSDMDLCCVLDVRPETPPNASQFVLRAAQLLERETKFA--V 125
Query: 127 TPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRV 186
P+P+AR+P+IK LQ S S+ + ++ + L+L R+
Sbjct: 126 KPLPNARIPIIKLS------------LQPS------PSIPFGIACDIGFENRLALENTRL 167
Query: 187 TDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLV 233
++ P R+ + L+ WAKRR I S G L +ALLV
Sbjct: 168 LFTYAAIDPT--RVRTLVLFLKLWAKRRKINSPYHGTLSSYGYALLV 212
>gi|19114483|ref|NP_593571.1| poly(A) polymerase Cid16 (predicted) [Schizosaccharomyces pombe
972h-]
gi|3219960|sp|O13798.1|CID16_SCHPO RecName: Full=Caffeine-induced protein 16
gi|2330708|emb|CAB11210.1| poly(A) polymerase Cid16 (predicted) [Schizosaccharomyces pombe]
Length = 1202
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 78/180 (43%), Gaps = 36/180 (20%)
Query: 71 EANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVP 130
E K+ FGSYR G+ ++D+D + A ++ ++ +++ ++ P+
Sbjct: 919 EGPVKIACFGSYRTGLMTKNSDLDLVIYSSKEALL--PYYDRVKSIIKNE--FSNVMPIR 974
Query: 131 DARVPVIKF--KFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTD 188
AR+P+IKF ++N + DL + L +P +HN D L LN + +
Sbjct: 975 GARIPIIKFTGQYN-IHCDLSFDNL----LP----------IHNSD----LILNYSLIDE 1015
Query: 189 RILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPN-ALPNV 247
R+ ++ L +++WA R I F W ++V Q P LPN+
Sbjct: 1016 RV----------KTLLMLVKYWASNRLIDKTHHAFPSSYTWCIMVIFYLQQIPEPILPNL 1065
>gi|443894150|dbj|GAC71500.1| S-M checkpoint control protein CID1 and related
nucleotidyltransferases [Pseudozyma antarctica T-34]
Length = 1060
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 86/191 (45%), Gaps = 46/191 (24%)
Query: 74 AKLFTFGSYRLGVAGPSTDIDALCV---GPCY--ATRHD-----DFFGKLFRMLQETPLV 123
+KL FGS G A ++D+D C+ GP T+H + G+L R +ET
Sbjct: 367 SKLLAFGSMANGFALRNSDMDLCCLIGKGPDGQPTTQHTASELVEILGQLIR--EETDFT 424
Query: 124 EDLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNG 183
+ P+P AR+P+IK + DL Y ++ + E+ +L+++ L +LS
Sbjct: 425 --VMPLPKARIPIIKIN-RSPTTDLPY-EIACDIGFENRLALENTRL-------LLSY-- 471
Query: 184 CRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLY--- 240
++V R R+ + L+ W KRR + S MG L + LLV LY
Sbjct: 472 --------AMVDPTR-LRTLVLFLKVWTKRRKLNSPYMGTLSSYGYTLLV-----LYFLT 517
Query: 241 ----PNALPNV 247
P LPN+
Sbjct: 518 HVKKPAVLPNL 528
>gi|224128147|ref|XP_002329093.1| predicted protein [Populus trichocarpa]
gi|222869762|gb|EEF06893.1| predicted protein [Populus trichocarpa]
Length = 543
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 73 NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDA 132
N K+ FGS+R G+ P++DID + +G + L R L + + + + + A
Sbjct: 163 NCKVEVFGSFRTGLYLPTSDIDVVILGSGLKSPQIG-LNALSRALSQKGVAKKIQVIARA 221
Query: 133 RVPVIKF--KFNGVSVDLLY 150
RVP++KF K +GVS D+ +
Sbjct: 222 RVPIVKFVEKRSGVSFDISF 241
>gi|294939632|ref|XP_002782536.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239894204|gb|EER14331.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 157
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 337 TWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMG 390
TW L P+ FF ++ +L + I+A+ F ++KG VESR+R L+ +E G
Sbjct: 19 TWADLCAPFPFFQVYRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLETCCG 72
>gi|430813412|emb|CCJ29233.1| unnamed protein product [Pneumocystis jirovecii]
Length = 398
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 24/112 (21%)
Query: 32 SEEESLGRVEVLGRLDGIV-KDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPS 90
