Query 006659
Match_columns 636
No_of_seqs 347 out of 3298
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 05:31:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006659.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006659hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bpl_A Glucosamine--fructose-6 100.0 4.5E-98 2E-102 842.0 58.8 585 2-636 1-608 (608)
2 3tbf_A Glucosamine--fructose-6 100.0 4E-67 1.4E-71 555.1 37.4 366 264-636 4-372 (372)
3 2zj3_A Glucosamine--fructose-6 100.0 2.4E-64 8E-69 535.7 36.7 368 263-636 8-375 (375)
4 2poc_A D-fructose-6- PH, isome 100.0 7.9E-64 2.7E-68 530.5 37.4 365 266-636 1-367 (367)
5 1moq_A Glucosamine 6-phosphate 100.0 7E-63 2.4E-67 524.1 35.4 365 264-636 2-368 (368)
6 3fj1_A Putative phosphosugar i 100.0 2.6E-60 9.1E-65 498.0 31.7 334 271-635 6-343 (344)
7 3hba_A Putative phosphosugar i 100.0 1.4E-59 4.8E-64 489.8 32.5 326 271-635 5-333 (334)
8 3g68_A Putative phosphosugar i 100.0 8.3E-57 2.9E-61 473.0 34.1 334 273-630 3-340 (352)
9 2aml_A SIS domain protein; 469 100.0 1.3E-56 4.3E-61 476.0 35.0 341 271-631 14-359 (373)
10 3knz_A Putative sugar binding 100.0 5.1E-57 1.8E-61 475.8 29.5 337 273-631 15-356 (366)
11 1j5x_A Glucosamine-6-phosphate 100.0 5.6E-56 1.9E-60 465.8 31.9 328 269-635 11-342 (342)
12 2e5f_A Hypothetical protein PH 100.0 3.7E-56 1.3E-60 464.2 29.5 321 273-635 2-325 (325)
13 3fkj_A Putative phosphosugar i 100.0 8.9E-55 3.1E-59 456.3 32.0 318 300-632 18-345 (347)
14 3odp_A Putative tagatose-6-pho 100.0 2.6E-55 8.8E-60 466.3 27.2 340 271-633 18-384 (393)
15 3i0z_A Putative tagatose-6-pho 100.0 7.7E-54 2.6E-58 454.4 30.5 337 271-633 15-379 (389)
16 3eua_A Putative fructose-amino 100.0 3.8E-54 1.3E-58 449.2 26.6 311 306-632 10-327 (329)
17 2a3n_A Putative glucosamine-fr 100.0 3.8E-51 1.3E-55 431.6 28.4 309 306-633 39-354 (355)
18 3c3j_A Putative tagatose-6-pho 100.0 2.1E-52 7.2E-57 445.6 18.4 345 257-631 2-369 (384)
19 1tzb_A Glucose-6-phosphate iso 100.0 9.2E-44 3.2E-48 366.8 13.2 294 273-634 3-299 (302)
20 1xff_A D-fructose-6-, glucosam 100.0 5.1E-38 1.8E-42 312.7 21.0 201 2-244 1-211 (240)
21 1ecf_A Glutamine phosphoribosy 100.0 6.2E-35 2.1E-39 320.2 20.2 216 2-250 1-237 (504)
22 1ao0_A Glutamine phosphoribosy 100.0 1E-33 3.4E-38 307.6 17.6 199 2-244 1-214 (459)
23 1te5_A Conserved hypothetical 100.0 1.3E-31 4.5E-36 268.1 3.1 176 1-216 1-185 (257)
24 3mdn_A Glutamine aminotransfer 100.0 1.3E-29 4.5E-34 255.1 13.9 204 1-244 3-244 (274)
25 1ct9_A Asparagine synthetase B 99.9 1.8E-27 6E-32 263.7 16.6 172 2-250 1-186 (553)
26 3etn_A Putative phosphosugar i 99.9 2.2E-21 7.6E-26 190.2 15.7 181 269-454 8-199 (220)
27 1ofd_A Ferredoxin-dependent gl 99.9 2.3E-21 7.8E-26 227.5 17.9 216 18-277 143-422 (1520)
28 1ea0_A Glutamate synthase [NAD 99.9 1.3E-21 4.6E-26 229.1 14.3 213 18-274 143-420 (1479)
29 3sho_A Transcriptional regulat 99.8 2.1E-19 7.2E-24 171.7 18.4 144 302-449 22-167 (187)
30 3fxa_A SIS domain protein; str 99.8 9.9E-20 3.4E-24 176.1 16.1 153 302-455 27-184 (201)
31 2xhz_A KDSD, YRBH, arabinose 5 99.8 2.7E-19 9.1E-24 170.4 16.5 144 302-447 32-180 (183)
32 1jeo_A MJ1247, hypothetical pr 99.8 4.2E-18 1.4E-22 161.6 16.8 145 302-453 23-169 (180)
33 1vim_A Hypothetical protein AF 99.8 1.9E-18 6.5E-23 166.8 13.6 144 303-451 31-183 (200)
34 1m3s_A Hypothetical protein YC 99.8 3.6E-18 1.2E-22 163.0 14.4 144 302-450 20-172 (186)
35 1nri_A Hypothetical protein HI 99.7 1.3E-17 4.4E-22 171.4 15.2 163 273-448 38-224 (306)
36 2i2w_A Phosphoheptose isomeras 99.7 3.8E-17 1.3E-21 159.2 15.3 141 271-423 23-188 (212)
37 2yva_A DNAA initiator-associat 99.7 2E-16 7E-21 152.1 17.0 135 307-446 29-187 (196)
38 1x92_A APC5045, phosphoheptose 99.7 1.4E-16 4.7E-21 153.7 15.2 131 310-446 36-191 (199)
39 2xbl_A Phosphoheptose isomeras 99.7 4.7E-16 1.6E-20 149.7 15.7 158 272-445 8-190 (198)
40 3cvj_A Putative phosphoheptose 99.6 8.5E-16 2.9E-20 153.0 9.5 138 307-446 26-208 (243)
41 1tk9_A Phosphoheptose isomeras 99.6 4.8E-15 1.6E-19 141.4 14.2 115 307-421 26-165 (188)
42 3trj_A Phosphoheptose isomeras 99.6 1.2E-14 4.2E-19 140.0 16.3 135 308-447 31-193 (201)
43 1q15_A CARA; CMPR, (2S,5S)-5-c 99.6 1.7E-16 5.9E-21 173.8 3.6 105 93-226 22-133 (503)
44 1jgt_A Beta-lactam synthetase; 99.6 9.2E-16 3.1E-20 168.3 4.2 101 102-226 40-149 (513)
45 1wiw_A Glucose-6-phosphate iso 99.5 7.9E-13 2.7E-17 133.1 16.1 216 361-631 57-285 (290)
46 3fxa_A SIS domain protein; str 99.0 2E-09 6.8E-14 103.5 11.8 154 468-625 20-184 (201)
47 3etn_A Putative phosphosugar i 99.0 4E-09 1.4E-13 102.8 13.9 145 477-625 41-200 (220)
48 1zzg_A Glucose-6-phosphate iso 99.0 8.5E-09 2.9E-13 108.8 16.7 199 305-519 52-272 (415)
49 2q8n_A Glucose-6-phosphate iso 98.9 3.6E-09 1.2E-13 113.0 12.3 200 306-519 65-298 (460)
50 3jx9_A Putative phosphoheptose 98.9 1.6E-08 5.4E-13 93.2 12.1 96 311-414 30-127 (170)
51 1m3s_A Hypothetical protein YC 98.8 5.2E-08 1.8E-12 92.2 14.8 151 468-627 13-179 (186)
52 2wu8_A Glucose-6-phosphate iso 98.6 2.7E-07 9.1E-12 100.0 12.6 189 318-519 142-356 (549)
53 2cxn_A Glucose-6-phosphate iso 98.6 1.1E-06 3.9E-11 95.3 17.0 188 319-519 149-363 (557)
54 1jeo_A MJ1247, hypothetical pr 98.5 8.2E-07 2.8E-11 83.3 13.5 139 477-625 27-171 (180)
55 3tbf_A Glucosamine--fructose-6 98.4 3.1E-06 1.1E-10 88.9 16.2 140 307-451 215-357 (372)
56 2o2c_A GPI, glucose-6-phosphat 98.4 9.9E-07 3.4E-11 96.4 12.2 188 319-519 197-416 (613)
57 3sho_A Transcriptional regulat 98.4 1.7E-06 5.9E-11 81.6 12.5 140 477-620 26-168 (187)
58 2xhz_A KDSD, YRBH, arabinose 5 98.4 2E-06 6.8E-11 80.9 12.4 150 467-620 24-183 (183)
59 1t10_A GPI, glucose-6-phosphat 98.4 2.5E-06 8.5E-11 93.1 14.3 188 319-519 196-415 (605)
60 1b0z_A Protein (phosphoglucose 98.3 7.1E-07 2.4E-11 94.9 7.8 200 307-519 59-290 (445)
61 2a3n_A Putative glucosamine-fr 98.3 6.9E-06 2.4E-10 85.8 14.1 138 477-620 39-178 (355)
62 1moq_A Glucosamine 6-phosphate 98.2 1.2E-05 4E-10 84.5 15.0 139 307-450 212-352 (368)
63 3hba_A Putative phosphosugar i 98.2 1.8E-05 6E-10 81.8 15.1 134 460-596 9-145 (334)
64 2i2w_A Phosphoheptose isomeras 98.2 1.7E-05 5.7E-10 76.5 13.0 111 480-594 54-184 (212)
65 3knz_A Putative sugar binding 98.1 3.2E-05 1.1E-09 80.9 15.5 158 460-621 17-182 (366)
66 3eua_A Putative fructose-amino 98.1 6.4E-06 2.2E-10 85.1 9.9 143 475-620 8-153 (329)
67 2zj3_A Glucosamine--fructose-6 98.1 4.5E-05 1.5E-09 80.2 16.5 140 307-451 219-360 (375)
68 2poc_A D-fructose-6- PH, isome 98.1 3.6E-05 1.2E-09 80.7 15.7 142 308-454 210-355 (367)
69 2e5f_A Hypothetical protein PH 98.1 2.7E-05 9.2E-10 80.3 14.5 132 308-451 177-311 (325)
70 3g68_A Putative phosphosugar i 98.1 2.6E-05 9E-10 81.2 14.5 157 460-621 5-167 (352)
71 3fj1_A Putative phosphosugar i 98.1 2.7E-05 9.3E-10 80.8 14.4 134 460-596 10-146 (344)
72 1x92_A APC5045, phosphoheptose 98.1 4.5E-05 1.5E-09 72.6 14.1 138 478-618 33-193 (199)
73 2aml_A SIS domain protein; 469 98.1 3.8E-05 1.3E-09 80.6 14.8 158 460-621 18-183 (373)
74 2yva_A DNAA initiator-associat 98.1 8.6E-05 2.9E-09 70.4 15.8 141 478-619 29-190 (196)
75 2bpl_A Glucosamine--fructose-6 98.1 0.00011 3.8E-09 82.2 19.0 138 308-450 453-592 (608)
76 3fkj_A Putative phosphosugar i 98.0 2.1E-05 7E-10 81.8 10.7 140 478-620 25-171 (347)
77 3odp_A Putative tagatose-6-pho 98.0 3.7E-05 1.3E-09 81.1 12.3 135 309-450 222-368 (393)
78 1vim_A Hypothetical protein AF 97.9 0.00014 4.8E-09 69.2 14.4 138 477-623 34-185 (200)
79 2xbl_A Phosphoheptose isomeras 97.9 9.9E-05 3.4E-09 70.0 12.5 136 480-618 38-193 (198)
80 3i0z_A Putative tagatose-6-pho 97.8 0.00023 7.9E-09 74.9 14.2 136 309-451 222-364 (389)
81 3trj_A Phosphoheptose isomeras 97.8 0.00049 1.7E-08 65.5 15.3 135 479-616 35-192 (201)
82 1j5x_A Glucosamine-6-phosphate 97.8 7.7E-05 2.6E-09 77.4 9.9 151 461-617 18-180 (342)
83 3ff1_A Glucose-6-phosphate iso 97.6 0.00018 6.3E-09 76.0 10.9 200 306-519 62-293 (446)
84 3cvj_A Putative phosphoheptose 97.6 0.0006 2E-08 66.9 13.9 143 480-625 32-220 (243)
85 1tk9_A Phosphoheptose isomeras 97.5 0.00093 3.2E-08 62.6 12.8 116 479-597 31-166 (188)
86 1nri_A Hypothetical protein HI 97.5 0.0016 5.3E-08 66.3 15.2 141 477-620 58-226 (306)
87 3c3j_A Putative tagatose-6-pho 97.4 0.00047 1.6E-08 72.6 9.8 131 461-594 18-163 (384)
88 3ljk_A Glucose-6-phosphate iso 96.5 0.0029 9.8E-08 68.3 6.8 188 319-519 140-354 (543)
89 4em6_D Glucose-6-phosphate iso 96.5 0.0029 9.9E-08 68.4 6.2 188 319-519 150-362 (553)
90 1tzb_A Glucose-6-phosphate iso 95.8 0.073 2.5E-06 53.7 12.7 80 489-576 36-116 (302)
91 3ujh_A Glucose-6-phosphate iso 95.7 0.012 4.2E-07 63.8 6.5 189 319-519 151-372 (567)
92 3hjb_A Glucose-6-phosphate iso 95.5 0.013 4.3E-07 63.6 5.8 188 319-519 172-385 (574)
93 3qki_A Glucose-6-phosphate iso 95.5 0.014 4.7E-07 63.6 6.0 188 319-519 166-403 (597)
94 3jx9_A Putative phosphoheptose 92.9 0.36 1.2E-05 43.9 8.7 87 478-574 26-112 (170)
95 2nap_A Protein (periplasmic ni 92.1 8 0.00028 43.6 20.7 125 364-501 164-311 (723)
96 2iv2_X Formate dehydrogenase H 90.9 3.7 0.00013 46.4 16.1 139 365-516 165-319 (715)
97 2e7z_A Acetylene hydratase AHY 86.7 2.1 7.2E-05 48.5 10.1 124 364-500 158-294 (727)
98 2q8n_A Glucose-6-phosphate iso 86.2 1.5 5.3E-05 46.5 8.0 98 478-576 66-185 (460)
99 1h0h_A Formate dehydrogenase ( 85.4 8.3 0.00028 45.2 14.6 57 365-422 183-241 (977)
100 2zkq_b 40S ribosomal protein S 84.1 15 0.0005 36.2 13.2 96 315-419 67-165 (295)
101 1vi6_A 30S ribosomal protein S 83.9 9.7 0.00033 35.5 11.4 93 318-419 67-162 (208)
102 3bch_A 40S ribosomal protein S 83.2 9.5 0.00033 36.7 11.2 96 316-419 101-198 (253)
103 3iz6_A 40S ribosomal protein S 82.7 7.5 0.00026 38.2 10.4 96 315-419 71-169 (305)
104 3u5c_A 40S ribosomal protein S 81.7 11 0.00039 36.1 11.2 94 317-419 68-164 (252)
105 2xzm_B RPS0E; ribosome, transl 80.1 4.4 0.00015 38.8 7.6 94 316-417 63-159 (241)
106 1zzg_A Glucose-6-phosphate iso 78.3 2 7E-05 44.9 5.2 114 478-594 54-182 (415)
107 3ml1_A NAPA, periplasmic nitra 77.5 40 0.0014 38.4 16.2 56 365-421 177-236 (802)
108 3j20_B 30S ribosomal protein S 75.1 15 0.00051 34.1 9.5 94 318-419 63-158 (202)
109 1pjq_A CYSG, siroheme synthase 74.3 70 0.0024 33.7 16.0 76 319-400 12-104 (457)
110 1kqf_A FDH-N alpha, formate de 71.1 20 0.00068 42.2 11.8 55 366-421 222-279 (1015)
111 1ofd_A Ferredoxin-dependent gl 68.6 7.2 0.00025 47.1 7.1 41 2-43 1-49 (1520)
112 2vpz_A Thiosulfate reductase; 67.6 13 0.00043 42.3 8.9 124 365-501 198-335 (765)
113 1eu1_A Dimethyl sulfoxide redu 66.2 25 0.00086 39.9 11.0 121 383-516 204-344 (780)
114 2ivf_A Ethylbenzene dehydrogen 63.8 43 0.0015 39.1 12.6 56 366-422 246-303 (976)
115 1ea0_A Glutamate synthase [NAD 62.6 12 0.00039 45.2 7.2 41 2-43 1-49 (1479)
116 1ti6_A Pyrogallol hydroxytrans 56.1 41 0.0014 38.7 10.5 93 389-494 238-346 (875)
117 1tmo_A TMAO reductase, trimeth 53.9 39 0.0013 38.6 9.8 105 383-500 237-361 (829)
118 3bbn_B Ribosomal protein S2; s 49.2 39 0.0013 32.0 7.2 46 366-417 157-202 (231)
119 2cxn_A Glucose-6-phosphate iso 47.7 40 0.0014 36.4 7.9 104 490-594 149-268 (557)
120 2vqe_B 30S ribosomal protein S 46.2 31 0.0011 33.2 6.1 46 366-417 158-203 (256)
121 4ffl_A PYLC; amino acid, biosy 45.9 32 0.0011 34.7 6.7 40 380-419 11-50 (363)
122 2qip_A Protein of unknown func 44.5 17 0.00057 32.5 3.8 50 366-418 108-160 (165)
123 1b0z_A Protein (phosphoglucose 43.9 30 0.001 36.4 6.1 99 478-577 59-178 (445)
124 2wu8_A Glucose-6-phosphate iso 41.8 35 0.0012 36.8 6.3 26 367-392 43-69 (549)
125 3i9v_3 NADH-quinone oxidoreduc 38.3 62 0.0021 36.7 8.1 112 307-421 324-472 (783)
126 3r8n_B 30S ribosomal protein S 34.8 47 0.0016 31.1 5.3 46 366-417 149-194 (218)
127 3dfz_A SIRC, precorrin-2 dehyd 34.0 28 0.00096 32.9 3.6 67 322-391 94-162 (223)
128 3eag_A UDP-N-acetylmuramate:L- 33.2 1.5E+02 0.005 29.4 9.1 74 318-398 3-95 (326)
129 1tif_A IF3-N, translation init 29.5 53 0.0018 25.3 3.8 44 370-413 16-62 (78)
130 3u31_A SIR2A, transcriptional 29.3 1.3E+02 0.0045 29.4 7.7 51 366-417 216-267 (290)
131 3rht_A (gatase1)-like protein; 26.5 98 0.0033 29.8 6.1 81 320-402 5-88 (259)
132 3lk7_A UDP-N-acetylmuramoylala 26.1 1.9E+02 0.0064 30.1 8.9 33 318-354 8-40 (451)
133 2zxr_A Single-stranded DNA spe 25.8 1.5E+02 0.0051 32.8 8.1 89 309-402 62-160 (666)
134 4hv4_A UDP-N-acetylmuramate--L 25.5 1.3E+02 0.0044 31.9 7.5 86 316-404 19-132 (494)
135 2o2c_A GPI, glucose-6-phosphat 25.3 67 0.0023 35.1 5.1 28 366-393 96-124 (613)
136 2r7k_A 5-formaminoimidazole-4- 24.9 1.2E+02 0.0042 30.6 6.9 51 365-418 15-68 (361)
137 2l82_A Designed protein OR32; 24.8 1.8E+02 0.0061 23.6 6.2 38 540-578 78-115 (162)
138 3dma_A Exopolyphosphatase-rela 24.6 5.3E+02 0.018 25.6 12.3 109 304-416 6-138 (343)
139 1wiw_A Glucose-6-phosphate iso 24.4 1.3E+02 0.0046 29.4 6.8 99 308-410 152-255 (290)
140 1w4r_A Thymidine kinase; type 23.9 66 0.0023 29.6 4.1 38 369-406 24-61 (195)
141 3iab_B Ribonucleases P/MRP pro 22.8 1.9E+02 0.0067 24.8 6.5 38 318-355 59-96 (140)
142 3k35_A NAD-dependent deacetyla 22.5 94 0.0032 30.9 5.2 51 365-416 205-255 (318)
143 4fhz_A Phospholipase/carboxyle 22.5 3.9E+02 0.013 25.6 9.9 82 488-572 154-241 (285)
144 1s5p_A NAD-dependent deacetyla 22.1 81 0.0028 29.8 4.5 50 367-417 168-217 (235)
145 3riy_A NAD-dependent deacetyla 21.7 83 0.0029 30.5 4.6 51 366-417 212-262 (273)
146 1qv9_A F420-dependent methylen 21.3 1.1E+02 0.0037 28.9 4.9 41 366-406 64-104 (283)
147 2pr7_A Haloacid dehalogenase/e 20.4 91 0.0031 25.5 4.2 27 380-406 21-47 (137)
148 3hn7_A UDP-N-acetylmuramate-L- 20.3 2.1E+02 0.0071 30.5 7.9 85 317-404 17-132 (524)
149 2hna_A Protein MIOC, flavodoxi 20.3 2.7E+02 0.0093 23.4 7.4 33 368-400 4-37 (147)
150 2d59_A Hypothetical protein PH 20.1 3.6E+02 0.012 22.8 8.1 82 316-401 19-109 (144)
No 1
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*
Probab=100.00 E-value=4.5e-98 Score=842.04 Aligned_cols=585 Identities=39% Similarity=0.646 Sum_probs=512.5
Q ss_pred ceEEEEEecccccchhhHHHHHHHHHHhccccCCCCcCeeEe-CCCCCCCCCCCCCCCCCCCcEEEeecccchhhhhHHH
Q 006659 2 CGIFAYLNYGVNRERRYILQVLFNGLRRLEYRGYDSAGICID-DSSSPSPLPSPSSSVNGCPPLVFRQEGNIESLVKSVY 80 (636)
Q Consensus 2 cGI~g~~~~~~~~~~~~~~~~l~~~l~~l~~RG~d~~Gi~~~-~~~~~~~~~~~~~~~~~~~~~~~k~~g~~~~l~~~~f 80 (636)
|||||+++.+ +....+..||.+|+|||||++|+++. +++ .+.++|+.|+++++.
T Consensus 1 CGI~G~~~~~------~~~~~l~~~l~~l~~RG~D~~Gi~~~~~~~---------------~~~~~k~~g~~~~l~---- 55 (608)
T 2bpl_A 1 CGIVGAIAQR------DVAEILLEGLRRLEYRGYDSAGLAVVDAEG---------------HMTRLRRLGKVQMLA---- 55 (608)
T ss_dssp CEEEEEECSS------CCHHHHHHHHHHHGGGCCSEEEEEEECTTC---------------CEEEEEEESSHHHHH----
T ss_pred CeEEEEEcCC------chHHHHHHHHHHHHhcCCCcCceEEEecCC---------------cEEEEeCCCcHHHHH----
Confidence 9999999643 24567899999999999999999998 443 799999999988754
Q ss_pred HHHhhhhhccccccccceEEEeeecCCCCCCCCCCCCCcccCCCCcEEEEEcceecChHHHHHHHHhCCCccccCCHhhH
Q 006659 81 EEVAETELNLEESFSIHAGIAHTRWATHGEPAPRNSHPQTSGAGNEFLVVHNGVITNYEVLKETLIRHGFTFESETDTEV 160 (636)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~igH~R~aT~g~~~~~n~qPf~~~~~~~~~~~hNG~i~N~~~l~~~l~~~g~~~~~~tDsE~ 160 (636)
+.+. ...+.++++|||+||+|+|.++..|+|||.. ++++++|||+|+|+.+||++|...|+.|.++||||+
T Consensus 56 ~~l~------~~~~~~~~~igH~R~at~g~~~~~n~qP~~~---~~~~lvhNG~I~N~~~Lr~~L~~~g~~f~s~tDtEv 126 (608)
T 2bpl_A 56 QAAE------EHPLHGGTGIAHTRWATHGEPSEVNAHPHVS---EHIVVVHNGIIENHEPLREELKARGYTFVSETDTEV 126 (608)
T ss_dssp HHHH------HSCCCCSEEEEEEECCCSSSCCGGGCSCEEE---TTEEEEEEECCTTHHHHHHHHHHHTCCCSCCCHHHH
T ss_pred HHhh------ccCCCCCEEEEEEccCCCCCCCccCCCCccC---CCEEEEEEEEEeCHHHHHHHHHhcCCCCCCCCHHHH
Confidence 3322 1245689999999999999888899999986 489999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHhhhhhheeEEecCCCCeEEEEEcCCceEEEecc-----Ccccccccc
Q 006659 161 IPKLAKFVFDKANEEEGDQPVTFSQVVVEVMRHLEGAYALIFKSQHYPNELIACKRGSPLLLGVKD-----GAVSILKFD 235 (636)
Q Consensus 161 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~a~~~~d~~~~~~l~~~Rd~~pL~~G~~~-----~~~~~~~~~ 235 (636)
|+++|++.+.. | .++.+++++++++|+|+|+|++||.+.+++||++||+|||++|..+ +|+..++..
T Consensus 127 i~~l~~~~~~~-g-------~~~~~av~~~~~~l~G~fa~~i~d~~~~~~l~~aRd~~PL~~g~~~~~~~~aSe~~al~~ 198 (608)
T 2bpl_A 127 IAHLVNWELKQ-G-------GTLREAVLRAIPQLRGAYGTVIMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALLP 198 (608)
T ss_dssp HHHHHHHHHTT-C-------CCHHHHHHHHGGGCCSSEEEEEEETTCTTCEEEEEEBSCCEEEECSSCEEEESSGGGTTT
T ss_pred HHHHHHHHHhc-C-------CCHHHHHHHHHHhhcCceEEEEEecCCCCEEEEEECCCceEEEEeCCeEEEEechHHHHh
Confidence 99999976532 3 5799999999999999999999998744899999999999999987 566666655
Q ss_pred ee----eccCCCe--eeC--------CCc-ccceeeeeccchhhhhcCChHHHHHHHHHhcHHHHHHHhhccccccCCcc
Q 006659 236 NA----KGRNGGT--YAR--------PAS-VQRALSILEMEVEQINKGNYEHYMQKEIHEQPESLTTTMRGRLIRGGSCK 300 (636)
Q Consensus 236 ~~----~~~~g~~--~~~--------~~~-~~~~i~~~~~~~~~~~~~~y~~~m~keI~eqp~~l~~~l~~~~~~~~~~~ 300 (636)
.+ .++||++ ... +|. ..+++....|+....+|++|+++|+|||.+||+++++++....+.
T Consensus 199 ~~~~~~~l~~G~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~m~keI~eqp~~~~~~l~~~~~~----- 273 (608)
T 2bpl_A 199 VTRRFIFLEEGDIAEITRRSVNIFDKTGAEVKRQDIESNLQYDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISH----- 273 (608)
T ss_dssp TCCEEEECCTTCEEEECSSCEEEECSSSCBCCCCCEECCSCTTTTCCTTCSSHHHHHHHTHHHHHHHHHTTSEET-----
T ss_pred cCCeEEEECCCeEEEEECCeEEEEeCCCCEeccceeeccCChhhhhcCCcHHHHHHHHHHHHHHHHHHHhhhhhc-----
Confidence 33 8999999 222 344 457888999999999999999999999999999999999765430
Q ss_pred cccccccchHH-HHHHHcCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEeeccchhcccCCCCCCcEEEEEcCCCCC
Q 006659 301 AKSVLLGGLKD-HLKTIRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIASDLVDRQAPIYREDTAVFVSQSGET 379 (636)
Q Consensus 301 ~~~l~~~~l~~-~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~t 379 (636)
..+..+.+.. ..+.+.++++|+++|+|+|+++|..+++++.++.++++.+..++++.+....++++|++|+||+||+|
T Consensus 274 -~~~~l~~~~~~~~~~i~~~~~I~i~G~G~S~~~a~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~T 352 (608)
T 2bpl_A 274 -GQVDLSELGPNADELLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGET 352 (608)
T ss_dssp -TEECCGGGCTTHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHSCCCEEEEEHHHHTTSCCCCCTTEEEEEEESSSCC
T ss_pred -CccchhhhccchhhHhcCCCEEEEEEehHHHHHHHHHHHHHHHHhCCCEEEEehhHhhccCCCCCCCCEEEEEeCCcCC
Confidence 0111222210 01446788999999999999999999999999889999999899987666667899999999999999
Q ss_pred HHHHHHHHHHHHcC-CeEEEEEcCCCCccccccCeeEEcCCCCcccccchhhHHHHHHHHHHHHHHHhcCCCCcHHHHHH
Q 006659 380 ADTLQALEYASENG-ALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISTQARREA 458 (636)
Q Consensus 380 ~e~i~al~~ak~~g-~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~~~~~~~~ 458 (636)
++++++++.||++| +++|+||++.+|+|++.||++|+++.++|..+++|++|+++++++++|+..++..++.+.+++++
T Consensus 353 ~e~l~a~~~ak~~G~a~~IaIT~~~~S~La~~ad~~l~~~~~~E~~~a~t~s~t~~l~~~~lL~~~l~~~~~~~~~~~~~ 432 (608)
T 2bpl_A 353 ADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVLLMLVAKLSKLKGLDASIEHD 432 (608)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEESSTTCHHHHHSSEEEECCCCCCCSSSCSHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEECCCCCHHHHhcCEEEEecCCceeeecchHHHHHHHHHHHHHHHHHHHhcCCChHHHHH
Confidence 99999999999999 99999999999999999999999999999999999999999999999999998877656677888
Q ss_pred HHHHHhhhHHHHHHHHhchHHHHHHHHHhcCCCeEEEEeCCCCHHHHHHHHHHHHHhccccccccccccccccccccccC
Q 006659 459 IIDGLCDLPNKVREVLKLDQEMKVLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDE 538 (636)
Q Consensus 459 ~~~~l~~l~~~~~~~~~~~~~~~~~a~~l~~~~~~~~lG~G~~~~~A~e~alKl~E~~~~~a~~~~~~Ef~HGp~~~~~~ 538 (636)
+.++|..+|+.++++++.+++++++++++.+.+.++++|+|.+||+|+|++|||+|++|+||++|+.+||+|||++++++
T Consensus 433 ~~~~l~~lp~~~~~~l~~~~~~~~la~~l~~~~~~~~lG~G~~~~~A~e~alKl~E~s~i~ae~~~a~e~~HGp~~lv~~ 512 (608)
T 2bpl_A 433 IVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDA 512 (608)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHGGGTTCCEEEEEECGGGHHHHHHHHHHHHHHHCCEEEEEEGGGGGGTGGGGCCT
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHHHHhhCCCeEEEEecCcCHHHHHHHHHHHHHhccccceeecHHHhhhchHHHcCC
Confidence 99999999999999998777899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcceEEEcCCCCcchhhHHHHHHHHHHHHHHHHH
Q 006659 539 NLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVEDCLQPVINIVPLQLLAYHLTVL 618 (636)
Q Consensus 539 ~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~q~la~~lA~~ 618 (636)
+++|++|.++++.++++.+.+++++++|+++++|+++++.... ...+..+.+|.+++.+.|+++++|+|+++|++|+.
T Consensus 513 ~~~vi~i~~~~~~~~~~~~~~~e~~~rg~~v~~i~~~~~~~~~--~~~~~~i~~p~~~~~l~pl~~~v~~Qlla~~~A~~ 590 (608)
T 2bpl_A 513 DMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVS--SDNMHIIEMPHVEEVIAPIFYTVPLQLLAYHVALI 590 (608)
T ss_dssp TCEEEEEECSSTTHHHHHHHHHHHHHTTCEEEEEEETTSCCCC--BTTEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEECCChhHHHHHHHHHHHHHcCCeEEEEECCCchhhc--ccCCcEEEcCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988899999999999999999999986522221 11346788999889999999999999999999999
Q ss_pred cCCCCCCCCCCcceeecC
Q 006659 619 RGYNVDQPRNLAKSVTTQ 636 (636)
Q Consensus 619 ~G~~pd~pr~l~k~v~~~ 636 (636)
+|+|||+||||+||||||
T Consensus 591 ~G~dpD~Pr~laKsvtve 608 (608)
T 2bpl_A 591 KGTDVDQPRNLAKSVTVE 608 (608)
T ss_dssp HTCCSSSCTTCCSCCCCC
T ss_pred hCcCCCCCCCCCeeeecC
Confidence 999999999999999998
No 2
>3tbf_A Glucosamine--fructose-6-phosphate aminotransferas [isomerizing]; structural genomics; 2.28A {Francisella tularensis subsp}
Probab=100.00 E-value=4e-67 Score=555.08 Aligned_cols=366 Identities=38% Similarity=0.606 Sum_probs=319.0
Q ss_pred hhhcCChHHHHHHHHHhcHHHHHHHhhccccccCCcccccccccch-HHHHHHHcCCCeEEEEeechhHHHHHHHHHHHH
Q 006659 264 QINKGNYEHYMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGL-KDHLKTIRRSRRIVFIGCGTSYNAALAARPILE 342 (636)
Q Consensus 264 ~~~~~~y~~~m~keI~eqp~~l~~~l~~~~~~~~~~~~~~l~~~~l-~~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~ 342 (636)
..+|++|+|||+|||+|||+++++++..+.+.. .+....+ ..+.+.+.++++|+|+|||+|+++|..+++++.
T Consensus 4 ~~~k~~~~h~m~kEI~eqP~~~~~~l~~~~~~~------~~~~~~~~~~~~~~l~~a~~I~i~G~GtS~~aa~~~~~~~~ 77 (372)
T 3tbf_A 4 SASKDGYKHYMLKEIYEQPEAVSNTILASLADG------EISLDSFDKRAKELFEKTKHICIVACGTSYNAGMTAKYWIE 77 (372)
T ss_dssp --CCTTCSSHHHHHHHTHHHHHHHHHHTTEETT------EECGGGSCSTHHHHHHSCCEEEEEECHHHHHHHHHHHHHHH
T ss_pred hhhcCCcHHHHHHHHHHHHHHHHHHHHhhhccc------chhhhhhhHHHHHHHhcCCEEEEEEechHHHHHHHHHHHHH
Confidence 567999999999999999999999998755421 1111122 123455789999999999999999999999999
Q ss_pred HhcCCcEEEeeccchhcccCCCCCCcEEEEEcCCCCCHHHHHHHHHHHHcC-CeEEEEEcCCCCccccccCeeEEcCCCC
Q 006659 343 ELSDLPVTMEIASDLVDRQAPIYREDTAVFVSQSGETADTLQALEYASENG-ALCVGITNTVGSAIARKTHCGVHINAGA 421 (636)
Q Consensus 343 ~~~~~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~~g-~~vi~IT~~~~s~La~~ad~~l~~~~~~ 421 (636)
++.++++.+..++++.+....++++|++|+||+||+|++++++++.||++| +++|+||++++|+|++.||++|.+++++
T Consensus 78 ~~~g~~~~~~~~se~~~~~~~~~~~dlvI~iS~SG~T~e~l~al~~ak~~G~a~~iaIT~~~~S~La~~aD~~l~~~~g~ 157 (372)
T 3tbf_A 78 KYAKVPCSVEIASEIRYRDNVVVDGSLFVSISQSGETADTLESLRKSKKQNYVGSMCICNVPNSSLVRESDIAFMTKAGV 157 (372)
T ss_dssp HHTCCCEEEEEHHHHTTSCCCCCTTEEEEEEESSSCCHHHHHHHHHHTTTTEEEEEEEESSSSSHHHHHSSEEEECCCCC
T ss_pred HHhCCcEEEechhHhhhcccCCCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCceEEEEcCCCCChHHHhCCEeeeecCCc
Confidence 998999999999998776667889999999999999999999999999999 9999999999999999999999999999
Q ss_pred cccccchhhHHHHHHHHHHHHHHHhcCCCC-cHHHHHHHHHHHhhhHHHHHHHHhchHHHHHHHHHhcCCCeEEEEeCCC
Q 006659 422 EIGVASTKAYTSQIVVMAMLALAIGGDTIS-TQARREAIIDGLCDLPNKVREVLKLDQEMKVLAKQLIAEQSLLVFGRGY 500 (636)
Q Consensus 422 e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~-~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~a~~l~~~~~~~~lG~G~ 500 (636)
|.++++|++|++|++++++|+..+++.++. +.+++++++++|..+|+.++++++.+++++++|+.+.+.++++++|+|+
T Consensus 158 E~~~a~Tks~t~ql~~l~lL~~~l~~~~g~~~~~~~~~~~~~l~~lp~~~~~~l~~~~~~~~~a~~~~~~~~~~~lGrG~ 237 (372)
T 3tbf_A 158 EIGVASTKAFTTQLVALAIFTLVIAKLKNSLTDQQIAKYTEELKNIRALVMGALKLDTEIDQISEYFSDKEHTIFLGRGL 237 (372)
T ss_dssp CCBSSCSHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHTHHHHHHHHHTTHHHHHHHHGGGTTCCEEEEEECTT
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHhccCCEEEEecCc
Confidence 999999999999999999999999887654 5677889999999999999999987888999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhccccccccccccccccccccccCCCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcC
Q 006659 501 NYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAAS 580 (636)
Q Consensus 501 ~~~~A~e~alKl~E~~~~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~ 580 (636)
+||+|+|+||||+|++|+||++|+.+||+|||++++++++|||+|.++|+..+++++++++++++|+++++|+.+++...
T Consensus 238 ~~~~A~E~ALKlkE~s~i~ae~~~a~E~~HGP~alid~~~pvi~~~~~d~~~~k~~~~~~e~~~rg~~vi~i~~~~~~~~ 317 (372)
T 3tbf_A 238 YYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNMPIVAVVPNDELLDKTLSNLQEVHARGGKLILFVDKAVKER 317 (372)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEEGGGTTTTTTTTCCTTCEEEEEECSSTTHHHHHHHHHHHHHTTCEEEEEEEGGGGGG
T ss_pred CHHHHHHHHHHHHHHhCcCcceeeHHHhcCccHhhcCCCCeEEEEecCCchHHHHHHHHHHHHHcCCeEEEEECCCcccc
Confidence 99999999999999999999999999999999999999999999999888889999999999999999999998664111
Q ss_pred CCCCCcceEEEcCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCCCCCcceeecC
Q 006659 581 IFPGGSCRVIEVPQVEDCLQPVINIVPLQLLAYHLTVLRGYNVDQPRNLAKSVTTQ 636 (636)
Q Consensus 581 ~~~~~~~~~~~~p~~~~~~~~~~~~v~~q~la~~lA~~~G~~pd~pr~l~k~v~~~ 636 (636)
. ....+..+.+|.+++.+.|+++++|+|+++|++|..+|+|||+||||+||||||
T Consensus 318 ~-~~~~~~~i~~p~~~~~l~pl~~~i~~Qlla~~~A~~rG~d~D~PRnLaKsVtve 372 (372)
T 3tbf_A 318 V-NFDNSIVLELDAGHDFSAPVVFTIPLQLLSYHVAIIKGTDVDQPRNLAKSVTVE 372 (372)
T ss_dssp C-CCTTCEEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHTCCCBCC----------
T ss_pred c-ccccceEEECCCCchhHhHHHHHHHHHHHHHHHHHHcCcCcCCCCCCCcccccC
Confidence 0 012457788999999999999999999999999999999999999999999998
No 3
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=100.00 E-value=2.4e-64 Score=535.71 Aligned_cols=368 Identities=59% Similarity=0.959 Sum_probs=333.1
Q ss_pred hhhhcCChHHHHHHHHHhcHHHHHHHhhccccccCCcccccccccchHHHHHHHcCCCeEEEEeechhHHHHHHHHHHHH
Q 006659 263 EQINKGNYEHYMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILE 342 (636)
Q Consensus 263 ~~~~~~~y~~~m~keI~eqp~~l~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~ 342 (636)
.+.+|++|+++|++||.|||+.+++++..+.+... +.++.+.++++++.+.++++|+++|+|+|++++..+++++.
T Consensus 8 ~~~~k~~~~~~m~kEI~eqP~~~~~~l~~~~~~~~----~~~~~~~l~~~~~~l~~~~~I~i~G~G~S~~a~~~a~~~~~ 83 (375)
T 2zj3_A 8 QQIMKGNFSSFMQKEIFEQPESVVNTMRGRVNFDD----YTVNLGGLKDHIKEIQRCRRLILIACGTSYHAGVATRQVLE 83 (375)
T ss_dssp ---CCTTSSSHHHHHHHTHHHHHHHHHTTTEETTT----TEECCGGGTTTHHHHHHCSEEEEEECHHHHHHHHHHHHHHH
T ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHhhcccc----cccCHHHHHHHHHHHhCCCEEEEEEecHHHHHHHHHHHHHH
Confidence 46789999999999999999999999977543211 34667788888888889999999999999999999999999
Q ss_pred HhcCCcEEEeeccchhcccCCCCCCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCc
Q 006659 343 ELSDLPVTMEIASDLVDRQAPIYREDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAE 422 (636)
Q Consensus 343 ~~~~~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e 422 (636)
++.++++.+..++++.+....++++|++|+||+||+|++++++++.||++|+++|+||++.+|||++.||++|.++.++|
T Consensus 84 ~l~~~~~~~~~~~d~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g~E 163 (375)
T 2zj3_A 84 ELTELPVMVELASDFLDRNTPVFRDDVCFFLSQSGETADTLMGLRYCKERGALTVGITNTVGSSISRETDCGVHINAGPE 163 (375)
T ss_dssp HHHCSCEEEEEHHHHHHTTCCCCTTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHSSEEEECCCCCC
T ss_pred HHhCCCeEEEeechHhhhccCCCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCcEEEEECCCCChHHHhCCEeeeecCCcc
Confidence 99899999988899876666778999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHhhhHHHHHHHHhchHHHHHHHHHhcCCCeEEEEeCCCCH
Q 006659 423 IGVASTKAYTSQIVVMAMLALAIGGDTISTQARREAIIDGLCDLPNKVREVLKLDQEMKVLAKQLIAEQSLLVFGRGYNY 502 (636)
Q Consensus 423 ~~~~~t~s~~~~~~~l~lL~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~a~~l~~~~~~~~lG~G~~~ 502 (636)
.++++|++|+++++++++|+..++..++...+++.++.++|..+|+.++++++.+++++++|+++.+.+.++++|+|++|
T Consensus 164 ~~~a~t~s~ta~l~~l~~L~~~l~~~~~~~~~~~~~~~~~l~~l~~~~~~~l~~~~~~~~~a~~~~~~~~~~~lG~G~~~ 243 (375)
T 2zj3_A 164 IGVASTKAYTSQFVSLVMFALMMCDDRISMQERRKEIMLGLKRLPDLIKEVLSMDDEIQKLATELYHQKSVLIMGRGYHY 243 (375)
T ss_dssp CCSSCSHHHHHHHHHHHHHHHHHTTTCGGGHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHTTCSEEEEEECGGGH
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhCCCCEEEEccCCCH
Confidence 99999999999999999999999887765466778899999999999999998778899999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccccccccccccccccccCCCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCC
Q 006659 503 ATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIF 582 (636)
Q Consensus 503 ~~A~e~alKl~E~~~~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~ 582 (636)
++|+|+||||+|++|+||++|+.+||+|||+++++++++||+|.++|+..+++++++++++++|+++++|+++++....
T Consensus 244 ~~A~E~aLKl~E~s~i~ae~~~~~E~~HGp~ali~~~~~vi~l~~~~~~~~~~~~~~~e~~~rg~~v~~i~~~~~~~~~- 322 (375)
T 2zj3_A 244 ATCLEGALKIKEITYMHSEGILAGELKHGPLALVDKLMPVIMIIMRDHTYAKCQNALQQVVARQGRPVVICDKEDTETI- 322 (375)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEEGGGGGGTGGGGCSTTSCEEEEECSSTTHHHHHHHHHHHHHTTCCCEEEEETTCHHHH-
T ss_pred HHHHHHHHHHHHHhhhccccccHHHhccCcHHHcCCCCeEEEEECCChhHHHHHHHHHHHHHcCCeEEEEECCCchhhh-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987532110
Q ss_pred CCCcceEEEcCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCCCCCcceeecC
Q 006659 583 PGGSCRVIEVPQVEDCLQPVINIVPLQLLAYHLTVLRGYNVDQPRNLAKSVTTQ 636 (636)
Q Consensus 583 ~~~~~~~~~~p~~~~~~~~~~~~v~~q~la~~lA~~~G~~pd~pr~l~k~v~~~ 636 (636)
...+..+.+|.+++.+.|+++++|+|+++|++|+.+|+|||+||||+||||||
T Consensus 323 -~~~~~~i~~p~~~~~l~pl~~~v~~Qlla~~~A~~~G~dpd~PrnLaKsvtve 375 (375)
T 2zj3_A 323 -KNTKRTIKVPHSVDCLQGILSVIPLQLLAFHLAVLRGYDVDFPRNLAKSVTVE 375 (375)
T ss_dssp -HHCSSEEEECCCCTTTHHHHHTHHHHHHHHHHHHHTTCCSSSCTTCCSCCCCC
T ss_pred -hccCcEEEcCCCchhHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeecC
Confidence 01236788998889999999999999999999999999999999999999998
No 4
>2poc_A D-fructose-6- PH, isomerase domain of glutamine-fructose-6-phosphat transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=100.00 E-value=7.9e-64 Score=530.51 Aligned_cols=365 Identities=58% Similarity=0.947 Sum_probs=308.9
Q ss_pred hcCChHHHHHHHHHhcHHHHHHHhhccccccCCcccccccccchHHHHHHHcCCCeEEEEeechhHHHHHHHHHHHHHhc
Q 006659 266 NKGNYEHYMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELS 345 (636)
Q Consensus 266 ~~~~y~~~m~keI~eqp~~l~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~ 345 (636)
+|++|++||++||.|||+++++++..+.+... +.++.+.+.++++.|.++++|+++|+|+|++++..+++++.++.
T Consensus 1 ~k~~~~~~m~kEI~eqP~~~~~~l~~~~~~~~----~~~~~~~l~~~~~~l~~~~~I~i~G~G~S~~~~~~a~~~~~~l~ 76 (367)
T 2poc_A 1 MKGPYKHFMQKEIFEQPDSAFNTMRGRIDFEN----CVVTLGGLKSWLSTIRRCRRIIMIACGTSYHSCLATRSIFEELT 76 (367)
T ss_dssp --CCCSSHHHHHHHTHHHHHHHHHTTTEETTT----TEECCTTTGGGHHHHHTSSEEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhhhcccc----cccCHHHHHHHHHHHhCCCEEEEEEecHHHHHHHHHHHHHHHHh
Confidence 47899999999999999999999987643211 24566778888888999999999999999999999999999998
Q ss_pred CCcEEEeeccchhcccCCCCCCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCcccc
Q 006659 346 DLPVTMEIASDLVDRQAPIYREDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGV 425 (636)
Q Consensus 346 ~~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~ 425 (636)
++++.+..++++.+....++++|++|+||+||+|++++++++.||++|+++|+||++++|||++.||++|.++.++|..+
T Consensus 77 ~~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g~E~~~ 156 (367)
T 2poc_A 77 EIPVSVELASDFLDRRSPVFRDDTCVFVSQSGETADSILALQYCLERGALTVGIVNSVGSSMSRQTHCGVHINAGPEIGV 156 (367)
T ss_dssp CSCEEEEEHHHHHHTTCCCCTTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSTTSHHHHHSSEEEECCCCCCCSS
T ss_pred CCCeEEEehhhhHhhccCCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChHHHhCCEEEEcCCCCcccc
Confidence 99999988899877666778999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHhhhHHHHHHHHhchHHHHHHHHH-hcCCCeEEEEeCCCCHHH
Q 006659 426 ASTKAYTSQIVVMAMLALAIGGDTISTQARREAIIDGLCDLPNKVREVLKLDQEMKVLAKQ-LIAEQSLLVFGRGYNYAT 504 (636)
Q Consensus 426 ~~t~s~~~~~~~l~lL~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~a~~-l~~~~~~~~lG~G~~~~~ 504 (636)
++|++|+++++++++|+..++..++...+++.++.++|..+|+.++++++.+++++++|++ +.+.+.++++|+|++||+
T Consensus 157 a~t~s~t~~l~~l~~L~~~l~~~~~~~~~~~~~~~~~l~~lp~~~~~~l~~~~~~~~~a~~~~~~~~~~~~lG~G~~~~~ 236 (367)
T 2poc_A 157 ASTKAYTSQYIALVMFALSLSNDSISRKGRHEEIIKGLQKIPEQIKQVLKLENKIKDLCNSSLNDQKSLLLLGRGYQFAT 236 (367)
T ss_dssp SCSHHHHHHHHHHHHHHHHHTTTBSTTHHHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHHSGGGGCSEEEEEECGGGHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhccCCcEEEEcCCCChHH
Confidence 9999999999999999999998876556778889999999999999999877889999999 999999999999999999
Q ss_pred HHHHHHHHHHhccccccccccccccccccccccCCCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCC
Q 006659 505 ALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPG 584 (636)
Q Consensus 505 A~e~alKl~E~~~~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~ 584 (636)
|+|++|||+|++|+||++|+.+||+|||+++++++++|++|.++|+..+++++++++++++|+++++|+++++.... .
T Consensus 237 A~e~alKl~E~s~i~ae~~~a~E~~HGp~~lv~~~~~vi~i~~~~~~~~~~~~~~~e~~~rg~~v~~i~~~~~~~~~--~ 314 (367)
T 2poc_A 237 ALEGALKIKEISYMHSEGVLAGELKHGILALVDEDLPIIAFATRDSLFPKVMSAIEQVTARDGRPIVICNEGDAIIS--N 314 (367)
T ss_dssp HHHHHHHHHHHHCCEEEEEETTCC-----------CCEEEECCGGGCCHHHHHHHHHHHHTTCCCEEEEETTCCSCC---
T ss_pred HHHHHHHHHHHhccccccccHHHhccchHhhccCCCcEEEEEcCChhHHHHHHHHHHHHHcCCeEEEEECCCchhhh--c
Confidence 99999999999999999999999999999999999999999998889999999999999999999999986543221 0
Q ss_pred Ccc-eEEEcCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCCCCCcceeecC
Q 006659 585 GSC-RVIEVPQVEDCLQPVINIVPLQLLAYHLTVLRGYNVDQPRNLAKSVTTQ 636 (636)
Q Consensus 585 ~~~-~~~~~p~~~~~~~~~~~~v~~q~la~~lA~~~G~~pd~pr~l~k~v~~~ 636 (636)
..+ ..+.+|.+++.+.|+++++|+|+++|++|..+|+|||+||||+||||||
T Consensus 315 ~~~~~~i~~p~~~~~l~pl~~~~~~Qlla~~~A~~~G~dpd~prnlaKsvtve 367 (367)
T 2poc_A 315 DKVHTTLEVPETVDCLQGLLNVIPLQLISYWLAVNRGIDVDFPRNLAKSVTVE 367 (367)
T ss_dssp --CCEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHTTCCCC------------
T ss_pred cCCccEEEeCCCchhHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeeeC
Confidence 122 6788999889999999999999999999999999999999999999998
No 5
>1moq_A Glucosamine 6-phosphate synthase; glutamine amidotransferase; HET: GLP MES; 1.57A {Escherichia coli} SCOP: c.80.1.1 PDB: 1mor_A* 1mos_A*
Probab=100.00 E-value=7e-63 Score=524.06 Aligned_cols=365 Identities=40% Similarity=0.661 Sum_probs=327.7
Q ss_pred hhhcCChHHHHHHHHHhcHHHHHHHhhccccccCCcccccccccch-HHHHHHHcCCCeEEEEeechhHHHHHHHHHHHH
Q 006659 264 QINKGNYEHYMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGL-KDHLKTIRRSRRIVFIGCGTSYNAALAARPILE 342 (636)
Q Consensus 264 ~~~~~~y~~~m~keI~eqp~~l~~~l~~~~~~~~~~~~~~l~~~~l-~~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~ 342 (636)
..+|++|++||++||.|||+.+++++..+... ..++.+.+ .++++.+.++++|+++|+|+|+++|..+++++.
T Consensus 2 ~~~k~~~~~~m~keI~eqP~~~~~~l~~~~~~------~~~~~~~~~~~~~~~i~~~~~I~i~G~G~S~~~a~~~~~~l~ 75 (368)
T 1moq_A 2 AGDKGIYRHYMQKEIYEQPNAIKNTLTGRISH------GQVDLSELGPNADELLSKVEHIQILACGTSYNSGMVSRYWFE 75 (368)
T ss_dssp -CCCTTCSSHHHHHHHTHHHHHHHHHTTSEET------TEECCGGGCSSHHHHHHHCCEEEEEECHHHHHHHHHHHHHHH
T ss_pred CCccCCCccHHHHHHHHHHHHHHHHHHhhhcc------CcccHHHHHHHHHHHHhCCCEEEEEEchHHHHHHHHHHHHHH
Confidence 35689999999999999999999999875531 12233344 345667888999999999999999999999999
Q ss_pred HhcCCcEEEeeccchhcccCCCCCCcEEEEEcCCCCCHHHHHHHHHHHHcC-CeEEEEEcCCCCccccccCeeEEcCCCC
Q 006659 343 ELSDLPVTMEIASDLVDRQAPIYREDTAVFVSQSGETADTLQALEYASENG-ALCVGITNTVGSAIARKTHCGVHINAGA 421 (636)
Q Consensus 343 ~~~~~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~~g-~~vi~IT~~~~s~La~~ad~~l~~~~~~ 421 (636)
++.++++.+..++++.+....++++|++|+||+||+|++++++++.||++| +++|+||++.+|+|++.||++|.++.++
T Consensus 76 ~~~~~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~G~a~viaIT~~~~S~La~~ad~~l~~~~~~ 155 (368)
T 1moq_A 76 SLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGT 155 (368)
T ss_dssp HHSCCCEEEEEHHHHHTSCCCCCTTEEEEEEESSSCCHHHHHHHHHHTTTTCSEEEEEESSTTCHHHHHSSEEEECCCCC
T ss_pred HHhCCceEEEehhhHhhhcCCCCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCCeEEEEECCCCChHHHhCCEEEEcCCCC
Confidence 988899988888888766566789999999999999999999999999999 9999999999999999999999999999
Q ss_pred cccccchhhHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHhhhHHHHHHHHhchHHHHHHHHHhcCCCeEEEEeCCCC
Q 006659 422 EIGVASTKAYTSQIVVMAMLALAIGGDTISTQARREAIIDGLCDLPNKVREVLKLDQEMKVLAKQLIAEQSLLVFGRGYN 501 (636)
Q Consensus 422 e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~a~~l~~~~~~~~lG~G~~ 501 (636)
|..++.|++|+++++++++|+..++..++.+.++++++.++|..+|+.++++++.+++++++|+++.+.++++++|+|.+
T Consensus 156 e~~~a~t~s~~~~l~~l~~L~~~l~~~~~~~~~~~~~~~~~l~~l~~~~~~~l~~~~~~~~~a~~~~~~~~~~~lG~G~~ 235 (368)
T 1moq_A 156 EIGVASTKAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQ 235 (368)
T ss_dssp CCSSSCSHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHTTCSEEEEEECGGG
T ss_pred eecccchhhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 98889999999999999999999987766556778889999999999999999767789999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccccccccccccccccccCCCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCC
Q 006659 502 YATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASI 581 (636)
Q Consensus 502 ~~~A~e~alKl~E~~~~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~ 581 (636)
||+|+|++|||+|++|+||++++.+||+|||+++++++++||+|.++|+..+++.+++++++++|+++++|++++.....
T Consensus 236 ~~~A~E~aLKl~E~~~i~ae~~~~~E~~HGp~~lv~~~~~vi~~~~~~~~~~~~~~~~~e~~~~g~~v~~i~~~~~~~~~ 315 (368)
T 1moq_A 236 YPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVS 315 (368)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEGGGGGGTGGGGCSTTSCEEEESCCHHHHHHHHHHHHHTGGGTCCEEEEEEGGGCCCC
T ss_pred HHHHHHHHHHHHHHhccccccccHHHhccCcHHHcCCCceEEEEEcCCchHHHHHHHHHHHHHcCCeEEEEECCCcchhc
Confidence 99999999999999999999999999999999999999999999998888889999999999999999999986532211
Q ss_pred CCCCcceEEEcCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCCCCCcceeecC
Q 006659 582 FPGGSCRVIEVPQVEDCLQPVINIVPLQLLAYHLTVLRGYNVDQPRNLAKSVTTQ 636 (636)
Q Consensus 582 ~~~~~~~~~~~p~~~~~~~~~~~~v~~q~la~~lA~~~G~~pd~pr~l~k~v~~~ 636 (636)
...+..+.+|.+++.+.|+++++|+|+++|++|..+|+|||+||||+||||||
T Consensus 316 --~~~~~~i~~p~~~~~l~pl~~~v~~qlla~~~A~~~G~dpd~pr~laK~vtve 368 (368)
T 1moq_A 316 --SDNMHIIEMPHVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE 368 (368)
T ss_dssp --BTTEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHHTCCSSSCTTCCSCCCCC
T ss_pred --ccCCceEEcCCCchhHHHHHHHHHHHHHHHHHHHHcCcCCCCCCCCCceeeeC
Confidence 12356788998889999999999999999999999999999999999999998
No 6
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=2.6e-60 Score=498.04 Aligned_cols=334 Identities=27% Similarity=0.360 Sum_probs=287.0
Q ss_pred HHHHHHHHHhcHHHHHHHhhccccccCCcccccccccchHHHHHHH--cCCCeEEEEeechhHHHHHHHHHHHHHhcCCc
Q 006659 271 EHYMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLKTI--RRSRRIVFIGCGTSYNAALAARPILEELSDLP 348 (636)
Q Consensus 271 ~~~m~keI~eqp~~l~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~l--~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~ 348 (636)
.++|++||.|||+.+++++..... .++++++.+ .++++|+|+|||+|+++|..++++++++.+++
T Consensus 6 ~~~m~kEI~eqP~~~~~~l~~~~~-------------~~~~~~~~~~~~~~~~I~i~G~G~S~~aa~~~~~~l~~~~g~~ 72 (344)
T 3fj1_A 6 ITRMRREIDEIPEAVQRLLDHGAQ-------------DVARVAAVLRLRDPSFVATVARGSSDHVCTYLSYAAELLLGLP 72 (344)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHCCSEEEEECCTHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHH-------------HHHHHHHHHhhCCCCEEEEEEechHHHHHHHHHHHHHHHhCCc
Confidence 458999999999999999876432 245555555 78999999999999999999999999988999
Q ss_pred EEEeeccchh-cccCCCCCCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCcccccc
Q 006659 349 VTMEIASDLV-DRQAPIYREDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVAS 427 (636)
Q Consensus 349 ~~~~~~~e~~-~~~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~~~ 427 (636)
+.+..+.... +..+..+++|++|++|+||+|+|++++++.||++|+++|+||++++|||++.||++|.+++++|.++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g~E~~va~ 152 (344)
T 3fj1_A 73 VASLGPSVASVYDARLRLDRALCLAVSQSGKSPDIVAMTRNAGRDGALCVALTNDAASPLAGVSAHTIDIHAGPELSVAA 152 (344)
T ss_dssp EEECCTHHHHTTCCCCCCTTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHTSSEEEECCCCCCCSTTC
T ss_pred EEEecchHHhhhcccCCCCCcEEEEEcCCCCCHHHHHHHHHHHHCCCcEEEEECCCCChHHHhcCEeeecCCCCcccccc
Confidence 9886655443 334457899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHhhhHHHHHHHHhchHHHHHHHHHhcCCCeEEEEeCCCCHHHHHH
Q 006659 428 TKAYTSQIVVMAMLALAIGGDTISTQARREAIIDGLCDLPNKVREVLKLDQEMKVLAKQLIAEQSLLVFGRGYNYATALE 507 (636)
Q Consensus 428 t~s~~~~~~~l~lL~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~a~~l~~~~~~~~lG~G~~~~~A~e 507 (636)
|++|+++++++++|+..++.. +++.+++.++|+.++++++. .++++++.+.+.++++++|+|++||+|+|
T Consensus 153 Tksft~ql~~l~~l~~~~~~~--------~~~~~~l~~lp~~~~~~l~~--~~~~~a~~~~~~~~~~~lG~G~~~~~A~E 222 (344)
T 3fj1_A 153 TKTFVTSAVAGLMLLADWAED--------DGLRAALGNLPETLAAASRI--DWPEMRVAIGARPSLFTLGRGTSLAVSNE 222 (344)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC--------HHHHHHHHTHHHHHHHHHTC--CCHHHHHHHHHSCCEEEEECGGGHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhch--------HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhCCCcEEEEECCCCHHHHHH
Confidence 999999999999988877643 45778899999999998864 25678888889999999999999999999
Q ss_pred HHHHHHHhccccccccccccccccccccccCCCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcc
Q 006659 508 GALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSC 587 (636)
Q Consensus 508 ~alKl~E~~~~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~ 587 (636)
+||||+|++|+||++|+.+||+|||+++++++++||+|.++|+.++++++++++++++|+++++|+.++.. +
T Consensus 223 ~ALKlkE~s~i~ae~~~~~E~~HGP~ali~~~~~vi~~~~~~~~~~~~~~~~~e~~~~g~~v~~i~~~~~~--------~ 294 (344)
T 3fj1_A 223 AALKFKETCQLHAESYSSAEVLHGPVSIVEEGFPVLGFAAGDAAEAPLAEIADQIAAKGATVFATTGRVTR--------A 294 (344)
T ss_dssp HHHHHHHHHCCCEEEEETTTGGGSSSCHHHHTCCEEECCCSSTTHHHHHHHHHHHHHTTCCEEESSTTCSS--------S
T ss_pred HHHHHHHHhccCceeecHHhhccchHhhhcCCceEEEEecCCchHHHHHHHHHHHHHcCCeEEEEeCCCCC--------c
Confidence 99999999999999999999999999999999999999999999999999999999999999999876532 1
Q ss_pred eEEE-cCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCCCCCcceeec
Q 006659 588 RVIE-VPQVEDCLQPVINIVPLQLLAYHLTVLRGYNVDQPRNLAKSVTT 635 (636)
Q Consensus 588 ~~~~-~p~~~~~~~~~~~~v~~q~la~~lA~~~G~~pd~pr~l~k~v~~ 635 (636)
..+. +|.+++.+.|+++++|+|+++|++|..+|+|||+||||+|||.+
T Consensus 295 ~~i~~~~~~~~~~~pl~~~~~~Qlla~~~a~~~G~d~D~Pr~l~KVt~t 343 (344)
T 3fj1_A 295 RVLEHVRSGHALTDPLSLIVSFYSMVEAFASERGIDPDAPRHLNKVTET 343 (344)
T ss_dssp EECCCCCCSSTTTHHHHHHHHHHHHHHHHHHHTTCCCC-----------
T ss_pred ceEEeCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCccceeee
Confidence 2334 36688899999999999999999999999999999999999865
No 7
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=100.00 E-value=1.4e-59 Score=489.76 Aligned_cols=326 Identities=24% Similarity=0.389 Sum_probs=271.9
Q ss_pred HHHHHHHHHhcHHHHHHHhhccccccCCcccccccccchHHHHHHH--cCCCeEEEEeechhHHHHHHHHHHHHHhcCCc
Q 006659 271 EHYMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLKTI--RRSRRIVFIGCGTSYNAALAARPILEELSDLP 348 (636)
Q Consensus 271 ~~~m~keI~eqp~~l~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~l--~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~ 348 (636)
.+||+|||.|||+.+++++.... +.++++++.+ .++++|+|+|||+|+++|..+++++.+..+++
T Consensus 5 ~~~M~kEI~eqP~~~~~~l~~~~-------------~~~~~~~~~i~~~~~~~I~i~G~G~S~~aa~~~~~~l~~~~g~~ 71 (334)
T 3hba_A 5 NTIMEQEARTAPQKIAEQLLAND-------------AITESLGSVLREFKPKFVMIVGRGSSDHAGVFAKYLFEIEASIP 71 (334)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHCCSCEEEESSGGGCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhH-------------HHHHHHHHHHHhCCCCEEEEEEechHHHHHHHHHHHHHHHhCCc
Confidence 45899999999999999987532 2355666666 78999999999999999999999999977999
Q ss_pred EEEeeccchh-cccCCCCCCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCcccccc
Q 006659 349 VTMEIASDLV-DRQAPIYREDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVAS 427 (636)
Q Consensus 349 ~~~~~~~e~~-~~~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~~~ 427 (636)
+.+..+.... +......++|++|++|+||+|++++++++.||++|+++|+||++++|+|++.||++|.+++++|.++++
T Consensus 72 v~~~~~~~~~~~~~~~~~~~dl~i~iS~SG~T~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~g~E~~va~ 151 (334)
T 3hba_A 72 TFAAAPSVASVYGKTLKLAGGLVIVISQSGRSPDILAQARMAKNAGAFCVALVNDETAPIKDIVDVVIPLRAGEEKAVAA 151 (334)
T ss_dssp EEECCHHHHHTSCCCCCCTTCEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSGGGGTSSEEEECCCCCCCSSSC
T ss_pred EEEEcchHHHHhcccCCCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCcEEEEeCCCCChHHHhcCEeeeecCCCcccccc
Confidence 9887665543 334456899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHhhhHHHHHHHHhchHHHHHHHHHhcCCCeEEEEeCCCCHHHHHH
Q 006659 428 TKAYTSQIVVMAMLALAIGGDTISTQARREAIIDGLCDLPNKVREVLKLDQEMKVLAKQLIAEQSLLVFGRGYNYATALE 507 (636)
Q Consensus 428 t~s~~~~~~~l~lL~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~a~~l~~~~~~~~lG~G~~~~~A~e 507 (636)
|++|+++++++++|+..++.. +++.+++..+|+.++++++. .++++++.+.+.++++++|+|++||+|+|
T Consensus 152 Tksft~~l~~l~~l~~~~~~~--------~~~~~~l~~lp~~~~~~l~~--~~~~~a~~~~~~~~~~~lG~G~~~~~A~E 221 (334)
T 3hba_A 152 TKSYLATLSALLQVAAKWTQN--------ESLVEAVNSLPQALQAAVDA--EPQLRAGSLTDVKNLVVLGRGFGYAVSKE 221 (334)
T ss_dssp SHHHHHHHHHHHHHHHHHHCC--------HHHHHHHHHHHHHHHHHHHS--CCSCCGGGTTTCCEEEEEECTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhccH--------HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhCCCeEEEEeCCcCHHHHHH
Confidence 999999999999888777542 35677889999999998854 23457888899999999999999999999
Q ss_pred HHHHHHHhccccccccccccccccccccccCCCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcc
Q 006659 508 GALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSC 587 (636)
Q Consensus 508 ~alKl~E~~~~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~ 587 (636)
+||||+|++|+||++|+.+||+|||+++++++++||+|.++|+.++++++++++++++|+++++|+.++
T Consensus 222 ~ALKlkE~~~i~ae~~~~~E~~HGP~alv~~~~~vi~~~~~~~~~~~~~~~~~e~~~~g~~v~~i~~~~----------- 290 (334)
T 3hba_A 222 IALKLKEVCAIHAEAFSSAEFLHGPVTLVEKKLSILDVCIRDESYGSHVEQIANVKQRGANLIHLHQTS----------- 290 (334)
T ss_dssp HHHHHHHHHCCEEEEEETTTCC-----------CEEEEECCSTTHHHHHHHHHHHHHTTCCEEEEECSC-----------
T ss_pred HHHHHHHHcCcceEEecHHhhccchHHhcCCCceEEEEecCchhHHHHHHHHHHHHHcCCeEEEEECCC-----------
Confidence 999999999999999999999999999999999999999999999999999999999999999998643
Q ss_pred eEEEcCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCCCCCcceeec
Q 006659 588 RVIEVPQVEDCLQPVINIVPLQLLAYHLTVLRGYNVDQPRNLAKSVTT 635 (636)
Q Consensus 588 ~~~~~p~~~~~~~~~~~~v~~q~la~~lA~~~G~~pd~pr~l~k~v~~ 635 (636)
|.+++++.|+++++|+|+++|++|+.+|+|||+||||+|||.+
T Consensus 291 -----~~~~~~l~pl~~~v~~Qlla~~~A~~rG~d~D~Pr~l~KVt~t 333 (334)
T 3hba_A 291 -----ADIHPRIAPLALLQRFYIDVAAVAIALGINPDKPAGLKKVTQT 333 (334)
T ss_dssp -----TTSCTTTHHHHHHHHHHHHHHHHHHHTTCCTTC----------
T ss_pred -----CCcchhHhhHHHHHHHHHHHHHHHHHhCcCCCCCCCCceeeee
Confidence 4456899999999999999999999999999999999999865
No 8
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=100.00 E-value=8.3e-57 Score=472.97 Aligned_cols=334 Identities=20% Similarity=0.288 Sum_probs=298.5
Q ss_pred HHHHHHHhcHHHHHHHhhccccccCCcccccccccchHHHHHHHcCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEe
Q 006659 273 YMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTME 352 (636)
Q Consensus 273 ~m~keI~eqp~~l~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~ 352 (636)
.|++||.|||+.+++++..+.... +.+ ...++++|+|+|+|+|+++|..+++++.++.++++.+.
