BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006659
(636 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ZJ3|A Chain A, Isomerase Domain Of Human Glucose:fructose-6-Phosphate
Amidotransferase
pdb|2ZJ4|A Chain A, Isomerase Domain Of Human Glucose:fructose-6-Phosphate
Amidotransferase
Length = 375
Score = 446 bits (1148), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/374 (57%), Positives = 285/374 (76%), Gaps = 6/374 (1%)
Query: 263 EQINKGNYEHYMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLKTIRRSRRI 322
+QI KGN+ +MQKEI EQPES+ TMRGR+ + +V LGGLKDH+K I+R RR+
Sbjct: 8 QQIMKGNFSSFMQKEIFEQPESVVNTMRGRV----NFDDYTVNLGGLKDHIKEIQRCRRL 63
Query: 323 VFIGCGTSYNAALAARPILEELSDLPVTMEIASDLVDRQAPIYREDTAVFVSQSGETADT 382
+ I CGTSY+A +A R +LEEL++LPV +E+ASD +DR P++R+D F+SQSGETADT
Sbjct: 64 ILIACGTSYHAGVATRQVLEELTELPVMVELASDFLDRNTPVFRDDVCFFLSQSGETADT 123
Query: 383 LQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVMAMLA 442
L L Y E GAL VGITNTVGS+I+R+T CGVHINAG EIGVASTKAYTSQ V + M A
Sbjct: 124 LMGLRYCKERGALTVGITNTVGSSISRETDCGVHINAGPEIGVASTKAYTSQFVSLVMFA 183
Query: 443 LAIGGDTISTQARREAIIDGLCDLPNKVREVLKLDQEMKVLAKQLIAEQSLLVFGRGYNY 502
L + D IS Q RR+ I+ GL LP+ ++EVL +D E++ LA +L ++S+L+ GRGY+Y
Sbjct: 184 LMMCDDRISMQERRKEIMLGLKRLPDLIKEVLSMDDEIQKLATELYHQKSVLIMGRGYHY 243
Query: 503 ATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQSVIQQL 562
AT LEGALK+KE+ MHSEGILAGE+KHGPLALVD+ +P+++I RD ++K Q+ +QQ+
Sbjct: 244 ATCLEGALKIKEITYMHSEGILAGELKHGPLALVDKLMPVIMIIMRDHTYAKCQNALQQV 303
Query: 563 HARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVEDCLQPVINIVPLQLLAYHLTVLRGYN 622
AR+GR +V+C K D +I + R I+VP DCLQ +++++PLQLLA+HL VLRGY+
Sbjct: 304 VARQGRPVVICDKEDTETI--KNTKRTIKVPHSVDCLQGILSVIPLQLLAFHLAVLRGYD 361
Query: 623 VDQPRNLAKSVTTQ 636
VD PRNLAKSVT +
Sbjct: 362 VDFPRNLAKSVTVE 375
>pdb|2V4M|A Chain A, The Isomerase Domain Of Human Glutamine-Fructose-6-
Phosphate Transaminase 1 (Gfpt1) In Complex With
Fructose 6-Phosphate
pdb|2V4M|B Chain B, The Isomerase Domain Of Human Glutamine-Fructose-6-
Phosphate Transaminase 1 (Gfpt1) In Complex With
Fructose 6-Phosphate
pdb|2V4M|C Chain C, The Isomerase Domain Of Human Glutamine-Fructose-6-
Phosphate Transaminase 1 (Gfpt1) In Complex With
Fructose 6-Phosphate
pdb|2V4M|D Chain D, The Isomerase Domain Of Human Glutamine-Fructose-6-
Phosphate Transaminase 1 (Gfpt1) In Complex With
Fructose 6-Phosphate
Length = 376
Score = 446 bits (1148), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/374 (57%), Positives = 285/374 (76%), Gaps = 6/374 (1%)
Query: 263 EQINKGNYEHYMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLKTIRRSRRI 322
+QI KGN+ +MQKEI EQPES+ TMRGR+ + +V LGGLKDH+K I+R RR+
Sbjct: 9 QQIMKGNFSSFMQKEIFEQPESVVNTMRGRV----NFDDYTVNLGGLKDHIKEIQRCRRL 64
Query: 323 VFIGCGTSYNAALAARPILEELSDLPVTMEIASDLVDRQAPIYREDTAVFVSQSGETADT 382
+ I CGTSY+A +A R +LEEL++LPV +E+ASD +DR P++R+D F+SQSGETADT
Sbjct: 65 ILIACGTSYHAGVATRQVLEELTELPVMVELASDFLDRNTPVFRDDVCFFLSQSGETADT 124
Query: 383 LQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVMAMLA 442
L L Y E GAL VGITNTVGS+I+R+T CGVHINAG EIGVASTKAYTSQ V + M A
Sbjct: 125 LMGLRYCKERGALTVGITNTVGSSISRETDCGVHINAGPEIGVASTKAYTSQFVSLVMFA 184
Query: 443 LAIGGDTISTQARREAIIDGLCDLPNKVREVLKLDQEMKVLAKQLIAEQSLLVFGRGYNY 502
L + D IS Q RR+ I+ GL LP+ ++EVL +D E++ LA +L ++S+L+ GRGY+Y
Sbjct: 185 LMMCDDRISMQERRKEIMLGLKRLPDLIKEVLSMDDEIQKLATELYHQKSVLIMGRGYHY 244
Query: 503 ATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQSVIQQL 562
AT LEGALK+KE+ MHSEGILAGE+KHGPLALVD+ +P+++I RD ++K Q+ +QQ+
Sbjct: 245 ATCLEGALKIKEITYMHSEGILAGELKHGPLALVDKLMPVIMIIMRDHTYAKCQNALQQV 304
Query: 563 HARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVEDCLQPVINIVPLQLLAYHLTVLRGYN 622
AR+GR +V+C K D +I + R I+VP DCLQ +++++PLQLLA+HL VLRGY+
Sbjct: 305 VARQGRPVVICDKEDTETI--KNTKRTIKVPHSVDCLQGILSVIPLQLLAFHLAVLRGYD 362
Query: 623 VDQPRNLAKSVTTQ 636
VD PRNLAKSVT +
Sbjct: 363 VDFPRNLAKSVTVE 376
>pdb|2POC|A Chain A, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2POC|B Chain B, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2POC|C Chain C, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2POC|D Chain D, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUT|A Chain A, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUT|B Chain B, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUT|C Chain C, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUT|D Chain D, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUV|A Chain A, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUV|B Chain B, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUV|C Chain C, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUV|D Chain D, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-Phosphate Synthase From Candida Albicans
pdb|2PUW|A Chain A, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-phosphate Synthase From Candida Albicans
pdb|2PUW|B Chain B, The Crystal Structure Of Isomerase Domain Of
Glucosamine-6-phosphate Synthase From Candida Albicans
Length = 367
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/371 (57%), Positives = 283/371 (76%), Gaps = 6/371 (1%)
Query: 267 KGNYEHYMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLKTIRRSRRIVFIG 326
KG Y+H+MQKEI EQP+S TMRGR I +C V LGGLK L TIRR RRI+ I
Sbjct: 2 KGPYKHFMQKEIFEQPDSAFNTMRGR-IDFENC---VVTLGGLKSWLSTIRRCRRIIMIA 57
Query: 327 CGTSYNAALAARPILEELSDLPVTMEIASDLVDRQAPIYREDTAVFVSQSGETADTLQAL 386
CGTSY++ LA R I EEL+++PV++E+ASD +DR++P++R+DT VFVSQSGETAD++ AL
Sbjct: 58 CGTSYHSCLATRSIFEELTEIPVSVELASDFLDRRSPVFRDDTCVFVSQSGETADSILAL 117
Query: 387 EYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIG 446
+Y E GAL VGI N+VGS+++R+THCGVHINAG EIGVASTKAYTSQ + + M AL++
Sbjct: 118 QYCLERGALTVGIVNSVGSSMSRQTHCGVHINAGPEIGVASTKAYTSQYIALVMFALSLS 177
Query: 447 GDTISTQARREAIIDGLCDLPNKVREVLKLDQEMKVLAKQLIAEQ-SLLVFGRGYNYATA 505
D+IS + R E II GL +P ++++VLKL+ ++K L + +Q SLL+ GRGY +ATA
Sbjct: 178 NDSISRKGRHEEIIKGLQKIPEQIKQVLKLENKIKDLCNSSLNDQKSLLLLGRGYQFATA 237
Query: 506 LEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQSVIQQLHAR 565
LEGALK+KE++ MHSEG+LAGE+KHG LALVDE+LPI+ ATRD+ F K S I+Q+ AR