++EE R V+ R++ +V K W N +L FGS+ + P+
Sbjct: 100 TKEEHFVRELVVQRINALVQKHW------------------KNVQLCAFGSFDTMLYLPT 141
Query: 91 TDID--ALCVGP-CYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKF 139
+DID L +GP Y TR D KL R L+ + + +D+ + A VP+IKF
Sbjct: 142 SDIDLVILSLGPRIYETRKD--LHKLSRYLRCSNVAKDIQVITGASVPIIKF 191
>gi|195375624|ref|XP_002046600.1| GJ12395 [Drosophila virilis]
gi|194153758|gb|EDW68942.1| GJ12395 [Drosophila virilis]
Length = 726
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 66 EEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATR---HDDFFGKLFRMLQETPL 122
++Q+Q K++ FGS G+A +DID ++ H F K++ L+ T
Sbjct: 109 QKQLQ-GRVKVYPFGSLVTGLALKDSDIDLFLEQTDTSSNSMSHRQLFNKIYNFLRRTDC 167
Query: 123 VEDLTPVPDARVPVIKFK--FNGVSVDL 148
+D+ + ARVP+I+ K ++G+S+D+
Sbjct: 168 FQDVFAIRHARVPIIRCKHVYSGLSLDI 195
>gi|55296010|dbj|BAD68901.1| hypothetical protein [Oryza sativa Japonica Group]
gi|55296026|dbj|BAD69437.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 207
Score = 43.9 bits (102), Expect = 0.29, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 71 EANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFG 111
+A A + +FGSY LGV +DID L VGP Y R DFFG
Sbjct: 4 QATALVLSFGSYHLGVHSRGSDIDVLVVGPSYVDR--DFFG 42
>gi|328847777|gb|EGF97110.1| hypothetical protein MELLADRAFT_87937 [Melampsora larici-populina
98AG31]
Length = 105
Score = 43.5 bits (101), Expect = 0.30, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 4 ISTSAPTVLDVISTKELEKILVDEKLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGI 63
IS + PT + ST L L F S E++ R VLGRL+ +VK+++ +V+ G+
Sbjct: 20 ISINGPTCPEGFSTTVLMDELKARCTFESPEDARAREFVLGRLNLLVKEFVIKVSPALGM 79
Query: 64 SDEEQIQEANAKLFTFGSYR 83
SD +E +FTFG ++
Sbjct: 80 SDHVA-RETGGNIFTFGQFK 98
>gi|195125549|ref|XP_002007240.1| GI12491 [Drosophila mojavensis]
gi|193918849|gb|EDW17716.1| GI12491 [Drosophila mojavensis]
Length = 665
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 66 EEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVG---PCYATRHDDFFGKLFRMLQETPL 122
++Q+Q K++ FGS G+A +DID A H F K++ L+ +
Sbjct: 109 QKQLQ-GRVKVYPFGSLVTGLALKDSDIDLFLEQTDVSSNAISHRQLFNKIYNFLRRSEC 167
Query: 123 VEDLTPVPDARVPVIKFK--FNGVSVDL 148
+D+ + ARVP+I+ K ++G+S+D+
Sbjct: 168 FQDVFAIRHARVPIIRCKHVYSGLSLDI 195
>gi|256271045|gb|EEU06149.1| Pap2p [Saccharomyces cerevisiae JAY291]
Length = 584
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 74/196 (37%), Gaps = 39/196 (19%)
Query: 73 NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDA 132
+A L FGSY + P +DID + + L L++ L ++ V A
Sbjct: 217 DADLHVFGSYSTDLYLPGSDIDCVVTSKLGGKESRNNLYSLASHLKKKKLATEVEVVAKA 276
Query: 133 RVPVIKF--KFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRI 190
RVP+IKF +G+ +D+ + E+T NG I
Sbjct: 277 RVPIIKFVEPHSGIHIDVSF------------------------ERT----NGIEAAKLI 308
Query: 191 LSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPN---- 246
+ + R + ++ + R + + G LGG + LV ++P + N
Sbjct: 309 REWLDDTPGLRELVLIVKQFLHARRLNNVHTGGLGGFSIICLVFSFLHMHPRIITNEIDP 368
Query: 247 -----VLVSRFFKIFA 257
VL+ FF+++
Sbjct: 369 KDNLGVLLIEFFELYG 384
>gi|359493669|ref|XP_002282332.2| PREDICTED: PAP-associated domain-containing protein 5-like [Vitis
vinifera]
gi|302143015|emb|CBI20310.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 73 NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDA 132
N K+ FGS++ G+ P++DID + +G T + L R L + + + + + A
Sbjct: 143 NCKVEVFGSFKTGLYLPTSDIDVVILGSDIKTPQIGLYA-LSRALSQKGIAKKIQVIAKA 201