T Consensus 3 ~M~keI~eqP~~~~~~l~~~~~~~----------~~~-----~~~~~~~I~i~G~G~S~~~a~~~~~~l~~~~g~~~~~~ 67 (352)
T 3g68_A 3 TIQDYMLETPVRMREIISNADSLF----------NEV-----KRTNLKKIIITGSGTSYHSGVQVQPYLQNLLDIDVVKM 67 (352)
T ss_dssp CHHHHHHTHHHHHHHHHHHHHHHT----------TTG-----GGSCCSEEEEECSHHHHHHHHHHHHHHHHHCSSEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHhhHHhh----------hHh-----hhcCCCEEEEEEeehHHHHHHHHHHHHHHHhCCcEEEE
Confidence 399999999999999987643211 111 14689999999999999999999999999889999999
Q ss_pred eccchhcccCCCC-CCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCcccccchhhH
Q 006659 353 IASDLVDRQAPIY-REDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAY 431 (636)
Q Consensus 353 ~~~e~~~~~~~~~-~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~~~t~s~ 431 (636)
.++++.+....+. ++|++|+||+||+|++++++++.||++|+++|+||++++|+|++.||++|.+++++|.++++|++|
T Consensus 68 ~~se~~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~ga~~iaIT~~~~S~La~~aD~~l~~~~g~E~~va~tksf 147 (352)
T 3g68_A 68 YPFMITEDTFKFDNENTLVVGVSQGGSSYSTYNAMKLAEDKGCKIASMAGCKNALIDEISDYILTVNCGEEKSGAKTKGY 147 (352)
T ss_dssp CGGGCCGGGGSSCCTTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSTTCGGGGGCSEECCCCCCCCCCSSCSHHH
T ss_pred cchhhhhcccCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeCCCCChHHHhCCEEEEeCCCCCccccccHHH
Confidence 9999976655666 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCC-cHHHHHHHHHHHhhhHHHHHHHHhc-hHHHHHHHHHhcCCCeEEEEeCCCCHHHHHHHH
Q 006659 432 TSQIVVMAMLALAIGGDTIS-TQARREAIIDGLCDLPNKVREVLKL-DQEMKVLAKQLIAEQSLLVFGRGYNYATALEGA 509 (636)
Q Consensus 432 ~~~~~~l~lL~~~~~~~~~~-~~~~~~~~~~~l~~l~~~~~~~~~~-~~~~~~~a~~l~~~~~~~~lG~G~~~~~A~e~a 509 (636)
+++++++++|+..++..++. ..+++++++++|..+++.+.++++. +++++++++.+.+.++++++|+|++||+|+|+|
T Consensus 148 ~~ql~~l~~La~~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~lGrG~~~~~A~E~A 227 (352)
T 3g68_A 148 YCTKLNLMLLGLQIAREKGIISSEKYNEEINKILDAINRFEAVYKLSKQWIERNKEKLVNSKEIRIIGHSDIYGDTLEAA 227 (352)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHTCCEEEEEECGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeCCCCHHHHHHHH
Confidence 99999999999999987654 5677888999999999999999976 678999999999999999999999999999999
Q ss_pred HHHHHhccccccccccccccccccccccCCCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcceE
Q 006659 510 LKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRV 589 (636)
Q Consensus 510 lKl~E~~~~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~ 589 (636)
||++|++++||++|+.+||+|||+++++++++||+|.+++.. +..+++++++++|+++++|++++.. .+..
T Consensus 228 LKlkE~s~i~ae~~~a~E~~HGP~alid~~~pvi~~~~~~~~--~~~~~~~~~~~~g~~v~~i~~~~~~-------~~~~ 298 (352)
T 3g68_A 228 LKLLETMRIPVTGYEFEEFIHGIYNAINSDSTIFILDTGKEP--RVTKMIDVLSGWTENVFAIGRDVTE-------NDKN 298 (352)
T ss_dssp HHHHHHHCSCEEEEEHHHHHTTGGGGCCTTEEEEEEECSCCT--THHHHHHHHHTTCSCEEEEESSCCC-------STTC
T ss_pred HHHHHHhcccccccchhhccccchheeCCCceEEEEECCchH--HHHHHHHHHHHcCCeEEEEecCCCC-------Ccee
Confidence 999999999999999999999999999999999999986543 3566778889999999999986532 1345
Q ss_pred EEcCC-CCcchhhHHHHHHHHHHHHHHHHHcCCCCCCCCCCc
Q 006659 590 IEVPQ-VEDCLQPVINIVPLQLLAYHLTVLRGYNVDQPRNLA 630 (636)
Q Consensus 590 ~~~p~-~~~~~~~~~~~v~~q~la~~lA~~~G~~pd~pr~l~ 630 (636)
+.+|. .++.+.|+++++|+|+|+|++|+.+|+|||+|||..
T Consensus 299 ~~~p~~~~~~~~pl~~~v~~Qlla~~~A~~~G~d~D~Pr~~~ 340 (352)
T 3g68_A 299 LKIDITDNPYYQTFNFIVPIQLICGEIPTLRGVDPSVPKDTR 340 (352)
T ss_dssp EECCCCSCTTGGGGTTTHHHHHHHHHSGGGGTCCTTSCSCTT
T ss_pred EEeCCCCchhHhHHHHHHHHHHHHHHHHHHhCcCCCCCCCcc
Confidence 77885 467899999999999999999999999999999975
No 9
>2aml_A SIS domain protein; 46906266, LMO0035 protein, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=100.00 E-value=1.3e-56 Score=475.98 Aligned_cols=341 Identities=19% Similarity=0.242 Sum_probs=309.1
Q ss_pred HHHHHHHHHhcHHHHHHHhhccccccCCcccccccccchHHHHHHHcC-CCeEEEEeechhHHHHHHHHHHHHHhcCCcE
Q 006659 271 EHYMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLKTIRR-SRRIVFIGCGTSYNAALAARPILEELSDLPV 349 (636)
Q Consensus 271 ~~~m~keI~eqp~~l~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~l~~-~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~ 349 (636)
+|||++||.|||+.+++++..+. +.++++++.+.+ +++|+++|+|+|+++|..+++++.++.++++
T Consensus 14 ~h~m~kEI~eqp~~~~~~~~~~~-------------~~l~~~~~~i~~~~~~I~i~G~G~S~~~a~~~~~~l~~~~g~~v 80 (373)
T 2aml_A 14 KPTMMTYINEEEEMCRVILADFQ-------------TNAEKLESLVKNGAKEWLILATGSSLNAAQSAKYYIENLADVRI 80 (373)
T ss_dssp CCCHHHHHTTHHHHHHHHHHHHH-------------HHHHHHHTTCTTCCCEEEEEECHHHHHHHHHHHHHHHHHSSCEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHccCCEEEEEEecHHHHHHHHHHHHHHHHhCCcE
Confidence 56899999999999999987532 245667776555 8999999999999999999999999888999
Q ss_pred EEeeccchhcccCCCCCCcEEEEEcCCCCCHHHHHHHHHHHHc-CCeEEEEEcCCCCccccccCeeEEcCCCCcccccch
Q 006659 350 TMEIASDLVDRQAPIYREDTAVFVSQSGETADTLQALEYASEN-GALCVGITNTVGSAIARKTHCGVHINAGAEIGVAST 428 (636)
Q Consensus 350 ~~~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~~-g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~~~t 428 (636)
.+..++++.+....++++|++|++|+||+|++++++++.||++ |+++|+||++.+|+|++.||++|.++.++|.+++.|
T Consensus 81 ~~~~~~~~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~~Ga~vIaIT~~~~S~La~~ad~~l~~~~~~E~~~~~t 160 (373)
T 2aml_A 81 TIEEPFNHLYYEKLSSHLDLVIGISQSGQSTSTISALERVKKEASVPVVALTSDVTSEIAEFADITLDIGSGKERVGYVT 160 (373)
T ss_dssp EEECHHHHHHHCCCCTTCCEEEEECSSSCBHHHHHHHHHHHHHCCCCEEEEESCTTSGGGGGCSEEEECSCCCCCSSSCS
T ss_pred EEECchhHHHhccCCCCCCEEEEEcCCCCCHHHHHHHHHHHHhCCCcEEEEECCCCChHHHhcCcceecCCCcccccccc
Confidence 9988888876656688999999999999999999999999999 999999999999999999999999999999889999
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCC-cHHHHHHHHHHHhhhHHHHHHHHhc-hHHHHHHHHHhcCCCeEEEEeCCCCHHHHH
Q 006659 429 KAYTSQIVVMAMLALAIGGDTIS-TQARREAIIDGLCDLPNKVREVLKL-DQEMKVLAKQLIAEQSLLVFGRGYNYATAL 506 (636)
Q Consensus 429 ~s~~~~~~~l~lL~~~~~~~~~~-~~~~~~~~~~~l~~l~~~~~~~~~~-~~~~~~~a~~l~~~~~~~~lG~G~~~~~A~ 506 (636)
++|+++++.+++|+..++..++. ..+++++++++|+.+|+.++++++. +++++++|+++.+.++++++|+|++||+|+
T Consensus 161 ~s~ts~~~~l~ll~~~l~~~~g~~~~~~~~~~~~~l~~l~~~~~~~l~~~~~~~~~~a~~~~~~~~~~~lG~G~~~~~A~ 240 (373)
T 2aml_A 161 KGFTATVLTLMLTGLHFAYKTVQIDETRFNNEISAFSRAIDAIPATIAETEAFYERWQEEFATAPKFTAIGYGPTVGTCK 240 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCCEEEEECTTHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCCcEEEEeCCCCHHHHH
Confidence 99999999999999988876653 4457788899999999999999986 568999999999999999999999999999
Q ss_pred HHHHHHHHhccccccccccccccccccccccCCCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCc
Q 006659 507 EGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGS 586 (636)
Q Consensus 507 e~alKl~E~~~~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~ 586 (636)
|+||||+|++++||++++.+||+|||+++++++++||+|.++|+..+++++++++++++|+++++|++++.. .
T Consensus 241 E~aLKl~E~s~i~a~~~~~~E~~HGp~ali~~~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~~i~~~~~~-------~ 313 (373)
T 2aml_A 241 EFETKFSETVRVPSQGLDLEAFMHGPYLEVNPQHRIFFLETASAVTERLVLLRDYESKYTPFTYTVKFGKGE-------D 313 (373)
T ss_dssp HHHHHHHHHTCSCEEEEEHHHHTTTGGGGCCTTCEEEEEECCSTTHHHHHHHHHHHTTTCSCEEEEEESCCS-------S
T ss_pred HHHHHHHHHhhhhceeccHHHhccccHHhcCCCCeEEEEECCCchHHHHHHHHHHHHHcCCcEEEEECCCCC-------C
Confidence 999999999999999999999999999999999999999998888899999999999999999999986411 1
Q ss_pred ceEEEcC-CCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCCCCCcc
Q 006659 587 CRVIEVP-QVEDCLQPVINIVPLQLLAYHLTVLRGYNVDQPRNLAK 631 (636)
Q Consensus 587 ~~~~~~p-~~~~~~~~~~~~v~~q~la~~lA~~~G~~pd~pr~l~k 631 (636)
+..+.+| .+++.+.|+++++|+|+++|++|+.+|+|||+|||+++
T Consensus 314 ~~~i~ip~~~~~~l~pl~~~v~~Qlla~~~A~~~G~dpd~Pr~~~~ 359 (373)
T 2aml_A 314 DRTLVIPTDLDEYQAPFLMILPFQILAHHIAELKGNKLTERIYTDF 359 (373)
T ss_dssp TTEEEECSCCCTTTTHHHHTHHHHHHHHHHHHHTTCCTTSCCSTTH
T ss_pred CcEEEcCCCCcchHHHHHHHHHHHHHHHHHHHHhCcCCCCCCCcch
Confidence 2467788 57889999999999999999999999999999999986
No 10
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=100.00 E-value=5.1e-57 Score=475.84 Aligned_cols=337 Identities=22% Similarity=0.277 Sum_probs=281.2
Q ss_pred HHHHHHHhcHHHHHHHhhc-cccccCCcccccccccchHHHHH-HHcCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEE
Q 006659 273 YMQKEIHEQPESLTTTMRG-RLIRGGSCKAKSVLLGGLKDHLK-TIRRSRRIVFIGCGTSYNAALAARPILEELSDLPVT 350 (636)
Q Consensus 273 ~m~keI~eqp~~l~~~l~~-~~~~~~~~~~~~l~~~~l~~~~~-~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~ 350 (636)
...|||.|||+.+++++.. +.+ .++.+.. .+.++++|+|+|||+|+++|..+++++.++.++++.
T Consensus 15 ~~~kEI~eqP~~l~~~l~~~~~~-------------~~~~~~~~~~~~a~~I~i~G~GtS~~aa~~~~~~~~~~~g~~~~ 81 (366)
T 3knz_A 15 LYFQGMNETPLRLLEMLTQTRED-------------LWRAAQALTERGVTRIILTGSGTSYHGALTARTFMQRWCALPVD 81 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCHH-------------HHHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHHHTSCEE
T ss_pred hHHHHHHHHHHHHHHHHHHhHHH-------------HHHHHHHHHhcCCCEEEEEEechHHHHHHHHHHHHHHHHCCCeE
Confidence 4779999999999999976 321 1233322 468899999999999999999999999998899999
Q ss_pred EeeccchhcccCCCCCCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCcccccchhh
Q 006659 351 MEIASDLVDRQAPIYREDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKA 430 (636)
Q Consensus 351 ~~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~~~t~s 430 (636)
+..++++.+....++++|++|++|+||+|++++++++.||++|+++|+||++++|||++.||++|.+++++|.++++|++
T Consensus 82 ~~~~se~~~~~~~~~~~dlvI~iS~SGeT~e~l~a~~~ak~~Ga~~IaIT~~~~S~La~~aD~~l~~~~g~E~~~a~tks 161 (366)
T 3knz_A 82 VCWPFMLDDETLARSGKALVVGISQGGGSLSTLAAMERARNVGHITASMAGVAPATIDRAADYILTVPCGEETAGAKTKG 161 (366)
T ss_dssp EECGGGCCHHHHHHSCSEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSSSCGGGGGCSEECCCCCCC------CTH
T ss_pred EEcchHHHhhccCCCCCCEEEEEcCCCCCHHHHHHHHHHHHcCCCEEEEECCCCChhhhhcCEEEecCCCccccccccHH
Confidence 99999986655456899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCC-cHHHHHHHHHHHhhhHHHHHHHHhc-hHHHHHHHHHhcCCCeEEEEeCCCCHHHHHHH
Q 006659 431 YTSQIVVMAMLALAIGGDTIS-TQARREAIIDGLCDLPNKVREVLKL-DQEMKVLAKQLIAEQSLLVFGRGYNYATALEG 508 (636)
Q Consensus 431 ~~~~~~~l~lL~~~~~~~~~~-~~~~~~~~~~~l~~l~~~~~~~~~~-~~~~~~~a~~l~~~~~~~~lG~G~~~~~A~e~ 508 (636)
|++|++++++|+..++..++. +.+++++++++|..+++.+.++++. +++++++++.+.+.++++++|+|++||+|+|+
T Consensus 162 ~tsql~~l~lLa~~l~~~~g~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~~lGrG~~~~~A~Eg 241 (366)
T 3knz_A 162 YHCTVLNLMLLALAVAGQQQRLDGEQRRSLLLRMEKTFNHLPALVTASQAWAQTNALALRDSADIRLTGPATLFGTVQEG 241 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHTCSEEEEEECGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCCCCHHHHHHH
Confidence 999999999999999887654 5677889999999999999999976 66899999999999999999999999999999
Q ss_pred HHHHHHhccccccccccccccccccccccCCCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcce
Q 006659 509 ALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCR 588 (636)
Q Consensus 509 alKl~E~~~~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~ 588 (636)
||||+|++++||++|+.+||+|||++++++++|||+|.+++. .+..+++++++++|+++++|+.++.. .+.
T Consensus 242 ALKlkE~s~i~ae~~~a~E~~HGP~alid~~~pvi~~~~~~~--~~~~~~~~~l~~~g~~vi~i~~~~~~-------~~~ 312 (366)
T 3knz_A 242 ALKMLETLRCPVSGYEFEEFIHGIYNAFNAQSALIMLDPQPD--ARQDRLAQILGEWTPSIYRIGPQVEN-------NGL 312 (366)
T ss_dssp HHHHHHHHCSCEEEEEHHHHHHTHHHHCCTTEEEEEECSSCC--HHHHHHHHHHHHHCSCEEEEESSSCC-------SSS
T ss_pred HHHHHHHhcccceeechhhcCcCchhhhCCCceEEEEecCch--HHHHHHHHHHHHcCCeEEEEecCCCc-------cce
Confidence 999999999999999999999999999999999999998654 45677888999999999999876532 234
Q ss_pred EEEcCC-CCcchhhHHHHHHHHHHHHHHHHHcCCCCCCCCCCcc
Q 006659 589 VIEVPQ-VEDCLQPVINIVPLQLLAYHLTVLRGYNVDQPRNLAK 631 (636)
Q Consensus 589 ~~~~p~-~~~~~~~~~~~v~~q~la~~lA~~~G~~pd~pr~l~k 631 (636)
.+.+|. .++.+.|+++++|+|+|+|++|+.+|+|||+|||...
T Consensus 313 ~~~~p~~~~~~l~pl~~~v~~Qllay~~A~~rG~d~D~PR~~~f 356 (366)
T 3knz_A 313 NLNFPFVNDEDFAVFEYIIPLQMLCAILPPQKGINPAIPKDPQF 356 (366)
T ss_dssp SEECCCCCCTTTTHHHHHHHHHHHHHHCC---------------
T ss_pred eEEeCCCCchHHHHHHHHHHHHHHHHHHHHHhCcCCCCCCCcch
Confidence 567886 4678999999999999999999999999999999753
No 11
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=100.00 E-value=5.6e-56 Score=465.83 Aligned_cols=328 Identities=23% Similarity=0.344 Sum_probs=285.0
Q ss_pred ChHHHHHHHHHhcHHHHHHHhhccccccCCcccccccccchHHHHH--HHcCCCeEEEEeechhHHHHHHHHHHHHHhcC
Q 006659 269 NYEHYMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLK--TIRRSRRIVFIGCGTSYNAALAARPILEELSD 346 (636)
Q Consensus 269 ~y~~~m~keI~eqp~~l~~~l~~~~~~~~~~~~~~l~~~~l~~~~~--~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~ 346 (636)
..+|||++||.|||+.+++++..++.. . .. +++++ .+.++++|+++|+|+|+++|..+++++.+..+
T Consensus 11 ~~~~~m~keI~eqP~~~~~~~~~~~~~-~---------~~-~~~~~~~~l~~~~~I~i~G~G~S~~~a~~~~~~l~~~~g 79 (342)
T 1j5x_A 11 HHMSKTLKEITDQKNELKKFFENFVLN-L---------EK-TEIFSEIQKNLTDEVLFVGCGSSYNLALTISYYFERVLK 79 (342)
T ss_dssp ---CHHHHHHHHHHHTHHHHHHHTGGG-T---------TC-------C----CCEEEEEESTHHHHHHHHHHHHHHHHHC
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhhcc-c---------ch-HHHHHHHHhCCCCEEEEEEchHHHHHHHHHHHHHHHhhC
Confidence 346789999999999999999874421 0 11 33443 46789999999999999999999999999778
Q ss_pred CcEEEeeccchhcccCCCCCC-cEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCcccc
Q 006659 347 LPVTMEIASDLVDRQAPIYRE-DTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGV 425 (636)
Q Consensus 347 ~~~~~~~~~e~~~~~~~~~~~-dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~ 425 (636)
+++.+..++++.+....+.++ |++|++|+||+|++++++++.||++|+++|+||++.+|+|++.||++|.++. +|.++
T Consensus 80 ~~v~~~~~~~~~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~Ga~vIaIT~~~~S~La~~ad~~l~~~~-~e~~~ 158 (342)
T 1j5x_A 80 IRTKAIPAGEVAFQKIPDLEERGLAFLFSRTGNTTEVLLANDVLKKRNHRTIGITIEEESRLAKESDLPLVFPV-REEAI 158 (342)
T ss_dssp CEEEEEEHHHHHTTCSCCCCSSEEEEEECSSSCCHHHHHHHHHHHHTTEEEEEEESCTTSHHHHHSSEEEECCC-CCCSS
T ss_pred CeEEEECchHHHhcCcccCCCCeEEEEEcCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHhcCEEEEcCC-Cccee
Confidence 999998888885555567788 9999999999999999999999999999999999999999999999999988 88888
Q ss_pred cchhhHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHhhhHHHHHHHHhchHHHHHHH-HHhcCCCeEEEEeCCCCHHH
Q 006659 426 ASTKAYTSQIVVMAMLALAIGGDTISTQARREAIIDGLCDLPNKVREVLKLDQEMKVLA-KQLIAEQSLLVFGRGYNYAT 504 (636)
Q Consensus 426 ~~t~s~~~~~~~l~lL~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~a-~~l~~~~~~~~lG~G~~~~~ 504 (636)
+.|++++++++++++|+..++.... +++..+|+.++++++. .+++++ +++.+.+.++++|+|.+||+
T Consensus 159 a~t~s~~~~l~~l~~L~~~l~~~~~----------~~l~~l~~~~~~~l~~--~~~~~a~~~l~~~~~~~~lG~G~~~~~ 226 (342)
T 1j5x_A 159 VMTKSFSMILLSLMFLADKIAGNST----------ERFSELVGYSPEFFDI--SWKVIEKIDLKEHDHFVFLGMSEFFGV 226 (342)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHTCCC----------HHHHHHHHHHHHHHHH--HHHHHHTSCGGGCCEEEEECCTHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHhhhHH----------HHHHHHHHHHHHHHHH--HHHHHHHHHhcCCCeEEEEcCCCCHHH
Confidence 8999999999999999999876532 5677788888888854 478888 88889999999999999999
Q ss_pred HHHHHHHHHHhccccccccccccccccccccccCCCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCC
Q 006659 505 ALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPG 584 (636)
Q Consensus 505 A~e~alKl~E~~~~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~ 584 (636)
|+|++|||+|++++||++++.+||+|||+++++++++|++|.++| .++++.+++++++++|+++++|++++
T Consensus 227 A~e~aLKl~E~s~i~a~~~~~~E~~HGp~~~v~~~~~vi~~~~~~-~~~~~~~~~~~~~~~g~~v~~i~~~~-------- 297 (342)
T 1j5x_A 227 SLESALKCIEMSLTFSEAYSTLEYRHGPKALVKKGTLVFMQKVSG-MDEQEKRLRKELESLGATVLEVGEGG-------- 297 (342)
T ss_dssp HHHHHHHHHHHHCCEEEEECGGGGGTTGGGGCCTTEEEEEECCTT-CHHHHHHHHHHHHHTTCEEEEESTTS--------
T ss_pred HHHHHHHHHHHhhhheeeccHHHhcCCchhhhCCCceEEEEECCc-hHHHHHHHHHHHHHcCCeEEEEecCC--------
Confidence 999999999999999999999999999999999999999999988 99999999999999999999998643
Q ss_pred CcceEEEcCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCCCCCcceeec
Q 006659 585 GSCRVIEVPQVEDCLQPVINIVPLQLLAYHLTVLRGYNVDQPRNLAKSVTT 635 (636)
Q Consensus 585 ~~~~~~~~p~~~~~~~~~~~~v~~q~la~~lA~~~G~~pd~pr~l~k~v~~ 635 (636)
.+.+| .+ +++|+++++|+|+++|++|..+|+|||+||||+||||+
T Consensus 298 ----~i~~p-~~-~l~pl~~~v~~qlla~~~A~~~G~dpd~pr~l~k~vt~ 342 (342)
T 1j5x_A 298 ----DIPVS-ND-WKSAFLRTVPAQILGYQKAISRGISPDKPPHLEKTVVL 342 (342)
T ss_dssp ----SBCCC-CS-GGGGGGTTHHHHHHHHHHHHHHTCCTTSCTTCCSSCCC
T ss_pred ----eEeec-HH-HHHHHHHHHHHHHHHHHHHHHhCcCCCCCCCcceEEeC
Confidence 13456 44 89999999999999999999999999999999999995
No 12
>2e5f_A Hypothetical protein PH0510; structural genomics, sugar binding protein, NPPSFA, national on protein structural and functional analyses; 1.35A {Pyrococcus horikoshii} PDB: 2dec_A* 2df8_A 2cb0_A*
Probab=100.00 E-value=3.7e-56 Score=464.24 Aligned_cols=321 Identities=24% Similarity=0.333 Sum_probs=288.3
Q ss_pred HHHHHHHhcHHHHHHHhhccccccCCcccccccccchHHHHHHHcCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEe
Q 006659 273 YMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTME 352 (636)
Q Consensus 273 ~m~keI~eqp~~l~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~ 352 (636)
.|++||.|||+.+++ ... .++++++.+.++++|+++|+|+|+++|..+++++.++.++++. .
T Consensus 2 ~m~keI~eqP~~~~~--~~~---------------~~~~~~~~l~~~~~I~i~G~G~S~~~a~~~~~~l~~~~g~~v~-~ 63 (325)
T 2e5f_A 2 KTLIEIKQTPDGIIK--ADK---------------VFNKVKDKISLPNRILYLGCGSSHFLSKLLAMVTNMHGGLGIA-L 63 (325)
T ss_dssp CHHHHHTTHHHHHHH--HHH---------------HHHHHTTTCCCCSEEEEEESTHHHHHHHHHHHHHHHTTSEEEE-E
T ss_pred chHHHHHHHHHHHHH--cCc---------------cHHHHHHHHhCCCEEEEEEChHHHHHHHHHHHHHHHHhCCCEE-E
Confidence 489999999999998 221 1455666788999999999999999999999999997788888 6
Q ss_pred eccchhcccCCCCCC--cEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCcccccchhh
Q 006659 353 IASDLVDRQAPIYRE--DTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKA 430 (636)
Q Consensus 353 ~~~e~~~~~~~~~~~--dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~~~t~s 430 (636)
.++++.+....++++ |++|++|+||+|++++++++.|| +++|+||++ +|+|++.||++|.++. +|.+++.|++
T Consensus 64 ~~se~~~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak---a~viaIT~~-~S~La~~ad~~l~~~~-~e~~~a~t~s 138 (325)
T 2e5f_A 64 PCSEFLYSKETYPIGEVELAVGISRSGETTEILLALEKIN---VKKLGITTR-ESSLTRMCDYSLVVPA-IEESVVMTHS 138 (325)
T ss_dssp EHHHHHHHGGGSCCCSCSEEEEECSSSCCHHHHHHHHTCC---SCEEEEESS-SCHHHHHSSEEEECCC-CCCSSSCCHH
T ss_pred echHHhhcCcccCCCCCeEEEEEeCCCCCHHHHHHHHHhC---CCEEEEECC-CCHHHHhcCEEEecCC-ccceecccHH
Confidence 777776655567899 99999999999999999999999 999999999 9999999999999988 8888999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHhhhHHHHHHHHhchHHHHHHHHHhcCCCeEEEEeCCCCHHHHHHHHH
Q 006659 431 YTSQIVVMAMLALAIGGDTISTQARREAIIDGLCDLPNKVREVLKLDQEMKVLAKQLIAEQSLLVFGRGYNYATALEGAL 510 (636)
Q Consensus 431 ~~~~~~~l~lL~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~a~~l~~~~~~~~lG~G~~~~~A~e~al 510 (636)
|+++++++++|+..++... + +++.++|+.++++++.+++++++|+++.+ ++++++|+|.+||+|+|++|
T Consensus 139 ~~~~l~~l~~L~~~~~~~~---------~-~~l~~l~~~~~~~l~~~~~~~~~a~~~~~-~~~~~lG~G~~~~~A~E~aL 207 (325)
T 2e5f_A 139 FTSFYFAYLQLLRYSYGLP---------P-LNAGEISKATEKSLEYERYIREIVESFDF-QNIIFLGSGLLYPVALEASL 207 (325)
T ss_dssp HHHHHHHHHHHHHHHTTCC---------C-CCHHHHHHHHHHHHTTHHHHHHHHHHCCC-SEEEEEECTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH---------H-HHHHHHHHHHHHHHcChHHHHHHHHHhcC-CCEEEEccCCCHHHHHHHHH
Confidence 9999999999999887541 2 45778899999988876789999999999 99999999999999999999
Q ss_pred HHHHhccccccccccccccccccccccCCCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCc-ceE
Q 006659 511 KVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGS-CRV 589 (636)
Q Consensus 511 Kl~E~~~~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~-~~~ 589 (636)
||+|++|+||++++.+||+|||+++++++++||+|. |..++++.+.+++++++|+++++|++++. . .. +..
T Consensus 208 Kl~E~~~i~a~~~~~~E~~HGp~~li~~~~~vi~~~--~~~~~~~~~~~~e~~~~g~~v~~i~~~~~-~-----~~~~~~ 279 (325)
T 2e5f_A 208 KMKEMSIFWSEAYPTFEVRHGFKAIADEKTLVVLMV--EEPFEWHEKLVKEFKNQGAKVLVISNSPQ-D-----LGQDYS 279 (325)
T ss_dssp HHHHHHCCEEEEEEGGGGGTTGGGGCSTTEEEEEEE--SSCCHHHHHHHHHHHHTTCEEEEEESCCC-C-----CSCSEE
T ss_pred HHHHHHHHHhhhcCHHHhhhccHhhcCCCCeEEEEe--CchHHHHHHHHHHHHHcCCeEEEEeCCcc-c-----ccCCcE
Confidence 999999999999999999999999999999999999 66778899999999999999999997642 1 12 366
Q ss_pred EEcCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCCCCCcceeec
Q 006659 590 IEVPQVEDCLQPVINIVPLQLLAYHLTVLRGYNVDQPRNLAKSVTT 635 (636)
Q Consensus 590 ~~~p~~~~~~~~~~~~v~~q~la~~lA~~~G~~pd~pr~l~k~v~~ 635 (636)
+.+|..++.+.|+++++|+|+++|++|..+|+|||+||||+|||||
T Consensus 280 ~~~p~~~~~l~pl~~~~~~qlla~~~a~~~G~dpd~pr~l~k~vt~ 325 (325)
T 2e5f_A 280 IELPRLSKDANPIPYLPIVQLLSYYKAVSRGLNPDNPRFLDKVVRW 325 (325)
T ss_dssp EECCCCCTTTTTTTHHHHHHHHHHHHHHHTTCCTTSCTTCCSSCCC
T ss_pred EEeCCCchhHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCceeeC
Confidence 8889888999999999999999999999999999999999999997
No 13
>3fkj_A Putative phosphosugar isomerases; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=100.00 E-value=8.9e-55 Score=456.28 Aligned_cols=318 Identities=17% Similarity=0.280 Sum_probs=280.0
Q ss_pred ccccccccchHHHHHHHc---CCCeEEEEeechhHHHHHHHHHHHHHhc-CCcEEEeeccchhcccC-CCCCCcEEEEEc
Q 006659 300 KAKSVLLGGLKDHLKTIR---RSRRIVFIGCGTSYNAALAARPILEELS-DLPVTMEIASDLVDRQA-PIYREDTAVFVS 374 (636)
Q Consensus 300 ~~~~l~~~~l~~~~~~l~---~~~~I~i~G~G~S~~aa~~~~~~~~~~~-~~~~~~~~~~e~~~~~~-~~~~~dlvI~iS 374 (636)
|.+.++.++++++++.|. ++++|+|+|||+|+++|..+++++.++. ++++.+..++++.+... .++++|++|+||
T Consensus 18 t~~~l~~~~i~~~~~~i~~~~~a~~I~i~G~GtS~~aa~~~~~~l~~~~~g~~~~~~~~~e~~~~~~~~l~~~dlvI~iS 97 (347)
T 3fkj_A 18 QGMSVAHENARRIISDILGKQNIERVWFVGCGGSLTGFWPGKYFLDCEASKLAVGYITSNEFVHATPKALGKNSVVILAS 97 (347)
T ss_dssp CCCCHHHHHHHHHHHHHHTTSCCCEEEEEESTHHHHTTHHHHHHHHHHCSSCEEEEEEHHHHHHSCCTTCSTTEEEEEEE
T ss_pred HHhhcCHHHHHHHHHHHHhhCCCCEEEEEEehHHHHHHHHHHHHHHHHhCCCeEEEeCcHHHHhhCcCCCCCCCEEEEEe
Confidence 457888999999999999 9999999999999999999999999987 89999999999876544 578999999999
Q ss_pred CCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCC---CcccccchhhHHHHHHHHHHHHHHHhcCCCC
Q 006659 375 QSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAG---AEIGVASTKAYTSQIVVMAMLALAIGGDTIS 451 (636)
Q Consensus 375 ~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~---~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~ 451 (636)
+||+|++++++++.||++|+++|+||++++|+|++.||++|.++++ +|.++ .|++|+. +++|++.++..++
T Consensus 98 ~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g~g~~e~~~-~t~~~~~----l~llal~l~~~~~- 171 (347)
T 3fkj_A 98 QQGNTAETVAAARVAREKGAATIGLVYQPDTPLCEYSDYIIEYQWARYPETVDP-AQQKAAY----SLWLALEILAQTE- 171 (347)
T ss_dssp SSSCCHHHHHHHHHHHHHTCEEEEEESSTTCHHHHTCSEEEECBCCCTTSCCCG-GGBHHHH----HHHHHHHHHHHHT-
T ss_pred CCCCcHHHHHHHHHHHHCCCcEEEEeCCCCChHHhhcCeEEEeccCCCCCccch-hHHHHHH----HHHHHHHHHHHhC-
Confidence 9999999999999999999999999999999999999999999998 55554 8888763 3344444443332
Q ss_pred cHHHHHHHHHHHhhhHHHHHHHHhc-hHHHHHHHHHhcCCCeEEEEeCCCCHHHHHHHH-HHHHHhcccccccccccccc
Q 006659 452 TQARREAIIDGLCDLPNKVREVLKL-DQEMKVLAKQLIAEQSLLVFGRGYNYATALEGA-LKVKEVALMHSEGILAGEMK 529 (636)
Q Consensus 452 ~~~~~~~~~~~l~~l~~~~~~~~~~-~~~~~~~a~~l~~~~~~~~lG~G~~~~~A~e~a-lKl~E~~~~~a~~~~~~Ef~ 529 (636)
..++++++.++|..+|+.++++++. +++++++|+++.+.++++++|+|++||+|+|+| |||+|++|+||++|+.+||+
T Consensus 172 ~~~~~~~~~~~l~~lp~~~~~~l~~~~~~~~~~a~~~~~~~~~~~lGrG~~~~~A~E~A~LKlkE~s~i~ae~~~a~E~~ 251 (347)
T 3fkj_A 172 GYAQYDELVSAFGRFSDVVHGAQRQVQEDAQRFAAEWKDEKVVYMMGSGPSFGAAHQESICILLEMQWINSASIHSGEYF 251 (347)
T ss_dssp CCTTHHHHHHHHHTHHHHHHHHHHHTHHHHHHHHHHHTTCSEEEEEECGGGHHHHHHHHHHTHHHHHCCEEEEEETTGGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCcEEEEECCCCHHHHHHHHHHHHHHHcCcCcceeeHHHhc
Confidence 2335677889999999999999985 788999999999999999999999999999999 89999999999999999999
Q ss_pred ccccccccCCCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcceEEEcCCCCcchhhHHHHHHHH
Q 006659 530 HGPLALVDENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVEDCLQPVINIVPLQ 609 (636)
Q Consensus 530 HGp~~~~~~~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~q 609 (636)
|||++++++++|||+|.++|+.++...++.+++++.|+++++|+.++.. . +. + .|.+++.+.|+++++|+|
T Consensus 252 HGP~ali~~~~pvi~~~~~d~~~~~~~~~~~~~~~~g~~v~~i~~~~~~-~------~~-~-~~~~~~~l~pl~~~v~~Q 322 (347)
T 3fkj_A 252 HGPFEITEPGTPFILLQSSGRTRPLDDRAIRFIERYQGKLQLIDADKLG-I------QD-L-STDVGEYFCGLLHNCVLD 322 (347)
T ss_dssp GTGGGGCCTTCEEEEEECSSTTHHHHHHHHHHHHHTTCEEEEEEGGGGT-S------TT-T-CTTTGGGGHHHHHHHHHH
T ss_pred CCcccccCCCceEEEEecCCchHHHHHHHHHHHHHhCCeEEEEeCCccc-c------cc-C-CCCcchhHHHHHHHHHHH
Confidence 9999999999999999998888877888888898889999999764321 1 11 1 256788999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCcce
Q 006659 610 LLAYHLTVLRGYNVDQPRNLAKS 632 (636)
Q Consensus 610 ~la~~lA~~~G~~pd~pr~l~k~ 632 (636)
+++|++|..+|+|||+||||+||
T Consensus 323 lla~~~A~~~G~d~D~PR~l~Kv 345 (347)
T 3fkj_A 323 VYNLALATARNHPLTTRRYMWKV 345 (347)
T ss_dssp HHHHHHHHHTTCCTTCCSSTTTS
T ss_pred HHHHHHHHHhCcCCCCCCCCeee
Confidence 99999999999999999999997
No 14
>3odp_A Putative tagatose-6-phosphate ketose/aldose isome; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PG4; 2.35A {Clostridium novyi}
Probab=100.00 E-value=2.6e-55 Score=466.33 Aligned_cols=340 Identities=17% Similarity=0.205 Sum_probs=286.9
Q ss_pred HHHHHHHHHhcHHHHHHHhhccccccCCcccccccccchHHHHHHHc--CCCeEEEEeechhHHHHHHHHHHHHHhcCCc
Q 006659 271 EHYMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLKTIR--RSRRIVFIGCGTSYNAALAARPILEELSDLP 348 (636)
Q Consensus 271 ~~~m~keI~eqp~~l~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~l~--~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~ 348 (636)
.+||+|||.|||+.+++++..+.+.. ..++++++.+. ..++|+|+|||+|+++|..++++|.++.+++
T Consensus 18 ~~~m~kEI~eQP~~~~~~l~~~~~~~----------~~~~~~~~~~~~~~~~~I~i~G~GtS~~aa~~~~~~l~~~~g~~ 87 (393)
T 3odp_A 18 GYITAKEICNQPKLWRETYEIILSQR----------EKLKSFLDNFAKKPNAKIVITGAGSSAFVGNSVVSYLNAKENIK 87 (393)
T ss_dssp CHHHHHHHHTHHHHHHHHHHHHHHHH----------HHHHHHHHHHHTSTTCEEEEECSTHHHHHHHTTHHHHHHHSSSE
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhcc----------chHHHHHHHHHhCCCCEEEEEEechHHHHHHHHHHHHHHHhCCC
Confidence 67999999999999999997654321 23444444443 3699999999999999999999999988998
Q ss_pred EEEeeccchhcc---cCCCCCCcEEEEEcCCCCCHHHHHHHHHHHHc--CCeEEEEEcCCCCccccccC-----eeEEcC
Q 006659 349 VTMEIASDLVDR---QAPIYREDTAVFVSQSGETADTLQALEYASEN--GALCVGITNTVGSAIARKTH-----CGVHIN 418 (636)
Q Consensus 349 ~~~~~~~e~~~~---~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~~--g~~vi~IT~~~~s~La~~ad-----~~l~~~ 418 (636)
+.....+++... ....+++|++|+||+||+|+|++++++.||++ |+++|+||++++|+|++.|| +++.++
T Consensus 88 v~ai~~~~~~~~~~~~~~~~~~dlvI~iS~SGeT~e~l~al~~ak~~~~Ga~~iaIT~~~~S~La~~aD~~~~~~~i~~~ 167 (393)
T 3odp_A 88 IEAIATTDIVSHPFYYLKKDEPTLLISCARSGNSPESTAAVTLAEKIVDDISHLIITCNSEGKLALHAKRNYNSFLLLMP 167 (393)
T ss_dssp EEECCHHHHTTCGGGTCCTTSCEEEEEEESSSCCHHHHHHHHHHHHHCSSEEEEEEESCTTSHHHHGGGSSSCEEEEECC
T ss_pred eEEeCcHHHHhhhHHhcCCCCCcEEEEEeCCCCCHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHhcCCCceEEEEcC
Confidence 876655443211 11127899999999999999999999999999 99999999999999999999 588888
Q ss_pred CC-CcccccchhhHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHhhhHHHHHHHHhc-hHHHHHHHHHhcCCCeEEEE
Q 006659 419 AG-AEIGVASTKAYTSQIVVMAMLALAIGGDTISTQARREAIIDGLCDLPNKVREVLKL-DQEMKVLAKQLIAEQSLLVF 496 (636)
Q Consensus 419 ~~-~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~-~~~~~~~a~~l~~~~~~~~l 496 (636)
.+ +|.++++|++|+++++++++|+... ..+++.++|..+|+.++++++. .++++++|++ +.++++++
T Consensus 168 ~~~~E~~va~Tksft~ql~~l~ll~~~~---------~~~~~~~~l~~lp~~~~~~l~~~~~~~~~~a~~--~~~~~~~l 236 (393)
T 3odp_A 168 EESNDKGFAMTGSFSTMLLSCLLIFNLD---------KLESIGKQIESISMQGEKVLVNNVELMKKIVGE--KFKRTVYL 236 (393)
T ss_dssp GGGSCCSSSCSHHHHHHHHHHHHTTCTT---------SHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHTT--CCSEEEEE
T ss_pred CccccccccccHHHHHHHHHHHHHHhhc---------cHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhc--CCCeEEEE
Confidence 87 7999999999999998877765422 2345678899999999999986 3778888876 88999999
Q ss_pred eCCCCHHHHHHHHHHHHHhc--cccccccccccccccccccccCCCCeEEEEeCCcc-hHHHHHHHHHHHhcC--CeEEE
Q 006659 497 GRGYNYATALEGALKVKEVA--LMHSEGILAGEMKHGPLALVDENLPILVIATRDAC-FSKQQSVIQQLHARK--GRLIV 571 (636)
Q Consensus 497 G~G~~~~~A~e~alKl~E~~--~~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~~~~~-~~~~~~~~~~~~~~g--~~v~v 571 (636)
|+|.+||+|+|+||||+|++ ++||++++.+||+|||+++++++++||+|.++|+. +...++++++++++| +++++
T Consensus 237 GrG~~~~~A~E~ALKlkE~s~g~i~a~~~~~~e~~HGP~alvd~~~pvi~~~~~d~~t~~~~~~~~~ev~arg~~~~vi~ 316 (393)
T 3odp_A 237 GAANAFGLAKESALKVLELTAGKIATLYDTPLGFRHGPKSIIDDETLIVIFFSNDTYAREYEYDLLKEVYSQNGNHKVLA 316 (393)
T ss_dssp CCTHHHHHHHHHHHHHHHHTTSSSEEEEECHHHHTTTGGGGCCTTEEEEEECCSSHHHHHHHHHHHHHHHHSSSCCEEEE
T ss_pred eCCcCHHHHHHHHHHHHHHhhccchheeecHhhheeccccccCCCceEEEEEcCCchhhHHHHHHHHHHHhcCCCceEEE
Confidence 99999999999999999999 49999999999999999999999999999998874 333456899999988 99999
Q ss_pred EecCCCCcCCCCCCcceEEEcC-----CCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCCC---CCccee
Q 006659 572 MCSKGDAASIFPGGSCRVIEVP-----QVEDCLQPVINIVPLQLLAYHLTVLRGYNVDQPR---NLAKSV 633 (636)
Q Consensus 572 i~~~~~~~~~~~~~~~~~~~~p-----~~~~~~~~~~~~v~~q~la~~lA~~~G~~pd~pr---~l~k~v 633 (636)
|+.+++.... ...+..+.+| .+++.+.|+++++|+|+|||++|+.+|+|||+|| +++|||
T Consensus 317 i~~~~~~~~~--~~~~~~i~~p~~~~~~~~~~l~pi~~~ip~Qllay~~A~~~G~dpD~Pr~~g~vnrVv 384 (393)
T 3odp_A 317 ISEYEDKLIE--DNSDYFIAINKEEQEYEDDSFLSLDYLLNAQMYAFINSMELGIGPDNPCPTGEVNRVV 384 (393)
T ss_dssp EEEECCHHHH--TTCSEEEEEESSCCCCSSGGGGHHHHHHHHHHHHHHHHHHHTCCTTCSCTTCSSCSSC
T ss_pred EEcCCcchhc--cCCcEEEEeCCccccCCChHHhHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcCCcee
Confidence 9876643221 1246778888 7889999999999999999999999999999999 888887
No 15
>3i0z_A Putative tagatose-6-phosphate ketose/aldose isome; NP_344614.1, putative putative tagatose-6-phosphate ketose/A isomerase; HET: MSE; 1.70A {Streptococcus pneumoniae TIGR4}
Probab=100.00 E-value=7.7e-54 Score=454.37 Aligned_cols=337 Identities=17% Similarity=0.209 Sum_probs=279.5
Q ss_pred HHHHHHHHHhcHHHHHHHhhccccccCCcccccccccchHHHH-HHHcCC--CeEEEEeechhHHHHHHHHHHHHHhcCC
Q 006659 271 EHYMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHL-KTIRRS--RRIVFIGCGTSYNAALAARPILEELSDL 347 (636)
Q Consensus 271 ~~~m~keI~eqp~~l~~~l~~~~~~~~~~~~~~l~~~~l~~~~-~~l~~~--~~I~i~G~G~S~~aa~~~~~~~~~~~~~ 347 (636)
.+||+|||.|||+.+++++..+.+.. +.+..+. +.+.+. ++|+|+|||+|+++|..+++++.++.++
T Consensus 15 ~~~m~kEI~eQP~~~~~tl~~~~~~~----------~~~~~~~~~~~~~~~~~~I~i~G~GtS~~aa~~~~~~l~~~~g~ 84 (389)
T 3i0z_A 15 AEITTREIYQQPDVWREAFEFYQAKR----------EEIAAFLQEIADKHDYIKVILTGAGTSAYVGDTLLPYFKEVYDE 84 (389)
T ss_dssp CHHHHHHHHTHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHCSSEEEEEECSTHHHHHHHHHHHHHHHHSCT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcc----------hhHHHHHHHHHhcCCCCeEEEEEechHHHHHHHHHHHHHHHhCC
Confidence 56999999999999999987654321 1233332 234444 7999999999999999999999998888
Q ss_pred c---EEEeeccc-----hhcccCCCCCCcEEEEEcCCCCCHHHHHHHHHHHHc--CCeEEEEEcCCCCccccccCe----
Q 006659 348 P---VTMEIASD-----LVDRQAPIYREDTAVFVSQSGETADTLQALEYASEN--GALCVGITNTVGSAIARKTHC---- 413 (636)
Q Consensus 348 ~---~~~~~~~e-----~~~~~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~~--g~~vi~IT~~~~s~La~~ad~---- 413 (636)
+ +......+ +.+.. .+++|++|++|+||+|++++++++.||++ |+++|+||++.+|+|++.||+
T Consensus 85 ~~~~v~a~~~~~~~ase~~~~~--~~~~dl~i~iS~SG~T~e~~~al~~ak~~~~g~~~i~IT~~~~s~la~~ad~~~~~ 162 (389)
T 3i0z_A 85 RKWNFNAIATTDIVANPATYLK--KDVATVLVSFARSGNSPESLATVDLAKSLVDELYQVTITCAADGKLALQAHGDDRN 162 (389)
T ss_dssp TTEEEEECCHHHHTTCHHHHCC--TTSEEEEEEEESSSCCHHHHHHHHHHHHHCSSEEEEEEESCTTSHHHHTSSSCTTE
T ss_pred CCceEEeccccccccChHHhcC--CCCCcEEEEEeCCCCCHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHccccccc
Confidence 7 65443333 33322 27899999999999999999999999999 999999999999999999998
Q ss_pred -eEEcC-CCCcccccchhhHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHhhhHHHHHHHHhchHHHHHHHHHhcCCC
Q 006659 414 -GVHIN-AGAEIGVASTKAYTSQIVVMAMLALAIGGDTISTQARREAIIDGLCDLPNKVREVLKLDQEMKVLAKQLIAEQ 491 (636)
Q Consensus 414 -~l~~~-~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~a~~l~~~~ 491 (636)
.+.++ .++|.++++|++|++|++++++|+... . .+++.++|..+|+.++++++..+.++++|++ +.+
T Consensus 163 ~~i~~~~~~~E~~va~Tks~t~ql~~l~ll~~~~------~---~~~~~~~l~~lp~~~~~~l~~~~~i~~~a~~--~~~ 231 (389)
T 3i0z_A 163 LLLLQPAVSNDAGFAMTSSFTSMMLTTLLVFDPT------E---FAVKSERFEVVSSLARKVLDKAEDVKELVDL--DFN 231 (389)
T ss_dssp EEEECCGGGSCCSSSCSHHHHHHHHHHHHHHCCS------C---HHHHHHHHHHHHHHHHHHHHTHHHHHHHHTS--CCS
T ss_pred eEEecccccccccccccHHHHHHHHHHHHHHHhc------C---HHHHHHHHHHHHHHHHHHHhChHHHHHHHhc--CCC
Confidence 88887 488999999999999998888776432 1 2345678899999999999876678888876 889
Q ss_pred eEEEEeCCCCHHHHHHHHHHHHHhcc--ccccccccccccccccccccCCCCeEEEEeCCcchH-HHHHHHHHHHhc--C
Q 006659 492 SLLVFGRGYNYATALEGALKVKEVAL--MHSEGILAGEMKHGPLALVDENLPILVIATRDACFS-KQQSVIQQLHAR--K 566 (636)
Q Consensus 492 ~~~~lG~G~~~~~A~e~alKl~E~~~--~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~~~~~~~-~~~~~~~~~~~~--g 566 (636)
+++++|+|.+||+|+|+||||+|+++ +||++++.+||+|||++++++++|||+|.++|+... ..++++++++++ |
T Consensus 232 ~~~~lGrG~~y~~A~EgALKlkE~s~Gei~a~~~~~~e~kHGP~alid~~~pVi~~~~~d~~~~~~~~~~~~ev~arg~g 311 (389)
T 3i0z_A 232 RVIYLGAGPFFGLAHEAQLKILELTAGQVATMYESPVGFRHGPKSLINDNTVVLVFGTTTDYTRKYDLDLVREVAGDQIA 311 (389)
T ss_dssp EEEEEESTHHHHHHHHHHHHHHHHHTTSSEEEEECHHHHTTTGGGGCCTTEEEEEECCCSHHHHHHHHHHHHHHHHHTCS
T ss_pred eEEEEcCCCCHHHHHHHHHHHHHHccCcccceeecHhhccccchhhcCCCceEEEEEcCCchhhHHHHHHHHHHHhccCC
Confidence 99999999999999999999999998 999999999999999999999999999999877422 235788999887 6
Q ss_pred CeEEEEecCCCCcCCCCCCcceEEEcC-CCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCCC---CCccee
Q 006659 567 GRLIVMCSKGDAASIFPGGSCRVIEVP-QVEDCLQPVINIVPLQLLAYHLTVLRGYNVDQPR---NLAKSV 633 (636)
Q Consensus 567 ~~v~vi~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~v~~q~la~~lA~~~G~~pd~pr---~l~k~v 633 (636)
+++++|+.++.. .. ...+..+.+| .+++.+.|+++++|+|+|||++|+.+|+|||+|| +++|||
T Consensus 312 ~~vi~i~~~~~~-~~--~~~~~~i~~~~~~~~~l~pl~~~vp~QllAy~~A~~rG~dpD~PR~~g~vnrVv 379 (389)
T 3i0z_A 312 RRVVLLSDQAFG-LE--NVKEVALGCGGVLNDIYRVFPYIVYAQLFALLTSLKVENKPDTPSPTGTVNRVV 379 (389)
T ss_dssp SEEEEEESSCCC-CT--TCEEEECCCSSCSCGGGGHHHHHHHHHHHHHHHHHHTTCCTTSCCTTSSSCSSC
T ss_pred CeEEEEECCCcc-cc--cCceEEecCCCCcchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCccCccc
Confidence 999999986532 21 1122233333 6788999999999999999999999999999999 888887
No 16
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=100.00 E-value=3.8e-54 Score=449.25 Aligned_cols=311 Identities=21% Similarity=0.313 Sum_probs=272.0
Q ss_pred ccchHHHHHHHc--CCCeEEEEeechhHHHHHHHHHHHHHhc-CCcEEEeeccchhcccC-CCCCCcEEEEEcCCCCCHH
Q 006659 306 LGGLKDHLKTIR--RSRRIVFIGCGTSYNAALAARPILEELS-DLPVTMEIASDLVDRQA-PIYREDTAVFVSQSGETAD 381 (636)
Q Consensus 306 ~~~l~~~~~~l~--~~~~I~i~G~G~S~~aa~~~~~~~~~~~-~~~~~~~~~~e~~~~~~-~~~~~dlvI~iS~SG~t~e 381 (636)
.++++++++.|. ++++|+|+|||+|+++|..+++++.++. ++++.+..++++.+... .++++|++|++|+||+|++
T Consensus 10 ~~~i~~~v~~i~~~~~~~I~i~G~GtS~~aa~~~~~~l~~~~~g~~~~~~~~~e~~~~~~~~l~~~dlvI~iS~SG~T~e 89 (329)
T 3eua_A 10 NREVQAFLQDLKGKTIDHVFFVACGGSSAIMYPSKYVFDRESKSINSDLYSANEFIQRNPVQLGEKSLVILCSHSGNTPE 89 (329)
T ss_dssp CHHHHHHHHHHTTCCCCEEEEEECTHHHHTTHHHHHHHHHHCSSCEEEEEEHHHHHHHCCTTCSTTEEEEEEESSSCCHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEccHHHHHHHHHHHHHHHhcCCCeEEEEccHHHHhcCccCCCCCcEEEEEcCCCCCHH
Confidence 367889999998 8999999999999999999999999987 89999999999876544 5789999999999999999
Q ss_pred HHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCcccccchhhHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHH
Q 006659 382 TLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISTQARREAIID 461 (636)
Q Consensus 382 ~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~~~~~~~~~~~ 461 (636)
++++++.||++|+++|+||++++|+|++.||++|.+++++|.+++.|+ |+ .+++|++.++...+ ..++++++.+
T Consensus 90 ~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g~e~~va~t~-~~----~l~~la~~l~~~~~-~~~~~~~~~~ 163 (329)
T 3eua_A 90 TVKAAAFARGKGALTIAMTFKPESPLAQEAQYVAQYDWGDEALAINTN-YG----VLYQIVFGTLQVLE-NNTKFEQAIE 163 (329)
T ss_dssp HHHHHHHHHHTTCEEEEEESCTTSHHHHHSSEEEECCCSTTCCGGGSH-HH----HHHHHHHHHHHHHH-CCSCHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECCCCChHHHhCCEEEEeCCCCccchhhHH-HH----HHHHHHHHHHHHhc-ChHHHHHHHH
Confidence 999999999999999999999999999999999999999999887664 43 33333443333221 1234567888
Q ss_pred HHhhhHHHHHHHHhc-hHHHHHHHHHhcCCCeEEEEeCCCCHHHHHHHH-HHHHHhccccccccccccccccccccccCC
Q 006659 462 GLCDLPNKVREVLKL-DQEMKVLAKQLIAEQSLLVFGRGYNYATALEGA-LKVKEVALMHSEGILAGEMKHGPLALVDEN 539 (636)
Q Consensus 462 ~l~~l~~~~~~~~~~-~~~~~~~a~~l~~~~~~~~lG~G~~~~~A~e~a-lKl~E~~~~~a~~~~~~Ef~HGp~~~~~~~ 539 (636)
+|..+|+.++++++. +++++++|+++.+.++++++|+|++||+|+|+| |||+|++|+||++|+.+||+|||+++++++
T Consensus 164 ~l~~lp~~~~~~l~~~~~~~~~~a~~~~~~~~~~~lGrG~~~~~A~E~A~LKlkE~s~i~ae~~~a~E~~HGP~alid~~ 243 (329)
T 3eua_A 164 GLDQLQAVYEKALKQEADNAKQFAKAHEKESIIYTMASGANYGVAYSYSICILMEMQWIHSHAIHAGEYFHGPFEIIDES 243 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSBCEEEECGGGHHHHHHHHHTTTHHHHCCBCCEEETTGGGGTGGGGCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcCHHHHHHHHHHHHHHHcccCcccccHHHhccCcHhhccCC
Confidence 999999999999985 788999999999999999999999999999999 899999999999999999999999999999
Q ss_pred CCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcceEEEc-CCCCcchhhHHHHHHHHHHHHHHHHH
Q 006659 540 LPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEV-PQVEDCLQPVINIVPLQLLAYHLTVL 618 (636)
Q Consensus 540 ~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~v~~q~la~~lA~~ 618 (636)
+|||+|.++|+.++...++.++++..|+++++|+.++.. . . .+ |.+++.+.|+++++|+|+++|++|..
T Consensus 244 ~pvi~~~~~~~~~~~~~~~~~~~~~~g~~v~~i~~~~~~-~------~---~~~~~~~~~l~pl~~~~~~Qlla~~~a~~ 313 (329)
T 3eua_A 244 VPFIILLGLDETRPLEERALTFSKKYGKKLTVLDAASYD-F------T---AIDDSVKGYLAPLVLNRVLRSYADELAEE 313 (329)
T ss_dssp SCEEEEECSSTTHHHHHHHHHHHHHHCCCEEEEEGGGSC-C------T---TSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCCcchHHHHHHHHHHHHcCCeEEEEeCCccc-c------c---CCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888877778888888889999999864422 1 1 13 34667899999999999999999999
Q ss_pred cCCCCCCCCCCcce
Q 006659 619 RGYNVDQPRNLAKS 632 (636)
Q Consensus 619 ~G~~pd~pr~l~k~ 632 (636)
+|+|||+||||+||
T Consensus 314 ~G~d~D~PR~l~Kv 327 (329)
T 3eua_A 314 RNHPLSHRRYMWKV 327 (329)
T ss_dssp TTCCTTCCSSTTTS
T ss_pred hCcCCCCCCCCccc
Confidence 99999999999997
No 17
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=100.00 E-value=3.8e-51 Score=431.55 Aligned_cols=309 Identities=17% Similarity=0.265 Sum_probs=269.8
Q ss_pred ccchHHHHHHHcC--CCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEeeccchhcccC-CCCCCcEEEEEcCCCCCHHH
Q 006659 306 LGGLKDHLKTIRR--SRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIASDLVDRQA-PIYREDTAVFVSQSGETADT 382 (636)
Q Consensus 306 ~~~l~~~~~~l~~--~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~dlvI~iS~SG~t~e~ 382 (636)
.+.++++++.|.+ +++|+++|+|+|+++|..+++++.++.++++.+..++++.+... .++++|++|++|+||+|+++
T Consensus 39 ~~~i~~~~~~i~~~~~~~I~i~G~G~S~~~a~~~~~~l~~~~g~~~~~~~~~e~~~~~~~~l~~~dlvI~iS~SG~t~e~ 118 (355)
T 2a3n_A 39 RQKAEQVADEIYQAGFSSLFFASVGGSLAPMMAINEFAKELTTLPVYVEQAAELIHKGNKRLNKDSVVITLSKSGDTKES 118 (355)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEEECGGGHHHHHHHHHHHHHHCCSCEEEEEHHHHHHHCCTTCCTTCEEEEECSSSCCHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEccHHHHHHHHHHHHHHhhcCCeEEEcCcHHHHhhchhcCCCCCEEEEEeCCCCCHHH
Confidence 4678899999887 99999999999999999999999998889999888888865544 45899999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCcccccchhhHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Q 006659 383 LQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISTQARREAIIDG 462 (636)
Q Consensus 383 i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~~~~~~~~~~~~ 462 (636)
+++++.||++|+++|+||++.+|||++.||++|.++.+.+. ++++.+++++++.++...+ ..+++++..+.