Sbjct: 238 LEGALKIKEISYMHSEGVLAGELKHGILALVDEDLPIIAFATRDSLFPKVMSAIEQVTAR 297
Query: 566 KGRLIVMCSKGDAASIFPGGSCRVIEVPQVEDCLQPVINIVPLQLLAYHLTVLRGYNVDQ 625
GR IV+C++GDA I +EVP+ DCLQ ++N++PLQL++Y L V RG +VD
Sbjct: 298 DGRPIVICNEGDAI-ISNDKVHTTLEVPETVDCLQGLLNVIPLQLISYWLAVNRGIDVDF 356
Query: 626 PRNLAKSVTTQ 636
PRNLAKSVT +
Sbjct: 357 PRNLAKSVTVE 367
>pdb|1JXA|A Chain A, Glucosamine 6-Phosphate Synthase With Glucose 6-Phosphate
pdb|1JXA|B Chain B, Glucosamine 6-Phosphate Synthase With Glucose 6-Phosphate
pdb|1JXA|C Chain C, Glucosamine 6-Phosphate Synthase With Glucose 6-Phosphate
pdb|2BPL|A Chain A, E.Coli Glucosamine-6p Synthase In Complex With Fructose-6p
pdb|2BPL|B Chain B, E.Coli Glucosamine-6p Synthase In Complex With Fructose-6p
pdb|2BPL|C Chain C, E.Coli Glucosamine-6p Synthase In Complex With Fructose-6p
Length = 608
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 237/658 (36%), Positives = 358/658 (54%), Gaps = 73/658 (11%)
Query: 2 CGIFAYLNYGVNRERRYILQVLFNGLRRLEYRGYDSAGICIDDXXXXXXXXXXXXXVNGC 61
CGI + +R + ++L GLRRLEYRGYDSAG+ + D
Sbjct: 1 CGIVGAI------AQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMTR---------- 44
Query: 62 PPLVFRQEGNIESLVKSVYXXXXXXXXXXXXSFSIHAG--IAHTRWATHGEPAPRNSHPQ 119
R+ G ++ L ++ +H G IAHTRWATHGEP+ N+HP
Sbjct: 45 ----LRRLGKVQMLAQAA------------EEHPLHGGTGIAHTRWATHGEPSEVNAHPH 88
Query: 120 TSGAGNEFLVVHNGVITNYEVLKETLIRHGFTFESETDTEVIPKLAKFVFDKANEEEGDQ 179
S +VVHNG+I N+E L+E L G+TF SETDTEVI L + E Q
Sbjct: 89 VS---EHIVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNW--------ELKQ 137
Query: 180 PVTFSQVVVEVMRHLEGAYALIFKSQHYPNELIACKRGSPLLLGVKDGA----------- 228
T + V+ + L GAY + +P+ L+A + GSPL++G+ G
Sbjct: 138 GGTLREAVLRAIPQLRGAYGTVIMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALL 197
Query: 229 ------VSILKFDNAK--GRNGGTYARP-ASVQRALSILEMEVEQINKGNYEHYMQKEIH 279
+ + + D A+ R+ + + A V+R ++ + +KG Y HYMQKEI+
Sbjct: 198 PVTRRFIFLEEGDIAEITRRSVNIFDKTGAEVKRQDIESNLQYDAGDKGIYRHYMQKEIY 257
Query: 280 EQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARP 339
EQP ++ T+ GR+ G ++ LG D L + + I + CGTSYN+ + +R
Sbjct: 258 EQPNAIKNTLTGRISHGQVDLSE---LGPNADEL--LSKVEHIQILACGTSYNSGMVSRY 312
Query: 340 ILEELSDLPVTMEIASDLVDRQAPIYREDTAVFVSQSGETADTLQALEYASENGAL-CVG 398
E L+ +P +EIAS+ R++ + R + +SQSGETADTL L + E G L +
Sbjct: 313 WFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLA 372
Query: 399 ITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISTQARREA 458
I N GS++ R++ + NAG EIGVASTKA+T+Q+ V+ ML + +
Sbjct: 373 ICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVLLMLVAKLSKLKGLDASIEHD 432
Query: 459 IIDGLCDLPNKVREVLKLDQEMKVLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALM 518
I+ GL LP+++ ++L D+ ++ LA+ + L GRG Y ALEGALK+KE++ +
Sbjct: 433 IVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYI 492
Query: 519 HSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDA 578
H+E AGE+KHGPLAL+D ++P++V+A + K +S I+++ AR G+L V +
Sbjct: 493 HAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQD-- 550
Query: 579 ASIFPGGSCRVIEVPQVEDCLQPVINIVPLQLLAYHLTVLRGYNVDQPRNLAKSVTTQ 636
A + +IE+P VE+ + P+ VPLQLLAYH+ +++G +VDQPRNLAKSVT +
Sbjct: 551 AGFVSSDNMHIIEMPHVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE 608
>pdb|2J6H|A Chain A, E. Coli Glucosamine-6-p Synthase In Complex With
Glucose-6p And 5-oxo-l-norleucine
pdb|2J6H|B Chain B, E. Coli Glucosamine-6-p Synthase In Complex With
Glucose-6p And 5-oxo-l-norleucine
pdb|2VF4|X Chain X, E. Coli Glucosamine-6-P Synthase
pdb|2VF5|X Chain X, Glucosamine-6-Phosphate Synthase In Complex With
Glucosamine-6-Phosphate
Length = 608
Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 237/658 (36%), Positives = 358/658 (54%), Gaps = 73/658 (11%)
Query: 2 CGIFAYLNYGVNRERRYILQVLFNGLRRLEYRGYDSAGICIDDXXXXXXXXXXXXXVNGC 61
CGI + +R + ++L GLRRLEYRGYDSAG+ + D
Sbjct: 1 CGIVGAI------AQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMTR---------- 44
Query: 62 PPLVFRQEGNIESLVKSVYXXXXXXXXXXXXSFSIHAG--IAHTRWATHGEPAPRNSHPQ 119
R+ G ++ L ++ +H G IAHTRWATHGEP+ N+HP
Sbjct: 45 ----LRRLGKVQMLAQAA------------EEHPLHGGTGIAHTRWATHGEPSEVNAHPH 88
Query: 120 TSGAGNEFLVVHNGVITNYEVLKETLIRHGFTFESETDTEVIPKLAKFVFDKANEEEGDQ 179
S +VVHNG+I N+E L+E L G+TF SETDTEVI L + E Q
Sbjct: 89 VS---EHIVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNW--------ELKQ 137
Query: 180 PVTFSQVVVEVMRHLEGAYALIFKSQHYPNELIACKRGSPLLLGVKDGA----------- 228
T + V+ + L GAY + +P+ L+A + GSPL++G+ G
Sbjct: 138 GGTLREAVLRAIPQLRGAYGTVIMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALL 197
Query: 229 ------VSILKFDNAK--GRNGGTYARP-ASVQRALSILEMEVEQINKGNYEHYMQKEIH 279
+ + + D A+ R+ + + A V+R ++ + +KG Y HYMQKEI+
Sbjct: 198 PVTRRFIFLEEGDIAEITRRSVNIFDKTGAEVKRQDIESNLQYDAGDKGIYRHYMQKEIY 257
Query: 280 EQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARP 339
EQP ++ T+ GR+ G ++ LG D L + + I + CGTSYN+ + +R
Sbjct: 258 EQPNAIKNTLTGRISHGQVDLSE---LGPNADEL--LSKVEHIQILACGTSYNSGMVSRY 312
Query: 340 ILEELSDLPVTMEIASDLVDRQAPIYREDTAVFVSQSGETADTLQALEYASENGAL-CVG 398
E L+ +P +EIAS+ R++ + R + +SQSGETADTL L + E G L +
Sbjct: 313 WFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLA 372
Query: 399 ITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISTQARREA 458
I N GS++ R++ + NAG EIGVASTKA+T+Q+ V+ ML + +
Sbjct: 373 ICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKGLDASIEHD 432
Query: 459 IIDGLCDLPNKVREVLKLDQEMKVLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALM 518
I+ GL LP+++ ++L D+ ++ LA+ + L GRG Y ALEGALK+KE++ +
Sbjct: 433 IVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYI 492
Query: 519 HSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDA 578
H+E AGE+KHGPLAL+D ++P++V+A + K +S I+++ AR G+L V +
Sbjct: 493 HAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQD-- 550
Query: 579 ASIFPGGSCRVIEVPQVEDCLQPVINIVPLQLLAYHLTVLRGYNVDQPRNLAKSVTTQ 636
A + +IE+P VE+ + P+ VPLQLLAYH+ +++G +VDQPRNLAKSVT +
Sbjct: 551 AGFVSSDNMHIIEMPHVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE 608
>pdb|3OOJ|A Chain A, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|B Chain B, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|C Chain C, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|D Chain D, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|E Chain E, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|F Chain F, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|G Chain G, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