Query: 133 RVPVIKF--KFNGVSVDLLY 150
RVP+IKF K + V+ D+ +
Sbjct: 202 RVPIIKFIEKRSSVAFDISF 221
>gi|6324457|ref|NP_014526.1| non-canonical poly(A) polymerase PAP2 [Saccharomyces cerevisiae
S288c]
gi|1717744|sp|P53632.1|PAP2_YEAST RecName: Full=Poly(A) RNA polymerase protein 2; AltName: Full=DNA
polymerase kappa; AltName: Full=DNA polymerase sigma;
AltName: Full=Topoisomerase 1-related protein TRF4
gi|663237|emb|CAA88145.1| ORF [Saccharomyces cerevisiae]
gi|950226|gb|AAC49091.1| Trf4p [Saccharomyces cerevisiae]
gi|1419987|emb|CAA99134.1| TRF4 [Saccharomyces cerevisiae]
gi|51830518|gb|AAU09782.1| YOL115W [Saccharomyces cerevisiae]
gi|285814775|tpg|DAA10668.1| TPA: non-canonical poly(A) polymerase PAP2 [Saccharomyces
cerevisiae S288c]
gi|392296670|gb|EIW07772.1| Pap2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 584
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 74/196 (37%), Gaps = 39/196 (19%)
Query: 73 NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDA 132
+A L FGSY + P +DID + + L L++ L ++ V A
Sbjct: 217 DADLHVFGSYSTDLYLPGSDIDCVVTSELGGKESRNNLYSLASHLKKKNLATEVEVVAKA 276
Query: 133 RVPVIKF--KFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRI 190
RVP+IKF +G+ +D+ + E+T NG I
Sbjct: 277 RVPIIKFVEPHSGIHIDVSF------------------------ERT----NGIEAAKLI 308
Query: 191 LSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPN---- 246
+ + R + ++ + R + + G LGG + LV ++P + N
Sbjct: 309 REWLDDTPGLRELVLIVKQFLHARRLNNVHTGGLGGFSIICLVFSFLHMHPRIITNEIDP 368
Query: 247 -----VLVSRFFKIFA 257
VL+ FF+++
Sbjct: 369 KDNLGVLLIEFFELYG 384
>gi|349581056|dbj|GAA26214.1| K7_Pap2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 584
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 74/196 (37%), Gaps = 39/196 (19%)
Query: 73 NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDA 132
+A L FGSY + P +DID + + L L++ L ++ V A
Sbjct: 217 DADLHVFGSYSTDLYLPGSDIDCVVTSELGGKESRNNLYSLASHLKKKNLATEVEVVAKA 276
Query: 133 RVPVIKF--KFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRI 190
RVP+IKF +G+ +D+ + E+T NG I
Sbjct: 277 RVPIIKFVEPHSGIHIDVSF------------------------ERT----NGIEAAKLI 308
Query: 191 LSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPN---- 246
+ + R + ++ + R + + G LGG + LV ++P + N
Sbjct: 309 REWLDDTPGLRELVLIVKQFLHARRLNNVHTGGLGGFSIICLVFSFLHMHPRIITNEIDP 368
Query: 247 -----VLVSRFFKIFA 257
VL+ FF+++
Sbjct: 369 KDNLGVLLIEFFELYG 384
>gi|190407236|gb|EDV10503.1| DNA polymerase sigma [Saccharomyces cerevisiae RM11-1a]
gi|259149371|emb|CAY86175.1| Pap2p [Saccharomyces cerevisiae EC1118]
Length = 584
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 74/196 (37%), Gaps = 39/196 (19%)
Query: 73 NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDA 132
+A L FGSY + P +DID + + L L++ L ++ V A
Sbjct: 217 DADLHVFGSYSTDLYLPGSDIDCVVTSKLGGKESRNNLYSLASHLKKKNLATEVEVVAKA 276
Query: 133 RVPVIKF--KFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRI 190
RVP+IKF +G+ +D+ + E+T NG I
Sbjct: 277 RVPIIKFVEPHSGIHIDVSF------------------------ERT----NGIEAAKLI 308
Query: 191 LSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPN---- 246
+ + R + ++ + R + + G LGG + LV ++P + N
Sbjct: 309 REWLDDTPGLRELVLIVKQFLHARRLNNVHTGGLGGFSIICLVFSFLHMHPRIITNEIDP 368
Query: 247 -----VLVSRFFKIFA 257
VL+ FF+++
Sbjct: 369 KDNLGVLLIEFFELYG 384
>gi|151945519|gb|EDN63760.1| DNA polymerase sigma [Saccharomyces cerevisiae YJM789]
Length = 584