T Consensus 119 ~~a~~~ak~~Ga~vi~IT~~~~S~La~~ad~~l~~~~~~~~--------~~~~~~~~ll~~~l~~~~~-~~~~~~~~~~~ 189 (355)
T 2a3n_A 119 VAIAEWCKAQGIRVVAITKNADSPLAQAATWHIPMRHKNGV--------EYEYMLLYWLFFRVLSRNN-EFASYDRFASQ 189 (355)
T ss_dssp HHHHHHHHHTTCEEEEEESCTTSHHHHTCSEEEECCCSSCH--------HHHHHHHHHHHHHHHHHTT-SCTTHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEEECCCCChhhHhCCEEEEeCCCcch--------hHHHHHHHHHHHHHHHHcC-CHHHHHHHHHH
Confidence 99999999999999999999999999999999999865432 3334444445555444433 22346677889
Q ss_pred HhhhHHHHHHHHhc-hHHHHHHHHHhcCCCeEEEEeCCCCHHHHHHHH-HHHHHhccccccccccccccccccccccCCC
Q 006659 463 LCDLPNKVREVLKL-DQEMKVLAKQLIAEQSLLVFGRGYNYATALEGA-LKVKEVALMHSEGILAGEMKHGPLALVDENL 540 (636)
Q Consensus 463 l~~l~~~~~~~~~~-~~~~~~~a~~l~~~~~~~~lG~G~~~~~A~e~a-lKl~E~~~~~a~~~~~~Ef~HGp~~~~~~~~ 540 (636)
|+++++.++++++. +++++++|+++.+.++++++|+|++||+|+|++ |||+|++|+||++++++||+|||++++++++
T Consensus 190 l~~l~~~~~~~l~~~~~~~~~~a~~~~~~~~~~~lG~G~~~~~A~E~allklkE~s~i~a~~~~~~E~~HGp~ali~~~~ 269 (355)
T 2a3n_A 190 LEILPANLLKAKQKFDPQADAIASRYHNSDYMMWVGGAEMWGEVYLFSMCILEEMQWKRTRPVSSAEFFHGALELLEKDV 269 (355)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEECGGGHHHHHHHHHHTHHHHHCCCEEEEEHHHHTTTGGGGCCTTC
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcEEEEcCCcCHHHHHHHHHHHHHHHcccccccccHHHhcCCcceeecCCc
Confidence 99999999999976 788999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred CeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcceEEEcC-CCCcchhhH-HHHHHHHHHHHHHHHH
Q 006659 541 PILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVP-QVEDCLQPV-INIVPLQLLAYHLTVL 618 (636)
Q Consensus 541 ~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~-~~~v~~q~la~~lA~~ 618 (636)
+||+|.++|+.++++.+++++++++|+++++|++++.. .+.+| .+++.+.|+ ++++|+|+++|++|+.
T Consensus 270 ~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~~i~~~~~~----------~~~~~~~~~~~l~pl~~~~~~~Qlla~~~A~~ 339 (355)
T 2a3n_A 270 PLILVKGEGKCRALDERVERFASKITDNLVVIDPKAYA----------LDGIDDEFRWIMAPCVVSTLLVDRLAAHFEKY 339 (355)
T ss_dssp CEEEECCSSTTHHHHHHHHHHHHHHCSCEEEECGGGSC----------CTTSCGGGHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred eEEEEecCCCcHHHHHHHHHHHHHcCCeEEEEECCCcc----------ccCCCcchHhHhccHHHHHHHHHHHHHHHHHH
Confidence 99999998888889999999999999999999865421 12345 456789999 9999999999999999
Q ss_pred cCCCCCCCCCCccee
Q 006659 619 RGYNVDQPRNLAKSV 633 (636)
Q Consensus 619 ~G~~pd~pr~l~k~v 633 (636)
+|+|||+||||+||+
T Consensus 340 ~G~d~D~pr~l~kv~ 354 (355)
T 2a3n_A 340 TGHSLDIRRYYRQFD 354 (355)
T ss_dssp HCCCTTCCSSTTTSC
T ss_pred HCcCCCCCCCCcccc
Confidence 999999999999986
No 18
>3c3j_A Putative tagatose-6-phosphate ketose/aldose isome; tagatose-6-phosphate ketose/aldose isomerase, structural GEN PSI, MCSG; 1.80A {Escherichia coli}
Probab=100.00 E-value=2.1e-52 Score=445.57 Aligned_cols=345 Identities=18% Similarity=0.214 Sum_probs=275.9
Q ss_pred eeccchhhhhcCChHHHHHHHHHhcHHHHHHHhhccccccCCcccccccccchHHHH-HHHcCC-CeEEEEeechhHHHH
Q 006659 257 ILEMEVEQINKGNYEHYMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHL-KTIRRS-RRIVFIGCGTSYNAA 334 (636)
Q Consensus 257 ~~~~~~~~~~~~~y~~~m~keI~eqp~~l~~~l~~~~~~~~~~~~~~l~~~~l~~~~-~~l~~~-~~I~i~G~G~S~~aa 334 (636)
|.+|+....++ ++||++||.|||+++++++..+.+. ...+.+++ +.+.++ ++|+|+|||+|+++|
T Consensus 2 ~~~~~~~~~~~---~~~m~kEI~eqP~~~~~~l~~~~~~----------~~~l~~~~~~~l~~~~~~I~i~G~GtS~~~a 68 (384)
T 3c3j_A 2 PENYTPAAAAT---GTWTEEEIRHQPRAWIRSLTNIDAL----------RSALNNFLEPLLRKENLRIILTGAGTSAFIG 68 (384)
T ss_dssp --CCCCCCCTT---CCHHHHHHHTHHHHHHHHHHHHHHH----------HHHHHHHHHHHHTCTTCEEEEECSTHHHHHH
T ss_pred CccCChhHhcC---chhHHHHHHHHHHHHHHHHHhhhcc----------hhhHHHHHHHHHhcCCCEEEEEEehHHHHHH
Confidence 45667666665 6689999999999999998764210 12344444 347788 999999999999999
Q ss_pred HHHHHHHHHhcCCcEEEeeccchhccc-CCC--CCCcEEEEEcCCCCCHHHHHHHHHHHHc--CCeEEEEEcCCCCcccc
Q 006659 335 LAARPILEELSDLPVTMEIASDLVDRQ-API--YREDTAVFVSQSGETADTLQALEYASEN--GALCVGITNTVGSAIAR 409 (636)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~~--~~~dlvI~iS~SG~t~e~i~al~~ak~~--g~~vi~IT~~~~s~La~ 409 (636)
..+++++.+..++++.+..+.++.... ... +++|++|+||+||+|++++++++.||++ |+++|+||++.+|+|++
T Consensus 69 ~~~~~~l~~~~g~~v~~~~~~~~~~~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~~~ga~~iaIT~~~~S~La~ 148 (384)
T 3c3j_A 69 DIIAPWLASHTGKNFSAVPTTDLVTNPMDYLNPAHPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALYQ 148 (384)
T ss_dssp HHHHHHHHHHHCSEEEECCHHHHHHCHHHHCCTTSCEEEEEEESSSCCHHHHHHHHHHHHHCSSEEEEEEESCTTSHHHH
T ss_pred HHHHHHHHHHhCCcEEEeccHHHHhChhhhhCCCCCeEEEEEeCCcCCHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHh
Confidence 999999998778888887654432211 112 6899999999999999999999999999 99999999999999999
Q ss_pred ccC-----eeEEcCC-CCcccccchhhHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHhhhHHHHHHHHhchHHHHH-
Q 006659 410 KTH-----CGVHINA-GAEIGVASTKAYTSQIVVMAMLALAIGGDTISTQARREAIIDGLCDLPNKVREVLKLDQEMKV- 482 (636)
Q Consensus 410 ~ad-----~~l~~~~-~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~- 482 (636)
.|| ++|.++. ++|.+++.|++|+++++++++|+....... + ++..+|+.++++++..+.+++
T Consensus 149 ~ad~~~~~~~l~~~~~~~e~~~a~t~s~t~~l~~l~~L~~~~~~~~---------~--~l~~l~~~~~~~l~~~~~~~~~ 217 (384)
T 3c3j_A 149 NAINSDNAFALLMPAETHDRGFAMTSSITTMMASCLAVFAPETINS---------Q--TFRDVADRCQAILTSLGDFSEG 217 (384)
T ss_dssp HHHTCTTBCCEECCGGGSCCSSSCSHHHHHHHHHHHHHHCTTTSST---------T--TTHHHHHHHHHHHHHTTTSTTC
T ss_pred hhccCCcEEEEEecCCCcceeeeehHHHHHHHHHHHHHHHhccccH---------H--HHHHHHHHHHHHHHhHHHHHHH
Confidence 999 9999987 789999999999999999888776431110 1 466777777777753333344
Q ss_pred -HHHHhcCCCeEEEEeCCCCHHHHHHHHHHHHHhcc--ccccccccccccccccccccCCCCeEEEEeCCcchHH-HHHH
Q 006659 483 -LAKQLIAEQSLLVFGRGYNYATALEGALKVKEVAL--MHSEGILAGEMKHGPLALVDENLPILVIATRDACFSK-QQSV 558 (636)
Q Consensus 483 -~a~~l~~~~~~~~lG~G~~~~~A~e~alKl~E~~~--~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~~~~~~~~-~~~~ 558 (636)
+|.. +.++++++|+|.+||+|+|++|||+|+++ +||++++.+||+|||+++++++++|++|.++|+..++ +.++
T Consensus 218 ~~a~~--~~~~~~~lG~G~~~~~A~E~aLKl~E~s~g~i~a~~~~~~e~~HGp~~lv~~~~~vi~~~~~~~~~~~~~~~~ 295 (384)
T 3c3j_A 218 VFGYA--PWKRIVYLGSGGLQGAARESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDDETLVVVFVSSHPYTRQYDLDL 295 (384)
T ss_dssp TTCCC--CCSEEEEEESTTHHHHHHHHHHHHHHHTTTSSEEEEECHHHHTTTGGGGCCTTEEEEEECCSSTTHHHHHHHH
T ss_pred HHHHh--cCCeEEEECCCCCHHHHHHHHHHHHHHhhccchhccccHhhcccCCHHHcCCCccEEEEEcCCchhhHHHHHH
Confidence 4433 67899999999999999999999999997 9999999999999999999999999999998876444 7889
Q ss_pred HHHHHhc--CCeEEEEecCCCCcCCCCCCcceEEEcCC---CCcchhhHHHHHHHHHHHHHHHHHcCCCCCCCCCCcc
Q 006659 559 IQQLHAR--KGRLIVMCSKGDAASIFPGGSCRVIEVPQ---VEDCLQPVINIVPLQLLAYHLTVLRGYNVDQPRNLAK 631 (636)
Q Consensus 559 ~~~~~~~--g~~v~vi~~~~~~~~~~~~~~~~~~~~p~---~~~~~~~~~~~v~~q~la~~lA~~~G~~pd~pr~l~k 631 (636)
+++++++ |+++++|+.++.. .. ..+..+.+|. .++.+.|+++++|+|+|||++|+.+|+|||+|||+++
T Consensus 296 ~~ev~ar~~~~~v~~i~~~~~~-~~---~~~~~i~~p~~~~~~~~l~pl~~iv~~Qlla~~~A~~~G~dpD~Pr~~~~ 369 (384)
T 3c3j_A 296 LAELRRDNQAMRVIAIAAESSD-IV---AAGPHIILPPSRHFIDVEQAFCFLMYAQTFALMQSLHMGNTPDTPSASGT 369 (384)
T ss_dssp HHHHHHHTCSSEEEEEESSCCH-HH---HTSSEEECCCCSCCCHHHHHHHHHHHHHHHHHHHHHHTTCCTTCC-----
T ss_pred HHHHHhCcCCCeEEEEeCCCcc-cc---cCCcEEEecCccCCChHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCc
Confidence 9999877 8999999976421 10 0134577886 6788999999999999999999999999999999993
No 19
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=100.00 E-value=9.2e-44 Score=366.81 Aligned_cols=294 Identities=14% Similarity=0.111 Sum_probs=234.1
Q ss_pred HHHHHHHhcHHHHHHHhhccccccCCcccccccccchHHHHHHHcCCCeEEEEeechhHHHHHHHHHHHHHhc-CCcEEE
Q 006659 273 YMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELS-DLPVTM 351 (636)
Q Consensus 273 ~m~keI~eqp~~l~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~-~~~~~~ 351 (636)
.|++||.|||+.+++++... .. +..... ...+.++++|+++|+|+|+++|..+++++.+.. +.++.+
T Consensus 3 ~m~~eI~eqP~~~~~~~~~~-~~--------~~~~~~---~~~~~~~~~I~i~G~G~S~~~a~~~~~~l~~~~~~~~~~~ 70 (302)
T 1tzb_A 3 QLLQDYLNWENYILRRVDFP-TS--------YVVEGE---VVRIEAMPRLYISGMGGSGVVADLIRDFSLTWNWEVEVIA 70 (302)
T ss_dssp HHHHHHHTGGGGCCSCCCCC-SE--------EEETTE---EEECCCCSEEEEECCHHHHHHHHHHHHHHHHTTCSSEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHH-Hh--------cccccc---cccccCCCEEEEEEecHHHHHHHHHHHHHHhhcCCceEEE
Confidence 69999999999999887642 11 111100 011347899999999999999999999998877 888888
Q ss_pred eeccchhcccCCCCCCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCcccccchhhH
Q 006659 352 EIASDLVDRQAPIYREDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAY 431 (636)
Q Consensus 352 ~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~~~t~s~ 431 (636)
..++++ .+++|++|++|+||+|++++++++.||++|+++|+||++. +|++. |+.+. .++|.. ..+.+|
T Consensus 71 ~~~~~~------~~~~dlvI~iS~SG~T~e~~~a~~~ak~~g~~~iaIT~~~--~La~~-~~~l~--~~~e~~-a~~~s~ 138 (302)
T 1tzb_A 71 VKDYFL------KARDGLLIAVSYSGNTIETLYTVEYAKRRRIPAVAITTGG--RLAQM-GVPTV--IVPKAS-APRAAL 138 (302)
T ss_dssp ECSSCC------CCSSSEEEEECSSSCCHHHHHHHHHHHHTTCCEEEEESST--TGGGS-SSCEE--ECCCCS-SGGGGH
T ss_pred eCCcCC------CCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEECCCc--hHHHC-CeeEE--eCCCCC-ccHHHH
Confidence 777665 2789999999999999999999999999999999999997 99999 87773 345544 344499
Q ss_pred HHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHhhhHHHHHHHHhchHHHHHHHHHhcCCCeEEEEeCCCCHHHHHHHHHH
Q 006659 432 TSQIVVMAMLALAIGGDTISTQARREAIIDGLCDLPNKVREVLKLDQEMKVLAKQLIAEQSLLVFGRGYNYATALEGALK 511 (636)
Q Consensus 432 ~~~~~~l~lL~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~a~~l~~~~~~~~lG~G~~~~~A~e~alK 511 (636)
+++++.+++|...++... +. +|+.++..+ .+.++++++++ + +.++++|+|++||+|+|++||
T Consensus 139 ~~~l~~~~~l~~~~~~~~-------------~~-~~~~~~~~~--~~~~~~la~~~-~-~~~~~lG~g~~~~~A~e~alk 200 (302)
T 1tzb_A 139 PQLLTAALHVVAKVYGID-------------VK-IPEGLEPPN--EALIHKLVEEF-Q-KRPTIIAAESMRGVAYRVKNE 200 (302)
T ss_dssp HHHHHHHHHHHHHHHCCC-------------CC-CCSCCCCCC--HHHHHHHHHHH-T-TCCEEEEEGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCc-------------hH-HHHHHhhhC--chHHHHHHHHh-C-CeEEEEeCCcchHHHHHHHHH
Confidence 999888777766654211 01 222222111 34567788888 6 899999999999999999999
Q ss_pred HHHhccccccccccccccccccccccCCCCeEEEEe-CCc-chHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcceE
Q 006659 512 VKEVALMHSEGILAGEMKHGPLALVDENLPILVIAT-RDA-CFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRV 589 (636)
Q Consensus 512 l~E~~~~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~-~~~-~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~ 589 (636)
|+|++|+|+++++.+||+|||++.+++ ++++|.+ +++ ..++..+++++++ |+++++|+.++
T Consensus 201 l~E~~~~~a~~~~~~e~~HGp~~~i~~--~vi~~~~~~~~~~~~~~~~~~~e~~--g~~v~~i~~~~------------- 263 (302)
T 1tzb_A 201 FNENAKIEPSVEILPEAHHNWIEGSER--AVVALTSPHIPKEHQERVKATVEIV--GGSIYAVEMHP------------- 263 (302)
T ss_dssp HHHTTCCCCEEEEETGGGGTHHHHCCS--CEEEEECSSSCHHHHHHHHHHHHHH--CCEEEECCCSH-------------
T ss_pred HHHhcCcceeccccchhcccceEEecc--cEEEEECCCccHHHHHHHHHHHHHh--CceEEEEEcCC-------------
Confidence 999999999999999999999999999 8888887 555 5678888888887 99999987532
Q ss_pred EEcCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCCCCCcceee
Q 006659 590 IEVPQVEDCLQPVINIVPLQLLAYHLTVLRGYNVDQPRNLAKSVT 634 (636)
Q Consensus 590 ~~~p~~~~~~~~~~~~v~~q~la~~lA~~~G~~pd~pr~l~k~v~ 634 (636)
.++++ +++|+|+++||+|+.+|+|||+||||+|+..
T Consensus 264 ------~~~l~---~~~~~q~la~~~A~~~G~dpd~pr~l~k~~~ 299 (302)
T 1tzb_A 264 ------KGVLS---FLRDVGIASVKLAEIRGVNPLATPRIDALKR 299 (302)
T ss_dssp ------HHHHH---HHHHHHHHHHHHHHHHTCCSSCCHHHHHHHH
T ss_pred ------CCcch---hhHHHHHHHHHHHHHhCcCCCCcchHHHHHH
Confidence 01333 8899999999999999999999999999853
No 20
>1xff_A D-fructose-6-, glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; complex (transferase/inhibitor), glutamine amidotransferase; HET: GLU; 1.80A {Escherichia coli} SCOP: d.153.1.1 PDB: 1xfg_A*
Probab=100.00 E-value=5.1e-38 Score=312.69 Aligned_cols=201 Identities=39% Similarity=0.674 Sum_probs=170.0
Q ss_pred ceEEEEEecccccchhhHHHHHHHHHHhccccCCCCcCee-EeCCCCCCCCCCCCCCCCCCCcEEEeecccchhhhhHHH
Q 006659 2 CGIFAYLNYGVNRERRYILQVLFNGLRRLEYRGYDSAGIC-IDDSSSPSPLPSPSSSVNGCPPLVFRQEGNIESLVKSVY 80 (636)
Q Consensus 2 cGI~g~~~~~~~~~~~~~~~~l~~~l~~l~~RG~d~~Gi~-~~~~~~~~~~~~~~~~~~~~~~~~~k~~g~~~~l~~~~f 80 (636)
|||||+++.+ +....+..|+.+|+|||||++|++ +.+++ .+.++|+.|+++++ +
T Consensus 1 CGI~G~~~~~------~~~~~l~~~l~~l~~RG~D~~Gi~~~~~~~---------------~~~~~k~~g~~~~~----~ 55 (240)
T 1xff_A 1 CGIVGAIAQR------DVAEILLEGLRRLEYRGYDSAGLAVVDAEG---------------HMTRLRRLGKVQML----A 55 (240)
T ss_dssp CEEEEEECSS------CCHHHHHHHHHHHGGGCCSEEEEEEECTTC---------------CEEEEEEESCHHHH----H
T ss_pred CcEEEEEcCc------chHHHHHHHHHHHHhcCCCcCCEEEEecCC---------------cEEEEEcCCcHHHH----H
Confidence 9999999643 224678899999999999999999 65443 79999999998864 3
Q ss_pred HHHhhhhhccccccccceEEEeeecCCCCCCCCCCCCCcccCCCCcEEEEEcceecChHHHHHHHHhCCCccccCCHhhH
Q 006659 81 EEVAETELNLEESFSIHAGIAHTRWATHGEPAPRNSHPQTSGAGNEFLVVHNGVITNYEVLKETLIRHGFTFESETDTEV 160 (636)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~igH~R~aT~g~~~~~n~qPf~~~~~~~~~~~hNG~i~N~~~l~~~l~~~g~~~~~~tDsE~ 160 (636)
+.+. ...+.++++|||+||||+|.++..|+|||.. ++++++|||+|+|+.+||++|...|+.|.+.||||+
T Consensus 56 ~~~~------~~~~~~~~~igH~R~at~g~~~~~n~qP~~~---~~~~l~hNG~I~N~~~lr~~L~~~g~~f~~~sDsEv 126 (240)
T 1xff_A 56 QAAE------EHPLHGGTGIAHTRWATHGEPSEVNAHPHVS---EHIVVVHNGIIENHEPLREELKARGYTFVSETDTEV 126 (240)
T ss_dssp HHHH------HSCCCCSEEEEEEECCSSSCSSTTTSSCEEE---TTEEEEEEEEETTHHHHHHHHHHTTCCCCSCCSHHH
T ss_pred hhhh------cccCCccEEEEEEeccCCCCCCcccCCCccc---CCEEEEEEEEECCHHHHHHHHHhCCCCCCCCCHHHH
Confidence 4322 1245689999999999999888899999986 489999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHhhhhhheeEEecCCCCeEEEEEcCCceEEEecc-----Ccccccccc
Q 006659 161 IPKLAKFVFDKANEEEGDQPVTFSQVVVEVMRHLEGAYALIFKSQHYPNELIACKRGSPLLLGVKD-----GAVSILKFD 235 (636)
Q Consensus 161 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~a~~~~d~~~~~~l~~~Rd~~pL~~G~~~-----~~~~~~~~~ 235 (636)
|+++|.+.... + .++.+++++++++|+|+|||++||...+++||++||+|||++|..+ +|+..++..
T Consensus 127 i~~l~~~~~~~-g-------~~~~~ai~~~~~~l~G~fa~~i~d~~~~~~l~~~Rd~~PL~~~~~~~~~~~aSE~~al~~ 198 (240)
T 1xff_A 127 IAHLVNWELKQ-G-------GTLREAVLRAIPQLRGAYGTVIMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALLP 198 (240)
T ss_dssp HHHHHHHHHHT-S-------SCHHHHHHHHGGGCCEEEEEEEEETTCTTCEEEEEEBSCCEEEECSSCEEEESSGGGTTT
T ss_pred HHHHHHHHHhc-C-------CCHHHHHHHHHHhcccceEEEEEecCCCCEEEEEECCCceEEEEeCCEEEEEECHHHHHh
Confidence 99999876532 2 5799999999999999999999996436899999999999999987 455556654
Q ss_pred ee----eccCCCe
Q 006659 236 NA----KGRNGGT 244 (636)
Q Consensus 236 ~~----~~~~g~~ 244 (636)
.+ .++||++
T Consensus 199 ~~~~~~~l~pG~~ 211 (240)
T 1xff_A 199 VTRRFIFLEEGDI 211 (240)
T ss_dssp TCSEEEECCTTCE
T ss_pred hCCeEEEECCCEE
Confidence 32 8999999
No 21
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=100.00 E-value=6.2e-35 Score=320.17 Aligned_cols=216 Identities=21% Similarity=0.309 Sum_probs=171.6
Q ss_pred ceEEEEEecccccchhhHHHHHHHHHHhccccCCCCcCeeEeCCCCCCCCCCCCCCCCCCCcEEEeecccchhhhhHHHH
Q 006659 2 CGIFAYLNYGVNRERRYILQVLFNGLRRLEYRGYDSAGICIDDSSSPSPLPSPSSSVNGCPPLVFRQEGNIESLVKSVYE 81 (636)
Q Consensus 2 cGI~g~~~~~~~~~~~~~~~~l~~~l~~l~~RG~d~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~k~~g~~~~l~~~~f~ 81 (636)
|||||+++.. ++...++.||.+|||||||++||++.+.+ +.+.++|+.|.+++ +|+
T Consensus 1 CGI~G~~~~~------~~~~~l~~~l~~LqhRG~D~aGi~~~~~~--------------~~~~~~k~~g~v~~----vf~ 56 (504)
T 1ecf_A 1 CGIVGIAGVM------PVNQSIYDALTVLQHRGQDAAGIITIDAN--------------NCFRLRKANGLVSD----VFE 56 (504)
T ss_dssp CEEEEEECSS------CCHHHHHHHHHHTGGGCCSEEEEEEECTT--------------SCEEEEEEESCHHH----HCC
T ss_pred CEEEEEEcCh------hHHHHHHHHHHHHHhcCCCcceEEEEcCC--------------CcEEEEecCCchhh----hcC
Confidence 9999999642 34567889999999999999999998632 26899999998875 565
Q ss_pred HHhhhhhccccccccceEEEeeecCCCCCCCCCCCCCcccCCCCcEEEEEcceecChHHHHHHHHhCC-CccccCCHhhH
Q 006659 82 EVAETELNLEESFSIHAGIAHTRWATHGEPAPRNSHPQTSGAGNEFLVVHNGVITNYEVLKETLIRHG-FTFESETDTEV 160 (636)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~igH~R~aT~g~~~~~n~qPf~~~~~~~~~~~hNG~i~N~~~l~~~l~~~g-~~~~~~tDsE~ 160 (636)
+.. + ..+.|+++|||+||+|+|.++..|+|||.....++++++|||+|+|+.+||++|...| +.|.+.||||+
T Consensus 57 ~~~---~---~~l~g~~~igH~R~sT~G~~~~~n~QP~~~~~~~~~~l~hNG~i~N~~eLr~~L~~~g~~~f~s~sDsEv 130 (504)
T 1ecf_A 57 ARH---M---QRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKRRHINTTSDSEI 130 (504)
T ss_dssp HHH---H---HHCCSSEEEEEEECCBTTBCTTSCCSCEEECSSSCEEEEEEEEETTHHHHHHHHHHHHCCCCCSSCHHHH
T ss_pred ccc---c---ccCCCCEEEEEEccCcCCCCCccccCCeEeccCCCEEEEEeeeecCHHHHHHHHHhhCCCCCCCCCHHHH
Confidence 432 1 2467999999999999998888999999876334599999999999999999998764 77899999999
Q ss_pred HHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHhhhhhheeEEecCCCCeEEEEEcC---CceEEEec------c----C
Q 006659 161 IPKLAKFVFDKANEEEGDQPVTFSQVVVEVMRHLEGAYALIFKSQHYPNELIACKRG---SPLLLGVK------D----G 227 (636)
Q Consensus 161 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~a~~~~d~~~~~~l~~~Rd~---~pL~~G~~------~----~ 227 (636)
|+++|.+.+..+|. ...+..++.+++++++++|+|+|||++|+. .++||++||+ |||++|.. . +
T Consensus 131 i~~l~~~~~~~~g~-~~~~~~~~~~a~~~~~~~l~G~fa~v~~~~--~~~l~a~RD~~GirPL~~g~~~~~~g~~~~~~A 207 (504)
T 1ecf_A 131 LLNIFASELDNFRH-YPLEADNIFAAIAATNRLIRGAYACVAMII--GHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVA 207 (504)
T ss_dssp HHHHHHHHHTTCCS-SSCCHHHHHHHHHHHHHHCCEEEEEEEEET--TTEEEEEECTTCCSCCEEEEEECSSSCEEEEEE
T ss_pred HHHHHHHHHHhccc-cccccccHHHHHHHhhhhcCccceEEEEEc--CCeEEEEECCCCCCceEEeecccCCCceEEEEE
Confidence 99999987654331 001113689999999999999999999974 3589999999 99999986 2 3
Q ss_pred cccccccc-----eeeccCCCe--eeCCCc
Q 006659 228 AVSILKFD-----NAKGRNGGT--YARPAS 250 (636)
Q Consensus 228 ~~~~~~~~-----~~~~~~g~~--~~~~~~ 250 (636)
|+..++.. ...++||++ +..+|.
T Consensus 208 SE~~al~~~~~~~v~~l~PGe~v~i~~~g~ 237 (504)
T 1ecf_A 208 SESVALDTLGFDFLRDVAPGEAIYITEEGQ 237 (504)
T ss_dssp SSTHHHHHHTCEEEEECCTTEEEEEETTCC
T ss_pred eCchHhhccCccEEEECCCCeEEEEeCCCc
Confidence 45445432 238999999 445664
No 22
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=100.00 E-value=1e-33 Score=307.61 Aligned_cols=199 Identities=27% Similarity=0.420 Sum_probs=164.4
Q ss_pred ceEEEEEecccccchhhHHHHHHHHHHhccccCCCCcCeeEeCCCCCCCCCCCCCCCCCCCcEEEeecccchhhhhHHHH
Q 006659 2 CGIFAYLNYGVNRERRYILQVLFNGLRRLEYRGYDSAGICIDDSSSPSPLPSPSSSVNGCPPLVFRQEGNIESLVKSVYE 81 (636)
Q Consensus 2 cGI~g~~~~~~~~~~~~~~~~l~~~l~~l~~RG~d~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~k~~g~~~~l~~~~f~ 81 (636)
|||||+++.+ +....++.||.+|+|||||++|+++.++. .+.++|+.|.+++ +|.
T Consensus 1 CGI~G~~~~~------~~~~~~~~~l~~L~hRG~D~~Gi~~~~~~---------------~~~~~k~~g~v~~----~~~ 55 (459)
T 1ao0_A 1 CGVFGIWGHE------EAPQITYYGLHSLQHRGQEGAGIVATDGE---------------KLTAHKGQGLITE----VFQ 55 (459)
T ss_dssp CEEEEEESCT------BHHHHHHHHHHHTGGGCCSEEEEEEECSS---------------CEEEEEEESCHHH----HTT
T ss_pred CEEEEEECCc------chHHHHHHHHHHHHhcCCCcCCEEEEeCC---------------eEEEEecCCcHhh----hcc
Confidence 9999999532 34567889999999999999999998754 7999999998775 443
Q ss_pred HHhhhhhccccccccceEEEeeecCCCCCCCCCCCCCcccC--CCCcEEEEEcceecChHHHHHHHHhCCCccccCCHhh
Q 006659 82 EVAETELNLEESFSIHAGIAHTRWATHGEPAPRNSHPQTSG--AGNEFLVVHNGVITNYEVLKETLIRHGFTFESETDTE 159 (636)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~igH~R~aT~g~~~~~n~qPf~~~--~~~~~~~~hNG~i~N~~~l~~~l~~~g~~~~~~tDsE 159 (636)
+ ..+ ..+.++++|||+||+|+|.++..|+|||... ..++++++|||+|+|+.+||++|...|+.|.+.||||
T Consensus 56 ~---~~l---~~l~g~~~igH~R~at~g~~~~~n~qP~~~~~~~~g~~~l~hNG~I~N~~~Lr~~L~~~g~~f~~~sDsE 129 (459)
T 1ao0_A 56 N---GEL---SKVKGKGAIGHVRYATAGGGGYENVQPLLFRSQNNGSLALAHNGNLVNATQLKQQLENQGSIFQTSSDTE 129 (459)
T ss_dssp S---SCT---TTCCBSEEEEEEECCC----CGGGSSSEEEBCTTTCCEEEEEEEEETTHHHHHHHHHHTTCCCCSSCHHH
T ss_pred h---hhh---hccCCCEEEEEEecCCCCCCCccCCCCceeccCCCCcEEEEEEEEecCHHHHHHHHHhcCCcCCCCCHHH
Confidence 2 111 2467999999999999998878899999873 2578999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHhhhhhheeEEecCCCCeEEEEEcC---CceEEEecc-----Ccccc
Q 006659 160 VIPKLAKFVFDKANEEEGDQPVTFSQVVVEVMRHLEGAYALIFKSQHYPNELIACKRG---SPLLLGVKD-----GAVSI 231 (636)
Q Consensus 160 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~a~~~~d~~~~~~l~~~Rd~---~pL~~G~~~-----~~~~~ 231 (636)
+|+++|. +|+ ..++.+++++++++|+|+|||++|| +++||++||+ |||++|..+ +|+..
T Consensus 130 vi~~l~~----~~~------~~~~~~a~~~~~~~l~G~fa~~i~d---~~~l~~~RD~~G~rPL~~~~~~~~~~~ASE~~ 196 (459)
T 1ao0_A 130 VLAHLIK----RSG------HFTLKDQIKNSLSMLKGAYAFLIMT---ETEMIVALDPNGLRPLSIGMMGDAYVVASETC 196 (459)
T ss_dssp HHHHHHH----TCC------CSSHHHHHHHHHTTCCEEEEEEEEC---SSEEEEEECTTCCSCCEEEEETTEEEEESSTH
T ss_pred HHHHHHH----Hhc------cCCHHHHHHHHHHhhccceEEEEEe---CCEEEEEECCCCCCCeEEEecCCEEEEEECch
Confidence 9999998 443 1479999999999999999999999 5899999999 999999987 45554
Q ss_pred cccce-----eeccCCCe
Q 006659 232 LKFDN-----AKGRNGGT 244 (636)
Q Consensus 232 ~~~~~-----~~~~~g~~ 244 (636)
++... ..++||++
T Consensus 197 al~~~~~~~i~~l~pG~~ 214 (459)
T 1ao0_A 197 AFDVVGATYLREVEPGEM 214 (459)
T ss_dssp HHHHHTCEEEEECCTTEE
T ss_pred HHhcCCCceEEEECCCEE
Confidence 55332 28999999
No 23
>1te5_A Conserved hypothetical protein; glutamine amidotransferase, amidotransferase, structural genomics, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa PAO1} SCOP: d.153.1.1
Probab=99.96 E-value=1.3e-31 Score=268.11 Aligned_cols=176 Identities=19% Similarity=0.182 Sum_probs=130.9
Q ss_pred CceEEEEEecccccchhhHHHHHHHHHHhccccC------CCCcCeeEeCCCCCCCCCCCCCCCCCCCcEEEeecccchh
Q 006659 1 MCGIFAYLNYGVNRERRYILQVLFNGLRRLEYRG------YDSAGICIDDSSSPSPLPSPSSSVNGCPPLVFRQEGNIES 74 (636)
Q Consensus 1 McGI~g~~~~~~~~~~~~~~~~l~~~l~~l~~RG------~d~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~k~~g~~~~ 74 (636)
||||||+++..+ . .++.+|.+||||| +|||||+++++. .+.++|+.|++.+
T Consensus 1 MCgi~G~~~~~~------~--~~~~gL~~Lq~RG~~~~~~~DgaGIa~~~~~---------------~~~~~k~~g~v~~ 57 (257)
T 1te5_A 1 MCELLGMSANVP------T--DIVFSFTGLMQRGGGTGPHRDGWGIAFYEGR---------------GVRLFQDPLASVD 57 (257)
T ss_dssp -CCEEEEEEEEE------E--ECEEEECCCCCCSSSSSSSBCEEEEEEEETT---------------EEEEEEECSBSSC
T ss_pred CCeEEEEEcCCC------c--cHHHHHHHHHhccCCCCCCCCeEEEEEEeCC---------------ceEEEECCCcccc
Confidence 999999996431 1 2344899999999 799999999764 6999999998764
Q ss_pred hhhHHHHHHhhhhhccccccccceEEEeeecCCCCCCCCCCCCCcccC-CCCcEEEEEcceecChHHHHHHHHhCCCccc
Q 006659 75 LVKSVYEEVAETELNLEESFSIHAGIAHTRWATHGEPAPRNSHPQTSG-AGNEFLVVHNGVITNYEVLKETLIRHGFTFE 153 (636)
Q Consensus 75 l~~~~f~~~~~~~~~~~~~~~~~~~igH~R~aT~g~~~~~n~qPf~~~-~~~~~~~~hNG~i~N~~~l~~~l~~~g~~~~ 153 (636)
-. ..+.+.+ ..++|+++|||+||||+|.++..|+|||... ++++|+|+|||+|.|+.+ |.+ ++.|.
T Consensus 58 ~~--~~~~l~~------~~l~g~~~IgHvR~AT~G~~~~~NahPf~~~~~~~~~a~aHNG~i~n~~~-r~~----~~~~~ 124 (257)
T 1te5_A 58 SE--VARLVQR------FPIKSETVIGHIRQANVGKVGLSNTHPFIRELGGRYWTFAHNGQLADFQP-KPG----FYRPV 124 (257)
T ss_dssp CH--HHHHHHH------SCCEEEEEEEEEEECCCSCCSGGGCSCEEEEETTEEEEEEEESCBSSCCC-CCC----SSCCS
T ss_pred ch--HHHHHhh------CCccccEEEEEeecCCCCCCCcCcCCCcEecCCCCeEEEEecCcccCchh-hhc----cCCcc
Confidence 11 1121110 1457999999999999999999999999976 456899999999999998 643 45689
Q ss_pred cCCHhhHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHhh--hhhheeEEecCCCCeEEEEEc
Q 006659 154 SETDTEVIPKLAKFVFDKANEEEGDQPVTFSQVVVEVMRHLE--GAYALIFKSQHYPNELIACKR 216 (636)
Q Consensus 154 ~~tDsE~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--G~~a~~~~d~~~~~~l~~~Rd 216 (636)
++||||+|+++|.+.+.+.+ ++......+.++++++.+.+. |.|+|++.| ++.||++||
T Consensus 125 s~TDSEvi~~li~~~~~~~~-~~~~~~~a~~~al~~l~~~~~~~G~~n~~l~~---g~~l~a~rd 185 (257)
T 1te5_A 125 GETDSEAAFCDLLNRVRRAF-PEPVPVEVLLPVLISACDEYRKKGVFNALISD---GDWLFTFCS 185 (257)
T ss_dssp SCCHHHHHHHHHHHHHHHHC-SSCCCHHHHHHHHHHHHHHHHTTBCCEEEEES---SSCEEEECS
T ss_pred cCCHHHHHHHHHHHHHHHhc-CCCchHHHHHHHHHHHHHHHHhcCcEEEEEEc---CCEEEEEEc
Confidence 99999999999998775321 000000123444444445555 999999988 689999999
No 24
>3mdn_A Glutamine aminotransferase class-II domain protei; structural genomics, PSI-2, protein structure initiative; 2.09A {Ruegeria pomeroyi}
Probab=99.96 E-value=1.3e-29 Score=255.07 Aligned_cols=204 Identities=19% Similarity=0.142 Sum_probs=130.4
Q ss_pred CceEEEEEecccccchhhHHHHHHHHHHhcccc--------CCCCcCeeEeCCCCCCCCCCCCCCCCCCCcEEEeecccc
Q 006659 1 MCGIFAYLNYGVNRERRYILQVLFNGLRRLEYR--------GYDSAGICIDDSSSPSPLPSPSSSVNGCPPLVFRQEGNI 72 (636)
Q Consensus 1 McGI~g~~~~~~~~~~~~~~~~l~~~l~~l~~R--------G~d~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~k~~g~~ 72 (636)
||++||+...+.. -.+........|..+.++ ++|||||+++++. +.+.++|+++++
T Consensus 3 MCR~~~y~g~~~~--l~~ll~~p~~sL~~qs~~~~~~~~~~~~Dg~GIa~~~~~--------------~~~~~~r~~~p~ 66 (274)
T 3mdn_A 3 LCRWAAYHGTPIF--LEDVISRPGHSLIAQSAHAEECKTATNGDGFGVAWYDAR--------------PEPGLYRDVYPA 66 (274)
T ss_dssp -CCEEEEEEEEEE--GGGTC------------------------CEEEEEESSS--------------SSCEEEEESSCG
T ss_pred ccceeeecCCCcc--HHHHHhCccccHHHHhhhhhhcCCCCCCCeeEEEEEcCC--------------CcEEEEecCCcc
Confidence 9999999963211 112222233345444444 7899999999763 268999999954
Q ss_pred hhhhhHHHHHHhhhhhccccccccceEEEeeecCCCCCCCCCCCCCcccCCCCcEEEEEcceecChHHHHHHHHhCC--C
Q 006659 73 ESLVKSVYEEVAETELNLEESFSIHAGIAHTRWATHGEPAPRNSHPQTSGAGNEFLVVHNGVITNYEVLKETLIRHG--F 150 (636)
Q Consensus 73 ~~l~~~~f~~~~~~~~~~~~~~~~~~~igH~R~aT~g~~~~~n~qPf~~~~~~~~~~~hNG~i~N~~~l~~~l~~~g--~ 150 (636)
-+. ..++.+. ...+++++|||+||||.|..+..|+|||..+ +|+|+|||+|+|+.+||++|...| +
T Consensus 67 ~~~--~~l~~l~-------~~~~g~~~igHvR~AT~g~~s~~n~qPf~~g---~~~~~HNG~I~N~~~Lr~~L~~~g~~~ 134 (274)
T 3mdn_A 67 WSD--PNLRAVA-------HHVRSGLFLSHVRASTGSCISRNNCHPFAAR---RWCFMHNGQVGGFEAFRKQADMAIADE 134 (274)
T ss_dssp GGC--HHHHHHH-------HHCEEEEEEEEC------------CCCEEET---TEEEEEEEEETTGGGGHHHHHHTSCHH
T ss_pred cCc--HHHHHHh-------hcCCCCEEEEEEccccCCCCcccCCCCcccC---CEEEEEeeEEcCHHHHHHHHHhhCCcc
Confidence 221 1122221 2356899999999999998888999999864 899999999999999999999887 3
Q ss_pred cc---ccCCHhhHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHhhhh-----------hheeEEecCCCCeEEEEEc
Q 006659 151 TF---ESETDTEVIPKLAKFVFDKANEEEGDQPVTFSQVVVEVMRHLEGA-----------YALIFKSQHYPNELIACKR 216 (636)
Q Consensus 151 ~~---~~~tDsE~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~-----------~a~~~~d~~~~~~l~~~Rd 216 (636)
.| .++||||+|+++|..... ..++.+++++++++|+|. |+|+++| +++||++||
T Consensus 135 ~f~~~~~~TDSEvi~~l~~~~~~---------~~~~~~al~~~l~~l~G~~~~~g~~~~~a~~~~~~d---~~~l~a~Rd 202 (274)
T 3mdn_A 135 FYTYRKGSTDSEVLFLLALSEGL---------EHDPHGALARAIARLEGLSRAHGTTPHMRLSAAFSD---GQTLYAARY 202 (274)
T ss_dssp HHTTCCSCCHHHHHHHHHHHTTT---------TTCHHHHHHHHHHHHHHHHHHHSCSSSEEEEEEEEC---SSCEEEEEE
T ss_pred eecCCCCCChHHHHHHHHHHhhh---------cCCHHHHHHHHHHHHHhHHhhcCcccCceEEEEEEc---CCEEEEEEC
Confidence 34 689999999999964321 147899999999999998 8888887 689999999
Q ss_pred C----CceEEEecc--------Cccccccc--ceeeccCCCe
Q 006659 217 G----SPLLLGVKD--------GAVSILKF--DNAKGRNGGT 244 (636)
Q Consensus 217 ~----~pL~~G~~~--------~~~~~~~~--~~~~~~~g~~ 244 (636)
+ +||++|... +||..... +...++||++
T Consensus 203 ~~~G~~Pll~~~~~~~~~~~~vASE~l~~~~~~~~~v~pGei 244 (274)
T 3mdn_A 203 SSDHIAPSVYYRYSHARQGWAVVSEPLETDEGDWTELRPGRM 244 (274)
T ss_dssp ESSSCCCCCEEEEETTTTEEEEESSCC--CCSCCEECCSSEE
T ss_pred CCCCCCCeEEEEEeCCCCEEEEEecccccCCceEEEECcCEE
Confidence 8 999888753 33331111 1227999999
No 25
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1
Probab=99.95 E-value=1.8e-27 Score=263.66 Aligned_cols=172 Identities=19% Similarity=0.267 Sum_probs=142.4
Q ss_pred ceEEEEEecccccchhhHHHHHHHHHHhccccCCCCcCeeEeCCCCCCCCCCCCCCCCCCCcEEEeecccchhhhhHHHH
Q 006659 2 CGIFAYLNYGVNRERRYILQVLFNGLRRLEYRGYDSAGICIDDSSSPSPLPSPSSSVNGCPPLVFRQEGNIESLVKSVYE 81 (636)
Q Consensus 2 cGI~g~~~~~~~~~~~~~~~~l~~~l~~l~~RG~d~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~k~~g~~~~l~~~~f~ 81 (636)
|||+|+++.+.. .......+..|+.+|+|||||++|+++.+
T Consensus 1 CGI~G~~~~~~~--~~~~~~~~~~m~~~l~hRGpD~~G~~~~~------------------------------------- 41 (553)
T 1ct9_A 1 ASIFGVFDIKTD--AVELRKKALELSRLMRHRGPDWSGIYASD------------------------------------- 41 (553)
T ss_dssp CEEEEEESCCSC--HHHHHHHHHHHHHTTGGGCBTEEEEEECS-------------------------------------
T ss_pred CEEEEEEcCCCc--chhHHHHHHHHHHHHhccCCCcccEEEEC-------------------------------------
Confidence 999999965421 12345678899999999999999998762
Q ss_pred HHhhhhhccccccccceEEEeeecCCCCCCCCCCCCCcccCCCCcEEEEEcceecChHHHHHHHHhCCCccccCCHhhHH
Q 006659 82 EVAETELNLEESFSIHAGIAHTRWATHGEPAPRNSHPQTSGAGNEFLVVHNGVITNYEVLKETLIRHGFTFESETDTEVI 161 (636)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~igH~R~aT~g~~~~~n~qPf~~~~~~~~~~~hNG~i~N~~~l~~~l~~~g~~~~~~tDsE~i 161 (636)
.++|||+||+|.|. + .|+|||... +++++++|||+|||+.+||++|... +.|.+.||||+|
T Consensus 42 ---------------~~~lgh~Rlsi~~~-~-~~~QP~~~~-~~~~~lv~NGeIyN~~eLr~~L~~~-~~f~s~sDtEvi 102 (553)
T 1ct9_A 42 ---------------NAILAHERLSIVDV-N-AGAQPLYNQ-QKTHVLAVNGEIYNHQALRAEYGDR-YQFQTGSDCEVI 102 (553)
T ss_dssp ---------------SEEEEEEECCCSCT-T-TCCSSEECT-TSCEEEEEEEEETTHHHHHHHHTTT-SCCCSCCTTHHH
T ss_pred ---------------CEEEEEEeeeeeCC-C-CCCCCeEeC-CCCEEEEEEEEEECHHHHHHHHhcc-CccCCCCcHHHH
Confidence 27999999999996 4 899999876 6789999999999999999999877 889999999999
Q ss_pred HHHHHHHHhhccccCCCCCCCHHHHHHHHHHHhhhhhheeEEecCCCCeEEEEEcC---CceEEEec-c-----Cccccc
Q 006659 162 PKLAKFVFDKANEEEGDQPVTFSQVVVEVMRHLEGAYALIFKSQHYPNELIACKRG---SPLLLGVK-D-----GAVSIL 232 (636)
Q Consensus 162 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~a~~~~d~~~~~~l~~~Rd~---~pL~~G~~-~-----~~~~~~ 232 (636)
+++|. +|| .+++++|+|+|||++||.. .++|+++||+ +|||+|.. + +|+..+
T Consensus 103 l~l~~----~~g--------------~~~l~~l~G~fa~~i~d~~-~~~l~~aRD~~G~~PLy~~~~~~~~~~faSe~~a 163 (553)
T 1ct9_A 103 LALYQ----EKG--------------PEFLDDLQGMFAFALYDSE-KDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKA 163 (553)
T ss_dssp HHHHH----HHT--------------TTTGGGCCEEEEEEEEETT-TTEEEEEECTTCCSCCEEEECTTCCEEEESSGGG
T ss_pred HHHHH----HHH--------------HHHHHhCCccEEEEEEECC-CCEEEEEECCCCCCCeEEEEecCCEEEEeechHH
Confidence 99998 444 5689999999999999986 5899999999 99999984 3 455556
Q ss_pred ccc----eeeccCCCeee-CCCc
Q 006659 233 KFD----NAKGRNGGTYA-RPAS 250 (636)
Q Consensus 233 ~~~----~~~~~~g~~~~-~~~~ 250 (636)
+.. ...++||++.. .+|.
T Consensus 164 l~~~~~~i~~l~pG~~~~~~~g~ 186 (553)
T 1ct9_A 164 LVPVCRTIKEFPAGSYLWSQDGE 186 (553)
T ss_dssp TTTTCSEEEECCTTEEEETTTCS
T ss_pred HHhhcCCEEEECCCeEEEEcCCc
Confidence 553 23899999943 3453
No 26
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=99.86 E-value=2.2e-21 Score=190.19 Aligned_cols=181 Identities=17% Similarity=0.170 Sum_probs=142.8
Q ss_pred ChHHHHHHHHHhcHHHHHHHhhccccccCCcccccccccchHHHHHHHcC-----CCeEEEEeechhHHHHHHHHHHHHH
Q 006659 269 NYEHYMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLKTIRR-----SRRIVFIGCGTSYNAALAARPILEE 343 (636)
Q Consensus 269 ~y~~~m~keI~eqp~~l~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~l~~-----~~~I~i~G~G~S~~aa~~~~~~~~~ 343 (636)
+|++++..+..+....+.+.+...++.+ .+.++.++++++++.|.+ +++|+++|+|+|+.+|..+++.|.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~i~~t----~~~ld~~~i~~~~~~i~~~a~~~a~~I~i~G~G~S~~~A~~~~~~l~~ 83 (220)
T 3etn_A 8 HHHHHENLYFQGMIESIQELLQKEAQAV----LNIPVTDAYEKAVELIVEQIHRKKGKLVTSGMGKAGQIAMNIATTFCS 83 (220)
T ss_dssp -----------CHHHHHHHHHHHHHHHH----HTCCCCTHHHHHHHHHHHHTTTTCCCEEEECSHHHHHHHHHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHH----HHhcCHHHHHHHHHHHHhHhhccCCEEEEEEecHHHHHHHHHHHHHHh
Confidence 5677777777777766666655544433 367788999999999988 9999999999999999999999998
Q ss_pred hcCCcEEEeeccchhcc-cCCCCCCcEEEEEcCCCCCHHHHHHHHHHHH--cCCeEEEEEcCCCCccccccCeeEEcCCC
Q 006659 344 LSDLPVTMEIASDLVDR-QAPIYREDTAVFVSQSGETADTLQALEYASE--NGALCVGITNTVGSAIARKTHCGVHINAG 420 (636)
Q Consensus 344 ~~~~~~~~~~~~e~~~~-~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~--~g~~vi~IT~~~~s~La~~ad~~l~~~~~ 420 (636)
+ +.++....+.++... ...++++|++|++|+||+|++++++++.||+ +|+++|+||++.+|||+++||++|.++.+
T Consensus 84 l-g~~~~~~~~~~~~~~~~~~~~~~DlvI~iS~SG~t~~~i~~~~~ak~~~~Ga~vI~IT~~~~s~La~~aD~~l~~~~~ 162 (220)
T 3etn_A 84 T-GIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPGLKFIVITGNPDSPLASESDVCLSTGHP 162 (220)
T ss_dssp T-TCCEEECCTTGGGBTGGGGCCTTCEEEEECSSSCCHHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHSSEEEECCCC
T ss_pred c-CCcEEEeCCHHHHHhhhccCCCCCEEEEEcCCCCCHHHHHHHHHHHhcCCCCeEEEEECCCCChhHHhCCEEEEcCCC
Confidence 5 678877777665433 3467899999999999999999999999999 99999999999999999999999999887
Q ss_pred Ccc---cccchhhHHHHHHHHHHHHHHHhcCCCCcHH
Q 006659 421 AEI---GVASTKAYTSQIVVMAMLALAIGGDTISTQA 454 (636)
Q Consensus 421 ~e~---~~~~t~s~~~~~~~l~lL~~~~~~~~~~~~~ 454 (636)
++. .+..+.|++++++++.+|+..++..++.+.+
T Consensus 163 ~e~~~~~~~~~~S~~~~l~lld~L~~~l~~~~g~~~~ 199 (220)
T 3etn_A 163 AEVCTLGMTPTTSTTVMTVIGDILVVQTMKRTEFTIE 199 (220)
T ss_dssp CCCSTTSCSSSHHHHHHHHHHHHHHHHHHHHHTCCHH
T ss_pred cccccccccchHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 652 3456789999999999999998877665443
No 27
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.86 E-value=2.3e-21 Score=227.54 Aligned_cols=216 Identities=12% Similarity=0.117 Sum_probs=160.8
Q ss_pred hHHHHHHHHHHhccccCCCCcCeeEeCCCCCCCCCCCCCCCCCCCcEEEeecccchhhhhHHHHHHhhhhhccccccccc
Q 006659 18 YILQVLFNGLRRLEYRGYDSAGICIDDSSSPSPLPSPSSSVNGCPPLVFRQEGNIESLVKSVYEEVAETELNLEESFSIH 97 (636)
Q Consensus 18 ~~~~~l~~~l~~l~~RG~d~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~k~~g~~~~l~~~~f~~~~~~~~~~~~~~~~~ 97 (636)
+....++.++.+++||++++++|+..+. ++.+||+.|.++++. .+|.++. +..+.|+
T Consensus 143 ~~~r~ly~~r~~le~~~~~~~yI~S~s~----------------~~~vyKgmgl~~~v~-~~y~dL~------~~~~~g~ 199 (1520)
T 1ofd_A 143 ELDRRLYIARSIIGKKLAEDFYVCSFSC----------------RTIVYKGMVRSIILG-EFYLDLK------NPGYTSN 199 (1520)
T ss_dssp HHHHHHHHHHHHHGGGCBTTBEEEEEES----------------SEEEEEESSCHHHHH-HHBHHHH------CTTCCBS
T ss_pred hHHHHHHHHHHHHHhhccCCEEEEEecC----------------cEEEEeCCccHHHHh-hhhhhcc------cccccee
Confidence 5667899999999999999999999974 799999999999865 4556543 1357899
Q ss_pred eEEEeeecCCCCCCCCCCCCCcccCCCCcEEEEEcceecChHHHHH-----------------HHHhCC-CccccCCHhh
Q 006659 98 AGIAHTRWATHGEPAPRNSHPQTSGAGNEFLVVHNGVITNYEVLKE-----------------TLIRHG-FTFESETDTE 159 (636)
Q Consensus 98 ~~igH~R~aT~g~~~~~n~qPf~~~~~~~~~~~hNG~i~N~~~l~~-----------------~l~~~g-~~~~~~tDsE 159 (636)
++|||+||+|+|.+++.|+|||.. ++|||+|.|...+|+ +|...+ ..+.+.||||
T Consensus 200 ~aigH~RySTnt~p~w~~AQPf~~-------LaHNGeInt~~~nrnwm~aR~~~~~s~~~~g~~l~~~~p~i~~~~SDSe 272 (1520)
T 1ofd_A 200 FAVYHRRFSTNTMPKWPLAQPMRL-------LGHNGEINTLLGNINWMAAREKELEVSGWTKAELEALTPIVNQANSDSY 272 (1520)
T ss_dssp EEEEEECCCSSSCCCGGGSSCCSS-------EEEEECCTTHHHHHHHHHHHGGGCCCTTCCHHHHHHHCCSCCTTSCHHH
T ss_pred EEEEEccccCCCCCCcccCCchhe-------eEecchhhcHHHHHHHHHHHHHHhcCcccchhhHHhhCCcCCCCCCcHH
Confidence 999999999999999999999963 899999999988882 233334 3478999999
Q ss_pred HHHHHHHHHHhhccccCCCCCCCHHHHHHHH---------------------------HHHhhhhhheeEEecCCCCeEE
Q 006659 160 VIPKLAKFVFDKANEEEGDQPVTFSQVVVEV---------------------------MRHLEGAYALIFKSQHYPNELI 212 (636)
Q Consensus 160 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~l~G~~a~~~~d~~~~~~l~ 212 (636)
++.++++..... + .++.+|+..+ ++.++|+|++++.| ++.++
T Consensus 273 ~ld~~lelL~~~-g-------~~l~~A~~~liPeaw~~~~~m~~~~~~~~fyey~~~~me~~dGpaalv~~d---g~~l~ 341 (1520)
T 1ofd_A 273 NLDSALELLVRT-G-------RSPLEAAMILVPEAYKNQPALKDYPEISDFHDYYSGLQEPWDGPALLVFSD---GKIVG 341 (1520)
T ss_dssp HHHHHHHHHHHT-T-------CCHHHHHHHHSCCCCTTCGGGTTCHHHHHHHHHHTTTCCCCCSSEEEEEEC---SSEEE
T ss_pred HHHHHHHHHHhc-C-------CCHHHHHHHhCcchhcccccccccHHHHHHHHHHHHhcccCCCCEEEEEEe---CCEEE
Confidence 999888754432 2 4666666444 57889999999999 78999
Q ss_pred EEEcC---CceEEEecc-----Ccccccccce--------eeccCCCe--eeC-CCcccceeeeeccchhhhhcCChHHH
Q 006659 213 ACKRG---SPLLLGVKD-----GAVSILKFDN--------AKGRNGGT--YAR-PASVQRALSILEMEVEQINKGNYEHY 273 (636)
Q Consensus 213 ~~Rd~---~pL~~G~~~-----~~~~~~~~~~--------~~~~~g~~--~~~-~~~~~~~i~~~~~~~~~~~~~~y~~~ 273 (636)
++||+ |||++|+.. .++|++.+|. ..+.||++ ++. .|.+ +.--+.+.......||..|
T Consensus 342 a~~DrnGlRPl~~~~t~d~~~v~ASE~galdi~~a~~vrkg~l~PGemv~id~~~g~i---~~~~eik~~~a~~~py~~w 418 (1520)
T 1ofd_A 342 AGLDRNGLRPARYCITKDDYIVLGSEAGVVDLPEVDIVEKGRLAPGQMIAVDLAEQKI---LKNYQIKQQAAQKYPYGEW 418 (1520)
T ss_dssp EEECTTCCSCCEEEEETTCCEEEESSTTCSCCCGGGEEEEEECCTTCEEEEETTTTEE---ECHHHHHHHHHTTSCHHHH
T ss_pred EEecCCCCCceEEEEeCCCEEEEEcccccccCcchheeeccCCCCCeEEEEECCCCeE---echHHHHHHHHhcCCHHHH
Confidence 99999 999999865 3455555552 28999999 322 2321 1122223233345566666
Q ss_pred HHHH
Q 006659 274 MQKE 277 (636)
Q Consensus 274 m~ke 277 (636)
+.+.
T Consensus 419 l~~~ 422 (1520)
T 1ofd_A 419 IKIQ 422 (1520)
T ss_dssp HHHH
T ss_pred Hhhh
Confidence 5443
No 28
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.86 E-value=1.3e-21 Score=229.05 Aligned_cols=213 Identities=16% Similarity=0.161 Sum_probs=158.1
Q ss_pred hHHHHHHHHHHhccccCCC----CcCeeEeCCCCCCCCCCCCCCCCCCCcEEEeecccchhhhhHHHHHHhhhhhccccc
Q 006659 18 YILQVLFNGLRRLEYRGYD----SAGICIDDSSSPSPLPSPSSSVNGCPPLVFRQEGNIESLVKSVYEEVAETELNLEES 93 (636)
Q Consensus 18 ~~~~~l~~~l~~l~~RG~d----~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~k~~g~~~~l~~~~f~~~~~~~~~~~~~ 93 (636)
+....++.++.+++||+++ +++|+..+. ++.+||+.|.++++. .+|.++. +..
T Consensus 143 ~~~r~ly~~r~~le~~~~~~~~~~~yi~Sls~----------------~~~vyKGmgl~~~v~-~~y~dL~------d~~ 199 (1479)
T 1ea0_A 143 QFELDLYIIRRRIEKAVKGEQINDFYICSLSA----------------RSIIYKGMFLAEQLT-TFYPDLL------DER 199 (1479)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCSCEEEEEES----------------SEEECCBSSCGGGHH-HHCGGGG------STT
T ss_pred hHHHHHHHHHHHHHHhhhhccCCcEEEEEecC----------------cEEEEecCcCHHHhh-hhhhhhc------ccc
Confidence 5677899999999999974 789999864 799999999999765 4444432 245
Q ss_pred cccceEEEeeecCCCCCCCCCCCCCcccCCCCcEEEEEcceecChHHHHHHHHh----------------CC-CccccCC
Q 006659 94 FSIHAGIAHTRWATHGEPAPRNSHPQTSGAGNEFLVVHNGVITNYEVLKETLIR----------------HG-FTFESET 156 (636)
Q Consensus 94 ~~~~~~igH~R~aT~g~~~~~n~qPf~~~~~~~~~~~hNG~i~N~~~l~~~l~~----------------~g-~~~~~~t 156 (636)
+.|.++|||+||+|+|.+++.|+|||.. ++|||+|.|...+|+.+.. .+ ..+.+.|
T Consensus 200 ~~g~~aigH~RySTnt~p~w~~AQPf~~-------laHNGeInn~~~nr~~m~are~~~~~~~~G~~l~~~~pii~~~~S 272 (1479)
T 1ea0_A 200 FESDFAIYHQRYSTNTFPTWPLAQPFRM-------LAHNGEINTVKGNVNWMKAHETRMEHPAFGTHMQDLKPVIGVGLS 272 (1479)
T ss_dssp CCBSEEEEEECCCSCSCCCSTTSSCCSS-------EEEEECCTTHHHHHHHHHHHGGGCCCSTTGGGHHHHCCSSCTTCC
T ss_pred cceeEEEeeecccCCCCCCcccCCccEE-------EEECChhhCHHHHHHHHHHhHhhhcCchhhhhHHhcCCcCCCCCC
Confidence 7899999999999999999999999963 8999999999999988641 12 2267899
Q ss_pred HhhHHHHHHHHHHhhccccCCCCCCCHHHHHH-------------------------HHHHHhhhhhheeEEecCCCCeE
Q 006659 157 DTEVIPKLAKFVFDKANEEEGDQPVTFSQVVV-------------------------EVMRHLEGAYALIFKSQHYPNEL 211 (636)
Q Consensus 157 DsE~i~~l~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~l~G~~a~~~~d~~~~~~l 211 (636)
|||++.++++.... .+ .++.+|+. .+++.++|+|++++.| ++.|
T Consensus 273 DSevld~~lelL~~-~g-------~~l~~A~~~liPeaw~~~~~m~~~~~~fye~~~~~me~~dGp~slv~~d---g~~l 341 (1479)
T 1ea0_A 273 DSGSLDTVFEVMVR-AG-------RTAPMVKMMLVPQALTSSQTTPDNHKALIQYCNSVMEPWDGPAALAMTD---GRWV 341 (1479)
T ss_dssp HHHHHHHHHHHHHH-TT-------CCHHHHHHHHSCCCCC---CCCHHHHHHHHHHHHHCCCCCSSEEEEECS---SSEE
T ss_pred cHHHHHHHHHHHHH-cC-------CCHHHHHHHhCchhhcccccCCHHHHHHHHHHHHhhccCCCcEEEEEEe---CCEE
Confidence 99999888875432 22 45666655 4467889999999988 7899
Q ss_pred EEEEcC---CceEEEecc-----Ccccccccce--------eeccCCCe--eeC-CCcccceeeeeccchhhhhcCChHH
Q 006659 212 IACKRG---SPLLLGVKD-----GAVSILKFDN--------AKGRNGGT--YAR-PASVQRALSILEMEVEQINKGNYEH 272 (636)
Q Consensus 212 ~~~Rd~---~pL~~G~~~-----~~~~~~~~~~--------~~~~~g~~--~~~-~~~~~~~i~~~~~~~~~~~~~~y~~ 272 (636)
+++||+ |||++|+.. .++|++.++. ..+.||++ ++. .|.+ +.--+.+.......||..