pdb|3OOJ|H Chain H, C1a Mutant Of E. Coli Glms In Complex With Glucose-6p And
Glutamate
Length = 608
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 234/644 (36%), Positives = 354/644 (54%), Gaps = 67/644 (10%)
Query: 16 RRYILQVLFNGLRRLEYRGYDSAGICIDDXXXXXXXXXXXXXVNGCPPLVFRQEGNIESL 75
+R + ++L GLRRLEYRGYDSAG+ + D R+ G ++ L
Sbjct: 9 QRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMTR--------------LRRLGKVQML 54
Query: 76 VKSVYXXXXXXXXXXXXSFSIHAG--IAHTRWATHGEPAPRNSHPQTSGAGNEFLVVHNG 133
++ +H G IAHTRWATHGEP+ N+HP S +VVHNG
Sbjct: 55 AQAA------------EEHPLHGGTGIAHTRWATHGEPSEVNAHPHVS---EHIVVVHNG 99
Query: 134 VITNYEVLKETLIRHGFTFESETDTEVIPKLAKFVFDKANEEEGDQPVTFSQVVVEVMRH 193
+I N+E L+E L G+TF SETDTEVI L + E Q T + V+ +
Sbjct: 100 IIENHEPLREELKARGYTFVSETDTEVIAHLVNW--------ELKQGGTLREAVLRAIPQ 151
Query: 194 LEGAYALIFKSQHYPNELIACKRGSPLLLGVKDGA-----------------VSILKFDN 236
L GAY + +P+ L+A + GSPL++G+ G + + + D
Sbjct: 152 LRGAYGTVIMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRFIFLEEGDI 211
Query: 237 AK--GRNGGTYARP-ASVQRALSILEMEVEQINKGNYEHYMQKEIHEQPESLTTTMRGRL 293
A+ R+ + + A V+R ++ + +KG Y HYMQKEI+EQP ++ T+ GR+
Sbjct: 212 AEITRRSVNIFDKTGAEVKRQDIESNLQYDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRI 271
Query: 294 IRGGSCKAKSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEI 353
G ++ LG D L + + I + CGTSYN+ + +R E L+ +P +EI
Sbjct: 272 SHGQVDLSE---LGPNADEL--LSKVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEI 326
Query: 354 ASDLVDRQAPIYREDTAVFVSQSGETADTLQALEYASENGAL-CVGITNTVGSAIARKTH 412
AS+ R++ + R + +SQSGETADTL L + E G L + I N GS++ R++
Sbjct: 327 ASEFRYRKSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESD 386
Query: 413 CGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISTQARREAIIDGLCDLPNKVRE 472
+ NAG EIGVASTKA+T+Q+ V+ ML + + I+ GL LP+++ +
Sbjct: 387 LALMTNAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQ 446
Query: 473 VLKLDQEMKVLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGP 532
+L D+ ++ LA+ + L GRG Y ALEGALK+KE++ +H+E AGE+KHGP
Sbjct: 447 MLSQDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGP 506
Query: 533 LALVDENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEV 592
LAL+D ++P++V+A + K +S I+++ AR G+L V + A + +IE+
Sbjct: 507 LALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQD--AGFVSSDNMHIIEM 564
Query: 593 PQVEDCLQPVINIVPLQLLAYHLTVLRGYNVDQPRNLAKSVTTQ 636
P VE+ + P+ VPLQLLAYH+ +++G +VDQPRNLAKSVT +
Sbjct: 565 PHVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE 608
>pdb|1MOS|A Chain A, Isomerase Domain Of Glucosamine 6-phosphate Synthase
Complexed With 2- Amino-2-deoxyglucitol 6-phosphate
pdb|1MOQ|A Chain A, Isomerase Domain Of Glucosamine 6-Phosphate Synthase
Complexed With Glucosamine 6-Phosphate
pdb|1MOR|A Chain A, Isomerase Domain Of Glucosamine 6-Phosphate Synthase
Complexed With Glucose 6-Phosphate
Length = 368
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/372 (40%), Positives = 228/372 (61%), Gaps = 8/372 (2%)
Query: 266 NKGNYEHYMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLKTIRRSRRIVFI 325
+KG Y HYMQKEI+EQP ++ T+ GR+ G ++ LG D L + + I +
Sbjct: 4 DKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQVDLSE---LGPNADEL--LSKVEHIQIL 58
Query: 326 GCGTSYNAALAARPILEELSDLPVTMEIASDLVDRQAPIYREDTAVFVSQSGETADTLQA 385
CGTSYN+ + +R E L+ +P +EIAS+ R++ + R + +SQSGETADTL
Sbjct: 59 ACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAG 118
Query: 386 LEYASENGAL-CVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALA 444
L + E G L + I N GS++ R++ + NAG EIGVASTKA+T+Q+ V+ ML
Sbjct: 119 LRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVLLMLVAK 178
Query: 445 IGGDTISTQARREAIIDGLCDLPNKVREVLKLDQEMKVLAKQLIAEQSLLVFGRGYNYAT 504
+ + I+ GL LP+++ ++L D+ ++ LA+ + L GRG Y
Sbjct: 179 LSRLKGLDASIEHDIVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQYPI 238
Query: 505 ALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQSVIQQLHA 564
ALEGALK+KE++ +H+E AGE+KHGPLAL+D ++P++V+A + K +S I+++ A
Sbjct: 239 ALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRA 298
Query: 565 RKGRLIVMCSKGDAASIFPGGSCRVIEVPQVEDCLQPVINIVPLQLLAYHLTVLRGYNVD 624
R G+L V + A + +IE+P VE+ + P+ VPLQLLAYH+ +++G +VD
Sbjct: 299 RGGQLYVFADQD--AGFVSSDNMHIIEMPHVEEVIAPIFYTVPLQLLAYHVALIKGTDVD 356
Query: 625 QPRNLAKSVTTQ 636
QPRNLAKSVT +
Sbjct: 357 QPRNLAKSVTVE 368
>pdb|3TBF|A Chain A, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis.
pdb|3TBF|B Chain B, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis.
pdb|3TBF|C Chain C, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis.
pdb|3TBF|D Chain D, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis.
pdb|3TBF|E Chain E, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis.
pdb|3TBF|F Chain F, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis.
pdb|3TBF|G Chain G, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis.
pdb|3TBF|H Chain H, C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate
Aminotransferase From Francisella Tularensis
Length = 372
Score = 245 bits (625), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/376 (37%), Positives = 218/376 (57%), Gaps = 14/376 (3%)
Query: 266 NKGNYEHYMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLKTI-RRSRRIVF 324
+K Y+HY KEI+EQPE+++ T+ L G + L K + +++ I
Sbjct: 6 SKDGYKHYXLKEIYEQPEAVSNTILASLADG------EISLDSFDKRAKELFEKTKHICI 59
Query: 325 IGCGTSYNAALAARPILEELSDLPVTMEIASDLVDRQAPIYREDTAVFVSQSGETADTLQ 384
+ CGTSYNA A+ +E+ + +P ++EIAS++ R + V +SQSGETADTL+
Sbjct: 60 VACGTSYNAGXTAKYWIEKYAKVPCSVEIASEIRYRDNVVVDGSLFVSISQSGETADTLE 119
Query: 385 ALEYASEN---GALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVMAML 441
+L + + G+ C I N S++ R++ AG EIGVASTKA+T+Q+V +A+
Sbjct: 120 SLRKSKKQNYVGSXC--ICNVPNSSLVRESDIAFXTKAGVEIGVASTKAFTTQLVALAIF 177
Query: 442 ALAIGGDTIS-TQARREAIIDGLCDLPNKVREVLKLDQEMKVLAKQLIAEQSLLVFGRGY 500
L I S T + + L ++ V LKLD E+ +++ ++ + GRG
Sbjct: 178 TLVIAKLKNSLTDQQIAKYTEELKNIRALVXGALKLDTEIDQISEYFSDKEHTIFLGRGL 237