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 74/196 (37%), Gaps = 39/196 (19%)
Query: 73 NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDA 132
+A L FGSY + P +DID + + L L++ L ++ V A
Sbjct: 217 DADLHVFGSYSTDLYLPGSDIDCVVTSKLGGKESRNNLYSLASHLKKKNLATEVEVVAKA 276
Query: 133 RVPVIKF--KFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRI 190
RVP+IKF +G+ +D+ + E+T NG I
Sbjct: 277 RVPIIKFVEPHSGIHIDVSF------------------------ERT----NGIEAAKLI 308
Query: 191 LSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALPN---- 246
+ + R + ++ + R + + G LGG + LV ++P + N
Sbjct: 309 REWLDDTPGLRELVLIVKQFLHARRLNNVHTGGLGGFSIICLVFSFLHMHPRIITNEIDP 368
Query: 247 -----VLVSRFFKIFA 257
VL+ FF+++
Sbjct: 369 KDNLGVLLIEFFELYG 384
>gi|328860813|gb|EGG09918.1| hypothetical protein MELLADRAFT_115680 [Melampsora larici-populina
98AG31]
Length = 987
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 94/226 (41%), Gaps = 35/226 (15%)
Query: 69 IQEANAKLFTFGSYRLGVAGPSTDIDALCVGP-CYATRHDDFFGKLFRMLQETPLVEDLT 127
+Q +A + FGS+ + P DID + + +L +L+E + +D+
Sbjct: 268 MQWPDADVVPFGSFGTKLYLPGGDIDLVILSTRMMKDAKSKILYRLAPLLREQNIGQDVV 327
Query: 128 PVPDARVPVIKFK--FNGVSVDLLYAQLQFSVIPEDLDSLQDSLLH-------------- 171
+ A+VP+IKFK F VD+ Q V E ++ L D + +
Sbjct: 328 VIAKAKVPIIKFKTIFGNFQVDISINQSNGLVALEKVNELLDDVKYLSKDLRAEQRHHQH 387
Query: 172 ------NLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLG 225
+E+T L ++ + I +V + + + ++ K+RG+ G LG
Sbjct: 388 SRNQSKRRNEETNLEMD--EEEEAISKVVEELGAAKCMILVIKSVLKQRGMNEVYSGGLG 445
Query: 226 GINWALLVARVCQLYP-----NALPN----VLVSRFFKIFA-HWKW 261
+ LV QL+P + PN VL+ FF+++ H+ +
Sbjct: 446 SYSIICLVISFLQLHPKIQRGDIDPNKNLGVLLLEFFELYGKHYNF 491
>gi|47496915|dbj|BAD19964.1| hypothetical protein [Oryza sativa Japonica Group]
gi|47497725|dbj|BAD19790.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 266
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 172 NLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLR 208
LD T SLNG RV D IL LVP+ F +TLRC++
Sbjct: 57 GLDLATARSLNGVRVADEILRLVPDADVFHTTLRCVK 93
>gi|62733224|gb|AAX95341.1| hypothetical protein [Oryza sativa Japonica Group]
gi|77552690|gb|ABA95487.1| expressed protein [Oryza sativa Japonica Group]
Length = 347
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 177 TVLSLNGCRVTDRILSLVPNIRNFRSTLRCLR 208
TV SLNG RV D IL LVP+ F +TLRC++
Sbjct: 158 TVRSLNGVRVADEILRLVPDAATFHTTLRCVK 189
>gi|390599004|gb|EIN08401.1| hypothetical protein PUNSTDRAFT_144010 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1075
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 25/169 (14%)
Query: 172 NLDEQTVLSLNGCRV--------TDRILSLVPNIRNFRSTLRCLRFWAKRRGI---YSNA 220
NL T L+ R+ D +++L ++R+ + ++ ++ + + Y+ A
Sbjct: 634 NLALNTFFELSKARIREWNTICSADEMIALKRHVRD--AAVQMMKLETRNVSVDLQYAPA 691
Query: 221 MGFLG-GINWALLVARVCQLYPNAL----PNVLVSRFFKIFAHWKWPNPVMLCPIQYQAM 275
LG G + +L+AR+ P+ L+ FF +A W W + + A+
Sbjct: 692 ARVLGSGTHLIILLARIVTHDPDNARCKSGYALLKTFFDEYAEWSWEDNDV-------AI 744
Query: 276 PHHVWDPRSNQRDRKHLMPIITPSYPCTNSSYNVSSTTLRIMQEEFQRA 324
PH + +R + M I++ P N + + S T+R++Q+EF R+
Sbjct: 745 PHEGPEMTVYKRTAREPMAILSSQRPVINVATSASVPTVRVVQQEFYRS 793
>gi|299473006|emb|CBN77407.1| nucleotidyltransferase family protein [Ectocarpus siliculosus]
Length = 434
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 49 IVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDD 108
I +IKRV E+ + A++ FGS G+ PS+DID++ +G +