T Consensus 342 ~a~~DrnGlRPl~~g~t~d~~~v~ASE~galdi~~a~~vrkg~l~PGemv~id~~~g~i---~~~~eik~~~~~~~py~~ 418 (1479)
T 1ea0_A 342 VGGMDRNGLRPMRYTITTDGLIIGGSETGMVKIDETQVIEKGRLGPGEMIAVDLQSGKL---YRDRELKDHLATLKPWDK 418 (1479)
T ss_dssp EEECCTTCCSCCEEEEETTSEEEECSSSTTSCCCGGGEEEEEECCTTCEEEEETTTTEE---ECHHHHHHHHHHTTTHHH
T ss_pred EEEecCCCCcceEEEEECCCEEEEEcccccccCcchheeeccCCCCCeEEEEECCCCeE---eccHHHHHHHHhhCCchh
Confidence 999999 999999764 3455555552 28999999 332 3431 112222223334556766
Q ss_pred HH
Q 006659 273 YM 274 (636)
Q Consensus 273 ~m 274 (636)
|+
T Consensus 419 wl 420 (1479)
T 1ea0_A 419 WV 420 (1479)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 29
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=99.82 E-value=2.1e-19 Score=171.72 Aligned_cols=144 Identities=21% Similarity=0.159 Sum_probs=124.5
Q ss_pred ccccccchHHHHHHHcCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEee--ccchhcccCCCCCCcEEEEEcCCCCC
Q 006659 302 KSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEI--ASDLVDRQAPIYREDTAVFVSQSGET 379 (636)
Q Consensus 302 ~~l~~~~l~~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~--~~e~~~~~~~~~~~dlvI~iS~SG~t 379 (636)
+.++.+.++++++.|.++++|+++|+|+|+.+|..+++.+.++ +.++.... +.++......++++|++|++|+||+|
T Consensus 22 ~~l~~~~l~~~~~~i~~a~~I~i~G~G~S~~~a~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~~d~~i~iS~sG~t 100 (187)
T 3sho_A 22 NQTQPEAIEAAVEAICRADHVIVVGMGFSAAVAVFLGHGLNSL-GIRTTVLTEGGSTLTITLANLRPTDLMIGVSVWRYL 100 (187)
T ss_dssp HTCCHHHHHHHHHHHHHCSEEEEECCGGGHHHHHHHHHHHHHT-TCCEEEECCCTHHHHHHHHTCCTTEEEEEECCSSCC
T ss_pred HhCCHHHHHHHHHHHHhCCEEEEEecCchHHHHHHHHHHHHhc-CCCEEEecCCchhHHHHHhcCCCCCEEEEEeCCCCC
Confidence 3456788999999999999999999999999999999999884 77777665 44554445567899999999999999
Q ss_pred HHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCcccccchhhHHHHHHHHHHHHHHHhcCC
Q 006659 380 ADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDT 449 (636)
Q Consensus 380 ~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~ 449 (636)
++++++++.||++|+++|+||++.+|||+++||++|.++.+... .+.|.+++++++.+|...+....
T Consensus 101 ~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~~~~~~~---~~~S~~~~~~l~d~L~~~~~~~~ 167 (187)
T 3sho_A 101 RDTVAALAGAAERGVPTMALTDSSVSPPARIADHVLVAATRGVG---HSLSPVGLIAVVNLLLAEIAVRE 167 (187)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESCTTSHHHHHCSEEEECCCCCSS---SSCCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCCcchhhCcEEEEecCCCCc---ccccHhHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999876543 35677888999999888887654
No 30
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=99.82 E-value=9.9e-20 Score=176.13 Aligned_cols=153 Identities=20% Similarity=0.271 Sum_probs=131.4
Q ss_pred ccccccchHHHHHHHcCCC-eEEEEeechhHHHHHHHHHHHHHhcCCcEEEeeccchhcc-cCCCCCCcEEEEEcCCCCC
Q 006659 302 KSVLLGGLKDHLKTIRRSR-RIVFIGCGTSYNAALAARPILEELSDLPVTMEIASDLVDR-QAPIYREDTAVFVSQSGET 379 (636)
Q Consensus 302 ~~l~~~~l~~~~~~l~~~~-~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~dlvI~iS~SG~t 379 (636)
+.++.++++++++.|.+++ +|+++|+|+|+.+|..+++.|.++ ++++....+.++.+. ...++++|++|++|+||+|
T Consensus 27 ~~l~~~~i~~~~~~i~~a~~~I~i~G~G~S~~~A~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~dvvI~iS~sG~t 105 (201)
T 3fxa_A 27 EVTSEEALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCI-ERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNT 105 (201)
T ss_dssp HHSCHHHHHHHHHHHHHCSSCEEEECCTHHHHHHHHHHHHHHHT-TCCEEECCHHHHTTTGGGGCCTTCEEEEECSSSCC
T ss_pred HhcCHHHHHHHHHHHHhcCCcEEEEEecHHHHHHHHHHHHHHhc-CCcEEEeCchHHHhhhhhcCCCCCEEEEEeCCCCC
Confidence 4566788999999999995 999999999999999999999985 788888777665433 3457899999999999999
Q ss_pred HHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCcc---cccchhhHHHHHHHHHHHHHHHhcCCCCcHHH
Q 006659 380 ADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEI---GVASTKAYTSQIVVMAMLALAIGGDTISTQAR 455 (636)
Q Consensus 380 ~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~---~~~~t~s~~~~~~~l~lL~~~~~~~~~~~~~~ 455 (636)
++++++++.||++|+++|+||++.+|||+++||++|.++.+.|. ....+.+.+++++++.+|...+...++.+.++
T Consensus 106 ~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~~~~~e~~~~~~~~~~s~~~~l~~~d~L~~~l~~~~g~~~~~ 184 (201)
T 3fxa_A 106 GELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYMNYTKEQ 184 (201)
T ss_dssp HHHHTTHHHHHHHTCEEEEEESCTTSHHHHHCSEEEECCCSCCCSTTSCSCHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHHHHHcCCeEEEEECCCCChhHHhCCEEEEcCCCccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 99999999999999999999999999999999999999887653 22457888999999999999988777655443
No 31
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=99.81 E-value=2.7e-19 Score=170.38 Aligned_cols=144 Identities=17% Similarity=0.208 Sum_probs=122.2
Q ss_pred ccccccchHHHHHHHcCCC-eEEEEeechhHHHHHHHHHHHHHhcCCcEEEeeccchhc-ccCCCCCCcEEEEEcCCCCC
Q 006659 302 KSVLLGGLKDHLKTIRRSR-RIVFIGCGTSYNAALAARPILEELSDLPVTMEIASDLVD-RQAPIYREDTAVFVSQSGET 379 (636)
Q Consensus 302 ~~l~~~~l~~~~~~l~~~~-~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~e~~~-~~~~~~~~dlvI~iS~SG~t 379 (636)
+.++. +++++++.|.+++ +|+++|+|+|+.+|..+++.+.++ +.++....+.+... ....++++|++|++|+||+|
T Consensus 32 ~~~~~-~i~~~~~~i~~a~~~I~i~G~G~S~~~a~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~d~vI~iS~sG~t 109 (183)
T 2xhz_A 32 QYINQ-NFTLACEKMFWCKGKVVVMGMGASGHIGRKMAATFAST-GTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGES 109 (183)
T ss_dssp GTSSH-HHHHHHHHHHTCSSCEEEEECHHHHHHHHHHHHHHHTT-TCCEEECCTTHHHHHTSTTCCTTCEEEEECSSSCC
T ss_pred HHHHH-HHHHHHHHHHhCCCeEEEEeecHHHHHHHHHHHHHHhc-CceEEEeCchHHhhhhhccCCCCCEEEEEeCCCCC
Confidence 34555 7899999999987 999999999999999999988875 67776666555433 23457899999999999999
Q ss_pred HHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCcc---cccchhhHHHHHHHHHHHHHHHhc
Q 006659 380 ADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEI---GVASTKAYTSQIVVMAMLALAIGG 447 (636)
Q Consensus 380 ~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~---~~~~t~s~~~~~~~l~lL~~~~~~ 447 (636)
++++++++.||++|+++|+||++.+|||+++||++|.++.+.|. ....+.+++++++++.+|...+..
T Consensus 110 ~~~~~~~~~ak~~g~~vi~IT~~~~s~la~~ad~~l~~~~~~e~~~~~~~~~~S~~~~~~~~d~L~~~~~~ 180 (183)
T 2xhz_A 110 SEITALIPVLKRLHVPLICITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLK 180 (183)
T ss_dssp HHHHHHHHHHHTTTCCEEEEESCTTSHHHHHSSEEEECCCSCCSSTTCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCChhHHhCCEEEEeCCCccccccCCCcchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999886653 345778899999998888877654
No 32
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=99.77 E-value=4.2e-18 Score=161.64 Aligned_cols=145 Identities=12% Similarity=0.143 Sum_probs=121.4
Q ss_pred ccccccchHHHHHHHcCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEeeccchhcccCCCCCCcEEEEEcCCCCCHH
Q 006659 302 KSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIASDLVDRQAPIYREDTAVFVSQSGETAD 381 (636)
Q Consensus 302 ~~l~~~~l~~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e 381 (636)
+.++.+.++++++.|.++++|+++|+|+|+.+|..+++.+.++ +.++...... ....++++|++|++|+||+|++
T Consensus 23 ~~l~~~~i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~-g~~~~~~~~~----~~~~~~~~d~vi~iS~sG~t~~ 97 (180)
T 1jeo_A 23 NDEWKNKLDSLIDRIIKAKKIFIFGVGRSGYIGRCFAMRLMHL-GFKSYFVGET----TTPSYEKDDLLILISGSGRTES 97 (180)
T ss_dssp CHHHHHHHHHHHHHHHHCSSEEEECCHHHHHHHHHHHHHHHHT-TCCEEETTST----TCCCCCTTCEEEEEESSSCCHH
T ss_pred HhCCHHHHHHHHHHHHhCCEEEEEeecHHHHHHHHHHHHHHHc-CCeEEEeCCC----ccccCCCCCEEEEEeCCCCcHH
Confidence 4566788999999999999999999999999999999999885 6676665432 1345789999999999999999
Q ss_pred HHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCcccccchhhHH--HHHHHHHHHHHHHhcCCCCcH
Q 006659 382 TLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYT--SQIVVMAMLALAIGGDTISTQ 453 (636)
Q Consensus 382 ~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~~~t~s~~--~~~~~l~lL~~~~~~~~~~~~ 453 (636)
++++++.||++|+++|+||++.+| |++.||++|.++. ++..+.++.+++ ++++++.+|...+....+...
T Consensus 98 ~~~~~~~ak~~g~~vi~IT~~~~s-l~~~ad~~l~~~~-~~~~~~~~~s~~~~~~~~~ld~L~~~~~~~~~~~~ 169 (180)
T 1jeo_A 98 VLTVAKKAKNINNNIIAIVCECGN-VVEFADLTIPLEV-KKSKYLPMGTTFEETALIFLDLVIAEIMKRLNLDE 169 (180)
T ss_dssp HHHHHHHHHTTCSCEEEEESSCCG-GGGGCSEEEECCC-CCBTTBCTTHHHHHHHHHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHCCCcEEEEeCCCCh-HHHhCCEEEEeCC-cccccccchhHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 999999999999999999999999 9999999999987 444455566664 567888888888877655433
No 33
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=99.77 E-value=1.9e-18 Score=166.83 Aligned_cols=144 Identities=22% Similarity=0.185 Sum_probs=115.1
Q ss_pred cccccchHHHHHHHcCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEeeccchhcccCCCCCCcEEEEEcCCCCCHHH
Q 006659 303 SVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIASDLVDRQAPIYREDTAVFVSQSGETADT 382 (636)
Q Consensus 303 ~l~~~~l~~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e~ 382 (636)
.++.++++++++.|.++++|+++|+|+|+.+|..+++.+.++ +.++..... . ....++++|++|++|+||+|+++
T Consensus 31 ~l~~~~l~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~-g~~~~~~~~--~--~~~~~~~~DvvI~iS~SG~t~~~ 105 (200)
T 1vim_A 31 HIDLETVGEMIKLIDSARSIFVIGAGRSGYIAKAFAMRLMHL-GYTVYVVGE--T--VTPRITDQDVLVGISGSGETTSV 105 (200)
T ss_dssp HCCHHHHHHHHHHHHHSSCEEEECSHHHHHHHHHHHHHHHHT-TCCEEETTS--T--TCCCCCTTCEEEEECSSSCCHHH
T ss_pred hcCHHHHHHHHHHHhcCCEEEEEEecHHHHHHHHHHHHHHhc-CCeEEEeCC--c--cccCCCCCCEEEEEeCCCCcHHH
Confidence 455678899999999999999999999999999999988775 566655432 2 13457899999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCcccc-------cchhhH--HHHHHHHHHHHHHHhcCCCC
Q 006659 383 LQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGV-------ASTKAY--TSQIVVMAMLALAIGGDTIS 451 (636)
Q Consensus 383 i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~-------~~t~s~--~~~~~~l~lL~~~~~~~~~~ 451 (636)
+++++.||++|+++|+||++.+|||+++||++|.++.+.+... .++.+. ++.++++.+|...+....+.
T Consensus 106 i~~~~~ak~~g~~vI~IT~~~~s~La~~ad~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~lld~L~~~~~~~~~~ 183 (200)
T 1vim_A 106 VNISKKAKDIGSKLVAVTGKRDSSLAKMADVVMVVKGKMKQERDEILSQLAPLGTMFELTAMIFLDALVAEIMMQKHL 183 (200)
T ss_dssp HHHHHHHHHHTCEEEEEESCTTSHHHHHCSEEEECCSSCTTCCHHHHHHHSGGGHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCeEEEEECCCCChHHHhCCEEEEECCcccccCCcccccccccccHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999988765421 123333 34466777777776654443
No 34
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=99.76 E-value=3.6e-18 Score=163.00 Aligned_cols=144 Identities=14% Similarity=0.102 Sum_probs=118.6
Q ss_pred ccccccchHHHHHHHcCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEeeccchhcccCCCCCCcEEEEEcCCCCCHH
Q 006659 302 KSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIASDLVDRQAPIYREDTAVFVSQSGETAD 381 (636)
Q Consensus 302 ~~l~~~~l~~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e 381 (636)
+.++.++++++++.|.++++|+++|+|+|+.+|..+++.+.++ +.++....... ...++++|++|++|+||+|++
T Consensus 20 ~~l~~~~i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~-g~~~~~~~~~~----~~~~~~~d~vI~iS~sG~t~~ 94 (186)
T 1m3s_A 20 AYISNEEADQLADHILSSHQIFTAGAGRSGLMAKSFAMRLMHM-GFNAHIVGEIL----TPPLAEGDLVIIGSGSGETKS 94 (186)
T ss_dssp TTCCHHHHHHHHHHHHHCSCEEEECSHHHHHHHHHHHHHHHHT-TCCEEETTSTT----CCCCCTTCEEEEECSSSCCHH
T ss_pred HhcCHHHHHHHHHHHHcCCeEEEEecCHHHHHHHHHHHHHHhc-CCeEEEeCccc----ccCCCCCCEEEEEcCCCCcHH
Confidence 3456678999999999999999999999999999999999885 56666654321 345789999999999999999
Q ss_pred HHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCccc-------ccchhhH--HHHHHHHHHHHHHHhcCCC
Q 006659 382 TLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIG-------VASTKAY--TSQIVVMAMLALAIGGDTI 450 (636)
Q Consensus 382 ~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~-------~~~t~s~--~~~~~~l~lL~~~~~~~~~ 450 (636)
++++++.||++|+++|+||++.+|||++.||++|.++.+.+.. ...+.+. +++++++.+|...+....+
T Consensus 95 ~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~~~~~~~~~~~~~~s~~~~~s~~~~~~~~~~d~L~~~~~~~~~ 172 (186)
T 1m3s_A 95 LIHTAAKAKSLHGIVAALTINPESSIGKQADLIIRMPGSPKDQSNGSYKTIQPMGSLFEQTLLLFYDAVILKLMEKKG 172 (186)
T ss_dssp HHHHHHHHHHTTCEEEEEESCTTSHHHHHCSEEEECSCCSCC-----CCCCSSTTHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCchHHhCCEEEEeCCccccCCCCcccccccCccHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999998866541 2234444 3567888888887765543
No 35
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=99.74 E-value=1.3e-17 Score=171.44 Aligned_cols=163 Identities=23% Similarity=0.265 Sum_probs=125.8
Q ss_pred HHHHHHHhcHHHHHHHhhccccccCCcccccccccchHHHHHHHcCCCeEEEEeechhHHHH-HHHHHHHHHhcCC-c-E
Q 006659 273 YMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAA-LAARPILEELSDL-P-V 349 (636)
Q Consensus 273 ~m~keI~eqp~~l~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~l~~~~~I~i~G~G~S~~aa-~~~~~~~~~~~~~-~-~ 349 (636)
.+.++..+++..+.+++.. ++ +.++++++.|.++++|+++|+|+|+.+| ..+.+++.+++.. . +
T Consensus 38 ~i~~e~~~~~~ai~~t~~~------------i~-~~i~~i~~~l~~a~rI~~~G~G~S~~lA~~~a~~~~~~~g~~~~~~ 104 (306)
T 1nri_A 38 LMNEEDKLVPLAIESCLPQ------------IS-LAVEQIVQAFQQGGRLIYIGAGTSGRLGVLDASECPPTFGVSTEMV 104 (306)
T ss_dssp HHHHHHTHHHHHHHHHHHH------------HH-HHHHHHHHHHHTTCCEEEEESHHHHHHHHHHHHHHHHHHCCCTTSE
T ss_pred HHHHHHHHHHHHHHHHHHH------------HH-HHHHHHHHHHHcCCEEEEEeccHhHHHHHHHHHhcccccCCCHHHH
Confidence 4555556677777776532 22 5678999999999999999999999999 4577777776421 1 1
Q ss_pred -EEee------------ccchh------cccCCCCCCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccc
Q 006659 350 -TMEI------------ASDLV------DRQAPIYREDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARK 410 (636)
Q Consensus 350 -~~~~------------~~e~~------~~~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ 410 (636)
.... ..+.. .....++++|++|+||+||+|++++++++.||++|+++|+||++++|||+++
T Consensus 105 ~~l~~~g~~a~~~a~e~~ed~~~~~~~~l~~~~l~~~DvvI~IS~SG~T~~vi~al~~Ak~~Ga~~IaIT~~~~S~La~~ 184 (306)
T 1nri_A 105 KGIIAGGECAIRHPVEGAEDNTKAVLNDLQSIHFSKNDVLVGIAASGRTPYVIAGLQYAKSLGALTISIASNPKSEMAEI 184 (306)
T ss_dssp EEEETTCTHHHHSCCTTGGGCTTHHHHHHHHTTCCTTSEEEEECTTSCCHHHHHHHHHHHHHTCEEEEEESSTTCHHHHH
T ss_pred HHHHhcchHHHhhhhhcccCcHHHHHHHHHhcCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCChHHHh
Confidence 0110 01111 1123578999999999999999999999999999999999999999999999
Q ss_pred cCeeEEcCCCCccccc--chhhHHHHHHHHHHHHHHHhcC
Q 006659 411 THCGVHINAGAEIGVA--STKAYTSQIVVMAMLALAIGGD 448 (636)
Q Consensus 411 ad~~l~~~~~~e~~~~--~t~s~~~~~~~l~lL~~~~~~~ 448 (636)
||++|.++.++|.... .+++++++++++.+|...+...
T Consensus 185 AD~~I~~~~g~E~~~~st~~~s~ta~~~vl~~L~~~~~~~ 224 (306)
T 1nri_A 185 ADIAIETIVGPEILTGSSRLKSGTAQKMVLNMLTTASMIL 224 (306)
T ss_dssp SSEEEECCCCSCSSTTCTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEcCCCCccccCcccchhHHHHHHHHHHHHHHHHHH
Confidence 9999999888876443 3689999999999988887654
No 36
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=99.73 E-value=3.8e-17 Score=159.24 Aligned_cols=141 Identities=16% Similarity=0.217 Sum_probs=109.1
Q ss_pred HHHHHHHHHhcHHHHHHHhhccccccCCcccccccccchHHHHH----HHcCCCeEEEEeechhHHHHHHHHH------H
Q 006659 271 EHYMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLK----TIRRSRRIVFIGCGTSYNAALAARP------I 340 (636)
Q Consensus 271 ~~~m~keI~eqp~~l~~~l~~~~~~~~~~~~~~l~~~~l~~~~~----~l~~~~~I~i~G~G~S~~aa~~~~~------~ 340 (636)
.++|.+++.++++.+++++....+ .+.++++++ .+.++++|+++|+|+|+.+|..++. .
T Consensus 23 ~~~~~~~i~~~~~~l~~~~~~~~~-----------~~~i~~~~~~i~~~l~~~~~I~i~G~G~S~~~A~~~a~~l~~~~~ 91 (212)
T 2i2w_A 23 QDLIRNELNEAAETLANFLKDDAN-----------IHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYR 91 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHHH-----------HHHHHHHHHHHHHHHHTTCCEEEEESTHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccc-----------HHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHhhhc
Confidence 568999999999999998753111 233445544 4789999999999999999987762 2
Q ss_pred HHHhcCCcEEEee-ccch-------h------cc-cCCCCCCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCC
Q 006659 341 LEELSDLPVTMEI-ASDL-------V------DR-QAPIYREDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGS 405 (636)
Q Consensus 341 ~~~~~~~~~~~~~-~~e~-------~------~~-~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s 405 (636)
+.+ .++++.... +..+ . .. ...++++|++|++|+||+|++++++++.||++|+++|+||++.+|
T Consensus 92 ~~~-~g~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvvI~iS~SG~t~~~i~~~~~ak~~G~~vIaIT~~~~s 170 (212)
T 2i2w_A 92 ENR-PGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGG 170 (212)
T ss_dssp TTS-SSCSEEECCCTTCGGGGSCCCSCSSHHHHHHHHHCCTTCEEEEECSSSCCHHHHHHHHHHHHHTCEEEEEEETTCG
T ss_pred ccC-CCCeEEecCChHHhhHhhccCCHHHHHHHHHHhcCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCeEEEEECCCCC
Confidence 222 356666654 3221 1 00 123689999999999999999999999999999999999999999
Q ss_pred ccccccCeeEEcCCCCcc
Q 006659 406 AIARKTHCGVHINAGAEI 423 (636)
Q Consensus 406 ~La~~ad~~l~~~~~~e~ 423 (636)
||+++||++|.++.|++.
T Consensus 171 ~La~~aD~~l~~~~g~e~ 188 (212)
T 2i2w_A 171 KMAGTADIEIRVPHFGYA 188 (212)
T ss_dssp GGTTCSSEEEEECCCSCH
T ss_pred chHHhCCEEEEcCCCCch
Confidence 999999999999886553
No 37
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=99.71 E-value=2e-16 Score=152.09 Aligned_cols=135 Identities=18% Similarity=0.191 Sum_probs=107.4
Q ss_pred cchHHHHHHHcCCCeEEEEeechhHHHHHHHHHHHHH-----hcCCcEEEeecc---------chhcc-------cCCCC
Q 006659 307 GGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEE-----LSDLPVTMEIAS---------DLVDR-------QAPIY 365 (636)
Q Consensus 307 ~~l~~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~~-----~~~~~~~~~~~~---------e~~~~-------~~~~~ 365 (636)
+.++++++.+.++++|+++|+|+|+.+|..+.+.+.. ..++++....+. +..+. ...++
T Consensus 29 ~~~~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~a~~~d~~~~~~~~~~~~~~~~ 108 (196)
T 2yva_A 29 RAAMTLVQSLLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQVRALGH 108 (196)
T ss_dssp HHHHHHHHHHHTTCCEEEEESTHHHHHHHHHHHHHHTCSSSCCCCCCEEESSCCHHHHHHHTTSTTGGGHHHHHHHHHCC
T ss_pred HHHHHHHHHHHcCCEEEEEeCchhhHHHHHHHHHHhccccccCCCCceEeecCchHHHHHHhcCCCHHHHHHHHHHhcCC
Confidence 6788999999999999999999999999999987772 246776665421 22111 13468
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccc---cCeeEEcCCCCcccccchhhHHHHHHHHHHHH
Q 006659 366 REDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARK---THCGVHINAGAEIGVASTKAYTSQIVVMAMLA 442 (636)
Q Consensus 366 ~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~---ad~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~ 442 (636)
++|++|++|+||+|++++++++.||++|+++|+||++.+|||+++ ||++|.++.... .....++++++.+|.
T Consensus 109 ~~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~la~~~~~ad~~l~~~~~~~-----~~~~~~~l~~~~~L~ 183 (196)
T 2yva_A 109 AGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIRIPSHRS-----ARIQEMHMLTVNCLC 183 (196)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCHHHHTTCCTTSEEEECSCSCH-----HHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCchhhhcccCCCEEEEeCCCCh-----hHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999 999999876321 112337777777776
Q ss_pred HHHh
Q 006659 443 LAIG 446 (636)
Q Consensus 443 ~~~~ 446 (636)
..+.
T Consensus 184 ~~~~ 187 (196)
T 2yva_A 184 DLID 187 (196)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 38
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=99.70 E-value=1.4e-16 Score=153.71 Aligned_cols=131 Identities=20% Similarity=0.224 Sum_probs=104.4
Q ss_pred HHHHHHHcCCCeEEEEeechhHHHHHHHHHHH------HHhcCCcEEEeecc---------chhcc-------cCCCCCC
Q 006659 310 KDHLKTIRRSRRIVFIGCGTSYNAALAARPIL------EELSDLPVTMEIAS---------DLVDR-------QAPIYRE 367 (636)
Q Consensus 310 ~~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~------~~~~~~~~~~~~~~---------e~~~~-------~~~~~~~ 367 (636)
+.+++.+.++++|+++|+|+|+.+|..+++.+ .+ .++++....+. +..+. ...++++
T Consensus 36 ~~i~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~~~~~~-~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 114 (199)
T 1x92_A 36 LVMVNALLNEGKILSCGNGGSAGDAQHFSSELLNRFERER-PSLPAVALTTDSSTITSIANDYSYNEVFSKQIRALGQPG 114 (199)
T ss_dssp HHHHHHHHTTCCEEEECSTHHHHHHHHHHHHHHTCSSSCC-CCCCEEETTCCHHHHHHHHHHTCGGGTTHHHHHHHCCTT
T ss_pred HHHHHHHHCCCEEEEEcCchhHHHHHHHHHHHhcCcccCC-CCCceEecCCChhHHHHhhcCccHHHHHHHHHHhCCCCC
Confidence 44447888999999999999999999998888 33 46676665432 22111 1346899
Q ss_pred cEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccc---cCeeEEcCCCCcccccchhhHHHHHHHHHHHHHH
Q 006659 368 DTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARK---THCGVHINAGAEIGVASTKAYTSQIVVMAMLALA 444 (636)
Q Consensus 368 dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~---ad~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~ 444 (636)
|++|++|+||+|++++++++.||++|+++|+||++.+|||+++ ||++|.++.+.+.. .++++++++.+|...
T Consensus 115 DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~La~~~~~ad~~l~~~~~~~~~-----~~~~~l~i~~~L~~~ 189 (199)
T 1x92_A 115 DVLLAISTSGNSANVIQAIQAAHDREMLVVALTGRDGGGMASLLLPEDVEIRVPSKITAR-----IQEVHLLAIHCLCDL 189 (199)
T ss_dssp CEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHCCTTCEEEECSCSCHHH-----HHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCcHHhccccCCEEEEeCCCchHH-----HHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 99999998754421 266777777777766
Q ss_pred Hh
Q 006659 445 IG 446 (636)
Q Consensus 445 ~~ 446 (636)
+.
T Consensus 190 ~~ 191 (199)
T 1x92_A 190 ID 191 (199)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 39
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=99.68 E-value=4.7e-16 Score=149.72 Aligned_cols=158 Identities=19% Similarity=0.245 Sum_probs=116.4
Q ss_pred HHHHHHHHhcHHHHHHHhhccccccCCcccccccccchHHHHHHH----cCCCeEEEEeechhHHHHHHHHHHHH-H--h
Q 006659 272 HYMQKEIHEQPESLTTTMRGRLIRGGSCKAKSVLLGGLKDHLKTI----RRSRRIVFIGCGTSYNAALAARPILE-E--L 344 (636)
Q Consensus 272 ~~m~keI~eqp~~l~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~l----~~~~~I~i~G~G~S~~aa~~~~~~~~-~--~ 344 (636)
+++.+.+.++++.+.++... .++.+.++++++.+ .++++|+++|+|+|+.+|..++..+. + +
T Consensus 8 ~~~~~~~~~~~~~l~~~~~~-----------~~~~~~i~~~~~~i~~~i~~~~~I~i~G~G~S~~~A~~~~~~l~~~~~~ 76 (198)
T 2xbl_A 8 TYITNSIAEAQRVMAAMLAD-----------ERLLATVRKVADACIASIAQGGKVLLAGNGGSAADAQHIAGEFVSRFAF 76 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHTC-----------HHHHHHHHHHHHHHHHHHHTTCCEEEECSTHHHHHHHHHHHHHHSCSSS
T ss_pred HHHHHHHHHHHHHHHHHhhh-----------hhhHHHHHHHHHHHHHHHHcCCEEEEEeCcHhhHHHHHHHHHHHhhhcc
Confidence 46777788888888887640 12234556666554 78999999999999999988864332 1 1
Q ss_pred --cCCcEEEee--cc-------chhc-------ccCCCCCCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCc
Q 006659 345 --SDLPVTMEI--AS-------DLVD-------RQAPIYREDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSA 406 (636)
Q Consensus 345 --~~~~~~~~~--~~-------e~~~-------~~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~ 406 (636)
.++++.... +. ++.+ ....++++|++|++|+||+|++++++++.||++|+++|+||++.+||
T Consensus 77 ~~~g~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vI~iS~SG~t~~~~~~~~~ak~~g~~vI~IT~~~~s~ 156 (198)
T 2xbl_A 77 DRPGLPAVALTTDTSILTAIGNDYGYEKLFSRQVQALGNEGDVLIGYSTSGKSPNILAAFREAKAKGMTCVGFTGNRGGE 156 (198)
T ss_dssp CCCCCCEEETTCCHHHHHHHHHHHCGGGTTHHHHHHHCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECSCCCT
T ss_pred CCCCCceEEecCChHHHHHhhccCCHHHHHHHHHHhhCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEEECCCCCc
Confidence 245666553 11 1111 11236899999999999999999999999999999999999999999
Q ss_pred cccccCeeEEcCCCCcccccchhhHHHHHHHHHHHHHHH
Q 006659 407 IARKTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAI 445 (636)
Q Consensus 407 La~~ad~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~ 445 (636)
|+++||++|.++.+.+. ..+.+++.++.+|...+
T Consensus 157 L~~~ad~~l~~~~~~~~-----~~~~~~l~i~~~L~~~~ 190 (198)
T 2xbl_A 157 MRELCDLLLEVPSADTP-----KIQEGHLVLGHIVCGLV 190 (198)
T ss_dssp HHHHCSEEEECSCSSHH-----HHHHHHHHHHHHHHHHH
T ss_pred HHHhCCEEEEeCCCcHH-----HHHHHHHHHHHHHHHHH
Confidence 99999999999875532 24666777776666554
No 40
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=99.61 E-value=8.5e-16 Score=152.96 Aligned_cols=138 Identities=12% Similarity=0.085 Sum_probs=99.4
Q ss_pred cchHHHHH----HHcCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEeecc-------------c-------hhcccC
Q 006659 307 GGLKDHLK----TIRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIAS-------------D-------LVDRQA 362 (636)
Q Consensus 307 ~~l~~~~~----~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~-------------e-------~~~~~~ 362 (636)
+.++++++ .+.++++|+++|+|+|+.+|..+.+.+.++....... .+. + ......
T Consensus 26 ~~i~~a~~~l~~~i~~~~~I~i~G~G~S~~~A~~~~~~l~~l~~~~~~~-~~~~~l~~~~~~~~~~e~~~g~~~~~~~~~ 104 (243)
T 3cvj_A 26 QAIIKGAHLVSEAVMNGGRFYVFGSGHSHMIAEEIYNRAGGLALVTAIL-PPELMLHERPNKSTYLERIEGLSKSYLKLH 104 (243)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESGGGHHHHHHTSSSTTCBTTEEECC-CGGGSSSSSTTHHHHHTTCTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhccccccCccc-chhhhccCCchhhhhhhhcccHHHHHHHHh
Confidence 34555544 4567899999999999988877766544432212111 111 0 011234
Q ss_pred CCCCCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCC-----------ccccccCeeEEcCCCC-cc-------
Q 006659 363 PIYREDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGS-----------AIARKTHCGVHINAGA-EI------- 423 (636)
Q Consensus 363 ~~~~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s-----------~La~~ad~~l~~~~~~-e~------- 423 (636)
.++++|++|++|+||+|++++++++.||++|++||+||++.+| ||+++||++|.++.+. |.
T Consensus 105 ~~~~~Dv~I~iS~SG~t~~~i~~~~~Ak~~G~~vI~IT~~~~s~~~~~~~~~g~~La~~aD~~l~~~~~~~e~~~~~~~~ 184 (243)
T 3cvj_A 105 QVTNKDVIMIISNSGRNTVPVEMAIESRNIGAKVIAMTSMKHSQKVTSRHKSGKKLYEYADVVLDNGAPVGDAGFQIANS 184 (243)
T ss_dssp TCCTTCEEEEECSSCCSHHHHHHHHHHHHHTCEEEEEECHHHHHHSCCCSTTSCCGGGGCSEEEECCCCTTSCCEECSSS
T ss_pred cCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccccCCCcCcHHHhCCEEEECCCCcccceeeccCc
Confidence 4789999999999999999999999999999999999999777 9999999999987754 32
Q ss_pred --cccchhhHHHHHHHHHHHHHHHh
Q 006659 424 --GVASTKAYTSQIVVMAMLALAIG 446 (636)
Q Consensus 424 --~~~~t~s~~~~~~~l~lL~~~~~ 446 (636)
....+.+ +++++++.+|...+.
T Consensus 185 ~~~~~~~s~-~~~~~il~~L~~~~~ 208 (243)
T 3cvj_A 185 EIYSGATSD-SIGCFLAQALIVETL 208 (243)
T ss_dssp SCEECCCHH-HHHHHHHHHHHHHHH
T ss_pred cccCCcHHH-HHHHHHHHHHHHHHH
Confidence 2233443 777777777766554
No 41
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=99.61 E-value=4.8e-15 Score=141.40 Aligned_cols=115 Identities=21% Similarity=0.273 Sum_probs=89.7
Q ss_pred cchHHHHH----HHcCCCeEEEEeechhHHHHHHHHHHHHH---h--cCCcEEEee--ccch-------------h-ccc
Q 006659 307 GGLKDHLK----TIRRSRRIVFIGCGTSYNAALAARPILEE---L--SDLPVTMEI--ASDL-------------V-DRQ 361 (636)
Q Consensus 307 ~~l~~~~~----~l~~~~~I~i~G~G~S~~aa~~~~~~~~~---~--~~~~~~~~~--~~e~-------------~-~~~ 361 (636)
++++++++ .+.++++|+++|+|+|+.+|..++..+.. + .++++.... +..+ . ...
T Consensus 26 ~~i~~~~~~i~~~l~~~~~I~i~G~G~S~~~a~~~~~~l~~~~~~~~~g~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 105 (188)
T 1tk9_A 26 GQIAKVGELLCECLKKGGKILICGNGGSAADAQHFAAELSGRYKKERKALAGIALTTDTSALSAIGNDYGFEFVFSRQVE 105 (188)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESTHHHHHHHHHHHHHHSCSSSCCCCCCEEESSCCHHHHHHHHHHTCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeCcHhHHHHHHHHHHHhhhhccCCCCCceEeccCCchhHhhhhcCCCHHHHHHHHHH
Confidence 44556655 66779999999999999999888753311 1 245665553 2110 0 012
Q ss_pred CCCCCCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCC
Q 006659 362 APIYREDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGA 421 (636)
Q Consensus 362 ~~~~~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~ 421 (636)
..++++|++|++|+||+|++++++++.||++|+++|+||++++|||+++||++|.++.+.
T Consensus 106 ~~~~~~Dvvi~iS~sG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~L~~~ad~~l~~~~~~ 165 (188)
T 1tk9_A 106 ALGNEKDVLIGISTSGKSPNVLEALKKAKELNMLCLGLSGKGGGMMNKLCDHNLVVPSDD 165 (188)
T ss_dssp HHCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEEEGGGTTHHHHCSEEEEESCSC
T ss_pred HhCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCcchHHcCCEEEEeCCCC
Confidence 236899999999999999999999999999999999999999999999999999998754
No 42
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=99.60 E-value=1.2e-14 Score=139.96 Aligned_cols=135 Identities=16% Similarity=0.182 Sum_probs=100.9
Q ss_pred chHHHHHH----HcCCCeEEEEeechhHHHHHHHHHHHHH-----hcCCcEEEeeccc---------hhc------c-cC
Q 006659 308 GLKDHLKT----IRRSRRIVFIGCGTSYNAALAARPILEE-----LSDLPVTMEIASD---------LVD------R-QA 362 (636)
Q Consensus 308 ~l~~~~~~----l~~~~~I~i~G~G~S~~aa~~~~~~~~~-----~~~~~~~~~~~~e---------~~~------~-~~ 362 (636)
+++++++. ++++++|+++|+|+|...|..+++.|.. -.++++....+.. +.+ . ..
T Consensus 31 ~i~~a~~~i~~al~~~~~I~i~G~G~S~~~A~~~~~~l~~~~~~~r~g~~~~~~~~d~~~~~a~~~d~~~~~~~~~~l~~ 110 (201)
T 3trj_A 31 AIAQAAKAMVSCLENGGKVLVCGNGSSGVIAQHFTSKLLNHFEMERPPLPAIALTGDVATITAVGNHYGFSQIFAKQVAA 110 (201)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESTHHHHHHHHHHHHHHC-------CCCEEETTSCHHHHHHHHHHTCGGGTTHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeCcHhHHHHHHHHHHhcCccCCCCCCCceEEccCChHHHHHhccCCCHHHHHHHHHHh
Confidence 45566655 5667999999999999999988887762 1366666643211 100 0 11
Q ss_pred CCCCCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCcccccc---CeeEEcCCCCcccccchhhHHHHHHHHH
Q 006659 363 PIYREDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARKT---HCGVHINAGAEIGVASTKAYTSQIVVMA 439 (636)
Q Consensus 363 ~~~~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~a---d~~l~~~~~~e~~~~~t~s~~~~~~~l~ 439 (636)
.++++|++|++|+||+|++++++++.||++|+++|+||++++|||+++| |++|.++.... .....+++.++.
T Consensus 111 ~~~~~Dvvi~iS~SG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~la~~a~~~d~~l~~~~~~~-----~~~~~~~l~i~~ 185 (201)
T 3trj_A 111 LGNEDDILLVITTSGDSENILSAVEEAHDLEMKVIALTGGSGGALQNMYNTDDIELRVPSDNI-----ANIQENHFLIVH 185 (201)
T ss_dssp HCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEEETTCCGGGGTCCTTCEEEEESCCCH-----HHHHHHHHHHHH
T ss_pred hCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEECCCCCHHHHhhccCCEEEEeCCCCc-----hHHHHHHHHHHH
Confidence 3689999999999999999999999999999999999999999999999 99999876432 122445666666
Q ss_pred HHHHHHhc
Q 006659 440 MLALAIGG 447 (636)
Q Consensus 440 lL~~~~~~ 447 (636)
+|...+.+
T Consensus 186 ~l~~~v~~ 193 (201)
T 3trj_A 186 CLCDIIDQ 193 (201)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 66655543
No 43
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=99.60 E-value=1.7e-16 Score=173.81 Aligned_cols=105 Identities=12% Similarity=0.147 Sum_probs=91.7
Q ss_pred cccc-ceEEEeeecCCCCCCCCCCCCCcccCCCCcEEEEEcceecChH---HHHHHHHhCCCccccCCHhhHHHHHHHHH
Q 006659 93 SFSI-HAGIAHTRWATHGEPAPRNSHPQTSGAGNEFLVVHNGVITNYE---VLKETLIRHGFTFESETDTEVIPKLAKFV 168 (636)
Q Consensus 93 ~~~~-~~~igH~R~aT~g~~~~~n~qPf~~~~~~~~~~~hNG~i~N~~---~l~~~l~~~g~~~~~~tDsE~i~~l~~~~ 168 (636)
.+.| .++|||+||+|.+ ..|+||+... .++++++ |+|||+. +||++|. | .|.+.||||+|+++|.
T Consensus 22 ~~~g~~~~igh~R~~t~~---~~~~QP~~~~-~~~~~l~--GeI~N~~~~~eLr~~l~--g-~f~s~sDtEvil~l~~-- 90 (503)
T 1q15_A 22 DFDGKGEALSNGYLFIEQ---NGHYQKCEME-RGTAYLI--GSLYNRTFLIGLAGVWE--G-EAYLANDAELLALLFT-- 90 (503)
T ss_dssp TSCEEEEEETTEEEEEET---TCCEEEEECS-SSEEEEE--ECCSCHHHHHHHHTTTC--G-GGGGCCHHHHHHHHHH--
T ss_pred hccCCceeEeeeeEEEcC---CCCCCCcCcC-CCeEEEE--EEEeCCCChHHHHHHhh--C-CCCCCChHHHHHHHHH--
Confidence 4567 9999999999985 3789999876 6678888 9999999 9999986 5 7899999999999998
Q ss_pred HhhccccCCCCCCCHHHHHHHHHHHhhhhhheeEEecCCCCeEEEEEcC---CceEEEecc
Q 006659 169 FDKANEEEGDQPVTFSQVVVEVMRHLEGAYALIFKSQHYPNELIACKRG---SPLLLGVKD 226 (636)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~a~~~~d~~~~~~l~~~Rd~---~pL~~G~~~ 226 (636)
+|| .+++++|+|+|||++||.. .+ |+++||+ +|||+|..+
T Consensus 91 --~~g--------------~~~l~~l~G~fa~~i~d~~-~~-l~~aRD~~G~rPL~y~~~~ 133 (503)
T 1q15_A 91 --RLG--------------ANALALAEGDFCFFIDEPN-GE-LTVITESRGFSPVHVVQGK 133 (503)
T ss_dssp --HHC--------------GGGGGGCCSSEEEEEECTT-SC-EEEEECSSSSSCCEEEESS
T ss_pred --HHH--------------HHHHHHcCEEEEEEEEeCC-CC-EEEEECCCCCeeEEEEEeC
Confidence 455 5799999999999999976 46 9999996 999999765
No 44
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=99.56 E-value=9.2e-16 Score=168.30 Aligned_cols=101 Identities=19% Similarity=0.256 Sum_probs=83.6
Q ss_pred eeecCCCCC---CCCCCCCCcccC---CCCcEEEEEcceecChHHHHHHHHhCCCccccCCHhhHHHHHHHHHHhhcccc
Q 006659 102 HTRWATHGE---PAPRNSHPQTSG---AGNEFLVVHNGVITNYEVLKETLIRHGFTFESETDTEVIPKLAKFVFDKANEE 175 (636)
Q Consensus 102 H~R~aT~g~---~~~~n~qPf~~~---~~~~~~~~hNG~i~N~~~l~~~l~~~g~~~~~~tDsE~i~~l~~~~~~~~~~~ 175 (636)
|.|++|.|. .+..-+||+... ..++++++|||+|||+.+||++|. +.|.+.||||+|+++|. +||
T Consensus 40 ~~r~p~~~~~~~~~~~~~QP~~~~~Pf~~~~~~lv~NGeIyN~~eLr~~L~---~~f~t~sDtEvil~l~~----~~g-- 110 (513)
T 1jgt_A 40 PQGERSLAATLVHAPSVAPDRAVARSLTGAPTTAVLAGEIYNRDELLSVLP---AGPAPEGDAELVLRLLE----RYD-- 110 (513)
T ss_dssp TTGGGSCEEEEEECTTSCGGGGEEEECSSSSEEEEEEEEESCHHHHHHTSC---SSCCCSSHHHHHHHHHH----HHG--
T ss_pred ccCCCccccceeeCCccCCCcccCCcCCCCCEEEEEEEEEeCHHHHHHHhC---CCCCCCCHHHHHHHHHH----HHh--
Confidence 677777654 222346888765 136899999999999999999992 78999999999999998 455
Q ss_pred CCCCCCCHHHHHHHHHHHhhhhhheeEEecCCCCeEEEEEcC---CceEEEecc
Q 006659 176 EGDQPVTFSQVVVEVMRHLEGAYALIFKSQHYPNELIACKRG---SPLLLGVKD 226 (636)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~l~G~~a~~~~d~~~~~~l~~~Rd~---~pL~~G~~~ 226 (636)
.+++++|+|+|||++||. ++|+++||+ +|||+|..+
T Consensus 111 ------------~~~~~~l~G~fA~~i~d~---~~l~~aRD~~G~kPLyy~~~~ 149 (513)
T 1jgt_A 111 ------------LHAFRLVNGRFATVVRTG---DRVLLATDHAGSVPLYTCVAP 149 (513)
T ss_dssp ------------GGGGGTCCEEEEEEEEET---TEEEEEECTTCCSCCEEEEET
T ss_pred ------------HHhHhhcCeeEEEEEEEC---CEEEEEECCCCCceeEEEEeC
Confidence 579999999999999995 459999997 899999876
No 45
>1wiw_A Glucose-6-phosphate isomerase like protein; riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.80.1.1
Probab=99.46 E-value=7.9e-13 Score=133.13 Aligned_cols=216 Identities=13% Similarity=0.047 Sum_probs=144.0
Q ss_pred cCCCCCCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCe----eEEcCCCCcccccchhhHHHHHH
Q 006659 361 QAPIYREDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARKTHC----GVHINAGAEIGVASTKAYTSQIV 436 (636)
Q Consensus 361 ~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~----~l~~~~~~e~~~~~t~s~~~~~~ 436 (636)
+.+.++.|+||++| +++.|.++|+++|+||+ +.+|.+.|.- ++.++.+. .+......+
T Consensus 57 P~wvg~~dlvia~S----------a~~~A~rrGa~vv~vts--gG~L~~~a~~~~~~~v~vp~~~-----~pR~al~~l- 118 (290)
T 1wiw_A 57 PDWGEEGTLFLLEG----------GYDLGEAAGMALLAETG--RARVVRVGFRPGVEVHIPPSPL-----APYRYLRFL- 118 (290)
T ss_dssp CSCCSSSEEEEEEC----------SSCTTSCSTTC--CCCT--TCEEEEEESSTTCSEECCCCTT-----HHHHHHHHH-
T ss_pred CCccCCCCEEEEec----------HHHHHHHcCCeEEEECC--CChHHHHHhhCCCCEEeCCCCC-----CCHHHHHHH-
Confidence 35678999999999 78899999999999998 5599988652 33333211 122222222
Q ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHhhhHHHHHHHHhc-hHHHHHHHHHhcCCCeEEEEeCCCCHHHHHHHHHHHHHh
Q 006659 437 VMAMLALAIGGDTISTQARREAIIDGLCDLPNKVREVLKL-DQEMKVLAKQLIAEQSLLVFGRGYNYATALEGALKVKEV 515 (636)
Q Consensus 437 ~l~lL~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~-~~~~~~~a~~l~~~~~~~~lG~G~~~~~A~e~alKl~E~ 515 (636)
.++ .. ...+.++..+.+.+..+......+. .+.++.+|.++.+...+++ ++ ...++|+.++..|.|+
T Consensus 119 --~~l-----~~---~~~~l~~~a~~l~~~a~~~~p~~~~~~NpAK~LA~~L~~~~Pvi~-~~-~~~~~A~R~k~~l~en 186 (290)
T 1wiw_A 119 --LLA-----TG---REEVLRSVDEALLEERRRLGPEVPVEENPAKFLAYTLLERLPLFY-SP-LFRPLEGAVQTLFARV 186 (290)
T ss_dssp --HHH-----TT---CHHHHHHHHHHHHHHHTTTSTTSCGGGCHHHHHHHHHTTSEEEEE-CT-TCTHHHHHHHHHHHHT
T ss_pred --HHh-----cC---chhhHHHHHHHHHHHHHhcCCccccccCHHHHHHHHHhCCCcEEE-ec-CcHHHHHHHHHHHHHh
Confidence 111 11 3444555555555544433333332 6889999999988877777 77 8899999999999999
Q ss_pred ccccccccccccccccc--cccccC-----CCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcce
Q 006659 516 ALMHSEGILAGEMKHGP--LALVDE-----NLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCR 588 (636)
Q Consensus 516 ~~~~a~~~~~~Ef~HGp--~~~~~~-----~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~ 588 (636)
++.+|.... ..|+. +..++. ....+++..+ .+++.-..+.+++++..++.+...+
T Consensus 187 Ak~~a~~~~---~~Hne~~i~~~~~p~~~~~~~~~v~l~d---~~r~~~~~~i~~~~~~~v~~v~~~g------------ 248 (290)
T 1wiw_A 187 AKSLSLTPP---PSALEFFLVGLEARHEQGDPLAAVLLGP---GEEAALAKEILESRVDALAEVPATG------------ 248 (290)
T ss_dssp TCCCCBCCC---SSHHHHHHHTTSSCGGGGTTEEEEEESC---SHHHHHHHHHHTTTSSEEEEECCCS------------
T ss_pred cCCCccccc---cccChhhhccccCccccccceEEEEecc---hhHHHHHHHHHHhcCCceEEEeCCC------------
Confidence 999999976 99988 655552 2234444443 4454333344466777777664432
Q ss_pred EEEcCCCCcchhhHHHHH-HHHHHHHHHHHHcCCCCCCCCCCcc
Q 006659 589 VIEVPQVEDCLQPVINIV-PLQLLAYHLTVLRGYNVDQPRNLAK 631 (636)
Q Consensus 589 ~~~~p~~~~~~~~~~~~v-~~q~la~~lA~~~G~~pd~pr~l~k 631 (636)
.+.+..+++++ .+.+.|+|||+.+|+||.....+.+
T Consensus 249 -------~s~L~~l~~Li~~~d~asvYLAl~~G~DP~~~~~I~~ 285 (290)
T 1wiw_A 249 -------ANRLAQVMALWYRMAWTAYYLALLYGVDPGDHGLLER 285 (290)
T ss_dssp -------SSHHHHHHHHHHHHHHHHHHHHHHHTCCCSCCCSCC-
T ss_pred -------CCHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHH
Confidence 23566777666 4699999999999999998877764
No 46
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=98.99 E-value=2e-09 Score=103.45 Aligned_cols=154 Identities=12% Similarity=0.152 Sum_probs=121.8
Q ss_pred HHHHHHHhc--hHHHHHHHHHhcCCC-eEEEEeCCCCHHHHHHHHHHHHHhccccccccccccccccccccccCCCCeEE
Q 006659 468 NKVREVLKL--DQEMKVLAKQLIAEQ-SLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILV 544 (636)
Q Consensus 468 ~~~~~~~~~--~~~~~~~a~~l~~~~-~~~~lG~G~~~~~A~e~alKl~E~~~~~a~~~~~~Ef~HGp~~~~~~~~~vi~ 544 (636)
+.++++.+. .+.++++++.+...+ +++++|.|.++.+|.+++.+|... ++++..+...++.|++...+++++.+|+
T Consensus 20 ~~l~~t~~~l~~~~i~~~~~~i~~a~~~I~i~G~G~S~~~A~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~dvvI~ 98 (201)
T 3fxa_A 20 NAISRLPEVTSEEALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCI-ERPAVFLTPSDAVHGTLGVLQKEDILIL 98 (201)
T ss_dssp HHHHTHHHHSCHHHHHHHHHHHHHCSSCEEEECCTHHHHHHHHHHHHHHHT-TCCEEECCHHHHTTTGGGGCCTTCEEEE
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCcEEEEEecHHHHHHHHHHHHHHhc-CCcEEEeCchHHHhhhhhcCCCCCEEEE
Confidence 334444432 466788888888884 999999999999999999999985 7899999889999999988999999888
Q ss_pred EEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcceEEEcCCCCc--------chhhHHHHHHHHHHHHHHH
Q 006659 545 IATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVED--------CLQPVINIVPLQLLAYHLT 616 (636)
Q Consensus 545 l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~~~~p~~~~--------~~~~~~~~v~~q~la~~lA 616 (636)
+...|.+ ..+.+.++.++++|.+++.||+.....+.. .+|..+.+|...+ ..+.+..++.+++|++.++
T Consensus 99 iS~sG~t-~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~--~ad~~l~~~~~~e~~~~~~~~~~s~~~~l~~~d~L~~~l~ 175 (201)
T 3fxa_A 99 ISKGGNT-GELLNLIPACKTKGSTLIGVTENPDSVIAK--EADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLM 175 (201)
T ss_dssp ECSSSCC-HHHHTTHHHHHHHTCEEEEEESCTTSHHHH--HCSEEEECCCSCCCSTTSCSCHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCC-HHHHHHHHHHHHcCCeEEEEECCCCChhHH--hCCEEEEcCCCccccccCCCchHHHHHHHHHHHHHHHHHH
Confidence 8877765 446678889999999999999877654321 2567888875322 2345556678899999999
Q ss_pred HHcCCCCCC
Q 006659 617 VLRGYNVDQ 625 (636)
Q Consensus 617 ~~~G~~pd~ 625 (636)
..+|.++++
T Consensus 176 ~~~g~~~~~ 184 (201)
T 3fxa_A 176 TYMNYTKEQ 184 (201)
T ss_dssp HHTTCCHHH
T ss_pred HhcCCCHHH
Confidence 999999874
No 47
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=98.99 E-value=4e-09 Score=102.78 Aligned_cols=145 Identities=15% Similarity=0.159 Sum_probs=117.7
Q ss_pred hHHHHHHHHHhcC-----CCeEEEEeCCCCHHHHHHHHHHHHHhccccccccccccccccccccccCCCCeEEEEeCCcc
Q 006659 477 DQEMKVLAKQLIA-----EQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDAC 551 (636)
Q Consensus 477 ~~~~~~~a~~l~~-----~~~~~~lG~G~~~~~A~e~alKl~E~~~~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~~~~~ 551 (636)
.+.++++++.+.. .++++++|.|.++.+|.+++.+|... .+++..+...++.|++...+++++++|++...|.+
T Consensus 41 ~~~i~~~~~~i~~~a~~~a~~I~i~G~G~S~~~A~~~~~~l~~l-g~~~~~~~~~~~~~~~~~~~~~~DlvI~iS~SG~t 119 (220)
T 3etn_A 41 TDAYEKAVELIVEQIHRKKGKLVTSGMGKAGQIAMNIATTFCST-GIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKT 119 (220)
T ss_dssp CTHHHHHHHHHHHHTTTTCCCEEEECSHHHHHHHHHHHHHHHHT-TCCEEECCTTGGGBTGGGGCCTTCEEEEECSSSCC
T ss_pred HHHHHHHHHHHHhHhhccCCEEEEEEecHHHHHHHHHHHHHHhc-CCcEEEeCCHHHHHhhhccCCCCCEEEEEcCCCCC
Confidence 4556777777766 89999999999999999999999975 56888888889999999999999999999877765
Q ss_pred hHHHHHHHHHHHh--cCCeEEEEecCCCCcCCCCCCcceEEEcCCCCc--------chhhHHHHHHHHHHHHHHHHHcCC
Q 006659 552 FSKQQSVIQQLHA--RKGRLIVMCSKGDAASIFPGGSCRVIEVPQVED--------CLQPVINIVPLQLLAYHLTVLRGY 621 (636)
Q Consensus 552 ~~~~~~~~~~~~~--~g~~v~vi~~~~~~~~~~~~~~~~~~~~p~~~~--------~~~~~~~~v~~q~la~~lA~~~G~ 621 (636)
..+.+.++.+++ +|++++.||+.....+.. .+|..+.+|...+ ..+.+..++.+++|++.++..+|.
T Consensus 120 -~~~i~~~~~ak~~~~Ga~vI~IT~~~~s~La~--~aD~~l~~~~~~e~~~~~~~~~~S~~~~l~lld~L~~~l~~~~g~ 196 (220)
T 3etn_A 120 -REIVELTQLAHNLNPGLKFIVITGNPDSPLAS--ESDVCLSTGHPAEVCTLGMTPTTSTTVMTVIGDILVVQTMKRTEF 196 (220)
T ss_dssp -HHHHHHHHHHHHHCTTCEEEEEESCTTSHHHH--HSSEEEECCCCCCCSTTSCSSSHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred -HHHHHHHHHHHhcCCCCeEEEEECCCCChhHH--hCCEEEEcCCCcccccccccchHHHHHHHHHHHHHHHHHHHHhCC
Confidence 556788899999 999999999876554321 2567788874322 235566777899999999999999
Q ss_pred CCCC
Q 006659 622 NVDQ 625 (636)
Q Consensus 622 ~pd~ 625 (636)
++++
T Consensus 197 ~~~~ 200 (220)
T 3etn_A 197 TIEE 200 (220)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 9875
No 48
>1zzg_A Glucose-6-phosphate isomerase; structural genomics, riken structural genomics/PR initiative, RSGI, NPPSFA; 1.95A {Thermus thermophilus}
Probab=98.97 E-value=8.5e-09 Score=108.75 Aligned_cols=199 Identities=16% Similarity=0.015 Sum_probs=129.8
Q ss_pred cccchHHHHHHHc-CCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEeeccc--h-hcccCCC-CCCcEEEEEcCCCCC
Q 006659 305 LLGGLKDHLKTIR-RSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIASD--L-VDRQAPI-YREDTAVFVSQSGET 379 (636)
Q Consensus 305 ~~~~l~~~~~~l~-~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~e--~-~~~~~~~-~~~dlvI~iS~SG~t 379 (636)
+.+.++++++. + ..+.|+++|+|+|+..+..+.+.+.. .+.++.+.+..+ + ......+ .+++++|++|.||+|
T Consensus 52 ~~~~i~~i~~~-~~~~~~Vv~iGIGGS~LG~~~~~~aL~~-~~~~~~~~~n~dp~~~~~~l~~l~~~~TlviviSKSGtT 129 (415)
T 1zzg_A 52 TLREVRRYREA-NPWVEDFVLIGIGGSALGPKALEAAFNE-SGVRFHYLDHVEPEPILRLLRTLDPRKTLVNAVSKSGST 129 (415)
T ss_dssp HHHHHHHHHHT-CTTCSEEEEECCGGGTHHHHHHHHHHCC-SCCEEEEECSCCHHHHHHHHHHSCGGGEEEEEEESSSCC
T ss_pred CHHHHHHHHHH-hcCCCEEEEEccCccHHHHHHHHHHHhc-CCCceEEecCCCHHHHHHHHhhCCCCCEEEEEEeCCCCC
Confidence 35677777777 5 68999999999999999988888765 456666654222 2 2222235 456799999999999
Q ss_pred HHHHHHHHHHHHc-----C----CeEEEEEcCCCCccccccCee----EEcCCCCcccccchhhHHHHHHHHHHHHHHHh
Q 006659 380 ADTLQALEYASEN-----G----ALCVGITNTVGSAIARKTHCG----VHINAGAEIGVASTKAYTSQIVVMAMLALAIG 446 (636)
Q Consensus 380 ~e~i~al~~ak~~-----g----~~vi~IT~~~~s~La~~ad~~----l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~ 446 (636)
.||+.+++.+|+. | .++|+||++.+|+|.+.|+.. +.++.. +....|..+.+.++ ++..++
T Consensus 130 ~ET~~~~~~ar~~l~~~~G~~~~~~~vavT~~~~s~L~~~a~~~Gi~~f~~~d~----VGGRySv~SavGL~--~~~~~G 203 (415)
T 1zzg_A 130 AETLAGLAVFLKWLKAHLGEDWRRHLVVTTDPKEGPLRAFAEREGLKAFAIPKE----VGGRFSALSPVGLL--PLAFAG 203 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGGGGGEEEEECSSSSHHHHHHHHHTCEEEECCTT----CCGGGCTTSHHHHH--HHHHTT
T ss_pred HHHHHHHHHHHHHHHHhcCccccCeEEEEeCCCCChHHHHHHHhCCcEEEeccC----CCcccHHHHHHHHH--HHHHcC
Confidence 9999999999987 7 899999999999999998743 344321 11222222222221 111121
Q ss_pred cCCCCcHHHHHHHHHHHhhhHHHHHHHHhchHHHHHHHHH---hcCCCeEEEEeCC-CCHHHHHHHHHHHHHhcccc
Q 006659 447 GDTISTQARREAIIDGLCDLPNKVREVLKLDQEMKVLAKQ---LIAEQSLLVFGRG-YNYATALEGALKVKEVALMH 519 (636)
Q Consensus 447 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~a~~---l~~~~~~~~lG~G-~~~~~A~e~alKl~E~~~~~ 519 (636)
.+ .+++++..+.+.+.+...++ ++..-.+|-. ..+.+...++... .....+....+-++|..+..
T Consensus 204 ----~d---~~~lL~GA~~md~~~~~~~~-~N~~~~~al~~~~~~g~~~~~i~pY~~~l~~f~~~~qQL~~ES~GK~ 272 (415)
T 1zzg_A 204 ----AD---LDALLMGARKANETALAPLE-ESLPLKTALLLHLHRHLPVHVFMVYSERLSHLPSWFVQLHDESLGKV 272 (415)
T ss_dssp ----CC---HHHHHHHHHHHHHHHHSCGG-GCHHHHHHHHHHHTTTSSEEEEEECCSTTTTHHHHHHHHHHHHHSEE
T ss_pred ----CC---HHHHHHHHHHHHHHHhcchh-hCHHHHHHHHHHHhCCCCeEEEEECcHHHHHHHHHHHHHHHhhhcCc
Confidence 11 25666677777766665522 2333333322 2566565666554 55677888888999977654
No 49
>2q8n_A Glucose-6-phosphate isomerase; TM1385, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: 2PE; 1.82A {Thermotoga maritima MSB8}
Probab=98.94 E-value=3.6e-09 Score=112.96 Aligned_cols=200 Identities=15% Similarity=0.046 Sum_probs=127.7
Q ss_pred ccchHHHHHHHcCCCeEEEEeechhHHHHHHHHHHHHHhc-----------CCcEEEeeccc--h-hcccCCCC-CCcEE
Q 006659 306 LGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELS-----------DLPVTMEIASD--L-VDRQAPIY-REDTA 370 (636)
Q Consensus 306 ~~~l~~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~-----------~~~~~~~~~~e--~-~~~~~~~~-~~dlv 370 (636)
.+.++++++.++.+++|+++|+|+|+..+..+.+.+.... ++.+.+.+..+ + ......++ +++++
T Consensus 65 ~~~i~~~a~~i~~~~~Vv~IGIGGS~LG~~~~~~aL~~~~~~~~~~~~~~~~~~v~~~~nvdp~~~~~~l~~L~~~~Tlv 144 (460)
T 2q8n_A 65 IDSVKSLEDWIINFDTVVVLGIGGSGLGNLALHYSLRPLNWNEMTREERNGYARVFVVDNVDPDLMSSVLDRIDPKTTLF 144 (460)
T ss_dssp HHHHHTTHHHHTTCSEEEEECCGGGTHHHHHHHHHHSCTTGGGSCTTTTTTCCEEEEECSCCHHHHHHHHTTCCGGGEEE
T ss_pred HHHHHHHHHHhcCCCEEEEEecCchHHHHHHHHHHHHhhhhcccccccccCCcceEEecCCCHHHHHHHHhcCCCCCEEE
Confidence 5677888888889999999999999999999988886542 45555554222 2 22233454 45699
Q ss_pred EEEcCCCCCHHHHHHHHHHHHc-----C---CeEEEEEcCCCCccccccCe----eEEcCCCCcccccchhhHHHHHHHH
Q 006659 371 VFVSQSGETADTLQALEYASEN-----G---ALCVGITNTVGSAIARKTHC----GVHINAGAEIGVASTKAYTSQIVVM 438 (636)
Q Consensus 371 I~iS~SG~t~e~i~al~~ak~~-----g---~~vi~IT~~~~s~La~~ad~----~l~~~~~~e~~~~~t~s~~~~~~~l 438 (636)
|++|.||+|.||+.+++.+|+. | .++|+||++.+|+|.+.||. ++.++.. +....|..+.+.++
T Consensus 145 IviSKSGtT~ET~~~~~~ar~~l~~~~G~~~~~~VAvT~~~~s~L~~~A~~~Gi~~f~~~d~----VGGRySvlSavGL~ 220 (460)
T 2q8n_A 145 NVISKSGSTAEVMATYSIARGILEAYGLDPREHMLITTDPEKGFLRKLVKEEGFRSLEVPPG----VGGRFSVLTPVGLL 220 (460)
T ss_dssp EEECSSSCCHHHHHHHHHHHHHHHHTTCCGGGTEEEEECSSSSHHHHHHHHHTCEEEECCTT----CCGGGCTTSHHHHH
T ss_pred EEEcCCCCCHHHHHHHHHHHHHHHHhcCCccCeEEEEeCCCCChHHHHHHHhCCceEeeccc----cCcchHHHHHHHHH
Confidence 9999999999999999999987 7 89999999999999999985 2344321 11222222222221
Q ss_pred HHHHHHHhcCCCCcHHHHHHHHHHHhhhHHHHHHH-HhchHHHHHHH--H---HhcCCCeEEEEeCC-CCHHHHHHHHHH
Q 006659 439 AMLALAIGGDTISTQARREAIIDGLCDLPNKVREV-LKLDQEMKVLA--K---QLIAEQSLLVFGRG-YNYATALEGALK 511 (636)
Q Consensus 439 ~lL~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~-~~~~~~~~~~a--~---~l~~~~~~~~lG~G-~~~~~A~e~alK 511 (636)
.+ ..+ +.+ .+++++..+.+.+.+... ++ ++..-.+| . ...+.+...++... .....+....+-
T Consensus 221 ~~--~~~----G~d---i~~lL~GA~~md~~~~~~~~~-~N~~~~~a~~~~~~~~~g~~~~~i~pY~~~L~~f~~w~qQL 290 (460)
T 2q8n_A 221 SA--MAE----GID---IDELHEGAKDAFEKSMKENIL-ENPAAMIALTHYLYLNKGKSISVMMAYSNRMIYLVDWYRQL 290 (460)
T ss_dssp HH--HHT----TCC---HHHHHHHHHHHHHHTTCSCGG-GCHHHHHHHHHHHHHHTTCCEEEEEESSGGGHHHHHHHHHH
T ss_pred HH--HHc----CCC---HHHHHHHHHHHHHHhccCChh-hCHHHHHHHHHHHHHhCCCCeeEEecchHHHHHHHHHHhhh
Confidence 11 111 111 245555555554444332 11 12112222 1 13566666666554 557778888899
Q ss_pred HHHhcccc
Q 006659 512 VKEVALMH 519 (636)
Q Consensus 512 l~E~~~~~ 519 (636)
++|..+..