Query: 501 NYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQSVIQ 560
Y A+EGALK+KE++ +H+E +GE+KHGPLALVD+N PI+ + D K S +Q
Sbjct: 238 YYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNXPIVAVVPNDELLDKTLSNLQ 297
Query: 561 QLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVEDCLQPVINIVPLQLLAYHLTVLRG 620
++HAR G+LI+ K + S V+E+ D PV+ +PLQLL+YH+ +++G
Sbjct: 298 EVHARGGKLILFVDKAVKERVNFDNSI-VLELDAGHDFSAPVVFTIPLQLLSYHVAIIKG 356
Query: 621 YNVDQPRNLAKSVTTQ 636
+VDQPRNLAKSVT +
Sbjct: 357 TDVDQPRNLAKSVTVE 372
>pdb|1XFF|A Chain A, Glutaminase Domain Of Glucosamine 6-Phosphate Synthase
Complexed With Glutamate
pdb|1XFF|B Chain B, Glutaminase Domain Of Glucosamine 6-Phosphate Synthase
Complexed With Glutamate
pdb|1XFG|A Chain A, Glutaminase Domain Of Glucosamine 6-phosphate Synthase
Complexed With L-glu Hydroxamate
pdb|1XFG|B Chain B, Glutaminase Domain Of Glucosamine 6-phosphate Synthase
Complexed With L-glu Hydroxamate
Length = 240
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 113/228 (49%), Gaps = 45/228 (19%)
Query: 2 CGIFAYLNYGVNRERRYILQVLFNGLRRLEYRGYDSAGICIDDXXXXXXXXXXXXXVNGC 61
CGI + +R + ++L GLRRLEYRGYDSAG+ + D
Sbjct: 1 CGIVGAI------AQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMTR---------- 44
Query: 62 PPLVFRQEGNIESLVKSVYXXXXXXXXXXXXSFSIHAG--IAHTRWATHGEPAPRNSHPQ 119
R+ G ++ L ++ +H G IAHTRWATHGEP+ N+HP
Sbjct: 45 ----LRRLGKVQMLAQAA------------EEHPLHGGTGIAHTRWATHGEPSEVNAHPH 88
Query: 120 TSGAGNEFLVVHNGVITNYEVLKETLIRHGFTFESETDTEVIPKLAKFVFDKANEEEGDQ 179
S +VVHNG+I N+E L+E L G+TF SETDTEVI L + E Q
Sbjct: 89 VS---EHIVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNW--------ELKQ 137
Query: 180 PVTFSQVVVEVMRHLEGAYALIFKSQHYPNELIACKRGSPLLLGVKDG 227
T + V+ + L GAY + +P+ L+A + GSPL++G+ G
Sbjct: 138 GGTLREAVLRAIPQLRGAYGTVIMDSRHPDTLLAARSGSPLVIGLGMG 185
>pdb|3FJ1|A Chain A, Crystal Structure Of Putative Phosphosugar Isomerase
(Yp_167080.1) From Silicibacter Pomeroyi Dss-3 At 1.75 A
Resolution
pdb|3FJ1|B Chain B, Crystal Structure Of Putative Phosphosugar Isomerase
(Yp_167080.1) From Silicibacter Pomeroyi Dss-3 At 1.75 A
Resolution
pdb|3FJ1|C Chain C, Crystal Structure Of Putative Phosphosugar Isomerase
(Yp_167080.1) From Silicibacter Pomeroyi Dss-3 At 1.75 A
Resolution
pdb|3FJ1|D Chain D, Crystal Structure Of Putative Phosphosugar Isomerase
(Yp_167080.1) From Silicibacter Pomeroyi Dss-3 At 1.75 A
Resolution
Length = 344
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 122/265 (46%), Gaps = 21/265 (7%)
Query: 373 VSQSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAY- 431
VSQSG++ D + A +GALCV +TN S +A + + I+AG E+ VA+TK +
Sbjct: 98 VSQSGKSPDIVAXTRNAGRDGALCVALTNDAASPLAGVSAHTIDIHAGPELSVAATKTFV 157
Query: 432 TSQIVVMAMLALAIGGDTISTQARREAIIDGLCDLPNKVREVLKLDQEMKVLAKQLIAEQ 491
TS + + +LA A + + L +LP + ++D +A + A
Sbjct: 158 TSAVAGLXLLA---------DWAEDDGLRAALGNLPETLAAASRIDWPEXRVA--IGARP 206
Query: 492 SLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDAC 551
SL GRG + A + E ALK KE +H+E + E+ HGP+++V+E P+L A DA
Sbjct: 207 SLFTLGRGTSLAVSNEAALKFKETCQLHAESYSSAEVLHGPVSIVEEGFPVLGFAAGDAA 266
Query: 552 FSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIE-VPQVEDCLQPVINIVPLQL 610
+ + Q+ A+ + + A RV+E V P+ IV
Sbjct: 267 EAPLAEIADQIAAKGATVFATTGRVTRA--------RVLEHVRSGHALTDPLSLIVSFYS 318
Query: 611 LAYHLTVLRGYNVDQPRNLAKSVTT 635
RG + D PR+L K T
Sbjct: 319 XVEAFASERGIDPDAPRHLNKVTET 343
>pdb|3HBA|A Chain A, Crystal Structure Of A Putative Phosphosugar Isomerase
(Sden_2705) From Shewanella Denitrificans Os217 At 2.00
A Resolution
pdb|3HBA|B Chain B, Crystal Structure Of A Putative Phosphosugar Isomerase
(Sden_2705) From Shewanella Denitrificans Os217 At 2.00
A Resolution
Length = 334
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 125/266 (46%), Gaps = 35/266 (13%)
Query: 318 RSRRIVFIGCGTSYNAALAARPILEELSDLPV-------------TMEIASDLVDRQAPI 364
+ + + +G G+S +A + A+ + E + +P T+++A LV
Sbjct: 41 KPKFVXIVGRGSSDHAGVFAKYLFEIEASIPTFAAAPSVASVYGKTLKLAGGLV------ 94
Query: 365 YREDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIG 424
+ +SQSG + D L A GA CV + N + I + + AG E
Sbjct: 95 ------IVISQSGRSPDILAQARXAKNAGAFCVALVNDETAPIKDIVDVVIPLRAGEEKA 148
Query: 425 VASTKAYTSQIVVMAMLALAIGGDTISTQARREAIIDGLCDLPNKVREVLKLDQEMKVLA 484
VA+TK+Y + + + +A + + E++++ + LP ++ + D E ++ A
Sbjct: 149 VAATKSYLATLSALLQVA--------AKWTQNESLVEAVNSLPQALQAAV--DAEPQLRA 198
Query: 485 KQLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILV 544
L ++L+V GRG+ YA + E ALK+KEV +H+E + E HGP+ LV++ L IL
Sbjct: 199 GSLTDVKNLVVLGRGFGYAVSKEIALKLKEVCAIHAEAFSSAEFLHGPVTLVEKKLSILD 258
Query: 545 IATRDACFSKQQSVIQQLHARKGRLI 570
+ RD + I + R LI
Sbjct: 259 VCIRDESYGSHVEQIANVKQRGANLI 284
>pdb|2CB0|A Chain A, Crystal Structure Of Glucosamine 6-Phosphate Deaminase
From Pyrococcus Furiosus
pdb|2CB0|B Chain B, Crystal Structure Of Glucosamine 6-Phosphate Deaminase
From Pyrococcus Furiosus
Length = 333
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 149/320 (46%), Gaps = 26/320 (8%)
Query: 316 IRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIASDLVDRQA-PIYREDTAVFVS 374
IR RRI+++GCG+S+ A + V + + L ++A PI + + V +S
Sbjct: 28 IRLPRRILYLGCGSSHFLAKLLAXVTNXHGGTGVALPCSEFLYSKEAYPIGKPELVVGIS 87
Query: 375 QSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTS- 433
+SGET + L ALE + +GI+ S++ R + + E V T ++T+
Sbjct: 88 RSGETTEVLLALEKINTPK---LGIS-AYESSLTRACDYSLVVPTIEE-SVVXTHSFTAF 142
Query: 434 QIVVMAMLALAIGGDTISTQARREAIIDGLCDLPNKVREVLKLDQEMKVLAKQLIAEQSL 493
+ +L + G + +A L + N ++E+++ D + Q++
Sbjct: 143 YFAYLQLLRHSYGLPLLEATEVAKATEKAL-EYENYIKEIVE-DFDF----------QNV 190
Query: 494 LVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFS 553
+ G G Y ALE +LK KE A+ SE E++HG A+ DEN LV+ F
Sbjct: 191 IFLGSGLLYPVALEASLKXKEXAIFWSEAYPTFEVRHGFKAIADEN--TLVVLXAQELFE 248
Query: 554 KQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVEDCLQPVINIVPLQLLAY 613
+ ++ + ++ R++++ + G IEVP++ P+ + +QLL+Y
Sbjct: 249 WHKKLVNEFKGQRARVLLISNSQQEF-----GQDYSIEVPRLSKDATPIPYLPVVQLLSY 303
Query: 614 HLTVLRGYNVDQPRNLAKSV 633
+ V RG N D PR L K V
Sbjct: 304 YKAVARGLNPDNPRFLDKVV 323
>pdb|2DEC|A Chain A, Crystal Structure Of The Ph0510 Protein From Pyrococcus
Horikoshii Ot3