Sbjct: 288 IAITYIKRVV--------EETLGSEARVEIFGSQLTGLVLPSSDIDSVVLGGPRGSLGS- 338
Query: 109 FFGKLFRMLQETPLVEDLTPVPDARVPVIKFKF--NGVSVDLLYAQ 152
G Q V ++T + ARVP++KF +GV VD+ + Q
Sbjct: 339 -LGAAMYRRQNKGEVREVTVIKSARVPLVKFVHVGSGVQVDVCFDQ 383
>gi|449498731|ref|XP_004160618.1| PREDICTED: uncharacterized protein LOC101229001 [Cucumis sativus]
Length = 384
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 24/137 (17%)
Query: 19 ELEKILVD--EKLFASEEESLGRVEVLGRLDGIVKD-WIKRVTMDKGISDEEQIQEANAK 75
+L K +VD E L +EEE + R + R+ +VK W + K
Sbjct: 196 QLHKEIVDFCEFLSPTEEERVARDSAVERVFSVVKHIW------------------PHCK 237
Query: 76 LFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVP 135
+ FGS++ G+ P++DID + +G + L R L + + + + + ARVP
Sbjct: 238 VEVFGSFQTGLYLPTSDIDVVILG-SGIPKPQLGLQALSRALSQKGIAKKIQVIGKARVP 296
Query: 136 VIKF--KFNGVSVDLLY 150
+IKF K +G+S D+ +
Sbjct: 297 IIKFIEKQSGISFDISF 313
>gi|449446931|ref|XP_004141224.1| PREDICTED: PAP-associated domain-containing protein 5-like [Cucumis
sativus]
Length = 544
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 101/251 (40%), Gaps = 58/251 (23%)
Query: 19 ELEKILVD--EKLFASEEESLGRVEVLGRLDGIVKD-WIKRVTMDKGISDEEQIQEANAK 75
+L K +VD E L +EEE + R + R+ +VK W + K
Sbjct: 125 QLHKEIVDFCEFLSPTEEERVARDSAVERVFSVVKHIW------------------PHCK 166
Query: 76 LFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVP 135
+ FGS++ G+ P++DID + +G + L R L + + + + + ARVP
Sbjct: 167 VEVFGSFQTGLYLPTSDIDVVILGSGIP-KPQLGLQALSRALSQKGIAKKIQVIGKARVP 225
Query: 136 VIKF--KFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSL 193
+IKF K +G+S D+ + D Q NG + D I
Sbjct: 226 IIKFIEKQSGISFDI-----------------------SFDVQ-----NGPKAADFIKGA 257
Query: 194 VPNIRNFRSTLRCLRFWAKRR---GIYSNAMGFLGGINWALLVARVCQLYPNALPN---V 247
V R L+ + ++R +YS +G + + + + + P++L + V
Sbjct: 258 VSKWPPLRPLCLILKVFLQQRELNEVYSGGLGSYALLTMLMAMLQSINVPPSSLEHNLGV 317
Query: 248 LVSRFFKIFAH 258
L+ FF +
Sbjct: 318 LLVHFFDFYGR 328
>gi|46806537|dbj|BAD17650.1| unknown protein [Oryza sativa Japonica Group]
gi|125581350|gb|EAZ22281.1| hypothetical protein OsJ_05937 [Oryza sativa Japonica Group]
Length = 169
Score = 42.4 bits (98), Expect = 0.74, Method: Composition-based stats.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 177 TVLSLNGCRVTDRILSLVPNIRNFRSTLRCLR 208
TV SLNG RV D+IL LVP+ F +TLRC++
Sbjct: 42 TVRSLNGVRVADKILRLVPDAAAFHTTLRCVK 73
>gi|297725915|ref|NP_001175321.1| Os07g0658500 [Oryza sativa Japonica Group]
gi|255678036|dbj|BAH94049.1| Os07g0658500 [Oryza sativa Japonica Group]
Length = 319
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 177 TVLSLNGCRVTDRILSLVPNIRNFRSTLRCLR 208
TV +LNG RV D IL LVP+ F +TLRC++
Sbjct: 135 TVRNLNGVRVADEILRLVPDAAAFHTTLRCVK 166
>gi|218186213|gb|EEC68640.1| hypothetical protein OsI_37050 [Oryza sativa Indica Group]
Length = 248
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 177 TVLSLNGCRVTDRILSLVPNIRNFRSTLRCLR 208
TV SLNG RV D IL LVP+ F +TLRC++
Sbjct: 111 TVRSLNGVRVADEILWLVPDAAAFHTTLRCVK 142
>gi|46805211|dbj|BAD17691.1| unknown protein [Oryza sativa Japonica Group]
Length = 285
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 177 TVLSLNGCRVTDRILSLVPNIRNFRSTLRCLR 208
TV SLNG RV D IL LVP+ F +TLRC++
Sbjct: 32 TVRSLNGVRVADEILRLVPDAAAFHTTLRCVK 63
>gi|145525609|ref|XP_001448621.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416176|emb|CAK81224.1| unnamed protein product [Paramecium tetraurelia]
Length = 364
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 41/191 (21%)