T Consensus 291 ~~ES~GK~ 298 (460)
T 2q8n_A 291 WAESLGKR 298 (460)
T ss_dssp HHHHHCCS
T ss_pred hhhhcCCc
Confidence 99977544
No 50
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=98.86 E-value=1.6e-08 Score=93.17 Aligned_cols=96 Identities=10% Similarity=0.015 Sum_probs=67.8
Q ss_pred HHHHHHcCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEeeccchhcccCCCCCCcEEEEEcCCCCCHHHHHHHHHHH
Q 006659 311 DHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIASDLVDRQAPIYREDTAVFVSQSGETADTLQALEYAS 390 (636)
Q Consensus 311 ~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG~t~e~i~al~~ak 390 (636)
.+++.+.+-+.||++|+|.|...+..+-+-.. +.+-..... ....+++.|++|++|.||+++..+++++.+|
T Consensus 30 llaqai~~~g~IyvfG~Ghs~~~~~e~~~~~e---~l~~~~~~~-----~~~~i~~~D~vii~S~Sg~n~~~ie~A~~ak 101 (170)
T 3jx9_A 30 LLAQALVGQGKVYLDAYGEFEGLYPMLSDGPD---QMKRVTKIK-----DHKTLHAVDRVLIFTPDTERSDLLASLARYD 101 (170)
T ss_dssp HHHHHHHTTCCEEEEECGGGGGGTHHHHTSTT---CCTTEEECC-----TTCCCCTTCEEEEEESCSCCHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEECCCcHHHHHHHHHcccC---Cccchhhhh-----hcCCCCCCCEEEEEeCCCCCHHHHHHHHHHH
Confidence 33445566699999999999876655433222 222211111 1226789999999999999999999999999
Q ss_pred HcCCeEEEEEc-CCCCcc-ccccCee
Q 006659 391 ENGALCVGITN-TVGSAI-ARKTHCG 414 (636)
Q Consensus 391 ~~g~~vi~IT~-~~~s~L-a~~ad~~ 414 (636)
++|+++|+||+ ...... .+++|++
T Consensus 102 e~G~~vIaITs~~~~~~~~~~L~d~a 127 (170)
T 3jx9_A 102 AWHTPYSIITLGDVTETLERSIAPLA 127 (170)
T ss_dssp HHTCCEEEEESSCCCTTGGGSSSCEE
T ss_pred HCCCcEEEEeCcchhccccCcHHHHH
Confidence 99999999999 333221 3566655
No 51
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=98.83 E-value=5.2e-08 Score=92.16 Aligned_cols=151 Identities=11% Similarity=0.156 Sum_probs=111.7
Q ss_pred HHHHHHHhc--hHHHHHHHHHhcCCCeEEEEeCCCCHHHHHHHHHHHHHhccccccccccccccccccccccCCCCeEEE
Q 006659 468 NKVREVLKL--DQEMKVLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVI 545 (636)
Q Consensus 468 ~~~~~~~~~--~~~~~~~a~~l~~~~~~~~lG~G~~~~~A~e~alKl~E~~~~~a~~~~~~Ef~HGp~~~~~~~~~vi~l 545 (636)
+.+++..+. .+.++++++.+.+.++++++|.|.++.+|.+++.+|.+.. +++..+. ++ | ...+++++.+|++
T Consensus 13 ~~l~~t~~~l~~~~i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g-~~~~~~~--~~-~--~~~~~~~d~vI~i 86 (186)
T 1m3s_A 13 NELHNSAAYISNEEADQLADHILSSHQIFTAGAGRSGLMAKSFAMRLMHMG-FNAHIVG--EI-L--TPPLAEGDLVIIG 86 (186)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHCSCEEEECSHHHHHHHHHHHHHHHHTT-CCEEETT--ST-T--CCCCCTTCEEEEE
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHcCCeEEEEecCHHHHHHHHHHHHHHhcC-CeEEEeC--cc-c--ccCCCCCCEEEEE
Confidence 334444442 4567888888888999999999999999999999998864 4666553 32 3 3457888888888
Q ss_pred EeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcceEEEcCCCCcc--------hhhH------HHHHHHHHH
Q 006659 546 ATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVEDC--------LQPV------INIVPLQLL 611 (636)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~~~~p~~~~~--------~~~~------~~~v~~q~l 611 (636)
...|.+ ..+.+.++.++++|++++.||+.....+. ..+|..+.+|...+. ..|+ ..++++++|
T Consensus 87 S~sG~t-~~~~~~~~~ak~~g~~vi~IT~~~~s~l~--~~ad~~l~~~~~~~~~~~~~~~s~~~~~s~~~~~~~~~~d~L 163 (186)
T 1m3s_A 87 SGSGET-KSLIHTAAKAKSLHGIVAALTINPESSIG--KQADLIIRMPGSPKDQSNGSYKTIQPMGSLFEQTLLLFYDAV 163 (186)
T ss_dssp CSSSCC-HHHHHHHHHHHHTTCEEEEEESCTTSHHH--HHCSEEEECSCCSCC-----CCCCSSTTHHHHHHHHHHHHHH
T ss_pred cCCCCc-HHHHHHHHHHHHCCCEEEEEECCCCCchH--HhCCEEEEeCCccccCCCCcccccccCccHHHHHHHHHHHHH
Confidence 877766 55677889999999999999997654332 124677888854332 1232 346778999
Q ss_pred HHHHHHHcCCCCCCCC
Q 006659 612 AYHLTVLRGYNVDQPR 627 (636)
Q Consensus 612 a~~lA~~~G~~pd~pr 627 (636)
.+.++..+|.+++..+
T Consensus 164 ~~~~~~~~~~~~~~~~ 179 (186)
T 1m3s_A 164 ILKLMEKKGLDSETMF 179 (186)
T ss_dssp HHHHHHHTTCCTTTCC
T ss_pred HHHHHHHcCCCHHHHH
Confidence 9999999999998764
No 52
>2wu8_A Glucose-6-phosphate isomerase; gluconeogenesis, 5-phosphoarabinonate (PAB), PGI, cytoplasm, glycolysis; 2.25A {Mycobacterium tuberculosis}
Probab=98.58 E-value=2.7e-07 Score=100.03 Aligned_cols=189 Identities=15% Similarity=0.063 Sum_probs=120.8
Q ss_pred CCCeEEEEeechhHHHHHHHHHHHHHhc--CCcEEEee---ccchhcccCCC-CCCcEEEEEcCCCCCHHHHHHHHHHHH
Q 006659 318 RSRRIVFIGCGTSYNAALAARPILEELS--DLPVTMEI---ASDLVDRQAPI-YREDTAVFVSQSGETADTLQALEYASE 391 (636)
Q Consensus 318 ~~~~I~i~G~G~S~~aa~~~~~~~~~~~--~~~~~~~~---~~e~~~~~~~~-~~~dlvI~iS~SG~t~e~i~al~~ak~ 391 (636)
..+.|+++|+|+|+.....+...+.... ++++.+.+ +.++......+ .+++++|++|.||+|.||+.+++.+|+
T Consensus 142 ~i~~VV~IGIGGS~LGp~~v~~aL~~~~~~~~~v~fvsNvDp~~~~~~l~~l~~e~TLvIViSKSGtT~ETl~na~~ar~ 221 (549)
T 2wu8_A 142 RISTVVNIGIGGSDLGPVMVYQALRHYADAGISARFVSNVDPADLIATLADLDPATTLFIVASKTFSTLETLTNATAARR 221 (549)
T ss_dssp BCCEEEEECCGGGTHHHHHHHHHTGGGCCSSCEEEEECCSSHHHHHHHHTTCCGGGEEEEEECSSSCCHHHHHHHHHHHH
T ss_pred ccceEEEEeccchHHHHHHHHHHHHhhccCCCeEEEEccCCHHHHHHHHhcCCCCcEEEEEEeCCCCCHhHHHHHHHHHH
Confidence 4789999999999999999988887763 46666665 34443333344 468899999999999999999999998
Q ss_pred c-----C-----CeEEEEEcCCCCcccccc-C--eeEEcCCCCcccccchhhHHHHHHHHHHHHHHHhcCCCCcHHHHHH
Q 006659 392 N-----G-----ALCVGITNTVGSAIARKT-H--CGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISTQARREA 458 (636)
Q Consensus 392 ~-----g-----~~vi~IT~~~~s~La~~a-d--~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~~~~~~~~ 458 (636)
. | ..+|+||++. +++.+.+ | .++.++...- ...|..+.+.+. +++.++ .+.+++
T Consensus 222 ~l~~~~G~~~~~~h~VAvT~~~-s~~~~~gid~~~~F~~~d~VG----GRySv~SaVGL~--~al~~G------~d~~~~ 288 (549)
T 2wu8_A 222 WLTDALGDAAVSRHFVAVSTNK-RLVDDFGINTDNMFGFWDWVG----GRYSVDSAIGLS--LMTVIG------RDAFAD 288 (549)
T ss_dssp HHHHHHCGGGGGGTEEEECSCH-HHHHHHTCCGGGEECCCTTSC----GGGCTTTGGGHH--HHHHHC------HHHHHH
T ss_pred HHHHhcCcchhcCEEEEECCCc-HHHHhcCcccccEEEeeecCC----cchHHHHHHHHH--HHHhcC------hhHHHH
Confidence 7 7 6899999874 6887776 5 6676653211 112222222211 111111 134566
Q ss_pred HHHHHhhhHHHHHHH-Hhch-HHHHH----HHHHhcCCCeEEEEeCC-CCHHHHHHHHHHHHHhcccc
Q 006659 459 IIDGLCDLPNKVREV-LKLD-QEMKV----LAKQLIAEQSLLVFGRG-YNYATALEGALKVKEVALMH 519 (636)
Q Consensus 459 ~~~~l~~l~~~~~~~-~~~~-~~~~~----~a~~l~~~~~~~~lG~G-~~~~~A~e~alKl~E~~~~~ 519 (636)
+++..+.+.+.+... ++.+ +..-. +...+.+.+...++... .....+....+-.+|..+..
T Consensus 289 lL~GA~~md~~f~~~~~~~N~p~~lal~~~~~~~~~g~~~~~~lpY~~~L~~f~~w~qQL~mES~GK~ 356 (549)
T 2wu8_A 289 FLAGFHIIDRHFATAPLESNAPVLLGLIGLWYSNFFGAQSRTVLPYSNDLSRFPAYLQQLTMESNGKS 356 (549)
T ss_dssp HHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHHSCCCEEEEEESCGGGTTHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHhhcCChhhCHHHHHHHHHHHHHhCCCCCeEEEEeChHHHHHHHHHHHHHHHHhcCCc
Confidence 777777666666543 1211 11112 22234466766666555 34566677788899999764
No 53
>2cxn_A Glucose-6-phosphate isomerase; 1.40A {Mus musculus} PDB: 2cvp_A 2cxo_A* 2cxp_A* 2cxq_A* 2cxr_A* 2cxs_A* 2cxt_A* 2cxu_A 1u0e_A 1u0f_A* 1u0g_A* 1jiq_A 1iri_A 1nuh_A* 1jlh_A 1iat_A 1hm5_A 1g98_A 1hox_A* 1xtb_A* ...
Probab=98.56 E-value=1.1e-06 Score=95.28 Aligned_cols=188 Identities=15% Similarity=0.045 Sum_probs=118.5
Q ss_pred CCeEEEEeechhHHHHHHHHHHHHHhc--CCcEEEeecc--ch-hcccCCC-CCCcEEEEEcCCCCCHHHHHHHHHHHH-
Q 006659 319 SRRIVFIGCGTSYNAALAARPILEELS--DLPVTMEIAS--DL-VDRQAPI-YREDTAVFVSQSGETADTLQALEYASE- 391 (636)
Q Consensus 319 ~~~I~i~G~G~S~~aa~~~~~~~~~~~--~~~~~~~~~~--e~-~~~~~~~-~~~dlvI~iS~SG~t~e~i~al~~ak~- 391 (636)
.+.|+++|+|+|+.....+...+.... +.++.+.+.. ++ ......+ .+++++|++|.||+|.||+.+++.+|+
T Consensus 149 i~~VV~IGIGGS~LGp~~v~~aL~~~~~~~~~v~fvsNvDp~~i~~~l~~L~~e~TLvIViSKSGtT~ETl~na~~ar~~ 228 (557)
T 2cxn_A 149 ITDIINIGIGGSDLGPLMVTEALKPYSKGGPRVWFVSNIDGTHIAKTLASLSPETSLFIIASKTFTTQETITNAETAKEW 228 (557)
T ss_dssp CCEEEEECCGGGTHHHHHHHHHTGGGGTTSCEEEEECCSSHHHHHHHHTTCCTTTEEEEEECSSSCCHHHHHHHHHHHHH
T ss_pred cceEEEEeccchHHHHHHHHHHHhhhccCCCeEEEEecCCHHHHHHHHhcCCCCcEEEEEEcCCCCChhHHHHHHHHHHH
Confidence 689999999999999999988887663 4566665331 22 2223345 578899999999999999999999987
Q ss_pred ---c-C------CeEEEEEcCCCCcccccc-C--eeEEcCCCCcccccchhhHHHHHHHHHHHHHHHhcCCCCcHHHHHH
Q 006659 392 ---N-G------ALCVGITNTVGSAIARKT-H--CGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISTQARREA 458 (636)
Q Consensus 392 ---~-g------~~vi~IT~~~~s~La~~a-d--~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~~~~~~~~ 458 (636)
+ | ..+|+||.+. +++++.. + .++.++...- ...|..+.+.+.. ++.++ .+.+++
T Consensus 229 l~~~~G~~~~~~~h~VavTt~~-s~~~~~gi~~~~~F~~~d~VG----GRySv~SaVGL~~--a~~~G------~d~~~~ 295 (557)
T 2cxn_A 229 FLEAAKDPSAVAKHFVALSTNT-AKVKEFGIDPQNMFEFWDWVG----GRYSLWSAIGLSI--ALHVG------FDHFEQ 295 (557)
T ss_dssp HHHHHCCGGGGGGTEEEEESCH-HHHHHHTCCGGGEEECCTTSC----GGGCTTTGGGHHH--HHHHC------HHHHHH
T ss_pred HHHhcCccchhcCEEEEEeCCc-HHHHHcCCCcccEEEeecCCC----cccHHHHHHHHHH--HHHcC------hHHHHH
Confidence 4 5 5799999874 7777765 4 4666653211 1122222222111 11111 244677
Q ss_pred HHHHHhhhHHHHHHH-HhchH-H----HHHHHHHhcCCCeEEEEeCC-CCHHHHHHHHHHHHHhcccc
Q 006659 459 IIDGLCDLPNKVREV-LKLDQ-E----MKVLAKQLIAEQSLLVFGRG-YNYATALEGALKVKEVALMH 519 (636)
Q Consensus 459 ~~~~l~~l~~~~~~~-~~~~~-~----~~~~a~~l~~~~~~~~lG~G-~~~~~A~e~alKl~E~~~~~ 519 (636)
+++..+.+.+.+... ++.+. . +.-+...+.+.+...++-.. .....+....+-.+|..+..
T Consensus 296 lL~GA~~md~~f~~~~l~~N~p~llal~~~~~~~~~g~~~~~~lpY~~~L~~f~~w~qQL~mES~GK~ 363 (557)
T 2cxn_A 296 LLSGAHWMDQHFLKTPLEKNAPVLLALLGIWYINCYGCETHALLPYDQYMHRFAAYFQQGDMESNGKY 363 (557)
T ss_dssp HHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHTSCCCEEEEEESCGGGTTHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhccCChhhCHHHHHHHHHHHHHhcCCCCeEEEEEchHHHHHHHHHHHHHHHHhcCCc
Confidence 777777777666553 22211 1 11122234466655555555 44566777788899999774
No 54
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=98.54 E-value=8.2e-07 Score=83.33 Aligned_cols=139 Identities=11% Similarity=0.127 Sum_probs=104.4
Q ss_pred hHHHHHHHHHhcCCCeEEEEeCCCCHHHHHHHHHHHHHhccccccccccccccccccccccCCCCeEEEEeCCcchHHHH
Q 006659 477 DQEMKVLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQ 556 (636)
Q Consensus 477 ~~~~~~~a~~l~~~~~~~~lG~G~~~~~A~e~alKl~E~~~~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~~~~~~~~~~ 556 (636)
.+.++++++.+...++++++|.|.++.+|.+++.+|... +.++..+. ++ | ...+++++.+|++...|.+ ..+.
T Consensus 27 ~~~i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~-g~~~~~~~--~~-~--~~~~~~~d~vi~iS~sG~t-~~~~ 99 (180)
T 1jeo_A 27 KNKLDSLIDRIIKAKKIFIFGVGRSGYIGRCFAMRLMHL-GFKSYFVG--ET-T--TPSYEKDDLLILISGSGRT-ESVL 99 (180)
T ss_dssp HHHHHHHHHHHHHCSSEEEECCHHHHHHHHHHHHHHHHT-TCCEEETT--ST-T--CCCCCTTCEEEEEESSSCC-HHHH
T ss_pred HHHHHHHHHHHHhCCEEEEEeecHHHHHHHHHHHHHHHc-CCeEEEeC--CC-c--cccCCCCCEEEEEeCCCCc-HHHH
Confidence 355777888888889999999999999999999999874 45666553 22 2 3456788888888877766 4567
Q ss_pred HHHHHHHhcCCeEEEEecCCCCcCCCCCCcceEEEcCCCCcchhhH------HHHHHHHHHHHHHHHHcCCCCCC
Q 006659 557 SVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVEDCLQPV------INIVPLQLLAYHLTVLRGYNVDQ 625 (636)
Q Consensus 557 ~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~------~~~v~~q~la~~lA~~~G~~pd~ 625 (636)
+.++.++++|.+++.||+.... +.. .+|..+.+|...+.+.++ ..++.++++.+.++..+|.+++.
T Consensus 100 ~~~~~ak~~g~~vi~IT~~~~s-l~~--~ad~~l~~~~~~~~~~~~~s~~~~~~~~~ld~L~~~~~~~~~~~~~~ 171 (180)
T 1jeo_A 100 TVAKKAKNINNNIIAIVCECGN-VVE--FADLTIPLEVKKSKYLPMGTTFEETALIFLDLVIAEIMKRLNLDESE 171 (180)
T ss_dssp HHHHHHHTTCSCEEEEESSCCG-GGG--GCSEEEECCCCCBTTBCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHCCCcEEEEeCCCCh-HHH--hCCEEEEeCCcccccccchhHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 7889999999999999997665 432 356788888532222332 24567899999999999988764
No 55
>3tbf_A Glucosamine--fructose-6-phosphate aminotransferas [isomerizing]; structural genomics; 2.28A {Francisella tularensis subsp}
Probab=98.44 E-value=3.1e-06 Score=88.87 Aligned_cols=140 Identities=14% Similarity=0.149 Sum_probs=107.2
Q ss_pred cchHHHHHHHcCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEeeccchhcccC-CCCCCcEEEEEcCCCCC-HHHHH
Q 006659 307 GGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIASDLVDRQA-PIYREDTAVFVSQSGET-ADTLQ 384 (636)
Q Consensus 307 ~~l~~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~dlvI~iS~SG~t-~e~i~ 384 (636)
+.++++++.+.+.++++++|.|..+..|..++..+..+..+++..+.+.||.|.+. .++++..||++...+.. ..++.
T Consensus 215 ~~~~~~a~~~~~~~~~~~lGrG~~~~~A~E~ALKlkE~s~i~ae~~~a~E~~HGP~alid~~~pvi~~~~~d~~~~k~~~ 294 (372)
T 3tbf_A 215 TEIDQISEYFSDKEHTIFLGRGLYYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNMPIVAVVPNDELLDKTLS 294 (372)
T ss_dssp HHHHHHHGGGTTCCEEEEEECTTHHHHHHHHHHHHHHHHCCEEEEEEGGGTTTTTTTTCCTTCEEEEEECSSTTHHHHHH
T ss_pred HHHHHHHHHHhccCCEEEEecCcCHHHHHHHHHHHHHHhCcCcceeeHHHhcCccHhhcCCCCeEEEEecCCchHHHHHH
Confidence 34677888888999999999999999999999999999999999999999988764 46788888888766654 45678
Q ss_pred HHHHHHHcCCeEEEEEcCCCCcc-ccccCeeEEcCCCCcccccchhhHHHHHHHHHHHHHHHhcCCCC
Q 006659 385 ALEYASENGALCVGITNTVGSAI-ARKTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTIS 451 (636)
Q Consensus 385 al~~ak~~g~~vi~IT~~~~s~L-a~~ad~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~ 451 (636)
.++..+.+|+++++|++.....+ ...+|.++.++..++. -+....+..+.+|+..++..++.
T Consensus 295 ~~~e~~~rg~~vi~i~~~~~~~~~~~~~~~~i~~p~~~~~-----l~pl~~~i~~Qlla~~~A~~rG~ 357 (372)
T 3tbf_A 295 NLQEVHARGGKLILFVDKAVKERVNFDNSIVLELDAGHDF-----SAPVVFTIPLQLLSYHVAIIKGT 357 (372)
T ss_dssp HHHHHHHTTCEEEEEEEGGGGGGCCCTTCEEEEECCCSTT-----HHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCeEEEEECCCcccccccccceEEECCCCchh-----HhHHHHHHHHHHHHHHHHHHcCc
Confidence 89999999999999998643133 3567778877643222 23333455667777777765554
No 56
>2o2c_A GPI, glucose-6-phosphate isomerase, glycosomal, PGI, phosphohexose; dimer; HET: G6Q; 1.58A {Trypanosoma brucei brucei} PDB: 2o2d_A* 1q50_A
Probab=98.42 E-value=9.9e-07 Score=96.37 Aligned_cols=188 Identities=13% Similarity=0.086 Sum_probs=117.1
Q ss_pred CCeEEEEeechhHHHHHHHHHHHHHhc--CCcEEEee---ccchhcccCCC-CCCcEEEEEcCCCCCHHHHHHHHHHHHc
Q 006659 319 SRRIVFIGCGTSYNAALAARPILEELS--DLPVTMEI---ASDLVDRQAPI-YREDTAVFVSQSGETADTLQALEYASEN 392 (636)
Q Consensus 319 ~~~I~i~G~G~S~~aa~~~~~~~~~~~--~~~~~~~~---~~e~~~~~~~~-~~~dlvI~iS~SG~t~e~i~al~~ak~~ 392 (636)
.+.|+++|+|+|+.....+...+.... ++++.+.+ +.++......+ .+++++|++|.||+|.||+.+++.||+.
T Consensus 197 i~~VV~IGIGGS~LGp~~v~eaL~~~~~~~~~v~fvsNvDp~~i~~~l~~l~~e~TLfIViSKSGTT~ETl~na~~ar~~ 276 (613)
T 2o2c_A 197 IRHVVNIGIGGSDLGPVMATEALKPFSQRDLSLHFVSNVDGTHIAEVLKSIDIEATLFIVASKTFTTQETITNALSARRA 276 (613)
T ss_dssp CCEEEEECCGGGTHHHHHHHHHTGGGSCTTSEEEEECCSSHHHHHHHHHHCCGGGEEEEEECSSSCCHHHHHHHHHHHHH
T ss_pred eeeEEEEeccchHHHHHHHHHHhhhhccCCceEEEEccCCHHHHHHHHhcCCCCCEEEEEEeCCCCChhHHHHHHHHHHH
Confidence 689999999999999999988887763 45666655 33333222223 4688999999999999999999988876
Q ss_pred -----C-----------CeEEEEEcCCCCcccccc-C--eeEEcCCCCcccccchhhHHHHHHHHHHHHHHHhcCCCCcH
Q 006659 393 -----G-----------ALCVGITNTVGSAIARKT-H--CGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISTQ 453 (636)
Q Consensus 393 -----g-----------~~vi~IT~~~~s~La~~a-d--~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~~~ 453 (636)
| ..+|+||.+. +++++.. | .++.++...- ...|..+.+.++ +++.++ .
T Consensus 277 l~~~~G~~g~~~~~~~a~h~VAVTt~~-s~~~~~gi~~~~~F~~~d~VG----GRySvlSaVGL~--~a~~~G------~ 343 (613)
T 2o2c_A 277 LLDYLRSRGIDEKGSVAKHFVALSTNN-QKVKEFGIDEENMFQFWDWVG----GRYSMWSAIGLP--IMISIG------Y 343 (613)
T ss_dssp HHHHHHHTTCCCTTCHHHHEEEEESCH-HHHHHHTCCGGGEEECCTTSC----GGGCTTSGGGHH--HHHHHC------H
T ss_pred HHHhcCCcccccchhhcCEEEEEeCCc-HHHHHcCCCccceEeeecCCC----cchHHHHHHHHH--HHHHcC------h
Confidence 5 4799999874 7777665 4 3666653211 112222222211 111121 2
Q ss_pred HHHHHHHHHHhhhHHHHHHH-HhchH-HHHHHH----HHhcCCCeEEEEeCC-CCHHHHHHHHHHHHHhcccc
Q 006659 454 ARREAIIDGLCDLPNKVREV-LKLDQ-EMKVLA----KQLIAEQSLLVFGRG-YNYATALEGALKVKEVALMH 519 (636)
Q Consensus 454 ~~~~~~~~~l~~l~~~~~~~-~~~~~-~~~~~a----~~l~~~~~~~~lG~G-~~~~~A~e~alKl~E~~~~~ 519 (636)
+.++++++....+.+.+... ++.+. ..-.+. ..+.+.+...++-.. .....+....+-.+|..+..
T Consensus 344 d~~~elL~GA~~md~~f~~a~l~~N~p~llall~iw~~~~~G~~~~~llpY~~~L~~f~~w~qQL~mES~GK~ 416 (613)
T 2o2c_A 344 ENFVELLTGAHVIDEHFANAPPEQNVPLLLALVGVWYINFFGAVTHAILPYDQYLWRLPAYLQQLDMESNGKY 416 (613)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHTSCCCEEEEEEECGGGTTHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHHHHHhccCChhhCHHHHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHHHHHHhcCCc
Confidence 44667777777776666553 22211 111122 233466654444444 44567777888899999764
No 57
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=98.42 E-value=1.7e-06 Score=81.59 Aligned_cols=140 Identities=11% Similarity=0.073 Sum_probs=103.5
Q ss_pred hHHHHHHHHHhcCCCeEEEEeCCCCHHHHHHHHHHHHHhccccccccc-cccccccccccccCCCCeEEEEeCCcchHHH
Q 006659 477 DQEMKVLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGIL-AGEMKHGPLALVDENLPILVIATRDACFSKQ 555 (636)
Q Consensus 477 ~~~~~~~a~~l~~~~~~~~lG~G~~~~~A~e~alKl~E~~~~~a~~~~-~~Ef~HGp~~~~~~~~~vi~l~~~~~~~~~~ 555 (636)
.+.++++++.+...++++++|.|.++.+|.+++.++.. .+.++.... ..+..|.....+++++.+|++...|.+ ..+
T Consensus 26 ~~~l~~~~~~i~~a~~I~i~G~G~S~~~a~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~iS~sG~t-~~~ 103 (187)
T 3sho_A 26 PEAIEAAVEAICRADHVIVVGMGFSAAVAVFLGHGLNS-LGIRTTVLTEGGSTLTITLANLRPTDLMIGVSVWRYL-RDT 103 (187)
T ss_dssp HHHHHHHHHHHHHCSEEEEECCGGGHHHHHHHHHHHHH-TTCCEEEECCCTHHHHHHHHTCCTTEEEEEECCSSCC-HHH
T ss_pred HHHHHHHHHHHHhCCEEEEEecCchHHHHHHHHHHHHh-cCCCEEEecCCchhHHHHHhcCCCCCEEEEEeCCCCC-HHH
Confidence 46678888888889999999999999999999999976 566777766 334444555667888888888776655 456
Q ss_pred HHHHHHHHhcCCeEEEEecCCCCcCCCCCCcceEEEcCCCCc-ch-hhHHHHHHHHHHHHHHHHHcC
Q 006659 556 QSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVED-CL-QPVINIVPLQLLAYHLTVLRG 620 (636)
Q Consensus 556 ~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~~~~p~~~~-~~-~~~~~~v~~q~la~~lA~~~G 620 (636)
.+.++.++++|.+++.||+.....+.. .+|..+.+|...+ .+ +.+..+..+++|...++...|
T Consensus 104 ~~~~~~ak~~g~~vi~IT~~~~s~l~~--~ad~~l~~~~~~~~~~~S~~~~~~l~d~L~~~~~~~~~ 168 (187)
T 3sho_A 104 VAALAGAAERGVPTMALTDSSVSPPAR--IADHVLVAATRGVGHSLSPVGLIAVVNLLLAEIAVREP 168 (187)
T ss_dssp HHHHHHHHHTTCCEEEEESCTTSHHHH--HCSEEEECCCCCSSSSCCCHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHCCCCEEEEeCCCCCcchh--hCcEEEEecCCCCcccccHhHHHHHHHHHHHHHHHhCc
Confidence 778899999999999999876553321 2567888885322 33 334455567888888876654
No 58
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=98.40 E-value=2e-06 Score=80.86 Aligned_cols=150 Identities=17% Similarity=0.167 Sum_probs=109.0
Q ss_pred HHHHHHHHhc-hHHHHHHHHHhcCCC-eEEEEeCCCCHHHHHHHHHHHHHhccccccccccccccccccccccCCCCeEE
Q 006659 467 PNKVREVLKL-DQEMKVLAKQLIAEQ-SLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILV 544 (636)
Q Consensus 467 ~~~~~~~~~~-~~~~~~~a~~l~~~~-~~~~lG~G~~~~~A~e~alKl~E~~~~~a~~~~~~Ef~HGp~~~~~~~~~vi~ 544 (636)
.+.++++.+. ++.++++++.+...+ +++++|.|.++.+|.+++.++... ..++......++.|.....+++++.+|+
T Consensus 24 ~~~l~~t~~~~~~~i~~~~~~i~~a~~~I~i~G~G~S~~~a~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~d~vI~ 102 (183)
T 2xhz_A 24 RECLAELDQYINQNFTLACEKMFWCKGKVVVMGMGASGHIGRKMAATFAST-GTPSFFVHPGEAAHGDLGMVTPQDVVIA 102 (183)
T ss_dssp HHHHTTGGGTSSHHHHHHHHHHHTCSSCEEEEECHHHHHHHHHHHHHHHTT-TCCEEECCTTHHHHHTSTTCCTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecHHHHHHHHHHHHHHhc-CceEEEeCchHHhhhhhccCCCCCEEEE
Confidence 3444444443 347788888888877 999999999999999999998764 5577777667777777777888898888
Q ss_pred EEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcceEEEcCCCCc-------chhhH-HHHHHHHHHHHHHH
Q 006659 545 IATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVED-------CLQPV-INIVPLQLLAYHLT 616 (636)
Q Consensus 545 l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~~~~p~~~~-------~~~~~-~~~v~~q~la~~lA 616 (636)
+...|.+ ..+.+.++.++++|.+++.||+.....+.. .+|..+.+|...+ .+... ..+..+++|...++
T Consensus 103 iS~sG~t-~~~~~~~~~ak~~g~~vi~IT~~~~s~la~--~ad~~l~~~~~~e~~~~~~~~~~S~~~~~~~~d~L~~~~~ 179 (183)
T 2xhz_A 103 ISNSGES-SEITALIPVLKRLHVPLICITGRPESSMAR--AADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALL 179 (183)
T ss_dssp ECSSSCC-HHHHHHHHHHHTTTCCEEEEESCTTSHHHH--HSSEEEECCCSCCSSTTCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCC-HHHHHHHHHHHHCCCCEEEEECCCCChhHH--hCCEEEEeCCCccccccCCCcchHHHHHHHHHHHHHHHHH
Confidence 8876655 456778889999999999999977654321 2567888874322 23333 34556788888887
Q ss_pred HHcC
Q 006659 617 VLRG 620 (636)
Q Consensus 617 ~~~G 620 (636)
..+|
T Consensus 180 ~~~~ 183 (183)
T 2xhz_A 180 KARG 183 (183)
T ss_dssp HHHC
T ss_pred HhcC
Confidence 7665
No 59
>1t10_A GPI, glucose-6-phosphate isomerase, PGI, phosphohexose; phosphoglucose isomerase, substrate, D-fructose-6-phosphate; HET: F6P; 2.35A {Leishmania mexicana mexicana} SCOP: c.80.1.2
Probab=98.39 E-value=2.5e-06 Score=93.13 Aligned_cols=188 Identities=15% Similarity=0.082 Sum_probs=117.4
Q ss_pred CCeEEEEeechhHHHHHHHHHHHHHhc--CCcEEEee---ccchhcccCCC-CCCcEEEEEcCCCCCHHHHHHHHHHHH-
Q 006659 319 SRRIVFIGCGTSYNAALAARPILEELS--DLPVTMEI---ASDLVDRQAPI-YREDTAVFVSQSGETADTLQALEYASE- 391 (636)
Q Consensus 319 ~~~I~i~G~G~S~~aa~~~~~~~~~~~--~~~~~~~~---~~e~~~~~~~~-~~~dlvI~iS~SG~t~e~i~al~~ak~- 391 (636)
.+.|+++|+|+|+.....+...+.... +.++.+.+ +.++......+ .+++++|++|.||+|.||+.+++.+|+
T Consensus 196 i~~VV~IGIGGS~LGp~~v~~aL~~~~~~~~~v~fvsNvDp~~i~~~l~~l~~e~TLfIViSKSGtT~ETl~na~~ar~~ 275 (605)
T 1t10_A 196 IYNIVNIGIGGSDLGPVMVTEALKPFSKRDLHCFFVSNVDGTHMAEVLKQVNLEETIFIIASKTFTTQETLTNAMSARNA 275 (605)
T ss_dssp CCEEEEECCGGGTHHHHHHHHHTGGGSCSSSEEEEECCSSTHHHHHHHTTSCGGGEEEEEECSSSCCHHHHHHHHHHHHH
T ss_pred cceEEEEeccchHHHHHHHHHHhhhhccCCCeEEEEecCCHHHHHHHHhcCCCCcEEEEEEeCCCCChhHHHHHHHHHHH
Confidence 689999999999999999988887763 46666665 44443333344 467899999999999999999988886
Q ss_pred ---c-C-----------CeEEEEEcCCCCcccccc-C--eeEEcCCCCcccccchhhHHHHHHHHHHHHHHHhcCCCCcH
Q 006659 392 ---N-G-----------ALCVGITNTVGSAIARKT-H--CGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISTQ 453 (636)
Q Consensus 392 ---~-g-----------~~vi~IT~~~~s~La~~a-d--~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~~~ 453 (636)
+ | ..+|+||.+. +++++.. | .++.++... ....|..+.+.+ .+++.++ .
T Consensus 276 l~~~~g~~~~~~~~~~~~h~VavTt~~-s~~~~~gi~~~~~F~~~d~V----GGRySv~SaVGL--~la~~~G------~ 342 (605)
T 1t10_A 276 LMSYLKENGISTDGAVAKHFVALSTNT-EKVREFGIDTVNMFAFWDWV----GGRYSVWSAIGL--SVMLSIG------Y 342 (605)
T ss_dssp HHHHHHHTTCCCTTHHHHHEEEECSCH-HHHHHTTCCGGGEECCCTTS----CGGGCTTSGGGH--HHHHHHH------H
T ss_pred HHHhcccccccccccccCEEEEEeCCc-hHHHHcCCCcccEEeeeccC----CcchHHHHHHHH--HHHHhcC------h
Confidence 2 2 5789999874 7777765 4 356664321 111222222221 1222221 1
Q ss_pred HHHHHHHHHHhhhHHHHHHH-HhchH-HHHH----HHHHhcCCCeEEEEeCC-CCHHHHHHHHHHHHHhcccc
Q 006659 454 ARREAIIDGLCDLPNKVREV-LKLDQ-EMKV----LAKQLIAEQSLLVFGRG-YNYATALEGALKVKEVALMH 519 (636)
Q Consensus 454 ~~~~~~~~~l~~l~~~~~~~-~~~~~-~~~~----~a~~l~~~~~~~~lG~G-~~~~~A~e~alKl~E~~~~~ 519 (636)
+.++++++..+.+.+.+... ++.+. ..-. +...+.+.+...++-.. .....+....+-.+|..+..
T Consensus 343 d~~~~lL~GA~~md~~f~~a~l~~N~p~llall~~~~~~~~G~~~~~llpY~~~L~~f~~w~qQL~mES~GK~ 415 (605)
T 1t10_A 343 DNFVEFLTGAHVMDNHFASTPTEQNLPMMLALVGIWYNNFFGSETQAVLPYDQYLWRLPAYLQQLDMESNGKG 415 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHTTCCCEEEEEESSGGGTTHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHHHHHhhcCChhhCHHHHHHHHHHHHHhCCCCCeEEEEECHHHHHHHHHHHHHHHHHhcCCc
Confidence 34667777777776666553 12211 1111 22233466655555554 44566777788899999764
No 60
>1b0z_A Protein (phosphoglucose isomerase); autocrinefactor, neuroleukin, crystallography motility; 2.30A {Geobacillus stearothermophilus} SCOP: c.80.1.2 PDB: 1c7q_A* 1c7r_A* 2pgi_A
Probab=98.32 E-value=7.1e-07 Score=94.95 Aligned_cols=200 Identities=16% Similarity=0.095 Sum_probs=120.0
Q ss_pred cchHHHHHHHc-CCCeEEEEeechhHHHHHHHHHHHHHhc------CCcEEEe-ecc--ch-hcccCCC-CCCcEEEEEc
Q 006659 307 GGLKDHLKTIR-RSRRIVFIGCGTSYNAALAARPILEELS------DLPVTME-IAS--DL-VDRQAPI-YREDTAVFVS 374 (636)
Q Consensus 307 ~~l~~~~~~l~-~~~~I~i~G~G~S~~aa~~~~~~~~~~~------~~~~~~~-~~~--e~-~~~~~~~-~~~dlvI~iS 374 (636)
+.++++++.++ ..+.|+++|+|+|+..+..+.+.+.... +..+... +.. +. ......+ .+++++|++|
T Consensus 59 ~~i~~~a~~v~~~~~~VV~IGIGGS~LG~~~v~~aL~~~~~~~~~~~~~~~fv~~NvDp~~i~~~l~~l~~~~TlviviS 138 (445)
T 1b0z_A 59 SRIKQAAERIRNHSDALVVIGIGGSYLGARAAIEALSHTFHNQMNDTTQIYFAGQNISSTYISHLLDVLEGKDLSINVIS 138 (445)
T ss_dssp HHHHHHHHHHHHHCSEEEEECCGGGTHHHHHHHHHHSCTTGGGSTTSCEEEEESSSCCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHHHHhcCCEEEEEecChhHHHHHHHHHHHhhhcccccccCCceEEEeCCCCHHHHHHHHhhCCcCcEEEEEEe
Confidence 45566666664 5899999999999999998888876643 1334433 221 11 1112234 5789999999
Q ss_pred CCCCCHHHHHHHHHHHH-----cC-----CeEEEEEcCCCCccccccCee----EEcCCCCcccccchhhHHHHHHHHHH
Q 006659 375 QSGETADTLQALEYASE-----NG-----ALCVGITNTVGSAIARKTHCG----VHINAGAEIGVASTKAYTSQIVVMAM 440 (636)
Q Consensus 375 ~SG~t~e~i~al~~ak~-----~g-----~~vi~IT~~~~s~La~~ad~~----l~~~~~~e~~~~~t~s~~~~~~~l~l 440 (636)
.||+|.||+.+++.+|+ .| ..+|+||++..++|.+.|+.. +.++... ....|..+.+.++ .
T Consensus 139 KSGtT~ET~~~~~~ar~~l~~~~G~~~~~~~~vavT~~~~g~L~~~a~~~Gi~~F~~~d~V----GGRySv~SavGll-p 213 (445)
T 1b0z_A 139 KSGTTTEPAIAFRIFRDYMEKKYGKEEARKRIYVTTDRTKGALKKLADQEGYETFVIPDNI----GGRYSVLTAVGLL-P 213 (445)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHCHHHHGGGEEEEECSSCSHHHHHHHHHTCEEEECCTTB----CSCCTTSTTTTHH-H
T ss_pred CCCCCHHHHHHHHHHHHHHHHhcCchhhcCEEEEEecCCcchhHHHHHHhCCeEEeccCCC----CcccHHHHHHHHH-H
Confidence 99999999999999997 47 789999998888999887643 3443211 1112222222111 1
Q ss_pred HHHHHhcCCCCcHHHHHHHHHHHhhhHHHHHHHHhchHHHHHHH--HH---hcCCCeEEEEeCC-CCHHHHHHHHHHHHH
Q 006659 441 LALAIGGDTISTQARREAIIDGLCDLPNKVREVLKLDQEMKVLA--KQ---LIAEQSLLVFGRG-YNYATALEGALKVKE 514 (636)
Q Consensus 441 L~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~a--~~---l~~~~~~~~lG~G-~~~~~A~e~alKl~E 514 (636)
+++ .+. + ++++++..+.+.+.+...--.++..-.+| .. -.+.+...++-.. .....+....+-.+|
T Consensus 214 ~al-~G~------d-~~~lL~GA~~md~~~~~~~~~~N~~~~lal~~~~~~~~g~~~~~~~pY~~~L~~f~~w~qQL~~E 285 (445)
T 1b0z_A 214 IAV-AGL------N-IDRMMEGAASAYHKYNNPDLLTNESYQYAAVRNILYRKGKAIELLVNYEPSLHYVSEWWKQLFGE 285 (445)
T ss_dssp HHH-HTC------C-HHHHHHHHHHHHHHHCCCCGGGCHHHHHHHHHHHHHHTTCCEEEEEESSGGGHHHHHHHHHHHHH
T ss_pred HHh-cCC------C-HHHHHHHHHHHHHHhhcCCcccCHHHHHHHHHHHHHhCCCCeEEEEEchHHHHHHHHHHHHHHHH
Confidence 111 221 1 45566666655554433210112222222 11 1255655555554 556777788888999
Q ss_pred hcccc
Q 006659 515 VALMH 519 (636)
Q Consensus 515 ~~~~~ 519 (636)
..+..
T Consensus 286 S~GK~ 290 (445)
T 1b0z_A 286 SEGKD 290 (445)
T ss_dssp HHCCT
T ss_pred hccCC
Confidence 88654
No 61
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=98.28 E-value=6.9e-06 Score=85.81 Aligned_cols=138 Identities=12% Similarity=0.113 Sum_probs=107.7
Q ss_pred hHHHHHHHHHhcC--CCeEEEEeCCCCHHHHHHHHHHHHHhccccccccccccccccccccccCCCCeEEEEeCCcchHH
Q 006659 477 DQEMKVLAKQLIA--EQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSK 554 (636)
Q Consensus 477 ~~~~~~~a~~l~~--~~~~~~lG~G~~~~~A~e~alKl~E~~~~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~~~~~~~~ 554 (636)
.+.++++++.+.. .++++++|.|.++.+|..++.++....++++......||.+.....+++++.+|++...|.+ ..
T Consensus 39 ~~~i~~~~~~i~~~~~~~I~i~G~G~S~~~a~~~~~~l~~~~g~~~~~~~~~e~~~~~~~~l~~~dlvI~iS~SG~t-~e 117 (355)
T 2a3n_A 39 RQKAEQVADEIYQAGFSSLFFASVGGSLAPMMAINEFAKELTTLPVYVEQAAELIHKGNKRLNKDSVVITLSKSGDT-KE 117 (355)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEEECGGGHHHHHHHHHHHHHHCCSCEEEEEHHHHHHHCCTTCCTTCEEEEECSSSCC-HH
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEccHHHHHHHHHHHHHHhhcCCeEEEcCcHHHHhhchhcCCCCCEEEEEeCCCCC-HH
Confidence 3456667777666 78999999999999999999888887889999888889988776667888988888877765 44
Q ss_pred HHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcceEEEcCCCCcchhhHHHHHHHHHHHHHHHHHcC
Q 006659 555 QQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVEDCLQPVINIVPLQLLAYHLTVLRG 620 (636)
Q Consensus 555 ~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~q~la~~lA~~~G 620 (636)
+.+.++.++++|.+++.||+..+..+. ..+|..+.+|...+. ......+++++..++..+|
T Consensus 118 ~~~a~~~ak~~Ga~vi~IT~~~~S~La--~~ad~~l~~~~~~~~---~~~~~~~~ll~~~l~~~~~ 178 (355)
T 2a3n_A 118 SVAIAEWCKAQGIRVVAITKNADSPLA--QAATWHIPMRHKNGV---EYEYMLLYWLFFRVLSRNN 178 (355)
T ss_dssp HHHHHHHHHHTTCEEEEEESCTTSHHH--HTCSEEEECCCSSCH---HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCeEEEEECCCCChhh--HhCCEEEEeCCCcch---hHHHHHHHHHHHHHHHHcC
Confidence 667888899999999999997655432 135778888854332 3445567888888888888
No 62
>1moq_A Glucosamine 6-phosphate synthase; glutamine amidotransferase; HET: GLP MES; 1.57A {Escherichia coli} SCOP: c.80.1.1 PDB: 1mor_A* 1mos_A*
Probab=98.24 E-value=1.2e-05 Score=84.50 Aligned_cols=139 Identities=15% Similarity=0.136 Sum_probs=109.0
Q ss_pred cchHHHHHHHcCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEeeccchhcccC-CCCCCcEEEEEcCCCCC-HHHHH
Q 006659 307 GGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIASDLVDRQA-PIYREDTAVFVSQSGET-ADTLQ 384 (636)
Q Consensus 307 ~~l~~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~dlvI~iS~SG~t-~e~i~ 384 (636)
+.++++++.+.+.++++++|.|.++.+|..++..+..+..+++..+...|+.|.+. .++++..+|++...|.+ ..+.+
T Consensus 212 ~~~~~~a~~~~~~~~~~~lG~G~~~~~A~E~aLKl~E~~~i~ae~~~~~E~~HGp~~lv~~~~~vi~~~~~~~~~~~~~~ 291 (368)
T 1moq_A 212 KRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKS 291 (368)
T ss_dssp THHHHHHHHHTTCSEEEEEECGGGHHHHHHHHHHHHHHHCCEEEEEEGGGGGGTGGGGCSTTSCEEEESCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEeCCCCHHHHHHHHHHHHHHhccccccccHHHhccCcHHHcCCCceEEEEEcCCchHHHHHH
Confidence 35678888999999999999999999999999999999999999999999988764 46788889998877766 67788
Q ss_pred HHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCcccccchhhHHHHHHHHHHHHHHHhcCCC
Q 006659 385 ALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTI 450 (636)
Q Consensus 385 al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~ 450 (636)
.++.++++|+++++|++...+.+...+|..|.++..++. -+....+..+.+|+..++..++
T Consensus 292 ~~~e~~~~g~~v~~i~~~~~~~~~~~~~~~i~~p~~~~~-----l~pl~~~v~~qlla~~~A~~~G 352 (368)
T 1moq_A 292 NIEEVRARGGQLYVFADQDAGFVSSDNMHIIEMPHVEEV-----IAPIFYTVPLQLLAYHVALIKG 352 (368)
T ss_dssp HHHHTGGGTCCEEEEEEGGGCCCCBTTEEEEEECCCCGG-----GHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCeEEEEECCCcchhcccCCceEEcCCCchh-----HHHHHHHHHHHHHHHHHHHHcC
Confidence 889999999999999987545566777777766643321 2222334466777777765544
No 63
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=98.20 E-value=1.8e-05 Score=81.81 Aligned_cols=134 Identities=13% Similarity=0.033 Sum_probs=97.9
Q ss_pred HHHHhhhHHHHHHHHhc-hHHHHHHHHHh--cCCCeEEEEeCCCCHHHHHHHHHHHHHhccccccccccccccccccccc
Q 006659 460 IDGLCDLPNKVREVLKL-DQEMKVLAKQL--IAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALV 536 (636)
Q Consensus 460 ~~~l~~l~~~~~~~~~~-~~~~~~~a~~l--~~~~~~~~lG~G~~~~~A~e~alKl~E~~~~~a~~~~~~Ef~HGp~~~~ 536 (636)
.+++.+-|+.+++.++. .+..+++++.+ .+.++++++|.|.++.+|..++-++....++++......++.+-....+
T Consensus 9 ~kEI~eqP~~~~~~l~~~~~~~~~~~~~i~~~~~~~I~i~G~G~S~~aa~~~~~~l~~~~g~~v~~~~~~~~~~~~~~~~ 88 (334)
T 3hba_A 9 EQEARTAPQKIAEQLLANDAITESLGSVLREFKPKFVMIVGRGSSDHAGVFAKYLFEIEASIPTFAAAPSVASVYGKTLK 88 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEESSGGGCHHHHHHHHHHHHHHCCCEEECCHHHHHTSCCCCC
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCCEEEEEEechHHHHHHHHHHHHHHHhCCcEEEEcchHHHHhcccCC
Confidence 34555566666666653 34456666665 7889999999999999999999999988898888754443333333456
Q ss_pred cCCCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcceEEEcCCCC
Q 006659 537 DENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVE 596 (636)
Q Consensus 537 ~~~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~~~~p~~~ 596 (636)
++++.+|++...|.+ ..+.+.++.++++|.+++.|++..+..+.. .+|..+.++..+
T Consensus 89 ~~~dl~i~iS~SG~T-~e~~~a~~~ak~~g~~~i~IT~~~~S~la~--~ad~~l~~~~g~ 145 (334)
T 3hba_A 89 LAGGLVIVISQSGRS-PDILAQARMAKNAGAFCVALVNDETAPIKD--IVDVVIPLRAGE 145 (334)
T ss_dssp CTTCEEEEEESSSCC-HHHHHHHHHHHHTTCEEEEEESCTTSGGGG--TSSEEEECCCCC
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHcCCcEEEEeCCCCChHHH--hcCEeeeecCCC
Confidence 788888888877765 445678888899999999999987665432 357888887543
No 64
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=98.16 E-value=1.7e-05 Score=76.49 Aligned_cols=111 Identities=19% Similarity=0.159 Sum_probs=78.3
Q ss_pred HHHHHHHhcCCCeEEEEeCCCCHHHHHHHH------HHHHHhccccccccc-ccc-------c------cccccccccCC
Q 006659 480 MKVLAKQLIAEQSLLVFGRGYNYATALEGA------LKVKEVALMHSEGIL-AGE-------M------KHGPLALVDEN 539 (636)
Q Consensus 480 ~~~~a~~l~~~~~~~~lG~G~~~~~A~e~a------lKl~E~~~~~a~~~~-~~E-------f------~HGp~~~~~~~ 539 (636)
++.+++.+...++++++|.|.++.+|..++ .++.+ ..+++..+. ... + .|.....++++
T Consensus 54 ~~~i~~~l~~~~~I~i~G~G~S~~~A~~~a~~l~~~~~~~~-~g~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (212)
T 2i2w_A 54 AVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENR-PGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREG 132 (212)
T ss_dssp HHHHHHHHHTTCCEEEEESTHHHHHHHHHHHHHHHHHCTTS-SSCSEEECCCTTCGGGGSCCCSCSSHHHHHHHHHCCTT
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHhhhcccC-CCCeEEecCChHHhhHhhccCCHHHHHHHHHHhcCCCC
Confidence 344444577889999999999999999888 34333 345555543 221 1 13333457888
Q ss_pred CCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcceEEEcCC
Q 006659 540 LPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQ 594 (636)
Q Consensus 540 ~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~~~~p~ 594 (636)
+.+|++...|.+ ..+.+.++.++++|.+++.||+.....+. ..+|..+.+|.
T Consensus 133 DvvI~iS~SG~t-~~~i~~~~~ak~~G~~vIaIT~~~~s~La--~~aD~~l~~~~ 184 (212)
T 2i2w_A 133 DVLLGISTSGNS-ANVIKAIAAAREKGMKVITLTGKDGGKMA--GTADIEIRVPH 184 (212)
T ss_dssp CEEEEECSSSCC-HHHHHHHHHHHHHTCEEEEEEETTCGGGT--TCSSEEEEECC
T ss_pred CEEEEEECCCCC-HHHHHHHHHHHHCCCeEEEEECCCCCchH--HhCCEEEEcCC
Confidence 888888877766 55678889999999999999997755442 23578888886
No 65
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=98.13 E-value=3.2e-05 Score=80.86 Aligned_cols=158 Identities=13% Similarity=0.126 Sum_probs=115.7
Q ss_pred HHHHhhhHHHHHHHHhc--hHHHHHHHH-HhcCCCeEEEEeCCCCHHHHHHHHHHHHHhccccccccccccccccccccc
Q 006659 460 IDGLCDLPNKVREVLKL--DQEMKVLAK-QLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALV 536 (636)
Q Consensus 460 ~~~l~~l~~~~~~~~~~--~~~~~~~a~-~l~~~~~~~~lG~G~~~~~A~e~alKl~E~~~~~a~~~~~~Ef~HGp~~~~ 536 (636)
.+++.+-|+.++++++. .+..+.+.. .+.+.++++++|.|.++.+|..++-.+....++++..+...||.+.+.. +
T Consensus 17 ~kEI~eqP~~l~~~l~~~~~~~~~~~~~~~~~~a~~I~i~G~GtS~~aa~~~~~~~~~~~g~~~~~~~~se~~~~~~~-~ 95 (366)
T 3knz_A 17 FQGMNETPLRLLEMLTQTREDLWRAAQALTERGVTRIILTGSGTSYHGALTARTFMQRWCALPVDVCWPFMLDDETLA-R 95 (366)
T ss_dssp HHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHHHTSCEEEECGGGCCHHHHH-H
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcCCCEEEEEEechHHHHHHHHHHHHHHHHCCCeEEEcchHHHhhccC-C
Confidence 45566677777777754 233344432 4578899999999999999999999988888999999999999886543 4
Q ss_pred cCCCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcceEEEcCCCCcc----hhhHH-HHHHHHHH
Q 006659 537 DENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVEDC----LQPVI-NIVPLQLL 611 (636)
Q Consensus 537 ~~~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~~~~p~~~~~----~~~~~-~~v~~q~l 611 (636)
++++.+|++...|.+ ..+.+.++.++++|.+++.||+..+..+.. .+|..+.++..++. ...+. .++.+.+|
T Consensus 96 ~~~dlvI~iS~SGeT-~e~l~a~~~ak~~Ga~~IaIT~~~~S~La~--~aD~~l~~~~g~E~~~a~tks~tsql~~l~lL 172 (366)
T 3knz_A 96 SGKALVVGISQGGGS-LSTLAAMERARNVGHITASMAGVAPATIDR--AADYILTVPCGEETAGAKTKGYHCTVLNLMLL 172 (366)
T ss_dssp SCSEEEEEEESSSCC-HHHHHHHHHHHHTTCEEEEEESSSSCGGGG--GCSEECCCCCCC------CTHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCC-HHHHHHHHHHHHcCCCEEEEECCCCChhhh--hcCEEEecCCCccccccccHHHHHHHHHHHHH
Confidence 788888888877765 445678888999999999999987665432 35677777643331 22333 34467888
Q ss_pred HHHHHHHcCC
Q 006659 612 AYHLTVLRGY 621 (636)
Q Consensus 612 a~~lA~~~G~ 621 (636)
+..++..+|.
T Consensus 173 a~~l~~~~g~ 182 (366)
T 3knz_A 173 ALAVAGQQQR 182 (366)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHhCC
Confidence 8888888874
No 66
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=98.13 E-value=6.4e-06 Score=85.07 Aligned_cols=143 Identities=11% Similarity=0.069 Sum_probs=107.8
Q ss_pred hchHHHHHHHHHhc--CCCeEEEEeCCCCHHHHHHHHHHHHHhc-cccccccccccccccccccccCCCCeEEEEeCCcc
Q 006659 475 KLDQEMKVLAKQLI--AEQSLLVFGRGYNYATALEGALKVKEVA-LMHSEGILAGEMKHGPLALVDENLPILVIATRDAC 551 (636)
Q Consensus 475 ~~~~~~~~~a~~l~--~~~~~~~lG~G~~~~~A~e~alKl~E~~-~~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~~~~~ 551 (636)
+..+.++++++.+. +.++++++|.|.++.+|..++.+|.... ++++......||.+.+...+++++.+|++...|.+
T Consensus 8 ~~~~~i~~~v~~i~~~~~~~I~i~G~GtS~~aa~~~~~~l~~~~~g~~~~~~~~~e~~~~~~~~l~~~dlvI~iS~SG~T 87 (329)
T 3eua_A 8 KVNREVQAFLQDLKGKTIDHVFFVACGGSSAIMYPSKYVFDRESKSINSDLYSANEFIQRNPVQLGEKSLVILCSHSGNT 87 (329)
T ss_dssp GSCHHHHHHHHHHTTCCCCEEEEEECTHHHHTTHHHHHHHHHHCSSCEEEEEEHHHHHHHCCTTCSTTEEEEEEESSSCC
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEEccHHHHHHHHHHHHHHHhcCCCeEEEEccHHHHhcCccCCCCCcEEEEEcCCCCC
Confidence 34566778888887 7899999999999999999999999887 99999999999999876667888888888877765
Q ss_pred hHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcceEEEcCCCCcchhhHHHHHHHHHHHHHHHHHcC
Q 006659 552 FSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVEDCLQPVINIVPLQLLAYHLTVLRG 620 (636)
Q Consensus 552 ~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~q~la~~lA~~~G 620 (636)
..+.+.++.++++|.+++.|++..+..+.. .+|..+.++..++.--+......+.+++..++..+|
T Consensus 88 -~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~--~ad~~l~~~~g~e~~va~t~~~~l~~la~~l~~~~~ 153 (329)
T 3eua_A 88 -PETVKAAAFARGKGALTIAMTFKPESPLAQ--EAQYVAQYDWGDEALAINTNYGVLYQIVFGTLQVLE 153 (329)
T ss_dssp -HHHHHHHHHHHHTTCEEEEEESCTTSHHHH--HSSEEEECCCSTTCCGGGSHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHCCCCEEEEECCCCChHHH--hCCEEEEeCCCCccchhhHHHHHHHHHHHHHHHHhc
Confidence 456678888999999999999877654421 356778887544321111122355566666666655
No 67
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=98.13 E-value=4.5e-05 Score=80.16 Aligned_cols=140 Identities=11% Similarity=0.134 Sum_probs=107.3
Q ss_pred cchHHHHHHHcCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEeeccchhcccC-CCCCCcEEEEEcCCCC-CHHHHH
Q 006659 307 GGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIASDLVDRQA-PIYREDTAVFVSQSGE-TADTLQ 384 (636)
Q Consensus 307 ~~l~~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~dlvI~iS~SG~-t~e~i~ 384 (636)
+.++++++.+...++++++|.|.++.+|..++-.+..+..+++..+...|+.|.+. .++++..||++.-.+. ...++.
T Consensus 219 ~~~~~~a~~~~~~~~~~~lG~G~~~~~A~E~aLKl~E~s~i~ae~~~~~E~~HGp~ali~~~~~vi~l~~~~~~~~~~~~ 298 (375)
T 2zj3_A 219 DEIQKLATELYHQKSVLIMGRGYHYATCLEGALKIKEITYMHSEGILAGELKHGPLALVDKLMPVIMIIMRDHTYAKCQN 298 (375)
T ss_dssp HHHHHHHHHHTTCSEEEEEECGGGHHHHHHHHHHHHHHHCCEEEEEEGGGGGGTGGGGCSTTSCEEEEECSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHHhhhccccccHHHhccCcHHHcCCCCeEEEEECCChhHHHHHH
Confidence 34678888999999999999999999999999999999999999999999988764 4677777777765555 466788
Q ss_pred HHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCcccccchhhHHHHHHHHHHHHHHHhcCCCC
Q 006659 385 ALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTIS 451 (636)
Q Consensus 385 al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~ 451 (636)
.++..+.+|+++++|++..+..+...+|.++.++..++. -+....+..+.+|+..++..++.
T Consensus 299 ~~~e~~~rg~~v~~i~~~~~~~~~~~~~~~i~~p~~~~~-----l~pl~~~v~~Qlla~~~A~~~G~ 360 (375)
T 2zj3_A 299 ALQQVVARQGRPVVICDKEDTETIKNTKRTIKVPHSVDC-----LQGILSVIPLQLLAFHLAVLRGY 360 (375)
T ss_dssp HHHHHHHTTCCCEEEEETTCHHHHHHCSSEEEECCCCTT-----THHHHHTHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCeEEEEECCCchhhhhccCcEEEcCCCchh-----HHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999987555555566777777653321 12223345667777777765543
No 68
>2poc_A D-fructose-6- PH, isomerase domain of glutamine-fructose-6-phosphat transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=98.13 E-value=3.6e-05 Score=80.68 Aligned_cols=142 Identities=11% Similarity=0.142 Sum_probs=100.7
Q ss_pred chHHHHHH-HcCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEeeccchhcccC-CCCCCcEEEEEcCCC-CCHHHHH
Q 006659 308 GLKDHLKT-IRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIASDLVDRQA-PIYREDTAVFVSQSG-ETADTLQ 384 (636)
Q Consensus 308 ~l~~~~~~-l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~dlvI~iS~SG-~t~e~i~ 384 (636)
.++++++. +.+.++++++|.|..+.+|..++..+..+..+++..+...|+.|.+. .++++..+|++...| ....++.
T Consensus 210 ~~~~~a~~~~~~~~~~~~lG~G~~~~~A~e~alKl~E~s~i~ae~~~a~E~~HGp~~lv~~~~~vi~i~~~~~~~~~~~~ 289 (367)
T 2poc_A 210 KIKDLCNSSLNDQKSLLLLGRGYQFATALEGALKIKEISYMHSEGVLAGELKHGILALVDEDLPIIAFATRDSLFPKVMS 289 (367)
T ss_dssp HHHHHHHSGGGGCSEEEEEECGGGHHHHHHHHHHHHHHHCCEEEEEETTCC-----------CCEEEECCGGGCCHHHHH
T ss_pred HHHHHHHHHhccCCcEEEEcCCCChHHHHHHHHHHHHHhccccccccHHHhccchHhhccCCCcEEEEEcCChhHHHHHH
Confidence 46778888 88999999999999999999999999999999999999999988764 456777777765444 4678889
Q ss_pred HHHHHHHcCCeEEEEEcCCCCccccccC-eeEEcCCCCcccccchhhHHHHHHHHHHHHHHHhcCCCCcHH
Q 006659 385 ALEYASENGALCVGITNTVGSAIARKTH-CGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISTQA 454 (636)
Q Consensus 385 al~~ak~~g~~vi~IT~~~~s~La~~ad-~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~~~~ 454 (636)
.++..+.+|+++++|++..+..+...+| .++.++..++. -+....+..+.+|+..++..++.+.+
T Consensus 290 ~~~e~~~rg~~v~~i~~~~~~~~~~~~~~~~i~~p~~~~~-----l~pl~~~~~~Qlla~~~A~~~G~dpd 355 (367)
T 2poc_A 290 AIEQVTARDGRPIVICNEGDAIISNDKVHTTLEVPETVDC-----LQGLLNVIPLQLISYWLAVNRGIDVD 355 (367)
T ss_dssp HHHHHHHTTCCCEEEEETTCCSCC---CCEEEEECCCCGG-----GHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHcCCeEEEEECCCchhhhccCCccEEEeCCCchh-----HHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 9999999999999999876666766666 77777653321 22334456677788888776665433
No 69
>2e5f_A Hypothetical protein PH0510; structural genomics, sugar binding protein, NPPSFA, national on protein structural and functional analyses; 1.35A {Pyrococcus horikoshii} PDB: 2dec_A* 2df8_A 2cb0_A*
Probab=98.13 E-value=2.7e-05 Score=80.26 Aligned_cols=132 Identities=13% Similarity=0.112 Sum_probs=100.7
Q ss_pred chHHHHHHHcCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEeeccchhcccC-CCCCCcEEEEEcCCCCCHH-HHHH
Q 006659 308 GLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIASDLVDRQA-PIYREDTAVFVSQSGETAD-TLQA 385 (636)
Q Consensus 308 ~l~~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~dlvI~iS~SG~t~e-~i~a 385 (636)
.++++++.+.+ ++++++|.|..+.+|..++-.+.....+++......|+.|.+. .++++..+|++. |.+.+ +.+.