pdb|2DEC|B Chain B, Crystal Structure Of The Ph0510 Protein From Pyrococcus
Horikoshii Ot3
pdb|2DF8|A Chain A, Crystal Structure Of The Ph0510 Protein From Pyrococcus
Horikoshii Ot3 In Complex With
Beta-D-Fructopyranose-1-Phosphate
pdb|2DF8|B Chain B, Crystal Structure Of The Ph0510 Protein From Pyrococcus
Horikoshii Ot3 In Complex With
Beta-D-Fructopyranose-1-Phosphate
pdb|2E5F|A Chain A, Crystal Structure Of The Ph0510 Protein From Pyrococcus
Horikoshii Ot3 In Complex With Phosphate Ion
pdb|2E5F|B Chain B, Crystal Structure Of The Ph0510 Protein From Pyrococcus
Horikoshii Ot3 In Complex With Phosphate Ion
Length = 325
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 156/339 (46%), Gaps = 30/339 (8%)
Query: 297 GSCKAKSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIASD 356
G KA V +KD I RI+++GCG+S+ + + L + + +
Sbjct: 13 GIIKADKVF-NKVKDK---ISLPNRILYLGCGSSHFLSKLLAMVTNMHGGLGIALPCSEF 68
Query: 357 LVDRQA-PIYREDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGV 415
L ++ PI + AV +S+SGET + L ALE + +GIT T S++ R +
Sbjct: 69 LYSKETYPIGEVELAVGISRSGETTEILLALEKINVKK---LGIT-TRESSLTRMCDYSL 124
Query: 416 HINAGAEIGVASTKAYTS-QIVVMAMLALAIGGDTISTQARREAIIDGLCDLPNKVREVL 474
+ A E V T ++TS + +L + G ++ +A L + +RE++
Sbjct: 125 VVPAIEE-SVVMTHSFTSFYFAYLQLLRYSYGLPPLNAGEISKATEKSL-EYERYIREIV 182
Query: 475 KLDQEMKVLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLA 534
+ Q+++ G G Y ALE +LK+KE+++ SE E++HG A
Sbjct: 183 -----------ESFDFQNIIFLGSGLLYPVALEASLKMKEMSIFWSEAYPTFEVRHGFKA 231
Query: 535 LVDENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQ 594
+ DE LV+ + F + ++++ + +++V+ + G IE+P+
Sbjct: 232 IADEK--TLVVLMVEEPFEWHEKLVKEFKNQGAKVLVISNSPQDL-----GQDYSIELPR 284
Query: 595 VEDCLQPVINIVPLQLLAYHLTVLRGYNVDQPRNLAKSV 633
+ P+ + +QLL+Y+ V RG N D PR L K V
Sbjct: 285 LSKDANPIPYLPIVQLLSYYKAVSRGLNPDNPRFLDKVV 323
>pdb|1J5X|A Chain A, Crystal Structure Of Glucosamine-6-Phosphate Deaminase
(Tm0813) From Thermotoga Maritima At 1.8 A Resolution
Length = 342
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 135/314 (42%), Gaps = 30/314 (9%)
Query: 322 IVFIGCGTSYNAALAARPILEELSDLPVTMEIASDLVDRQAPIYREDTAVFV-SQSGETA 380
++F+GCG+SYN AL E + + A ++ ++ P E F+ S++G T
Sbjct: 55 VLFVGCGSSYNLALTISYYFERVLKIRTKAIPAGEVAFQKIPDLEERGLAFLFSRTGNTT 114
Query: 381 DTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVMAM 440
+ L A + + +GIT S +A+++ + E + TK+++ ++ +
Sbjct: 115 EVLLANDVLKKRNHRTIGITIEEESRLAKESDLPLVFPVREE-AIVXTKSFSXILLSLXF 173
Query: 441 LALAIGGDTISTQARREAIIDGLCDLPNKVREVLKLDQEMKVLAKQLIAEQSLLVF-GRG 499
LA I G++ + +L E D KV+ K + E VF G
Sbjct: 174 LADKIAGNST----------ERFSELVGYSPEFF--DISWKVIEKIDLKEHDHFVFLGXS 221
Query: 500 YNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQSVI 559
+ +LE ALK E +L SE E +HGP ALV + LV + + +Q+ +
Sbjct: 222 EFFGVSLESALKCIEXSLTFSEAYSTLEYRHGPKALVKKG--TLVFXQKVSGXDEQEKRL 279
Query: 560 QQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVEDCLQPVINIVPLQLLAYHLTVLR 619
++ G ++ +G ++P D + VP Q+L Y + R
Sbjct: 280 RKELESLGATVLEVGEGG-------------DIPVSNDWKSAFLRTVPAQILGYQKAISR 326
Query: 620 GYNVDQPRNLAKSV 633
G + D+P +L K+V
Sbjct: 327 GISPDKPPHLEKTV 340
>pdb|3G68|A Chain A, Crystal Structure Of A Putative Phosphosugar Isomerase
(cd3275) From Clostridium Difficile 630 At 1.80 A
Resolution
pdb|3G68|B Chain B, Crystal Structure Of A Putative Phosphosugar Isomerase
(cd3275) From Clostridium Difficile 630 At 1.80 A
Resolution
Length = 352
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 134/314 (42%), Gaps = 15/314 (4%)
Query: 320 RRIVFIGCGTSYNAALAARPILEELSDLPVTMEIASDLVDRQAPIYREDTAVF-VSQSGE 378
++I+ G GTSY++ + +P L+ L D+ V + + E+T V VSQ G
Sbjct: 35 KKIIITGSGTSYHSGVQVQPYLQNLLDIDVVKXYPFXITEDTFKFDNENTLVVGVSQGGS 94
Query: 379 TADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVM 438
+ T A + A + G + I + + +N G E A TK Y + +
Sbjct: 95 SYSTYNAXKLAEDKGCKIASXAGCKNALIDEISDYILTVNCGEEKSGAKTKGYYCTKLNL 154
Query: 439 AMLALAIGGDT--ISTQARREAIIDGLCDLPNKVREVLKLD-QEMKVLAKQLIAEQSLLV 495
+L L I + IS++ E I+ + D N+ V KL Q ++ ++L+ + + +
Sbjct: 155 XLLGLQIAREKGIISSEKYNEE-INKILDAINRFEAVYKLSKQWIERNKEKLVNSKEIRI 213
Query: 496 FGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQ 555
G Y LE ALK+ E + G E HG ++ + I ++ T K+
Sbjct: 214 IGHSDIYGDTLEAALKLLETXRIPVTGYEFEEFIHGIYNAINSDSTIFILDT-----GKE 268
Query: 556 QSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVEDCLQPVIN-IVPLQLLAYH 614
V + + G + + G + + + +++ ++ N IVP+QL+
Sbjct: 269 PRVTKXIDVLSGWTENVFAIGRDVT----ENDKNLKIDITDNPYYQTFNFIVPIQLICGE 324
Query: 615 LTVLRGYNVDQPRN 628
+ LRG + P++
Sbjct: 325 IPTLRGVDPSVPKD 338
>pdb|3EUA|A Chain A, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|B Chain B, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|C Chain C, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|D Chain D, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|E Chain E, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|F Chain F, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|G Chain G, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
pdb|3EUA|H Chain H, Crystal Structure Of A Putative Phosphosugar Isomerase
(Bsu32610) From Bacillus Subtilis At 1.90 A Resolution
Length = 329
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 12/233 (5%)
Query: 322 IVFIGCGTSYNAALAARPILE-ELSDLPVTMEIASDLVDRQAPIYREDTAVFV-SQSGET 379
+ F+ CG S ++ + + E + + A++ + R E + V + S SG T
Sbjct: 28 VFFVACGGSSAIXYPSKYVFDRESKSINSDLYSANEFIQRNPVQLGEKSLVILCSHSGNT 87
Query: 380 ADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAE-IGVASTKAYTSQIVVM 438
+T++A +A GAL + T S +A++ + G E + + + QIV
Sbjct: 88 PETVKAAAFARGKGALTIAXTFKPESPLAQEAQYVAQYDWGDEALAINTNYGVLYQIVFG 147
Query: 439 AMLALAIGGDTISTQARREAIIDGLCDLPNKVREVLKLDQE-MKVLAKQLIAEQSLLVFG 497
+ L + E I+GL L + LK + + K AK E +
Sbjct: 148 TLQVL-------ENNTKFEQAIEGLDQLQAVYEKALKQEADNAKQFAKAHEKESIIYTXA 200
Query: 498 RGYNYATALEGALKV-KEVALMHSEGILAGEMKHGPLALVDENLPILVIATRD 549
G NY A ++ + E +HS I AGE HGP ++DE++P +++ D
Sbjct: 201 SGANYGVAYSYSICILXEXQWIHSHAIHAGEYFHGPFEIIDESVPFIILLGLD 253
>pdb|2AML|A Chain A, Crystal Structure Of Lmo0035 Protein (46906266) From
Listeria Monocytogenes 4b F2365 At 1.50 A Resolution