Query: 32 SEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPST 91
S++E RV R++ ++D I+ E QI+ +FGS++ + P+
Sbjct: 78 SDQEHKRRVTAYLRVEKYLQD----------IAPEAQIE-------SFGSFKTRMYLPNA 120
Query: 92 DIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLYA 151
DID + + T+ F RM+++T E++ + +A+VP+IKF V V+ +
Sbjct: 121 DIDIVMIETS-CTQKQLFKKVAARMMKQTNKFENVNLIANAKVPIIKF----VEVE---S 172
Query: 152 QLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFWA 211
Q F + LD L+ ++ L P ++ TL+C+
Sbjct: 173 QYHFDLSFNQLDGLKQ----------------IEELEKAFELYPELKFLLMTLKCVLRQR 216
Query: 212 KRRGIYSNAMG 222
YS +G
Sbjct: 217 DLNETYSGGVG 227
>gi|194748723|ref|XP_001956794.1| GF10110 [Drosophila ananassae]
gi|190624076|gb|EDV39600.1| GF10110 [Drosophila ananassae]
Length = 665
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 19/139 (13%)
Query: 28 KLFASEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQ--------------EAN 73
KLF S + R E+ L+ R +D SD +++ +
Sbjct: 67 KLFTSAQTQSERSELQEVLEQSATGGHLRTVLDFYASDLRKLESCFGHVRNCIEKEMKGR 126
Query: 74 AKLFTFGSYRLGVAGPSTDIDALCVGPC--YATRHDDFFGKLFRMLQETPLVEDLTPVPD 131
K+F FGS G++ +DID L + PC H + ++ L+ + D+ +
Sbjct: 127 VKVFPFGSLVTGLSLKESDID-LYLQPCDDQNMMHKQLYNRVSHFLRRSKCFTDIFTIRH 185
Query: 132 ARVPVIKFK--FNGVSVDL 148
ARVP+I+ K G+S+D+
Sbjct: 186 ARVPIIRCKHTLTGLSIDI 204
>gi|428181303|gb|EKX50167.1| hypothetical protein GUITHDRAFT_103980 [Guillardia theta CCMP2712]
Length = 760
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 25/157 (15%)
Query: 89 PSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDL 148
P +I G R F L ++L ++ ++ P+P+ARVP+IKF+
Sbjct: 452 PEEEIQRNAKGQRKTARFRYFLIGLAKLLTRQGMM-NVEPLPNARVPIIKFQAR------ 504
Query: 149 LYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLR 208
D L S +L VL+ C T+ + + R + C++
Sbjct: 505 --------------DGLDFSFDCDLCVNNVLA---CINTNLLFTYTMLDARVRPLIMCIK 547
Query: 209 FWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALP 245
W K+R I++ G+L ++L+V + Q Y LP
Sbjct: 548 HWVKQRQIHNAFRGYLSSYTYSLMVIQYLQ-YERILP 583
>gi|429327416|gb|AFZ79176.1| nucleotidyltransferase domain containing protein [Babesia equi]
Length = 520
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 12/116 (10%)
Query: 40 VEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEA---NAKLFTFGSYRLGVAGPSTDIDAL 96
+E+L LD + +R+ ++ + E + A NAK+ FGSY G++ P DID
Sbjct: 134 IELLKLLDWLAPSKEERIAKEQVLMQLEIVVNALFPNAKMRAFGSYATGLSLPGGDIDVF 193
Query: 97 --CVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVIKF--KFNGVSVDL 148
C GP L L LV + + VPV+K K GV +D+
Sbjct: 194 IECEGPELC-----ILNMLVYALNRLGLVHSFECIYNTNVPVVKLVDKRTGVRLDI 244
>gi|328874806|gb|EGG23171.1| hypothetical protein DFA_05303 [Dictyostelium fasciculatum]
Length = 473
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 212 KRRGIYSNAMGFLGGINWALLVARVCQLYPNALPNVLVSRFFKIFAHWKWPNPVMLCPIQ 271
K I SN + FLGG A LV+RV L +V+ F K + H W +
Sbjct: 149 KLHAIDSNELFFLGGQIIASLVSRVMTANDPNLASVICQEFLKQYCHRAWWEVRI--DDN 206
Query: 272 YQAMPHHVWDPRSNQRDRKHLMPIITPSYPCTNS 305
+ W S RK+L PI+T S+P TN+
Sbjct: 207 FTEQEARTWSAESLDLLRKYLYPILT-SHPLTNN 239
>gi|356530683|ref|XP_003533910.1| PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max]
Length = 134
Score = 40.4 bits (93), Expect = 2.6, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 191 LSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALL 232
LS P+ F +TL CL+FWAK RGIYSN FL + W L