T Consensus 177 ~~~~~a~~~~~-~~~~~lG~G~~~~~A~E~aLKl~E~~~i~a~~~~~~E~~HGp~~li~~~~~vi~~~--~~~~~~~~~~ 253 (325)
T 2e5f_A 177 YIREIVESFDF-QNIIFLGSGLLYPVALEASLKMKEMSIFWSEAYPTFEVRHGFKAIADEKTLVVLMV--EEPFEWHEKL 253 (325)
T ss_dssp HHHHHHHHCCC-SEEEEEECTTHHHHHHHHHHHHHHHHCCEEEEEEGGGGGTTGGGGCSTTEEEEEEE--SSCCHHHHHH
T ss_pred HHHHHHHHhcC-CCEEEEccCCCHHHHHHHHHHHHHHHHHHhhhcCHHHhhhccHhhcCCCCeEEEEe--CchHHHHHHH
Confidence 46788888889 9999999999999999999999999999999999999988764 467888888888 55544 9999
Q ss_pred HHHHHHcCCeEEEEEcCCCCcccccc-CeeEEcCCCCcccccchhhHHHHHHHHHHHHHHHhcCCCC
Q 006659 386 LEYASENGALCVGITNTVGSAIARKT-HCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTIS 451 (636)
Q Consensus 386 l~~ak~~g~~vi~IT~~~~s~La~~a-d~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~ 451 (636)
++..+++|+++++|++... ..+ |..+.++..++. . +....+..+.+|+..++..++.
T Consensus 254 ~~e~~~~g~~v~~i~~~~~----~~~~~~~~~~p~~~~~-l----~pl~~~~~~qlla~~~a~~~G~ 311 (325)
T 2e5f_A 254 VKEFKNQGAKVLVISNSPQ----DLGQDYSIELPRLSKD-A----NPIPYLPIVQLLSYYKAVSRGL 311 (325)
T ss_dssp HHHHHHTTCEEEEEESCCC----CCSCSEEEECCCCCTT-T----TTTTHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCeEEEEeCCcc----cccCCcEEEeCCCchh-H----HHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999998532 334 566777643222 1 1112245566677777655543
No 70
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=98.12 E-value=2.6e-05 Score=81.16 Aligned_cols=157 Identities=12% Similarity=0.147 Sum_probs=113.4
Q ss_pred HHHHhhhHHHHHHHHhc-hHHHHHHHHHhcCCCeEEEEeCCCCHHHHHHHHHHHHHhccccccccccccccccccccccC
Q 006659 460 IDGLCDLPNKVREVLKL-DQEMKVLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDE 538 (636)
Q Consensus 460 ~~~l~~l~~~~~~~~~~-~~~~~~~a~~l~~~~~~~~lG~G~~~~~A~e~alKl~E~~~~~a~~~~~~Ef~HGp~~~~~~ 538 (636)
.+++.+-|+.++++++. .+....+ ...+.++++++|.|.++.+|..++-++....++++..+...||.|......++
T Consensus 5 ~keI~eqP~~~~~~l~~~~~~~~~~--~~~~~~~I~i~G~G~S~~~a~~~~~~l~~~~g~~~~~~~~se~~~~~~~~~~~ 82 (352)
T 3g68_A 5 QDYMLETPVRMREIISNADSLFNEV--KRTNLKKIIITGSGTSYHSGVQVQPYLQNLLDIDVVKMYPFMITEDTFKFDNE 82 (352)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHTTTG--GGSCCSEEEEECSHHHHHHHHHHHHHHHHHCSSEEEEECGGGCCGGGGSSCCT
T ss_pred HHHHHHHHHHHHHHHHhhHHhhhHh--hhcCCCEEEEEEeehHHHHHHHHHHHHHHHhCCcEEEEcchhhhhcccCCCCC
Confidence 45566667777777653 1111111 14678899999999999999999999999899999999999998865544447
Q ss_pred CCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcceEEEcCCCCc----chhhHHH-HHHHHHHHH
Q 006659 539 NLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVED----CLQPVIN-IVPLQLLAY 613 (636)
Q Consensus 539 ~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~~~~p~~~~----~~~~~~~-~v~~q~la~ 613 (636)
++.+|++...|.+ ..+.+.++.++++|.+++.|++..+..+.. .+|..+.++..++ ....+.. ++.+.+|+.
T Consensus 83 ~dlvI~iS~SG~T-~e~l~a~~~ak~~ga~~iaIT~~~~S~La~--~aD~~l~~~~g~E~~va~tksf~~ql~~l~~La~ 159 (352)
T 3g68_A 83 NTLVVGVSQGGSS-YSTYNAMKLAEDKGCKIASMAGCKNALIDE--ISDYILTVNCGEEKSGAKTKGYYCTKLNLMLLGL 159 (352)
T ss_dssp TEEEEEEESSSCC-HHHHHHHHHHHHTTCEEEEEESSTTCGGGG--GCSEECCCCCCCCCCSSCSHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCC-HHHHHHHHHHHHCCCCEEEEeCCCCChHHH--hCCEEEEeCCCCCccccccHHHHHHHHHHHHHHH
Confidence 8888888877765 445678888999999999999987665432 3567777764332 2233433 345688899
Q ss_pred HHHHHcCC
Q 006659 614 HLTVLRGY 621 (636)
Q Consensus 614 ~lA~~~G~ 621 (636)
.++..+|.
T Consensus 160 ~l~~~~g~ 167 (352)
T 3g68_A 160 QIAREKGI 167 (352)
T ss_dssp HHHHHTTS
T ss_pred HHHHHcCC
Confidence 99988874
No 71
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=98.11 E-value=2.7e-05 Score=80.79 Aligned_cols=134 Identities=9% Similarity=0.033 Sum_probs=96.5
Q ss_pred HHHHhhhHHHHHHHHhc-hHHHHHHHHHh--cCCCeEEEEeCCCCHHHHHHHHHHHHHhccccccccccccccccccccc
Q 006659 460 IDGLCDLPNKVREVLKL-DQEMKVLAKQL--IAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALV 536 (636)
Q Consensus 460 ~~~l~~l~~~~~~~~~~-~~~~~~~a~~l--~~~~~~~~lG~G~~~~~A~e~alKl~E~~~~~a~~~~~~Ef~HGp~~~~ 536 (636)
.+++.+-|+.+++.++. ....+++++.+ .+.++++++|.|.++.+|..++-++....++++......++.|-....+
T Consensus 10 ~kEI~eqP~~~~~~l~~~~~~~~~~~~~~~~~~~~~I~i~G~G~S~~aa~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 89 (344)
T 3fj1_A 10 RREIDEIPEAVQRLLDHGAQDVARVAAVLRLRDPSFVATVARGSSDHVCTYLSYAAELLLGLPVASLGPSVASVYDARLR 89 (344)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEECCTHHHHHHHHHHHHHHHHHCCCEEECCTHHHHTTCCCCC
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCCEEEEEEechHHHHHHHHHHHHHHHhCCcEEEecchHHhhhcccCC
Confidence 34555566666666653 34455666655 7889999999999999999999999888898888654333333233356
Q ss_pred cCCCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcceEEEcCCCC
Q 006659 537 DENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVE 596 (636)
Q Consensus 537 ~~~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~~~~p~~~ 596 (636)
++++.+|++...|.+ ..+.+.++.++++|.+++.|++..+..+.. .+|..+.++..+
T Consensus 90 ~~~dlvI~iS~SG~T-~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~--~ad~~l~~~~g~ 146 (344)
T 3fj1_A 90 LDRALCLAVSQSGKS-PDIVAMTRNAGRDGALCVALTNDAASPLAG--VSAHTIDIHAGP 146 (344)
T ss_dssp CTTEEEEEEESSSCC-HHHHHHHHHHHHTTCEEEEEESCTTSHHHH--TSSEEEECCCCC
T ss_pred CCCcEEEEEcCCCCC-HHHHHHHHHHHHCCCcEEEEECCCCChHHH--hcCEeeecCCCC
Confidence 788888888877765 445678888899999999999877654421 357888887533
No 72
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=98.08 E-value=4.5e-05 Score=72.58 Aligned_cols=138 Identities=16% Similarity=0.165 Sum_probs=93.6
Q ss_pred HHHHHHHHHhcCCCeEEEEeCCCCHHHHHHHHHHHH-----Hhccccccccccc---------ccccccc------cccc
Q 006659 478 QEMKVLAKQLIAEQSLLVFGRGYNYATALEGALKVK-----EVALMHSEGILAG---------EMKHGPL------ALVD 537 (636)
Q Consensus 478 ~~~~~~a~~l~~~~~~~~lG~G~~~~~A~e~alKl~-----E~~~~~a~~~~~~---------Ef~HGp~------~~~~ 537 (636)
+.++.+++.+...++++++|.|.++.+|.+++.++. ....+++...... ++.+..+ ..++
T Consensus 33 ~~~~~i~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 112 (199)
T 1x92_A 33 QASLVMVNALLNEGKILSCGNGGSAGDAQHFSSELLNRFERERPSLPAVALTTDSSTITSIANDYSYNEVFSKQIRALGQ 112 (199)
T ss_dssp HHHHHHHHHHHTTCCEEEECSTHHHHHHHHHHHHHHTCSSSCCCCCCEEETTCCHHHHHHHHHHTCGGGTTHHHHHHHCC
T ss_pred HHHHHHHHHHHCCCEEEEEcCchhHHHHHHHHHHHhcCcccCCCCCceEecCCChhHHHHhhcCccHHHHHHHHHHhCCC
Confidence 445566677888899999999999999999999984 3355666655422 3333321 2367
Q ss_pred CCCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCC---cceEEEcCCCCcchhhHHHHHHHHHHHHH
Q 006659 538 ENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGG---SCRVIEVPQVEDCLQPVINIVPLQLLAYH 614 (636)
Q Consensus 538 ~~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~---~~~~~~~p~~~~~~~~~~~~v~~q~la~~ 614 (636)
+++.+|++...|.+ ..+.+.++.++++|.+++.||+.....+. .. +|..+.+|...+.......+..++.|+..
T Consensus 113 ~~DvvI~iS~SG~t-~~~i~~~~~ak~~g~~vI~IT~~~~s~La--~~~~~ad~~l~~~~~~~~~~~~~~l~i~~~L~~~ 189 (199)
T 1x92_A 113 PGDVLLAISTSGNS-ANVIQAIQAAHDREMLVVALTGRDGGGMA--SLLLPEDVEIRVPSKITARIQEVHLLAIHCLCDL 189 (199)
T ss_dssp TTCEEEEECSSSCC-HHHHHHHHHHHHTTCEEEEEECTTCHHHH--HHCCTTCEEEECSCSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCC-HHHHHHHHHHHHCCCEEEEEECCCCCcHH--hccccCCEEEEeCCCchHHHHHHHHHHHHHHHHH
Confidence 88888888776655 45567889999999999999997654332 13 57788888644332222334445666666
Q ss_pred HHHH
Q 006659 615 LTVL 618 (636)
Q Consensus 615 lA~~ 618 (636)
++..
T Consensus 190 ~~~~ 193 (199)
T 1x92_A 190 IDRQ 193 (199)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 73
>2aml_A SIS domain protein; 46906266, LMO0035 protein, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.08 E-value=3.8e-05 Score=80.65 Aligned_cols=158 Identities=9% Similarity=0.044 Sum_probs=114.1
Q ss_pred HHHHhhhHHHHHHHHhc-hHHHHHHHHHhcC-CCeEEEEeCCCCHHHHHHHHHHHHHhcccccccccccccccccccccc
Q 006659 460 IDGLCDLPNKVREVLKL-DQEMKVLAKQLIA-EQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVD 537 (636)
Q Consensus 460 ~~~l~~l~~~~~~~~~~-~~~~~~~a~~l~~-~~~~~~lG~G~~~~~A~e~alKl~E~~~~~a~~~~~~Ef~HGp~~~~~ 537 (636)
.+++.+-|+.++++++. .+.+.++++.+.. .++++++|.|.++.+|..++..+....++++......||.+.. ..++
T Consensus 18 ~kEI~eqp~~~~~~~~~~~~~l~~~~~~i~~~~~~I~i~G~G~S~~~a~~~~~~l~~~~g~~v~~~~~~~~~~~~-~~~~ 96 (373)
T 2aml_A 18 MTYINEEEEMCRVILADFQTNAEKLESLVKNGAKEWLILATGSSLNAAQSAKYYIENLADVRITIEEPFNHLYYE-KLSS 96 (373)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTCCCEEEEEECHHHHHHHHHHHHHHHHHSSCEEEEECHHHHHHHC-CCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCEEEEEEecHHHHHHHHHHHHHHHHhCCcEEEECchhHHHhc-cCCC
Confidence 34555667777776654 3456666666544 6899999999999999999888888888888888777877653 2377
Q ss_pred CCCCeEEEEeCCcchHHHHHHHHHHHhc-CCeEEEEecCCCCcCCCCCCcceEEEcCCCCc----chhhHHH-HHHHHHH
Q 006659 538 ENLPILVIATRDACFSKQQSVIQQLHAR-KGRLIVMCSKGDAASIFPGGSCRVIEVPQVED----CLQPVIN-IVPLQLL 611 (636)
Q Consensus 538 ~~~~vi~l~~~~~~~~~~~~~~~~~~~~-g~~v~vi~~~~~~~~~~~~~~~~~~~~p~~~~----~~~~~~~-~v~~q~l 611 (636)
+++.+|++...|.+ ..+.+.++.++++ |.+++.||+..+..+.. .+|..+.+|...+ ....+.. ++.+.++
T Consensus 97 ~~dlvI~iS~SG~T-~e~l~a~~~ak~~~Ga~vIaIT~~~~S~La~--~ad~~l~~~~~~E~~~~~t~s~ts~~~~l~ll 173 (373)
T 2aml_A 97 HLDLVIGISQSGQS-TSTISALERVKKEASVPVVALTSDVTSEIAE--FADITLDIGSGKERVGYVTKGFTATVLTLMLT 173 (373)
T ss_dssp TCCEEEEECSSSCB-HHHHHHHHHHHHHCCCCEEEEESCTTSGGGG--GCSEEEECSCCCCCSSSCSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCC-HHHHHHHHHHHHhCCCcEEEEECCCCChHHH--hcCcceecCCCccccccccccHHHHHHHHHHH
Confidence 88888888876665 4556788889999 99999999987664432 3577888875432 1234443 4456778
Q ss_pred HHHHHHHcCC
Q 006659 612 AYHLTVLRGY 621 (636)
Q Consensus 612 a~~lA~~~G~ 621 (636)
+..++..+|.
T Consensus 174 ~~~l~~~~g~ 183 (373)
T 2aml_A 174 GLHFAYKTVQ 183 (373)
T ss_dssp HHHHHHHTTS
T ss_pred HHHHHHHhCC
Confidence 8888888774
No 74
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=98.07 E-value=8.6e-05 Score=70.40 Aligned_cols=141 Identities=14% Similarity=0.143 Sum_probs=95.7
Q ss_pred HHHHHHHHHhcCCCeEEEEeCCCCHHHHHHHHHHHHH-----hccccccccccc---------ccccccc------cccc
Q 006659 478 QEMKVLAKQLIAEQSLLVFGRGYNYATALEGALKVKE-----VALMHSEGILAG---------EMKHGPL------ALVD 537 (636)
Q Consensus 478 ~~~~~~a~~l~~~~~~~~lG~G~~~~~A~e~alKl~E-----~~~~~a~~~~~~---------Ef~HGp~------~~~~ 537 (636)
+.++++++.+...++++++|.|.++.+|.+++.++.. ..++++...... ++..... ..++
T Consensus 29 ~~~~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~a~~~d~~~~~~~~~~~~~~~~ 108 (196)
T 2yva_A 29 RAAMTLVQSLLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQVRALGH 108 (196)
T ss_dssp HHHHHHHHHHHTTCCEEEEESTHHHHHHHHHHHHHHTCSSSCCCCCCEEESSCCHHHHHHHTTSTTGGGHHHHHHHHHCC
T ss_pred HHHHHHHHHHHcCCEEEEEeCchhhHHHHHHHHHHhccccccCCCCceEeecCchHHHHHHhcCCCHHHHHHHHHHhcCC
Confidence 5567788888889999999999999999999999873 345565554321 2222211 3367
Q ss_pred CCCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCC-CCcceEEEcCCCCcchhhHHHHHHHHHHHHHHH
Q 006659 538 ENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFP-GGSCRVIEVPQVEDCLQPVINIVPLQLLAYHLT 616 (636)
Q Consensus 538 ~~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~v~~q~la~~lA 616 (636)
+++.+|++...|.+ ..+.+.++.++++|.+++.||+......... ...|..+.+|...........+..++.|...+.
T Consensus 109 ~~DvvI~iS~SG~t-~~~i~~~~~ak~~g~~vI~IT~~~~s~la~~~~~ad~~l~~~~~~~~~~~~~~l~~~~~L~~~~~ 187 (196)
T 2yva_A 109 AGDVLLAISTRGNS-RDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIRIPSHRSARIQEMHMLTVNCLCDLID 187 (196)
T ss_dssp TTCEEEEECSSSCC-HHHHHHHHHHHHTTCEEEEEECTTCHHHHTTCCTTSEEEECSCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCC-HHHHHHHHHHHHCCCEEEEEeCCCCchhhhcccCCCEEEEeCCCChhHHHHHHHHHHHHHHHHHH
Confidence 88888888776655 4566788999999999999999765433211 015778888864332222244455677777766
Q ss_pred HHc
Q 006659 617 VLR 619 (636)
Q Consensus 617 ~~~ 619 (636)
...
T Consensus 188 ~~l 190 (196)
T 2yva_A 188 NTL 190 (196)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 75
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*
Probab=98.06 E-value=0.00011 Score=82.24 Aligned_cols=138 Identities=15% Similarity=0.140 Sum_probs=108.6
Q ss_pred chHHHHHHHcCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEeeccchhcccC-CCCCCcEEEEEcCCCCC-HHHHHH
Q 006659 308 GLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIASDLVDRQA-PIYREDTAVFVSQSGET-ADTLQA 385 (636)
Q Consensus 308 ~l~~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~dlvI~iS~SG~t-~e~i~a 385 (636)
.++++++.+...++++++|.|..+.+|..++..+..+..+++..+...|+.+.+. .++++..+|++...|.. ..+++.
T Consensus 453 ~~~~la~~l~~~~~~~~lG~G~~~~~A~e~alKl~E~s~i~ae~~~a~e~~HGp~~lv~~~~~vi~i~~~~~~~~~~~~~ 532 (608)
T 2bpl_A 453 RIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSN 532 (608)
T ss_dssp HHHHHHGGGTTCCEEEEEECGGGHHHHHHHHHHHHHHHCCEEEEEEGGGGGGTGGGGCCTTCEEEEEECSSTTHHHHHHH
T ss_pred HHHHHHHHhhCCCeEEEEecCcCHHHHHHHHHHHHHhccccceeecHHHhhhchHHHcCCCceEEEEECCChhHHHHHHH
Confidence 4677888888999999999999999999999999999999999999999987664 46778888888888877 478899
Q ss_pred HHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCcccccchhhHHHHHHHHHHHHHHHhcCCC
Q 006659 386 LEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTI 450 (636)
Q Consensus 386 l~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~ 450 (636)
++..+++|+++++|++..+..+...+|.+|.++..++. -+....+..+.+|+..++..++
T Consensus 533 ~~e~~~rg~~v~~i~~~~~~~~~~~~~~~i~~p~~~~~-----l~pl~~~v~~Qlla~~~A~~~G 592 (608)
T 2bpl_A 533 IEEVRARGGQLYVFADQDAGFVSSDNMHIIEMPHVEEV-----IAPIFYTVPLQLLAYHVALIKG 592 (608)
T ss_dssp HHHHHHTTCEEEEEEETTSCCCCBTTEEEEEECCCCGG-----GHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCeEEEEECCCchhhcccCCcEEEcCCCcch-----HHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999987446777777777777643221 2223344566677777765444
No 76
>3fkj_A Putative phosphosugar isomerases; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=98.00 E-value=2.1e-05 Score=81.80 Aligned_cols=140 Identities=11% Similarity=0.072 Sum_probs=104.7
Q ss_pred HHHHHHHHHhc---CCCeEEEEeCCCCHHHHHHHHHHHHHhc-cccccccccccccccccccccCCCCeEEEEeCCcchH
Q 006659 478 QEMKVLAKQLI---AEQSLLVFGRGYNYATALEGALKVKEVA-LMHSEGILAGEMKHGPLALVDENLPILVIATRDACFS 553 (636)
Q Consensus 478 ~~~~~~a~~l~---~~~~~~~lG~G~~~~~A~e~alKl~E~~-~~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~~~~~~~ 553 (636)
+.++++++.+. +.++++++|.|.++.+|..++.++.... ++++......||.+.+...+++++.+|++...|.+ .
T Consensus 25 ~~i~~~~~~i~~~~~a~~I~i~G~GtS~~aa~~~~~~l~~~~~g~~~~~~~~~e~~~~~~~~l~~~dlvI~iS~SG~T-~ 103 (347)
T 3fkj_A 25 ENARRIISDILGKQNIERVWFVGCGGSLTGFWPGKYFLDCEASKLAVGYITSNEFVHATPKALGKNSVVILASQQGNT-A 103 (347)
T ss_dssp HHHHHHHHHHHTTSCCCEEEEEESTHHHHTTHHHHHHHHHHCSSCEEEEEEHHHHHHSCCTTCSTTEEEEEEESSSCC-H
T ss_pred HHHHHHHHHHHhhCCCCEEEEEEehHHHHHHHHHHHHHHHHhCCCeEEEeCcHHHHhhCcCCCCCCCEEEEEeCCCCc-H
Confidence 44556666666 7899999999999999999999998887 99999999999999876667888889988877765 4
Q ss_pred HHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcceEEEcCCC---CcchhhHHHHHHHHHHHHHHHHHcC
Q 006659 554 KQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQV---EDCLQPVINIVPLQLLAYHLTVLRG 620 (636)
Q Consensus 554 ~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~~~~~v~~q~la~~lA~~~G 620 (636)
.+.+.++.++++|.+++.||+..+..+.. .+|..+.++.. ++.-..--....+-+++.+++..+|
T Consensus 104 e~l~a~~~ak~~Ga~~iaIT~~~~S~La~--~ad~~l~~~~g~g~~e~~~~t~~~~~l~llal~l~~~~~ 171 (347)
T 3fkj_A 104 ETVAAARVAREKGAATIGLVYQPDTPLCE--YSDYIIEYQWARYPETVDPAQQKAAYSLWLALEILAQTE 171 (347)
T ss_dssp HHHHHHHHHHHHTCEEEEEESSTTCHHHH--TCSEEEECBCCCTTSCCCGGGBHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCcEEEEeCCCCChHHh--hcCeEEEeccCCCCCccchhHHHHHHHHHHHHHHHHHhC
Confidence 45678888899999999999877654421 35777888754 2311011112355667777777776
No 77
>3odp_A Putative tagatose-6-phosphate ketose/aldose isome; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PG4; 2.35A {Clostridium novyi}
Probab=97.98 E-value=3.7e-05 Score=81.09 Aligned_cols=135 Identities=13% Similarity=0.112 Sum_probs=99.5
Q ss_pred hHHHHHHHcCCCeEEEEeechhHHHHHHHHHHHHHhcC--CcEEEeeccchhcccC-CCCCCcEEEEEcCCCCC-H-HHH
Q 006659 309 LKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSD--LPVTMEIASDLVDRQA-PIYREDTAVFVSQSGET-A-DTL 383 (636)
Q Consensus 309 l~~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~--~~~~~~~~~e~~~~~~-~~~~~dlvI~iS~SG~t-~-e~i 383 (636)
++++++. +.++++++|.|.++..|..++-.+..+.. +++....+.||.|.+. .++++..||++...+.. . .-.
T Consensus 222 ~~~~a~~--~~~~~~~lGrG~~~~~A~E~ALKlkE~s~g~i~a~~~~~~e~~HGP~alvd~~~pvi~~~~~d~~t~~~~~ 299 (393)
T 3odp_A 222 MKKIVGE--KFKRTVYLGAANAFGLAKESALKVLELTAGKIATLYDTPLGFRHGPKSIIDDETLIVIFFSNDTYAREYEY 299 (393)
T ss_dssp HHHHHTT--CCSEEEEECCTHHHHHHHHHHHHHHHHTTSSSEEEEECHHHHTTTGGGGCCTTEEEEEECCSSHHHHHHHH
T ss_pred HHHHHhc--CCCeEEEEeCCcCHHHHHHHHHHHHHHhhccchheeecHhhheeccccccCCCceEEEEEcCCchhhHHHH
Confidence 4455544 88999999999999999999999988763 7888889999988764 46788888888755543 1 124
Q ss_pred HHHHHHHHcC--CeEEEEEcCCCCccccccCeeEEcC-----CCCcccccchhhHHHHHHHHHHHHHHHhcCCC
Q 006659 384 QALEYASENG--ALCVGITNTVGSAIARKTHCGVHIN-----AGAEIGVASTKAYTSQIVVMAMLALAIGGDTI 450 (636)
Q Consensus 384 ~al~~ak~~g--~~vi~IT~~~~s~La~~ad~~l~~~-----~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~ 450 (636)
.+++..+.+| +++++||+..+..+...+|..|.++ ..++ .-+....+..+.+|+..++..++
T Consensus 300 ~~~~ev~arg~~~~vi~i~~~~~~~~~~~~~~~i~~p~~~~~~~~~-----~l~pi~~~ip~Qllay~~A~~~G 368 (393)
T 3odp_A 300 DLLKEVYSQNGNHKVLAISEYEDKLIEDNSDYFIAINKEEQEYEDD-----SFLSLDYLLNAQMYAFINSMELG 368 (393)
T ss_dssp HHHHHHHHSSSCCEEEEEEEECCHHHHTTCSEEEEEESSCCCCSSG-----GGGHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCceEEEEEcCCcchhccCCcEEEEeCCccccCCCh-----HHhHHHHHHHHHHHHHHHHHHcC
Confidence 6889999988 9999999977767777889988776 2222 12333345556677777765544
No 78
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=97.93 E-value=0.00014 Score=69.23 Aligned_cols=138 Identities=13% Similarity=0.105 Sum_probs=98.4
Q ss_pred hHHHHHHHHHhcCCCeEEEEeCCCCHHHHHHHHHHHHHhccccccccccccccccccccccCCCCeEEEEeCCcchHHHH
Q 006659 477 DQEMKVLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQ 556 (636)
Q Consensus 477 ~~~~~~~a~~l~~~~~~~~lG~G~~~~~A~e~alKl~E~~~~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~~~~~~~~~~ 556 (636)
.+.++++++.+...++++++|.|.++.+|.+.+.++... ..++... .++ + ...+++++.+|++...|.+ ..+.
T Consensus 34 ~~~l~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~-g~~~~~~--~~~-~--~~~~~~~DvvI~iS~SG~t-~~~i 106 (200)
T 1vim_A 34 LETVGEMIKLIDSARSIFVIGAGRSGYIAKAFAMRLMHL-GYTVYVV--GET-V--TPRITDQDVLVGISGSGET-TSVV 106 (200)
T ss_dssp HHHHHHHHHHHHHSSCEEEECSHHHHHHHHHHHHHHHHT-TCCEEET--TST-T--CCCCCTTCEEEEECSSSCC-HHHH
T ss_pred HHHHHHHHHHHhcCCEEEEEEecHHHHHHHHHHHHHHhc-CCeEEEe--CCc-c--ccCCCCCCEEEEEeCCCCc-HHHH
Confidence 455777888888889999999999999999999998654 3344333 222 1 2346788888888776665 4466
Q ss_pred HHHHHHHhcCCeEEEEecCCCCcCCCCCCcceEEEcCCCCcch--------hhHH------HHHHHHHHHHHHHHHcCCC
Q 006659 557 SVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVEDCL--------QPVI------NIVPLQLLAYHLTVLRGYN 622 (636)
Q Consensus 557 ~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~~~~p~~~~~~--------~~~~------~~v~~q~la~~lA~~~G~~ 622 (636)
++++.++++|.+++.||+.....+.. .+|..+.+|...+.. .|+. .++.++.+...+...+|.+
T Consensus 107 ~~~~~ak~~g~~vI~IT~~~~s~La~--~ad~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~lld~L~~~~~~~~~~~ 184 (200)
T 1vim_A 107 NISKKAKDIGSKLVAVTGKRDSSLAK--MADVVMVVKGKMKQERDEILSQLAPLGTMFELTAMIFLDALVAEIMMQKHLT 184 (200)
T ss_dssp HHHHHHHHHTCEEEEEESCTTSHHHH--HCSEEEECCSSCTTCCHHHHHHHSGGGHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHCCCeEEEEECCCCChHHH--hCCEEEEECCcccccCCcccccccccccHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 78889999999999999977553321 256788888543321 1332 2456799999999988876
Q ss_pred C
Q 006659 623 V 623 (636)
Q Consensus 623 p 623 (636)
+
T Consensus 185 ~ 185 (200)
T 1vim_A 185 E 185 (200)
T ss_dssp H
T ss_pred H
Confidence 4
No 79
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=97.89 E-value=9.9e-05 Score=70.00 Aligned_cols=136 Identities=11% Similarity=0.021 Sum_probs=88.1
Q ss_pred HHHHHHHhcCCCeEEEEeCCCCHHHHHHHHHHHHH-----hccccccccc--cc-------c------ccccccccccCC
Q 006659 480 MKVLAKQLIAEQSLLVFGRGYNYATALEGALKVKE-----VALMHSEGIL--AG-------E------MKHGPLALVDEN 539 (636)
Q Consensus 480 ~~~~a~~l~~~~~~~~lG~G~~~~~A~e~alKl~E-----~~~~~a~~~~--~~-------E------f~HGp~~~~~~~ 539 (636)
++.+++.+...++++++|.|.++.+|..++..+.- ...+++.... .. + |.|.....++++
T Consensus 38 ~~~i~~~i~~~~~I~i~G~G~S~~~A~~~~~~l~~~~~~~~~g~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (198)
T 2xbl_A 38 ADACIASIAQGGKVLLAGNGGSAADAQHIAGEFVSRFAFDRPGLPAVALTTDTSILTAIGNDYGYEKLFSRQVQALGNEG 117 (198)
T ss_dssp HHHHHHHHHTTCCEEEECSTHHHHHHHHHHHHHHSCSSSCCCCCCEEETTCCHHHHHHHHHHHCGGGTTHHHHHHHCCTT
T ss_pred HHHHHHHHHcCCEEEEEeCcHhhHHHHHHHHHHHhhhccCCCCCceEEecCChHHHHHhhccCCHHHHHHHHHHhhCCCC
Confidence 44455555788999999999999999988765432 2334444442 11 1 122233346788
Q ss_pred CCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcceEEEcCCCCcchhhHHHHHHHHHHHHHHHHH
Q 006659 540 LPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVEDCLQPVINIVPLQLLAYHLTVL 618 (636)
Q Consensus 540 ~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~~q~la~~lA~~ 618 (636)
+.+|++...|.+ ..+.+.++.++++|.+++.||+.....+.. .+|..+.+|...+.......+..++.|+..+...
T Consensus 118 d~vI~iS~SG~t-~~~~~~~~~ak~~g~~vI~IT~~~~s~L~~--~ad~~l~~~~~~~~~~~~~~l~i~~~L~~~~~~~ 193 (198)
T 2xbl_A 118 DVLIGYSTSGKS-PNILAAFREAKAKGMTCVGFTGNRGGEMRE--LCDLLLEVPSADTPKIQEGHLVLGHIVCGLVEHS 193 (198)
T ss_dssp CEEEEECSSSCC-HHHHHHHHHHHHTTCEEEEEECSCCCTHHH--HCSEEEECSCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCC-HHHHHHHHHHHHCCCeEEEEECCCCCcHHH--hCCEEEEeCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888877766 556788899999999999999876543321 2467888886544333333444456666655544
No 80
>3i0z_A Putative tagatose-6-phosphate ketose/aldose isome; NP_344614.1, putative putative tagatose-6-phosphate ketose/A isomerase; HET: MSE; 1.70A {Streptococcus pneumoniae TIGR4}
Probab=97.78 E-value=0.00023 Score=74.90 Aligned_cols=136 Identities=12% Similarity=0.153 Sum_probs=95.1
Q ss_pred hHHHHHHHcCCCeEEEEeechhHHHHHHHHHHHHHhcC--CcEEEeeccchhcccC-CCCCCcEEEEEcCCCCCHH--HH
Q 006659 309 LKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSD--LPVTMEIASDLVDRQA-PIYREDTAVFVSQSGETAD--TL 383 (636)
Q Consensus 309 l~~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~--~~~~~~~~~e~~~~~~-~~~~~dlvI~iS~SG~t~e--~i 383 (636)
++++++. ++++++++|.|..+.+|+.++-.+..+.. +++....+.+|.|-+. .++++..||++...+.... ..
T Consensus 222 i~~~a~~--~~~~~~~lGrG~~y~~A~EgALKlkE~s~Gei~a~~~~~~e~kHGP~alid~~~pVi~~~~~d~~~~~~~~ 299 (389)
T 3i0z_A 222 VKELVDL--DFNRVIYLGAGPFFGLAHEAQLKILELTAGQVATMYESPVGFRHGPKSLINDNTVVLVFGTTTDYTRKYDL 299 (389)
T ss_dssp HHHHHTS--CCSEEEEEESTHHHHHHHHHHHHHHHHHTTSSEEEEECHHHHTTTGGGGCCTTEEEEEECCCSHHHHHHHH
T ss_pred HHHHHhc--CCCeEEEEcCCCCHHHHHHHHHHHHHHccCcccceeecHhhccccchhhcCCCceEEEEEcCCchhhHHHH
Confidence 4455544 78999999999999999999999888876 8899999999988764 4688889998876665322 35
Q ss_pred HHHHHHHHc--CCeEEEEEcCCCCccccccCeeEEcCCCCcccccchhhHHHHHHHHHHHHHHHhcCCCC
Q 006659 384 QALEYASEN--GALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTIS 451 (636)
Q Consensus 384 ~al~~ak~~--g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~ 451 (636)
.+++..+.+ |+++++||+. +..+...+|..+..+.... ..-+....+..+.+|+..++..++.
T Consensus 300 ~~~~ev~arg~g~~vi~i~~~-~~~~~~~~~~~i~~~~~~~----~~l~pl~~~vp~QllAy~~A~~rG~ 364 (389)
T 3i0z_A 300 DLVREVAGDQIARRVVLLSDQ-AFGLENVKEVALGCGGVLN----DIYRVFPYIVYAQLFALLTSLKVEN 364 (389)
T ss_dssp HHHHHHHHHTCSSEEEEEESS-CCCCTTCEEEECCCSSCSC----GGGGHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhccCCCeEEEEECC-CcccccCceEEecCCCCcc----hHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 678888887 7999999985 4445544444433321111 1123334456677778777765554
No 81
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=97.77 E-value=0.00049 Score=65.48 Aligned_cols=135 Identities=16% Similarity=0.094 Sum_probs=89.2
Q ss_pred HHHHHHHHhcCCCeEEEEeCCCCHHHHHHHHHHHHH-----hcccccccccccc----ccccc----------c-ccccC
Q 006659 479 EMKVLAKQLIAEQSLLVFGRGYNYATALEGALKVKE-----VALMHSEGILAGE----MKHGP----------L-ALVDE 538 (636)
Q Consensus 479 ~~~~~a~~l~~~~~~~~lG~G~~~~~A~e~alKl~E-----~~~~~a~~~~~~E----f~HGp----------~-~~~~~ 538 (636)
.++.+++.+...++++++|.|.+..+|.+.+.+|.= -..+++....... ..||. + ..+++
T Consensus 35 a~~~i~~al~~~~~I~i~G~G~S~~~A~~~~~~l~~~~~~~r~g~~~~~~~~d~~~~~a~~~d~~~~~~~~~~l~~~~~~ 114 (201)
T 3trj_A 35 AAKAMVSCLENGGKVLVCGNGSSGVIAQHFTSKLLNHFEMERPPLPAIALTGDVATITAVGNHYGFSQIFAKQVAALGNE 114 (201)
T ss_dssp HHHHHHHHHHTTCCEEEEESTHHHHHHHHHHHHHHC-------CCCEEETTSCHHHHHHHHHHTCGGGTTHHHHHHHCCT
T ss_pred HHHHHHHHHHCCCEEEEEeCcHhHHHHHHHHHHhcCccCCCCCCCceEEccCChHHHHHhccCCCHHHHHHHHHHhhCCC
Confidence 344555556778999999999999999999999872 3455555443110 01111 1 12678
Q ss_pred CCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCc---ceEEEcCCCCcchhhHHHHHHHHHHHHHH
Q 006659 539 NLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGS---CRVIEVPQVEDCLQPVINIVPLQLLAYHL 615 (636)
Q Consensus 539 ~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~~~v~~q~la~~l 615 (636)
++.+|++...|.+ ..+.+.++.++++|.+++.|++.....+.. .. |..+.+|...........+..++.|+..+
T Consensus 115 ~Dvvi~iS~SG~t-~~~~~~~~~ak~~g~~vi~iT~~~~s~la~--~a~~~d~~l~~~~~~~~~~~~~~l~i~~~l~~~v 191 (201)
T 3trj_A 115 DDILLVITTSGDS-ENILSAVEEAHDLEMKVIALTGGSGGALQN--MYNTDDIELRVPSDNIANIQENHFLIVHCLCDII 191 (201)
T ss_dssp TCEEEEECSSSCC-HHHHHHHHHHHHTTCEEEEEEETTCCGGGG--TCCTTCEEEEESCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCC-HHHHHHHHHHHHCCCcEEEEECCCCCHHHH--hhccCCEEEEeCCCCchHHHHHHHHHHHHHHHHH
Confidence 8888888776665 446778899999999999999877654432 24 78899996544333334445556665555
Q ss_pred H
Q 006659 616 T 616 (636)
Q Consensus 616 A 616 (636)
.
T Consensus 192 ~ 192 (201)
T 3trj_A 192 D 192 (201)
T ss_dssp H
T ss_pred H
Confidence 4
No 82
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=97.75 E-value=7.7e-05 Score=77.38 Aligned_cols=151 Identities=16% Similarity=0.158 Sum_probs=98.4
Q ss_pred HHHhhhHHHHHHHHhc----hHHHHHHHH--HhcCCCeEEEEeCCCCHHHHHHHHHHHHHhccccccccccccccccccc
Q 006659 461 DGLCDLPNKVREVLKL----DQEMKVLAK--QLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLA 534 (636)
Q Consensus 461 ~~l~~l~~~~~~~~~~----~~~~~~~a~--~l~~~~~~~~lG~G~~~~~A~e~alKl~E~~~~~a~~~~~~Ef~HGp~~ 534 (636)
+++.+-|+.++++++. ... .++++ .+...++++++|.|.++.+|..++.++....++++......||.+.+.
T Consensus 18 keI~eqP~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~I~i~G~G~S~~~a~~~~~~l~~~~g~~v~~~~~~~~~~~~~- 95 (342)
T 1j5x_A 18 KEITDQKNELKKFFENFVLNLEK-TEIFSEIQKNLTDEVLFVGCGSSYNLALTISYYFERVLKIRTKAIPAGEVAFQKI- 95 (342)
T ss_dssp HHHHHHHHTHHHHHHHTGGGTTC-------C----CCEEEEEESTHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHTTCS-
T ss_pred HHHHHHHHHHHHHHHhhhcccch-HHHHHHHHhCCCCEEEEEEchHHHHHHHHHHHHHHHhhCCeEEEECchHHHhcCc-
Confidence 3445556666666643 112 44444 356778999999999999999999999887888998887778766544
Q ss_pred cccCC-CCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcceEEEcCCCCc-c---hhhHH-HHHHH
Q 006659 535 LVDEN-LPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVED-C---LQPVI-NIVPL 608 (636)
Q Consensus 535 ~~~~~-~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~~~~p~~~~-~---~~~~~-~~v~~ 608 (636)
.++++ +.+|++...|.+ ..+.+.++.++++|.+++.||+..+..+.. .+|..+.+|. ++ . ...+. .++.+
T Consensus 96 ~~~~~~dlvI~iS~SG~T-~e~l~a~~~ak~~Ga~vIaIT~~~~S~La~--~ad~~l~~~~-~e~~~a~t~s~~~~l~~l 171 (342)
T 1j5x_A 96 PDLEERGLAFLFSRTGNT-TEVLLANDVLKKRNHRTIGITIEEESRLAK--ESDLPLVFPV-REEAIVMTKSFSMILLSL 171 (342)
T ss_dssp CCCCSSEEEEEECSSSCC-HHHHHHHHHHHHTTEEEEEEESCTTSHHHH--HSSEEEECCC-CCCSSSCCHHHHHHHHHH
T ss_pred ccCCCCeEEEEEcCCCCC-HHHHHHHHHHHHCCCCEEEEECCCCCHHHH--hcCEEEEcCC-CcceecchHHHHHHHHHH
Confidence 35666 777777766655 456678888999999999999877654321 2567788875 33 1 23333 33345
Q ss_pred HHHHHHHHH
Q 006659 609 QLLAYHLTV 617 (636)
Q Consensus 609 q~la~~lA~ 617 (636)
.+++..++.
T Consensus 172 ~~L~~~l~~ 180 (342)
T 1j5x_A 172 MFLADKIAG 180 (342)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhh
Confidence 666666653
No 83
>3ff1_A Glucose-6-phosphate isomerase; alpha beta, rossmann fold, gluconeogenesis, glycolysis, structural genomics; HET: G6Q; 1.65A {Staphylococcus aureus subsp} SCOP: c.80.1.2 PDB: 3ifs_A*
Probab=97.65 E-value=0.00018 Score=76.02 Aligned_cols=200 Identities=16% Similarity=0.113 Sum_probs=114.0
Q ss_pred ccchHHHHHHHcC-CCeEEEEeechhHHHHHHHHHHHHHhc-----CCcEEEe----eccchhcccCCC-CCCcEEEEEc
Q 006659 306 LGGLKDHLKTIRR-SRRIVFIGCGTSYNAALAARPILEELS-----DLPVTME----IASDLVDRQAPI-YREDTAVFVS 374 (636)
Q Consensus 306 ~~~l~~~~~~l~~-~~~I~i~G~G~S~~aa~~~~~~~~~~~-----~~~~~~~----~~~e~~~~~~~~-~~~dlvI~iS 374 (636)
.+.++++++.+++ .+.|+++|+|+|+-.+..+...+.... +..+... ++..+......+ .+++++|++|
T Consensus 62 l~~i~~~a~~vr~~~~~vV~IGIGGS~LGp~~v~eaL~~~~~~~~~~~~~~fv~dnvDp~~i~~~l~~l~~~~Tl~iViS 141 (446)
T 3ff1_A 62 FSRIVEASKRIKENSDVLVVIGIGGSYLGARAAIEMLTSSFRNSNEYPEIVFVGNHLSSTYTKELVDYLADKDFSVNVIS 141 (446)
T ss_dssp HHHHHHHHHHHHHHCSEEEEECCGGGTHHHHHHHHHHSCSSCCCCSSCEEEEESSSCCHHHHHHHHHHGGGCCEEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEEEecchhHHHHHHHHHHHcchhhcccCCceEEEEecCCCHHHHHHHHHhcCccceEEEEEc
Confidence 3456777777763 788999999999988888777776532 2333222 222222222223 3688999999
Q ss_pred CCCCCHHHHHHHHHHHH----c-C-----CeEEEEEcCCCCccccccCe----eEEcCCCCcccccchhhHHHHHHHHHH
Q 006659 375 QSGETADTLQALEYASE----N-G-----ALCVGITNTVGSAIARKTHC----GVHINAGAEIGVASTKAYTSQIVVMAM 440 (636)
Q Consensus 375 ~SG~t~e~i~al~~ak~----~-g-----~~vi~IT~~~~s~La~~ad~----~l~~~~~~e~~~~~t~s~~~~~~~l~l 440 (636)
.||.|.||+..++.+|+ + | ..+|+||+...++|.+.|+- ++.++.. +...-|..+.+-+
T Consensus 142 KSgtT~ET~~n~~~~r~~l~~~~g~~~~~~h~vavT~~~~g~L~~~a~~~G~~~F~~~d~----VGGRySv~SaVGL--- 214 (446)
T 3ff1_A 142 KSGTTTEPAVAFRLFKQLVEERYGKEEAQKRIFATTDKEKGALKQLATNEGYETFIVPDD----VGGRYSVLTAVGL--- 214 (446)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHCHHHHHHHEEEEECSSCSHHHHHHHHHTCEEEECCTT----CCGGGCTTSHHHH---
T ss_pred CCCCCHHHHHHHHHHHHHHHHhcCcccccceEEEEeCCCcchhhhHHHHcCCeEEEeccc----cccchhhhhhhHH---
Confidence 99999999999988774 2 4 36899999877888777652 4444331 1122222222222
Q ss_pred HHHHHhcCCCCcHHHHHHHHHHHhhhHHHHHHH-HhchHHHHHHH--H-Hh--cCCCeEEEEeCC-CCHHHHHHHHHHHH
Q 006659 441 LALAIGGDTISTQARREAIIDGLCDLPNKVREV-LKLDQEMKVLA--K-QL--IAEQSLLVFGRG-YNYATALEGALKVK 513 (636)
Q Consensus 441 L~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~-~~~~~~~~~~a--~-~l--~~~~~~~~lG~G-~~~~~A~e~alKl~ 513 (636)
+.+.++.. .++++++..+.+.+.+... ++ ++..-.+| . .+ .+.+...++... .....+....+-.+
T Consensus 215 lp~a~~G~------d~~~lL~GA~~md~~f~~~~~~-~N~~~~~Al~~~~~~~~G~~~~~l~pY~~~L~~f~~w~qQL~~ 287 (446)
T 3ff1_A 215 LPIATAGI------NIEAMMIGAAKAREELSSDKLE-ENIAYQYATIRNILYAKGYTTEMLINYEPSMQYFNEWWKQLFG 287 (446)
T ss_dssp HHHHHTTC------CHHHHHHHHHHHHHHTCCCCGG-GCHHHHHHHHHHHHHHTTCCEEEEEESSGGGHHHHHHHHHHHH
T ss_pred HHHHhcCc------cHHHHHHHHHHHHHHhcCCCcc-cCHHHHHHHHHHHHHHCCCCEEEEEeCcHhHHHHHHHHHHhhc
Confidence 22223222 1344444443333332211 11 22222222 1 11 455655665544 44667777888899
Q ss_pred Hhcccc
Q 006659 514 EVALMH 519 (636)
Q Consensus 514 E~~~~~ 519 (636)
|..+..
T Consensus 288 ES~GK~ 293 (446)
T 3ff1_A 288 ESEGKD 293 (446)
T ss_dssp HHHCCT
T ss_pred cccCCC
Confidence 999765
No 84
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=97.63 E-value=0.0006 Score=66.94 Aligned_cols=143 Identities=15% Similarity=0.089 Sum_probs=89.0
Q ss_pred HHHHHHHhcCCCeEEEEeCCCCHHHHHHHHHHHHHhccccccccc------------ccccccc------ccccccCCCC
Q 006659 480 MKVLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGIL------------AGEMKHG------PLALVDENLP 541 (636)
Q Consensus 480 ~~~~a~~l~~~~~~~~lG~G~~~~~A~e~alKl~E~~~~~a~~~~------------~~Ef~HG------p~~~~~~~~~ 541 (636)
++.+++.+...++++++|.|.++.+|.+++.++.-....++.... ..|..|| ....+++++.
T Consensus 32 ~~~l~~~i~~~~~I~i~G~G~S~~~A~~~~~~l~~l~~~~~~~~~~~~l~~~~~~~~~~e~~~g~~~~~~~~~~~~~~Dv 111 (243)
T 3cvj_A 32 AHLVSEAVMNGGRFYVFGSGHSHMIAEEIYNRAGGLALVTAILPPELMLHERPNKSTYLERIEGLSKSYLKLHQVTNKDV 111 (243)
T ss_dssp HHHHHHHHHTTCCEEEEESGGGHHHHHHTSSSTTCBTTEEECCCGGGSSSSSTTHHHHHTTCTTHHHHHHHHTTCCTTCE
T ss_pred HHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhccccccCcccchhhhccCCchhhhhhhhcccHHHHHHHHhcCCCCCE
Confidence 444555667789999999999999999888776543322221111 1244454 2233678888
Q ss_pred eEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCC-----------cCCCCCCcceEEEcCCCC--------------
Q 006659 542 ILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDA-----------ASIFPGGSCRVIEVPQVE-------------- 596 (636)
Q Consensus 542 vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~-----------~~~~~~~~~~~~~~p~~~-------------- 596 (636)
+|++...|.+ ..+.++++.++++|.+++.||+.... .+. ..+|..+.++...
T Consensus 112 ~I~iS~SG~t-~~~i~~~~~Ak~~G~~vI~IT~~~~s~~~~~~~~~g~~La--~~aD~~l~~~~~~~e~~~~~~~~~~~~ 188 (243)
T 3cvj_A 112 IMIISNSGRN-TVPVEMAIESRNIGAKVIAMTSMKHSQKVTSRHKSGKKLY--EYADVVLDNGAPVGDAGFQIANSEIYS 188 (243)
T ss_dssp EEEECSSCCS-HHHHHHHHHHHHHTCEEEEEECHHHHHHSCCCSTTSCCGG--GGCSEEEECCCCTTSCCEECSSSSCEE
T ss_pred EEEEeCCCCC-HHHHHHHHHHHHCCCEEEEEeCCcccccccccCCCcCcHH--HhCCEEEECCCCcccceeeccCccccC
Confidence 8888776655 55667889999999999999986322 221 1256777665321
Q ss_pred cchhhHHHHHHHHHHHHHHHH---HcCCCCCC
Q 006659 597 DCLQPVINIVPLQLLAYHLTV---LRGYNVDQ 625 (636)
Q Consensus 597 ~~~~~~~~~v~~q~la~~lA~---~~G~~pd~ 625 (636)
...+.+..+..++.|...++. .+|++|..
T Consensus 189 ~~~s~~~~~~il~~L~~~~~~~~~~~~~~~~~ 220 (243)
T 3cvj_A 189 GATSDSIGCFLAQALIVETLHLLVQQGFEPPV 220 (243)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCB
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCe
Confidence 123334455556666554444 46775543
No 85
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=97.51 E-value=0.00093 Score=62.60 Aligned_cols=116 Identities=15% Similarity=0.097 Sum_probs=76.0
Q ss_pred HHHHHHHHhcCCCeEEEEeCCCCHHHHHHHHHHHHH-----hccccccccc--cccc-------------cccccccccC
Q 006659 479 EMKVLAKQLIAEQSLLVFGRGYNYATALEGALKVKE-----VALMHSEGIL--AGEM-------------KHGPLALVDE 538 (636)
Q Consensus 479 ~~~~~a~~l~~~~~~~~lG~G~~~~~A~e~alKl~E-----~~~~~a~~~~--~~Ef-------------~HGp~~~~~~ 538 (636)
.++.+++.+...++++++|.|.++.+|...+..+.- ...+++.... ..++ .+--...+++
T Consensus 31 ~~~~i~~~l~~~~~I~i~G~G~S~~~a~~~~~~l~~~~~~~~~g~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (188)
T 1tk9_A 31 VGELLCECLKKGGKILICGNGGSAADAQHFAAELSGRYKKERKALAGIALTTDTSALSAIGNDYGFEFVFSRQVEALGNE 110 (188)
T ss_dssp HHHHHHHHHHTTCCEEEEESTHHHHHHHHHHHHHHSCSSSCCCCCCEEESSCCHHHHHHHHHHTCGGGHHHHHHHHHCCT
T ss_pred HHHHHHHHHHCCCEEEEEeCcHhHHHHHHHHHHHhhhhccCCCCCceEeccCCchhHhhhhcCCCHHHHHHHHHHHhCCC
Confidence 344555567778999999999999999988875532 2233433331 1110 0001123678
Q ss_pred CCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcceEEEcCCCCc
Q 006659 539 NLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVED 597 (636)
Q Consensus 539 ~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~~~~p~~~~ 597 (636)
++.+|++...|.+ ..+.+.++.++++|.+++.||+.....+.. .+|..+.+|..+.
T Consensus 111 ~Dvvi~iS~sG~t-~~~~~~~~~ak~~g~~vi~iT~~~~s~L~~--~ad~~l~~~~~~~ 166 (188)
T 1tk9_A 111 KDVLIGISTSGKS-PNVLEALKKAKELNMLCLGLSGKGGGMMNK--LCDHNLVVPSDDT 166 (188)
T ss_dssp TCEEEEECSSSCC-HHHHHHHHHHHHTTCEEEEEEEGGGTTHHH--HCSEEEEESCSCH
T ss_pred CCEEEEEeCCCCC-HHHHHHHHHHHHCCCEEEEEeCCCCcchHH--cCCEEEEeCCCCH
Confidence 8888888877765 456788899999999999999876543321 2567888886543
No 86
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=97.50 E-value=0.0016 Score=66.29 Aligned_cols=141 Identities=13% Similarity=0.080 Sum_probs=89.5
Q ss_pred hHHHHHHHHHhcCCCeEEEEeCCCCHHHHHH-HHHHHHHhcc-------ccccc-------cc-cccccc---ccc--cc
Q 006659 477 DQEMKVLAKQLIAEQSLLVFGRGYNYATALE-GALKVKEVAL-------MHSEG-------IL-AGEMKH---GPL--AL 535 (636)
Q Consensus 477 ~~~~~~~a~~l~~~~~~~~lG~G~~~~~A~e-~alKl~E~~~-------~~a~~-------~~-~~Ef~H---Gp~--~~ 535 (636)
++.++++++.+...++++++|.|.++.+|.. +.-++.-... +.+.+ .+ .+++.| ..+ ..
T Consensus 58 ~~~i~~i~~~l~~a~rI~~~G~G~S~~lA~~~a~~~~~~~g~~~~~~~~l~~~g~~a~~~a~e~~ed~~~~~~~~l~~~~ 137 (306)
T 1nri_A 58 SLAVEQIVQAFQQGGRLIYIGAGTSGRLGVLDASECPPTFGVSTEMVKGIIAGGECAIRHPVEGAEDNTKAVLNDLQSIH 137 (306)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESHHHHHHHHHHHHHHHHHHCCCTTSEEEEETTCTHHHHSCCTTGGGCTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCEEEEEeccHhHHHHHHHHHhcccccCCCHHHHHHHHhcchHHHhhhhhcccCcHHHHHHHHHhcC
Confidence 3556777888888899999999999999953 4333322211 01111 11 123332 222 13
Q ss_pred ccCCCCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCCcCCCCCCcceEEEcCCCCcc------h-hhHHHHHHH
Q 006659 536 VDENLPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASIFPGGSCRVIEVPQVEDC------L-QPVINIVPL 608 (636)
Q Consensus 536 ~~~~~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~~~~~~~~~~~~~~~p~~~~~------~-~~~~~~v~~ 608 (636)
++++..+|+|...|.+ ..+.+.++.++++|.+++.|++.....+.. .+|..+.+|..++. + +.......+
T Consensus 138 l~~~DvvI~IS~SG~T-~~vi~al~~Ak~~Ga~~IaIT~~~~S~La~--~AD~~I~~~~g~E~~~~st~~~s~ta~~~vl 214 (306)
T 1nri_A 138 FSKNDVLVGIAASGRT-PYVIAGLQYAKSLGALTISIASNPKSEMAE--IADIAIETIVGPEILTGSSRLKSGTAQKMVL 214 (306)
T ss_dssp CCTTSEEEEECTTSCC-HHHHHHHHHHHHHTCEEEEEESSTTCHHHH--HSSEEEECCCCSCSSTTCTTTHHHHHHHHHH
T ss_pred CCCCCEEEEEECCCCC-HHHHHHHHHHHHCCCEEEEEECCCCChHHH--hCCEEEEcCCCCccccCcccchhHHHHHHHH
Confidence 6788888888877665 556788899999999999999987654321 24677777743332 1 222344567
Q ss_pred HHHHHHHHHHcC
Q 006659 609 QLLAYHLTVLRG 620 (636)
Q Consensus 609 q~la~~lA~~~G 620 (636)
++|+..+....|
T Consensus 215 ~~L~~~~~~~~g 226 (306)
T 1nri_A 215 NMLTTASMILLG 226 (306)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcc
Confidence 888888888877
No 87
>3c3j_A Putative tagatose-6-phosphate ketose/aldose isome; tagatose-6-phosphate ketose/aldose isomerase, structural GEN PSI, MCSG; 1.80A {Escherichia coli}
Probab=97.37 E-value=0.00047 Score=72.62 Aligned_cols=131 Identities=9% Similarity=0.077 Sum_probs=92.1
Q ss_pred HHHhhhHHHHHHHHhc-h---HHHHHHH-HHhcCC-CeEEEEeCCCCHHHHHHHHHHHHHhccccccccccccccccccc
Q 006659 461 DGLCDLPNKVREVLKL-D---QEMKVLA-KQLIAE-QSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLA 534 (636)
Q Consensus 461 ~~l~~l~~~~~~~~~~-~---~~~~~~a-~~l~~~-~~~~~lG~G~~~~~A~e~alKl~E~~~~~a~~~~~~Ef~HGp~~ 534 (636)
+++.+-|+.+++.++. . ....++. +.+... ++++++|.|.++.+|..++.++....++++..+...++.+.++.
T Consensus 18 kEI~eqP~~~~~~l~~~~~~~~~l~~~~~~~l~~~~~~I~i~G~GtS~~~a~~~~~~l~~~~g~~v~~~~~~~~~~~~~~ 97 (384)
T 3c3j_A 18 EEIRHQPRAWIRSLTNIDALRSALNNFLEPLLRKENLRIILTGAGTSAFIGDIIAPWLASHTGKNFSAVPTTDLVTNPMD 97 (384)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCEEEEECSTHHHHHHHHHHHHHHHHHCSEEEECCHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHhcCCCEEEEEEehHHHHHHHHHHHHHHHHhCCcEEEeccHHHHhChhh
Confidence 3445556666555542 1 2233343 235666 89999999999999999999998888888888777677777766
Q ss_pred cc--cCCCCeEEEEeCCcchHHHHHHHHHHHhc--CCeEEEEecCCCCcCCCCCCcc-----eEEEcCC
Q 006659 535 LV--DENLPILVIATRDACFSKQQSVIQQLHAR--KGRLIVMCSKGDAASIFPGGSC-----RVIEVPQ 594 (636)
Q Consensus 535 ~~--~~~~~vi~l~~~~~~~~~~~~~~~~~~~~--g~~v~vi~~~~~~~~~~~~~~~-----~~~~~p~ 594 (636)
.. ++++.+|++...|.+ ..+.+.++.++++ |.+++.|++..+..+.. .+| ..+.+|.
T Consensus 98 ~~~~~~~dlvI~iS~SG~T-~e~l~a~~~ak~~~~ga~~iaIT~~~~S~La~--~ad~~~~~~~l~~~~ 163 (384)
T 3c3j_A 98 YLNPAHPLLLISFGRSGNS-PESVAAVELANQFVPECYHLPITCNEAGALYQ--NAINSDNAFALLMPA 163 (384)
T ss_dssp HCCTTSCEEEEEEESSSCC-HHHHHHHHHHHHHCSSEEEEEEESCTTSHHHH--HHHTCTTBCCEECCG
T ss_pred hhCCCCCeEEEEEeCCcCC-HHHHHHHHHHHhhCCCCCEEEEECCCCCHHHh--hhccCCcEEEEEecC
Confidence 55 577888888777765 4456778888888 99999999976553321 134 6677773
No 88
>3ljk_A Glucose-6-phosphate isomerase; structural genomics, IDP02733, cytoplasm, gluconeogenesis, glycolysis; HET: MSE MES; 1.48A {Francisella tularensis} PDB: 3m5p_A* 3q7i_A* 3q88_A*
Probab=96.54 E-value=0.0029 Score=68.29 Aligned_cols=188 Identities=18% Similarity=0.078 Sum_probs=102.3
Q ss_pred CCeEEEEeechhHHHHHHHHHHHHHhc--CCcEEEeeccc---hhcccCCCC-CCcEEEEEcCCCCCHHHHHHHHHHHH-
Q 006659 319 SRRIVFIGCGTSYNAALAARPILEELS--DLPVTMEIASD---LVDRQAPIY-REDTAVFVSQSGETADTLQALEYASE- 391 (636)
Q Consensus 319 ~~~I~i~G~G~S~~aa~~~~~~~~~~~--~~~~~~~~~~e---~~~~~~~~~-~~dlvI~iS~SG~t~e~i~al~~ak~- 391 (636)
.+.|+++|+|+|+-....+...+.... +..+...+..+ +......++ +.+++|++|.||.|.||+..++.+|+
T Consensus 140 i~~VV~IGIGGS~LGp~~v~eaL~~~~~~~~~~~Fv~NvDp~~l~~~L~~l~~~~TLfiViSKSgtT~ET~~n~~~ar~w 219 (543)
T 3ljk_A 140 ITDIVNIGIGGSDLGPKMVVRALQPYHCTDLKVHFVSNVDADSLLQALHVVDPETTLLIIASKSFSTEETLLNSISAREW 219 (543)
T ss_dssp CCEEEEECCGGGTHHHHHHHHHTGGGCCSSCEEEEECCSSHHHHHHHHTTCCGGGEEEEEECTTSCCHHHHHHHHHHHHH
T ss_pred eeeEEEEecccchHHHHHHHHHhhhhccCCCeEEEEeCCCHHHHHHHHhhCCcccEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 589999999999988888877776543 34444443222 222223343 57899999999999999998887763
Q ss_pred ---c-C------CeEEEEEcCCCCcccccc---CeeEEcCCCCcccccchhhHHHHHHHHHHHHHHHhcCCCCcHHHHHH
Q 006659 392 ---N-G------ALCVGITNTVGSAIARKT---HCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISTQARREA 458 (636)
Q Consensus 392 ---~-g------~~vi~IT~~~~s~La~~a---d~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~~~~~~~~ 458 (636)
+ | -..|+||.+. +.+.+.. +.++.++..- ...-|..+.+-+. +++.++ .+.+++
T Consensus 220 l~~~~g~~~~~~khfvAvTt~~-~~a~~~Gi~~~~~F~~~d~V----GGRySv~SaVGL~--~a~~~G------~d~~~~ 286 (543)
T 3ljk_A 220 LLDHYEDEKAVANHFVAISSKL-DKVKEFGIDLEHCYKMWDWV----GGRYSLWSSIGMS--IAFAIG------YDNFEK 286 (543)
T ss_dssp HHHHHCCGGGGGGTEEEECSCH-HHHHHHTCCGGGEECCCTTS----CGGGCTTSGGGHH--HHHHHC------HHHHHH
T ss_pred HHHhcCCcccccCeEEEEcCCh-HHHHHcCCCccCEEECCCCC----CCcCcCcchhHHH--HHHHcC------cHHHHH
Confidence 2 2 3588898763 3332221 1235443311 1122222222211 112111 122344
Q ss_pred HHHHHhhhHHHHHHH-HhchH-HHH----HHHHHhcCCCeEEEEeCCCC-HHHHHHHHHHHHHhcccc
Q 006659 459 IIDGLCDLPNKVREV-LKLDQ-EMK----VLAKQLIAEQSLLVFGRGYN-YATALEGALKVKEVALMH 519 (636)
Q Consensus 459 ~~~~l~~l~~~~~~~-~~~~~-~~~----~~a~~l~~~~~~~~lG~G~~-~~~A~e~alKl~E~~~~~ 519 (636)
+++....+.+.+... ++.+. ..- -+...+.+.+...++..... ...+....+-.+|..+..