pdb|2AML|B Chain B, Crystal Structure Of Lmo0035 Protein (46906266) From
Listeria Monocytogenes 4b F2365 At 1.50 A Resolution
Length = 373
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 130/309 (42%), Gaps = 17/309 (5%)
Query: 319 SRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIASDLVDRQAPIYREDTAVFVSQSGE 378
++ + + G+S NAA +A+ +E L+D+ +T+E + + + D + +SQSG+
Sbjct: 50 AKEWLILATGSSLNAAQSAKYYIENLADVRITIEEPFNHLYYEKLSSHLDLVIGISQSGQ 109
Query: 379 TADTLQALEYASENGAL-CVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVV 437
+ T+ ALE + ++ V +T+ V S IA + I +G E TK +T+ ++
Sbjct: 110 STSTISALERVKKEASVPVVALTSDVTSEIAEFADITLDIGSGKERVGYVTKGFTATVLT 169
Query: 438 MAMLALAIGGDTISTQARR-----EAIIDGLCDLPNKVREVLKLDQEMKVLAKQLIAEQS 492
+ + L T+ R A + +P + E + + ++
Sbjct: 170 LXLTGLHFAYKTVQIDETRFNNEISAFSRAIDAIPATIAETEAFYERWQ---EEFATAPK 226
Query: 493 LLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACF 552
G G T E K E + S+G+ HGP V+ I + T A
Sbjct: 227 FTAIGYGPTVGTCKEFETKFSETVRVPSQGLDLEAFXHGPYLEVNPQHRIFFLETASAV- 285
Query: 553 SKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVEDCLQ-PVINIVPLQLL 611
+++ +++ ++ G G R + +P D Q P + I+P Q+L
Sbjct: 286 TERLVLLRDYESKYTPFTYTVKFGK------GEDDRTLVIPTDLDEYQAPFLXILPFQIL 339
Query: 612 AYHLTVLRG 620
A+H+ L+G
Sbjct: 340 AHHIAELKG 348
>pdb|3FKJ|A Chain A, Crystal Structure Of A Putative Phosphosugar Isomerase
(Stm_0572) From Salmonella Typhimurium Lt2 At 2.12 A
Resolution
pdb|3FKJ|B Chain B, Crystal Structure Of A Putative Phosphosugar Isomerase
(Stm_0572) From Salmonella Typhimurium Lt2 At 2.12 A
Resolution
Length = 347
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 105/256 (41%), Gaps = 13/256 (5%)
Query: 321 RIVFIGCGTSYNAALAARPILE-ELSDLPVTMEIASDLVDRQAPIYREDTAVFV-SQSGE 378
R+ F+GCG S + L+ E S L V +++ V +++ V + SQ G
Sbjct: 42 RVWFVGCGGSLTGFWPGKYFLDCEASKLAVGYITSNEFVHATPKALGKNSVVILASQQGN 101
Query: 379 TADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAG---AEIGVASTKAYTSQI 435
TA+T+ A A E GA +G+ + + + + + A KA S
Sbjct: 102 TAETVAAARVAREKGAATIGLVYQPDTPLCEYSDYIIEYQWARYPETVDPAQQKAAYSLW 161
Query: 436 VVMAMLALAIGGDTISTQARREAIIDGLCDLPNKVREVLKLDQE-MKVLAKQLIAEQSLL 494
+ + +LA G A+ + ++ + V + QE + A + E+ +
Sbjct: 162 LALEILAQTEG------YAQYDELVSAFGRFSDVVHGAQRQVQEDAQRFAAEWKDEKVVY 215
Query: 495 VFGRGYNYATALEGALKV-KEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFS 553
G G ++ A + ++ + E ++S I +GE HGP + + P +++ +
Sbjct: 216 XXGSGPSFGAAHQESICILLEXQWINSASIHSGEYFHGPFEITEPGTPFILLQSSGRTRP 275
Query: 554 KQQSVIQQLHARKGRL 569
I+ + +G+L
Sbjct: 276 LDDRAIRFIERYQGKL 291
>pdb|3KNZ|A Chain A, Crystal Structure Of Putative Sugar Binding Protein
(Np_459565.1) From Salmonella Typhimurium Lt2 At 2.50 A
Resolution
pdb|3KNZ|B Chain B, Crystal Structure Of Putative Sugar Binding Protein
(Np_459565.1) From Salmonella Typhimurium Lt2 At 2.50 A
Resolution
pdb|3KNZ|C Chain C, Crystal Structure Of Putative Sugar Binding Protein
(Np_459565.1) From Salmonella Typhimurium Lt2 At 2.50 A
Resolution
pdb|3KNZ|D Chain D, Crystal Structure Of Putative Sugar Binding Protein
(Np_459565.1) From Salmonella Typhimurium Lt2 At 2.50 A
Resolution
pdb|3KNZ|E Chain E, Crystal Structure Of Putative Sugar Binding Protein
(Np_459565.1) From Salmonella Typhimurium Lt2 At 2.50 A
Resolution
pdb|3KNZ|F Chain F, Crystal Structure Of Putative Sugar Binding Protein
(Np_459565.1) From Salmonella Typhimurium Lt2 At 2.50 A
Resolution
Length = 366
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 47/117 (40%)
Query: 315 TIRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIASDLVDRQAPIYREDTAVFVS 374
T R RI+ G GTSY+ AL AR + LPV + L D + V +S
Sbjct: 46 TERGVTRIILTGSGTSYHGALTARTFXQRWCALPVDVCWPFXLDDETLARSGKALVVGIS 105
Query: 375 QSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAY 431
Q G + TL A E A G + + I R + + G E A TK Y
Sbjct: 106 QGGGSLSTLAAXERARNVGHITASXAGVAPATIDRAADYILTVPCGEETAGAKTKGY 162
>pdb|1GPH|1 Chain 1, Structure Of The Allosteric Regulatory Enzyme Of Purine
Biosynthesis
pdb|1GPH|2 Chain 2, Structure Of The Allosteric Regulatory Enzyme Of Purine
Biosynthesis
pdb|1GPH|3 Chain 3, Structure Of The Allosteric Regulatory Enzyme Of Purine
Biosynthesis
pdb|1GPH|4 Chain 4, Structure Of The Allosteric Regulatory Enzyme Of Purine
Biosynthesis
Length = 465
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 91/257 (35%), Gaps = 61/257 (23%)
Query: 2 CGIFAYLNYGVNRERRYILQVLFNGLRRLEYRGYDSAGICIDDXXXXXXXXXXXXXVNGC 61
CG+F + Q+ + GL L++RG + AGI D G
Sbjct: 1 CGVFGIWGH------EEAPQITYYGLHSLQHRGQEGAGIVATDGEKLTAHKG-----QGL 49
Query: 62 PPLVFRQEGNIESLVKSVYXXXXXXXXXXXXSFSIHAGIAHTRWATHGEPAPRNSHP--- 118
VF Q G + S VK I H R+AT G N P
Sbjct: 50 ITEVF-QNGEL-SKVKG------------------KGAIGHVRYATAGGGGYENVQPLLF 89
Query: 119 --QTSGAGNEFLVVHNGVITNYEVLKETLIRHGFTFESETDTEVIPKLAKFVFDKANEEE 176
Q +G+ + HNG + N LK+ L G F++ +DTEV+ L K
Sbjct: 90 RSQNNGS---LALAHNGNLVNATQLKQQLENQGSIFQTSSDTEVLAHLIKR--------- 137
Query: 177 GDQPVTFSQVVVEVMRHLEGAYALIFKSQHY------PNELIACKRGSPLLLGVKDGAVS 230
T + + L+GAYA + ++ PN L PL +G+ A
Sbjct: 138 -SGHFTLKDQIKNSLSMLKGAYAFLIMTETEMIVALDPNGL------RPLSIGMMGDAYV 190
Query: 231 ILKFDNAKGRNGGTYAR 247
+ A G TY R
Sbjct: 191 VASETCAFDVVGATYLR 207
>pdb|1AO0|A Chain A, Glutamine Phosphoribosylpyrophosphate (Prpp)
Amidotransferase From B. Subtilis Complexed With Adp And
Gmp
pdb|1AO0|B Chain B, Glutamine Phosphoribosylpyrophosphate (Prpp)
Amidotransferase From B. Subtilis Complexed With Adp And
Gmp
pdb|1AO0|C Chain C, Glutamine Phosphoribosylpyrophosphate (Prpp)
Amidotransferase From B. Subtilis Complexed With Adp And
Gmp
pdb|1AO0|D Chain D, Glutamine Phosphoribosylpyrophosphate (Prpp)
Amidotransferase From B. Subtilis Complexed With Adp And
Gmp
Length = 459
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 91/257 (35%), Gaps = 61/257 (23%)
Query: 2 CGIFAYLNYGVNRERRYILQVLFNGLRRLEYRGYDSAGICIDDXXXXXXXXXXXXXVNGC 61
CG+F + Q+ + GL L++RG + AGI D G
Sbjct: 1 CGVFGIWGH------EEAPQITYYGLHSLQHRGQEGAGIVATDGEKLTAHKG-----QGL 49
Query: 62 PPLVFRQEGNIESLVKSVYXXXXXXXXXXXXSFSIHAGIAHTRWATHGEPAPRNSHP--- 118
VF Q G + S VK I H R+AT G N P
Sbjct: 50 ITEVF-QNGEL-SKVKG------------------KGAIGHVRYATAGGGGYENVQPLLF 89
Query: 119 --QTSGAGNEFLVVHNGVITNYEVLKETLIRHGFTFESETDTEVIPKLAKFVFDKANEEE 176