Sbjct: 98 LSYFPH---FLTTLCCLKFWAKGRGIYSNV--FLVVLTWHFL 134
>gi|147800856|emb|CAN64475.1| hypothetical protein VITISV_017481 [Vitis vinifera]
Length = 493
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 78 TFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDARVPVI 137
FGS++ G+ P++DID + +G T + L R L + + + + + ARVP+I
Sbjct: 138 VFGSFKTGLYLPTSDIDVVILGSDIKTPQIGLYA-LSRALSQKGIAKKIQVIAKARVPII 196
Query: 138 KF--KFNGVSVDLLY 150
KF K + V+ D+ +
Sbjct: 197 KFVEKRSSVAFDISF 211
>gi|344256545|gb|EGW12649.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 349
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 87/197 (44%), Gaps = 20/197 (10%)
Query: 316 IMQEEFQRAKELCEEIEAGKRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVE 375
+M EE ++ + +EI K W LFE +FF +K+Y+ + +A + VE
Sbjct: 2 VMVEELKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAHTEKQRLECVDLVE 61
Query: 376 SRLRQLIHMIERDMGGVLQCRLYPGDF---SENSVKSSSQCHYFMGLGRKQGVSPQDGEK 432
S++ L+ +E++ L + P F +N K + + +GL K+ ++ E
Sbjct: 62 SKICILVGSLEKNEFIKL-AHVNPQSFPAPKDNPDKEEFRTMWVIGLVFKKT---ENSEN 117
Query: 433 FDMRLTVEEFKSHVVWMYSS------WKQGMQIHVSHLRCQDIPDFVFPGGVRPPKSLNE 486
+ LT + +S +YS ++ M+I H++ + + + P L +
Sbjct: 118 LSVDLTY-DIQSFTDTVYSQAINSKMFELDMKIAAMHVKRKQLHQLL------PSHMLQK 170
Query: 487 KKRKRIEVIESTKLKKS 503
+K+ E ++ T L S
Sbjct: 171 RKKHSTEGVKLTALNDS 187
>gi|428182086|gb|EKX50948.1| hypothetical protein GUITHDRAFT_66394 [Guillardia theta CCMP2712]
Length = 242
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 24/121 (19%)
Query: 125 DLTPVPDARVPVIKFKFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGC 184
++ +P ARVP+IKFK AQ + LD + D +L VL+ C
Sbjct: 3 NVEALPYARVPIIKFK----------AQ-------DGLDFVFDC---DLSVNNVLA---C 39
Query: 185 RVTDRILSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNAL 244
TD + + + R + C++ W K+R I+ G+L + L+V + Q Y L
Sbjct: 40 INTDLLFTYTMLDKRVRPLIMCIKHWVKQRRIHKTFRGYLSSYTYTLMVIQYLQ-YERVL 98
Query: 245 P 245
P
Sbjct: 99 P 99
>gi|67584259|ref|XP_665040.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54655388|gb|EAL34810.1| hypothetical protein Chro.40112 [Cryptosporidium hominis]
Length = 315
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 30/134 (22%)
Query: 361 AKNAGDFRQWKGWVESRLRQLIHMIERDMGGVLQCRLYPGDFSENSVKSS----SQCHYF 416
+ N F +W GW+ES+LR L+ +E G LQ R +P E +Q Y
Sbjct: 3 SNNXQAFHKWIGWIESKLRFLVRKLETFKG--LQVRPWPKAIQEQDEAKDGFIFAQSMYI 60
Query: 417 ------------------MGLGRKQGVSPQDGEKFDMRLTVEEFKSHVV-WM-YSSWKQG 456
G+ G +P D+R + +F ++ W ++K
Sbjct: 61 GLVLNNSNSNNGSSSTGVTGVSNSSGTAPV----VDLRGAILDFVGFIMNWSEVENYKDS 116
Query: 457 MQIHVSHLRCQDIP 470
+ + V HLR +D+P
Sbjct: 117 IDLKVRHLRAKDLP 130
>gi|401623740|gb|EJS41828.1| trf4p [Saccharomyces arboricola H-6]
Length = 573
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 39/196 (19%)
Query: 73 NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDA 132
+A L FGSY + P +DID + + L L++ L ++ V A
Sbjct: 209 DADLHVFGSYSTDLYLPGSDIDCVITSELGGKESRNNLFSLASHLKKKNLATEIEVVAKA 268
Query: 133 RVPVIKF--KFNGVSVDLLYAQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRI 190
RVP+IKF +G+ +D+ + + L ++
Sbjct: 269 RVPIIKFVEPNSGIHIDVSFERTN-------------------------GLEAAKLIREW 303
Query: 191 LSLVPNIRNFRSTLRCLRFWAKRRGIYSNAMGFLGGINWALLVARVCQLYPNALP----- 245
L+ P +R L +F RR + + G LGG + LV ++P +
Sbjct: 304 LNDTPGLREL--VLIVKQFLHSRR-LNNVHTGGLGGFSIICLVFSFLHMHPRIITKEIEA 360
Query: 246 ----NVLVSRFFKIFA 257
VL+ FF+++
Sbjct: 361 KDNLGVLLIEFFELYG 376