T Consensus 287 lL~GA~~md~~f~~~~l~~N~p~llAl~~~~~~~~~G~~~~~llpY~~~L~~f~~w~qQL~mES~GK~ 354 (543)
T 3ljk_A 287 LLAGAYSVDKHFKETEFSKNIPVIMALLASYYSCTYNSQSQALLPYDERLCYFVDYLQQADMESNGKS 354 (543)
T ss_dssp HHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHHTCCCEEEEEECSGGGTTHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHhhcCChhhCHHHHHHHHHHHHHhcCCCCeEEEEEChHHHHHHHHHHHHHHHhccCCc
Confidence 444444444443321 11111 111 12233457777777765543 566677778899999864
No 89
>4em6_D Glucose-6-phosphate isomerase; GPI, phosphoglucose isomerase phosphohexose isomerase, PHI, ssgcid; 1.90A {Brucella melitensis BV}
Probab=96.46 E-value=0.0029 Score=68.41 Aligned_cols=188 Identities=15% Similarity=0.081 Sum_probs=101.3
Q ss_pred CCeEEEEeechhHHHHHHHHHHHHHhc-CCcEEEeeccc---hhcccCCCC-CCcEEEEEcCCCCCHHHHHHHHHHHH--
Q 006659 319 SRRIVFIGCGTSYNAALAARPILEELS-DLPVTMEIASD---LVDRQAPIY-REDTAVFVSQSGETADTLQALEYASE-- 391 (636)
Q Consensus 319 ~~~I~i~G~G~S~~aa~~~~~~~~~~~-~~~~~~~~~~e---~~~~~~~~~-~~dlvI~iS~SG~t~e~i~al~~ak~-- 391 (636)
.+.|+++|+|+|+-....+...+.... +..+...+..+ +......++ +.+++|++|.||.|.||+..++.+|+
T Consensus 150 i~~vV~IGIGGS~LGp~~v~eAL~~~~~~~~~~Fv~NvDp~~l~~~L~~l~~~~TLfiViSKSgtT~ET~~n~~~ar~wl 229 (553)
T 4em6_D 150 ITDIVNIGIGGSDLGPVMATLALAPYHDEPRAHFVSNIDGAHIADTLSPLDPASTLIIVASKTFTTIETMTNAQTARKWV 229 (553)
T ss_dssp CCEEEEECCGGGTHHHHHHHHHTGGGCCSSEEEEECCSSHHHHHHHHTTSCGGGEEEEEECSSSCCHHHHHHHHHHHHHH
T ss_pred eeeEEEEecccccHHHHHHHHHHhccCCCCeEEEEeCCCHHHHHHHHhhCCcCcEEEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 689999999999988888877666542 24444433222 222223344 57899999999999999988777663
Q ss_pred --c------CCeEEEEEcCCCCcccccc---CeeEEcCCCCcccccchhhHHHHHHHHHHHHHHHhcCCCCcHHHHHHHH
Q 006659 392 --N------GALCVGITNTVGSAIARKT---HCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISTQARREAII 460 (636)
Q Consensus 392 --~------g~~vi~IT~~~~s~La~~a---d~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~~~~~~~~~~ 460 (636)
+ .-.+|+||.+. +.+.+.. +.++.++..- ...-|..+.+-+. +++.++ .+.+++++
T Consensus 230 ~~~~~~~~~~kh~vAvTt~~-~~a~~~Gi~~~~~F~~~d~V----GGRySv~SaVGL~--~a~~~G------~d~~~~lL 296 (553)
T 4em6_D 230 ADTLGEAAVGAHFAAVSTAL-DKVAAFGIPEDRVFGFWDWV----GGRYSVWSAIGLP--VMIAVG------PDNFRKFL 296 (553)
T ss_dssp HHHHCGGGGGGTEEEECSCH-HHHHHHTCCGGGEECCCTTS----CGGGCTTSGGGHH--HHHHHC------HHHHHHHH
T ss_pred HHhcCcccccCeEEEEcCCc-HHHHHcCCccccEEecCCCc----CccccccchhhHH--HHHHcC------cHHHHHHH
Confidence 1 24688998753 3333221 1235443321 1122222222211 122221 12244454
Q ss_pred HHHhhhHHHHHHH-Hhch-HHHHH----HHHHhcCCCeEEEEeCCC-CHHHHHHHHHHHHHhcccc
Q 006659 461 DGLCDLPNKVREV-LKLD-QEMKV----LAKQLIAEQSLLVFGRGY-NYATALEGALKVKEVALMH 519 (636)
Q Consensus 461 ~~l~~l~~~~~~~-~~~~-~~~~~----~a~~l~~~~~~~~lG~G~-~~~~A~e~alKl~E~~~~~ 519 (636)
+....+.+.+... ++.+ +..-. +...+.+.+...++.... ....+....+-.+|..+..
T Consensus 297 ~GA~~md~~f~~~~l~~N~p~llAl~~~~~~~~~G~~~~~llpY~~~L~~f~~w~qQL~mES~GK~ 362 (553)
T 4em6_D 297 AGAHAMDVHFRDAPLEKNLPVMLGLIGYWHRAICGYGSRAIIPYDQRLSRLPAYLQQLDMESNGKS 362 (553)
T ss_dssp HHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHTSCCCEEEEEEECGGGTTHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHhhcCChhhCHHHHHHHHHHHHHhcCCCCeEEEEEChHHHHHHHHHHHHHHHhccCCc
Confidence 4444444443321 1111 11111 223335667666666543 4566777778899999864
No 90
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=95.83 E-value=0.073 Score=53.72 Aligned_cols=80 Identities=9% Similarity=-0.042 Sum_probs=64.9
Q ss_pred CCCeEEEEeCCCCHHHHHHHHHHHHHhc-cccccccccccccccccccccCCCCeEEEEeCCcchHHHHHHHHHHHhcCC
Q 006659 489 AEQSLLVFGRGYNYATALEGALKVKEVA-LMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQSVIQQLHARKG 567 (636)
Q Consensus 489 ~~~~~~~lG~G~~~~~A~e~alKl~E~~-~~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~~~~~~~~~~~~~~~~~~~g~ 567 (636)
..++++++|.|.++.+|..++-.+.... .+++......++ .++++.+|++..+|.+ ..+.+.++.++++|.
T Consensus 36 ~~~~I~i~G~G~S~~~a~~~~~~l~~~~~~~~~~~~~~~~~-------~~~~dlvI~iS~SG~T-~e~~~a~~~ak~~g~ 107 (302)
T 1tzb_A 36 AMPRLYISGMGGSGVVADLIRDFSLTWNWEVEVIAVKDYFL-------KARDGLLIAVSYSGNT-IETLYTVEYAKRRRI 107 (302)
T ss_dssp CCSEEEEECCHHHHHHHHHHHHHHHHTTCSSEEEEECSSCC-------CCSSSEEEEECSSSCC-HHHHHHHHHHHHTTC
T ss_pred CCCEEEEEEecHHHHHHHHHHHHHHhhcCCceEEEeCCcCC-------CCCCCEEEEEeCCCCC-HHHHHHHHHHHHCCC
Confidence 5789999999999999999988887666 777777666555 2778888888776665 455678888999999
Q ss_pred eEEEEecCC
Q 006659 568 RLIVMCSKG 576 (636)
Q Consensus 568 ~v~vi~~~~ 576 (636)
+++.|++..
T Consensus 108 ~~iaIT~~~ 116 (302)
T 1tzb_A 108 PAVAITTGG 116 (302)
T ss_dssp CEEEEESST
T ss_pred eEEEECCCc
Confidence 999999977
No 91
>3ujh_A Glucose-6-phosphate isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: G6Q; 2.10A {Toxoplasma gondii}
Probab=95.69 E-value=0.012 Score=63.77 Aligned_cols=189 Identities=14% Similarity=0.104 Sum_probs=100.2
Q ss_pred CCeEEEEeechhHHHHHHHHHHHHHh-------cCCcEEEeeccc---hhcccCCCC-CCcEEEEEcCCCCCHHHHHHHH
Q 006659 319 SRRIVFIGCGTSYNAALAARPILEEL-------SDLPVTMEIASD---LVDRQAPIY-REDTAVFVSQSGETADTLQALE 387 (636)
Q Consensus 319 ~~~I~i~G~G~S~~aa~~~~~~~~~~-------~~~~~~~~~~~e---~~~~~~~~~-~~dlvI~iS~SG~t~e~i~al~ 387 (636)
.+.|+.+|+|+|+-....+...+... .+..+...+..+ +......++ +++++|++|.||.|.||+..++
T Consensus 151 i~~vV~IGIGGS~LGp~~v~eAL~~~~~~~~~~~~~~~~FvsNvDp~~l~~~L~~L~~~~TlfiViSKSgtT~ET~~n~~ 230 (567)
T 3ujh_A 151 LVNVISIGIGGSYLGTEFVHLALAAEGYAAEKAHGRQIHFLANVDPVDVWLAERGFDPEETLVVVISKTFTTAETMMNAR 230 (567)
T ss_dssp CCEEEEECCGGGTHHHHHHHHHHHTCHHHHHHTTTCEEEEECCSSHHHHHHHHTTCCGGGEEEEEECSSSCCHHHHHHHH
T ss_pred ceeEEEEecccchHHHHHHHHHhccccccccccCCCeEEEEeCCCHHHHHHHHhhCCcccEEEEEEeCCCCCHHHHHHHH
Confidence 58999999999998888877766543 244444443222 222223344 5789999999999999999888
Q ss_pred HHHH----c---C-----CeEEEEEcCCCCccccc---cCeeEEcCCCCcccccchhhHHHHHHHHHHHHHHHhcCCCCc
Q 006659 388 YASE----N---G-----ALCVGITNTVGSAIARK---THCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTIST 452 (636)
Q Consensus 388 ~ak~----~---g-----~~vi~IT~~~~s~La~~---ad~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~~ 452 (636)
.+|+ + | -.+|+||.+. ....+. .+..+.++. . +...-|..+.+-++- +++.++
T Consensus 231 ~~r~wl~~~~~~g~~~~~kh~vAvT~~~-~~~~~fgi~~~n~F~~~D---~-VGGRySvlSaVGLLP-iAla~G------ 298 (567)
T 3ujh_A 231 SVRDWYLHHYKGDERALGAHFCAVSTNL-DGTSKFGIQSDRVFGFWD---W-VGGRYSVTSAVGILP-LALQYG------ 298 (567)
T ss_dssp HHHHHHHHHTTTCGGGSGGGEEEECSCH-HHHHHHTCCGGGBCCCCT---T-SCGGGCTTSHHHHHH-HHHHHC------
T ss_pred HHHHHHHHhccccchhhcCeEEEECCCh-HHHHHcCCChhceecCcc---C-CCCcchhhhhhhHHH-HHHHcC------
Confidence 7773 2 1 2588998753 222111 011233322 1 112223322222111 111111
Q ss_pred HHHHHHHHHHHhhhHHHHHHH-Hhch-HHHHHHH----HHhcCCCeEEEEeCCCC-HHHHHHHHHHHHHhcccc
Q 006659 453 QARREAIIDGLCDLPNKVREV-LKLD-QEMKVLA----KQLIAEQSLLVFGRGYN-YATALEGALKVKEVALMH 519 (636)
Q Consensus 453 ~~~~~~~~~~l~~l~~~~~~~-~~~~-~~~~~~a----~~l~~~~~~~~lG~G~~-~~~A~e~alKl~E~~~~~ 519 (636)
.+.++++++....+.+.+... ++.+ +..-.++ ..+.+.+...++..... ...+....+-.+|..+..
T Consensus 299 ~d~~~~lL~GA~~md~~f~~~~l~~N~p~llAl~~~w~~~~~G~~~~~llpY~~~L~~f~~w~qQL~mES~GK~ 372 (567)
T 3ujh_A 299 YDVAQEFLNGAHAMDVHFKTAELADNLPMLMGLISVWNATFFGYSNVAVLPYAQALLRFPAHIQQLTMESNGKR 372 (567)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHTSCCCEEEEEESCGGGTTHHHHHHHHHHHHHCCS
T ss_pred chHHHHHHHHHHHHHHHhhcCChhhCHHHHHHHHHHHHHHcCCCCeEEEecccHHHHHHHHHHHHHHHhccCCc
Confidence 122344444444444444321 1111 1111222 22356777777766543 556667777899999864
No 92
>3hjb_A Glucose-6-phosphate isomerase; PGI, IDP01329, gluconeogenesi glycolysis, structural genomics, center for STRU genomics of infectious diseases; HET: PG4; 1.50A {Vibrio cholerae} PDB: 3nbu_A
Probab=95.52 E-value=0.013 Score=63.55 Aligned_cols=188 Identities=14% Similarity=0.059 Sum_probs=101.6
Q ss_pred CCeEEEEeechhHHHHHHHHHHHHHhc-CCcEEEeeccc---hhcccCCCC-CCcEEEEEcCCCCCHHHHHHHHHHHH--
Q 006659 319 SRRIVFIGCGTSYNAALAARPILEELS-DLPVTMEIASD---LVDRQAPIY-REDTAVFVSQSGETADTLQALEYASE-- 391 (636)
Q Consensus 319 ~~~I~i~G~G~S~~aa~~~~~~~~~~~-~~~~~~~~~~e---~~~~~~~~~-~~dlvI~iS~SG~t~e~i~al~~ak~-- 391 (636)
.+.|+++|+|+|+-....+...+.... +..+...+..+ +......++ +.+++|++|.||.|.||+..++.+|+
T Consensus 172 i~~VV~IGIGGS~LGp~~v~eAL~~~~~~~~l~FvsNvDp~~l~~~L~~Ld~~~TLfiViSKSgtT~ET~~n~~~ar~wl 251 (574)
T 3hjb_A 172 ITDVVNIGIGGSDLGPYMVTEALVPYKNHLTVHFVSNVDGTHMAETLKNVDPETTLFLVASKTFTTQETMTNAHTARDWF 251 (574)
T ss_dssp CCEEEEECCGGGTHHHHHHHHHTGGGCCSCEEEEECCSSHHHHHHHHTTCCGGGEEEEEECSSSCCHHHHHHHHHHHHHH
T ss_pred CCeEEEEecccchHHHHHHHHHhhcccCCCeEEEEeCCCHHHHHHHHhcCCcccEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 589999999999988888877776543 23444333222 222223344 57899999999999999987776553
Q ss_pred --c-C------CeEEEEEcCCCCcccccc---CeeEEcCCCCcccccchhhHHHHHHHHHHHHHHHhcCCCCcHHHHHHH
Q 006659 392 --N-G------ALCVGITNTVGSAIARKT---HCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISTQARREAI 459 (636)
Q Consensus 392 --~-g------~~vi~IT~~~~s~La~~a---d~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~~~~~~~~~ 459 (636)
+ | -..|+||.+. +.+.+.. +..+.++.. +...-|..+.+-++- ++.++ .+.++++
T Consensus 252 ~~~~~~~~~~~khfVavTt~~-~~~~~fgi~~~~~F~~~D~----VGGRySvlSaVGL~p--a~~~G------~d~~~~l 318 (574)
T 3hjb_A 252 LKAAGDEAHVAKHFAALSTNG-KAVAEFGIDTDNMFEFWDW----VGGRYSLWSAIGLSI--ILSIG------YDNFVEL 318 (574)
T ss_dssp HHHHCSGGGGGGTEEEESSCH-HHHHHHTCCGGGEECCCTT----SCGGGCTTTGGGHHH--HHHHC------HHHHHHH
T ss_pred HHhcCCcchhcCEEEEEcCCh-HHHHHcCCchhcEEeCCCC----CCcchhhcchhHHHH--HHHcC------hHHHHHH
Confidence 2 2 2478888753 3332221 124444331 112222222222211 12221 1234455
Q ss_pred HHHHhhhHHHHHHH-HhchH-HHHH----HHHHhcCCCeEEEEeCCCC-HHHHHHHHHHHHHhcccc
Q 006659 460 IDGLCDLPNKVREV-LKLDQ-EMKV----LAKQLIAEQSLLVFGRGYN-YATALEGALKVKEVALMH 519 (636)
Q Consensus 460 ~~~l~~l~~~~~~~-~~~~~-~~~~----~a~~l~~~~~~~~lG~G~~-~~~A~e~alKl~E~~~~~ 519 (636)
++....+.+.+... ++.+. ..-. +...+.+.+...++..... ...+....+-.+|..+..
T Consensus 319 L~GA~~md~hf~~~~l~~N~p~llAll~iwy~~~~G~~~~~llpY~~~L~~f~~w~qQL~mES~GK~ 385 (574)
T 3hjb_A 319 LAGAHEMDQHFVNTPFESNIPVILALIGIWYNNFHGAESEAILPYDQYLHRFAAYFQQGNMESNGKY 385 (574)
T ss_dssp HHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHTSCCCEEEEEESCGGGTTHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHhhcCCcccCHHHHHHHHHHHHHhcCCCCeEEEEECcHHHHHHHHHHHHHHHhccCCc
Confidence 55544444444331 11111 1111 2223346777777766543 566677778899999865
No 93
>3qki_A Glucose-6-phosphate isomerase; structural genomics, structural genomics consortium, SGC; 1.92A {Plasmodium falciparum} PDB: 3pr3_A
Probab=95.52 E-value=0.014 Score=63.62 Aligned_cols=188 Identities=13% Similarity=0.134 Sum_probs=100.8
Q ss_pred CCeEEEEeechhHHHHHHHHHHHHHhc-------CC-----------------cEEEeec---cchhcccCCCC-CCcEE
Q 006659 319 SRRIVFIGCGTSYNAALAARPILEELS-------DL-----------------PVTMEIA---SDLVDRQAPIY-REDTA 370 (636)
Q Consensus 319 ~~~I~i~G~G~S~~aa~~~~~~~~~~~-------~~-----------------~~~~~~~---~e~~~~~~~~~-~~dlv 370 (636)
.+.|+.+|.|+|+-...++...+.... +. .+...+. .++......++ +.+++
T Consensus 166 ~~~vV~IGIGGS~LGp~~v~eAL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~FvsNvDp~~l~~~L~~Ld~~~TLf 245 (597)
T 3qki_A 166 FKNVICIGIGGSYLGTEFVYEAMKYYYYNMELNKNEKDQVNNFNNNYDQDNVFNVRFLANVDPNDVNRAIQNLDQYDTLV 245 (597)
T ss_dssp CCEEEEECCGGGTHHHHHHHHHHHHHHHHHTTSCCCTTCCCCTTCCCSSTTCCEEEEECCSSHHHHHHHHTTCCGGGEEE
T ss_pred ceeEEEEecccccHHHHHHHHHhccchhcccccccccccccccccccccccCceEEEEeCCCHHHHHHHHhhCCcccEEE
Confidence 589999999999887777766665431 11 1333322 22222223344 57899
Q ss_pred EEEcCCCCCHHHHHHHHHHHH----c-C------CeEEEEEcCCCCccccc----cCeeEEcCCCCcccccchhhHHHHH
Q 006659 371 VFVSQSGETADTLQALEYASE----N-G------ALCVGITNTVGSAIARK----THCGVHINAGAEIGVASTKAYTSQI 435 (636)
Q Consensus 371 I~iS~SG~t~e~i~al~~ak~----~-g------~~vi~IT~~~~s~La~~----ad~~l~~~~~~e~~~~~t~s~~~~~ 435 (636)
|++|-||.|.||+..++.+|+ + | -.+|+||.+. .+++. .+.++.++.. +...-|..+.+
T Consensus 246 iViSKSgtT~ET~~n~~~~r~wl~~~~g~~~~~~kh~vAvT~~~--~~a~~fGi~~~n~F~~~d~----VGGRySvlSaV 319 (597)
T 3qki_A 246 IIISKTFTTAETMLNARSIKKWLSLKIKDDENLSKHMVAVSTNL--KLTDEFGISRDNVFEFWDW----VGGRFSVTSSV 319 (597)
T ss_dssp EEECSSSCCHHHHHHHHHHHHHHTTTCCSHHHHGGGEEEECSCH--HHHHHHTCCGGGEECCCTT----SCGGGCTTSHH
T ss_pred EEecCCCCCHHHHHHHHHHHHHHHHhcCCcccccCeEEEECCCh--HHHHHcCCChhcEecCCcc----cCccccccchh
Confidence 999999999999998888775 2 3 2588999753 22221 1124444331 11222222222
Q ss_pred HHHHHHHHHHhcCCCCcHHHHHHHHHHHhhhHHHHHHH-Hhch-HHHHHH----HHHhcCCCeEEEEeCCCC-HHHHHHH
Q 006659 436 VVMAMLALAIGGDTISTQARREAIIDGLCDLPNKVREV-LKLD-QEMKVL----AKQLIAEQSLLVFGRGYN-YATALEG 508 (636)
Q Consensus 436 ~~l~lL~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~-~~~~-~~~~~~----a~~l~~~~~~~~lG~G~~-~~~A~e~ 508 (636)
-++- +++.++ .+.++++++....+.+.+... ++.+ +..-.+ ...+.+.+...++..... ...+...
T Consensus 320 GLLP-iAla~G------~d~~~~lL~GA~~md~hf~~~~l~~N~p~llAl~~~~~~~~~G~~~~~llpY~~~L~~f~~w~ 392 (597)
T 3qki_A 320 GILP-LSIAFG------YKNMRNFLNGCHDMDEHFLHADLKENIPVLLALTSFYNSHFFDYKNVAILPYFQNLLKFSAHI 392 (597)
T ss_dssp HHHH-HHHHHC------HHHHHHHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHHHCCCEEEEEESCGGGTTHHHHH
T ss_pred hHHH-HHHHcC------hHHHHHHHHhHHHHHHHhhCCChhhCHHHHHHHHHHHHHhcCCCCeEEEeeCcHHHHHHHHHH
Confidence 2111 122111 122444555444444444331 1111 111111 222357777777765543 5666777
Q ss_pred HHHHHHhcccc
Q 006659 509 ALKVKEVALMH 519 (636)
Q Consensus 509 alKl~E~~~~~ 519 (636)
.+-.+|..+..
T Consensus 393 qQL~mES~GK~ 403 (597)
T 3qki_A 393 QQLSMESNGKS 403 (597)
T ss_dssp HHHHHHHHCCS
T ss_pred HHHHHhccCcc
Confidence 78899999864
No 94
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=92.93 E-value=0.36 Score=43.94 Aligned_cols=87 Identities=9% Similarity=0.040 Sum_probs=58.0
Q ss_pred HHHHHHHHHhcCCCeEEEEeCCCCHHHHHHHHHHHHHhccccccccccccccccccccccCCCCeEEEEeCCcchHHHHH
Q 006659 478 QEMKVLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPILVIATRDACFSKQQS 557 (636)
Q Consensus 478 ~~~~~~a~~l~~~~~~~~lG~G~~~~~A~e~alKl~E~~~~~a~~~~~~Ef~HGp~~~~~~~~~vi~l~~~~~~~~~~~~ 557 (636)
+.++-+|+.+.+...+++.|.|..-+++.|.--- .-+++...-- .+ .| .++++..++++.+.+. .....+
T Consensus 26 ~AA~llaqai~~~g~IyvfG~Ghs~~~~~e~~~~---~e~l~~~~~~-~~-~~----~i~~~D~vii~S~Sg~-n~~~ie 95 (170)
T 3jx9_A 26 DVVRLLAQALVGQGKVYLDAYGEFEGLYPMLSDG---PDQMKRVTKI-KD-HK----TLHAVDRVLIFTPDTE-RSDLLA 95 (170)
T ss_dssp HHHHHHHHHHHTTCCEEEEECGGGGGGTHHHHTS---TTCCTTEEEC-CT-TC----CCCTTCEEEEEESCSC-CHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEECCCcHHHHHHHHHcc---cCCccchhhh-hh-cC----CCCCCCEEEEEeCCCC-CHHHHH
Confidence 3345566667788999999999998888763111 1111111100 00 11 4677888888887654 455677
Q ss_pred HHHHHHhcCCeEEEEec
Q 006659 558 VIQQLHARKGRLIVMCS 574 (636)
Q Consensus 558 ~~~~~~~~g~~v~vi~~ 574 (636)
++..++++|.+++.|++
T Consensus 96 ~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 96 SLARYDAWHTPYSIITL 112 (170)
T ss_dssp HHHHHHHHTCCEEEEES
T ss_pred HHHHHHHCCCcEEEEeC
Confidence 88899999999999999
No 95
>2nap_A Protein (periplasmic nitrate reductase); nitrogenous acceptor, dissimilatory nitrate reductase; HET: MGD MES; 1.90A {Desulfovibrio desulfuricans} SCOP: b.52.2.2 c.81.1.1 PDB: 2jim_A* 2jir_A* 2jip_A* 2v45_A* 2v3v_A* 2jiq_A* 2jio_A*
Probab=92.14 E-value=8 Score=43.63 Aligned_cols=125 Identities=13% Similarity=0.181 Sum_probs=69.2
Q ss_pred CCCCcEEEEEcCCC--CCHHHHHHHHHHHHc--CCeEEEEEcCCCCccccccCeeEEcCCCCcccccchhhHHHHHHHHH
Q 006659 364 IYREDTAVFVSQSG--ETADTLQALEYASEN--GALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVMA 439 (636)
Q Consensus 364 ~~~~dlvI~iS~SG--~t~e~i~al~~ak~~--g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~~~t~s~~~~~~~l~ 439 (636)
+..-|++|++...- ..+.....+..++++ |+++|.|-.. .++.++.||..|.+..|.+. . +++.
T Consensus 164 ~~~ad~il~~G~n~~~~~p~~~~~~~~a~~~~~g~klividP~-~t~ta~~Ad~~l~irPGtD~-------a----l~~a 231 (723)
T 2nap_A 164 IDQATCFFIIGSNTSEAHPVLFRRIARRKQVEPGVKIIVADPR-RTNTSRIADMHVAFRPGTDL-------A----FMHS 231 (723)
T ss_dssp GGTCSEEEEESCCHHHHSHHHHHHHHHHHHHCTTCEEEEECSB-CCGGGGGCSEEECCCTTTHH-------H----HHHH
T ss_pred HhHCCEEEEEcCChhHhCcHHHHHHHHHHhhCCCCEEEEEcCc-CCchhhhhCeeeecCCCcHH-------H----HHHH
Confidence 34566777764321 223444566778887 9999999776 77888999998877554332 1 1111
Q ss_pred HHHHHHhcCCCCcHHHH----------------HHHHHHHhhh-HHHHHHHHhc-hHHHHHHHHHhcCC-CeEEEEeCCC
Q 006659 440 MLALAIGGDTISTQARR----------------EAIIDGLCDL-PNKVREVLKL-DQEMKVLAKQLIAE-QSLLVFGRGY 500 (636)
Q Consensus 440 lL~~~~~~~~~~~~~~~----------------~~~~~~l~~l-~~~~~~~~~~-~~~~~~~a~~l~~~-~~~~~lG~G~ 500 (636)
++-..+... ..+.+.+ +++.+.+... |+.+.++... .+.++++|+.+... ..+++.|.|.
T Consensus 232 l~~~ii~~~-l~D~~fl~~~tn~~~g~~~~~gf~~l~~~~~~~tpe~~a~itGv~~~~i~~~A~~~a~a~~~~i~~g~g~ 310 (723)
T 2nap_A 232 MAWVIINEE-LDNPRFWQRYVNFMDAEGKPSDFEGYKAFLENYRPEKVAEICRVPVEQIYGAARAFAESAATMSLWCMGI 310 (723)
T ss_dssp HHHHHHHTT-CSCHHHHHHHEEEECTTSCEECHHHHHHHHGGGCHHHHHHHHTSCHHHHHHHHHHHHHSSSEEEEECTTT
T ss_pred HHHHHHHcC-CccHHHHHHhhccccccccCcHHHHHHHHHhcCCHHHHHHHHCcCHHHHHHHHHHHHhCCCeEEEecccc
Confidence 222222221 1122222 2223333322 4444443333 56788899888654 4577778886
Q ss_pred C
Q 006659 501 N 501 (636)
Q Consensus 501 ~ 501 (636)
.
T Consensus 311 ~ 311 (723)
T 2nap_A 311 N 311 (723)
T ss_dssp S
T ss_pred c
Confidence 4
No 96
>2iv2_X Formate dehydrogenase H; oxidoreductase, 4Fe-4S, anaerobic, complete proteome, direct protein sequencing, Fe4S4, iron, iron sulfur cluster; HET: 2MD MGD; 2.27A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1fdi_A* 1fdo_A* 1aa6_A*
Probab=90.93 E-value=3.7 Score=46.40 Aligned_cols=139 Identities=14% Similarity=0.157 Sum_probs=73.7
Q ss_pred CCCcEEEEEcCC--CCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCcccccchhhHHHHHHHHHHHH
Q 006659 365 YREDTAVFVSQS--GETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVMAMLA 442 (636)
Q Consensus 365 ~~~dlvI~iS~S--G~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~ 442 (636)
..-|++|++... ...+.....+..++++|+++|.|-.. .++.++.||..|.+..|.+. . +++.++-
T Consensus 165 ~~ad~il~~G~n~~~~~p~~~~~l~~a~~~G~klividPr-~t~ta~~Ad~~l~irPGtD~-------a----L~~al~~ 232 (715)
T 2iv2_X 165 DNTDLVFVFGYNPADSHPIVANHVINAKRNGAKIIVCDPR-KIETARIADMHIALKNGSNI-------A----LLNAMGH 232 (715)
T ss_dssp GGCSEEEEESCCHHHHCHHHHHHHHHHHHTTCEEEEECSS-CCHHHHTCSEEECCCTTCHH-------H----HHHHHHH
T ss_pred hcCCEEEEEcCChHHhCHHHHHHHHHHHHCCCeEEEEcCC-CCchhHhhCEEeccCCCcHH-------H----HHHHHHH
Confidence 345677776432 12344556778889999999999765 67888999998877554332 1 1112222
Q ss_pred HHHhcCCCCcHHHHHHH-------HHHHhh-hHHHHHHHHhc-hHHHHHHHHHhcC-CCeEEEEeCCCCH---HH-HHHH
Q 006659 443 LAIGGDTISTQARREAI-------IDGLCD-LPNKVREVLKL-DQEMKVLAKQLIA-EQSLLVFGRGYNY---AT-ALEG 508 (636)
Q Consensus 443 ~~~~~~~~~~~~~~~~~-------~~~l~~-l~~~~~~~~~~-~~~~~~~a~~l~~-~~~~~~lG~G~~~---~~-A~e~ 508 (636)
..+.. ...+.+.+++. .+.+.. -|+.+.+..-. .+.++++|+.+.. .+.+++.|.|... |. +..+
T Consensus 233 ~ii~~-~l~D~~fl~~~t~gf~~l~~~v~~~tpe~~a~itGv~~~~I~~lA~~~a~a~~~~i~~g~g~~~~~~g~~~~~a 311 (715)
T 2iv2_X 233 VIIEE-NLYDKAFVASRTEGFEEYRKIVEGYTPESVEDITGVSASEIRQAARMYAQAKSAAILWGMGVTQFYQGVETVRS 311 (715)
T ss_dssp HHHHT-TCSCHHHHHHHEECHHHHHHHHHTCCSGGGHHHHCCCHHHHHHHHHHHHHSSSEEEEEETTGGGSSSHHHHHHH
T ss_pred HHHHC-CCcCHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHCcCHHHHHHHHHHHHhCCCeEEEEcccccccccHHHHHHH
Confidence 22222 11222222222 222211 12222222222 4568888988864 4566777887442 33 3344
Q ss_pred HHHHHHhc
Q 006659 509 ALKVKEVA 516 (636)
Q Consensus 509 alKl~E~~ 516 (636)
...|.-++
T Consensus 312 ~~~L~~l~ 319 (715)
T 2iv2_X 312 LTSLAMLT 319 (715)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 44555554
No 97
>2e7z_A Acetylene hydratase AHY; tungstoprotein, DMSO reductase family, iron-sulfur-cluster, lyase; HET: MGD; 1.26A {Pelobacter acetylenicus}
Probab=86.65 E-value=2.1 Score=48.52 Aligned_cols=124 Identities=12% Similarity=0.190 Sum_probs=69.5
Q ss_pred CCCCcEEEEEc-CCCCC-H-HHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCcccccchhhHHHHHHHHHH
Q 006659 364 IYREDTAVFVS-QSGET-A-DTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVMAM 440 (636)
Q Consensus 364 ~~~~dlvI~iS-~SG~t-~-e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~~~t~s~~~~~~~l~l 440 (636)
+..-|++|++. ....+ + -....++.++++|+++|.|-.. .+..++.||..|.+..|.+. .+++.+
T Consensus 158 ~~~ad~il~~G~n~~~~~p~~~~~~l~~a~~~G~klividPr-~t~ta~~Ad~~l~irPGtD~-----------al~~a~ 225 (727)
T 2e7z_A 158 FADSNCLLFIGKNLSNHNWVSQFNDLKAALKRGCKLIVLDPR-RTKVAEMADIWLPLRYGTDA-----------ALFLGM 225 (727)
T ss_dssp TTTCSEEEEESCCCBTTBSHHHHHHHHHHHHHTCEEEEECSS-CCHHHHHCSEEECCCTTCHH-----------HHHHHH
T ss_pred cccCCEEEEECCChhhcCCHHHHHHHHHHHHCCCeEEEECCC-CCcchhhcceeecCCCCcHH-----------HHHHHH
Confidence 44556666664 33332 3 5567788889999999999876 67888899998877554332 111222
Q ss_pred HHHHHhcCCCCcHHHH-------HHHHHHHhh-hHHHHHHHHhc-hHHHHHHHHHhcCC-CeEEEEeCCC
Q 006659 441 LALAIGGDTISTQARR-------EAIIDGLCD-LPNKVREVLKL-DQEMKVLAKQLIAE-QSLLVFGRGY 500 (636)
Q Consensus 441 L~~~~~~~~~~~~~~~-------~~~~~~l~~-l~~~~~~~~~~-~~~~~~~a~~l~~~-~~~~~lG~G~ 500 (636)
+-..+... ..+.+.+ +++.+.+.. -|+.+.+.... .+.++++|+.+... +.+++.|.|.
T Consensus 226 ~~~ii~~~-l~d~~fv~~~t~gf~~l~~~v~~~tpe~~a~itGv~~~~I~~~A~~~a~a~~~~i~~g~g~ 294 (727)
T 2e7z_A 226 INVIINEQ-LYDKEFVENWCVGFEELKERVQEYPLDKVAEITGCDAGEIRKAAVMFATESPASIPWAVST 294 (727)
T ss_dssp HHHHHHTT-CSCHHHHHHHEECHHHHHHHHTTCCHHHHHHHHCCCHHHHHHHHHHHHHSSSEECCCCSGG
T ss_pred HHHHHHCC-cccHHHHHHHhHHHHHHHHHHhcCCHHHHHHHHCcCHHHHHHHHHHHHhCCCeEEEeCchh
Confidence 22222222 1222222 222233322 23444443333 56788899888654 4566667764
No 98
>2q8n_A Glucose-6-phosphate isomerase; TM1385, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: 2PE; 1.82A {Thermotoga maritima MSB8}
Probab=86.19 E-value=1.5 Score=46.46 Aligned_cols=98 Identities=9% Similarity=0.100 Sum_probs=61.2
Q ss_pred HHHHHHHHHhcCCCeEEEEeCCCCHHHHHHHHHHHHHhc-----------cccccccc--cccccccccccccCCCCeEE
Q 006659 478 QEMKVLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVA-----------LMHSEGIL--AGEMKHGPLALVDENLPILV 544 (636)
Q Consensus 478 ~~~~~~a~~l~~~~~~~~lG~G~~~~~A~e~alKl~E~~-----------~~~a~~~~--~~Ef~HGp~~~~~~~~~vi~ 544 (636)
+.++++++.+...++++++|-|-++-.++.....+.-.. .++..... .+++.+-....+++.+.+|+
T Consensus 66 ~~i~~~a~~i~~~~~Vv~IGIGGS~LG~~~~~~aL~~~~~~~~~~~~~~~~~~v~~~~nvdp~~~~~~l~~L~~~~TlvI 145 (460)
T 2q8n_A 66 DSVKSLEDWIINFDTVVVLGIGGSGLGNLALHYSLRPLNWNEMTREERNGYARVFVVDNVDPDLMSSVLDRIDPKTTLFN 145 (460)
T ss_dssp HHHHTTHHHHTTCSEEEEECCGGGTHHHHHHHHHHSCTTGGGSCTTTTTTCCEEEEECSCCHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHHHHHHhcCCCEEEEEecCchHHHHHHHHHHHHhhhhcccccccccCCcceEEecCCCHHHHHHHHhcCCCCCEEEE
Confidence 556677777778899999999988888877766665321 22333332 55666655666766555555
Q ss_pred EEe-CCcchHHHHHHHHHHHhc-----C---CeEEEEecCC
Q 006659 545 IAT-RDACFSKQQSVIQQLHAR-----K---GRLIVMCSKG 576 (636)
Q Consensus 545 l~~-~~~~~~~~~~~~~~~~~~-----g---~~v~vi~~~~ 576 (636)
+.+ .+.+.|-+ ...+.+++. | .++++||+..
T Consensus 146 viSKSGtT~ET~-~~~~~ar~~l~~~~G~~~~~~VAvT~~~ 185 (460)
T 2q8n_A 146 VISKSGSTAEVM-ATYSIARGILEAYGLDPREHMLITTDPE 185 (460)
T ss_dssp EECSSSCCHHHH-HHHHHHHHHHHHTTCCGGGTEEEEECSS
T ss_pred EEcCCCCCHHHH-HHHHHHHHHHHHhcCCccCeEEEEeCCC
Confidence 554 45555533 333333333 5 7899999873
No 99
>1h0h_A Formate dehydrogenase (large subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: b.52.2.2 c.81.1.1
Probab=85.40 E-value=8.3 Score=45.22 Aligned_cols=57 Identities=11% Similarity=0.166 Sum_probs=38.5
Q ss_pred CCCcEEEEEcCCC--CCHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCc
Q 006659 365 YREDTAVFVSQSG--ETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAE 422 (636)
Q Consensus 365 ~~~dlvI~iS~SG--~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e 422 (636)
..-|++|++...- ..+.....+..|+++|+++|+|-.. -+..++.||..|.+..|.+
T Consensus 183 ~~ad~il~~G~N~~~~~p~~~~~~~~a~~~G~klivIDPr-~t~ta~~AD~~l~irPGTD 241 (977)
T 1h0h_A 183 KNSDVILMMGSNPAENHPISFKWVMRAKDKGATLIHVDPR-YTRTSTKCDLYAPLRSGSD 241 (977)
T ss_dssp GGCSEEEEESCCHHHHSTTHHHHHHHHHHTTCEEEEECSS-CCTTGGGCSEEECCCTTCH
T ss_pred hhCCEEEEECCChHHhCcHHHHHHHHHHHCCCeEEEECCC-CCchhHHhCeeeccCCCch
Confidence 3456777764321 1122345567788999999999876 6778899999887765443
No 100
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=84.11 E-value=15 Score=36.24 Aligned_cols=96 Identities=16% Similarity=0.100 Sum_probs=56.8
Q ss_pred HHcCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEE--eeccchh-cccCCCCCCcEEEEEcCCCCCHHHHHHHHHHHH
Q 006659 315 TIRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTM--EIASDLV-DRQAPIYREDTAVFVSQSGETADTLQALEYASE 391 (636)
Q Consensus 315 ~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~--~~~~e~~-~~~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~ 391 (636)
.+.+.++|+|+|..... ......+..+. +..... ..+.-+. ........-|++|++...-+ -.++++|+.
T Consensus 67 ~i~~~~~ILfVgTk~~a--q~~V~k~A~~~-g~~yv~~RWlgG~LTN~~t~~f~~PdlliV~Dp~~e----~~AI~EA~~ 139 (295)
T 2zkq_b 67 AIENPADVSVISSRNTG--QRAVLKFAAAT-GATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRAD----HQPLTEASY 139 (295)
T ss_dssp HSSCGGGEEEEECSHHH--HHHHHHHHHHH-CCEEEESSCCCC-CCCTTCSSCCCCSEEEESCTTTT----HHHHHHHHH
T ss_pred HHhCCCeEEEEeCcHHH--HHHHHHHHHHh-CCceecceEecccccCcccccccCCCeEEEeCCCcc----hhHHHHHHH
Confidence 44567889999986542 23344444443 322111 1111111 11122456788888764332 478889999
Q ss_pred cCCeEEEEEcCCCCccccccCeeEEcCC
Q 006659 392 NGALCVGITNTVGSAIARKTHCGVHINA 419 (636)
Q Consensus 392 ~g~~vi~IT~~~~s~La~~ad~~l~~~~ 419 (636)
.|++||+|.+. ++++ ...|+.|+.+.
T Consensus 140 lgIPvIalvDT-n~dp-~~VDy~IP~Nd 165 (295)
T 2zkq_b 140 VNLPTIALCNT-DSPL-RYVDIAIPCNN 165 (295)
T ss_dssp HTCCEEEEECT-TCCC-TTCSEEEESCS
T ss_pred hCCCEEEEecC-CCCc-ccCCEEEeCCC
Confidence 99999999987 5555 46888886643
No 101
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=83.94 E-value=9.7 Score=35.55 Aligned_cols=93 Identities=11% Similarity=0.080 Sum_probs=55.4
Q ss_pred CCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEE--eeccchh-cccCCCCCCcEEEEEcCCCCCHHHHHHHHHHHHcCC
Q 006659 318 RSRRIVFIGCGTSYNAALAARPILEELSDLPVTM--EIASDLV-DRQAPIYREDTAVFVSQSGETADTLQALEYASENGA 394 (636)
Q Consensus 318 ~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~--~~~~e~~-~~~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~~g~ 394 (636)
+.++|.|+|..... ......+..+. +..... ..+.-+. .......+.|++|++...- =-.++++|+..|+
T Consensus 67 ~~~~iLfVgTk~~~--~~~V~~~A~~~-g~~~v~~rwlgG~LTN~~~~~f~~PdlliV~Dp~~----e~~ai~EA~~l~I 139 (208)
T 1vi6_A 67 EPSKILLVAARQYA--HKPVQMFSKVV-GSDYIVGRFIPGTLTNPMLSEYREPEVVFVNDPAI----DKQAVSEATAVGI 139 (208)
T ss_dssp CGGGEEEEECSGGG--HHHHHHHHHHH-CCEEEESSCCTTTTTCTTSTTCCCCSEEEESCTTT----THHHHHHHHHTTC
T ss_pred CCCEEEEEeCCHHH--HHHHHHHHHHh-CCeeecCEECCCcccChhhHhhCCCCEEEEECCCc----chhHHHHHHHhCC
Confidence 56899999986553 23334444443 322211 1122221 1112234677888876433 2468889999999
Q ss_pred eEEEEEcCCCCccccccCeeEEcCC
Q 006659 395 LCVGITNTVGSAIARKTHCGVHINA 419 (636)
Q Consensus 395 ~vi~IT~~~~s~La~~ad~~l~~~~ 419 (636)
+||+|.+. +++.. ..|+.|+.+.
T Consensus 140 PvIalvDT-n~~p~-~Vd~~IP~Nd 162 (208)
T 1vi6_A 140 PVVALCDS-NNSSA-DVDLVIPTNN 162 (208)
T ss_dssp CEEEEECT-TCCCT-TCSEEEESCC
T ss_pred CEEEEeCC-CCCcc-ccCEEEeCCC
Confidence 99999987 55554 6788886643
No 102
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=83.21 E-value=9.5 Score=36.67 Aligned_cols=96 Identities=17% Similarity=0.132 Sum_probs=56.5
Q ss_pred HcCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEE-Eeeccchh-cccCCCCCCcEEEEEcCCCCCHHHHHHHHHHHHcC
Q 006659 316 IRRSRRIVFIGCGTSYNAALAARPILEELSDLPVT-MEIASDLV-DRQAPIYREDTAVFVSQSGETADTLQALEYASENG 393 (636)
Q Consensus 316 l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~-~~~~~e~~-~~~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~~g 393 (636)
+.+.++|+|+|..... ......+..+.+...+. -..+.-+. ........-|++|++...- --.++++|+..|
T Consensus 101 ~~~~~~iLfVgTk~~a--q~~V~~~A~~~g~~yv~~RWlgG~LTN~~~~~f~~PdlliV~Dp~~----e~~AI~EA~~lg 174 (253)
T 3bch_A 101 IENPADVSVISSRNTG--QRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRA----DHQPLTEASYVN 174 (253)
T ss_dssp CSSGGGEEEEECSHHH--HHHHHHHHHHHCCEEEESCCCTTTTTCCSCSTTCSCSEEEESCTTT----THHHHHHHHHTT
T ss_pred HhCCCeEEEEeCCHHH--HHHHHHHHHHhCCeeecceecCCcccCccccccCCCCEEEEECCCc----cchHHHHHHHhC
Confidence 3566789999987543 23344444443322211 01122221 1112235678888875433 247888999999
Q ss_pred CeEEEEEcCCCCccccccCeeEEcCC
Q 006659 394 ALCVGITNTVGSAIARKTHCGVHINA 419 (636)
Q Consensus 394 ~~vi~IT~~~~s~La~~ad~~l~~~~ 419 (636)
++||+|.+. ++++ ...|+.|+.+.
T Consensus 175 IPvIalvDT-n~dp-~~VDy~IP~Nd 198 (253)
T 3bch_A 175 LPTIALCNT-DSPL-RYVDIAIPCNN 198 (253)
T ss_dssp CCEEEEECT-TCCC-TTCSEEEESCC
T ss_pred CCEEEEEcC-CCCc-ccCceEeecCC
Confidence 999999987 5555 46888886643
No 103
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=82.70 E-value=7.5 Score=38.21 Aligned_cols=96 Identities=9% Similarity=0.085 Sum_probs=56.9
Q ss_pred HHcCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEE--eeccchh-cccCCCCCCcEEEEEcCCCCCHHHHHHHHHHHH
Q 006659 315 TIRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTM--EIASDLV-DRQAPIYREDTAVFVSQSGETADTLQALEYASE 391 (636)
Q Consensus 315 ~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~--~~~~e~~-~~~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~ 391 (636)
.+.+.++|+|+|..... ......+..+. +..... ..+..|. ........-|++|++...- --.++++|..
T Consensus 71 ~i~~~~~ILfVgTk~~a--q~aV~k~A~~t-G~~yV~~RWlgGtLTN~~t~~f~ePdllvV~Dp~~----d~qAI~EA~~ 143 (305)
T 3iz6_A 71 AIENPQDIIVQSARPYG--QRAVLKFAQYT-GAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRT----DHQPIKESAL 143 (305)
T ss_dssp HTTSSCCEEEECCSHHH--HHHHHHHHHHH-TCEEECSCCCTTTTTTTTTSCSSCCSEEEESCTTT----THHHHHHHHH
T ss_pred HHhCCCeEEEEeCcHHH--HHHHHHHHHHh-CCccccCcccCCcccCcccccccCCceeEEeCccc----chHHHHHHHH
Confidence 34567789999887542 23333333343 322111 1122221 1112245678888886433 3577889999
Q ss_pred cCCeEEEEEcCCCCccccccCeeEEcCC
Q 006659 392 NGALCVGITNTVGSAIARKTHCGVHINA 419 (636)
Q Consensus 392 ~g~~vi~IT~~~~s~La~~ad~~l~~~~ 419 (636)
.|++||+|.++ ++++. +.|+.|..+.
T Consensus 144 lnIPtIALvDT-nsdp~-~VDy~IP~ND 169 (305)
T 3iz6_A 144 GNIPTIAFCDT-DSPMR-YVDIGIPANN 169 (305)
T ss_dssp HTCCEEEEECT-TSCGG-GCSEEEESCC
T ss_pred cCCCEEEEEcC-CCCcc-ccceEEeCCC
Confidence 99999999987 55554 4788886644
No 104
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=81.71 E-value=11 Score=36.09 Aligned_cols=94 Identities=12% Similarity=0.038 Sum_probs=56.1
Q ss_pred cCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEE--eeccchh-cccCCCCCCcEEEEEcCCCCCHHHHHHHHHHHHcC
Q 006659 317 RRSRRIVFIGCGTSYNAALAARPILEELSDLPVTM--EIASDLV-DRQAPIYREDTAVFVSQSGETADTLQALEYASENG 393 (636)
Q Consensus 317 ~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~--~~~~e~~-~~~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~~g 393 (636)
.+..+|.|+|..... ......+..+ .+..... ..+.-+. ........-|++|++...-+ -.+++.|...|
T Consensus 68 ~~~~~vlfVgTk~~~--q~~V~k~A~~-~g~~~v~~rwlgGtLTN~~t~~f~~PdllvV~Dp~~d----~~ai~EA~~l~ 140 (252)
T 3u5c_A 68 PNPEDVVAISSRTFG--QRAVLKFAAH-TGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSD----AQAIKEASYVN 140 (252)
T ss_dssp SSGGGEEEEECSHHH--HHHHHHHHHH-SSCEEEESCCCTTSSSCTTSTTCCCCSEEEESCTTTT----HHHHHHHHTTT
T ss_pred hcCCEEEEEeCCcHH--HHHHHHHHHH-hCCceecCcccCCcccChhhhhccCCceEEEeCCccc----hHHHHHHHHcC
Confidence 456789999987542 2333343444 3322211 1122221 11123456788888864433 57888999999
Q ss_pred CeEEEEEcCCCCccccccCeeEEcCC
Q 006659 394 ALCVGITNTVGSAIARKTHCGVHINA 419 (636)
Q Consensus 394 ~~vi~IT~~~~s~La~~ad~~l~~~~ 419 (636)
++||+|.+. ++++. ..|+.|+.+.
T Consensus 141 IP~Ial~DT-n~~p~-~VD~~IP~Nd 164 (252)
T 3u5c_A 141 IPVIALTDL-DSPSE-FVDVAIPCNN 164 (252)
T ss_dssp CCEEEEECT-TCCCT-TCSSEEECCT
T ss_pred CCEEEEEcC-CCCcc-cCCEEEeCCC
Confidence 999999987 55554 5788887644
No 105
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=80.07 E-value=4.4 Score=38.83 Aligned_cols=94 Identities=10% Similarity=0.047 Sum_probs=54.3
Q ss_pred HcCCCeEEEEeechhHHHHHHHHHHHHHhcCCcE-E-Eeeccchhc-ccCCCCCCcEEEEEcCCCCCHHHHHHHHHHHHc
Q 006659 316 IRRSRRIVFIGCGTSYNAALAARPILEELSDLPV-T-MEIASDLVD-RQAPIYREDTAVFVSQSGETADTLQALEYASEN 392 (636)
Q Consensus 316 l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~-~-~~~~~e~~~-~~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~~ 392 (636)
+.+.++|+|+|..... ......+..+.+...+ . -..+.-+.- .......-|++|++... .--.++++|+..
T Consensus 63 i~~~~~iLfVgtk~~~--~~~V~~~A~~~g~~yv~~~RWlgG~LTN~~t~~~~~PdlliV~Dp~----~e~~ai~EA~~l 136 (241)
T 2xzm_B 63 VQHPEDVMVVCSRIYG--QRAAIKFAGYTHCKSTSSSRWTPGTLTNYQTLKYEEPRVLIVTDPR----SDFQAIKEASYV 136 (241)
T ss_dssp CSSGGGEEEECCSHHH--HHHHHHHHHHHTCBCCCCSSCCTTTTTCTTCTTCCCCSEEEESCTT----TTHHHHHHHTTT
T ss_pred HhCCCeEEEEECCHHH--HHHHHHHHHHhCCEEeccccccCCcccCccccccCCCCEEEEECCC----cchHHHHHHHHh
Confidence 4566789999886542 2334444444433222 1 112222211 11223456788887543 234688899999
Q ss_pred CCeEEEEEcCCCCccccccCeeEEc
Q 006659 393 GALCVGITNTVGSAIARKTHCGVHI 417 (636)
Q Consensus 393 g~~vi~IT~~~~s~La~~ad~~l~~ 417 (636)
|++||+|.+. ++++. ..|+.|+.
T Consensus 137 ~IPvIalvDT-n~~p~-~VDy~IP~ 159 (241)
T 2xzm_B 137 NIPVIALCDS-DSPLA-YVDVVIPC 159 (241)
T ss_dssp TCCEEECCCS-SSCCT-TCCEECCS
T ss_pred CCCEEEEecC-CCCcc-cccEEEeC
Confidence 9999999987 56554 56776644
No 106
>1zzg_A Glucose-6-phosphate isomerase; structural genomics, riken structural genomics/PR initiative, RSGI, NPPSFA; 1.95A {Thermus thermophilus}
Probab=78.34 E-value=2 Score=44.89 Aligned_cols=114 Identities=9% Similarity=0.026 Sum_probs=64.7
Q ss_pred HHHHHHHHHhc-CCCeEEEEeCCCCHHHHHHHHHHHHHhccccccccc--cccccccccccccCCCCeEEEEe-CCcchH
Q 006659 478 QEMKVLAKQLI-AEQSLLVFGRGYNYATALEGALKVKEVALMHSEGIL--AGEMKHGPLALVDENLPILVIAT-RDACFS 553 (636)
Q Consensus 478 ~~~~~~a~~l~-~~~~~~~lG~G~~~~~A~e~alKl~E~~~~~a~~~~--~~Ef~HGp~~~~~~~~~vi~l~~-~~~~~~ 553 (636)
+.++++++. . ..+.++++|-|-++-.++.....+.. ...+....+ .+++.+-....+++.+.+|++.+ .+.+.|
T Consensus 54 ~~i~~i~~~-~~~~~~Vv~iGIGGS~LG~~~~~~aL~~-~~~~~~~~~n~dp~~~~~~l~~l~~~~TlviviSKSGtT~E 131 (415)
T 1zzg_A 54 REVRRYREA-NPWVEDFVLIGIGGSALGPKALEAAFNE-SGVRFHYLDHVEPEPILRLLRTLDPRKTLVNAVSKSGSTAE 131 (415)
T ss_dssp HHHHHHHHT-CTTCSEEEEECCGGGTHHHHHHHHHHCC-SCCEEEEECSCCHHHHHHHHHHSCGGGEEEEEEESSSCCHH
T ss_pred HHHHHHHHH-hcCCCEEEEEccCccHHHHHHHHHHHhc-CCCceEEecCCCHHHHHHHHhhCCCCCEEEEEEeCCCCCHH
Confidence 445566655 4 56899999998887666655554543 344444444 56777766667766555555554 455544
Q ss_pred HHHHHHHHHHhc-----C----CeEEEEecCCCCcCCCC--CCcceEEEcCC
Q 006659 554 KQQSVIQQLHAR-----K----GRLIVMCSKGDAASIFP--GGSCRVIEVPQ 594 (636)
Q Consensus 554 ~~~~~~~~~~~~-----g----~~v~vi~~~~~~~~~~~--~~~~~~~~~p~ 594 (636)
-+ ...+.+++. | .++++||+.....+... ..+...|.+|.
T Consensus 132 T~-~~~~~ar~~l~~~~G~~~~~~~vavT~~~~s~L~~~a~~~Gi~~f~~~d 182 (415)
T 1zzg_A 132 TL-AGLAVFLKWLKAHLGEDWRRHLVVTTDPKEGPLRAFAEREGLKAFAIPK 182 (415)
T ss_dssp HH-HHHHHHHHHHHHHHGGGGGGGEEEEECSSSSHHHHHHHHHTCEEEECCT
T ss_pred HH-HHHHHHHHHHHHhcCccccCeEEEEeCCCCChHHHHHHHhCCcEEEecc
Confidence 33 333333333 5 78999998732211100 01125678883
No 107
>3ml1_A NAPA, periplasmic nitrate reductase; heterodimer, oxidoreductase; HET: MGD HEC; 1.60A {Ralstonia eutropha} PDB: 3o5a_A* 1ogy_A* 2nya_A*
Probab=77.48 E-value=40 Score=38.41 Aligned_cols=56 Identities=9% Similarity=-0.014 Sum_probs=35.7
Q ss_pred CCCcEEEEEcCC-CCC-HHHHHHHHHHHH--cCCeEEEEEcCCCCccccccCeeEEcCCCC
Q 006659 365 YREDTAVFVSQS-GET-ADTLQALEYASE--NGALCVGITNTVGSAIARKTHCGVHINAGA 421 (636)
Q Consensus 365 ~~~dlvI~iS~S-G~t-~e~i~al~~ak~--~g~~vi~IT~~~~s~La~~ad~~l~~~~~~ 421 (636)
..-|++|++... .++ +-...-+..+++ +|+++|+|-.. .+..++.||..|.+..|.
T Consensus 177 ~~ad~il~~G~N~~~~~p~~~~~i~~a~~~~~G~klivIDPr-~t~ta~~AD~~l~irPGt 236 (802)
T 3ml1_A 177 EAADAFVLWGSNMAEMHPILWTRVTDRRLSHPKTRVVVLSTF-THRCFDLADIGIIFKPQT 236 (802)
T ss_dssp GTCSEEEEESCCHHHHSHHHHHHHHHHHHHSTTCEEEEEESS-BCGGGGTCSEEEECCTTT
T ss_pred hhCCEEEEECCChHHhChHHHHHHHHHHHhcCCCEEEEEeCC-CCchhHHhccEeccCCCH
Confidence 345677776322 221 222233444553 79999999876 778899999998886543
No 108
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=75.11 E-value=15 Score=34.13 Aligned_cols=94 Identities=12% Similarity=0.123 Sum_probs=54.8
Q ss_pred CCCeEEEEeechhHHHHHHHHHHHHHhcCCcEE-Eeeccchh-cccCCCCCCcEEEEEcCCCCCHHHHHHHHHHHHcCCe
Q 006659 318 RSRRIVFIGCGTSYNAALAARPILEELSDLPVT-MEIASDLV-DRQAPIYREDTAVFVSQSGETADTLQALEYASENGAL 395 (636)
Q Consensus 318 ~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~-~~~~~e~~-~~~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~~g~~ 395 (636)
+..+|.|+|..... ......+..+.+...+. -..+.-+. ........-|++|++...- --.++++|...|++
T Consensus 63 ~~~~ilfV~tk~~~--~~~V~k~A~~~g~~~v~~rw~gG~lTN~~~~~~~~Pdllvv~Dp~~----d~~ai~EA~~l~IP 136 (202)
T 3j20_B 63 EPQSILAVSVRLYG--QKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVLIVTDPRA----DHQAMREAVEIGIP 136 (202)
T ss_dssp CSSCEEEECCCTTT--HHHHHHHHHHHSCCCCCSSCCSSSSSCSSSSSCCCCSEEEESCTTT----SHHHHHHHHHHTCC
T ss_pred CCCeEEEEecChHH--HHHHHHHHHHHCCceeCceecCCCcccHhHHhccCCCeEEEeCCcc----chHHHHHHHHcCCC
Confidence 56889999987552 23333333343322221 11122221 1112234678888875433 35788899999999
Q ss_pred EEEEEcCCCCccccccCeeEEcCC
Q 006659 396 CVGITNTVGSAIARKTHCGVHINA 419 (636)
Q Consensus 396 vi~IT~~~~s~La~~ad~~l~~~~ 419 (636)
||+|.+. ++++. ..|+.|+.+.
T Consensus 137 ~Ial~DT-n~~p~-~Vd~~IP~Nd 158 (202)
T 3j20_B 137 IVALVDT-ENLLS-YVDLAIPTNN 158 (202)
T ss_dssp EEEEECT-TCCCT-TCCEEEECCC
T ss_pred EEEEEcC-CCCcc-ccCEEEeCCC
Confidence 9999987 55554 4788876643
No 109
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=74.32 E-value=70 Score=33.66 Aligned_cols=76 Identities=12% Similarity=0.118 Sum_probs=42.7
Q ss_pred CCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEeecc---chh---------cccC-----CCCCCcEEEEEcCCCCCHH
Q 006659 319 SRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIAS---DLV---------DRQA-----PIYREDTAVFVSQSGETAD 381 (636)
Q Consensus 319 ~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~---e~~---------~~~~-----~~~~~dlvI~iS~SG~t~e 381 (636)
.++|+++|.|.+. .....++.+. +-.+.+..+. ++. +... .+..-++||+ .+|....
T Consensus 12 ~~~vlVvGgG~va---~~k~~~L~~~-ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~--at~~~~~ 85 (457)
T 1pjq_A 12 DRDCLIVGGGDVA---ERKARLLLEA-GARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIA--ATDDDTV 85 (457)
T ss_dssp TCEEEEECCSHHH---HHHHHHHHHT-TBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEE--CCSCHHH
T ss_pred CCEEEEECCCHHH---HHHHHHHHhC-cCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEE--cCCCHHH
Confidence 5899999999884 4444445443 4444444432 110 0001 1222344444 4565555
Q ss_pred HHHHHHHHHHcCCeEEEEE
Q 006659 382 TLQALEYASENGALCVGIT 400 (636)
Q Consensus 382 ~i~al~~ak~~g~~vi~IT 400 (636)
.....+.|+++|+++-.++
T Consensus 86 n~~i~~~a~~~~i~vn~~d 104 (457)
T 1pjq_A 86 NQRVSDAAESRRIFCNVVD 104 (457)
T ss_dssp HHHHHHHHHHTTCEEEETT
T ss_pred HHHHHHHHHHcCCEEEECC
Confidence 7788889999999854443
No 110
>1kqf_A FDH-N alpha, formate dehydrogenase, nitrate-inducible, major S; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1kqg_A*
Probab=71.08 E-value=20 Score=42.16 Aligned_cols=55 Identities=13% Similarity=0.076 Sum_probs=36.0
Q ss_pred CCcEEEEEcCCC-C-CHHHHHHHHHHH-HcCCeEEEEEcCCCCccccccCeeEEcCCCC
Q 006659 366 REDTAVFVSQSG-E-TADTLQALEYAS-ENGALCVGITNTVGSAIARKTHCGVHINAGA 421 (636)
Q Consensus 366 ~~dlvI~iS~SG-~-t~e~i~al~~ak-~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~ 421 (636)
.-|++|++...- + .+-....+..|+ ++|+++|.|-.. .+..++.||..|.+..|.
T Consensus 222 ~ad~il~~G~N~~~~~p~~~~~i~~a~~~~GaklivIDPr-~t~ta~~AD~~l~irPGT 279 (1015)
T 1kqf_A 222 NANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIVVDPR-FTRTASVADIYAPIRSGT 279 (1015)
T ss_dssp GCSEEEEESCCHHHHSTTTTHHHHHHHHHSCCEEEEECSS-CCHHHHTCSEEECCCTTC
T ss_pred hCCEEEEECCChhhhCchHHHHHHHHHHHCCCeEEEEeCC-CCchhHhhCeeeccCCCc
Confidence 456676664221 1 111224556777 899999999775 677889999988775543
No 111
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=68.64 E-value=7.2 Score=47.07 Aligned_cols=41 Identities=24% Similarity=0.385 Sum_probs=33.2
Q ss_pred ceEEEEEecccccchhhHHHHHHHHHHhccccC--------CCCcCeeEe
Q 006659 2 CGIFAYLNYGVNRERRYILQVLFNGLRRLEYRG--------YDSAGICID 43 (636)
Q Consensus 2 cGI~g~~~~~~~~~~~~~~~~l~~~l~~l~~RG--------~d~~Gi~~~ 43 (636)
|||.++.+.++.++. +.....+.+|..|.||| -|++||.+.
T Consensus 1 CGvg~va~~~G~~sh-~iv~~al~~L~~m~HRG~~~ad~~tGDGaGil~~ 49 (1520)
T 1ofd_A 1 CGVGFIANLRGKPDH-TLVEQALKALGCMEHRGGCSADNDSGDGAGVMTA 49 (1520)
T ss_dssp CEEEEEECSSSCCBS-HHHHHHHHHHHHTGGGSCBCTTSSSBSCEEEEEE
T ss_pred CeEEEEEEcCCCccH-HHHHHHHHHHHhccccCcccCCCCCCCceeeecc
Confidence 999999888765443 46677889999999999 688888865
No 112
>2vpz_A Thiosulfate reductase; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_A* 2vpw_A* 2vpy_A*
Probab=67.64 E-value=13 Score=42.34 Aligned_cols=124 Identities=20% Similarity=0.237 Sum_probs=69.2
Q ss_pred CCCcEEEEEc-CCCCC-H-HHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCcccccchhhHHHHHHHHHHH
Q 006659 365 YREDTAVFVS-QSGET-A-DTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAEIGVASTKAYTSQIVVMAML 441 (636)
Q Consensus 365 ~~~dlvI~iS-~SG~t-~-e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e~~~~~t~s~~~~~~~l~lL 441 (636)
..-|++|++. ....+ + -....++.++++|+++|.|-.. .+..++.||..|.+..|.+. . +++.++
T Consensus 198 ~~ad~il~~G~n~~~~~p~~~~~~~~~a~~~G~klividPr-~t~ta~~Ad~~l~irPGtD~-------a----l~~al~ 265 (765)
T 2vpz_A 198 ENARYIVLIGHHIGEDTHNTQLQDFALALKNGAKVVVVDPR-FSTAAAKAHRWLPIKPGTDT-------A----LLLAWI 265 (765)
T ss_dssp GGCSEEEEESCCBTTBCCHHHHHHHHHHHHTTCEEEEECSB-CCTTGGGCSEEECCCTTCHH-------H----HHHHHH
T ss_pred ccCCEEEEEeCChhhcCChHHHHHHHHHHHCCCEEEEECCC-CCcchhhCCeEeCCCCCcHH-------H----HHHHHH
Confidence 3445666653 33332 2 5667788899999999999776 67888999999877554332 1 111122
Q ss_pred HHHHhcCCCCcHHHHHH-------HHHHHhh-hHHHHHHHHhc-hHHHHHHHHHhc-CC-CeEEEEeCCCC
Q 006659 442 ALAIGGDTISTQARREA-------IIDGLCD-LPNKVREVLKL-DQEMKVLAKQLI-AE-QSLLVFGRGYN 501 (636)
Q Consensus 442 ~~~~~~~~~~~~~~~~~-------~~~~l~~-l~~~~~~~~~~-~~~~~~~a~~l~-~~-~~~~~lG~G~~ 501 (636)
-..+... ..+.+.+++ +.+.+.. -|+.+.+.--. .+.++++|+.+. .. +.+++.|.|..