Q +G+ + HNG + N LK+ L G F++ +DTEV+ L K
Sbjct: 90 RSQNNGS---LALAHNGNLVNATQLKQQLENQGSIFQTSSDTEVLAHLIKR--------- 137
Query: 177 GDQPVTFSQVVVEVMRHLEGAYALIFKSQHY------PNELIACKRGSPLLLGVKDGAVS 230
T + + L+GAYA + ++ PN L PL +G+ A
Sbjct: 138 -SGHFTLKDQIKNSLSMLKGAYAFLIMTETEMIVALDPNGL------RPLSIGMMGDAYV 190
Query: 231 ILKFDNAKGRNGGTYAR 247
+ A G TY R
Sbjct: 191 VASETCAFDVVGATYLR 207
>pdb|3FXA|A Chain A, Crystal Structure Of A Putative Sugar-Phosphate Isomerase
(Lmof2365_0531) From Listeria Monocytogenes Str. 4b
F2365 At 1.60 A Resolution
pdb|3FXA|B Chain B, Crystal Structure Of A Putative Sugar-Phosphate Isomerase
(Lmof2365_0531) From Listeria Monocytogenes Str. 4b
F2365 At 1.60 A Resolution
pdb|3FXA|C Chain C, Crystal Structure Of A Putative Sugar-Phosphate Isomerase
(Lmof2365_0531) From Listeria Monocytogenes Str. 4b
F2365 At 1.60 A Resolution
pdb|3FXA|D Chain D, Crystal Structure Of A Putative Sugar-Phosphate Isomerase
(Lmof2365_0531) From Listeria Monocytogenes Str. 4b
F2365 At 1.60 A Resolution
Length = 201
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 6/122 (4%)
Query: 321 RIVFIGCGTSYNAALAARPILEELS--DLPVTMEIASDLVDRQAPIY-REDTAVFVSQSG 377
+IV GCGTS +AA+ ++ + + P SD V + +ED + +S+ G
Sbjct: 47 KIVVAGCGTS---GVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGG 103
Query: 378 ETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVV 437
T + L + G+ +G+T S IA++ ++ E + A S V
Sbjct: 104 NTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNXLATASTXAV 163
Query: 438 MA 439
+A
Sbjct: 164 IA 165
>pdb|3C3J|A Chain A, Crystal Structure Of Tagatose-6-Phosphate KetoseALDOSE
ISOMERASE FROM Escherichia Coli
pdb|3C3J|B Chain B, Crystal Structure Of Tagatose-6-Phosphate KetoseALDOSE
ISOMERASE FROM Escherichia Coli
pdb|3C3J|C Chain C, Crystal Structure Of Tagatose-6-Phosphate KetoseALDOSE
ISOMERASE FROM Escherichia Coli
pdb|3C3J|D Chain D, Crystal Structure Of Tagatose-6-Phosphate KetoseALDOSE
ISOMERASE FROM Escherichia Coli
pdb|3C3J|E Chain E, Crystal Structure Of Tagatose-6-Phosphate KetoseALDOSE
ISOMERASE FROM Escherichia Coli
pdb|3C3J|F Chain F, Crystal Structure Of Tagatose-6-Phosphate KetoseALDOSE
ISOMERASE FROM Escherichia Coli
Length = 384
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 117/293 (39%), Gaps = 42/293 (14%)
Query: 273 YMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLKTIRRSR--RIVFIGCGTS 330
+ ++EI QP + IR S L L + L+ + R RI+ G GTS
Sbjct: 15 WTEEEIRHQPRAW--------IR--SLTNIDALRSALNNFLEPLLRKENLRIILTGAGTS 64
Query: 331 YNAALAARPIL-----EELSDLPVTMEIASDLVDRQAPIYREDTAVFVSQSGETADTLQA 385
P L + S +P T ++ ++ D P + F +SG + +++ A
Sbjct: 65 AFIGDIIAPWLASHTGKNFSAVPTT-DLVTNPXDYLNPAHPLLLISF-GRSGNSPESVAA 122
Query: 386 LEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTK----AYTSQIVVMAML 441
+E A++ C + T A A + NA A + A T A TS I
Sbjct: 123 VELANQFVPECYHLPITCNEAGALYQNAINSDNAFALLXPAETHDRGFAXTSSITTXXAS 182
Query: 442 ALAI-GGDTISTQARREAIIDGLCDLPNKVREVLKLDQEMKVLAKQLIAEQSLLVFGRGY 500
LA+ +TI++Q R D+ ++ + +L + + ++ G G
Sbjct: 183 CLAVFAPETINSQTFR--------DVADRCQAILTSLGDFSEGVFGYAPWKRIVYLGSGG 234
Query: 501 NYATALEGALKVKEVALMHSEGILAG------EMKHGPLALVDENLPILVIAT 547
A E ALKV E+ + G LA +HGP +LVD+ ++V +
Sbjct: 235 LQGAARESALKVLEL----TAGKLAAFYDSPTGFRHGPKSLVDDETLVVVFVS 283
>pdb|1ECF|A Chain A, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase
pdb|1ECF|B Chain B, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase
pdb|1ECG|A Chain A, Don Inactivated Escherichia Coli Glutamine
Phosphoribosylpyrophosphate (Prpp) Amidotransferase
pdb|1ECG|B Chain B, Don Inactivated Escherichia Coli Glutamine
Phosphoribosylpyrophosphate (Prpp) Amidotransferase
pdb|1ECB|A Chain A, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase Complexed With 2 Gmp, 1 Mg Per
Subunit
pdb|1ECB|B Chain B, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase Complexed With 2 Gmp, 1 Mg Per
Subunit
pdb|1ECB|C Chain C, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase Complexed With 2 Gmp, 1 Mg Per
Subunit
pdb|1ECB|D Chain D, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase Complexed With 2 Gmp, 1 Mg Per
Subunit
pdb|1ECC|A Chain A, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase Complexed With Mn-Cprpp And
5-Oxo- Norleucine
pdb|1ECC|B Chain B, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase Complexed With Mn-Cprpp And
5-Oxo- Norleucine
pdb|1ECJ|A Chain A, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase Complexed With 2 Amp Per
Tetramer
pdb|1ECJ|B Chain B, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase Complexed With 2 Amp Per
Tetramer
pdb|1ECJ|C Chain C, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase Complexed With 2 Amp Per
Tetramer
pdb|1ECJ|D Chain D, Escherichia Coli Glutamine Phosphoribosylpyrophosphate
(Prpp) Amidotransferase Complexed With 2 Amp Per
Tetramer
Length = 504
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 83/213 (38%), Gaps = 37/213 (17%)
Query: 21 QVLFNGLRRLEYRGYDSAGICIDDXXXXXXXXXXXXXVNGCPPLVFRQEGNIESLVKSVY 80
Q +++ L L++RG D+AGI D N C FR LV V+
Sbjct: 14 QSIYDALTVLQHRGQDAAGIITID-------------ANNC----FRLR-KANGLVSDVF 55
Query: 81 XXXXXXXXXXXXSFSIHAGIAHTRWATHGEPAPRNSHPQTSGAGNEFLVVHNGVITNYEV 140
+ GI H R+ T G + + P + + HNG +TN
Sbjct: 56 EARHMQ------RLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHNGNLTNAHE 109
Query: 141 LKETLI----RHGFTFESETDTEVIPKLAKFVFDKANEEEGDQPVTFSQVVVEVMRHLEG 196
L++ L RH + +D+E++ + D + F+ + R + G
Sbjct: 110 LRKKLFEEKRRH---INTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAA-TNRLIRG 165
Query: 197 AYALIFKSQHYPNELIACKRGS---PLLLGVKD 226
AYA + + + ++A + + PL+LG +D
Sbjct: 166 AYACV--AMIIGHGMVAFRDPNGIRPLVLGKRD 196
>pdb|3I0Z|A Chain A, Crystal Structure Of Putative Putative
Tagatose-6-Phosphate KetoseALDOSE ISOMERASE
(NP_344614.1) FROM STREPTOCOCCUS PNEUMONIAE Tigr4 At
1.70 A Resolution
pdb|3I0Z|B Chain B, Crystal Structure Of Putative Putative
Tagatose-6-Phosphate KetoseALDOSE ISOMERASE
(NP_344614.1) FROM STREPTOCOCCUS PNEUMONIAE Tigr4 At
1.70 A Resolution
Length = 389
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 112/291 (38%), Gaps = 40/291 (13%)
Query: 276 KEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAAL 335