>gi|145546801|ref|XP_001459083.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426906|emb|CAK91686.1| unnamed protein product [Paramecium tetraurelia]
Length = 364
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 81/192 (42%), Gaps = 43/192 (22%)
Query: 32 SEEESLGRVEVLGRLDGIVKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPST 91
S++E RV R++ ++D I+ E QI+ +FGS++ + P+
Sbjct: 78 SDQEHKRRVTAYMRVEKYLQD----------IAPEAQIE-------SFGSFKTRMYLPNA 120
Query: 92 DIDALCVGPCYATRHDDFFGKLF-RMLQETPLVEDLTPVPDARVPVIKFKFNGVSVDLLY 150
DID + + + F K+ +M+++T E++ + +A+VP+IKF + V+
Sbjct: 121 DIDMVMIETSCTQKQ--LFKKVAAKMMKQTNKFENVNLIANAKVPIIKF----IEVE--- 171
Query: 151 AQLQFSVIPEDLDSLQDSLLHNLDEQTVLSLNGCRVTDRILSLVPNIRNFRSTLRCLRFW 210
+Q F + LD L+ ++ + P ++ TL+C+
Sbjct: 172 SQYHFDLSFNQLDGLKQ----------------IEELEKAFEIYPELKFLLMTLKCVLRQ 215
Query: 211 AKRRGIYSNAMG 222
YS +G
Sbjct: 216 RDLNETYSGGVG 227
>gi|426199822|gb|EKV49746.1| hypothetical protein AGABI2DRAFT_63272 [Agaricus bisporus var.
bisporus H97]
Length = 481
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 50 VKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYA-TRHDD 108
++D I+ +T+ + IS + +K+F FGSY + PS DID + V A +
Sbjct: 159 IEDEIRELTV-QMISRAITTAFSGSKVFPFGSYETKLYLPSGDIDLVIVSDSMAYSNKSS 217
Query: 109 FFGKLFRMLQETPLVEDLTPVPDARVPVIKF 139
L +L+ + ++T + A+VP++KF
Sbjct: 218 VLHSLASVLRRAGIASNVTVIAKAKVPIVKF 248
>gi|358342231|dbj|GAA49742.1| poly(A) polymerase [Clonorchis sinensis]
Length = 373
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 335 KRTWITLFEPYHFFGSFKNYLQIHIAAKNAGDFRQWKGWVESRLRQLIHMIERDMG---G 391
K+ W LFEP FF +++Y+ + + F + G VESRLR L+ E +
Sbjct: 43 KQPWSNLFEPAFFF-RYRHYVVVIVTGSAKRSFLELCGLVESRLRVLVSNFELNRYVKIA 101
Query: 392 VLQCRLY 398
+ CR Y
Sbjct: 102 HVNCRSY 108
>gi|255566595|ref|XP_002524282.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223536473|gb|EEF38121.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 526
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 73 NAKLFTFGSYRLGVAGPSTDIDALCVGPCYATRHDDFFGKLFRMLQETPLVEDLTPVPDA 132
N K+ FGSY+ G+ P++DID + L R L + + + + + A
Sbjct: 163 NCKVEVFGSYKTGLYLPTSDIDVVIFRSGIKNPQIG-LQALSRALSQKGIAKKIQVIAKA 221
Query: 133 RVPVIKF--KFNGVSVDLLY 150
RVP++KF K +GVS D+ +
Sbjct: 222 RVPIVKFVEKRSGVSFDISF 241
>gi|409081996|gb|EKM82354.1| hypothetical protein AGABI1DRAFT_52475, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 559
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 50 VKDWIKRVTMDKGISDEEQIQEANAKLFTFGSYRLGVAGPSTDIDALCVGPCYA-TRHDD 108
++D I+ +T+ + IS + +K+F FGSY + PS DID + V A +
Sbjct: 158 IEDEIRELTV-QMISRAITTAFSGSKVFPFGSYETKLYLPSGDIDLVIVSDSMAYSNKSS 216
Query: 109 FFGKLFRMLQETPLVEDLTPVPDARVPVIKF 139
L +L+ + ++T + A+VP++KF
Sbjct: 217 VLHSLASVLRRAGIASNVTVIAKAKVPIVKF 247
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.133 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,864,018,957
Number of Sequences: 23463169
Number of extensions: 411121058
Number of successful extensions: 1319624
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 711
Number of HSP's that attempted gapping in prelim test: 1304197
Number of HSP's gapped (non-prelim): 13652
length of query: 636
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 487
effective length of database: 8,863,183,186
effective search space: 4316370211582
effective search space used: 4316370211582
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)