T Consensus 266 ~~ii~~~-l~D~~fi~~~t~gf~~l~~~v~~~tpe~~a~itGv~~~~I~~lA~~~a~~a~~~~i~~g~g~~ 335 (765)
T 2vpz_A 266 HVLIYED-LYDKEYVAKYTVGFEELKAHVKDFTPEWAEKHTEIPAQVIREVAREMAAHKPRAVLPPTRHNV 335 (765)
T ss_dssp HHHHHTT-CSCHHHHHHHEECCHHHHHHTSSCCHHHHHHHHCSCHHHHHHHHHHHHTTTTSEECCCCSCCC
T ss_pred HHHHHcC-CcCHHHHHHHccHHHHHHHHhhcCCHHHHHHHHCcCHHHHHHHHHHHHhhCCCEEEEcccccc
Confidence 2222221 112222222 2222222 24444443333 677889999987 54 45666788743
No 113
>1eu1_A Dimethyl sulfoxide reductase; molybdenum, molybdenum cofactor, DMSO, molybdopte oxidoreductase; HET: GLC MGD EPE; 1.30A {Rhodobacter sphaeroides} SCOP: b.52.2.2 c.81.1.1 PDB: 4dmr_A* 1dmr_A* 1e5v_A* 1h5n_A* 2dmr_A* 3dmr_A* 1e61_A* 1e60_A* 1e18_A* 1dms_A*
Probab=66.24 E-value=25 Score=39.92 Aligned_cols=121 Identities=14% Similarity=0.158 Sum_probs=66.7
Q ss_pred HHHHHHHHHcCCeEEEEEcCCCCcccccc-CeeEEcCCCCcccccchhhHHHHHHHHHHHHHHHhcCCCCcHHHHH----
Q 006659 383 LQALEYASENGALCVGITNTVGSAIARKT-HCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISTQARRE---- 457 (636)
Q Consensus 383 i~al~~ak~~g~~vi~IT~~~~s~La~~a-d~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~~~~~~~---- 457 (636)
...++.++++|+++|+|-.. .+..++.+ |..|.+..|.+. . +++.++-..+... ..+.+.++
T Consensus 204 ~~~l~~a~~~G~klivIDPr-~t~ta~~aad~~l~irPGtD~-------A----L~~am~~~ii~e~-l~D~~fi~~~t~ 270 (780)
T 1eu1_A 204 YAGMKALKEKGTRVIAINPV-RTETADYFGADVVSPRPQTDV-------A----LMLGMAHTLYSED-LHDKDFLENCTT 270 (780)
T ss_dssp HHHHHHHHHHTCEEEEESSB-CCHHHHHHTCEEECCCTTCHH-------H----HHHHHHHHHHHTT-CSCHHHHHHHEE
T ss_pred HHHHHHHHHCCCeEEEECCC-CCCcccccCCEEeeeCCCCHH-------H----HHHHHHHHHHHCC-CccHHHHHHhhh
Confidence 35677888999999999776 56667765 998877654332 1 1111222222221 11222222
Q ss_pred ---HHHHHHh-------hhHHHHHHHHhc-hHHHHHHHHHhcCCCeEEEEeCCCC---HHH-HHHHHHHHHHhc
Q 006659 458 ---AIIDGLC-------DLPNKVREVLKL-DQEMKVLAKQLIAEQSLLVFGRGYN---YAT-ALEGALKVKEVA 516 (636)
Q Consensus 458 ---~~~~~l~-------~l~~~~~~~~~~-~~~~~~~a~~l~~~~~~~~lG~G~~---~~~-A~e~alKl~E~~ 516 (636)
++.+.+. .-|+.+.++-.. .+.++++|+.+...+.+++.|.|.. .|. +..+...|.-++
T Consensus 271 Gfe~~~~~v~~~~dg~~~tpe~aa~itGv~~~~I~~~A~~~a~~~~~i~~g~g~~~~~~g~~~~~ai~~L~~lt 344 (780)
T 1eu1_A 271 GFDLFAAYLTGESDGTPKTAEWAAEICGLPAEQIRELARSFVAGRTMLAAGWSIQRMHHGEQAHWMLVTLASMI 344 (780)
T ss_dssp CHHHHHHHHTTTTTSCCCCHHHHHHHHCSCHHHHHHHHHHHHSSCEEEEECSGGGSSTTTHHHHHHHHHHHHHH
T ss_pred cHHHHHHHhcCCcCCCcCCHHHHHHHHCcCHHHHHHHHHHHHhcCCEEEeechHhHHhhhHHHHHHHHHHHHHh
Confidence 2223332 224444443333 6778999999987778888888843 232 234444454444
No 114
>2ivf_A Ethylbenzene dehydrogenase alpha-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=63.77 E-value=43 Score=39.13 Aligned_cols=56 Identities=14% Similarity=0.127 Sum_probs=37.6
Q ss_pred CCcEEEEEcCC-CC-CHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCCCCc
Q 006659 366 REDTAVFVSQS-GE-TADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINAGAE 422 (636)
Q Consensus 366 ~~dlvI~iS~S-G~-t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~e 422 (636)
.-+++|++... .. .+-....+..||++|+++|+|-.. -+..++.||..|.+..|.+
T Consensus 246 nad~Il~~G~N~~~~~p~~~~~~~~ar~~GakvivVDPr-~t~ta~~AD~wl~irPGTD 303 (976)
T 2ivf_A 246 DAELIFMTCSNWSYTYPSSYHFLSEARYKGAEVVVIAPD-FNPTTPAADLHVPVRVGSD 303 (976)
T ss_dssp GCSEEEEESCCHHHHCTTTHHHHHHHHHHTCEEEEECSS-CCTTGGGCSEEECCCTTCH
T ss_pred hCcEEEEeCCChhHcccHHHHHHHHHHHcCCEEEEECCC-CCcchhhcCeEeccCCCcH
Confidence 44666666321 11 112345677888999999999876 6777889999988866443
No 115
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=62.60 E-value=12 Score=45.23 Aligned_cols=41 Identities=24% Similarity=0.357 Sum_probs=33.2
Q ss_pred ceEEEEEecccccchhhHHHHHHHHHHhccccCC--------CCcCeeEe
Q 006659 2 CGIFAYLNYGVNRERRYILQVLFNGLRRLEYRGY--------DSAGICID 43 (636)
Q Consensus 2 cGI~g~~~~~~~~~~~~~~~~l~~~l~~l~~RG~--------d~~Gi~~~ 43 (636)
|||.++.+.++.++. +.....+.+|..|.|||- |++||.+.
T Consensus 1 CGvg~va~~~G~~sh-~~v~~al~aL~~m~HRG~~~ad~~tGDGaGil~~ 49 (1479)
T 1ea0_A 1 CGVGFIAAIDGKPRR-SVVEKGIEALKAVWHRGAVDADGKTGDGAGIHVA 49 (1479)
T ss_dssp CEECEEEETTCCCBH-HHHHHHHHHHTSCGGGSCCCTTSSCCSCBCEEEE
T ss_pred CeEEEEEEcCCCccH-HHHHHHHHHHHhccccCccCCCCCCCCceeeecc
Confidence 999999988765443 456778899999999994 88898865
No 116
>1ti6_A Pyrogallol hydroxytransferase large subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.52.2.2 c.81.1.1 PDB: 1ti2_A* 1ti4_A* 1vld_M* 1vle_M* 1vlf_M*
Probab=56.06 E-value=41 Score=38.71 Aligned_cols=93 Identities=17% Similarity=0.062 Sum_probs=51.6
Q ss_pred HHHcCCeEEEEEcCCCCccccc-cCeeEEcCCCCcccccchhhHHHHHHHHHHHHHHHhcCCCCcHHH-------HHHHH
Q 006659 389 ASENGALCVGITNTVGSAIARK-THCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISTQAR-------REAII 460 (636)
Q Consensus 389 ak~~g~~vi~IT~~~~s~La~~-ad~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~~~~~-------~~~~~ 460 (636)
++++|+++|+|-.. .++.++. ||..|.+..|.+. . +++.++-..+... ..+.+. ++++.
T Consensus 238 a~~~G~klivIDPr-~t~ta~~~Ad~~l~irPGTD~-------a----L~~am~~~ii~e~-l~D~~fi~~~t~Gf~~~~ 304 (875)
T 1ti6_A 238 LKDLGVDFVFIDPH-MNHTARLVADKWFSPKIGTDH-------A----LSFAIAYTWLKED-SYDKEYVAANAHGFEEWA 304 (875)
T ss_dssp HHHTTCEEEEECSB-CCHHHHHHCSEEECCCTTCHH-------H----HHHHHHHHHHHTT-CSCHHHHHHHEESHHHHH
T ss_pred HHHcCCeEEEECCC-CCCcccccCCEEeccCCCcHH-------H----HHHHHHHHHHHcc-chhHHHHHhhhccHHHHH
Confidence 88899999999876 5667775 7998887654332 1 1112222222221 112222 22233
Q ss_pred HHHh-------hhHHHHHHHHhc-hHHHHHHHHHhcCCCeEE
Q 006659 461 DGLC-------DLPNKVREVLKL-DQEMKVLAKQLIAEQSLL 494 (636)
Q Consensus 461 ~~l~-------~l~~~~~~~~~~-~~~~~~~a~~l~~~~~~~ 494 (636)
+.+. .-|+.+.++--. .+.++++|+.+...+.++
T Consensus 305 ~~v~~~~dG~~~tpe~aa~itGv~~~~I~~lA~~~a~~~~~i 346 (875)
T 1ti6_A 305 DYVLGKTDGTPKTCEWAEEESGVPACEIRALARQWAKKNTYL 346 (875)
T ss_dssp HHHTTTTTSCCCCHHHHHHHHCSCHHHHHHHHHHHHHSCEEE
T ss_pred HHhcccccCCcCCHHHHHHHHCcCHHHHHHHHHHHHhcCCee
Confidence 3333 234554444333 677889999887666555
No 117
>1tmo_A TMAO reductase, trimethylamine N-oxide reductase; oxidoreductase, oxotransferase, molybdoenzyme, MO-cofactor, molybdenum; HET: 2MD; 2.50A {Shewanella massilia} SCOP: b.52.2.2 c.81.1.1
Probab=53.94 E-value=39 Score=38.62 Aligned_cols=105 Identities=13% Similarity=0.173 Sum_probs=58.6
Q ss_pred HHHHHHHHH---cCC-eEEEEEcCCCCcccccc-CeeEEcCCCCcccccchhhHHHHHHHHHHHHHHHhcCCCCcHHHH-
Q 006659 383 LQALEYASE---NGA-LCVGITNTVGSAIARKT-HCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISTQARR- 456 (636)
Q Consensus 383 i~al~~ak~---~g~-~vi~IT~~~~s~La~~a-d~~l~~~~~~e~~~~~t~s~~~~~~~l~lL~~~~~~~~~~~~~~~- 456 (636)
...++.+++ +|+ ++|+|-.. .+..++.| |..|.+..|.+. . +++.++-..+... ..+.+.+
T Consensus 237 ~~~~~~a~~~~~~G~~klivIDPr-~t~ta~~a~d~~l~irPGtD~-------a----l~~a~~~~ii~e~-l~D~~fi~ 303 (829)
T 1tmo_A 237 FAYLAQLKEKVKQGKIRVISIDPV-VTKTQAYLGCEQLYVNPQTDV-------T----LMLAIAHEMISKK-LYDDKFIQ 303 (829)
T ss_dssp HHHHHHHHHHHHHTSSEEEEECSS-CCHHHHHHTCEEECCCTTCHH-------H----HHHHHHHHHHHTT-CSCHHHHH
T ss_pred HHHHHHHHHHhhCCCceEEEECCC-CCCcchhhcCEEecccCCCHH-------H----HHHHHHHHHHHCC-cccHHHHH
Confidence 345667777 899 99999765 67788888 988877554332 1 1111222222221 1122222
Q ss_pred ------HHHHHHHh-------hhHHHHHHHHhc-hHHHHHHHHHhcCCCeEEEEeCCC
Q 006659 457 ------EAIIDGLC-------DLPNKVREVLKL-DQEMKVLAKQLIAEQSLLVFGRGY 500 (636)
Q Consensus 457 ------~~~~~~l~-------~l~~~~~~~~~~-~~~~~~~a~~l~~~~~~~~lG~G~ 500 (636)
+++.+.+. .-|+.+.++--. .+.++++|+.+...+.+++.|.|.
T Consensus 304 ~~t~gf~~~~~~v~~~~dg~~~tpe~aa~itGv~~~~I~~~A~~~a~~~~~i~~g~g~ 361 (829)
T 1tmo_A 304 GYSLGFEEFVPYVMGTKDGVAKTPEWAAPICGVEAHVIRDLAKTLVKGRTQFMMGWCI 361 (829)
T ss_dssp HHEECHHHHHHHHHTTTTSCCCCHHHHHHHHTCCHHHHHHHHHHHHHSCEEEEECSGG
T ss_pred HhcccHHHHHHHhcCCCCCCcCCHHHHHHHHCcCHHHHHHHHHHHhcCCCEEEeccch
Confidence 22222222 234444443333 567888898887667888888873
No 118
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=49.20 E-value=39 Score=32.01 Aligned_cols=46 Identities=17% Similarity=0.166 Sum_probs=33.0
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEc
Q 006659 366 REDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHI 417 (636)
Q Consensus 366 ~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~ 417 (636)
..|++|++...-+ -.++++|+..|+|||+|.++ +++.. ..|+.|+.
T Consensus 157 ~Pdll~v~Dp~~e----~~ai~EA~~l~IPvIaivDT-n~dp~-~Vdy~IP~ 202 (231)
T 3bbn_B 157 LPDIVIIVDQQEE----YTALRECITLGIPTICLIDT-NCNPD-LADISIPA 202 (231)
T ss_dssp CCSEEEESCTTTT----HHHHHHHHTTTCCEEECCCS-SSCCS-SCSEECCC
T ss_pred CCCEEEEeCCccc----cHHHHHHHHhCCCEEEEecC-CCCcc-ceeEEeeC
Confidence 4578887754332 47888999999999999987 55543 56776644
No 119
>2cxn_A Glucose-6-phosphate isomerase; 1.40A {Mus musculus} PDB: 2cvp_A 2cxo_A* 2cxp_A* 2cxq_A* 2cxr_A* 2cxs_A* 2cxt_A* 2cxu_A 1u0e_A 1u0f_A* 1u0g_A* 1jiq_A 1iri_A 1nuh_A* 1jlh_A 1iat_A 1hm5_A 1g98_A 1hox_A* 1xtb_A* ...
Probab=47.67 E-value=40 Score=36.45 Aligned_cols=104 Identities=12% Similarity=0.060 Sum_probs=53.1
Q ss_pred CCeEEEEeCCCCHHHHHHHHHHHHHhc--ccccc--ccccccccccccccccCCCCeEEEEe-CCcchHHHHHHHHHHH-
Q 006659 490 EQSLLVFGRGYNYATALEGALKVKEVA--LMHSE--GILAGEMKHGPLALVDENLPILVIAT-RDACFSKQQSVIQQLH- 563 (636)
Q Consensus 490 ~~~~~~lG~G~~~~~A~e~alKl~E~~--~~~a~--~~~~~Ef~HGp~~~~~~~~~vi~l~~-~~~~~~~~~~~~~~~~- 563 (636)
.+.+++||-|-++--++-...-+..-. .++.. ...-+++.+--+..+++.+.+|++.+ .+.+.|-+ ...+.++
T Consensus 149 i~~VV~IGIGGS~LGp~~v~~aL~~~~~~~~~v~fvsNvDp~~i~~~l~~L~~e~TLvIViSKSGtT~ETl-~na~~ar~ 227 (557)
T 2cxn_A 149 ITDIINIGIGGSDLGPLMVTEALKPYSKGGPRVWFVSNIDGTHIAKTLASLSPETSLFIIASKTFTTQETI-TNAETAKE 227 (557)
T ss_dssp CCEEEEECCGGGTHHHHHHHHHTGGGGTTSCEEEEECCSSHHHHHHHHTTCCTTTEEEEEECSSSCCHHHH-HHHHHHHH
T ss_pred cceEEEEeccchHHHHHHHHHHHhhhccCCCeEEEEecCCHHHHHHHHhcCCCCcEEEEEEcCCCCChhHH-HHHHHHHH
Confidence 689999998866544443222222211 12222 22234666666666766666666666 34454433 2222222
Q ss_pred ---hc-C------CeEEEEecCCCCcCCCCCCcceEEEcCC
Q 006659 564 ---AR-K------GRLIVMCSKGDAASIFPGGSCRVIEVPQ 594 (636)
Q Consensus 564 ---~~-g------~~v~vi~~~~~~~~~~~~~~~~~~~~p~ 594 (636)
+. | .+++++++.+.......-.....|.+|.
T Consensus 228 ~l~~~~G~~~~~~~h~VavTt~~s~~~~~gi~~~~~F~~~d 268 (557)
T 2cxn_A 228 WFLEAAKDPSAVAKHFVALSTNTAKVKEFGIDPQNMFEFWD 268 (557)
T ss_dssp HHHHHHCCGGGGGGTEEEEESCHHHHHHHTCCGGGEEECCT
T ss_pred HHHHhcCccchhcCEEEEEeCCcHHHHHcCCCcccEEEeec
Confidence 23 4 5789998875321110001125788883
No 120
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=46.16 E-value=31 Score=33.25 Aligned_cols=46 Identities=15% Similarity=0.018 Sum_probs=33.4
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEc
Q 006659 366 REDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHI 417 (636)
Q Consensus 366 ~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~ 417 (636)
..|++|++...-+ -.++++|+..|++||+|.+. +++.. ..|+.|+.
T Consensus 158 ~Pdll~V~Dp~~e----~~Ai~EA~~l~IPvIaivDT-n~dp~-~VdypIP~ 203 (256)
T 2vqe_B 158 LPDAIFVVDPTKE----AIAVREARKLFIPVIALADT-DSDPD-LVDYIIPG 203 (256)
T ss_dssp CCSEEEESCTTTT----HHHHHHHHHTTCCCEECCCT-TSCGG-GCSEECCS
T ss_pred CCCEEEEeCCccc----hHHHHHHHHcCCCEEEEecC-CCCch-hcceEeec
Confidence 4568887764432 46888999999999999987 55544 56776644
No 121
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=45.88 E-value=32 Score=34.73 Aligned_cols=40 Identities=10% Similarity=0.023 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEcCC
Q 006659 380 ADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHINA 419 (636)
Q Consensus 380 ~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~~~ 419 (636)
..-.+++..||+.|.+++++..+++++-.++||..+.++.
T Consensus 11 ~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~~aD~~~~~~~ 50 (363)
T 4ffl_A 11 LQGFEAAYLSKKAGMKVVLVDKNPQALIRNYADEFYCFDV 50 (363)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCTTCTTTTTSSEEEECCT
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCCChhHhhCCEEEECCC
Confidence 3456788899999999999999999999999998776643
No 122
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=44.55 E-value=17 Score=32.49 Aligned_cols=50 Identities=16% Similarity=0.105 Sum_probs=38.6
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHc-CCeEEEEEcC--CCCccccccCeeEEcC
Q 006659 366 REDTAVFVSQSGETADTLQALEYASEN-GALCVGITNT--VGSAIARKTHCGVHIN 418 (636)
Q Consensus 366 ~~dlvI~iS~SG~t~e~i~al~~ak~~-g~~vi~IT~~--~~s~La~~ad~~l~~~ 418 (636)
.-|.+|++|.-| +-..+++.++++ |.+|+++.-. ....|.+.||..+.+.
T Consensus 108 ~~d~~vLvSgD~---DF~plv~~lr~~~G~~V~v~g~~~~~s~~L~~~ad~fi~l~ 160 (165)
T 2qip_A 108 DVDRVILVSGDG---DFSLLVERIQQRYNKKVTVYGVPRLTSQTLIDCADNFVAID 160 (165)
T ss_dssp GCSEEEEECCCG---GGHHHHHHHHHHHCCEEEEEECGGGSCHHHHHHSSEEEECS
T ss_pred cCCEEEEEECCh---hHHHHHHHHHHHcCcEEEEEeCCCcChHHHHHhCCEEEecc
Confidence 457788887655 777888899996 9999999854 2456888999888774
No 123
>1b0z_A Protein (phosphoglucose isomerase); autocrinefactor, neuroleukin, crystallography motility; 2.30A {Geobacillus stearothermophilus} SCOP: c.80.1.2 PDB: 1c7q_A* 1c7r_A* 2pgi_A
Probab=43.90 E-value=30 Score=36.40 Aligned_cols=99 Identities=11% Similarity=0.100 Sum_probs=52.2
Q ss_pred HHHHHHHHHhc-CCCeEEEEeCCCCHHHHHHHHHHHHHhcc------cccccc---ccccccccccccccCCCCeEEEEe
Q 006659 478 QEMKVLAKQLI-AEQSLLVFGRGYNYATALEGALKVKEVAL------MHSEGI---LAGEMKHGPLALVDENLPILVIAT 547 (636)
Q Consensus 478 ~~~~~~a~~l~-~~~~~~~lG~G~~~~~A~e~alKl~E~~~------~~a~~~---~~~Ef~HGp~~~~~~~~~vi~l~~ 547 (636)
+++++++++++ ..+.++++|-|-++--++-..--+....+ .+...+ .-+++.+.....+++.+.+|++.+
T Consensus 59 ~~i~~~a~~v~~~~~~VV~IGIGGS~LG~~~v~~aL~~~~~~~~~~~~~~~fv~~NvDp~~i~~~l~~l~~~~TlviviS 138 (445)
T 1b0z_A 59 SRIKQAAERIRNHSDALVVIGIGGSYLGARAAIEALSHTFHNQMNDTTQIYFAGQNISSTYISHLLDVLEGKDLSINVIS 138 (445)
T ss_dssp HHHHHHHHHHHHHCSEEEEECCGGGTHHHHHHHHHHSCTTGGGSTTSCEEEEESSSCCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHHHHhcCCEEEEEecChhHHHHHHHHHHHhhhcccccccCCceEEEeCCCCHHHHHHHHhhCCcCcEEEEEEe
Confidence 44555665553 56899999999876555433322322211 111111 122444555555666566666665
Q ss_pred -CCcchHHHHHHHHHHH-----hcC-----CeEEEEecCCC
Q 006659 548 -RDACFSKQQSVIQQLH-----ARK-----GRLIVMCSKGD 577 (636)
Q Consensus 548 -~~~~~~~~~~~~~~~~-----~~g-----~~v~vi~~~~~ 577 (636)
.+.+.|-+. ..+.++ ..| .++++||+...
T Consensus 139 KSGtT~ET~~-~~~~ar~~l~~~~G~~~~~~~~vavT~~~~ 178 (445)
T 1b0z_A 139 KSGTTTEPAI-AFRIFRDYMEKKYGKEEARKRIYVTTDRTK 178 (445)
T ss_dssp SSSCCHHHHH-HHHHHHHHHHHHHCHHHHGGGEEEEECSSC
T ss_pred CCCCCHHHHH-HHHHHHHHHHHhcCchhhcCEEEEEecCCc
Confidence 444544332 222222 235 78999998765
No 124
>2wu8_A Glucose-6-phosphate isomerase; gluconeogenesis, 5-phosphoarabinonate (PAB), PGI, cytoplasm, glycolysis; 2.25A {Mycobacterium tuberculosis}
Probab=41.75 E-value=35 Score=36.83 Aligned_cols=26 Identities=27% Similarity=0.147 Sum_probs=18.9
Q ss_pred CcEEEEEcCCCCCHHHHHHHH-HHHHc
Q 006659 367 EDTAVFVSQSGETADTLQALE-YASEN 392 (636)
Q Consensus 367 ~dlvI~iS~SG~t~e~i~al~-~ak~~ 392 (636)
.++.+=.|...-|.++++++. .|++.
T Consensus 43 ~~~~~D~sk~~i~~~~~~~l~~la~~~ 69 (549)
T 2wu8_A 43 GDLYIDYSKHRVTRETLALLIDLARTA 69 (549)
T ss_dssp TTEEEECCSSSCCHHHHHHHHHHHHHT
T ss_pred CCEEEEcCCCCCCHHHHHHHHHHHHhc
Confidence 467777888888999988776 34443
No 125
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=38.26 E-value=62 Score=36.72 Aligned_cols=112 Identities=9% Similarity=0.000 Sum_probs=60.4
Q ss_pred cchHHHHHHHcCC--CeEEEEeechhH-HHHHHHHHHHHHhcCCcEEEeeccch----hcccC---CCCCCcEEEEEcCC
Q 006659 307 GGLKDHLKTIRRS--RRIVFIGCGTSY-NAALAARPILEELSDLPVTMEIASDL----VDRQA---PIYREDTAVFVSQS 376 (636)
Q Consensus 307 ~~l~~~~~~l~~~--~~I~i~G~G~S~-~aa~~~~~~~~~~~~~~~~~~~~~e~----~~~~~---~~~~~dlvI~iS~S 376 (636)
+.++.+++.|+.+ +.|.+++.+.+. -.+..++.+++.+ |....-...... ..... .+..-|++|++. .
T Consensus 324 eAl~~ia~~L~~i~~~~i~~~~s~~~t~E~~~~~~kl~~~l-Gt~n~d~~~~~~~~~~~~~~~~~~di~~ad~Il~~G-N 401 (783)
T 3i9v_3 324 EAFLALKEGLKEARGEEVGLYLAHDATLEEGLLASELAKAL-KTPHLDFQGRTAAPASLFPPASLEDLLQADFALVLG-D 401 (783)
T ss_dssp HHHHHHHHHHHTCCTTSEEEEECTTCCTTHHHHHHHHHHHT-TCSCEEETTCCSSCGGGSCBCCHHHHHHCSCEEEES-C
T ss_pred HHHHHHHHHHHhhccCCEEEEECCCCCHHHHHHHHHHHHHh-CCCcccCCchhhhhhccCCCCCHHHHhhCCEEEEeC-C
Confidence 4556677777665 467777766432 2334456666664 432221111100 00000 122346666665 2
Q ss_pred C--CCHHHHHHHHHHH-------------------------HcCCeEEEEEcCCCCccccccCeeEEcCCCC
Q 006659 377 G--ETADTLQALEYAS-------------------------ENGALCVGITNTVGSAIARKTHCGVHINAGA 421 (636)
Q Consensus 377 G--~t~e~i~al~~ak-------------------------~~g~~vi~IT~~~~s~La~~ad~~l~~~~~~ 421 (636)
- +.+-....++.+. ++|+++|.|-.. .+++++.||..+.+..|.
T Consensus 402 p~~~~P~~~~rlr~a~~~~~~~~~~~~g~~~~~~~v~~~~~~~g~klividPr-~t~ta~~Ad~~l~i~PGt 472 (783)
T 3i9v_3 402 PTEEAPILHLRLSEFVRDLKPPHRYNHGTPFADLQIKERMPRRTDKMALFAPY-RAPLMKWAAIHEVHRPGE 472 (783)
T ss_dssp HHHHSTHHHHHHHHHHTTCCCCCCBTTBSCSSCTTCCTTCCCCTTSEEEEESS-CCGGGTTCSEEEECCSSC
T ss_pred hhHhCcHHHHHHHHHHHhcccchhhcccccchhhhhhhhhhcCCCEEEEEeCC-cchhhHhhcceEecCCCc
Confidence 1 1222233344443 578999999876 678999999998876543
No 126
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=34.83 E-value=47 Score=31.13 Aligned_cols=46 Identities=15% Similarity=0.088 Sum_probs=32.6
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEc
Q 006659 366 REDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHI 417 (636)
Q Consensus 366 ~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~ 417 (636)
..|++|++. ...--.++++|...|++||+|.++ +++. ...|+.|+.
T Consensus 149 ~Pdllvv~D----p~~e~~ai~Ea~~l~IP~IalvDT-n~~p-~~Vdy~IP~ 194 (218)
T 3r8n_B 149 LPDALFVID----ADHEHIAIKEANNLGIPVFAIVDT-NSDP-DGVDFVIPG 194 (218)
T ss_dssp CCCSCEEEE----TGGGHHHHHHHHHHTCCCEEECCS-SSCC-SSCSEECCS
T ss_pred CCCeEEecC----cccccHHHHHHHHhCCCEEEEEeC-cCCC-cccceEeec
Confidence 456777775 334457788999999999999987 4444 456776644
No 127
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=33.96 E-value=28 Score=32.87 Aligned_cols=67 Identities=10% Similarity=0.127 Sum_probs=40.2
Q ss_pred EEEEeechhHHHHHHHHHHHHHhcCCcEEEeeccch--hcccCCCCCCcEEEEEcCCCCCHHHHHHHHHHHH
Q 006659 322 IVFIGCGTSYNAALAARPILEELSDLPVTMEIASDL--VDRQAPIYREDTAVFVSQSGETADTLQALEYASE 391 (636)
Q Consensus 322 I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~e~--~~~~~~~~~~dlvI~iS~SG~t~e~i~al~~ak~ 391 (636)
++|.+.|.........+. . + .++++.+.+.-+. .+.+..++.++++|+||.+|.++-+-..++.--+
T Consensus 94 LVIaAT~d~~~N~~I~~~-a-k-~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~ie 162 (223)
T 3dfz_A 94 FIVVATNDQAVNKFVKQH-I-K-NDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTDGASPLLTKRIKEDLS 162 (223)
T ss_dssp EEEECCCCTHHHHHHHHH-S-C-TTCEEEC-----CCSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHH-H-h-CCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHHH
Confidence 566777776443333322 2 3 5777776655443 2234456789999999999999988777665433
No 128
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=33.16 E-value=1.5e+02 Score=29.40 Aligned_cols=74 Identities=18% Similarity=0.183 Sum_probs=40.6
Q ss_pred CCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEeeccch------h----------cccCCC--CCCcEEEEEc-CCCC
Q 006659 318 RSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIASDL------V----------DRQAPI--YREDTAVFVS-QSGE 378 (636)
Q Consensus 318 ~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~e~------~----------~~~~~~--~~~dlvI~iS-~SG~ 378 (636)
+.++|+|+|.|.+...+ ++.++.+ .|..+...+..+. + +....+ ..-|+||.-+ .+-+
T Consensus 3 ~~~~i~~iGiGg~Gms~--~A~~L~~-~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~~ 79 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGG--LAAIAKE-AGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKRG 79 (326)
T ss_dssp CCCEEEEESCCSHHHHH--HHHHHHH-TTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCCTT
T ss_pred CCcEEEEEEECHHHHHH--HHHHHHh-CCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcCCC
Confidence 35799999999996432 3344544 4666666654321 0 011112 1335555432 3334
Q ss_pred CHHHHHHHHHHHHcCCeEEE
Q 006659 379 TADTLQALEYASENGALCVG 398 (636)
Q Consensus 379 t~e~i~al~~ak~~g~~vi~ 398 (636)
+++ ++.|+++|++++.
T Consensus 80 ~p~----~~~a~~~gi~v~~ 95 (326)
T 3eag_A 80 MDV----VEAILNLGLPYIS 95 (326)
T ss_dssp CHH----HHHHHHTTCCEEE
T ss_pred CHH----HHHHHHcCCcEEe
Confidence 444 4567888888765
No 129
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=29.48 E-value=53 Score=25.35 Aligned_cols=44 Identities=18% Similarity=0.241 Sum_probs=34.9
Q ss_pred EEEEcCCCCC---HHHHHHHHHHHHcCCeEEEEEcCCCCccccccCe
Q 006659 370 AVFVSQSGET---ADTLQALEYASENGALCVGITNTVGSAIARKTHC 413 (636)
Q Consensus 370 vI~iS~SG~t---~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~ 413 (636)
|-+|...|+. ..+-+|++.|++.|...|-|..+...|..++-|+
T Consensus 16 Vrli~~~Ge~lGv~~~~eAl~~A~e~~LDLVevsp~a~PPVCkImDy 62 (78)
T 1tif_A 16 VRLIDQNGDQLGIKSKQEALEIAARRNLDLVLVAPNAKPPVCRIMDY 62 (78)
T ss_dssp EEEECTTSCEEEEEEHHHHHHHHHHTTCEEEEEETTSSSCEEEEECH
T ss_pred EEEECCCCcCCCcccHHHHHHHHHHcCCCEEEECCCCCCCEEEEecc
Confidence 3344555542 4567999999999999999999988999888775
No 130
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Probab=29.33 E-value=1.3e+02 Score=29.44 Aligned_cols=51 Identities=14% Similarity=0.163 Sum_probs=40.8
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccc-cccCeeEEc
Q 006659 366 REDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIA-RKTHCGVHI 417 (636)
Q Consensus 366 ~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La-~~ad~~l~~ 417 (636)
+-|++|++-.|+...-...+.+.|+++|+++|.|-.. .+++. ..+|+.|.-
T Consensus 216 ~aDllLviGTSl~V~Paa~l~~~a~~~g~~~v~IN~~-~t~~~~~~~d~~i~g 267 (290)
T 3u31_A 216 KCDLLLVIGTSSTVSTATNLCHFACKKKKKIVEINIS-KTYITNKMSDYHVCA 267 (290)
T ss_dssp HCSEEEEESCCSCSHHHHHHHHHHHHTTCCEEEEESS-CCTTTTTTCSEEEES
T ss_pred cCCEEEEECcCCcchhHHHHHHHHHHcCCEEEEECCC-CCCCCCccceEEEEC
Confidence 5689999999999999999999999999998888654 45554 357877654
No 131
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=26.46 E-value=98 Score=29.79 Aligned_cols=81 Identities=16% Similarity=0.129 Sum_probs=55.5
Q ss_pred CeEEEEeechhH-HHHHHHHHHHHHhcCCcEEEeeccchhcccCCCCCCcEEEEEcCCC--CCHHHHHHHHHHHHcCCeE
Q 006659 320 RRIVFIGCGTSY-NAALAARPILEELSDLPVTMEIASDLVDRQAPIYREDTAVFVSQSG--ETADTLQALEYASENGALC 396 (636)
Q Consensus 320 ~~I~i~G~G~S~-~aa~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~dlvI~iS~SG--~t~e~i~al~~ak~~g~~v 396 (636)
++|+|++ |+.+ ..+..+...++. .++.+......++......+.+-|++|...... -+++.+++++..-+.|.-.
T Consensus 5 ~~vLiV~-g~~~~~~a~~l~~aL~~-~g~~V~~i~~~~~~~~~~~L~~yDvIIl~d~~~~~l~~~~~~~L~~yV~~GGgL 82 (259)
T 3rht_A 5 TRVLYCG-DTSLETAAGYLAGLMTS-WQWEFDYIPSHVGLDVGELLAKQDLVILSDYPAERMTAQAIDQLVTMVKAGCGL 82 (259)
T ss_dssp -CEEEEE-SSCTTTTHHHHHHHHHH-TTCCCEEECTTSCBCSSHHHHTCSEEEEESCCGGGBCHHHHHHHHHHHHTTCEE
T ss_pred ceEEEEC-CCCchhHHHHHHHHHHh-CCceEEEecccccccChhHHhcCCEEEEcCCccccCCHHHHHHHHHHHHhCCeE
Confidence 5789996 5433 244566666665 478888877766532223456889999886554 4788888888888889988
Q ss_pred EEEEcC
Q 006659 397 VGITNT 402 (636)
Q Consensus 397 i~IT~~ 402 (636)
|.+.+.
T Consensus 83 i~~gG~ 88 (259)
T 3rht_A 83 VMLGGW 88 (259)
T ss_dssp EEECST
T ss_pred EEecCc
Confidence 888653
No 132
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=26.10 E-value=1.9e+02 Score=30.12 Aligned_cols=33 Identities=21% Similarity=0.301 Sum_probs=22.9
Q ss_pred CCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEeec
Q 006659 318 RSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIA 354 (636)
Q Consensus 318 ~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~ 354 (636)
..++|+++|.|.|..+ ++.++.+ .|..+...+.
T Consensus 8 ~~k~v~viG~G~sG~s---~A~~l~~-~G~~V~~~D~ 40 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEA---AARLLAK-LGAIVTVNDG 40 (451)
T ss_dssp TTCEEEEECCTTTHHH---HHHHHHH-TTCEEEEEES
T ss_pred CCCEEEEEeeCHHHHH---HHHHHHh-CCCEEEEEeC
Confidence 3589999999999764 3455555 3666666654
No 133
>2zxr_A Single-stranded DNA specific exonuclease RECJ; DNA repair, hydrolase; 2.15A {Thermus thermophilus} PDB: 2zxo_A 2zxp_A 1ir6_A
Probab=25.84 E-value=1.5e+02 Score=32.76 Aligned_cols=89 Identities=18% Similarity=0.054 Sum_probs=38.3
Q ss_pred hHHHHHHHcCCCeEEEEeech--hHHHHHHHHHHHHHhcCCcEEEeeccchh--c--ccCC----CCCCcEEEEEcCCCC
Q 006659 309 LKDHLKTIRRSRRIVFIGCGT--SYNAALAARPILEELSDLPVTMEIASDLV--D--RQAP----IYREDTAVFVSQSGE 378 (636)
Q Consensus 309 l~~~~~~l~~~~~I~i~G~G~--S~~aa~~~~~~~~~~~~~~~~~~~~~e~~--~--~~~~----~~~~dlvI~iS~SG~ 378 (636)
++++.+.|.+.++|+|+|-=. +..++..+..++.++ +..+.+..+..+. + .... ....+++|.+-.+-.
T Consensus 62 v~~i~~aI~~~ekI~I~GH~D~DGi~Saa~L~~~L~~l-G~~v~~~ip~r~~egygl~~~~I~~~~~~~~LIItVD~G~~ 140 (666)
T 2zxr_A 62 AALLEEALRQGKRIRVHGDYDADGLTGTAILVRGLAAL-GADVHPFIPHRLEEGYGVLMERVPEHLEASDLFLTVDCGIT 140 (666)
T ss_dssp HHHHHHHHHTTCEEEEECCSSHHHHHHHHHHHHHHHHT-TCEEEECCC--------------------CCEEEESCCC--
T ss_pred HHHHHHHHHcCCeEEEEeccCCchHHHHHHHHHHHHHc-CCcEEEecCCCCCccccCCHHHHHhhccCCCEEEEEcCCch
Confidence 455566778899999999842 233334455566664 5555554443321 0 0101 123467776654322
Q ss_pred CHHHHHHHHHHHHcCCeEEEEEcC
Q 006659 379 TADTLQALEYASENGALCVGITNT 402 (636)
Q Consensus 379 t~e~i~al~~ak~~g~~vi~IT~~ 402 (636)
+.+ . ++.+++.|..+|. |++
T Consensus 141 s~~--~-i~~a~~~g~~VIV-iDH 160 (666)
T 2zxr_A 141 NHA--E-LRELLENGVEVIV-TDH 160 (666)
T ss_dssp ---------------CEEEE-ECC
T ss_pred hhh--h-HHHHHhCCCCEEE-ECC
Confidence 222 2 4567788887665 553
No 134
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=25.46 E-value=1.3e+02 Score=31.87 Aligned_cols=86 Identities=19% Similarity=0.271 Sum_probs=46.0
Q ss_pred HcCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEeeccch-----h----------cccCCCCCCcEEEEE-cCCCCC
Q 006659 316 IRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIASDL-----V----------DRQAPIYREDTAVFV-SQSGET 379 (636)
Q Consensus 316 l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~e~-----~----------~~~~~~~~~dlvI~i-S~SG~t 379 (636)
..+.++|+|+|.|.|...+ ++.++.+ .|..+...+..+- + +....+..-|+||.- ..+-.+
T Consensus 19 ~~~~~~v~viGiG~sG~s~--~A~~l~~-~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~~~d~vV~Spgi~~~~ 95 (494)
T 4hv4_A 19 MRRVRHIHFVGIGGAGMGG--IAEVLAN-EGYQISGSDLAPNSVTQHLTALGAQIYFHHRPENVLDASVVVVSTAISADN 95 (494)
T ss_dssp ---CCEEEEETTTSTTHHH--HHHHHHH-TTCEEEEECSSCCHHHHHHHHTTCEEESSCCGGGGTTCSEEEECTTSCTTC
T ss_pred hccCCEEEEEEEcHhhHHH--HHHHHHh-CCCeEEEEECCCCHHHHHHHHCCCEEECCCCHHHcCCCCEEEECCCCCCCC
Confidence 4567899999999997543 2344444 3666665553211 0 111123344655543 245567
Q ss_pred HHHHHHHH----------HHHH--cCCeEEEEEcCCC
Q 006659 380 ADTLQALE----------YASE--NGALCVGITNTVG 404 (636)
Q Consensus 380 ~e~i~al~----------~ak~--~g~~vi~IT~~~~ 404 (636)
+++..+.+ .+.+ ++.++|+||++.+
T Consensus 96 p~~~~a~~~gi~v~~~~e~l~~~~~~~~~IaVTGTnG 132 (494)
T 4hv4_A 96 PEIVAAREARIPVIRRAEMLAELMRYRHGIAVAGTHG 132 (494)
T ss_dssp HHHHHHHHTTCCEEEHHHHHHHHHTTSEEEEEECSSS
T ss_pred HHHHHHHHCCCCEEcHHHHHHHHhcCCCEEEEecCCC
Confidence 77665533 1111 3457999998744
No 135
>2o2c_A GPI, glucose-6-phosphate isomerase, glycosomal, PGI, phosphohexose; dimer; HET: G6Q; 1.58A {Trypanosoma brucei brucei} PDB: 2o2d_A* 1q50_A
Probab=25.34 E-value=67 Score=35.06 Aligned_cols=28 Identities=25% Similarity=0.070 Sum_probs=20.7
Q ss_pred CCcEEEEEcCCCCCHHHHHHHH-HHHHcC
Q 006659 366 REDTAVFVSQSGETADTLQALE-YASENG 393 (636)
Q Consensus 366 ~~dlvI~iS~SG~t~e~i~al~-~ak~~g 393 (636)
..++.+=.|...-|.++++++. .|++.+
T Consensus 96 ~~~l~~D~Sk~~i~~~~l~~L~~la~~~~ 124 (613)
T 2o2c_A 96 ENFLFLDYSKSHINDEIKCALLRLAEERG 124 (613)
T ss_dssp CCEEEEEEEESSCCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEecCCCCCHHHHHHHHHHHHhcC
Confidence 3478888888889999998873 455544
No 136
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A*
Probab=24.94 E-value=1.2e+02 Score=30.64 Aligned_cols=51 Identities=18% Similarity=0.098 Sum_probs=39.5
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCc---cccccCeeEEcC
Q 006659 365 YREDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSA---IARKTHCGVHIN 418 (636)
Q Consensus 365 ~~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~---La~~ad~~l~~~ 418 (636)
+.+++.|++=-|| + ...+++.||+.|..|++++.+.+.| -.+.+|..+...
T Consensus 15 ~~~~~~I~ilGs~-l--~~~l~~aAk~lG~~vi~vd~~~~~p~~~~~~~ad~~~~~d 68 (361)
T 2r7k_A 15 NKDEITIATLGSH-T--SLHILKGAKLEGFSTVCITMKGRDVPYKRFKVADKFIYVD 68 (361)
T ss_dssp CTTSCEEEEESST-T--HHHHHHHHHHTTCCEEEEECTTSCHHHHHTTCCSEEEECS
T ss_pred cccCCEEEEECcH-H--HHHHHHHHHHCCCEEEEEECCCCCCcccccccCceEEECC
Confidence 3445667777777 4 4558899999999999999998877 567888877665
No 137
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=24.81 E-value=1.8e+02 Score=23.58 Aligned_cols=38 Identities=24% Similarity=0.290 Sum_probs=28.1
Q ss_pred CCeEEEEeCCcchHHHHHHHHHHHhcCCeEEEEecCCCC
Q 006659 540 LPILVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDA 578 (636)
Q Consensus 540 ~~vi~l~~~~~~~~~~~~~~~~~~~~g~~v~vi~~~~~~ 578 (636)
.-++++.+.+ ..+-+.+++++.+++|..++++.++.+.
T Consensus 78 ldvvvivttd-dkewikdfieeakergvevfvvynnkdd 115 (162)
T 2l82_A 78 LDVVVIVTTD-DKEWIKDFIEEAKERGVEVFVVYNNKDD 115 (162)
T ss_dssp CCEEEEEECC-CHHHHHHHHHHHHHTTCEEEEEEECSCH
T ss_pred CcEEEEEecC-cHHHHHHHHHHHHhcCcEEEEEecCCCc
Confidence 3455555533 3567788999999999999999887653
No 138
>3dma_A Exopolyphosphatase-related protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.25A {Bacteroides fragilis}
Probab=24.60 E-value=5.3e+02 Score=25.60 Aligned_cols=109 Identities=10% Similarity=0.070 Sum_probs=63.4
Q ss_pred ccccchHHHHHHHcCCCeEEEEeec----hhHHHHHHHHHHHHHhcCCcEEEeeccchhcccCC---------C------
Q 006659 304 VLLGGLKDHLKTIRRSRRIVFIGCG----TSYNAALAARPILEELSDLPVTMEIASDLVDRQAP---------I------ 364 (636)
Q Consensus 304 l~~~~l~~~~~~l~~~~~I~i~G~G----~S~~aa~~~~~~~~~~~~~~~~~~~~~e~~~~~~~---------~------ 364 (636)
++.+.+.++.+.|++.++|+++|.= .+..++..+..+++++ +..+.+..+.+....... .
T Consensus 6 ~~~~~~~~l~~~i~~~~~i~I~~H~~pD~DaiGS~~~l~~~l~~~-g~~~~~~~~~~~~~~~~fl~~~~~i~~~~~~~~~ 84 (343)
T 3dma_A 6 IAQAHIDHFTKWFERADKIVIVSHVSPDGDAIGSSLGLYHFLDSQ-DKIVNVIVPNAFPDFLKWMPGSKDILLYDRYQEF 84 (343)
T ss_dssp SCHHHHHHHHHHHHHCSEEEEEECSSCCHHHHHHHHHHHHHHHHT-SCEEEEEESSCCCGGGTTSTTGGGCEETTTCHHH
T ss_pred cCHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHHHHHHc-CCCEEEECCCCCchHhhhccCcchhcccccChHH
Confidence 3456678888889999999999984 5566667777777775 555555444332110000 0
Q ss_pred -----CCCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEE
Q 006659 365 -----YREDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVH 416 (636)
Q Consensus 365 -----~~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~ 416 (636)
.+.+++|++-.+-.+. +-.......+.+..++.|=..+.+. ..+++.+.
T Consensus 85 ~~~~~~~~~lvi~VD~~~~~r-~~~~~~~l~~~~~~~ivIDHH~~~~--~~~~~~~i 138 (343)
T 3dma_A 85 ADKLIMEADVICCLDFNALKR-IDEMSDIVAASPGRKIMIDHHLYPE--DFCRITIS 138 (343)
T ss_dssp HHHHHHHCSEEEEESCSSGGG-GTTCHHHHHHCCSEEEEEECCSSCC--SCSSEEEE
T ss_pred HhhcccCCCEEEEEeCCChHH-hchhHHHHHhCCCCEEEEcCCCCCC--CCCceEEE
Confidence 1357888885443221 1112234455567777776665554 34666543
No 139
>1wiw_A Glucose-6-phosphate isomerase like protein; riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.80.1.1
Probab=24.42 E-value=1.3e+02 Score=29.36 Aligned_cols=99 Identities=12% Similarity=-0.051 Sum_probs=58.9
Q ss_pred chHHHHHHHcCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEeeccchh-cccCCCCC----CcEEEEEcCCCCCHHH
Q 006659 308 GLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIASDLV-DRQAPIYR----EDTAVFVSQSGETADT 382 (636)
Q Consensus 308 ~l~~~~~~l~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~e~~-~~~~~~~~----~dlvI~iS~SG~t~e~ 382 (636)
.-++++..|.+. ..++++. ....+|.-++..+.+..+.++......... .....-.+ +.+.+++-.+ ...+
T Consensus 152 pAK~LA~~L~~~-~Pvi~~~-~~~~~A~R~k~~l~enAk~~a~~~~~~Hne~~i~~~~~p~~~~~~~~~v~l~d--~~r~ 227 (290)
T 1wiw_A 152 PAKFLAYTLLER-LPLFYSP-LFRPLEGAVQTLFARVAKSLSLTPPPSALEFFLVGLEARHEQGDPLAAVLLGP--GEEA 227 (290)
T ss_dssp HHHHHHHHHTTS-EEEEECT-TCTHHHHHHHHHHHHTTCCCCBCCCSSHHHHHHHTTSSCGGGGTTEEEEEESC--SHHH
T ss_pred HHHHHHHHHhCC-CcEEEec-CcHHHHHHHHHHHHHhcCCCccccccccChhhhccccCccccccceEEEEecc--hhHH
Confidence 346777777664 4444555 777788999999999888877664421111 01122222 2344444444 4555
Q ss_pred HHHHHHHHHcCCeEEEEEcCCCCccccc
Q 006659 383 LQALEYASENGALCVGITNTVGSAIARK 410 (636)
Q Consensus 383 i~al~~ak~~g~~vi~IT~~~~s~La~~ 410 (636)
--+.+.+++++..+.-|....+|+|+++
T Consensus 228 ~~~~~i~~~~~~~v~~v~~~g~s~L~~l 255 (290)
T 1wiw_A 228 ALAKEILESRVDALAEVPATGANRLAQV 255 (290)
T ss_dssp HHHHHHHTTTSSEEEEECCCSSSHHHHH
T ss_pred HHHHHHHHhcCCceEEEeCCCCCHHHHH
Confidence 5555667778888888866555555554
No 140
>1w4r_A Thymidine kinase; type II, human, cytosolic, phosphorylation, transferase; HET: TTP; 1.83A {Homo sapiens} PDB: 1xbt_A* 2wvj_A* 2j87_A*
Probab=23.90 E-value=66 Score=29.57 Aligned_cols=38 Identities=11% Similarity=0.088 Sum_probs=32.0
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCc
Q 006659 369 TAVFVSQSGETADTLQALEYASENGALCVGITNTVGSA 406 (636)
Q Consensus 369 lvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~ 406 (636)
++.+-..||+|.++++++.....+|.+++.+|...+..
T Consensus 24 fiyG~MgsGKTt~Ll~~i~n~~~~~~kvl~~kp~~D~R 61 (195)
T 1w4r_A 24 VILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTR 61 (195)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEETTCCC
T ss_pred EEECCCCCcHHHHHHHHHHHHHHcCCeEEEEccccCcc
Confidence 44555789999999999999999999999999875554
No 141
>3iab_B Ribonucleases P/MRP protein subunit POP7; RNAse P, ribonuclease P, ribonuclease MRP, POP6, POP6P, POP7, POP7P, NME1, yeast, tRNA; 2.70A {Saccharomyces cerevisiae}
Probab=22.81 E-value=1.9e+02 Score=24.80 Aligned_cols=38 Identities=13% Similarity=0.217 Sum_probs=29.9
Q ss_pred CCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEeecc
Q 006659 318 RSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIAS 355 (636)
Q Consensus 318 ~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~ 355 (636)
..+.|++.|+|.+-.=|..++..|+.-.+..+.+...+
T Consensus 59 ~~~eV~v~GmGkAIeKal~lAl~fq~~~~~~V~V~T~T 96 (140)
T 3iab_B 59 GSSYVAVLGMGKAVEKTLALGCHFQDQKNKKIEVYTKT 96 (140)
T ss_dssp TCSEEEEEEEGGGHHHHHHHHHHHHHTTCCCEEEEEEE
T ss_pred CCcEEEEEechHHHHHHHHHHHHHhhcCCEEEEEEece
Confidence 57899999999998888888888888666666655443
No 142
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Probab=22.54 E-value=94 Score=30.92 Aligned_cols=51 Identities=14% Similarity=0.072 Sum_probs=40.3
Q ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEE
Q 006659 365 YREDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVH 416 (636)
Q Consensus 365 ~~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~ 416 (636)
.+-|++|++-.|+...-...+...++++|.+++.| |...++....+|+.|.
T Consensus 205 ~~aDllLViGTSL~V~Paa~l~~~a~~~G~~vviI-N~~~t~~d~~adl~i~ 255 (318)
T 3k35_A 205 RNADLSITLGTSLQIRPSGNLPLATKRRGGRLVIV-NLQPTKHDRHADLRIH 255 (318)
T ss_dssp HTCSEEEEESCCCCSTTGGGHHHHHHHTTCEEEEE-CSSCCTTGGGCSEEEC
T ss_pred hcCCEEEEEccCCCchhhhhhHHHHHhcCCEEEEE-CCCCCCCCCcccEEEe
Confidence 46789999999998777777778889999886655 4556788889998764
No 143
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=22.47 E-value=3.9e+02 Score=25.57 Aligned_cols=82 Identities=13% Similarity=0.037 Sum_probs=46.0
Q ss_pred cCCCeEEEEeCCCCHHHHHHHHHHHHHhcccccccccccccccccc---ccccCCCCeEEEEeCCc---chHHHHHHHHH
Q 006659 488 IAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPL---ALVDENLPILVIATRDA---CFSKQQSVIQQ 561 (636)
Q Consensus 488 ~~~~~~~~lG~G~~~~~A~e~alKl~E~~~~~a~~~~~~Ef~HGp~---~~~~~~~~vi~l~~~~~---~~~~~~~~~~~ 561 (636)
.+.++++++|-...-.+|...+++.-+.. .+. ..+.-+.-.+- .....+++++++-+... ..+..+++.+.
T Consensus 154 id~~ri~l~GfS~Gg~~a~~~a~~~p~~~--a~v-v~~sG~l~~~~~~~~~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~ 230 (285)
T 4fhz_A 154 LPPEALALVGFSQGTMMALHVAPRRAEEI--AGI-VGFSGRLLAPERLAEEARSKPPVLLVHGDADPVVPFADMSLAGEA 230 (285)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHSSSCC--SEE-EEESCCCSCHHHHHHHCCCCCCEEEEEETTCSSSCTHHHHHHHHH
T ss_pred CCccceEEEEeCHHHHHHHHHHHhCcccC--ceE-EEeecCccCchhhhhhhhhcCcccceeeCCCCCcCHHHHHHHHHH
Confidence 45678999888666666666666543321 111 11111111111 12245788888876533 24667777888
Q ss_pred HHhcCCeEEEE
Q 006659 562 LHARKGRLIVM 572 (636)
Q Consensus 562 ~~~~g~~v~vi 572 (636)
+++.|.++...
T Consensus 231 L~~~g~~~~~~ 241 (285)
T 4fhz_A 231 LAEAGFTTYGH 241 (285)
T ss_dssp HHHTTCCEEEE
T ss_pred HHHCCCCEEEE
Confidence 88888776543
No 144
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=22.09 E-value=81 Score=29.84 Aligned_cols=50 Identities=16% Similarity=0.062 Sum_probs=36.9
Q ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEc
Q 006659 367 EDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHI 417 (636)
Q Consensus 367 ~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~ 417 (636)
-|++|++-.|+.+.-...+.+.++++|+++|.|-.. .+++...+|+.|.-
T Consensus 168 adl~lviGTSl~V~Pa~~l~~~a~~~g~~~i~iN~~-~t~~~~~~~~~i~~ 217 (235)
T 1s5p_A 168 ADIFIAIGTSGHVYPAAGFVHEAKLHGAHTVELNLE-PSQVGNEFAEKYYG 217 (235)
T ss_dssp CSEEEEESCCTTEETGGGHHHHHHHTTCEEEEEESS-SCC---CCSEEEES
T ss_pred CCEEEEECcCCchhhHHHHHHHHHHcCCeEEEEECC-CCCCCccccEEEeC
Confidence 489999998888766677788899999998877654 56777788877654
No 145
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A*
Probab=21.69 E-value=83 Score=30.53 Aligned_cols=51 Identities=8% Similarity=-0.001 Sum_probs=40.0
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCccccccCeeEEc
Q 006659 366 REDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSAIARKTHCGVHI 417 (636)
Q Consensus 366 ~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~La~~ad~~l~~ 417 (636)
+-|++|++-.|+...-...++..++++|++++.|-. ..+++...+|+.|.-
T Consensus 212 ~aDl~lviGTSl~V~Paa~l~~~a~~~g~~~v~IN~-~~t~~d~~~~~~i~g 262 (273)
T 3riy_A 212 HCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNT-ETTPATNRFRFHFQG 262 (273)
T ss_dssp HCSEEEEESCCSCEETGGGHHHHHHHTTCCEEEEES-SCCTTGGGSSEEEES
T ss_pred cCCEEEEEeeCCcchhHHHhHHHHHHCCCEEEEECC-CCCCCCcceeEEEeC
Confidence 568999998888776666777788889998877754 477888889987754
No 146
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=21.27 E-value=1.1e+02 Score=28.93 Aligned_cols=41 Identities=17% Similarity=0.132 Sum_probs=37.0
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEEcCCCCc
Q 006659 366 REDTAVFVSQSGETADTLQALEYASENGALCVGITNTVGSA 406 (636)
Q Consensus 366 ~~dlvI~iS~SG~t~e~i~al~~ak~~g~~vi~IT~~~~s~ 406 (636)
..|++|.+|-.+-.+-.-.+=+..++.|.++|.||+.+.-.
T Consensus 64 ~pDfvI~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~p~~K 104 (283)
T 1qv9_A 64 EPDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIGDAPGLK 104 (283)
T ss_dssp CCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEEGGGGG
T ss_pred CCCEEEEECCCCCCCCchHHHHHHHhCCCCEEEEcCCcchh
Confidence 46899999999999999999999999999999999987655
No 147
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=20.43 E-value=91 Score=25.46 Aligned_cols=27 Identities=26% Similarity=0.187 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHcCCeEEEEEcCCCCc
Q 006659 380 ADTLQALEYASENGALCVGITNTVGSA 406 (636)
Q Consensus 380 ~e~i~al~~ak~~g~~vi~IT~~~~s~ 406 (636)
+.+.++++.++++|.+++.+|+.....
T Consensus 21 ~~~~~~l~~L~~~G~~~~i~S~~~~~~ 47 (137)
T 2pr7_A 21 RRWRNLLAAAKKNGVGTVILSNDPGGL 47 (137)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSCCGG
T ss_pred ccHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 557889999999999999999975443
No 148
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=20.35 E-value=2.1e+02 Score=30.51 Aligned_cols=85 Identities=13% Similarity=0.052 Sum_probs=46.7
Q ss_pred cCCCeEEEEeechhHHHHHHHHHHHHHhcCCcEEEeeccch------h----------cccCCC-CCCcEEEEE-cCCCC
Q 006659 317 RRSRRIVFIGCGTSYNAALAARPILEELSDLPVTMEIASDL------V----------DRQAPI-YREDTAVFV-SQSGE 378 (636)
Q Consensus 317 ~~~~~I~i~G~G~S~~aa~~~~~~~~~~~~~~~~~~~~~e~------~----------~~~~~~-~~~dlvI~i-S~SG~ 378 (636)
-+.++|+|+|.|.+...+ ++.++.+ .|..+...+.... + +....+ ..-|+||.- ..+-.
T Consensus 17 ~~~~~i~~iGiGg~Gms~--lA~~l~~-~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~~~~~~d~vV~Spgi~~~ 93 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGS--LALLARA-LGHTVTGSDANIYPPMSTQLEQAGVTIEEGYLIAHLQPAPDLVVVGNAMKRG 93 (524)
T ss_dssp --CCEEEEETTTSHHHHH--HHHHHHH-TTCEEEEEESCCCTTHHHHHHHTTCEEEESCCGGGGCSCCSEEEECTTCCTT
T ss_pred ecCCEEEEEEecHhhHHH--HHHHHHh-CCCEEEEECCCCCcHHHHHHHHCCCEEECCCCHHHcCCCCCEEEECCCcCCC
Confidence 357899999999997532 2344444 4666666554321 0 011112 223555543 34566
Q ss_pred CHHHHHHHHH-----------HHH--cCCeEEEEEcCCC
Q 006659 379 TADTLQALEY-----------ASE--NGALCVGITNTVG 404 (636)
Q Consensus 379 t~e~i~al~~-----------ak~--~g~~vi~IT~~~~ 404 (636)
++++.++.+. ++. ++.++|+||++.+
T Consensus 94 ~p~l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnG 132 (524)
T 3hn7_A 94 MDVIEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHG 132 (524)
T ss_dssp SHHHHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSC
T ss_pred CHHHHHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCC
Confidence 7777666542 221 3568999997644
No 149
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=20.34 E-value=2.7e+02 Score=23.38 Aligned_cols=33 Identities=18% Similarity=0.038 Sum_probs=24.8
Q ss_pred cEEEEEcCCCCCHHHHHHHHH-HHHcCCeEEEEE
Q 006659 368 DTAVFVSQSGETADTLQALEY-ASENGALCVGIT 400 (636)
Q Consensus 368 dlvI~iS~SG~t~e~i~al~~-ak~~g~~vi~IT 400 (636)
-+++-.|.+|+|..+.+.+.. +.+.|+.+..+.
T Consensus 4 i~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~ 37 (147)
T 2hna_A 4 ITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLH 37 (147)
T ss_dssp EEEECCTTSCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEEEECCchHHHHHHHHHHHHHHHCCCceEEec
Confidence 467778999999999987765 556677766553
No 150
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=20.10 E-value=3.6e+02 Score=22.84 Aligned_cols=82 Identities=17% Similarity=0.098 Sum_probs=45.9
Q ss_pred HcCCCeEEEEeechh-HHHHHHHHHHHHHhcCCcEEEeeccch------hcc-cCCC-CCCcEEEEEcCCCCCHHHHHHH
Q 006659 316 IRRSRRIVFIGCGTS-YNAALAARPILEELSDLPVTMEIASDL------VDR-QAPI-YREDTAVFVSQSGETADTLQAL 386 (636)
Q Consensus 316 l~~~~~I~i~G~G~S-~~aa~~~~~~~~~~~~~~~~~~~~~e~------~~~-~~~~-~~~dlvI~iS~SG~t~e~i~al 386 (636)
+.+.++|.++|.+.. ...+......+.+ .+..+...++..- .+. ...+ .+-|++|++.-. ..+.+++
T Consensus 19 l~~p~~iaVVGas~~~g~~G~~~~~~l~~-~G~~v~~Vnp~~~~i~G~~~y~sl~~l~~~vDlvvi~vp~---~~~~~vv 94 (144)
T 2d59_A 19 LTRYKKIALVGASPKPERDANIVMKYLLE-HGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFVKP---KLTMEYV 94 (144)
T ss_dssp HHHCCEEEEETCCSCTTSHHHHHHHHHHH-TTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECSCH---HHHHHHH
T ss_pred HcCCCEEEEEccCCCCCchHHHHHHHHHH-CCCEEEEECCCCCeECCeeccCCHHHcCCCCCEEEEEeCH---HHHHHHH
Confidence 445799999999632 1123333233444 3555655555321 010 1111 244777666433 6778888
Q ss_pred HHHHHcCCeEEEEEc
Q 006659 387 EYASENGALCVGITN 401 (636)
Q Consensus 387 ~~ak~~g~~vi~IT~ 401 (636)
+.+-+.|++.+.++.
T Consensus 95 ~~~~~~gi~~i~~~~ 109 (144)
T 2d59_A 95 EQAIKKGAKVVWFQY 109 (144)
T ss_dssp HHHHHHTCSEEEECT
T ss_pred HHHHHcCCCEEEECC
Confidence 888899998876653
Done!