+EI++QP+ + A + D++K ++ G GTS
Sbjct: 20 REIYQQPDVWREAFEFYQAKREEIAAFLQEIADKHDYIK-------VILTGAGTSAYVGD 72
Query: 336 AARPILEELSD---LPVTMEIASDLVDRQAPIYREDTA---VFVSQSGETADTLQALEYA 389
P +E+ D +D+V A ++D A V ++SG + ++L ++ A
Sbjct: 73 TLLPYFKEVYDERKWNFNAIATTDIVANPATYLKKDVATVLVSFARSGNSPESLATVDLA 132
Query: 390 SE--NGALCVGITNTVGSAIARKTHCG------VHINAGAEIGVASTKAYTSQIVVMAML 441
+ V IT +A + H + + G A T ++TS +
Sbjct: 133 KSLVDELYQVTITCAADGKLALQAHGDDRNLLLLQPAVSNDAGFAXTSSFTSXXLTTL-- 190
Query: 442 ALAIGGDTISTQARREAIIDGLCDLPNKVREVLKLDQEMKVLAKQLIAEQSLLVFGRGYN 501
L + ++ R ++ L R+VL +++K L + ++ G G
Sbjct: 191 -LVFDPTEFAVKSERFEVVSSLA------RKVLDKAEDVKELVD--LDFNRVIYLGAGPF 241
Query: 502 YATALEGALKVKE-----VALMHSEGILAGEMKHGPLALVDENLPILVIAT 547
+ A E LK+ E VA + + +HGP +L+++N +LV T
Sbjct: 242 FGLAHEAQLKILELTAGQVATXYESPV---GFRHGPKSLINDNTVVLVFGT 289
>pdb|3D3Z|A Chain A, Crystal Structure Of Actibind A T2 Rnase
Length = 247
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 17/87 (19%)
Query: 172 ANEEEGDQPVTFSQVVVEVMRHLEGAYAL-----------IFKSQHYPNELIACKRGSPL 220
A EE GD F Q VV++ + L+ AL +K + L A G P
Sbjct: 132 AQEEVGD----FFQQVVDLFKTLDSYTALSDAGITPSEDATYKLSDIEDALAAIHDGYPP 187
Query: 221 LLGVKDGAVSILKFD-NAKGRN-GGTY 245
+G +DGA+S L + N KG GGTY
Sbjct: 188 YVGCEDGALSQLYYYFNVKGSAIGGTY 214
>pdb|3TBJ|A Chain A, The 1.7a Crystal Structure Of Actibind A T2 Ribonucleases
As Antitumorigenic Agents
Length = 237
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 17/87 (19%)
Query: 172 ANEEEGDQPVTFSQVVVEVMRHLEGAYAL-----------IFKSQHYPNELIACKRGSPL 220
A EE GD F Q VV++ + L+ AL +K + L A G P
Sbjct: 132 AQEEVGD----FFQQVVDLFKTLDSYTALSDAGITPSEDATYKLSDIEDALAAIHDGYPP 187
Query: 221 LLGVKDGAVSILKFD-NAKGRN-GGTY 245
+G +DGA+S L + N KG GGTY
Sbjct: 188 YVGCEDGALSQLYYYFNVKGSAIGGTY 214
>pdb|1NRI|A Chain A, Crystal Structure Of Putative Phosphosugar Isomerase
Hi0754 From Haemophilus Influenzae
Length = 306
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 366 REDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEI-- 423
+ D V ++ SG T + L+YA GAL + I + S A + G EI
Sbjct: 140 KNDVLVGIAASGRTPYVIAGLQYAKSLGALTISIASNPKSEXAEIADIAIETIVGPEILT 199
Query: 424 GVASTKAYTSQIVVMAMLALA 444
G + K+ T+Q V+ L A
Sbjct: 200 GSSRLKSGTAQKXVLNXLTTA 220
>pdb|1VZ6|A Chain A, Ornithine Acetyltransferase (Orf6 Gene Product -
Clavulanic Acid Biosynthesis) From Streptomyces
Clavuligerus
pdb|1VZ6|B Chain B, Ornithine Acetyltransferase (Orf6 Gene Product -
Clavulanic Acid Biosynthesis) From Streptomyces
Clavuligerus
pdb|1VZ7|A Chain A, Ornithine Acetyltransferase (Orf6 Gene Product -
Clavulanic Acid Biosynthesis) From Streptomyces
Clavuligerus
pdb|1VZ7|B Chain B, Ornithine Acetyltransferase (Orf6 Gene Product -
Clavulanic Acid Biosynthesis) From Streptomyces
Clavuligerus
pdb|1VZ7|C Chain C, Ornithine Acetyltransferase (Orf6 Gene Product -
Clavulanic Acid Biosynthesis) From Streptomyces
Clavuligerus
pdb|1VZ7|D Chain D, Ornithine Acetyltransferase (Orf6 Gene Product -
Clavulanic Acid Biosynthesis) From Streptomyces
Clavuligerus
Length = 393
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 14/98 (14%)
Query: 482 VLAKQLIAE---QSLLVFGRGYNYATALEGALKVKEV--ALMHSEGILAGEM-------- 528
VL ++ +A+ + ++V R N AT LEG +EV A+ + G+ GEM
Sbjct: 55 VLCREAVADGQARGVVVLARNANVATGLEGEENAREVREAVARALGLPEGEMLIASTGVI 114
Query: 529 -KHGPLALVDENLPILVIATRDACFSKQQSVIQQLHAR 565
+ P+ + E+L L + F + I R
Sbjct: 115 GRQYPMESIREHLKTLEWPAGEGGFDRAARAIMTTDTR 152
>pdb|2YEP|A Chain A, Structure Of An N-Terminal Nucleophile (Ntn) Hydrolase,
Oat2, In Complex With Glutamate
pdb|2YEP|C Chain C, Structure Of An N-Terminal Nucleophile (Ntn) Hydrolase,
Oat2, In Complex With Glutamate
pdb|2YEP|E Chain E, Structure Of An N-Terminal Nucleophile (Ntn) Hydrolase,
Oat2, In Complex With Glutamate
pdb|2YEP|G Chain G, Structure Of An N-Terminal Nucleophile (Ntn) Hydrolase,
Oat2, In Complex With Glutamate
Length = 180
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 14/98 (14%)
Query: 482 VLAKQLIAE---QSLLVFGRGYNYATALEGALKVKEV--ALMHSEGILAGEM-------- 528
VL ++ +A+ + ++V R N AT LEG +EV A+ + G+ GEM
Sbjct: 55 VLCREAVADGQARGVVVLARNANVATGLEGEENAREVREAVARALGLPEGEMLIASTGVI 114
Query: 529 -KHGPLALVDENLPILVIATRDACFSKQQSVIQQLHAR 565
+ P+ + E+L L + F + I R
Sbjct: 115 GRQYPMESIREHLKTLEWPAGEGGFDRAARAIMTTDTR 152
>pdb|2VZK|A Chain A, Structure Of The Acyl-Enzyme Complex Of An N-Terminal
Nucleophile (Ntn) Hydrolase, Oat2
pdb|2VZK|C Chain C, Structure Of The Acyl-Enzyme Complex Of An N-Terminal
Nucleophile (Ntn) Hydrolase, Oat2
pdb|2VZK|E Chain E, Structure Of The Acyl-Enzyme Complex Of An N-Terminal
Nucleophile (Ntn) Hydrolase, Oat2
pdb|2VZK|G Chain G, Structure Of The Acyl-Enzyme Complex Of An N-Terminal
Nucleophile (Ntn) Hydrolase, Oat2
pdb|2V4I|A Chain A, Structure Of A Novel N-Acyl-Enzyme Intermediate Of An N-
Terminal Nucleophile (Ntn) Hydrolase, Oat2
pdb|2V4I|C Chain C, Structure Of A Novel N-Acyl-Enzyme Intermediate Of An N-
Terminal Nucleophile (Ntn) Hydrolase, Oat2
pdb|2V4I|E Chain E, Structure Of A Novel N-Acyl-Enzyme Intermediate Of An N-
Terminal Nucleophile (Ntn) Hydrolase, Oat2
pdb|2V4I|G Chain G, Structure Of A Novel N-Acyl-Enzyme Intermediate Of An N-
Terminal Nucleophile (Ntn) Hydrolase, Oat2
Length = 173
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 14/98 (14%)
Query: 482 VLAKQLIAE---QSLLVFGRGYNYATALEGALKVKEV--ALMHSEGILAGEM-------- 528
VL ++ +A+ + ++V R N AT LEG +EV A+ + G+ GEM
Sbjct: 48 VLCREAVADGQARGVVVLARNANVATGLEGEENAREVREAVARALGLPEGEMLIASTGVI 107
Query: 529 -KHGPLALVDENLPILVIATRDACFSKQQSVIQQLHAR 565
+ P+ + E+L L + F + I R
Sbjct: 108 GRQYPMESIREHLKTLEWPAGEGGFDRAARAIMTTDTR 145
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,222,435
Number of Sequences: 62578
Number of extensions: 681228
Number of successful extensions: 1632
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1537
Number of HSP's gapped (non-prelim): 47
length of query: 636
length of database: 14,973,337
effective HSP length: 105
effective length of query: 531
effective length of database: 8,402,647
effective search space: 4461805557
effective search space used: 4461805557
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)